Query         012961
Match_columns 452
No_of_seqs    645 out of 3281
Neff          7.1 
Searched_HMMs 13730
Date          Mon Mar 25 19:35:23 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012961.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/012961hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1vl5a_ c.66.1.41 (A:) Hypothe  99.8 1.3E-18 9.1E-23  162.1  15.0  135  215-350    15-167 (231)
  2 d1xxla_ c.66.1.41 (A:) Hypothe  99.7 1.5E-17 1.1E-21  155.9  16.4  144  195-349     4-167 (234)
  3 d2o57a1 c.66.1.18 (A:16-297) P  99.7 6.8E-17   5E-21  155.7  14.0  136  215-352    67-220 (282)
  4 d1p91a_ c.66.1.33 (A:) rRNA me  99.7   2E-17 1.4E-21  159.0   8.8  115  188-320    66-180 (268)
  5 d1kpga_ c.66.1.18 (A:) CmaA1 {  99.7   6E-18 4.4E-22  164.3   3.9  207  185-407    40-281 (285)
  6 d1vlma_ c.66.1.41 (A:) Possibl  99.7 1.4E-16 9.9E-21  146.1  12.5  123  218-350    39-176 (208)
  7 d2avna1 c.66.1.41 (A:1-246) Hy  99.7 8.6E-17 6.2E-21  150.1  11.0  100  216-319    43-142 (246)
  8 d2ex4a1 c.66.1.42 (A:2-224) Ad  99.7 7.9E-17 5.7E-21  149.9  10.6  132  214-351    59-206 (222)
  9 d1kpia_ c.66.1.18 (A:) CmaA2 {  99.7 6.4E-18 4.7E-22  164.5   3.1  207  185-407    39-287 (291)
 10 d1ve3a1 c.66.1.43 (A:2-227) Hy  99.7   1E-16 7.6E-21  147.6  11.2  100  217-318    39-142 (226)
 11 d1nkva_ c.66.1.21 (A:) Hypothe  99.7 1.5E-16 1.1E-20  150.1  11.8  147  191-348    17-181 (245)
 12 d2fk8a1 c.66.1.18 (A:22-301) M  99.7 1.8E-17 1.3E-21  160.6   4.7  190  215-411    52-275 (280)
 13 d2p7ia1 c.66.1.41 (A:22-246) H  99.6 5.4E-16 3.9E-20  144.5  12.2  138  216-361    21-184 (225)
 14 d1xtpa_ c.66.1.42 (A:) Hypothe  99.6 1.9E-16 1.3E-20  151.0   7.5  130  215-350    93-237 (254)
 15 d2gh1a1 c.66.1.49 (A:13-293) M  99.6 2.7E-15 1.9E-19  144.8  12.2  102  215-319    27-133 (281)
 16 d1wzna1 c.66.1.43 (A:1-251) Hy  99.6 3.7E-15 2.7E-19  139.9  11.8  103  215-319    41-147 (251)
 17 d1y8ca_ c.66.1.43 (A:) Putativ  99.5 1.8E-14 1.3E-18  135.4  10.7  101  215-317    37-142 (246)
 18 d1im8a_ c.66.1.14 (A:) Hypothe  99.5   5E-14 3.7E-18  130.7  13.4  102  215-319    39-149 (225)
 19 d1ri5a_ c.66.1.34 (A:) mRNA ca  99.5   2E-14 1.5E-18  135.9   8.7  139  215-355    24-214 (252)
 20 d1jqea_ c.66.1.19 (A:) Histami  99.5   5E-14 3.6E-18  134.9   8.8  136  213-349    38-207 (280)
 21 d2i6ga1 c.66.1.44 (A:1-198) Pu  99.5 9.6E-14   7E-18  126.3  10.3   99  217-318    32-135 (198)
 22 d2nxca1 c.66.1.39 (A:1-254) Pr  99.4 1.8E-13 1.3E-17  130.1  11.5  122  215-350   120-243 (254)
 23 d1g8sa_ c.66.1.3 (A:) Fibrilla  99.4   2E-13 1.5E-17  127.9  10.3  134  214-350    73-212 (230)
 24 d1tw3a2 c.66.1.12 (A:99-351) C  99.4 8.3E-13 6.1E-17  124.9  14.6  132  214-350    79-235 (253)
 25 d1pjza_ c.66.1.36 (A:) Thiopur  99.4 1.3E-13 9.8E-18  123.3   8.0  100  215-318    20-139 (201)
 26 d2a14a1 c.66.1.15 (A:5-261) In  99.4 6.5E-14 4.7E-18  131.7   6.1  135  215-351    51-234 (257)
 27 d1l3ia_ c.66.1.22 (A:) Precorr  99.4 1.7E-12 1.2E-16  117.2  13.8  138  187-345    13-154 (186)
 28 d1zx0a1 c.66.1.16 (A:8-236) Gu  99.4 1.6E-13 1.1E-17  128.2   6.9  144  192-349    39-201 (229)
 29 d1dusa_ c.66.1.4 (A:) Hypothet  99.4 1.6E-12 1.2E-16  118.0  11.5  133  175-317    19-157 (194)
 30 d2fcaa1 c.66.1.53 (A:10-213) t  99.3 4.3E-12 3.1E-16  116.6  12.2  120  218-347    32-166 (204)
 31 d1nt2a_ c.66.1.3 (A:) Fibrilla  99.3 3.6E-12 2.6E-16  117.5  11.6  133  215-350    56-193 (209)
 32 d1xvaa_ c.66.1.5 (A:) Glycine   99.3 5.5E-13   4E-17  128.6   6.1  116  193-318    42-175 (292)
 33 d2bzga1 c.66.1.36 (A:17-245) T  99.3   3E-12 2.2E-16  119.1  10.4  143  193-348    31-201 (229)
 34 d1qzza2 c.66.1.12 (A:102-357)   99.3 8.2E-12   6E-16  118.4  13.1  131  215-350    81-237 (256)
 35 d2g72a1 c.66.1.15 (A:18-280) P  99.3 1.2E-12 8.5E-17  124.7   6.4  134  215-350    54-238 (263)
 36 d1yzha1 c.66.1.53 (A:8-211) tR  99.2 5.2E-11 3.8E-15  109.2  14.5  121  218-347    34-168 (204)
 37 d1i9ga_ c.66.1.13 (A:) Probabl  99.2 1.4E-11   1E-15  117.3  10.8  131  196-347    85-223 (264)
 38 d1dl5a1 c.66.1.7 (A:1-213) Pro  99.2 3.2E-11 2.3E-15  111.3   9.8  110  193-317    61-175 (213)
 39 d1yb2a1 c.66.1.13 (A:6-255) Hy  99.1   4E-11 2.9E-15  113.3   9.5  120  215-349    85-210 (250)
 40 d1g8aa_ c.66.1.3 (A:) Fibrilla  99.1 1.5E-10 1.1E-14  107.9  13.0  130  215-350    73-211 (227)
 41 d1o54a_ c.66.1.13 (A:) Hypothe  99.1 1.9E-10 1.4E-14  109.6  11.5  130  196-349    92-228 (266)
 42 d2fyta1 c.66.1.6 (A:238-548) P  99.1 1.4E-10 9.9E-15  112.6  10.4   97  215-314    35-139 (311)
 43 d1nw3a_ c.66.1.31 (A:) Catalyt  99.0   1E-10 7.5E-15  114.7   7.9  121  187-317   131-266 (328)
 44 d1g6q1_ c.66.1.6 (1:) Arginine  99.0 1.8E-10 1.3E-14  112.7   9.6   97  216-314    39-142 (328)
 45 d1i1na_ c.66.1.7 (A:) Protein-  99.0 1.8E-10 1.3E-14  107.1   8.1   96  215-317    76-181 (224)
 46 d1oria_ c.66.1.6 (A:) Protein   99.0   3E-10 2.2E-14  110.6   9.3   96  216-314    34-137 (316)
 47 d2b3ta1 c.66.1.30 (A:2-275) N5  98.9 3.9E-09 2.9E-13  100.6  14.4  123  215-348   108-259 (274)
 48 d2b25a1 c.66.1.13 (A:6-329) Hy  98.9 1.8E-09 1.3E-13  105.4  11.9  121  215-349    98-238 (324)
 49 d2frna1 c.66.1.47 (A:19-278) H  98.9 7.9E-09 5.8E-13   97.8  13.9  158  173-349    75-237 (260)
 50 d1vbfa_ c.66.1.7 (A:) Protein-  98.9 2.4E-09 1.8E-13   99.2   9.3   94  215-317    70-165 (224)
 51 d1u2za_ c.66.1.31 (A:) Catalyt  98.7 7.5E-09 5.5E-13  103.7   8.0  121  187-317   196-333 (406)
 52 d1jg1a_ c.66.1.7 (A:) Protein-  98.7 1.9E-08 1.4E-12   92.4   9.9  109  194-317    65-176 (215)
 53 d1r18a_ c.66.1.7 (A:) Protein-  98.7 1.4E-08 9.9E-13   94.0   7.1   96  215-317    80-190 (223)
 54 d1wxxa2 c.66.1.51 (A:65-382) H  98.7 1.8E-08 1.3E-12   98.0   8.2  126  216-345   146-286 (318)
 55 d1af7a2 c.66.1.8 (A:92-284) Ch  98.6 4.7E-08 3.4E-12   88.1   9.8  103  215-318    24-172 (193)
 56 d1fp1d2 c.66.1.12 (D:129-372)   98.6 8.1E-08 5.9E-12   89.8  11.8  124  214-348    80-229 (244)
 57 d2as0a2 c.66.1.51 (A:73-396) H  98.6 6.7E-08 4.9E-12   94.1   9.5  125  216-345   146-288 (324)
 58 d2b78a2 c.66.1.51 (A:69-385) H  98.5 4.2E-07   3E-11   88.1  11.9  129  216-348   145-291 (317)
 59 d1fp2a2 c.66.1.12 (A:109-352)   98.4 2.8E-07   2E-11   86.0  10.1  125  215-350    80-232 (244)
 60 d1kyza2 c.66.1.12 (A:120-362)   98.4 2.7E-07   2E-11   85.9   8.4  125  215-349    81-231 (243)
 61 d2igta1 c.66.1.51 (A:1-309) Pu  98.3 1.5E-06 1.1E-10   83.7  11.9  130  215-346   132-278 (309)
 62 d1ne2a_ c.66.1.32 (A:) Hypothe  98.3 4.3E-07 3.2E-11   82.0   6.7   65  215-287    48-115 (197)
 63 d2esra1 c.66.1.46 (A:28-179) P  98.3 2.8E-07   2E-11   79.6   4.7  101  215-319    14-123 (152)
 64 d1ws6a1 c.66.1.46 (A:15-185) M  98.2 6.1E-07 4.5E-11   79.0   6.4   99  216-318    42-148 (171)
 65 d2h00a1 c.66.1.54 (A:5-254) Me  98.2   1E-05 7.4E-10   75.4  15.1  145  192-348    41-231 (250)
 66 d2avda1 c.66.1.1 (A:44-262) CO  98.2 1.5E-06 1.1E-10   79.7   8.4  112  191-318    46-170 (219)
 67 d1wy7a1 c.66.1.32 (A:4-204) Hy  98.2 6.1E-06 4.5E-10   74.4  12.3  121  215-350    46-171 (201)
 68 d2cl5a1 c.66.1.1 (A:3-216) Cat  98.2 6.4E-07 4.7E-11   81.9   5.4   95  216-315    57-166 (214)
 69 d1m6ya2 c.66.1.23 (A:2-114,A:2  98.0 3.4E-06 2.5E-10   75.7   7.4  102  215-317    23-141 (192)
 70 d2f8la1 c.66.1.45 (A:2-329) Hy  98.0 8.8E-06 6.4E-10   78.3   9.9  122  215-342   117-264 (328)
 71 d2ih2a1 c.66.1.27 (A:21-243) D  97.9 5.6E-06 4.1E-10   74.5   6.3  113  195-325     7-152 (223)
 72 d2fpoa1 c.66.1.46 (A:10-192) M  97.9 8.4E-06 6.1E-10   72.3   7.0  131  176-317    12-149 (183)
 73 d1susa1 c.66.1.1 (A:21-247) Ca  97.9   1E-05 7.4E-10   74.3   7.6  110  192-317    47-170 (227)
 74 d1nv8a_ c.66.1.30 (A:) N5-glut  97.9 3.8E-05 2.8E-09   72.2  11.7  118  216-343   111-253 (271)
 75 d1mjfa_ c.66.1.17 (A:) Putativ  97.9 6.7E-06 4.9E-10   77.8   6.3  102  215-319    72-192 (276)
 76 d2fhpa1 c.66.1.46 (A:1-182) Pu  97.8 3.2E-05 2.3E-09   68.4   9.2  130  177-318    11-152 (182)
 77 d1xj5a_ c.66.1.17 (A:) Spermid  97.6 0.00016 1.2E-08   68.5  10.9  121  215-345    80-219 (290)
 78 d1inla_ c.66.1.17 (A:) Spermid  97.6 6.2E-05 4.5E-09   71.6   7.8  106  215-321    89-208 (295)
 79 d1uira_ c.66.1.17 (A:) Spermid  97.5 8.5E-05 6.2E-09   71.2   8.4  124  215-347    77-222 (312)
 80 d1uwva2 c.66.1.40 (A:75-432) r  97.5  0.0011   8E-08   63.8  16.7  161  167-351   170-340 (358)
 81 d1qama_ c.66.1.24 (A:) rRNA ad  97.5 0.00023 1.7E-08   65.3  10.1   67  215-286    21-92  (235)
 82 d1yuba_ c.66.1.24 (A:) rRNA ad  97.3 3.3E-05 2.4E-09   71.6   2.5   79  195-286    17-100 (245)
 83 d1xdza_ c.66.1.20 (A:) Glucose  97.3 0.00073 5.3E-08   62.0  11.8  123  216-350    71-201 (239)
 84 d1ej0a_ c.66.1.2 (A:) RNA meth  97.3 0.00031 2.2E-08   61.8   8.7   91  215-317    22-136 (180)
 85 d2o07a1 c.66.1.17 (A:16-300) S  97.3 0.00014   1E-08   68.8   6.6  121  215-346    78-216 (285)
 86 d2b2ca1 c.66.1.17 (A:3-314) Sp  97.3 0.00016 1.2E-08   69.0   7.0  101  215-321   106-224 (312)
 87 d1iy9a_ c.66.1.17 (A:) Spermid  97.3  0.0002 1.4E-08   67.3   7.2  125  215-344    75-212 (274)
 88 d1jsxa_ c.66.1.20 (A:) Glucose  97.3 0.00039 2.8E-08   62.5   8.8   94  217-317    67-165 (207)
 89 d1ixka_ c.66.1.38 (A:) Hypothe  97.1 0.00061 4.4E-08   65.0   9.3  126  215-346   116-268 (313)
 90 d2bm8a1 c.66.1.50 (A:2-233) Ce  96.8 0.00071 5.2E-08   61.8   6.5   95  216-318    81-187 (232)
 91 d2okca1 c.66.1.45 (A:9-433) Ty  96.8  0.0013 9.2E-08   65.2   8.8  116  194-320   149-301 (425)
 92 d2ifta1 c.66.1.46 (A:11-193) P  96.8  0.0011 8.1E-08   58.0   6.9   98  217-318    45-154 (183)
 93 d1sqga2 c.66.1.38 (A:145-428)   96.7  0.0034 2.5E-07   58.7  10.6  125  215-345   102-254 (284)
 94 d2p41a1 c.66.1.25 (A:8-264) An  96.6   0.005 3.7E-07   56.3  10.4  119  217-346    68-199 (257)
 95 d1wg8a2 c.66.1.23 (A:5-108,A:2  96.3  0.0052 3.8E-07   53.7   8.4  119  215-346    18-152 (182)
 96 d1zq9a1 c.66.1.24 (A:36-313) P  95.9   0.021 1.5E-06   53.1  10.7   83  194-286     8-93  (278)
 97 d2ar0a1 c.66.1.45 (A:6-529) M.  95.6  0.0088 6.4E-07   60.6   7.6  118  194-321   151-311 (524)
 98 d1qyra_ c.66.1.24 (A:) High le  95.6  0.0065 4.7E-07   55.8   5.9   69  194-275     8-81  (252)
 99 d2b9ea1 c.66.1.38 (A:133-425)   95.5   0.033 2.4E-06   51.9  10.5  120  215-341    94-245 (293)
100 d2dula1 c.66.1.58 (A:3-377) N(  94.8   0.012 8.5E-07   57.2   5.2   97  216-318    46-163 (375)
101 d1m6ex_ c.66.1.35 (X:) Salicyl  94.8   0.042 3.1E-06   52.8   9.1   44  274-318   134-210 (359)
102 d1eg2a_ c.66.1.11 (A:) m.RsrI   94.1   0.042 3.1E-06   49.6   7.2   91  264-358     6-108 (279)
103 d1e3ja2 c.2.1.1 (A:143-312) Ke  93.0   0.092 6.7E-06   44.0   6.8   95  215-318    26-130 (170)
104 d1g60a_ c.66.1.11 (A:) Methylt  91.4    0.11 8.3E-06   45.9   5.8   83  265-360     7-104 (256)
105 d1yb5a2 c.2.1.1 (A:121-294) Qu  91.4   0.092 6.7E-06   44.3   4.9   90  215-317    28-127 (174)
106 d1piwa2 c.2.1.1 (A:153-320) Ci  91.1   0.015 1.1E-06   49.5  -0.7   96  215-317    27-124 (168)
107 d1vj0a2 c.2.1.1 (A:156-337) Hy  90.5    0.17 1.3E-05   42.8   5.9   94  215-317    28-131 (182)
108 d1jqba2 c.2.1.1 (A:1140-1313)   88.1    0.27   2E-05   41.6   5.2   93  215-317    27-127 (174)
109 d1llua2 c.2.1.1 (A:144-309) Al  86.2    0.21 1.6E-05   41.4   3.4   92  215-317    27-124 (166)
110 d1uufa2 c.2.1.1 (A:145-312) Hy  82.4    0.31 2.2E-05   40.7   2.6   94  215-317    30-124 (168)
111 d1kola2 c.2.1.1 (A:161-355) Fo  82.0     1.3 9.6E-05   37.8   6.8   99  215-317    25-140 (195)
112 d1rjwa2 c.2.1.1 (A:138-305) Al  81.2    0.48 3.5E-05   39.0   3.4   91  215-317    27-124 (168)
113 d1pl8a2 c.2.1.1 (A:146-316) Ke  79.8     0.8 5.9E-05   38.0   4.5   94  215-318    26-129 (171)
114 d1g55a_ c.66.1.26 (A:) DNMT2 {  79.8     1.9 0.00014   39.2   7.6  126  217-348     3-146 (343)
115 d1i4wa_ c.66.1.24 (A:) Transcr  79.8     1.1 7.8E-05   41.7   5.8   73  194-271    24-100 (322)
116 d2uyoa1 c.66.1.57 (A:14-310) P  78.3      15  0.0011   33.0  13.5  104  216-319    90-207 (297)
117 d1e3ia2 c.2.1.1 (A:168-341) Al  78.2     1.4  0.0001   36.9   5.5   92  215-318    28-131 (174)
118 d1f8fa2 c.2.1.1 (A:163-336) Be  76.1    0.96   7E-05   37.7   3.9   90  215-317    28-127 (174)
119 d1pqwa_ c.2.1.1 (A:) Putative   75.0    0.91 6.6E-05   37.8   3.4   92  215-317    25-124 (183)
120 d1jvba2 c.2.1.1 (A:144-313) Al  74.1    0.79 5.8E-05   37.9   2.8   94  215-317    27-128 (170)
121 d1booa_ c.66.1.11 (A:) m.PvuII  72.0       2 0.00015   38.4   5.3   93  263-359    13-122 (320)
122 d2g5ca2 c.2.1.6 (A:30-200) Pre  71.5     4.8 0.00035   32.6   7.3   90  218-315     3-94  (171)
123 d1xa0a2 c.2.1.1 (A:119-294) B.  70.0    0.76 5.6E-05   38.9   1.7   91  216-319    32-130 (176)
124 d1qora2 c.2.1.1 (A:113-291) Qu  67.1     2.8  0.0002   34.4   4.8   90  215-317    28-127 (179)
125 d2oyra1 c.66.1.55 (A:1-250) Hy  67.0     2.4 0.00018   37.9   4.5   71  217-287    90-172 (250)
126 d1iz0a2 c.2.1.1 (A:99-269) Qui  66.2    0.31 2.3E-05   40.9  -1.8   91  215-317    27-120 (171)
127 d1pjca1 c.2.1.4 (A:136-303) L-  65.1    0.46 3.3E-05   40.3  -0.9   94  215-314    31-129 (168)
128 d1dcta_ c.66.1.26 (A:) DNA met  61.7      20  0.0014   31.4  10.1  127  218-349     2-141 (324)
129 d1v3va2 c.2.1.1 (A:113-294) Le  61.4     4.1  0.0003   33.7   4.8   93  215-317    29-128 (182)
130 d2c7pa1 c.66.1.26 (A:1-327) DN  59.0      23  0.0016   31.3  10.0  128  215-348    10-150 (327)
131 d1booa_ c.66.1.11 (A:) m.PvuII  57.1       5 0.00036   35.6   4.8   52  194-259   238-291 (320)
132 d1h2ba2 c.2.1.1 (A:155-326) Al  55.8     4.8 0.00035   32.9   4.2   95  215-318    32-132 (172)
133 d1tt7a2 c.2.1.1 (A:128-294) Hy  53.8     2.5 0.00018   35.1   1.9   87  218-317    26-120 (167)
134 d2f1ka2 c.2.1.6 (A:1-165) Prep  49.6      20  0.0015   28.4   7.2   87  218-316     2-90  (165)
135 d2jhfa2 c.2.1.1 (A:164-339) Al  48.7     9.3 0.00068   31.0   4.9   91  215-317    28-130 (176)
136 d2axtj1 f.23.32.1 (J:7-40) Pho  48.4      12 0.00091   22.2   3.9   18   18-35      9-26  (34)
137 d1g60a_ c.66.1.11 (A:) Methylt  46.6     9.9 0.00072   32.3   4.9   45  194-247   200-246 (256)
138 d1d1ta2 c.2.1.1 (A:163-338) Al  44.6     7.7 0.00056   32.0   3.6   91  215-317    29-131 (176)
139 d1p0fa2 c.2.1.1 (A:1164-1337)   44.0      13 0.00094   30.3   5.1   92  215-318    27-130 (174)
140 d1vj1a2 c.2.1.1 (A:125-311) Pu  43.1      16  0.0012   30.0   5.6   89  216-317    31-130 (187)
141 d1l7da1 c.2.1.4 (A:144-326) Ni  42.5     3.2 0.00023   35.3   0.7   35  279-314   114-148 (183)
142 d1o89a2 c.2.1.1 (A:116-292) Hy  41.5       8 0.00058   32.1   3.3   89  217-318    33-127 (177)
143 d1cdoa2 c.2.1.1 (A:165-339) Al  39.9      12  0.0009   30.1   4.2   91  215-317    28-130 (175)
144 d1eg2a_ c.66.1.11 (A:) m.RsrI   38.7      22  0.0016   30.4   6.1   51  193-252   194-246 (279)
145 d1gu7a2 c.2.1.1 (A:161-349) 2,  37.6      32  0.0024   27.9   6.7   92  217-317    30-137 (189)
146 d1p3da1 c.5.1.1 (A:11-106) UDP  36.8      15  0.0011   27.1   3.9   67  213-288     5-76  (96)
147 d1zkda1 c.66.1.52 (A:2-366) Hy  33.9     5.9 0.00043   36.9   1.2   20  216-235    80-99  (365)
148 d2fzwa2 c.2.1.1 (A:163-338) Al  32.3      18  0.0013   29.0   4.0   91  215-317    28-129 (176)
149 d1whza_ d.50.3.2 (A:) Hypothet  26.6      37  0.0027   23.4   4.3   27  332-358     8-34  (70)
150 d1lssa_ c.2.1.9 (A:) Ktn Mja21  26.2 1.1E+02   0.008   22.7   7.8   90  218-314     2-96  (132)
151 d1j6ua1 c.5.1.1 (A:0-88) UDP-N  25.5      18  0.0013   26.4   2.5   62  218-288     3-69  (89)
152 d1bg6a2 c.2.1.6 (A:4-187) N-(1  21.1      96   0.007   24.0   6.7   34  278-315    71-104 (184)
153 d2hmva1 c.2.1.9 (A:7-140) Ktn   20.0 1.1E+02  0.0079   22.6   6.5   91  219-317     3-98  (134)

No 1  
>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}
Probab=99.77  E-value=1.3e-18  Score=162.06  Aligned_cols=135  Identities=13%  Similarity=0.197  Sum_probs=99.8

Q ss_pred             CCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccccc
Q 012961          215 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW  292 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~  292 (452)
                      +..+|||||||+|.++..|++.  .|+++|+++.++..+..........++.+.++|.+++|+++++||+|+|.. +++|
T Consensus        15 ~~~rVLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~~~~~~fD~v~~~~-~l~~   93 (231)
T d1vl5a_          15 GNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRI-AAHH   93 (231)
T ss_dssp             SCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEES-CGGG
T ss_pred             CcCEEEEecccCcHHHHHHHHhCCEEEEEECCHHHHhhhhhcccccccccccccccccccccccccccccccccc-cccc
Confidence            4458999999999999999874  566676666665554332333334568899999999999999999999988 6899


Q ss_pred             cccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCh-hhHH---------------HHHHHHHHHHhCCCEEEEEEe
Q 012961          293 LQRDGILLLELDRLLRPGGYFVYSSPEAYAHDP-ENRR---------------IWNAMYDLLKSMCWKIVSKKD  350 (452)
Q Consensus       293 ~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~-~~~~---------------~~~~l~~ll~~~Gf~~v~~~~  350 (452)
                      ++++..+++++.|+|||||++++.++....... ....               .-.++.++++++||++++.+.
T Consensus        94 ~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~  167 (231)
T d1vl5a_          94 FPNPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFELEELHC  167 (231)
T ss_dssp             CSCHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCEEEEEEE
T ss_pred             cCCHHHHHHHHHHhcCCCcEEEEEeCCCCCCHHHHHHHHHHHhhcccCcccCCCHHHHHHHHHHCCCEEEEEEE
Confidence            999999999999999999999997643211100 0000               014688899999998876553


No 2  
>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}
Probab=99.74  E-value=1.5e-17  Score=155.85  Aligned_cols=144  Identities=17%  Similarity=0.243  Sum_probs=105.0

Q ss_pred             HHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcC-CCeEEEEecCC
Q 012961          195 YILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTK  271 (452)
Q Consensus       195 y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg-~~~~~~~~d~~  271 (452)
                      ..+.+.+.+..        +++.+|||||||+|.++..|++.  +|+|+|+++.++..++ +.+...+ .++.+.++|++
T Consensus         4 ~~~~l~~~~~~--------~~~~rILDiGcGtG~~~~~la~~~~~v~gvD~S~~~l~~A~-~~~~~~~~~~~~~~~~d~~   74 (234)
T d1xxla_           4 SLGLMIKTAEC--------RAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVAS-SFAQEKGVENVRFQQGTAE   74 (234)
T ss_dssp             HHHHHHHHHTC--------CTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHH-HHHHHHTCCSEEEEECBTT
T ss_pred             HHHHHHHHhCC--------CCCCEEEEeCCcCcHHHHHHHHhCCeEEEEeCChhhhhhhh-hhhcccccccccccccccc
Confidence            44556666664        34568999999999999999874  5666666665554443 2333334 45889999999


Q ss_pred             CCCCCCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHH-----------------HHHHH
Q 012961          272 RLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRR-----------------IWNAM  334 (452)
Q Consensus       272 ~lp~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~-----------------~~~~l  334 (452)
                      ++|+++++||+|+|.. +++|++++..+++++.|+|||||+++++..... ..+....                 ...++
T Consensus        75 ~~~~~~~~fD~v~~~~-~l~~~~d~~~~l~~~~r~LkpgG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (234)
T d1xxla_          75 SLPFPDDSFDIITCRY-AAHHFSDVRKAVREVARVLKQDGRFLLVDHYAP-EDPVLDEFVNHLNRLRDPSHVRESSLSEW  152 (234)
T ss_dssp             BCCSCTTCEEEEEEES-CGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBC-SSHHHHHHHHHHHHHHCTTCCCCCBHHHH
T ss_pred             cccccccccceeeeec-eeecccCHHHHHHHHHHeeCCCcEEEEEEcCCC-CCHHHHHHHHHHHhhCCCcccccCCHHHH
Confidence            9999999999999988 688999999999999999999999999753221 1111000                 11367


Q ss_pred             HHHHHhCCCEEEEEE
Q 012961          335 YDLLKSMCWKIVSKK  349 (452)
Q Consensus       335 ~~ll~~~Gf~~v~~~  349 (452)
                      ..++++.||.+....
T Consensus       153 ~~~~~~~gf~~~~~~  167 (234)
T d1xxla_         153 QAMFSANQLAYQDIQ  167 (234)
T ss_dssp             HHHHHHTTEEEEEEE
T ss_pred             HHHHHHCCCceeEEE
Confidence            888999999876543


No 3  
>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}
Probab=99.69  E-value=6.8e-17  Score=155.70  Aligned_cols=136  Identities=16%  Similarity=0.223  Sum_probs=101.1

Q ss_pred             CCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcC--CCeEEEEecCCCCCCCCCCceEEEecccc
Q 012961          215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRCR  289 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg--~~~~~~~~d~~~lp~~d~sFDlVv~s~~~  289 (452)
                      +..+|||||||+|.++..|+++   .|+++|+++.++..+. +.+...+  .++.+..+|+.++|+++++||+|+|.. +
T Consensus        67 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~i~~a~-~~~~~~gl~~~v~~~~~d~~~l~~~~~sfD~V~~~~-~  144 (282)
T d2o57a1          67 RQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNE-EYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQD-A  144 (282)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHH-HHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEES-C
T ss_pred             CCCEEEEeCCCCcHHHhhhhccCCcEEEEEeccchhhhhhh-cccccccccccccccccccccccccccccchhhccc-h
Confidence            4569999999999999999863   4666666665554443 2222334  358899999999999999999999887 6


Q ss_pred             ccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCC-Chhh-HH-----------HHHHHHHHHHhCCCEEEEEEece
Q 012961          290 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAH-DPEN-RR-----------IWNAMYDLLKSMCWKIVSKKDQT  352 (452)
Q Consensus       290 l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~-~~~~-~~-----------~~~~l~~ll~~~Gf~~v~~~~~~  352 (452)
                      ++|++++..+++++.|+|||||+|++.++..... .... ..           ....+.++++++||..+...+..
T Consensus       145 l~h~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~Gf~~i~~~d~~  220 (282)
T d2o57a1         145 FLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRTFSRP  220 (282)
T ss_dssp             GGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEEEEECH
T ss_pred             hhhccCHHHHHHHHHHhcCCCcEEEEEEeecCCCCchhHHHHHHHHhccCCCCCHHHHHHHHHHcCCceEEEEECc
Confidence            8888999999999999999999999986522110 1110 00           12467889999999988777653


No 4  
>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}
Probab=99.68  E-value=2e-17  Score=158.96  Aligned_cols=115  Identities=23%  Similarity=0.337  Sum_probs=89.4

Q ss_pred             CcccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEE
Q 012961          188 FHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGV  267 (452)
Q Consensus       188 f~~~~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~  267 (452)
                      +....+.....+.+.++         .++.+|||||||+|.++..|++.. ....+.+.|+++.+++.|+++..++.+.+
T Consensus        66 ~~~l~~~~~~~l~~~~~---------~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~  135 (268)
T d1p91a_          66 YQPLRDAIVAQLRERLD---------DKATAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRYPQVTFCV  135 (268)
T ss_dssp             THHHHHHHHHHHHHHSC---------TTCCEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHCTTSEEEE
T ss_pred             hHHHHHHHHHHHHHhcC---------CCCCEEEEeCCCCcHHHHHHHHHC-CCCEEEEecchHhhhhhhhccccccccee
Confidence            34444555555555554         245689999999999999998751 23344555677778888888888899999


Q ss_pred             ecCCCCCCCCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012961          268 LGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEA  320 (452)
Q Consensus       268 ~d~~~lp~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~  320 (452)
                      +|+.++|+++++||+|++... +++       ++|+.|+|||||++++++|..
T Consensus       136 ~d~~~l~~~~~sfD~v~~~~~-~~~-------~~e~~rvLkpgG~l~~~~p~~  180 (268)
T d1p91a_         136 ASSHRLPFSDTSMDAIIRIYA-PCK-------AEELARVVKPGGWVITATPGP  180 (268)
T ss_dssp             CCTTSCSBCTTCEEEEEEESC-CCC-------HHHHHHHEEEEEEEEEEEECT
T ss_pred             eehhhccCCCCCEEEEeecCC-HHH-------HHHHHHHhCCCcEEEEEeeCC
Confidence            999999999999999998773 443       688999999999999998764


No 5  
>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.67  E-value=6e-18  Score=164.25  Aligned_cols=207  Identities=9%  Similarity=0.062  Sum_probs=137.3

Q ss_pred             CCCCcccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHc----C
Q 012961          185 GTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----G  260 (452)
Q Consensus       185 g~~f~~~~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~r----g  260 (452)
                      .........+..+.+.+.+.+        +++.+|||||||+|.++.++++.  .++.+.++.+|+.+++.|+++    +
T Consensus        40 ~~tL~eAQ~~k~~~~~~~l~l--------~~G~~VLDiGCG~G~~a~~~a~~--~g~~v~git~s~~Q~~~a~~~~~~~g  109 (285)
T d1kpga_          40 DMTLQEAQIAKIDLALGKLGL--------QPGMTLLDVGCGWGATMMRAVEK--YDVNVVGLTLSKNQANHVQQLVANSE  109 (285)
T ss_dssp             TCCHHHHHHHHHHHHHTTTTC--------CTTCEEEEETCTTSHHHHHHHHH--HCCEEEEEESCHHHHHHHHHHHHTCC
T ss_pred             CCCHHHHHHHHHHHHHHHcCC--------CCCCEEEEecCcchHHHHHHHhc--CCcceEEEeccHHHHHHHHHHHHhhh
Confidence            333444444555555555543        35569999999999999999874  234444455555555555443    3


Q ss_pred             --CCeEEEEecCCCCCCCCCCceEEEecccccccc--ccHHHHHHHHHHhcCCCcEEEEEeCCC------CCC---Chhh
Q 012961          261 --IPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL--QRDGILLLELDRLLRPGGYFVYSSPEA------YAH---DPEN  327 (452)
Q Consensus       261 --~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~--~d~~~~L~ei~RvLkPGG~lvi~~p~~------~~~---~~~~  327 (452)
                        .++.+...|...++   ++||.|++.. .++|+  .+...+++++.|+|||||.+++.+...      ..+   ....
T Consensus       110 ~~~~v~~~~~d~~~~~---~~fD~i~si~-~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~~i~~~~~~~~~~~~~~~~~~  185 (285)
T d1kpga_         110 NLRSKRVLLAGWEQFD---EPVDRIVSIG-AFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFT  185 (285)
T ss_dssp             CCSCEEEEESCGGGCC---CCCSEEEEES-CGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHH
T ss_pred             hhhhhHHHHhhhhccc---ccccceeeeh-hhhhcCchhHHHHHHHHHhhcCCCCcEEEEEEeccCchhhccccCCcchh
Confidence              34678888887775   6799999888 46666  344789999999999999999865321      000   0000


Q ss_pred             -------H----------HHHHHHHHHHHhCCCEEEEEEeceeEeecccchhhHhhhCCCCCCCcccC-CCCcchhhhhc
Q 012961          328 -------R----------RIWNAMYDLLKSMCWKIVSKKDQTVIWAKPISNSCYLKRVPGSRPPLCSS-DDDPDVTWNVL  389 (452)
Q Consensus       328 -------~----------~~~~~l~~ll~~~Gf~~v~~~~~~~iw~kp~~~~~~~~r~~~~~p~lc~~-~~~~~~~wy~~  389 (452)
                             .          ....++..++++.||+++..++....+.+++..+...+++..  +.+... +++....|..+
T Consensus       186 ~~~~~~fi~kyiFpgg~lPsl~~~~~~~e~agf~v~~~~~~~~hYarTl~~W~~~f~~~~--~ei~~~~~~~~~rrw~~Y  263 (285)
T d1kpga_         186 FARFLKFIVTEIFPGGRLPSIPMVQECASANGFTVTRVQSLQPHYAKTLDLWSAALQANK--GQAIALQSEEVYERYMKY  263 (285)
T ss_dssp             HHHHHHHHHHHTSTTCCCCCHHHHHHHHHTTTCEEEEEEECHHHHHHHHHHHHHHHHHTH--HHHHHHSCHHHHHHHHHH
T ss_pred             hhchhhHHHHHhccCCCCCChhhHHHHHHHhchhhcccccchhhHHHHHHHHHHHHHHHH--HHHHHhcCHHHHHHHHHH
Confidence                   0          012477788999999999999988888888887766555421  122222 34455679999


Q ss_pred             ccccccccccCcccccCc
Q 012961          390 MKACISPYSAKMHHEKGT  407 (452)
Q Consensus       390 l~~C~~~~~~~~~~~~~~  407 (452)
                      |.+|...|..+.....+.
T Consensus       264 l~~c~~~F~~g~~~v~q~  281 (285)
T d1kpga_         264 LTGCAEMFRIGYIDVNQF  281 (285)
T ss_dssp             HHHHHHHHHTTSEEEEEE
T ss_pred             HHHHHHHHHCCCCeEEEE
Confidence            999998887766544443


No 6  
>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}
Probab=99.67  E-value=1.4e-16  Score=146.12  Aligned_cols=123  Identities=20%  Similarity=0.248  Sum_probs=97.2

Q ss_pred             EEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccccccccHH
Q 012961          218 NVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDG  297 (452)
Q Consensus       218 ~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~d~~  297 (452)
                      +|||||||+|.++..+..  ++|+|+     ++.+++.|+++  ++.+.++|.+++++++++||+|+|.. +++|++++.
T Consensus        39 ~vLDiGcG~G~~~~~~~~--~~giD~-----s~~~~~~a~~~--~~~~~~~d~~~l~~~~~~fD~I~~~~-~l~h~~d~~  108 (208)
T d1vlma_          39 RGVEIGVGTGRFAVPLKI--KIGVEP-----SERMAEIARKR--GVFVLKGTAENLPLKDESFDFALMVT-TICFVDDPE  108 (208)
T ss_dssp             CEEEETCTTSTTHHHHTC--CEEEES-----CHHHHHHHHHT--TCEEEECBTTBCCSCTTCEEEEEEES-CGGGSSCHH
T ss_pred             eEEEECCCCcccccccce--EEEEeC-----Chhhccccccc--cccccccccccccccccccccccccc-ccccccccc
Confidence            699999999999988854  567755     55666777776  46889999999999999999999988 799999999


Q ss_pred             HHHHHHHHhcCCCcEEEEEeCCCCCCCh-------------hhH--HHHHHHHHHHHhCCCEEEEEEe
Q 012961          298 ILLLELDRLLRPGGYFVYSSPEAYAHDP-------------ENR--RIWNAMYDLLKSMCWKIVSKKD  350 (452)
Q Consensus       298 ~~L~ei~RvLkPGG~lvi~~p~~~~~~~-------------~~~--~~~~~l~~ll~~~Gf~~v~~~~  350 (452)
                      .+++++.|+|+|||.+++..+.......             ...  ..-+++.++++++||+.++...
T Consensus       109 ~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~~~Gf~~i~v~~  176 (208)
T d1vlma_         109 RALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQ  176 (208)
T ss_dssp             HHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred             cchhhhhhcCCCCceEEEEecCCcchhHHhhhhccccccccccccCCCHHHHHHHHHHcCCeEEEEEE
Confidence            9999999999999999998875421000             000  0125789999999999876543


No 7  
>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}
Probab=99.67  E-value=8.6e-17  Score=150.12  Aligned_cols=100  Identities=21%  Similarity=0.400  Sum_probs=86.0

Q ss_pred             CCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccccccccc
Q 012961          216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR  295 (452)
Q Consensus       216 ~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~d  295 (452)
                      ..+|||||||+|.++..|++.   +.++.+.|+++.+++.|++++.. .+..++++++++++++||+|+|...++||+++
T Consensus        43 ~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~l~~a~~~~~~-~~~~~~~~~l~~~~~~fD~ii~~~~~~~~~~d  118 (246)
T d2avna1          43 PCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGVK-NVVEAKAEDLPFPSGAFEAVLALGDVLSYVEN  118 (246)
T ss_dssp             CCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTCS-CEEECCTTSCCSCTTCEEEEEECSSHHHHCSC
T ss_pred             CCEEEEECCCCchhccccccc---ceEEEEeeccccccccccccccc-ccccccccccccccccccceeeecchhhhhhh
Confidence            458999999999999999985   34566667777888888888654 35678999999999999999987778999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCC
Q 012961          296 DGILLLELDRLLRPGGYFVYSSPE  319 (452)
Q Consensus       296 ~~~~L~ei~RvLkPGG~lvi~~p~  319 (452)
                      +..+|+++.|+|||||+++++.+.
T Consensus       119 ~~~~l~~i~r~Lk~gG~~ii~~~~  142 (246)
T d2avna1         119 KDKAFSEIRRVLVPDGLLIATVDN  142 (246)
T ss_dssp             HHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred             HHHHHHHHHhhcCcCcEEEEEECC
Confidence            999999999999999999998864


No 8  
>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67  E-value=7.9e-17  Score=149.89  Aligned_cols=132  Identities=17%  Similarity=0.182  Sum_probs=97.6

Q ss_pred             CCCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHc-----CCCeEEEEecCCCCCCCCCCceEEEe
Q 012961          214 GNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALER-----GIPSTLGVLGTKRLPYPSRSFELAHC  285 (452)
Q Consensus       214 ~~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~r-----g~~~~~~~~d~~~lp~~d~sFDlVv~  285 (452)
                      ....+|||||||+|.++..|+..   .|+++|+++     .+++.|+++     ..++.+.++|+.++++++++||+|++
T Consensus        59 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~-----~~l~~ak~~~~~~~~~~~~f~~~d~~~~~~~~~~fD~I~~  133 (222)
T d2ex4a1          59 TGTSCALDCGAGIGRITKRLLLPLFREVDMVDITE-----DFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWI  133 (222)
T ss_dssp             CCCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCH-----HHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEE
T ss_pred             CCCCEEEEeccCCCHhhHHHHHhcCCEEEEeecCH-----HHhhcccccccccccccccccccccccccccccccccccc
Confidence            34568999999999999988753   355665554     455555443     23468899999999998899999999


Q ss_pred             ccccccccccH--HHHHHHHHHhcCCCcEEEEEeCCCCCC------ChhhHHHHHHHHHHHHhCCCEEEEEEec
Q 012961          286 SRCRIDWLQRD--GILLLELDRLLRPGGYFVYSSPEAYAH------DPENRRIWNAMYDLLKSMCWKIVSKKDQ  351 (452)
Q Consensus       286 s~~~l~~~~d~--~~~L~ei~RvLkPGG~lvi~~p~~~~~------~~~~~~~~~~l~~ll~~~Gf~~v~~~~~  351 (452)
                      .. +++|++++  ..+++++.++|||||.+++.++.....      +.......+++.++++++||+++..+.+
T Consensus       134 ~~-~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~aGf~ii~~~~q  206 (222)
T d2ex4a1         134 QW-VIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEERQ  206 (222)
T ss_dssp             ES-CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEEC
T ss_pred             cc-ccccchhhhhhhHHHHHHHhcCCcceEEEEEcccccccccccCCceeeCCHHHHHHHHHHcCCEEEEEEEe
Confidence            88 68887665  469999999999999999986432110      1111123468899999999999887654


No 9  
>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.66  E-value=6.4e-18  Score=164.51  Aligned_cols=207  Identities=10%  Similarity=0.075  Sum_probs=133.9

Q ss_pred             CCCCcccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHH----HcC
Q 012961          185 GTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFAL----ERG  260 (452)
Q Consensus       185 g~~f~~~~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~----~rg  260 (452)
                      ............+.+.+.+.+        .++.+|||||||+|.++.++++.  .++.+.++++|+.++..|+    +.+
T Consensus        39 ~~tL~~Aq~~k~~~~~~~l~l--------~~G~~VLDiGCG~G~~~~~~a~~--~g~~v~git~s~~q~~~a~~~~~~~~  108 (291)
T d1kpia_          39 DMTLEEAQYAKRKLALDKLNL--------EPGMTLLDIGCGWGSTMRHAVAE--YDVNVIGLTLSENQYAHDKAMFDEVD  108 (291)
T ss_dssp             TCCHHHHHHHHHHHHHHTTCC--------CTTCEEEEETCTTSHHHHHHHHH--HCCEEEEEESCHHHHHHHHHHHHHSC
T ss_pred             CCCHHHHHHHHHHHHHHhcCC--------CCCCEEEEecCcchHHHHHHHHh--cCcceeeccchHHHHHHHHHHHHhhc
Confidence            333444445555556665553        34569999999999999999863  1333334444555544443    334


Q ss_pred             CC--eEEEEecCCCCCCCCCCceEEEecccccccccc---------HHHHHHHHHHhcCCCcEEEEEeCCCCC-------
Q 012961          261 IP--STLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR---------DGILLLELDRLLRPGGYFVYSSPEAYA-------  322 (452)
Q Consensus       261 ~~--~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~d---------~~~~L~ei~RvLkPGG~lvi~~p~~~~-------  322 (452)
                      ..  +.+...|.   ++.+++||.|+|.. .++|+.+         ...+++++.|+|||||++++.+.....       
T Consensus       109 l~~~v~~~~~d~---~~~~~~fD~i~sie-~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~i~~~~~~~~~~~  184 (291)
T d1kpia_         109 SPRRKEVRIQGW---EEFDEPVDRIVSLG-AFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQEL  184 (291)
T ss_dssp             CSSCEEEEECCG---GGCCCCCSEEEEES-CGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEEEECCCHHHHHHH
T ss_pred             cchhhhhhhhcc---cccccccceEeech-hHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEEEeccCcchhhhc
Confidence            43  45555554   44568999999888 5666644         478999999999999999986532100       


Q ss_pred             --CChhhH-----------------HHHHHHHHHHHhCCCEEEEEEeceeEeecccchhhHhhhCCCCCCCccc-CCCCc
Q 012961          323 --HDPENR-----------------RIWNAMYDLLKSMCWKIVSKKDQTVIWAKPISNSCYLKRVPGSRPPLCS-SDDDP  382 (452)
Q Consensus       323 --~~~~~~-----------------~~~~~l~~ll~~~Gf~~v~~~~~~~iw~kp~~~~~~~~r~~~~~p~lc~-~~~~~  382 (452)
                        ..+...                 ....++..++++.||+++..++....|.+++..+...+.+..  ..+.. -+++.
T Consensus       185 ~~~~p~~~~~~~~fi~kyiFpgg~lps~~~~~~~~e~~gl~v~~~~~~~~hYa~TL~~W~~~f~~~~--~ei~~l~g~~~  262 (291)
T d1kpia_         185 GLTSPMSLLRFIKFILTEIFPGGRLPRISQVDYYSSNAGWKVERYHRIGANYVPTLNAWADALQAHK--DEAIALKGQET  262 (291)
T ss_dssp             TCCCCHHHHHHHHHHHHHTCTTCCCCCHHHHHHHHHHHTCEEEEEEECGGGHHHHHHHHHHHHHHTH--HHHHHHHHHHH
T ss_pred             cCCCchhhcccchHHHHHhcCCCCCCCHHHHHhhhcccccccceeeeccccHHHHHHHHHHHHHHHH--HHHHHhcChHH
Confidence              000000                 012577888999999999999988888888888766555431  11111 13445


Q ss_pred             chhhhhcccccccccccCcccccCc
Q 012961          383 DVTWNVLMKACISPYSAKMHHEKGT  407 (452)
Q Consensus       383 ~~~wy~~l~~C~~~~~~~~~~~~~~  407 (452)
                      ...|..+|.+|...|..+.....+.
T Consensus       263 ~r~W~~yl~~ce~~F~~~~~~v~q~  287 (291)
T d1kpia_         263 CDIYMHYLRGCSDLFRDKYTDVCQF  287 (291)
T ss_dssp             HHHHHHHHHHHHHHHHTTSSEEEEE
T ss_pred             HHHHHHHHHHHHHHHHCCCCeEEEE
Confidence            5679999999999888765544443


No 10 
>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=99.66  E-value=1e-16  Score=147.60  Aligned_cols=100  Identities=20%  Similarity=0.422  Sum_probs=80.8

Q ss_pred             CEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccccccc
Q 012961          217 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ  294 (452)
Q Consensus       217 ~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~  294 (452)
                      .+|||||||+|.++..|++.  .|+|+|+++.++..+. +.+...+..+.+...|+..+++++++||+|+|.. +++|++
T Consensus        39 ~~ILDiGcG~G~~~~~la~~~~~v~giD~S~~~i~~ak-~~~~~~~~~~~~~~~d~~~l~~~~~~fD~I~~~~-~l~~~~  116 (226)
T d1ve3a1          39 GKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAR-EYAKSRESNVEFIVGDARKLSFEDKTFDYVIFID-SIVHFE  116 (226)
T ss_dssp             CEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEES-CGGGCC
T ss_pred             CEEEEECCCcchhhhhHhhhhcccccccccccchhhhh-hhhccccccccccccccccccccCcCceEEEEec-chhhCC
Confidence            48999999999999999974  4566666665554443 3334456778888999999999999999999988 677765


Q ss_pred             --cHHHHHHHHHHhcCCCcEEEEEeC
Q 012961          295 --RDGILLLELDRLLRPGGYFVYSSP  318 (452)
Q Consensus       295 --d~~~~L~ei~RvLkPGG~lvi~~p  318 (452)
                        +...+|+++.|+|||||++++..+
T Consensus       117 ~~d~~~~l~~i~~~LkpgG~lii~~~  142 (226)
T d1ve3a1         117 PLELNQVFKEVRRVLKPSGKFIMYFT  142 (226)
T ss_dssp             HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             hhHHHHHHHHHHHHcCcCcEEEEEEc
Confidence              556799999999999999998764


No 11 
>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}
Probab=99.66  E-value=1.5e-16  Score=150.13  Aligned_cols=147  Identities=13%  Similarity=0.117  Sum_probs=105.0

Q ss_pred             cHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCC--CeEE
Q 012961          191 GADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTL  265 (452)
Q Consensus       191 ~~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~--~~~~  265 (452)
                      .....++.+.+.+.+        .++.+|||||||+|.++..|++.   .|+|+|+++.++..+. +.+.+.+.  ++.+
T Consensus        17 ~~~~~~~~l~~~~~l--------~pg~~VLDiGCG~G~~~~~la~~~~~~v~GvD~s~~~~~~ar-~~~~~~gl~~~v~~   87 (245)
T d1nkva_          17 FTEEKYATLGRVLRM--------KPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAK-RRAEELGVSERVHF   87 (245)
T ss_dssp             CCHHHHHHHHHHTCC--------CTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHH-HHHHHTTCTTTEEE
T ss_pred             CCHHHHHHHHHHcCC--------CCCCEEEEEcCCCCHHHHHHHHhcCCEEEEEecccchhhHHH-HHHHHhhccccchh
Confidence            445566677777775        24468999999999999998863   4556655555544332 23333454  4789


Q ss_pred             EEecCCCCCCCCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCC-------------hhhHHHHH
Q 012961          266 GVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHD-------------PENRRIWN  332 (452)
Q Consensus       266 ~~~d~~~lp~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~-------------~~~~~~~~  332 (452)
                      .++|+..+ +++++||+|+|.. +++|..+...+++++.|+|||||++++..+......             ........
T Consensus        88 ~~~d~~~~-~~~~~fD~v~~~~-~~~~~~d~~~~l~~~~r~LkPGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (245)
T d1nkva_          88 IHNDAAGY-VANEKCDVAACVG-ATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLP  165 (245)
T ss_dssp             EESCCTTC-CCSSCEEEEEEES-CGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHH
T ss_pred             hhhHHhhc-cccCceeEEEEEe-hhhccCCHHHHHHHHHHHcCcCcEEEEEeccccCCCChHHHHHHhccCCCcccCCHH
Confidence            99999888 4678999999988 578888999999999999999999999875311100             00111235


Q ss_pred             HHHHHHHhCCCEEEEE
Q 012961          333 AMYDLLKSMCWKIVSK  348 (452)
Q Consensus       333 ~l~~ll~~~Gf~~v~~  348 (452)
                      .+...++++||+++..
T Consensus       166 ~~~~~~~~aG~~~v~~  181 (245)
T d1nkva_         166 GLVGAFDDLGYDVVEM  181 (245)
T ss_dssp             HHHHHHHTTTBCCCEE
T ss_pred             HHHHHHHHcCCEEEEE
Confidence            7888999999987643


No 12 
>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.65  E-value=1.8e-17  Score=160.58  Aligned_cols=190  Identities=9%  Similarity=0.079  Sum_probs=122.8

Q ss_pred             CCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCCC--eEEEEecCCCCCCCCCCceEEEecccc
Q 012961          215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIP--STLGVLGTKRLPYPSRSFELAHCSRCR  289 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~~--~~~~~~d~~~lp~~d~sFDlVv~s~~~  289 (452)
                      ++.+|||||||+|.++.++++.   .|++++++...+..+. +.+++.+..  +.+...|...++   ++||.|++.. +
T Consensus        52 ~g~~VLDiGCG~G~~a~~~a~~~g~~v~gi~ls~~q~~~a~-~~~~~~~l~~~~~~~~~d~~~~~---~~fD~i~si~-~  126 (280)
T d2fk8a1          52 PGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCE-QVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIE-A  126 (280)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHH-HHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEES-C
T ss_pred             CCCEEEEecCCchHHHHHHHHhCceeEEEecchHHHHHHHH-HHHHhhccccchhhhhhhhhhhc---cchhhhhHhh-H
Confidence            4568999999999999998863   4555555444433322 222333443  455555655543   6899999888 4


Q ss_pred             ccccc--cHHHHHHHHHHhcCCCcEEEEEeCCCCC------CCh----------hhH----------HHHHHHHHHHHhC
Q 012961          290 IDWLQ--RDGILLLELDRLLRPGGYFVYSSPEAYA------HDP----------ENR----------RIWNAMYDLLKSM  341 (452)
Q Consensus       290 l~~~~--d~~~~L~ei~RvLkPGG~lvi~~p~~~~------~~~----------~~~----------~~~~~l~~ll~~~  341 (452)
                      ++|+.  +...+++++.++|||||++++.+.....      +..          +..          ....++..++++.
T Consensus       127 ~eh~~~~~~~~~f~~i~~~LkpgG~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~dfI~kyifPgg~lPS~~~l~~~~e~a  206 (280)
T d2fk8a1         127 FEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHGEKA  206 (280)
T ss_dssp             GGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHHT
T ss_pred             HHHhhhhhHHHHHHHHHhccCCCceEEEEEeeccCcchhhhcccccccccccccchhhhhccCCCcccchHhhhhhHHhh
Confidence            66664  3478999999999999999986522110      000          000          0114678889999


Q ss_pred             CCEEEEEEeceeEeecccchhhHhhhCCCCCCCcccC-CCCcchhhhhcccccccccccCcccccCccccC
Q 012961          342 CWKIVSKKDQTVIWAKPISNSCYLKRVPGSRPPLCSS-DDDPDVTWNVLMKACISPYSAKMHHEKGTGLVP  411 (452)
Q Consensus       342 Gf~~v~~~~~~~iw~kp~~~~~~~~r~~~~~p~lc~~-~~~~~~~wy~~l~~C~~~~~~~~~~~~~~~~~~  411 (452)
                      ||+++..++....+.+++..+.-.+.+..  ..+... .+.....|..+|..|...|..+.....+..+.|
T Consensus       207 Gf~v~~~~~~~~hYa~TL~~W~~~f~~~~--~~i~~~~~~~~~r~w~~yl~~c~~~F~~~~~~~~q~~~~k  275 (280)
T d2fk8a1         207 GFTVPEPLSLRPHYIKTLRIWGDTLQSNK--DKAIEVTSEEVYNRYMKYLRGCEHYFTDEMLDCSLVTYLK  275 (280)
T ss_dssp             TCBCCCCEECHHHHHHHHHHHHHHHHHTH--HHHHHHSCHHHHHHHHHHHHHHHHHHHTTSCEEEEEEEEC
T ss_pred             ccccceeeecccCHHHHHHHHHHHHHHHH--HHHHHhcCHHHHHHHHHHHHHHHHHHhCCCccEEEEEEEc
Confidence            99999888877677777776655443321  112222 344556798999999999988766555554444


No 13 
>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}
Probab=99.63  E-value=5.4e-16  Score=144.53  Aligned_cols=138  Identities=17%  Similarity=0.183  Sum_probs=104.0

Q ss_pred             CCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcC-CCeEEEEecCCCCCCCCCCceEEEeccccccccc
Q 012961          216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ  294 (452)
Q Consensus       216 ~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg-~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~  294 (452)
                      +.+|||||||+|.++..|++.   +.++.+.|+++.+++.|+++. .++.+..++.+.++++ ++||+|+|.. +++|++
T Consensus        21 ~~~VLDiGcG~G~~~~~l~~~---g~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~~~~~~-~~fD~I~~~~-vleh~~   95 (225)
T d2p7ia1          21 PGNLLELGSFKGDFTSRLQEH---FNDITCVEASEEAISHAQGRLKDGITYIHSRFEDAQLP-RRYDNIVLTH-VLEHID   95 (225)
T ss_dssp             SSCEEEESCTTSHHHHHHTTT---CSCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCCCS-SCEEEEEEES-CGGGCS
T ss_pred             CCcEEEEeCCCcHHHHHHHHc---CCeEEEEeCcHHHhhhhhcccccccccccccccccccc-cccccccccc-eeEecC
Confidence            347999999999999999875   334555566677777877663 3578888888888764 7899999887 799999


Q ss_pred             cHHHHHHHHH-HhcCCCcEEEEEeCCCCCC-----------------ChhhH-------HHHHHHHHHHHhCCCEEEEEE
Q 012961          295 RDGILLLELD-RLLRPGGYFVYSSPEAYAH-----------------DPENR-------RIWNAMYDLLKSMCWKIVSKK  349 (452)
Q Consensus       295 d~~~~L~ei~-RvLkPGG~lvi~~p~~~~~-----------------~~~~~-------~~~~~l~~ll~~~Gf~~v~~~  349 (452)
                      ++..+|.++. |+|+|||.++++.|.....                 .....       ..+++++++++++||+++..+
T Consensus        96 d~~~~l~~i~~~~Lk~gG~l~i~~pn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~l~~~l~~~Gf~i~~~~  175 (225)
T d2p7ia1          96 DPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYRS  175 (225)
T ss_dssp             SHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred             CHHHHHHHHHHHhcCCCceEEEEeCCcccHHHHHHHHhhhhhhhhhcCccccceeeeeccCHHHHHHHHHHCCCEEEEEE
Confidence            9999999998 8999999999998743210                 00000       124689999999999988755


Q ss_pred             eceeEeecccch
Q 012961          350 DQTVIWAKPISN  361 (452)
Q Consensus       350 ~~~~iw~kp~~~  361 (452)
                      .   ++-+|..+
T Consensus       176 ~---~~~kp~~~  184 (225)
T d2p7ia1         176 G---IFFKALAN  184 (225)
T ss_dssp             E---EEECCSCH
T ss_pred             E---EEeccccH
Confidence            3   44566665


No 14 
>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}
Probab=99.62  E-value=1.9e-16  Score=151.02  Aligned_cols=130  Identities=14%  Similarity=0.167  Sum_probs=96.3

Q ss_pred             CCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcC---CCeEEEEecCCCCCCCCCCceEEEeccc
Q 012961          215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG---IPSTLGVLGTKRLPYPSRSFELAHCSRC  288 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg---~~~~~~~~d~~~lp~~d~sFDlVv~s~~  288 (452)
                      ...+|||+|||+|.++..|+..   .|+++|+     ++.+++.|+++.   ..+.+.+.+++++++++++||+|+|.. 
T Consensus        93 ~~~~vLD~GcG~G~~t~~ll~~~~~~v~~vD~-----s~~~l~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I~~~~-  166 (254)
T d1xtpa_          93 GTSRALDCGAGIGRITKNLLTKLYATTDLLEP-----VKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQW-  166 (254)
T ss_dssp             CCSEEEEETCTTTHHHHHTHHHHCSEEEEEES-----CHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEES-
T ss_pred             CCCeEEEecccCChhhHHHHhhcCceEEEEcC-----CHHHHHhhhccccccccceeEEccccccccCCCccceEEeec-
Confidence            4568999999999999988752   4556655     455556665542   236788999999999999999999998 


Q ss_pred             cccccccH--HHHHHHHHHhcCCCcEEEEEeCCCCCC-------ChhhHHHHHHHHHHHHhCCCEEEEEEe
Q 012961          289 RIDWLQRD--GILLLELDRLLRPGGYFVYSSPEAYAH-------DPENRRIWNAMYDLLKSMCWKIVSKKD  350 (452)
Q Consensus       289 ~l~~~~d~--~~~L~ei~RvLkPGG~lvi~~p~~~~~-------~~~~~~~~~~l~~ll~~~Gf~~v~~~~  350 (452)
                      +++|+++.  ..+|+++.++|+|||+++|..+.....       +.......+.+.++++++||++++.+.
T Consensus       167 vl~hl~d~d~~~~l~~~~~~LkpgG~iii~e~~~~~~~~~~d~~d~~~~rs~~~~~~l~~~aGf~ii~~~~  237 (254)
T d1xtpa_         167 TAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAF  237 (254)
T ss_dssp             CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEE
T ss_pred             cccccchhhhHHHHHHHHHhcCCCcEEEEEecCCCCCcceecccCCceeCCHHHHHHHHHHcCCEEEEEEe
Confidence            57887665  468999999999999999976432110       011112346788999999999987664


No 15 
>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}
Probab=99.58  E-value=2.7e-15  Score=144.76  Aligned_cols=102  Identities=14%  Similarity=0.244  Sum_probs=80.9

Q ss_pred             CCCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccc
Q 012961          215 NIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCR  289 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~  289 (452)
                      ++.+|||||||+|.++..|++.     .|+++|+++.++..+. +.+...+.++.+.+.|+..++++ ++||+|+|.. +
T Consensus        27 ~~~~ILDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~-~~~~~~~~~~~f~~~d~~~~~~~-~~fD~v~~~~-~  103 (281)
T d2gh1a1          27 KPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEAR-ELFRLLPYDSEFLEGDATEIELN-DKYDIAICHA-F  103 (281)
T ss_dssp             SCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEECCHHHHHHHH-HHHHSSSSEEEEEESCTTTCCCS-SCEEEEEEES-C
T ss_pred             CcCEEEEecCcCCHHHHHHHHhCCCCCEEEEEecchhHhhhhh-ccccccccccccccccccccccc-CCceEEEEeh-h
Confidence            4568999999999999999863     3566666555544332 22233355788999999999886 5799999988 6


Q ss_pred             ccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012961          290 IDWLQRDGILLLELDRLLRPGGYFVYSSPE  319 (452)
Q Consensus       290 l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~  319 (452)
                      ++|++++..+|+++.++|||||.+++.+|.
T Consensus       104 l~~~~d~~~~l~~~~~~LkpgG~lii~~~~  133 (281)
T d2gh1a1         104 LLHMTTPETMLQKMIHSVKKGGKIICFEPH  133 (281)
T ss_dssp             GGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             hhcCCCHHHHHHHHHHHcCcCcEEEEEECC
Confidence            889999999999999999999999998864


No 16 
>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=99.57  E-value=3.7e-15  Score=139.86  Aligned_cols=103  Identities=19%  Similarity=0.329  Sum_probs=80.9

Q ss_pred             CCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccccc
Q 012961          215 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW  292 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~  292 (452)
                      +..+|||||||+|.++..|++.  .|+|+|+++.++..+. +.+.+.+.++.+.++|+++++++ ++||+|+|...+++|
T Consensus        41 ~~~~iLDiGcGtG~~~~~l~~~~~~v~gvD~s~~mi~~a~-~~~~~~~~~i~~~~~d~~~l~~~-~~fD~I~~~~~~~~~  118 (251)
T d1wzna1          41 EVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVAR-RKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMY  118 (251)
T ss_dssp             CCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGGG
T ss_pred             CCCEEEEeCCCCCccchhhcccceEEEEEeeccccccccc-cccccccccchheehhhhhcccc-cccchHhhhhhhhhc
Confidence            4568999999999999999875  4566666655554443 23334467899999999999987 589999998767777


Q ss_pred             c--ccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012961          293 L--QRDGILLLELDRLLRPGGYFVYSSPE  319 (452)
Q Consensus       293 ~--~d~~~~L~ei~RvLkPGG~lvi~~p~  319 (452)
                      .  ++...+|++++++|||||++++..+.
T Consensus       119 ~~~~~~~~~L~~~~~~LkpgG~lii~~~~  147 (251)
T d1wzna1         119 FDEEDLRKLFSKVAEALKPGGVFITDFPC  147 (251)
T ss_dssp             SCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred             CChHHHHHHHHHHHHHcCCCcEEEEEecc
Confidence            6  34567999999999999999997654


No 17 
>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}
Probab=99.51  E-value=1.8e-14  Score=135.44  Aligned_cols=101  Identities=19%  Similarity=0.364  Sum_probs=77.5

Q ss_pred             CCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccccc
Q 012961          215 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW  292 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~  292 (452)
                      ++++|||||||+|.++..|++.  .|+|+|+++.++..+. +.+...+.++.+.++|+..++++ ++||+|+|...+++|
T Consensus        37 ~~~~vLDiGCG~G~~~~~l~~~g~~v~GvD~S~~ml~~A~-~~~~~~~~~v~~~~~d~~~~~~~-~~fD~i~~~~~~~~~  114 (246)
T d1y8ca_          37 VFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAE-NKFRSQGLKPRLACQDISNLNIN-RKFDLITCCLDSTNY  114 (246)
T ss_dssp             CTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHH-HHHHHTTCCCEEECCCGGGCCCS-CCEEEEEECTTGGGG
T ss_pred             CCCeEEEEeCcCCHHHHHHHHhCCccEeeccchhhhhhcc-ccccccCccceeeccchhhhccc-ccccccceeeeeeec
Confidence            3468999999999999999985  4556655555554433 22334477899999999988875 689999987666766


Q ss_pred             cc---cHHHHHHHHHHhcCCCcEEEEEe
Q 012961          293 LQ---RDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       293 ~~---d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                      +.   +...+|++++++|+|||.|++..
T Consensus       115 ~~~~~~~~~~l~~~~~~LkpgG~~i~~~  142 (246)
T d1y8ca_         115 IIDSDDLKKYFKAVSNHLKEGGVFIFDI  142 (246)
T ss_dssp             CCSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             cCCHHHHHHHHHHHHHhCCCCeEEEEEe
Confidence            54   44669999999999999999865


No 18 
>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}
Probab=99.51  E-value=5e-14  Score=130.72  Aligned_cols=102  Identities=15%  Similarity=0.168  Sum_probs=71.5

Q ss_pred             CCCEEEEECCCCchHHHHHhhC-CCccccCChhhhhHHHHHHHHHc----CC--CeEEEEecCCCCCCCCCCceEEEecc
Q 012961          215 NIRNVLDVGCGVASFGAYLLSH-DIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTKRLPYPSRSFELAHCSR  287 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~-~v~~vdis~~dis~~~~~~A~~r----g~--~~~~~~~d~~~lp~~d~sFDlVv~s~  287 (452)
                      +..+|||||||+|..+..|++. .-.+..+.+.|+|+.|++.|+++    +.  .+.+...|...+  +...+|+|+|+.
T Consensus        39 ~~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~--~~~~~d~i~~~~  116 (225)
T d1im8a_          39 ADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHV--EIKNASMVILNF  116 (225)
T ss_dssp             TTCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTC--CCCSEEEEEEES
T ss_pred             CCCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhcc--ccccceeeEEee
Confidence            3458999999999999988863 11233444445555555666543    33  344455555444  456799999887


Q ss_pred             cccccc--ccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012961          288 CRIDWL--QRDGILLLELDRLLRPGGYFVYSSPE  319 (452)
Q Consensus       288 ~~l~~~--~d~~~~L~ei~RvLkPGG~lvi~~p~  319 (452)
                       ++||.  ++...+|++++|+|||||.+++.++.
T Consensus       117 -~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~~~  149 (225)
T d1im8a_         117 -TLQFLPPEDRIALLTKIYEGLNPNGVLVLSEKF  149 (225)
T ss_dssp             -CGGGSCGGGHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred             -eccccChhhHHHHHHHHHHhCCCCceeeccccc
Confidence             57776  46678999999999999999998653


No 19 
>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}
Probab=99.49  E-value=2e-14  Score=135.90  Aligned_cols=139  Identities=19%  Similarity=0.258  Sum_probs=95.8

Q ss_pred             CCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcC--CCeEEEEecCCCCCC-CCCCceEEEeccc
Q 012961          215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPY-PSRSFELAHCSRC  288 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg--~~~~~~~~d~~~lp~-~d~sFDlVv~s~~  288 (452)
                      +..+|||||||+|..+..+++.   .|+|+|+++.++..+. +.+.+.+  .++.+.++|+...++ .+++||+|+|.. 
T Consensus        24 ~~~~VLDlGCG~G~~~~~~~~~~~~~v~GiD~S~~~l~~A~-~r~~~~~~~~~v~f~~~D~~~~~~~~~~~fD~V~~~~-  101 (252)
T d1ri5a_          24 RGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDAR-VRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF-  101 (252)
T ss_dssp             TTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHH-HHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES-
T ss_pred             CcCEEEEecccCcHHHHHHHHcCCCeEEEecCCHHHHHHHH-HHHHhcCCCcceEEEEcchhhhcccccccceEEEEcc-
Confidence            3458999999999998888763   4667776666654443 2222222  357888999877665 467899999988 


Q ss_pred             cccccc----cHHHHHHHHHHhcCCCcEEEEEeCCC----------------C----CC----Ch---------------
Q 012961          289 RIDWLQ----RDGILLLELDRLLRPGGYFVYSSPEA----------------Y----AH----DP---------------  325 (452)
Q Consensus       289 ~l~~~~----d~~~~L~ei~RvLkPGG~lvi~~p~~----------------~----~~----~~---------------  325 (452)
                      ++||..    +...+++++.++|||||+|+++.|..                +    ..    ..               
T Consensus       102 ~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~  181 (252)
T d1ri5a_         102 SFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVN  181 (252)
T ss_dssp             CGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCS
T ss_pred             eeeecCCCHHHHHHHHHHHhceeCCCCEEEEEecCHHHHHHHHHhcccCCceEEEecccccCCcCcCceEEEEEcccccc
Confidence            566652    33569999999999999999875421                0    00    00               


Q ss_pred             ---hhHHHHHHHHHHHHhCCCEEEEEEeceeEe
Q 012961          326 ---ENRRIWNAMYDLLKSMCWKIVSKKDQTVIW  355 (452)
Q Consensus       326 ---~~~~~~~~l~~ll~~~Gf~~v~~~~~~~iw  355 (452)
                         +..-.++.+.+++++.||+++........|
T Consensus       182 ~~~E~l~~~~~l~~~~~~~g~~lv~~~~f~~~~  214 (252)
T d1ri5a_         182 NCIEYFVDFTRMVDGFKRLGLSLVERKGFIDFY  214 (252)
T ss_dssp             SEEEECCCHHHHHHHHHTTTEEEEEEEEHHHHH
T ss_pred             cCcccccCHHHHHHHHHHcCCEEEEEecHHHHH
Confidence               001135789999999999998877654444


No 20 
>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45  E-value=5e-14  Score=134.93  Aligned_cols=136  Identities=10%  Similarity=0.053  Sum_probs=88.6

Q ss_pred             CCCCCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHc-----C-CCeEE--EEecCC------CC
Q 012961          213 GGNIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALER-----G-IPSTL--GVLGTK------RL  273 (452)
Q Consensus       213 ~~~~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~r-----g-~~~~~--~~~d~~------~l  273 (452)
                      .++..+|||||||+|.++..|+..     .-..+.+.+.|+++.+++.|+++     . ..+.+  ...+.+      ..
T Consensus        38 ~~~~~~VLDiGcG~G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (280)
T d1jqea_          38 TKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKETSSEYQSRMLE  117 (280)
T ss_dssp             TCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSCHHHHHHHHTT
T ss_pred             CCCCCeEEEEcCCCCHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhhhhhhhcchhcc
Confidence            344457999999999998887642     11223344556666666666554     1 12232  333222      23


Q ss_pred             CCCCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCC-------------ChhhH--HHHHHHHHHH
Q 012961          274 PYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAH-------------DPENR--RIWNAMYDLL  338 (452)
Q Consensus       274 p~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~-------------~~~~~--~~~~~l~~ll  338 (452)
                      +.++++||+|+|.. ++||++++..+|++++++|+|||+++++.+.....             .....  ..-+++..++
T Consensus       118 ~~~~~~fD~I~~~~-~l~~~~d~~~~l~~l~~~LkpgG~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L  196 (280)
T d1jqea_         118 KKELQKWDFIHMIQ-MLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQML  196 (280)
T ss_dssp             SSSCCCEEEEEEES-CGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSCCCTTSCCCCHHHHHHHH
T ss_pred             cCCCCceeEEEEcc-ceecCCCHHHHHHHHHhhCCCCCEEEEEEecCcchHHHHHHHHHHhcCCCcccccCCHHHHHHHH
Confidence            56678999999998 68999999999999999999999999886432110             00000  0124688899


Q ss_pred             HhCCCEEEEEE
Q 012961          339 KSMCWKIVSKK  349 (452)
Q Consensus       339 ~~~Gf~~v~~~  349 (452)
                      ++.||..+...
T Consensus       197 ~~~G~~~~~~~  207 (280)
T d1jqea_         197 DNLGLKYECYD  207 (280)
T ss_dssp             HHHTCCEEEEE
T ss_pred             HHCCCceEEEe
Confidence            99999765443


No 21 
>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}
Probab=99.45  E-value=9.6e-14  Score=126.34  Aligned_cols=99  Identities=19%  Similarity=0.397  Sum_probs=76.1

Q ss_pred             CEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCC-CeEEEEecCCCCCCCCCCceEEEecccccccc
Q 012961          217 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL  293 (452)
Q Consensus       217 ~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~-~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~  293 (452)
                      .+|||||||+|..+.+|+++  .|+++|+++.++..+... +.+.+. .+.+...|...+++ +++||+|+|.. +++|+
T Consensus        32 grvLDiGcG~G~~~~~la~~g~~v~gvD~s~~~l~~a~~~-~~~~~~~~~~~~~~d~~~~~~-~~~fD~I~~~~-~~~~~  108 (198)
T d2i6ga1          32 GRTLDLGCGNGRNSLYLAANGYDVTAWDKNPASMANLERI-KAAEGLDNLQTDLVDLNTLTF-DGEYDFILSTV-VMMFL  108 (198)
T ss_dssp             CEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTTCTTEEEEECCTTTCCC-CCCEEEEEEES-CGGGS
T ss_pred             CcEEEECCCCCHHHHHHHHHhhhhccccCcHHHHHHHHHH-hhhccccchhhhheecccccc-cccccEEEEee-eeecC
Confidence            48999999999999999985  566666666665544422 333444 47888889888876 47899999988 57776


Q ss_pred             ccH--HHHHHHHHHhcCCCcEEEEEeC
Q 012961          294 QRD--GILLLELDRLLRPGGYFVYSSP  318 (452)
Q Consensus       294 ~d~--~~~L~ei~RvLkPGG~lvi~~p  318 (452)
                      ++.  ..+++++.++|+|||++++...
T Consensus       109 ~~~~~~~~l~~~~~~L~pgG~~~~~~~  135 (198)
T d2i6ga1         109 EAQTIPGLIANMQRCTKPGGYNLIVAA  135 (198)
T ss_dssp             CTTHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             CHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            543  5699999999999999998753


No 22 
>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}
Probab=99.44  E-value=1.8e-13  Score=130.06  Aligned_cols=122  Identities=13%  Similarity=0.146  Sum_probs=93.0

Q ss_pred             CCCEEEEECCCCchHHHHHhh--CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccccc
Q 012961          215 NIRNVLDVGCGVASFGAYLLS--HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW  292 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~--~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~  292 (452)
                      ++.+|||+|||+|.++..+++  .+|+++|+++.++..+. +.++..+.++.+..+|... .+++++||+|+++. ..  
T Consensus       120 ~g~~VLDiGcGsG~l~i~aa~~g~~V~gvDis~~av~~A~-~na~~n~~~~~~~~~d~~~-~~~~~~fD~V~ani-~~--  194 (254)
T d2nxca1         120 PGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAE-ANAKRNGVRPRFLEGSLEA-ALPFGPFDLLVANL-YA--  194 (254)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHH-HHHHHTTCCCEEEESCHHH-HGGGCCEEEEEEEC-CH--
T ss_pred             ccCEEEEcccchhHHHHHHHhcCCEEEEEECChHHHHHHH-HHHHHcCCceeEEeccccc-cccccccchhhhcc-cc--
Confidence            445899999999999988876  46889999998886665 5566678888888887654 34567899999764 22  


Q ss_pred             cccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEEe
Q 012961          293 LQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD  350 (452)
Q Consensus       293 ~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~  350 (452)
                       .....++.++.++|||||++++++.-.        ..-+.+.+.+++.||+++....
T Consensus       195 -~~l~~l~~~~~~~LkpGG~lilSgil~--------~~~~~v~~~~~~~Gf~~~~~~~  243 (254)
T d2nxca1         195 -ELHAALAPRYREALVPGGRALLTGILK--------DRAPLVREAMAGAGFRPLEEAA  243 (254)
T ss_dssp             -HHHHHHHHHHHHHEEEEEEEEEEEEEG--------GGHHHHHHHHHHTTCEEEEEEE
T ss_pred             -ccHHHHHHHHHHhcCCCcEEEEEecch--------hhHHHHHHHHHHCCCEEEEEEE
Confidence             234568899999999999999976321        1235788889999999877653


No 23 
>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.42  E-value=2e-13  Score=127.90  Aligned_cols=134  Identities=15%  Similarity=0.157  Sum_probs=92.8

Q ss_pred             CCCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCC-CCCCCCceEEEeccc
Q 012961          214 GNIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL-PYPSRSFELAHCSRC  288 (452)
Q Consensus       214 ~~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~l-p~~d~sFDlVv~s~~  288 (452)
                      .++.+|||||||+|.++..|++.    .|+++|+++.++..+. +.|.. ..++..+..+.... ++.+..+|++++.. 
T Consensus        73 kpG~~VLDlGcGsG~~~~~la~~~~~g~V~aVDiS~~~i~~a~-~~a~~-~~ni~~i~~d~~~~~~~~~~~~~v~~i~~-  149 (230)
T d1g8sa_          73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELL-DACAE-RENIIPILGDANKPQEYANIVEKVDVIYE-  149 (230)
T ss_dssp             CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHH-HHTTT-CTTEEEEECCTTCGGGGTTTCCCEEEEEE-
T ss_pred             CCCCEEEEeCEEcCHHHHHHHHhCCCCEEEEEeCcHHHHHHHH-HHHhh-hcccceEEEeeccCcccccccceeEEeec-
Confidence            34568999999999999999863    4677777766654432 22322 23455566665443 35566777766544 


Q ss_pred             cccccccHHHHHHHHHHhcCCCcEEEEEeCCCCC-CChhhHHHHHHHHHHHHhCCCEEEEEEe
Q 012961          289 RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYA-HDPENRRIWNAMYDLLKSMCWKIVSKKD  350 (452)
Q Consensus       289 ~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~-~~~~~~~~~~~l~~ll~~~Gf~~v~~~~  350 (452)
                      .+++..+...++.++.+.|||||+++++...... ........+++..+.++++||++++..+
T Consensus       150 ~~~~~~~~~~~l~~~~r~LKpgG~~~i~~k~~~~d~~~~~~~~~~e~~~~L~~aGF~ive~id  212 (230)
T d1g8sa_         150 DVAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKEILEAGGFKIVDEVD  212 (230)
T ss_dssp             CCCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred             cccchHHHHHHHHHHHHhcccCceEEEEeeccccCCCCCHHHHHHHHHHHHHHcCCEEEEEec
Confidence            5667788888999999999999999987632211 1122234567888999999999987664


No 24 
>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}
Probab=99.42  E-value=8.3e-13  Score=124.91  Aligned_cols=132  Identities=19%  Similarity=0.200  Sum_probs=89.8

Q ss_pred             CCCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcC--CCeEEEEecCCCCCCCCCCceEEEecc
Q 012961          214 GNIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSR  287 (452)
Q Consensus       214 ~~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg--~~~~~~~~d~~~lp~~d~sFDlVv~s~  287 (452)
                      ...++|||||||+|.++..++++    .++++|+ +.++..+. +.+.+.+  .++.+..+|..+ +.+ .+||+|+++.
T Consensus        79 ~~~~~VLDvGcG~G~~~~~la~~~p~~~~~~~D~-~~~~~~a~-~~~~~~~~~~rv~~~~~D~~~-~~~-~~~D~v~~~~  154 (253)
T d1tw3a2          79 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTAR-SYLKDEGLSDRVDVVEGDFFE-PLP-RKADAIILSF  154 (253)
T ss_dssp             TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHH-HHHHHTTCTTTEEEEECCTTS-CCS-SCEEEEEEES
T ss_pred             ccCCEEEEeCCCCCHHHHHHHHhcceeEEEEccC-HHHHHHHH-HHHHHhhcccchhhccccchh-hcc-cchhheeecc
Confidence            34569999999999999999863    3455665 33444443 3333333  357888888644 233 5799999888


Q ss_pred             ccccccccH--HHHHHHHHHhcCCCcEEEEEeCCCCC--CChhhH---------------HHHHHHHHHHHhCCCEEEEE
Q 012961          288 CRIDWLQRD--GILLLELDRLLRPGGYFVYSSPEAYA--HDPENR---------------RIWNAMYDLLKSMCWKIVSK  348 (452)
Q Consensus       288 ~~l~~~~d~--~~~L~ei~RvLkPGG~lvi~~p~~~~--~~~~~~---------------~~~~~l~~ll~~~Gf~~v~~  348 (452)
                       ++|+.++.  ..+|++++++|||||+++|.......  ......               ...+++.++++++||++++.
T Consensus       155 -vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~~~~~~~~~~~~~~~~dl~~~~~~~g~~rt~~e~~~ll~~AGf~~~~v  233 (253)
T d1tw3a2         155 -VLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEV  233 (253)
T ss_dssp             -CGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEE
T ss_pred             -ccccCCchhhHHHHHHHHHhcCCCcEEEEEeccCCCCCcchhHHHHhhHHHHhhCCCcCCCHHHHHHHHHHCCCeEEEE
Confidence             56666554  46899999999999999998643211  111100               02357889999999998876


Q ss_pred             Ee
Q 012961          349 KD  350 (452)
Q Consensus       349 ~~  350 (452)
                      +.
T Consensus       234 ~~  235 (253)
T d1tw3a2         234 RQ  235 (253)
T ss_dssp             EE
T ss_pred             EE
Confidence            64


No 25 
>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}
Probab=99.41  E-value=1.3e-13  Score=123.32  Aligned_cols=100  Identities=10%  Similarity=-0.038  Sum_probs=76.4

Q ss_pred             CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHc-----------------CCCeEEEEecCCCCCC-C
Q 012961          215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER-----------------GIPSTLGVLGTKRLPY-P  276 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~r-----------------g~~~~~~~~d~~~lp~-~  276 (452)
                      ++.+|||+|||+|..+.+|+++   |.++.+.|+|+.+++.|+++                 +....+...|...++. .
T Consensus        20 ~~~rvLd~GCG~G~~a~~la~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~   96 (201)
T d1pjza_          20 PGARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD   96 (201)
T ss_dssp             TTCEEEETTTCCSHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred             CCCEEEEecCcCCHHHHHHHHc---CCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccccc
Confidence            4558999999999999999985   55566667777777777764                 2334677778777753 3


Q ss_pred             CCCceEEEecccccccccc--HHHHHHHHHHhcCCCcEEEEEeC
Q 012961          277 SRSFELAHCSRCRIDWLQR--DGILLLELDRLLRPGGYFVYSSP  318 (452)
Q Consensus       277 d~sFDlVv~s~~~l~~~~d--~~~~L~ei~RvLkPGG~lvi~~p  318 (452)
                      ...||+|+++. +++++.+  ...+++++.++|||||++++...
T Consensus        97 ~~~~D~i~~~~-~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~~  139 (201)
T d1pjza_          97 IGHCAAFYDRA-AMIALPADMRERYVQHLEALMPQACSGLLITL  139 (201)
T ss_dssp             HHSEEEEEEES-CGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEE
T ss_pred             ccceeEEEEEe-eeEecchhhhHHHHHHHHHhcCCCcEEEEEEc
Confidence            46899999887 5666643  46799999999999999887653


No 26 
>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41  E-value=6.5e-14  Score=131.69  Aligned_cols=135  Identities=13%  Similarity=0.076  Sum_probs=87.8

Q ss_pred             CCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCCCe----------------------------
Q 012961          215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPS----------------------------  263 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~~~----------------------------  263 (452)
                      ++.+|||||||+|.++..++..   .|+|+|+++.++..++.... +.....                            
T Consensus        51 ~g~~vLDlGcG~G~~~~~~~~~~~~~v~giD~S~~~i~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (257)
T d2a14a1          51 QGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLK-KEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA  129 (257)
T ss_dssp             CEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHH-TCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHhHHHHhccccCcEEEecCCHHHHHHHHHHHh-hccccchhhhHHHHHHHhccccchHHHHHHHHhh
Confidence            4568999999999988777643   46777777666655442221 111110                            


Q ss_pred             ---EEEEe----cCCCCCCCCCCceEEEeccccccccc----cHHHHHHHHHHhcCCCcEEEEEeCCCCCC---Chh---
Q 012961          264 ---TLGVL----GTKRLPYPSRSFELAHCSRCRIDWLQ----RDGILLLELDRLLRPGGYFVYSSPEAYAH---DPE---  326 (452)
Q Consensus       264 ---~~~~~----d~~~lp~~d~sFDlVv~s~~~l~~~~----d~~~~L~ei~RvLkPGG~lvi~~p~~~~~---~~~---  326 (452)
                         .....    +....++++++||+|++.+ ++||..    +...+++++.|+|||||++++.++.....   ...   
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~-~l~~~~~~~~~~~~~l~~i~~~LkpGG~li~~~~~~~~~~~~~~~~~~  208 (257)
T d2a14a1         130 AVKRVLKCDVHLGNPLAPAVLPLADCVLTLL-AMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFS  208 (257)
T ss_dssp             HEEEEEECCTTSSSTTTTCCCCCEEEEEEES-CHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEE
T ss_pred             hhhcccccccccccccccccCCcccEEeehh-hHHHhcccHHHHHHHHHHHHhccCCCcEEEEEEecccccceecccccc
Confidence               11111    1223367788999999988 466653    55679999999999999999987532210   000   


Q ss_pred             -hHHHHHHHHHHHHhCCCEEEEEEec
Q 012961          327 -NRRIWNAMYDLLKSMCWKIVSKKDQ  351 (452)
Q Consensus       327 -~~~~~~~l~~ll~~~Gf~~v~~~~~  351 (452)
                       ..-..++++++++++||+++..+..
T Consensus       209 ~~~~~~~~~~~~l~~aGf~v~~~~~~  234 (257)
T d2a14a1         209 CVALEKGEVEQAVLDAGFDIEQLLHS  234 (257)
T ss_dssp             CCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred             ccCCCHHHHHHHHHHCCCEEEEEEEe
Confidence             0012468899999999998876543


No 27 
>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=99.39  E-value=1.7e-12  Score=117.23  Aligned_cols=138  Identities=14%  Similarity=0.133  Sum_probs=98.9

Q ss_pred             CCcccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcC--CC
Q 012961          187 HFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG--IP  262 (452)
Q Consensus       187 ~f~~~~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg--~~  262 (452)
                      .+.+...+....+...+..        .+..+|||||||+|.++..++..  .|+++|+++.++..+. +.+++.+  .+
T Consensus        13 ~~~~t~~eir~~il~~l~~--------~~g~~VLDiGcGsG~~s~~lA~~~~~V~avD~~~~~l~~a~-~n~~~~gl~~~   83 (186)
T d1l3ia_          13 VPGPTAMEVRCLIMCLAEP--------GKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTE-MNLQRHGLGDN   83 (186)
T ss_dssp             SCCCCCHHHHHHHHHHHCC--------CTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHH-HHHHHTTCCTT
T ss_pred             CCCCChHHHHHHHHHhcCC--------CCCCEEEEEECCeEcccccccccceEEEEecCCHHHHHHHH-HHHHHcCCCcc
Confidence            3344556666666666664        34568999999999999999874  5778877777665554 3333445  36


Q ss_pred             eEEEEecCCCCCCCCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCC
Q 012961          263 STLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMC  342 (452)
Q Consensus       263 ~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~G  342 (452)
                      +.+..+|+.+.+.+...||+|++... .   .+...+++++.+.|||||++++.....        +....+.+.++..|
T Consensus        84 v~~~~gda~~~~~~~~~~D~v~~~~~-~---~~~~~~~~~~~~~LkpgG~lvi~~~~~--------e~~~~~~~~l~~~~  151 (186)
T d1l3ia_          84 VTLMEGDAPEALCKIPDIDIAVVGGS-G---GELQEILRIIKDKLKPGGRIIVTAILL--------ETKFEAMECLRDLG  151 (186)
T ss_dssp             EEEEESCHHHHHTTSCCEEEEEESCC-T---TCHHHHHHHHHHTEEEEEEEEEEECBH--------HHHHHHHHHHHHTT
T ss_pred             eEEEECchhhcccccCCcCEEEEeCc-c---ccchHHHHHHHHHhCcCCEEEEEeecc--------ccHHHHHHHHHHcC
Confidence            88999998887777789999998763 2   334678999999999999999865321        12344667778888


Q ss_pred             CEE
Q 012961          343 WKI  345 (452)
Q Consensus       343 f~~  345 (452)
                      |..
T Consensus       152 ~~~  154 (186)
T d1l3ia_         152 FDV  154 (186)
T ss_dssp             CCC
T ss_pred             CCe
Confidence            754


No 28 
>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.38  E-value=1.6e-13  Score=128.21  Aligned_cols=144  Identities=15%  Similarity=0.094  Sum_probs=91.0

Q ss_pred             HHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHc----CCCeE
Q 012961          192 ADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALER----GIPST  264 (452)
Q Consensus       192 ~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~r----g~~~~  264 (452)
                      ...+.+.+++.+..         .+.+|||||||+|.++..+++.   .++++|+++     .+++.|+++    +.++.
T Consensus        39 ~~~~~~~la~~~~~---------~g~~VLdIGcG~G~~a~~~a~~~~~~v~~id~s~-----~~~~~a~~~~~~~~~~~~  104 (229)
T d1zx0a1          39 ETPYMHALAAAASS---------KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECND-----GVFQRLRDWAPRQTHKVI  104 (229)
T ss_dssp             GHHHHHHHHHHHTT---------TCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCH-----HHHHHHHHHGGGCSSEEE
T ss_pred             HHHHHHHHHHhhcc---------CCCeEEEeeccchHHHHHHHHcCCCeEEEeCCCH-----HHHHHHHHHhhhcccccc
Confidence            34556666665542         3458999999999999999874   355565554     444555443    34455


Q ss_pred             EEEecCCC--CCCCCCCceEEEe----ccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCC-----CCChhhHHHH-H
Q 012961          265 LGVLGTKR--LPYPSRSFELAHC----SRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAY-----AHDPENRRIW-N  332 (452)
Q Consensus       265 ~~~~d~~~--lp~~d~sFDlVv~----s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~-----~~~~~~~~~~-~  332 (452)
                      +...++..  .++++++||.|+.    ....+++..+...+++++.|+|||||+|++......     .........+ +
T Consensus       105 ~~~~~~~~~~~~~~~~~fD~i~fD~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (229)
T d1zx0a1         105 PLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEE  184 (229)
T ss_dssp             EEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHH
T ss_pred             cccccccccccccccccccceeecccccccccccccCHHHHHHHHHHHcCCCcEEEEEecCCcchhhhhhhhhcchhhhh
Confidence            66555433  3567889999973    222456667788899999999999999987442110     0001111122 4


Q ss_pred             HHHHHHHhCCCEEEEEE
Q 012961          333 AMYDLLKSMCWKIVSKK  349 (452)
Q Consensus       333 ~l~~ll~~~Gf~~v~~~  349 (452)
                      .+...+.++||+.....
T Consensus       185 ~~~~~l~~agF~~~~i~  201 (229)
T d1zx0a1         185 TQVPALLEAGFRRENIR  201 (229)
T ss_dssp             HTHHHHHHTTCCGGGEE
T ss_pred             HHHHHHHHCCCeeEEEE
Confidence            55667788999755443


No 29 
>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.35  E-value=1.6e-12  Score=117.95  Aligned_cols=133  Identities=16%  Similarity=0.174  Sum_probs=88.2

Q ss_pred             cCceeecCCCCCCCc-ccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHH
Q 012961          175 NGEKINFPGGGTHFH-DGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHEN  251 (452)
Q Consensus       175 ~g~~~~F~g~g~~f~-~~~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~  251 (452)
                      .|+...|......|. .+.+...+.+.+.+..        .+..+|||||||+|.++..++..  .|+++|+++..+..+
T Consensus        19 ~g~~~~~~t~~gvF~~~~~d~~t~lLi~~l~~--------~~~~~VLDiGcG~G~~~~~la~~~~~v~~iD~s~~~i~~a   90 (194)
T d1dusa_          19 RGKKLKFKTDSGVFSYGKVDKGTKILVENVVV--------DKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLA   90 (194)
T ss_dssp             TTEEEEEEEETTSTTTTSCCHHHHHHHHHCCC--------CTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHH
T ss_pred             CCeeEEEEcCCCccCCCCcCHHHHHHHHhCCc--------CCCCeEEEEeecCChhHHHHHhhccccceeeeccccchhH
Confidence            455555633333342 2334445556666553        34568999999999999999873  566777666555444


Q ss_pred             HHHHHHHc--CCCeEEEEecCCCCCCCCCCceEEEecccccccccc-HHHHHHHHHHhcCCCcEEEEEe
Q 012961          252 QIQFALER--GIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR-DGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       252 ~~~~A~~r--g~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~d-~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                      ..+.....  ..++.+...|..+ ++++++||+|+|+. .+|+..+ ...+++++.++|+|||.+++..
T Consensus        91 ~~n~~~~~l~~~~i~~~~~d~~~-~~~~~~fD~Ii~~~-p~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  157 (194)
T d1dusa_          91 KENIKLNNLDNYDIRVVHSDLYE-NVKDRKYNKIITNP-PIRAGKEVLHRIIEEGKELLKDNGEIWVVI  157 (194)
T ss_dssp             HHHHHHTTCTTSCEEEEECSTTT-TCTTSCEEEEEECC-CSTTCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             HHHHHHhCCccceEEEEEcchhh-hhccCCceEEEEcc-cEEecchhhhhHHHHHHHhcCcCcEEEEEE
Confidence            43222221  2346778888765 56778999999876 4555444 3679999999999999998865


No 30 
>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}
Probab=99.32  E-value=4.3e-12  Score=116.58  Aligned_cols=120  Identities=12%  Similarity=0.178  Sum_probs=89.9

Q ss_pred             EEEEECCCCchHHHHHhh----CCCccccCChhhhhHHHHHHHHHcC-CCeEEEEecCCCCC--CCCCCceEEEeccccc
Q 012961          218 NVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLP--YPSRSFELAHCSRCRI  290 (452)
Q Consensus       218 ~VLDIGCG~G~~~~~La~----~~v~~vdis~~dis~~~~~~A~~rg-~~~~~~~~d~~~lp--~~d~sFDlVv~s~~~l  290 (452)
                      .|||||||+|.++..|+.    ..++|+|++...+..+.. .+.+.+ .++.+..+|+..+.  ++++++|.|++.+ ..
T Consensus        32 lvLeIGcG~G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~-~~~~~~l~Nv~~~~~Da~~l~~~~~~~~~d~v~i~f-p~  109 (204)
T d2fcaa1          32 IHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQ-KVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNF-SD  109 (204)
T ss_dssp             EEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHH-HHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEES-CC
T ss_pred             eEEEEEecCcHHHHHHHHhCCCCcEEEeecchHHHHHHHH-HHHHHhccCchhcccchhhhhcccCchhhhcccccc-cc
Confidence            699999999999999986    367888888877766553 344444 46888999987775  7889999999776 46


Q ss_pred             cccccH--------HHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEE
Q 012961          291 DWLQRD--------GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVS  347 (452)
Q Consensus       291 ~~~~d~--------~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~  347 (452)
                      +|....        ..+|.++.|+|||||.|.|.+        +....++.+.+.+.+.++....
T Consensus       110 P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~T--------D~~~y~~~~~~~~~~~~~~~~~  166 (204)
T d2fcaa1         110 PWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT--------DNRGLFEYSLKSFSEYGLLLTY  166 (204)
T ss_dssp             CCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE--------SCHHHHHHHHHHHHHHTCEEEE
T ss_pred             ccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEEE--------CChHHHHHHHHHHHHCCCcccc
Confidence            665432        469999999999999999865        1222356677777777776443


No 31 
>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.31  E-value=3.6e-12  Score=117.51  Aligned_cols=133  Identities=15%  Similarity=0.073  Sum_probs=88.2

Q ss_pred             CCCEEEEECCCCchHHHHHhh----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccc
Q 012961          215 NIRNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRI  290 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~----~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l  290 (452)
                      ++.+|||||||+|..+.+|++    ..|+++|+++.++..+. +.++.+ .++.+...+....+.....+|.+.+.+..+
T Consensus        56 pg~~VLDlGcG~G~~~~~la~~v~~g~V~gvDis~~~i~~a~-~~a~~~-~ni~~i~~d~~~~~~~~~~~~~vd~v~~~~  133 (209)
T d1nt2a_          56 GDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLL-ELVRER-NNIIPLLFDASKPWKYSGIVEKVDLIYQDI  133 (209)
T ss_dssp             SSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHH-HHHHHC-SSEEEECSCTTCGGGTTTTCCCEEEEEECC
T ss_pred             CCCEEEEeCCcCCHHHHHHHHhccCCeEEEEeCCHHHHHHHH-HHhhcc-CCceEEEeeccCccccccccceEEEEEecc
Confidence            445899999999999999886    25888888887776554 444444 367888888776654444444443322235


Q ss_pred             cccccHHHHHHHHHHhcCCCcEEEEEeCCC-CCCChhhHHHHHHHHHHHHhCCCEEEEEEe
Q 012961          291 DWLQRDGILLLELDRLLRPGGYFVYSSPEA-YAHDPENRRIWNAMYDLLKSMCWKIVSKKD  350 (452)
Q Consensus       291 ~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~-~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~  350 (452)
                      ++..+...++.++.++|||||++++..... ..........+......++ .||++++...
T Consensus       134 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~d~~~~~~~~~~~~~~~l~-~gf~i~E~i~  193 (209)
T d1nt2a_         134 AQKNQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEME-GDFKIVKHGS  193 (209)
T ss_dssp             CSTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred             cChhhHHHHHHHHHHHhccCCeEEEEEEccccCCCCCHHHHHHHHHHHHH-cCCEEEEEEc
Confidence            556677889999999999999999875211 0011112233455555554 6999887654


No 32 
>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.31  E-value=5.5e-13  Score=128.57  Aligned_cols=116  Identities=18%  Similarity=0.288  Sum_probs=75.2

Q ss_pred             HHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCCC-----eEE
Q 012961          193 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIP-----STL  265 (452)
Q Consensus       193 ~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~~-----~~~  265 (452)
                      ..+.+.+.+.+..        ....+|||||||+|.++..|++.  .|+|+|+++.++..+... +.+++..     ..+
T Consensus        42 ~~~~~~l~~~l~~--------~~~~~vLD~GcG~G~~~~~la~~g~~v~gvD~S~~ml~~A~~~-~~~~~~~~~~~~~~~  112 (292)
T d1xvaa_          42 AEYKAWLLGLLRQ--------HGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKE-RWNRRKEPAFDKWVI  112 (292)
T ss_dssp             HHHHHHHHHHHHH--------TTCCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTTTSHHHHTCEE
T ss_pred             HHHHHHHHHHhhh--------cCCCEEEEecCCCcHHHHHHHHcCCeeeeccCchHHHHHHHHH-HHhcccccccceeee
Confidence            3444555555542        23458999999999999999985  455665555555443322 1222222     233


Q ss_pred             EEecCC----CCCCCCCCceEEEecccccccccc-------HHHHHHHHHHhcCCCcEEEEEeC
Q 012961          266 GVLGTK----RLPYPSRSFELAHCSRCRIDWLQR-------DGILLLELDRLLRPGGYFVYSSP  318 (452)
Q Consensus       266 ~~~d~~----~lp~~d~sFDlVv~s~~~l~~~~d-------~~~~L~ei~RvLkPGG~lvi~~p  318 (452)
                      ..++..    .+|. .++||+|+|...+++|+.+       ...+|+++.|+|||||+|++...
T Consensus       113 ~~~~~~~~~~~~~~-~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~  175 (292)
T d1xvaa_         113 EEANWLTLDKDVPA-GDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR  175 (292)
T ss_dssp             EECCGGGHHHHSCC-TTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             eeccccccccccCC-CCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEEeec
Confidence            344432    2333 4689999998777877643       45699999999999999999653


No 33 
>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.30  E-value=3e-12  Score=119.07  Aligned_cols=143  Identities=14%  Similarity=0.001  Sum_probs=91.2

Q ss_pred             HHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHc-------------
Q 012961          193 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER-------------  259 (452)
Q Consensus       193 ~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~r-------------  259 (452)
                      ....+.+.+.+..        .+..+|||+|||+|..+.+|++.   |.++.+.|+|+.+++.|+++             
T Consensus        31 ~~l~~~~~~~l~~--------~~~~rvLd~GCG~G~~a~~LA~~---G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~   99 (229)
T d2bzga1          31 QLLKKHLDTFLKG--------KSGLRVFFPLCGKAVEMKWFADR---GHSVVGVEISELGIQEFFTEQNLSYSEEPITEI   99 (229)
T ss_dssp             HHHHHHHHHHHTT--------CCSCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTS
T ss_pred             HHHHHHHHHhcCC--------CCCCEEEEeCCCCcHHHHHHHhC---CCcEEEEeCCHHHHHHHHHHhhccccccchhcc
Confidence            3444555555542        34558999999999999999985   33444445555555555443             


Q ss_pred             ---------CCCeEEEEecCCCCC-CCCCCceEEEecccccccc--ccHHHHHHHHHHhcCCCcEEEEEeCCCCC---CC
Q 012961          260 ---------GIPSTLGVLGTKRLP-YPSRSFELAHCSRCRIDWL--QRDGILLLELDRLLRPGGYFVYSSPEAYA---HD  324 (452)
Q Consensus       260 ---------g~~~~~~~~d~~~lp-~~d~sFDlVv~s~~~l~~~--~d~~~~L~ei~RvLkPGG~lvi~~p~~~~---~~  324 (452)
                               +.++.+.++|...++ ...+.||+|+...+ ++++  ++...+++++.++|||||++++.......   ..
T Consensus       100 ~~~~~~~~~~~~v~~~~~d~~~l~~~~~~~fd~i~~~~~-l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~~~~~~~~~~g  178 (229)
T d2bzga1         100 PGTKVFKSSSGNISLYCCSIFDLPRTNIGKFDMIWDRGA-LVAINPGDRKCYADTMFSLLGKKFQYLLCVLSYDPTKHPG  178 (229)
T ss_dssp             TTCEEEEETTSSEEEEESCGGGGGGSCCCCEEEEEESSS-TTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTTCCC
T ss_pred             cccceeeecCCcEEEEEcchhhccccccCceeEEEEEEE-EEeccchhhHHHHHHHHhhcCCcceEEEEEcccCCCCCCC
Confidence                     235678888877764 55688999998774 5554  33467999999999999998876532110   00


Q ss_pred             hhhHHHHHHHHHHHHhCCCEEEEE
Q 012961          325 PENRRIWNAMYDLLKSMCWKIVSK  348 (452)
Q Consensus       325 ~~~~~~~~~l~~ll~~~Gf~~v~~  348 (452)
                      +...-.-+++..++.. +|.+...
T Consensus       179 pp~~~~~~el~~lf~~-~~~i~~l  201 (229)
T d2bzga1         179 PPFYVPHAEIERLFGK-ICNIRCL  201 (229)
T ss_dssp             SSCCCCHHHHHHHHTT-TEEEEEE
T ss_pred             CCCCCCHHHHHHHhcC-CCEEEEE
Confidence            0000012457777754 6765443


No 34 
>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}
Probab=99.29  E-value=8.2e-12  Score=118.40  Aligned_cols=131  Identities=20%  Similarity=0.178  Sum_probs=86.7

Q ss_pred             CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcC--CCeEEEEecCCCCCCCCCCceEEEeccc
Q 012961          215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRC  288 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg--~~~~~~~~d~~~lp~~d~sFDlVv~s~~  288 (452)
                      ..++|||||||+|.++..|+++    .++++|+ +..+..+. +...+.+  .++.+...|... +.+ .+||+|++.+ 
T Consensus        81 ~~~~vlDvG~G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~-~~~~~~~~~~ri~~~~~d~~~-~~p-~~~D~v~~~~-  155 (256)
T d1qzza2          81 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERAR-RRFADAGLADRVTVAEGDFFK-PLP-VTADVVLLSF-  155 (256)
T ss_dssp             TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHH-HHHHHTTCTTTEEEEECCTTS-CCS-CCEEEEEEES-
T ss_pred             cCCEEEEECCCCCHHHHHHHHhhcCcEEEEecC-hHHHHHHH-HHHhhcCCcceeeeeeeeccc-ccc-ccchhhhccc-
Confidence            4568999999999999999974    4556665 33332222 2333333  346666666543 444 4699999998 


Q ss_pred             cccccccH--HHHHHHHHHhcCCCcEEEEEeCCCCC---CChhhH---------------HHHHHHHHHHHhCCCEEEEE
Q 012961          289 RIDWLQRD--GILLLELDRLLRPGGYFVYSSPEAYA---HDPENR---------------RIWNAMYDLLKSMCWKIVSK  348 (452)
Q Consensus       289 ~l~~~~d~--~~~L~ei~RvLkPGG~lvi~~p~~~~---~~~~~~---------------~~~~~l~~ll~~~Gf~~v~~  348 (452)
                      ++|+.++.  ..+|++++++|||||+++|.+.....   ..+...               +..+++.++++++||++++.
T Consensus       156 vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~~~~~~~~~~~~~~~~~d~~ml~~~~g~~rt~~e~~~ll~~AGf~~~~~  235 (256)
T d1qzza2         156 VLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASE  235 (256)
T ss_dssp             CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEE
T ss_pred             cccccCcHHHHHHHHHHHhhcCCcceeEEEEeccCCCCcccHHHHHHHHHHHHhhCCCccCCHHHHHHHHHHCCCceeEE
Confidence            46655544  45899999999999999998753211   111100               02368899999999999877


Q ss_pred             Ee
Q 012961          349 KD  350 (452)
Q Consensus       349 ~~  350 (452)
                      +.
T Consensus       236 ~~  237 (256)
T d1qzza2         236 RT  237 (256)
T ss_dssp             EE
T ss_pred             EE
Confidence            64


No 35 
>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.28  E-value=1.2e-12  Score=124.73  Aligned_cols=134  Identities=13%  Similarity=0.115  Sum_probs=84.4

Q ss_pred             CCCEEEEECCCCchHHHHHhh---CCCccccCChhhhhHHHHHHHHHcCCC-----------------------------
Q 012961          215 NIRNVLDVGCGVASFGAYLLS---HDIIAMSLAPNDVHENQIQFALERGIP-----------------------------  262 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~---~~v~~vdis~~dis~~~~~~A~~rg~~-----------------------------  262 (452)
                      .+.+|||||||+|.+...++.   ..|+++|+++.++..++.... +....                             
T Consensus        54 ~g~~vLDiGcG~g~~~~~~~~~~~~~v~~~D~S~~~i~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (263)
T d2g72a1          54 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQ-EEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA  132 (263)
T ss_dssp             CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHT-TCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred             CCcEEEEeccCCCHHHHHHhcccCCeEEEEeCCHHHHHHHHHHHh-cCcccccchhhhhhhhhhccccchhhhhHHHhhh
Confidence            456999999999987765553   246777776666544432111 10000                             


Q ss_pred             --eEEEEecCC------CCCCCCCCceEEEeccccccccc----cHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhh---
Q 012961          263 --STLGVLGTK------RLPYPSRSFELAHCSRCRIDWLQ----RDGILLLELDRLLRPGGYFVYSSPEAYAHDPEN---  327 (452)
Q Consensus       263 --~~~~~~d~~------~lp~~d~sFDlVv~s~~~l~~~~----d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~---  327 (452)
                        ..+...|+.      ..+.+.++||+|++.++ +|++.    +...+++++.++|||||+|++.++.........   
T Consensus       133 ~~~~~~~~Dv~~~~~~~~~~~~~~~fD~V~~~~~-l~~i~~~~~~~~~~l~~~~~~LkPGG~li~~~~~~~~~~~~~~~~  211 (263)
T d2g72a1         133 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFC-LEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEAR  211 (263)
T ss_dssp             HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESC-HHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEE
T ss_pred             hhhccccccccCCCccccCCcCcCccCeeeeHHH-HHHHccCHHHHHHHHHHHHHHcCCCCEEEEecccCCcccccCCcc
Confidence              012233332      22344568999999984 66653    456799999999999999999775322110000   


Q ss_pred             ----HHHHHHHHHHHHhCCCEEEEEEe
Q 012961          328 ----RRIWNAMYDLLKSMCWKIVSKKD  350 (452)
Q Consensus       328 ----~~~~~~l~~ll~~~Gf~~v~~~~  350 (452)
                          .-..+++.++++++||+++..+.
T Consensus       212 ~~~~~~t~e~v~~~l~~aGf~v~~~~~  238 (263)
T d2g72a1         212 LTVVPVSEEEVREALVRSGYKVRDLRT  238 (263)
T ss_dssp             EECCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred             cccCCCCHHHHHHHHHHCCCeEEEEEE
Confidence                01237899999999999887553


No 36 
>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]}
Probab=99.23  E-value=5.2e-11  Score=109.19  Aligned_cols=121  Identities=12%  Similarity=0.134  Sum_probs=87.5

Q ss_pred             EEEEECCCCchHHHHHhh----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC--CCCCCceEEEecccccc
Q 012961          218 NVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--YPSRSFELAHCSRCRID  291 (452)
Q Consensus       218 ~VLDIGCG~G~~~~~La~----~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp--~~d~sFDlVv~s~~~l~  291 (452)
                      .|||||||+|.++..++.    ..++|+|++...+..+..+..+..-.++.+..+|+..+.  +++.++|.|++.+ ..+
T Consensus        34 lvLdIGcG~G~~~~~lA~~~p~~~~iGid~~~~~v~~a~~~~~~~~l~Ni~~~~~da~~l~~~~~~~~~~~i~i~f-PdP  112 (204)
T d1yzha1          34 IHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNF-SDP  112 (204)
T ss_dssp             EEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEES-CCC
T ss_pred             eEEEEeccCCHHHHHHHHHCCCCceEEEeccHHHHHHHHHhhhhhccccceeeecCHHHHhhhccCCceehhcccc-ccc
Confidence            799999999999999986    356788887776665553333333346889999987775  7789999999766 455


Q ss_pred             ccccH--------HHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEE
Q 012961          292 WLQRD--------GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVS  347 (452)
Q Consensus       292 ~~~d~--------~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~  347 (452)
                      |....        ..+|+++.++|||||.|.+.+-        ....++.+...+...++....
T Consensus       113 w~K~~h~krRl~~~~~l~~~~~~LkpgG~l~i~TD--------~~~Y~~~~le~~~~~~~~~~~  168 (204)
T d1yzha1         113 WPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD--------NRGLFEYSLVSFSQYGMKLNG  168 (204)
T ss_dssp             CCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES--------CHHHHHHHHHHHHHHTCEEEE
T ss_pred             ccchhhhhhhhhHHHHHHHHHHhCCCCcEEEEEEC--------CccHHHHHHHHHHHCCccccc
Confidence            54332        5699999999999999998651        112245566667777876543


No 37 
>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.23  E-value=1.4e-11  Score=117.26  Aligned_cols=131  Identities=16%  Similarity=0.123  Sum_probs=92.0

Q ss_pred             HHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHc---CCCeEEEE
Q 012961          196 ILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALER---GIPSTLGV  267 (452)
Q Consensus       196 ~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~r---g~~~~~~~  267 (452)
                      +..+..++..        .++.+|||+|||+|+++.+|+..     .|+++|+.+..+..+..++....   ..++.+.+
T Consensus        85 ~s~Ii~~l~i--------~PG~~VLE~G~GsG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~  156 (264)
T d1i9ga_          85 AAQIVHEGDI--------FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVV  156 (264)
T ss_dssp             HHHHHHHTTC--------CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEEC
T ss_pred             HHHHHHHhCC--------CCCCEEEecCcCCcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEe
Confidence            4445555553        34569999999999999999862     57778777666544443322211   24678899


Q ss_pred             ecCCCCCCCCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEE
Q 012961          268 LGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVS  347 (452)
Q Consensus       268 ~d~~~lp~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~  347 (452)
                      .|..+.++++++||.|++      .++++..++.++.++|||||.+++..|..-       +..+.++.+..+.+|..++
T Consensus       157 ~d~~~~~~~~~~fDaV~l------dlp~P~~~l~~~~~~LkpGG~lv~~~P~i~-------Qv~~~~~~l~~~~~f~~i~  223 (264)
T d1i9ga_         157 SDLADSELPDGSVDRAVL------DMLAPWEVLDAVSRLLVAGGVLMVYVATVT-------QLSRIVEALRAKQCWTEPR  223 (264)
T ss_dssp             SCGGGCCCCTTCEEEEEE------ESSCGGGGHHHHHHHEEEEEEEEEEESSHH-------HHHHHHHHHHHHSSBCCCE
T ss_pred             cccccccccCCCcceEEE------ecCCHHHHHHHHHhccCCCCEEEEEeCccC-------hHHHHHHHHHHcCCeecce
Confidence            999888999999999974      257777899999999999999999876532       1223333443466786544


No 38 
>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}
Probab=99.17  E-value=3.2e-11  Score=111.26  Aligned_cols=110  Identities=8%  Similarity=0.002  Sum_probs=77.9

Q ss_pred             HHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHcCCCeEEEE
Q 012961          193 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGIPSTLGV  267 (452)
Q Consensus       193 ~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~  267 (452)
                      ......+.+.+..        +++.+|||||||+|.++..|++.     .|+++|+++..+..+..........++.+..
T Consensus        61 P~~~a~~l~~l~l--------~~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~  132 (213)
T d1dl5a1          61 PSLMALFMEWVGL--------DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVC  132 (213)
T ss_dssp             HHHHHHHHHHTTC--------CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             chhhHHHHHhhhc--------cccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhccccccccc
Confidence            3444555566653        34569999999999999988752     4778887776665555333333334577778


Q ss_pred             ecCCCCCCCCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961          268 LGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       268 ~d~~~lp~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                      +|.....+.+++||+|++.. .+++.+      .++.+.|||||++++..
T Consensus       133 ~d~~~~~~~~~~fD~I~~~~-~~~~~p------~~l~~~LkpGG~lv~pv  175 (213)
T d1dl5a1         133 GDGYYGVPEFSPYDVIFVTV-GVDEVP------ETWFTQLKEGGRVIVPI  175 (213)
T ss_dssp             SCGGGCCGGGCCEEEEEECS-BBSCCC------HHHHHHEEEEEEEEEEB
T ss_pred             CchHHccccccchhhhhhhc-cHHHhH------HHHHHhcCCCcEEEEEE
Confidence            88877777778999999887 455543      35678899999999854


No 39 
>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}
Probab=99.15  E-value=4e-11  Score=113.34  Aligned_cols=120  Identities=8%  Similarity=0.105  Sum_probs=85.3

Q ss_pred             CCCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHc-CCCeEEEEecCCCCCCCCCCceEEEeccc
Q 012961          215 NIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALER-GIPSTLGVLGTKRLPYPSRSFELAHCSRC  288 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~r-g~~~~~~~~d~~~lp~~d~sFDlVv~s~~  288 (452)
                      ++.+|||+|||+|.++..|+..     .|+++|+++..+..+..+..+.. ..++.+...|..+. +++++||+|++.  
T Consensus        85 pG~rVLEiG~GsG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~-~~~~~fD~V~ld--  161 (250)
T d1yb2a1          85 PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF-ISDQMYDAVIAD--  161 (250)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC-CCSCCEEEEEEC--
T ss_pred             CcCEEEEeeeeCcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeecc-cccceeeeeeec--
Confidence            4458999999999999998852     47777766655444432222211 24578888887765 467899999853  


Q ss_pred             cccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEE
Q 012961          289 RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK  349 (452)
Q Consensus       289 ~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~  349 (452)
                          ++++..++.++.++|||||++++..|..        ....++.+.+++.||..++..
T Consensus       162 ----~p~p~~~l~~~~~~LKpGG~lv~~~P~i--------~Qv~~~~~~l~~~gf~~i~~~  210 (250)
T d1yb2a1         162 ----IPDPWNHVQKIASMMKPGSVATFYLPNF--------DQSEKTVLSLSASGMHHLETV  210 (250)
T ss_dssp             ----CSCGGGSHHHHHHTEEEEEEEEEEESSH--------HHHHHHHHHSGGGTEEEEEEE
T ss_pred             ----CCchHHHHHHHHHhcCCCceEEEEeCCc--------ChHHHHHHHHHHCCCceeEEE
Confidence                3556678999999999999999987743        223456666788899766443


No 40 
>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=99.14  E-value=1.5e-10  Score=107.87  Aligned_cols=130  Identities=13%  Similarity=0.160  Sum_probs=86.4

Q ss_pred             CCCEEEEECCCCchHHHHHhh-----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCC---CCCCCCCceEEEec
Q 012961          215 NIRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKR---LPYPSRSFELAHCS  286 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~-----~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~---lp~~d~sFDlVv~s  286 (452)
                      ++.+|||+|||+|.++.+|++     ..|+++|+++.++..+. +.++.+ .++..+..|...   .+.....+|+|++.
T Consensus        73 pG~~VLDlGaGsG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~-~~a~~~-~~~~~i~~d~~~~~~~~~~~~~vD~i~~d  150 (227)
T d1g8aa_          73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELV-PIVEER-RNIVPILGDATKPEEYRALVPKVDVIFED  150 (227)
T ss_dssp             TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHH-HHHSSC-TTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred             CCCEEEEeccCCCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHH-HHHHhc-CCceEEEEECCCcccccccccceEEEEEE
Confidence            456999999999999999986     35788888887765543 333333 345555666533   33444679988864


Q ss_pred             cccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCC-CChhhHHHHHHHHHHHHhCCCEEEEEEe
Q 012961          287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYA-HDPENRRIWNAMYDLLKSMCWKIVSKKD  350 (452)
Q Consensus       287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~-~~~~~~~~~~~l~~ll~~~Gf~~v~~~~  350 (452)
                         +++..+...++.++.+.|||||+++++...... ........+.+.+.++ +.||++++..+
T Consensus       151 ---~~~~~~~~~~l~~~~~~LkpgG~lvi~~ka~~~~~~~~~~~v~~~v~~l~-~~gf~iie~i~  211 (227)
T d1g8aa_         151 ---VAQPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVEREL-SEYFEVIERLN  211 (227)
T ss_dssp             ---CCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHH-HTTSEEEEEEE
T ss_pred             ---ccccchHHHHHHHHHHhcccCCeEEEEEECCccCCCCCHHHHHHHHHHHH-HcCCEEEEEEc
Confidence               445567788999999999999999987532211 1112223345555555 45999886543


No 41 
>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}
Probab=99.09  E-value=1.9e-10  Score=109.59  Aligned_cols=130  Identities=14%  Similarity=0.119  Sum_probs=90.1

Q ss_pred             HHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEe
Q 012961          196 ILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVL  268 (452)
Q Consensus       196 ~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~  268 (452)
                      +..+...+..        .++.+|||+|||+|.++..|+..     .|+++|+++..+..+..+ .+..+.  .+.+...
T Consensus        92 ~~~Ii~~l~i--------~pG~~VLDiG~GsG~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~-~~~~g~~~~v~~~~~  162 (266)
T d1o54a_          92 SSFIAMMLDV--------KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESN-LTKWGLIERVTIKVR  162 (266)
T ss_dssp             HHHHHHHTTC--------CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHH-HHHTTCGGGEEEECC
T ss_pred             HHHHHHhhCC--------CCCCEEEECCCCCCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHH-HHHhccccCcEEEec
Confidence            3445555553        34569999999999999999852     577887777666555433 333343  3455555


Q ss_pred             cCCCCCCCCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEE
Q 012961          269 GTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK  348 (452)
Q Consensus       269 d~~~lp~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~  348 (452)
                      |.. ..++...||.|+.      .++++..++.++.++|||||++++..|..        ....++.+.+++.||..++.
T Consensus       163 d~~-~~~~~~~~D~V~~------d~p~p~~~l~~~~~~LKpGG~lv~~~P~~--------~Qv~~~~~~l~~~gF~~i~~  227 (266)
T d1o54a_         163 DIS-EGFDEKDVDALFL------DVPDPWNYIDKCWEALKGGGRFATVCPTT--------NQVQETLKKLQELPFIRIEV  227 (266)
T ss_dssp             CGG-GCCSCCSEEEEEE------CCSCGGGTHHHHHHHEEEEEEEEEEESSH--------HHHHHHHHHHHHSSEEEEEE
T ss_pred             ccc-ccccccceeeeEe------cCCCHHHHHHHHHhhcCCCCEEEEEeCcc--------cHHHHHHHHHHHCCceeEEE
Confidence            543 2455678998863      35677889999999999999999987643        23456777788899976654


Q ss_pred             E
Q 012961          349 K  349 (452)
Q Consensus       349 ~  349 (452)
                      .
T Consensus       228 ~  228 (266)
T d1o54a_         228 W  228 (266)
T ss_dssp             E
T ss_pred             E
Confidence            4


No 42 
>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.08  E-value=1.4e-10  Score=112.65  Aligned_cols=97  Identities=15%  Similarity=0.158  Sum_probs=72.5

Q ss_pred             CCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHc--CCCeEEEEecCCCCCCCCCCceEEEecccc
Q 012961          215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALER--GIPSTLGVLGTKRLPYPSRSFELAHCSRCR  289 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~r--g~~~~~~~~d~~~lp~~d~sFDlVv~s~~~  289 (452)
                      +.++|||||||+|.++..+++.   .|+++|.++.... +. +.+++.  ..++.+..++..++++++++||+|++.. .
T Consensus        35 ~~~~VLDiGcG~G~lsl~aa~~Ga~~V~aid~s~~~~~-a~-~~~~~~~~~~~i~~~~~~~~~l~~~~~~~D~Ivse~-~  111 (311)
T d2fyta1          35 KDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQ-AM-DIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEW-M  111 (311)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHTTCSEEEEEESSTHHHH-HH-HHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECC-C
T ss_pred             CcCEEEEECCCCCHHHHHHHHcCCCEEEEEeCHHHHHH-HH-HHHHHhCCCccceEEEeeHHHhcCccccceEEEEee-e
Confidence            3458999999999999998873   5888888876542 22 233333  3458889999999999889999999854 3


Q ss_pred             ccccc---cHHHHHHHHHHhcCCCcEEE
Q 012961          290 IDWLQ---RDGILLLELDRLLRPGGYFV  314 (452)
Q Consensus       290 l~~~~---d~~~~L~ei~RvLkPGG~lv  314 (452)
                      .++..   ....++....++|||||+++
T Consensus       112 ~~~~~~e~~~~~~~~a~~~~Lkp~G~ii  139 (311)
T d2fyta1         112 GYFLLFESMLDSVLYAKNKYLAKGGSVY  139 (311)
T ss_dssp             BTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred             eeecccccccHHHHHHHHhcCCCCcEEe
Confidence            33332   23567888899999999998


No 43 
>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.05  E-value=1e-10  Score=114.72  Aligned_cols=121  Identities=12%  Similarity=0.054  Sum_probs=84.6

Q ss_pred             CCcccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhh----CCCccccCChhhhhHHHHHHH--HH--
Q 012961          187 HFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFA--LE--  258 (452)
Q Consensus       187 ~f~~~~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~----~~v~~vdis~~dis~~~~~~A--~~--  258 (452)
                      .|..........+.+.+..        .+..+|||||||+|.++..++.    ..++|+|+++.++..+..+..  +.  
T Consensus       131 ~~~e~~~~~~~~~~~~~~l--------~~~~~vlD~GcG~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~  202 (328)
T d1nw3a_         131 VYGETSFDLVAQMIDEIKM--------TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWM  202 (328)
T ss_dssp             CCCCCCHHHHHHHHHHSCC--------CTTCEEEEETCTTSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHH
T ss_pred             chhhhHHHHHHHHHHHcCC--------CCCCEEEEcCCCCCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHh
Confidence            3334444555566666553        2445899999999999988875    247788888776655433222  11  


Q ss_pred             -----cCCCeEEEEecCCCCCCCCCCc--eEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961          259 -----RGIPSTLGVLGTKRLPYPSRSF--ELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       259 -----rg~~~~~~~~d~~~lp~~d~sF--DlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                           +..++.+..+|+..+++.+..|  |+|+++.  +.|.++....|.++.|+|||||++++..
T Consensus       203 ~~~g~~~~~i~~~~gd~~~~~~~~~~~~advi~~~~--~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         203 KWYGKKHAEYTLERGDFLSEEWRERIANTSVIFVNN--FAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             HHHTCCCCCEEEEECCTTSHHHHHHHHHCSEEEECC--TTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             hhccccCCceEEEECcccccccccccCcceEEEEcc--eecchHHHHHHHHHHHhCCCCcEEEEec
Confidence                 2346889999999888776555  5666543  4466778889999999999999998754


No 44 
>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.05  E-value=1.8e-10  Score=112.70  Aligned_cols=97  Identities=20%  Similarity=0.256  Sum_probs=72.8

Q ss_pred             CCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcC--CCeEEEEecCCCCCCCCCCceEEEeccc--
Q 012961          216 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRC--  288 (452)
Q Consensus       216 ~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg--~~~~~~~~d~~~lp~~d~sFDlVv~s~~--  288 (452)
                      ..+|||||||+|.++..++++   .|+++|.++. + ..+.+.+++.+  .++.++.++..++++++++||+|++...  
T Consensus        39 ~~~VLDlGcGtG~ls~~aa~~Ga~~V~avd~s~~-~-~~a~~~~~~~~~~~~i~~i~~~~~~l~~~~~~~D~i~se~~~~  116 (328)
T d1g6q1_          39 DKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSI-I-EMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGY  116 (328)
T ss_dssp             TCEEEEETCTTSHHHHHHHHTCCSEEEEEESSTH-H-HHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBT
T ss_pred             cCEEEEeCCCCCHHHHHHHHhCCCEEEEEeCCHH-H-HHHHHHHHHhCccccceEEEeehhhccCcccceeEEEEEecce
Confidence            458999999999999988863   5788887752 2 22334444443  3578889999999999999999998542  


Q ss_pred             cccccccHHHHHHHHHHhcCCCcEEE
Q 012961          289 RIDWLQRDGILLLELDRLLRPGGYFV  314 (452)
Q Consensus       289 ~l~~~~d~~~~L~ei~RvLkPGG~lv  314 (452)
                      .+.+......++.++.|+|||||.++
T Consensus       117 ~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         117 FLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             TBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             eeccchhHHHHHHHHHhccCCCeEEE
Confidence            22233455778999999999999987


No 45 
>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.03  E-value=1.8e-10  Score=107.08  Aligned_cols=96  Identities=17%  Similarity=0.172  Sum_probs=71.2

Q ss_pred             CCCEEEEECCCCchHHHHHhh-----CCCccccCChhhhhHHHHHHHHHc-----CCCeEEEEecCCCCCCCCCCceEEE
Q 012961          215 NIRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALER-----GIPSTLGVLGTKRLPYPSRSFELAH  284 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~-----~~v~~vdis~~dis~~~~~~A~~r-----g~~~~~~~~d~~~lp~~d~sFDlVv  284 (452)
                      ++.+|||||||+|+.+..|++     ..|+++|+.+..+..+.....+..     ..++.+..+|....+.++++||.|+
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~~~~~~fD~I~  155 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIH  155 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEE
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccccchhhhhhhhh
Confidence            445899999999999888875     257888887776665543333221     2356788889888777778999999


Q ss_pred             eccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961          285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                      +.. .+++.+      .++.+.|||||++++..
T Consensus       156 ~~~-~~~~ip------~~l~~~LkpGG~LV~pv  181 (224)
T d1i1na_         156 VGA-AAPVVP------QALIDQLKPGGRLILPV  181 (224)
T ss_dssp             ECS-BBSSCC------HHHHHTEEEEEEEEEEE
T ss_pred             hhc-chhhcC------HHHHhhcCCCcEEEEEE
Confidence            877 455433      45789999999999854


No 46 
>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.01  E-value=3e-10  Score=110.62  Aligned_cols=96  Identities=16%  Similarity=0.187  Sum_probs=73.6

Q ss_pred             CCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcC--CCeEEEEecCCCCCCCCCCceEEEeccccc
Q 012961          216 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRCRI  290 (452)
Q Consensus       216 ~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg--~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l  290 (452)
                      .++|||||||+|.++..+++.   .|+++|.++..  ..+.+.++..+  .++.+..++..+++++.++||+|++.. ..
T Consensus        34 ~~~VLDiGcG~G~ls~~aa~~Ga~~V~avd~s~~~--~~a~~~~~~n~~~~~v~~~~~~~~~~~~~~~~~D~ivs~~-~~  110 (316)
T d1oria_          34 DKVVLDVGSGTGILCMFAAKAGARKVIGIECSSIS--DYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEW-MG  110 (316)
T ss_dssp             TCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTTH--HHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECC-CB
T ss_pred             cCEEEEEecCCcHHHHHHHHhCCCEEEEEcCcHHH--hhhhhHHHHhCCccccceEeccHHHcccccceeEEEeeee-ee
Confidence            458999999999999988863   58889987643  22334444443  348888999999999989999999754 33


Q ss_pred             ccc---ccHHHHHHHHHHhcCCCcEEE
Q 012961          291 DWL---QRDGILLLELDRLLRPGGYFV  314 (452)
Q Consensus       291 ~~~---~d~~~~L~ei~RvLkPGG~lv  314 (452)
                      ++.   .....++..+.|+|||||.++
T Consensus       111 ~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_         111 YCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             BTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             eeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence            333   345779999999999999987


No 47 
>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}
Probab=98.95  E-value=3.9e-09  Score=100.64  Aligned_cols=123  Identities=17%  Similarity=0.146  Sum_probs=85.1

Q ss_pred             CCCEEEEECCCCchHHHHHhh----CCCccccCChhhhhHHHHHHHHHcCC-CeEEEEecCCCCCCCCCCceEEEecccc
Q 012961          215 NIRNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPYPSRSFELAHCSRCR  289 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~----~~v~~vdis~~dis~~~~~~A~~rg~-~~~~~~~d~~~lp~~d~sFDlVv~s~~~  289 (452)
                      ...+|||+|||+|.++..++.    ..|+++|+++..+..+. +.++..+. ++.+...|... ++++++||+|+|+--.
T Consensus       108 ~~~~vlDlGtGSG~I~i~la~~~p~~~v~avDis~~Al~~A~-~Na~~~~~~~v~~~~~d~~~-~~~~~~fDlIvsNPPY  185 (274)
T d2b3ta1         108 QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQ-RNAQHLAIKNIHILQSDWFS-ALAGQQFAMIVSNPPY  185 (274)
T ss_dssp             SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHH-HHHHHHTCCSEEEECCSTTG-GGTTCCEEEEEECCCC
T ss_pred             cccceeeeehhhhHHHHHHHhhCCcceeeeccchhHHHhHHH-HHHHHhCcccceeeeccccc-ccCCCceeEEEecchh
Confidence            345799999999999999875    35777777776665555 33444454 58888888644 4556799999986321


Q ss_pred             c------------cccc------------cHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEE
Q 012961          290 I------------DWLQ------------RDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKI  345 (452)
Q Consensus       290 l------------~~~~------------d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~  345 (452)
                      +            .|.+            ....++.++.+.|+|||.+++.....         ..+.+.+++++.||..
T Consensus       186 i~~~~~~~~~~v~~~eP~~AL~~g~dGl~~~~~i~~~a~~~L~~~G~l~lEig~~---------q~~~v~~~l~~~gf~~  256 (274)
T d2b3ta1         186 IDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQ---------QGEAVRQAFILAGYHD  256 (274)
T ss_dssp             BCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSS---------CHHHHHHHHHHTTCTT
T ss_pred             hhhhhhcccccccccchhhhcccccccchHHHHHHHHHHHhcCCCCEEEEEECch---------HHHHHHHHHHHCCCCe
Confidence            1            1110            12448889999999999999964221         1357889999999975


Q ss_pred             EEE
Q 012961          346 VSK  348 (452)
Q Consensus       346 v~~  348 (452)
                      ++.
T Consensus       257 i~~  259 (274)
T d2b3ta1         257 VET  259 (274)
T ss_dssp             CCE
T ss_pred             EEE
Confidence            543


No 48 
>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein  FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.94  E-value=1.8e-09  Score=105.41  Aligned_cols=121  Identities=12%  Similarity=0.095  Sum_probs=80.4

Q ss_pred             CCCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHc-----------CCCeEEEEecCCCCC--CC
Q 012961          215 NIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALER-----------GIPSTLGVLGTKRLP--YP  276 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~r-----------g~~~~~~~~d~~~lp--~~  276 (452)
                      ++.+|||+|||+|.++..|+..     .|+++|+.+..+..+..++.+..           ..++.+...|+....  ++
T Consensus        98 pG~rVLE~GtGsG~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~di~~~~~~~~  177 (324)
T d2b25a1          98 PGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIK  177 (324)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC----
T ss_pred             CCCEEEEecccccHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecchhhcccccC
Confidence            4559999999999999999862     57788877766655543333211           235778888876653  45


Q ss_pred             CCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHH--hCCCEEEEEE
Q 012961          277 SRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLK--SMCWKIVSKK  349 (452)
Q Consensus       277 d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~--~~Gf~~v~~~  349 (452)
                      +..||.|+.-      ++++..++.++.++|||||+|++..|..-        ....+.+.++  ..+|..++..
T Consensus       178 ~~~fD~V~LD------~p~P~~~l~~~~~~LKpGG~lv~~~P~i~--------Qv~~~~~~l~~~~~~f~~i~~~  238 (324)
T d2b25a1         178 SLTFDAVALD------MLNPHVTLPVFYPHLKHGGVCAVYVVNIT--------QVIELLDGIRTCELALSCEKIS  238 (324)
T ss_dssp             ---EEEEEEC------SSSTTTTHHHHGGGEEEEEEEEEEESSHH--------HHHHHHHHHHHHTCCEEEEEEE
T ss_pred             CCCcceEeec------CcCHHHHHHHHHHhccCCCEEEEEeCCHH--------HHHHHHHHHHHcCCCceeeEEE
Confidence            6789999842      35566789999999999999999776541        2233444454  4578776543


No 49 
>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=98.89  E-value=7.9e-09  Score=97.78  Aligned_cols=158  Identities=13%  Similarity=0.110  Sum_probs=104.2

Q ss_pred             eecCceeecCCCCCCCcccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhh---CCCccccCChhhhh
Q 012961          173 VVNGEKINFPGGGTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS---HDIIAMSLAPNDVH  249 (452)
Q Consensus       173 ~~~g~~~~F~g~g~~f~~~~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~---~~v~~vdis~~dis  249 (452)
                      +..|-.+.+.-..+.|..........+.+.+.          ++.+|||+|||+|.++..++.   ..|+++|+++..+.
T Consensus        75 ~E~g~~~~~d~~~~~f~~~~~~er~ri~~~~~----------~g~~VlD~~aG~G~~~l~~a~~~~~~V~avd~n~~a~~  144 (260)
T d2frna1          75 VENGIKYKLDVAKIMFSPANVKERVRMAKVAK----------PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFK  144 (260)
T ss_dssp             EETTEEEEEETTTSCCCGGGHHHHHHHHHHCC----------TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHH
T ss_pred             EecCeeEEeccccccEecCCHHHHHHHHhhcC----------CccEEEECcceEcHHHHHHHHhCCcEEEEecCCHHHHH
Confidence            34566666665666777766655556666553          345899999999999998885   36788888876664


Q ss_pred             HHHHHHHHHcCC--CeEEEEecCCCCCCCCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhh
Q 012961          250 ENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPEN  327 (452)
Q Consensus       250 ~~~~~~A~~rg~--~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~  327 (452)
                      .+. +.++..+.  .+.+..+|+..++. .+.||.|++..  .   .....++.++.++|++||.+.+.....-.  ...
T Consensus       145 ~~~-~N~~~n~l~~~v~~~~~D~~~~~~-~~~~D~Ii~~~--p---~~~~~~l~~a~~~l~~gG~lh~~~~~~~~--~~~  215 (260)
T d2frna1         145 FLV-ENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGY--V---VRTHEFIPKALSIAKDGAIIHYHNTVPEK--LMP  215 (260)
T ss_dssp             HHH-HHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECC--C---SSGGGGHHHHHHHEEEEEEEEEEEEEEGG--GTT
T ss_pred             HHH-HHHHHhCCCceEEEEEcchHHhcc-CCCCCEEEECC--C---CchHHHHHHHHhhcCCCCEEEEEeccccc--cch
Confidence            444 33344443  47888899887764 47899998643  2   22345788899999999998764321100  001


Q ss_pred             HHHHHHHHHHHHhCCCEEEEEE
Q 012961          328 RRIWNAMYDLLKSMCWKIVSKK  349 (452)
Q Consensus       328 ~~~~~~l~~ll~~~Gf~~v~~~  349 (452)
                      ....+.+.++++..|+++....
T Consensus       216 ~~~~e~~~~~~~~~g~~v~~~~  237 (260)
T d2frna1         216 REPFETFKRITKEYGYDVEKLN  237 (260)
T ss_dssp             TTTHHHHHHHHHHTTCEEEEEE
T ss_pred             hhHHHHHHHHHHHcCCceEEEE
Confidence            1123567788889999875443


No 50 
>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}
Probab=98.87  E-value=2.4e-09  Score=99.24  Aligned_cols=94  Identities=12%  Similarity=0.106  Sum_probs=65.5

Q ss_pred             CCCEEEEECCCCchHHHHHhh--CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccccc
Q 012961          215 NIRNVLDVGCGVASFGAYLLS--HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW  292 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~--~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~  292 (452)
                      +..+|||||||+|+++..|+.  ..|+++|+++..+..+...  .....++.+..+|........++||.|++..+ +++
T Consensus        70 ~g~~VLdIG~GsGy~ta~La~l~~~V~aiE~~~~~~~~A~~~--~~~~~nv~~~~~d~~~g~~~~~pfD~Iiv~~a-~~~  146 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKL--LSYYNNIKLILGDGTLGYEEEKPYDRVVVWAT-APT  146 (224)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHH--HTTCSSEEEEESCGGGCCGGGCCEEEEEESSB-BSS
T ss_pred             ccceEEEecCCCCHHHHHHHHHhcccccccccHHHHHHHHHH--HhcccccccccCchhhcchhhhhHHHHHhhcc-hhh
Confidence            445899999999999998886  3567777666554433321  12245788888886554444578999998764 554


Q ss_pred             cccHHHHHHHHHHhcCCCcEEEEEe
Q 012961          293 LQRDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       293 ~~d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                      ++      ..+.+.|+|||+|++-.
T Consensus       147 ip------~~l~~qLk~GGrLV~pv  165 (224)
T d1vbfa_         147 LL------CKPYEQLKEGGIMILPI  165 (224)
T ss_dssp             CC------HHHHHTEEEEEEEEEEE
T ss_pred             hh------HHHHHhcCCCCEEEEEE
Confidence            33      35668899999999843


No 51 
>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.72  E-value=7.5e-09  Score=103.74  Aligned_cols=121  Identities=6%  Similarity=0.018  Sum_probs=78.3

Q ss_pred             CCcccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhh----CCCccccCChhhhhHHHHHHHHHc---
Q 012961          187 HFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALER---  259 (452)
Q Consensus       187 ~f~~~~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~----~~v~~vdis~~dis~~~~~~A~~r---  259 (452)
                      .|......++..+.+.+.+        .+..+|||||||+|.++..++.    ..++|+|+++.++..+..+.....   
T Consensus       196 vYGEl~~~~i~~Il~~l~L--------kpgd~fLDLGCG~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~  267 (406)
T d1u2za_         196 VYGELLPNFLSDVYQQCQL--------KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRC  267 (406)
T ss_dssp             CCCCBCHHHHHHHHHHTTC--------CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccCCHHHHHHHHHHhCC--------CCCCEEEeCCCCCcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhh
Confidence            3444556667777777664        3456899999999999998875    257888888877665553332211   


Q ss_pred             ---CC---CeEEE-EecCCCCCCC---CCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961          260 ---GI---PSTLG-VLGTKRLPYP---SRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       260 ---g~---~~~~~-~~d~~~lp~~---d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                         +.   ...+. ..+....++.   -..+|+|++..  +.|.++....|.++.|+|||||+++.+.
T Consensus       268 ~~~g~~~~~~~~~~~~~f~~~~~~d~~~~~adVV~inn--~~f~~~l~~~L~ei~r~LKPGGrIVs~~  333 (406)
T d1u2za_         268 KLYGMRLNNVEFSLKKSFVDNNRVAELIPQCDVILVNN--FLFDEDLNKKVEKILQTAKVGCKIISLK  333 (406)
T ss_dssp             HHTTBCCCCEEEEESSCSTTCHHHHHHGGGCSEEEECC--TTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             hhhccccccceeeeeechhhccccccccccceEEEEec--ccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence               11   22222 2222222211   12468888654  4567788889999999999999998754


No 52 
>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=98.71  E-value=1.9e-08  Score=92.43  Aligned_cols=109  Identities=13%  Similarity=0.133  Sum_probs=74.3

Q ss_pred             HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhh---CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecC
Q 012961          194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS---HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGT  270 (452)
Q Consensus       194 ~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~---~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~  270 (452)
                      .....+.+.+..        .+..+|||||||+|+.+..|+.   ..|++++..+..+..+.....+....++.+..+|.
T Consensus        65 ~~~a~ml~~L~l--------~~g~~VLeIGsGsGY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~  136 (215)
T d1jg1a_          65 HMVAIMLEIANL--------KPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG  136 (215)
T ss_dssp             HHHHHHHHHHTC--------CTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG
T ss_pred             hhHHHHHHhhcc--------CccceEEEecCCCChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEECcc
Confidence            344455566653        2445899999999999988875   35778887765554444333322235688899987


Q ss_pred             CCCCCCCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961          271 KRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       271 ~~lp~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                      .......+.||.|++.. .++..++      .+...|+|||++++..
T Consensus       137 ~~g~~~~~pfD~Iiv~~-a~~~ip~------~l~~qL~~gGrLv~pv  176 (215)
T d1jg1a_         137 SKGFPPKAPYDVIIVTA-GAPKIPE------PLIEQLKIGGKLIIPV  176 (215)
T ss_dssp             GGCCGGGCCEEEEEECS-BBSSCCH------HHHHTEEEEEEEEEEE
T ss_pred             ccCCcccCcceeEEeec-ccccCCH------HHHHhcCCCCEEEEEE
Confidence            66555568899999776 4554332      3556799999999754


No 53 
>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.66  E-value=1.4e-08  Score=93.98  Aligned_cols=96  Identities=16%  Similarity=0.142  Sum_probs=66.2

Q ss_pred             CCCEEEEECCCCchHHHHHhhC----------CCccccCChhhhhHHHHHHHH-----HcCCCeEEEEecCCCCCCCCCC
Q 012961          215 NIRNVLDVGCGVASFGAYLLSH----------DIIAMSLAPNDVHENQIQFAL-----ERGIPSTLGVLGTKRLPYPSRS  279 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~----------~v~~vdis~~dis~~~~~~A~-----~rg~~~~~~~~d~~~lp~~d~s  279 (452)
                      +..+|||||||+|+++..|+..          +|+++|+.+..+..+..+...     ....++.+..+|......+.+.
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~~~~~~  159 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNAP  159 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGGCS
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccccccccc
Confidence            3458999999999999888752          366776666544444322111     1124678888997776666678


Q ss_pred             ceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961          280 FELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       280 FDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                      ||.|++.. .++..+      ..+.+.|||||++++..
T Consensus       160 fD~Iiv~~-a~~~~p------~~l~~~Lk~gG~lV~pv  190 (223)
T d1r18a_         160 YNAIHVGA-AAPDTP------TELINQLASGGRLIVPV  190 (223)
T ss_dssp             EEEEEECS-CBSSCC------HHHHHTEEEEEEEEEEE
T ss_pred             eeeEEEEe-echhch------HHHHHhcCCCcEEEEEE
Confidence            99999876 455433      34678999999999854


No 54 
>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}
Probab=98.65  E-value=1.8e-08  Score=98.00  Aligned_cols=126  Identities=13%  Similarity=0.093  Sum_probs=83.2

Q ss_pred             CCEEEEECCCCchHHHHHhh--CCCccccCChhhhhHHHHHHHHHcCC-CeEEEEecCCC----CCCCCCCceEEEeccc
Q 012961          216 IRNVLDVGCGVASFGAYLLS--HDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKR----LPYPSRSFELAHCSRC  288 (452)
Q Consensus       216 ~~~VLDIGCG~G~~~~~La~--~~v~~vdis~~dis~~~~~~A~~rg~-~~~~~~~d~~~----lp~~d~sFDlVv~s~~  288 (452)
                      +.+|||++||+|.++.+++.  ..|+++|+++..+..+.. .+...+. ++.++..|..+    ++...++||+|++..-
T Consensus       146 g~rVLDl~~gtG~~s~~~a~g~~~V~~vD~s~~al~~a~~-n~~~ngl~~~~~i~~d~~~~~~~~~~~~~~fD~Vi~DpP  224 (318)
T d1wxxa2         146 GERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEE-NARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPP  224 (318)
T ss_dssp             EEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHH-HHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCC
T ss_pred             CCeeeccCCCCcHHHHHHHhcCCcEEeecchHHHHHHHHH-HHHHcCCCCcceeeccHHHHhhhhHhhhcCCCEEEEcCC
Confidence            45899999999999999875  467888888777766553 3334454 57888888644    3344578999997431


Q ss_pred             cc--------cccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEE
Q 012961          289 RI--------DWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKI  345 (452)
Q Consensus       289 ~l--------~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~  345 (452)
                      .+        ....+...++..+.++|+|||.+++++-.... .  .....+.+.+.+..+|.+.
T Consensus       225 ~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~scs~~~-~--~~~f~~~v~~a~~~a~~~~  286 (318)
T d1wxxa2         225 AFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHM-T--EPLFYAMVAEAAQDAHRLL  286 (318)
T ss_dssp             CSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS-C--HHHHHHHHHHHHHHTTCCE
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCCccc-C--HHHHHHHHHHHHHHcCCCE
Confidence            11        11223345888999999999999997743321 1  1112244556667777544


No 55 
>d1af7a2 c.66.1.8 (A:92-284) Chemotaxis receptor methyltransferase CheR, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=98.63  E-value=4.7e-08  Score=88.15  Aligned_cols=103  Identities=11%  Similarity=0.138  Sum_probs=64.8

Q ss_pred             CCCEEEEECCCCch----HHHHHhhC---CCccccCChhhhhHHHHHHHHHc--------CC------------------
Q 012961          215 NIRNVLDVGCGVAS----FGAYLLSH---DIIAMSLAPNDVHENQIQFALER--------GI------------------  261 (452)
Q Consensus       215 ~~~~VLDIGCG~G~----~~~~La~~---~v~~vdis~~dis~~~~~~A~~r--------g~------------------  261 (452)
                      +..+|+++|||+|.    ++..+.+.   .-..+.+.+.|++...++.|++.        ..                  
T Consensus        24 ~~lrIwsaGCstGeE~YSlA~~l~e~~~~~~~~~~I~atDi~~~~l~~A~~g~y~~~~~~~~~~~~~~~yf~~~~~~~~~  103 (193)
T d1af7a2          24 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG  103 (193)
T ss_dssp             SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred             CCeEEEEeCCCCchhHHHHHHHHHHhhhhcCCceEEEeecCChHHhhHhhcCcccHHHHhhhhHHHHhhceeecCCCccc
Confidence            44589999999995    44444431   11234566666666766666532        00                  


Q ss_pred             ----------CeEEEEecCCCC-CCCCCCceEEEeccccccccccH--HHHHHHHHHhcCCCcEEEEEeC
Q 012961          262 ----------PSTLGVLGTKRL-PYPSRSFELAHCSRCRIDWLQRD--GILLLELDRLLRPGGYFVYSSP  318 (452)
Q Consensus       262 ----------~~~~~~~d~~~l-p~~d~sFDlVv~s~~~l~~~~d~--~~~L~ei~RvLkPGG~lvi~~p  318 (452)
                                .+.+...+.... +.+.+.||+|+|.+ ++.++.+.  ..+++.++++|+|||+|++...
T Consensus       104 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~fDvI~CRN-VLiYf~~~~~~~vl~~l~~~L~pGG~L~lG~s  172 (193)
T d1af7a2         104 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRN-VMIYFDKTTQEDILRRFVPLLKPDGLLFAGHS  172 (193)
T ss_dssp             EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECS-SGGGSCHHHHHHHHHHHGGGEEEEEEEEECTT
T ss_pred             eeehHHHHHHHHHHhhhhccccccCCCCCccEEEeeh-hHHhcCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence                      012222332222 23457899999999 46665544  5699999999999999998543


No 56 
>d1fp1d2 c.66.1.12 (D:129-372) Chalcone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=98.63  E-value=8.1e-08  Score=89.80  Aligned_cols=124  Identities=17%  Similarity=0.095  Sum_probs=81.3

Q ss_pred             CCCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccc
Q 012961          214 GNIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCR  289 (452)
Q Consensus       214 ~~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~  289 (452)
                      ...++|||||||+|.++..++++    +++..|+     .+ .++.+. ...++.+..+|..+ +.|  ..|++++...+
T Consensus        80 ~~~~~vlDiGGG~G~~~~~l~~~~P~l~~~v~Dl-----p~-vi~~~~-~~~ri~~~~gd~~~-~~p--~~D~~~l~~vL  149 (244)
T d1fp1d2          80 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-----PQ-VIENAP-PLSGIEHVGGDMFA-SVP--QGDAMILKAVC  149 (244)
T ss_dssp             TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-----HH-HHTTCC-CCTTEEEEECCTTT-CCC--CEEEEEEESSG
T ss_pred             cCCcEEEEecCCCcHHHHHHHHHCCCCeEEEecc-----hh-hhhccC-CCCCeEEecCCccc-ccc--cceEEEEehhh
Confidence            34579999999999999999874    3334443     22 122111 13457888888643 344  35999998854


Q ss_pred             ccccccH--HHHHHHHHHhcCCCcEEEEEeC---CCCCCChhh-------H----------HHHHHHHHHHHhCCCEEEE
Q 012961          290 IDWLQRD--GILLLELDRLLRPGGYFVYSSP---EAYAHDPEN-------R----------RIWNAMYDLLKSMCWKIVS  347 (452)
Q Consensus       290 l~~~~d~--~~~L~ei~RvLkPGG~lvi~~p---~~~~~~~~~-------~----------~~~~~l~~ll~~~Gf~~v~  347 (452)
                      .+| ++.  ..+|+++++.|+|||.++|.+.   .........       .          +..+++.++++++||+.++
T Consensus       150 h~~-~de~~~~iL~~~~~aL~pgg~llI~e~v~~~~~~~~~~~~~~~~~d~~m~~~~~g~ert~~e~~~ll~~AGF~~v~  228 (244)
T d1fp1d2         150 HNW-SDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQ  228 (244)
T ss_dssp             GGS-CHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSEEE
T ss_pred             hhC-CHHHHHHHHHHHHHHcCCCcEEEEEEEEecCCCCCchHHHHHHHHHHHHHhhCCCcCCCHHHHHHHHHHcCCCceE
Confidence            444 443  4589999999999999998763   211111110       0          0136899999999998876


Q ss_pred             E
Q 012961          348 K  348 (452)
Q Consensus       348 ~  348 (452)
                      .
T Consensus       229 v  229 (244)
T d1fp1d2         229 V  229 (244)
T ss_dssp             E
T ss_pred             E
Confidence            4


No 57 
>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=98.57  E-value=6.7e-08  Score=94.05  Aligned_cols=125  Identities=14%  Similarity=0.090  Sum_probs=80.4

Q ss_pred             CCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCC----CCCCCCCceEEEec
Q 012961          216 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKR----LPYPSRSFELAHCS  286 (452)
Q Consensus       216 ~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~----lp~~d~sFDlVv~s  286 (452)
                      ..+|||+|||+|.++..++..   .|+++|+++..+..+. +.++..|.  ++.+..+|+.+    ++....+||+|++.
T Consensus       146 g~~VLDl~~g~G~~si~~a~~ga~~V~~vD~s~~al~~a~-~N~~~ngl~~~~~~~~~d~~~~~~~~~~~~~~fD~Vi~D  224 (324)
T d2as0a2         146 GDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAK-ENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLD  224 (324)
T ss_dssp             TCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHH-HHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred             CCeeecccCcccchhhhhhhcCCcEEEeecCCHHHHHHHH-HHHHHcCCCccceeeechhhhhhHHHHhccCCCCchhcC
Confidence            458999999999999988763   5778877776665554 33444454  46778887543    23345789999974


Q ss_pred             cccccc--------cccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHH-HHHHHHHHhCCCEE
Q 012961          287 RCRIDW--------LQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIW-NAMYDLLKSMCWKI  345 (452)
Q Consensus       287 ~~~l~~--------~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~-~~l~~ll~~~Gf~~  345 (452)
                      .-.+.-        ..+...++..+.++|+|||.|++++.....    ..+.| +.+.+.+.++|-..
T Consensus       225 pP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~s~~~----~~~~f~~~v~~a~~~~gr~~  288 (324)
T d2as0a2         225 PPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHV----DLQMFKDMIIAAGAKAGKFL  288 (324)
T ss_dssp             CCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTS----CHHHHHHHHHHHHHHTTEEE
T ss_pred             CccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeCCccC----CHHHHHHHHHHHHHHcCCeE
Confidence            311110        112345888999999999999998754321    11223 44455566666443


No 58 
>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}
Probab=98.46  E-value=4.2e-07  Score=88.09  Aligned_cols=129  Identities=11%  Similarity=0.023  Sum_probs=84.0

Q ss_pred             CCEEEEECCCCchHHHHHhh---CCCccccCChhhhhHHHHHHHHHcC--CCeEEEEecCCCC----CCCCCCceEEEec
Q 012961          216 IRNVLDVGCGVASFGAYLLS---HDIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRL----PYPSRSFELAHCS  286 (452)
Q Consensus       216 ~~~VLDIGCG~G~~~~~La~---~~v~~vdis~~dis~~~~~~A~~rg--~~~~~~~~d~~~l----p~~d~sFDlVv~s  286 (452)
                      +++|||+.||+|.++..++.   ..|+++|+++..+..+..+......  .++.++..|+.+.    .-..++||+|++-
T Consensus       145 g~~VLdlf~~~G~~sl~aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~~~l~~~~~~~~~fD~Ii~D  224 (317)
T d2b78a2         145 GKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIID  224 (317)
T ss_dssp             TCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred             CCceeecCCCCcHHHHHHHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHHHHHHHHHhhcCCCCEEEEc
Confidence            45899999999999988764   2588899988877666644443321  2477888886332    2234689999974


Q ss_pred             cc--------cccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHH-HHHHHHHHhCCCEEEEE
Q 012961          287 RC--------RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIW-NAMYDLLKSMCWKIVSK  348 (452)
Q Consensus       287 ~~--------~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~-~~l~~ll~~~Gf~~v~~  348 (452)
                      --        ......+...++..+.++|+|||.|++++..... .   ...| ..+...+...+..+...
T Consensus       225 PP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~scs~~~-~---~~~f~~~v~~a~~~~~~~~~~~  291 (317)
T d2b78a2         225 PPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANM-T---VSQFKKQIEKGFGKQKHTYLDL  291 (317)
T ss_dssp             CCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS-C---HHHHHHHHHHHHTTCCCEEEEE
T ss_pred             ChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCCccC-C---HHHHHHHHHHHHHHcCCeEEEe
Confidence            21        1111233456899999999999999998754321 1   1222 33445566667665433


No 59 
>d1fp2a2 c.66.1.12 (A:109-352) Isoflavone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=98.45  E-value=2.8e-07  Score=86.02  Aligned_cols=125  Identities=9%  Similarity=0.010  Sum_probs=82.1

Q ss_pred             CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccc
Q 012961          215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRI  290 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l  290 (452)
                      ...+|||||||+|.++..++++    +++..|+     .+ .++.+.. ..++.+..+|... +.+  .+|++++.+. +
T Consensus        80 ~~~~vvDvGGG~G~~~~~l~~~~P~l~~~v~Dl-----p~-vi~~~~~-~~rv~~~~gD~f~-~~p--~aD~~~l~~v-L  148 (244)
T d1fp2a2          80 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-----PQ-VVENLSG-SNNLTYVGGDMFT-SIP--NADAVLLKYI-L  148 (244)
T ss_dssp             TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-----HH-HHTTCCC-BTTEEEEECCTTT-CCC--CCSEEEEESC-G
T ss_pred             CceEEEEecCCccHHHHHHHHhCCCCeEEEecC-----HH-HHHhCcc-cCceEEEecCccc-CCC--CCcEEEEEee-c
Confidence            3458999999999999999874    3344443     22 2222221 3468888888654 333  5799999885 5


Q ss_pred             cccccH--HHHHHHHHHhcCCC---cEEEEEeCCCCC--CChhh-----------------HHHHHHHHHHHHhCCCEEE
Q 012961          291 DWLQRD--GILLLELDRLLRPG---GYFVYSSPEAYA--HDPEN-----------------RRIWNAMYDLLKSMCWKIV  346 (452)
Q Consensus       291 ~~~~d~--~~~L~ei~RvLkPG---G~lvi~~p~~~~--~~~~~-----------------~~~~~~l~~ll~~~Gf~~v  346 (452)
                      |...+.  ..+|+++++.|+||   |+++|.+.-...  .....                 .+..+++.++++++||+.+
T Consensus       149 Hdw~d~~~~~iL~~~~~al~pgg~~~~lli~e~~~~~~~~~~~~~~~~~~~dl~m~~~~G~ert~~e~~~ll~~AGf~~~  228 (244)
T d1fp2a2         149 HNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHY  228 (244)
T ss_dssp             GGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCCEE
T ss_pred             ccCChHHHHHHHHHHHHHcCcccCCcEEEEEEeecCCCCCCchHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHcCCceE
Confidence            544444  45899999999999   778876531110  11100                 0123689999999999988


Q ss_pred             EEEe
Q 012961          347 SKKD  350 (452)
Q Consensus       347 ~~~~  350 (452)
                      +...
T Consensus       229 ~i~~  232 (244)
T d1fp2a2         229 KISP  232 (244)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            7654


No 60 
>d1kyza2 c.66.1.12 (A:120-362) Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=98.39  E-value=2.7e-07  Score=85.92  Aligned_cols=125  Identities=14%  Similarity=0.064  Sum_probs=80.0

Q ss_pred             CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccc
Q 012961          215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRI  290 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l  290 (452)
                      ..++|||||||+|.++..++++    +++..|+... +     +.+. ...++.+...|... +.|.  .|+++....+.
T Consensus        81 ~~~~vvDvGGG~G~~~~~l~~~~P~l~~~v~Dlp~v-i-----~~~~-~~~r~~~~~~d~~~-~~P~--ad~~~l~~vlh  150 (243)
T d1kyza2          81 GLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHV-I-----EDAP-SYPGVEHVGGDMFV-SIPK--ADAVFMKWICH  150 (243)
T ss_dssp             SCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECTTT-T-----TTCC-CCTTEEEEECCTTT-CCCC--CSCEECSSSST
T ss_pred             CCcEEEEecCCCcHHHHHHHHHCCCCeEEEcccHHh-h-----hhcc-cCCceEEecccccc-cCCC--cceEEEEEEee
Confidence            4568999999999999999973    4555665432 1     1111 23457778777633 3443  45566666444


Q ss_pred             ccc-ccHHHHHHHHHHhcCCCcEEEEEeCCC---CCCChhh------------------HHHHHHHHHHHHhCCCEEEEE
Q 012961          291 DWL-QRDGILLLELDRLLRPGGYFVYSSPEA---YAHDPEN------------------RRIWNAMYDLLKSMCWKIVSK  348 (452)
Q Consensus       291 ~~~-~d~~~~L~ei~RvLkPGG~lvi~~p~~---~~~~~~~------------------~~~~~~l~~ll~~~Gf~~v~~  348 (452)
                      .|. ++...+|+++++.|+|||.++|.+.-.   .......                  .+..++++++++++||+.++.
T Consensus       151 ~~~d~~~~~iL~~~~~al~pgg~~li~d~~~~~~~~~~~~~~~~~~~d~~ml~~~~~g~ert~~e~~~ll~~AGf~~vkv  230 (243)
T d1kyza2         151 DWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKV  230 (243)
T ss_dssp             TSCHHHHHHHHHHHHHHCCSSSCEEEEECEECSSCCCCHHHHHHHHHHHHHHHHCSSCCCEEHHHHHHHHHHHCCSCEEE
T ss_pred             cCCHHHHHHHHHHHHHhcCCCceEEEEEEEecCCCCCchhhHHHHHHHHHHHhhCCCCCcCCHHHHHHHHHHcCCCcEEE
Confidence            443 233569999999999999999876421   1111000                  012358899999999988865


Q ss_pred             E
Q 012961          349 K  349 (452)
Q Consensus       349 ~  349 (452)
                      .
T Consensus       231 ~  231 (243)
T d1kyza2         231 H  231 (243)
T ss_dssp             E
T ss_pred             E
Confidence            4


No 61 
>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=98.32  E-value=1.5e-06  Score=83.66  Aligned_cols=130  Identities=7%  Similarity=0.031  Sum_probs=78.3

Q ss_pred             CCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcC--CCeEEEEecCCCC----CCCCCCceEEEec
Q 012961          215 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRL----PYPSRSFELAHCS  286 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg--~~~~~~~~d~~~l----p~~d~sFDlVv~s  286 (452)
                      ++.+|||++||+|.++.+++..  .|+++|.+...+..+..+.....-  .++.+++.|+...    ....+.||+|++.
T Consensus       132 ~~~rVLdlf~~tG~~sl~aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~~~l~~~~~~~~~fD~IilD  211 (309)
T d2igta1         132 RPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTD  211 (309)
T ss_dssp             SCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEEC
T ss_pred             CCCeEEEecCCCcHHHHHHHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHHHhHHHHhhcCCCCCEEEEC
Confidence            4568999999999999998863  577777766666555543333221  2477888886432    1234689999973


Q ss_pred             cccc-------cc--cccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEE
Q 012961          287 RCRI-------DW--LQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIV  346 (452)
Q Consensus       287 ~~~l-------~~--~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v  346 (452)
                      --.+       .+  ..+...++..+.++|+|||.+++.+.........  ...+.+.+.+..+|-.+.
T Consensus       212 PP~f~~~~~~~~~~~~~~~~~l~~~~~~ll~~~g~~ll~t~~s~~~s~~--~~~~~~~~~~~~ag~~v~  278 (309)
T d2igta1         212 PPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFY--SMHELMRETMRGAGGVVA  278 (309)
T ss_dssp             CCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHH--HHHHHHHHHTTTSCSEEE
T ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHhcCCCCCEEEEecCCCCCCHH--HHHHHHHHHHHhcCCcce
Confidence            2111       11  1233557788899999999766654322212211  112334455666776543


No 62 
>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=98.28  E-value=4.3e-07  Score=82.02  Aligned_cols=65  Identities=14%  Similarity=0.137  Sum_probs=50.1

Q ss_pred             CCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecc
Q 012961          215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSR  287 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~  287 (452)
                      .+++|||+|||+|.++..++..   .|+++|     +++.+++.|+++..++.+...|..+++   +.||+|+++-
T Consensus        48 ~Gk~VLDlGcGtG~l~i~a~~~ga~~V~~vD-----id~~a~~~ar~N~~~~~~~~~D~~~l~---~~fD~Vi~NP  115 (197)
T d1ne2a_          48 GGRSVIDAGTGNGILACGSYLLGAESVTAFD-----IDPDAIETAKRNCGGVNFMVADVSEIS---GKYDTWIMNP  115 (197)
T ss_dssp             BTSEEEEETCTTCHHHHHHHHTTBSEEEEEE-----SCHHHHHHHHHHCTTSEEEECCGGGCC---CCEEEEEECC
T ss_pred             CCCEEEEeCCCCcHHHHHHHHcCCCcccccc-----cCHHHHHHHHHccccccEEEEehhhcC---CcceEEEeCc
Confidence            3458999999999988777653   466665     455666777777777899999988875   6799999863


No 63 
>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}
Probab=98.26  E-value=2.8e-07  Score=79.63  Aligned_cols=101  Identities=16%  Similarity=0.102  Sum_probs=66.1

Q ss_pred             CCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCC-CCCCCCCceEEEeccc
Q 012961          215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKR-LPYPSRSFELAHCSRC  288 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~-lp~~d~sFDlVv~s~~  288 (452)
                      .+.+|||+|||+|.++..++.+   .|+++|.++..+.... +.+...+.  ++.+...|+.. +....++||+|++.- 
T Consensus        14 ~g~~vlDl~~GtG~~~iea~~rga~~v~~ve~~~~a~~~~~-~n~~~~~~~~~~~ii~~D~~~~l~~~~~~fDiIf~DP-   91 (152)
T d2esra1          14 NGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQ-DNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDP-   91 (152)
T ss_dssp             CSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHH-HHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECC-
T ss_pred             CCCeEEEcCCccCHHHHHHHHhCcceeeeehhchhhhhhhh-hhhhhcccccchhhhcccccccccccccccceeEech-
Confidence            3458999999999999877653   5778877776654443 33333333  36777777654 344567899999642 


Q ss_pred             ccccc-ccHHHHHHHHH--HhcCCCcEEEEEeCC
Q 012961          289 RIDWL-QRDGILLLELD--RLLRPGGYFVYSSPE  319 (452)
Q Consensus       289 ~l~~~-~d~~~~L~ei~--RvLkPGG~lvi~~p~  319 (452)
                        +|. ......+..+.  ++|+|||.+++..+.
T Consensus        92 --Py~~~~~~~~l~~i~~~~~L~~~g~iiiE~~~  123 (152)
T d2esra1          92 --PYAKETIVATIEALAAKNLLSEQVMVVCETDK  123 (152)
T ss_dssp             --SSHHHHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred             --hhccchHHHHHHHHHHCCCcCCCeEEEEEeCC
Confidence              221 22234555553  579999999997643


No 64 
>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}
Probab=98.23  E-value=6.1e-07  Score=79.05  Aligned_cols=99  Identities=19%  Similarity=0.250  Sum_probs=61.8

Q ss_pred             CCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCC----CCCCCCCceEEEecccc
Q 012961          216 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKR----LPYPSRSFELAHCSRCR  289 (452)
Q Consensus       216 ~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~----lp~~d~sFDlVv~s~~~  289 (452)
                      +.+|||+|||+|.++..++.+  .++++|.++..+..+. +.++..+....+...+...    ......+||+|++.-  
T Consensus        42 g~~vLDl~~G~G~~~i~a~~~ga~vv~vD~~~~a~~~~~-~N~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~If~DP--  118 (171)
T d1ws6a1          42 RGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLK-ENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAP--  118 (171)
T ss_dssp             CCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHH-HHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECC--
T ss_pred             CCeEEEeccccchhhhhhhhccchhhhcccCHHHHhhhh-HHHHhhccccceeeeehhcccccccccCCccceeEEcc--
Confidence            348999999999999987764  4556666665554333 3334446666666555432    123456899999753  


Q ss_pred             ccccccHHHHHHHH--HHhcCCCcEEEEEeC
Q 012961          290 IDWLQRDGILLLEL--DRLLRPGGYFVYSSP  318 (452)
Q Consensus       290 l~~~~d~~~~L~ei--~RvLkPGG~lvi~~p  318 (452)
                       +|..+....+.++  ..+|+|||++++..+
T Consensus       119 -PY~~~~~~~l~~l~~~~ll~~~g~ivie~~  148 (171)
T d1ws6a1         119 -PYAMDLAALFGELLASGLVEAGGLYVLQHP  148 (171)
T ss_dssp             -CTTSCTTHHHHHHHHHTCEEEEEEEEEEEE
T ss_pred             -ccccCHHHHHHHHHHcCCcCCCeEEEEEec
Confidence             1222323334443  357999999998764


No 65 
>d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.22  E-value=1e-05  Score=75.38  Aligned_cols=145  Identities=10%  Similarity=0.086  Sum_probs=84.4

Q ss_pred             HHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhh----CCCccccCChhhhhHHHHHHHHHcCCC--eEE
Q 012961          192 ADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGIP--STL  265 (452)
Q Consensus       192 ~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~----~~v~~vdis~~dis~~~~~~A~~rg~~--~~~  265 (452)
                      ...|...+.+++....   .......+|||||||+|.++..|+.    ..++++|+++..+..+..+.. ..+..  +.+
T Consensus        41 r~~~~~~i~~l~~~~~---~~~~~~~~~LDiGtGsg~I~~~l~~~~~~~~~~~~Di~~~al~~A~~N~~-~n~l~~~~~~  116 (250)
T d2h00a1          41 RLNYIHWVEDLIGHQD---SDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVE-QNNLSDLIKV  116 (250)
T ss_dssp             HHHHHHHHHHHHCCCC---GGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHH-HTTCTTTEEE
T ss_pred             HHHHHHHHHHHhhhhc---cCccccceEEEeCCCchHHHHHHHHhCCCccccceecCHHHHHHHHHHHH-HhCCCcceee
Confidence            4457777777765322   1123446899999999999988886    367778777766655553333 33333  444


Q ss_pred             EEecCCCC------CCCCCCceEEEeccccccccc----------------------------------cHHHHHHHHHH
Q 012961          266 GVLGTKRL------PYPSRSFELAHCSRCRIDWLQ----------------------------------RDGILLLELDR  305 (452)
Q Consensus       266 ~~~d~~~l------p~~d~sFDlVv~s~~~l~~~~----------------------------------d~~~~L~ei~R  305 (452)
                      ...+....      ...+++||+|+|+--.+.-.+                                  ....++++..+
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~fD~ivsNPPY~~~~e~~~~~~~~k~~~~~p~~~~~~~~~el~~~gGe~~F~~~ii~es~~  196 (250)
T d2h00a1         117 VKVPQKTLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQ  196 (250)
T ss_dssp             EECCTTCSSTTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHHH
T ss_pred             eeeccHHhhhhhhhhcccCceeEEEecCcccccchhhhccccccccccCchhhcCccccccccccchhhHHHHHHHHHHH
Confidence            44433221      123568999999642221000                                  01235666677


Q ss_pred             hcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEE
Q 012961          306 LLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK  348 (452)
Q Consensus       306 vLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~  348 (452)
                      .++..|.+..-...        ....+.+..++++.|+..+..
T Consensus       197 ~~~~~g~~t~~ig~--------~~~l~~i~~~L~~~g~~~i~~  231 (250)
T d2h00a1         197 LKKRLRWYSCMLGK--------KCSLAPLKEELRIQGVPKVTY  231 (250)
T ss_dssp             HGGGBSCEEEEESS--------TTSHHHHHHHHHHTTCSEEEE
T ss_pred             HhhcCcEEEEEecc--------hhhHHHHHHHHHHcCCCeEEE
Confidence            78888877532210        012456788888999865543


No 66 
>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.19  E-value=1.5e-06  Score=79.71  Aligned_cols=112  Identities=15%  Similarity=0.152  Sum_probs=75.2

Q ss_pred             cHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHcC--CCe
Q 012961          191 GADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERG--IPS  263 (452)
Q Consensus       191 ~~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~rg--~~~  263 (452)
                      ...++...+.++..           +++|||||||+|+.+.+++..     .++++|..+.....+. +...+.|  ..+
T Consensus        46 ~~g~lL~~L~~~~~-----------~k~vLEiGt~~GyStl~~a~al~~~g~i~tie~~~~~~~~A~-~~~~~ag~~~~i  113 (219)
T d2avda1          46 EQAQLLANLARLIQ-----------AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGR-PLWRQAEAEHKI  113 (219)
T ss_dssp             HHHHHHHHHHHHTT-----------CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHH-HHHHHTTCTTTE
T ss_pred             HHHHHHHHHHHccC-----------CCeEEEEechhhHHHHHHHHhCCCCceEEEEeechhHHHHHH-HHHHhcCccceE
Confidence            34455555555543           458999999999999999863     5677777765554443 3333333  347


Q ss_pred             EEEEecCCC-CC-----CCCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961          264 TLGVLGTKR-LP-----YPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP  318 (452)
Q Consensus       264 ~~~~~d~~~-lp-----~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p  318 (452)
                      .+.++++.+ ++     ...++||+|+...    ........+..+.++|+|||.+++...
T Consensus       114 ~~~~Gda~e~l~~~~~~~~~~~fD~ifiD~----dk~~y~~~~~~~~~lL~~GGvii~Dn~  170 (219)
T d2avda1         114 DLRLKPALETLDELLAAGEAGTFDVAVVDA----DKENCSAYYERCLQLLRPGGILAVLRV  170 (219)
T ss_dssp             EEEESCHHHHHHHHHHTTCTTCEEEEEECS----CSTTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             EEEEeehhhcchhhhhhcccCCccEEEEeC----CHHHHHHHHHHHHHHhcCCcEEEEeCC
Confidence            778877533 21     2356899999543    234446688999999999999998553


No 67 
>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=98.19  E-value=6.1e-06  Score=74.36  Aligned_cols=121  Identities=10%  Similarity=0.027  Sum_probs=70.1

Q ss_pred             CCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccccc
Q 012961          215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRID  291 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~  291 (452)
                      .+.+|||+|||+|.++..++..   .|+++|+++..+..+. +.++..+....+...|...++   +.||+|+++-- ..
T Consensus        46 ~g~~vLDlg~GtG~l~i~a~~~g~~~v~~vdi~~~~~~~a~-~N~~~~~~~~~~~~~d~~~~~---~~fD~Vi~nPP-~~  120 (201)
T d1wy7a1          46 EGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLI-ENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPP-FG  120 (201)
T ss_dssp             TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHH-HHTGGGTTSEEEEESCGGGCC---CCCSEEEECCC-CS
T ss_pred             CCCEEEECcCcchHHHHHHHHcCCCEEEEEcCcHHHHHHHH-HHHHHcCCCceEEECchhhhC---CcCcEEEEcCc-cc
Confidence            3458999999999999877653   4677776665554333 233344677888888877763   67999998642 21


Q ss_pred             cccc--HHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEEe
Q 012961          292 WLQR--DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD  350 (452)
Q Consensus       292 ~~~d--~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~  350 (452)
                      ....  ...++....   .+++.+......    ..   ....-++.+....||.+.....
T Consensus       121 ~~~~~~d~~~l~~~~---~~~~~v~~ih~~----~~---~~~~~i~~~~~~~g~~i~~~~~  171 (201)
T d1wy7a1         121 SQRKHADRPFLLKAF---EISDVVYSIHLA----KP---EVRRFIEKFSWEHGFVVTHRLT  171 (201)
T ss_dssp             SSSTTTTHHHHHHHH---HHCSEEEEEEEC----CH---HHHHHHHHHHHHTTEEEEEEEE
T ss_pred             cccccccHHHHHHHH---hhcccchhcccc----hH---HHHHHHHHHHhhcCceEEEEEE
Confidence            1111  122333333   334443332211    11   1123456778889997765443


No 68 
>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.17  E-value=6.4e-07  Score=81.85  Aligned_cols=95  Identities=23%  Similarity=0.330  Sum_probs=64.1

Q ss_pred             CCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCC-C-----CCCCCceE
Q 012961          216 IRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRL-P-----YPSRSFEL  282 (452)
Q Consensus       216 ~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~l-p-----~~d~sFDl  282 (452)
                      +++|||||||+|..+..|+..     .++++|+.+.....+. +.....|.  ++.+..++..+. +     +..++||+
T Consensus        57 pk~ILEiGt~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~-~~~~~~gl~~~i~l~~Gd~~e~l~~l~~~~~~~~~D~  135 (214)
T d2cl5a1          57 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQ-QMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDM  135 (214)
T ss_dssp             CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHH-HHHHHHTCGGGEEEEESCHHHHGGGHHHHSCCCCEEE
T ss_pred             CCEEEEEccCchhHHHHHHHhCCCccEEEEEeccHHHHHHHH-HHHHHcCCCccceeeeccccccccchhhcccccccce
Confidence            458999999999999999863     5677777765554443 22233343  478888885442 2     34568999


Q ss_pred             EEecccccccccc--HHHHHHHHHHhcCCCcEEEE
Q 012961          283 AHCSRCRIDWLQR--DGILLLELDRLLRPGGYFVY  315 (452)
Q Consensus       283 Vv~s~~~l~~~~d--~~~~L~ei~RvLkPGG~lvi  315 (452)
                      |+.-.    +...  ....+.+..++|||||++++
T Consensus       136 ifiD~----~~~~~~~~~~l~~~~~lLkpGGvIv~  166 (214)
T d2cl5a1         136 VFLDH----WKDRYLPDTLLLEKCGLLRKGTVLLA  166 (214)
T ss_dssp             EEECS----CGGGHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             eeecc----cccccccHHHHHHHhCccCCCcEEEE
Confidence            98643    1222  12357788899999998765


No 69 
>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}
Probab=98.05  E-value=3.4e-06  Score=75.68  Aligned_cols=102  Identities=19%  Similarity=0.156  Sum_probs=70.0

Q ss_pred             CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHc----CCCeEEEEecCCCCC-----CCCCCceEEEe
Q 012961          215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GIPSTLGVLGTKRLP-----YPSRSFELAHC  285 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~r----g~~~~~~~~d~~~lp-----~~d~sFDlVv~  285 (452)
                      +...+||++||+|.++..+++.. ....+.+.|.++.+++.|+++    +.++.+...+..++.     +..++||.|+.
T Consensus        23 ~~~~~lD~t~G~Gghs~~il~~~-~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~~~~~~~~~vdgIl~  101 (192)
T d1m6ya2          23 DEKIILDCTVGEGGHSRAILEHC-PGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILM  101 (192)
T ss_dssp             TTCEEEETTCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEE
T ss_pred             CCCEEEEecCCCcHHHHHHHhcC-CCCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHHHHHcCCCCcceeee
Confidence            44589999999999999998741 223444555566666666654    456788887765542     44578999986


Q ss_pred             cccccc--------ccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961          286 SRCRID--------WLQRDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       286 s~~~l~--------~~~d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                      -..+-.        -+......|..+.++|+|||.+++..
T Consensus       102 DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~gG~l~ii~  141 (192)
T d1m6ya2         102 DLGVSTYQLKGENRELENLKEFLKKAEDLLNPGGRIVVIS  141 (192)
T ss_dssp             ECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEEEEEEEEE
T ss_pred             ccchhHhhhhhhhccchhHHHHHHHHHHhcCCCCeeeeec
Confidence            432111        12233568999999999999999876


No 70 
>d2f8la1 c.66.1.45 (A:2-329) Hypothetical protein Lmo1582 {Listeria monocytogenes [TaxId: 1639]}
Probab=98.00  E-value=8.8e-06  Score=78.31  Aligned_cols=122  Identities=12%  Similarity=0.115  Sum_probs=75.4

Q ss_pred             CCCEEEEECCCCchHHHHHhh----C-----CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEe
Q 012961          215 NIRNVLDVGCGVASFGAYLLS----H-----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHC  285 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~----~-----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~  285 (452)
                      ...+|||.+||+|.++..+..    .     .++|+|+++..+..+.... ...+....+...|..... +...||+|++
T Consensus       117 ~~~~vlDp~~GsG~~l~~~~~~l~~~~~~~~~~~g~di~~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~-~~~~fD~vi~  194 (328)
T d2f8la1         117 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGA-DLQRQKMTLLHQDGLANL-LVDPVDVVIS  194 (328)
T ss_dssp             SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHH-HHHTCCCEEEESCTTSCC-CCCCEEEEEE
T ss_pred             CCCEEEeCCCCcchhHHHHHHHHHhccCccceEEEecccHHHHHHHHHHH-HHhhhhhhhhcccccccc-cccccccccc
Confidence            445899999999999888753    1     3556666655544333222 233566677776654433 3468999998


Q ss_pred             ccccccccc-----------------cHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCC
Q 012961          286 SRCRIDWLQ-----------------RDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMC  342 (452)
Q Consensus       286 s~~~l~~~~-----------------d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~G  342 (452)
                      +--......                 -...++..+.+.|+|||++++..|..+.....    ...+++.+-+.+
T Consensus       195 NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~Fi~~~~~~Lk~~G~~~~I~p~~~l~~~~----~~~lR~~L~~~~  264 (328)
T d2f8la1         195 DLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSD----FAKVDKFIKKNG  264 (328)
T ss_dssp             ECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTT----HHHHHHHHHHHE
T ss_pred             CCCCCCCccchhhhhcchhcccCcchHHHHHHHHHHHhcCCCCceEEEecCccccCch----hHHHHHHHHhCC
Confidence            642111000                 11237999999999999999998876543322    344555544433


No 71 
>d2ih2a1 c.66.1.27 (A:21-243) DNA methylase TaqI, N-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=97.91  E-value=5.6e-06  Score=74.48  Aligned_cols=113  Identities=15%  Similarity=0.117  Sum_probs=71.8

Q ss_pred             HHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHcCCCeEEEEec
Q 012961          195 YILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLG  269 (452)
Q Consensus       195 y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d  269 (452)
                      ..+.+.+++..        .+..+|||.|||+|.++..+.+.     .+.++|+.+..+.         ......+...+
T Consensus         7 i~~~m~~l~~~--------~~~~~IlDp~~G~G~fl~~~~~~~~~~~~i~g~ei~~~~~~---------~~~~~~~~~~~   69 (223)
T d2ih2a1           7 VVDFMVSLAEA--------PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALD---------LPPWAEGILAD   69 (223)
T ss_dssp             HHHHHHHHCCC--------CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCC---------CCTTEEEEESC
T ss_pred             HHHHHHHhcCC--------CCcCEEEECCCchHHHHHHHHHhccccceEEeeecCHHHHh---------hcccceeeeee
Confidence            44555665542        24458999999999998887752     3566666554321         12235666666


Q ss_pred             CCCCCCCCCCceEEEecccccccc---------------------------c-cHHHHHHHHHHhcCCCcEEEEEeCCCC
Q 012961          270 TKRLPYPSRSFELAHCSRCRIDWL---------------------------Q-RDGILLLELDRLLRPGGYFVYSSPEAY  321 (452)
Q Consensus       270 ~~~lp~~d~sFDlVv~s~~~l~~~---------------------------~-d~~~~L~ei~RvLkPGG~lvi~~p~~~  321 (452)
                      ...... ...||+|+++.-.....                           . -...++..+.+.|++||++++..|..+
T Consensus        70 ~~~~~~-~~~fd~ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fi~~al~~lk~~G~~~~I~p~~~  148 (223)
T d2ih2a1          70 FLLWEP-GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATW  148 (223)
T ss_dssp             GGGCCC-SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGG
T ss_pred             hhcccc-ccccceecccCccccccccccccchhhhhhhhhhhhccccCCCcchHHHHHHHHHHHhcccCCceEEEEeeee
Confidence            555443 46899999863211100                           0 013467889999999999999998766


Q ss_pred             CCCh
Q 012961          322 AHDP  325 (452)
Q Consensus       322 ~~~~  325 (452)
                      ....
T Consensus       149 l~~~  152 (223)
T d2ih2a1         149 LVLE  152 (223)
T ss_dssp             GTCG
T ss_pred             ccCc
Confidence            5443


No 72 
>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}
Probab=97.89  E-value=8.4e-06  Score=72.27  Aligned_cols=131  Identities=13%  Similarity=0.067  Sum_probs=76.5

Q ss_pred             CceeecCCCCCCCcccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHH
Q 012961          176 GEKINFPGGGTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQ  252 (452)
Q Consensus       176 g~~~~F~g~g~~f~~~~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~  252 (452)
                      |....++.+. ...+..+...+.+.+++...   +    ...+|||++||+|.++...+.+   .|+.+|.+...+....
T Consensus        12 g~~l~~~~~~-~~RPt~~~vre~lfn~l~~~---~----~~~~vLDlfaGsG~~giealsrGa~~v~~VE~~~~a~~~~k   83 (183)
T d2fpoa1          12 GRKLPVPDSP-GLRPTTDRVRETLFNWLAPV---I----VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLI   83 (183)
T ss_dssp             TCEEECCCC-------CHHHHHHHHHHHHHH---H----TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHH
T ss_pred             CCEecCCCCC-CcCcCcHHHHHHHHhhhhcc---c----chhhhhhhhccccceeeeEEecCcceeEEEEEeechhhHHH
Confidence            3445555432 23344445555555555321   1    2348999999999999877753   5778887776665444


Q ss_pred             HHHHHHcCCCeEEEEecCCC-CCCCCCCceEEEecccccccc-ccHHHHHHHHHH--hcCCCcEEEEEe
Q 012961          253 IQFALERGIPSTLGVLGTKR-LPYPSRSFELAHCSRCRIDWL-QRDGILLLELDR--LLRPGGYFVYSS  317 (452)
Q Consensus       253 ~~~A~~rg~~~~~~~~d~~~-lp~~d~sFDlVv~s~~~l~~~-~d~~~~L~ei~R--vLkPGG~lvi~~  317 (452)
                      .+.......+..+...|+.. +......||+|++.-   +|. .....++..+.+  +|+++|.+++..
T Consensus        84 ~N~~~~~~~~~~ii~~d~~~~l~~~~~~fDlIf~DP---PY~~~~~~~~l~~l~~~~~L~~~~iIiiE~  149 (183)
T d2fpoa1          84 KNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDP---PFRRGLLEETINLLEDNGWLADEALIYVES  149 (183)
T ss_dssp             HHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECC---SSSTTTHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred             HHHhhccccceeeeeecccccccccccccCEEEEcC---ccccchHHHHHHHHHHCCCCCCCeEEEEEe
Confidence            33332223356677677443 334567899999753   222 223456666654  699999999864


No 73 
>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=97.88  E-value=1e-05  Score=74.34  Aligned_cols=110  Identities=12%  Similarity=0.128  Sum_probs=75.1

Q ss_pred             HHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhh-----CCCccccCChhhhhHHHHHHHHHcCC--CeE
Q 012961          192 ADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGI--PST  264 (452)
Q Consensus       192 ~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~-----~~v~~vdis~~dis~~~~~~A~~rg~--~~~  264 (452)
                      ..++...+.++..           +++|||||+++|+.+.++++     ..++++|..+.....+. +...+.|.  .+.
T Consensus        47 ~g~~L~~L~~~~~-----------~k~iLEiGT~~GyStl~la~al~~~g~v~tie~~~~~~~~A~-~~~~~~g~~~~i~  114 (227)
T d1susa1          47 EGQFLSMLLKLIN-----------AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGL-PVIKKAGVDHKID  114 (227)
T ss_dssp             HHHHHHHHHHHHT-----------CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHH-HHHHHTTCGGGEE
T ss_pred             HHHHHHHHHHhcC-----------CCcEEEecchhhhhHHHHHhhCCCCcEEEEEeccchhHHHHH-HHHHHhcccccee
Confidence            3456666666654           45899999999999999985     35777777776544433 33333443  377


Q ss_pred             EEEecCCCC-C------CCCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961          265 LGVLGTKRL-P------YPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       265 ~~~~d~~~l-p------~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                      ++.+++.+. +      ...++||+|+.-.    +.......++.+.++|+|||.+++-.
T Consensus       115 ~~~g~a~~~L~~l~~~~~~~~~fD~iFiDa----~k~~y~~~~e~~~~ll~~gGiii~DN  170 (227)
T d1susa1         115 FREGPALPVLDEMIKDEKNHGSYDFIFVDA----DKDNYLNYHKRLIDLVKVGGVIGYDN  170 (227)
T ss_dssp             EEESCHHHHHHHHHHCGGGTTCBSEEEECS----CSTTHHHHHHHHHHHBCTTCCEEEET
T ss_pred             eeehHHHHHHHHHHhccccCCceeEEEecc----chhhhHHHHHHHHhhcCCCcEEEEcc
Confidence            777775332 1      1246899999543    33445678899999999999999854


No 74 
>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}
Probab=97.87  E-value=3.8e-05  Score=72.24  Aligned_cols=118  Identities=13%  Similarity=0.122  Sum_probs=70.8

Q ss_pred             CCEEEEECCCCchHHHHHhh---CCCccccCChhhhhHHHHHHHHHcCCC--eEEEEecCCC-CCCCCCCceEEEecccc
Q 012961          216 IRNVLDVGCGVASFGAYLLS---HDIIAMSLAPNDVHENQIQFALERGIP--STLGVLGTKR-LPYPSRSFELAHCSRCR  289 (452)
Q Consensus       216 ~~~VLDIGCG~G~~~~~La~---~~v~~vdis~~dis~~~~~~A~~rg~~--~~~~~~d~~~-lp~~d~sFDlVv~s~~~  289 (452)
                      ..+|||+|||+|..+..++.   ..|+++|+++..+.-+. +.|+..+..  +.+...+... ++...+.||+|+|+---
T Consensus       111 ~~~vld~g~GsG~i~~~la~~~~~~v~a~Dis~~Al~~A~-~Na~~~~~~~~~~i~~~~~~~~~~~~~~~fDlIVsNPPY  189 (271)
T d1nv8a_         111 IKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIAR-KNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPPY  189 (271)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHH-HHHHHTTCTTSEEEEESSTTGGGGGGTTTCCEEEECCCC
T ss_pred             ccEEEEeeeeeehhhhhhhhcccceeeechhhhhHHHHHH-HHHHHcCCCceeEEeecccccccccccCcccEEEEcccc
Confidence            44899999999998888875   35777777776665554 334444443  4455555433 22233689999986211


Q ss_pred             cc----------ccc--------cHHHHH-HHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCC
Q 012961          290 ID----------WLQ--------RDGILL-LELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCW  343 (452)
Q Consensus       290 l~----------~~~--------d~~~~L-~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf  343 (452)
                      +.          |-+        |.-.++ +-+.+.|+|||.+++.....         .-+.+.+++++.||
T Consensus       190 I~~~~~l~~~~~~EP~~AL~gg~dGl~~~r~i~~~~L~~~G~l~~Eig~~---------Q~~~v~~l~~~~g~  253 (271)
T d1nv8a_         190 VKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGED---------QVEELKKIVSDTVF  253 (271)
T ss_dssp             BCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTT---------CHHHHTTTSTTCEE
T ss_pred             cCcccccceeeeeccccccccccchHHHHHHHHHHhcCCCCEEEEEECHH---------HHHHHHHHHHhCCE
Confidence            10          100        000122 22567899999999865321         12467777777777


No 75 
>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=97.87  E-value=6.7e-06  Score=77.80  Aligned_cols=102  Identities=15%  Similarity=0.114  Sum_probs=66.9

Q ss_pred             CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHc---------------CCCeEEEEecCCCCCCCCCC
Q 012961          215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER---------------GIPSTLGVLGTKRLPYPSRS  279 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~r---------------g~~~~~~~~d~~~lp~~d~s  279 (452)
                      ++++||-||+|.|..+..++.....  .+...++++..++.|++-               ..++.++..|+...--.+++
T Consensus        72 ~p~~vLiiG~G~G~~~~~~l~~~~~--~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~Da~~~l~~~~~  149 (276)
T d1mjfa_          72 KPKRVLVIGGGDGGTVREVLQHDVD--EVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRG  149 (276)
T ss_dssp             CCCEEEEEECTTSHHHHHHTTSCCS--EEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCC
T ss_pred             CCceEEEecCCchHHHHHHHHhCCc--eEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEChHHHHHhccCC
Confidence            5679999999999999988875322  222234555555666532               34578888886443223478


Q ss_pred             ceEEEecccccccccc----HHHHHHHHHHhcCCCcEEEEEeCC
Q 012961          280 FELAHCSRCRIDWLQR----DGILLLELDRLLRPGGYFVYSSPE  319 (452)
Q Consensus       280 FDlVv~s~~~l~~~~d----~~~~L~ei~RvLkPGG~lvi~~p~  319 (452)
                      ||+|++-. .-.....    -..+++.+.+.|+|||.+++....
T Consensus       150 yDvIi~D~-~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~~s  192 (276)
T d1mjfa_         150 FDVIIADS-TDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGS  192 (276)
T ss_dssp             EEEEEEEC-CCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             CCEEEEeC-CCCCCCcccccCHHHHHhhHhhcCCCceEEEecCC
Confidence            99999632 1111111    146899999999999999986533


No 76 
>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}
Probab=97.80  E-value=3.2e-05  Score=68.37  Aligned_cols=130  Identities=13%  Similarity=0.038  Sum_probs=80.8

Q ss_pred             ceeecCCCCCCCcccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHH
Q 012961          177 EKINFPGGGTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQI  253 (452)
Q Consensus       177 ~~~~F~g~g~~f~~~~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~  253 (452)
                      ....++.+ ....+..+..-+.+-+++...       -...+|||++||+|.++...+.+   .|+.+|.+...+.....
T Consensus        11 ~~l~~~~~-~~~RPt~~~vrealFn~l~~~-------~~~~~vLDlfaGsG~~g~ea~srGa~~v~~ve~~~~a~~~~~~   82 (182)
T d2fhpa1          11 RRLKALDG-DNTRPTTDKVKESIFNMIGPY-------FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKE   82 (182)
T ss_dssp             CBCCCCCC-CSSCCCCHHHHHHHHHHHCSC-------CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred             CEecCCCC-CCcCcCcHHHHHHHHHHHHHh-------cCCCEEEEcccccccccceeeecchhHHHHHHHHHHHHHHHHH
Confidence            34444433 234555666677777777532       23458999999999999987764   46677766655443332


Q ss_pred             HHHHHcCC--CeEEEEecCCCC----CCCCCCceEEEeccccccc-cccHHHHHHHHHH--hcCCCcEEEEEeC
Q 012961          254 QFALERGI--PSTLGVLGTKRL----PYPSRSFELAHCSRCRIDW-LQRDGILLLELDR--LLRPGGYFVYSSP  318 (452)
Q Consensus       254 ~~A~~rg~--~~~~~~~d~~~l----p~~d~sFDlVv~s~~~l~~-~~d~~~~L~ei~R--vLkPGG~lvi~~p  318 (452)
                      + +...+.  ++.+...|+...    .-....||+|++--   +| ..+....+..+..  +|+++|.+++...
T Consensus        83 N-~~~~~~~~~~~i~~~D~~~~l~~~~~~~~~fDlIflDP---PY~~~~~~~~l~~i~~~~~L~~~giIi~E~~  152 (182)
T d2fhpa1          83 N-IAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDP---PYAKQEIVSQLEKMLERQLLTNEAVIVCETD  152 (182)
T ss_dssp             H-HHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECC---CGGGCCHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred             H-hhhhhcccccccccccchhhhhhhcccCCCcceEEech---hhhhhHHHHHHHHHHHCCCCCCCEEEEEEcC
Confidence            2 222232  467788886432    12345799999653   23 2334556777654  6999999998653


No 77 
>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=97.57  E-value=0.00016  Score=68.46  Aligned_cols=121  Identities=13%  Similarity=0.102  Sum_probs=77.3

Q ss_pred             CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHc---------CCCeEEEEecCCCC--CCCCCC
Q 012961          215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER---------GIPSTLGVLGTKRL--PYPSRS  279 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~r---------g~~~~~~~~d~~~l--p~~d~s  279 (452)
                      ++++||=||-|.|..+..+++.    .++.+|+++..     ++.+++-         ..++.++..|....  ...+++
T Consensus        80 ~pk~VLiiGgG~G~~~r~~l~~~~~~~i~~VEiD~~V-----i~~~~~~f~~~~~~~~~~r~~i~~~Da~~~l~~~~~~~  154 (290)
T d1xj5a_          80 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMV-----VDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGS  154 (290)
T ss_dssp             CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHH-----HHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTC
T ss_pred             CCcceEEecCCchHHHHHHHhcccceeeEEecCCHHH-----HHHHHHhchhhhccccCCCcEEEEccHHHHHhhccccC
Confidence            5679999999999999999874    34556555544     4444332         46688888885432  234568


Q ss_pred             ceEEEecccccccccc----HHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEE
Q 012961          280 FELAHCSRCRIDWLQR----DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKI  345 (452)
Q Consensus       280 FDlVv~s~~~l~~~~d----~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~  345 (452)
                      ||+|+.-. .-.....    -..+++.+.+.|+|||.+++.....+. ..   ..+..+.+.+++....+
T Consensus       155 yDvIi~D~-~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~~s~~~-~~---~~~~~i~~~l~~vF~~~  219 (290)
T d1xj5a_         155 YDAVIVDS-SDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWL-HM---DIIEDIVSNCREIFKGS  219 (290)
T ss_dssp             EEEEEECC-CCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTT-CH---HHHHHHHHHHHHHCSSC
T ss_pred             ccEEEEcC-CCCCCcchhhCCHHHHHHHHHhcCCCcEEEEecCCcHH-HH---HHHHHHHhhhhhhcccc
Confidence            99999632 1111111    156999999999999999998755432 22   22344555555554433


No 78 
>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}
Probab=97.56  E-value=6.2e-05  Score=71.61  Aligned_cols=106  Identities=12%  Similarity=0.080  Sum_probs=68.3

Q ss_pred             CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHH----cCCCeEEEEecCCCC-CCCCCCceEEEe
Q 012961          215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALE----RGIPSTLGVLGTKRL-PYPSRSFELAHC  285 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~----rg~~~~~~~~d~~~l-p~~d~sFDlVv~  285 (452)
                      ++++||-||.|.|..+..+++.    .|+.+|+++..+..+..-+...    ...++.+...|+... .-.++.||+|++
T Consensus        89 ~pk~VLiiGgG~G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yDvIi~  168 (295)
T d1inla_          89 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII  168 (295)
T ss_dssp             SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred             CCceEEEecCCchHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEhhhHHHHHhcCCCCCCEEEE
Confidence            4679999999999999999874    3556666655443332111111    135688888885432 223468999996


Q ss_pred             cccccccc-c----cHHHHHHHHHHhcCCCcEEEEEeCCCC
Q 012961          286 SRCRIDWL-Q----RDGILLLELDRLLRPGGYFVYSSPEAY  321 (452)
Q Consensus       286 s~~~l~~~-~----d~~~~L~ei~RvLkPGG~lvi~~p~~~  321 (452)
                      -. .-... +    .-..+++.+.+.|+|||.+++.....+
T Consensus       169 D~-~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q~~sp~  208 (295)
T d1inla_         169 DS-TDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPF  208 (295)
T ss_dssp             EC-----------CCSHHHHHHHHHHEEEEEEEEEECCCTT
T ss_pred             cC-CCCCcCchhhhccHHHHHHHHhhcCCCcEEEEecCChh
Confidence            42 11111 1    125699999999999999998775544


No 79 
>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}
Probab=97.53  E-value=8.5e-05  Score=71.19  Aligned_cols=124  Identities=12%  Similarity=0.103  Sum_probs=76.8

Q ss_pred             CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHc----------CCCeEEEEecCCCC-CCCCCC
Q 012961          215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER----------GIPSTLGVLGTKRL-PYPSRS  279 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~r----------g~~~~~~~~d~~~l-p~~d~s  279 (452)
                      .+++||.||.|.|..+..++..    .|+.+++++.     .++.|++.          ..++.++..|+... .-.+++
T Consensus        77 ~pk~VLiiG~G~G~~~~~ll~~~~~~~v~~VEiD~~-----Vi~~a~~~f~~~~~~~~~d~rv~i~~~Da~~~l~~~~~~  151 (312)
T d1uira_          77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGE-----LVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEER  151 (312)
T ss_dssp             CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHH-----HHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCC
T ss_pred             CcceEEEeCCCchHHHHHHHhcCCcceEEEecCCHH-----HHHHHHhcCcccccCccCCCceEEEEchHHHHhhhcCCc
Confidence            5679999999999999988763    3455555544     44444432          34678888886443 223468


Q ss_pred             ceEEEeccccccccc-----c--HHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEE
Q 012961          280 FELAHCSRCRIDWLQ-----R--DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVS  347 (452)
Q Consensus       280 FDlVv~s~~~l~~~~-----d--~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~  347 (452)
                      ||+|++-. .-.+..     .  -..+++.+.+.|+|||.+++.....+....   .....+.+.+++....+..
T Consensus       152 yDvIi~D~-~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~~~s~~~~~~---~~~~~i~~tl~~~F~~V~~  222 (312)
T d1uira_         152 YDVVIIDL-TDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHH---RVHPVVHRTVREAFRYVRS  222 (312)
T ss_dssp             EEEEEEEC-CCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC------CHHHHHHHHHHTTCSEEEE
T ss_pred             ccEEEEeC-CCcccccchhhhhhhHHHHHHHHHhcCCCceEEEecCCcccchH---HHHHHHHHHHHHhCceEEE
Confidence            99999532 111111     1  156999999999999999986533322111   2234566667766444433


No 80 
>d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]}
Probab=97.53  E-value=0.0011  Score=63.81  Aligned_cols=161  Identities=17%  Similarity=0.206  Sum_probs=95.6

Q ss_pred             ccccceeecCceeecCCCCCCCcccH---HHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC--CCccc
Q 012961          167 SDQHWMVVNGEKINFPGGGTHFHDGA---DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAM  241 (452)
Q Consensus       167 ~~~~W~~~~g~~~~F~g~g~~f~~~~---~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~--~v~~v  241 (452)
                      +...|....|-.+.++ .++.|+...   +...+.+.+.+..        .+..+|||+-||+|.|+..|++.  .|+++
T Consensus       170 g~~~~~~~~g~~~~i~-p~sFfQ~N~~~~e~l~~~v~~~~~~--------~~~~~vlDLycG~G~fsl~La~~~~~V~gv  240 (358)
T d1uwva2         170 GEMPWYDSNGLRLTFS-PRDFIQVNAGVNQKMVARALEWLDV--------QPEDRVLDLFCGMGNFTLPLATQAASVVGV  240 (358)
T ss_dssp             CCCCEEEETTEEEECC-SSSCCCSBHHHHHHHHHHHHHHHTC--------CTTCEEEEESCTTTTTHHHHHTTSSEEEEE
T ss_pred             CCceEEecCCEEEEEC-CchhhccchhhhhHHHHHHHHhhcc--------CCCceEEEecccccccchhccccccEEEec
Confidence            3444555544444443 344555443   4445555555542        24458999999999999999973  78899


Q ss_pred             cCChhhhhHHHHHHHHHcCC-CeEEEEecCCCC-C---CCCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEE
Q 012961          242 SLAPNDVHENQIQFALERGI-PSTLGVLGTKRL-P---YPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYS  316 (452)
Q Consensus       242 dis~~dis~~~~~~A~~rg~-~~~~~~~d~~~l-p---~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~  316 (452)
                      |.++..+..+. +.|+..+. ++.+..++.+.. +   .....||+|+..--.-    -....+..+.+. +|.-.++++
T Consensus       241 E~~~~ai~~A~-~na~~n~i~n~~~~~~~~~~~~~~~~~~~~~~d~vilDPPR~----G~~~~~~~l~~~-~~~~ivYVS  314 (358)
T d1uwva2         241 EGVPALVEKGQ-QNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARA----GAAGVMQQIIKL-EPIRIVYVS  314 (358)
T ss_dssp             ESCHHHHHHHH-HHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECCCTT----CCHHHHHHHHHH-CCSEEEEEE
T ss_pred             cCcHHHHHHHH-HhHHhcccccceeeecchhhhhhhhhhhhccCceEEeCCCCc----cHHHHHHHHHHc-CCCEEEEEe
Confidence            88887776555 34444444 577887776543 2   2246799998532100    013356666653 677777776


Q ss_pred             eCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEEec
Q 012961          317 SPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKDQ  351 (452)
Q Consensus       317 ~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~~  351 (452)
                      -.+      ..  .-.++..+ .+.||++...+..
T Consensus       315 Cnp------~T--laRDl~~l-~~~gy~l~~i~~~  340 (358)
T d1uwva2         315 CNP------AT--LARDSEAL-LKAGYTIARLAML  340 (358)
T ss_dssp             SCH------HH--HHHHHHHH-HHTTCEEEEEEEE
T ss_pred             CCH------HH--HHHHHHHH-HHCCCeEeEEEEE
Confidence            532      11  12344443 4579998876643


No 81 
>d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus subtilis, Ermc' [TaxId: 1423]}
Probab=97.46  E-value=0.00023  Score=65.31  Aligned_cols=67  Identities=10%  Similarity=0.127  Sum_probs=47.9

Q ss_pred             CCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHc---CCCeEEEEecCCCCCCCCCCceEEEec
Q 012961          215 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALER---GIPSTLGVLGTKRLPYPSRSFELAHCS  286 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~r---g~~~~~~~~d~~~lp~~d~sFDlVv~s  286 (452)
                      +..+|||||||+|.++..|++.  .+++++++..     .++..+++   ..++.++.+|+..++++......|+++
T Consensus        21 ~~d~VlEIGpG~G~LT~~Ll~~~~~v~avE~D~~-----l~~~l~~~~~~~~n~~i~~~D~l~~~~~~~~~~~vv~N   92 (235)
T d1qama_          21 EHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHK-----LCKTTENKLVDHDNFQVLNKDILQFKFPKNQSYKIFGN   92 (235)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHH-----HHHHHHHHTTTCCSEEEECCCGGGCCCCSSCCCEEEEE
T ss_pred             CCCeEEEECCCchHHHHHHHhCcCceEEEeeccc-----hHHHHHHHhhcccchhhhhhhhhhccccccccceeeee
Confidence            4568999999999999999973  5677766554     34444443   346889999998888775544456543


No 82 
>d1yuba_ c.66.1.24 (A:) rRNA adenine dimethylase {Streptococcus pneumoniae, Ermam [TaxId: 1313]}
Probab=97.33  E-value=3.3e-05  Score=71.64  Aligned_cols=79  Identities=13%  Similarity=0.215  Sum_probs=56.2

Q ss_pred             HHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhh--CCCccccCChhhhhHHHHHHHHHc---CCCeEEEEec
Q 012961          195 YILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS--HDIIAMSLAPNDVHENQIQFALER---GIPSTLGVLG  269 (452)
Q Consensus       195 y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~--~~v~~vdis~~dis~~~~~~A~~r---g~~~~~~~~d  269 (452)
                      .++.+.+.+..        .+..+|||||||+|.++..|++  ..|++++++...+.     .++++   ..++.+..+|
T Consensus        17 ii~kIv~~~~~--------~~~d~VLEIGpG~G~LT~~L~~~~~~v~aIE~D~~l~~-----~l~~~~~~~~n~~ii~~D   83 (245)
T d1yuba_          17 VLNQIIKQLNL--------KETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFN-----LSSEKLKLNTRVTLIHQD   83 (245)
T ss_dssp             THHHHHHHCCC--------CSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSS-----SSSCTTTTCSEEEECCSC
T ss_pred             HHHHHHHhcCC--------CCCCeEEEECCCccHHHHHHHhhcCceeEeeecccchh-----hhhhhhhhccchhhhhhh
Confidence            34455555543        2445899999999999999987  36788888776543     23333   2457888899


Q ss_pred             CCCCCCCCCCceEEEec
Q 012961          270 TKRLPYPSRSFELAHCS  286 (452)
Q Consensus       270 ~~~lp~~d~sFDlVv~s  286 (452)
                      +.+++++...++.|+++
T Consensus        84 ~l~~~~~~~~~~~vv~N  100 (245)
T d1yuba_          84 ILQFQFPNKQRYKIVGN  100 (245)
T ss_dssp             CTTTTCCCSSEEEEEEE
T ss_pred             hhccccccceeeeEeee
Confidence            99888887777777754


No 83 
>d1xdza_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Bacillus subtilis [TaxId: 1423]}
Probab=97.33  E-value=0.00073  Score=61.99  Aligned_cols=123  Identities=11%  Similarity=0.106  Sum_probs=75.5

Q ss_pred             CCEEEEECCCCchHHHHHhh----CCCccccCChhhhhHHHHHHHHHcCCC-eEEEEecCCCCCCC---CCCceEEEecc
Q 012961          216 IRNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGIP-STLGVLGTKRLPYP---SRSFELAHCSR  287 (452)
Q Consensus       216 ~~~VLDIGCG~G~~~~~La~----~~v~~vdis~~dis~~~~~~A~~rg~~-~~~~~~d~~~lp~~---d~sFDlVv~s~  287 (452)
                      ..+|+|||+|.|.-+..|+=    ..++-+|-...-+. -..+..++-+.. +.+....++.+...   .++||+|+|-.
T Consensus        71 ~~~ilDiGSGaGfPGi~laI~~p~~~v~Lves~~KK~~-FL~~v~~~L~L~n~~i~~~R~E~~~~~~~~~~~~D~v~sRA  149 (239)
T d1xdza_          71 VNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRIT-FLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARA  149 (239)
T ss_dssp             CCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHH-HHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEEC
T ss_pred             CCeEEeecCCCchHHHHHHHhCCCccceeecchHHHHH-HHHHHHHHhCCCCcEEEeehhhhccccccccccceEEEEhh
Confidence            45899999999987777663    23444544332211 111223334554 55555555554321   25799998643


Q ss_pred             ccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEEe
Q 012961          288 CRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD  350 (452)
Q Consensus       288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~  350 (452)
                           +.....++.-+...+++||.+++.--..      .....++....+...|+++.....
T Consensus       150 -----va~l~~ll~~~~~~l~~~g~~i~~KG~~------~~~El~~a~~~~~~~~~~~~~v~~  201 (239)
T d1xdza_         150 -----VARLSVLSELCLPLVKKNGLFVALKAAS------AEEELNAGKKAITTLGGELENIHS  201 (239)
T ss_dssp             -----CSCHHHHHHHHGGGEEEEEEEEEEECC-------CHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred             -----hhCHHHHHHHHhhhcccCCEEEEECCCC------hHHHHHHHHHHHHHcCCEEEEEEE
Confidence                 2455779999999999999999854222      223345666778888998766543


No 84 
>d1ej0a_ c.66.1.2 (A:) RNA methyltransferase FtsJ {Escherichia coli [TaxId: 562]}
Probab=97.32  E-value=0.00031  Score=61.79  Aligned_cols=91  Identities=19%  Similarity=0.192  Sum_probs=59.6

Q ss_pred             CCCEEEEECCCCchHHHHHhh-----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC--------CCCCCce
Q 012961          215 NIRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--------YPSRSFE  281 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~-----~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp--------~~d~sFD  281 (452)
                      +..+||||||+.|.|+.++.+     ..++++|+.+..           .-..+.+..+|.....        .....||
T Consensus        22 ~~~~vlDLg~aPGgw~q~~~~~~~~~~~v~~vDl~~~~-----------~i~~~~~~~~d~~~~~~~~~~~~~~~~~~~D   90 (180)
T d1ej0a_          22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMD-----------PIVGVDFLQGDFRDELVMKALLERVGDSKVQ   90 (180)
T ss_dssp             TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCC-----------CCTTEEEEESCTTSHHHHHHHHHHHTTCCEE
T ss_pred             CCCeEEEEeccCCcceEEEEeeccccceEEEeeccccc-----------ccCCceEeecccccchhhhhhhhhccCccee
Confidence            445899999999999999886     246677766532           1234556666654321        2346799


Q ss_pred             EEEeccccccccc----cH-------HHHHHHHHHhcCCCcEEEEEe
Q 012961          282 LAHCSRCRIDWLQ----RD-------GILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       282 lVv~s~~~l~~~~----d~-------~~~L~ei~RvLkPGG~lvi~~  317 (452)
                      +|+|-. ......    |.       ...+.-+.++|++||.|++-.
T Consensus        91 lVlSD~-ap~~sg~~~~d~~~~~~L~~~~l~~a~~~Lk~gG~fV~K~  136 (180)
T d1ej0a_          91 VVMSDM-APNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKV  136 (180)
T ss_dssp             EEEECC-CCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEecc-cchhcccchhHHHHHHHHHHHHHHhhhhccCCCCcEEEEE
Confidence            999754 222211    11       236677789999999999865


No 85 
>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.30  E-value=0.00014  Score=68.80  Aligned_cols=121  Identities=16%  Similarity=0.178  Sum_probs=74.6

Q ss_pred             CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHc---------CCCeEEEEecCCCC-CCCCCCc
Q 012961          215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER---------GIPSTLGVLGTKRL-PYPSRSF  280 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~r---------g~~~~~~~~d~~~l-p~~d~sF  280 (452)
                      .+++||-||-|.|..+..+++.    .++.+|+.+     ..++.|++.         ..++.++..|+... .-..++|
T Consensus        78 ~pk~vLiiGgG~G~~~~~~l~~~~~~~v~~vEiD~-----~Vv~~a~~~~~~~~~~~~d~rv~i~~~Da~~~l~~~~~~y  152 (285)
T d2o07a1          78 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDE-----DVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAF  152 (285)
T ss_dssp             SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCH-----HHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCE
T ss_pred             CcCeEEEeCCCchHHHHHHHHcCCcceeeeccCCH-----HHHHHHHhhchhhccccCCCCceEEEccHHHHHhcCCCCC
Confidence            4578999999999999999874    344455544     444554432         35788888885432 2234689


Q ss_pred             eEEEecccccccccc----HHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEE
Q 012961          281 ELAHCSRCRIDWLQR----DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIV  346 (452)
Q Consensus       281 DlVv~s~~~l~~~~d----~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v  346 (452)
                      |+|++-. .-.....    -..+++.+.+.|+|||.+++.....+.. .   .....+.+.+++. |..+
T Consensus       153 DvIi~D~-~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~~s~~~~-~---~~~~~~~~tl~~~-F~~v  216 (285)
T d2o07a1         153 DVIITDS-SDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLH-L---DLIKEMRQFCQSL-FPVV  216 (285)
T ss_dssp             EEEEEEC-C-----------CHHHHHHHHHEEEEEEEEEEEECTTTC-H---HHHHHHHHHHHHH-CSEE
T ss_pred             CEEEEcC-CCCCCcccccccHHHHHHHHHhcCCCCeEEEeccchhhh-H---HHHHHHHHHHHhc-CCee
Confidence            9999642 1111111    1348999999999999999876443322 1   2234444445443 4444


No 86 
>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}
Probab=97.29  E-value=0.00016  Score=69.03  Aligned_cols=101  Identities=14%  Similarity=0.059  Sum_probs=65.9

Q ss_pred             CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHc---------CCCeEEEEecCCCC-CCCCCCc
Q 012961          215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER---------GIPSTLGVLGTKRL-PYPSRSF  280 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~r---------g~~~~~~~~d~~~l-p~~d~sF  280 (452)
                      .+++||-||-|.|..+..+++.    .|+.++++     +..++.|++-         ..++.++..|+... .-..++|
T Consensus       106 ~pk~VLIiGgG~G~~~rellk~~~v~~v~~VEID-----~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~~~l~~~~~~y  180 (312)
T d2b2ca1         106 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEID-----EMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEF  180 (312)
T ss_dssp             SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSC-----HHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCE
T ss_pred             CCCeEEEeCCCchHHHHHHHHcCCcceEEEEccc-----HHHHHHHHhhchhhccccCCCCeEEEEchHHHHHHhCCCCC
Confidence            5678999999999999999874    34445444     4455555543         24577887775432 2235789


Q ss_pred             eEEEeccccccccc----cHHHHHHHHHHhcCCCcEEEEEeCCCC
Q 012961          281 ELAHCSRCRIDWLQ----RDGILLLELDRLLRPGGYFVYSSPEAY  321 (452)
Q Consensus       281 DlVv~s~~~l~~~~----d~~~~L~ei~RvLkPGG~lvi~~p~~~  321 (452)
                      |+|++-. .-....    .-..+++.+.+.|+|||.++......+
T Consensus       181 DvII~D~-~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~~s~~  224 (312)
T d2b2ca1         181 DVIITDS-SDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVW  224 (312)
T ss_dssp             EEEEECC-C-------------HHHHHHHHEEEEEEEEEECCCTT
T ss_pred             CEEEEcC-CCCCCcchhhhhHHHHHHHHhhcCCCcEEEEecCChH
Confidence            9999643 111111    114589999999999999999875544


No 87 
>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}
Probab=97.27  E-value=0.0002  Score=67.32  Aligned_cols=125  Identities=12%  Similarity=0.077  Sum_probs=77.5

Q ss_pred             CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHH----cCCCeEEEEecCCCC-CCCCCCceEEEe
Q 012961          215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALE----RGIPSTLGVLGTKRL-PYPSRSFELAHC  285 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~----rg~~~~~~~~d~~~l-p~~d~sFDlVv~  285 (452)
                      ++++||-||-|.|..+..+++.    .|+.+++++.-+..+..-+...    ...++.++..|+... .-.+++||+|+.
T Consensus        75 ~p~~vLiiGgG~G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~D~~~~l~~~~~~yDvIi~  154 (274)
T d1iy9a_          75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV  154 (274)
T ss_dssp             SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred             CcceEEecCCCCcHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEechHHHHHhhcCCCCCEEEE
Confidence            4568999999999999999874    3555665554443332211110    134678888886442 233578999986


Q ss_pred             ccccccccc----cHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCE
Q 012961          286 SRCRIDWLQ----RDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWK  344 (452)
Q Consensus       286 s~~~l~~~~----d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~  344 (452)
                      -. .-....    --..+++.+.+.|+|||.++......+. .+   .....+.+.+++..-.
T Consensus       155 D~-~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q~~s~~~-~~---~~~~~i~~tl~~~F~~  212 (274)
T d1iy9a_         155 DS-TEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWF-TP---ELITNVQRDVKEIFPI  212 (274)
T ss_dssp             SC-SSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTT-CH---HHHHHHHHHHHTTCSE
T ss_pred             cC-CCCCCcchhhccHHHHHHHHhhcCCCceEEEecCCccc-cH---HHHHHHHHhhhhhcCc
Confidence            42 111111    1256999999999999999987654432 22   2344566666666443


No 88 
>d1jsxa_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Escherichia coli [TaxId: 562]}
Probab=97.25  E-value=0.00039  Score=62.52  Aligned_cols=94  Identities=16%  Similarity=0.054  Sum_probs=63.2

Q ss_pred             CEEEEECCCCchHHHHHhh----CCCccccCChhhhhHHHHHHHHHcCC-CeEEEEecCCCCCCCCCCceEEEecccccc
Q 012961          217 RNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPYPSRSFELAHCSRCRID  291 (452)
Q Consensus       217 ~~VLDIGCG~G~~~~~La~----~~v~~vdis~~dis~~~~~~A~~rg~-~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~  291 (452)
                      .+|||||+|.|.-+..|+-    ..++.+|-...-+.- ..+.+++-+. ++.+....++++.. +.+||+|+| +++  
T Consensus        67 ~~ilDiGsGaG~PGi~laI~~p~~~~~Lves~~KK~~F-L~~~~~~L~L~nv~v~~~R~E~~~~-~~~fD~V~s-RA~--  141 (207)
T d1jsxa_          67 ERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRF-LRQVQHELKLENIEPVQSRVEEFPS-EPPFDGVIS-RAF--  141 (207)
T ss_dssp             SEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHH-HHHHHHHTTCSSEEEEECCTTTSCC-CSCEEEEEC-SCS--
T ss_pred             CceeeeeccCCceeeehhhhcccceEEEEecchHHHHH-HHHHHHHcCCcceeeeccchhhhcc-ccccceehh-hhh--
Confidence            3799999999987777762    345555554433211 1233344465 57777777777653 468999985 432  


Q ss_pred             ccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961          292 WLQRDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       292 ~~~d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                        .....++.-+...+++||.+++.-
T Consensus       142 --~~~~~ll~~~~~~l~~~g~~~~~K  165 (207)
T d1jsxa_         142 --ASLNDMVSWCHHLPGEQGRFYALK  165 (207)
T ss_dssp             --SSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred             --cCHHHHHHHHHHhcCCCcEEEEEC
Confidence              345678999999999999999854


No 89 
>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=97.13  E-value=0.00061  Score=65.01  Aligned_cols=126  Identities=18%  Similarity=0.158  Sum_probs=76.2

Q ss_pred             CCCEEEEECCCCchHHHHHhh-----CCCccccCChhhhhHHHHHHHHHcCC-CeEEEEecCCCCCCCCCCceEEEe---
Q 012961          215 NIRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPYPSRSFELAHC---  285 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~-----~~v~~vdis~~dis~~~~~~A~~rg~-~~~~~~~d~~~lp~~d~sFDlVv~---  285 (452)
                      ++.+|||+.||.|.=+..+++     ..+++.|++..-+.... +.....+. ++.+...|...++..+..||.|++   
T Consensus       116 ~g~~vlD~CAapGgKt~~l~~~~~~~~~i~a~d~~~~r~~~l~-~~~~r~~~~~i~~~~~d~~~~~~~~~~fD~ILvDaP  194 (313)
T d1ixka_         116 PGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETR-LNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAP  194 (313)
T ss_dssp             TTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHH-HHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECC
T ss_pred             ccceeeecccchhhhhHhhhhhcccccceeeeccCHHHHHHHH-HHHHHHHhhccccccccccccccccccccEEEEccc
Confidence            445899999999986666654     23666776654443322 22233343 455555566666555678999987   


Q ss_pred             -cc-cccc------c--cc-c-------HHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEE
Q 012961          286 -SR-CRID------W--LQ-R-------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIV  346 (452)
Q Consensus       286 -s~-~~l~------~--~~-d-------~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v  346 (452)
                       +. .++.      |  .. +       ...+|....+.|||||+++.++=.......     -..+..++++.+++++
T Consensus       195 CSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~gG~lVYsTCSl~~eEN-----E~VV~~~L~~~~~~~~  268 (313)
T d1ixka_         195 CTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEEN-----EFVIQWALDNFDVELL  268 (313)
T ss_dssp             TTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGT-----HHHHHHHHHHSSEEEE
T ss_pred             cccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCCcEEEEeeccCChHhH-----HHHHHHHHhcCCCEEe
Confidence             11 1111      1  11 1       133888999999999999998754432222     2345667777777655


No 90 
>d2bm8a1 c.66.1.50 (A:2-233) Cephalosporin hydroxylase CmcI {Streptomyces clavuligerus [TaxId: 1901]}
Probab=96.84  E-value=0.00071  Score=61.80  Aligned_cols=95  Identities=15%  Similarity=0.140  Sum_probs=58.5

Q ss_pred             CCEEEEECCCCchHHHHHhh--------CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC----CCCCCceEE
Q 012961          216 IRNVLDVGCGVASFGAYLLS--------HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP----YPSRSFELA  283 (452)
Q Consensus       216 ~~~VLDIGCG~G~~~~~La~--------~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp----~~d~sFDlV  283 (452)
                      +.+|||||++.|..+..++.        ..++++|+......     .+.....++.+..+|.....    +....+|+|
T Consensus        81 Pk~ILEIGv~~GgS~~~~a~~l~~~~~~~kI~giDId~~~~~-----~~~~~~~~I~~i~gDs~~~~~~~~l~~~~~dlI  155 (232)
T d2bm8a1          81 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQ-----IPASDMENITLHQGDCSDLTTFEHLREMAHPLI  155 (232)
T ss_dssp             CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCC-----CCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEE
T ss_pred             CCEEEEECCCCchHHHHHHHHHHhcCCCceEEecCcChhhhh-----hhhccccceeeeecccccHHHHHHHHhcCCCEE
Confidence            45899999999976665542        35778877543221     12223456888888864432    234568888


Q ss_pred             EeccccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961          284 HCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP  318 (452)
Q Consensus       284 v~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p  318 (452)
                      +.-. . |.....-.-+ +...+|++||++++.+.
T Consensus       156 fID~-~-H~~~~v~~~~-~~~~lLk~GG~iIveD~  187 (232)
T d2bm8a1         156 FIDN-A-HANTFNIMKW-AVDHLLEEGDYFIIEDM  187 (232)
T ss_dssp             EEES-S-CSSHHHHHHH-HHHHTCCTTCEEEECSC
T ss_pred             EEcC-C-cchHHHHHHH-HHhcccCcCCEEEEEcC
Confidence            7532 2 2222211223 46689999999999653


No 91 
>d2okca1 c.66.1.45 (A:9-433) Type I restriction enzyme StySJI M protein {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=96.83  E-value=0.0013  Score=65.20  Aligned_cols=116  Identities=17%  Similarity=0.177  Sum_probs=72.7

Q ss_pred             HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhh-----------------CCCccccCChhhhhHHHHHHH
Q 012961          194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS-----------------HDIIAMSLAPNDVHENQIQFA  256 (452)
Q Consensus       194 ~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~-----------------~~v~~vdis~~dis~~~~~~A  256 (452)
                      ...+.+.+++..        ....+|||-.||+|.|...+.+                 ..+.|+|+.+....-+.....
T Consensus       149 ~Iv~~mv~ll~~--------~~~~~IlDPacGsG~fL~~a~~~~~~~~~~~~~~~~~~~~~l~g~E~~~~~~~la~~n~~  220 (425)
T d2okca1         149 PLIQAMVDCINP--------QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY  220 (425)
T ss_dssp             HHHHHHHHHHCC--------CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred             hhhHhhheeccC--------cccceeeccccccCccHHHHHHHHHhhccchhhhhhhhhhhhhhhhccHHHHHHHHhhhh
Confidence            455666666652        2345899999999999877654                 134566666655544443333


Q ss_pred             HHcCC---CeEEEEecCCCCCCCCCCceEEEecccccccc----------------c-cHHHHHHHHHHhcCCCcEEEEE
Q 012961          257 LERGI---PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL----------------Q-RDGILLLELDRLLRPGGYFVYS  316 (452)
Q Consensus       257 ~~rg~---~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~----------------~-d~~~~L~ei~RvLkPGG~lvi~  316 (452)
                      .. +.   ...+...|.... .+...||+|+++-- +...                . ....++..+.+.|++||+++++
T Consensus       221 l~-g~~~~~~~i~~~d~l~~-~~~~~fD~Ii~NPP-fg~~~~~~~~~~~~~~~~~~~~~~~~Fi~~~~~~Lk~~G~~~iI  297 (425)
T d2okca1         221 LH-GIGTDRSPIVCEDSLEK-EPSTLVDVILANPP-FGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVV  297 (425)
T ss_dssp             HT-TCCSSCCSEEECCTTTS-CCSSCEEEEEECCC-SSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hc-CCccccceeecCchhhh-hcccccceEEecCC-CCCCccccchhhhhhcccccccHHHHHHHHHHHhcCCCCeEEEE
Confidence            32 22   234555665433 23468999998531 1100                0 1134899999999999999999


Q ss_pred             eCCC
Q 012961          317 SPEA  320 (452)
Q Consensus       317 ~p~~  320 (452)
                      .|..
T Consensus       298 ~p~~  301 (425)
T d2okca1         298 LPDN  301 (425)
T ss_dssp             EEHH
T ss_pred             echH
Confidence            8864


No 92 
>d2ifta1 c.66.1.46 (A:11-193) Putative methylase HI0767 {Haemophilus influenzae [TaxId: 727]}
Probab=96.75  E-value=0.0011  Score=58.01  Aligned_cols=98  Identities=13%  Similarity=0.106  Sum_probs=59.6

Q ss_pred             CEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCC---CeEEEEecC---CCCCCCCCCceEEEecc
Q 012961          217 RNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI---PSTLGVLGT---KRLPYPSRSFELAHCSR  287 (452)
Q Consensus       217 ~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~---~~~~~~~d~---~~lp~~d~sFDlVv~s~  287 (452)
                      .+|||+-||+|.++...+.+   .++.+|.+...+.... +.++..+.   ...+...|.   .........||+|++--
T Consensus        45 ~~vLDlFaGsG~~glEalSRGA~~v~fVE~~~~a~~~ik-~Ni~~l~~~~~~~~~~~~d~~~~l~~~~~~~~fDlIFlDP  123 (183)
T d2ifta1          45 SECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLK-KNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDP  123 (183)
T ss_dssp             CEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHH-HHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECC
T ss_pred             ceEeecccCccceeeeeeeecceeeEEeecccchhhhHh-hHHhhhcccccccccccccccccccccccCCcccEEEech
Confidence            48999999999999999874   4666666655432222 22222232   234444442   22233345799998643


Q ss_pred             ccccccc-cHHHHHHHHHH--hcCCCcEEEEEeC
Q 012961          288 CRIDWLQ-RDGILLLELDR--LLRPGGYFVYSSP  318 (452)
Q Consensus       288 ~~l~~~~-d~~~~L~ei~R--vLkPGG~lvi~~p  318 (452)
                         +|.. .....+..+..  +|+++|.+++..+
T Consensus       124 ---PY~~~~~~~~l~~l~~~~~L~~~~liiiE~~  154 (183)
T d2ifta1         124 ---PFHFNLAEQAISLLCENNWLKPNALIYVETE  154 (183)
T ss_dssp             ---CSSSCHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred             ---hHhhhhHHHHHHHHHHhCCcCCCcEEEEEec
Confidence               2322 23456666654  7999999999654


No 93 
>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=96.72  E-value=0.0034  Score=58.74  Aligned_cols=125  Identities=15%  Similarity=0.146  Sum_probs=74.9

Q ss_pred             CCCEEEEECCCCchHHHHHhh----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC--CCCCCceEEEe---
Q 012961          215 NIRNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--YPSRSFELAHC---  285 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~----~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp--~~d~sFDlVv~---  285 (452)
                      ++.+|||+.+|.|.=+..|++    ..|+++|++..-+... .+..+..|.++...+.+.....  ...+.||.|++   
T Consensus       102 ~g~~vLD~CAaPGgKt~~la~l~~~~~i~a~d~~~~R~~~l-~~~~~r~g~~~~~~~~~~~~~~~~~~~~~fd~IL~DaP  180 (284)
T d1sqga2         102 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRV-YDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAP  180 (284)
T ss_dssp             TTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHH-HHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEECC
T ss_pred             ccceeEeccCccccchhhhhhhhhhhhhhhhhcchhhhhhH-hhhhhcccccceeeeccccccchhcccccccEEEEecc
Confidence            456899999999987777764    2467778777655333 3444555666555544432221  23467999997   


Q ss_pred             -cc-ccccccc----------------cHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHh-CCCEE
Q 012961          286 -SR-CRIDWLQ----------------RDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKS-MCWKI  345 (452)
Q Consensus       286 -s~-~~l~~~~----------------d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~-~Gf~~  345 (452)
                       +. .++...+                -...+|..+.+.|||||+++.++=....  .++   -+.++.++++ .+|++
T Consensus       181 CSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvYsTCS~~~--~EN---E~vv~~~l~~~~~~~~  254 (284)
T d1sqga2         181 CSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLP--EEN---SLQIKAFLQRTADAEL  254 (284)
T ss_dssp             CCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCG--GGT---HHHHHHHHHHCTTCEE
T ss_pred             ccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEEeeecCch--hhC---HHHHHHHHHhCCCcEE
Confidence             11 1111111                1133888999999999999998754332  111   2345556665 35544


No 94 
>d2p41a1 c.66.1.25 (A:8-264) An RNA cap (nucleoside-2'-O-)-methyltransferase domain of RNA polymerase NS5 {Dengue virus 2 [TaxId: 11060]}
Probab=96.61  E-value=0.005  Score=56.32  Aligned_cols=119  Identities=17%  Similarity=0.184  Sum_probs=64.0

Q ss_pred             CEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCCC-eEEEEe-cCCCCCCCCCCceEEEeccccc
Q 012961          217 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIP-STLGVL-GTKRLPYPSRSFELAHCSRCRI  290 (452)
Q Consensus       217 ~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~~-~~~~~~-d~~~lp~~d~sFDlVv~s~~~l  290 (452)
                      .+|+|+|||.|.++.+++..    .+.+.++- .+.++.-+. ....+-+ +.+... +...  .+.+..|+|+|-.+ -
T Consensus        68 ~~vvDlG~~pGgws~~~a~~~~v~~V~g~~iG-~d~~e~P~~-~~~~~~ni~~~~~~~dv~~--l~~~~~D~vlcDm~-e  142 (257)
T d2p41a1          68 GKVVDLGCGRGGWSYYCGGLKNVREVKGLTKG-GPGHEEPIP-MSTYGWNLVRLQSGVDVFF--IPPERCDTLLCDIG-E  142 (257)
T ss_dssp             EEEEEETCTTSHHHHHHHTSTTEEEEEEECCC-STTSCCCCC-CCSTTGGGEEEECSCCTTT--SCCCCCSEEEECCC-C
T ss_pred             CeEEEecCCCChHHHHHHhhcCCCceeEEEec-CccccCCcc-ccccccccccchhhhhHHh--cCCCcCCEEEeeCC-C
Confidence            37999999999999999864    23344332 122110000 0000111 122111 1222  34578999998652 2


Q ss_pred             cccccH-------HHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEE
Q 012961          291 DWLQRD-------GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIV  346 (452)
Q Consensus       291 ~~~~d~-------~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v  346 (452)
                      . ..++       -.+|+-+.+.|+|||.|++-....|  .+   +..+.++.+-...|=..+
T Consensus       143 s-s~~~~vd~~Rtl~vLela~~wLk~gg~FvvKVl~py--~~---~v~e~le~lq~~fgg~lV  199 (257)
T d2p41a1         143 S-SPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNPY--MS---SVIEKMEALQRKHGGALV  199 (257)
T ss_dssp             C-CSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCCC--SH---HHHHHHHHHHHHHCCEEE
T ss_pred             C-CCCchhhhhhHHHHHHHHHHHcccCCEEEEEECCCC--Ch---HHHHHHHHHHHHhCCeeE
Confidence            1 2211       2367777899999999998766554  22   234455555555544443


No 95 
>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}
Probab=96.33  E-value=0.0052  Score=53.73  Aligned_cols=119  Identities=16%  Similarity=0.112  Sum_probs=76.0

Q ss_pred             CCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHc-CCCeEEEEecCCCCC-----CCCCCceEEEec
Q 012961          215 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALER-GIPSTLGVLGTKRLP-----YPSRSFELAHCS  286 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~r-g~~~~~~~~d~~~lp-----~~d~sFDlVv~s  286 (452)
                      ++..++|..+|.|..+..+++.  .|+++|..+     .++..|++. ..++.+......++.     +..+.+|.|+.-
T Consensus        18 ~g~~~vD~T~G~GGhs~~iL~~~~~viaiD~D~-----~ai~~a~~~~~~~~~~~~~~f~~~~~~l~~~~~~~vdgIl~D   92 (182)
T d1wg8a2          18 PGGVYVDATLGGAGHARGILERGGRVIGLDQDP-----EAVARAKGLHLPGLTVVQGNFRHLKRHLAALGVERVDGILAD   92 (182)
T ss_dssp             TTCEEEETTCTTSHHHHHHHHTTCEEEEEESCH-----HHHHHHHHTCCTTEEEEESCGGGHHHHHHHTTCSCEEEEEEE
T ss_pred             CCCEEEEeCCCCcHHHHHHhcccCcEEEEhhhh-----hHHHHHhhccccceeEeehHHHHHHHHHHHcCCCccCEEEEE
Confidence            4458999999999999999875  456665544     445566554 334666666654432     334679999874


Q ss_pred             cccccc-cc-------cHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEE
Q 012961          287 RCRIDW-LQ-------RDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIV  346 (452)
Q Consensus       287 ~~~l~~-~~-------d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v  346 (452)
                      ..+-.+ +.       .....|.....+|++||.+++.....    .++    ..+...+++.+++.+
T Consensus        93 LGvSs~qld~~~re~~~~~~~L~~~~~~lk~gg~~~ii~fhs----~Ed----~ivk~~~~e~~~k~i  152 (182)
T d1wg8a2          93 LGVSSFHLDDPSDELNALKEFLEQAAEVLAPGGRLVVIAFHS----LED----RVVKRFLRESGLKVL  152 (182)
T ss_dssp             CSCCHHHHHCGGTHHHHHHHHHHHHHHHEEEEEEEEEEECSH----HHH----HHHHHHHHHHCSEES
T ss_pred             ccCCHHHhhcchHHHHHHHHHHHHHHhhhCCCCeEEEEeccc----chh----HHHHHHHhhccceec
Confidence            422222 11       12347888899999999999876321    111    245666777666554


No 96 
>d1zq9a1 c.66.1.24 (A:36-313) Probable dimethyladenosine transferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.87  E-value=0.021  Score=53.10  Aligned_cols=83  Identities=19%  Similarity=0.186  Sum_probs=52.1

Q ss_pred             HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhh--CCCccccCChhhhhHHHHHHHHHc-CCCeEEEEecC
Q 012961          194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS--HDIIAMSLAPNDVHENQIQFALER-GIPSTLGVLGT  270 (452)
Q Consensus       194 ~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~--~~v~~vdis~~dis~~~~~~A~~r-g~~~~~~~~d~  270 (452)
                      ..++.+.+.+..        .+..+|||||+|.|.++..|++  ..+++++++...+......+.... ..++.++.+|+
T Consensus         8 ~i~~kIv~~~~~--------~~~d~VlEIGPG~G~LT~~Ll~~~~~v~aiE~D~~l~~~L~~~~~~~~~~~~~~~i~~D~   79 (278)
T d1zq9a1           8 LIINSIIDKAAL--------RPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDV   79 (278)
T ss_dssp             HHHHHHHHHTCC--------CTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCT
T ss_pred             HHHHHHHHHhCC--------CCCCEEEEECCCchHHHHHHHhcCCcEEEEEEccchhHHHHHHHhhhccccchhhhHHHH
Confidence            345555555542        2345899999999999999987  367777776654433221111110 23578888888


Q ss_pred             CCCCCCCCCceEEEec
Q 012961          271 KRLPYPSRSFELAHCS  286 (452)
Q Consensus       271 ~~lp~~d~sFDlVv~s  286 (452)
                      ...+++  .++.|+++
T Consensus        80 l~~~~~--~~~~vV~N   93 (278)
T d1zq9a1          80 LKTDLP--FFDTCVAN   93 (278)
T ss_dssp             TTSCCC--CCSEEEEE
T ss_pred             hhhhhh--hhhhhhcc
Confidence            777655  35667754


No 97 
>d2ar0a1 c.66.1.45 (A:6-529) M.EcoKI {Escherichia coli [TaxId: 562]}
Probab=95.63  E-value=0.0088  Score=60.56  Aligned_cols=118  Identities=16%  Similarity=0.124  Sum_probs=66.1

Q ss_pred             HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC----------------------CCccccCChhhhhHH
Q 012961          194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH----------------------DIIAMSLAPNDVHEN  251 (452)
Q Consensus       194 ~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~----------------------~v~~vdis~~dis~~  251 (452)
                      ..++.+.+++..        ....+|+|-.||+|.|.....+.                      .+.|+|+.+....-+
T Consensus       151 ~Iv~~mv~ll~~--------~~~~~i~DPacGsG~fL~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~G~E~~~~~~~la  222 (524)
T d2ar0a1         151 PLIKTIIHLLKP--------QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLA  222 (524)
T ss_dssp             HHHHHHHHHHCC--------CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHH
T ss_pred             chhHhhhhcccC--------ccchhhcchhhhcchhhHHHHHHHHHhcCcccccchhHHHHHHHhhhhhhccCHHHHHHH
Confidence            345666666652        23457999999999998765431                      234555544433333


Q ss_pred             HHHHHHHcCCCe------EEEEecCCCCC-CCCCCceEEEecccccc--c-----------ccc-HHHHHHHHHHhcCCC
Q 012961          252 QIQFALERGIPS------TLGVLGTKRLP-YPSRSFELAHCSRCRID--W-----------LQR-DGILLLELDRLLRPG  310 (452)
Q Consensus       252 ~~~~A~~rg~~~------~~~~~d~~~lp-~~d~sFDlVv~s~~~l~--~-----------~~d-~~~~L~ei~RvLkPG  310 (452)
                      ...... .+...      .+...+....+ .....||+|+++-- +.  +           ..+ .-.++..+.+.|++|
T Consensus       223 ~~nl~l-~~~~~~i~~~~~~~~~~~l~~d~~~~~kfD~Ii~NPP-fg~~~~~~~~~~~~~~~~~~~~~Fi~~~l~~Lk~g  300 (524)
T d2ar0a1         223 LMNCLL-HDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPP-FGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPG  300 (524)
T ss_dssp             HHHHHT-TTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCC-CTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEE
T ss_pred             HHHHHh-hcccccccccchhhhhhhhhhcccccccceeEEecCC-ccccccccchhhhccccccccHHHHHHHHHhcccc
Confidence            222221 22221      12222221111 22357999998531 10  0           011 134899999999999


Q ss_pred             cEEEEEeCCCC
Q 012961          311 GYFVYSSPEAY  321 (452)
Q Consensus       311 G~lvi~~p~~~  321 (452)
                      |+++++.|...
T Consensus       301 Gr~aiIlP~~~  311 (524)
T d2ar0a1         301 GRAAVVVPDNV  311 (524)
T ss_dssp             EEEEEEEEHHH
T ss_pred             CcEEEEEehHH
Confidence            99999998653


No 98 
>d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein KsgA {Escherichia coli [TaxId: 562]}
Probab=95.61  E-value=0.0065  Score=55.85  Aligned_cols=69  Identities=10%  Similarity=0.114  Sum_probs=46.8

Q ss_pred             HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHc---CCCeEEEEe
Q 012961          194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALER---GIPSTLGVL  268 (452)
Q Consensus       194 ~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~r---g~~~~~~~~  268 (452)
                      ..++.+.+.+..        .+...|||||||.|.++..|++.  .+++++++.     ..++..+++   ..++.++.+
T Consensus         8 ~~~~~Iv~~~~~--------~~~d~vlEIGpG~G~LT~~Ll~~~~~v~aiEiD~-----~l~~~L~~~~~~~~~~~ii~~   74 (252)
T d1qyra_           8 FVIDSIVSAINP--------QKGQAMVEIGPGLAALTEPVGERLDQLTVIELDR-----DLAARLQTHPFLGPKLTIYQQ   74 (252)
T ss_dssp             HHHHHHHHHHCC--------CTTCCEEEECCTTTTTHHHHHTTCSCEEEECCCH-----HHHHHHHTCTTTGGGEEEECS
T ss_pred             HHHHHHHHhcCC--------CCCCEEEEECCCchHHHHHHHccCCceEEEEecc-----chhHHHHHHhhhccchhHHhh
Confidence            455566666653        23457999999999999999974  566666654     444444443   245788888


Q ss_pred             cCCCCCC
Q 012961          269 GTKRLPY  275 (452)
Q Consensus       269 d~~~lp~  275 (452)
                      |+..+++
T Consensus        75 D~l~~~~   81 (252)
T d1qyra_          75 DAMTFNF   81 (252)
T ss_dssp             CGGGCCH
T ss_pred             hhhhhcc
Confidence            8877654


No 99 
>d2b9ea1 c.66.1.38 (A:133-425) NOL1R {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.45  E-value=0.033  Score=51.91  Aligned_cols=120  Identities=13%  Similarity=0.029  Sum_probs=66.9

Q ss_pred             CCCEEEEECCCCchHHHHHhh-----CCCccccCChhhhhHHHHHHHHHcCCC-eEEEEecCCCCCCCC---CCceEEEe
Q 012961          215 NIRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGIP-STLGVLGTKRLPYPS---RSFELAHC  285 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~-----~~v~~vdis~~dis~~~~~~A~~rg~~-~~~~~~d~~~lp~~d---~sFDlVv~  285 (452)
                      ++.+|||+.||.|.=+.+|++     ..|+++|++..-+... .+.+...|.. +.+...|...+...+   +.||.|++
T Consensus        94 ~g~~vLD~cAapGgKt~~la~l~~~~~~i~a~d~~~~R~~~l-~~~l~r~g~~~~~~~~~d~~~~~~~~~~~~~fD~VL~  172 (293)
T d2b9ea1          94 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASM-ATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILL  172 (293)
T ss_dssp             TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEEE
T ss_pred             ccceEEecccchhhHHHHHHHHhcCCceEeeecCCHHHHHHH-HHHHHhcCccceeeeehhhhhhcccccccceeeEEee
Confidence            445899999999997777764     2466777765544332 2333444544 566666766554222   56999986


Q ss_pred             c----c-cccc------c--ccc----------HHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhC
Q 012961          286 S----R-CRID------W--LQR----------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSM  341 (452)
Q Consensus       286 s----~-~~l~------~--~~d----------~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~  341 (452)
                      -    . .++.      |  ..+          ...++..+. .|+|||.++.++=.....  +   .-+.+..++++.
T Consensus       173 DaPCSg~G~~~r~p~~~~~~~~~~~~~~~l~~~Q~~il~~a~-~l~~gG~lvYsTCSl~~~--E---Ne~vV~~~L~~~  245 (293)
T d2b9ea1         173 DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHAL-TFPSLQRLVYSTCSLCQE--E---NEDVVRDALQQN  245 (293)
T ss_dssp             CCCCCC------------------CCHHHHHHHHHHHHHHHT-TCTTCCEEEEEESCCCGG--G---THHHHHHHHTTS
T ss_pred             cCcccchhhhcccchhhccCCcchhhHHHHhhhhHHhHHHhh-hcccccEEEEeeccCChh--H---hHHHHHHHHHhC
Confidence            2    1 0110      1  000          012444444 479999999887543311  1   123455666653


No 100
>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=94.80  E-value=0.012  Score=57.18  Aligned_cols=97  Identities=11%  Similarity=0.008  Sum_probs=59.7

Q ss_pred             CCEEEEECCCCchHHHHHh-hC---CCccccCChhhhhHHHHHHHHHcCCC----------------eEEEEecCCCCCC
Q 012961          216 IRNVLDVGCGVASFGAYLL-SH---DIIAMSLAPNDVHENQIQFALERGIP----------------STLGVLGTKRLPY  275 (452)
Q Consensus       216 ~~~VLDIGCG~G~~~~~La-~~---~v~~vdis~~dis~~~~~~A~~rg~~----------------~~~~~~d~~~lp~  275 (452)
                      +.+|||..||+|..+...+ +.   .|+..|+++..+.....+.. ..+..                +.+...|+..+..
T Consensus        46 ~~~vLD~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~-lN~~~~~~~~~~~~~~~~~~~~~~~~~Da~~~~~  124 (375)
T d2dula1          46 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVM-LNFDGELRESKGRAILKGEKTIVINHDDANRLMA  124 (375)
T ss_dssp             CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHH-HHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred             CCEEEEcCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHH-hcCccccccccccccccccceeEeehhhhhhhhH
Confidence            3489999999999999654 33   45566666655433332222 22221                2233333322211


Q ss_pred             -CCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961          276 -PSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP  318 (452)
Q Consensus       276 -~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p  318 (452)
                       ....||+|..--     ...+..+|..+.+.++.||.|.++..
T Consensus       125 ~~~~~fDvIDiDP-----fGs~~pfldsAi~a~~~~Gll~vTaT  163 (375)
T d2dula1         125 ERHRYFHFIDLDP-----FGSPMEFLDTALRSAKRRGILGVTAT  163 (375)
T ss_dssp             HSTTCEEEEEECC-----SSCCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             hhcCcCCcccCCC-----CCCcHHHHHHHHHHhccCCEEEEEec
Confidence             235699997432     23446699999999999999999875


No 101
>d1m6ex_ c.66.1.35 (X:) Salicylic acid carboxyl methyltransferase (SAMT) {Clarkia breweri [TaxId: 36903]}
Probab=94.80  E-value=0.042  Score=52.75  Aligned_cols=44  Identities=23%  Similarity=0.468  Sum_probs=34.5

Q ss_pred             CCCCCCceEEEeccccccccc---------------------------------cHHHHHHHHHHhcCCCcEEEEEeC
Q 012961          274 PYPSRSFELAHCSRCRIDWLQ---------------------------------RDGILLLELDRLLRPGGYFVYSSP  318 (452)
Q Consensus       274 p~~d~sFDlVv~s~~~l~~~~---------------------------------d~~~~L~ei~RvLkPGG~lvi~~p  318 (452)
                      -||+++.|+++|+. ++||+.                                 |...+|+.=.+-|+|||+++++..
T Consensus       134 LfP~~Slh~~~Ss~-alHWLS~vP~~l~~n~~~i~~~~~~~~~v~~ay~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~  210 (359)
T d1m6ex_         134 LFPRNTLHFIHSSY-SLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL  210 (359)
T ss_dssp             CSCTTCBSCEEEES-CTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred             cCCCCceEEeeehh-hhhhhhcCCccccCCCCcEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEEEe
Confidence            47899999999988 699963                                 123377777788999999998763


No 102
>d1eg2a_ c.66.1.11 (A:) m.RsrI N6 adenosine-specific DNA methyltransferase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=94.14  E-value=0.042  Score=49.59  Aligned_cols=91  Identities=18%  Similarity=0.304  Sum_probs=57.6

Q ss_pred             EEEEecCCCC--CCCCCCceEEEeccc----------cccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHH
Q 012961          264 TLGVLGTKRL--PYPSRSFELAHCSRC----------RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIW  331 (452)
Q Consensus       264 ~~~~~d~~~l--p~~d~sFDlVv~s~~----------~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~  331 (452)
                      .+.++|..++  .++++++|+|+++--          ...|.......+.++.|+|+|||.+++.....+.........+
T Consensus         6 ~~~~~D~le~l~~l~d~SIDliitDPPYn~~~~~~~~~~~y~~~~~~~~~e~~rvLk~~G~~~~~~~~~~~~~~~~~~~~   85 (279)
T d1eg2a_           6 VYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQYQGEAGSGDLI   85 (279)
T ss_dssp             EEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSCCCCCTTBCCHH
T ss_pred             eEEechHHHHHhhCcCCCccEEEECCCCCCCcccccCHHHHHHHHHHHHHHHHHHhCCCccEEEecCccccccccccchh
Confidence            3556674332  366899999998631          0112233356889999999999999987654443322222345


Q ss_pred             HHHHHHHHhCCCEEEEEEeceeEeecc
Q 012961          332 NAMYDLLKSMCWKIVSKKDQTVIWAKP  358 (452)
Q Consensus       332 ~~l~~ll~~~Gf~~v~~~~~~~iw~kp  358 (452)
                      ..+..+.+..||.....    .+|.++
T Consensus        86 ~~~~~~~~~~~~~~~~~----i~~~k~  108 (279)
T d1eg2a_          86 SIISHMRQNSKMLLANL----IIWNYP  108 (279)
T ss_dssp             HHHHHHHHHCCCEEEEE----EEEECS
T ss_pred             hHHHHHHhccCceeeee----eeeccc
Confidence            56777888999986532    355554


No 103
>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}
Probab=92.96  E-value=0.092  Score=43.99  Aligned_cols=95  Identities=14%  Similarity=0.035  Sum_probs=59.4

Q ss_pred             CCCEEEEECCC-CchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC---------CCCCCceEEE
Q 012961          215 NIRNVLDVGCG-VASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP---------YPSRSFELAH  284 (452)
Q Consensus       215 ~~~~VLDIGCG-~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp---------~~d~sFDlVv  284 (452)
                      +..+||=+||| .|.++..++..  .+..+...+.++..++.|++.+....+..-......         ...+.+|+|+
T Consensus        26 ~g~~vlV~G~G~vG~~~~~~ak~--~Ga~vi~v~~~~~r~~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vi  103 (170)
T d1e3ja2          26 LGTTVLVIGAGPIGLVSVLAAKA--YGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTI  103 (170)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEE
T ss_pred             CCCEEEEEcccccchhhHhhHhh--hcccccccchHHHHHHHHHHcCCcEEEeccccccccchhhhhhhcccccCCceee
Confidence            34589999998 46666666653  233444456677778889888765544322111110         0124689887


Q ss_pred             eccccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961          285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP  318 (452)
Q Consensus       285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p  318 (452)
                      -.-.       ....+....++|+++|.+++...
T Consensus       104 d~~g-------~~~~~~~a~~~~~~~G~iv~~G~  130 (170)
T d1e3ja2         104 DCSG-------NEKCITIGINITRTGGTLMLVGM  130 (170)
T ss_dssp             ECSC-------CHHHHHHHHHHSCTTCEEEECSC
T ss_pred             ecCC-------ChHHHHHHHHHHhcCCceEEEec
Confidence            4321       13578889999999999998764


No 104
>d1g60a_ c.66.1.11 (A:) Methyltransferase mboII {Moraxella bovis [TaxId: 476]}
Probab=91.44  E-value=0.11  Score=45.92  Aligned_cols=83  Identities=12%  Similarity=0.038  Sum_probs=51.6

Q ss_pred             EEEecCCCC--CCCCCCceEEEeccc-------------cccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHH
Q 012961          265 LGVLGTKRL--PYPSRSFELAHCSRC-------------RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRR  329 (452)
Q Consensus       265 ~~~~d~~~l--p~~d~sFDlVv~s~~-------------~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~  329 (452)
                      +..+|..++  .++++++|+|+++--             .-+|.......+.++.|+|+|||.+++....         .
T Consensus         7 i~~gDcle~l~~lpd~sVdliitdPPY~~~~~~~d~~~~~~~y~~~~~~~~~e~~rvLk~~g~~~~~~~~---------~   77 (256)
T d1g60a_           7 IHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTP---------F   77 (256)
T ss_dssp             EEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEECH---------H
T ss_pred             EEeccHHHHHhhCcCCCcCEEEECCCCCCCcCcCcCCCCHHHHHHHHHHHHHHhhhccccCcccccccCc---------h
Confidence            455564331  256788999988531             0111122345889999999999998865421         1


Q ss_pred             HHHHHHHHHHhCCCEEEEEEeceeEeecccc
Q 012961          330 IWNAMYDLLKSMCWKIVSKKDQTVIWAKPIS  360 (452)
Q Consensus       330 ~~~~l~~ll~~~Gf~~v~~~~~~~iw~kp~~  360 (452)
                      ....+...+...||....    ..+|.|+..
T Consensus        78 ~~~~~~~~~~~~g~~~~~----~iiW~k~~~  104 (256)
T d1g60a_          78 NCAFICQYLVSKGMIFQN----WITWDKRDG  104 (256)
T ss_dssp             HHHHHHHHHHHTTCEEEE----EEEECCCCS
T ss_pred             hhhhhhhhhhcccceeee----eeEeeeccc
Confidence            234566778889997653    358877653


No 105
>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.44  E-value=0.092  Score=44.33  Aligned_cols=90  Identities=14%  Similarity=0.171  Sum_probs=56.8

Q ss_pred             CCCEEEEECC--CCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC--------CCCCCceEEE
Q 012961          215 NIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--------YPSRSFELAH  284 (452)
Q Consensus       215 ~~~~VLDIGC--G~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp--------~~d~sFDlVv  284 (452)
                      +..+||-+|+  |.|..+..+++.  .+..+...+.++...+.+++.|....+   |..+..        ...+.||+|+
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~--~G~~vi~~~~~~~~~~~~~~~Ga~~vi---~~~~~~~~~~i~~~t~~~g~d~v~  102 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARA--YGLKILGTAGTEEGQKIVLQNGAHEVF---NHREVNYIDKIKKYVGEKGIDIII  102 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHTTCSEEE---ETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred             CCCEEEEEeccccccccccccccc--cCcccccccccccccccccccCccccc---ccccccHHHHhhhhhccCCceEEe
Confidence            4458999997  456667777653  233333334455666788887754322   222221        1245699998


Q ss_pred             eccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961          285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                      ....        ...+....++|+|+|.++...
T Consensus       103 d~~g--------~~~~~~~~~~l~~~G~iv~~G  127 (174)
T d1yb5a2         103 EMLA--------NVNLSKDLSLLSHGGRVIVVG  127 (174)
T ss_dssp             ESCH--------HHHHHHHHHHEEEEEEEEECC
T ss_pred             eccc--------HHHHHHHHhccCCCCEEEEEe
Confidence            6431        246888899999999999864


No 106
>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.13  E-value=0.015  Score=49.46  Aligned_cols=96  Identities=17%  Similarity=0.170  Sum_probs=54.7

Q ss_pred             CCCEEEEECCC-CchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCC-CCCCCCceEEEeccccccc
Q 012961          215 NIRNVLDVGCG-VASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL-PYPSRSFELAHCSRCRIDW  292 (452)
Q Consensus       215 ~~~~VLDIGCG-~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~l-p~~d~sFDlVv~s~~~l~~  292 (452)
                      +..+||-+|+| .|.++..+++.  .+.++...+.++..++.+++.|....+...+..+. .-..+.||+|+......+ 
T Consensus        27 ~g~~vlI~GaG~vG~~a~q~ak~--~G~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~d~vi~~~~~~~-  103 (168)
T d1piwa2          27 PGKKVGIVGLGGIGSMGTLISKA--MGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLT-  103 (168)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHH--HTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCST-
T ss_pred             CCCEEEEECCCCcchhHHHHhhh--ccccccccccchhHHHHhhccCCcEEeeccchHHHHHhhhcccceEEEEecCCc-
Confidence            44589999998 56666666652  12333333445555677888775533321111111 112357998875322111 


Q ss_pred             cccHHHHHHHHHHhcCCCcEEEEEe
Q 012961          293 LQRDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       293 ~~d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                          ...+....++|+|+|++++..
T Consensus       104 ----~~~~~~~~~~l~~~G~iv~~G  124 (168)
T d1piwa2         104 ----DIDFNIMPKAMKVGGRIVSIS  124 (168)
T ss_dssp             ----TCCTTTGGGGEEEEEEEEECC
T ss_pred             ----cchHHHHHHHhhccceEEEec
Confidence                112556789999999999864


No 107
>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}
Probab=90.52  E-value=0.17  Score=42.84  Aligned_cols=94  Identities=22%  Similarity=0.277  Sum_probs=57.0

Q ss_pred             CCCEEEEECCCC-chHHHHHhhCCCccc-cCChhhhhHHHHHHHHHcCCCeEEEEecCC--C----C-C-CCCCCceEEE
Q 012961          215 NIRNVLDVGCGV-ASFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGIPSTLGVLGTK--R----L-P-YPSRSFELAH  284 (452)
Q Consensus       215 ~~~~VLDIGCG~-G~~~~~La~~~v~~v-dis~~dis~~~~~~A~~rg~~~~~~~~d~~--~----l-p-~~d~sFDlVv  284 (452)
                      ++.+||-+|||. |.++..+++.  .+. .+...+.++..++.+++.|....+...+..  +    + . .....+|+|+
T Consensus        28 ~G~~VlV~GaG~iG~~~~~~ak~--~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~~g~Dvvi  105 (182)
T d1vj0a2          28 AGKTVVIQGAGPLGLFGVVIARS--LGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFIL  105 (182)
T ss_dssp             BTCEEEEECCSHHHHHHHHHHHH--TTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEE
T ss_pred             CCCEEEEECCCccchhheecccc--cccccccccccccccccccccccceEEEeccccchHHHHHHHHHhhCCCCceEEe
Confidence            345899999983 6666666653  122 344446677777888887754332211110  0    0 0 1124599987


Q ss_pred             eccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961          285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                      -.-..       ...++...++|++||++++..
T Consensus       106 d~vG~-------~~~~~~a~~~l~~~G~iv~~G  131 (182)
T d1vj0a2         106 EATGD-------SRALLEGSELLRRGGFYSVAG  131 (182)
T ss_dssp             ECSSC-------TTHHHHHHHHEEEEEEEEECC
T ss_pred             ecCCc-------hhHHHHHHHHhcCCCEEEEEe
Confidence            43211       236788899999999998765


No 108
>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}
Probab=88.13  E-value=0.27  Score=41.59  Aligned_cols=93  Identities=12%  Similarity=0.091  Sum_probs=55.9

Q ss_pred             CCCEEEEECCCC-chHHHHHhhCCCccc-cCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC------CCCCCceEEEec
Q 012961          215 NIRNVLDVGCGV-ASFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGIPSTLGVLGTKRLP------YPSRSFELAHCS  286 (452)
Q Consensus       215 ~~~~VLDIGCG~-G~~~~~La~~~v~~v-dis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp------~~d~sFDlVv~s  286 (452)
                      +..+||=+|||. |.++..+++.  .+. .+...|.++..++.+++.|....+. ...+.+.      .....||+|+-.
T Consensus        27 ~g~~VlI~GaG~vGl~~~q~ak~--~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~-~~~~~~~~~v~~~t~g~G~D~vid~  103 (174)
T d1jqba2          27 MGSSVVVIGIGAVGLMGIAGAKL--RGAGRIIGVGSRPICVEAAKFYGATDILN-YKNGHIEDQVMKLTNGKGVDRVIMA  103 (174)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHT--TTCSCEEEECCCHHHHHHHHHHTCSEEEC-GGGSCHHHHHHHHTTTSCEEEEEEC
T ss_pred             CCCEEEEEcCCcchhhhhhhhhc--ccccccccccchhhhHHHHHhhCcccccc-ccchhHHHHHHHHhhccCcceEEEc
Confidence            344688899985 6777777763  121 2333455667778888877543221 1111110      122459998754


Q ss_pred             cccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961          287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                      -..       ...+++..++|+|+|.+++..
T Consensus       104 ~g~-------~~~~~~a~~~~~~~G~iv~~G  127 (174)
T d1jqba2         104 GGG-------SETLSQAVKMVKPGGIISNIN  127 (174)
T ss_dssp             SSC-------TTHHHHHHHHEEEEEEEEECC
T ss_pred             cCC-------HHHHHHHHHHHhcCCEEEEEe
Confidence            321       236788899999999999864


No 109
>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=86.18  E-value=0.21  Score=41.44  Aligned_cols=92  Identities=12%  Similarity=0.088  Sum_probs=54.4

Q ss_pred             CCCEEEEECCCC-chHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC-----CCCCCceEEEeccc
Q 012961          215 NIRNVLDVGCGV-ASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP-----YPSRSFELAHCSRC  288 (452)
Q Consensus       215 ~~~~VLDIGCG~-G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp-----~~d~sFDlVv~s~~  288 (452)
                      +..+||=+|+|. |.++..+++.  .+..+...+.++..++.+++.|....+. ....+..     ...+.+|.|++...
T Consensus        27 ~g~~VlV~GaG~vG~~~~~~ak~--~G~~Vi~~~~~~~~~~~a~~~Ga~~~i~-~~~~~~~~~~~~~~~g~~~~i~~~~~  103 (166)
T d1llua2          27 PGQWVAISGIGGLGHVAVQYARA--MGLHVAAIDIDDAKLELARKLGASLTVN-ARQEDPVEAIQRDIGGAHGVLVTAVS  103 (166)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHTTCSEEEE-TTTSCHHHHHHHHHSSEEEEEECCSC
T ss_pred             CCCEEEEeeccccHHHHHHHHHH--cCCccceecchhhHHHhhhccCcccccc-ccchhHHHHHHHhhcCCccccccccc
Confidence            345788899874 4555555553  2344555567777788888877543322 1111110     11233455554331


Q ss_pred             cccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961          289 RIDWLQRDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       289 ~l~~~~d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                              ...+....++|++||++++..
T Consensus       104 --------~~~~~~~~~~l~~~G~iv~~G  124 (166)
T d1llua2         104 --------NSAFGQAIGMARRGGTIALVG  124 (166)
T ss_dssp             --------HHHHHHHHTTEEEEEEEEECC
T ss_pred             --------chHHHHHHHHhcCCcEEEEEE
Confidence                    346888999999999999865


No 110
>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}
Probab=82.37  E-value=0.31  Score=40.65  Aligned_cols=94  Identities=16%  Similarity=0.156  Sum_probs=52.0

Q ss_pred             CCCEEEEECCCC-chHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccccccc
Q 012961          215 NIRNVLDVGCGV-ASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL  293 (452)
Q Consensus       215 ~~~~VLDIGCG~-G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~  293 (452)
                      ++.+||=+|||. |.++..+++.  .+......+.+....+.+++.|....+...+........+.+|+|+-.-..    
T Consensus        30 ~G~~VlI~GaG~vG~~a~qlak~--~Ga~~i~~~~~~~~~~~a~~lGad~~i~~~~~~~~~~~~~~~D~vid~~g~----  103 (168)
T d1uufa2          30 PGKKVGVVGIGGLGHMGIKLAHA--MGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAA----  103 (168)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSS----
T ss_pred             CCCEEEEeccchHHHHHHHHhhc--ccccchhhccchhHHHHHhccCCcEEEECchhhHHHHhcCCCceeeeeeec----
Confidence            345788899873 5566666652  122222223334445677777755332211111111123569988753311    


Q ss_pred             ccHHHHHHHHHHhcCCCcEEEEEe
Q 012961          294 QRDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       294 ~d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                         ...+....++|+++|.+++..
T Consensus       104 ---~~~~~~~~~~l~~~G~iv~~G  124 (168)
T d1uufa2         104 ---PHNLDDFTTLLKRDGTMTLVG  124 (168)
T ss_dssp             ---CCCHHHHHTTEEEEEEEEECC
T ss_pred             ---chhHHHHHHHHhcCCEEEEec
Confidence               124677889999999999865


No 111
>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}
Probab=81.99  E-value=1.3  Score=37.80  Aligned_cols=99  Identities=14%  Similarity=-0.004  Sum_probs=58.2

Q ss_pred             CCCEEEEECCCC-chHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCC--------CCCCceEEEe
Q 012961          215 NIRNVLDVGCGV-ASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPY--------PSRSFELAHC  285 (452)
Q Consensus       215 ~~~~VLDIGCG~-G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~--------~d~sFDlVv~  285 (452)
                      ++.+||-+|||. |.++..++... -+-.+...|.++..++.|++.|...  . .+...-++        ....+|+++-
T Consensus        25 ~G~tVlV~GaG~vGl~a~~~ak~~-ga~~Vi~~d~~~~rl~~a~~~Ga~~--~-~~~~~~~~~~~i~~~t~g~g~D~vid  100 (195)
T d1kola2          25 PGSTVYVAGAGPVGLAAAASARLL-GAAVVIVGDLNPARLAHAKAQGFEI--A-DLSLDTPLHEQIAALLGEPEVDCAVD  100 (195)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTTCEE--E-ETTSSSCHHHHHHHHHSSSCEEEEEE
T ss_pred             CCCEEEEECcCHHHHHHHHHHHhh-cccceeeecccchhhHhhhhccccE--E-EeCCCcCHHHHHHHHhCCCCcEEEEE
Confidence            445899999997 55666665420 0112333356667778888887533  2 22222111        2346898884


Q ss_pred             cccc-----ccc---cccHHHHHHHHHHhcCCCcEEEEEe
Q 012961          286 SRCR-----IDW---LQRDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       286 s~~~-----l~~---~~d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                      .-..     .++   .......++.+.++++|||.+++..
T Consensus       101 ~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G  140 (195)
T d1kola2         101 AVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG  140 (195)
T ss_dssp             CCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred             CccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEee
Confidence            3210     011   1122458999999999999999875


No 112
>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=81.20  E-value=0.48  Score=39.02  Aligned_cols=91  Identities=13%  Similarity=0.082  Sum_probs=52.9

Q ss_pred             CCCEEEEECCCCc-hHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC------CCCCCceEEEecc
Q 012961          215 NIRNVLDVGCGVA-SFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP------YPSRSFELAHCSR  287 (452)
Q Consensus       215 ~~~~VLDIGCG~G-~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp------~~d~sFDlVv~s~  287 (452)
                      +..+||=+|+|.- ..+..++..  .+..+...+.++..++.+++.|....+.  ......      ...+.+|.|++..
T Consensus        27 ~g~~vlv~G~G~iG~~a~~~a~~--~g~~v~~~~~~~~r~~~~k~~Ga~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~  102 (168)
T d1rjwa2          27 PGEWVAIYGIGGLGHVAVQYAKA--MGLNVVAVDIGDEKLELAKELGADLVVN--PLKEDAAKFMKEKVGGVHAAVVTAV  102 (168)
T ss_dssp             TTCEEEEECCSTTHHHHHHHHHH--TTCEEEEECSCHHHHHHHHHTTCSEEEC--TTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred             CCCEEEEeecccchhhhhHHHhc--CCCeEeccCCCHHHhhhhhhcCcceecc--cccchhhhhcccccCCCceEEeecC
Confidence            3457888998864 444444442  2333444456677778888877543222  111110      1123345554322


Q ss_pred             ccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961          288 CRIDWLQRDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                              ....+....++|+|||.+++..
T Consensus       103 --------~~~~~~~a~~~l~~~G~i~~~g  124 (168)
T d1rjwa2         103 --------SKPAFQSAYNSIRRGGACVLVG  124 (168)
T ss_dssp             --------CHHHHHHHHHHEEEEEEEEECC
T ss_pred             --------CHHHHHHHHHHhccCCceEecc
Confidence                    1357899999999999999865


No 113
>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.79  E-value=0.8  Score=37.95  Aligned_cols=94  Identities=15%  Similarity=0.071  Sum_probs=57.0

Q ss_pred             CCCEEEEECCCCc-hHHHHHhhCCCccc-cCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC--------CCCCCceEEE
Q 012961          215 NIRNVLDVGCGVA-SFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--------YPSRSFELAH  284 (452)
Q Consensus       215 ~~~~VLDIGCG~G-~~~~~La~~~v~~v-dis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp--------~~d~sFDlVv  284 (452)
                      +..+||=+|||.. .++..++..  .+. .+...|.++..++.|++.|....+.. +.....        .....+|+|+
T Consensus        26 ~gd~VlI~G~G~iG~~~~~~a~~--~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~-~~~~~~~~~~~~~~~~g~g~Dvvi  102 (171)
T d1pl8a2          26 LGHKVLVCGAGPIGMVTLLVAKA--MGAAQVVVTDLSATRLSKAKEIGADLVLQI-SKESPQEIARKVEGQLGCKPEVTI  102 (171)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHH--TTCSEEEEEESCHHHHHHHHHTTCSEEEEC-SSCCHHHHHHHHHHHHTSCCSEEE
T ss_pred             CCCEEEEECCCccHHHHHHHHHH--cCCceEEeccCCHHHHHHHHHhCCcccccc-cccccccccccccccCCCCceEEE
Confidence            3457999999854 444445442  122 33444667778888988776543322 111110        0124689887


Q ss_pred             eccccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961          285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP  318 (452)
Q Consensus       285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p  318 (452)
                      -.-.       ....++...+.+++||++++...
T Consensus       103 d~~G-------~~~~~~~a~~~~~~gG~iv~~G~  129 (171)
T d1pl8a2         103 ECTG-------AEASIQAGIYATRSGGTLVLVGL  129 (171)
T ss_dssp             ECSC-------CHHHHHHHHHHSCTTCEEEECSC
T ss_pred             eccC-------CchhHHHHHHHhcCCCEEEEEec
Confidence            5431       13478899999999999998764


No 114
>d1g55a_ c.66.1.26 (A:) DNMT2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.77  E-value=1.9  Score=39.18  Aligned_cols=126  Identities=15%  Similarity=0.098  Sum_probs=67.7

Q ss_pred             CEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCC---CCCCceEEEeccccccc-
Q 012961          217 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPY---PSRSFELAHCSRCRIDW-  292 (452)
Q Consensus       217 ~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~---~d~sFDlVv~s~~~l~~-  292 (452)
                      .+|+|+-||.|.+...|....+-.--+...++.+.+++.-+.......+...|..++..   +...+|+++...---.| 
T Consensus         3 ~kv~~lF~G~Gg~~~gl~~aG~~~~~~~a~E~~~~a~~~~~~n~~~~~~~~~di~~~~~~~~~~~~~Dll~ggpPCq~fS   82 (343)
T d1g55a_           3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFT   82 (343)
T ss_dssp             EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC-----
T ss_pred             CEEEEcCcCccHHHHHHHHcCCCCeEEEEEECCHHHHHHHHHHCCCCCcccCchhhCCHhHcCCCCccEEEeeccccccc
Confidence            47999999999988777553221000122344455555555554455566667666542   22368999874211111 


Q ss_pred             -------cccH-HHHHHHHHHhc-----CCCcEEEEEe-CCCCCCChhhHHHHHHHHHHHHhCCCEEEEE
Q 012961          293 -------LQRD-GILLLELDRLL-----RPGGYFVYSS-PEAYAHDPENRRIWNAMYDLLKSMCWKIVSK  348 (452)
Q Consensus       293 -------~~d~-~~~L~ei~RvL-----kPGG~lvi~~-p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~  348 (452)
                             ..+. ..++.++.+++     ||. ++++-- +..     .....++.+.+.++++||.+...
T Consensus        83 ~ag~~~~~~d~r~~l~~~~~~~i~~~~~kPk-~~i~ENV~~l-----~~~~~~~~i~~~l~~~GY~v~~~  146 (343)
T d1g55a_          83 RIGRQGDMTDSRTNSFLHILDILPRLQKLPK-YILLENVKGF-----EVSSTRDLLIQTIENCGFQYQEF  146 (343)
T ss_dssp             -------------CHHHHHHHHGGGCSSCCS-EEEEEEETTG-----GGSHHHHHHHHHHHHTTEEEEEE
T ss_pred             ccccccccccccccccchhhhhHhhhcCCCc-eeeeeccCCc-----ccchhhHHHHhhhhcccccccee
Confidence                   1122 22555555554     475 344432 221     11235778888999999987543


No 115
>d1i4wa_ c.66.1.24 (A:) Transcription factor sc-mtTFB {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=79.77  E-value=1.1  Score=41.68  Aligned_cols=73  Identities=12%  Similarity=-0.018  Sum_probs=43.2

Q ss_pred             HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEec
Q 012961          194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLG  269 (452)
Q Consensus       194 ~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d  269 (452)
                      ...+.+.+.+......  ......+|||||.|.|.++..|++.    .+++++++..-...-. +.  ..+.++.++..|
T Consensus        24 ~i~~~Iv~~~~l~~~~--~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~v~~iE~D~~~~~~L~-~~--~~~~~~~ii~~D   98 (322)
T d1i4wa_          24 TVYNKIFDKLDLTKTY--KHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLN-AK--FEGSPLQILKRD   98 (322)
T ss_dssp             HHHHHHHHHHCGGGTC--CCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHH-HH--TTTSSCEEECSC
T ss_pred             HHHHHHHHHhcCCccc--cccCCCeEEEECCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHH-Hh--ccCCCcEEEeCc
Confidence            4455555555432111  1123458999999999999999752    5788888765432221 11  113457777777


Q ss_pred             CC
Q 012961          270 TK  271 (452)
Q Consensus       270 ~~  271 (452)
                      ..
T Consensus        99 ~l  100 (322)
T d1i4wa_          99 PY  100 (322)
T ss_dssp             TT
T ss_pred             hh
Confidence            54


No 116
>d2uyoa1 c.66.1.57 (A:14-310) Putative methyltransferase ML2640 {Mycobacterium leprae [TaxId: 1769]}
Probab=78.30  E-value=15  Score=32.95  Aligned_cols=104  Identities=16%  Similarity=0.153  Sum_probs=57.8

Q ss_pred             CCEEEEECCCCchHHHHHhh-CCCccccCChhhhhHHHHHHHHHcCC--C--eEEEEecCCCC-C--CCCCCce----EE
Q 012961          216 IRNVLDVGCGVASFGAYLLS-HDIIAMSLAPNDVHENQIQFALERGI--P--STLGVLGTKRL-P--YPSRSFE----LA  283 (452)
Q Consensus       216 ~~~VLDIGCG~G~~~~~La~-~~v~~vdis~~dis~~~~~~A~~rg~--~--~~~~~~d~~~l-p--~~d~sFD----lV  283 (452)
                      .+.|+.+|||-=.-...|.. ..+.-++++-.++-....+...+.+.  .  ..+...|..+- .  +.+..||    .+
T Consensus        90 ~~qvV~LGaGlDTr~~Rl~~~~~~~~~EvD~p~vi~~K~~~l~~~~~~~~~~~~~v~~Dl~~~~~~~L~~~g~d~~~ptl  169 (297)
T d2uyoa1          90 IRQFVILASGLDSRAYRLDWPTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSARTA  169 (297)
T ss_dssp             CCEEEEETCTTCCHHHHSCCCTTCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTTSCEE
T ss_pred             CCeEEEeCcccCChhhhcCCCcCceEEEcCChHHHHHHHHHHHhcCCCCCceEEEecccccchHHHHHHhcCCCCCCCEE
Confidence            34677799998877766642 33333344322222222223333322  2  34444554321 1  1111222    45


Q ss_pred             EeccccccccccH--HHHHHHHHHhcCCCcEEEEEeCC
Q 012961          284 HCSRCRIDWLQRD--GILLLELDRLLRPGGYFVYSSPE  319 (452)
Q Consensus       284 v~s~~~l~~~~d~--~~~L~ei~RvLkPGG~lvi~~p~  319 (452)
                      +...+++.|++..  ..+|+.+.....||+.+++...+
T Consensus       170 ~i~EGvl~YL~~~~~~~ll~~i~~~~~~GS~l~~d~~~  207 (297)
T d2uyoa1         170 WLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSP  207 (297)
T ss_dssp             EEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred             EEEccccccCCHHHHHHHHHHHHHhCCCCCEEEEEecc
Confidence            5566678886544  66999999999999999986543


No 117
>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}
Probab=78.15  E-value=1.4  Score=36.93  Aligned_cols=92  Identities=12%  Similarity=0.005  Sum_probs=56.8

Q ss_pred             CCCEEEEECCCC-chHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC------CCCCCceEE
Q 012961          215 NIRNVLDVGCGV-ASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP------YPSRSFELA  283 (452)
Q Consensus       215 ~~~~VLDIGCG~-G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp------~~d~sFDlV  283 (452)
                      +..+||=+|||. |.++..+++.    .|+.+|     .++...+.|++.|....+.....+...      ...+.+|+|
T Consensus        28 ~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d-----~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~v  102 (174)
T d1e3ia2          28 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAID-----INGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYS  102 (174)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEC-----SCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCceeeeec-----cchHHHHHHHHhCCCcccCCccchhhhhhhHhhhhcCCCcEE
Confidence            445899999987 7777777652    344444     445556788887754433211111110      113568998


Q ss_pred             EeccccccccccHHHHHHHHHHhcCCC-cEEEEEeC
Q 012961          284 HCSRCRIDWLQRDGILLLELDRLLRPG-GYFVYSSP  318 (452)
Q Consensus       284 v~s~~~l~~~~d~~~~L~ei~RvLkPG-G~lvi~~p  318 (452)
                      +-.-.       ....+.+..+.|++| |.+++...
T Consensus       103 ie~~G-------~~~~~~~a~~~~~~g~G~~v~vG~  131 (174)
T d1e3ia2         103 LDCAG-------TAQTLKAAVDCTVLGWGSCTVVGA  131 (174)
T ss_dssp             EESSC-------CHHHHHHHHHTBCTTTCEEEECCC
T ss_pred             EEecc-------cchHHHHHHHHhhcCCeEEEecCC
Confidence            74321       145799999999996 99998763


No 118
>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}
Probab=76.11  E-value=0.96  Score=37.70  Aligned_cols=90  Identities=17%  Similarity=0.072  Sum_probs=54.1

Q ss_pred             CCCEEEEECCCCc-hHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCC-----CCCCCCceEEE
Q 012961          215 NIRNVLDVGCGVA-SFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL-----PYPSRSFELAH  284 (452)
Q Consensus       215 ~~~~VLDIGCG~G-~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~l-----p~~d~sFDlVv  284 (452)
                      +..+||=+|||.- .++..+++.    .|+.+     +.++..++.+++.|.... +..+.++.     .+.++.||+|+
T Consensus        28 ~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~-----~~~~~k~~~a~~~Ga~~~-i~~~~~~~~~~i~~~t~gg~D~vi  101 (174)
T d1f8fa2          28 PASSFVTWGAGAVGLSALLAAKVCGASIIIAV-----DIVESRLELAKQLGATHV-INSKTQDPVAAIKEITDGGVNFAL  101 (174)
T ss_dssp             TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEE-----ESCHHHHHHHHHHTCSEE-EETTTSCHHHHHHHHTTSCEEEEE
T ss_pred             CCCEEEEeCCCHHHhhhhhcccccccceeeee-----ccHHHHHHHHHHcCCeEE-EeCCCcCHHHHHHHHcCCCCcEEE
Confidence            4457998999743 344444432    22233     456667788888775432 22221111     12245799987


Q ss_pred             eccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961          285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                      -.-.       ....++...++++|+|.+++..
T Consensus       102 d~~G-------~~~~~~~~~~~~~~~G~i~~~G  127 (174)
T d1f8fa2         102 ESTG-------SPEILKQGVDALGILGKIAVVG  127 (174)
T ss_dssp             ECSC-------CHHHHHHHHHTEEEEEEEEECC
T ss_pred             EcCC-------cHHHHHHHHhcccCceEEEEEe
Confidence            4321       1357889999999999999865


No 119
>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=74.97  E-value=0.91  Score=37.81  Aligned_cols=92  Identities=14%  Similarity=0.112  Sum_probs=52.8

Q ss_pred             CCCEEEEECC--CCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC------CCCCCceEEEec
Q 012961          215 NIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP------YPSRSFELAHCS  286 (452)
Q Consensus       215 ~~~~VLDIGC--G~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp------~~d~sFDlVv~s  286 (452)
                      +..+||=.|.  |.|.++..++..  .+..+....-++...+.+++.|....+ .....++.      .....||+|+..
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~--~g~~vi~~~~~~~~~~~l~~~Ga~~vi-~~~~~~~~~~v~~~t~~~g~d~v~d~  101 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKM--IGARIYTTAGSDAKREMLSRLGVEYVG-DSRSVDFADEILELTDGYGVDVVLNS  101 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH--HTCEEEEEESSHHHHHHHHTTCCSEEE-ETTCSTHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCEEEEECCCCCcccccchhhcc--ccccceeeecccccccccccccccccc-cCCccCHHHHHHHHhCCCCEEEEEec
Confidence            3458888773  355666666653  122222222344556777777654322 11111110      123579999865


Q ss_pred             cccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961          287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                      ..        ...++++.++|+++|+++...
T Consensus       102 ~g--------~~~~~~~~~~l~~~G~~v~~G  124 (183)
T d1pqwa_         102 LA--------GEAIQRGVQILAPGGRFIELG  124 (183)
T ss_dssp             CC--------THHHHHHHHTEEEEEEEEECS
T ss_pred             cc--------chHHHHHHHHhcCCCEEEEEc
Confidence            42        236788899999999999864


No 120
>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=74.12  E-value=0.79  Score=37.85  Aligned_cols=94  Identities=15%  Similarity=0.154  Sum_probs=55.3

Q ss_pred             CCCEEEEECCC--CchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC------CCCCCceEEEec
Q 012961          215 NIRNVLDVGCG--VASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP------YPSRSFELAHCS  286 (452)
Q Consensus       215 ~~~~VLDIGCG--~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp------~~d~sFDlVv~s  286 (452)
                      +..+||=+||+  .|.++..++... -...+...+.++..++.+++.|....+ ..+..+..      ...+.||+|+..
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~-g~~~V~~~~~~~~~~~~~~~~Ga~~~i-~~~~~~~~~~~~~~~~~~~~d~vid~  104 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAV-SGATIIGVDVREEAVEAAKRAGADYVI-NASMQDPLAEIRRITESKGVDAVIDL  104 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHH-TCCEEEEEESSHHHHHHHHHHTCSEEE-ETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred             CCCEEEEEeccccceeeeeeccccc-ccccccccccchhhHHHHHHcCCceee-ccCCcCHHHHHHHHhhcccchhhhcc
Confidence            44589999973  455555555420 012333335566777888887754322 22211110      123569998854


Q ss_pred             cccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961          287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                      ..       ....++...+.|+|||.+++..
T Consensus       105 ~g-------~~~~~~~a~~~l~~~G~iv~~G  128 (170)
T d1jvba2         105 NN-------SEKTLSVYPKALAKQGKYVMVG  128 (170)
T ss_dssp             CC-------CHHHHTTGGGGEEEEEEEEECC
T ss_pred             cc-------cchHHHhhhhhcccCCEEEEec
Confidence            31       1346788899999999999865


No 121
>d1booa_ c.66.1.11 (A:) m.PvuII N4 cytosine-specific DNA methyltransferase {Proteus vulgaris [TaxId: 585]}
Probab=71.96  E-value=2  Score=38.39  Aligned_cols=93  Identities=15%  Similarity=0.265  Sum_probs=56.7

Q ss_pred             eEEEEecCCC-C-CCCCCCceEEEecccc-------------ccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCh--
Q 012961          263 STLGVLGTKR-L-PYPSRSFELAHCSRCR-------------IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDP--  325 (452)
Q Consensus       263 ~~~~~~d~~~-l-p~~d~sFDlVv~s~~~-------------l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~--  325 (452)
                      ..+..+|..+ | .++++++|+|+.+---             -.|.......+.+++|+|+|+|.+++.....+....  
T Consensus        13 ~~l~~GD~le~l~~l~~~sVdli~tDPPY~~~~~~~~~~~~~~~y~~~~~~~l~~~~rvLk~~G~i~i~~~~~~~~~~~~   92 (320)
T d1booa_          13 GSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVPA   92 (320)
T ss_dssp             EEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTEEE
T ss_pred             CEEEehhHHHHHhhCccCCCCEEEECCCCcCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCcccCcccccccchhhccccc
Confidence            4566777332 1 2567899999985310             011222345799999999999999997765543221  


Q ss_pred             hhHHHHHHHHHHHHhCCCEEEEEEeceeEeeccc
Q 012961          326 ENRRIWNAMYDLLKSMCWKIVSKKDQTVIWAKPI  359 (452)
Q Consensus       326 ~~~~~~~~l~~ll~~~Gf~~v~~~~~~~iw~kp~  359 (452)
                      .....+..+.......||....    ..+|.++.
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~  122 (320)
T d1booa_          93 RSIYNFRVLIRMIDEVGFFLAE----DFYWFNPS  122 (320)
T ss_dssp             ECCHHHHHHHHHHHTTCCEEEE----EEEEECSS
T ss_pred             ccchhHHHHHHHHHhcCceEee----eeecccCC
Confidence            1222445666778888886543    33455443


No 122
>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}
Probab=71.45  E-value=4.8  Score=32.61  Aligned_cols=90  Identities=20%  Similarity=0.160  Sum_probs=53.6

Q ss_pred             EEEEECCCC-c-hHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccccccccc
Q 012961          218 NVLDVGCGV-A-SFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR  295 (452)
Q Consensus       218 ~VLDIGCG~-G-~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~d  295 (452)
                      +|+=||||. | +++..|.+.. ....+.+.|.++..++.+++.+.-.... .+...  ..+...|+|+...-    ...
T Consensus         3 ~I~IIG~G~mG~sla~~L~~~g-~~~~I~~~D~~~~~~~~a~~~~~~~~~~-~~~~~--~~~~~~dlIila~p----~~~   74 (171)
T d2g5ca2           3 NVLIVGVGFMGGSFAKSLRRSG-FKGKIYGYDINPESISKAVDLGIIDEGT-TSIAK--VEDFSPDFVMLSSP----VRT   74 (171)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTT-CCSEEEEECSCHHHHHHHHHTTSCSEEE-SCGGG--GGGTCCSEEEECSC----HHH
T ss_pred             EEEEEccCHHHHHHHHHHHhcC-CCeEEEEEECChHHHHHHHHhhcchhhh-hhhhh--hhccccccccccCC----chh
Confidence            577799985 3 4555565532 2334555667777778888876532222 11111  12345799985431    233


Q ss_pred             HHHHHHHHHHhcCCCcEEEE
Q 012961          296 DGILLLELDRLLRPGGYFVY  315 (452)
Q Consensus       296 ~~~~L~ei~RvLkPGG~lvi  315 (452)
                      ...++.++...++++-.++-
T Consensus        75 ~~~vl~~l~~~~~~~~ii~d   94 (171)
T d2g5ca2          75 FREIAKKLSYILSEDATVTD   94 (171)
T ss_dssp             HHHHHHHHHHHSCTTCEEEE
T ss_pred             hhhhhhhhhccccccccccc
Confidence            45688999999998866653


No 123
>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}
Probab=70.03  E-value=0.76  Score=38.90  Aligned_cols=91  Identities=21%  Similarity=0.202  Sum_probs=54.3

Q ss_pred             CCEEEEECC--CCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCCCeEEEEecC--CC-CCCCCCCceEEEecc
Q 012961          216 IRNVLDVGC--GVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGT--KR-LPYPSRSFELAHCSR  287 (452)
Q Consensus       216 ~~~VLDIGC--G~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~--~~-lp~~d~sFDlVv~s~  287 (452)
                      ..+||=.|+  |.|.++..|++.   .|++.     .-++...+.+++.|....+..-+.  +. .....+.||+|+-.-
T Consensus        32 g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat-----~~s~~k~~~~~~lGa~~vi~~~~~~~~~~~~~~~~gvD~vid~v  106 (176)
T d1xa0a2          32 RGPVLVTGATGGVGSLAVSMLAKRGYTVEAS-----TGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPV  106 (176)
T ss_dssp             GCCEEESSTTSHHHHHHHHHHHHTTCCEEEE-----ESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECS
T ss_pred             CCEEEEEeccchHHHHHHHHHHHcCCceEEe-----cCchHHHHHHHhcccceeeecchhHHHHHHHhhccCcCEEEEcC
Confidence            457888885  466788888763   33333     233344567777765543321111  11 112346799987432


Q ss_pred             ccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012961          288 CRIDWLQRDGILLLELDRLLRPGGYFVYSSPE  319 (452)
Q Consensus       288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~  319 (452)
                      .        ...+.+..++|+|||+++.....
T Consensus       107 g--------g~~~~~~l~~l~~~Griv~~G~~  130 (176)
T d1xa0a2         107 G--------GRTLATVLSRMRYGGAVAVSGLT  130 (176)
T ss_dssp             T--------TTTHHHHHHTEEEEEEEEECSCC
T ss_pred             C--------chhHHHHHHHhCCCceEEEeecc
Confidence            1        23689999999999999987653


No 124
>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}
Probab=67.10  E-value=2.8  Score=34.44  Aligned_cols=90  Identities=12%  Similarity=-0.019  Sum_probs=56.3

Q ss_pred             CCCEEEEECCC--CchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCC--------CCCCceEEE
Q 012961          215 NIRNVLDVGCG--VASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPY--------PSRSFELAH  284 (452)
Q Consensus       215 ~~~~VLDIGCG--~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~--------~d~sFDlVv  284 (452)
                      +..+||=.|+|  .|.++..+++.  .+..+...+.++...+.+++.|....+   |..+-.+        ....+|+|+
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~--~Ga~Vi~~~~s~~k~~~~~~lGa~~vi---~~~~~d~~~~v~~~t~g~g~d~v~  102 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKA--LGAKLIGTVGTAQKAQSALKAGAWQVI---NYREEDLVERLKEITGGKKVRVVY  102 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHH--HTCEEEEEESSHHHHHHHHHHTCSEEE---ETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred             CCCEEEEEccccccchHHHHHHHH--hCCeEeecccchHHHHHHHhcCCeEEE---ECCCCCHHHHHHHHhCCCCeEEEE
Confidence            34588888665  56677777763  233444445667777888887754322   2222211        235699988


Q ss_pred             eccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961          285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                      ....        ...+....++|+++|.+++..
T Consensus       103 d~~g--------~~~~~~~~~~l~~~G~~v~~g  127 (179)
T d1qora2         103 DSVG--------RDTWERSLDCLQRRGLMVSFG  127 (179)
T ss_dssp             ECSC--------GGGHHHHHHTEEEEEEEEECC
T ss_pred             eCcc--------HHHHHHHHHHHhcCCeeeecc
Confidence            5432        125788899999999988754


No 125
>d2oyra1 c.66.1.55 (A:1-250) Hypothetical protein YhiQ {Shigella flexneri [TaxId: 623]}
Probab=67.01  E-value=2.4  Score=37.87  Aligned_cols=71  Identities=11%  Similarity=0.034  Sum_probs=45.3

Q ss_pred             CEEEEECCCCchHHHHHhh--CCCccccCChhhhh--HHHHHHHHHcC-------CCeEEEEecCCC-CCCCCCCceEEE
Q 012961          217 RNVLDVGCGVASFGAYLLS--HDIIAMSLAPNDVH--ENQIQFALERG-------IPSTLGVLGTKR-LPYPSRSFELAH  284 (452)
Q Consensus       217 ~~VLDIGCG~G~~~~~La~--~~v~~vdis~~dis--~~~~~~A~~rg-------~~~~~~~~d~~~-lp~~d~sFDlVv  284 (452)
                      .+|||.-||.|..+..|+.  ..|++++-++....  +..++.+....       .++.++.+|..+ +.-....||+|+
T Consensus        90 ~~VlD~TaGlG~Da~vlA~~G~~V~~iEr~p~l~~ll~d~l~r~~~~~~~~~~~~~ri~li~~Ds~~~L~~~~~~~DvIY  169 (250)
T d2oyra1          90 PDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVY  169 (250)
T ss_dssp             CCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSEEE
T ss_pred             CEEEECCCcccHHHHHHHhCCCEEEEEccCHHHHHHHHHHHHHHHhCchhHHHHhhhheeecCcHHHHHhccCCCCCEEE
Confidence            4799999999999998886  57888887765321  11122222211       146778888433 333346799999


Q ss_pred             ecc
Q 012961          285 CSR  287 (452)
Q Consensus       285 ~s~  287 (452)
                      .--
T Consensus       170 lDP  172 (250)
T d2oyra1         170 LDP  172 (250)
T ss_dssp             ECC
T ss_pred             ECC
Confidence            644


No 126
>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}
Probab=66.23  E-value=0.31  Score=40.93  Aligned_cols=91  Identities=16%  Similarity=0.166  Sum_probs=49.6

Q ss_pred             CCCEEEEECC-C-CchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecC-CCCCCCCCCceEEEecccccc
Q 012961          215 NIRNVLDVGC-G-VASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGT-KRLPYPSRSFELAHCSRCRID  291 (452)
Q Consensus       215 ~~~~VLDIGC-G-~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~-~~lp~~d~sFDlVv~s~~~l~  291 (452)
                      +..+||=.|. | .|.++..+++.  .+..+...+.++...+.+++.|....+...+. .... ..+.+|+|+-..  = 
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~--~G~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~-~~~g~D~v~d~~--G-  100 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARA--MGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAK-AWGGLDLVLEVR--G-  100 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHH--TTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHH-HTTSEEEEEECS--C-
T ss_pred             CCCEEEEEeccccchhhhhhhhcc--cccccccccccccccccccccccceeeehhhhhhhhh-cccccccccccc--c-
Confidence            3457888884 3 35666666653  12222222333444567777775533321111 0111 124699987421  1 


Q ss_pred             ccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961          292 WLQRDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       292 ~~~d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                            ..+....+.|+|+|.+++..
T Consensus       101 ------~~~~~~~~~l~~~G~~v~~G  120 (171)
T d1iz0a2         101 ------KEVEESLGLLAHGGRLVYIG  120 (171)
T ss_dssp             ------TTHHHHHTTEEEEEEEEEC-
T ss_pred             ------hhHHHHHHHHhcCCcEEEEe
Confidence                  13677889999999999753


No 127
>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}
Probab=65.14  E-value=0.46  Score=40.26  Aligned_cols=94  Identities=13%  Similarity=0.104  Sum_probs=54.8

Q ss_pred             CCCEEEEECCCCch-HHHHHhh---CCCccccCChhhhhHHHHHHHHHc-CCCeEEEEecCCCCCCCCCCceEEEecccc
Q 012961          215 NIRNVLDVGCGVAS-FGAYLLS---HDIIAMSLAPNDVHENQIQFALER-GIPSTLGVLGTKRLPYPSRSFELAHCSRCR  289 (452)
Q Consensus       215 ~~~~VLDIGCG~G~-~~~~La~---~~v~~vdis~~dis~~~~~~A~~r-g~~~~~~~~d~~~lp~~d~sFDlVv~s~~~  289 (452)
                      ++.+|+=||+|+.. .+...+.   ..|..+|...     +.++..... +..+.....+.+.+.-.-...|+|++.- +
T Consensus        31 ~pa~V~ViGaGvaG~~A~~~A~~lGA~V~~~D~~~-----~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~aDivI~aa-l  104 (168)
T d1pjca1          31 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV-----ERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAV-L  104 (168)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECC-C
T ss_pred             CCcEEEEECCChHHHHHHHHHhhCCCEEEEEeCcH-----HHHHHHHHhhcccceeehhhhhhHHHhhccCcEEEEee-e
Confidence            46799999999754 4444443   3555665543     333333322 2334444443322221113589999765 3


Q ss_pred             ccccccHHHHHHHHHHhcCCCcEEE
Q 012961          290 IDWLQRDGILLLELDRLLRPGGYFV  314 (452)
Q Consensus       290 l~~~~d~~~~L~ei~RvLkPGG~lv  314 (452)
                      +.--.-+..+-+++.+.+|||..++
T Consensus       105 ipG~~aP~lIt~~mv~~Mk~GSVIV  129 (168)
T d1pjca1         105 VPGRRAPILVPASLVEQMRTGSVIV  129 (168)
T ss_dssp             CTTSSCCCCBCHHHHTTSCTTCEEE
T ss_pred             cCCcccCeeecHHHHhhcCCCcEEE
Confidence            4433444556789999999999887


No 128
>d1dcta_ c.66.1.26 (A:) DNA methylase HaeIII {Haemophilus aegyptius [TaxId: 197575]}
Probab=61.74  E-value=20  Score=31.37  Aligned_cols=127  Identities=6%  Similarity=0.031  Sum_probs=70.0

Q ss_pred             EEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCC-CCCceEEEeccccccc----
Q 012961          218 NVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYP-SRSFELAHCSRCRIDW----  292 (452)
Q Consensus       218 ~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~-d~sFDlVv~s~~~l~~----  292 (452)
                      +|||+=||.|.+..-|..+.+..  +...|+.+.+.+.-+.+. +..+...|...+... -...|+++.+.---.|    
T Consensus         2 k~~~lF~G~Gg~~~gl~~aG~~~--~~a~e~d~~a~~~~~~N~-~~~~~~~Di~~~~~~~~~~~dll~~g~PCq~fS~ag   78 (324)
T d1dcta_           2 NLISLFSGAGGLDLGFQKAGFRI--ICANEYDKSIWKTYESNH-SAKLIKGDISKISSDEFPKCDGIIGGPPCQSWSEGG   78 (324)
T ss_dssp             EEEEESCSSCHHHHHHHHHTCEE--EEEEECCHHHHHHHHHHC-CSEEEESCTTTSCGGGSCCCSEEEECCCCTTTSSSS
T ss_pred             eEEEeCcCcCHHHHHHHHCCCEE--EEEEeCCHHHHHHHHHHC-CCCCccCChhhCCHhHcccccEEeeccccccccccc
Confidence            69999999999888776542211  123344555545444433 345677887776432 1358999874210111    


Q ss_pred             ----cccHH-HH---HHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEE
Q 012961          293 ----LQRDG-IL---LLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK  349 (452)
Q Consensus       293 ----~~d~~-~~---L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~  349 (452)
                          ..+.. .+   +-++...++|.-.++=-++...  .......+..+...+.++||.+....
T Consensus        79 ~~~g~~d~r~~l~~~~~~~i~~~~Pk~~~lENV~~~~--~~~~~~~~~~~l~~l~~lGY~v~~~v  141 (324)
T d1dcta_          79 SLRGIDDPRGKLFYEYIRILKQKKPIFFLAENVKGMM--AQRHNKAVQEFIQEFDNAGYDVHIIL  141 (324)
T ss_dssp             CCCCSSSHHHHHHHHHHHHHHHHCCSEEEEEEEGGGG--SGGGHHHHHHHHHHHHHHHEEEEEEE
T ss_pred             ccccccccccchHHHHHHHHHhhCCceeecccccccc--ccccchhhHHHHhHHhhCCCccceee
Confidence                12332 23   3345566788644443333322  11233456777777888898765543


No 129
>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}
Probab=61.45  E-value=4.1  Score=33.70  Aligned_cols=93  Identities=10%  Similarity=0.058  Sum_probs=56.2

Q ss_pred             CCCEEEEECCCC--chHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC-----CCCCCceEEEecc
Q 012961          215 NIRNVLDVGCGV--ASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP-----YPSRSFELAHCSR  287 (452)
Q Consensus       215 ~~~~VLDIGCG~--G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp-----~~d~sFDlVv~s~  287 (452)
                      ++.+||=.|++.  |..+..|++.  .+..+....-+++..+.+++.|....+...+.....     ...+.+|+|+-.-
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~--~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~v  106 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKL--KGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNV  106 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESS
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHc--cCCEEEEeCCCHHHHHHHHhhhhhhhcccccccHHHHHHHHhhcCCCceeEEec
Confidence            455899777754  5666666653  233333434456667788877755433222111100     1235699987532


Q ss_pred             ccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961          288 CRIDWLQRDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                      .        ...+.+..++|++||.+++..
T Consensus       107 G--------~~~~~~~~~~l~~~G~~v~~G  128 (182)
T d1v3va2         107 G--------GEFLNTVLSQMKDFGKIAICG  128 (182)
T ss_dssp             C--------HHHHHHHGGGEEEEEEEEECC
T ss_pred             C--------chhhhhhhhhccCCCeEEeec
Confidence            1        357899999999999999864


No 130
>d2c7pa1 c.66.1.26 (A:1-327) DNA methylase HhaI {Haemophilus haemolyticus [TaxId: 726]}
Probab=59.01  E-value=23  Score=31.33  Aligned_cols=128  Identities=9%  Similarity=0.019  Sum_probs=68.7

Q ss_pred             CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCC-CCCceEEEeccc-----
Q 012961          215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYP-SRSFELAHCSRC-----  288 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~-d~sFDlVv~s~~-----  288 (452)
                      ...+|||+=||.|.+...|.+..+..  +...|+.+.+++.-+.+....  ...|...+... -..+|+++.+.-     
T Consensus        10 ~~lrv~~lFsG~Gg~~~gl~~aG~~~--v~a~e~d~~a~~~~~~N~~~~--~~~Di~~~~~~~~~~~Dll~ggpPCq~fS   85 (327)
T d2c7pa1          10 TGLRFIDLFAGLGGFRLALESCGAEC--VYSNEWDKYAQEVYEMNFGEK--PEGDITQVNEKTIPDHDILCAGFPCQAFS   85 (327)
T ss_dssp             TTCEEEEETCTTTHHHHHHHHTTCEE--EEEECCCHHHHHHHHHHHSCC--CBSCGGGSCGGGSCCCSEEEEECCCTTTC
T ss_pred             CCCeEEEECccccHHHHHHHHCCCeE--EEEEeCCHHHHHHHHHHCCCC--CcCchhcCchhhcceeeeeecccccchhh
Confidence            45689999999999998887753221  123344455545444432222  23555554322 135899987421     


Q ss_pred             cc--c-ccccHH-HH---HHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEE
Q 012961          289 RI--D-WLQRDG-IL---LLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK  348 (452)
Q Consensus       289 ~l--~-~~~d~~-~~---L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~  348 (452)
                      ..  . -..+.. .+   +.++.+.++|.=.++=-++...  .......++.+...++++||.+...
T Consensus        86 ~ag~~~g~~d~r~~l~~~~~~~i~~~kP~~~~lENV~~~~--~~~~~~~~~~i~~~l~~lGY~~~~~  150 (327)
T d2c7pa1          86 ISGKQKGFEDSRGTLFFDIARIVREKKPKVVFMENVKNFA--SHDNGNTLEVVKNTMNELDYSFHAK  150 (327)
T ss_dssp             TTSCCCGGGSTTSCHHHHHHHHHHHHCCSEEEEEEEGGGG--TGGGGHHHHHHHHHHHHTTBCCEEE
T ss_pred             hhhhhcCCcccchhHHHHHHHHHhccCCcEEecccchhhh--hhccchhhHHhhhHHHhcCCcceee
Confidence            00  0 011221 13   3345556788643332222221  1233346788889999999976544


No 131
>d1booa_ c.66.1.11 (A:) m.PvuII N4 cytosine-specific DNA methyltransferase {Proteus vulgaris [TaxId: 585]}
Probab=57.08  E-value=5  Score=35.58  Aligned_cols=52  Identities=19%  Similarity=0.130  Sum_probs=34.3

Q ss_pred             HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhh--CCCccccCChhhhhHHHHHHHHHc
Q 012961          194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS--HDIIAMSLAPNDVHENQIQFALER  259 (452)
Q Consensus       194 ~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~--~~v~~vdis~~dis~~~~~~A~~r  259 (452)
                      ...+.+.++..         .++..|||.=||+|+.+.+...  +..+|+|     +++..++.|++|
T Consensus       238 ~L~~rlI~~~s---------~~gdiVlDpF~GSGTT~~AA~~lgR~~Ig~E-----l~~~y~~~a~~R  291 (320)
T d1booa_         238 KLPEFFIRMLT---------EPDDLVVDIFGGSNTTGLVAERESRKWISFE-----MKPEYVAASAFR  291 (320)
T ss_dssp             HHHHHHHHHHC---------CTTCEEEETTCTTCHHHHHHHHTTCEEEEEE-----SCHHHHHHHHGG
T ss_pred             HHHHHhhhhcc---------cCCCEEEecCCCCcHHHHHHHHcCCcEEEEe-----CCHHHHHHHHHH
Confidence            44555555554         2345899999999987776654  4556665     455556777766


No 132
>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}
Probab=55.81  E-value=4.8  Score=32.89  Aligned_cols=95  Identities=17%  Similarity=0.058  Sum_probs=53.7

Q ss_pred             CCCEEEEECCCCc-hHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC-----CCCCCceEEEeccc
Q 012961          215 NIRNVLDVGCGVA-SFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP-----YPSRSFELAHCSRC  288 (452)
Q Consensus       215 ~~~~VLDIGCG~G-~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp-----~~d~sFDlVv~s~~  288 (452)
                      +..+||=+|+|.. .++..++... -+..+...+.++..++.+++.+... ++..+.+...     .....+|+|+-...
T Consensus        32 ~g~~vli~GaG~vG~~~~~~a~~~-g~~~vv~~~~~~~k~~~~~~~ga~~-~i~~~~~~~~~~~~~~~~~g~d~vid~~g  109 (172)
T d1h2ba2          32 PGAYVAIVGVGGLGHIAVQLLKVM-TPATVIALDVKEEKLKLAERLGADH-VVDARRDPVKQVMELTRGRGVNVAMDFVG  109 (172)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHH-CCCEEEEEESSHHHHHHHHHTTCSE-EEETTSCHHHHHHHHTTTCCEEEEEESSC
T ss_pred             CCCEEEEeCCChHHHHHHHHHHhh-cCcccccccchhHHHHHHhhcccce-eecCcccHHHHHHHhhCCCCceEEEEecC
Confidence            3457999999854 4444454310 0112222345566677888776443 2222111110     12345998874431


Q ss_pred             cccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961          289 RIDWLQRDGILLLELDRLLRPGGYFVYSSP  318 (452)
Q Consensus       289 ~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p  318 (452)
                             ....++...+.|++||.+++...
T Consensus       110 -------~~~~~~~a~~~l~~~G~iv~~G~  132 (172)
T d1h2ba2         110 -------SQATVDYTPYLLGRMGRLIIVGY  132 (172)
T ss_dssp             -------CHHHHHHGGGGEEEEEEEEECCC
T ss_pred             -------cchHHHHHHHHHhCCCEEEEEeC
Confidence                   13468899999999999998653


No 133
>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}
Probab=53.82  E-value=2.5  Score=35.12  Aligned_cols=87  Identities=20%  Similarity=0.255  Sum_probs=52.3

Q ss_pred             EEEEECC--CCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCCCeEEEEec--CCCC-CCCCCCceEEEecccc
Q 012961          218 NVLDVGC--GVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGVLG--TKRL-PYPSRSFELAHCSRCR  289 (452)
Q Consensus       218 ~VLDIGC--G~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d--~~~l-p~~d~sFDlVv~s~~~  289 (452)
                      +||=-|+  |.|.++..|++.   .|+++     .-++...+.+++.|....+..-+  .+.. ....+.+|+|+-.-. 
T Consensus        26 ~VLV~gaaGgVG~~avQlAk~~Ga~Viat-----~~s~~k~~~~~~lGad~vi~~~~~~~~~~~~~~~~gvd~vid~vg-   99 (167)
T d1tt7a2          26 SVLVTGATGGVGGIAVSMLNKRGYDVVAS-----TGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVG-   99 (167)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEE-----ESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCC-
T ss_pred             EEEEeCCcchHHHHHHHHHHHcCCceEEE-----ecCHHHHHHHHhhcccceEeccchhchhhhcccCCCceEEEecCc-
Confidence            5776664  466777777763   44443     22333446667767654332221  1111 223467999874321 


Q ss_pred             ccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961          290 IDWLQRDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       290 l~~~~d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                             ...+.+..++|+++|++++..
T Consensus       100 -------g~~~~~~~~~l~~~G~iv~~G  120 (167)
T d1tt7a2         100 -------GKQLASLLSKIQYGGSVAVSG  120 (167)
T ss_dssp             -------THHHHHHHTTEEEEEEEEECC
T ss_pred             -------HHHHHHHHHHhccCceEEEee
Confidence                   357899999999999999865


No 134
>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=49.57  E-value=20  Score=28.39  Aligned_cols=87  Identities=18%  Similarity=0.098  Sum_probs=50.0

Q ss_pred             EEEEECCCC--chHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccccccccc
Q 012961          218 NVLDVGCGV--ASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR  295 (452)
Q Consensus       218 ~VLDIGCG~--G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~d  295 (452)
                      +|.=||+|.  +.++..|.+.   +.++...|.++..++.+++.+.-.. ...+.+.+    ...|+|+.+-   . ...
T Consensus         2 kI~iIG~G~mG~~lA~~l~~~---g~~V~~~d~~~~~~~~a~~~~~~~~-~~~~~~~~----~~~DiIilav---p-~~~   69 (165)
T d2f1ka2           2 KIGVVGLGLIGASLAGDLRRR---GHYLIGVSRQQSTCEKAVERQLVDE-AGQDLSLL----QTAKIIFLCT---P-IQL   69 (165)
T ss_dssp             EEEEECCSHHHHHHHHHHHHT---TCEEEEECSCHHHHHHHHHTTSCSE-EESCGGGG----TTCSEEEECS---C-HHH
T ss_pred             EEEEEeecHHHHHHHHHHHHC---CCEEEEEECCchHHHHHHHhhccce-eeeecccc----cccccccccC---c-Hhh
Confidence            466678873  3455666554   3344445556666677777664211 11122222    4579988532   2 233


Q ss_pred             HHHHHHHHHHhcCCCcEEEEE
Q 012961          296 DGILLLELDRLLRPGGYFVYS  316 (452)
Q Consensus       296 ~~~~L~ei~RvLkPGG~lvi~  316 (452)
                      .+.+++++...|+++-.++-.
T Consensus        70 ~~~vl~~l~~~l~~~~iv~~~   90 (165)
T d2f1ka2          70 ILPTLEKLIPHLSPTAIVTDV   90 (165)
T ss_dssp             HHHHHHHHGGGSCTTCEEEEC
T ss_pred             hhhhhhhhhhhcccccceeec
Confidence            466889999988888866543


No 135
>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}
Probab=48.67  E-value=9.3  Score=31.01  Aligned_cols=91  Identities=12%  Similarity=0.013  Sum_probs=50.3

Q ss_pred             CCCEEEEECCCCch-HHHHHhh----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC------CCCCCceEE
Q 012961          215 NIRNVLDVGCGVAS-FGAYLLS----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP------YPSRSFELA  283 (452)
Q Consensus       215 ~~~~VLDIGCG~G~-~~~~La~----~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp------~~d~sFDlV  283 (452)
                      +..+||=+|+|-+. .+..++.    ..|+++     +.++...+.+++.+....+...+..+.-      ...+.+|+|
T Consensus        28 ~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~-----~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~v  102 (176)
T d2jhfa2          28 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGV-----DINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFS  102 (176)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEE-----CSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHcCCceEEee-----cCcHHHHHHHHHhCCeeEEecCCchhHHHHHHHHHhcCCCCEE
Confidence            44589999997443 3333333    234444     4455556778887755433222222210      123569998


Q ss_pred             EeccccccccccHHHHHHHHHHhcCCC-cEEEEEe
Q 012961          284 HCSRCRIDWLQRDGILLLELDRLLRPG-GYFVYSS  317 (452)
Q Consensus       284 v~s~~~l~~~~d~~~~L~ei~RvLkPG-G~lvi~~  317 (452)
                      +-... .      ...++.....+++| |.+++..
T Consensus       103 id~~G-~------~~~~~~a~~~~~~~~g~~~~~~  130 (176)
T d2jhfa2         103 FEVIG-R------LDTMVTALSCCQEAYGVSVIVG  130 (176)
T ss_dssp             EECSC-C------HHHHHHHHHHBCTTTCEEEECS
T ss_pred             EecCC-c------hhHHHHHHHHHhcCCcceEEec
Confidence            75432 1      24567777888886 5666544


No 136
>d2axtj1 f.23.32.1 (J:7-40) Photosystem II reaction center protein J, PsbJ {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=48.37  E-value=12  Score=22.16  Aligned_cols=18  Identities=17%  Similarity=0.455  Sum_probs=10.6

Q ss_pred             HHHHHHHHHHHHHHHhcc
Q 012961           18 VLLGLISVLGLVCLYYGS   35 (452)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~   35 (452)
                      .+..++++..+..||+|+
T Consensus         9 tv~G~~vi~~vG~FfYGs   26 (34)
T d2axtj1           9 TVAGMGVIVIVGLFFYGA   26 (34)
T ss_dssp             HHHHHHHHHHHHHHHHHT
T ss_pred             ehhhhhhHhheeeeeeee
Confidence            344455555556677777


No 137
>d1g60a_ c.66.1.11 (A:) Methyltransferase mboII {Moraxella bovis [TaxId: 476]}
Probab=46.56  E-value=9.9  Score=32.35  Aligned_cols=45  Identities=16%  Similarity=0.107  Sum_probs=29.9

Q ss_pred             HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhh--CCCccccCChhh
Q 012961          194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS--HDIIAMSLAPND  247 (452)
Q Consensus       194 ~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~--~~v~~vdis~~d  247 (452)
                      ...+.+.++..         .++..|||.=||+|+.+.+..+  +..+|+|+.+.-
T Consensus       200 ~L~~~lI~~~s---------~~gd~VlDpF~GSGTT~~aa~~~~R~~ig~El~~~y  246 (256)
T d1g60a_         200 DLIERIIRASS---------NPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEY  246 (256)
T ss_dssp             HHHHHHHHHHC---------CTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHH
T ss_pred             hHHHHHHHHhC---------CCCCEEEECCCCchHHHHHHHHcCCeEEEEeCCHHH
Confidence            44555555554         2345899999999987766654  566777665543


No 138
>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}
Probab=44.59  E-value=7.7  Score=31.95  Aligned_cols=91  Identities=9%  Similarity=-0.012  Sum_probs=49.7

Q ss_pred             CCCEEEEECCCCc-hHHHHHhh----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC------CCCCCceEE
Q 012961          215 NIRNVLDVGCGVA-SFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP------YPSRSFELA  283 (452)
Q Consensus       215 ~~~~VLDIGCG~G-~~~~~La~----~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp------~~d~sFDlV  283 (452)
                      +..+||=+|||.. .++..++.    .+|+++|     .++..++.|++.|....+...+.....      ...+.+|.|
T Consensus        29 ~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd-----~~~~kl~~Ak~~GA~~~in~~~~~~~~~~~~~~~~g~G~d~v  103 (176)
T d1d1ta2          29 PGSTCVVFGLGGVGLSVIMGCKSAGASRIIGID-----LNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYT  103 (176)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEC-----SCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHHTSCCCEE
T ss_pred             CCCEEEEECCCchhHHHHHHHHHcCCceEEEec-----CcHHHHHHHHhcCCcEEECccccchHHHHHHHHhccccceEE
Confidence            4458999999854 34444443    2455554     455566888888865443222211110      123468887


Q ss_pred             EeccccccccccHHHHHHHHH-HhcCCCcEEEEEe
Q 012961          284 HCSRCRIDWLQRDGILLLELD-RLLRPGGYFVYSS  317 (452)
Q Consensus       284 v~s~~~l~~~~d~~~~L~ei~-RvLkPGG~lvi~~  317 (452)
                      +-..      .. ...+.+.. .+++.+|.+++..
T Consensus       104 i~~~------g~-~~~~~~a~~~~~~~~G~~v~vG  131 (176)
T d1d1ta2         104 FEVI------GH-LETMIDALASCHMNYGTSVVVG  131 (176)
T ss_dssp             EECS------CC-HHHHHHHHTTSCTTTCEEEECS
T ss_pred             EEeC------Cc-hHHHHHHHHHhhcCCeEEEEEE
Confidence            6432      11 23344444 4556669999865


No 139
>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}
Probab=44.04  E-value=13  Score=30.35  Aligned_cols=92  Identities=14%  Similarity=0.021  Sum_probs=50.5

Q ss_pred             CCCEEEEECCCCc-hHHHHHhh----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCC------CCCCCCceEE
Q 012961          215 NIRNVLDVGCGVA-SFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL------PYPSRSFELA  283 (452)
Q Consensus       215 ~~~~VLDIGCG~G-~~~~~La~----~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~l------p~~d~sFDlV  283 (452)
                      +..+||=+|||.. .++..+++    ..|+++|     .++..++.|++.|....+...+....      ....+.+|.|
T Consensus        27 ~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d-----~~~~kl~~a~~lGa~~~i~~~~~d~~~~~~~~~~~~~G~d~v  101 (174)
T d1p0fa2          27 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVG-----THKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYA  101 (174)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEC-----SCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred             CCCEEEEECCCchhHHHHHHHHHcCCceeeccC-----ChHHHHHHHHHcCCcEEEcCCCchhHHHHHHHHhcCCCCcEE
Confidence            4458999999854 33444443    2455554     44555688888775543321111110      0123468888


Q ss_pred             EeccccccccccHHHHHHHHHHhcCC-CcEEEEEeC
Q 012961          284 HCSRCRIDWLQRDGILLLELDRLLRP-GGYFVYSSP  318 (452)
Q Consensus       284 v~s~~~l~~~~d~~~~L~ei~RvLkP-GG~lvi~~p  318 (452)
                      +-.-.      . ...+.+....+++ +|.+++...
T Consensus       102 id~~g------~-~~~~~~~~~~~~~~~G~~v~vG~  130 (174)
T d1p0fa2         102 VECAG------R-IETMMNALQSTYCGSGVTVVLGL  130 (174)
T ss_dssp             EECSC------C-HHHHHHHHHTBCTTTCEEEECCC
T ss_pred             EEcCC------C-chHHHHHHHHHHHhcCceEEEEE
Confidence            74321      1 2456666666655 699888653


No 140
>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=43.10  E-value=16  Score=30.00  Aligned_cols=89  Identities=8%  Similarity=0.095  Sum_probs=51.2

Q ss_pred             CCEEEEEC--CCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC-----CCCCCceEEE
Q 012961          216 IRNVLDVG--CGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP-----YPSRSFELAH  284 (452)
Q Consensus       216 ~~~VLDIG--CG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp-----~~d~sFDlVv  284 (452)
                      ..+||=.|  -|.|.++..+++.    .|+++.    ...+.....+++.+....+. ...+++.     ...+.+|+|+
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~----~~~e~~~~l~~~~gad~vi~-~~~~~~~~~~~~~~~~GvDvv~  105 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGIC----GTQEKCLFLTSELGFDAAVN-YKTGNVAEQLREACPGGVDVYF  105 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEE----SSHHHHHHHHHHSCCSEEEE-TTSSCHHHHHHHHCTTCEEEEE
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceeccc----chHHHHhhhhhcccceEEee-ccchhHHHHHHHHhccCceEEE
Confidence            35788877  4688999999873    122222    12233334555555543222 1111111     1135699997


Q ss_pred             eccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961          285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                      -.-.        ...+....++|+++|+++...
T Consensus       106 D~vG--------g~~~~~~~~~l~~~G~iv~~G  130 (187)
T d1vj1a2         106 DNVG--------GDISNTVISQMNENSHIILCG  130 (187)
T ss_dssp             ESSC--------HHHHHHHHTTEEEEEEEEEC-
T ss_pred             ecCC--------chhHHHHhhhccccccEEEec
Confidence            4321        356899999999999999753


No 141
>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}
Probab=42.49  E-value=3.2  Score=35.28  Aligned_cols=35  Identities=14%  Similarity=0.192  Sum_probs=25.4

Q ss_pred             CceEEEeccccccccccHHHHHHHHHHhcCCCcEEE
Q 012961          279 SFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFV  314 (452)
Q Consensus       279 sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lv  314 (452)
                      ..|+|++.- .+.--..+..+-+++.+.+|||..++
T Consensus       114 ~aDlVI~ta-lipG~~aP~lit~~mv~~Mk~GSVIV  148 (183)
T d1l7da1         114 KTDIAITTA-LIPGKPAPVLITEEMVTKMKPGSVII  148 (183)
T ss_dssp             TCSEEEECC-CCTTSCCCCCSCHHHHTTSCTTCEEE
T ss_pred             hhhhheeee-ecCCcccceeehHHHHHhcCCCcEEE
Confidence            579999765 44444444456788999999999887


No 142
>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}
Probab=41.52  E-value=8  Score=32.07  Aligned_cols=89  Identities=18%  Similarity=0.175  Sum_probs=49.6

Q ss_pred             CEEEEECC--CCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCCCeEEEEecC-CCCCCCCCCceEEEeccccc
Q 012961          217 RNVLDVGC--GVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGT-KRLPYPSRSFELAHCSRCRI  290 (452)
Q Consensus       217 ~~VLDIGC--G~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~-~~lp~~d~sFDlVv~s~~~l  290 (452)
                      .+||=.|.  |.|.++..|++.   .|+++.     -++...+.+++.|....+...+. ..-.+....+|.|+-.  +.
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~-----~~~~k~~~~~~lGad~vi~~~~~~~~~~l~~~~~~~vvD~--Vg  105 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVS-----GRESTHEYLKSLGASRVLPRDEFAESRPLEKQVWAGAIDT--VG  105 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEE-----SCGGGHHHHHHHTEEEEEEGGGSSSCCSSCCCCEEEEEES--SC
T ss_pred             CcEEEEEccccchHHHHHHHHHcCCCeEEEe-----cchhHHHHHHhhccccccccccHHHHHHHHhhcCCeeEEE--cc
Confidence            36776652  356677777653   344332     23333456666554332221111 1112344668887622  21


Q ss_pred             cccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961          291 DWLQRDGILLLELDRLLRPGGYFVYSSP  318 (452)
Q Consensus       291 ~~~~d~~~~L~ei~RvLkPGG~lvi~~p  318 (452)
                            +..+.+..+.|+++|+++....
T Consensus       106 ------g~~~~~~l~~l~~~Griv~~G~  127 (177)
T d1o89a2         106 ------DKVLAKVLAQMNYGGCVAACGL  127 (177)
T ss_dssp             ------HHHHHHHHHTEEEEEEEEECCC
T ss_pred             ------hHHHHHHHHHhccccceEeecc
Confidence                  3578999999999999998653


No 143
>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}
Probab=39.89  E-value=12  Score=30.08  Aligned_cols=91  Identities=13%  Similarity=0.071  Sum_probs=48.6

Q ss_pred             CCCEEEEECCCCchHHHHH-hh----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC------CCCCCceEE
Q 012961          215 NIRNVLDVGCGVASFGAYL-LS----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP------YPSRSFELA  283 (452)
Q Consensus       215 ~~~~VLDIGCG~G~~~~~L-a~----~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp------~~d~sFDlV  283 (452)
                      +..+||=+|+|.+.....+ +.    ..|+++     +.++...+.+++.|....+...+.....      ...+.+|+|
T Consensus        28 ~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~-----~~~~~rl~~a~~~GAd~~in~~~~~~~~~~~~~~~~~~G~d~v  102 (175)
T d1cdoa2          28 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAV-----DLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFS  102 (175)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEE-----CSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEE
T ss_pred             CCCEEEEEecCCccchHHHHHHHHhhchheee-----cchHHHHHHHHHcCCcEEEcCCCcchhHHHHHHhhccCCccee
Confidence            4458999999986544333 32    234444     4455566888888754322111111110      112468988


Q ss_pred             EeccccccccccHHHHHHHHHHhcCCC-cEEEEEe
Q 012961          284 HCSRCRIDWLQRDGILLLELDRLLRPG-GYFVYSS  317 (452)
Q Consensus       284 v~s~~~l~~~~d~~~~L~ei~RvLkPG-G~lvi~~  317 (452)
                      +-.-.       ....+.....++++| |.+++..
T Consensus       103 id~~G-------~~~~~~~a~~~~~~g~~~~~~~g  130 (175)
T d1cdoa2         103 LECVG-------NVGVMRNALESCLKGWGVSVLVG  130 (175)
T ss_dssp             EECSC-------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred             eeecC-------CHHHHHHHHHHhhCCCcceeEEE
Confidence            74321       134567777777666 5555443


No 144
>d1eg2a_ c.66.1.11 (A:) m.RsrI N6 adenosine-specific DNA methyltransferase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=38.72  E-value=22  Score=30.36  Aligned_cols=51  Identities=24%  Similarity=0.136  Sum_probs=33.7

Q ss_pred             HHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHh--hCCCccccCChhhhhHHH
Q 012961          193 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLL--SHDIIAMSLAPNDVHENQ  252 (452)
Q Consensus       193 ~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La--~~~v~~vdis~~dis~~~  252 (452)
                      ....+.+.++..         .++..|||-=||+|+.+.+..  .++.+|+|+++.-...+.
T Consensus       194 ~~L~~~~I~~~s---------~~gdiVLDpF~GSGTT~~Aa~~lgR~~ig~El~~~y~~~a~  246 (279)
T d1eg2a_         194 AAVIERLVRALS---------HPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQ  246 (279)
T ss_dssp             HHHHHHHHHHHS---------CTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHH
T ss_pred             hhHHHHHHHhhc---------CCCCEEEecCCCCcHHHHHHHHhCCeEEEEeCCHHHHHHHH
Confidence            445555555554         244589999999998766554  467788887776544333


No 145
>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}
Probab=37.55  E-value=32  Score=27.95  Aligned_cols=92  Identities=12%  Similarity=0.102  Sum_probs=48.8

Q ss_pred             CEEEEECCC---CchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCCCeEEEEe--cCCCCC--------CCCCCc
Q 012961          217 RNVLDVGCG---VASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGVL--GTKRLP--------YPSRSF  280 (452)
Q Consensus       217 ~~VLDIGCG---~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~--d~~~lp--------~~d~sF  280 (452)
                      .+||=+.+|   .|..+..+++.   +++++- ...+-.+...+.+++.|....+..-  +..++.        ...+.+
T Consensus        30 ~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v-~~~~~~~~~~~~~~~lGad~vi~~~~~~~~~~~~~v~~~~~~~g~~v  108 (189)
T d1gu7a2          30 KDWFIQNGGTSAVGKYASQIGKLLNFNSISVI-RDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEA  108 (189)
T ss_dssp             TCEEEESCTTSHHHHHHHHHHHHHTCEEEEEE-CCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCE
T ss_pred             CEEEEEeCCCchHHHHHHHHHhhcCCeEEEEE-ecccccchHHhhhhhccccEEEeccccchhHHHHHHHHHHhhccCCc
Confidence            457777444   45566666652   333331 1222334445666666655433211  111110        012468


Q ss_pred             eEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961          281 ELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       281 DlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                      |+|+-.-      .  ...+....++|+|+|.++...
T Consensus       109 dvv~D~v------g--~~~~~~~~~~l~~~G~~v~~G  137 (189)
T d1gu7a2         109 KLALNCV------G--GKSSTGIARKLNNNGLMLTYG  137 (189)
T ss_dssp             EEEEESS------C--HHHHHHHHHTSCTTCEEEECC
T ss_pred             eEEEECC------C--cchhhhhhhhhcCCcEEEEEC
Confidence            9887432      1  345778889999999999754


No 146
>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=36.81  E-value=15  Score=27.09  Aligned_cols=67  Identities=13%  Similarity=0.095  Sum_probs=35.4

Q ss_pred             CCCCCEEEEEC-CCCch--HHHHHhhC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecc
Q 012961          213 GGNIRNVLDVG-CGVAS--FGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSR  287 (452)
Q Consensus       213 ~~~~~~VLDIG-CG~G~--~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~  287 (452)
                      ....++|.=|| ||+|-  ++..|.+.  .|.|.|...   ++.. +..++.|..+  ........ .  ...|+|+.+.
T Consensus         5 ~~~~~~ihfiGigG~GMs~LA~~L~~~G~~VsGSD~~~---~~~~-~~L~~~Gi~v--~~g~~~~~-i--~~~d~vV~S~   75 (96)
T d1p3da1           5 MRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIAD---GVVT-QRLAQAGAKI--YIGHAEEH-I--EGASVVVVSS   75 (96)
T ss_dssp             CTTCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCC---SHHH-HHHHHTTCEE--EESCCGGG-G--TTCSEEEECT
T ss_pred             chhCCEEEEEEECHHHHHHHHHHHHhCCCEEEEEeCCC---Chhh-hHHHHCCCeE--EECCcccc-C--CCCCEEEECC
Confidence            34566888898 56774  44555553  455555442   2322 3334556543  33322221 2  2479998776


Q ss_pred             c
Q 012961          288 C  288 (452)
Q Consensus       288 ~  288 (452)
                      +
T Consensus        76 A   76 (96)
T d1p3da1          76 A   76 (96)
T ss_dssp             T
T ss_pred             C
Confidence            3


No 147
>d1zkda1 c.66.1.52 (A:2-366) Hypothetical protein RPA4359 {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=33.95  E-value=5.9  Score=36.88  Aligned_cols=20  Identities=20%  Similarity=0.306  Sum_probs=16.6

Q ss_pred             CCEEEEECCCCchHHHHHhh
Q 012961          216 IRNVLDVGCGVASFGAYLLS  235 (452)
Q Consensus       216 ~~~VLDIGCG~G~~~~~La~  235 (452)
                      ..+|+|+|+|.|.++..++.
T Consensus        80 ~~~ivE~GaG~G~La~dil~   99 (365)
T d1zkda1          80 TLRLIEIGPGRGTMMADALR   99 (365)
T ss_dssp             SEEEEEECCTTSHHHHHHHH
T ss_pred             cceEEecCCcccHHHHhhhh
Confidence            45799999999999877654


No 148
>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}
Probab=32.33  E-value=18  Score=28.95  Aligned_cols=91  Identities=10%  Similarity=-0.033  Sum_probs=51.0

Q ss_pred             CCCEEEEECCCC-chHHHHHhh----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCC------CCCCCCceEE
Q 012961          215 NIRNVLDVGCGV-ASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL------PYPSRSFELA  283 (452)
Q Consensus       215 ~~~~VLDIGCG~-G~~~~~La~----~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~l------p~~d~sFDlV  283 (452)
                      +..+||=+|||- |.++..++.    ..|+++     +.++...+.+++-|....+...+..+.      ....+.+|+|
T Consensus        28 ~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~-----~~~~~k~~~ak~lGa~~~i~~~~~~~~~~~~~~~~~~~g~D~v  102 (176)
T d2fzwa2          28 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGV-----DINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYS  102 (176)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEE-----CSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred             CCCEEEEecchhHHHHHHHHHHHHhcCceEEE-----cccHHHHHHHHHhCCcEEEeCCchhhHHHHHHHHHcCCCCcEe
Confidence            445899999872 234444443    234444     334445577777775543322111111      0113569999


Q ss_pred             EeccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961          284 HCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       284 v~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                      +-.-.       ....++....++++||.+++..
T Consensus       103 id~~G-------~~~~~~~~~~~~~~g~~~~~v~  129 (176)
T d2fzwa2         103 FECIG-------NVKVMRAALEACHKGWGVSVVV  129 (176)
T ss_dssp             EECSC-------CHHHHHHHHHTBCTTTCEEEEC
T ss_pred             eecCC-------CHHHHHHHHHhhcCCceeEEEE
Confidence            84321       1357888999999998777653


No 149
>d1whza_ d.50.3.2 (A:) Hypothetical protein TTHA1913 {Thermus thermophilus [TaxId: 274]}
Probab=26.61  E-value=37  Score=23.44  Aligned_cols=27  Identities=11%  Similarity=0.203  Sum_probs=23.1

Q ss_pred             HHHHHHHHhCCCEEEEEEeceeEeecc
Q 012961          332 NAMYDLLKSMCWKIVSKKDQTVIWAKP  358 (452)
Q Consensus       332 ~~l~~ll~~~Gf~~v~~~~~~~iw~kp  358 (452)
                      .++..++++.||..+.....-.+|.++
T Consensus         8 kelik~L~~~Gf~~~rqkGSH~~~~~~   34 (70)
T d1whza_           8 EEVARKLRRLGFVERMAKGGHRLYTHP   34 (70)
T ss_dssp             HHHHHHHHHTTCEEEEEETTEEEEECT
T ss_pred             HHHHHHHHHCCcEEeccCCceeEEEcC
Confidence            578999999999999888777788765


No 150
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=26.21  E-value=1.1e+02  Score=22.72  Aligned_cols=90  Identities=7%  Similarity=-0.037  Sum_probs=46.1

Q ss_pred             EEEEECCCCchHHHHHhhC-CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC----CCCCCceEEEeccccccc
Q 012961          218 NVLDVGCGVASFGAYLLSH-DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP----YPSRSFELAHCSRCRIDW  292 (452)
Q Consensus       218 ~VLDIGCG~G~~~~~La~~-~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp----~~d~sFDlVv~s~~~l~~  292 (452)
                      +|+=+|+  |.++..+++. .-.+.++.-.|.++..++.+.++. ...+..+|..+..    ..-...|.+++...    
T Consensus         2 ~IvI~G~--G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~-~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~----   74 (132)
T d1lssa_           2 YIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-DALVINGDCTKIKTLEDAGIEDADMYIAVTG----   74 (132)
T ss_dssp             EEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-SSEEEESCTTSHHHHHHTTTTTCSEEEECCS----
T ss_pred             EEEEECC--CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh-hhhhccCcccchhhhhhcChhhhhhhcccCC----
Confidence            4555665  6666666541 001233333344555555555442 4566777754432    11246888886421    


Q ss_pred             cccHHHHHHHHHHhcCCCcEEE
Q 012961          293 LQRDGILLLELDRLLRPGGYFV  314 (452)
Q Consensus       293 ~~d~~~~L~ei~RvLkPGG~lv  314 (452)
                      .++...+...+.+.+.+.-.++
T Consensus        75 ~d~~N~~~~~~~k~~~~~~iI~   96 (132)
T d1lssa_          75 KEEVNLMSSLLAKSYGINKTIA   96 (132)
T ss_dssp             CHHHHHHHHHHHHHTTCCCEEE
T ss_pred             cHHHHHHHHHHHHHcCCceEEE
Confidence            1222345566677788875443


No 151
>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=25.51  E-value=18  Score=26.35  Aligned_cols=62  Identities=15%  Similarity=0.228  Sum_probs=30.7

Q ss_pred             EEEEEC-CCCc--hHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccc
Q 012961          218 NVLDVG-CGVA--SFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRC  288 (452)
Q Consensus       218 ~VLDIG-CG~G--~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~  288 (452)
                      +|-=|| ||.|  .++..|.+.  .|.+.|.....    ..+..++.|.++... .+...+    ...|+|+.+.+
T Consensus         3 ~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~----~t~~L~~~Gi~i~~g-h~~~~i----~~~d~vV~SsA   69 (89)
T d1j6ua1           3 KIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETE----RTAYLRKLGIPIFVP-HSADNW----YDPDLVIKTPA   69 (89)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCH----HHHHHHHTTCCEESS-CCTTSC----CCCSEEEECTT
T ss_pred             EEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCCh----hHHHHHHCCCeEEee-eccccc----CCCCEEEEecC
Confidence            344455 5566  345555554  44555544322    223344556554321 233333    34799998774


No 152
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}
Probab=21.08  E-value=96  Score=24.04  Aligned_cols=34  Identities=3%  Similarity=0.081  Sum_probs=23.9

Q ss_pred             CCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEE
Q 012961          278 RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVY  315 (452)
Q Consensus       278 ~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi  315 (452)
                      ...|+|+..-  -  ......+++++...|+++-.+++
T Consensus        71 ~~aD~iii~v--~--~~~~~~~~~~i~~~l~~~~~iv~  104 (184)
T d1bg6a2          71 KDADVILIVV--P--AIHHASIAANIASYISEGQLIIL  104 (184)
T ss_dssp             TTCSEEEECS--C--GGGHHHHHHHHGGGCCTTCEEEE
T ss_pred             cCCCEEEEEE--c--hhHHHHHHHHhhhccCCCCEEEE
Confidence            4589998643  1  22346789999999999886654


No 153
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}
Probab=20.05  E-value=1.1e+02  Score=22.61  Aligned_cols=91  Identities=11%  Similarity=0.040  Sum_probs=43.7

Q ss_pred             EEEECCCCchHHHHHhhC-CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCC----CCCCceEEEecccccccc
Q 012961          219 VLDVGCGVASFGAYLLSH-DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPY----PSRSFELAHCSRCRIDWL  293 (452)
Q Consensus       219 VLDIGCG~G~~~~~La~~-~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~----~d~sFDlVv~s~~~l~~~  293 (452)
                      ++=+|+  |.++..+++. .-.+.++.-.|.++..++.+++.+.  ....+|..+...    .-...|.|++...    .
T Consensus         3 ~iIiG~--G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~--~~~~gd~~~~~~l~~a~i~~a~~vi~~~~----~   74 (134)
T d2hmva1           3 FAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYAT--HAVIANATEENELLSLGIRNFEYVIVAIG----A   74 (134)
T ss_dssp             EEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCS--EEEECCTTCTTHHHHHTGGGCSEEEECCC----S
T ss_pred             EEEECC--CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCC--cceeeecccchhhhccCCccccEEEEEcC----c
Confidence            444555  5666665531 0012333333455555566655553  445567544331    1135787765431    1


Q ss_pred             ccHHHHHHHHHHhcCCCcEEEEEe
Q 012961          294 QRDGILLLELDRLLRPGGYFVYSS  317 (452)
Q Consensus       294 ~d~~~~L~ei~RvLkPGG~lvi~~  317 (452)
                      .+....+..+.+-+.+...++...
T Consensus        75 ~~~~~~~~~~~~~~~~~~~iiar~   98 (134)
T d2hmva1          75 NIQASTLTTLLLKELDIPNIWVKA   98 (134)
T ss_dssp             CHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred             hHHhHHHHHHHHHHcCCCcEEeec
Confidence            122334455555566667766543


Done!