Query 012965
Match_columns 452
No_of_seqs 529 out of 1628
Neff 10.7
Searched_HMMs 46136
Date Fri Mar 29 08:09:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012965.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012965hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4332 Predicted sugar transp 100.0 1.3E-41 2.8E-46 284.2 25.8 425 1-433 1-430 (454)
2 PF05631 DUF791: Protein of un 100.0 1.3E-36 2.9E-41 270.3 32.0 335 4-339 1-335 (354)
3 COG2814 AraJ Arabinose efflux 100.0 8.4E-30 1.8E-34 232.4 33.4 349 49-434 25-386 (394)
4 PRK10406 alpha-ketoglutarate t 100.0 2.1E-29 4.5E-34 243.7 33.3 333 39-395 20-380 (432)
5 PRK09556 uhpT sugar phosphate 100.0 3E-29 6.6E-34 244.9 26.9 336 37-397 25-395 (467)
6 PRK03545 putative arabinose tr 100.0 4.2E-28 9.1E-33 231.7 33.3 338 55-431 27-377 (390)
7 PRK11551 putative 3-hydroxyphe 100.0 2.7E-28 5.8E-33 234.6 31.9 330 36-395 10-352 (406)
8 PRK09952 shikimate transporter 100.0 5.4E-28 1.2E-32 233.8 32.2 335 38-393 19-385 (438)
9 COG2271 UhpC Sugar phosphate p 100.0 1.2E-28 2.5E-33 221.6 24.2 340 32-395 20-390 (448)
10 PRK09705 cynX putative cyanate 100.0 8.4E-28 1.8E-32 229.4 31.4 316 57-409 29-357 (393)
11 PRK15075 citrate-proton sympor 100.0 7.2E-28 1.6E-32 233.0 31.3 336 39-393 13-373 (434)
12 TIGR00903 2A0129 major facilit 100.0 6.6E-28 1.4E-32 226.7 29.6 306 57-395 11-324 (368)
13 PRK10642 proline/glycine betai 100.0 1.4E-27 3.1E-32 234.2 32.5 332 40-391 15-382 (490)
14 PLN00028 nitrate transmembrane 100.0 1.3E-27 2.8E-32 233.3 29.4 340 57-420 56-419 (476)
15 PRK11663 regulatory protein Uh 100.0 1.3E-27 2.8E-32 231.1 28.6 361 37-425 19-415 (434)
16 PRK10213 nepI ribonucleoside t 100.0 1.2E-26 2.6E-31 221.3 34.6 331 55-422 38-379 (394)
17 PRK10489 enterobactin exporter 100.0 1.5E-27 3.1E-32 230.1 28.5 338 42-407 22-374 (417)
18 PRK05122 major facilitator sup 100.0 9.4E-27 2E-31 223.3 32.9 348 42-432 20-387 (399)
19 TIGR02332 HpaX 4-hydroxyphenyl 100.0 4.9E-27 1.1E-31 225.3 30.6 332 37-395 4-377 (412)
20 TIGR01299 synapt_SV2 synaptic 100.0 2E-27 4.3E-32 237.8 28.3 178 35-222 161-357 (742)
21 TIGR00891 2A0112 putative sial 100.0 2.9E-27 6.2E-32 227.4 28.4 348 35-409 6-392 (405)
22 TIGR00890 2A0111 Oxalate/Forma 100.0 1.2E-27 2.5E-32 227.8 25.2 338 57-424 23-372 (377)
23 PRK09874 drug efflux system pr 100.0 2.3E-26 5E-31 221.4 33.8 356 42-431 19-395 (408)
24 PRK15402 multidrug efflux syst 100.0 1.9E-26 4.2E-31 221.5 32.6 317 56-395 32-352 (406)
25 PRK10133 L-fucose transporter; 100.0 2E-26 4.3E-31 222.2 32.0 315 52-392 41-387 (438)
26 TIGR00900 2A0121 H+ Antiporter 100.0 9.9E-27 2.1E-31 220.4 28.8 327 42-395 4-345 (365)
27 PRK12307 putative sialic acid 100.0 1.5E-26 3.3E-31 223.9 30.1 343 37-409 14-385 (426)
28 PRK11102 bicyclomycin/multidru 100.0 2.8E-26 6E-31 218.4 31.4 327 52-404 6-342 (377)
29 PRK10091 MFS transport protein 100.0 6.4E-26 1.4E-30 215.9 32.9 334 42-407 8-350 (382)
30 PRK12382 putative transporter; 100.0 1.1E-25 2.4E-30 215.3 33.0 348 39-429 17-384 (392)
31 PRK11273 glpT sn-glycerol-3-ph 100.0 2.2E-26 4.9E-31 223.7 28.5 358 36-421 24-422 (452)
32 TIGR00710 efflux_Bcr_CflA drug 100.0 1.4E-25 3E-30 214.2 33.4 317 52-395 20-343 (385)
33 PRK11195 lysophospholipid tran 100.0 2.2E-25 4.8E-30 212.5 33.3 323 41-395 7-338 (393)
34 PRK14995 methyl viologen resis 100.0 8.3E-26 1.8E-30 222.0 30.5 331 40-395 5-395 (495)
35 TIGR00899 2A0120 sugar efflux 100.0 1.4E-25 3E-30 213.5 31.1 353 44-429 4-369 (375)
36 PRK11646 multidrug resistance 100.0 1.4E-25 3.1E-30 214.3 31.1 333 40-407 13-359 (400)
37 PRK03699 putative transporter; 100.0 1.3E-25 2.8E-30 214.7 30.8 321 57-410 27-358 (394)
38 PRK15403 multidrug efflux syst 100.0 3.4E-25 7.4E-30 212.5 33.5 321 52-395 31-355 (413)
39 PRK15011 sugar efflux transpor 100.0 2.7E-25 5.9E-30 212.3 31.8 364 34-432 12-389 (393)
40 PRK03893 putative sialic acid 100.0 1.8E-25 4E-30 220.6 31.1 352 33-411 12-432 (496)
41 PRK11652 emrD multidrug resist 100.0 6.3E-25 1.4E-29 210.2 33.4 317 51-395 22-342 (394)
42 PRK10473 multidrug efflux syst 99.9 9.1E-25 2E-29 209.0 33.3 332 45-410 11-352 (392)
43 TIGR00893 2A0114 d-galactonate 99.9 2.5E-25 5.3E-30 213.2 28.4 343 57-424 14-389 (399)
44 PRK10504 putative transporter; 99.9 2.1E-25 4.5E-30 218.7 28.1 319 54-395 27-397 (471)
45 TIGR00892 2A0113 monocarboxyla 99.9 2E-25 4.3E-30 216.7 27.6 337 31-395 9-377 (455)
46 PRK03633 putative MFS family t 99.9 4.8E-25 1E-29 209.9 29.4 346 42-431 11-369 (381)
47 PF07690 MFS_1: Major Facilita 99.9 2.3E-26 5E-31 216.8 19.6 330 45-397 4-345 (352)
48 TIGR00902 2A0127 phenyl propri 99.9 7.4E-25 1.6E-29 208.5 30.0 335 42-409 9-357 (382)
49 PRK10077 xylE D-xylose transpo 99.9 1.8E-24 3.8E-29 212.7 33.1 341 35-395 6-408 (479)
50 PRK10054 putative transporter; 99.9 1E-24 2.2E-29 208.1 30.0 356 39-429 9-379 (395)
51 PRK11043 putative transporter; 99.9 4.4E-24 9.6E-29 204.9 33.5 315 52-395 21-339 (401)
52 PRK15034 nitrate/nitrite trans 99.9 1.7E-24 3.6E-29 205.0 29.8 300 57-382 54-376 (462)
53 TIGR00897 2A0118 polyol permea 99.9 3.1E-24 6.6E-29 205.7 32.0 362 36-425 12-392 (402)
54 TIGR00711 efflux_EmrB drug res 99.9 3.9E-25 8.4E-30 217.8 25.5 319 52-395 17-392 (485)
55 TIGR00887 2A0109 phosphate:H+ 99.9 1.7E-24 3.8E-29 213.2 29.5 344 31-395 6-436 (502)
56 PF05977 MFS_3: Transmembrane 99.9 7.5E-24 1.6E-28 205.5 32.2 357 42-426 15-386 (524)
57 TIGR00895 2A0115 benzoate tran 99.9 1.5E-24 3.2E-29 208.0 26.4 330 36-395 12-382 (398)
58 TIGR00712 glpT glycerol-3-phos 99.9 6.4E-24 1.4E-28 205.8 30.6 334 38-395 24-389 (438)
59 TIGR00886 2A0108 nitrite extru 99.9 1.2E-24 2.6E-29 206.3 24.1 324 51-395 15-361 (366)
60 TIGR00898 2A0119 cation transp 99.9 1.8E-24 3.8E-29 214.0 26.1 309 58-395 110-454 (505)
61 TIGR00894 2A0114euk Na(+)-depe 99.9 3.6E-24 7.7E-29 209.5 27.4 310 66-395 70-404 (465)
62 COG2223 NarK Nitrate/nitrite t 99.9 2.3E-24 4.9E-29 194.6 23.2 346 57-429 34-396 (417)
63 TIGR00883 2A0106 metabolite-pr 99.9 5E-24 1.1E-28 204.0 26.4 330 58-409 14-377 (394)
64 TIGR00879 SP MFS transporter, 99.9 1.2E-23 2.6E-28 206.8 28.9 319 57-395 48-427 (481)
65 TIGR00896 CynX cyanate transpo 99.9 4.8E-24 1E-28 201.2 25.1 318 56-407 19-348 (355)
66 TIGR00881 2A0104 phosphoglycer 99.9 2E-24 4.4E-29 205.6 22.7 315 57-395 15-354 (379)
67 TIGR00901 2A0125 AmpG-related 99.9 1.1E-23 2.4E-28 198.9 27.2 322 56-396 7-354 (356)
68 TIGR00889 2A0110 nucleoside tr 99.9 2.8E-23 6.1E-28 199.4 29.8 350 45-426 10-394 (418)
69 PRK11902 ampG muropeptide tran 99.9 9.3E-23 2E-27 195.6 32.4 362 48-439 10-395 (402)
70 PRK11128 putative 3-phenylprop 99.9 3.6E-23 7.9E-28 197.0 28.9 329 46-409 13-357 (382)
71 TIGR00885 fucP L-fucose:H+ sym 99.9 9E-23 2E-27 195.1 30.9 329 51-407 17-381 (410)
72 PRK11010 ampG muropeptide tran 99.9 6E-22 1.3E-26 193.8 33.7 353 49-430 24-399 (491)
73 PRK09528 lacY galactoside perm 99.9 5.5E-23 1.2E-27 198.4 25.2 352 41-424 14-393 (420)
74 cd06174 MFS The Major Facilita 99.9 2.3E-22 5.1E-27 189.3 27.4 322 48-426 10-344 (352)
75 TIGR00882 2A0105 oligosacchari 99.9 7.3E-22 1.6E-26 189.1 27.8 355 39-425 4-386 (396)
76 TIGR00792 gph sugar (Glycoside 99.9 9E-22 2E-26 191.2 28.0 313 61-395 24-362 (437)
77 PRK10207 dipeptide/tripeptide 99.9 5E-21 1.1E-25 186.4 31.5 335 57-404 35-434 (489)
78 KOG1330 Sugar transporter/spin 99.9 9.4E-24 2E-28 192.0 11.3 334 39-394 31-392 (493)
79 PRK08633 2-acyl-glycerophospho 99.9 5.4E-21 1.2E-25 207.5 33.5 311 57-395 30-366 (1146)
80 PRK06814 acylglycerophosphoeth 99.9 3.2E-21 6.9E-26 208.5 30.9 308 73-395 53-378 (1140)
81 COG0738 FucP Fucose permease [ 99.9 5.6E-20 1.2E-24 165.1 32.0 303 51-384 27-357 (422)
82 KOG0569 Permease of the major 99.9 5.6E-21 1.2E-25 180.2 26.6 322 65-402 47-422 (485)
83 TIGR00924 yjdL_sub1_fam amino 99.9 2.3E-19 4.9E-24 174.8 33.5 339 51-404 24-436 (475)
84 KOG0254 Predicted transporter 99.9 3.3E-20 7.2E-25 182.9 26.4 327 55-394 65-438 (513)
85 PF03825 Nuc_H_symport: Nucleo 99.9 1.9E-19 4.1E-24 169.9 30.0 348 39-409 4-366 (400)
86 KOG2533 Permease of the major 99.9 1.4E-20 3.1E-25 179.9 22.3 303 62-390 71-406 (495)
87 TIGR02718 sider_RhtX_FptX side 99.9 4.4E-19 9.5E-24 169.6 32.0 346 54-426 18-383 (390)
88 TIGR00806 rfc RFC reduced fola 99.9 2.6E-19 5.6E-24 166.5 28.8 330 35-395 22-397 (511)
89 COG2807 CynX Cyanate permease 99.9 7.6E-19 1.6E-23 155.5 29.1 320 57-410 32-362 (395)
90 PRK09584 tppB putative tripept 99.9 3.6E-18 7.9E-23 167.3 35.9 317 61-394 46-425 (500)
91 KOG2532 Permease of the major 99.9 3.7E-20 8.1E-25 176.7 20.9 235 65-310 66-323 (466)
92 KOG2504 Monocarboxylate transp 99.9 2.4E-19 5.2E-24 173.3 24.5 332 36-395 41-432 (509)
93 TIGR01301 GPH_sucrose GPH fami 99.8 1.2E-17 2.6E-22 159.6 34.6 380 50-432 17-469 (477)
94 KOG3764 Vesicular amine transp 99.8 5.6E-20 1.2E-24 163.9 16.9 231 65-312 99-337 (464)
95 TIGR00805 oat sodium-independe 99.8 8.9E-20 1.9E-24 182.5 18.2 265 54-326 50-412 (633)
96 KOG0253 Synaptic vesicle trans 99.8 6.9E-19 1.5E-23 155.1 19.5 329 35-395 72-478 (528)
97 KOG0252 Inorganic phosphate tr 99.8 1.2E-20 2.6E-25 171.2 6.6 374 41-431 41-495 (538)
98 KOG2615 Permease of the major 99.8 8.7E-19 1.9E-23 155.5 18.1 308 74-406 70-413 (451)
99 PRK09669 putative symporter Ya 99.8 3.1E-17 6.8E-22 159.4 29.6 297 62-382 35-350 (444)
100 PF01306 LacY_symp: LacY proto 99.8 4.6E-17 9.9E-22 150.9 23.9 338 42-409 12-377 (412)
101 PF13347 MFS_2: MFS/sugar tran 99.8 4E-17 8.6E-22 157.9 24.3 312 62-395 27-366 (428)
102 PF11700 ATG22: Vacuole efflux 99.8 1.3E-15 2.9E-20 146.6 34.1 343 75-430 73-464 (477)
103 PRK09848 glucuronide transport 99.8 2.3E-16 5E-21 153.6 29.1 315 56-395 27-370 (448)
104 PF06609 TRI12: Fungal trichot 99.8 3.8E-16 8.2E-21 151.5 28.2 313 57-394 64-448 (599)
105 PRK10429 melibiose:sodium symp 99.8 1.1E-15 2.5E-20 149.4 29.3 308 57-382 26-355 (473)
106 TIGR00788 fbt folate/biopterin 99.8 1E-15 2.2E-20 148.8 28.7 332 57-407 46-413 (468)
107 PF00083 Sugar_tr: Sugar (and 99.7 5.2E-22 1.1E-26 193.6 -16.6 302 73-395 47-393 (451)
108 PRK15462 dipeptide/tripeptide 99.7 4E-15 8.7E-20 143.0 30.5 329 62-404 35-433 (493)
109 COG2211 MelB Na+/melibiose sym 99.7 2.8E-15 6E-20 140.5 27.9 307 57-384 32-360 (467)
110 KOG0255 Synaptic vesicle trans 99.7 5.3E-16 1.1E-20 154.0 24.6 301 64-395 110-450 (521)
111 PTZ00207 hypothetical protein; 99.7 9.8E-16 2.1E-20 149.6 24.7 105 57-163 47-160 (591)
112 KOG2563 Permease of the major 99.7 2.7E-14 5.8E-19 130.4 25.2 340 36-395 40-403 (480)
113 COG2270 Permeases of the major 99.7 9E-15 1.9E-19 132.8 21.4 338 75-433 61-428 (438)
114 TIGR01272 gluP glucose/galacto 99.7 1.4E-14 3.1E-19 133.0 21.2 234 120-383 6-262 (310)
115 PRK11462 putative transporter; 99.7 5.4E-13 1.2E-17 129.8 33.2 293 64-381 37-348 (460)
116 KOG4686 Predicted sugar transp 99.6 6.3E-15 1.4E-19 125.7 15.1 315 64-409 71-416 (459)
117 COG3104 PTR2 Dipeptide/tripept 99.6 1.5E-12 3.3E-17 121.2 24.6 328 52-394 37-437 (498)
118 KOG2325 Predicted transporter/ 99.5 2.8E-12 6.2E-17 120.7 23.1 186 34-225 27-235 (488)
119 PF03209 PUCC: PUCC protein; 99.5 2.5E-10 5.4E-15 104.5 30.9 349 63-434 6-398 (403)
120 TIGR00889 2A0110 nucleoside tr 99.4 6.5E-12 1.4E-16 120.8 18.6 165 57-226 228-409 (418)
121 KOG2816 Predicted transporter 99.3 6.5E-09 1.4E-13 99.5 27.2 281 82-395 72-374 (463)
122 PRK09528 lacY galactoside perm 99.2 1.5E-10 3.2E-15 111.9 14.9 145 65-216 255-400 (420)
123 TIGR00902 2A0127 phenyl propri 99.2 8.1E-10 1.7E-14 105.3 19.6 155 51-214 219-374 (382)
124 PRK15011 sugar efflux transpor 99.2 1.4E-09 2.9E-14 104.2 19.4 151 58-220 237-391 (393)
125 PF01770 Folate_carrier: Reduc 99.2 4.7E-08 1E-12 90.8 26.9 330 39-395 4-384 (412)
126 PF03092 BT1: BT1 family; Int 99.2 1.6E-08 3.5E-13 97.4 24.5 323 57-395 10-362 (433)
127 PRK05122 major facilitator sup 99.2 2.3E-09 5.1E-14 102.9 18.2 147 57-216 236-386 (399)
128 TIGR00899 2A0120 sugar efflux 99.1 4.2E-09 9.1E-14 100.1 19.3 144 63-215 226-370 (375)
129 PRK11128 putative 3-phenylprop 99.1 5.9E-09 1.3E-13 99.4 19.8 148 58-214 226-374 (382)
130 PRK09705 cynX putative cyanate 99.1 6E-09 1.3E-13 99.7 19.7 160 57-225 225-387 (393)
131 PRK09874 drug efflux system pr 99.1 4.3E-09 9.3E-14 101.4 18.5 150 57-217 239-396 (408)
132 PRK10489 enterobactin exporter 99.1 7.7E-09 1.7E-13 99.9 19.6 156 58-224 244-404 (417)
133 PRK03633 putative MFS family t 99.1 1.2E-08 2.6E-13 97.3 20.6 149 57-215 220-368 (381)
134 TIGR00890 2A0111 Oxalate/Forma 99.1 3.3E-09 7.1E-14 100.8 16.0 142 59-211 227-374 (377)
135 PRK03545 putative arabinose tr 99.1 1.2E-08 2.5E-13 97.7 19.7 141 64-216 233-377 (390)
136 PRK03699 putative transporter; 99.1 5.8E-09 1.3E-13 99.9 17.0 145 58-211 226-372 (394)
137 PRK11551 putative 3-hydroxyphe 99.1 7.4E-09 1.6E-13 99.7 17.7 147 59-215 242-392 (406)
138 KOG3626 Organic anion transpor 99.0 8.6E-09 1.9E-13 101.6 16.6 267 42-312 98-460 (735)
139 TIGR00880 2_A_01_02 Multidrug 99.0 1.1E-09 2.4E-14 88.0 8.7 126 84-220 10-139 (141)
140 PRK10642 proline/glycine betai 99.0 2.4E-08 5.2E-13 98.4 18.7 160 57-224 270-434 (490)
141 PRK10054 putative transporter; 99.0 1.1E-08 2.4E-13 97.9 15.7 130 248-395 8-140 (395)
142 TIGR00924 yjdL_sub1_fam amino 99.0 9.5E-09 2.1E-13 100.5 14.9 160 244-422 6-180 (475)
143 PRK12382 putative transporter; 99.0 4.2E-08 9.1E-13 94.0 19.0 147 57-216 236-386 (392)
144 COG2814 AraJ Arabinose efflux 99.0 8.9E-08 1.9E-12 88.6 19.2 163 42-216 216-383 (394)
145 PRK09952 shikimate transporter 99.0 5.5E-08 1.2E-12 94.4 19.0 152 64-221 278-434 (438)
146 PRK15462 dipeptide/tripeptide 99.0 2.7E-08 5.9E-13 96.2 16.2 159 250-427 12-182 (493)
147 PF03137 OATP: Organic Anion T 98.9 9.7E-11 2.1E-15 114.8 -1.0 257 53-312 19-373 (539)
148 PRK11663 regulatory protein Uh 98.9 3.7E-08 8E-13 95.6 17.0 110 268-395 43-155 (434)
149 TIGR02718 sider_RhtX_FptX side 98.9 6.7E-08 1.5E-12 92.5 18.5 150 53-213 224-385 (390)
150 cd06174 MFS The Major Facilita 98.9 6.9E-08 1.5E-12 90.7 17.4 148 57-215 195-348 (352)
151 PRK10091 MFS transport protein 98.9 2E-07 4.2E-12 89.0 20.3 143 62-212 225-369 (382)
152 PRK10504 putative transporter; 98.9 8.5E-08 1.8E-12 94.2 18.0 121 60-185 284-412 (471)
153 TIGR00882 2A0105 oligosacchari 98.9 7.6E-08 1.6E-12 92.3 17.2 138 68-213 250-389 (396)
154 PRK11646 multidrug resistance 98.9 3.3E-08 7.2E-13 94.8 14.3 136 267-422 29-173 (400)
155 TIGR00710 efflux_Bcr_CflA drug 98.9 3.5E-08 7.7E-13 94.1 14.5 108 270-395 27-137 (385)
156 KOG3098 Uncharacterized conser 98.9 2.1E-06 4.5E-11 81.3 25.2 311 78-395 56-396 (461)
157 PRK10207 dipeptide/tripeptide 98.9 5E-08 1.1E-12 95.5 15.0 161 245-423 11-183 (489)
158 PF07690 MFS_1: Major Facilita 98.9 3E-08 6.5E-13 93.3 12.9 111 268-395 16-129 (352)
159 TIGR00883 2A0106 metabolite-pr 98.9 3.2E-08 7E-13 94.6 13.4 130 57-194 239-377 (394)
160 PRK10213 nepI ribonucleoside t 98.9 7.3E-08 1.6E-12 92.2 15.6 135 270-424 42-185 (394)
161 TIGR00891 2A0112 putative sial 98.8 2.6E-08 5.6E-13 95.7 12.2 110 268-395 32-144 (405)
162 TIGR02332 HpaX 4-hydroxyphenyl 98.8 8.7E-08 1.9E-12 92.2 15.7 110 268-395 28-140 (412)
163 COG2271 UhpC Sugar phosphate p 98.8 1.7E-07 3.7E-12 86.0 16.2 111 268-396 49-162 (448)
164 PRK09556 uhpT sugar phosphate 98.8 7.6E-08 1.7E-12 94.3 15.1 151 59-214 280-444 (467)
165 PRK11010 ampG muropeptide tran 98.8 2.3E-07 5E-12 91.3 18.4 147 62-216 248-400 (491)
166 TIGR01299 synapt_SV2 synaptic 98.8 7.4E-08 1.6E-12 97.8 15.1 95 284-395 205-299 (742)
167 TIGR00792 gph sugar (Glycoside 98.8 8.9E-08 1.9E-12 93.1 15.3 83 70-153 255-339 (437)
168 PF03825 Nuc_H_symport: Nucleo 98.8 3.9E-07 8.4E-12 86.6 19.1 165 52-221 222-397 (400)
169 PRK15075 citrate-proton sympor 98.8 2.2E-07 4.8E-12 90.2 17.9 134 57-198 258-400 (434)
170 COG2223 NarK Nitrate/nitrite t 98.8 1.4E-07 3E-12 86.5 15.2 200 5-216 177-398 (417)
171 PRK10473 multidrug efflux syst 98.8 3.7E-07 7.9E-12 87.5 18.5 81 63-143 230-311 (392)
172 TIGR00712 glpT glycerol-3-phos 98.8 1.6E-07 3.5E-12 91.3 15.9 113 268-395 47-162 (438)
173 TIGR00897 2A0118 polyol permea 98.8 5.1E-07 1.1E-11 86.7 19.3 147 57-215 242-397 (402)
174 TIGR00900 2A0121 H+ Antiporter 98.8 2.2E-07 4.8E-12 87.8 16.6 95 58-153 232-329 (365)
175 TIGR00886 2A0108 nitrite extru 98.8 1.8E-07 3.8E-12 88.7 15.5 110 267-394 20-133 (366)
176 PRK10077 xylE D-xylose transpo 98.8 2.4E-07 5.2E-12 91.3 16.4 160 59-225 293-463 (479)
177 PF11700 ATG22: Vacuole efflux 98.8 9.4E-07 2E-11 85.7 19.9 154 64-225 309-473 (477)
178 PF05977 MFS_3: Transmembrane 98.8 9.7E-07 2.1E-11 86.6 19.7 145 58-213 239-388 (524)
179 PRK15402 multidrug efflux syst 98.8 7.9E-07 1.7E-11 85.6 19.0 123 64-194 243-372 (406)
180 PRK09848 glucuronide transport 98.8 1.8E-07 3.9E-12 91.2 14.6 119 65-184 257-384 (448)
181 TIGR00892 2A0113 monocarboxyla 98.7 1.6E-07 3.5E-12 91.6 13.9 147 57-213 261-415 (455)
182 TIGR00879 SP MFS transporter, 98.7 4.1E-07 8.8E-12 89.4 16.8 156 57-223 304-474 (481)
183 KOG3762 Predicted transporter 98.7 1.6E-06 3.5E-11 81.8 19.2 148 242-407 366-522 (618)
184 TIGR00896 CynX cyanate transpo 98.7 7.7E-07 1.7E-11 84.0 17.6 131 57-194 217-350 (355)
185 PF01306 LacY_symp: LacY proto 98.7 2.5E-07 5.4E-12 86.6 13.7 145 71-222 258-403 (412)
186 KOG0637 Sucrose transporter an 98.7 6.4E-07 1.4E-11 82.8 15.9 101 52-153 47-170 (498)
187 PRK11902 ampG muropeptide tran 98.7 1.3E-06 2.8E-11 83.9 19.1 143 62-216 235-387 (402)
188 PRK11195 lysophospholipid tran 98.7 1.5E-06 3.3E-11 83.1 19.5 142 63-211 232-374 (393)
189 TIGR00895 2A0115 benzoate tran 98.7 1.5E-07 3.2E-12 90.2 12.5 110 268-395 37-149 (398)
190 TIGR00711 efflux_EmrB drug res 98.7 1.7E-07 3.7E-12 92.4 13.1 127 267-411 21-156 (485)
191 TIGR00893 2A0114 d-galactonate 98.7 1.7E-07 3.6E-12 89.6 12.6 102 277-395 22-126 (399)
192 PRK14995 methyl viologen resis 98.7 2.7E-07 5.9E-12 91.1 14.2 134 267-420 25-168 (495)
193 PRK12307 putative sialic acid 98.7 2.3E-07 4.9E-12 90.0 13.4 102 277-395 46-150 (426)
194 PRK09584 tppB putative tripept 98.7 5.6E-07 1.2E-11 88.7 16.2 159 244-421 17-188 (500)
195 PRK15403 multidrug efflux syst 98.7 6.3E-07 1.4E-11 86.3 15.4 130 278-426 45-183 (413)
196 PRK11273 glpT sn-glycerol-3-ph 98.7 1.5E-06 3.3E-11 84.8 18.0 150 57-216 273-432 (452)
197 PF06963 FPN1: Ferroportin1 (F 98.6 6.1E-05 1.3E-09 71.6 27.6 114 273-394 283-399 (432)
198 PRK11043 putative transporter; 98.6 5.9E-07 1.3E-11 86.3 14.6 135 268-421 23-168 (401)
199 PRK11102 bicyclomycin/multidru 98.6 4.5E-07 9.8E-12 86.3 13.6 108 270-395 13-123 (377)
200 PRK09669 putative symporter Ya 98.6 6E-07 1.3E-11 87.5 14.1 109 76-185 268-385 (444)
201 TIGR00881 2A0104 phosphoglycer 98.6 3.3E-07 7.2E-12 87.1 11.6 108 270-395 17-127 (379)
202 PRK11652 emrD multidrug resist 98.6 1.2E-06 2.6E-11 83.9 15.4 107 271-395 31-140 (394)
203 PRK15034 nitrate/nitrite trans 98.6 1E-06 2.2E-11 84.4 14.5 110 271-393 57-169 (462)
204 PF13347 MFS_2: MFS/sugar tran 98.6 2.1E-06 4.5E-11 83.3 16.8 134 50-185 238-381 (428)
205 PRK03893 putative sialic acid 98.6 8.2E-07 1.8E-11 87.9 14.1 110 268-395 40-152 (496)
206 PLN00028 nitrate transmembrane 98.6 1.4E-06 3.1E-11 85.5 15.5 142 63-216 279-430 (476)
207 TIGR01272 gluP glucose/galacto 98.6 3.6E-06 7.8E-11 77.5 16.9 126 66-204 172-300 (310)
208 TIGR00901 2A0125 AmpG-related 98.6 9.3E-07 2E-11 83.5 13.2 96 57-153 229-337 (356)
209 PRK10133 L-fucose transporter; 98.6 3.2E-06 7E-11 82.0 17.1 135 65-211 288-425 (438)
210 PRK10406 alpha-ketoglutarate t 98.6 5.6E-06 1.2E-10 80.4 18.7 57 57-113 263-320 (432)
211 KOG1330 Sugar transporter/spin 98.6 6.3E-08 1.4E-12 89.6 4.8 97 284-397 71-167 (493)
212 TIGR00903 2A0129 major facilit 98.6 1.3E-06 2.8E-11 82.6 13.7 134 268-422 11-153 (368)
213 TIGR00880 2_A_01_02 Multidrug 98.5 6.4E-07 1.4E-11 71.7 9.6 90 289-395 6-95 (141)
214 KOG4686 Predicted sugar transp 98.5 2.2E-06 4.8E-11 74.3 12.7 140 64-215 292-439 (459)
215 PRK10429 melibiose:sodium symp 98.5 2E-06 4.4E-11 84.4 14.3 120 65-185 259-390 (473)
216 PRK08633 2-acyl-glycerophospho 98.5 6.6E-06 1.4E-10 90.2 19.3 101 62-163 258-363 (1146)
217 PF06813 Nodulin-like: Nodulin 98.5 5E-06 1.1E-10 72.8 14.3 111 57-168 22-141 (250)
218 TIGR00887 2A0109 phosphate:H+ 98.4 3.3E-06 7.1E-11 83.7 13.9 101 284-395 59-159 (502)
219 KOG3810 Micronutrient transpor 98.4 2.4E-05 5.1E-10 70.0 17.4 301 65-395 34-370 (433)
220 TIGR00894 2A0114euk Na(+)-depe 98.4 7.9E-06 1.7E-10 80.2 16.3 152 58-216 282-447 (465)
221 PF06609 TRI12: Fungal trichot 98.4 3.2E-06 7E-11 83.0 13.2 93 284-394 81-173 (599)
222 COG2270 Permeases of the major 98.4 2.8E-06 6.1E-11 78.2 11.7 147 65-222 281-431 (438)
223 PF02487 CLN3: CLN3 protein; 98.4 7.9E-05 1.7E-09 69.6 21.5 302 75-404 62-390 (402)
224 TIGR00885 fucP L-fucose:H+ sym 98.4 5.8E-06 1.3E-10 79.4 14.7 113 268-395 23-138 (410)
225 KOG2615 Permease of the major 98.4 5.1E-06 1.1E-10 75.2 12.5 105 284-406 71-181 (451)
226 TIGR00926 2A1704 Peptide:H+ sy 98.4 8E-05 1.7E-09 75.0 21.9 154 57-216 8-179 (654)
227 KOG0569 Permease of the major 98.4 1.6E-05 3.4E-10 76.2 15.9 162 57-227 290-462 (485)
228 PRK11462 putative transporter; 98.4 4.3E-05 9.4E-10 74.6 19.4 112 73-185 264-384 (460)
229 COG2211 MelB Na+/melibiose sym 98.4 1.6E-05 3.5E-10 75.4 15.6 114 68-183 268-391 (467)
230 KOG3764 Vesicular amine transp 98.3 4.1E-06 9E-11 76.3 10.6 125 281-424 106-237 (464)
231 TIGR00898 2A0119 cation transp 98.3 6E-06 1.3E-10 82.0 12.3 95 284-395 130-224 (505)
232 PRK06814 acylglycerophosphoeth 98.3 2.8E-05 6.1E-10 85.1 18.5 105 60-165 248-377 (1140)
233 TIGR00805 oat sodium-independe 98.3 2.6E-06 5.7E-11 86.1 9.5 125 268-395 53-216 (633)
234 TIGR00806 rfc RFC reduced fola 98.3 2.9E-05 6.2E-10 73.7 14.5 104 274-395 51-158 (511)
235 TIGR00788 fbt folate/biopterin 98.2 1.6E-05 3.6E-10 77.7 13.3 93 65-158 281-384 (468)
236 COG2807 CynX Cyanate permease 98.2 0.00011 2.4E-09 66.5 17.1 156 51-213 222-379 (395)
237 COG0477 ProP Permeases of the 98.2 7.7E-05 1.7E-09 68.3 16.9 102 54-156 19-125 (338)
238 COG3104 PTR2 Dipeptide/tripept 98.2 1.5E-05 3.3E-10 75.2 11.6 175 243-434 16-206 (498)
239 PF12832 MFS_1_like: MFS_1 lik 98.2 3.6E-06 7.9E-11 59.0 5.4 67 46-112 9-75 (77)
240 PTZ00207 hypothetical protein; 98.1 4.1E-05 9E-10 75.8 12.2 116 268-396 47-164 (591)
241 KOG2504 Monocarboxylate transp 98.0 8.1E-05 1.8E-09 72.9 13.4 149 57-212 318-469 (509)
242 TIGR01301 GPH_sucrose GPH fami 98.0 8.8E-05 1.9E-09 71.8 12.6 129 264-394 20-159 (477)
243 KOG0254 Predicted transporter 98.0 6.2E-05 1.3E-09 74.8 11.6 95 284-395 92-186 (513)
244 PF03209 PUCC: PUCC protein; 97.9 0.0012 2.6E-08 61.3 18.2 170 41-216 212-395 (403)
245 KOG2532 Permease of the major 97.9 0.00017 3.7E-09 69.7 12.5 125 284-423 76-208 (466)
246 KOG3762 Predicted transporter 97.9 5.9E-05 1.3E-09 71.6 8.2 155 50-211 384-539 (618)
247 PF06779 DUF1228: Protein of u 97.8 3E-05 6.6E-10 54.8 4.5 76 53-128 8-84 (85)
248 TIGR00769 AAA ADP/ATP carrier 97.8 0.0055 1.2E-07 59.2 21.1 55 61-115 27-87 (472)
249 KOG0255 Synaptic vesicle trans 97.8 0.00017 3.6E-09 71.9 11.1 91 284-391 121-211 (521)
250 PF05978 UNC-93: Ion channel r 97.7 0.00074 1.6E-08 54.6 11.5 74 79-153 44-117 (156)
251 KOG3574 Acetyl-CoA transporter 97.7 0.021 4.5E-07 52.5 21.3 325 59-396 52-414 (510)
252 KOG0252 Inorganic phosphate tr 97.7 0.00046 1E-08 64.5 11.2 98 284-391 87-184 (538)
253 COG0738 FucP Fucose permease [ 97.5 0.0024 5.3E-08 58.9 13.5 129 57-195 256-387 (422)
254 KOG2325 Predicted transporter/ 97.4 0.0017 3.6E-08 62.3 11.7 135 245-394 31-172 (488)
255 PF05631 DUF791: Protein of un 97.4 0.022 4.8E-07 52.2 17.8 89 284-390 72-165 (354)
256 PF06813 Nodulin-like: Nodulin 97.4 0.0043 9.3E-08 54.5 12.7 127 256-396 11-140 (250)
257 PF00083 Sugar_tr: Sugar (and 97.3 6.3E-06 1.4E-10 80.5 -6.8 98 284-395 49-146 (451)
258 KOG2533 Permease of the major 97.2 0.0017 3.6E-08 63.3 8.9 89 57-145 293-388 (495)
259 PF00854 PTR2: POT family; In 97.1 0.027 5.9E-07 53.4 16.1 106 103-216 2-120 (372)
260 KOG3097 Predicted membrane pro 97.1 0.084 1.8E-06 47.5 17.4 90 91-181 77-180 (390)
261 KOG0253 Synaptic vesicle trans 96.9 0.0036 7.9E-08 57.0 7.8 122 85-224 394-524 (528)
262 KOG2563 Permease of the major 96.7 0.02 4.4E-07 53.8 11.0 111 285-404 83-195 (480)
263 KOG1479 Nucleoside transporter 96.6 0.44 9.5E-06 44.8 18.7 40 352-391 344-383 (406)
264 TIGR00939 2a57 Equilibrative N 96.4 0.98 2.1E-05 43.7 22.6 51 352-402 373-425 (437)
265 PF13000 Acatn: Acetyl-coenzym 95.9 1.7 3.7E-05 42.0 21.8 46 353-398 407-452 (544)
266 TIGR00926 2A1704 Peptide:H+ sy 95.9 0.097 2.1E-06 53.2 11.8 151 273-432 12-180 (654)
267 PF12832 MFS_1_like: MFS_1 lik 95.8 0.049 1.1E-06 38.2 6.5 46 267-313 19-67 (77)
268 KOG1237 H+/oligopeptide sympor 95.7 1.2 2.5E-05 44.7 18.3 154 57-216 58-242 (571)
269 PF03219 TLC: TLC ATP/ADP tran 95.7 2.4 5.1E-05 41.6 19.8 78 234-312 267-350 (491)
270 KOG2816 Predicted transporter 95.2 0.12 2.5E-06 50.2 9.1 118 290-429 71-194 (463)
271 KOG3880 Predicted small molecu 94.9 0.68 1.5E-05 41.6 11.9 71 75-145 65-136 (409)
272 PF03092 BT1: BT1 family; Int 94.7 0.37 8E-06 46.7 11.3 107 274-391 15-128 (433)
273 PF05978 UNC-93: Ion channel r 94.3 0.51 1.1E-05 38.2 9.4 87 289-393 45-131 (156)
274 PF03137 OATP: Organic Anion T 93.1 0.019 4.1E-07 57.0 -1.1 118 275-394 29-184 (539)
275 KOG0637 Sucrose transporter an 92.8 0.29 6.3E-06 46.4 6.2 129 264-394 48-186 (498)
276 TIGR00769 AAA ADP/ATP carrier 91.6 15 0.00031 36.1 17.3 48 356-403 133-183 (472)
277 PRK03612 spermidine synthase; 90.9 11 0.00024 37.5 15.4 32 65-96 43-74 (521)
278 COG0477 ProP Permeases of the 90.6 1.4 3.1E-05 39.6 8.6 97 283-394 41-138 (338)
279 PF00854 PTR2: POT family; In 90.2 2.8 6E-05 39.8 10.3 113 316-434 4-123 (372)
280 PF01770 Folate_carrier: Reduc 90.2 15 0.00033 35.1 14.7 128 270-415 25-163 (412)
281 PF07672 MFS_Mycoplasma: Mycop 89.7 7.7 0.00017 34.2 11.4 64 196-259 39-106 (267)
282 KOG3098 Uncharacterized conser 88.2 27 0.00058 34.0 15.3 96 66-162 272-392 (461)
283 KOG3574 Acetyl-CoA transporter 87.7 10 0.00022 35.6 11.2 137 245-388 28-170 (510)
284 COG3202 ATP/ADP translocase [E 86.5 34 0.00073 33.4 20.5 68 47-114 33-104 (509)
285 PF02487 CLN3: CLN3 protein; 83.5 43 0.00092 32.0 13.7 86 280-383 58-143 (402)
286 PRK03612 spermidine synthase; 81.8 33 0.00071 34.3 13.0 25 356-380 115-139 (521)
287 KOG3626 Organic anion transpor 80.6 2.9 6.2E-05 42.7 5.1 124 276-401 124-289 (735)
288 PF06963 FPN1: Ferroportin1 (F 79.7 28 0.0006 33.7 11.3 107 65-172 286-406 (432)
289 PF06779 DUF1228: Protein of u 76.7 10 0.00022 27.0 5.6 60 268-330 12-74 (85)
290 COG4769 Predicted membrane pro 71.5 14 0.00031 29.7 5.7 46 87-137 88-133 (181)
291 KOG4332 Predicted sugar transp 71.1 37 0.0008 30.4 8.6 79 284-380 75-154 (454)
292 PF13386 DsbD_2: Cytochrome C 69.6 69 0.0015 27.1 14.1 28 164-191 35-62 (199)
293 COG2119 Predicted membrane pro 67.5 58 0.0013 27.0 8.5 24 91-114 153-176 (190)
294 PF03219 TLC: TLC ATP/ADP tran 60.9 1.8E+02 0.0039 28.9 16.4 27 371-397 164-190 (491)
295 COG5336 Uncharacterized protei 57.6 10 0.00022 28.0 2.4 31 79-109 49-80 (116)
296 PF01733 Nucleoside_tran: Nucl 54.6 5 0.00011 36.9 0.6 51 352-402 249-301 (309)
297 PF09930 DUF2162: Predicted tr 54.1 63 0.0014 28.0 7.0 102 5-116 69-172 (224)
298 TIGR00939 2a57 Equilibrative N 50.5 2.5E+02 0.0054 27.4 11.8 32 352-384 107-138 (437)
299 KOG2601 Iron transporter [Inor 48.9 2.5E+02 0.0053 26.8 16.0 41 354-394 389-429 (503)
300 PF02990 EMP70: Endomembrane p 48.1 1.8E+02 0.004 29.1 10.3 27 286-312 302-328 (521)
301 PF11395 DUF2873: Protein of u 48.0 30 0.00065 19.7 2.7 22 5-26 18-39 (43)
302 PF07332 DUF1469: Protein of u 47.8 1.2E+02 0.0027 23.1 7.3 6 234-239 109-114 (121)
303 TIGR02123 TRAP_fused TRAP tran 47.5 1.9E+02 0.0042 29.6 10.4 26 47-72 121-146 (613)
304 PF11872 DUF3392: Protein of u 37.0 62 0.0013 24.1 3.8 37 242-278 43-79 (106)
305 TIGR03717 R_switched_YjbE inte 36.3 1.9E+02 0.0041 24.0 7.1 22 6-27 63-84 (176)
306 KOG1479 Nucleoside transporter 33.5 4.4E+02 0.0096 25.3 13.2 34 351-385 117-150 (406)
307 COG3202 ATP/ADP translocase [E 32.3 5.1E+02 0.011 25.7 16.0 104 293-398 74-195 (509)
308 PF11947 DUF3464: Protein of u 31.6 1.1E+02 0.0023 24.7 4.6 29 370-398 113-141 (153)
309 PF03222 Trp_Tyr_perm: Tryptop 31.3 4.8E+02 0.01 25.0 13.2 25 353-377 187-211 (394)
310 PF03596 Cad: Cadmium resistan 30.4 1.1E+02 0.0025 25.7 4.9 14 90-103 153-166 (191)
311 PRK11469 hypothetical protein; 29.7 2.9E+02 0.0062 23.2 7.2 25 92-116 155-179 (188)
312 KOG3810 Micronutrient transpor 29.5 5E+02 0.011 24.7 9.8 76 76-152 275-353 (433)
313 TIGR02106 cyd_oper_ybgT cyd op 27.8 78 0.0017 17.4 2.2 18 3-20 1-18 (30)
314 PF03596 Cad: Cadmium resistan 27.7 3.8E+02 0.0081 22.7 8.8 12 267-278 113-124 (191)
315 PF08173 YbgT_YccB: Membrane b 26.7 85 0.0018 17.0 2.2 17 3-19 1-17 (28)
316 PRK11588 hypothetical protein; 26.1 6.7E+02 0.014 25.0 14.1 38 92-129 136-176 (506)
317 PF06123 CreD: Inner membrane 24.6 6.6E+02 0.014 24.5 11.0 24 370-393 364-387 (430)
318 KOG4830 Predicted sugar transp 24.4 1.5E+02 0.0033 26.5 4.6 44 62-105 42-94 (412)
319 PRK11469 hypothetical protein; 24.4 4.3E+02 0.0093 22.2 15.7 19 294-312 148-166 (188)
320 PF07672 MFS_Mycoplasma: Mycop 23.6 5.4E+02 0.012 23.1 13.9 70 76-145 144-225 (267)
321 PF04346 EutH: Ethanolamine ut 22.7 6.4E+02 0.014 23.6 8.5 57 85-141 59-119 (354)
322 PRK11715 inner membrane protei 22.0 7.5E+02 0.016 24.1 10.9 24 370-393 370-393 (436)
323 PRK14749 hypothetical protein; 21.8 1.2E+02 0.0027 16.5 2.3 17 3-19 1-17 (30)
324 COG3086 RseC Positive regulato 20.7 2.8E+02 0.006 22.1 4.9 49 397-445 88-136 (150)
325 COG2962 RarD Predicted permeas 20.1 6.6E+02 0.014 22.8 10.6 61 242-309 64-125 (293)
No 1
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-41 Score=284.20 Aligned_cols=425 Identities=87% Similarity=1.411 Sum_probs=375.1
Q ss_pred CcchhhHHHHHHHHHHHHHhhccccccCCCCCCccchhhHHHHHHHHHHHHhhhhhhhhHHHHHhhcCCCcchhHHHHHH
Q 012965 1 MEMFFYLVFGALGAVVAALELSKTNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIA 80 (452)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~i~~~~g~s~~~~g~~~~~ 80 (452)
||.|||++++++..+|+.+|+++.++++.+.++.+.+++..++.++.+++.++|+++|++.++++.||....++|.++..
T Consensus 1 MevfyylvFggl~a~vagLELSk~nkdRintsssFnsFknnyllVyslmmAgDWLQgPYvYyLYstYgFgkG~IgqLfia 80 (454)
T KOG4332|consen 1 MEVFYYLVFGGLAAVVAGLELSKCNKDRINTSSSFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGDIGQLFIA 80 (454)
T ss_pred CeeeehHHHHHHHHHHHHhhhhhcccccccCchhHHHHhhhHHHHHHHHHhhhhhcCceeeeeehhcCccCCccceeeec
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhccccccccccccCcchHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc-ccccch
Q 012965 81 GFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFE 159 (452)
Q Consensus 81 ~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~-~~r~~~ 159 (452)
++...++++.+.|.++||-|||+.-+.-++.+.++++.-.++.|..++++|.+.|++.+..+.+-.+|++.|+ ++|+..
T Consensus 81 GfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiTKhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~Fe 160 (454)
T KOG4332|consen 81 GFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITKHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRGFE 160 (454)
T ss_pred ccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHhhcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccCCh
Confidence 9999999999999999999999998888888888888899999999999999999999999999999999999 699999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHh
Q 012965 160 QQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGA 239 (452)
Q Consensus 160 ~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (452)
..+....++-....|+.+-.+++++.+..+.++.+.|...+|...+.+..+...+....|.|+.+++.+.++..++.+..
T Consensus 161 qqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil~~W~ENygdps~~kdlltqf~ga 240 (454)
T KOG4332|consen 161 QQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVILSSWSENYGDPSENKDLLTQFKGA 240 (454)
T ss_pred HhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHhhhhhccCChhhhHHHHHHhhHh
Confidence 99999999989989999999999999999999999999999999888888888777778999988888888777888888
Q ss_pred hHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCchHHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHH
Q 012965 240 AVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIV 319 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~ 319 (452)
.+.+..|++...+..+..++...+|.++..|.|..-.+..+.+.|.+++.++..+++|+-+..++..|-..|.+..+.+.
T Consensus 241 a~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqiv 320 (454)
T KOG4332|consen 241 ARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIV 320 (454)
T ss_pred HHHHhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCcccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHH
Confidence 88899999999999999999999999999999998877777778999999999999999999998888776766678888
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhhhhHH
Q 012965 320 FVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIF 399 (452)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~ 399 (452)
+.+....+.++...... .|.. .++ ...+++++++..+.|..||...-+-++..|++.|++.+.+++.+.+.+
T Consensus 321 f~vs~a~l~Lpilt~~v-sP~k---es~----~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLnif 392 (454)
T KOG4332|consen 321 FLVSIAALLLPILTSSV-SPSK---ESP----SESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIF 392 (454)
T ss_pred HHHHHHHHHHHHHHhcc-CCCc---CCc----hHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhHh
Confidence 88777777777665543 2221 122 245889999999999999999999999999999999999999999998
Q ss_pred HHHHHhc--cccCCc--hHHHHHHHHHHHHHHHHHHhh
Q 012965 400 VCVVLYN--VDAFPI--TVMFGMCSIFLLVASVLQRRL 433 (452)
Q Consensus 400 ~~~~l~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 433 (452)
+...++. ....+. ...+.+|......+.+..++.
T Consensus 393 vClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~~~~L 430 (454)
T KOG4332|consen 393 VCLVLYNLHVDAFPTTTRNMFGICSAFLFVASILQRRL 430 (454)
T ss_pred hhhhheecccccCccccchhhhhhHHHHHHHHHHHHHH
Confidence 8877754 233333 477888887777766655544
No 2
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=100.00 E-value=1.3e-36 Score=270.27 Aligned_cols=335 Identities=63% Similarity=1.067 Sum_probs=295.9
Q ss_pred hhhHHHHHHHHHHHHHhhccccccCCCCCCccchhhHHHHHHHHHHHHhhhhhhhhHHHHHhhcCCCcchhHHHHHHHHh
Q 012965 4 FFYLVFGALGAVVAALELSKTNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFG 83 (452)
Q Consensus 4 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~ 83 (452)
|||++|++++.+|+.+|+.++++++..+++.++++|+.++.++.+...+|++|+|++..+++++|++..|++.++..++.
T Consensus 1 ~~~~~f~~l~~~~~~l~~~~~~~~~~~~~~~f~~Fqr~yl~vY~La~~aDWLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~ 80 (354)
T PF05631_consen 1 FYYLVFGVLAAVCAALELSKRTKDRASTNPAFRRFQRKYLLVYLLAMAADWLQGPYLYALYESYGFSEHQIAILFVAGFA 80 (354)
T ss_pred CchhHHHHHHHHHHHHheecccccccccChHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHcCCCHHHHHHHHHHHHH
Confidence 79999999999999999999988888888899999999999999999999999999999999999999999999999999
Q ss_pred hhhhccccccccccccCcchHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhcccccchhhHH
Q 012965 84 SSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWL 163 (452)
Q Consensus 84 ~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~ 163 (452)
.+.+.+++.|.++||+|||+.-+..++++++++++-..++++.++++|++.|++.+..+.+-.+|++.|+++|+....+.
T Consensus 81 Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L 160 (354)
T PF05631_consen 81 SSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWL 160 (354)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHH
Confidence 99999999999999999999999999999999988889999999999999999999999999999999998899888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHh
Q 012965 164 SITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAI 243 (452)
Q Consensus 164 ~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (452)
...++.....++++-.+.++.++..+.+..+.+...||.....+..++.+++...|+|+.++.++..+..++.++..+.+
T Consensus 161 ~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~~~~a~~~i 240 (354)
T PF05631_consen 161 SDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGSFREAWRAI 240 (354)
T ss_pred HHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHHHHHHHHHH
Confidence 88777655577888888889999988887777778999999998888888888889998877555555566777778889
Q ss_pred hcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCchHHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHH
Q 012965 244 ASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVS 323 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~ 323 (452)
.+||+.+.+.....++.+.+|.++..|.|.+..++.+.+.|.+++.+++..++|+.+..++..|- .|.+..+.....+.
T Consensus 241 ~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~~-~~~e~~l~~v~~~a 319 (354)
T PF05631_consen 241 LSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPDDEELPLGLIFSSFMVAMMLGSSLFSRLLSKS-LRPESLLRYVFAVA 319 (354)
T ss_pred HcCchhHHHHHHHHHHHHHHHHheeeeeceecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHH
Confidence 99999999999999999999999999999988666677779999999999999999997766554 46666667777777
Q ss_pred HHHHHHHHHHhhhcCC
Q 012965 324 SVSLLLPIVTSFLVAP 339 (452)
Q Consensus 324 ~~~~~~~~~~~~~~~~ 339 (452)
++++..+........|
T Consensus 320 a~~l~~pv~~~~~~~p 335 (354)
T PF05631_consen 320 AVSLAIPVVTHIFGQP 335 (354)
T ss_pred HHHHHHHHHHhhccCC
Confidence 7777777666444333
No 3
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.4e-30 Score=232.40 Aligned_cols=349 Identities=16% Similarity=0.196 Sum_probs=245.5
Q ss_pred HHHhhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHH
Q 012965 49 MMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKIL 127 (452)
Q Consensus 49 ~~~~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l 127 (452)
....+.+..+.+|++.+|+|+|..+.|+..+.+..+..+++|+...+.||+.||++++..+.++.++. ++++++||+.+
T Consensus 25 igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~L 104 (394)
T COG2814 25 IGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVL 104 (394)
T ss_pred HHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 33456666999999999999999999999999888888999999999999999999999999999986 78999999999
Q ss_pred HHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHH
Q 012965 128 MIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAA 204 (452)
Q Consensus 128 ~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~ 204 (452)
+++|++.|++.|..++...+ +..+. ++|++..+... .|..++.++|.+++.++.+. ||||..|...
T Consensus 105 l~aR~~~g~a~G~f~~i~~~-~a~~lvpp~~~~~Aiaiv~--------~G~tlA~v~GvPLGt~ig~~--~GWR~~F~~i 173 (394)
T COG2814 105 LLARALAGLAHGVFWSIAAA-LAARLVPPGKRGRALALVF--------TGLTLATVLGVPLGTFLGQL--FGWRATFLAI 173 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHcCccchhhHHHHHH--------HHHHHHHHHhccHHHHHHHH--hhHHHHHHHH
Confidence 99999999999999998855 65555 55666555332 23444445555555555533 6788999999
Q ss_pred HHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch-
Q 012965 205 ACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH- 283 (452)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~- 283 (452)
+.+.++.....+...|+++ ++++.+.. .++..+.+|+|+.+.......+...+.+.. .+|.-.++++..+.+.
T Consensus 174 a~l~ll~~~~~~~~lP~~~-~~~~~~~~----~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~-ftYi~P~L~~v~g~s~~ 247 (394)
T COG2814 174 AVLALLALLLLWKLLPPSE-ISGSLPGP----LRTLLRLLRRPGVLLGLLATFLFMTGHFAL-YTYIRPFLESVAGFSVS 247 (394)
T ss_pred HHHHHHHHHHHHHhCCCcc-CCCCCCcc----hhHHHHHhcCchHHHHHHHHHHHHcchhhh-HHhHHHHHHHccCCCHh
Confidence 9999988888887888111 11111111 112235678899998888888888877774 6666667777777655
Q ss_pred --HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHH
Q 012965 284 --GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTF 361 (452)
Q Consensus 284 --~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (452)
+.....++++.++|+.++|++.|| +.|+ .+.....+.......+.+.... .+.......++
T Consensus 248 ~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~--~l~~~~~l~a~~~l~l~~~~~~--------------~~~~~~~~~~w 310 (394)
T COG2814 248 AVSLVLLAFGIAGFIGNLLGGRLADR-GPRR--ALIAALLLLALALLALTFTGAS--------------PALALALLFLW 310 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccc-cchh--HHHHHHHHHHHHHHHHHHhcch--------------HHHHHHHHHHH
Confidence 577788899999999999999999 6555 2444444444444443333332 13445555557
Q ss_pred HHHhhchhhHHHHHHhhcCCcccccchhhhhhhhh------hHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHhhh
Q 012965 362 EACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPL------NIFVCVVLYNVDAFPITVMFGMCSIFLLVASVLQRRLM 434 (452)
Q Consensus 362 g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (452)
++......+..+....+.. ++.+..+.+++.... +..+|+.+.+. +++......+++..+.+..+.....
T Consensus 311 g~a~~~~~~~~~~~~a~~~-p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~--~g~~~~~~~~a~l~~~a~~~~~~~~ 386 (394)
T COG2814 311 GFAFSPALQGLQTRLARLA-PDAADLAGSLNVAAFNLGIALGAALGGLVLDA--LGYAATGWVGAALLLLALLLALLSA 386 (394)
T ss_pred HHHhhhhhhHHHHHhcccC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hchHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777666666666666633 445677776665543 34666777777 5555555555555555554444333
No 4
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.98 E-value=2.1e-29 Score=243.68 Aligned_cols=333 Identities=14% Similarity=0.145 Sum_probs=202.7
Q ss_pred hHHHHHHHHHHHHhhhhh----hhhHHHHHhhcC---CCcch---hHHHHHHHHhhhhhccccccccccccCcchHHHHH
Q 012965 39 KNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYG---FGKGE---IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTY 108 (452)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~----~p~l~~i~~~~g---~s~~~---~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~ 108 (452)
+++.+....+....+++| ....|.+.++++ .+..+ .+.+++..++...++++++|+++||+||||++..+
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~ 99 (432)
T PRK10406 20 RIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLIS 99 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 344455555556666666 444566778874 44443 34566677776778888999999999999999999
Q ss_pred HHHHHHHH-HHhcCccHH--------HHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHH
Q 012965 109 CLTYILSC-ITKHSPQYK--------ILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNG 176 (452)
Q Consensus 109 ~~~~~i~~-l~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ 176 (452)
..+++++. ++++++++. .+++.|+++|++.|..++...+ +++|+ ++|++..+ ....+...|..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~-~i~e~~p~~~rg~~~~----~~~~~~~~G~~ 174 (432)
T PRK10406 100 VCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSAT-YMSEVAVEGRKGFYAS----FQYVTLIGGQL 174 (432)
T ss_pred HHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHH-HHHHhCCCCcccHHHH----HHHHHHHHHHH
Confidence 99999976 678888764 5899999999999999998866 88888 33443333 23333344444
Q ss_pred HHHHHHHhhhhhhhc--ccCCCcchhhHHHHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHH
Q 012965 177 LVAILSGLFGNLLVD--SFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGA 254 (452)
Q Consensus 177 ig~~~~~~l~~~l~~--~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (452)
+++.+...+...+.+ ...|+||.+|.+.++..++..++ ....||+++.++++ ++.+.+.++++|+++.+....
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~-~~~~~e~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~ 249 (432)
T PRK10406 175 LALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWL-RRQLDETSQQETRA----LKEAGSLKGLWRNRRAFIMVL 249 (432)
T ss_pred HHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHH-HhcCCCCchHHHhh----hcccccHHHHHhhHHHHHHHH
Confidence 444443333322211 12578999998877766654333 22445543221111 011223556777887776655
Q ss_pred HHHhh-hchhhhhhhhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHH
Q 012965 255 IQSLF-EGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLP 330 (452)
Q Consensus 255 ~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 330 (452)
...+. ....+. ...|.|.++++..+.+. +.......+...++..+.|+++||++||+. +.....+..+.....
T Consensus 250 ~~~~~~~~~~~~-~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~--~~~~~~~~~~~~~~~ 326 (432)
T PRK10406 250 GFTAAGSLCFYT-FTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTS--MLCFGSLAALFTVPI 326 (432)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHH--HHHHHHHHHHHHHHH
Confidence 54443 333343 57899998876666544 445555566778888899999999998873 333322222222111
Q ss_pred HHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 331 IVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
...... . .+. ........+..+..+...+..+.+.+|.+|++.|++++|+.+..
T Consensus 327 ~~~~~~-~------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~ 380 (432)
T PRK10406 327 LSALQN-V------SSP----YAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAV 380 (432)
T ss_pred HHHHHc-C------CcH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHH
Confidence 111111 0 000 11112222222333334456778899999999999999987654
No 5
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.97 E-value=3e-29 Score=244.87 Aligned_cols=336 Identities=16% Similarity=0.034 Sum_probs=210.2
Q ss_pred hhhHHHHHHHHHHHHhhhhh----hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHH
Q 012965 37 SFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTY 112 (452)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~----~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~ 112 (452)
|..+..+..+++......++ ++..|.+.+|+|+|..+.|++.+..+....++.++.|+++||+|||+++..+.++.
T Consensus 25 ~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~ 104 (467)
T PRK09556 25 KPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILS 104 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHH
Confidence 33344455555555554544 67788999999999999999988888888888999999999999999998888877
Q ss_pred HHHH-HH-----hcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 012965 113 ILSC-IT-----KHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSG 183 (452)
Q Consensus 113 ~i~~-l~-----~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~ 183 (452)
++.. +. +.++|++.+++.|+++|++.+...|.... +++|+ ++|++..+..... .. +|+.+++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~-~i~~~~~~~~rg~a~gi~~~~----~~----lG~~l~~ 175 (467)
T PRK09556 105 AICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYS-TITRWTPRRKRGRFLGFWNIS----HN----LGGAGAG 175 (467)
T ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHH-HHHHHcCccceeeeEEeeecc----cc----hhhhHHH
Confidence 6643 32 34789999999999999999998888766 78877 4577766644332 22 3444444
Q ss_pred hhhhhhhccc-CCCcchhhHHHHHHHHHHHHHHHhcc---ccccCCCCc------c---hhH---HHH--HHHh-hHHhh
Q 012965 184 LFGNLLVDSF-SLGPVAPFDAAACFLAIGMVIILSSW---TENYGDPSE------S---KDL---LTQ--FRGA-AVAIA 244 (452)
Q Consensus 184 ~l~~~l~~~~-~~~~~~~f~~~~~~~~~~~~~~~~~~---~~~~~~~~~------~---~~~---~~~--~~~~-~~~~~ 244 (452)
.+..++.+.. +.+|+..|...+++.++..++..... ||+.+..++ . ++. .++ ..+. .+..+
T Consensus 176 ~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 255 (467)
T PRK09556 176 GVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEYVL 255 (467)
T ss_pred HHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHHHH
Confidence 4444333321 22467777766655554433333222 322110000 0 000 000 0111 22367
Q ss_pred cchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHH
Q 012965 245 SDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFV 321 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~ 321 (452)
+++.++...+...+.....+. ...|.|.|+++..|.+. +.......++.+++.++.|+++||++||+. ......
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~-~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~--~~~~~~ 332 (467)
T PRK09556 256 KNPVIWLLCFANIFLYIVRIG-IDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRA--LVACIA 332 (467)
T ss_pred cChHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCch--HHHHHH
Confidence 888888887776666665554 58899999987777755 455566778899999999999999998873 222222
Q ss_pred HHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhhhh
Q 012965 322 VSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLN 397 (452)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~ 397 (452)
........... ... . + .+...+..++.|+..............|.+|++.|+++.|+.+...+
T Consensus 333 ~~~~~~~~~~~-~~~-~-------~----~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~ 395 (467)
T PRK09556 333 LALIIFTLGVY-QHA-T-------S----EYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAY 395 (467)
T ss_pred HHHHHHHHHHH-Hhc-C-------c----HHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHH
Confidence 22222111111 111 0 0 01233444444543322223334667799999999999999876533
No 6
>PRK03545 putative arabinose transporter; Provisional
Probab=99.97 E-value=4.2e-28 Score=231.73 Aligned_cols=338 Identities=15% Similarity=0.129 Sum_probs=223.1
Q ss_pred hhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHH
Q 012965 55 LQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRIL 133 (452)
Q Consensus 55 ~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l 133 (452)
...|++|.+.+|+|.|+++.|++.+...+...+++++.|+++||+||||++..+..+.+++. .+++++|++.+++.|++
T Consensus 27 ~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~ 106 (390)
T PRK03545 27 VPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIG 106 (390)
T ss_pred HHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 34677899999999999999999888887777888899999999999999999999998876 67899999999999999
Q ss_pred HHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHH
Q 012965 134 GGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAI 210 (452)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~ 210 (452)
+|++.+...+...+ ++.|. ++|++..+.. + .+..+|..+++.+++.+.++ ++||..|.+.+++.++
T Consensus 107 ~G~~~~~~~~~~~~-~i~~~~~~~~r~~~~g~~----~----~~~~~g~~ig~~l~~~l~~~--~gw~~~f~~~~~~~~l 175 (390)
T PRK03545 107 IAFAHAIFWSITAS-LAIRVAPAGKKAQALSLL----A----TGTALAMVLGLPLGRVIGQY--LGWRTTFLAIGGGALI 175 (390)
T ss_pred HHHHHHHHHHHHHH-HHHHhCChhhhhhHHHHH----H----HHHHHHHHHHhhHHHHHHHH--hcHHHHHHHHHHHHHH
Confidence 99999988887756 66665 4555544432 2 23445556666666655543 4667788887776665
Q ss_pred HHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---HHHH
Q 012965 211 GMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIF 287 (452)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~ 287 (452)
.........||+++++++ . .++.++.+|+++++.......+.....+. ...+.|.+.++..+.+. +...
T Consensus 176 ~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~g~s~~~~~~~~ 247 (390)
T PRK03545 176 TLLLLIKLLPLLPSEHSG---S----LKSLPLLFRRPALVSLYLLTVVVVTAHFT-AYSYIEPFVQQVAGLSENFATLLL 247 (390)
T ss_pred HHHHHHHhCCCCCCCCcc---h----HHHHHHHHhCcHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCccHHHHHH
Confidence 555444444543322111 1 12344567778776554444333333333 34566666665555433 5666
Q ss_pred HHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhc
Q 012965 288 ATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGI 367 (452)
Q Consensus 288 ~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 367 (452)
....+++++++++.+++.||+++|+ +..+..+.............. .+...+...+.|++.+.
T Consensus 248 ~~~~~~~~~g~~~~g~l~dr~~~~~---~~~~~~~~~~~~~~l~~~~~~--------------~~~~~~~~~l~g~~~~~ 310 (390)
T PRK03545 248 LLFGGAGIIGSVLFSRLGNRHPSGF---LLIAIALLLVCLLLLLPAANS--------------EWHLSVLSIFWGIAIMC 310 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhccchhH---HHHHHHHHHHHHHHHHHHhch--------------HHHHHHHHHHHHHHHhc
Confidence 7778899999999999999998765 333333333332222111111 02445566777777776
Q ss_pred hhhHHHHHHhhcCCcccccchhhhhhhh------hhHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHH
Q 012965 368 FWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGMCSIFLLVASVLQR 431 (452)
Q Consensus 368 ~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (452)
..+.......|..|+ .|++++|+.+.. .++.+++.+.+.. ++...+...+.+.+++.....
T Consensus 311 ~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~--g~~~~~~~~~~~~~~~~~~~~ 377 (390)
T PRK03545 311 IGLAMQVKVLKLAPD-ATDVAMALFSGIFNIGIGAGALLGNQVSLHL--GLSSIGYVGAALALAALVWSI 377 (390)
T ss_pred chHHHHHHHHHhCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--ChhHHHHHHHHHHHHHHHHHH
Confidence 667777888888774 678887766543 3556677777763 444555555544444444433
No 7
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.97 E-value=2.7e-28 Score=234.62 Aligned_cols=330 Identities=18% Similarity=0.158 Sum_probs=212.9
Q ss_pred chhhHHHHHHHHHHHHhhhhh----hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHH
Q 012965 36 NSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLT 111 (452)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~----~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~ 111 (452)
++++|..+..+....+.++++ ++..|.+.+|+|.|+.+.|++.+...+...+++++.|+++||+|||+++..+.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 89 (406)
T PRK11551 10 SSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVAL 89 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH
Confidence 345666666666666666655 6777888999999999999999998888888899999999999999999999988
Q ss_pred HHHHH-HHhcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 012965 112 YILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGN 187 (452)
Q Consensus 112 ~~i~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~ 187 (452)
..++. ++.++++++.+++.|++.|++.+...+...+ ++.|. ++|++..+.. . .+..+|..+++.++.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~----~----~~~~~g~~~~~~~~~ 160 (406)
T PRK11551 90 FGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIA-LTSEAVGPRLRGTAVSLM----Y----CGVPFGGALASVIGV 160 (406)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHH-HHHHHcCHHHHHHHHHHH----H----HHHHHHHHHHHHHHH
Confidence 88865 6688999999999999999999998887756 77776 3344443322 2 234455556666655
Q ss_pred hhhcccCCCcchhhHHHHHHHHHHHHHHHhccccccCCCCcc--hhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhh
Q 012965 188 LLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSES--KDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYT 265 (452)
Q Consensus 188 ~l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (452)
.+.+ .++|+..|.+.+++.++.........||++++++++ ++..++..+...+..++++.+............ +.
T Consensus 161 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 237 (406)
T PRK11551 161 LAAG--DAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRAPVLRALFGEGRATATLLLWISYFFTLIV-LY 237 (406)
T ss_pred HHcc--ccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhhhhHHHHhhhhhhhHHHHHHHHHHHHHHH-HH
Confidence 5543 356777887766555544444443456543221111 111111111111111112222222222222222 22
Q ss_pred hhhhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 012965 266 FVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNV 342 (452)
Q Consensus 266 ~~~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (452)
....|.|.+.++ .+.+. +.......++.++++++.|++.||+|||+. +........+...........
T Consensus 238 ~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~--~~~~~~~~~~~~~~~~~~~~~------ 308 (406)
T PRK11551 238 FLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRV--VLLIYAGILASLAALAAAPSF------ 308 (406)
T ss_pred HHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHH--HHHHHHHHHHHHHHHHhcCcH------
Confidence 346678887765 34433 677777788999999999999999998773 333222222222222111111
Q ss_pred CCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 343 KSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
+...+..++.+++.+...+..+++.+|.+|+++|+++.|+.+..
T Consensus 309 ---------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 352 (406)
T PRK11551 309 ---------AGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAV 352 (406)
T ss_pred ---------HHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHh
Confidence 23445556667777767788899999999999999999887764
No 8
>PRK09952 shikimate transporter; Provisional
Probab=99.97 E-value=5.4e-28 Score=233.82 Aligned_cols=335 Identities=15% Similarity=0.082 Sum_probs=198.6
Q ss_pred hhHHHHHHHHHHHHhhhhh----hhhHHH-HHhhc--CCCcchhHHHH-----HHHHhhhhhccccccccccccCcchHH
Q 012965 38 FKNNYLLVYSLMMAGDWLQ----GPYVYY-LYSTY--GFGKGEIGQLF-----IAGFGSSMLFGTIVGSLADKQGRKRAC 105 (452)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~----~p~l~~-i~~~~--g~s~~~~g~~~-----~~~~~~~~l~~~~~G~l~Dr~Grr~~l 105 (452)
++++.....++....+++| +.+.+. +.+++ +.++. .+.+. ...++...+++++.|+++||+|||+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 3455666666677777777 333333 33455 66665 45432 345554557777899999999999999
Q ss_pred HHHHHHHHHHH-HHhcCccHH--------HHHHHHHHHHhHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHH
Q 012965 106 VTYCLTYILSC-ITKHSPQYK--------ILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNG 176 (452)
Q Consensus 106 ~~~~~~~~i~~-l~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ 176 (452)
..+.++++++. ++++++|++ .++++|+++|++.|..++.... ++.|+.+++++.. .......|..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~-~~~e~~p~~~rg~-----~~~~~~~g~~ 171 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAAL-LAVESAPKNKKAF-----YSSGVQVGYG 171 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHH-HHHHhCCCCCCcH-----HHHHHHHHHH
Confidence 99999999976 779999987 5889999999999999998855 8888833333321 1112233444
Q ss_pred HHHHHHHhhhhhhhcc------cCCCcchhhHHHHHHHHHHHHHHHhccccccCCCCcchhH--HHHHHHhhHHhhcchh
Q 012965 177 LVAILSGLFGNLLVDS------FSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDL--LTQFRGAAVAIASDEK 248 (452)
Q Consensus 177 ig~~~~~~l~~~l~~~------~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 248 (452)
+|..++..+...+... ..|+||.+|.+.++..++..+ .....||+++..++.++. .++..+..+.++++++
T Consensus 172 ~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~-l~~~~~es~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 250 (438)
T PRK09952 172 VGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALW-VRNGMEESAEFEQQQHEQAAAKKRIPVIEALLRHPG 250 (438)
T ss_pred HHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHH-HHHhCCCChhHHHHHhhcccccccCCHHHHHHHchH
Confidence 5555544443332211 247899999887766544332 222345543211110000 0000111223556676
Q ss_pred HHHHHHHHHhhhchhhhhhhhhccccccCCCCCchHH---HHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHH
Q 012965 249 IALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGF---IFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSV 325 (452)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 325 (452)
.+.......+.....+.....|.|.|.++..+.+... .....++...++.++.|+++||+|||+. +..+.....+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~--~~~~~~~~~~ 328 (438)
T PRK09952 251 AFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRV--YITGALIGTL 328 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHH--HHHHHHHHHH
Confidence 6665443333322223335678888887666766542 3334456677888899999999999873 3333332222
Q ss_pred HHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhh
Q 012965 326 SLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFR 393 (452)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~ 393 (452)
........... .+. .+......++.+++.+...+..+++..|.+|++.|+++.|+..
T Consensus 329 ~~~~~~~~~~~-~~~----------~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~ 385 (438)
T PRK09952 329 SAFPFFMALEA-QSI----------FWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGY 385 (438)
T ss_pred HHHHHHHHHHc-CCh----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHH
Confidence 22111111111 000 0233344555667777777888999999999999988877743
No 9
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.2e-28 Score=221.65 Aligned_cols=340 Identities=15% Similarity=0.124 Sum_probs=242.3
Q ss_pred CCccchhhHHHHHHHHHHHHhhhhh----hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHH
Q 012965 32 SSAFNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVT 107 (452)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~----~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~ 107 (452)
++.++++|++++...++.+.+.++. .-..|.+.+|.++|.+|+|.+.+..++...+.-.+.|.++||.+.|+.+..
T Consensus 20 ~~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~ 99 (448)
T COG2271 20 DKTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAF 99 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehH
Confidence 4456788888888888888877766 556679999999999999977777776666777789999999999999999
Q ss_pred HHHHHHHHH-HHhcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 012965 108 YCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSG 183 (452)
Q Consensus 108 ~~~~~~i~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~ 183 (452)
++++.++.. +++++++.+.+.+..+++|...|...|.+.. .++.+ ++||...+ .++...++|.++.+.+..
T Consensus 100 gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~-~i~~Wfsr~eRG~~~s----iWn~shNiGGal~~~~~~ 174 (448)
T COG2271 100 GLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCAR-TITHWFSRKERGTWWS----IWNTSHNIGGALAPLVAL 174 (448)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHH-HHHHHcCccccCceEE----EehhhhhcccchHHHHHH
Confidence 999999975 7799999999999999999999999999977 66666 56776666 345455555544444432
Q ss_pred hhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHhccccccCC----------CCcchh-HH-------HHHHHhhHHhhc
Q 012965 184 LFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGD----------PSESKD-LL-------TQFRGAAVAIAS 245 (452)
Q Consensus 184 ~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~-~~-------~~~~~~~~~~~~ 245 (452)
. +.+.. .++||..|+..+++.++..++.+...++++++ +|+.+. .+ ...+.-.+.+++
T Consensus 175 l--a~~~~--~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~ 250 (448)
T COG2271 175 L--AFFAF--HGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLK 250 (448)
T ss_pred H--HHHHh--ccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHc
Confidence 2 55443 34788999999988887776666444443321 011110 00 011123456899
Q ss_pred chhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccC--CCCchhHHHHHH
Q 012965 246 DEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARS--PPRVESYMQIVF 320 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~--g~~~~~~~~~~~ 320 (452)
||..|.+++...+....-++ +..|.|.|+.|..|.+. +...+.+-.++++|++++|+++||+ |||. ...+.+
T Consensus 251 Nk~iW~la~a~vfvYivR~g-i~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~--p~~~i~ 327 (448)
T COG2271 251 NKLIWLLALANVFVYVVRYG-INDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRG--PMALIF 327 (448)
T ss_pred ChHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccc--hHHHHH
Confidence 99999999999999999887 69999999988777755 5677778899999999999999996 4444 122222
Q ss_pred HHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 321 VVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
.+....++. .+.... + . ..++..+.+++.|+......-..-..+.|..|++..|++.|+....
T Consensus 328 ~~~i~~~~~-~~w~~~-~------~----~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf 390 (448)
T COG2271 328 MLLITASLV-LYWLAP-N------G----SYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLF 390 (448)
T ss_pred HHHHHHHHH-HHHcCC-C------c----cHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhH
Confidence 222222222 111111 0 1 1135555666666665555555667889999999999999887754
No 10
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.97 E-value=8.4e-28 Score=229.40 Aligned_cols=316 Identities=16% Similarity=0.177 Sum_probs=205.0
Q ss_pred hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHH
Q 012965 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G 135 (452)
.|.+|.+.+|+|+|.++.|++.+...+...+++++.|+++||+|||+++..+..+++++. ++++++|++.+++.|+++|
T Consensus 29 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~G 108 (393)
T PRK09705 29 GPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGG 108 (393)
T ss_pred chhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHH
Confidence 899999999999999999999999888888999999999999999999999999999987 7799999999999999999
Q ss_pred hHhhhhhhhhhhhhhhhc--ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHH
Q 012965 136 IATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMV 213 (452)
Q Consensus 136 ~~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~ 213 (452)
++.+...+.... ++.|+ ++|++..+ .++.+...|..+|+.+++ .+.++. .+||..+...++..++...
T Consensus 109 ig~~~~~~~~~~-~~~~~~~~~~~~~~g----~~~~~~~~g~~~g~~~~~----~l~~~~-~~w~~~~~~~~~~~~~~~~ 178 (393)
T PRK09705 109 VGIGIIQAVMPS-VIKRRFQQRTPLVMG----LWSAALMGGGGLGAAITP----WLVQHS-ETWYQTLAWWALPAVVALF 178 (393)
T ss_pred hHHHHHhhhhhH-HHHHHccccchhHHH----HHHHHHHHHHHHHHHHHH----HHHHhc-CCHHHHHHHHHHHHHHHHH
Confidence 999998887755 66766 33333333 333344444555554444 433322 2566655443333332222
Q ss_pred HHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---HHHHHHH
Q 012965 214 IILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATF 290 (452)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~ 290 (452)
......+++++ ++++++ ...++.+++++.+.......+.... +.....|.|.++++ .+.+. +......
T Consensus 179 ~~~~~~~~~~~-~~~~~~------~~~~~~l~~~~~~~l~~~~~~~~~~-~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~ 249 (393)
T PRK09705 179 AWWWQSAREVA-SSHKTT------TTPVRVVFTPRAWTLGVYFGLINGG-YASLIAWLPAFYIE-IGASAQYSGSLLALM 249 (393)
T ss_pred HHHHHhcCCCc-cccCCC------cCCcccccCHhHHHHHHHHHHHHHH-HHHHHHHHHHHHHH-cCCChhhhhHHHHHH
Confidence 22211111111 111111 0112345667776665555444444 33357788888875 45543 6677888
Q ss_pred HHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhh
Q 012965 291 MLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWP 370 (452)
Q Consensus 291 ~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 370 (452)
.++.++++++.+++.||++||+. ...+..+..+........... .......+.+++.+...|
T Consensus 250 ~i~~i~g~~~~g~l~~r~~~~~~--~~~~~~l~~~~~~~~~~~~~~----------------~~~~~~~l~g~g~g~~~~ 311 (393)
T PRK09705 250 TLGQAAGALLMPAMARHQDRRKL--LMLALVLQLVGFCGFIWLPLQ----------------LPVLWAMVCGLGLGGAFP 311 (393)
T ss_pred HHHHHHHHHHHHHHHhhccchHH--HHHHHHHHHHHHHHHHHccch----------------HHHHHHHHHHHhccchHH
Confidence 89999999999999999998873 344433333333322211111 011223456777777778
Q ss_pred HHHHHHhhcCC-cccccchhhhhhhh------hhHHHHHHHhcccc
Q 012965 371 SIMKMRSQYIP-EEARSTIMNFFRIP------LNIFVCVVLYNVDA 409 (452)
Q Consensus 371 ~~~~~~~~~~p-~~~r~~~~g~~~~~------~~~~~~~~l~~~~~ 409 (452)
.......+..+ ++++++.+|+.+.. .++.+.+++.+..+
T Consensus 312 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g 357 (393)
T PRK09705 312 LCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISG 357 (393)
T ss_pred HHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 77777777775 66788888876653 24455566666544
No 11
>PRK15075 citrate-proton symporter; Provisional
Probab=99.97 E-value=7.2e-28 Score=233.04 Aligned_cols=336 Identities=16% Similarity=0.217 Sum_probs=199.2
Q ss_pred hHHHHHHHHHHHHhhhhh----hhhHHHHHhhcCCCcchhHHHH-HH-----HHhhhhhccccccccccccCcchHHHHH
Q 012965 39 KNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLF-IA-----GFGSSMLFGTIVGSLADKQGRKRACVTY 108 (452)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~----~p~l~~i~~~~g~s~~~~g~~~-~~-----~~~~~~l~~~~~G~l~Dr~Grr~~l~~~ 108 (452)
|++.....++..+.+.+| .+..|.+.+|++.++.+.+... +. .++...+++++.|+++||+||||+++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 444566666677777776 7788899999999888765432 21 2222235567899999999999999999
Q ss_pred HHHHHHHH-HHhcCccHH--------HHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHH
Q 012965 109 CLTYILSC-ITKHSPQYK--------ILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNG 176 (452)
Q Consensus 109 ~~~~~i~~-l~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ 176 (452)
..++.++. +++++++++ .++++|+++|++.+...+.... +++|+ ++|++..+......+.+..+|..
T Consensus 93 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~-~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~ 171 (434)
T PRK15075 93 LSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSV-YLAEIATPGRKGFYTSWQSASQQVAVVFAAL 171 (434)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHH-HHHhhCCcccchHHHHHHHHHHHHHHHHHHH
Confidence 99998876 778999987 4689999999999998887755 88887 55666555444433333333333
Q ss_pred HHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHH
Q 012965 177 LVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQ 256 (452)
Q Consensus 177 ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (452)
+|..+...+..... ..++||.+|.+......+ ........||+++..++ +..++.++..+...++++.+......
T Consensus 172 ~g~~l~~~~~~~~~--~~~gWr~~f~~~~~~~~~-~~~~~~~~~e~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (434)
T PRK15075 172 LGYLLNQWLSPAQM--AEWGWRIPFLIGCLIVPF-IFLIRRSLEETEEFLAR--KHRPSMREIFRSLAANWRIVLAGMLM 246 (434)
T ss_pred HHHHHHHhCCHHHH--hccchHHHHHHHHHHHHH-HHHHHHhcCCCHHHHHh--hhccccccHHHHHHHhHHHHHHHHHH
Confidence 33333322222212 356788888775443322 22222223332110000 00001111222334455554443333
Q ss_pred HhhhchhhhhhhhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHH
Q 012965 257 SLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVT 333 (452)
Q Consensus 257 ~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 333 (452)
.+.....+.....|.|.|+++..+.+. +.......++++++.++.|+++||+|||+. ........... ..+...
T Consensus 247 ~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~--~~~~~~~~~~~-~~~~~~ 323 (434)
T PRK15075 247 VAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPV--LIAFTVLAILT-AYPALS 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH--HHHHHHHHHHH-HHHHHH
Confidence 333333344468889999887666644 344556667889999999999999998873 33322222211 111111
Q ss_pred hhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhh
Q 012965 334 SFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFR 393 (452)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~ 393 (452)
..... ++. ........+.+++.+...+..+.+..|.+|++.|+++.|+.+
T Consensus 324 ~~~~~------~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~ 373 (434)
T PRK15075 324 WLVAA------PSF----ARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAY 373 (434)
T ss_pred HHHcC------Cch----HHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHH
Confidence 11101 000 112233344556666666777788999999999999988753
No 12
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.97 E-value=6.6e-28 Score=226.65 Aligned_cols=306 Identities=14% Similarity=0.089 Sum_probs=197.9
Q ss_pred hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHHHH-hcCccHHHHHHHHHHHH
Q 012965 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCIT-KHSPQYKILMIGRILGG 135 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~l~-~~~~~~~~l~~~r~l~G 135 (452)
.|.+|.+.+|+|+|++|.|++.+..++...+++++.|+++||+|||+++..+......+.+. ...+|++.+++.|+++|
T Consensus 11 ~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G 90 (368)
T TIGR00903 11 SPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAA 90 (368)
T ss_pred HhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 78889999999999999999988888878888899999999999998876555544444433 33479999999999999
Q ss_pred hHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHH
Q 012965 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (452)
Q Consensus 136 ~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~ 212 (452)
++.+... .... .++|+ ++|++..+. ...+..+|..+++.++..+.+ .++||..|.+.+++.++..
T Consensus 91 ~g~~~~~-~~~~-~~~~~~~~~~r~~a~~~--------~~~~~~lG~~l~~~~~~~l~~--~~gWr~~f~~~~~l~~~~~ 158 (368)
T TIGR00903 91 LGQPFLL-NAFA-PAASQIREERRDLVISL--------LSFAMYLGIIFALAAGLKIYT--AGGLQLLIIPIAAVAAAGI 158 (368)
T ss_pred hHhHHHH-HHHH-HHHHHcCHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHH--ccchHHHHHHHHHHHHHHH
Confidence 9998653 3324 45665 334443332 223445566666666666654 3677888888777766665
Q ss_pred HHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch--HHHHHHH
Q 012965 213 VIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH--GFIFATF 290 (452)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~--~~~~~~~ 290 (452)
++.....||+++++++..+. ++..++.++++++|.++.......+.....+. ..+|.|.|+++ .+.+. +.....
T Consensus 159 ~~~~~~lp~~p~~~~~~~~~-~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~-~~~wlp~~L~~-~g~s~~~~~~~~l- 234 (368)
T TIGR00903 159 ILVLAALPALPFQAAEGFGF-KDAVKEFGALAGRKDLWIIGAILGFGVALFDN-LAIWLEAALRP-AGLEDIAGDAVAL- 234 (368)
T ss_pred HHHHHHcCCCCCCCCCCcch-HHHHHHHHHHHcChhHHHHHHHHHHHHHHHHH-HHHHHHHHHHH-CCCChHHHHHHHH-
Confidence 55555677755432221111 12223466788999998888877777777666 58899999975 34433 223333
Q ss_pred HHHHHHHhHHHHHHhccCCCCchhHH-HH-HHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhch
Q 012965 291 MLASMLGSSLASRLMARSPPRVESYM-QI-VFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIF 368 (452)
Q Consensus 291 ~i~~~~~~~~~g~l~dr~g~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 368 (452)
....+.+..++++||..||+.+.. .. .....++.+... ....++ ........+.+++....
T Consensus 235 --~~~~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~---~~~~~~------------~~~~~~~~l~~~~~~~~ 297 (368)
T TIGR00903 235 --AILAGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLAL---AFELNR------------LALFAFIGIAGLLMLPA 297 (368)
T ss_pred --HHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHH---HHcccc------------HHHHHHHHHHHHhhhhh
Confidence 333344445788888765432112 11 222222222121 111000 13344455566666667
Q ss_pred hhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 369 WPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 369 ~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
++..+++.+|.+|++.|+++.|+.+..
T Consensus 298 ~~~~~~~~~~~~p~~~rgt~~G~~~~~ 324 (368)
T TIGR00903 298 YAIIMDWIGKFCDKELHGKAAGAIGFT 324 (368)
T ss_pred HHHHHHHHHHhcchhhcCcccchhhHH
Confidence 777889999999999999999998874
No 13
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.97 E-value=1.4e-27 Score=234.23 Aligned_cols=332 Identities=18% Similarity=0.174 Sum_probs=200.5
Q ss_pred HHHHHHHHHHHHhhhhh----hhhHHHHHhhcCCCcch----hHH--HHHHHHhhhhhccccccccccccCcchHHHHHH
Q 012965 40 NNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGE----IGQ--LFIAGFGSSMLFGTIVGSLADKQGRKRACVTYC 109 (452)
Q Consensus 40 ~~~~~~~~~~~~~~~~~----~p~l~~i~~~~g~s~~~----~g~--~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~ 109 (452)
++.+....+..+.+++| +...|.+.++++.+.++ ++. .++..++...+++++.|+++||+|||+++..+.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 34455556666667776 45566777888644322 222 245666767788889999999999999999999
Q ss_pred HHHHHHH-HHhcCccHHH--------HHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHH
Q 012965 110 LTYILSC-ITKHSPQYKI--------LMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGL 177 (452)
Q Consensus 110 ~~~~i~~-l~~~~~~~~~--------l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~i 177 (452)
++++++. ++++++|++. ++++|+++|++.|..++.... ++.|+ ++|++..+. ...+..+|..+
T Consensus 95 ~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~-~~~e~~p~~~Rg~~~~~----~~~~~~~G~~l 169 (490)
T PRK10642 95 VIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASI-FVAEYSPDRKRGFMGSW----LDFGSIAGFVL 169 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHH-HHHHhCCCCCCcHHHHH----HHHHHHHHHHH
Confidence 9999976 7799999875 899999999999999998866 88887 445554443 33333444444
Q ss_pred HHHHHHhhhhhhhc--ccCCCcchhhHHHHHHHHHHHHHHHhccccccCCCCcchh----HH----HHHHHhhHHhhc-c
Q 012965 178 VAILSGLFGNLLVD--SFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKD----LL----TQFRGAAVAIAS-D 246 (452)
Q Consensus 178 g~~~~~~l~~~l~~--~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~----~~~~~~~~~~~~-~ 246 (452)
|..+...+...+.+ ...|+||++|++.++..++..++ ....||+++..++.++ .. ++.+.+.+++++ +
T Consensus 170 g~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (490)
T PRK10642 170 GAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYL-RHALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKH 248 (490)
T ss_pred HHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHH-HHcCCCChhHHHHHHhhhhhccccccccccCCHHHHHHHh
Confidence 44444444333221 13578999998877655544333 3355664321100000 00 000112333333 2
Q ss_pred hhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHH
Q 012965 247 EKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVS 323 (452)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~ 323 (452)
++.+.......+.....+.....|.|.++++..+.+. +.......++..++.++.|+++||+|||+. +..+....
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~--~~~~~~~~ 326 (490)
T PRK10642 249 WRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPF--VILGSVAL 326 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH--HHHHHHHH
Confidence 3333333222222223333357789998876556544 344455567788899999999999999873 33333222
Q ss_pred HHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhh
Q 012965 324 SVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNF 391 (452)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~ 391 (452)
.+........... + + .....++.++.+++.+...+....+..|.+|++.|++++|+
T Consensus 327 ~~~~~~~~~~~~~-~-------~----~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~ 382 (490)
T PRK10642 327 FVLAIPAFILINS-N-------V----IGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAA 382 (490)
T ss_pred HHHHHHHHHHHhC-C-------C----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHH
Confidence 2221111111111 0 0 02334455666666666667778888999999999998886
No 14
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.96 E-value=1.3e-27 Score=233.27 Aligned_cols=340 Identities=13% Similarity=0.077 Sum_probs=206.8
Q ss_pred hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHH
Q 012965 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G 135 (452)
.|.+|.+.+|+|+|.++.+++.+...+...++.++.|+++||+|||+++..+.++.+++. +++++++++.+++.|++.|
T Consensus 56 ~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G 135 (476)
T PLN00028 56 APLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIG 135 (476)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 788889999999999999988777777666778899999999999999999998888876 5688999999999999999
Q ss_pred hHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc---cCCCcchhhHHHHHHHH
Q 012965 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS---FSLGPVAPFDAAACFLA 209 (452)
Q Consensus 136 ~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~---~~~~~~~~f~~~~~~~~ 209 (452)
++.+...+ ... +++|+ ++|+...+.. .....+|..+++.+.+.+...+.+. ...+||..|.+.+++.+
T Consensus 136 ~~~~~~~~-~~~-~i~~~~~~~~rg~a~g~~----~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l 209 (476)
T PLN00028 136 FSLATFVS-CQY-WMSTMFNGKIVGTANGIA----AGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHI 209 (476)
T ss_pred HHHHhhHH-HHH-HHHHhcChhheeHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHH
Confidence 99886543 323 56776 3455554432 2233345555555555544433221 11468888988777766
Q ss_pred HHHHHHHhccccccCCCC--cch----hHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch
Q 012965 210 IGMVIILSSWTENYGDPS--ESK----DLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH 283 (452)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 283 (452)
+..+.... .++++++.+ +.+ ...++..+..++.++++++|...+.........+. ...+.|.|+.+..+.+.
T Consensus 210 ~~~l~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~l~~~~g~s~ 287 (476)
T PLN00028 210 IMGILVLT-LGQDLPDGNYRELKKSGTMPKDSFSKVLRYGVTNYRTWILALTYGYSFGVELT-MDNIIAEYFYDRFGLSL 287 (476)
T ss_pred HHHHHHHH-HcCcCCCCchhhHHhcCccccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHH-HHhHHHHHHHHhcCCCH
Confidence 55444432 222221110 000 00011123345567788877766554444333333 46678888766566654
Q ss_pred ---HHHHHHHHHHHHHHhHHHHHHhccCCCCch----hHHH-HHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHH
Q 012965 284 ---GFIFATFMLASMLGSSLASRLMARSPPRVE----SYMQ-IVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQL 355 (452)
Q Consensus 284 ---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (452)
+...+...++.++++++.|+++||++||+. +... ....+.++.+... .... + .+...
T Consensus 288 ~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~---~~~~--------~----~~~~~ 352 (476)
T PLN00028 288 ETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWL---GRAN--------S----LGAAI 352 (476)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHh---cccc--------h----HHHHH
Confidence 556667778899999999999999986521 1111 1111111211111 1110 0 01334
Q ss_pred HHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhhh--hHHHHHHHhcccc-CCchHHHHHHH
Q 012965 356 LGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPL--NIFVCVVLYNVDA-FPITVMFGMCS 420 (452)
Q Consensus 356 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~--~~~~~~~l~~~~~-~~~~~~~~~~~ 420 (452)
+..++.+++.+...+..+++..+..| +.++++.|+.+... +..+++.+.+..+ .++...+...+
T Consensus 353 ~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~~~~~~~y~~~f~~~~ 419 (476)
T PLN00028 353 VVMILFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFFTGSSYSTETGISLMG 419 (476)
T ss_pred HHHHHHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHHhcCCccHhhHHHHHH
Confidence 44555566655555666666777654 67899998877642 3444555544322 23444444433
No 15
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.96 E-value=1.3e-27 Score=231.14 Aligned_cols=361 Identities=12% Similarity=0.011 Sum_probs=215.7
Q ss_pred hhhHHHHHHHHHHHHhhhhh----hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHH
Q 012965 37 SFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTY 112 (452)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~----~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~ 112 (452)
++++.......+.....+++ .+.+|.+.+++|+|+.+.|++.+...+...+++++.|+++||+|||+++..+.++.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~ 98 (434)
T PRK11663 19 YWRRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIAT 98 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHH
Confidence 34445444444444444433 67788999999999999999988888888899999999999999999999999999
Q ss_pred HHHH-HHhcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 012965 113 ILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNL 188 (452)
Q Consensus 113 ~i~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~ 188 (452)
+++. ++++++|++.+++.|++.|++.|...+.... ++.|+ ++|++..+.. + .+..+|..+++.+.+.
T Consensus 99 ~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~-~~~~~~~~~~rg~~~~~~----~----~~~~~g~~~~~~~~~~ 169 (434)
T PRK11663 99 GIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAK-LLTAWYSRTERGGWWAIW----N----TAHNVGGALIPLVVGA 169 (434)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHH-HHHHhCCHHHHHHHHHHH----H----HHHHHHHHHHHHHHHH
Confidence 8876 6688999999999999999999988887755 77776 3344444322 2 2334555666666666
Q ss_pred hhcccCCCcchhhHHHHHHHHHHHHHHHhccccccCCC---------CcchhH-H--H----HHHHhh-HHhhcchhHHH
Q 012965 189 LVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDP---------SESKDL-L--T----QFRGAA-VAIASDEKIAL 251 (452)
Q Consensus 189 l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~-~--~----~~~~~~-~~~~~~~~~~~ 251 (452)
+.+. ++||..|.+.+++.++..+......+|++++. ++.++. . + +.++.. +..+++++++.
T Consensus 170 l~~~--~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (434)
T PRK11663 170 IALH--YGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWL 247 (434)
T ss_pred HHHc--ccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccccccchhccccCCChhhhHHHHHhcChHHHH
Confidence 6543 56778887776655443333332334322110 000000 0 0 011111 12456777777
Q ss_pred HHHHHHhhhchhhhhhhhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCC--CCchhHHHHHHHHHHHH
Q 012965 252 LGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSP--PRVESYMQIVFVVSSVS 326 (452)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g--~~~~~~~~~~~~~~~~~ 326 (452)
......+...... ....|.|.|+++..+.+. +...+...+++.+++++.|+++||+. +|+. ............
T Consensus 248 ~~~~~~~~~~~~~-~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~-~~~~~~~~~~~~ 325 (434)
T PRK11663 248 LSFSYVLVYVVRA-AINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGP-MNLIFAAGILLS 325 (434)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccH-HHHHHHHHHHHH
Confidence 6655444444333 357789999866566654 55666777889999999999999983 2331 111111111111
Q ss_pred HHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhhh------hHHH
Q 012965 327 LLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPL------NIFV 400 (452)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~------~~~~ 400 (452)
.......... +. .......+..+++.............|..|++.|+++.|+.+... ++..
T Consensus 326 ~~~~~~~~~~---------~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~ 392 (434)
T PRK11663 326 VGSLWLMPFA---------SY----VMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYP 392 (434)
T ss_pred HHHHHHcccc---------cH----HHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhccc
Confidence 1111111111 00 111222222333222222334566789999999999999887642 2233
Q ss_pred HHHHhccccCCchHHHHHHHHHHHH
Q 012965 401 CVVLYNVDAFPITVMFGMCSIFLLV 425 (452)
Q Consensus 401 ~~~l~~~~~~~~~~~~~~~~~~~~~ 425 (452)
.+.+.+..+ +...+...+++.++
T Consensus 393 ~g~l~~~~g--~~~~f~~~~~~~~~ 415 (434)
T PRK11663 393 LAKVLEIWH--WTGFFVVISIAAGI 415 (434)
T ss_pred HHHHHHhcc--cHHHHHHHHHHHHH
Confidence 345555533 44444444444433
No 16
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.96 E-value=1.2e-26 Score=221.29 Aligned_cols=331 Identities=15% Similarity=0.157 Sum_probs=212.4
Q ss_pred hhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHH
Q 012965 55 LQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRIL 133 (452)
Q Consensus 55 ~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l 133 (452)
...+.+|++.+|+|.++++.|...+.......+++++.|+++||+|||+++..+.++.+++. ++++++|++.+++.|++
T Consensus 38 ~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 117 (394)
T PRK10213 38 LPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRAC 117 (394)
T ss_pred HHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHH
Confidence 33667889999999999999998888888888899999999999999999999999999876 66889999999999999
Q ss_pred HHhHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHH
Q 012965 134 GGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMV 213 (452)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~ 213 (452)
+|++.+...+...+ ++.|+.+++++..... ... .+..+|..+++.+++.+.+. ++||..|.+.+++.++...
T Consensus 118 ~G~~~g~~~~~~~~-~i~~~~~~~~~~~a~~-~~~----~~~~~g~~ig~~l~~~l~~~--~gw~~~f~~~~~l~~~~~l 189 (394)
T PRK10213 118 LGLALGGFWAMSAS-LTMRLVPPRTVPKALS-VIF----GAVSIALVIAAPLGSFLGEL--IGWRNVFNAAAVMGVLCIF 189 (394)
T ss_pred HHHhhHHHHHHHHH-HHHHHcCHhHHHHHHH-HHH----HHHHHHHHHHHHHHHHHHhh--cCHHHHHHHHHHHHHHHHH
Confidence 99999998888756 7777732222222111 122 23345556666666666643 5677788877766665544
Q ss_pred HHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhc-cccccCCCCCch---HHHHHH
Q 012965 214 IILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWT-PALSPNDEEIPH---GFIFAT 289 (452)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~---~~~~~~ 289 (452)
......||+++++++. .+...+.+|+|+++.......+.....+.. ..+. |.+.+ ..|.+. +.....
T Consensus 190 ~~~~~~p~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~-~~g~s~~~~g~~~~~ 260 (394)
T PRK10213 190 WIIKSLPSLPGEPSHQ-------KQNTFRLLQRPGVMAGMIAIFMSFAGQFAF-FTYIRPVYMN-LAGFGVDGLTLVLLS 260 (394)
T ss_pred HHHHHCCCCCcccccc-------hhHHHHHhcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH-hcCCChhHHHHHHHH
Confidence 4444456543222111 112235677788776654444444433332 3444 55554 334443 566777
Q ss_pred HHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchh
Q 012965 290 FMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFW 369 (452)
Q Consensus 290 ~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 369 (452)
.+++.+++..+.+++.||.+++. +.....+.......+...... .+......++.|++.+...
T Consensus 261 ~~~~~iig~~~~~~l~~r~~~~~---l~~~~~~~~~~~~~l~~~~~~--------------~~~~~~~~~l~G~~~~~~~ 323 (394)
T PRK10213 261 FGIASFVGTSLSSFILKRSVKLA---LAGAPLVLAVSALVLTLWGSD--------------KIVATGVAIIWGLTFALVP 323 (394)
T ss_pred HHHHHHHHHHHHHHHHhccchhH---HHHHHHHHHHHHHHHHHHhhh--------------HHHHHHHHHHHHHHHHhhh
Confidence 78889999999999999954332 333322222222222111111 0345567788888998888
Q ss_pred hHHHHHHhhcCCcccccchhh----hhhh--hhhHHHHHHHhccccCCchHHHHHHHHH
Q 012965 370 PSIMKMRSQYIPEEARSTIMN----FFRI--PLNIFVCVVLYNVDAFPITVMFGMCSIF 422 (452)
Q Consensus 370 ~~~~~~~~~~~p~~~r~~~~g----~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 422 (452)
+...+.+++..|++ +++..+ ..+. ..+..+++.+.+.. +....+..+++.
T Consensus 324 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~--g~~~~~~~~~~~ 379 (394)
T PRK10213 324 VGWSTWITRSLADQ-AEKAGSIQVAVIQLANTCGAAIGGYALDNI--GLTSPLMLSGTL 379 (394)
T ss_pred HHHHHHHHHHCccc-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--ChhhHHHHHHHH
Confidence 88888899988854 333332 2222 25667777777763 344444444433
No 17
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.96 E-value=1.5e-27 Score=230.10 Aligned_cols=338 Identities=17% Similarity=0.098 Sum_probs=217.6
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHh-
Q 012965 42 YLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITK- 119 (452)
Q Consensus 42 ~~~~~~~~~~~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~- 119 (452)
++....+..++.++..+.+|...++++.++.+.|++.+...+...+++++.|+++||+|||+++..+..+.+++. ..+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~ 101 (417)
T PRK10489 22 VFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLAL 101 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHH
Confidence 334445666677777888888888999999999999999888888999999999999999999999887776653 222
Q ss_pred ----cCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCC
Q 012965 120 ----HSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSL 195 (452)
Q Consensus 120 ----~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~ 195 (452)
..++++.+++.|++.|++.+...+...+ ++.|..+++++.... .... .+..+|..+++.+++.+.+..+|
T Consensus 102 ~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~----~~~~~g~~~g~~l~g~l~~~~~~ 175 (417)
T PRK10489 102 NAFLPEPSLLAIYLLGLWDGFFGSLGVTALLA-ATPALVGRENLMQAG-AITM----LTVRLGSVISPALGGLLIAAGGV 175 (417)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhh-hhhhccCHHHHHHHH-HHHH----HHHhHHHHhHHHHHHHHHHHHhh
Confidence 2678899999999999998887777655 666653222222211 1122 23445556666666666554455
Q ss_pred CcchhhHHHHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccc
Q 012965 196 GPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALS 275 (452)
Q Consensus 196 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 275 (452)
+ +.+...++..++..+... ..|+++++++++++..++.++..+..+++|.++.......+.. .... ...+.|.|.
T Consensus 176 ~--~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~p~~~ 250 (417)
T PRK10489 176 A--WNYGLAAAGTFITLLPLL-RLPALPPPPQPREHPLRSLLAGFRFLLASPVVGGIALLGGLLT-MASA-VRVLYPALA 250 (417)
T ss_pred H--HHHHHHHHHHHHHHHHHH-hCCCCCCCCcccccchHHHHHHHHHHHcChHHHHHHHHHHHHH-HHHh-HHHhhHHHH
Confidence 4 456555555444433333 4555433322222223344445566777777655443333222 2222 466788888
Q ss_pred cCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchh
Q 012965 276 PNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGS 352 (452)
Q Consensus 276 ~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (452)
++..+.+. +...+...++.+++.++.+++.||.++++ .+..+..+..+.........+. +
T Consensus 251 ~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~---------------~ 313 (417)
T PRK10489 251 DEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGL--LMLLSTLGSFLAVGLFGLMPMW---------------I 313 (417)
T ss_pred HhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcch--HHHHHHHHHHHHHHHHHccchH---------------H
Confidence 77566544 56677778889999999999999865554 2444444433333332211111 2
Q ss_pred hHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh------hhHHHHHHHhcc
Q 012965 353 LQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNV 407 (452)
Q Consensus 353 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~ 407 (452)
...+..++.+++.+...+...++.+|..|++.|++++|+.+.. .+..+.+.+.+.
T Consensus 314 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~ 374 (417)
T PRK10489 314 LAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAM 374 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHH
Confidence 4456667777777777778889999999999999999887653 344555666665
No 18
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.96 E-value=9.4e-27 Score=223.28 Aligned_cols=348 Identities=16% Similarity=0.099 Sum_probs=210.2
Q ss_pred HHHHHHHHHHhhhhhhhhHHH-HHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHh
Q 012965 42 YLLVYSLMMAGDWLQGPYVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITK 119 (452)
Q Consensus 42 ~~~~~~~~~~~~~~~~p~l~~-i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~ 119 (452)
.....++..++.++..|++|. +.+++|.|+.+.|++.+...+...+.+++.|+++||+||||++..+.++.+++. .+.
T Consensus 20 l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~ 99 (399)
T PRK05122 20 IVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYL 99 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHH
Confidence 344445555677777888886 568899999999999999999889999999999999999999999998887653 332
Q ss_pred ---cCc-----cHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 012965 120 ---HSP-----QYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNL 188 (452)
Q Consensus 120 ---~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~ 188 (452)
+.+ +++.+++.|+++|++.+...+.... ++.|. ++|++..+.. +.. ...|..+++.+++.
T Consensus 100 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~----~~~----~~~g~~~g~~l~~~ 170 (399)
T PRK05122 100 LAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSIL-WGIGRVGALHTGRVISWN----GIA----TYGALAIGAPLGVL 170 (399)
T ss_pred HhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHH-HHHhhcChhhhccchhhh----hhh----hhHHHHHHHHHHHH
Confidence 222 5678899999999999998888755 55554 4555544432 222 33444555555555
Q ss_pred hhcccCCCcchhhHHHHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhh
Q 012965 189 LVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVF 268 (452)
Q Consensus 189 l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (452)
+.+. ++|+..+.+..++.++..... ...|++++++++ + ++.++..+.. +.......+.... +....
T Consensus 171 l~~~--~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~---~~~~~~~~~~------~~~~~~~~~~~~~-~~~~~ 236 (399)
T PRK05122 171 LYHW--GGLAGLGLLIMLLALLGLLLA-RPRPAVPPVKGE-R---LPFRRVLGRV------WPYGMGLALASIG-FGTIA 236 (399)
T ss_pred HHHc--ccHHHHHHHHHHHHHHHHHHH-hcCCCCCCCCcc-c---hhHHHHHHHH------HHHHHHHHHHHHH-HHHHH
Confidence 5543 456666666555544333322 223332221111 1 1111111111 1111111111111 22234
Q ss_pred hhccccccCCCCC-chHHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCc
Q 012965 269 LWTPALSPNDEEI-PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGI 347 (452)
Q Consensus 269 ~~~p~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (452)
.+.|.+.++. +. +.+.......++.++++++.+++.||+++|+ .+..+..+..+.........+.
T Consensus 237 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~----------- 302 (399)
T PRK05122 237 TFITLYYAAR-GWDGAALALTLFGVAFVGARLLFGNLINRLGGLR--VAIVSLLVEILGLLLLWLAPSP----------- 302 (399)
T ss_pred HHHHHHHHHc-ccccchHHHHHHHHHHHHHHHHHHHHHHHhccHH--HHHHHHHHHHHHHHHHHHhccH-----------
Confidence 4556555432 22 2355666777888999999999999999876 2434444434333333222111
Q ss_pred ccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhhh------hHHHHHHHhccccCCchHHHHHHHH
Q 012965 348 SFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPL------NIFVCVVLYNVDAFPITVMFGMCSI 421 (452)
Q Consensus 348 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~------~~~~~~~l~~~~~~~~~~~~~~~~~ 421 (452)
+...+..++.|++.+..++.......|..|+++|+++.|+.+... +..+.+.+.+. .++...+...++
T Consensus 303 ----~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~--~g~~~~~~~~~~ 376 (399)
T PRK05122 303 ----WMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASW--FGYPSIFLAAAL 376 (399)
T ss_pred ----HHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCHHHHHHHHHH
Confidence 244566778888888888888888889999999999998877642 22333444444 345455555544
Q ss_pred HHHHHHHHHHh
Q 012965 422 FLLVASVLQRR 432 (452)
Q Consensus 422 ~~~~~~~~~~~ 432 (452)
+.+++......
T Consensus 377 ~~~~~~~~~~~ 387 (399)
T PRK05122 377 AALLGLALTWL 387 (399)
T ss_pred HHHHHHHHHHH
Confidence 44444443333
No 19
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.96 E-value=4.9e-27 Score=225.28 Aligned_cols=332 Identities=15% Similarity=0.124 Sum_probs=212.6
Q ss_pred hhhHHHHHHHHHHHHhhhhh----hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHH
Q 012965 37 SFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTY 112 (452)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~----~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~ 112 (452)
|.+|+.....++....+.++ +...|.+.+|+|+|..++|++.+..++...+++++.|+++||+|||+++..+.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLW 83 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHH
Confidence 44566666666666666666 56667888999999999999999888888899999999999999999999999999
Q ss_pred HHHH-HHhcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 012965 113 ILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNL 188 (452)
Q Consensus 113 ~i~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~ 188 (452)
+++. ++++++|++.+++.|+++|++.+...+.... ++.|+ ++|++..+. ++ .+..+|..+++.+++.
T Consensus 84 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~-~~~~~~~~~~rg~~~~~----~~----~~~~~g~~~~~~~~~~ 154 (412)
T TIGR02332 84 GIASTATMFATGPESLYLLRILVGIAEAGFLPGILL-YLTFWFPAYFRARANAL----FM----IAMPVTMALGLILSGY 154 (412)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHH-HHHHHcCHHHHHHHHHH----HH----HHHHHHHHHHHHHHHH
Confidence 9876 6789999999999999999999999887755 77887 334554442 22 2334555555555555
Q ss_pred hhcc----cCCCcchhhHHHHHHHHHHHHHHHhccccccCCCC---c-chhHH-HHH---------------------HH
Q 012965 189 LVDS----FSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPS---E-SKDLL-TQF---------------------RG 238 (452)
Q Consensus 189 l~~~----~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~-~~~---------------------~~ 238 (452)
+.+. ..++||..|.+.++..++...+.....||++++.+ + +++.. ++. ++
T Consensus 155 l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (412)
T TIGR02332 155 ILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRS 234 (412)
T ss_pred HHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHH
Confidence 5432 23678888988777766555555445566543211 1 00000 000 01
Q ss_pred hhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccC-CCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchh
Q 012965 239 AAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN-DEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVES 314 (452)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~ 314 (452)
..++++ ++.++.......+.....+. ...|.|.++++ +.+.+. +.......++.+++.++.++++||+++|+.
T Consensus 235 ~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~- 311 (412)
T TIGR02332 235 MLREIF-TPAIMLYTLAYFCLTNTLSA-INIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKH- 311 (412)
T ss_pred HHHHhc-ChHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHH-
Confidence 112222 35555555444444444343 57899999976 234332 566677788899999999999999987762
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhh
Q 012965 315 YMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (452)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (452)
..........+..... . ... . . ........+.+++.....+..+....|.+|++.|++++|+.+.
T Consensus 312 ~~~~~~~~~~~~~~~~-~-~~~-~---------~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~ 376 (412)
T TIGR02332 312 HTALPYLFAAAGWLLA-S-ATD-H---------N---LIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINA 376 (412)
T ss_pred HHHHHHHHHHHHHHHH-H-hcC-C---------H---HHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHH
Confidence 1222222222222111 1 111 0 0 1112222233333333334455666788999999999998887
Q ss_pred h
Q 012965 395 P 395 (452)
Q Consensus 395 ~ 395 (452)
.
T Consensus 377 ~ 377 (412)
T TIGR02332 377 T 377 (412)
T ss_pred h
Confidence 5
No 20
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.96 E-value=2e-27 Score=237.82 Aligned_cols=178 Identities=18% Similarity=0.188 Sum_probs=128.9
Q ss_pred cchhhHHHHHHHHHHHHhhhhh----hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHH
Q 012965 35 FNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCL 110 (452)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~----~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~ 110 (452)
..+++|.++.++.+..+.++++ ++.+|.+.+++|++..+.+++.+..+++..++++++|+++||+|||++++++++
T Consensus 161 ~~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~li 240 (742)
T TIGR01299 161 HGRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLS 240 (742)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 4566777777777777766664 677888889999999999999888888888888999999999999999999999
Q ss_pred HHHHHH-HHhcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhcc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 012965 111 TYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHN---KRGFEQQWLSITFSKAIFLGNGLVAILSGLFG 186 (452)
Q Consensus 111 ~~~i~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~~---~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~ 186 (452)
+.+++. +++++++++.++++|++.|++.+...+.... ++.|.. +|+...+...... . +|.++++.++
T Consensus 241 l~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~-~isE~~p~~~Rg~~~g~~~~~~----~----iG~ila~~la 311 (742)
T TIGR01299 241 VNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFS-YFAEFLAQEKRGEHLSWLCMFW----M----IGGIYAAAMA 311 (742)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCHHHHHHHHHHHHHHH----H----HHHHHHHHHH
Confidence 888875 6688999999999999999999999888755 888873 3444444333322 2 3333333333
Q ss_pred hhhhcccC-----------CCcchhhHHHHHHHHHHHHHHHhccccc
Q 012965 187 NLLVDSFS-----------LGPVAPFDAAACFLAIGMVIILSSWTEN 222 (452)
Q Consensus 187 ~~l~~~~~-----------~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 222 (452)
..+....+ ++||+.+++.++..++..+. .+..||.
T Consensus 312 ~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~-~~~lPES 357 (742)
T TIGR01299 312 WAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGA-LTFMPES 357 (742)
T ss_pred HHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHH-HHHcCCC
Confidence 33322222 35788777766655544333 3356664
No 21
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.96 E-value=2.9e-27 Score=227.43 Aligned_cols=348 Identities=14% Similarity=0.094 Sum_probs=217.7
Q ss_pred cchhhHHHHHHHHHHHHhhhhh----hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHH
Q 012965 35 FNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCL 110 (452)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~----~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~ 110 (452)
.++.+|+.+..+.+....+.++ .+..|.+.+++|.|+.+.|++.+...+...+++++.|+++||+|||+++..+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~ 85 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIV 85 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 3445666666666666666555 778888999999999999999999998888999999999999999999999999
Q ss_pred HHHHHH-HHhcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 012965 111 TYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFG 186 (452)
Q Consensus 111 ~~~i~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~ 186 (452)
+.+++. +++++++++.+++.|++.|++.+...+...+ ++.|. ++|++..+.. . .+..+|..+++.++
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~----~----~~~~~g~~~~~~l~ 156 (405)
T TIGR00891 86 LFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAA-YVIESWPKHLRNKASGLL----I----SGYAVGAVVAAQVY 156 (405)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHH-HHHHhCChhhhhHHHHHH----H----HHHHHHHHHHHHHH
Confidence 988876 6688999999999999999999999888766 77776 3444444322 2 23345555555555
Q ss_pred hhhhcccCCCcchhhHHHHHHHHHHHHHHHhccccccCCCCcch---hHHHHHHH---h---hHH--------h----hc
Q 012965 187 NLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESK---DLLTQFRG---A---AVA--------I----AS 245 (452)
Q Consensus 187 ~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---~---~~~--------~----~~ 245 (452)
+.+.+..+.+||..|.+.++..++..+ .....||+++.+++++ +..+..++ . .+. . .+
T Consensus 157 ~~l~~~~~~~w~~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (405)
T TIGR00891 157 SLVVPVWGDGWRALFFISILPIIFALW-LRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGK 235 (405)
T ss_pred HHHHHhcCccHHHHHHHHHHHHHHHHH-HHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhh
Confidence 555544444578888776555444433 3335566432111100 00000000 0 000 0 00
Q ss_pred chh-HHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHH
Q 012965 246 DEK-IALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFV 321 (452)
Q Consensus 246 ~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~ 321 (452)
++. +........+...... ....+.|.+..+..+.+. +.......++.+++.++.+++.||++||+. +..+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~--~~~~~~ 312 (405)
T TIGR00891 236 RWPTFVYLVVLVLFANLYSH-PIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKA--YVCSLL 312 (405)
T ss_pred hhHHHHHHHHHHHHHHHHHh-hhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhh--hHHHHH
Confidence 011 1111112222222222 245677877765555544 566677788899999999999999998873 333333
Q ss_pred HHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh------
Q 012965 322 VSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------ 395 (452)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------ 395 (452)
............... .+...+...+.++..+...+....+.+|.+|+++|++++|+.+..
T Consensus 313 ~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ 378 (405)
T TIGR00891 313 AGQLLIIPVFAIGAN--------------VAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGA 378 (405)
T ss_pred HHHHHHHHHHHhCCc--------------hHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHH
Confidence 222222211111111 023334445555666666777888999999999999999887653
Q ss_pred hhHHHHHHHhcccc
Q 012965 396 LNIFVCVVLYNVDA 409 (452)
Q Consensus 396 ~~~~~~~~l~~~~~ 409 (452)
.++.+++.+.+..+
T Consensus 379 ~g~~~~g~l~~~~g 392 (405)
T TIGR00891 379 LAPIIGALLAQRLD 392 (405)
T ss_pred HHHHHHHHHHHhcc
Confidence 33355556666544
No 22
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.96 E-value=1.2e-27 Score=227.79 Aligned_cols=338 Identities=14% Similarity=0.052 Sum_probs=215.7
Q ss_pred hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHH
Q 012965 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G 135 (452)
.++.|.+.+|+|+|.+++|++.+...+...+++++.|+++||+|||+++..+.++.+++. ++++++|++.+++.|++.|
T Consensus 23 ~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 102 (377)
T TIGR00890 23 TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLAS 102 (377)
T ss_pred hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 788899999999999999999999999888999999999999999999999999998876 6789999999999999999
Q ss_pred hHhhhhhhhhhhhhhhhc--ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHH
Q 012965 136 IATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMV 213 (452)
Q Consensus 136 ~~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~ 213 (452)
++.+...+.... .+.|+ ++|++..+. ...+..+|..+++.+.+.+.+ .++||..|.+.+++.++...
T Consensus 103 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--------~~~~~~~g~~~~~~~~~~~~~--~~~~~~~f~~~~~~~~~~~~ 171 (377)
T TIGR00890 103 AGVGIAYGIALN-TAVKWFPDKRGLASGI--------IIGGYGLGSFILSPLITSVIN--LEGVPAAFIYMGIIFLLVIV 171 (377)
T ss_pred HHHHHHHHhHHH-HHHHHcCcccHHHHHH--------HHHhcchhHhHHHHHHHHHHh--cccHHHHHHHHHHHHHHHHH
Confidence 999988777655 56664 444443332 223344555444444444443 34677888887776665544
Q ss_pred HHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---HHHHHHH
Q 012965 214 IILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATF 290 (452)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~ 290 (452)
......++++++++++++..++.++..++..++++.+............... ...+.+.+.++ .+.+. +......
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~ 249 (377)
T TIGR00890 172 LGAFLIGYPPGQLIKTNIEVSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLL-LIGLYKPYGQS-LGLSDGFLVLAVSIS 249 (377)
T ss_pred HHHHheecCchhccccCcccchhhhhHHHHHcCccHHHHHHHHHHHhHHHHH-HHHHHHHHHHH-cCCCHHHHHHHHHHH
Confidence 4433333222111111111111122344667777777655444433333222 23344445433 33333 5666777
Q ss_pred HHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhh
Q 012965 291 MLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWP 370 (452)
Q Consensus 291 ~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 370 (452)
.++.++++++.+++.||++||+. +..+.....+........... . .........+.+++.+...+
T Consensus 250 ~~~~~~~~~~~g~l~dr~g~~~~--~~~~~~~~~~~~~~~~~~~~~-----------~--~~~~~~~~~~~g~~~g~~~~ 314 (377)
T TIGR00890 250 SIFNGGGRPFLGALSDKIGRQKT--MSIVFGISAVGMAAMLFIPML-----------N--DVLFLATVALVFFTWGGTIS 314 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhh--hhHHHHHHHHHHHHHHHcccc-----------h--hHHHHHHHHHHHHHhccchh
Confidence 88899999999999999998873 444444444433332221111 0 01233445566777777777
Q ss_pred HHHHHHhhcCCcccccchhhhhhhhh------hHHHHHHHhccccCCchHHHHHHHHHHH
Q 012965 371 SIMKMRSQYIPEEARSTIMNFFRIPL------NIFVCVVLYNVDAFPITVMFGMCSIFLL 424 (452)
Q Consensus 371 ~~~~~~~~~~p~~~r~~~~g~~~~~~------~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 424 (452)
....+..|.+|+++|+++.|+.+... +..+.+.+.+.. ++...+..++++.+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~--g~~~~f~~~~~~~~ 372 (377)
T TIGR00890 315 LFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEI--GFEYTFIVTGAFAL 372 (377)
T ss_pred ccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhh--chhhHHHHHHHHHH
Confidence 77889999999999999999887642 223334444443 34444444444433
No 23
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.96 E-value=2.3e-26 Score=221.42 Aligned_cols=356 Identities=18% Similarity=0.147 Sum_probs=217.6
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHhhcCCCcch-----hHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH
Q 012965 42 YLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGE-----IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC 116 (452)
Q Consensus 42 ~~~~~~~~~~~~~~~~p~l~~i~~~~g~s~~~-----~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ 116 (452)
.....++...+.....|++|.+.+++|.+..+ .|.+.+...+...+.+++.|+++||+|||+++..+..+.+++.
T Consensus 19 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 98 (408)
T PRK09874 19 AWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVM 98 (408)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHH
Confidence 33444445556666689999999999998765 3777888888888999999999999999999999988888875
Q ss_pred -HHhcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q 012965 117 -ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS 192 (452)
Q Consensus 117 -l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~ 192 (452)
++.+.++++.+++.|++.|++.+. .+.... ++.|. ++|++..+. .. .+..+|..+++.+++.+.+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~----~~----~~~~~g~~~~~~~~~~l~~~ 168 (408)
T PRK09874 99 VLMGLAQNIWQFLILRALLGLLGGF-VPNANA-LIATQVPRNKSGWALGT----LS----TGGVSGALLGPLAGGLLADS 168 (408)
T ss_pred HHHHHHhhHHHHHHHHHHHHHhhhh-HHhHHH-HHHHhcCHhhhhHHHHH----HH----HHHHHHHHHHHHHHHHHHHH
Confidence 567889999999999999998654 455544 55554 334443332 22 23345555556666665543
Q ss_pred cCCCcchhhHHHHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhcc
Q 012965 193 FSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTP 272 (452)
Q Consensus 193 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 272 (452)
++|+..|.+.+++.++..+......||++++++++++ .+. ++..+..++++.+.......+...........+.|
T Consensus 169 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (408)
T PRK09874 169 --YGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKEM--LHM-REVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILT 243 (408)
T ss_pred --hCHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhh--hHH-HHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567778777766655554444344543322111111 111 12223456666554322222221111222344455
Q ss_pred ccccCCCCC-c-----hHHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCC
Q 012965 273 ALSPNDEEI-P-----HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGG 346 (452)
Q Consensus 273 ~~~~~~~~~-~-----~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (452)
.|..+..+. + .+.......++.+++.+..+++.||++||+. +..+.....+...........
T Consensus 244 ~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~--~~~~~~~~~~~~~~~~~~~~~---------- 311 (408)
T PRK09874 244 LYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKI--LITALIFSVLLLIPMSFVQTP---------- 311 (408)
T ss_pred HHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchh--HHHHHHHHHHHHHHHHHhccH----------
Confidence 555432221 1 1334455567788888999999999998873 333333333323222211111
Q ss_pred cccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh------hhHHHHHHHhccccCCchHHHHHHH
Q 012965 347 ISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGMCS 420 (452)
Q Consensus 347 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~ 420 (452)
+...+...+.|++.+...|...+...+..|+++|++.++..+.. .++.+++.+.+.. ++...+...+
T Consensus 312 -----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~--g~~~~f~~~~ 384 (408)
T PRK09874 312 -----LQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANY--GFRAVFLVTA 384 (408)
T ss_pred -----HHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhc--chhHHHHHHH
Confidence 34556667788888888898999999999999999998876553 3445556665553 4555555555
Q ss_pred HHHHHHHHHHH
Q 012965 421 IFLLVASVLQR 431 (452)
Q Consensus 421 ~~~~~~~~~~~ 431 (452)
++.++..+...
T Consensus 385 ~~~l~~~~~~~ 395 (408)
T PRK09874 385 GVVLFNAVYSW 395 (408)
T ss_pred HHHHHHHHHHH
Confidence 55544444433
No 24
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.96 E-value=1.9e-26 Score=221.54 Aligned_cols=317 Identities=15% Similarity=0.191 Sum_probs=207.8
Q ss_pred hhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHH
Q 012965 56 QGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILG 134 (452)
Q Consensus 56 ~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~ 134 (452)
..|.+|.+.+|+|.|+.+.++..+...+...+..++.|+++||+||||++..+..+.+++. ++.++++++.+++.|+++
T Consensus 32 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 111 (406)
T PRK15402 32 IQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQ 111 (406)
T ss_pred HhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 3778888999999999999988888888788888999999999999999999998888876 668889999999999999
Q ss_pred HhHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHH
Q 012965 135 GIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVI 214 (452)
Q Consensus 135 G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~ 214 (452)
|++.+...+...+ .+.|..++..+...... .. .+..++..++|.+++.+.++. +||..|++.++..++....
T Consensus 112 G~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~-~~----~~~~~~~~~g~~i~~~l~~~~--~w~~~~~~~~~~~~~~~~~ 183 (406)
T PRK15402 112 GIGLCFIGAVGYA-AIQESFEEADAIKITAL-MA----NVALLAPLLGPLVGAALIHVL--PWRGMFVLFAALAALSFFG 183 (406)
T ss_pred HhHhhhHHHHHHH-HHHHHhChhHHHHHHHH-HH----HHHHHHHHHHHHHHHHHHHcc--CccHHHHHHHHHHHHHHHH
Confidence 9999887776655 66665222222221111 11 123345566666666666544 5667777766666655554
Q ss_pred HHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---HHHHHHHH
Q 012965 215 ILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFM 291 (452)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~ 291 (452)
.....||++++++++. ..++..++.++.+++|+++.......+....... ...+.|.+.++..+.++ +.......
T Consensus 184 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~g~~~~~~g~~~~~~~ 261 (406)
T PRK15402 184 LWRAMPETAGRVGEKL-SLKELGRDYKLVLKNRRFVAGALALGLVSLPLLA-WIALSPVILISGEQLSSYEYGLLQVPVF 261 (406)
T ss_pred HHHhCCCCCccccccc-cHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHH-HHHHhHHHHHHHhCCCHHHHHHHHHHHH
Confidence 4445666543322211 1233445566788888888776655544433332 34556777665555544 44445555
Q ss_pred HHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhH
Q 012965 292 LASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPS 371 (452)
Q Consensus 292 i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 371 (452)
++..++.++.+++.||+++|+ .+..+.....++............ .+ .+.......+.+++.+...+.
T Consensus 262 ~~~~~g~~~~g~l~~r~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~------~~----~~~~~~~~~~~g~g~~~~~~~ 329 (406)
T PRK15402 262 GALIAGNLTLARLTSRRPLRS--LIRMGLWPMVAGLLLAALATVISS------HA----YLWLTAGLSLYAFGIGLANAG 329 (406)
T ss_pred HHHHHHHHHHHHHHHhcCHHH--HHHHHHHHHHHHHHHHHHHHHccc------cc----HHHHHHHHHHHHHHHHHHhhh
Confidence 678889999999999998876 244444443333333332221100 00 123456677788888877776
Q ss_pred HHHHHhhcCCcccccchhhhhhhh
Q 012965 372 IMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 372 ~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
.+...... ++++|++..+..++.
T Consensus 330 ~~~~~~~~-~~~~~g~~~~~~~~~ 352 (406)
T PRK15402 330 LYRLTLFS-SDVSKGTVSAAMGML 352 (406)
T ss_pred HHHHHhhh-ccccccHHHHHHHHH
Confidence 66655444 447789888877664
No 25
>PRK10133 L-fucose transporter; Provisional
Probab=99.96 E-value=2e-26 Score=222.16 Aligned_cols=315 Identities=12% Similarity=0.141 Sum_probs=202.6
Q ss_pred hhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HH---hcCccHHHH
Q 012965 52 GDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT---KHSPQYKIL 127 (452)
Q Consensus 52 ~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~---~~~~~~~~l 127 (452)
......+.+|.+.+++|+|+.+.|+..+...+...+.+++.|+++||+||||++..+..+++++. ++ ..+++++.+
T Consensus 41 ~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~l 120 (438)
T PRK10133 41 ANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLF 120 (438)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 44444888899999999999999999888888888999999999999999999999999999976 43 568999999
Q ss_pred HHHHHHHHhHhhhhhhhhhhhhhhhcccc---cchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhh-------------hc
Q 012965 128 MIGRILGGIATSLLFSAFESWLVAEHNKR---GFEQQWLSITFSKAIFLGNGLVAILSGLFGNLL-------------VD 191 (452)
Q Consensus 128 ~~~r~l~G~~~~~~~~~~~~~~i~e~~~r---~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l-------------~~ 191 (452)
+++|+++|++.+...+...+ ++.|..++ ++..+.. +....+|..+|+.+++.+.... .+
T Consensus 121 l~~r~l~G~g~g~~~~~~~~-~v~~~~~~~~~~~~~s~~----~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~ 195 (438)
T PRK10133 121 LVGLFIIAAGLGCLETAANP-FVTVLGPESSGHFRLNLA----QTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPE 195 (438)
T ss_pred HHHHHHHHHHHHHHHhhHHH-HHHHhCChhhHHHHHHHH----HHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChh
Confidence 99999999999999888866 66665222 2223333 3333344444444443322100 00
Q ss_pred -ccCC------CcchhhHHHH-HHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchh
Q 012965 192 -SFSL------GPVAPFDAAA-CFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSM 263 (452)
Q Consensus 192 -~~~~------~~~~~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (452)
..+| +||.+|.... +..++..+......||.++++++ ++..++..+..++++++|+++...+...+.....
T Consensus 196 ~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~ 274 (438)
T PRK10133 196 QLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHS-DAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQ 274 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc-cccccchhhhHHHHHhCchHHHHHHHHHHHHHHH
Confidence 0123 5666775433 33333333333344543221111 1111122234456778888776554444444443
Q ss_pred hhhhhhhccccc-cCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCC
Q 012965 264 YTFVFLWTPALS-PNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAP 339 (452)
Q Consensus 264 ~~~~~~~~p~~~-~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (452)
+. ...|.+.|+ ++..+.++ +..+....++.++++++.+++.||+++|+. +..+..+....+....... .
T Consensus 275 ~~-~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~--l~~~~~~~~~~~~~~~~~~-~--- 347 (438)
T PRK10133 275 TA-CWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKV--LAAYALIAMALCLISAFAG-G--- 347 (438)
T ss_pred HH-HHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH--HHHHHHHHHHHHHHHHHcC-C---
Confidence 33 355677764 55566655 567788889999999999999999998872 4444333333332222111 1
Q ss_pred CCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhh
Q 012965 340 SNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFF 392 (452)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~ 392 (452)
......+.+.+++.+..+|..++...|..|++ .+++.++.
T Consensus 348 ------------~~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l~ 387 (438)
T PRK10133 348 ------------HVGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFI 387 (438)
T ss_pred ------------hHHHHHHHHHHHHHHHHHHHHHHHHHcccchh-hccchhHH
Confidence 12355677889999999999999999998875 44444443
No 26
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.96 E-value=9.9e-27 Score=220.42 Aligned_cols=327 Identities=15% Similarity=0.106 Sum_probs=223.4
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhc
Q 012965 42 YLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKH 120 (452)
Q Consensus 42 ~~~~~~~~~~~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~ 120 (452)
++...++..+++....+.+|...+|++.++.++|++.+...+...+.+++.|+++||+||||++..+..+.+++. +..+
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 83 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPF 83 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHH
Confidence 344455566667777788888888999999999999999988888999999999999999999999988887754 4455
Q ss_pred Cc-----cHHHHHHHHHHHHhHhhhhhhhhhhhhhhhcc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q 012965 121 SP-----QYKILMIGRILGGIATSLLFSAFESWLVAEHN---KRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS 192 (452)
Q Consensus 121 ~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~~---~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~ 192 (452)
.+ +++.+++.|++.|++.+...+...+ ++.|.. +|++..+. .+. +..+|..+++.+++.+.+.
T Consensus 84 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~----~~~~g~~~g~~l~~~l~~~ 154 (365)
T TIGR00900 84 VALLGGLNIWQVYVLAGILAIAQAFFTPAYQA-MLPDLVPEEQLTQANSL----SQA----VRSLFYIVGPGIGGLMYAT 154 (365)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCHHHHHHHHhH----HHH----HHHHHHHHHHHHHHHHHHH
Confidence 55 9999999999999999999888866 777773 33443332 222 3345555555666665543
Q ss_pred cCCCcchhhHHHHHHHHHHHHHHHh-ccccccCCCCcc-h-hHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhh
Q 012965 193 FSLGPVAPFDAAACFLAIGMVIILS-SWTENYGDPSES-K-DLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFL 269 (452)
Q Consensus 193 ~~~~~~~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (452)
++|+..|...++..++....... ..||++++++++ + +..++.++..++.+|+|+++.......+...........
T Consensus 155 --~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (365)
T TIGR00900 155 --LGIKWAIWVDAVGFAISALLIVSVRIPELAASEIQALSNAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVA 232 (365)
T ss_pred --hhHHHHHHHHHHHHHHHHHHHHhcccccCCCccccccchhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667777766555544333332 233332212111 1 222334455667788888877666555555444433336
Q ss_pred hccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCC
Q 012965 270 WTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGG 346 (452)
Q Consensus 270 ~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (452)
+.|.+.++..+.+. +.......++.+++.++.+++.||.+||+. +..+....++...........
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---------- 300 (365)
T TIGR00900 233 LFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMAL--MTGAIFVIGLAILVVGLTPPN---------- 300 (365)
T ss_pred HhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHH--HHHHHHHHHHHHHHHHhhchh----------
Confidence 77887776445443 666777788899999999999999988762 333333333333332222110
Q ss_pred cccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 347 ISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 347 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
.+...+..++.+++.+...+...++..|..|+++|+++.|+.+..
T Consensus 301 ----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 345 (365)
T TIGR00900 301 ----FPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSL 345 (365)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 135567778889999988899999999999999999999987764
No 27
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.96 E-value=1.5e-26 Score=223.89 Aligned_cols=343 Identities=16% Similarity=0.124 Sum_probs=211.2
Q ss_pred hhhHHHHHHHHHHHHhhhhh----hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHH
Q 012965 37 SFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTY 112 (452)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~----~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~ 112 (452)
+.+++.+..+.+....++++ .+..|.+.+++|+|+.+.+.+.+...+...+++++.|+++||+|||+++..+.++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~ 93 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 45555555555665555555 77778888999999999999888888888888999999999999999999999999
Q ss_pred HHHH-HHhcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 012965 113 ILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNL 188 (452)
Q Consensus 113 ~i~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~ 188 (452)
+++. +++++++++.++++|+++|++.+...+.... ++.|. ++|++..+. ...+..+|..+++.+...
T Consensus 94 ~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~-~~~~~~~~~~r~~~~~~--------~~~~~~lg~~~~~~l~~~ 164 (426)
T PRK12307 94 SVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACAST-YAVESWPKHLKSKASAF--------LVSGFGIGNIIAAYFMPS 164 (426)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHH-HHHHhCCHhHhhHhhhH--------HHHHHhHHHHHHHHHHHH
Confidence 9976 6688999999999999999999988888756 77776 334443332 223445566666666665
Q ss_pred hhcccCCCcchhhHHHHHHHHHHHHHHHhccccccCCCC-----cc---hhHHHHHHHhhHHhhcchhHHHHHHHHH--h
Q 012965 189 LVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPS-----ES---KDLLTQFRGAAVAIASDEKIALLGAIQS--L 258 (452)
Q Consensus 189 l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 258 (452)
+.+. ++||..|.+.....++.. ......||+++.++ +. ++..+..+...++.+++++++....... +
T Consensus 165 l~~~--~~w~~~f~i~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (426)
T PRK12307 165 FAEA--YGWRAAFFVGLLPVLLVI-YIRARAPESKEWEEAKLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLF 241 (426)
T ss_pred Hccc--CCHHHHHHHHHHHHHHHH-HHHHHCCCChHHHHhhhhccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHH
Confidence 5543 466777776543333322 22223344321100 00 0000111123456677766654322211 1
Q ss_pred hhchhhhhhhhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhh
Q 012965 259 FEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSF 335 (452)
Q Consensus 259 ~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (452)
...........+.|.+.++. +.+. +.......++.++++++.+++.||++||+. ...+.....+..........
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~--~~~~~~~~~~~~~~~~~~~~ 318 (426)
T PRK12307 242 SIFGANWPIFGLLPTYLAGE-GFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKT--FSIGLLMSFLFIFPLFRIPQ 318 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH--HHHHHHHHHHHHHHHHHHcc
Confidence 11111112356778777643 4433 555667778899999999999999998872 33333333332222211111
Q ss_pred hcCCCCcCCCCcccchhhHHHHHHHHHHHh--hchhhHHHHHHhhcCCcccccchhhhhhhh------hhHHHHHHHhcc
Q 012965 336 LVAPSNVKSGGISFSGSLQLLGFCTFEACV--GIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNV 407 (452)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~ 407 (452)
. .......++++.+. ....+..+.++.|.+|++.|++++|+.+.. .++.+.+++.+.
T Consensus 319 ~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~ 383 (426)
T PRK12307 319 D---------------NYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGIT 383 (426)
T ss_pred c---------------cHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHc
Confidence 1 01122223333322 223456677889999999999999876653 333455555555
Q ss_pred cc
Q 012965 408 DA 409 (452)
Q Consensus 408 ~~ 409 (452)
.+
T Consensus 384 ~g 385 (426)
T PRK12307 384 MG 385 (426)
T ss_pred cc
Confidence 43
No 28
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.96 E-value=2.8e-26 Score=218.43 Aligned_cols=327 Identities=14% Similarity=0.146 Sum_probs=210.7
Q ss_pred hhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHH
Q 012965 52 GDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIG 130 (452)
Q Consensus 52 ~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~ 130 (452)
+..+..|.+|.+.+++|+|+.+.+.+.+...+...+++++.|+++||+|||+++..+.++.+++. ++.++++++.+++.
T Consensus 6 ~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 85 (377)
T PRK11102 6 AIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYM 85 (377)
T ss_pred HHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 33444788999999999999999999888888888889999999999999999999999998876 66888999999999
Q ss_pred HHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHH
Q 012965 131 RILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACF 207 (452)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~ 207 (452)
|++.|++.+...+...+ ++.|. ++|++..+. .. .+..+|..+++.+++.+.+. ++|+..|.+.+.+
T Consensus 86 ~~l~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~----~~~~~g~~~~~~~~~~l~~~--~~~~~~~~~~~~~ 154 (377)
T PRK11102 86 RFLHGLAAAAASVVINA-LMRDMFPKEEFSRMMSF----VT----LVMTIAPLLAPIIGGWLLVW--FSWHAIFWVLALA 154 (377)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHhcCHHHHHHHHHH----HH----HHHHHHHHHHHHHHHHHHHH--cChHHHHHHHHHH
Confidence 99999999988887756 77776 334443332 22 23345555666666666543 4667788777766
Q ss_pred HHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---H
Q 012965 208 LAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---G 284 (452)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~ 284 (452)
.++.........||+++++++++...++..++.++.+++++.+.......+.....+. ...+.|.+..+..+.++ +
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~s~~~~g 233 (377)
T PRK11102 155 AILAAALVFFFIPETLPKERRQPFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFS-FLTAGPFVYIELNGVSPQNFG 233 (377)
T ss_pred HHHHHHHHHHhCCccCcccccCCCChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHH-HHHcCHHHHHHHhCCCHHHHH
Confidence 6665555444556644332222212222234455677888877665554444444333 35566666655455443 5
Q ss_pred HHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHH
Q 012965 285 FIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEAC 364 (452)
Q Consensus 285 ~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 364 (452)
.......++.+++.++.+++.||+|+|+. +..+..+..+............. + .+...+...+...+
T Consensus 234 ~~~~~~~~~~~~~~~~~g~l~~r~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~-------~----~~~~~~~~~~~~~~ 300 (377)
T PRK11102 234 YYFALNIVFLFVMTIINSRFVRRVGALNM--LRFGLWIQFIMGIWLVVSALLDL-------G----FWALVVGVAAFVGC 300 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCHHHH--HHHHHHHHHHHHHHHHHHHHHhh-------h----HHHHHHHHHHHHHH
Confidence 67777788899999999999999998873 33333322222111111111100 0 02233344444445
Q ss_pred hhchhhHHHHHHhhcCCcccccchhhhhhhh---hhHHHHHHH
Q 012965 365 VGIFWPSIMKMRSQYIPEEARSTIMNFFRIP---LNIFVCVVL 404 (452)
Q Consensus 365 ~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~---~~~~~~~~l 404 (452)
.+...+.......|..| +.++++.++.+.. .+..++...
T Consensus 301 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~ 342 (377)
T PRK11102 301 VSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALL 342 (377)
T ss_pred HHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 55555556667788776 6788888776543 334444444
No 29
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.96 E-value=6.4e-26 Score=215.89 Aligned_cols=334 Identities=13% Similarity=0.094 Sum_probs=208.1
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhc
Q 012965 42 YLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKH 120 (452)
Q Consensus 42 ~~~~~~~~~~~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~ 120 (452)
+....+..........|.+|.+.+|+|.|.++.|++.+...+...+++++.|+++||+|||+++..+..+.+++. ++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~ 87 (382)
T PRK10091 8 LALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTL 87 (382)
T ss_pred HHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHH
Confidence 333334444455555888899999999999999999888888888999999999999999999999999999876 6789
Q ss_pred CccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchh
Q 012965 121 SPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAP 200 (452)
Q Consensus 121 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~ 200 (452)
++|++.+++.|++.|++.+...+.... ++.|..+++++....+ ....+..+|..+++.+++.+.+. ++||+.
T Consensus 88 ~~~~~~l~~~r~l~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~g~~l~~~l~~~--~gwr~~ 159 (382)
T PRK10091 88 SSSYLMLAIGRLVSGFPHGAFFGVGAI-VLSKIIKPGKVTAAVA-----GMVSGMTVANLLGIPLGTYLSQE--FSWRYT 159 (382)
T ss_pred hCcHHHHHHHHHHHHhhhHHHHHHHHH-HHHHhCChHHhhHHHH-----HHHHHHHHHHHHhccHHHHHhhh--ccHHHH
Confidence 999999999999999999988776644 6666633333222111 12234556666666777766643 567788
Q ss_pred hHHHHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCC
Q 012965 201 FDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEE 280 (452)
Q Consensus 201 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 280 (452)
|.+.+++.++.........||.++++++ +. ++.. +..++++.+.......+.....+. ...+.+.+.++..|
T Consensus 160 f~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g 231 (382)
T PRK10091 160 FLLIAVFNIAVLASIYFWVPDIRDEAKG--GL----REQF-HFLRSPAPWLIFAATMFGNAGVFA-WFSYIKPYMMFISG 231 (382)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCccccc--CH----HHHH-HHhcChHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcC
Confidence 8887776665554444456664322211 11 1112 235666666554433333333222 23445555555455
Q ss_pred Cch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHH
Q 012965 281 IPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLG 357 (452)
Q Consensus 281 ~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (452)
.++ +.......++.++++++.+++.||+++|+. +.....+..+..+........ . +...+.
T Consensus 232 ~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~--~~~~~~~~~i~~~~~~~~~~~-----------~---~~~~~~ 295 (382)
T PRK10091 232 FSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRI--AAVTDFIIVLALLMLFFFGGM-----------K---TASLIF 295 (382)
T ss_pred CCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhH--HHHHHHHHHHHHHHHHHHHhh-----------H---HHHHHH
Confidence 543 566777888999999999999999998873 444444444433332221111 0 123334
Q ss_pred HHHHHHHhhchhhH-HHHHHhhcCCcccccchhhh--hhh--hhhHHHHHHHhcc
Q 012965 358 FCTFEACVGIFWPS-IMKMRSQYIPEEARSTIMNF--FRI--PLNIFVCVVLYNV 407 (452)
Q Consensus 358 ~~~~g~~~~~~~~~-~~~~~~~~~p~~~r~~~~g~--~~~--~~~~~~~~~l~~~ 407 (452)
.++.+.+.....+. ......+..|++.++.+.+. .+. ..++.+++.+.+.
T Consensus 296 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~Gp~~~G~l~~~ 350 (382)
T PRK10091 296 AFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFNLGSAIGAYCGGMMLTL 350 (382)
T ss_pred HHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHhHHHHHc
Confidence 44445554433433 33445555566666654321 111 2455666666664
No 30
>PRK12382 putative transporter; Provisional
Probab=99.96 E-value=1.1e-25 Score=215.30 Aligned_cols=348 Identities=16% Similarity=0.143 Sum_probs=210.2
Q ss_pred hHHHHHHHHHHHHhhhhhhhhHHH-HHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-
Q 012965 39 KNNYLLVYSLMMAGDWLQGPYVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC- 116 (452)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~p~l~~-i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~- 116 (452)
.+......++..+..++..|.+|. +.+|+|.|+.++|.+.+...+...+.+++.|+++||+||||++..+.+...++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~ 96 (392)
T PRK12382 17 LFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGL 96 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHH
Confidence 333444444555566666888875 468999999999999999999899999999999999999999999888776542
Q ss_pred ---HHhc-----CccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 012965 117 ---ITKH-----SPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLF 185 (452)
Q Consensus 117 ---l~~~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l 185 (452)
+++. .++++.+++.|+++|++.+...+...+ ++.|. ++|++..+.. +.+ ...|..+++.+
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~-~~~~~~~~~~r~~a~~~~----~~~----~~~g~~~g~~~ 167 (392)
T PRK12382 97 AYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALT-WGLGLVGPKHSGKVMSWN----GMA----MYGALAAGAPL 167 (392)
T ss_pred HHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhCCccccchhhhHH----HHH----HHHHHHHHHHH
Confidence 1222 357889999999999999988777655 55554 5566655532 222 33444555556
Q ss_pred hhhhhcccCCCcchhhHHHHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhh
Q 012965 186 GNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYT 265 (452)
Q Consensus 186 ~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (452)
++.+.+. ++|+..+.+..+..++..... +..||+++++++ ++ +.++..+..++ +... ..+.... +.
T Consensus 168 ~~~l~~~--~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~---~~~~~~~~~~~-~~~~-----~~l~~~~-~~ 233 (392)
T PRK12382 168 GLLLHSH--FGFAALALTTMVLPLLAWAFN-GTVRKVPAHAGE-RP---SLWSVVGLIWK-PGLG-----LALQGVG-FA 233 (392)
T ss_pred HHHHHhc--cChHHHHHHHHHHHHHHHHHH-HhccCCCCCccc-Cc---hHHHHHHHHHH-hHHH-----HHHHHHH-Hh
Confidence 5555543 456665555444433332222 233433222111 11 11111122111 1111 1111111 22
Q ss_pred hhhhhccccccCCCCCc-hHHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCC
Q 012965 266 FVFLWTPALSPNDEEIP-HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKS 344 (452)
Q Consensus 266 ~~~~~~p~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (452)
....+.|.+.++. +.+ .+.......++.++++++.+++.||+|+|+. +..+..+..+...........
T Consensus 234 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~--~~~~~~~~~~~~~~~~~~~~~-------- 302 (392)
T PRK12382 234 VIGTFVSLYFASK-GWAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKV--AIVSLLVETVGLLLLWLAPTA-------- 302 (392)
T ss_pred HHHHHHHHHHHhc-CCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCee--hHHHHHHHHHHHHHHHHcccH--------
Confidence 2345556665542 332 3555566677788999999999999998873 444444444443332221111
Q ss_pred CCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh------hhHHHHHHHhccccCCchHHHHH
Q 012965 345 GGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGM 418 (452)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~ 418 (452)
+.......+.+++.+...+...+...|..|+++|+++.|+.+.. .+..+.+.+.+..+ +...+..
T Consensus 303 -------~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g--~~~~~~~ 373 (392)
T PRK12382 303 -------WVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFG--YPSVFLA 373 (392)
T ss_pred -------HHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--chHHHHH
Confidence 24455667778888877888888899999999999999987764 23345555556533 4444444
Q ss_pred HHHHHHHHHHH
Q 012965 419 CSIFLLVASVL 429 (452)
Q Consensus 419 ~~~~~~~~~~~ 429 (452)
.+.+.++....
T Consensus 374 ~~~~~~~~~~~ 384 (392)
T PRK12382 374 GAISAVLGIIV 384 (392)
T ss_pred HHHHHHHHHHH
Confidence 44444444333
No 31
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.96 E-value=2.2e-26 Score=223.72 Aligned_cols=358 Identities=11% Similarity=0.038 Sum_probs=207.1
Q ss_pred chhhHHHHHHHHHHHHhhhhh----hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHH
Q 012965 36 NSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLT 111 (452)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~----~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~ 111 (452)
++.+|..+..+++.......+ .+.+|.+.++ |+|+.+.|++.+...+...+++++.|+++||+|||+++..+.++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~ 102 (452)
T PRK11273 24 RRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLIL 102 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHH
Confidence 344455444444444444433 4556777777 99999999999998888889999999999999999999999998
Q ss_pred HHHHH-HHhcC----ccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 012965 112 YILSC-ITKHS----PQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSG 183 (452)
Q Consensus 112 ~~i~~-l~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~ 183 (452)
.+++. ++++. ++++.+++.|++.|++.+...+.... .+.|+ ++|++..+. .+.+..+|.. ..++
T Consensus 103 ~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~-~~~~~~~~~~r~~~~~~----~~~~~~~g~~---~~~~ 174 (452)
T PRK11273 103 AAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGR-TMVHWWSQKERGGIVSV----WNCAHNVGGG---LPPL 174 (452)
T ss_pred HHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHH-HHHHhCChHHHHHHHHH----HHHHHHhhhh---HHHH
Confidence 88865 44553 47888999999999999988776655 55655 334444432 2222222221 2222
Q ss_pred hhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHhccccccCCC---Ccch-------------hHHHHHHHh-hHHhhcc
Q 012965 184 LFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDP---SESK-------------DLLTQFRGA-AVAIASD 246 (452)
Q Consensus 184 ~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------~~~~~~~~~-~~~~~~~ 246 (452)
..+..+... .+||..|++.+.+.++..++.....||++++. ++++ +..++.++. .+..+|+
T Consensus 175 l~~~~~~~~--~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (452)
T PRK11273 175 LFLLGMAWF--NDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPN 252 (452)
T ss_pred HHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHHcC
Confidence 222111111 26777888776665554444433444432210 0000 000001111 1236678
Q ss_pred hhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCC--CCchhHHHHHHH
Q 012965 247 EKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSP--PRVESYMQIVFV 321 (452)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g--~~~~~~~~~~~~ 321 (452)
+.++...+...+.....+. ...|.|.|+++..+.+. +.......++.+++.++.|+++||++ ||+. .......
T Consensus 253 ~~~~~~~l~~~~~~~~~~~-~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~-~~~~~~~ 330 (452)
T PRK11273 253 KLLWYIAIANVFVYLLRYG-ILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGA-TGVFFMT 330 (452)
T ss_pred hHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcch-HHHHHHH
Confidence 8888776666666655454 57799999987655543 45556667888899999999999984 3331 1111112
Q ss_pred HHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhhh-----
Q 012965 322 VSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPL----- 396 (452)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~----- 396 (452)
+..+..... ..... .+. +.........+.......+....+..|.+|++.|+++.|+.+...
T Consensus 331 l~~~~~~~~-~~~~~--------~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ 397 (452)
T PRK11273 331 LVTIATIVY-WLNPA--------GNP----TVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGS 397 (452)
T ss_pred HHHHHHHHH-HHhcc--------cCh----HHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHH
Confidence 222221111 11111 000 122233333343332223334556789999999999999876531
Q ss_pred --hHHHHHHHhccccCCchHHHHHHHH
Q 012965 397 --NIFVCVVLYNVDAFPITVMFGMCSI 421 (452)
Q Consensus 397 --~~~~~~~l~~~~~~~~~~~~~~~~~ 421 (452)
++.+.+.+.+..+ +...+..+..
T Consensus 398 ~~g~~v~g~l~~~~g--~~~~f~~~~~ 422 (452)
T PRK11273 398 VAASAIVGYTVDFFG--WDGGFMVMIG 422 (452)
T ss_pred HhhhhhHHHHHHHhc--chHHHHHHHH
Confidence 2234455556544 4444433333
No 32
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.96 E-value=1.4e-25 Score=214.23 Aligned_cols=317 Identities=14% Similarity=0.095 Sum_probs=215.7
Q ss_pred hhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHH
Q 012965 52 GDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIG 130 (452)
Q Consensus 52 ~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~ 130 (452)
+.....|.+|.+.+|+|.|+.+.+++.+...+...+++++.|+++||+|||+++..+..+.+++. ++.++++++.+++.
T Consensus 20 ~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (385)
T TIGR00710 20 GIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVL 99 (385)
T ss_pred HHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 44455888899999999999999999888888888889999999999999999999999988876 66889999999999
Q ss_pred HHHHHhHhhhhhhhhhhhhhhhccc---ccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHH
Q 012965 131 RILGGIATSLLFSAFESWLVAEHNK---RGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACF 207 (452)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~e~~~---r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~ 207 (452)
|++.|++.+...+...+ ++.|..+ |++..+. .+.. ..+|..+++.+++.+.++ ++||..+.+.+..
T Consensus 100 ~~l~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~----~~~g~~~g~~~~~~l~~~--~~~~~~~~~~~~~ 168 (385)
T TIGR00710 100 RFVQAFGASAGSVISQA-LVRDIYPGEELSRIYSI----LMPV----LALAPAVAPLLGGYILVW--LSWHAIFAFLSLA 168 (385)
T ss_pred HHHHHcchhHHHHHHHH-HHHHhcCcHHHHHHHHH----HHHH----HHHHHHHHHHHHHHHHHH--cCHHHHHHHHHHH
Confidence 99999999998888766 7777633 3333332 2222 334455555555555543 4667778777666
Q ss_pred HHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---H
Q 012965 208 LAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---G 284 (452)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~ 284 (452)
.++.........||+++++++. ..++..+..++.+++++++...+...+.....+. ...+.|.+.++..+.++ +
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~g 245 (385)
T TIGR00710 169 GILLSALIFFILPETLPYEARI--QISTYFETFLLLLKSKMFWGYALIYGASFGGFFA-FFSGAPFVYIDIMGVSPSVFG 245 (385)
T ss_pred HHHHHHHHHHhCCCCCCCcccC--CHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHH-HHHcChHHHHHHcCCCHHHHH
Confidence 6655555444556554333221 1122234556678888887766655544444343 46677877765555544 5
Q ss_pred HHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHH
Q 012965 285 FIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEAC 364 (452)
Q Consensus 285 ~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 364 (452)
.......++.+++.++.+++.||+++|+. +..+.....+............. . ..........+.+++
T Consensus 246 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~~~~~g~~ 313 (385)
T TIGR00710 246 LLFALNIIAMIFGGFLNGRFIKKWGAKSL--LRMGLILFAVSAVLLEITAILGL------G----SWAMIIGPMMFVGIG 313 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHH--HHHHHHHHHHHHHHHHHHHHhcc------c----hHHHHHHHHHHHHHH
Confidence 66677778899999999999999998773 33343333333333222221100 0 012334456667788
Q ss_pred hhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 365 VGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 365 ~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
.+...+.......|..| ++++++.++.+..
T Consensus 314 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~ 343 (385)
T TIGR00710 314 NSMISSIAMAYALEDFP-HVAGTASALFGTL 343 (385)
T ss_pred HHHHHHHHHHHHhccCc-ccchHHHHHHHHH
Confidence 88888888888889887 4688888876653
No 33
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.95 E-value=2.2e-25 Score=212.47 Aligned_cols=323 Identities=14% Similarity=0.045 Sum_probs=201.5
Q ss_pred HHHHHHHHHHHhhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHh
Q 012965 41 NYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITK 119 (452)
Q Consensus 41 ~~~~~~~~~~~~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~ 119 (452)
.++...++..+++.......+...+|++.++.+.+++.+...+...+.+|+.|+++||+||||+++.+..+.+++. ++.
T Consensus 7 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~ 86 (393)
T PRK11195 7 AIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLML 86 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHH
Confidence 3444555555666655455556678999999999999888888888999999999999999999999999998865 455
Q ss_pred cCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcch
Q 012965 120 HSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVA 199 (452)
Q Consensus 120 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~ 199 (452)
++++. ++.|+++|++.+...|+..+ ++.|..+++++....+ ..+.. ..++..++|.+++.+.+. .|+.
T Consensus 87 ~~~~~---~~~r~l~G~~~a~~~pa~~a-~i~~~~~~~~~~~a~~-~~~~~----~~~~~~~Gp~lgG~l~~~---~~~~ 154 (393)
T PRK11195 87 FGIHP---LLAYGLVGIGAAAYSPAKYG-ILTELLPGEKLVKANG-WMEGS----TIAAILLGTVLGGALADP---HAEA 154 (393)
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHH-HHHHHcCHHHHHHHHH-HHHHH----HHHHHHHHHHHHHHHHHH---HHHH
Confidence 55553 78899999999999999877 8888733333332222 12222 334555555666655542 3566
Q ss_pred hhHHHHHHHHHHHHHHHhccccccCCCCcc----hhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccc
Q 012965 200 PFDAAACFLAIGMVIILSSWTENYGDPSES----KDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALS 275 (452)
Q Consensus 200 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 275 (452)
.+.+.+...++..+ .....||+++++++. .+..++.++..+.++++|..........+....... .....|.+.
T Consensus 155 ~~~i~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 232 (393)
T PRK11195 155 ALAVCALIYLLAAL-FNLFIPRLGARRPGQSWNPIALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGAT-LRFLVLAWA 232 (393)
T ss_pred HHHHHHHHHHHHHH-HHhcCCCCcccccccCCCHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 66655544433322 223556543222111 111233334455677777665443333332222222 233344455
Q ss_pred cCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchh
Q 012965 276 PNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGS 352 (452)
Q Consensus 276 ~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (452)
++..+.++ |.......++.+++++..+++.||.++++ .+..+. ..+............ +
T Consensus 233 ~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~--~~~~g~-~~~~~~~~~~~~~~~---------------~ 294 (393)
T PRK11195 233 PVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLR--VLPAGI-LMGLVVLLMALQHSL---------------L 294 (393)
T ss_pred HHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc--hHHHHH-HHHHHHHHHHHHhHH---------------H
Confidence 54445443 67777888899999999999999988776 233332 222222222111111 2
Q ss_pred hHHHHHHHHHHHhhchhhHHHHHHhhcCCccc-ccchhhhhhhh
Q 012965 353 LQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA-RSTIMNFFRIP 395 (452)
Q Consensus 353 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~-r~~~~g~~~~~ 395 (452)
.......+.|++.+...+..++..+|..|++. +|++.++.++.
T Consensus 295 ~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~ 338 (393)
T PRK11195 295 PAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFN 338 (393)
T ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHH
Confidence 34556667888888878878888888766655 78888887764
No 34
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.95 E-value=8.3e-26 Score=221.95 Aligned_cols=331 Identities=15% Similarity=0.030 Sum_probs=221.6
Q ss_pred HHHHHHHHHHHHhhhhh----hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHH
Q 012965 40 NNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILS 115 (452)
Q Consensus 40 ~~~~~~~~~~~~~~~~~----~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~ 115 (452)
|..+....+..+...++ ...+|.+.+|+|.+.++.+++.+...+......++.|+++||+|||+++..+..+++++
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~ 84 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLA 84 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 33444444444444444 67788999999999999999988877777778889999999999999999999999997
Q ss_pred H-HHhcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 012965 116 C-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD 191 (452)
Q Consensus 116 ~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~ 191 (452)
. ++++++|++.++++|+++|++.+...+.....+..+. ++|++..+. . ..+..+|..++|.+++.+.+
T Consensus 85 ~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~----~----~~~~~~g~~~gp~lgg~l~~ 156 (495)
T PRK14995 85 SLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGV----W----AAVGSGGAAFGPLVGGILLE 156 (495)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH----H----HHHHHHHHHHHHHHHHHhhc
Confidence 6 7799999999999999999999998887655232332 334443332 2 22344666777777777776
Q ss_pred ccCCCcchhhHHHHHHHHHHHHHHHhccccccCCCCcchhHHHH-------------H----------------------
Q 012965 192 SFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQ-------------F---------------------- 236 (452)
Q Consensus 192 ~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~---------------------- 236 (452)
+. +||+.|++...+.++...+.....|+++++++++.+.... .
T Consensus 157 ~~--gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (495)
T PRK14995 157 HF--YWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGAL 234 (495)
T ss_pred cC--ChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHH
Confidence 54 5667788877666666555554556543322221111000 0
Q ss_pred ------HHh--------hHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---HHHHHHHHHHHHHHhH
Q 012965 237 ------RGA--------AVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSS 299 (452)
Q Consensus 237 ------~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~ 299 (452)
..+ ..+++|+|.+........+.....+. ...+.|.|+++..+.++ +.......++..++.+
T Consensus 235 ~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~ 313 (495)
T PRK14995 235 LLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVG-FELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGP 313 (495)
T ss_pred HHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 000 01345666655544444444444343 46678888876666654 6777777888999999
Q ss_pred HHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhc
Q 012965 300 LASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQY 379 (452)
Q Consensus 300 ~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 379 (452)
+.|++.||+|+|+ .+..+..+..+........... .+ .+......++.|++.+...+.....+.+.
T Consensus 314 ~~g~l~~r~g~~~--~~~~g~~~~~~~~~~l~~~~~~--------~~----~~~~~~~~~l~G~g~g~~~~~~~~~~~~~ 379 (495)
T PRK14995 314 IAGILVSRLGLRL--VATGGMALSALSFYGLAMTDFS--------TQ----QWQAWGLMALLGFSAASALLASTSAIMAA 379 (495)
T ss_pred HHHHHHHHcCchH--HHHHHHHHHHHHHHHHHHhcCC--------Cc----hHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 9999999999876 3444444443333332222111 00 02345567788999998888888899999
Q ss_pred CCcccccchhhhhhhh
Q 012965 380 IPEEARSTIMNFFRIP 395 (452)
Q Consensus 380 ~p~~~r~~~~g~~~~~ 395 (452)
.|+++++.+.++.++.
T Consensus 380 ~~~~~~g~~~~~~~~~ 395 (495)
T PRK14995 380 APPEKAAAAGAIETMA 395 (495)
T ss_pred CCHHhcchHHHHHHHH
Confidence 9999999998887764
No 35
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.95 E-value=1.4e-25 Score=213.53 Aligned_cols=353 Identities=17% Similarity=0.135 Sum_probs=215.2
Q ss_pred HHHHHHHHhhhhhhhhHHHH-HhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHH-HHHHHHHH-HHhc
Q 012965 44 LVYSLMMAGDWLQGPYVYYL-YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTY-CLTYILSC-ITKH 120 (452)
Q Consensus 44 ~~~~~~~~~~~~~~p~l~~i-~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~-~~~~~i~~-l~~~ 120 (452)
...++..++.+...|.+|.. .+++|.|+.++|++.+...+.+.+.+++.|+++||+||||.++.. ....+++. ++++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 83 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW 83 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh
Confidence 34455566677778888764 578999999999998888888889999999999999999876654 44445554 6688
Q ss_pred CccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcch
Q 012965 121 SPQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVA 199 (452)
Q Consensus 121 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~-~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~ 199 (452)
++|++.+++.|++.|.+.+...|...+ +..|. +++++....... ....+..+|..+++.+++.+.+. ++||.
T Consensus 84 ~~~~~~l~~~~~~~g~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~ig~~~~~~l~~~--~~~~~ 156 (375)
T TIGR00899 84 NRNYFLLLVLGVLLSSFASTANPQLFA-LAREHADRTGREAVMFSS----VMRAQISLAWVIGPPLAFWLALG--FGFTV 156 (375)
T ss_pred cchHHHHHHHHHHHHhhhhhhHHHHHH-HHHHHhhhcchhhHHHHH----HHHHHHhHHHHHhhhHHHHHHHh--cccHH
Confidence 999999999999999887777777655 66665 333332221111 12223345666666666666643 46778
Q ss_pred hhHHHHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCC
Q 012965 200 PFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDE 279 (452)
Q Consensus 200 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 279 (452)
.|.+.+...++..+......||.+++++++++ +.+.++..++++.+.......+.... ......+.|.+.++..
T Consensus 157 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 230 (375)
T TIGR00899 157 MFLTAALAFVLCGVLVWLFLPSYPRGAPGALT-----RLEVRGLLASRDTRLLFVACTLMWGC-NILYIINMPLLIIHEL 230 (375)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcccCcccccC-----cchhhhhhcCcchHHHHHHHHHHHHH-HHHHHhhhHHHHHHHc
Confidence 88887776665555554445664432221111 11222345566655443333332222 2223456677766555
Q ss_pred CCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHH
Q 012965 280 EIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLL 356 (452)
Q Consensus 280 ~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (452)
+.++ +...........++.++.+++.||++||+. +........+........... +....
T Consensus 231 g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~--~~~~~~~~~~~~~~~~~~~~~---------------~~~~~ 293 (375)
T TIGR00899 231 GLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRL--MLLAALAGVAFYTGLAADNSL---------------WALLM 293 (375)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhH--HHHHHHHHHHHHHHHHHHHHH---------------HHHHH
Confidence 5544 444444455677788899999999998873 333333322222221111111 23445
Q ss_pred HHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh------hhHHHHHHHhccccCCchHHHHHHHHHHHHHHHH
Q 012965 357 GFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGMCSIFLLVASVL 429 (452)
Q Consensus 357 ~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (452)
...+.+++.+...+....+.+|..|++ +++++|+.+.. .+..+++.+.+.. ++...+...++..++....
T Consensus 294 ~~~~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~--g~~~~~~~~~~~~~~~~~~ 369 (375)
T TIGR00899 294 LQLLNAIFIGILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERW--SYHAVYWFAIVMLIVALFC 369 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cchhHHHHHHHHHHHHHHH
Confidence 566677778877788888999998875 56888876653 2334445555543 3444455544444444333
No 36
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.95 E-value=1.4e-25 Score=214.29 Aligned_cols=333 Identities=17% Similarity=0.117 Sum_probs=212.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHHH-HhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-H
Q 012965 40 NNYLLVYSLMMAGDWLQGPYVYYL-YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-I 117 (452)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~p~l~~i-~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l 117 (452)
+..+...++...+.....|+++.. .+++|.|+.++|.+.+...+...+.+++.|+++||+|||+++..+..+.+++. +
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~ 92 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFAT 92 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 344455556666666667777654 47899999999999998888888888999999999999999999999999876 6
Q ss_pred HhcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccC
Q 012965 118 TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS 194 (452)
Q Consensus 118 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~ 194 (452)
+.++++++.+++.|+++|++.+...+...+ ++.|. ++|++..+..+. ... +|..+++.+++.+. .
T Consensus 93 ~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~~----~~~----~g~~ig~~l~g~l~---~ 160 (400)
T PRK11646 93 MAIAHEPWLLWLSCILSGLGGTLFDPPRTA-LVIKLIRPHQRGRFFSLLMM----QDS----AGAVIGALLGSWLL---Q 160 (400)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCHHHHHHHHHHHHH----HHH----HHHHHHHHHHHHHH---H
Confidence 678899999999999999999888777756 66655 445554443222 333 44444555555544 2
Q ss_pred CCcchhhHHHHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhcccc
Q 012965 195 LGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPAL 274 (452)
Q Consensus 195 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 274 (452)
++|+..|++.++..++..+......||.++++ +. ++.+++.++.+++++++............ +.....+.|.+
T Consensus 161 ~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~ 234 (400)
T PRK11646 161 YDFRLVCATGAVLFVLAAAFNAWLLPAYKLST-VR----TPVREGMTRVLRDKRFVTYVLTLTGYYML-AVQVMLMLPIM 234 (400)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCcccccc-cc----hhhHHHHHHHHcCchHHHHHHHHHHHHHH-HHHHHHhhhhh
Confidence 46778888776665554444333445432211 11 12233455677888876654433322222 22235578888
Q ss_pred ccCCCCCch--HHHHHHHHHHHHHHhHHHHHHhcc-CCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccch
Q 012965 275 SPNDEEIPH--GFIFATFMLASMLGSSLASRLMAR-SPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSG 351 (452)
Q Consensus 275 ~~~~~~~~~--~~~~~~~~i~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (452)
.++..+.+. +...+...+....+....+++.|| ++.++ .+..+..+.++...........
T Consensus 235 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~~~~~~~~~~l~~~~~~--------------- 297 (400)
T PRK11646 235 VNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEH--RLMAGLLIMSLSMFPIGMVSNL--------------- 297 (400)
T ss_pred HHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhH--HHHHHHHHHHHHHHHHHHhhhH---------------
Confidence 776544322 555555555555555555666654 54343 2334443444333332222111
Q ss_pred hhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhhh------hHHHHHHHhcc
Q 012965 352 SLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPL------NIFVCVVLYNV 407 (452)
Q Consensus 352 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~------~~~~~~~l~~~ 407 (452)
+...+...+++.+.+...|...++..|..|+++|++++|+.+... ++.+++.+.+.
T Consensus 298 ~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~ 359 (400)
T PRK11646 298 QQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDL 359 (400)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHH
Confidence 233445566777777777888999999999999999999888642 33455566554
No 37
>PRK03699 putative transporter; Provisional
Probab=99.95 E-value=1.3e-25 Score=214.70 Aligned_cols=321 Identities=12% Similarity=0.064 Sum_probs=200.1
Q ss_pred hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHH
Q 012965 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G 135 (452)
++.+|++.+++|+|.++.+.+.+...+...++.++.|++.||+|||+++..+.++.+++. +++++++++.+++.|+++|
T Consensus 27 g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G 106 (394)
T PRK03699 27 GMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLG 106 (394)
T ss_pred hhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHH
Confidence 777889999999999999998888888777888899999999999999999999888876 6788999999999999999
Q ss_pred hHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHHH
Q 012965 136 IATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVII 215 (452)
Q Consensus 136 ~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~ 215 (452)
++.+...+...+ ++.|..+++++..... ... .+..+|..++|.+.+.+.+ ..++||..|.+.+++.++..++.
T Consensus 107 ~~~g~~~~~~~~-~i~~~~~~~~r~~~~~-~~~----~~~~~g~~~~~~~~~~l~~-~~~gw~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK03699 107 VVSGITMSIGTF-LITHVYEGKQRGSRLL-FTD----SFFSMAGMIFPIIAAYLLA-RSIEWYWVYACIGLVYVAIFILT 179 (394)
T ss_pred HhhHhhccchhH-HhhhhcccchHHHHHH-HHH----HHHHHHHHHHHHHHHHHHh-ccccHHHHHHHHHHHHHHHHHHH
Confidence 999988877655 6666632222221111 111 2233455555555555443 23577888887666655544433
Q ss_pred Hh-ccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---HHHHHHHH
Q 012965 216 LS-SWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFM 291 (452)
Q Consensus 216 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~ 291 (452)
.. ..|+.++++++ +.. +..+. ..+++++.......+.....+. ...|.|.|.++..+.+. +...+...
T Consensus 180 ~~~~~p~~~~~~~~--~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~l~~~~g~s~~~~~~~~~~~~ 251 (394)
T PRK03699 180 LFSEFPALGKHAPK--ADK----PVAKE-KWGIGVLFLAIAALLYILAQLT-FISWVPEYAQKKFGMSLEDAGNLVSNFW 251 (394)
T ss_pred HhcCCccccccCcc--ccC----ccccc-cCChHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCChHHhhHHHHHHH
Confidence 32 22321111111 000 00111 1234455444444433333333 57899999977666654 56667777
Q ss_pred HHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhH
Q 012965 292 LASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPS 371 (452)
Q Consensus 292 i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 371 (452)
++..+++++.++++||+++|+. +.....+..+...... ...+ . .......+..|++.+..++.
T Consensus 252 ~~~~ig~~~~g~l~dr~~~~~~--l~~~~~~~~~~~~~~~---~~~~--------~----~~~~~~~~~~G~~~~~~~~~ 314 (394)
T PRK03699 252 MAYMVGMWIFSFIVRFFDLQRI--LTVLAGLALVLMYLFV---NTDD--------P----SHLLYAILGLGFFSSAIYTT 314 (394)
T ss_pred HHHHHHHHHHHHHHHHhchhhH--HHHHHHHHHHHHHHHH---HcCC--------c----hHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999998873 3333333222222211 1100 0 13344556677777777788
Q ss_pred HHHHHhhcCCcccccchhhhhhhh------hhHHHHHHHhccccC
Q 012965 372 IMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAF 410 (452)
Q Consensus 372 ~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~ 410 (452)
..+...|..|++ +++..|..... .++.+.+.+.+..++
T Consensus 315 ~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~ 358 (394)
T PRK03699 315 IITLGSQQTKVA-SPKLVNFILTCGTIGTMLTFVVTSPIVAHFGL 358 (394)
T ss_pred HHHHHHHHccCC-CHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCc
Confidence 888888877654 44455444332 344455556555443
No 38
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.95 E-value=3.4e-25 Score=212.51 Aligned_cols=321 Identities=14% Similarity=0.132 Sum_probs=201.6
Q ss_pred hhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHH
Q 012965 52 GDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIG 130 (452)
Q Consensus 52 ~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~ 130 (452)
...+..|.+|.+.+++|.+.++.++..+..++...+++++.|+++||+|||+++..+..+++++. ++++++|++.++++
T Consensus 31 ~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~ 110 (413)
T PRK15403 31 TTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIA 110 (413)
T ss_pred HHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 33444888999999999999999988888888888889999999999999999999999998876 67889999999999
Q ss_pred HHHHHhHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHH
Q 012965 131 RILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAI 210 (452)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~ 210 (452)
|+++|++.+...+.... ++.|..+++++..... .... +..+++.+++.+++.+.++ ++||..|++.++..++
T Consensus 111 r~l~Gi~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~g~~lg~~l~~~--~gw~~~f~~~~~~~~i 182 (413)
T PRK15403 111 RFIQGTSICFIATVGYV-TVQEAFGQTKGIKLMA-IITS----IVLVAPIIGPLSGAALMHF--VHWKVLFAIIAVMGLI 182 (413)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHhcCHHHHHHHHH-HHHH----HHHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHH
Confidence 99999998865554433 5666533222222111 1222 2345556666666665543 5678888887777666
Q ss_pred HHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---HHHH
Q 012965 211 GMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIF 287 (452)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~ 287 (452)
..+...+..||++++++++ ...++..++.++++|||+++.......+.....+. ...+.|.+.++..+.++ +...
T Consensus 183 ~~~~~~~~lp~~~~~~~~~-~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~-~~~~~P~~l~~~~g~s~~~~gl~~ 260 (413)
T PRK15403 183 AFVGLLLAMPETVKRGAVP-FSAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMS-WVAVSPVILIDAGGMTTSQFAWTQ 260 (413)
T ss_pred HHHHHHHhCCCCccccCCC-CChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH-HHHhChHHHHHhcCCCHHHHHHHH
Confidence 6555454567754432221 12223345667788999998876666555555444 46678988887767655 4444
Q ss_pred HHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhc
Q 012965 288 ATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGI 367 (452)
Q Consensus 288 ~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 367 (452)
.....+.+++..+.+++.+|..+++. ......+..++............ +. .+......++.+++.+.
T Consensus 261 ~~~~~~~~i~~~l~~~~~~~~~~~~~--~~~~~~~~~ig~~l~~~~~~~~~------~~----~~~~~~~~~l~~~G~~~ 328 (413)
T PRK15403 261 VPVFGAVIVANAIVARFVKDPTEPRF--IWRAVPIQLVGLALLIVGNLLWP------HV----WLWSVLGTSLYAFGIGL 328 (413)
T ss_pred HHHHHHHHHHHHHHHHHhccCCchhH--HHHHHHHHHHHHHHHHHHHHHcc------cc----HHHHHHHHHHHHHHHHH
Confidence 44556677777777776655443331 21111111111111111110000 00 01245677778888888
Q ss_pred hhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 368 FWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 368 ~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
..|......-+.. +..+|++.++.+..
T Consensus 329 ~~p~~~~~al~~~-~~~~G~a~a~~~~~ 355 (413)
T PRK15403 329 IFPTLFRFTLFSN-NLPKGTVSASLNMV 355 (413)
T ss_pred HhHHHHHHHhccC-CCCCcHHHHHHHHH
Confidence 8777775433222 22356666655543
No 39
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.95 E-value=2.7e-25 Score=212.32 Aligned_cols=364 Identities=15% Similarity=0.148 Sum_probs=211.6
Q ss_pred ccchhhHHHHHHHHHHHHhhhhhhhhHHHH-HhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHH-HHHHH
Q 012965 34 AFNSFKNNYLLVYSLMMAGDWLQGPYVYYL-YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACV-TYCLT 111 (452)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~i-~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~-~~~~~ 111 (452)
.+++..+..++..++...+..+..|.++.. .+|+|.|++++|.+.+.....+.+.+++.|.++||+||||.++ .+.+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~ 91 (393)
T PRK15011 12 SFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLL 91 (393)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHH
Confidence 344444556666677777777777877664 5789999999999877666666777766655599999998755 44555
Q ss_pred HHHHH-HHhcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 012965 112 YILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLL 189 (452)
Q Consensus 112 ~~i~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~-~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l 189 (452)
.+++. +.+++++++.+++.+.+.|...+...|.... +..|+ ++|++..+.... ....+..+|..+++.+++.+
T Consensus 92 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~lg~~~g~~i~~~l 166 (393)
T PRK15011 92 GVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFA-LAREHADKTGREAVMFSS----FLRAQVSLAWVIGPPLAYAL 166 (393)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHH-HHHHHhhhccchHHHHHH----HHHHHHHHHHHHhhHHHHHH
Confidence 55554 5678899998776655555444556666644 66665 444443332222 22334456667777777777
Q ss_pred hcccCCCcchhhHHHHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchh-HHHHHHHHHhhhchhhhhhh
Q 012965 190 VDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEK-IALLGAIQSLFEGSMYTFVF 268 (452)
Q Consensus 190 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 268 (452)
.++ ++||..|...++..++..+......||.++++++.++.. + ...++++ .+.......... ..+....
T Consensus 167 ~~~--~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 236 (393)
T PRK15011 167 AMG--FSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLATGTL----E---APRRNRRDTLLLFVICTLMW-GTNSLYI 236 (393)
T ss_pred HHh--cChHHHHHHHHHHHHHHHHHHHhhcCccCCCCccccccc----c---ccccccccHHHHHHHHHHHH-HHHHHHH
Confidence 653 467788888777666655555545666543322211110 1 1122222 222222222222 2233345
Q ss_pred hhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCC
Q 012965 269 LWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSG 345 (452)
Q Consensus 269 ~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (452)
.+.|.|.++..+.+. +.......+..+++.++.|+++||++||+. +..........+.........
T Consensus 237 ~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~--~~~~~~~~~~~~~~~~~~~~~--------- 305 (393)
T PRK15011 237 INMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFL--MRVAAVAGVCFYAGMLMAHSP--------- 305 (393)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHH--HHHHHHHHHHHHHHHHHHhhH---------
Confidence 678888876666654 455555556678889999999999998872 333322222222211111111
Q ss_pred CcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh------hhHHHHHHHhccccCCchHHHHHH
Q 012965 346 GISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGMC 419 (452)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~ 419 (452)
+..+....+.++..+...+....+.+|..|++ |+++.++.+.. .+..+++.+.+.. ++...+..+
T Consensus 306 ------~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~-~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~--g~~~~~~~~ 376 (393)
T PRK15011 306 ------AILLGLQLLNAIYIGILGGIGMLYFQDLMPGQ-AGSATTLYTNTSRVGWIIAGSLAGIVAEIW--NYHAVFWFA 376 (393)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhHHHHHHH
Confidence 23344445555566655666677888998865 88888776553 3335555666543 454555555
Q ss_pred HHHHHHHHHHHHh
Q 012965 420 SIFLLVASVLQRR 432 (452)
Q Consensus 420 ~~~~~~~~~~~~~ 432 (452)
.+..++..+...+
T Consensus 377 ~~~~~~~~~~~~~ 389 (393)
T PRK15011 377 LVMIIATLFCLLR 389 (393)
T ss_pred HHHHHHHHHHHHh
Confidence 5554444444443
No 40
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.95 E-value=1.8e-25 Score=220.63 Aligned_cols=352 Identities=14% Similarity=0.079 Sum_probs=205.9
Q ss_pred CccchhhHHHHHHHHHHHHhhhhh----hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHH
Q 012965 33 SAFNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTY 108 (452)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~----~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~ 108 (452)
+..++.+|+.+....+..+.+.++ .+.+|.+.+++|.|+.+.+++.+...+...+++++.|+++||+|||+++..+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 91 (496)
T PRK03893 12 RHLNRAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVIS 91 (496)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 333455665555555555444444 7778889999999999999988888888888889999999999999999999
Q ss_pred HHHHHHHH-HHhcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHh
Q 012965 109 CLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGL 184 (452)
Q Consensus 109 ~~~~~i~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~ 184 (452)
.++.+++. ++++++|++.+++.|++.|++.+...+.... ++.|. ++|++..+. . ..+..+|..+++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~----~----~~~~~~g~~~~~~ 162 (496)
T PRK03893 92 IVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSAT-YVIESWPKHLRNKASGF----L----ISGFSIGAVVAAQ 162 (496)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCHHHHHHHHHH----H----HHHHHHHHHHHHH
Confidence 99988876 6688999999999999999999988888756 67776 333333332 2 2334466666666
Q ss_pred hhhhhhcccCCCcchhhHHHHHHHHHHHHHHHhccccccCCCC--cchhHHHHHHHh----hHHh---------------
Q 012965 185 FGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPS--ESKDLLTQFRGA----AVAI--------------- 243 (452)
Q Consensus 185 l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~----~~~~--------------- 243 (452)
+.+.+.+. ++||..|.+..+..++. ++.....||+++.++ +.++..++..+. .+..
T Consensus 163 ~~~~l~~~--~~w~~~f~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (496)
T PRK03893 163 VYSLVVPV--WGWRALFFIGILPIIFA-LWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWF 239 (496)
T ss_pred HHHHHhcc--CCHHHHHHHHHHHHHHH-HHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHH
Confidence 66666643 56677776644433332 222334455322110 000000000000 0000
Q ss_pred -h------------------------------cchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---HHHHHH
Q 012965 244 -A------------------------------SDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFAT 289 (452)
Q Consensus 244 -~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~ 289 (452)
. ++++.........+...........+.|.|+++..+.+. +...+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~ 319 (496)
T PRK03893 240 CFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFF 319 (496)
T ss_pred HHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHH
Confidence 0 000000000000000000000134577888865556544 667777
Q ss_pred HHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchh
Q 012965 290 FMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFW 369 (452)
Q Consensus 290 ~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 369 (452)
..++.+++.++.+++.||++||+. +..+..+..+........... + .+......+..+.......
T Consensus 320 ~~~~~~~g~~~~g~l~dr~g~~~~--~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~~~~~~~~~~~~ 384 (496)
T PRK03893 320 SGFGAAVGCCVGGFLGDWLGTRKA--YVCSLLISQLLIIPVFAIGGA---------N----VWVLGLLLFFQQMLGQGIS 384 (496)
T ss_pred HHHHHHHHHHHHHHHHHHhcchHH--HHHHHHHHHHHHHHHhhcccc---------H----HHHHHHHHHHHHHHhcccc
Confidence 888899999999999999998873 333333323222221111110 0 0112222222222222234
Q ss_pred hHHHHHHhhcCCcccccchhhhhhhh------hhHHHHHHHhccccCC
Q 012965 370 PSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFP 411 (452)
Q Consensus 370 ~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~ 411 (452)
+...++.+|.+|++.|++++|+.+.. .++.+++.+.+..+++
T Consensus 385 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~ 432 (496)
T PRK03893 385 GLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLG 432 (496)
T ss_pred hhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChH
Confidence 66778899999999999999886653 3445556666654433
No 41
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.95 E-value=6.3e-25 Score=210.24 Aligned_cols=317 Identities=13% Similarity=0.079 Sum_probs=202.8
Q ss_pred HhhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHH
Q 012965 51 AGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMI 129 (452)
Q Consensus 51 ~~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~ 129 (452)
+......|.+|.+.+++|.|+.+.+++.+...+...+++++.|+++||+|||+++..+..+..++. ++.++++++.+++
T Consensus 22 ~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 101 (394)
T PRK11652 22 MAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIA 101 (394)
T ss_pred HHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHH
Confidence 344555788899999999999999999888888888899999999999999999999999888875 6678899999999
Q ss_pred HHHHHHhHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHH
Q 012965 130 GRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLA 209 (452)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~ 209 (452)
.|++.|++.+...+.... +..|..++.++.. .......+..++..++|.+++.+.+. ++||..|.+.++..+
T Consensus 102 ~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~i~~~l~~~--~g~~~~f~~~~~~~~ 173 (394)
T PRK11652 102 ASAIQGLGTGVGGVMART-LPRDLYEGTQLRH-----ANSLLNMGILVSPLLAPLIGGLLTTL--FGWRACYLFLLLLGA 173 (394)
T ss_pred HHHHHHhhhhHHHHHHHH-HHHHhcCHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHhc--cChHHHHHHHHHHHH
Confidence 999999998877666544 5666522222221 11122344556666666776666643 467777877666555
Q ss_pred HHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---HHH
Q 012965 210 IGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFI 286 (452)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~ 286 (452)
+.........||+++++++++ +.++..++.+++++.+.............. ....+.+.+.++..+.+. +..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~ 248 (394)
T PRK11652 174 GVTFSMARWMPETRPADARRT----RVLASYRTLLSNRRFNCYLLMLIGTLAGIA-VFEACSGVLMGAVLGLSSMTVSIL 248 (394)
T ss_pred HHHHHHHHhCCccCccccchh----HHHHHHHHHHcChHHHHHHHHHHHHHHHHH-HHHHhChHHHHHHcCCCHHHHHHH
Confidence 444444335566543322211 234456667788877654433332222222 224455666666556554 455
Q ss_pred HHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhh
Q 012965 287 FATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVG 366 (452)
Q Consensus 287 ~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 366 (452)
.....++.+++..+.+++.||.+++. ...................... ...+.......+.+++.+
T Consensus 249 ~~~~~~~~~~g~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~g~~ 314 (394)
T PRK11652 249 FILPIPAAFFGAWFAGRPNKRFSTLM----WQSVICCLLAGLLMWIPGWFGV----------MNVWTLLVPAALFFFGAG 314 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhcc----------ccHHHHHHHHHHHHHHHH
Confidence 55566778888888888888886222 1221111111111111111100 001345566778888888
Q ss_pred chhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 367 IFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 367 ~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
...|...++..|..|+ ++++..++.+..
T Consensus 315 ~~~~~~~~~~~~~~~~-~~g~~~~~~~~~ 342 (394)
T PRK11652 315 MLFPLATSGAMEPFPY-LAGTAGALLGGL 342 (394)
T ss_pred HHHHHHHHHHHhhccc-cchHHHHHHHHH
Confidence 8889999999999875 678887776653
No 42
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.95 E-value=9.1e-25 Score=208.99 Aligned_cols=332 Identities=14% Similarity=0.103 Sum_probs=202.5
Q ss_pred HHHHHHHhhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCcc
Q 012965 45 VYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQ 123 (452)
Q Consensus 45 ~~~~~~~~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~ 123 (452)
.......+.....+.+|.+.+++|.|+.+.++..+...+...++.++.|+++||+|||+.+..+.++..++. ++..+++
T Consensus 11 ~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~ 90 (392)
T PRK10473 11 LVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAET 90 (392)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCc
Confidence 333333444444788899999999999999988888887777888999999999999999999999988876 6688899
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchh
Q 012965 124 YKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAP 200 (452)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~ 200 (452)
++.+++.|+++|++.+...+...+ ++.|. ++|++..+.. +. ...++..+++.+++.+.+. ++|+..
T Consensus 91 ~~~~~~~~~l~g~~~~~~~~~~~~-~i~~~~~~~~r~~~~~~~----~~----~~~i~~~~~~~i~~~l~~~--~g~~~~ 159 (392)
T PRK10473 91 SSLFLAGRFLQGIGAGCCYVVAFA-ILRDTLDDRRRAKVLSLL----NG----ITCIIPVLAPVLGHLIMLK--FPWQSL 159 (392)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHH-HHHHHcCHHHHHHHHHHH----HH----HHHHHHHHHHHHHHHHHhC--cChHHH
Confidence 999999999999999988777655 77776 3333333322 21 2334555566666655533 466777
Q ss_pred hHHHHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCC
Q 012965 201 FDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEE 280 (452)
Q Consensus 201 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 280 (452)
+.+.+.+.++...+.....||++++++++++ +..+..++.+++++++.......+....... ...+.|.+.++..+
T Consensus 160 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g 235 (392)
T PRK10473 160 FYTMAAMGILVLLLSLFILKETRPARAPAAS---SKPRENSESLLNRFFLSRLVITTLSVTVILT-FVNTSPVLLMEQMG 235 (392)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcccCCcc---chHHHHHHHHhCHHHHHHHHHHHHHHHHHHH-HHHhCHHHHHHHcC
Confidence 8777666665555544455665433221111 1122334556777766544443333332222 34556666655555
Q ss_pred Cch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHH
Q 012965 281 IPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLG 357 (452)
Q Consensus 281 ~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (452)
.+. +.......++.+++..+.+++.||+|||+. ...+.....+........... ......
T Consensus 236 ~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~--~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~ 298 (392)
T PRK10473 236 FSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTL--MLTSQVLFLAAGITLALSPSH---------------AVSLFG 298 (392)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH--HHHHHHHHHHHHHHHHHHHHH---------------HHHHHH
Confidence 544 556667778899999999999999998773 444444434333333322222 122333
Q ss_pred HHHHHHHhhchhhHHHHHHhhcCCccccc-chhhhhhhh--hhHHHHHHHhccccC
Q 012965 358 FCTFEACVGIFWPSIMKMRSQYIPEEARS-TIMNFFRIP--LNIFVCVVLYNVDAF 410 (452)
Q Consensus 358 ~~~~g~~~~~~~~~~~~~~~~~~p~~~r~-~~~g~~~~~--~~~~~~~~l~~~~~~ 410 (452)
..+.+.+.+...+.. ...+..|.++|+ .+.++.++. .+..+++++.+..+.
T Consensus 299 ~~l~~~g~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~l~~~~g~ 352 (392)
T PRK10473 299 ITLICAGFSVGFGVA--MSQALGPFSLRAGVASSTLGIAQVCGSSLWIWLAAVLGI 352 (392)
T ss_pred HHHHHHHHHHHhHHH--HHHHhccCcccccHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 344444444444333 334555655443 333333322 344555555554343
No 43
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.95 E-value=2.5e-25 Score=213.17 Aligned_cols=343 Identities=15% Similarity=0.079 Sum_probs=216.7
Q ss_pred hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHH
Q 012965 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G 135 (452)
++..|.+.+++|.|+.+.|++.+...+...+.+++.|+++||+|||+++..+.++.+++. ++++++|++.+++.|++.|
T Consensus 14 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 93 (399)
T TIGR00893 14 SFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLG 93 (399)
T ss_pred hHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 556678889999999999999999988888999999999999999999999999988876 6688999999999999999
Q ss_pred hHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHH
Q 012965 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (452)
Q Consensus 136 ~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~ 212 (452)
++.+...+.... ++.|. ++|++..+.. . .+..+|..+++.+++.+.+.. +|++.|...++..++..
T Consensus 94 ~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~----~----~~~~~g~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~ 162 (399)
T TIGR00893 94 AAEAPFFPGIIL-IVASWFPASERATAVSIF----N----SAQGLGGIIGGPLVGWILIHF--SWQWAFIIEGVLGIIWG 162 (399)
T ss_pred HHHHhhhhHHHH-HHHHhCCHHHHHHHHHHH----H----HhchHHHHHHHHHHHHHHHhC--CchHHHHHHHHHHHHHH
Confidence 999999888756 78876 3344433322 2 234455566666666655444 56777877666655554
Q ss_pred HHHHhccccccCCCCcch-hHHH-----------------HHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhcccc
Q 012965 213 VIILSSWTENYGDPSESK-DLLT-----------------QFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPAL 274 (452)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~-~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 274 (452)
+......||+++++++.+ +.++ +..+..++.+++|+++.......+....... ...+.|.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 241 (399)
T TIGR00893 163 VLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGF-FLTWFPTY 241 (399)
T ss_pred HHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHH-HHHHHHHH
Confidence 444433444332211100 0000 0011234567778877766665555555443 57788888
Q ss_pred ccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHH--HHHHHHHHHHHHhhhcCCCCcCCCCccc
Q 012965 275 SPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFV--VSSVSLLLPIVTSFLVAPSNVKSGGISF 349 (452)
Q Consensus 275 ~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (452)
.++..+.+. +.......++.+++.++.+++.||++||+......... ............... . +.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~--- 311 (399)
T TIGR00893 242 LVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNY-V------NI--- 311 (399)
T ss_pred HHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcc-c------hh---
Confidence 876666543 56667777889999999999999999885211111111 111111111111110 0 00
Q ss_pred chhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhhh------hHHHHHHHhccccCCchHHHHHHHHHH
Q 012965 350 SGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPL------NIFVCVVLYNVDAFPITVMFGMCSIFL 423 (452)
Q Consensus 350 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~------~~~~~~~l~~~~~~~~~~~~~~~~~~~ 423 (452)
.+.......+.+.+.+ ..+..+++.+|.+|+++|+++.|+.+... ++.+.+.+.+..+ ++...+...++..
T Consensus 312 -~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g-~~~~~~~~~~~~~ 388 (399)
T TIGR00893 312 -PYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTG-SFAGALMVVAALA 388 (399)
T ss_pred -HHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCC-chhHHHHHHHHHH
Confidence 0122222333333333 67889999999999999999998887642 2234444555433 1334444444333
Q ss_pred H
Q 012965 424 L 424 (452)
Q Consensus 424 ~ 424 (452)
+
T Consensus 389 ~ 389 (399)
T TIGR00893 389 L 389 (399)
T ss_pred H
Confidence 3
No 44
>PRK10504 putative transporter; Provisional
Probab=99.95 E-value=2.1e-25 Score=218.66 Aligned_cols=319 Identities=13% Similarity=0.069 Sum_probs=207.2
Q ss_pred hhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHH
Q 012965 54 WLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRI 132 (452)
Q Consensus 54 ~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~ 132 (452)
....+.+|.+.+|+|.|+.+.+++.+...+...++.++.|+++||+|||+++..+..+.+++. +++++++++.+++.|+
T Consensus 27 ~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 106 (471)
T PRK10504 27 TIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARV 106 (471)
T ss_pred HHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 344788889999999999999988877777667888899999999999999999988888875 5678899999999999
Q ss_pred HHHhHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHH
Q 012965 133 LGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (452)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~ 212 (452)
++|++.+...+.... ++.|..+++++..... ....+..+|..+++.+++.+.++ ++||+.|.+......+..
T Consensus 107 l~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~g~~~~g~l~~~--~gw~~~f~~~~~~~~l~~ 178 (471)
T PRK10504 107 LQGVGGAMMVPVGRL-TVMKIVPREQYMAAMT-----FVTLPGQVGPLLGPALGGLLVEY--ASWHWIFLINIPVGIIGA 178 (471)
T ss_pred HHHhhhHHHHHHHHH-HHHHHcCHHHHHHHHH-----HHHHHHHHHHHhhhHHHHHHHhh--ccHHHHHHHHHHHHHHHH
Confidence 999999999888755 6777644333332111 12223345666666777666654 456777877666555554
Q ss_pred HHHHhccccccCCCCcchhH-------------------H-------------------------HHHH--H--hhHHhh
Q 012965 213 VIILSSWTENYGDPSESKDL-------------------L-------------------------TQFR--G--AAVAIA 244 (452)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~-------------------~-------------------------~~~~--~--~~~~~~ 244 (452)
.......|+.+.++++.+.. . ++.+ + ...+++
T Consensus 179 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 258 (471)
T PRK10504 179 IATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSLKLF 258 (471)
T ss_pred HHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHh
Confidence 44443334322111110000 0 0000 0 011356
Q ss_pred cchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHH
Q 012965 245 SDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFV 321 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~ 321 (452)
|||++........+.... +.....+.|.|.++..+.++ +.......++.+++..+.+++.||+|+|+. +..+..
T Consensus 259 ~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~--~~~~~~ 335 (471)
T PRK10504 259 RTRTFSLGLAGSFAGRIG-SGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRV--LVATTL 335 (471)
T ss_pred cccchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHH--HHHHHH
Confidence 677766655444444433 33345677877775555544 556666667788888999999999998872 444444
Q ss_pred HHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 322 VSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
+..+........... . + .+.......+.|++.+...+..+....+..|++.+++++|+.++.
T Consensus 336 ~~~~~~~~~~~~~~~--------~-~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 397 (471)
T PRK10504 336 GLALVSLLFMLVALL--------G-W---YYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMI 397 (471)
T ss_pred HHHHHHHHHHhcccc--------c-c---HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHH
Confidence 444433332221111 0 0 012334456667788878888899999999999999999887764
No 45
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.95 E-value=2e-25 Score=216.74 Aligned_cols=337 Identities=9% Similarity=0.063 Sum_probs=211.2
Q ss_pred CCCccchhhHHHHHHHHHHHHhhhhh----hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHH
Q 012965 31 TSSAFNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACV 106 (452)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~ 106 (452)
++++...++|.++..+++.......+ +.+++++.+++|.+.++.+++.+.......+++++.|+++||+|||++++
T Consensus 9 ~~~~~~~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~ 88 (455)
T TIGR00892 9 GPPPDGGWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVI 88 (455)
T ss_pred CCCCCCCcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHH
Confidence 33344556676666655554433222 56678889999999999999988887777888899999999999999999
Q ss_pred HHHHHHHHHH-HHhcCccHHHHHH-HHHHHHhHhhhhhhhhhhhhhhhc--ccccchhhHHHHHHHHHHHHHHHHHHHHH
Q 012965 107 TYCLTYILSC-ITKHSPQYKILMI-GRILGGIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILS 182 (452)
Q Consensus 107 ~~~~~~~i~~-l~~~~~~~~~l~~-~r~l~G~~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~g~~ig~~~~ 182 (452)
.+.++.+++. +++++++++.+++ .|++.|++.+...+.... ++.++ ++|++..+ ....+..+|..++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~-~~~~~~~~~r~~a~g--------~~~~~~~~g~~~~ 159 (455)
T TIGR00892 89 AGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLT-MLGKYFYRRRPLANG--------LAMAGSPVFLSTL 159 (455)
T ss_pred hhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHH-HHHHHHHhhHHHHHH--------HHHhcccHHHHHH
Confidence 9998888876 6688899998865 579999999876555544 55555 33444333 2223344555666
Q ss_pred HhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHhccccccC----CCC-------c-chhH------HHHHHHh-hHHh
Q 012965 183 GLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYG----DPS-------E-SKDL------LTQFRGA-AVAI 243 (452)
Q Consensus 183 ~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~----~~~-------~-~~~~------~~~~~~~-~~~~ 243 (452)
+.+++.+.+. ++||+.|.+.+++.++..+......++.+. +++ + ..+. .++.++. ..+.
T Consensus 160 ~~l~~~l~~~--~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (455)
T TIGR00892 160 APLNQYLFES--FGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSL 237 (455)
T ss_pred HHHHHHHHHH--hChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcchHH
Confidence 6666666643 467788888776655443332222221110 000 0 0000 0011110 1145
Q ss_pred hcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHH-
Q 012965 244 ASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIV- 319 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~- 319 (452)
+++|+++.......+.....+. ...+.|.|.++ .+.+. +...+..+++.++++++.+++.||...++.+.....
T Consensus 238 ~~~~~~~~~~~~~~l~~~~~~~-~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 315 (455)
T TIGR00892 238 FTHRGFLVYLSGNVIMFLGFFA-PIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSF 315 (455)
T ss_pred hcCchHHHHHHHHHHHHHHccc-hHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHH
Confidence 6778777665555444444333 45677777654 35443 566777788889999999999998432221112222
Q ss_pred -HHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 320 -FVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 320 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
....++..+........ +...+..++.|++.+...+...+.+.|.+|++++++++|+.+..
T Consensus 316 ~~~~~~l~~ll~~~~~~~---------------~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 377 (455)
T TIGR00892 316 ALLFNGLTHLLCALAGDY---------------TGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIV 377 (455)
T ss_pred HHHHHHHHHHHHHHhchH---------------HHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHH
Confidence 12222222221111111 34556677888888888898999999999999999999888765
No 46
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.95 E-value=4.8e-25 Score=209.92 Aligned_cols=346 Identities=13% Similarity=0.120 Sum_probs=207.6
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhc
Q 012965 42 YLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKH 120 (452)
Q Consensus 42 ~~~~~~~~~~~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~ 120 (452)
++...++.........|++|.+.+++|.|..++|++.+...+...+++++.|+++||+|||+++..+.++.+++. .+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~ 90 (381)
T PRK03633 11 LLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGL 90 (381)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334444455566899999999999999999999999998888999999999999999999999999998876 6688
Q ss_pred CccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCc
Q 012965 121 SPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGP 197 (452)
Q Consensus 121 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~ 197 (452)
++|++.+++.|+++|++.+...+...+ .+.+. ++|++..+. ...+ ..+|..+++.+++.+.+.. .+
T Consensus 91 ~~~~~~l~~~~~l~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~----~~~g~~~g~~~~~~l~~~~--~~ 159 (381)
T PRK03633 91 MVGFWSWLAWRFVAGIGCAMIWVVVES-ALMCSGTSRNRGRLLAA----YMMV----YYLGTVLGQLLVSKVSTEL--MS 159 (381)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCHHHHHHHHHH----HHHH----HHHHHHHHHHHHhcccccc--cc
Confidence 999999999999999999988887655 33333 344444332 2223 3345555555555544321 11
Q ss_pred chhhHHHHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccC
Q 012965 198 VAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN 277 (452)
Q Consensus 198 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 277 (452)
...+...... .........+.++++++ ++ + .++.++.+++++++........ ....+.....+.|.|.++
T Consensus 160 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~-~------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~lp~~~~~ 229 (381)
T PRK03633 160 VLPWVTGLVL-AAILPLLFTRILNQQAE-NH-D------STSIWPMLKLRQARLGVNGCII-SGIVLGSLYGLMPLYLNH 229 (381)
T ss_pred hHHHHHHHHH-HHHHHHHHhcccCCCCC-CC-C------CCCHHHHHHhcchHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 2222221111 11111122122322111 11 0 0122334566665543222222 222222235567887765
Q ss_pred CCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhH
Q 012965 278 DEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQ 354 (452)
Q Consensus 278 ~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (452)
. +.+. +.......++.++++...+++.||+++|+ .+..+.....++..... ... ..
T Consensus 230 ~-g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~--~l~~~~~~~~~~~~~~~--~~~----------------~~ 288 (381)
T PRK03633 230 Q-GMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLL--VLRVQVFVVILGSIAML--SQA----------------AM 288 (381)
T ss_pred c-CCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHH--HHHHHHHHHHHHHHHHh--hhH----------------HH
Confidence 3 4433 56666777889999999999999999886 24434333333332221 111 12
Q ss_pred HHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh------hhHHHHHHHhccccCCchHHHHHHHHHHHHHHH
Q 012965 355 LLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGMCSIFLLVASV 428 (452)
Q Consensus 355 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 428 (452)
.....+.+.+.....|...+.+.|..|+++++...+..+.. .++.+++++.+..+ ....+...+.+.++...
T Consensus 289 ~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g--~~~~f~~~~~~~l~~~~ 366 (381)
T PRK03633 289 APALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYS--DNLLFIMIASVSFIYLL 366 (381)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHHHHH
Confidence 23445556665666788999999999988776665553332 45566666666533 44444444444444433
Q ss_pred HHH
Q 012965 429 LQR 431 (452)
Q Consensus 429 ~~~ 431 (452)
...
T Consensus 367 ~~~ 369 (381)
T PRK03633 367 MLL 369 (381)
T ss_pred HHH
Confidence 333
No 47
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.95 E-value=2.3e-26 Score=216.79 Aligned_cols=330 Identities=21% Similarity=0.285 Sum_probs=217.7
Q ss_pred HHHHHHHhhhhhhhhHH-HHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCc
Q 012965 45 VYSLMMAGDWLQGPYVY-YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSP 122 (452)
Q Consensus 45 ~~~~~~~~~~~~~p~l~-~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~ 122 (452)
..++..+......|.+| .+.+++|.|+.+++++.+...+...+.+++.|+++||+|||+++..+.++.+++. +..+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~ 83 (352)
T PF07690_consen 4 AFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFAS 83 (352)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhh
Confidence 34455556666688888 7889999999999999999988888999999999999999999999999999884 445668
Q ss_pred cHHHHHHHHHHHHhHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhH
Q 012965 123 QYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFD 202 (452)
Q Consensus 123 ~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~ 202 (452)
|.+.+++.|++.|++.+...+...+ ++.|..+++++....+ ....+..+|..+++.+++.+.+. ++||..|+
T Consensus 84 ~~~~~~~~~~l~g~~~~~~~~~~~~-~i~~~~~~~~~~~~~~-----~~~~~~~~g~~~g~~l~~~l~~~--~~~~~~~~ 155 (352)
T PF07690_consen 84 NFWLLLIARFLLGIGSGFFSPASNA-LIADWFPPEERGRAFG-----ILSAGFSLGSILGPLLGGFLISY--FGWRWAFL 155 (352)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCTCCHHHHHH-----HHHHHHHHHHHHHHHHHHHCCCH--CHHCCHHH
T ss_pred hHHHHhhhccccccccccccccccc-cccccchhhhhhhccc-----cccchhhhhhhcccchhhhhhhc--cccccccc
Confidence 8889999999999999999998866 8888733322222111 22223446666666777766643 45677788
Q ss_pred HHHHHHHHHHHHHHhccccccCCCCcc---hh---HHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhcccccc
Q 012965 203 AAACFLAIGMVIILSSWTENYGDPSES---KD---LLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSP 276 (452)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 276 (452)
+.+++.++..++.....+++++++++. ++ .+++..+..+.+++++..+..... .+.....+.....+.|.|.+
T Consensus 156 ~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~ 234 (352)
T PF07690_consen 156 ISAILSLIAAILFILFLPEPPPPRERESPKESESKKPKPLKPGFKSLFKNPVLWILLIA-FFLFFFVFSGFSFFLPLYLQ 234 (352)
T ss_dssp HHHHHHHHHHHHHHCCC---STTTT--SSTTTT--HHHCCCH-CTHHHHHHCCHHHHHH-HHHHHHHHHHHHHHHHHHCC
T ss_pred cccchhhhhhhhHhhhhhhcccccccccccccccccccccccccccccccchhhhhhhh-hhHHHHHHHHhhcccchhhh
Confidence 888877776654333333332222111 11 111111225566676766522222 22222223335778888876
Q ss_pred CCCCCc-h---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchh
Q 012965 277 NDEEIP-H---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGS 352 (452)
Q Consensus 277 ~~~~~~-~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (452)
+..+.+ . +.......+...++.++.+++.||+++|+. .........+............+ ..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~------------~~ 300 (352)
T PF07690_consen 235 EVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRR--LLIAILLLILGALGLLLLPFSSS------------PV 300 (352)
T ss_dssp HHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH--HHHHHHHHHHHHHHHCCSHHHCH------------HH
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHH--HHHHHHHHHHHHHHHHHHHHhhh------------HH
Confidence 666665 3 455677778888889999999999987663 22222222222222211111100 02
Q ss_pred hHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhhhh
Q 012965 353 LQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLN 397 (452)
Q Consensus 353 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~ 397 (452)
.......+.|++.+...+...++..|..|+++|+++.|+.+...+
T Consensus 301 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 345 (352)
T PF07690_consen 301 WLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGS 345 (352)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 445567778889998899999999999999999999999886543
No 48
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.95 E-value=7.4e-25 Score=208.50 Aligned_cols=335 Identities=12% Similarity=0.068 Sum_probs=223.8
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHH-HHH-H-HH
Q 012965 42 YLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTY-ILS-C-IT 118 (452)
Q Consensus 42 ~~~~~~~~~~~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~-~i~-~-l~ 118 (452)
.....+....+.++..|++|...+|+|.|.+++|.+.+...+...+.++++|+++||+|||+......... .+. . .+
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~ 88 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFS 88 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 33444555556677799999999999999999999999988888899999999999999854432222211 121 2 33
Q ss_pred hcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCc
Q 012965 119 KHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGP 197 (452)
Q Consensus 119 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~-~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~ 197 (452)
..+++++.+++.|.++|.+.+...|...+ +..|+ ++|++..+..+. +..+|..+++.+++.+.++. +|
T Consensus 89 ~~~~~~~~l~~~~~l~~~~~~~~~p~~~a-l~~~~~~~~~~~~g~~~~--------~~slG~~~g~~l~g~l~~~~--g~ 157 (382)
T TIGR00902 89 AGAHNAWLLFIAIGLFALFFSAGMPIGDA-LANTWQKQFGLDYGKVRL--------IGSAAFIIGSALFGGLIGMF--DE 157 (382)
T ss_pred HhhhhHHHHHHHHHHHHHHHccchhHHHH-HHHHHHHHcCCCccHHHH--------HHHHHHHHHHHHHHHHHHHc--Ch
Confidence 56889999999999999998888888766 55554 555665553322 23366677777777777554 55
Q ss_pred chhhHHHHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccC
Q 012965 198 VAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN 277 (452)
Q Consensus 198 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 277 (452)
|..|.+......+... .....|+.+++++++++. ++..++.++++|+|+++.......+....... ...+.|.+.++
T Consensus 158 ~~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~-~~~~~~~~l~~ 234 (382)
T TIGR00902 158 QNILAILTAGLAFMLI-GFLIKPTIPPKDAIPEDE-SQGDSAFIALLKNPMNLRFLAAVCLIQGAHAA-YYGFSAIYWQA 234 (382)
T ss_pred hHHHHHHHHHHHHHHH-HHHcCCCCCCCccccccc-cccchhHHHHHcChHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 6667665444332222 221222211111111111 11123355778899988887766666655444 46677888765
Q ss_pred CCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhH
Q 012965 278 DEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQ 354 (452)
Q Consensus 278 ~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (452)
.|.+. |..+....++.+++..+.+++.||+|+|+ .+..+.....+........... +..
T Consensus 235 -~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~--~l~~~~~~~~~~~~~~~~~~~~---------------~~~ 296 (382)
T TIGR00902 235 -AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARD--LLLISAIACVGRWAIIGAIEAF---------------PLI 296 (382)
T ss_pred -CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHH--HHHHHHHHHHHHHHHHHhHhhH---------------HHH
Confidence 55554 56667777888999999999999999877 3555555555554444332222 356
Q ss_pred HHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhh-h------hhHHHHHHHhcccc
Q 012965 355 LLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI-P------LNIFVCVVLYNVDA 409 (452)
Q Consensus 355 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~-~------~~~~~~~~l~~~~~ 409 (452)
+....+.++.++...+....++++. |+++|+++.++++. . .+..+++.+.+..+
T Consensus 297 ~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g 357 (382)
T TIGR00902 297 FLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG 357 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 7778999999999999999999998 99999988888663 2 24566777777643
No 49
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.94 E-value=1.8e-24 Score=212.72 Aligned_cols=341 Identities=14% Similarity=0.083 Sum_probs=199.7
Q ss_pred cchhhHHHHHHHHHHHHhhhhh----hhhHHHHHhhc--------CCCcchhHHHHHHHHhhhhhccccccccccccCcc
Q 012965 35 FNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTY--------GFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRK 102 (452)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~----~p~l~~i~~~~--------g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr 102 (452)
.++++++..+...+..+.++++ ++..|.+.+++ +.++.+.+++.+...++..++++++|+++||+|||
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr 85 (479)
T PRK10077 6 NSSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRR 85 (479)
T ss_pred cchHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 3445666666666666666666 56666677666 88889999998988888889999999999999999
Q ss_pred hHHHHHHHHHHHHH-HHhcC------------ccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHH
Q 012965 103 RACVTYCLTYILSC-ITKHS------------PQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSIT 166 (452)
Q Consensus 103 ~~l~~~~~~~~i~~-l~~~~------------~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~ 166 (452)
+++..+..+++++. .+++. ++++.++++|+++|++.|...+...+ +++|+ ++|++..+.
T Consensus 86 ~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~-~i~e~~~~~~rg~~~~~---- 160 (479)
T PRK10077 86 DSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPM-YIAEIAPAHIRGKLVSF---- 160 (479)
T ss_pred HHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHH-HHHhhCChhhhhHHHHH----
Confidence 99999999988765 44432 22567889999999999999998866 88888 345554443
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhh--cccCCCcchhhHHHHHHHHHHHHHHHhccccccCC---CCcchh---HHH----
Q 012965 167 FSKAIFLGNGLVAILSGLFGNLLV--DSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGD---PSESKD---LLT---- 234 (452)
Q Consensus 167 ~~~~~~~g~~ig~~~~~~l~~~l~--~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~---- 234 (452)
.+.+..+|..+++.++..+..... ....++||++|.+.++..++..+.. ...||+++. +++.++ ..+
T Consensus 161 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~-~~l~~s~~~l~~~~~~~~~~~~~~~~~~ 239 (479)
T PRK10077 161 NQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLL-YFVPETPRYLMSRGKQEQAEGILRKIMG 239 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHH-HcCCCCcHHHHHcCCHHHHHHHHHHHcC
Confidence 333333333333333222211000 0124678888888776666554433 356765421 111110 000
Q ss_pred -----HHHHhhHHhhc-----chhHHHH---HH-----HHHhhhchhhhhhhhhccccccCCCCCc---hHHHHHHHHHH
Q 012965 235 -----QFRGAAVAIAS-----DEKIALL---GA-----IQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLA 293 (452)
Q Consensus 235 -----~~~~~~~~~~~-----~~~~~~~---~~-----~~~~~~~~~~~~~~~~~p~~~~~~~~~~---~~~~~~~~~i~ 293 (452)
+..++.++..+ .++.+.. .. ...+.+...+....++.|.+.++ .+.+ ........++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~ 318 (479)
T PRK10077 240 NTLATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT-LGASTDIALLQTIIVGVI 318 (479)
T ss_pred ChhHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH-cCCCCchHHHHHHHHHHH
Confidence 00001111111 1111100 00 01111111122234455665443 3332 23444556678
Q ss_pred HHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchh-hHH
Q 012965 294 SMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFW-PSI 372 (452)
Q Consensus 294 ~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~ 372 (452)
.+++.++.++++||+|||+ .+..+..+..+............. .. .....+.++++.+.+..+ |..
T Consensus 319 ~~i~~~~~g~l~dr~g~r~--~~i~~~~~~~v~~~~l~~~~~~~~--------~~---~~~~~~~~~~~~~~~~~~~~~~ 385 (479)
T PRK10077 319 NLTFTVLAIMTVDKFGRKP--LQIIGALGMAIGMFSLGTAFYTQA--------PG---IVALLSMLFYVAAFAMSWGPVC 385 (479)
T ss_pred HHHHHHHHHHHHHHhcChH--HHHHhHHHHHHHHHHHHHHHhcCc--------cc---HHHHHHHHHHHHHHhccccchh
Confidence 8899999999999999887 344444444444433322221100 00 123334455555555433 778
Q ss_pred HHHHhhcCCcccccchhhhhhhh
Q 012965 373 MKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 373 ~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
+.+++|.+|++.|+++.|+.+..
T Consensus 386 ~~~~~e~~p~~~r~~~~g~~~~~ 408 (479)
T PRK10077 386 WVLLSEIFPNAIRGKALAIAVAA 408 (479)
T ss_pred HHHhHhhCChhHHHHHHHHHHHH
Confidence 99999999999999999987664
No 50
>PRK10054 putative transporter; Provisional
Probab=99.94 E-value=1e-24 Score=208.06 Aligned_cols=356 Identities=14% Similarity=0.080 Sum_probs=222.0
Q ss_pred hHHHHHHHHHHHHhhhhhhhhHHHHH-hhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-
Q 012965 39 KNNYLLVYSLMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC- 116 (452)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~p~l~~i~-~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~- 116 (452)
.+.++...++...+.+...|+++... +++|+|..++|++.+...+.+.+.+++.|+++||+|||+++..+.++.+++.
T Consensus 9 ~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~ 88 (395)
T PRK10054 9 TSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFI 88 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHH
Confidence 34444555555666667678776554 6899999999999998888888899999999999999999999998888876
Q ss_pred HHhcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccc
Q 012965 117 ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF 193 (452)
Q Consensus 117 l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~ 193 (452)
+.+++++++.+++.|.+.|.+.+...+...+ +..|. ++|++..+. .... ..+|..++|.+++.+.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~----~~~~----~~lg~~igp~l~~~l~~-- 157 (395)
T PRK10054 89 AIPLVNNVTLVVLFFALINCAYSVFSTVLKA-WFADNLSSTSKTKIFSL----NYTM----LNIGWTVGPPLGTLLVM-- 157 (395)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCHhHHHHHHHH----HHHH----HHHHHHHHHHHHHHHHH--
Confidence 5688999999999999998887777666655 55654 233443332 2222 23455555566665543
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccc
Q 012965 194 SLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPA 273 (452)
Q Consensus 194 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 273 (452)
++|+.+|...+++.++..+......||++++++++++ + ..+.++.+|+|+++.......+....... ...+.+.
T Consensus 158 -~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~ 231 (395)
T PRK10054 158 -QSINLPFWLAAICSAFPLVFIQIWVQRSEKAIATETG--S--VWSPSVLLQDKALLWFTCSGFLASFVSGA-FASCISQ 231 (395)
T ss_pred -hccCcHHHHHHHHHHHHHHHHHHHHhccccccccchh--h--hhhhhhhccCceehHHHHHHHHHHHHHHH-hhhhHHH
Confidence 3567788877766665544443334444322221111 1 11225667888887766554444333222 2233444
Q ss_pred ccc--CCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcc
Q 012965 274 LSP--NDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGIS 348 (452)
Q Consensus 274 ~~~--~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (452)
+.. ++.+.+. +.......+.........+++.||.++|+ .+..+..+..+...........
T Consensus 232 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~------------ 297 (395)
T PRK10054 232 YVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRP--LMTAGTLCFVIGLVGFIFSGNS------------ 297 (395)
T ss_pred HHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchh--HHHHHHHHHHHHHHHHHHcchH------------
Confidence 432 2223322 44555555556666778899999998877 2444444444443333221111
Q ss_pred cchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhh-----hhhHHHHHHHhccccCCchHHHHHHHHHH
Q 012965 349 FSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI-----PLNIFVCVVLYNVDAFPITVMFGMCSIFL 423 (452)
Q Consensus 349 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 423 (452)
.+...+...+.+++.+...|...+.+.+..|++.|++..+..+. ..++..++.+.+.. ++...+.+.+...
T Consensus 298 --~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~~Gp~~~G~l~~~~--g~~~~~~~~~~~~ 373 (395)
T PRK10054 298 --LLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQSLGWLGAAINPLVSGVILTTL--PPWSLFVILALAI 373 (395)
T ss_pred --HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHHHHHHHHHHHHHHHHHHHHHc--ChhhHHHHHHHHH
Confidence 02345566788888887778889999999999999998775543 24556667777763 4444444444444
Q ss_pred HHHHHH
Q 012965 424 LVASVL 429 (452)
Q Consensus 424 ~~~~~~ 429 (452)
.+..++
T Consensus 374 ~~~~~~ 379 (395)
T PRK10054 374 VAAWLL 379 (395)
T ss_pred HHHHHH
Confidence 433333
No 51
>PRK11043 putative transporter; Provisional
Probab=99.94 E-value=4.4e-24 Score=204.90 Aligned_cols=315 Identities=13% Similarity=0.119 Sum_probs=204.7
Q ss_pred hhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHH
Q 012965 52 GDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIG 130 (452)
Q Consensus 52 ~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~ 130 (452)
......|.+|.+.+++|.++++.++..+...+...+++++.|+++||+|||+++..+..+.+++. ++.++++++.+++.
T Consensus 21 ~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 100 (401)
T PRK11043 21 ATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVL 100 (401)
T ss_pred HHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 44444788888899999999999999998888888899999999999999999999998888876 66889999999999
Q ss_pred HHHHHhHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHH
Q 012965 131 RILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAI 210 (452)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~ 210 (452)
|+++|++.+...+...+ ++.|..++++..+..+.. .....++..+++.+++.+.+. ++||..|.+.+...++
T Consensus 101 ~~l~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~g~~i~~~l~~~--~g~~~~~~~~~~~~~~ 172 (401)
T PRK11043 101 RFVQAVGVCSAAVIWQA-LVIDRYPAQKANRVFATI-----MPLVALSPALAPLLGAWLLNH--FGWQAIFATLFAITLL 172 (401)
T ss_pred HHHHHhhhHHHHHHHHH-HHHHhcCcHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHH
Confidence 99999998877766545 677764444333322221 122335556666777766654 4567778776666655
Q ss_pred HHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---HHHH
Q 012965 211 GMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIF 287 (452)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~ 287 (452)
..+... ..+|+++++++ + +.+++.++.+|+++.+.............+. ...+.|.+.++ .+.+. +...
T Consensus 173 ~~~~~~-~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~-~g~s~~~~g~~~ 244 (401)
T PRK11043 173 LILPTL-RLKPSKKARKQ-S----QDALTFKQLLKSKTYLGNVLIFAACSAAFFA-WLTGSPFILEQ-MGYSPADIGLSY 244 (401)
T ss_pred HHHHHH-HcCCCCCcccc-c----hHHHHHHHHHcChhHHHHHHHHHHHHHHHHH-HHHHhHHHHHH-cCCCHHHHHHHH
Confidence 544443 33443322211 1 1123455667777776554444333333333 35667777654 45544 4555
Q ss_pred HHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhc
Q 012965 288 ATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGI 367 (452)
Q Consensus 288 ~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 367 (452)
....++..++....+++.||+++|+. .........+............. ++. +.......+.+++.+.
T Consensus 245 ~~~~~~~~~g~~~~~~l~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~------~~~----~~~~~~~~~~~~~~~~ 312 (401)
T PRK11043 245 VPQTIAFLVGGYGCRAALQKWGGEQL--LPWLLVLFAVSVIAIWLASLLSH------PSL----VPLLIPFCVMAAANGA 312 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHH--HHHHHHHHHHHHHHHHHHHHhcc------CcH----HHHHHHHHHHHHHHHH
Confidence 55667788899999999999987763 22222222222222111111100 000 2344556677888888
Q ss_pred hhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 368 FWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 368 ~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
.+|...+...|..|+ +++++.|+.+..
T Consensus 313 ~~~~~~~~~~~~~~~-~~g~~~g~~~~~ 339 (401)
T PRK11043 313 IYPIVVAQALRPFPQ-ATGKAAALQNTL 339 (401)
T ss_pred HHHHHHHHHhhhCcc-cChHHHHHHHHH
Confidence 888888888887765 689998887764
No 52
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.94 E-value=1.7e-24 Score=204.96 Aligned_cols=300 Identities=13% Similarity=0.036 Sum_probs=192.1
Q ss_pred hhhHHHHHh-hcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcC-----ccHHHHHH
Q 012965 57 GPYVYYLYS-TYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS-----PQYKILMI 129 (452)
Q Consensus 57 ~p~l~~i~~-~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~-----~~~~~l~~ 129 (452)
+|..+.+.+ |+|+|++|.+++.+...+.+.+..++.|++.||+|.|+++..+.++.++.. +++++ ++++.+++
T Consensus 54 ~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli 133 (462)
T PRK15034 54 SAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIV 133 (462)
T ss_pred HHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHH
Confidence 777777766 899999999999998888888888889999999999999999999998865 55665 89999999
Q ss_pred HHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhcccC-----------
Q 012965 130 GRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNL-LVDSFS----------- 194 (452)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~-l~~~~~----------- 194 (452)
.|++.|++ +..++.... .++++ ++|++..+... ...+.|..++..+.|.+... +.+..+
T Consensus 134 ~r~l~Gig-g~~f~~~~~-~vs~wfp~~~rG~A~Gi~~----g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~ 207 (462)
T PRK15034 134 IALLCGFA-GANFASSMG-NISFFFPKAKQGSALGING----GLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSV 207 (462)
T ss_pred HHHHHHHH-HHhHHHHHH-HHHHHCCHhHhHHHHHHHH----HHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccch
Confidence 99999998 556677656 67776 44666555433 23344555555555554321 111111
Q ss_pred CCcchhhHHHHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhcccc
Q 012965 195 LGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPAL 274 (452)
Q Consensus 195 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 274 (452)
.+|+..+.+..++.++..++.++..++.+++ + . . .++..+.+|+|+.|..++...+....+.. ...+.|.|
T Consensus 208 ~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~-~--~-~----~~~~~~vlk~~~~Wllslly~~tFG~fvg-~s~~lp~~ 278 (462)
T PRK15034 208 MSLANAAWIWVPLLAIATIAAWSGMNDIASS-R--A-S----IADQLPVLQRLHLWLLSLLYLATFGSFIG-FSAGFAML 278 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCcccc-c--c-C----HHHHHHHhCCCchhHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 2255555555555544444444333332211 1 1 1 22344578999999998888776666554 47789988
Q ss_pred ccCCCCCchH-HHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhh
Q 012965 275 SPNDEEIPHG-FIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSL 353 (452)
Q Consensus 275 ~~~~~~~~~~-~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (452)
.++.++.... .......+...+.++++|+++||+|+++. +..+.....+........ .... ++.+ .+.
T Consensus 279 ~~~~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~v--l~~~~i~~~i~~~~~~l~-lp~~----~~~~----~~~ 347 (462)
T PRK15034 279 AKTQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRV--TLINFIFMAIFSALLFLT-LPGT----GSGN----FIA 347 (462)
T ss_pred HHHHcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHH--HHHHHHHHHHHHHHHHHH-hccc----cccH----HHH
Confidence 8776543222 22333457788889999999999998873 444443333332221111 1100 0011 124
Q ss_pred HHHHHHHHHHHhhchhhHHHHHHhhcCCc
Q 012965 354 QLLGFCTFEACVGIFWPSIMKMRSQYIPE 382 (452)
Q Consensus 354 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 382 (452)
....++...++.|..+...+-++.+.+|+
T Consensus 348 ~~~~~~~l~~~~G~gngsvfk~ip~~f~~ 376 (462)
T PRK15034 348 FYAVFMGLFLTAGLGSGSTFQMIAVIFRQ 376 (462)
T ss_pred HHHHHHHHHHHhcccchHHHHhhHHHHhh
Confidence 44555555566677777777788887774
No 53
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.94 E-value=3.1e-24 Score=205.71 Aligned_cols=362 Identities=11% Similarity=0.122 Sum_probs=213.6
Q ss_pred chhhHHHHHHHHHHHHhhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHH
Q 012965 36 NSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILS 115 (452)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~ 115 (452)
+|......+...+...+++...++++.+.+|+|.|+++.|++.+...+...+++++.|+++||+||||++..+..+.+++
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~ 91 (402)
T TIGR00897 12 PLNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVG 91 (402)
T ss_pred CchhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 33333445555566667777777777888999999999999988888888899999999999999999999999988876
Q ss_pred H-HH---hc-CccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHH-HHHHhhh
Q 012965 116 C-IT---KH-SPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVA-ILSGLFG 186 (452)
Q Consensus 116 ~-l~---~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~-~~~~~l~ 186 (452)
. ++ +. .++++.+++.|+++|++.+...+.... .+.+. ++|++..+..+.. ..+|. .+++.++
T Consensus 92 ~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~-~~~~~~~~~~~g~~~g~~~~~--------~~~g~~~~g~~~~ 162 (402)
T TIGR00897 92 HAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLV-WVVYNTKQDNLSSAVGWFWAV--------YSIGIGVFGSYYS 162 (402)
T ss_pred HHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHH-HHHHhCCHHHHHHHHHHHHHH--------HHHHHHHHHHHHH
Confidence 4 32 33 368889999999999998877666545 44443 5556655533322 23333 3455566
Q ss_pred hhhhcccCCCcchhhHHHHHHHHHHHHHHHhccccccCCC-CcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhh
Q 012965 187 NLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDP-SESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYT 265 (452)
Q Consensus 187 ~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (452)
+.+.+..+| +..++.......+...+.....++.++++ +++++..++..+..+.++|+|+++.......+.....+.
T Consensus 163 ~~l~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (402)
T TIGR00897 163 SYAIPAFGE--MNTLWSALAFVLTGGVIALFSNKDIFTPQHMQTREKFSELGKAATILFTNPNVLLGGMVRIINTIGLFG 240 (402)
T ss_pred Hhcccccch--HHHHHHHHHHHHHHHHHHHhccCCCCCcccccCCcchhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHH
Confidence 665544443 22222222111111112221222221111 111111222334456778888888776665554444444
Q ss_pred hhhhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 012965 266 FVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNV 342 (452)
Q Consensus 266 ~~~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (452)
...|.|.|.++ .+.+. +.......+++.++++..|+++||++||+. ..........+.............+
T Consensus 241 -~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~-~~~~~~l~~~~~~~~l~~~~~~~~~--- 314 (402)
T TIGR00897 241 -FAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNT-VRWFGGVGCGIFTLALYYIPQHFGH--- 314 (402)
T ss_pred -HHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhH-HHHHHHHHHHHHHHHHHHHHHccCC---
Confidence 47788888764 55544 455566678899999999999999998773 1111222222222222111111000
Q ss_pred CCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhhh------hHHHHHHHhccccCCchHHH
Q 012965 343 KSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPL------NIFVCVVLYNVDAFPITVMF 416 (452)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~------~~~~~~~l~~~~~~~~~~~~ 416 (452)
+ .+...+..++.|++.+...+ ......|..| ++|++++|+.+... ++.+++.+.+.. +....+
T Consensus 315 ---~----~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~--g~~~~~ 383 (402)
T TIGR00897 315 ---S----FAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFF--GAIGVV 383 (402)
T ss_pred ---c----HHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--chHHHH
Confidence 0 12344556666776665444 3455667655 57999999888752 334555555553 444444
Q ss_pred HHHHHHHHH
Q 012965 417 GMCSIFLLV 425 (452)
Q Consensus 417 ~~~~~~~~~ 425 (452)
..++++.++
T Consensus 384 ~~~a~~~~i 392 (402)
T TIGR00897 384 WIFAALYVV 392 (402)
T ss_pred HHHHHHHHH
Confidence 444444433
No 54
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.94 E-value=3.9e-25 Score=217.82 Aligned_cols=319 Identities=15% Similarity=0.130 Sum_probs=216.8
Q ss_pred hhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHH
Q 012965 52 GDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIG 130 (452)
Q Consensus 52 ~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~ 130 (452)
......+.+|.+.+++|.+..+.+++.+...+...++.++.|+++||+|||+++..+.++..++. ++++++|++.+++.
T Consensus 17 ~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 96 (485)
T TIGR00711 17 DSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIF 96 (485)
T ss_pred HHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHH
Confidence 34444788899999999999999999888888888888999999999999999999999999876 77899999999999
Q ss_pred HHHHHhHhhhhhhhhhhhhhhhcc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHH
Q 012965 131 RILGGIATSLLFSAFESWLVAEHN---KRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACF 207 (452)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~e~~---~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~ 207 (452)
|+++|++.+...+...+ ++.|.. +|++..+. ...+..+|..+++.+++.+.++ ++||+.|++.+.+
T Consensus 97 ~~~~G~~~~~~~~~~~~-~i~~~~~~~~r~~~~~~--------~~~~~~~g~~~g~~~~~~l~~~--~~w~~~f~~~~~~ 165 (485)
T TIGR00711 97 RVIQGFGGGPLIPLSFS-TLLNIYPPEKRGRAMAI--------WGLTVLVAPALGPTLGGWIIEN--YHWRWIFLINVPI 165 (485)
T ss_pred HHHHHhhhhhHHHHHHH-HHHHHCCHHHHHHHHHH--------HHHHHHHHhhhhhccHhHhccC--cCceehhhhhhHH
Confidence 99999999998888766 777773 33333332 2234456667777777777754 4566677776665
Q ss_pred HHHHHHHHHhccccccCCCCcchhHH----------------------------------------------HHHHH---
Q 012965 208 LAIGMVIILSSWTENYGDPSESKDLL----------------------------------------------TQFRG--- 238 (452)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~--- 238 (452)
.++.........||++++++++.+.. ++.++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (485)
T TIGR00711 166 GIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNP 245 (485)
T ss_pred HHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 55554444434454332211110000 00000
Q ss_pred -hhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchh
Q 012965 239 -AAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVES 314 (452)
Q Consensus 239 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~ 314 (452)
...+.+++++++.......+.....+. ...+.|.|+++..+.++ +.......++.+++.++.+++.||++||+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~-- 322 (485)
T TIGR00711 246 LVDLRLFKYRNFTIGCVYMSLLGLGLYG-SFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRK-- 322 (485)
T ss_pred ccCHHHHcCCChHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHH--
Confidence 011345666666665555544444443 46778888877666654 56667777889999999999999999877
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhh
Q 012965 315 YMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (452)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (452)
.+..+..+..+........... + .+ .+.......+.|++.+...+.......+..|+++|+++.|+.+.
T Consensus 323 ~~~~g~~~~~~~~~~~~~~~~~-~------~~----~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 391 (485)
T TIGR00711 323 LVTIGLILYAVGFYWRAFTFTP-D------TP----FLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNF 391 (485)
T ss_pred HHHHHHHHHHHHHHHHhccCCC-C------CC----HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHH
Confidence 2444444443333332211111 0 00 12345557788888888887777888888999999999988776
Q ss_pred h
Q 012965 395 P 395 (452)
Q Consensus 395 ~ 395 (452)
.
T Consensus 392 ~ 392 (485)
T TIGR00711 392 T 392 (485)
T ss_pred H
Confidence 4
No 55
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.94 E-value=1.7e-24 Score=213.24 Aligned_cols=344 Identities=12% Similarity=-0.026 Sum_probs=198.8
Q ss_pred CCCccchhhHHHHHHHHHHHHhhhhh----hhhHHHHHhhc-----CCCcchhHHHHHHHHhhhhhccccccccccccCc
Q 012965 31 TSSAFNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTY-----GFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGR 101 (452)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~p~l~~i~~~~-----g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Gr 101 (452)
++.++.++++..+.++.+..+.++++ +...|.+.+++ +.+..+.+++.+...+...+++++.|+++||+||
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Gr 85 (502)
T TIGR00887 6 DTAPFGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGR 85 (502)
T ss_pred hccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 44567778888887778887877777 44455544432 3445566777777777777888999999999999
Q ss_pred chHHHHHHHHHHHHH-HHhcCcc------HHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHH
Q 012965 102 KRACVTYCLTYILSC-ITKHSPQ------YKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAI 171 (452)
Q Consensus 102 r~~l~~~~~~~~i~~-l~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~ 171 (452)
|+++..+.++..++. +++++++ ++.++++|+++|++.|...+.... ++.|. ++|++..+.... ..
T Consensus 86 r~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~-~~~e~~p~~~Rg~~~~~~~~----~~ 160 (502)
T TIGR00887 86 KRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAI-ITSEFATKKWRGAMMAAVFA----MQ 160 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhcChhhHHHHHHHHHH----HH
Confidence 999999999998875 5566655 789999999999999999888855 88888 445554443333 33
Q ss_pred HHHHHHHHHHHHhhhhhhhc-----------------ccCCCcchhhHHHHHHHHHHHHHHHhccccccC------CCCc
Q 012965 172 FLGNGLVAILSGLFGNLLVD-----------------SFSLGPVAPFDAAACFLAIGMVIILSSWTENYG------DPSE 228 (452)
Q Consensus 172 ~~g~~ig~~~~~~l~~~l~~-----------------~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 228 (452)
.+|..+|+.++..+.....+ ..+|+||.++.+.++..++..+.. +..||+++ ++++
T Consensus 161 ~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~-~~lpESpr~l~~~~~~~~ 239 (502)
T TIGR00887 161 GFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFR-LTIPETPRYTADVAKDVE 239 (502)
T ss_pred HHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHH-HhCCCCHHHHHHhCcchH
Confidence 34444444444333221110 124689999977766655544443 36677532 1111
Q ss_pred -chhHHH----------------------HHHHhhHHhhcc---hhHHHH---HHHHHhhhchhhhhhhhhccccccCCC
Q 012965 229 -SKDLLT----------------------QFRGAAVAIASD---EKIALL---GAIQSLFEGSMYTFVFLWTPALSPNDE 279 (452)
Q Consensus 229 -~~~~~~----------------------~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~ 279 (452)
+.+..+ +.+..+++++++ ++.+.. .....+.....+.....|.|.++++ .
T Consensus 240 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~ 318 (502)
T TIGR00887 240 QAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-I 318 (502)
T ss_pred HHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-H
Confidence 000000 001123334331 121111 1111122222222245667776642 2
Q ss_pred CCch---H-----------H-HHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCC
Q 012965 280 EIPH---G-----------F-IFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKS 344 (452)
Q Consensus 280 ~~~~---~-----------~-~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (452)
|.+. + . ......++.+++.++.++++||+|||+. +..+..+.++++........... .
T Consensus 319 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~--l~~~~~~~~~~~~~l~~~~~~~~-~---- 391 (502)
T TIGR00887 319 GYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPI--QLMGFFILTVLFFVLGFAYNHLS-T---- 391 (502)
T ss_pred cCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhH--HHHHHHHHHHHHHHHHHHHHhcc-h----
Confidence 2211 0 0 1223335667788999999999999983 44444444444433332221100 0
Q ss_pred CCcccchhhHHHHHHHHHHH-hhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 345 GGISFSGSLQLLGFCTFEAC-VGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
. .......+.... .....+..+.+..|.+|++.|+++.|+.+..
T Consensus 392 ---~----~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~ 436 (502)
T TIGR00887 392 ---H----GFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAAS 436 (502)
T ss_pred ---h----HHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHH
Confidence 0 111111121222 2224467788899999999999999987764
No 56
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.94 E-value=7.5e-24 Score=205.46 Aligned_cols=357 Identities=18% Similarity=0.199 Sum_probs=239.0
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHH-H-H--
Q 012965 42 YLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILS-C-I-- 117 (452)
Q Consensus 42 ~~~~~~~~~~~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~-~-l-- 117 (452)
+.....+..++++++...++-+..+..-|+..++.+.....+...+.++++|.++||++|||+++.+.++.++. . +
T Consensus 15 lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~ 94 (524)
T PF05977_consen 15 LWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAV 94 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHH
Confidence 45556777888888855555566667778889999999999999999999999999999999999998877653 2 2
Q ss_pred Hhc--CccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCC
Q 012965 118 TKH--SPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSL 195 (452)
Q Consensus 118 ~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~ 195 (452)
... ..+.+.+++.-++.|++.+...|+.++ ++.|.-+|+...... ...+...++...+||.+++.+... .
T Consensus 95 l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A-~ip~lV~~~~L~~A~-al~s~~~niar~iGPalgG~Lva~----~-- 166 (524)
T PF05977_consen 95 LAFFGLLSPWLLLILTFLLGIGSAFFNPAWQA-IIPELVPKEDLPAAN-ALNSISFNIARIIGPALGGILVAF----F-- 166 (524)
T ss_pred HHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccHhhHHHHH-HHHHHHHHHHHhccchHHHHHHHH----H--
Confidence 122 357889999999999999999999877 888774444433322 234444455555555554444332 2
Q ss_pred CcchhhHHHHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccc
Q 012965 196 GPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALS 275 (452)
Q Consensus 196 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 275 (452)
+-...|.+.++..++....+....++.++++.++++..++.++..+.+.++|..........++...... ....+|.+.
T Consensus 167 G~~~~f~inalsfl~~i~~l~~~~~~~~~~~~~~e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a-~~aLlPl~a 245 (524)
T PF05977_consen 167 GAAAAFLINALSFLISILALLRWKPPPPPSSLPRERFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASA-VWALLPLFA 245 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccccccccccchhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhH-HHHhhhHHH
Confidence 3345677666655554444332222222223333445566677777777777766554433333333222 345678887
Q ss_pred cCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchh
Q 012965 276 PNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGS 352 (452)
Q Consensus 276 ~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (452)
++..+.++ |.+.+..+++.++|.++.+++.+|+++++ .+..+....++......+.... +
T Consensus 246 ~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~--lv~~~~~~~a~~~~~lal~~~~---------------~ 308 (524)
T PF05977_consen 246 RDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRR--LVLLASLLFALALLLLALSPSF---------------W 308 (524)
T ss_pred HHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcch--hhHHHHHHHHHHHHHHhcchHH---------------H
Confidence 76666544 78888999999999999999999987766 3445555555544444433333 4
Q ss_pred hHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh------hhHHHHHHHhccccCCchHHHHHHHHHHHHH
Q 012965 353 LQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGMCSIFLLVA 426 (452)
Q Consensus 353 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 426 (452)
...+..++.|++.........+..++..|++.||+++|++++. .+..+.+.+.+. .+....+.++++..++.
T Consensus 309 ~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~--~g~~~al~~a~~~lll~ 386 (524)
T PF05977_consen 309 LALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADH--FGVRTALLIAGAALLLS 386 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHH
Confidence 6677788888888888888999999999999999999988764 334555555555 34444444444443333
No 57
>TIGR00895 2A0115 benzoate transport.
Probab=99.94 E-value=1.5e-24 Score=208.00 Aligned_cols=330 Identities=20% Similarity=0.205 Sum_probs=207.5
Q ss_pred chhhHHHHHHHHHHHHhhhhh----hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHH
Q 012965 36 NSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLT 111 (452)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~----~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~ 111 (452)
++.++..+..+....+.++++ .+..|.+.+++|.++.+.+++.+...+...+++++.|+++||+|||+.+..+..+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 91 (398)
T TIGR00895 12 SRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILL 91 (398)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHH
Confidence 344555444444444433332 6677888899999999999998888887888889999999999999999999988
Q ss_pred HHHHH-HHhcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 012965 112 YILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGN 187 (452)
Q Consensus 112 ~~i~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~ 187 (452)
.+++. +..++++++.+++.|++.|++.+...+...+ ++.|. ++|++..+.. . .+..+|..+++.+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~----~----~~~~~g~~~~~~~~~ 162 (398)
T TIGR00895 92 FSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNA-LVSEYAPKRFRGTAVGLM----F----CGYPIGAAVGGFLAG 162 (398)
T ss_pred HHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHH-HHHHHcCHHhhchhHhhH----h----hHHHHHHHHHHHHHH
Confidence 88876 6688899999999999999999998888766 77776 3455544422 2 233455555556666
Q ss_pred hhhcccCCCcchhhHHHHHHHHHHHHHHHhccccccCC---C--Ccc----------------------hhHHHHHHHhh
Q 012965 188 LLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGD---P--SES----------------------KDLLTQFRGAA 240 (452)
Q Consensus 188 ~l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~----------------------~~~~~~~~~~~ 240 (452)
.+.+. ++|+..+.+.+.+..+.........||+++. + ++. ++..++.++..
T Consensus 163 ~l~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (398)
T TIGR00895 163 WLIPV--FGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVF 240 (398)
T ss_pred HHhhc--ccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHH
Confidence 65544 3556667666544444433333344443210 0 000 00000001111
Q ss_pred HHhhcc---hhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchh
Q 012965 241 VAIASD---EKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVES 314 (452)
Q Consensus 241 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~ 314 (452)
+..+++ ++.+.......+.... +.....|.|.+.+ ..+.+. +.......++.+++.++.+++.||+++|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-- 316 (398)
T TIGR00895 241 KALFQGKTARITVLLWLLYFMLLVG-VYFLTNWLPKLMV-ELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRV-- 316 (398)
T ss_pred HHHhcchhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHH--
Confidence 112222 2222222222222222 3334667774443 334433 56667778889999999999999999874
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhh
Q 012965 315 YMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (452)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (452)
......+.++........... .+......++.+++.+...+..+++..|.+|++.|+++.|+.+.
T Consensus 317 -~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 381 (398)
T TIGR00895 317 -TALLLLLGAVFAVLVGSTLFS--------------PTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIG 381 (398)
T ss_pred -HHHHHHHHHHHHHHHHHHhhC--------------HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Confidence 333333333333222221111 02456667788888888889999999999999999999988776
Q ss_pred h
Q 012965 395 P 395 (452)
Q Consensus 395 ~ 395 (452)
.
T Consensus 382 ~ 382 (398)
T TIGR00895 382 I 382 (398)
T ss_pred H
Confidence 4
No 58
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.94 E-value=6.4e-24 Score=205.79 Aligned_cols=334 Identities=13% Similarity=0.081 Sum_probs=194.2
Q ss_pred hhHHHHHHHHHHHHhhhhh----hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHH
Q 012965 38 FKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYI 113 (452)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~----~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~ 113 (452)
.++..+....+.......+ ....|.+. +.|+|+++.++..+...+...++.++.|+++||+|||+++..+.++.+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~ 102 (438)
T TIGR00712 24 LRWQVFLGIFFGYAAYYLVRKNFALAMPYLV-EQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSA 102 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHhhhHHHH-HcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHH
Confidence 3344444444444443332 23344444 469999999999999888888999999999999999999999988888
Q ss_pred HHH-HHhcC----ccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 012965 114 LSC-ITKHS----PQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLF 185 (452)
Q Consensus 114 i~~-l~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l 185 (452)
++. +++.. ++++.+.+.|++.|++.+...+.... .+.|+ ++|++..+. .+.. ..+|..+++.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~-~i~~~~~~~~rg~~~~~----~~~~----~~~g~~~~~~l 173 (438)
T TIGR00712 103 AVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGR-TMVHWWSQSERGTIVSI----WNCA----HNIGGGIPPLL 173 (438)
T ss_pred HHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHH-HHHHhcCcccchhHHHH----HHHH----HHhHhHHHHHH
Confidence 875 44443 56778889999999999988777655 66666 344554442 2222 33444444444
Q ss_pred hhhhhcccCCCcchhhHHHHHHHHHHHHHHHhccccccCCC---C-c--------c--hhHHH--HHHHh-hHHhhcchh
Q 012965 186 GNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDP---S-E--------S--KDLLT--QFRGA-AVAIASDEK 248 (452)
Q Consensus 186 ~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~---~-~--------~--~~~~~--~~~~~-~~~~~~~~~ 248 (452)
.+...+ ...+||..|++.+++.++..+......||+++++ + + + ++..+ +.++. .+..+|+++
T Consensus 174 ~~~~~~-~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (438)
T TIGR00712 174 VLLGMA-WFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKL 252 (438)
T ss_pred HHHHHH-HhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccCch
Confidence 333222 1236778888877666654444333344432110 0 0 0 00000 01111 123577888
Q ss_pred HHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHH
Q 012965 249 IALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSV 325 (452)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 325 (452)
++.......+.....+. ...|.|.|+++..+.+. +.......+.+++++++.+++.||+++++.. . .+......
T Consensus 253 ~~~~~~~~~~~~~~~~~-~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~-~-~~~~~~~~ 329 (438)
T TIGR00712 253 LWYIAIANVFVYLLRYG-VLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRG-A-TGVFFMTL 329 (438)
T ss_pred HHHHHHHHHHHHHHHHH-HHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccc-H-HHHHHHHH
Confidence 87776665555544444 46789999987666544 5666777788999999999999999654321 2 22111111
Q ss_pred HHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 326 SLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
............. .+. +......+..+++.............|.+|++.|++++|+.+..
T Consensus 330 ~~~~~~~~~~~~~------~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 389 (438)
T TIGR00712 330 VTIAVIVYWMNPA------GNP----LVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLF 389 (438)
T ss_pred HHHHHHHHHhcCC------Cch----HHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchH
Confidence 1111111111100 000 12222233333332222222345678999999999999987653
No 59
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.94 E-value=1.2e-24 Score=206.29 Aligned_cols=324 Identities=14% Similarity=0.122 Sum_probs=202.7
Q ss_pred HhhhhhhhhHHH-HHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCc-cHHHH
Q 012965 51 AGDWLQGPYVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSP-QYKIL 127 (452)
Q Consensus 51 ~~~~~~~p~l~~-i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~-~~~~l 127 (452)
.......|++|. +.+++|+|+.+.+++.+...+...+.+++.|+++||+|||+.+..+.++..++. ++++++ +++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~ 94 (366)
T TIGR00886 15 SVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVL 94 (366)
T ss_pred HHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 333444888885 889999999999999999888888999999999999999999999999998876 668888 99999
Q ss_pred HHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccc----CCCcchh
Q 012965 128 MIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF----SLGPVAP 200 (452)
Q Consensus 128 ~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~----~~~~~~~ 200 (452)
++.|+++|++.+.. +...+ ++.|+ ++|++..+.. .....+|..+++.+++.+.....+.. ..+||+.
T Consensus 95 ~~~~~~~g~~~~~~-~~~~~-~~~~~~~~~~r~~~~~~~----~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~ 168 (366)
T TIGR00886 95 LLLRLFIGIAGGSF-ASCMP-WISFFFPKKIQGTALGLA----AGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWA 168 (366)
T ss_pred HHHHHHHHHhchhh-HhHHH-HHHHhcCHhhhhHHHHHH----HHHhHHHHHHHHHHHHHHHHHHHhcccccccccccch
Confidence 99999999986654 44445 67776 3455544433 22334455566666655554332211 2245666
Q ss_pred h-HHHHHHHHHHHHHHHhccccccCCCCcchh-HH--------HHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhh
Q 012965 201 F-DAAACFLAIGMVIILSSWTENYGDPSESKD-LL--------TQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLW 270 (452)
Q Consensus 201 f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (452)
+ ...+.+..+...+.....+|++++++++++ .. ++..+...+.+++|+++.............+. ...+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 247 (366)
T TIGR00886 169 FVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFKGARWSVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLG-VSSI 247 (366)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCCcccccchhcccccccccccchhHHHHHHHHhccchhhHHHHHHHHHHHHHH-HHHH
Confidence 6 332333332222222233332221111110 00 00111344567778877766555544444333 4677
Q ss_pred ccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCc
Q 012965 271 TPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGI 347 (452)
Q Consensus 271 ~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (452)
.|.|.++..+.+. +.......+.+++++++.+++.||+|+|+. ...................... .+
T Consensus 248 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~--~~~~~~~~~~~~~~~~~~~~~~-------~~- 317 (366)
T TIGR00886 248 FAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARK--LLMSFLGVAMGAFLVVLGLVSP-------LS- 317 (366)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchh--HHHHHHHHHHHHHHHHhcCCCc-------ch-
Confidence 8888877666544 455666778889999999999999998873 3333333222222222111110 00
Q ss_pred ccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 348 SFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 348 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
.+.......+..+..+...+..++...|..| +++++++|+.+..
T Consensus 318 ---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~ 361 (366)
T TIGR00886 318 ---LAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAI 361 (366)
T ss_pred ---HHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHh
Confidence 1233445555666777777778888888887 5789999887654
No 60
>TIGR00898 2A0119 cation transport protein.
Probab=99.94 E-value=1.8e-24 Score=214.04 Aligned_cols=309 Identities=13% Similarity=0.034 Sum_probs=198.0
Q ss_pred hhHHHHHhhcCCC---cchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHH
Q 012965 58 PYVYYLYSTYGFG---KGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRIL 133 (452)
Q Consensus 58 p~l~~i~~~~g~s---~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l 133 (452)
+..+.+.+|+|++ ..+.+++.+..+++..+++++.|+++||+|||+++..+.++.+++. ++++++|++.+++.|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 5667888999999 8889999888888888999999999999999999999999998876 66899999999999999
Q ss_pred HHhHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHH
Q 012965 134 GGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMV 213 (452)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~ 213 (452)
.|++.+...+.... ++.|..+++++... ......+..+|.++++.++..+. +||..+.+.++..++..+
T Consensus 190 ~G~~~~~~~~~~~~-~~~e~~~~~~r~~~-----~~~~~~~~~~g~~~~~~~~~~~~-----~wr~~~~~~~i~~~~~~~ 258 (505)
T TIGR00898 190 VGMGIGGIWVQAVV-LNTEFLPKKQRAIV-----GTLIQVFFSLGLVLLPLVAYFIP-----DWRWLQLAVSLPTFLFFL 258 (505)
T ss_pred HHhhccchHHHHHH-HhheecChhhhHHH-----HHHHHHHHHHHHHHHHHHHHHhh-----HHHHHHHHHHHHHHHHHH
Confidence 99999998888856 88887333322221 11123344556666666554433 267778777666655544
Q ss_pred HHHhccccccC------CCCcchhHH---------------------HH---H--HHhhHHhhcchhHHHHHHHHHhhhc
Q 012965 214 IILSSWTENYG------DPSESKDLL---------------------TQ---F--RGAAVAIASDEKIALLGAIQSLFEG 261 (452)
Q Consensus 214 ~~~~~~~~~~~------~~~~~~~~~---------------------~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (452)
.. ...||+++ +.+++++.. ++ . +...++++++|+.+...+...+...
T Consensus 259 ~~-~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 337 (505)
T TIGR00898 259 LS-WFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWF 337 (505)
T ss_pred HH-HhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHH
Confidence 44 35566432 111110000 00 0 0133456666766555444332222
Q ss_pred hhhhhhhhhccccccCCCCCchHHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 012965 262 SMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSN 341 (452)
Q Consensus 262 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (452)
.. ....+..+.+. +..+.+........++..+++.++.+++.||+|||+. +.....+.++.++........
T Consensus 338 ~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~--~~~~~~~~~~~~l~~~~~~~~----- 408 (505)
T TIGR00898 338 TT-AFSYYGLVLDL-GNLGGNIYLDLFISGLVELPAKLITLLLIDRLGRRYT--MAASLLLAGVALLLLLFVPVD----- 408 (505)
T ss_pred HH-HHHHHHHhccc-cccCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH--HHHHHHHHHHHHHHHHHcCCC-----
Confidence 21 11111122222 2333444455556677888999999999999998873 444444444444433322111
Q ss_pred cCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 342 VKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
. .+......++.+++.+..++..+.+.+|.+|++.|++++|+.+..
T Consensus 409 ----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~ 454 (505)
T TIGR00898 409 ----L----YFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTM 454 (505)
T ss_pred ----c----hHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHH
Confidence 0 023344455566666777788899999999999999999887764
No 61
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.93 E-value=3.6e-24 Score=209.46 Aligned_cols=310 Identities=12% Similarity=-0.002 Sum_probs=194.6
Q ss_pred hcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HH--hcCccHHHHHHHHHHHHhHhhhhh
Q 012965 66 TYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT--KHSPQYKILMIGRILGGIATSLLF 142 (452)
Q Consensus 66 ~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~--~~~~~~~~l~~~r~l~G~~~~~~~ 142 (452)
|++++..+.|.+.+.......+++++.|+++||+|||+++..+.++.+++. ++ +...+++.+++.|+++|++.+...
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~ 149 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVS 149 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccch
Confidence 789999999999888888888999999999999999999999999888865 44 334678889999999999999999
Q ss_pred hhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHhccccc
Q 012965 143 SAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTEN 222 (452)
Q Consensus 143 ~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 222 (452)
+.... ++.|+.+++++.. .......+..+|..+++.+++.+.+.. .+||.+|.+.++..++..++.....+|+
T Consensus 150 ~~~~~-~~~~~~~~~~r~~-----~~~~~~~~~~~g~~i~~~l~~~l~~~~-~gw~~~f~i~~~~~~~~~~~~~~~~~~~ 222 (465)
T TIGR00894 150 PATHK-IIVKWAPPKERSR-----LLGMSTSGFQLGTFIFLPISGWLCESW-GGWPMIFYVFGIVGCAWSLLWFVFPADD 222 (465)
T ss_pred hhHHH-HHHhcCCHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCCeehhhhhHHHHHHHHHHHHHhcCC
Confidence 98866 8888844333332 112233345566677777777766431 2667788877766655444333233333
Q ss_pred cCCCCc-chhHHHHH-------------HHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---HH
Q 012965 223 YGDPSE-SKDLLTQF-------------RGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GF 285 (452)
Q Consensus 223 ~~~~~~-~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~ 285 (452)
++++++ .++.++.. +...++++++++++.............+. ...|.|.|+++..+.+. +.
T Consensus 223 p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lp~~l~~~~g~s~~~~g~ 301 (465)
T TIGR00894 223 PSIHPCISKFEKKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTI-LPTYLPTFISWVLRVSGKENGL 301 (465)
T ss_pred cccCCCCCHHHHHHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCcChHHhHH
Confidence 221111 11110000 11255677788888777666665555554 57899999877666644 56
Q ss_pred HHHHHHHHHHHHhHHHHHHhccCCCCchhH-H-H--HHHHHHHHHHHHHH-HHhhhcCCCCcCCCCcccchhhHHHHHHH
Q 012965 286 IFATFMLASMLGSSLASRLMARSPPRVESY-M-Q--IVFVVSSVSLLLPI-VTSFLVAPSNVKSGGISFSGSLQLLGFCT 360 (452)
Q Consensus 286 ~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~-~-~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (452)
..+...++..++.++.|+++||.++|+... . . ....+......... ....... + .+..+....+
T Consensus 302 ~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~----~~~~~~~~~l 370 (465)
T TIGR00894 302 LSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSA-------A----FYLTIIILTL 370 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCC-------c----hHHHHHHHHH
Confidence 667778889999999999999876443110 0 0 11111111111111 1111100 0 0123344444
Q ss_pred HHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 361 FEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 361 ~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
.+.+.+...+..+....|..|+ .+|.+.|+.+..
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~ 404 (465)
T TIGR00894 371 ANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLP 404 (465)
T ss_pred HHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHH
Confidence 4555554555566666677766 789888888775
No 62
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.93 E-value=2.3e-24 Score=194.55 Aligned_cols=346 Identities=19% Similarity=0.164 Sum_probs=230.7
Q ss_pred hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcC---ccHHHHHHHHH
Q 012965 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS---PQYKILMIGRI 132 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~---~~~~~l~~~r~ 132 (452)
+|..+.+.+|+|+|++|.+++.....+.+.+...+.|.+.||+|.|++...+.++..+-+ ..+++ ++++.+++.++
T Consensus 34 s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gl 113 (417)
T COG2223 34 SPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGL 113 (417)
T ss_pred HHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHH
Confidence 777778889999999999999999999999999999999999999999999999998854 44554 45569999999
Q ss_pred HHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCC-CcchhhHHHHHHH
Q 012965 133 LGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSL-GPVAPFDAAACFL 208 (452)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~-~~~~~f~~~~~~~ 208 (452)
+.|++.+... +..+ +++++ +++|...++ +. .-++|..+...++|.+... .++ .|+....+..+..
T Consensus 114 l~G~~GasFa-v~m~-~~s~~fP~~~qG~AlGI----~g-~GN~G~av~q~~~P~v~~~----~g~~~w~~~~~i~~~~l 182 (417)
T COG2223 114 LLGLAGASFA-VGMP-NASFFFPKEKQGLALGI----AG-AGNLGVAVAQLVAPLVAVA----FGFLAWRNVAGIYVVAL 182 (417)
T ss_pred HHhcccceeh-cccc-cccccCChhhhhHHHHH----hc-cccccHHHHHHHHHHHHHH----HhhHHHHHHHHHHHHHH
Confidence 9999977664 4446 77777 455555553 33 4445566666666665544 332 2555555555555
Q ss_pred HHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---HH
Q 012965 209 AIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GF 285 (452)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~ 285 (452)
++..+..+....+.++.+++.++... ...+.+.++++.|.+++.+....+.+.. ...++|.|++++++.+. +.
T Consensus 183 ~v~~v~~~~~~~d~p~~r~~~~~~~~---~~~~~v~~~~~~W~lsllY~~tFG~Fvg-fs~~l~~~~~~~fg~~~~~Ag~ 258 (417)
T COG2223 183 AIAAVLAWLGMNDVPEHRASVKPQLP---AQLKAVFSNKDTWLLSLLYFATFGGFVG-FSAYLPMYLVTQFGLSPVTAGL 258 (417)
T ss_pred HHHHHHHHHHhCCChhhhccccccch---hHHHHHhcCcchHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCChhhHHH
Confidence 55444444343333221111111110 4556778899999999888877777666 59999999999888865 56
Q ss_pred HHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHh
Q 012965 286 IFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACV 365 (452)
Q Consensus 286 ~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 365 (452)
........+.+.++.+|+++||+|.+|. +...+..+.++............. ....+.....++...+..
T Consensus 259 ~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv--~~~~f~~~~~~~~~l~~~~~~~~~--------~~~~~~~~~~~l~l~~~~ 328 (417)
T COG2223 259 IAFLFPLIGALARPLGGWLSDRIGGRRV--TLAVFVGMALAAALLSLFLTGFGH--------GGSFVVFVAVFLALFVFA 328 (417)
T ss_pred HHHHHHHHHHHHHhccchhhhhccchhH--HHHHHHHHHHHHHHHHcccccccc--------CcchHHHHHHHHHHHHHh
Confidence 6667778889999999999999998883 555555555555554433322110 111134555566667777
Q ss_pred hchhhHHHHHHhhcCCcccccchhhhhhhhhhH------HHHHHHhccccCCchHHHHHHHHHHHHHHHH
Q 012965 366 GIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNI------FVCVVLYNVDAFPITVMFGMCSIFLLVASVL 429 (452)
Q Consensus 366 ~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (452)
|..+...+.++..++|++ .|.+.|+.....+. ..-+...+.++ .+...+.......+++...
T Consensus 329 G~GnGsvfk~Ip~if~~~-~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg-~~~~~f~~~~~~~~~a~v~ 396 (417)
T COG2223 329 GLGNGSVFKMIPVIFPKE-TGAVTGIVGAIGGLGGFFLPLAFGVSLDLTG-SYTGAFMLLLAFYLVALVL 396 (417)
T ss_pred ccCcchheeechHHHHhh-hhHHHHHHHHhccccccchhHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHH
Confidence 777777888888888774 56677766654222 22233344444 4555555555444444443
No 63
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.93 E-value=5e-24 Score=204.01 Aligned_cols=330 Identities=17% Similarity=0.195 Sum_probs=194.1
Q ss_pred hhHHHHHhhcC--CCcchhHHHH-----HHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHH----
Q 012965 58 PYVYYLYSTYG--FGKGEIGQLF-----IAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYK---- 125 (452)
Q Consensus 58 p~l~~i~~~~g--~s~~~~g~~~-----~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~---- 125 (452)
+..+.+.+++. .++.+.+... ...++...+++++.|+++||+||||++..+.++..++. +++++++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (394)
T TIGR00883 14 FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGI 93 (394)
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHH
Confidence 33345555543 4455665433 33444445677889999999999999999999998876 678888875
Q ss_pred ----HHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc--ccCCC
Q 012965 126 ----ILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD--SFSLG 196 (452)
Q Consensus 126 ----~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~--~~~~~ 196 (452)
.+++.|+++|++.+...+.... ++.|. ++|++..+ ..+.+..+|..+++.++..+...+.+ ...++
T Consensus 94 ~~~~~~~~~r~l~G~~~~~~~~~~~~-~~~~~~~~~~r~~~~~----~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~ 168 (394)
T TIGR00883 94 WAPILLLLARLIQGFSLGGEWGGAAL-YLAEYAPPGKRGFYGS----FQQVGAPVGLLLAALTVLLLSYLLGDDALLEWG 168 (394)
T ss_pred HHHHHHHHHHHHHHhhccccccccHH-HhhhcCCcccchHHHH----HHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccc
Confidence 4889999999999998888756 77777 34444333 23333333443444333332221111 13578
Q ss_pred cchhhHHHHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchh--HHHHHHHHHhhhchhhhhhhhhcccc
Q 012965 197 PVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEK--IALLGAIQSLFEGSMYTFVFLWTPAL 274 (452)
Q Consensus 197 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~ 274 (452)
||.+|.+.+++.++..... ...||++++++++++ .++.+++.++..++++ ++.......+.... +.....+.|.+
T Consensus 169 w~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 245 (394)
T TIGR00883 169 WRIPFLVSAVLVLIGLYLR-RNLEETPVFEKAQEK-HKKKRGPIRETLTKHRKPFLLGLGLVIATTTT-FYLITTYLPTY 245 (394)
T ss_pred hHHHHHHHHHHHHHHHHHH-HhcCCChhHHHHHhc-cccccCCHHHHHHhchHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 8888887766655544332 244543321111110 0111222334444444 44443333333333 33356788888
Q ss_pred ccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHH-HHHHHHhhhcCCCCcCCCCcccc
Q 012965 275 SPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSL-LLPIVTSFLVAPSNVKSGGISFS 350 (452)
Q Consensus 275 ~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 350 (452)
.++..+.+. +.......+...++.++.+++.||+|||+. +.....+..... ......... . +
T Consensus 246 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~--~~~~~~~~~~~~~~~~~~~~~~-~-------~---- 311 (394)
T TIGR00883 246 LTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPV--LIIFTVLAALLAVPLLMALLDS-G-------S---- 311 (394)
T ss_pred HHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHH--HHHHHHHHHHHHHHHHHHHhcC-C-------c----
Confidence 865555543 455666678889999999999999998873 332222222221 111111111 0 0
Q ss_pred hhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhh-hh------hhHHHHHHHhcccc
Q 012965 351 GSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFR-IP------LNIFVCVVLYNVDA 409 (452)
Q Consensus 351 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~-~~------~~~~~~~~l~~~~~ 409 (452)
.+......++.+++.+...+..+++..|.+|++.|+++.|+.. .. .++.+++.+.+..+
T Consensus 312 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g 377 (394)
T TIGR00883 312 FTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTG 377 (394)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcC
Confidence 1244556677778888888889999999999999999887632 21 23455566666544
No 64
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.93 E-value=1.2e-23 Score=206.80 Aligned_cols=319 Identities=15% Similarity=0.125 Sum_probs=184.3
Q ss_pred hhhHHHHHhhcCCC--------cchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhc---CccH
Q 012965 57 GPYVYYLYSTYGFG--------KGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKH---SPQY 124 (452)
Q Consensus 57 ~p~l~~i~~~~g~s--------~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~---~~~~ 124 (452)
.+..+.+.++++.+ ..+.+++.+...+...+++++.|+++||+|||+++..+.++.+++. ++.+ ..++
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (481)
T TIGR00879 48 GGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSV 127 (481)
T ss_pred hhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 56666777777666 7889999999999888999999999999999999999999998875 4433 4456
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhh---hhhhcccCCCcc
Q 012965 125 KILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFG---NLLVDSFSLGPV 198 (452)
Q Consensus 125 ~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~---~~l~~~~~~~~~ 198 (452)
+.+++.|+++|++.+...+.... ++.|. ++|++..+.. +. +..+|..+++.++ .... ...+||
T Consensus 128 ~~~~~~r~l~G~~~~~~~~~~~~-~i~~~~~~~~r~~~~~~~----~~----~~~~G~~~~~~~~~~~~~~~--~~~~w~ 196 (481)
T TIGR00879 128 EMLIVGRVLLGIGVGIASALVPM-YLSEIAPKALRGALTSLY----QL----AITFGILVAYGFGSGKVSLN--NTLGWR 196 (481)
T ss_pred HHHHHHHHHHHhhhhHHHhHHHH-HHHccCChhhhhhhhhHH----HH----HHHHHHHHHHHHHHHhhcCC--CCccHH
Confidence 68999999999999999887755 78887 4455544422 22 2334455555554 3322 234677
Q ss_pred hhhHHHHHHHHHHHHHHHhccccccC------CCCcchhHHHH-----------HH-----------------HhhHHhh
Q 012965 199 APFDAAACFLAIGMVIILSSWTENYG------DPSESKDLLTQ-----------FR-----------------GAAVAIA 244 (452)
Q Consensus 199 ~~f~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-----------~~-----------------~~~~~~~ 244 (452)
+.|.+.+...++..... ...||++. +.++.++..++ .+ +..++.+
T Consensus 197 ~~f~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (481)
T TIGR00879 197 IPLGLQLIPAGLLFLGL-FFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLF 275 (481)
T ss_pred HHHHHHHHHHHHHHHHH-hcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHH
Confidence 88877555544443333 34555321 10000000000 00 0001111
Q ss_pred cc-----hhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHH
Q 012965 245 SD-----EKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYM 316 (452)
Q Consensus 245 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~ 316 (452)
+. ++.........+...........+.|.+.++ .+.+. +.......++.+++.++.+++.||++||+. +
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~--~ 352 (481)
T TIGR00879 276 SSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPL--L 352 (481)
T ss_pred hcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH--H
Confidence 11 1222222222222222223335556665543 23333 456666778889999999999999998873 4
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhch-hhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 317 QIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIF-WPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
..+..+..++............+ +.+.. ..........++..+.+.. .+....+..|.+|++.|++++|+.+..
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 427 (481)
T TIGR00879 353 LIGAAGMAICLFVLGILGASFVT----GSSKS-SGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAA 427 (481)
T ss_pred HHHHHHHHHHHHHHHHHhhcccC----Ccccc-hhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHH
Confidence 44444444433333221111000 00000 0012233333333344433 366778889999999999999887765
No 65
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.93 E-value=4.8e-24 Score=201.17 Aligned_cols=318 Identities=15% Similarity=0.123 Sum_probs=200.6
Q ss_pred hhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHH
Q 012965 56 QGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGG 135 (452)
Q Consensus 56 ~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~l~~~~~~~~~l~~~r~l~G 135 (452)
..|.+|.+.+|+|+|+++.|+..+...+...+++++.|+++||+||||++..+.++..++.+...+++.+.+++.|++.|
T Consensus 19 ~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 98 (355)
T TIGR00896 19 VGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIRSAPGTALLFAGTALIG 98 (355)
T ss_pred CcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 37899999999999999999999999998889999999999999999999999888877653227789999999999999
Q ss_pred hHhhhhhhhhhhhhhhhc--ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHH
Q 012965 136 IATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMV 213 (452)
Q Consensus 136 ~~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~ 213 (452)
++.+...+.... ++.|. ++|++..+ ..+.+.. +|..+++.++..+.+..+.+||..|...++..++...
T Consensus 99 ~g~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~----~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~ 169 (355)
T TIGR00896 99 VGIAIINVLLPS-LIKRDFPQRVGLMTG----LYSMALM----GGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL 169 (355)
T ss_pred HHHHHHhccchH-HHHHhCcchhhHHHH----HHHHHHH----HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH
Confidence 999987766644 66665 33333333 2333333 4444444444444443444578777665544433322
Q ss_pred HHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---HHHHHHH
Q 012965 214 IILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATF 290 (452)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~ 290 (452)
. ..|+.+++++++++. .+...++.+|+|+.+.......+.....+. ...|.|.+.++ .+.+. +...+..
T Consensus 170 ~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lp~~~~~-~g~~~~~~g~~~~~~ 241 (355)
T TIGR00896 170 A---WIPQVRRRVAANQTT---TRLTPVRIWRSPLAWQVTVFFGLQSGLYYS-LIGWLPAILIS-HGASAATAGSLLALM 241 (355)
T ss_pred H---HhhhhccccCCCCCC---CCCCCchhhcCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHHH-cCCCHHHHHHHHHHH
Confidence 2 223322211111110 011234566777777665544443344333 46788888865 35543 5677778
Q ss_pred HHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhh
Q 012965 291 MLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWP 370 (452)
Q Consensus 291 ~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 370 (452)
.++.++++++.+++.||+++|+. .+..+..+..++.......... .......+.|++.+...|
T Consensus 242 ~~~~i~~~~~~g~l~dr~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~l~g~~~g~~~~ 304 (355)
T TIGR00896 242 QLAQAASALLIPALARRVKDQRG-IVAVLAVLQLVGLCGLLFAPMH----------------GLWAWALVLGLGQGGAFP 304 (355)
T ss_pred HHHHHHHHHhHHHHHhhhccchH-HHHHHHHHHHHHHHHHHHhhhh----------------HHHHHHHHHHHhhhhHhH
Confidence 89999999999999999965442 2333333333333332222111 111245677888888888
Q ss_pred HHHHHHhhcCC-cccccchhhhhhhh------hhHHHHHHHhcc
Q 012965 371 SIMKMRSQYIP-EEARSTIMNFFRIP------LNIFVCVVLYNV 407 (452)
Q Consensus 371 ~~~~~~~~~~p-~~~r~~~~g~~~~~------~~~~~~~~l~~~ 407 (452)
...+...+..+ ++++++..++.+.. .++.+.+.+.+.
T Consensus 305 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~ 348 (355)
T TIGR00896 305 LALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDI 348 (355)
T ss_pred HHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777765554 55667777765532 244455555554
No 66
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.93 E-value=2e-24 Score=205.59 Aligned_cols=315 Identities=14% Similarity=0.089 Sum_probs=200.8
Q ss_pred hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHH
Q 012965 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G 135 (452)
.+..|.+.+++|.|..+.|++.+...+...+++++.|+++||+|||+++..+.++.+++. +++++++++.+++.|++.|
T Consensus 15 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 94 (379)
T TIGR00881 15 ALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNG 94 (379)
T ss_pred hhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 556678889999999999999999888888999999999999999999999999998876 6688999999999999999
Q ss_pred hHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhcccCCCcchhhHHHHHHHHHH
Q 012965 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSG-LFGNLLVDSFSLGPVAPFDAAACFLAIG 211 (452)
Q Consensus 136 ~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~-~l~~~l~~~~~~~~~~~f~~~~~~~~~~ 211 (452)
++.+...+...+ ++.|. ++|++..+..+. .. .+|..+++ .++..+.+ .++|+..|.+.+.+.++.
T Consensus 95 ~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~----~~----~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 163 (379)
T TIGR00881 95 IFQGMGWPPCGR-TVTKWFSRSERGTWVSFWNC----SH----NVGGGLLPPLVLFGIAE--LYSWHWVFIVPGIIAIIV 163 (379)
T ss_pred hhccccCCchHH-HHHHhcCHhhheeeEeehhc----cc----hhHHHHHHHHHHHHHHh--cCCchhHHHHHHHHHHHH
Confidence 999998888766 77776 445555553333 22 33444444 23333333 346677787776665554
Q ss_pred HHHHHhccccccCCC----------Ccc-------hhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhcccc
Q 012965 212 MVIILSSWTENYGDP----------SES-------KDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPAL 274 (452)
Q Consensus 212 ~~~~~~~~~~~~~~~----------~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 274 (452)
.+......||+++++ ++. ++..++.+...++.+++|.++...+...+....... ...+.|.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 242 (379)
T TIGR00881 164 SLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTG-ILDWSPLY 242 (379)
T ss_pred HHHHheeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 444443344322110 000 000011122345567778877766665555544443 46788888
Q ss_pred ccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccch
Q 012965 275 SPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSG 351 (452)
Q Consensus 275 ~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (452)
.++..+.+. +.......++.+++.++.+++.||..+|+................. ...... . .+ .
T Consensus 243 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~------~~----~ 310 (379)
T TIGR00881 243 LTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLL-VYWLNP-A------AN----P 310 (379)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHH-HHhcCc-c------hh----H
Confidence 876666543 5667777788999999999999986433311121111111111111 111100 0 00 0
Q ss_pred hhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 352 SLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 352 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
+.........+.......+....+..|..|++.|+++.|+.+..
T Consensus 311 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 354 (379)
T TIGR00881 311 LMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFF 354 (379)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHh
Confidence 12334444555544445566678899999999999999988764
No 67
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.93 E-value=1.1e-23 Score=198.85 Aligned_cols=322 Identities=15% Similarity=0.042 Sum_probs=200.2
Q ss_pred hhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhcccccccccccc-----CcchHH-HHHHHHHHHHH-HHhcC---ccHH
Q 012965 56 QGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-----GRKRAC-VTYCLTYILSC-ITKHS---PQYK 125 (452)
Q Consensus 56 ~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~-----Grr~~l-~~~~~~~~i~~-l~~~~---~~~~ 125 (452)
..+.+|.+.+|+|+|.+|+|...... ....+ .+++|+++||+ ||||.+ +.+.++.++.. .+++. .+.+
T Consensus 7 ~~~~~~~~~~~~g~s~~~~g~~~~~~-~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~ 84 (356)
T TIGR00901 7 VGNTLPYWLRSKNVSLKTIGFFSLVG-LPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLP 84 (356)
T ss_pred HHhHHHHHHHHcCCCHHHHHHHHHHH-HHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHH
Confidence 35677889999999999999885443 32333 77899999998 899975 56666666654 45565 4666
Q ss_pred HHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccC------CC
Q 012965 126 ILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS------LG 196 (452)
Q Consensus 126 ~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~------~~ 196 (452)
.+....++.+.+.+...++..+ ++.|. ++|++..+.. + .+..+|.++++.++..+.++.+ |+
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~a-~~~~~~~~~~r~~~~~~~----~----~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~ 155 (356)
T TIGR00901 85 LLAGLAFLIAFFSATQDIALDA-WRLEILSDEELGYGSTIY----I----VGYRAGMLLSGSLALVLASPEFANTGLITL 155 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHhCCHhhhchHHHHH----H----HHHHHHHHHHHHHHHHHhhhcccccccccc
Confidence 7777888888888888787766 77776 4455444422 2 2333444444455544443333 56
Q ss_pred cchhhHHHHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchh---HHHHHHHHHhhhchhhhhhhhhccc
Q 012965 197 PVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEK---IALLGAIQSLFEGSMYTFVFLWTPA 273 (452)
Q Consensus 197 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~ 273 (452)
||.+|.+.++..++..+......||+++++++.++..++.++..++++++++ .+.......+.....+ ....+.|.
T Consensus 156 wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 234 (356)
T TIGR00901 156 WGYIFFWTALLILPGLLVTLFLAKEPQEDASVPKPLTQAVLKPIREFFQRKNMIQALLLLLLIVLYKLGDS-AATVLTTL 234 (356)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 8999988887766655444433455332211111122233445566667664 5555444444444433 35677888
Q ss_pred cccCCCCCchH---HHHHHHH-HHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCccc
Q 012965 274 LSPNDEEIPHG---FIFATFM-LASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISF 349 (452)
Q Consensus 274 ~~~~~~~~~~~---~~~~~~~-i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (452)
|.++ .|.+.. ......+ +..+++.++++++.||+|+|+. +..+..+..+......+.....+. +.....
T Consensus 235 ~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~--l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 307 (356)
T TIGR00901 235 FLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYA--LLLFGIVQALTNAGFVWLASNGHH----DGITFP 307 (356)
T ss_pred HHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHH--HHHHHHHHHHHHHHHHHHHhcCcc----cccccc
Confidence 8776 666553 3444444 5678899999999999998773 444444444433333222111000 000000
Q ss_pred chhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhhh
Q 012965 350 SGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPL 396 (452)
Q Consensus 350 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~ 396 (452)
..+......++.+++.+..++...++.+|.+|+++|++.+|+.+...
T Consensus 308 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~ 354 (356)
T TIGR00901 308 HLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLS 354 (356)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHH
Confidence 11345556677788889999999999999999999999999876543
No 68
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.93 E-value=2.8e-23 Score=199.35 Aligned_cols=350 Identities=12% Similarity=0.040 Sum_probs=212.5
Q ss_pred HHHHHHHhhhhhhhhH-HHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCc-chHHHHHHHHHHHHH-HHhcC
Q 012965 45 VYSLMMAGDWLQGPYV-YYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGR-KRACVTYCLTYILSC-ITKHS 121 (452)
Q Consensus 45 ~~~~~~~~~~~~~p~l-~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Gr-r~~l~~~~~~~~i~~-l~~~~ 121 (452)
..+..+...+...|.+ +.+.+++|++..|+|++.+...+...++++++|+++||+|| |+++..+.++.+++. +..+.
T Consensus 10 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~ 89 (418)
T TIGR00889 10 MSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQV 89 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh
Confidence 3344445555554444 44557799999999999999999999999999999999965 778887777776665 66788
Q ss_pred ccHHHHHHHHHHHHhHhhhhhhhhhhhh---hh-------hcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 012965 122 PQYKILMIGRILGGIATSLLFSAFESWL---VA-------EHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD 191 (452)
Q Consensus 122 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~---i~-------e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~ 191 (452)
++++.+++.|++.|++.+...+...++. .. +..+|.+..+ . +|..+++.+++.+.
T Consensus 90 ~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G----------~----lG~~ig~~l~g~l~- 154 (418)
T TIGR00889 90 TTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG----------T----IGFIAAMWAVSLLD- 154 (418)
T ss_pred cCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh----------h----HHHHHHHHHHHHhc-
Confidence 9999999999999998877777665522 11 1112222111 1 34444444544432
Q ss_pred ccCCCcchhhHHHHHHHHHHHHHHHhccccccCCCCcc-hhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhh
Q 012965 192 SFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSES-KDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLW 270 (452)
Q Consensus 192 ~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (452)
....|+ +|++.+++.++..+.. ...||++++++++ ++..++.+.+.++.+|+|+++.+.....+...... ....+
T Consensus 155 -~~~~~~-~f~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~-~~~~~ 230 (418)
T TIGR00889 155 -IELSNI-QLYITAGSSALLGVFA-LTLPDIPVAKSTAKMSIKVMLGLDAFILFKNKRMAIFFFFSMLLGAPLQ-ITNIF 230 (418)
T ss_pred -ccchhH-HHHHHHHHHHHHHHHH-hcCCCCCCCccccccCHHHHhhhhHHHHhcCCCeeeHHHHHHHHHhHHH-HHHHh
Confidence 122333 4555555555444433 3566653222211 11112112234467888887766555554433322 23445
Q ss_pred ccccccCC-CC--------C-chHHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 012965 271 TPALSPND-EE--------I-PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPS 340 (452)
Q Consensus 271 ~p~~~~~~-~~--------~-~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (452)
.|.+.++. .+ . ..+...+...+..+++.+..+++.||+|+|+ .+..+..+.++...........
T Consensus 231 ~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~--~l~~~~~~~~v~~~l~~~~~~~---- 304 (418)
T TIGR00889 231 GNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKK--VMLLSLVAWALRFGFFAYGDPE---- 304 (418)
T ss_pred HHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH--HHHHHHHHHHHHHHHHHHcCcc----
Confidence 55555431 11 1 1266777777889999999999999999887 3444444444443333221110
Q ss_pred CcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhh-hh------hhHHHHHHHhcccc----
Q 012965 341 NVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFR-IP------LNIFVCVVLYNVDA---- 409 (452)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~-~~------~~~~~~~~l~~~~~---- 409 (452)
....+..++..++.+++.+...+....++.|.+|++.|++++|+.+ .. .++.+++.+.+..+
T Consensus 305 -------~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~ 377 (418)
T TIGR00889 305 -------YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGT 377 (418)
T ss_pred -------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccC
Confidence 0001244556778888888788888899999999999999998886 32 34455666666533
Q ss_pred CCchHHHHHHHHHHHHH
Q 012965 410 FPITVMFGMCSIFLLVA 426 (452)
Q Consensus 410 ~~~~~~~~~~~~~~~~~ 426 (452)
.++...+..++++.+++
T Consensus 378 ~~~~~~f~~~~~~~~i~ 394 (418)
T TIGR00889 378 FDWQTMWLFFAGYIAIL 394 (418)
T ss_pred CchHHHHHHHHHHHHHH
Confidence 34555555444444333
No 69
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.93 E-value=9.3e-23 Score=195.56 Aligned_cols=362 Identities=15% Similarity=0.050 Sum_probs=212.5
Q ss_pred HHHHhhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhcccccccccccc-----Ccch-HHHHHHHHHHHHH-HHhc
Q 012965 48 LMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-----GRKR-ACVTYCLTYILSC-ITKH 120 (452)
Q Consensus 48 ~~~~~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~-----Grr~-~l~~~~~~~~i~~-l~~~ 120 (452)
.-....++..+.+|...++.|+|.+|+|.+...... .+..+++|+++||+ |||| .+..+..+.+++. .+++
T Consensus 10 ~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~ 87 (402)
T PRK11902 10 ASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAF 87 (402)
T ss_pred HHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHh
Confidence 333445555788888999999999999988655553 47778999999999 8876 6777777777664 4455
Q ss_pred C---ccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhccc---ccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccC
Q 012965 121 S---PQYKILMIGRILGGIATSLLFSAFESWLVAEHNK---RGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS 194 (452)
Q Consensus 121 ~---~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~~~---r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~ 194 (452)
. ++++.+++..++.+...+...+...+ ++.|..+ |++..+.. ..|..+|..+++.++..+.+. .
T Consensus 88 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a-l~~~~~~~~~r~~~~~~~--------~~g~~~g~i~g~~l~~~l~~~-~ 157 (402)
T PRK11902 88 CPPHAALWPLAGLAVLVAFLSASQDIVFDA-YSTDVLHPEERGAGAAVK--------VLGYRLAMLVSGGLALWLADR-V 157 (402)
T ss_pred cCccchHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcChhhhhHHHHHH--------HHHHHHHHHHHhHHHHHHHhc-c
Confidence 4 45778888888888888888888766 7787733 44433322 234445555555555555542 2
Q ss_pred CCcchhhHHHHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhcccc
Q 012965 195 LGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPAL 274 (452)
Q Consensus 195 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 274 (452)
++||..|.+.+++.++..... ...||++.+++++++..++.+++.++++|+|+++.......+........ ..+.+.+
T Consensus 158 ~gw~~~f~i~a~~~l~~~l~~-~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~~ 235 (402)
T PRK11902 158 LGWGNTYLLMAGLMLAGALTT-LWAPEPEVPARPPRSLGEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFA-GSLSTTF 235 (402)
T ss_pred cCHHHHHHHHHHHHHHHHHHH-HhcCCCcccccccchhHHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHH-HHHHHHH
Confidence 478888988777665544433 34555433322222222234556677888888776655544443322211 2233334
Q ss_pred ccCCCCCch---HHHHHHHH-HHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccc
Q 012965 275 SPNDEEIPH---GFIFATFM-LASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFS 350 (452)
Q Consensus 275 ~~~~~~~~~---~~~~~~~~-i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (452)
..+..|.+. +......+ ++.+++..+.+++.||+++|+. +........+............+ +.
T Consensus 236 l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~--l~~~~~~~~l~~l~~~~~~~~~~-------~~--- 303 (402)
T PRK11902 236 LIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRS--LMLFGVLQAVSNLGYWVLAVTPK-------HL--- 303 (402)
T ss_pred HHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHH--HHHHHHHHHHHHHHHHHHHhcCC-------cH---
Confidence 444456555 34443333 4578899999999999998772 33333333322222211111100 00
Q ss_pred hhhHHHHH----HHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhh---hhhHHHHHHHhccccCCchHHHHHHHHHH
Q 012965 351 GSLQLLGF----CTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI---PLNIFVCVVLYNVDAFPITVMFGMCSIFL 423 (452)
Q Consensus 351 ~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 423 (452)
+...... +..+++.+...+....++++.+|.+.++...++.+. ..+ .+++.+.+.. ++...+...+++.
T Consensus 304 -~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~G~l~~~~--G~~~~f~~~~~~~ 379 (402)
T PRK11902 304 -WTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYALLSALASVGRVYVG-PTSGYLVEAY--GWPGFYLMTVVIA 379 (402)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHh--ChHHHHHHHHHHH
Confidence 2223332 345556666677788888888888776643333222 233 3566677763 4555555555555
Q ss_pred HHHHHHHHhhhhhhCC
Q 012965 424 LVASVLQRRLMVIADK 439 (452)
Q Consensus 424 ~~~~~~~~~~~~~~~~ 439 (452)
++.....++.+++.++
T Consensus 380 ~~~~~~~~~~~~~~~~ 395 (402)
T PRK11902 380 LPGLALLWLMRGTIGR 395 (402)
T ss_pred HHHHHHHHHHhhhccc
Confidence 5555555554444443
No 70
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.93 E-value=3.6e-23 Score=196.98 Aligned_cols=329 Identities=13% Similarity=0.086 Sum_probs=211.4
Q ss_pred HHHHHHhhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcc----hHHHHHHHHHHHHH-HHhc
Q 012965 46 YSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRK----RACVTYCLTYILSC-ITKH 120 (452)
Q Consensus 46 ~~~~~~~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr----~~l~~~~~~~~i~~-l~~~ 120 (452)
.+....+.++..|++|...+|+|.|..++|.+.+...+...+.+++.|+++||+||| +.+.....+ ... ....
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~--~~~~~~~~ 90 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLL--FAVAFWFG 90 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHH--HHHHHHHh
Confidence 344445667778999999999999999999999999988889999999999999994 333222211 122 2345
Q ss_pred CccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcch
Q 012965 121 SPQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVA 199 (452)
Q Consensus 121 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~-~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~ 199 (452)
++++|.+++.|++.|++.+...|...+ +..++ ++|++..+..+.. ..+|..++|.+++.+.++ ++||.
T Consensus 91 ~~~~~~l~i~~~l~g~~~~~~~~~~~a-~~~~~~~~~~~a~~~~~~~--------~~lg~~igp~lgg~l~~~--~g~~~ 159 (382)
T PRK11128 91 AHSFWLLFVAIGLFNLFFSPLVPLTDA-LANTWQKQIGLDYGKVRLW--------GSIAFVIGSALTGKLVSW--FGEQA 159 (382)
T ss_pred cccHHHHHHHHHHHHHHHcccccHHHH-HHHHHHhhccCCcchHHHH--------HHHHHHHHHHHHHHHHHH--cChhH
Confidence 789999999999999998888887655 55555 4455544433322 235666666777766654 46677
Q ss_pred hhHHHHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCC
Q 012965 200 PFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDE 279 (452)
Q Consensus 200 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 279 (452)
.|+..++..++..+... ..||+++++++++ ..++..++.++++|+|+++.......+....... ...+.|.|.++ .
T Consensus 160 ~f~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~-~ 235 (382)
T PRK11128 160 ILWILTAGVASMLLGQL-LRPTIMPQGESRQ-QESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAA-YYGFSAIYWQA-A 235 (382)
T ss_pred HHHHHHHHHHHHHHHHH-ccCCCCCcccccc-ccccccchHHHHHcChhHHHHHHHHHHHHHHhHh-HHHHHHHHHHH-C
Confidence 78766654444333322 3444332221111 1111133566788999888776655555444322 34556666654 4
Q ss_pred CCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHH
Q 012965 280 EIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLL 356 (452)
Q Consensus 280 ~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (452)
|.+. +...+...++.++...+.+++.||+++|+. +..+....++........... +..++
T Consensus 236 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~--l~~~~~~~~~~~~~~~~~~~~---------------~~~~~ 298 (382)
T PRK11128 236 GYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDL--LLLSAICGVVRWGLMGSTTAL---------------PWLIV 298 (382)
T ss_pred CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH--HHHHHHHHHHHHHHHHhhhhH---------------HHHHH
Confidence 4443 666666677888889999999999988872 444444444433332222211 35566
Q ss_pred HHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh-------hhHHHHHHHhcccc
Q 012965 357 GFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP-------LNIFVCVVLYNVDA 409 (452)
Q Consensus 357 ~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~-------~~~~~~~~l~~~~~ 409 (452)
..++.+++.+...+....+..+. +++++++..+..+.. .+..+++.+.+..+
T Consensus 299 ~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g 357 (382)
T PRK11128 299 IQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLG 357 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 78888888888888888888887 555567777766522 34566677777644
No 71
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.93 E-value=9e-23 Score=195.06 Aligned_cols=329 Identities=9% Similarity=0.058 Sum_probs=212.7
Q ss_pred HhhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HH---hcCccHHH
Q 012965 51 AGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT---KHSPQYKI 126 (452)
Q Consensus 51 ~~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~---~~~~~~~~ 126 (452)
+.+++..|.+|.+.+++|.|+.+.|++.+..+....+++++.|++.||+|||+++..+..+++++. +. +..++++.
T Consensus 17 ~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~ 96 (410)
T TIGR00885 17 FANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTL 96 (410)
T ss_pred HHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHH
Confidence 455666899999999999999999999999999888999999999999999999999999998875 43 23578999
Q ss_pred HHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc------------
Q 012965 127 LMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD------------ 191 (452)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~------------ 191 (452)
+++.|++.|+|.+...+...+ ++.+. ++|+++.+.. +....+|..+|+.+++.+.....+
T Consensus 97 ~l~~~~l~G~g~g~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~ 171 (410)
T TIGR00885 97 FLVGLFILTAGLGFLETAANP-YILVMGPESTATRRLNLA----QSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSP 171 (410)
T ss_pred HHHHHHHHHhhHHHHHhhhhH-HHHHHCCHhHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCH
Confidence 999999999999999888766 65554 3444444433 334444555555555444221100
Q ss_pred --------ccCCCcchhhHHHHHHHHHHHHHHH-hccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhch
Q 012965 192 --------SFSLGPVAPFDAAACFLAIGMVIIL-SSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGS 262 (452)
Q Consensus 192 --------~~~~~~~~~f~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (452)
....+||.+|.+.+++.++..++.. ...||.++++++ + ++.+++.++.+|+|+++......++....
T Consensus 172 ~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~l~~f~yvg~ 247 (410)
T TIGR00885 172 EELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNHSDAK-Q---ISFSASLSRLARIRHYREGVIAQFFYVGV 247 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc-c---ccchhhHHHHHhChhHHHHHHHHHHHHHH
Confidence 0113588889877766655443332 234442221111 1 11122334667888877765555554444
Q ss_pred hhhhhhhhccccccCC-CCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcC
Q 012965 263 MYTFVFLWTPALSPND-EEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVA 338 (452)
Q Consensus 263 ~~~~~~~~~p~~~~~~-~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (452)
... ...+.+.|.++. .+.+. +...+.......+|+++++++.||+++|+ .+........+.+++......
T Consensus 248 e~~-~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~--~l~i~~~~~~~~~ll~~~~~~--- 321 (410)
T TIGR00885 248 QIM-CWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHK--VLMAYAIIGMALCLGSIFAGG--- 321 (410)
T ss_pred HHH-HHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH--HHHHHHHHHHHHHHHHHHcCC---
Confidence 333 466777777542 23332 23344455678899999999999998776 344444444443333322111
Q ss_pred CCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhh----hhhHHHHHHHhcc
Q 012965 339 PSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI----PLNIFVCVVLYNV 407 (452)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~----~~~~~~~~~l~~~ 407 (452)
........+.+++.+..+|..++...+..+++.+....++... ...+.+.+.+.|.
T Consensus 322 -------------~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~~Gga~~p~l~G~~~d~ 381 (410)
T TIGR00885 322 -------------HVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAIIGGGIVPPLQGFIIDM 381 (410)
T ss_pred -------------hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHhccchHHHHHHHHHHH
Confidence 1346677788889999999999999999998875434333222 2333444555553
No 72
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.92 E-value=6e-22 Score=193.79 Aligned_cols=353 Identities=14% Similarity=0.083 Sum_probs=207.5
Q ss_pred HHHhhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhcccccccccccc-----CcchH-HHHHHHHHHHHH-HHhcC
Q 012965 49 MMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-----GRKRA-CVTYCLTYILSC-ITKHS 121 (452)
Q Consensus 49 ~~~~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~-----Grr~~-l~~~~~~~~i~~-l~~~~ 121 (452)
......+..+.+|...++.|.|.+++|........ .+..+++|+++||+ ||||. +..+.+..+++. .+++.
T Consensus 24 ~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~ 101 (491)
T PRK11010 24 SGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQA--YVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFL 101 (491)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 33455555888888899999999999976333322 25667899999999 99986 556666666664 44553
Q ss_pred ---ccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCC
Q 012965 122 ---PQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSL 195 (452)
Q Consensus 122 ---~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~ 195 (452)
++++.+.+.+++.|++.+...+...+ +..|+ ++|++..+ ....|..+|.++++.++..+.+. .+
T Consensus 102 ~~~~~l~~l~~~~~l~~~~~a~~~i~~~a-~~~~~~~~~~rg~~~~--------i~~~g~~lG~llg~~l~~~l~~~-~~ 171 (491)
T PRK11010 102 EPGTQLRWLAALAVVIAFCSASQDIVFDA-WKTDVLPAEERGAGAA--------ISVLGYRLAMLVSGGLALWLADR-YL 171 (491)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcChhhhHHHHH--------HHHHHHHHHHHHHHHHHHHHHhc-cc
Confidence 57888999999999999988888766 77877 33333333 22234455666666666665541 25
Q ss_pred CcchhhHHHHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccc
Q 012965 196 GPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALS 275 (452)
Q Consensus 196 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 275 (452)
+||..|++.+++.++..+... ..||++++++++++..++..++.++.+++++.+.......+...... ....+.+.|+
T Consensus 172 GWr~~f~i~a~l~ll~~l~~~-~~~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~-~~~~~~~~~l 249 (491)
T PRK11010 172 GWQGMYWLMAALLIPCIIATL-LAPEPTDTIPVPKTLEQAVVAPLRDFFGRNNAWLILLLIVLYKLGDA-FAMSLTTTFL 249 (491)
T ss_pred CHHHHHHHHHHHHHHHHHHHH-hcCCCccccccccchhhhHHHHHHHHHcCcCHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 788999888777666544443 35554322111111111222345566666666655444433333322 2355666676
Q ss_pred cCCCCCch---HHHHH-HHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccch
Q 012965 276 PNDEEIPH---GFIFA-TFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSG 351 (452)
Q Consensus 276 ~~~~~~~~---~~~~~-~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (452)
.+..|.+. +.... ...++.+++.++.|+++||+|+|+. +.....+..+........... .++ .
T Consensus 250 ~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~--l~i~~~l~~l~~l~~~~l~~~-~~~----------~ 316 (491)
T PRK11010 250 IRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRA--LMIFGILQGVSNAGYWLLSIT-DKN----------L 316 (491)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH--HHHHHHHHHHHHHHHHHHHhc-ccc----------H
Confidence 55556655 34443 3346889999999999999998762 333333323222221111111 000 0
Q ss_pred hhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhhhhH------HHHHHHhccccCCchHHHHHHHHHHHH
Q 012965 352 SLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNI------FVCVVLYNVDAFPITVMFGMCSIFLLV 425 (452)
Q Consensus 352 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~~~~~ 425 (452)
+......++..+..+...+..+++..+..|++.+++.+|+.+...+. .+++.+.+..+ +...+...+++.+.
T Consensus 317 ~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G--~~~~f~~~~~~~l~ 394 (491)
T PRK11010 317 YSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHG--WPTFYLFSVAAAVP 394 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--hHHHHHHHHHHHHH
Confidence 12233444444445555566788888999998888888777653221 23455555533 44445544444444
Q ss_pred HHHHH
Q 012965 426 ASVLQ 430 (452)
Q Consensus 426 ~~~~~ 430 (452)
+.+..
T Consensus 395 ~l~~~ 399 (491)
T PRK11010 395 GLLLL 399 (491)
T ss_pred HHHHH
Confidence 44333
No 73
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.92 E-value=5.5e-23 Score=198.41 Aligned_cols=352 Identities=14% Similarity=0.073 Sum_probs=193.4
Q ss_pred HHHHHHHHHHHhhhhhhhhHHHHHh-hcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH--H
Q 012965 41 NYLLVYSLMMAGDWLQGPYVYYLYS-TYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC--I 117 (452)
Q Consensus 41 ~~~~~~~~~~~~~~~~~p~l~~i~~-~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~--l 117 (452)
......++...+.+...|+++...+ ++|+|+.++|.+.+...+...+.+++.|+++||+||||++..+..+.++.. .
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~ 93 (420)
T PRK09528 14 IFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPF 93 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 3334444444445555777766654 599999999999999999999999999999999999999988766655432 1
Q ss_pred Hh--cCc-----cHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 012965 118 TK--HSP-----QYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLL 189 (452)
Q Consensus 118 ~~--~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~-~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l 189 (452)
.. .++ ......++++..|.+.....+.... +..+. +++++..+..+. . ..+|..+++.+++.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~g~~~~----~----~~~g~~i~~~~~g~l 164 (420)
T PRK09528 94 FIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEA-YIERVSRRSGFEYGRARM----W----GSLGWALCAFIAGIL 164 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhh-HHHHHHhhccccchhhHH----h----hhHHHHHHHHHHHHH
Confidence 11 111 1111223333334333333333322 22222 223333232222 2 234555555666655
Q ss_pred hcccCCCcchhhHHHHHHHHHHHHHHHhccccccCCC---Ccc-hhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhh
Q 012965 190 VDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDP---SES-KDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYT 265 (452)
Q Consensus 190 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (452)
.+ .+|+.+|+..+++.++.........+|+++++ +++ ++..+...++..+.+|+|+++............ +.
T Consensus 165 ~~---~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~-~~ 240 (420)
T PRK09528 165 FN---INPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANALGANASAVSLKDALALLKLPKFWFLVLYVIGVACF-YD 240 (420)
T ss_pred Hh---cCchHhHHHHHHHHHHHHHHHhcccccccchhhhccchhcccccccHHHHHHHccCCCeEeehHHHHHHHHH-HH
Confidence 43 35667787777666555544443333332221 100 001111122344567788766554433322222 22
Q ss_pred hhhhhccccccCC---CCCc---hHHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCC
Q 012965 266 FVFLWTPALSPND---EEIP---HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAP 339 (452)
Q Consensus 266 ~~~~~~p~~~~~~---~~~~---~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (452)
....+.|.+..+. .+.+ .+...+...+...++.++.|++.||+|+|+. +..+..+.++......+....
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~--~~~~~~l~~~~~~l~~~~~~~--- 315 (420)
T PRK09528 241 VFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNA--LLLAGTIMAVRIIGSGFATGP--- 315 (420)
T ss_pred HHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchh--hHHHHHHHHHHHHHHHhcccH---
Confidence 2233455544321 1222 2566777778888999999999999999883 444444444433333222111
Q ss_pred CCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhh-hhh------hhhHHHHHHHhccccCCc
Q 012965 340 SNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNF-FRI------PLNIFVCVVLYNVDAFPI 412 (452)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~-~~~------~~~~~~~~~l~~~~~~~~ 412 (452)
+..+....+.+.+.+...+....+..|.+|++.+++..+. .++ ..+..+.+++.+..+ +
T Consensus 316 ------------~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G--~ 381 (420)
T PRK09528 316 ------------LEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIG--F 381 (420)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhC--c
Confidence 2445556666777776667777888999999999887654 232 134455566666543 4
Q ss_pred hHHHHHHHHHHH
Q 012965 413 TVMFGMCSIFLL 424 (452)
Q Consensus 413 ~~~~~~~~~~~~ 424 (452)
...+..++++.+
T Consensus 382 ~~~f~~~~~~~~ 393 (420)
T PRK09528 382 QGTYLILGGIVL 393 (420)
T ss_pred hHHHHHHHHHHH
Confidence 444444444333
No 74
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.91 E-value=2.3e-22 Score=189.28 Aligned_cols=322 Identities=24% Similarity=0.303 Sum_probs=222.6
Q ss_pred HHHHhhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHH
Q 012965 48 LMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKI 126 (452)
Q Consensus 48 ~~~~~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~ 126 (452)
..........+..|...+++|.++.+.+.+.+...+...+.+++.|+++||+|||+.+..+..+..++. ...+.++++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (352)
T cd06174 10 LSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWL 89 (352)
T ss_pred HHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHH
Confidence 333445555788888889999999999999999988888999999999999999999999999998876 6677899999
Q ss_pred HHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHH
Q 012965 127 LMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDA 203 (452)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~ 203 (452)
+++.|++.|++.+...+...+ ++.|. ++|++..+.. . .+..+|..+++.+++.+.+..+ |+..+.+
T Consensus 90 ~~~~~~l~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~----~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~ 158 (352)
T cd06174 90 LLVGRFLLGLGGGALYPAAAA-LIAEWFPPKERGRALGLF----S----AGFGLGALLGPLLGGLLAESLG--WRWLFLI 158 (352)
T ss_pred HHHHHHHHHcccccccHhHHH-HHHHhCCccchhhhhhHH----H----HHHHHHHHHHHHHHHHHHHHhh--HHHHHHH
Confidence 999999999999998888866 77777 3444444422 2 2334555555566666555443 5677777
Q ss_pred HHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch
Q 012965 204 AACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH 283 (452)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 283 (452)
.+...++...... ..+ |+.+............... ...+.|.+.++..+.+.
T Consensus 159 ~~~~~~~~~~~~~-~~~--------------------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 210 (352)
T cd06174 159 LAILGLLLALLLL-FLL--------------------------RLLLLLALAFFLLSFGYYG-LLTYLPLYLQEVLGLSA 210 (352)
T ss_pred HHHHHHHHHHHHH-HHH--------------------------HHHHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCCH
Confidence 6666655544433 222 3344444444444444333 46677777766544433
Q ss_pred ---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHH
Q 012965 284 ---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCT 360 (452)
Q Consensus 284 ---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (452)
+.......++..++.++.+++.||++||+. .+..+.....+........... +...+...+
T Consensus 211 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~---------------~~~~~~~~~ 274 (352)
T cd06174 211 AEAGLLLSLFGLGGILGALLGGLLSDRLGRRRL-LLLIGLLLAALGLLLLALAPSL---------------ALLLVALLL 274 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH-HHHHHHHHHHHHHHHHHHhccH---------------HHHHHHHHH
Confidence 667777889999999999999999988761 2444444444444443332221 356778888
Q ss_pred HHHHhhchhhHHHHHHhhcCCcccccchhhhhhhhh------hHHHHHHHhccccCCchHHHHHHHHHHHHH
Q 012965 361 FEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPL------NIFVCVVLYNVDAFPITVMFGMCSIFLLVA 426 (452)
Q Consensus 361 ~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 426 (452)
.+++.+...+...++..|..|+++|++.+|+.+... +..+.+.+.+. .++...+...++..++.
T Consensus 275 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~--~~~~~~~~~~~~~~~i~ 344 (352)
T cd06174 275 LGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDT--GGYGGVFLILAALALLA 344 (352)
T ss_pred HHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cCcchHHHHHHHHHHHH
Confidence 999999999999999999999999999999887742 22344444443 34444444444444433
No 75
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.91 E-value=7.3e-22 Score=189.10 Aligned_cols=355 Identities=14% Similarity=0.068 Sum_probs=207.7
Q ss_pred hHHHHHHHHHHHHhhhhhhhhHHHHH-hhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-
Q 012965 39 KNNYLLVYSLMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC- 116 (452)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~p~l~~i~-~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~- 116 (452)
-|......++...+.+...|++|... +++|.|+.+.|.+.+...+...+.+++.|+++||+|||+.++.+....+++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~ 83 (396)
T TIGR00882 4 FWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFA 83 (396)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 34444555666666667778887665 5689999999999999999999999999999999999999998777665532
Q ss_pred H---HhcCc-----cHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 012965 117 I---TKHSP-----QYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGN 187 (452)
Q Consensus 117 l---~~~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~-~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~ 187 (452)
. ..+.+ .+..+.+.|++.|++.+...+.... +..|. ++++...+..+. . ..+|..+++.+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~----~----~~~g~~~g~~~~g 154 (396)
T TIGR00882 84 PFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEA-YIEKVSRNSNFEYGKARM----F----GCVGWALCASIAG 154 (396)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHH-HHHHhhhhcccccchhhh----h----cccHHHHHHHHHh
Confidence 1 12222 2334567788899888888777755 55554 222222222211 2 2345555556655
Q ss_pred hhhcccCCCcchhhHHHHHHHHHHHHHHHhccccccCCCCcch----hHHHHHHHhhHHhhcchhHHHHHHHHHhhhchh
Q 012965 188 LLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESK----DLLTQFRGAAVAIASDEKIALLGAIQSLFEGSM 263 (452)
Q Consensus 188 ~l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (452)
.+.+ ++|+.+|.+.+.+.++..++.....||+++++++++ +..++..++.++.+|||+++............
T Consensus 155 ~l~~---~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~- 230 (396)
T TIGR00882 155 ILFS---IDPQIVFWLGSGFALILMLLLMFAKPKAPSSATVANALGANASAFSLKLALELFRQRKFWMFVLYVVGVACV- 230 (396)
T ss_pred hhhc---cCchHHHHHHHHHHHHHHHHHHHhCCCCchhhhhhcccccccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHH-
Confidence 5443 477888988777666655444433333221111000 00011123456778888877665444333322
Q ss_pred hhhhhhhccccccCCC---CCc---hHHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhc
Q 012965 264 YTFVFLWTPALSPNDE---EIP---HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLV 337 (452)
Q Consensus 264 ~~~~~~~~p~~~~~~~---~~~---~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (452)
+.....+.|.|.++.. +.+ .+...+...+...++....+++.||+|+|+. +..+..+.++...........
T Consensus 231 ~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~--l~~~~~l~~l~~~~~~~~~~~- 307 (396)
T TIGR00882 231 YDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNA--LLIAGTIMSVRIIGSSFATTA- 307 (396)
T ss_pred HHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh--HHHHHHHHHHHHHHHHhcCCh-
Confidence 2223334555543322 221 2566677777888888999999999998883 444444444433332211111
Q ss_pred CCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhh-hhhh------hhHHHHHHHhccccC
Q 012965 338 APSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNF-FRIP------LNIFVCVVLYNVDAF 410 (452)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~-~~~~------~~~~~~~~l~~~~~~ 410 (452)
+......++.+++..........+..+..|++.+++..+. .+.. .+..+++++.+..
T Consensus 308 --------------~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~-- 371 (396)
T TIGR00882 308 --------------LEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI-- 371 (396)
T ss_pred --------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc--
Confidence 2345556666666655545555677788888888876655 2321 3335556666653
Q ss_pred CchHHHHHHHHHHHH
Q 012965 411 PITVMFGMCSIFLLV 425 (452)
Q Consensus 411 ~~~~~~~~~~~~~~~ 425 (452)
++...+...+++..+
T Consensus 372 G~~~~f~~~~~~~~i 386 (396)
T TIGR00882 372 GFQGAYLVLGCIVLL 386 (396)
T ss_pred ccHHHHHHHHHHHHH
Confidence 444444444444433
No 76
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.91 E-value=9e-22 Score=191.22 Aligned_cols=313 Identities=13% Similarity=0.109 Sum_probs=193.3
Q ss_pred HHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccc----cCcch-HHHHHHHHHHHHH-HHhcCcc------HHHHH
Q 012965 61 YYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK----QGRKR-ACVTYCLTYILSC-ITKHSPQ------YKILM 128 (452)
Q Consensus 61 ~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr----~Grr~-~l~~~~~~~~i~~-l~~~~~~------~~~l~ 128 (452)
+.+.+++|+++.++|.+.+...+...+..|+.|+++|| +|||| .++.+....+++. ++...++ ...++
T Consensus 24 ~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 103 (437)
T TIGR00792 24 FFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAY 103 (437)
T ss_pred HHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHH
Confidence 34446899999999999999999999999999999997 67755 5666777777664 4444443 45667
Q ss_pred HHHHHHHhHhhhhhhhhhhhhhhhc----ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc-ccCCCcchhhHH
Q 012965 129 IGRILGGIATSLLFSAFESWLVAEH----NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD-SFSLGPVAPFDA 203 (452)
Q Consensus 129 ~~r~l~G~~~~~~~~~~~~~~i~e~----~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~-~~~~~~~~~f~~ 203 (452)
+.+++.+++.+...+...+ +..|. ++|++..+. ......+|..++..+.+.+...+.+ ...++|+..+.+
T Consensus 104 ~~~~~~~~~~~~~~~~~~a-l~~~~~~~~~~R~~~~~~----~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i 178 (437)
T TIGR00792 104 ITYILLGLFYSFVNIPYWS-LVPAITLDPRERESLSTF----RRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALV 178 (437)
T ss_pred HHHHHHHHHHHhhcccHhh-CcccccCCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHH
Confidence 7888888888876555444 44443 344444332 2233334444443333333222211 124578888888
Q ss_pred HHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCc-
Q 012965 204 AACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP- 282 (452)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~- 282 (452)
.+++.++..+......||+++++++.++.+.+.++..++++++|+++.......+.....+. ...+.+.+.++..+.+
T Consensus 179 ~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 257 (437)
T TIGR00792 179 LALIGVVSLIICFFGTKERYSEIPKNIEKKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNI-KNGVQVYYFTYVLGDPE 257 (437)
T ss_pred HHHHHHHHHHHHHcCCEecCCCCCcccccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH-HcchhheeEeeecCChH
Confidence 77777766665555566654221111111123455667788888887766655555444333 3444555555444422
Q ss_pred -hHHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHH
Q 012965 283 -HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTF 361 (452)
Q Consensus 283 -~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (452)
.+.......++.+++.++.+++.||+|+|+. ...+..+..+........... .+...+..++.
T Consensus 258 ~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~--~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~ 321 (437)
T TIGR00792 258 LFSYMGSIAIVAGLIGVLLFPRLVKKFGRKIL--FAGGILLMVLGYLIFFFAGSN--------------LPLILVLIILA 321 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH--HHHHHHHHHHHHHHHHHcchh--------------HHHHHHHHHHH
Confidence 2445556678899999999999999998773 444444444333332221111 02445566777
Q ss_pred HHHhhchhhHHHHHHhhcCC-------cccccchhhhhhhh
Q 012965 362 EACVGIFWPSIMKMRSQYIP-------EEARSTIMNFFRIP 395 (452)
Q Consensus 362 g~~~~~~~~~~~~~~~~~~p-------~~~r~~~~g~~~~~ 395 (452)
+++.+...+..+++.+|..| ++.+|+..|+.++.
T Consensus 322 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 362 (437)
T TIGR00792 322 GFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFV 362 (437)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHH
Confidence 88888888889999998875 44567777877763
No 77
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.90 E-value=5e-21 Score=186.37 Aligned_cols=335 Identities=13% Similarity=0.113 Sum_probs=191.6
Q ss_pred hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccc-cCcchHHHHHHHHHHHHH-HHhcCccHHH-HHHHHHH
Q 012965 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCLTYILSC-ITKHSPQYKI-LMIGRIL 133 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr-~Grr~~l~~~~~~~~i~~-l~~~~~~~~~-l~~~r~l 133 (452)
.....++.+++|.+.++.+++.........+..+++|+++|| +||||++..+.++++++. +++++++... ++++|.+
T Consensus 35 ~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l 114 (489)
T PRK10207 35 GILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGT 114 (489)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 344445568899999999888777776677777889999999 999999999999999986 6677766444 5589999
Q ss_pred HHhHhhhhhhhhhhhhhhhc-cccc-chhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHH
Q 012965 134 GGIATSLLFSAFESWLVAEH-NKRG-FEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIG 211 (452)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~e~-~~r~-~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~ 211 (452)
+|+|.|...|...+ ++.|. +++. ++.+..+ .+..+.+ +|..++|.+++++.++. +||+.|.+.++..++.
T Consensus 115 ~~ig~g~~~~~~~~-li~~~~p~~~~~~~~~~~-~~~~~~n----ig~~~g~~l~g~l~~~~--gw~~~F~i~~i~~~~~ 186 (489)
T PRK10207 115 IAVGNGLFKANPAS-LLSKCYPPKDPRLDGAFT-LFYMSIN----IGSLISLSLAPVIADKF--GYSVTYNLCGAGLIIA 186 (489)
T ss_pred HHhccccccCCHHH-HHHHhcCCCchhhhcchh-HHHHHHH----HHHHHHHHHHHHHHHhh--ChHHHHHHHHHHHHHH
Confidence 99999999888866 77775 2221 2222111 2333444 45555555555555544 5667787754433322
Q ss_pred HHHHH--hccccccC-CCCc-chhHHH-------------------H---H-----------------H--HhhHHhhcc
Q 012965 212 MVIIL--SSWTENYG-DPSE-SKDLLT-------------------Q---F-----------------R--GAAVAIASD 246 (452)
Q Consensus 212 ~~~~~--~~~~~~~~-~~~~-~~~~~~-------------------~---~-----------------~--~~~~~~~~~ 246 (452)
..... ++..++.+ ++++ +.+... + . . ...++..|+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~~~~~~r~ 266 (489)
T PRK10207 187 LLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFKLDKTGRN 266 (489)
T ss_pred HHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 22221 11111111 1111 000000 0 0 0 000112232
Q ss_pred hhHHHHHHH-HHhhhchhhhhhhhhccccccCC-------CCCchHHHHHHHHHHHHHHhHHHHHHhccCCCCch-----
Q 012965 247 EKIALLGAI-QSLFEGSMYTFVFLWTPALSPND-------EEIPHGFIFATFMLASMLGSSLASRLMARSPPRVE----- 313 (452)
Q Consensus 247 ~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~-------~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~----- 313 (452)
|.+....+. ........+....+..+.+.++. ...+++.....+.+..++..++.+++.||.++|+.
T Consensus 267 r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~ 346 (489)
T PRK10207 267 KMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMP 346 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcH
Confidence 322222111 12222222333334444444321 12233555566667777888888999999987751
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhh
Q 012965 314 SYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFR 393 (452)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~ 393 (452)
..+..+..+.++++............. +. ....+..+...++.+++.+...|...+.+.+..|++.++.++|+.+
T Consensus 347 ~k~~~G~~l~~~~~~~~~~~~~~~~~~---~~--~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~ 421 (489)
T PRK10207 347 MKFTLGMFLCSLGFLTAAAAGMWFADA---QG--LTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWF 421 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCC---CC--ccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHH
Confidence 114445555454443322111100000 00 1122456678889999999999999999999999999999999987
Q ss_pred hh--hhHHHHHHH
Q 012965 394 IP--LNIFVCVVL 404 (452)
Q Consensus 394 ~~--~~~~~~~~l 404 (452)
+. .+..+++.+
T Consensus 422 l~~~ig~~lg~~l 434 (489)
T PRK10207 422 LTQAAAFLLGGYV 434 (489)
T ss_pred HHHHHHHHHHHHH
Confidence 64 333444433
No 78
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.90 E-value=9.4e-24 Score=191.99 Aligned_cols=334 Identities=15% Similarity=0.129 Sum_probs=204.4
Q ss_pred hHHHHHHHHHHHHhhhhh----hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHH
Q 012965 39 KNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL 114 (452)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~----~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i 114 (452)
.++.+.+.++..+.+.++ ....+.+.+.+|++++..|.+.+...+..++++|+.|+++|||+||+++..|..++.+
T Consensus 31 ~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~ 110 (493)
T KOG1330|consen 31 PTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTL 110 (493)
T ss_pred chHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHH
Confidence 445566666777766666 3355677789999999999888888888889999999999999999999999999999
Q ss_pred HH-HHhcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 012965 115 SC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLV 190 (452)
Q Consensus 115 ~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~ 190 (452)
+. +++++..+|++.++|.+.|+|.+...|.+.+ +++|. ++|++..++ +......|.++|.+. +..+.
T Consensus 111 Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s-~IaD~f~~~~Rs~~~~i----fy~~ipvGsglG~vv----gs~va 181 (493)
T KOG1330|consen 111 AVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPS-LIADSFPDDKRSRVLGI----FYFAIPVGSGLGYVV----GSVVA 181 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhhhcccchh-HhhhcCcchhhhHHHHH----hhhhcccccceeEEe----eeeec
Confidence 86 7799999999999999999999999999977 99987 455554442 444455555555544 44444
Q ss_pred cccCCCcchhhHHHHHHHHHHHHHHHhccccccCC-CCcchh------HHHHHHHhhHHhhcchhHHHHHHHHHhhhchh
Q 012965 191 DSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGD-PSESKD------LLTQFRGAAVAIASDEKIALLGAIQSLFEGSM 263 (452)
Q Consensus 191 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (452)
++.+| ||+.|...+++.++..++.....+|.++. .++.+. ......++.+...+++.+....+.....+...
T Consensus 182 ~~~~~-Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~ 260 (493)
T KOG1330|consen 182 SLTFW-WRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVI 260 (493)
T ss_pred cCccc-eEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCcCCCCccchHHHHHHHHccCceeeehHHHHHHHHhc
Confidence 44555 88999999988888877776555554321 111111 11222344445555444433333333222222
Q ss_pred hhhhhhhcccccc-----CCCCCchH-HHHHHHHHHHHHHhHHHHHHhccCCCC--chhHHHHH--HHHHHHHHHHHH--
Q 012965 264 YTFVFLWTPALSP-----NDEEIPHG-FIFATFMLASMLGSSLASRLMARSPPR--VESYMQIV--FVVSSVSLLLPI-- 331 (452)
Q Consensus 264 ~~~~~~~~p~~~~-----~~~~~~~~-~~~~~~~i~~~~~~~~~g~l~dr~g~~--~~~~~~~~--~~~~~~~~~~~~-- 331 (452)
-. ...|.|.+.. .+.+.+.+ ....+...++.+|.+.+|.++||+.|+ +....... ....++...++.
T Consensus 261 Gs-~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~ 339 (493)
T KOG1330|consen 261 GS-LSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLF 339 (493)
T ss_pred cc-cchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHH
Confidence 21 2445555442 12222334 444566677888888899888884221 10011111 111111111111
Q ss_pred HHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhc-hhhHHHHHHhhcCCcccccchhhhhhh
Q 012965 332 VTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGI-FWPSIMKMRSQYIPEEARSTIMNFFRI 394 (452)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (452)
........ + ....+.+++.|..... .+....-+..|.+|+++|.+++++...
T Consensus 340 ~~~~~~~~------s-----~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~ 392 (493)
T KOG1330|consen 340 LFPAFTSS------S-----MIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTV 392 (493)
T ss_pred HHHhhhhH------H-----HHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHH
Confidence 11111000 0 1222223333333222 235556678899999999999887665
No 79
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.90 E-value=5.4e-21 Score=207.50 Aligned_cols=311 Identities=15% Similarity=0.048 Sum_probs=196.0
Q ss_pred hhhHHHHHhhcCCCcch--hHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH----HHhcCccHHHHHHH
Q 012965 57 GPYVYYLYSTYGFGKGE--IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC----ITKHSPQYKILMIG 130 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~--~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~----l~~~~~~~~~l~~~ 130 (452)
..+.+.+.++++.+.+. .+++.++..+...++++++|+++||+|||++++.+.++..+.. ++...++++.+++.
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 109 (1146)
T PRK08633 30 ILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAV 109 (1146)
T ss_pred HHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 44445566667665433 5677777777777889999999999999999999887665532 23456789999999
Q ss_pred HHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc--------cCCCcch
Q 012965 131 RILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS--------FSLGPVA 199 (452)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~--------~~~~~~~ 199 (452)
|+++|++.+...++..+ ++.|. ++|++..+..+. +. .+|.++++.+++.+.+. .+| |.+
T Consensus 110 r~l~G~~~~~~~~~~~~-~i~~~~~~~~r~~~~~~~~~----~~----~ig~~lg~~l~~~l~~~~~~~~~~~~~~-~~~ 179 (1146)
T PRK08633 110 TFLLGAQSAIYSPAKYG-IIPELVGKENLSRANGLLEA----FT----IVAILAGTALFSFLFESVNGNTPSEILG-RIA 179 (1146)
T ss_pred HHHHHHHHHhhchHHHh-hhHHhcCcccchhhhhHHHH----HH----HHHHHHHHHHHHHHHHhhcccccccccc-chH
Confidence 99999999999888866 77776 456665554333 22 34444444444444432 112 222
Q ss_pred hhHHHHHHHHHHHHHHHhccccccCCCCc-----chhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhcccc
Q 012965 200 PFDAAACFLAIGMVIILSSWTENYGDPSE-----SKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPAL 274 (452)
Q Consensus 200 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 274 (452)
.+....+...+..++.....|+.+.+.++ .....++..+..+.+++++.++...+...+.....+. ...+.|.+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 258 (1146)
T PRK08633 180 PAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKKYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQL-AQANFPAY 258 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhcCcCCCCCCcccccccccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH-HHHhhHHH
Confidence 22222222222222222244554322111 1112223344566677877777665554444443333 46677777
Q ss_pred ccCCCCCch----HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccc
Q 012965 275 SPNDEEIPH----GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFS 350 (452)
Q Consensus 275 ~~~~~~~~~----~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (452)
..+..+.+. +.+.+...++.+++.++.+++.||+++++. +.++..+.+++..........
T Consensus 259 ~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~-------------- 322 (1146)
T PRK08633 259 AKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGL--VPLGALGLALSLFLLPTAPSL-------------- 322 (1146)
T ss_pred HHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccc--hhHHHHHHHHHHHHHHHhhhH--------------
Confidence 765555432 566677778899999999999999987762 434444443333333222221
Q ss_pred hhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 351 GSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 351 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
+..++..++++++.+...+...+++.+..|++.||+++|+.++.
T Consensus 323 -~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~ 366 (1146)
T PRK08633 323 -ASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFL 366 (1146)
T ss_pred -HHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHH
Confidence 35566778888888888888999999999999999999887764
No 80
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.90 E-value=3.2e-21 Score=208.55 Aligned_cols=308 Identities=15% Similarity=0.065 Sum_probs=191.9
Q ss_pred hhHHHHHHHHhhhhhccccccccccccCcchHHHHHHH---HHHHHH-HHhcCccHHHHHHHHHHHHhHhhhhhhhhhhh
Q 012965 73 EIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCL---TYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESW 148 (452)
Q Consensus 73 ~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~---~~~i~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 148 (452)
..++..+...+...++++++|+++||+|||+++..... ...+.. .+...++++.++++|+++|++.+...|+..+
T Consensus 53 ~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a- 131 (1140)
T PRK06814 53 LVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS- 131 (1140)
T ss_pred HHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH-
Confidence 35666667777778999999999999999998644222 222222 3334589999999999999999999998877
Q ss_pred hhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHhccccccCC
Q 012965 149 LVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGD 225 (452)
Q Consensus 149 ~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 225 (452)
++.+. +++++..+..+. +..+|.++++.+++++.+.. +|+..|....+..++. ++.....|+.+.+
T Consensus 132 ~l~~~~~~~~~~~a~~~~~~--------~~~ig~~igp~l~g~l~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 200 (1140)
T PRK06814 132 ILPDHLNKDELLGANALVEA--------GTFIAILLGTIIGGLATISG--NFVILVALLMGIAVLG-WLASLFIPKTGNA 200 (1140)
T ss_pred hhHhhcCccccchhhHHHHH--------HHHHHHHHHHHHHHHHHhcc--ccHHHHHHHHHHHHHH-HHHHhhCCCCCCC
Confidence 77776 445554443322 34455566666666666544 4556663333333333 3333345544322
Q ss_pred CCcc---hhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---HHHHHHHHHHHHHHhH
Q 012965 226 PSES---KDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSS 299 (452)
Q Consensus 226 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~ 299 (452)
+++. .+..++.....+.+.+++.++...+...+....... ...+.|.|.++.++.+. +.+.+...++.+++.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~ 279 (1140)
T PRK06814 201 APDLKIDRNIIRSTITLLKYAKADKRIWLAILGISWFWLVGAV-VLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSF 279 (1140)
T ss_pred CCCCeeccchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH-HHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHH
Confidence 2111 112233445667788888888876666655555443 46789999887666654 6777888899999999
Q ss_pred HHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhh-cCCCCcC--C--CCcccchhhHHHHHHHHHHHhhchhhHHHH
Q 012965 300 LASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFL-VAPSNVK--S--GGISFSGSLQLLGFCTFEACVGIFWPSIMK 374 (452)
Q Consensus 300 ~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 374 (452)
+.+++.||..+++. +..+.++.++..+.+.+.... ..+.... - -......+...+..+++|++.+...+...+
T Consensus 280 ~~g~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 357 (1140)
T PRK06814 280 LASKLSEGRITLLY--VPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFA 357 (1140)
T ss_pred HHHHHhCCceeeee--ehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHH
Confidence 99999988765552 333333333332222221000 0000000 0 000011245566777888888888888999
Q ss_pred HHhhcCCcccccchhhhhhhh
Q 012965 375 MRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 375 ~~~~~~p~~~r~~~~g~~~~~ 395 (452)
++++..|++.||+++|+.++.
T Consensus 358 ~~~~~~p~~~~G~v~g~~~~~ 378 (1140)
T PRK06814 358 ALQAWANPAHRARVIAANNVL 378 (1140)
T ss_pred HHHhhCCcccceeeeHHHHHH
Confidence 999999999999999988764
No 81
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.89 E-value=5.6e-20 Score=165.10 Aligned_cols=303 Identities=18% Similarity=0.204 Sum_probs=216.1
Q ss_pred HhhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HH---hcCccHHH
Q 012965 51 AGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT---KHSPQYKI 126 (452)
Q Consensus 51 ~~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~---~~~~~~~~ 126 (452)
+.+....+.+|.+.+.++++..|.+.+....+....+.+++.|++.+|+|+|+.++.++.++++++ +. +...++..
T Consensus 27 ~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~ 106 (422)
T COG0738 27 FITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGF 106 (422)
T ss_pred HHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHH
Confidence 345555889999999999999999999888888888899999999999999999999999999986 43 35778999
Q ss_pred HHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc-----------
Q 012965 127 LMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS----------- 192 (452)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~----------- 192 (452)
++.+-++.|.|.+....++.+ +++.. ++..++....+..+ ++|..++|.+++.+..+
T Consensus 107 FL~~lFila~Gi~~LetaaNp-~v~~lg~~~~a~~rlnl~q~fn--------~lGa~~gp~~g~~lils~~~~~~~~~~~ 177 (422)
T COG0738 107 FLVALFILASGIGLLETAANP-YVTLLGKPESAAFRLNLAQAFN--------GLGAILGPLLGSSLILSGVALTMSAAQI 177 (422)
T ss_pred HHHHHHHHHhhhHHHHhccch-HHHHhCCchhHHHHHHHHHHhh--------hhHHHHHHHHHHHHHHhhhhhccCHHHH
Confidence 999999999999999999878 76554 33455555555543 35555555555555431
Q ss_pred cC------CCcchhhHHHHHHHHHHHHHHH-hccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhh
Q 012965 193 FS------LGPVAPFDAAACFLAIGMVIIL-SSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYT 265 (452)
Q Consensus 193 ~~------~~~~~~f~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (452)
.. -.++.+|...+...++..+... .+.|+.+..+++..+.. .....+++|+|+.+...+..++..+.-..
T Consensus 178 ~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~~---~~~~~~l~~~~~~~~gvl~~FlYVG~Eva 254 (422)
T COG0738 178 LAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGASG---SAGLSSLFQNKHLRLGVLAIFLYVGAEVA 254 (422)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccccccccc---cchHHHHHhChHHHHHHHHHHHHHhHHHH
Confidence 00 1256777776655554444333 34455443322222111 11345678888888888777777666555
Q ss_pred hhhhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 012965 266 FVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNV 342 (452)
Q Consensus 266 ~~~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (452)
...|.+.|+.+..+.+. +...+....+.++|++++.++.+|+...+ .+.....+..+.+....+....
T Consensus 255 -~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k--~Laf~a~~~ill~~~~~l~~g~------ 325 (422)
T COG0738 255 -IGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEK--YLAFYALIAILLLLAVALIGGV------ 325 (422)
T ss_pred -HHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH--HHHHHHHHHHHHHHHHHHhcCh------
Confidence 58889998887656544 45667778899999999999999995444 4555444444444444433332
Q ss_pred CCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCccc
Q 012965 343 KSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA 384 (452)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~ 384 (452)
..+.+..+.|+..+..+|..++...+..|++.
T Consensus 326 ----------v~~~~l~~ig~F~simfPTIfslal~~l~~~t 357 (422)
T COG0738 326 ----------VALYALFLIGLFNSIMFPTIFSLALKNLGEHT 357 (422)
T ss_pred ----------HHHHHHHHHHHHhHHHHHHHHHHHHhccCccc
Confidence 56777888999999999999999999999443
No 82
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.89 E-value=5.6e-21 Score=180.17 Aligned_cols=322 Identities=17% Similarity=0.200 Sum_probs=189.1
Q ss_pred hhcC--CCcchhH----HHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-H---HhcCccHHHHHHHHHHH
Q 012965 65 STYG--FGKGEIG----QLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-I---TKHSPQYKILMIGRILG 134 (452)
Q Consensus 65 ~~~g--~s~~~~g----~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l---~~~~~~~~~l~~~r~l~ 134 (452)
+.+| .+.++.. .+.+...+++++++...|.++||+|||..+..+.++..++. + +...+++..++++|++.
T Consensus 47 ~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~ 126 (485)
T KOG0569|consen 47 ERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIV 126 (485)
T ss_pred HhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 4456 4444444 44455667777888889999999999999999988887753 2 24578999999999999
Q ss_pred HhHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhcccCCCcchhhHHHHHHHHHHHH
Q 012965 135 GIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNL-LVDSFSLGPVAPFDAAACFLAIGMV 213 (452)
Q Consensus 135 G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~-l~~~~~~~~~~~f~~~~~~~~~~~~ 213 (452)
|+..|...... +.++.|..+.+.++. .+.....+.. +|..++..++.. +.. ..-.|.+.+....+..++...
T Consensus 127 Gl~~gl~~~~~-pmyl~E~sP~~~RG~-~g~~~~~~~~----~g~ll~~~~~l~~ilG-t~~~W~~l~~~~~i~~~~~l~ 199 (485)
T KOG0569|consen 127 GLACGLSTGLV-PMYLTEISPKNLRGA-LGTLLQIGVV----IGILLGQVLGLPSLLG-TEDLWPYLLAFPLIPALLQLA 199 (485)
T ss_pred HHHhHHHHHHH-HHHHhhcChhhhccH-HHHHHHHHHH----HHHHHHHHHccHHhcC-CCcchHHHHHHHHHHHHHHHH
Confidence 99999987776 668999854444432 1222333333 333333333221 111 112456666666666665554
Q ss_pred HHHhccccccC-------CCCcchhHHHH-----------------H---------HHhhHHhhcchhHHH----HHHHH
Q 012965 214 IILSSWTENYG-------DPSESKDLLTQ-----------------F---------RGAAVAIASDEKIAL----LGAIQ 256 (452)
Q Consensus 214 ~~~~~~~~~~~-------~~~~~~~~~~~-----------------~---------~~~~~~~~~~~~~~~----~~~~~ 256 (452)
..+ +.||+++ +++++++..+. . +.+.++++++++... .....
T Consensus 200 ~l~-~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~ 278 (485)
T KOG0569|consen 200 LLP-FLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVS 278 (485)
T ss_pred HHh-cCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHH
Confidence 444 7788543 22222111100 0 002345666644333 22233
Q ss_pred Hhhhchhhhhhhhhcccccc-CCCCCch-HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHh
Q 012965 257 SLFEGSMYTFVFLWTPALSP-NDEEIPH-GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTS 334 (452)
Q Consensus 257 ~~~~~~~~~~~~~~~p~~~~-~~~~~~~-~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (452)
...+.........|...+++ .+...+. .......++...+.++++.++.||.|||+. ++.+..++.+..++.....
T Consensus 279 ~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpL--ll~~~~~~~~~~~~~~~~~ 356 (485)
T KOG0569|consen 279 FAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPL--LLISLSLMAVALLLMSIAL 356 (485)
T ss_pred HHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHH--HHHHHHHHHHHHHHHHHHH
Confidence 33333333334455555444 3333333 345556678899999999999999999983 5555444444443333222
Q ss_pred hhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchh-hHHHHHHhhcCCcccccchhhhhhhh---hhHHHHH
Q 012965 335 FLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFW-PSIMKMRSQYIPEEARSTIMNFFRIP---LNIFVCV 402 (452)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~p~~~r~~~~g~~~~~---~~~~~~~ 402 (452)
...+. .. .+..+..+.+.+++.+.++... |+.+-+.+|++|++.|+++.+..... .+..++.
T Consensus 357 ~l~~~----~~--~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~ 422 (485)
T KOG0569|consen 357 FLSNS----FG--SWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGF 422 (485)
T ss_pred HHHHH----hh--hHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHH
Confidence 22110 00 1112344566666777776664 99999999999999999998775543 4444443
No 83
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.88 E-value=2.3e-19 Score=174.77 Aligned_cols=339 Identities=13% Similarity=0.125 Sum_probs=197.5
Q ss_pred HhhhhhhhhHHHHHh-h--cCCCcchhHHHHHHHHhhhhhccccccccccc-cCcchHHHHHHHHHHHHH-HHhcCccHH
Q 012965 51 AGDWLQGPYVYYLYS-T--YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCLTYILSC-ITKHSPQYK 125 (452)
Q Consensus 51 ~~~~~~~p~l~~i~~-~--~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr-~Grr~~l~~~~~~~~i~~-l~~~~~~~~ 125 (452)
++.....+.+|...+ + +|++..+.|.+.+.......++.+++|+++|| +|||+++..+.++.+++. +.+++++++
T Consensus 24 ~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~ 103 (475)
T TIGR00924 24 FSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPD 103 (475)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHh
Confidence 344444666665554 4 89999999999888888888999999999999 899999999999999986 668888889
Q ss_pred HHHHHHHHHHhHhhhhhhhhhhhhhhhcccc---cchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhH
Q 012965 126 ILMIGRILGGIATSLLFSAFESWLVAEHNKR---GFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFD 202 (452)
Q Consensus 126 ~l~~~r~l~G~~~~~~~~~~~~~~i~e~~~r---~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~ 202 (452)
.++++|.+.|++.|...+...+ +++|..++ +++....+ ..... ..+|..+++.+++.+.++. +|+..|.
T Consensus 104 ~~~~~~~l~g~g~g~~~~~~~~-~~a~~~~~~~~~~r~~~~~-~~~~~----~niG~~ig~~l~g~l~~~~--g~~~~f~ 175 (475)
T TIGR00924 104 LIFYGLGTIAVGSGLFKANPSS-MVGKLYERGDMPRRDGGFT-LFYMS----INIGSFISPLLAGVIAENY--GYHVGFN 175 (475)
T ss_pred HHHHHHHHHHhccccccCCHHH-HHHHhcCCCCcccccceeh-hHHHH----HHHHHHHHHHHHHHHHHhc--ChHHHHH
Confidence 9999999999999988887755 76665211 12222111 22223 3355555556666655433 5677787
Q ss_pred HHHHHHHHHHHHHHhc---cccccCCCCc--ch--hHHHHH---------------------------------------
Q 012965 203 AAACFLAIGMVIILSS---WTENYGDPSE--SK--DLLTQF--------------------------------------- 236 (452)
Q Consensus 203 ~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~--~~~~~~--------------------------------------- 236 (452)
+.++..++..+..... .++.++++++ .+ +..++.
T Consensus 176 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (475)
T TIGR00924 176 LAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFF 255 (475)
T ss_pred HHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 7665444333222211 1111111110 00 000000
Q ss_pred ---HH-hhHHhhcch--hHHHHHHHHHhhhchhhhhhhhhccccccCC-------CCCchHHHHHHHHHHHHHHhHHHHH
Q 012965 237 ---RG-AAVAIASDE--KIALLGAIQSLFEGSMYTFVFLWTPALSPND-------EEIPHGFIFATFMLASMLGSSLASR 303 (452)
Q Consensus 237 ---~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-------~~~~~~~~~~~~~i~~~~~~~~~g~ 303 (452)
.+ ..+...|++ .+..+ +.........|....+..+.+.++. .+.+.+...+.+.+..++.+++..+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~l~l-~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~ 334 (475)
T TIGR00924 256 RLAFKPRLDAVARNKMYAYIVL-FLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAM 334 (475)
T ss_pred HHHHhccCCHHHHhHHHHHHHH-HHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHH
Confidence 00 000011111 11111 2222222233443344445444332 2234577888888777777766554
Q ss_pred ----Hhcc-CCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhh
Q 012965 304 ----LMAR-SPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQ 378 (452)
Q Consensus 304 ----l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 378 (452)
+.|| .+.+....+..+..+.++++..........+ .......+..+...++.+++.....|..+++..|
T Consensus 335 ~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~------~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~ 408 (475)
T TIGR00924 335 IWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFAD------AGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTK 408 (475)
T ss_pred HHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcC------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 4444 2222211135556666555555433221111 0011223567888999999999999999999999
Q ss_pred cCCcccccchhhhhhhh--hhHHHHHHH
Q 012965 379 YIPEEARSTIMNFFRIP--LNIFVCVVL 404 (452)
Q Consensus 379 ~~p~~~r~~~~g~~~~~--~~~~~~~~l 404 (452)
..|++.||+.+|+.... .+..+++.+
T Consensus 409 ~aP~~~~g~~~g~~~l~~~~g~~l~~~~ 436 (475)
T TIGR00924 409 IAPQRLMGQMLGMWFLAQAMGSLLGGYL 436 (475)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998764 333444443
No 84
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.87 E-value=3.3e-20 Score=182.93 Aligned_cols=327 Identities=17% Similarity=0.154 Sum_probs=199.0
Q ss_pred hhhhhHHHHHhhc-----CCCc--chhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHH
Q 012965 55 LQGPYVYYLYSTY-----GFGK--GEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKI 126 (452)
Q Consensus 55 ~~~p~l~~i~~~~-----g~s~--~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~ 126 (452)
...+....+.++. ..+. .+.+++.+...+++.+++++.|+++|++|||++++.+.+.+.++. ++++++|++.
T Consensus 65 ~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~ 144 (513)
T KOG0254|consen 65 GISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQ 144 (513)
T ss_pred cchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 4466665555432 2222 244788888888888999999999999999999999999999987 7799999999
Q ss_pred HHHHHHHHHhHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHH
Q 012965 127 LMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAAC 206 (452)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~ 206 (452)
++++|++.|+|.|...... +.+++|..++..|..... ..+....+|..+|. ..+.. .++..++||.++.+..+
T Consensus 145 l~~GR~l~G~g~G~~~~~~-piy~sEiap~~~RG~l~~-~~~l~~~~Gi~~~~----~~~~~-~~~~~~~Wr~~~~~~~i 217 (513)
T KOG0254|consen 145 LIVGRILTGLGVGGASVLA-PVYISEIAPAHIRGTLVS-LYQLFITIGILLGY----CINYG-TSKVYAGWRIPLGLALI 217 (513)
T ss_pred HHHHHHHhccchhhhhhcc-hhhHhhcCChhhhHHHHH-HHHHHHHHHHHHHH----HHhhh-hccCCccHHHHHHHHHH
Confidence 9999999999999998776 658999844433333221 23333333333332 22222 21112678988887777
Q ss_pred HHHHHHHHHHhccccccC------CCCcchhHHHHHHH----------------------------hhHHhhc--c-hhH
Q 012965 207 FLAIGMVIILSSWTENYG------DPSESKDLLTQFRG----------------------------AAVAIAS--D-EKI 249 (452)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~----------------------------~~~~~~~--~-~~~ 249 (452)
..++..+. ....||+++ +.+++++..++.+. ..+++.+ . ++.
T Consensus 218 ~~~~~~~~-~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 296 (513)
T KOG0254|consen 218 PAVILALG-MLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRL 296 (513)
T ss_pred HHHHHHHH-HHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHH
Confidence 66666555 446666432 22111111111100 0111111 1 122
Q ss_pred HHHHHHHHhhhchhhhhhhhhccccccCCCCCch-HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHH
Q 012965 250 ALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH-GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLL 328 (452)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 328 (452)
........+.+...+....+|.+.+++.....+. .......++...++..+...+.||+|||+ .++.+.....++..
T Consensus 297 ~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr~--lll~s~~~m~~~~~ 374 (513)
T KOG0254|consen 297 IIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGVVNFLGTLVATYLVDRFGRRK--LLLFGAAGMSICLV 374 (513)
T ss_pred HHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccHH--HHHHhHHHHHHHHH
Confidence 2234444555556666667777777664332222 44445556778888888899999999998 35555555555555
Q ss_pred HHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchh-hHHHHHHhhcCCcccccchhhhhhh
Q 012965 329 LPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFW-PSIMKMRSQYIPEEARSTIMNFFRI 394 (452)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (452)
+........... ........+..+...+++-..++..+ |..+.+.+|.+|.+.|+++.++...
T Consensus 375 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~ 438 (513)
T KOG0254|consen 375 ILAVVGVFALYY---PNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVA 438 (513)
T ss_pred HHHHHHHHhccC---CCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHH
Confidence 544433321110 00112222444555555555555545 7788899999999999999887554
No 85
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.87 E-value=1.9e-19 Score=169.91 Aligned_cols=348 Identities=18% Similarity=0.178 Sum_probs=217.6
Q ss_pred hHHHHHHHHHHHHhhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccC-cchHHHHHHHHHHHHH-
Q 012965 39 KNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQG-RKRACVTYCLTYILSC- 116 (452)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~G-rr~~l~~~~~~~~i~~- 116 (452)
+.++....++-.+..+...|+++...++.|.|..|+|.+.+...+...+..+++|.++||++ +||.+.+..++.++..
T Consensus 4 ~~rLs~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~ 83 (400)
T PF03825_consen 4 KFRLSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALL 83 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHH
Confidence 44555555666666677789998888999999999999999999988888899999999986 5777777666666654
Q ss_pred HHhcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc-ccccchhhHHHHHHHHHHHHHHHHHHHH-HHhhhhhhhcccC
Q 012965 117 ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAIL-SGLFGNLLVDSFS 194 (452)
Q Consensus 117 l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~-~~r~~~~~~~~~~~~~~~~~g~~ig~~~-~~~l~~~l~~~~~ 194 (452)
.....++++.++...++..+......|..++ +.-+. ++++...+..+..-+.+.. ++... +..+.+. .+
T Consensus 84 ~~~~~~~f~~~~~~~~l~~~~~~p~~pl~ds-i~~~~~~~~~~~YG~iRlwGSiGf~----~~~~~~~~~~~~~----~~ 154 (400)
T PF03825_consen 84 LLAFSSSFWWLFVIMLLFSFFFSPTMPLSDS-IALSYLGDRGKDYGRIRLWGSIGFI----VAALAFGGLLGGY----LG 154 (400)
T ss_pred HHHHhccHHHHHHHHHHHHHHHccHHHHHHH-HHHHHcccccCCCCcchhhhhHHHH----HHHHHHHHHHHhh----hc
Confidence 4567888998888888888887777777766 53333 4455555555554343332 22211 1112221 22
Q ss_pred CCc-chhhHHHHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccc
Q 012965 195 LGP-VAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPA 273 (452)
Q Consensus 195 ~~~-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 273 (452)
++. ...+++.+...++...... ..|+.+.+++++++.+++..++..+++|+|+++.+.+...+.+... .....+.+.
T Consensus 155 ~~~~~~~~~i~~~~~~ll~~~~l-~lp~~~~~~~~~~~~~~~~~~~~~~llk~~~~~~Fll~~~l~~~~~-~~~~~f~~~ 232 (400)
T PF03825_consen 155 ISGTSLIFYIAAILSLLLAGFAL-FLPKTPPKRSAKESVKKLLGLDALKLLKNPRFLVFLLAAFLIGISH-AAYYTFFSI 232 (400)
T ss_pred cccccHHHHHHHHHHHHHHHHHH-hCCCCccccccCCCcccccchHHHHHhcCccHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 221 2334444443333222222 3455442222222212222223346888998887766655554443 334667777
Q ss_pred cccCCCCCc---hHHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccc
Q 012965 274 LSPNDEEIP---HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFS 350 (452)
Q Consensus 274 ~~~~~~~~~---~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (452)
|+++..+.+ .+..++...+.+++.-...+++.+|+|.++ .+.++.....+=..+......+ ++..
T Consensus 233 yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~--ll~~a~~~~~vR~~l~a~~~~~----------~~~~ 300 (400)
T PF03825_consen 233 YLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKW--LLLLALVAYAVRWLLYAYFSDP----------WPFI 300 (400)
T ss_pred HHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH--HHHHHHHHHHHHHHHHHHhcCC----------cHHH
Confidence 777654332 255666777889999999999999998776 3555554444444443332111 0100
Q ss_pred hhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh-------hhHHHHHHHhcccc
Q 012965 351 GSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP-------LNIFVCVVLYNVDA 409 (452)
Q Consensus 351 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~-------~~~~~~~~l~~~~~ 409 (452)
.........+.|..++..+.....++.+..|++.|+++.++++.. .+..++|++.+..+
T Consensus 301 ~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g 366 (400)
T PF03825_consen 301 VALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFG 366 (400)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhc
Confidence 112233345689999999999999999999999999999887753 23356677776544
No 86
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.87 E-value=1.4e-20 Score=179.92 Aligned_cols=303 Identities=12% Similarity=0.078 Sum_probs=201.4
Q ss_pred HHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHH-HHHhcCccHHHHHHHHHHHHhHhhh
Q 012965 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILS-CITKHSPQYKILMIGRILGGIATSL 140 (452)
Q Consensus 62 ~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~-~l~~~~~~~~~l~~~r~l~G~~~~~ 140 (452)
.+.+|.+....+.+.+.++.+++..++.++.|.+.||++-.+.+....+.+++- .+....+|++.+++.|++.|+.++.
T Consensus 71 g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~ 150 (495)
T KOG2533|consen 71 GLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESG 150 (495)
T ss_pred CCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcc
Confidence 445888888888887777777766688889999999999888888888888774 4666799999999999999999999
Q ss_pred hhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc----ccCCCcchhhHHHHHHHHHHHH
Q 012965 141 LFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD----SFSLGPVAPFDAAACFLAIGMV 213 (452)
Q Consensus 141 ~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~----~~~~~~~~~f~~~~~~~~~~~~ 213 (452)
.+|.... +++.+ ++|+.+.+.... ...+|+ +++++++..+.+ ..-.+||+.|++.+++.++..+
T Consensus 151 ~wP~~~~-~lg~wy~~~e~g~r~~~~~a----~~~~g~----i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi 221 (495)
T KOG2533|consen 151 GWPGVVA-ILGNWYGKSERGLRMGIWYA----SASLGN----IFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGI 221 (495)
T ss_pred cchHHHH-HHHhhcChhhhhhhHHHHHH----hcchhh----HHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHh
Confidence 9999966 88877 556666664333 333344 444444443221 1234778889999988888877
Q ss_pred HHHhccccccCCC---Ccchh--HHH-------------HHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccc
Q 012965 214 IILSSWTENYGDP---SESKD--LLT-------------QFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALS 275 (452)
Q Consensus 214 ~~~~~~~~~~~~~---~~~~~--~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 275 (452)
+.++.+|+++.+. ++.++ ..+ ......++.+++|+.|..++...+.....+. ..+|+|.++
T Consensus 222 ~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~-~~~~lpl~l 300 (495)
T KOG2533|consen 222 VVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYG-FSYWLPLYL 300 (495)
T ss_pred eEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhcccc-HHHHHHHHH
Confidence 7776777655421 11110 001 1123456788999999999999888888776 599999999
Q ss_pred cCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCC---CCchhHHHHHHHHHHHHH-HHHHHHhhhcCCCCcCCCCcc
Q 012965 276 PNDEEIPH---GFIFATFMLASMLGSSLASRLMARSP---PRVESYMQIVFVVSSVSL-LLPIVTSFLVAPSNVKSGGIS 348 (452)
Q Consensus 276 ~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 348 (452)
++..+.+. ..+.....++++++.+++|.++||.. .++. .......+..... .........
T Consensus 301 ~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~-~~~~~~~~~~~~g~~~l~~~~~~------------ 367 (495)
T KOG2533|consen 301 KSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRL-LFIVFLCLYAIIGAISLLAAAVL------------ 367 (495)
T ss_pred HcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHH-HHHHHHHHHHHHHHHHHHhhccc------------
Confidence 88544543 56667778999999999999999952 2221 1112222222111 221111111
Q ss_pred cchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhh
Q 012965 349 FSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMN 390 (452)
Q Consensus 349 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g 390 (452)
............+.....+......++....+.|.....
T Consensus 368 ---~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~ 406 (495)
T KOG2533|consen 368 ---PGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTV 406 (495)
T ss_pred ---hHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHH
Confidence 122333333444455566777888888887766554443
No 87
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.87 E-value=4.4e-19 Score=169.57 Aligned_cols=346 Identities=13% Similarity=-0.001 Sum_probs=194.6
Q ss_pred hhhhhhHHHHHhhcCCCcchhHHH--HHHHHhhhhhccccc-cccccccCcchHHHHHHHHH-HH-HHHHh---cCcc-H
Q 012965 54 WLQGPYVYYLYSTYGFGKGEIGQL--FIAGFGSSMLFGTIV-GSLADKQGRKRACVTYCLTY-IL-SCITK---HSPQ-Y 124 (452)
Q Consensus 54 ~~~~p~l~~i~~~~g~s~~~~g~~--~~~~~~~~~l~~~~~-G~l~Dr~Grr~~l~~~~~~~-~i-~~l~~---~~~~-~ 124 (452)
++..|++|...+|.|.|.+++|.. ....+....+.+|+. ++..||+||||..++.+.+. +. ....+ ...+ .
T Consensus 18 ~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 97 (390)
T TIGR02718 18 GLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGA 97 (390)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhH
Confidence 444899999999999999999986 355677777888888 55899999999976665332 22 11122 2222 3
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHH
Q 012965 125 KILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAA 204 (452)
Q Consensus 125 ~~l~~~r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~ 204 (452)
..++..-++.++..+...+..+. +..|.. |++..+..+. ....|..+|..+++...+.+.++ ++||.+|++.
T Consensus 98 ~~~~~~~~~~~~~~a~~d~~~d~-~~~~~~-~~~~~~~~~~----~~~~g~~lG~~~g~~~~~~l~~~--~gw~~~f~~~ 169 (390)
T TIGR02718 98 GWAVGLLACASLASATQDIATDG-MAAEHF-NGRTLAKGNA----VQIAGVMIGFFGGGAGTLVLFGK--FGQRPAFLLV 169 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHhC-CHhhhhHHHH----HHHHHHHHHHHHHHHHHHHHHHH--hCHHHHHHHH
Confidence 33444445555666666666655 444442 2232232222 33344556666666666666643 4677889888
Q ss_pred HHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch-
Q 012965 205 ACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH- 283 (452)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~- 283 (452)
+++.++.........|++++++++++ +..++.++.+|+|+.+.......+....... ...+.+.|.+| .+.+.
T Consensus 170 a~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~l~~-~G~s~~ 243 (390)
T TIGR02718 170 ACVPLASLVCVLWLKDRAVASPEAPL----ARRASLFRFFRRPLAWSLLALALLSAMTAVS-GFGLSKLYLVD-AGWPLE 243 (390)
T ss_pred HHHHHHHHHHHHHcCCCCcCccccch----hhHHHHHHHHcCcCHHHHHHHHHHHHHHHHH-HHHHhhHHHHh-cCCCHH
Confidence 87766555544433333222111111 1123455677888776655554444443333 35566777765 46655
Q ss_pred --HHHHHHHH-HHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHH
Q 012965 284 --GFIFATFM-LASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCT 360 (452)
Q Consensus 284 --~~~~~~~~-i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (452)
+....... ...+++..+.|++.||+|+|+. +..+..+................ ............+
T Consensus 244 ~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~--l~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~ 312 (390)
T TIGR02718 244 WIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRT--FILGVGLAGSLALLWFAQAAFWL---------APGIAVAWSCSAF 312 (390)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHH--HHHHHHHHHHHHHHHHHHHHccc---------CCcHHHHHHHHHH
Confidence 44444444 3566778899999999998873 33333333222222111111100 0001122333344
Q ss_pred HHHHhhchhhHHHHHHhhcCCc-ccccchhhhhhhh------hhHHHHHHHhccccCCchHHHHHHHHHHHHH
Q 012965 361 FEACVGIFWPSIMKMRSQYIPE-EARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGMCSIFLLVA 426 (452)
Q Consensus 361 ~g~~~~~~~~~~~~~~~~~~p~-~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 426 (452)
.++..+...+...+...+..++ +.+++.++..+.. .+..+++.+.+.. ++...+..++++.+++
T Consensus 313 ~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~--G~~~~f~~~~~~~l~a 383 (390)
T TIGR02718 313 GSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRF--GYAGGFLSGTVLAVLA 383 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--ccHHHHHHHHHHHHHH
Confidence 4556677777777777777766 7789888776653 3445566666653 3444444444444443
No 88
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.87 E-value=2.6e-19 Score=166.55 Aligned_cols=330 Identities=13% Similarity=0.097 Sum_probs=199.6
Q ss_pred cchhhHHHHHHHHHHHHhhhhh--hhhHHHHHhhcCCCcch-hHHHHHHHHhhhhhccccccccccccCcchHHHHHHHH
Q 012965 35 FNSFKNNYLLVYSLMMAGDWLQ--GPYVYYLYSTYGFGKGE-IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLT 111 (452)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~--~p~l~~i~~~~g~s~~~-~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~ 111 (452)
.+.+++..+.+|....+.+.=. .-..|.+.+|+|+|.+| .|.+++..+....+..++.|+++||+|.|+++..+.+.
T Consensus 22 ~~~W~~~~~~lC~fGF~~e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~ 101 (511)
T TIGR00806 22 LKSWRVLVLYLCFYGFMAQFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALS 101 (511)
T ss_pred hcchhHHHHHHHHHHHHHHhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH
Confidence 3455555555555544432211 33346777899999999 88887777777778888999999999999999999999
Q ss_pred HHHHH-HHhcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 012965 112 YILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGN 187 (452)
Q Consensus 112 ~~i~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~ 187 (452)
+++.. +.+++++++.+.+.|++.|++.|... +... ++..+ ++|++..+. . ..|..+|.++++++++
T Consensus 102 Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~~s-yI~~WfP~kER~ratsi----~----~sg~~vG~~Ia~~L~q 171 (511)
T TIGR00806 102 FVCVWLLLLLGTSVWHMQLMEVFYSVTMAARI-AYSS-YIFSLVPPSRYQRAAAY----S----RAAVLLGVFLSSVLGQ 171 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-HHHHHCCHHHHHHHHHH----H----HHHHHHHHHHHHHHHH
Confidence 99976 77899999999999999999999998 6545 77777 444444332 2 3344455566666666
Q ss_pred hhhcccCCCcchhh---HHHHHHHHHHHHHHHhccccccC------C---------------CCc---ch--------hH
Q 012965 188 LLVDSFSLGPVAPF---DAAACFLAIGMVIILSSWTENYG------D---------------PSE---SK--------DL 232 (452)
Q Consensus 188 ~l~~~~~~~~~~~f---~~~~~~~~~~~~~~~~~~~~~~~------~---------------~~~---~~--------~~ 232 (452)
.+. +++||... ++......+++++.+ .+|..++ + +++ .. ..
T Consensus 172 ll~---s~gWr~y~~Ln~Isl~s~~~a~~~a~-~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (511)
T TIGR00806 172 LLV---TLGWISYSTLNIISLVFMTFSVFLAL-FLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSF 247 (511)
T ss_pred HHH---hcCchhHHHHHHHHHHHHHHHHHHHH-hCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHH
Confidence 522 23454433 233322223222222 3331110 0 000 00 00
Q ss_pred HHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCC----CCchHHHHHHHHHHHHHHhHHHHHHhccC
Q 012965 233 LTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDE----EIPHGFIFATFMLASMLGSSLASRLMARS 308 (452)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~----~~~~~~~~~~~~i~~~~~~~~~g~l~dr~ 308 (452)
.+......+...+|++.+...+-..+...+ |..+.+|.-.+-++.. +. -|.+-++..+.+.+..+..|++-.++
T Consensus 248 ~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g-~~qv~~Y~Q~LW~~v~~~~~~y-NG~veA~~tllga~~a~~ag~~~~~w 325 (511)
T TIGR00806 248 LVRMLSELVTIYRNPQLLLWSLWWVFNSAG-YYLITYYVHTLWGTLDESLNKY-NGAVDAASTLLGAITSFIAGFVNIRW 325 (511)
T ss_pred HHHHHHHHHHHhcCcchhhhhHHHHHHhhH-HHHHHHHHHHHHHHcCCCcccc-CCHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 112233444556666665555444443333 3333444333222111 12 25666666677788888899886665
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccch
Q 012965 309 PPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTI 388 (452)
Q Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~ 388 (452)
.+.....+.+...+.+..+++.....+ .|...++.++++..+....++....+++....+.-|..
T Consensus 326 ~~~~~l~l~v~s~~~~gll~~m~~t~~---------------Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLv 390 (511)
T TIGR00806 326 ARWSKLLIAVVSAIQAGLVFWMSQSHD---------------IWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALV 390 (511)
T ss_pred hhhHHHHHHHHHHHHHHHhhhhhcccc---------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEE
Confidence 332221222222222222222222112 26889999999999999999999999999888888999
Q ss_pred hhhhhhh
Q 012965 389 MNFFRIP 395 (452)
Q Consensus 389 ~g~~~~~ 395 (452)
.|++++.
T Consensus 391 FGiNtfv 397 (511)
T TIGR00806 391 FGINTFV 397 (511)
T ss_pred EecHHHH
Confidence 9986653
No 89
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.86 E-value=7.6e-19 Score=155.49 Aligned_cols=320 Identities=15% Similarity=0.129 Sum_probs=222.8
Q ss_pred hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHh
Q 012965 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGI 136 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~l~~~~~~~~~l~~~r~l~G~ 136 (452)
+|.++++.+|+|+|.++.|.+.+...+.-.+++|+..+++.|+|.++.+..++++.+++.+.-...+.+.++.+-.+.|.
T Consensus 32 gPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~~~~~L~~gt~l~G~ 111 (395)
T COG2807 32 GPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLGGLPLLFLGTLLAGA 111 (395)
T ss_pred hhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 89999999999999999999999998888899999999999999999999999999999876433488889999999999
Q ss_pred HhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHH
Q 012965 137 ATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIIL 216 (452)
Q Consensus 137 ~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~ 216 (452)
+.+........ .+.++-+ ++.+.....++....++..+++.+.+++... . .+||.....-+...++.++.-
T Consensus 112 gIav~nVLLPs-lIK~~Fp--k~~~~mtglYs~sl~~~aaLaa~lavpla~~----~-~gW~~aL~~WAl~allAl~~W- 182 (395)
T COG2807 112 GIAVINVLLPS-LIKRDFP--KRVGLMTGLYSTSLGAGAALAAALAVPLAQH----S-GGWRGALGFWALLALLALLIW- 182 (395)
T ss_pred hHHHHHHhhhH-HHHhhcc--cchhhHHhHHHHHHHHHHHHHhhhhhHHHHh----h-ccHHHHHHHHHHHHHHHHHHH-
Confidence 99998877744 6666522 2333344467777777777777777777654 2 356666666565555544432
Q ss_pred hccccc-cCC-CCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCC-CCCc-hHHHHHHHHH
Q 012965 217 SSWTEN-YGD-PSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPND-EEIP-HGFIFATFML 292 (452)
Q Consensus 217 ~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~-~~~~~~~~~i 292 (452)
+|.. +++ .+.+.+ ..+...++|+|..|.+.+...+.....|. ...|+|.++.|. .+.. .|...+...+
T Consensus 183 --lPq~~r~~~~~~~~~-----~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~-~~~WLP~ili~~G~sa~~aG~llsl~~l 254 (395)
T COG2807 183 --LPQALREQAASIATK-----LVSVRKVWRSPLAWQVTLFMGLQSLLYYI-VIGWLPAILIDRGLSAAEAGSLLSLMQL 254 (395)
T ss_pred --hhhcccccccccccc-----cccccccccCchhHHHHHHHHhhHHHHHH-HHHHHHHHHHHcCCCHHHhhhHHHHHHH
Confidence 3332 111 111111 11223578999999999998888888776 699999988653 3332 2788888889
Q ss_pred HHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHH
Q 012965 293 ASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSI 372 (452)
Q Consensus 293 ~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 372 (452)
.+++.++....+.+|...++. .......+..++.+...+.+.. ..+...++.|++.|..+|..
T Consensus 255 ~~~~~~ll~P~la~R~~n~r~-~~~~~~~~~l~G~~G~~~~P~~----------------~~~lw~~llG~G~G~~F~la 317 (395)
T COG2807 255 AQLPTALLIPLLARRSKNQRP-LVVLALLLMLVGLVGLLLAPGQ----------------LPILWALLLGLGQGGAFPLA 317 (395)
T ss_pred HHHHHHHHHHHHHHHhcccch-HHHHHHHHHHHHHHHHHHhhhh----------------HHHHHHHHHhCccchHHHHH
Confidence 999999999999998644442 2333333333333333333322 22333688999999999999
Q ss_pred HHHHhhcCCcccccch-hhhhhh------hhhHHHHHHHhccccC
Q 012965 373 MKMRSQYIPEEARSTI-MNFFRI------PLNIFVCVVLYNVDAF 410 (452)
Q Consensus 373 ~~~~~~~~p~~~r~~~-~g~~~~------~~~~~~~~~l~~~~~~ 410 (452)
...+.+..++.+.+.. .|+.+- +.++...+.+.|.++.
T Consensus 318 L~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gs 362 (395)
T COG2807 318 LTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGS 362 (395)
T ss_pred HHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCC
Confidence 9999988877664432 333332 3566667777777553
No 90
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.86 E-value=3.6e-18 Score=167.31 Aligned_cols=317 Identities=15% Similarity=0.110 Sum_probs=180.9
Q ss_pred HHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccc-cCcchHHHHHHHHHHHHH-HHhcCc-cHHHHHHHHHHHHhH
Q 012965 61 YYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCLTYILSC-ITKHSP-QYKILMIGRILGGIA 137 (452)
Q Consensus 61 ~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr-~Grr~~l~~~~~~~~i~~-l~~~~~-~~~~l~~~r~l~G~~ 137 (452)
.++.+++|++.++.+++.+..........+++|+++|| +|||+++..+.++.+++. ++++++ +.+.+.++|.++|++
T Consensus 46 ~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig 125 (500)
T PRK09584 46 VYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVG 125 (500)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Confidence 34458899999888877665544444445679999999 599999999999998875 566664 566777889999999
Q ss_pred hhhhhhhhhhhhhhhc-c-cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHH---
Q 012965 138 TSLLFSAFESWLVAEH-N-KRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM--- 212 (452)
Q Consensus 138 ~~~~~~~~~~~~i~e~-~-~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~--- 212 (452)
.|...+...+ ++.|. + ++.++.+.. + ....+..+|..++|.+++++.++ ++||+.|.+.++...+..
T Consensus 126 ~g~~~~~~~~-l~~~~f~~~~~~~~~~~----~-~~~~~~~iG~~~gp~i~g~l~~~--~g~~~~F~i~~i~~~i~~i~~ 197 (500)
T PRK09584 126 NGLFKANPSS-LLSTCYEKDDPRLDGAF----T-MYYMSINIGSFFSMLATPWLAAK--YGWSVAFALSVVGMLITVVNF 197 (500)
T ss_pred hhcccCCHHH-HHHHhcCCCchhhhhcc----h-HHHHHHHHHHHHHHHHHHHHHHh--hCHHHHHHHHHHHHHHHHHHH
Confidence 9988877655 77775 2 222222211 1 12234456666677777777654 456777877665333322
Q ss_pred HHHHhccccccCCCCc-chhHHHH---------------------------------------HHH--hhHHhhcchhHH
Q 012965 213 VIILSSWTENYGDPSE-SKDLLTQ---------------------------------------FRG--AAVAIASDEKIA 250 (452)
Q Consensus 213 ~~~~~~~~~~~~~~~~-~~~~~~~---------------------------------------~~~--~~~~~~~~~~~~ 250 (452)
+......+|+.+++++ +.+..+. .++ ..++.. +++.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 276 (500)
T PRK09584 198 AFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKEAFAMKGAA-RRKMI 276 (500)
T ss_pred HHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhhcCHHH-HHHHH
Confidence 2222233332111111 0000000 000 000111 12222
Q ss_pred HHHHHHHhhhchhhhhhhhhcccccc----C-------CCCCchHHHHHHHHHHHHHHhHHHHHHhccCCCC--chhHHH
Q 012965 251 LLGAIQSLFEGSMYTFVFLWTPALSP----N-------DEEIPHGFIFATFMLASMLGSSLASRLMARSPPR--VESYMQ 317 (452)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~p~~~~----~-------~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~--~~~~~~ 317 (452)
.. +...+.....+. .....|..+. + +...+.+...+...+..++..++.+++-+|.++| ..+.+.
T Consensus 277 ~~-~~~~~~~i~f~~-~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~ 354 (500)
T PRK09584 277 VA-FILMLEAIIFFV-LYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFA 354 (500)
T ss_pred HH-HHHHHHHHHHHH-HHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHH
Confidence 21 111111222121 2222333211 1 1122356677777777666666664444444433 222466
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhh
Q 012965 318 IVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (452)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (452)
++..+.++++..........+++ . ....+......++.+++.....|...+++.+..|++.||+.+|....
T Consensus 355 ~G~~l~~l~f~~l~~~~~~~~~~----~--~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l 425 (500)
T PRK09584 355 IGMVLCSGAFLVLPLGAKFANDA----G--IVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFL 425 (500)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC----C--ccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 66777777766654433321100 1 12224677788999999999999999999999999999999998654
No 91
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.86 E-value=3.7e-20 Score=176.72 Aligned_cols=235 Identities=22% Similarity=0.200 Sum_probs=176.5
Q ss_pred hhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHh--cCccHHHHHHHHHHHHhHhhhh
Q 012965 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITK--HSPQYKILMIGRILGGIATSLL 141 (452)
Q Consensus 65 ~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~--~~~~~~~l~~~r~l~G~~~~~~ 141 (452)
.++++|+.|.|.+++..+.+..+...+.|+++||+|.|+++..+.++.+++. +.. ...+++.+++.|+++|++.|..
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~ 145 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVL 145 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHH
Confidence 4688999999999999988888888999999999999999999999999975 553 4456678899999999999999
Q ss_pred hhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHhc
Q 012965 142 FSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSS 218 (452)
Q Consensus 142 ~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 218 (452)
+|+... +.++| ++|++..+ ....|..+|.+++.++++.+.+. .+||+..|++.+.+.++..++....
T Consensus 146 ~pa~~~-i~~~W~P~~Ers~~~a--------il~~g~q~g~v~~mp~sg~lc~s-~~GW~sifY~~g~~g~i~~~~w~~~ 215 (466)
T KOG2532|consen 146 FPAIGS-ILAKWAPPNERSTFIA--------ILTAGSQLGTIITMPVSGLLCES-SLGWPSIFYVFGIVGLIWFILWFLF 215 (466)
T ss_pred Hhhhhc-eeeeECCHHHHHHHHH--------HHHHHHHHHHHHHHHhHHHHhcc-CCCCchHHHHHHHHHHHHHHHHHHH
Confidence 999866 77877 34555433 22334557777777788887764 5788899999888777655443333
Q ss_pred cccccCCCC---cchhH--H-----HH----HHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch-
Q 012965 219 WTENYGDPS---ESKDL--L-----TQ----FRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH- 283 (452)
Q Consensus 219 ~~~~~~~~~---~~~~~--~-----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~- 283 (452)
..|++.+++ ++|.. . ++ ...+++++++++.+|...+.........+. ...|.|.|+++.++.+.
T Consensus 216 ~~d~P~~h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~-l~~y~PtY~~~VL~f~v~ 294 (466)
T KOG2532|consen 216 YSDSPSKHPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYL-LLTYLPTYLKEVLGFDVR 294 (466)
T ss_pred hcCCcccCCCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHH-HHHHhhHHHHHHhCCChh
Confidence 333222211 11110 0 00 122577889999999888777777777665 69999999998887754
Q ss_pred --HHHHHHHHHHHHHHhHHHHHHhccCCC
Q 012965 284 --GFIFATFMLASMLGSSLASRLMARSPP 310 (452)
Q Consensus 284 --~~~~~~~~i~~~~~~~~~g~l~dr~g~ 310 (452)
|...++..+.+.+..+++|.++||..+
T Consensus 295 ~~G~~salP~l~~~~~k~~~g~lsD~l~~ 323 (466)
T KOG2532|consen 295 ETGFLSALPFLAMAIVKFVAGQLSDRLTF 323 (466)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 788888889999999999999999865
No 92
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.85 E-value=2.4e-19 Score=173.32 Aligned_cols=332 Identities=14% Similarity=0.162 Sum_probs=231.0
Q ss_pred chhhHHHHHHHHHHHH-hhhhh---hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHH
Q 012965 36 NSFKNNYLLVYSLMMA-GDWLQ---GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLT 111 (452)
Q Consensus 36 ~~~~~~~~~~~~~~~~-~~~~~---~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~ 111 (452)
..+.|.+....++... .+++. +.+.+.+.++++.+.++++++.++......+.+|+.+.+.||+|.|++.+.+.++
T Consensus 41 GG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v 120 (509)
T KOG2504|consen 41 GGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLV 120 (509)
T ss_pred CCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHH
Confidence 4456666555555544 34443 5566788899999999999999999988889999999999999999999999999
Q ss_pred HHHHH-HHhcCccHHHHHHH-HHHHHhHhhhhhhhhhhhhhhhc--ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 012965 112 YILSC-ITKHSPQYKILMIG-RILGGIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGN 187 (452)
Q Consensus 112 ~~i~~-l~~~~~~~~~l~~~-r~l~G~~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~ 187 (452)
..++. +.++++++|.+++. -++.|+|.+..+..... ++..+ ++|+.. +.....|.++|..+-|.+..
T Consensus 121 ~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiv-iv~~YF~kkR~lA--------~Gia~~GsG~G~~~~~~l~~ 191 (509)
T KOG2504|consen 121 AALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVV-ILGTYFEKKRALA--------TGIAVSGTGVGTVVFPPLLK 191 (509)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhh-hhhhHhHHHHHHH--------HhhhhccCCcceeeHHHHHH
Confidence 99997 67999999877655 78999999999888755 77777 444443 33455678899999999999
Q ss_pred hhhcccCCCcchhhHHHHHHHHHHHHHHHhccccccC-----------------------------CCCcch--------
Q 012965 188 LLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYG-----------------------------DPSESK-------- 230 (452)
Q Consensus 188 ~l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~-------- 230 (452)
.+.+..|| |..+++.+.+.+-.........|...+ +.+...
T Consensus 192 ~l~~~~G~--r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (509)
T KOG2504|consen 192 YLLSKYGW--RGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLA 269 (509)
T ss_pred HHHHHhCc--HHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchh
Confidence 98876655 455655554444333333333340000 000000
Q ss_pred ------hHHH--HHHHhh----HHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---HHHHHHHHHHHH
Q 012965 231 ------DLLT--QFRGAA----VAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASM 295 (452)
Q Consensus 231 ------~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~i~~~ 295 (452)
+..+ ..+... .++++++.++.+.+...+...+.+. ...++|.+.++ .+.+. +...++.++..+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~-p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i 347 (509)
T KOG2504|consen 270 TLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNV-PFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDI 347 (509)
T ss_pred hhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHH-HHHHHHHHHhh-cCCChhhhHHHHHHHHHhhh
Confidence 0000 111111 4678888888888877777777555 47778887763 33332 678888899999
Q ss_pred HHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHH
Q 012965 296 LGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKM 375 (452)
Q Consensus 296 ~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 375 (452)
+++++.|++.|+...++.....++.+..++........... +.......++|+..|.........
T Consensus 348 ~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~---------------~~l~~~~~~fG~~~g~~~~l~~~i 412 (509)
T KOG2504|consen 348 IGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTY---------------VGLIVFSILFGFCVGSFSSLTPVI 412 (509)
T ss_pred hhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccH---------------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999987555333344444444444332222222 366777888899999877888889
Q ss_pred HhhcCCcccccchhhhhhhh
Q 012965 376 RSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 376 ~~~~~p~~~r~~~~g~~~~~ 395 (452)
+.|..+.++-..+.|+..+.
T Consensus 413 ~~~~~g~~~l~~a~Gl~l~~ 432 (509)
T KOG2504|consen 413 LVDLVGLEKLSNAYGLLLLF 432 (509)
T ss_pred HHHHcChhhcchHHHHHHHH
Confidence 99999999988888886664
No 93
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.85 E-value=1.2e-17 Score=159.57 Aligned_cols=380 Identities=15% Similarity=0.095 Sum_probs=216.7
Q ss_pred HHhhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhcccccccccc----ccCcchHHHHHHHHH-HHHH-HHhcCcc
Q 012965 50 MAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLAD----KQGRKRACVTYCLTY-ILSC-ITKHSPQ 123 (452)
Q Consensus 50 ~~~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~D----r~Grr~~l~~~~~~~-~i~~-l~~~~~~ 123 (452)
.++..++.++++++.+++|.+..+.+.+.....+.+.+..|+.|+++| |+||||.++.+..+. +++. +++++++
T Consensus 17 q~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~ 96 (477)
T TIGR01301 17 QFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAAD 96 (477)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCch
Confidence 345566688888888999999999999999999999999999999999 599999998864444 4454 5566665
Q ss_pred HH-----------------HHHHHHHHHHhHhhhhhhhhhhhhhhhcc-cccchhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 012965 124 YK-----------------ILMIGRILGGIATSLLFSAFESWLVAEHN-KRGFEQQWLSITFSKAIFLGNGLVAILSGLF 185 (452)
Q Consensus 124 ~~-----------------~l~~~r~l~G~~~~~~~~~~~~~~i~e~~-~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l 185 (452)
.+ ..+++-.+..++.....+...+ +++|.. ++.++.+......+....+|..+|..++...
T Consensus 97 ~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rA-LiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~ 175 (477)
T TIGR01301 97 IGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRA-FLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYS 175 (477)
T ss_pred hhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43 2233333444577766666655 788772 2222222222223333444444444444332
Q ss_pred h--h---hh----hcccCCCcchhhHHHHHHHHHHHHHHHhccccccCCCCcc-------hh----HHHHHHHhhHHhhc
Q 012965 186 G--N---LL----VDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSES-------KD----LLTQFRGAAVAIAS 245 (452)
Q Consensus 186 ~--~---~l----~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~----~~~~~~~~~~~~~~ 245 (452)
. . .. .+....+.+..|.+.+++.++...+.....+|++..+++. +. ..+..++-++.+.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 255 (477)
T TIGR01301 176 GLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPSKHGEEAFFGELFGAFKY 255 (477)
T ss_pred hHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhcccccccchhhhHHHHHHHHHH
Confidence 1 0 00 0011125577888888888877777776777754311110 00 01111222233333
Q ss_pred c-hhHHHHHHHHHhhhchhhhhhhhhccccc-cCCCCC--------chH-----HHHHHHHHHHHHHhHHHHHHhccCCC
Q 012965 246 D-EKIALLGAIQSLFEGSMYTFVFLWTPALS-PNDEEI--------PHG-----FIFATFMLASMLGSSLASRLMARSPP 310 (452)
Q Consensus 246 ~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~--------~~~-----~~~~~~~i~~~~~~~~~g~l~dr~g~ 310 (452)
- +..+.++...++...+.+.+ ..|.+.+. ++.++. +.| +....+++...+.+++..++.+|+|+
T Consensus 256 mP~~m~~l~~vqffsW~a~f~~-~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~ 334 (477)
T TIGR01301 256 LPRPVWILLLVTCLNWIAWFPF-ILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGA 334 (477)
T ss_pred CCHHHHHHHHHHHHHHHHHHHH-HHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3 34555666666666665554 44444443 222221 122 23344455566777888999999986
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHhhhcC---CCCcCCCCcc---cchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCccc
Q 012965 311 RVESYMQIVFVVSSVSLLLPIVTSFLVA---PSNVKSGGIS---FSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA 384 (452)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~ 384 (452)
|+. ....+..+.++++....+.....+ +.+.++..+. ...+..++.+...|+..+..+...++++++..|++.
T Consensus 335 ~k~-~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~ 413 (477)
T TIGR01301 335 GKR-LWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLG 413 (477)
T ss_pred chh-HHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccC
Confidence 441 234554455555555443332110 1000001111 112466777888999999999999999999999644
Q ss_pred --ccchhhhhhhhhhH------HHHHHHhccccCCchHHHHHHHHHHHHHHHHHHh
Q 012965 385 --RSTIMNFFRIPLNI------FVCVVLYNVDAFPITVMFGMCSIFLLVASVLQRR 432 (452)
Q Consensus 385 --r~~~~g~~~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (452)
.|..+|+.|...-. +..+.+....+.+....+.+.++..+++.+...+
T Consensus 414 ~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~ 469 (477)
T TIGR01301 414 AGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALI 469 (477)
T ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHH
Confidence 57888998875221 2233344444444555666666666555554443
No 94
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.84 E-value=5.6e-20 Score=163.92 Aligned_cols=231 Identities=20% Similarity=0.216 Sum_probs=171.6
Q ss_pred hhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHHhHhhhhhh
Q 012965 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFS 143 (452)
Q Consensus 65 ~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~ 143 (452)
.+.+-+++++|+++..-.+...+.+|+.|.+.||+|+|..+++|..++..++ +.++.++++.++++|.+||+|.+....
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~t 178 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADT 178 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHh
Confidence 4566678899999999888899999999999999999999999999999976 779999999999999999999999999
Q ss_pred hhhhhhhhhc----ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHhcc
Q 012965 144 AFESWLVAEH----NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSW 219 (452)
Q Consensus 144 ~~~~~~i~e~----~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 219 (452)
+..+ +++|. ++|++.++..-. +.++|..++|++++.+.+..|. +.+|.+.+.+.++...+.+...
T Consensus 179 sgla-mlAd~f~~d~er~~vmGialg--------fislG~lvgPpfGGilYe~~Gk--~aPFlVL~~v~Lld~~L~l~vi 247 (464)
T KOG3764|consen 179 SGLA-MLADVFPEDNERGSVMGIALG--------FISLGVLVGPPFGGILYEFAGK--SAPFLVLAIVLLLDGALQLLVI 247 (464)
T ss_pred hhHH-HHHHHcccchhhhHHHHHHHH--------HHhccceecCCcccchHhhcCC--cCcHHHHHHHHHHHHHHHHhee
Confidence 8877 76665 445665553322 3457778888999988876544 6899999998888877776555
Q ss_pred ccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCC---chHHHHHHHHHHHHH
Q 012965 220 TENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI---PHGFIFATFMLASML 296 (452)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~---~~~~~~~~~~i~~~~ 296 (452)
+.++.++++.++ ..+.++++++|..+.........+.. ..+..--++.+..|.... ..|..+....+...+
T Consensus 248 ~p~~~~~~~~~~-----~~~~~~Ll~dP~I~~~agai~~~n~~-lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~i 321 (464)
T KOG3764|consen 248 EPTEMDPDSTEQ-----GTPMWSLLMDPYILLIAGAITFSNSS-LAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAI 321 (464)
T ss_pred CccccCcccccc-----CccHHHHHhCchHhhhhcchhhccch-HHHhCcccHHHHHHhccCCCcceeeeecccccchhc
Confidence 443333322111 22345678888887776665555544 333344444444454442 336777777788999
Q ss_pred HhHHHHHHhccCCCCc
Q 012965 297 GSSLASRLMARSPPRV 312 (452)
Q Consensus 297 ~~~~~g~l~dr~g~~~ 312 (452)
++.+.|.+.||++..+
T Consensus 322 g~~lfg~la~k~~~~~ 337 (464)
T KOG3764|consen 322 GTNLFGKLADKYPHLR 337 (464)
T ss_pred cCchHHHHHHhcCchh
Confidence 9999999999998555
No 95
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.84 E-value=8.9e-20 Score=182.54 Aligned_cols=265 Identities=13% Similarity=0.140 Sum_probs=175.9
Q ss_pred hhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCc----------
Q 012965 54 WLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSP---------- 122 (452)
Q Consensus 54 ~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~---------- 122 (452)
++..+.++.+.++++++..+.|++.+...+...+..++.|++.||+||||.+.++.++++++. +.++.+
T Consensus 50 g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~ 129 (633)
T TIGR00805 50 GLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYST 129 (633)
T ss_pred HHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccc
Confidence 344777888999999999999988888888777888899999999999999999999999986 545432
Q ss_pred -----------------------------------------cHHHHHHHHHHHHhHhhhhhhhhhhhhhhhcccccchhh
Q 012965 123 -----------------------------------------QYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQ 161 (452)
Q Consensus 123 -----------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~ 161 (452)
.+..++++|+++|+|.+..++...+ ++.|+.++.++..
T Consensus 130 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~-~i~d~~~~~~~~~ 208 (633)
T TIGR00805 130 TVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGIS-YIDDFAKSKNSPL 208 (633)
T ss_pred cccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCch-hhhccCCccccHH
Confidence 2457789999999999999999866 8998833333222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhccc-C-----------------C--CcchhhHHHHHHHHHHHHHHHhcccc
Q 012965 162 WLSITFSKAIFLGNGLVAILSGLFGNLLVDSF-S-----------------L--GPVAPFDAAACFLAIGMVIILSSWTE 221 (452)
Q Consensus 162 ~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~-~-----------------~--~~~~~f~~~~~~~~~~~~~~~~~~~~ 221 (452)
..+ ..... ..+|+.+++.+++.+.+.. + | .|+..|++.+++.++..+... ..|+
T Consensus 209 ~~~-i~~~~----~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~-~~p~ 282 (633)
T TIGR00805 209 YIG-ILESI----AVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFF-FFPK 282 (633)
T ss_pred HHH-HHHHH----HHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH-hCcc
Confidence 222 22223 3344444445444443321 1 1 266778777766665544333 3343
Q ss_pred ccCCC----C----cch--------------hHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCC
Q 012965 222 NYGDP----S----ESK--------------DLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDE 279 (452)
Q Consensus 222 ~~~~~----~----~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 279 (452)
+.+++ + +.+ +..++..+..+.++++|.++...+...+.....+. ...|.|.|+++.+
T Consensus 283 ~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~-~~~~lP~yl~~~~ 361 (633)
T TIGR00805 283 ALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNG-YITFLPKYLENQY 361 (633)
T ss_pred ccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHc
Confidence 22111 0 000 00112233456788999988888777777766665 5889999999888
Q ss_pred CCchH---HHHHHHHH-HHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHH
Q 012965 280 EIPHG---FIFATFML-ASMLGSSLASRLMARSPPRVESYMQIVFVVSSVS 326 (452)
Q Consensus 280 ~~~~~---~~~~~~~i-~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 326 (452)
+.++. .+.....+ +.+++.+++|+++||++.+..+.+..+.....+.
T Consensus 362 g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~ 412 (633)
T TIGR00805 362 GISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLS 412 (633)
T ss_pred CCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHH
Confidence 88763 44444444 5678999999999999866544444444433333
No 96
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.83 E-value=6.9e-19 Score=155.07 Aligned_cols=329 Identities=14% Similarity=0.094 Sum_probs=195.9
Q ss_pred cchhhHHHHHHHHHHHHhhhhh----hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHH
Q 012965 35 FNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCL 110 (452)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~----~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~ 110 (452)
+.+++|..........+.+.+. .-+.|...+.+|.+..|...+....+....+++..+|.++|++|||+.+.....
T Consensus 72 fgrfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l 151 (528)
T KOG0253|consen 72 FGRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFL 151 (528)
T ss_pred cccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHH
Confidence 4567777766666666665555 334455567889888888888777777777888899999999999999999998
Q ss_pred HHHHH-HHHhcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 012965 111 TYILS-CITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFG 186 (452)
Q Consensus 111 ~~~i~-~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~ 186 (452)
...+. .+.+.++|+..+.+.|.+.|+|.|+ .|...+ +-.|. .+|....-.. .-..+|.+....+.
T Consensus 152 ~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~-~yle~lp~~~r~~~~V~~---------~~waig~v~ea~la 220 (528)
T KOG0253|consen 152 VTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSA-IYLEFLPSSHRWLLTVMS---------FFWAIGQVFEALLA 220 (528)
T ss_pred HHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHH-HHHHhccCcCCCcchhHH---------HHHHHHHHHHHHHH
Confidence 88874 5779999999999999999999999 677656 44444 3344322211 23456667776776
Q ss_pred hhhhcccCCCcchhhHHHHHHHHHHHHHHHhccccccC------CCCcchhHHHHHH-----------------------
Q 012965 187 NLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYG------DPSESKDLLTQFR----------------------- 237 (452)
Q Consensus 187 ~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~----------------------- 237 (452)
-....+.||+|++.+.. ..+.+.+ . ..++.||.++ +++++-+..+++.
T Consensus 221 w~vm~~~gwr~~l~~~~-~pl~~~a-~-f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e 297 (528)
T KOG0253|consen 221 WGVMSNFGWRYLLFTSS-TPLMFAA-R-FLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQE 297 (528)
T ss_pred HHHHHhhhHHHHHHHHH-hHHHHHH-H-HHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhh
Confidence 66666677776643332 2222222 2 2235566432 1111111111100
Q ss_pred ----------------HhhHHhhcchhHHHH---HHHHHhhhchhhhhhh-----------------hhccccccCCC--
Q 012965 238 ----------------GAAVAIASDEKIALL---GAIQSLFEGSMYTFVF-----------------LWTPALSPNDE-- 279 (452)
Q Consensus 238 ----------------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-----------------~~~p~~~~~~~-- 279 (452)
.....++. |++... .....+.+...|+... ...|...+...
T Consensus 298 ~~~~~~~~~~a~ke~rg~~~nLls-p~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c 376 (528)
T KOG0253|consen 298 ESDLDDSKSSAAKEVRGGTTNLLS-PKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANC 376 (528)
T ss_pred hhchhhhhhccccccccchHhhcC-hHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcC
Confidence 00011111 111111 1111111111111111 12222222110
Q ss_pred CCc-h-H-HHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHH
Q 012965 280 EIP-H-G-FIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLL 356 (452)
Q Consensus 280 ~~~-~-~-~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (452)
..+ . . .-........++|.++.+++.||+|||++ +.....+.++....+...... ....+
T Consensus 377 ~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkT--Mal~l~~f~iflfll~~c~~r---------------n~~tv 439 (528)
T KOG0253|consen 377 PLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKT--MALSLILFGIFLFLLTTCKTR---------------NAYTV 439 (528)
T ss_pred CccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhH--HHHHHHHHHHHHHHHHHhcCc---------------chhHH
Confidence 111 1 1 12234567899999999999999999984 555555555544443322211 13345
Q ss_pred HHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 357 GFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 357 ~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
..+...++....+...+.|..|.+|+..|+++.|..+..
T Consensus 440 llf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsm 478 (528)
T KOG0253|consen 440 LLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSM 478 (528)
T ss_pred HHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhH
Confidence 556666677777788899999999999999999887754
No 97
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.82 E-value=1.2e-20 Score=171.16 Aligned_cols=374 Identities=13% Similarity=0.070 Sum_probs=207.7
Q ss_pred HHHHHHHHHHHhhhhh-------hhhHHHHHh-hc----CCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHH
Q 012965 41 NYLLVYSLMMAGDWLQ-------GPYVYYLYS-TY----GFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTY 108 (452)
Q Consensus 41 ~~~~~~~~~~~~~~~~-------~p~l~~i~~-~~----g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~ 108 (452)
..+.+.....+.|.++ .|++..++- .. ++++...+.+..+.+++..+++++.|++.||+|||+++...
T Consensus 41 k~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~ 120 (538)
T KOG0252|consen 41 KAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKE 120 (538)
T ss_pred HHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHH
Confidence 3555556666677777 344333331 11 14444556676777776777778999999999999999999
Q ss_pred HHHHHHHH-HHhcCc-------cHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHH
Q 012965 109 CLTYILSC-ITKHSP-------QYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGL 177 (452)
Q Consensus 109 ~~~~~i~~-l~~~~~-------~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~i 177 (452)
++++.+++ +++++. -.+++...|++.|+|.|+.+|...+ +.+|. ++|+...+..-.....+...|..+
T Consensus 121 liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAt-I~SE~an~~~RGa~iaavFa~Qg~GilaG~iv 199 (538)
T KOG0252|consen 121 LIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSAT-IMSESANKKTRGAFIAAVFAMQGFGILAGGIV 199 (538)
T ss_pred HHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHH-HhhhhhhhccccceeEEEEEecchhHhhccHH
Confidence 99999876 555532 2358889999999999999999844 88988 567777766666666666666655
Q ss_pred HHHHHHhhhhhhhc-----ccCCCcchhhHHHHHHHHHHHHHHHhccccccCCC-----C--cc-hhHHHHHH-------
Q 012965 178 VAILSGLFGNLLVD-----SFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDP-----S--ES-KDLLTQFR------- 237 (452)
Q Consensus 178 g~~~~~~l~~~l~~-----~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~-~~~~~~~~------- 237 (452)
+.++...+-..+.+ +.+.-||..+.+.++..+..+...+ .+||++.-+ + .+ ++.++...
T Consensus 200 t~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl-~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~ 278 (538)
T KOG0252|consen 200 ALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRL-KMPETARYTALVSKKLKQAAGDMKKVLSVDIEAES 278 (538)
T ss_pred HHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhh-cCCcchhHHHHhhcCHhhhhhccccccccccchhh
Confidence 55554444333222 1223489888888777777666655 677754321 0 00 00000000
Q ss_pred ----------Hh---hHHhhcc---hhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch-----------HHHHHHH
Q 012965 238 ----------GA---AVAIASD---EKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH-----------GFIFATF 290 (452)
Q Consensus 238 ----------~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-----------~~~~~~~ 290 (452)
+. +...+.. ++.+..+...++.....|.. ..+....+++ .+..+ +....+.
T Consensus 279 ~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~-nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~~ii 356 (538)
T KOG0252|consen 279 TAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQ-NLFQSVIFSA-IGVIPSANTYHELFKVAEGNLII 356 (538)
T ss_pred ccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc-ccHHHHHHHh-hccCCCcchHHHHHHHHHHHHHH
Confidence 00 0011111 12222233333334444442 3333333321 11111 1111111
Q ss_pred -HHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHH-HHhhch
Q 012965 291 -MLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFE-ACVGIF 368 (452)
Q Consensus 291 -~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~ 368 (452)
..+.++|..+...++|++||+. +.+.++.+..+..+......+.. ... ....+...+.. ++.-..
T Consensus 357 a~~~~vPGyw~tv~~id~iGRk~--iq~~GF~~~~i~~~~~~~~y~~~-------~~~----~Gf~v~y~l~~ff~NFGP 423 (538)
T KOG0252|consen 357 AVCSTVPGYWFTVYFIDIIGRKY--IQLMGFFIMTIFFFVIAGPYNQL-------ENT----IGFVVLYSLTFFFGNFGP 423 (538)
T ss_pred HHHccCCceeEEEEEeehhhhHH--HHHhhHHHHHHHHHHHcCCcccc-------ccc----CceeehHHHHHHHHhcCC
Confidence 2335557777888999999988 35556666555555543322210 011 12222222222 233334
Q ss_pred hhHHHHHHhhcCCcccccchhhhhhhh--hhHHHHHHH--hccc-----cCCchHHHHHHHHHHHHHHHHHH
Q 012965 369 WPSIMKMRSQYIPEEARSTIMNFFRIP--LNIFVCVVL--YNVD-----AFPITVMFGMCSIFLLVASVLQR 431 (452)
Q Consensus 369 ~~~~~~~~~~~~p~~~r~~~~g~~~~~--~~~~~~~~l--~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 431 (452)
......+.+|.+|.+.|++..|+.... .+..++... .... ..+....+.+.+.+.....+...
T Consensus 424 n~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~ 495 (538)
T KOG0252|consen 424 NATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTL 495 (538)
T ss_pred CceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeE
Confidence 466677889999999999999987764 344444322 2211 23445555555555555444433
No 98
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.82 E-value=8.7e-19 Score=155.47 Aligned_cols=308 Identities=16% Similarity=0.153 Sum_probs=173.5
Q ss_pred hHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhh
Q 012965 74 IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAE 152 (452)
Q Consensus 74 ~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e 152 (452)
.|.+.+...+...+.++.+|.++||+|||++++++++..+++. +.+.+.|+..+.++|++.|+..|...+.. + +++|
T Consensus 70 aGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~r-A-iisd 147 (451)
T KOG2615|consen 70 AGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVIR-A-IISD 147 (451)
T ss_pred hhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHH-H-HHHh
Confidence 3455555556666888999999999999999999999999986 66999999777777999999999886654 5 8777
Q ss_pred c---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHH----HHHHHHHHHHHHhccccccCC
Q 012965 153 H---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAA----ACFLAIGMVIILSSWTENYGD 225 (452)
Q Consensus 153 ~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~----~~~~~~~~~~~~~~~~~~~~~ 225 (452)
. +.|+..++..+..++ +|..+||++|+.+..+. +..+ +++|... .++..........+.||+-+.
T Consensus 148 V~sek~r~l~ms~v~~a~~----lGfilGPmIGgyla~f~-~~~g---~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~ 219 (451)
T KOG2615|consen 148 VVSEKYRPLGMSLVGTAFG----LGFILGPMIGGYLAQFS-SISG---SYPFALPCLLVFILAAGDVTFFPWFLPETLPL 219 (451)
T ss_pred hcChhhccceeeeeehhhh----cchhhcchhhhHHHhhH-hhhc---cCchHHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence 6 667777765555444 33334444444433321 1122 2334332 222222233334467775433
Q ss_pred CCcc---hhHH------HHHHH----hhHHhhcchhHHH------HHHHHHhhhchhhhhhhhhccccccCCCCCch---
Q 012965 226 PSES---KDLL------TQFRG----AAVAIASDEKIAL------LGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH--- 283 (452)
Q Consensus 226 ~~~~---~~~~------~~~~~----~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~--- 283 (452)
+++. .+.. ++..+ ......||++... .....-+.+...+....++.+.+.+++++.++
T Consensus 220 rk~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~ 299 (451)
T KOG2615|consen 220 RKRNDEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQ 299 (451)
T ss_pred hhhcccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhh
Confidence 2222 1000 00000 0111233433222 11111122222233334444555566677655
Q ss_pred HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHH
Q 012965 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (452)
Q Consensus 284 ~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 363 (452)
|.++...++.+.+.+....+..||.... ..+.....+.++.+.+......+ . ...+..+..+..+
T Consensus 300 G~vl~~tGl~m~~~ql~~~~~l~~~~~~-----~~a~l~~~l~~~vP~~llls~~~------~----~~~l~~~s~l~sf 364 (451)
T KOG2615|consen 300 GKVLSTTGLLMLVIQLALVPILPRYKGN-----IKAVLLFSLLLIVPAFLLLSLAR------T----PVVLYLGSTLKSF 364 (451)
T ss_pred eeeeehhhHHHHHHHHhccccccccccc-----hhhHHHHHHHHHHHHHHHHhccc------c----chhhhHHHHHHHH
Confidence 5566666666665555555555554311 11222222222222222211100 0 0356777888888
Q ss_pred HhhchhhHHHHHHhhcCCcccccchhhhhhhh------hhHHHHHHHhc
Q 012965 364 CVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYN 406 (452)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~ 406 (452)
......+....+.....|+++||+.+|+.+.. .++++++....
T Consensus 365 ~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 365 STASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred HHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 88888899999999999999999999987764 45566655543
No 99
>PRK09669 putative symporter YagG; Provisional
Probab=99.81 E-value=3.1e-17 Score=159.35 Aligned_cols=297 Identities=13% Similarity=0.106 Sum_probs=170.9
Q ss_pred HHHhhcCCCcchhHHHHHHHHhhhhhccccccccccc----cCcchH-HHHHHHHHHHHH-HHhcCcc------HHHHHH
Q 012965 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK----QGRKRA-CVTYCLTYILSC-ITKHSPQ------YKILMI 129 (452)
Q Consensus 62 ~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr----~Grr~~-l~~~~~~~~i~~-l~~~~~~------~~~l~~ 129 (452)
...+++|+|+.++|.++++..+...+..|+.|.++|| +||||. ++.+.+..+++. ++...++ .+.+++
T Consensus 35 ~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~ 114 (444)
T PRK09669 35 FYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACV 114 (444)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHH
Confidence 3447899999999999999999999999999999998 787555 445666666654 3333332 345556
Q ss_pred HHHHHHhHhhhhhhhhhhhhhhhc----ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc-ccCCCcchhhHHH
Q 012965 130 GRILGGIATSLLFSAFESWLVAEH----NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD-SFSLGPVAPFDAA 204 (452)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~e~----~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~-~~~~~~~~~f~~~ 204 (452)
...+.+.+.......-.+ +.+|. ++|.+..+ .......+|..+++.+..++...+.+ ....+|+..+.+.
T Consensus 115 ~~~l~~~~~t~~~ip~~a-l~~~~t~~~~eR~~l~~----~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~ 189 (444)
T PRK09669 115 TYILLSLVYTAINVPYCA-MPGAITNDPRERHSLQS----WRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVM 189 (444)
T ss_pred HHHHHHHHHHhhcchHHH-hHHHhcCCHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHH
Confidence 666666665555544434 66555 33333222 23334445555555544444443321 1124667667666
Q ss_pred HHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch-
Q 012965 205 ACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH- 283 (452)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~- 283 (452)
+++..+..+......+|+..+++++ .++..+..+..+|||+++.+.....+...... ......+.|.+...+.+.
T Consensus 190 ~ii~~v~~~~~~~~~~e~~~~~~~~---~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~-~~~~~~~y~~~~~~~~~~~ 265 (444)
T PRK09669 190 GLLGVVLFFCCFFMTKERYTPEVDN---SSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVV-TRGGATLYYVNYVLLRPDL 265 (444)
T ss_pred HHHHHHHHHHHhCCeEEecCCCCcC---CCCHHHHHHHHhCCchHHHHHHHHHHHHHHHH-HHhhhhheeeeeecCCHHH
Confidence 6666655554444445543222211 12234566778888887776555443332221 112223333333333222
Q ss_pred -HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHH
Q 012965 284 -GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFE 362 (452)
Q Consensus 284 -~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 362 (452)
+.......+..+++.++.+++.||+|+|+. ...+.....+........... + .+...+..++.+
T Consensus 266 ~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~--~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~~i~g 330 (444)
T PRK09669 266 ATLFLVTGMIAGLFGALLSERLLGKFDRVRA--FKWTIVAFVILSALIFFIPPS---------N----VWLIFALNILFN 330 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhChHHH--HHHHHHHHHHHHHHHHHhCcc---------h----HHHHHHHHHHHH
Confidence 334444456778888999999999998873 333333222222211111110 0 124566677889
Q ss_pred HHhhchhhHHHHHHhhcCCc
Q 012965 363 ACVGIFWPSIMKMRSQYIPE 382 (452)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~p~ 382 (452)
++.+...+..+++.+|..+.
T Consensus 331 ~~~~~~~~~~~am~ad~~d~ 350 (444)
T PRK09669 331 FIQNLTTPLQWSMFSDVVDY 350 (444)
T ss_pred HHHHHHHHHHHHHHHhhhhh
Confidence 99998889999999999863
No 100
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.79 E-value=4.6e-17 Score=150.90 Aligned_cols=338 Identities=13% Similarity=0.068 Sum_probs=189.4
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHhh-cCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHH--HH-H
Q 012965 42 YLLVYSLMMAGDWLQGPYVYYLYST-YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL--SC-I 117 (452)
Q Consensus 42 ~~~~~~~~~~~~~~~~p~l~~i~~~-~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i--~~-l 117 (452)
.-...+...+..+...|+.+.-.++ .|+|.+|+|.+++...+...+.+|+.|.++||+|.||-++.......+ +. .
T Consensus 12 ~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff 91 (412)
T PF01306_consen 12 LSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFF 91 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHH
Confidence 3334444444555557887666664 899999999999999999999999999999999977766555433322 32 1
Q ss_pred H-hcC----ccHH-HHHHHHHHHHhHhhhhhhhhhhhhhhhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 012965 118 T-KHS----PQYK-ILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLV 190 (452)
Q Consensus 118 ~-~~~----~~~~-~l~~~r~l~G~~~~~~~~~~~~~~i~e~-~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~ 190 (452)
. .+. .|.+ ..+++-...|+......|..++ +..+. ++.+...+..+..-+ +|.+++..+++.+.
T Consensus 92 ~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea-~~er~sr~~~feYG~~R~wGS--------ig~ai~s~~~G~L~ 162 (412)
T PF01306_consen 92 IYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEA-YAERVSRRNGFEYGRARMWGS--------IGFAIASLLAGILF 162 (412)
T ss_dssp HHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHH-HHHHHHHHHSS-HHHHHHHHH--------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHH-HHHHHHHHhcCCcchHHHHhh--------HHHHHHHHHhheee
Confidence 1 222 2322 2233333334444444444444 43333 333444444443322 44444445555544
Q ss_pred cccCCCcchhhHHHHHHHHHHHHHHHhccccccCCC--Ccc--hhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhh
Q 012965 191 DSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDP--SES--KDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTF 266 (452)
Q Consensus 191 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (452)
+. +....|++.....++...+.....|+++++. ++. .+..+...++..+++|+|++|.+.+...........
T Consensus 163 ~i---~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~v- 238 (412)
T PF01306_consen 163 NI---NPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAKKDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDV- 238 (412)
T ss_dssp HH---HHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS------HHHHHHHTTSHHHHHHHHHHHHHHHHHHH-
T ss_pred ee---CccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccCCCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHH-
Confidence 32 2345666655554444444443333322211 111 111111123456788999999887665544443332
Q ss_pred hhhhccccccCCCCC-----c-hHHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 012965 267 VFLWTPALSPNDEEI-----P-HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPS 340 (452)
Q Consensus 267 ~~~~~p~~~~~~~~~-----~-~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (452)
.....|.|.....+. . .|...+...+.+++.-.+.+++.+|+|.|+ .+++...+..+=.....+....
T Consensus 239 fdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~--~Lllag~i~~iRi~~~~~~~~~---- 312 (412)
T PF01306_consen 239 FDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKN--LLLLAGVIMAIRIIGSGFATNP---- 312 (412)
T ss_dssp HHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH--HHHHHHHHHHHHHHHHHT--SH----
T ss_pred HHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHh--HHHHHHHHHHHHHHHHhhhcch----
Confidence 222234444322221 1 266777777889999999999999999887 3666655555555554433333
Q ss_pred CcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhh-hhh------hHHHHHHHhcccc
Q 012965 341 NVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFR-IPL------NIFVCVVLYNVDA 409 (452)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~-~~~------~~~~~~~l~~~~~ 409 (452)
+.+...-.+.++-.........-++.+.+|++..++...+.. ++. -...++.++|..|
T Consensus 313 -----------~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G 377 (412)
T PF01306_consen 313 -----------WVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIG 377 (412)
T ss_dssp -----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcC
Confidence 577788889999999888889999999999999888776642 321 1244566677644
No 101
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.79 E-value=4e-17 Score=157.87 Aligned_cols=312 Identities=17% Similarity=0.146 Sum_probs=198.9
Q ss_pred HHHhhcCCCcchhHHHHHHHHhhhhhcccccccccc----ccCcchHHH-HHHHHHHHHH-HHhcC-c-------cHHHH
Q 012965 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLAD----KQGRKRACV-TYCLTYILSC-ITKHS-P-------QYKIL 127 (452)
Q Consensus 62 ~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~D----r~Grr~~l~-~~~~~~~i~~-l~~~~-~-------~~~~l 127 (452)
...+..|+++..+|.+....-+...+..|+.|.++| |+||||..+ .+....+++. ++... + ....+
T Consensus 27 f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~ 106 (428)
T PF13347_consen 27 FYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWL 106 (428)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHH
Confidence 344667999999999999999999999999999999 899777665 5666667765 43333 3 22345
Q ss_pred HHHHHHHHhHhhhhhhhhhhhhhhhc----ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccC-CCcchhhH
Q 012965 128 MIGRILGGIATSLLFSAFESWLVAEH----NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS-LGPVAPFD 202 (452)
Q Consensus 128 ~~~r~l~G~~~~~~~~~~~~~~i~e~----~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~-~~~~~~f~ 202 (452)
.+.-++..++.........+ +..|. ++|.+..+. ......+|..+...+.+.+...+.+... .+|+....
T Consensus 107 ~~~~~l~~~~~t~~~i~~~a-l~~~lt~~~~~R~~l~~~----~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~ 181 (428)
T PF13347_consen 107 FVFYILFDIAYTFVQIPYNA-LIPELTPDPDERTRLSSW----RMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMAL 181 (428)
T ss_pred HHHHHHHHHhhhhccCchhh-cCccccccHhhhhhHHHH----HHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHH
Confidence 66666677777777666545 55554 444444332 2333334443444444444433332222 25777777
Q ss_pred HHHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCc
Q 012965 203 AAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP 282 (452)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 282 (452)
+.+++..+.........+|++++.++ ++.+.+.++..+++++||+++.+.....+....... .....+.|.++..+.+
T Consensus 182 v~~iv~~v~~~i~~~~~ke~~~~~~~-~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~-~~~~~~y~~~~vl~~~ 259 (428)
T PF13347_consen 182 VLAIVGLVFFLITFFFVKERSVEVTE-QEKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFAL-MNTFLPYYFTYVLGNE 259 (428)
T ss_pred HHHHHHHHHhhhhhheeeeccccccc-cccccccccchhhhcccchHHHHHHHHHHHHhhhhh-hhhHHHHHHHHHhcCc
Confidence 77777777666666566773222222 222334566777888998888776666555444332 3444455555444433
Q ss_pred --hHHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHH
Q 012965 283 --HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCT 360 (452)
Q Consensus 283 --~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (452)
.+.......+..+++.++.++++||+|+|+. ...+..+..+......+.... + .+...+...+
T Consensus 260 ~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~--~~~~~~~~~~~~~~~~~~~~~-~------------~~~~~i~~~l 324 (428)
T PF13347_consen 260 GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKV--YIIGLLLAALGFLLLFFLGPG-S------------PWLVLILFIL 324 (428)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHccceee--hhhhHHHHHHHHHHHHHHHhh-h------------HHHHHHHHHH
Confidence 2555666778899999999999999999983 555555555555554444311 0 1477788889
Q ss_pred HHHHhhchhhHHHHHHhhcCCccc-------ccchhhhhhhh
Q 012965 361 FEACVGIFWPSIMKMRSQYIPEEA-------RSTIMNFFRIP 395 (452)
Q Consensus 361 ~g~~~~~~~~~~~~~~~~~~p~~~-------r~~~~g~~~~~ 395 (452)
.+++.+..+...+++.+|..+.++ .|..+|+.++.
T Consensus 325 ~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~ 366 (428)
T PF13347_consen 325 AGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFF 366 (428)
T ss_pred hHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhh
Confidence 999999999999999999987543 34445665553
No 102
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.78 E-value=1.3e-15 Score=146.59 Aligned_cols=343 Identities=12% Similarity=0.087 Sum_probs=199.5
Q ss_pred HHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHH-HH-HHhc-Ccc-HHHHHHHHHHHHhHhhhhhhhhhhhhh
Q 012965 75 GQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL-SC-ITKH-SPQ-YKILMIGRILGGIATSLLFSAFESWLV 150 (452)
Q Consensus 75 g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i-~~-l~~~-~~~-~~~l~~~r~l~G~~~~~~~~~~~~~~i 150 (452)
+...++..+...+..|+.|.++|+-|+||.++.......+ ++ ...+ .++ ++...+.-++.-++.+.......+ ++
T Consensus 73 ~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna-~L 151 (477)
T PF11700_consen 73 LYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA-YL 151 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH-Hh
Confidence 4556677777778889999999999988877766655544 43 3333 344 433344444444454444444433 55
Q ss_pred hhcccccchh-hH---------------------HHHHHHHHHHHHHHHHHHHHHhhhhhhhcc------cCCCcchhhH
Q 012965 151 AEHNKRGFEQ-QW---------------------LSITFSKAIFLGNGLVAILSGLFGNLLVDS------FSLGPVAPFD 202 (452)
Q Consensus 151 ~e~~~r~~~~-~~---------------------~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~------~~~~~~~~f~ 202 (452)
.|..++.... +. .....+.+...|+ +|.++.-.+.-.+... ..+.-|..+.
T Consensus 152 P~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy-~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~ 230 (477)
T PF11700_consen 152 PDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGY-IGGLVALLISLLLVISPGSTASNTWAIRVAFL 230 (477)
T ss_pred HhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHH-HHHHHHHHHHHHHHHcCCCccccchhhhHHHH
Confidence 5541111110 00 0112333333333 3333322222221111 1234566777
Q ss_pred HHHHHHHHHHHHHHhccccccC-CCCc-ch----hHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhcccccc
Q 012965 203 AAACFLAIGMVIILSSWTENYG-DPSE-SK----DLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSP 276 (452)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 276 (452)
..++..++..+......||+++ ++.+ .+ ...++..+..+++.|+|....+.+..++..-+... +......|.+
T Consensus 231 ~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~t-i~~~~~i~a~ 309 (477)
T PF11700_consen 231 IVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNT-IISFAGIYAT 309 (477)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 7776666655555556666654 2111 11 22455666777888888888887777777666555 5777777888
Q ss_pred CCCCCchH---HHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHH--HhhhcCCCCcCCCCcccch
Q 012965 277 NDEEIPHG---FIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIV--TSFLVAPSNVKSGGISFSG 351 (452)
Q Consensus 277 ~~~~~~~~---~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 351 (452)
+..+.+.. .......+.+++|+++.+++.||+|.|+.+.+........+..+...+ ...... ....
T Consensus 310 ~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g---------~~~~ 380 (477)
T PF11700_consen 310 EVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFG---------LKSP 380 (477)
T ss_pred HhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccC---------cccH
Confidence 78888764 334455688999999999999999998433344444333232222221 111100 0011
Q ss_pred hhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh------hhHHHHHHHhccccCCchHHHHHHHHHHHH
Q 012965 352 SLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGMCSIFLLV 425 (452)
Q Consensus 352 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 425 (452)
+.+.+...+.|+..|..++..-++.+|+.|+++.+.-+|++++. .++++.+.+.+.++. ....+....++.++
T Consensus 381 ~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~-~r~g~~~l~~lf~~ 459 (477)
T PF11700_consen 381 WEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGS-QRYGFLFLLVLFLI 459 (477)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-chhHHHHHHHHHHH
Confidence 46677788899999999999999999999999999999998874 455555556555442 33334444444444
Q ss_pred HHHHH
Q 012965 426 ASVLQ 430 (452)
Q Consensus 426 ~~~~~ 430 (452)
...+.
T Consensus 460 gl~ll 464 (477)
T PF11700_consen 460 GLILL 464 (477)
T ss_pred HHHHH
Confidence 44333
No 103
>PRK09848 glucuronide transporter; Provisional
Probab=99.78 E-value=2.3e-16 Score=153.56 Aligned_cols=315 Identities=11% Similarity=0.025 Sum_probs=175.5
Q ss_pred hhhhHHHH-HhhcCCCcchhHHHHHHHHhhhhhcccccccccccc----CcchHH-HHHHHHHHHHH-HH-h----cCcc
Q 012965 56 QGPYVYYL-YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ----GRKRAC-VTYCLTYILSC-IT-K----HSPQ 123 (452)
Q Consensus 56 ~~p~l~~i-~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~----Grr~~l-~~~~~~~~i~~-l~-~----~~~~ 123 (452)
..++++.. .+.+|+++.++|.+.+...+...+..|+.|+++||. ||||.. ..+.+...+.. ++ . .+++
T Consensus 27 ~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (448)
T PRK09848 27 GALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHS 106 (448)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcc
Confidence 34544333 356799999999999999998999999999999986 777755 45555444432 22 1 1122
Q ss_pred --HHHHHHHHHHHHhHhhhhhhhhhhhhhhhc----ccccchhhHHHHHHHH-HHHHHHHHHHHHHHhhhhhhhcccCCC
Q 012965 124 --YKILMIGRILGGIATSLLFSAFESWLVAEH----NKRGFEQQWLSITFSK-AIFLGNGLVAILSGLFGNLLVDSFSLG 196 (452)
Q Consensus 124 --~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~----~~r~~~~~~~~~~~~~-~~~~g~~ig~~~~~~l~~~l~~~~~~~ 196 (452)
.+..+..-.+.+++.+...+...+ +..|. ++|.+..+......+. +...+..+++.+++..++. ...+
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~a-l~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~----~~~~ 181 (448)
T PRK09848 107 SKVVYAYLTYMGLGLCYSLVNIPYGS-LATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEE----MVSV 181 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHhcccHhh-hhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc----hhhh
Confidence 223444556677777777665544 33332 3444332222111111 1223333344333322211 0111
Q ss_pred cchhhHHHHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhcccccc
Q 012965 197 PVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSP 276 (452)
Q Consensus 197 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 276 (452)
|.....+.+++..+..+......||+.++++++ ++.++..+.++|||+++.......+....... .....|.|.+
T Consensus 182 ~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~~----~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~ 256 (448)
T PRK09848 182 YHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQ----PSLKISLQTLKRNRPLFMLCIGALCVLISTFA-VSASSLFYVR 256 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcEeccCCCccC----CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHH-HhhhheeeEe
Confidence 111112223333333333333445543322221 13344567788999988876666655554443 3556777777
Q ss_pred CCCCCch--HHHH-HHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhh
Q 012965 277 NDEEIPH--GFIF-ATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSL 353 (452)
Q Consensus 277 ~~~~~~~--~~~~-~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (452)
+..+.+. +... ....++.+++.++.+++.||+|+|+ .+..+..+..++.....+.... + .+.
T Consensus 257 ~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~--~~~~g~~~~~i~~~~~~~~~~~---------~----~~~ 321 (448)
T PRK09848 257 YVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKN--TFLIGALLGTCGYLLFFWVSVW---------S----LPV 321 (448)
T ss_pred eecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH--HHHHHHHHHHHHHHHHHHcCch---------h----HHH
Confidence 7666644 2222 2234567788899999999999877 3445544444443333221100 0 124
Q ss_pred HHHHHHHHHHHhhchhhHHHHHHhhcCCccc-------ccchhhhhhhh
Q 012965 354 QLLGFCTFEACVGIFWPSIMKMRSQYIPEEA-------RSTIMNFFRIP 395 (452)
Q Consensus 354 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~-------r~~~~g~~~~~ 395 (452)
......+.+++.+...+..+++.+|..|+++ +|...|+.++.
T Consensus 322 ~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~ 370 (448)
T PRK09848 322 ALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFT 370 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHH
Confidence 4556677888999888999999999887543 46667776664
No 104
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.77 E-value=3.8e-16 Score=151.48 Aligned_cols=313 Identities=13% Similarity=0.050 Sum_probs=181.0
Q ss_pred hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHH
Q 012965 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G 135 (452)
...++.+.+|+|-+ ....|+.....+...+..++.|+++|.+|||..++.+.++..+|. +++-++|...++.+..+.|
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~G 142 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYG 142 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHH
Confidence 56678899999876 455566666666677888899999999999999999999999987 7799999999999999999
Q ss_pred hHhhhhhhhhhhhhhhhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHH
Q 012965 136 IATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVI 214 (452)
Q Consensus 136 ~~~~~~~~~~~~~~i~e~-~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~ 214 (452)
+|.|...... . .++|. .+|.|..+. .... .........++.++..+..+. +||+.|++..+...+.++.
T Consensus 143 vgaG~~~~~~-~-~isEl~p~k~R~~~~--~~~~----~~~i~~~~~~~~ia~~~~~~~--~WRw~~~~~~i~~~i~~vl 212 (599)
T PF06609_consen 143 VGAGVQELAA-L-AISELVPNKWRGLGL--AIAS----IPFIITTWISPLIAQLFAAHS--GWRWIFYIFIIWSGIALVL 212 (599)
T ss_pred HhhHHHHHHH-H-HHHHhcccchhhhHh--HHHH----HHHHhhhcccHHHHHHhccCC--CcchHHHHHHHHHHHHHHH
Confidence 9988776432 3 57887 333332221 1111 122222234455555544434 4555666665554444333
Q ss_pred HH-hccccccCCC-CcchhHHHHHHHh-----------------------------------------------------
Q 012965 215 IL-SSWTENYGDP-SESKDLLTQFRGA----------------------------------------------------- 239 (452)
Q Consensus 215 ~~-~~~~~~~~~~-~~~~~~~~~~~~~----------------------------------------------------- 239 (452)
.. +..|+++++. .+..+.++..++-
T Consensus 213 ~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~ 292 (599)
T PF06609_consen 213 IFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEW 292 (599)
T ss_pred HHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhh
Confidence 22 2344332211 1111111111110
Q ss_pred ---------hHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCC------chHHHHHHHHHHHHHHhHHHHHH
Q 012965 240 ---------AVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI------PHGFIFATFMLASMLGSSLASRL 304 (452)
Q Consensus 240 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~------~~~~~~~~~~i~~~~~~~~~g~l 304 (452)
..+++|++|.+...+...+.....|.....+.|......++. ..+......+.+...+..+.+.+
T Consensus 293 ~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l 372 (599)
T PF06609_consen 293 FGAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLL 372 (599)
T ss_pred hccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHH
Confidence 013455545444433333333333333445555543332222 12455666778888888889999
Q ss_pred hccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCccc
Q 012965 305 MARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA 384 (452)
Q Consensus 305 ~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~ 384 (452)
..|++|-|. .+..+.....+.+.... .....+. . ..+...++.+++.|....+....++-..|++.
T Consensus 373 ~~~ir~~Kw-~li~~~~~~ta~~Gama-~~~~~n~--------~----~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ 438 (599)
T PF06609_consen 373 FSKIRHIKW-QLIFGSVLMTAFCGAMA-AVRPDNK--------N----AAIAFLVLAGFGIGGILVPAIVIAQLIVPDED 438 (599)
T ss_pred HHHccchhH-HHHHHHHHHHHHHHHHH-HccCCCc--------c----hHHHHHHHHHHhHHHHHHHHHHeeEeeeCchH
Confidence 988865552 22333333333222222 2222111 1 23455667777777777777777778889998
Q ss_pred ccchhhhhhh
Q 012965 385 RSTIMNFFRI 394 (452)
Q Consensus 385 r~~~~g~~~~ 394 (452)
-+++.|+...
T Consensus 439 ig~a~gL~~s 448 (599)
T PF06609_consen 439 IGTATGLTGS 448 (599)
T ss_pred HHHHHHHHHH
Confidence 8877665443
No 105
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.76 E-value=1.1e-15 Score=149.43 Aligned_cols=308 Identities=14% Similarity=0.131 Sum_probs=169.7
Q ss_pred hhhHHHHH-hhcCCCcchhHHHHHHHHhhhhhcccccccccc----ccCcc-hHHHHHHHHHHHHH-HHhcCc----c--
Q 012965 57 GPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLAD----KQGRK-RACVTYCLTYILSC-ITKHSP----Q-- 123 (452)
Q Consensus 57 ~p~l~~i~-~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~D----r~Grr-~~l~~~~~~~~i~~-l~~~~~----~-- 123 (452)
.++++..+ +.+|+++.++|.++.+.-+...+..|+.|.++| |+||| +.++.+.+..+++. ++...+ +
T Consensus 26 ~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~ 105 (473)
T PRK10429 26 YMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQ 105 (473)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHH
Confidence 55554555 567999999999999999999999999999999 66984 55556666667764 332222 1
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhhhhhhhc----ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc-ccCCCcc
Q 012965 124 YKILMIGRILGGIATSLLFSAFESWLVAEH----NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD-SFSLGPV 198 (452)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~----~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~-~~~~~~~ 198 (452)
+..+++.-.+.+++.........+ +..|. ++|.+..+.... ...+|..+++.+...+.....+ ...-+|+
T Consensus 106 ~~~~~~~~~l~~~~~t~~~ip~~a-l~~~lt~~~~eR~~l~~~~~~----~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~ 180 (473)
T PRK10429 106 YVFVCVTYILWGMTYTIMDIPFWS-LVPTLTLDKREREQLVPYPRF----FASLAGFVTAGFTLPFVNYVGGGDRGFGFQ 180 (473)
T ss_pred HHHHHHHHHHHHHHHHHHcchHHh-hhHHhCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhCCCchhhhHH
Confidence 334555556667766666555544 44443 445554443222 2222222222222222111111 0111344
Q ss_pred hhhHHHHHHHHHHHHHHHhccccccCCCC--cchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhcccccc
Q 012965 199 APFDAAACFLAIGMVIILSSWTENYGDPS--ESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSP 276 (452)
Q Consensus 199 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 276 (452)
....+.+++.++..+......+|++.+++ ++++.+.+.++..+.+++||+++.+.....+.....+. ...+.+.|.+
T Consensus 181 ~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~-~~~~~~y~~~ 259 (473)
T PRK10429 181 MFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEGSHLTLKDIVALIYKNDQLSCLLGMALAYNIASNI-INGFAIYYFT 259 (473)
T ss_pred HHHHHHHHHHHHHHHHHHcCceecCCccccccccccCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH-HhhheeeEEE
Confidence 44455555544444444434555432111 11111123455566677888877766555555443332 3445555554
Q ss_pred CCCCCch--HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhH
Q 012965 277 NDEEIPH--GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQ 354 (452)
Q Consensus 277 ~~~~~~~--~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (452)
...+... +.......++.+++.++.+++.||+|+|+. +..+..+..+............. .+ .+..
T Consensus 260 y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~--~~~~~~~~~~~~~~~~~~~~~~~------~~----~~~~ 327 (473)
T PRK10429 260 YVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRIL--WAGASIFPVLSCGVLLLMGLAAP------HN----ALLI 327 (473)
T ss_pred EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHH--HHHHHHHHHHHHHHHHHHhccCc------hh----HHHH
Confidence 4333222 344455567888999999999999998873 33333332322222221111100 00 1344
Q ss_pred HHHHHHHHHHhhchhhHHHHHHhhcCCc
Q 012965 355 LLGFCTFEACVGIFWPSIMKMRSQYIPE 382 (452)
Q Consensus 355 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 382 (452)
++...+.+++.+..++..+++.+|..+.
T Consensus 328 ~i~~~l~g~~~~~~~~~~~am~ad~id~ 355 (473)
T PRK10429 328 VIAGILLNIGTALFWVLQVIMVADTVDY 355 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 5566778888888888899999999763
No 106
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.76 E-value=1e-15 Score=148.81 Aligned_cols=332 Identities=14% Similarity=0.059 Sum_probs=189.5
Q ss_pred hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccC-----cchHHHHHHHHHH-HHH-HHhcCccHHHH-H
Q 012965 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQG-----RKRACVTYCLTYI-LSC-ITKHSPQYKIL-M 128 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~G-----rr~~l~~~~~~~~-i~~-l~~~~~~~~~l-~ 128 (452)
.+..+.+.+++|+|+++++...+...+...+ .+++|+++||++ ||+.++++.++.. +.. ..+..++.... .
T Consensus 46 ~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~ 124 (468)
T TIGR00788 46 LPLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAA 124 (468)
T ss_pred hhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHH
Confidence 4555566678999999998777777765555 556999999998 7777777776663 333 33444554444 4
Q ss_pred HHHHHHHhHhhhhhhhhhhhhhhhc--ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHH
Q 012965 129 IGRILGGIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAAC 206 (452)
Q Consensus 129 ~~r~l~G~~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~ 206 (452)
+.+++.+++.+...++..+ +..|. ++++...+.....+. . ..+|..+++.+++.+.+. ++|+..|.+.+.
T Consensus 125 ~~~~l~~~~~a~~dv~~da-~~~e~~~~~~~~~~~~~s~~~~-~----~~~G~~vg~~l~G~l~~~--~~~~~~f~~~a~ 196 (468)
T TIGR00788 125 AFIFLAALAKALYDVLVDS-LYSERIRESPSAGPSLVSWMWG-A----SATGGLISSLLGGPLLDK--TLTRILFLITAA 196 (468)
T ss_pred HHHHHHHHHHHHHHHhHHH-HHhhhhhcCCCcCCCeeeHHHH-H----HHHHHHHHHHHHHHHHHh--cCcchHHHHHHH
Confidence 4889999999999888877 76665 333332222222222 1 224555555556555543 456788888777
Q ss_pred HHHHHHHHHHhccccccC--CCCcchh--------------HHHHHHHhhHHhhcchhHHHHHHHHHh-hhchhhhhhhh
Q 012965 207 FLAIGMVIILSSWTENYG--DPSESKD--------------LLTQFRGAAVAIASDEKIALLGAIQSL-FEGSMYTFVFL 269 (452)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~--~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 269 (452)
+.++... .....+|+++ +++..++ ..++..++....+++|..+.......+ .... ......
T Consensus 197 l~ll~~~-~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~-~~~~~~ 274 (468)
T TIGR00788 197 LLLLQLF-VSNLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANL-PGASGS 274 (468)
T ss_pred HHHHHHH-HHHhcccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhc-CCCCce
Confidence 7666533 3335666531 1111000 011111233444666776664443333 1111 111111
Q ss_pred hccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCC
Q 012965 270 WTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGG 346 (452)
Q Consensus 270 ~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (452)
+. .+..+..|.++ |......+++.+++....+++.+|++.|+ .+..+..+..++...........+.. ...++
T Consensus 275 ~f-~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~--~l~~~~~l~~~~~~~~~~l~~~~~~~-~gi~~ 350 (468)
T TIGR00788 275 VF-CATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRL--LFGVTTLLYTLSSLFDLILVKRWNLA-FGISD 350 (468)
T ss_pred eE-EEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHH--HHHHHHHHHHHHHhCceeeeeccccc-cCCCC
Confidence 10 12223445444 67777788999999999999999998776 24444433333332211110000000 00000
Q ss_pred cccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhhh------hHHHHHHHhcc
Q 012965 347 ISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPL------NIFVCVVLYNV 407 (452)
Q Consensus 347 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~------~~~~~~~l~~~ 407 (452)
.+.......+.+++.+..+.....++++..|++.+++.+++.+... +..+++.+.+.
T Consensus 351 ----~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~ 413 (468)
T TIGR00788 351 ----EVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMET 413 (468)
T ss_pred ----eeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1234455667777888888778999999999999999988877642 23455555443
No 107
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.75 E-value=5.2e-22 Score=193.63 Aligned_cols=302 Identities=21% Similarity=0.226 Sum_probs=175.2
Q ss_pred hhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCc---cHHHHHHHHHHHHhHhhhhhhhhhhh
Q 012965 73 EIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSP---QYKILMIGRILGGIATSLLFSAFESW 148 (452)
Q Consensus 73 ~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~ 148 (452)
+.++..+..+++..+++++.|.++||+|||+.+..+..+..++. +.++++ |++.+.++|++.|++.|...+....
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~- 125 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPI- 125 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence 45677788888888888999999999999999999999999986 678898 9999999999999999999888845
Q ss_pred hhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccc-CCCcchhhHHHHHHHHHHHHHHHhcccccc-
Q 012965 149 LVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF-SLGPVAPFDAAACFLAIGMVIILSSWTENY- 223 (452)
Q Consensus 149 ~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~-~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~- 223 (452)
++.|. ++|++.....+. ... +|..++..++....+.. .+.||..+....+..++..+.. ...||.+
T Consensus 126 ~~~E~~~~~~R~~~~~~~~~----~~~----~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~-~~~pESP~ 196 (451)
T PF00083_consen 126 YISEIAPPKHRGFLSSLFQL----FWA----LGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLR-FFLPESPR 196 (451)
T ss_pred cccccccccccccccccccc----ccc----cccccccccccccccccccccccccccccccccccccccc-cccccccc
Confidence 88898 445544443332 223 33333333332222212 3568888877766665443333 3566642
Q ss_pred -----CCCCcchhHHHHH-----------------HH------hhHHhhcchh----HHHHHHHHHhhhchhhhhhhhhc
Q 012965 224 -----GDPSESKDLLTQF-----------------RG------AAVAIASDEK----IALLGAIQSLFEGSMYTFVFLWT 271 (452)
Q Consensus 224 -----~~~~~~~~~~~~~-----------------~~------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 271 (452)
++++++++..++. ++ ..++++++++ .........+.....+.....+.
T Consensus 197 wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~ 276 (451)
T PF00083_consen 197 WLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYS 276 (451)
T ss_pred eecccccccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 2222222211110 00 1223344322 22222222233333333345555
Q ss_pred cccccCCCCCchH-HHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHH--HHhhhcCCCCcCCCCcc
Q 012965 272 PALSPNDEEIPHG-FIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPI--VTSFLVAPSNVKSGGIS 348 (452)
Q Consensus 272 p~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 348 (452)
|.+.++ .+.+.. .......+...++.++...+.||+|||+. +..+.....++..... ....... +..+.
T Consensus 277 ~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~--~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 348 (451)
T PF00083_consen 277 PSIFEN-AGISNSFLATLILGLVNFLGTLLAIFLIDRFGRRKL--LIIGLLLMAICSLILGIIFFLGVSS-----SSWWS 348 (451)
T ss_pred cccccc-cccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc-----ccccc
Confidence 655543 333333 22233445667777788899999999973 4444444444433332 1111100 00001
Q ss_pred cchhhHHHHHHHHHHHhhc-hhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 349 FSGSLQLLGFCTFEACVGI-FWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 349 ~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
...+....+.....+. ..+..+.+..|.+|++.|+++.|+....
T Consensus 349 ---~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~ 393 (451)
T PF00083_consen 349 ---ILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAV 393 (451)
T ss_pred ---cccceeeeecccccccccccccccccccccccccccccccccccc
Confidence 1222333333333332 3477778999999999999999887764
No 108
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.75 E-value=4e-15 Score=143.00 Aligned_cols=329 Identities=16% Similarity=0.107 Sum_probs=181.3
Q ss_pred HHHhhcCCCcchhHHHHHHHHhhhhhcccccccccccc-CcchHHHHHHHHHHHHH-HHhcCc-cHHHHHHHHHHHHhHh
Q 012965 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCLTYILSC-ITKHSP-QYKILMIGRILGGIAT 138 (452)
Q Consensus 62 ~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~-Grr~~l~~~~~~~~i~~-l~~~~~-~~~~l~~~r~l~G~~~ 138 (452)
.+.+++|+++.+.+.+.........+..+++|+++||+ ||||++..+.++.+++. +++..+ +...+.++..+.+++.
T Consensus 35 yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~ 114 (493)
T PRK15462 35 YLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGY 114 (493)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhc
Confidence 33467899999999887777777778888999999999 99999999999998875 444433 2233444444555666
Q ss_pred hhhhhhhhhhhhhhc-ccc-cchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHH
Q 012965 139 SLLFSAFESWLVAEH-NKR-GFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIIL 216 (452)
Q Consensus 139 ~~~~~~~~~~~i~e~-~~r-~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~ 216 (452)
|...+...+ +++|. +++ .++.+. ++..+..++ +|..++|.+.+++.+. ++|+..|.+.++..++..+...
T Consensus 115 G~~~~~~~a-lv~elfp~~~~~R~sg----f~i~Y~~~n-lG~~iap~l~g~L~~~--~Gw~~~F~iaaigm~l~li~~~ 186 (493)
T PRK15462 115 GLFKSNVSC-LLGELYEPTDPRRDGG----FSLMYAAGN-VGSIIAPIACGYAQEE--YSWAMGFGLAAVGMIAGLVIFL 186 (493)
T ss_pred ccccccHHH-HHHHHCCCCCccccce----ehHHHHHHH-HHHHHHHHHHHHHHhh--hChHHHHHHHHHHHHHHHHHHH
Confidence 666565534 77775 221 122221 222233333 5667777777777654 4567778776544443333222
Q ss_pred h---ccccccC-CCCcchhHHHH---------------------HHHhh---------------------HHh-hcchhH
Q 012965 217 S---SWTENYG-DPSESKDLLTQ---------------------FRGAA---------------------VAI-ASDEKI 249 (452)
Q Consensus 217 ~---~~~~~~~-~~~~~~~~~~~---------------------~~~~~---------------------~~~-~~~~~~ 249 (452)
. ..++..+ ++++.++.... ..+.. +.. ..+|+-
T Consensus 187 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~er~r 266 (493)
T PRK15462 187 CGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKAENQKQRKE 266 (493)
T ss_pred HhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhh
Confidence 1 1122111 11111000000 00000 000 001221
Q ss_pred HHHHHHHHhhh---chhhhhhhhhccccccCC-------CCCchHHHHHHHHHHHHHHhHHHHHHhccCCCC-c----hh
Q 012965 250 ALLGAIQSLFE---GSMYTFVFLWTPALSPND-------EEIPHGFIFATFMLASMLGSSLASRLMARSPPR-V----ES 314 (452)
Q Consensus 250 ~~~~~~~~~~~---~~~~~~~~~~~p~~~~~~-------~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~-~----~~ 314 (452)
....+...+.. ...|.+..+-+..|.++. .+.++++.-+.+.+..++.+++.+++-.|..|| + ..
T Consensus 267 ~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~ 346 (493)
T PRK15462 267 LGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWG 346 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHH
Confidence 11111111111 111222222222232221 234567777888887777777777665554221 1 11
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhh
Q 012965 315 YMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (452)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (452)
-..++..+.++++..+.......+++ . ....++.+....+.+.+.-...|+..+.+++..|++.||..+|....
T Consensus 347 Kfa~g~~~~g~~f~~l~~~~~~~~~~----~--~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l 420 (493)
T PRK15462 347 KFALGLGLMSAGFCILTLSARWSAMY----G--HSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYML 420 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCC----C--CcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHH
Confidence 25566667777766554433321111 1 12334677888889999999999999999999999999999998754
Q ss_pred ---hhhHHHHHHH
Q 012965 395 ---PLNIFVCVVL 404 (452)
Q Consensus 395 ---~~~~~~~~~l 404 (452)
..+..+++.+
T Consensus 421 ~~~~~~~~~~g~~ 433 (493)
T PRK15462 421 LSGAIANYLAGVI 433 (493)
T ss_pred HHHHHHHHHHHHH
Confidence 2344444444
No 109
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.74 E-value=2.8e-15 Score=140.47 Aligned_cols=307 Identities=17% Similarity=0.173 Sum_probs=197.6
Q ss_pred hhhHHHHH-hhcCCCcchhHHHHHHHHhhhhhcccccccccc----ccCcchHH-HHHHHHHHHHH-HHhcCc------c
Q 012965 57 GPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLAD----KQGRKRAC-VTYCLTYILSC-ITKHSP------Q 123 (452)
Q Consensus 57 ~p~l~~i~-~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~D----r~Grr~~l-~~~~~~~~i~~-l~~~~~------~ 123 (452)
.-++...+ +..|+++...|.++.+.-+.-.+..|+.|.++| |+||||.. +.+.+..++.+ ++-.++ +
T Consensus 32 ~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k 111 (467)
T COG2211 32 VLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGK 111 (467)
T ss_pred HHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcc
Confidence 34444444 678999999999999999999999999999999 57876554 55557777654 444444 3
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhhhhhhh----cccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccc-CCCcc
Q 012965 124 YKILMIGRILGGIATSLLFSAFESWLVAE----HNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF-SLGPV 198 (452)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~e----~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~-~~~~~ 198 (452)
....++.-.+.+++.......-.+ +.+| .++|.+..++-+. ...+|..+...+.+++.....+.. .++|+
T Consensus 112 ~~ya~vtY~l~~l~YT~vniPy~a-l~~~iT~d~~ER~~l~s~R~~----~~~~g~~l~~~~~~plv~~~g~~~~~~g~~ 186 (467)
T COG2211 112 LIYALVTYMLLGLGYTLVNIPYGA-LGPEITQDPQERASLTSWRMV----FASLGGLLVAVLFPPLVKLFGGGDKALGYQ 186 (467)
T ss_pred hHHHHHHHHHHHHHHHheeCchhh-cchhhcCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhCCCcchhhHH
Confidence 445566677788877766555434 4333 3566665554333 344444444455545555444433 56777
Q ss_pred hhhHHHHHHHHHHHHHHHhccccccCCCCcchh-HHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccC
Q 012965 199 APFDAAACFLAIGMVIILSSWTENYGDPSESKD-LLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN 277 (452)
Q Consensus 199 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 277 (452)
....+.+++..+..++.++..+|+..+.++.++ .+.+.++.....++|+++...+....+.... +.........|.+.
T Consensus 187 ~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~-~~i~~s~~~yy~~y 265 (467)
T COG2211 187 GTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIA-FNIRGSIMVYYVTY 265 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCccccCcccccccHHHHHHHHHccchHHHHHHHHHHHHHH-HHHHhhhhheeEEE
Confidence 777777777777766666666665543332222 3344555666788898888877644443333 44445566666665
Q ss_pred CCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhH
Q 012965 278 DEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQ 354 (452)
Q Consensus 278 ~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (452)
..+.+. .........+.+.+.++..++.+|+|+|+ ....+..+..++.....+.... ..+..
T Consensus 266 ~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~--~~~~~~~~~~i~~~~~~f~~~~-------------~~~l~ 330 (467)
T COG2211 266 VLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKK--LFLIGLLLLAVGYLLLYFTPAG-------------SVVLI 330 (467)
T ss_pred EcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHH--HHHHHHHHHHHHHHHHHhhcCc-------------chHHH
Confidence 555544 34445555667777899999999999888 3555555555555554443311 01356
Q ss_pred HHHHHHHHHHhhchhhHHHHHHhhcCCccc
Q 012965 355 LLGFCTFEACVGIFWPSIMKMRSQYIPEEA 384 (452)
Q Consensus 355 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~ 384 (452)
++..++.+++.+..++..+++++|..+-++
T Consensus 331 ~~~~~i~~~g~~~~~~l~wam~~d~vDyge 360 (467)
T COG2211 331 VVALIIAGVGTGIANPLPWAMVADTVDYGE 360 (467)
T ss_pred HHHHHHHHHHhhccccccHHHhcchhhHHH
Confidence 667788899999999999999999976544
No 110
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.74 E-value=5.3e-16 Score=153.97 Aligned_cols=301 Identities=15% Similarity=0.064 Sum_probs=186.0
Q ss_pred HhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHHhHhhhhh
Q 012965 64 YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLF 142 (452)
Q Consensus 64 ~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G~~~~~~~ 142 (452)
.+.+..+........++.+++..+++.++|+++||+|||++++.++++..++. ..++++|++.+++.|++.|++.+...
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~ 189 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPL 189 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchh
Confidence 34556566666666666666666777789999999999999999999999965 77999999999999999999999998
Q ss_pred hhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHhcc
Q 012965 143 SAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSW 219 (452)
Q Consensus 143 ~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 219 (452)
..... ++.|. ++|+..... ......++.+++..++++.+ +||+.+++......+..+. +...
T Consensus 190 ~~~~~-~~~E~~~~~~R~~~~~~---------~~~~~~~~~~~~~~~a~~~~----~Wr~~~~~~~~~~~~~~~~-~~l~ 254 (521)
T KOG0255|consen 190 TVGFG-LVAEIVSPKQRGLALTL---------GGFFFVGGLMLPAGAAYITR----DWRWLFWIISIPSGLFLLL-WFLP 254 (521)
T ss_pred HHhHh-hheeecCcchhhHHHHH---------HHHHHHHHHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHH-HHcc
Confidence 88855 78888 334443221 11233455666666666664 6677777766666654444 2223
Q ss_pred cccc------CCCCcchhHHHHHH--------------H----------------hhHHhhcchhHHHHHHHHHhhhchh
Q 012965 220 TENY------GDPSESKDLLTQFR--------------G----------------AAVAIASDEKIALLGAIQSLFEGSM 263 (452)
Q Consensus 220 ~~~~------~~~~~~~~~~~~~~--------------~----------------~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (452)
||.+ ++.+++.+..++.. . ...+.++.++.........+.. ..
T Consensus 255 ~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~-~~ 333 (521)
T KOG0255|consen 255 PESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIW-FV 333 (521)
T ss_pred CcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHH-HH
Confidence 3422 22222111111110 0 0112233333222222222111 11
Q ss_pred hhhhhhhccccccCCCCCchHHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcC
Q 012965 264 YTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVK 343 (452)
Q Consensus 264 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (452)
+. ..++.-.+.....+.+........+..........+...||.|||. .......+..++++...+......
T Consensus 334 ~~-~~y~gl~~~~~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~--~~~~~~~~~~~~~~~~~~~~~~~~----- 405 (521)
T KOG0255|consen 334 FS-LVYYGLSLNVSGLGGNIYLNFTLSGLVELPAYFRNGLLLPEFGRRP--PLFLSLFLAGIGLLLFGWLPDDLG----- 405 (521)
T ss_pred Hh-HHHHhhhhhhhhcCchHHHHHHHHHHHHhhHHHHHHHHHHHhCcHH--HHHHHHHHHHHHHHHHHHhhccch-----
Confidence 11 1223333334456666666666666678888888899999998887 355555555666665554443311
Q ss_pred CCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 344 SGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
. +...+...+..++.+..+...+.+..|.+|+..|..+.+..+..
T Consensus 406 --~-----~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~ 450 (521)
T KOG0255|consen 406 --G-----WLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAA 450 (521)
T ss_pred --h-----HHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Confidence 0 13344445555566666666799999999999999998887764
No 111
>PTZ00207 hypothetical protein; Provisional
Probab=99.73 E-value=9.8e-16 Score=149.59 Aligned_cols=105 Identities=12% Similarity=0.057 Sum_probs=83.7
Q ss_pred hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcC------ccHHHHHH
Q 012965 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS------PQYKILMI 129 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~------~~~~~l~~ 129 (452)
+.+.+++.+++|+|.++++++.+.+...+ ...++.|++.||+|||+++.++.+++.++. +++++ ++++.+.+
T Consensus 47 sv~s~~L~~~lgls~~~l~~i~svg~~~g-~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l 125 (591)
T PTZ00207 47 NLISGAMQARYNLTQRDLSTITTVGIAVG-YFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSV 125 (591)
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHH
Confidence 55567888999999999998887755543 456678999999999999999999999986 55665 68999999
Q ss_pred HHHHHHhHhhhhhhhhhhhhhhhc--ccccchhhHH
Q 012965 130 GRILGGIATSLLFSAFESWLVAEH--NKRGFEQQWL 163 (452)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~e~--~~r~~~~~~~ 163 (452)
.|++.|++.+...+.... .+.++ ++|+...+..
T Consensus 126 ~r~l~G~G~~~~~~~~~~-~i~~~Fp~~RG~a~Gi~ 160 (591)
T PTZ00207 126 YNGLMTLGCMLFDLGAVV-TVLSVFPSNRGAVVAIM 160 (591)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHhChhhhHHHHHHH
Confidence 999999999888777655 55666 5566655533
No 112
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.68 E-value=2.7e-14 Score=130.43 Aligned_cols=340 Identities=16% Similarity=0.173 Sum_probs=197.5
Q ss_pred chhhHHHHHHHHHHHHhhhhh----hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHH
Q 012965 36 NSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLT 111 (452)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~----~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~ 111 (452)
-+.||.+++.+.+....++++ +|.-.+..+-|| +....-+...+...++...+.++-|+.||+|-|...+++..+
T Consensus 40 y~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~l 118 (480)
T KOG2563|consen 40 YPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVL 118 (480)
T ss_pred chhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHH
Confidence 345777888888888888777 666555566778 444444665666666778888899999999999999999999
Q ss_pred HHHHHHH---hcC----ccHH--HHHHHHHHHHhHhhhhhhhhhhhhhhhc----ccccchhhHHHHHHHHHHHHHHHHH
Q 012965 112 YILSCIT---KHS----PQYK--ILMIGRILGGIATSLLFSAFESWLVAEH----NKRGFEQQWLSITFSKAIFLGNGLV 178 (452)
Q Consensus 112 ~~i~~l~---~~~----~~~~--~l~~~r~l~G~~~~~~~~~~~~~~i~e~----~~r~~~~~~~~~~~~~~~~~g~~ig 178 (452)
..++... +.. +.++ ....+..+.+.+.-...... + -+++. ++|..... ....+..+|.++|
T Consensus 119 n~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lP-s-kiA~~WF~~~qra~A~~----~~v~~n~LGvavg 192 (480)
T KOG2563|consen 119 NGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLP-S-KIAAVWFPPDQRAIATV----LGVMGNPLGVAVG 192 (480)
T ss_pred HHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccc-c-HHHHhhCCcchhhhhhh----HHHhcchHHHHHH
Confidence 9997532 222 2344 55667777776665554442 2 33433 33333222 2222333445555
Q ss_pred HHHHHhhhhhhhcccCCCcch--hhHHHHHHHHHHHHHHHhccccccCCCCcchhHHH---HHHHhhHHhhcchhHHHHH
Q 012965 179 AILSGLFGNLLVDSFSLGPVA--PFDAAACFLAIGMVIILSSWTENYGDPSESKDLLT---QFRGAAVAIASDEKIALLG 253 (452)
Q Consensus 179 ~~~~~~l~~~l~~~~~~~~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 253 (452)
.++.|++...--+..+..|.. .|.....+..+.+.+.....+++++.++......+ +..+..+..++++++..+.
T Consensus 193 ~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~~~~f~~si~~~~~n~~F~il~ 272 (480)
T KOG2563|consen 193 FLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQDASFPKSIKSCFKNRQFIILA 272 (480)
T ss_pred hhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhhcCcHHHHHHHHHcCccHHHHH
Confidence 555554443321112333432 34444444444333333333333332222222222 2566777889999999888
Q ss_pred HHHHhhhchhhhhhhhhcc-ccccCCCC-CchHHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHH
Q 012965 254 AIQSLFEGSMYTFVFLWTP-ALSPNDEE-IPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPI 331 (452)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~p-~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~ 331 (452)
+......+.++.. .+.+. ..-..++. ...|.......+++++++.+.|.+.||.++-++ ..........+....+.
T Consensus 273 ~~ygi~~g~F~~l-~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~-~~~v~~~~~~v~~~~l~ 350 (480)
T KOG2563|consen 273 ICYGIGLGLFNSL-STLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKL-TTLVLYLFALVGTLMLL 350 (480)
T ss_pred HHHhhhHHHHHHH-HHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHH-HHHHHHHHHHHHHHHHH
Confidence 8877766666653 33332 22223332 345888888889999999999999999854442 22222222222212211
Q ss_pred HHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 332 VTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
....... . .+.......++|++.....|+...+..|..=|..-++..|+.++.
T Consensus 351 ~~t~~~~------~-----~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~ 403 (480)
T KOG2563|consen 351 TCTLFLG------D-----SVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLS 403 (480)
T ss_pred HhhccCC------c-----eEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEee
Confidence 1111101 1 134555666777777778899898989985554555666666654
No 113
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.68 E-value=9e-15 Score=132.82 Aligned_cols=338 Identities=13% Similarity=0.131 Sum_probs=199.9
Q ss_pred HHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHH-HH-HHhcCcc--HH-HHHHHHHHHHhHhhhhhhhhhhhh
Q 012965 75 GQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL-SC-ITKHSPQ--YK-ILMIGRILGGIATSLLFSAFESWL 149 (452)
Q Consensus 75 g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i-~~-l~~~~~~--~~-~l~~~r~l~G~~~~~~~~~~~~~~ 149 (452)
|...++..+...+.+|+.|.++|+.|+||..........+ +. ...++++ ++ ..++.-.+..++.......-.+ +
T Consensus 61 gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds-~ 139 (438)
T COG2270 61 GYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDS-M 139 (438)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhh-H
Confidence 4555556666668889999999999988777766665554 33 4455443 44 4455566677766666555545 6
Q ss_pred hhhcccccchhhHHHHHHHHHHHHHHHHHHHHH--Hhhhh----hh------hcccCCCcchhhHHHHHHHHHHHHHHHh
Q 012965 150 VAEHNKRGFEQQWLSITFSKAIFLGNGLVAILS--GLFGN----LL------VDSFSLGPVAPFDAAACFLAIGMVIILS 217 (452)
Q Consensus 150 i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~--~~l~~----~l------~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 217 (452)
+.+..++.+....-+..+..+.. |..+-.++. ....+ .. -+..+-.-|..+.+.++-.++..+.+..
T Consensus 140 L~~~~~k~~~~riS~lg~~~gyl-gs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~ 218 (438)
T COG2270 140 LPRLTTKDNMGRISGLGWALGYL-GSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMIL 218 (438)
T ss_pred hhhhcCccccCcccccccccccc-cchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHh
Confidence 55543332222111111221111 111111110 00000 00 0012334466666666666655555444
Q ss_pred ccccccCCC-Cc---chhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCchH---HHHHHH
Q 012965 218 SWTENYGDP-SE---SKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHG---FIFATF 290 (452)
Q Consensus 218 ~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~---~~~~~~ 290 (452)
..++.++.. ++ -.+..++..++.++.++++....+.+...+..-+..+ .......|..+.+|.+.. ......
T Consensus 219 ~v~~~~~~~~~~~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~t-il~~~~~fg~~~~gls~~~lll~g~~~ 297 (438)
T COG2270 219 NVHDAEKISSPPPTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNT-ILAMGGVFGAADLGLSSTELLLIGIAL 297 (438)
T ss_pred cccccccccccchHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHH-HHHHHHHHHHHHcCccHHHHHHHHHHH
Confidence 444433221 11 1234456667888888888888887777777766555 466677777777887663 344556
Q ss_pred HHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhh
Q 012965 291 MLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWP 370 (452)
Q Consensus 291 ~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 370 (452)
.+..++|+++.|++.||+|.|+ ++..+.++....++...+.... ....+..++.|...|..+.
T Consensus 298 ~vvA~lg~ii~g~Ld~rfg~k~--vl~~~lvi~~~~~~~~~~~~~~---------------~~f~i~gll~g~s~G~~qA 360 (438)
T COG2270 298 SVVAALGAIIAGFLDERFGSKP--VLMIGLVILSIAALYLIFLEGE---------------LDFWILGLLVGTSLGGAQA 360 (438)
T ss_pred HHHHHHHHHHHHHHHHHhCCce--eehHHHHHHHHHHHHHHHcccc---------------HHHHHHHHHHHHhcchHHH
Confidence 6889999999999999999887 3556665555555554443332 2556667888999999999
Q ss_pred HHHHHHhhcCCcccccchhhhhhhh------hhHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHhh
Q 012965 371 SIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGMCSIFLLVASVLQRRL 433 (452)
Q Consensus 371 ~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (452)
..-++..+.+|+++-++.+|++++. .++..-+...+.++. ....+....++..+......+.
T Consensus 361 ~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~-~r~g~~~i~vll~iGl~~L~~v 428 (438)
T COG2270 361 SSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGS-SRAGVLSIIVLLLIGLLLLLRV 428 (438)
T ss_pred HHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHhhHhhEEee
Confidence 9999999999999999999999885 333333444444443 3333333333444444444333
No 114
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.66 E-value=1.4e-14 Score=133.00 Aligned_cols=234 Identities=12% Similarity=0.064 Sum_probs=144.2
Q ss_pred cCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccc---
Q 012965 120 HSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF--- 193 (452)
Q Consensus 120 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~--- 193 (452)
...+++.++++-++.|.|.+...+...+ ++++. +++.++.+..+.. +++|..++|.+++.+....
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~-~v~~~~~~~~~~~~l~~~~~~--------~~~G~~~gP~i~~~~i~~~~~~ 76 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANP-YVSILGPIETAASRLALTQAF--------NKLGTTVAPLFGGSLILSGAGD 76 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHH-HHHHHCCcchHHHHHHHHHHH--------hhhHHHHHHHHHHHHHhcCCcc
Confidence 4578999999999999999999999978 87655 4455555544444 3355555555555544211
Q ss_pred -----------CCCcchhhHHHHHHHHHHH-HHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhc
Q 012965 194 -----------SLGPVAPFDAAACFLAIGM-VIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEG 261 (452)
Q Consensus 194 -----------~~~~~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (452)
.++|+.+|.+.+.+..+.. .+.....||.+++++++.+..++ .+.+..+++|+.+...+..++..+
T Consensus 77 ~~~~~~~~~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~f~yvg 154 (310)
T TIGR01272 77 LSMQVATANAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADVARVSSGDT--TQKTSAFQFTHLVLGALGIFVYVG 154 (310)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcccccccccccc--cchhhHHhhHHHHHHHHHHHHHHH
Confidence 1467888886554444333 33333455543332221111111 112235666776665444444443
Q ss_pred hhhhhhhhhccccccCC--CCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhh
Q 012965 262 SMYTFVFLWTPALSPND--EEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFL 336 (452)
Q Consensus 262 ~~~~~~~~~~p~~~~~~--~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (452)
.... ...|.+.|+++. .+.++ +...+....+.++|+++.+++.||+++|+ .+..+..+..+...+... ...
T Consensus 155 ~e~~-~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~--~l~~~~~l~~~~~~l~~~-~~~ 230 (310)
T TIGR01272 155 AEVS-AGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGR--YLAFNAFLAVLLSIGAAL-THG 230 (310)
T ss_pred HHHH-HHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH--HHHHHHHHHHHHHHHHHH-cCC
Confidence 4333 588999998643 45544 56777888899999999999999999777 244443333333322211 111
Q ss_pred cCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcc
Q 012965 337 VAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEE 383 (452)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~ 383 (452)
........+.+++.+..+|...+...+..|++
T Consensus 231 ---------------~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~ 262 (310)
T TIGR01272 231 ---------------YVAMWFVLALGLFNSIMFPTIFSLALNALGRH 262 (310)
T ss_pred ---------------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 12344666888999999999999999988875
No 115
>PRK11462 putative transporter; Provisional
Probab=99.66 E-value=5.4e-13 Score=129.76 Aligned_cols=293 Identities=15% Similarity=0.135 Sum_probs=157.2
Q ss_pred HhhcCCCcchhHHHHHHHHhhhhhccccccccccc----cCcchHHH-HHHHHHHHHH-HHhcCcc------HHHHHHHH
Q 012965 64 YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK----QGRKRACV-TYCLTYILSC-ITKHSPQ------YKILMIGR 131 (452)
Q Consensus 64 ~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr----~Grr~~l~-~~~~~~~i~~-l~~~~~~------~~~l~~~r 131 (452)
.+..|+++..+|.++.+.-+...+..|+.|.++|| +||||..+ .+.+..+++. ++-..++ ...+.+.-
T Consensus 37 t~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~ 116 (460)
T PRK11462 37 TDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITY 116 (460)
T ss_pred HHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHH
Confidence 36789999999999999999999999999999995 79876665 4556667665 3333332 33455555
Q ss_pred HHHHhHhhhhhhhhhhhhhhhc----ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc-ccCCCcchhhHHHHH
Q 012965 132 ILGGIATSLLFSAFESWLVAEH----NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD-SFSLGPVAPFDAAAC 206 (452)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~e~----~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~-~~~~~~~~~f~~~~~ 206 (452)
.+..++.......-.+ +..|. ++|.+..++ ...+..+|..+++.+..++.....+ ....+|+....+.++
T Consensus 117 ~~~~~~~t~~~ipy~a-l~~~lt~d~~eRt~l~s~----r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~i 191 (460)
T PRK11462 117 TLLTLLYTVVNIPYCA-LGGVITNDPTQRISLQSW----RFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSV 191 (460)
T ss_pred HHHHHHHHHHhccHHH-HHHHhcCCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHH
Confidence 5666666666555434 44443 555554443 3333444444444444333322211 111345554555555
Q ss_pred HHHHHHHHHHhccccccCCCCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhch--hhhhhhhhccccccCCCCCchH
Q 012965 207 FLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGS--MYTFVFLWTPALSPNDEEIPHG 284 (452)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~~~~~~~ 284 (452)
+..++..+.....+|+.++++++. +.++..+...+|+.++.+.....+.... .......|...|..+. ....+
T Consensus 192 i~~i~~~i~~~~~kE~~~~~~~~~----~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~ 266 (460)
T PRK11462 192 VAFMMLAFCFFTTKERVEAPPTTT----SMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFV 266 (460)
T ss_pred HHHHHHHHHHhcceeccCCCccCC----CHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHH
Confidence 554444444433454432222111 2345566778887776654333222221 1111223333333211 11123
Q ss_pred HHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHH
Q 012965 285 FIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEAC 364 (452)
Q Consensus 285 ~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 364 (452)
.......+..+++.+++++++||+++|+. .........+......+.... + .+...+..++.+++
T Consensus 267 ~~l~~~~i~~iig~~l~~~l~~r~gkk~~--~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~~l~g~~ 331 (460)
T PRK11462 267 AFLTTYCVGNLIGSALAKPLTDWKCKVTI--FWWTNALLAVISLAMFFVPMQ---------A----SITMFVFIFVIGVL 331 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhChHHH--HHHHHHHHHHHHHHHHHhchh---------H----HHHHHHHHHHHHHH
Confidence 45556667888899999999999998762 222222222222221111111 0 01223344556777
Q ss_pred hhchhhHHHHHHhhcCC
Q 012965 365 VGIFWPSIMKMRSQYIP 381 (452)
Q Consensus 365 ~~~~~~~~~~~~~~~~p 381 (452)
.+...+..+++..|..+
T Consensus 332 ~~~~~~l~~~m~ad~~d 348 (460)
T PRK11462 332 HQLVTPIQWVMMSDTVD 348 (460)
T ss_pred HHHHHHHHHHHHHHhHh
Confidence 66666777888888766
No 116
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.64 E-value=6.3e-15 Score=125.74 Aligned_cols=315 Identities=14% Similarity=0.119 Sum_probs=177.7
Q ss_pred HhhcCCCcchhHHHHHHHHhhhhhccccccccccc-cCcchHHHHHHHHHHHH-H---HHhcCccHHHHHHHHHHHHhHh
Q 012965 64 YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCLTYILS-C---ITKHSPQYKILMIGRILGGIAT 138 (452)
Q Consensus 64 ~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr-~Grr~~l~~~~~~~~i~-~---l~~~~~~~~~l~~~r~l~G~~~ 138 (452)
..|.+++.++..++++.......+...++|++.|| +|-|..-++-+....++ . ..+..+.+|.+..+|++.|+|.
T Consensus 71 k~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGg 150 (459)
T KOG4686|consen 71 KLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGG 150 (459)
T ss_pred hcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCc
Confidence 35677778888888888777777888889999996 67666544444444444 2 2256899999999999999986
Q ss_pred hhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccC-C-----CcchhhHHH-HHHH
Q 012965 139 SLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS-L-----GPVAPFDAA-ACFL 208 (452)
Q Consensus 139 ~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~-~-----~~~~~f~~~-~~~~ 208 (452)
-..-.+- ..+..-+ ++-+...+.+.+..- +|..+-..+.+.+........+ - |-...+-.- ....
T Consensus 151 ESlAVaQ-N~yav~wFKGKELn~vfGlqlSvAR----~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~s 225 (459)
T KOG4686|consen 151 ESLAVAQ-NKYAVYWFKGKELNFVFGLQLSVAR----LGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQS 225 (459)
T ss_pred hhhhhhh-cceeEEEecCccccchhhHHHHHHH----hhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH
Confidence 6664444 4364444 344444444333322 2222222223333222221111 0 100111110 0111
Q ss_pred HHHHHHHHhccccccCCCCcchhHHHHHHH------hhHHh-hcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCC
Q 012965 209 AIGMVIILSSWTENYGDPSESKDLLTQFRG------AAVAI-ASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI 281 (452)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 281 (452)
+++.... .+.+++ +++..++... ...+. --.|++|.+.....+.....+.+ ....|.++++.+|.
T Consensus 226 lical~l--g~~D~r-----Aerilh~e~g~~Ge~pkLtdv~~f~ppfw~~~iicv~yyva~fPF-i~lg~~fF~~rfGl 297 (459)
T KOG4686|consen 226 LICALSL--GLSDDR-----AERILHLEEGFLGEEPKLTDVNTFYPPFWVLVIICVLYYVAWFPF-ITLGPMFFQKRFGL 297 (459)
T ss_pred HHHHHHh--hhhhhH-----HHHHHhhhcCcccCCcccccccccCccHHHHHHHHHHHHHHHHHH-hhhhHHHHHHhhCC
Confidence 1111111 111111 1111000000 00011 11367888777776666665553 66778888888888
Q ss_pred ch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHH
Q 012965 282 PH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGF 358 (452)
Q Consensus 282 ~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (452)
++ +.+.+..-..+.+.+++.|.++||.|++-. .....++..+..-...++... --..++
T Consensus 298 S~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~--wv~~a~~~tl~~H~~l~Ft~l----------------sPy~~m 359 (459)
T KOG4686|consen 298 SAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLW--WVASACILTLLGHSGLFFTFL----------------SPYTSM 359 (459)
T ss_pred ChhhccchhhhhhhhhhhhhhhHHHhHhhhcceeh--hHHHHHHHHHHHhhhHHhhhc----------------cHHHHH
Confidence 76 445555556677788899999999998762 333333333222222222222 236778
Q ss_pred HHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhhhhH------HHHHHHhcccc
Q 012965 359 CTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNI------FVCVVLYNVDA 409 (452)
Q Consensus 359 ~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~------~~~~~l~~~~~ 409 (452)
.+.|..+.......|..++..+|+++-|+++|+.+...|. ++.+.+.+..+
T Consensus 360 ~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g 416 (459)
T KOG4686|consen 360 TFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDG 416 (459)
T ss_pred HHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCC
Confidence 8888888877777899999999999999999888765433 44555555544
No 117
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.57 E-value=1.5e-12 Score=121.19 Aligned_cols=328 Identities=18% Similarity=0.186 Sum_probs=196.3
Q ss_pred hhhhhhhhHHHHHhhcC----CCcchhHHHHHHHHhhhhhcccccccccccc-CcchHHHHHHHHHHHHH-HHhcC--cc
Q 012965 52 GDWLQGPYVYYLYSTYG----FGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCLTYILSC-ITKHS--PQ 123 (452)
Q Consensus 52 ~~~~~~p~l~~i~~~~g----~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~-Grr~~l~~~~~~~~i~~-l~~~~--~~ 123 (452)
-++++.++..+++.+++ +|.++...+++.....-.+...++|+++||+ |+|+++.++.++..+|- +.+.+ .+
T Consensus 37 yYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~ 116 (498)
T COG3104 37 YYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSG 116 (498)
T ss_pred hhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhcccccc
Confidence 45566777777777766 8888887766666555666777899999995 99999999999999995 45655 47
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhhhhhhhc----ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcch
Q 012965 124 YKILMIGRILGGIATSLLFSAFESWLVAEH----NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVA 199 (452)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~----~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~ 199 (452)
...++++-.+.++|.|..-+...+ ++.|. ++| +.+- ++. ...+..+|..++|.+.+++.++.+ |..
T Consensus 117 ~~gl~i~L~~I~iG~Gl~K~NiS~-llg~ly~~~Dpr--rD~g----Ft~-fY~~iNiGsl~~p~i~~~~~~~~g--~~~ 186 (498)
T COG3104 117 PGGLYIGLALIIVGTGLFKPNISS-LLGELYPKDDPR--RDGG----FTL-FYMGINIGSLIAPIITGLLAINYG--WHV 186 (498)
T ss_pred ccHHHHHHHHHHhccccccccHHH-HHHHhcCCCCcc--cCCC----ccE-EEEEeehHHHHHHHHHHHHHHhhC--HHH
Confidence 888999999999999999988866 77776 333 2221 221 122344666777777777776555 456
Q ss_pred hhHHHHHHHHHHHHHHHhc---cccccCCCCcchhHHHHH---------------------HHhh---------------
Q 012965 200 PFDAAACFLAIGMVIILSS---WTENYGDPSESKDLLTQF---------------------RGAA--------------- 240 (452)
Q Consensus 200 ~f~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~---------------------~~~~--------------- 240 (452)
.|...++-..+.++..+.. ...+..++++.....+.. .+..
T Consensus 187 gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~ 266 (498)
T COG3104 187 GFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIY 266 (498)
T ss_pred HHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777766666555444321 111111111110000000 0000
Q ss_pred -HHh------hcchhHHHHHHHHHhhhchhhh---hh----hhhccccccCC---CCCchHHHHHHHHHHHHHHhHHHHH
Q 012965 241 -VAI------ASDEKIALLGAIQSLFEGSMYT---FV----FLWTPALSPND---EEIPHGFIFATFMLASMLGSSLASR 303 (452)
Q Consensus 241 -~~~------~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~p~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~g~ 303 (452)
.+. ..+|+-....+..++....++. +. ..+.....+.+ .+.++++.-+.+.+.-++..++..+
T Consensus 267 ~~~~~~~~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~ 346 (498)
T COG3104 267 FAEAFRSPKVFDERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAA 346 (498)
T ss_pred HHHHhccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHH
Confidence 000 0222222222222222222121 11 12222222222 3345678888888888888877777
Q ss_pred HhccCCCCc---h--hHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhh
Q 012965 304 LMARSPPRV---E--SYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQ 378 (452)
Q Consensus 304 l~dr~g~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 378 (452)
+..|.++++ . .-..++..+++.+++.+......... ++-..+.++.+..+++.+++.-+..|...+++.+
T Consensus 347 l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~-----~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~ 421 (498)
T COG3104 347 LWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGG-----PSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTK 421 (498)
T ss_pred HHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcC-----CCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 777744331 1 12445556666666655544222111 1123334678888999999999999999999999
Q ss_pred cCCcccccchhhhhhh
Q 012965 379 YIPEEARSTIMNFFRI 394 (452)
Q Consensus 379 ~~p~~~r~~~~g~~~~ 394 (452)
..|++..+..++..-.
T Consensus 422 laP~~~~s~~ma~wfL 437 (498)
T COG3104 422 LAPPALKSFIMAMWFL 437 (498)
T ss_pred hChHHHHHHHHHHHHH
Confidence 9999988888876544
No 118
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.53 E-value=2.8e-12 Score=120.66 Aligned_cols=186 Identities=19% Similarity=0.129 Sum_probs=121.0
Q ss_pred ccchhhHHHHHHHHHHHHhhhhh----hhhHHHHHh--hcCCCcchhHHHHHHHHhhhhhccccccccccccCc-chHHH
Q 012965 34 AFNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYS--TYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGR-KRACV 106 (452)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~----~p~l~~i~~--~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Gr-r~~l~ 106 (452)
+.++.+|+.+.+..+..+....+ .|-.++-.+ |.+.+.+..|++.+..-++..+.++..|.+..|.++ |+.++
T Consensus 27 ~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli 106 (488)
T KOG2325|consen 27 DERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLI 106 (488)
T ss_pred cccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHH
Confidence 33455666555555555444444 333333333 577888888999998888888999999999999986 88888
Q ss_pred HHHHHHHHHH-H--H-hc-Cc-cHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHH
Q 012965 107 TYCLTYILSC-I--T-KH-SP-QYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGL 177 (452)
Q Consensus 107 ~~~~~~~i~~-l--~-~~-~~-~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~i 177 (452)
.+.++..++. + + .. .+ .-+.++++|++.|+|.+..... .+ |+++. ++|.+..+. .+.+..+|..+
T Consensus 107 ~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~l-R~-Y~a~~s~~~dR~rA~a~----~~~~~vlg~il 180 (488)
T KOG2325|consen 107 VSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVL-RA-YIADASTVEDRPRAFAA----TSGGFVLGIIL 180 (488)
T ss_pred HHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHH-HH-HHHhccCccchHHHHHH----hhhHHHHHHHH
Confidence 8988888874 2 2 23 33 5778999999999998887444 35 77775 555555553 33345566666
Q ss_pred HHHHHHhhhhhhhcccC----CC---cchhhHHHHHHHHHHHHHHHhccccccCC
Q 012965 178 VAILSGLFGNLLVDSFS----LG---PVAPFDAAACFLAIGMVIILSSWTENYGD 225 (452)
Q Consensus 178 g~~~~~~l~~~l~~~~~----~~---~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 225 (452)
|+.+.+.+++...+-.. .. +..+-++.+++.++..+++....+|.+.+
T Consensus 181 Gp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~ 235 (488)
T KOG2325|consen 181 GPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRG 235 (488)
T ss_pred hHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccC
Confidence 66666666554332111 11 23455677777776666666666665443
No 119
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.48 E-value=2.5e-10 Score=104.49 Aligned_cols=349 Identities=16% Similarity=0.132 Sum_probs=199.1
Q ss_pred HHhhcCCCcchhHHHHHHHHhhhhhccccccccccccC-----cchHHHHHHHHH-HHHH-HHh-----cCc-------c
Q 012965 63 LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQG-----RKRACVTYCLTY-ILSC-ITK-----HSP-------Q 123 (452)
Q Consensus 63 i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~G-----rr~~l~~~~~~~-~i~~-l~~-----~~~-------~ 123 (452)
+..|++++..-.+.+....+.. ....+.+|+.+|+.+ ||..++....+. ..+. +.. ++. +
T Consensus 6 MIvEL~vpA~lv~~lval~~~~-ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLV-APLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHH-HHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 3468999988888888888773 345778999999999 888777654433 3332 211 222 2
Q ss_pred HH----HHHHHHHHHHhHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCC-Ccc
Q 012965 124 YK----ILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSL-GPV 198 (452)
Q Consensus 124 ~~----~l~~~r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~-~~~ 198 (452)
.+ ...+.-.+.|+|.+.......+ +++|..+++++.+.....+. ... +|.+++....+.+.+.++- +-.
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lA-Ll~D~~~e~~R~~~v~ivw~-Mli----~G~iv~ai~~g~lL~~~s~~rL~ 158 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLA-LLADLAPEERRPRVVAIVWV-MLI----VGIIVSAIVFGRLLDPFSPERLI 158 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHH-HHHhcCCHhhhhhhHHHHHH-HHH----HHHHHHHHHHHHHccccCHHHHH
Confidence 22 3345566777777777666645 67776333333333333333 233 3444444555544432221 111
Q ss_pred hhhHHHHHHHHHHHHHHHhccccccCC--CCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhcccccc
Q 012965 199 APFDAAACFLAIGMVIILSSWTENYGD--PSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSP 276 (452)
Q Consensus 199 ~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 276 (452)
..+...+++.....++.... .|++.+ .++.++...+.++.++++.++|+...+.....+.....+.. ...+-.|-.
T Consensus 159 ~v~~~~a~i~~~l~~ia~wg-~E~r~~~~~~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~Q-D~iLEPygg 236 (403)
T PF03209_consen 159 QVIQGVALIALLLNLIALWG-QEPRRSRRAAAAERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQ-DVILEPYGG 236 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHh-cccCCcccccCCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhh-HHHcCCchh
Confidence 12222222222222222212 222211 11122233345566777778888777766655555554442 445555777
Q ss_pred CCCCCchH---HHHHHHHHHHHHHhHHHHHHhcc-CCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchh
Q 012965 277 NDEEIPHG---FIFATFMLASMLGSSLASRLMAR-SPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGS 352 (452)
Q Consensus 277 ~~~~~~~~---~~~~~~~i~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (452)
+.++.+.+ .+......+.+++-...+++..| .++++ ....+......++..+.......+ .+
T Consensus 237 ~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~--~a~~G~~~~~~~f~lii~a~~~~~------------~~ 302 (403)
T PF03209_consen 237 EVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKR--TAALGCLLGALAFALIILAGPLGS------------PW 302 (403)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchH--HHHHHHHHHHHHHHHHHHHHhccc------------ch
Confidence 77888775 34455567788888888887774 44444 344555555555554444333311 14
Q ss_pred hHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh------hhHHHHHHHhcc--------ccCCchHHHHH
Q 012965 353 LQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNV--------DAFPITVMFGM 418 (452)
Q Consensus 353 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~--------~~~~~~~~~~~ 418 (452)
.+....+++|++.|.......+...+..++++.|..+|....+ .+...++.+.|. ...+|..+|..
T Consensus 303 ~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~l 382 (403)
T PF03209_consen 303 LFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFAL 382 (403)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHH
Confidence 7888899999999998888889999999888888887776653 333555554321 22356666766
Q ss_pred HHHHHHHHHHHHHhhh
Q 012965 419 CSIFLLVASVLQRRLM 434 (452)
Q Consensus 419 ~~~~~~~~~~~~~~~~ 434 (452)
=++..+++..+..+..
T Consensus 383 Ea~ll~~a~~ll~~l~ 398 (403)
T PF03209_consen 383 EAVLLLAALVLLGRLD 398 (403)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 6666666665555443
No 120
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.44 E-value=6.5e-12 Score=120.83 Aligned_cols=165 Identities=13% Similarity=0.128 Sum_probs=110.2
Q ss_pred hhhHHHHHhhcCCCc--------chhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhc-Cc---c
Q 012965 57 GPYVYYLYSTYGFGK--------GEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKH-SP---Q 123 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~--------~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~-~~---~ 123 (452)
..+.+...++.|.++ ++.+...+...+...++.++.|+++||+|||+++..+.++.+++. +... .+ +
T Consensus 228 ~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~ 307 (418)
T TIGR00889 228 NIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFG 307 (418)
T ss_pred HHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhh
Confidence 344445556666553 455777777776677777889999999999999999999888864 4443 22 2
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccC----CCcch
Q 012965 124 YKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS----LGPVA 199 (452)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~----~~~~~ 199 (452)
++.+++.+++.|++.+...+.... ++.|..+++.+.... +........+|..++|.+++.+.++.+ ++|+.
T Consensus 308 ~~~l~l~~~l~g~~~~~~~~~~~~-~i~~~~p~~~~g~~~----g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~ 382 (418)
T TIGR00889 308 YALLFLSMIVYGCAFDFFNISGSV-FVEKEVPVHIRASAQ----GLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQT 382 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCHHHHHHHH----HHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHH
Confidence 456778899999999888777644 777764333333322 212122344566666677777766544 67888
Q ss_pred hhHHHHHHHHHHHHHHHhccccccCCC
Q 012965 200 PFDAAACFLAIGMVIILSSWTENYGDP 226 (452)
Q Consensus 200 ~f~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (452)
.|.+.+++.++..++..+.++|++++.
T Consensus 383 ~f~~~~~~~~i~~~l~~~~~~~~~~~~ 409 (418)
T TIGR00889 383 MWLFFAGYIAILAVLFMIFFKYSHNAI 409 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 888877777766666666677665443
No 121
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.27 E-value=6.5e-09 Score=99.48 Aligned_cols=281 Identities=17% Similarity=0.128 Sum_probs=161.9
Q ss_pred HhhhhhccccccccccccCcchHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHhHhh--hhhhhhhhhhhhhc---ccc
Q 012965 82 FGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATS--LLFSAFESWLVAEH---NKR 156 (452)
Q Consensus 82 ~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~l~~~~~~~~~l~~~r~l~G~~~~--~~~~~~~~~~i~e~---~~r 156 (452)
.+.+.+.++..|.++||+|||..+........+...+....++|.++ +.|+..+ .......+ +++|. ++|
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~~~~~~----~~~l~g~~~~~~s~~~a-~vadis~~~~R 146 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQGYWFFL----LLGLSGGFSAIFSVGFA-YVADISSEEER 146 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHHHHHhh----hcccccchhhhhhhhhh-heeeccchhHH
Confidence 34466778889999999999999999999888876443333354444 4444322 22233334 66666 344
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHhccccccCCCCcc-------
Q 012965 157 GFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSES------- 229 (452)
Q Consensus 157 ~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 229 (452)
....+..... ...+..++|.+++.+.+.. +.-.+|.+..+...+.........||+..++++.
T Consensus 147 ~~~~gll~~~--------~~~~~~~~p~~~~~~~~~~--~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~ 216 (463)
T KOG2816|consen 147 SSSIGLLSGT--------FGAGLVIGPALGGYLVKFL--GIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLREL 216 (463)
T ss_pred HHHHHHHHHH--------HHHHHhHHHHHHHHHHHhc--CchHHHHHHHHHHHHHHHHHhhccccccCcccccccccccc
Confidence 4444433222 2344455555666555443 3346788888888877777777788865544332
Q ss_pred ---hhHHHHHHHhh---HHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---HHHHHHHHHHHHHHhHH
Q 012965 230 ---KDLLTQFRGAA---VAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSL 300 (452)
Q Consensus 230 ---~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~ 300 (452)
+.......+.. ....++|..+.+.....+....-.....-..+.|++..++.+. +...+..+....++..+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~ 296 (463)
T KOG2816|consen 217 TPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLL 296 (463)
T ss_pred CCCcccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111111 1222344444444444444333222112134667777777765 45556666666777665
Q ss_pred HH-HHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhc
Q 012965 301 AS-RLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQY 379 (452)
Q Consensus 301 ~g-~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 379 (452)
.. .+...+|.|+ ....+...-.+......+.... |. ...............|...+..+..
T Consensus 297 ~~~~l~~~l~~~~--~i~lGl~~~~~~~~~~af~~~~---------------w~-~~~~~v~~~~~~~~~pa~~s~~s~~ 358 (463)
T KOG2816|consen 297 LLPLLSSILGEKR--LISLGLLSEFLQLLLFAFATET---------------WM-MFAAGVVVALAGIVFPAIRAFASIL 358 (463)
T ss_pred HHHHHHHHHhhhh--HhhHHHHHHHHHHHHHHHhccc---------------hh-hhHHHHHHHhhcchhHHHHhHHHhh
Confidence 55 6777777666 3444444444444444333333 22 3333444556666789999999999
Q ss_pred CCcccccchhhhhhhh
Q 012965 380 IPEEARSTIMNFFRIP 395 (452)
Q Consensus 380 ~p~~~r~~~~g~~~~~ 395 (452)
.+++++|+++++.+..
T Consensus 359 v~~~e~g~v~~~is~i 374 (463)
T KOG2816|consen 359 VSPEEQGKVFGIISGI 374 (463)
T ss_pred cccccccchhhHHHHH
Confidence 9999999999887764
No 122
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.24 E-value=1.5e-10 Score=111.92 Aligned_cols=145 Identities=12% Similarity=0.054 Sum_probs=100.5
Q ss_pred hhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHHhHhhhhhh
Q 012965 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFS 143 (452)
Q Consensus 65 ~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~ 143 (452)
++.+.+..+.|.+.+...+...++.++.|++.||+|||+.+..+..+.+++. +.+++++.+.+++.+++.|++.+...+
T Consensus 255 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~ 334 (420)
T PRK09528 255 ATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLV 334 (420)
T ss_pred hccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 3446666778887777766666777889999999999999999888888875 567889999999999999998887766
Q ss_pred hhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHH
Q 012965 144 AFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIIL 216 (452)
Q Consensus 144 ~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~ 216 (452)
.... ++.|..+++.+.. ....+...+..+|..+++.+.+++.+.. +|+..|...+++.++...+..
T Consensus 335 ~~~~-~~~~~~~~~~~a~----~~~~~~~~~~~lg~~ig~~~~G~l~~~~--G~~~~f~~~~~~~~i~~~~~~ 400 (420)
T PRK09528 335 GVFK-YITLNFDVRLSAT----IYLVGFQFAKQLGAVFLSTLAGNLYDSI--GFQGTYLILGGIVLLFTLISV 400 (420)
T ss_pred HHHH-HHHHHcCccceee----eeeehHHHHHHHHHHHHHHHHHHHHHhh--CchHHHHHHHHHHHHHHHHHH
Confidence 6544 6666522222211 1111122345567777778888877654 567778776666655444443
No 123
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.24 E-value=8.1e-10 Score=105.32 Aligned_cols=155 Identities=11% Similarity=0.090 Sum_probs=113.3
Q ss_pred HhhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHH
Q 012965 51 AGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMI 129 (452)
Q Consensus 51 ~~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~ 129 (452)
........+.|...+|.|.++.++|.+.....+...+..++.|++.||+|+|+.+..+.+..++.. +.++++|.+.+++
T Consensus 219 ~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (382)
T TIGR00902 219 GAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFL 298 (382)
T ss_pred HHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHH
Confidence 333333455566667899999999988887777777777889999999999999999999999886 6688999999999
Q ss_pred HHHHHHhHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHH
Q 012965 130 GRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLA 209 (452)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~ 209 (452)
.+++.|+..+...+.... ++.+. ++..+.. . ++.....+.++|..+++.+++.+.++.+ + ..|...+.+.+
T Consensus 299 ~q~l~g~~~~~~~~~~~~-~i~~~-~~~~~~~-~---q~~~~~~~~g~g~~~g~~~~G~l~~~~g--~-~~~~~~~~~~~ 369 (382)
T TIGR00902 299 LQILHCGTFAVCHLAAMR-YIAAQ-PGSEIAK-L---QALYNALAMGGLIAIFTAFAGFIYPTLG--A-GTFVFMAIIAA 369 (382)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHhC-CHhhHHH-H---HHHHHHHHHHHHHHHHHHHHHHHHHhcc--H-HHHHHHHHHHH
Confidence 999999999999999866 77765 3333222 1 2222223456777778888888887554 3 44666666665
Q ss_pred HHHHH
Q 012965 210 IGMVI 214 (452)
Q Consensus 210 ~~~~~ 214 (452)
+..++
T Consensus 370 ~~~~~ 374 (382)
T TIGR00902 370 AAFFL 374 (382)
T ss_pred HHHHH
Confidence 55443
No 124
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.21 E-value=1.4e-09 Score=104.19 Aligned_cols=151 Identities=12% Similarity=0.078 Sum_probs=98.0
Q ss_pred hhHHHH-HhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHH
Q 012965 58 PYVYYL-YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (452)
Q Consensus 58 p~l~~i-~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G 135 (452)
...|.. .+++|.++.+.+.+.+.......++.++.|+++||+|||+.+..+.....+.. .....++.+.+++.+++.+
T Consensus 237 ~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 316 (393)
T PRK15011 237 INMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNA 316 (393)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 334443 46789999899877766666566677889999999999998877766555444 3355678888888999888
Q ss_pred hHhhhhhhhhhhhhhhhc--ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHH
Q 012965 136 IATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMV 213 (452)
Q Consensus 136 ~~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~ 213 (452)
++.+...+.... +..|. ++++...+. .+.. ..+|..+++.+++.+.++ ++|+..|.+..+..++..+
T Consensus 317 ~~~g~~~~~~~~-~~~~~~p~~~g~~~~~----~~~~----~~lg~~~g~~l~G~i~~~--~g~~~~~~~~~~~~~~~~~ 385 (393)
T PRK15011 317 IYIGILGGIGML-YFQDLMPGQAGSATTL----YTNT----SRVGWIIAGSLAGIVAEI--WNYHAVFWFALVMIIATLF 385 (393)
T ss_pred HHHHHHHHHHHH-HHHHhCCCCcchHHHH----HHHH----HHHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHH
Confidence 887776665533 55665 334443332 2222 234555555666666654 4567778777766666555
Q ss_pred HHHhccc
Q 012965 214 IILSSWT 220 (452)
Q Consensus 214 ~~~~~~~ 220 (452)
... +.|
T Consensus 386 ~~~-~~~ 391 (393)
T PRK15011 386 CLL-RIK 391 (393)
T ss_pred HHH-hhc
Confidence 544 444
No 125
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.17 E-value=4.7e-08 Score=90.83 Aligned_cols=330 Identities=15% Similarity=0.128 Sum_probs=183.6
Q ss_pred hHHHHHHHHHHHHhhhhh-hhhHHHH-Hh-hcCCCcchhH-H---HHHHHHhhhhhccccccccccccCcchHHHHHHHH
Q 012965 39 KNNYLLVYSLMMAGDWLQ-GPYVYYL-YS-TYGFGKGEIG-Q---LFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLT 111 (452)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~-~p~l~~i-~~-~~g~s~~~~g-~---~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~ 111 (452)
++..+.+|....+-+.=. -|++.+. .+ +.|++..|+. - +.+-.++ ..-.+...+.|..+.|++++++.+.
T Consensus 4 ~~~~~llc~~gf~~~frPsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl---~~l~~vflltd~l~Ykpviil~~~~ 80 (412)
T PF01770_consen 4 KKITLLLCLFGFFKEFRPSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYL---AFLLPVFLLTDYLRYKPVIILQALS 80 (412)
T ss_pred hHHHHHHHHHHHHHhcCCCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHH---HHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 334444444443332222 4555333 34 4899988886 2 2223333 2333688999999999999999998
Q ss_pred HHHHH-HHhcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 012965 112 YILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLV 190 (452)
Q Consensus 112 ~~i~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~ 190 (452)
..+.. +.-+.++.+.+-+..++.|++.+....-. + ++-...++++.....+ .......+|..++.++| ..+.
T Consensus 81 ~i~t~~lll~~~sv~~mq~~q~~yg~~~a~evay~-s-Yiys~v~~~~yq~vts-~~raa~l~g~~~s~~lg----Qllv 153 (412)
T PF01770_consen 81 YIITWLLLLFGTSVLAMQLMQFFYGLATAAEVAYY-S-YIYSVVDKEHYQKVTS-YTRAATLVGRFISSLLG----QLLV 153 (412)
T ss_pred HHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHH-H-HheeecCHHHHHHHHH-HHHHHHHHHHHHHHHHH----HHHH
Confidence 88875 66888999999999999999998875443 4 4332222222222111 12223344444444444 4444
Q ss_pred cccCCCcchhhHHHHHHHHHHHHHHHhccccccC-------------------CC-Cc---ch---------------hH
Q 012965 191 DSFSLGPVAPFDAAACFLAIGMVIILSSWTENYG-------------------DP-SE---SK---------------DL 232 (452)
Q Consensus 191 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~-------------------~~-~~---~~---------------~~ 232 (452)
...+...+....+......++.++.. .+|..++ ++ ++ .+ +.
T Consensus 154 s~~~~sy~~L~~isl~~~~~a~~~~~-fLP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (412)
T PF01770_consen 154 SFGGVSYFQLNYISLASVSLALLIAL-FLPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSV 232 (412)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHH-HcCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHH
Confidence 32334444444444333333322222 1221000 00 00 00 01
Q ss_pred HHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCC---CC--CchHHHHHHHHHHHHHHhHHHHHHhcc
Q 012965 233 LTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPND---EE--IPHGFIFATFMLASMLGSSLASRLMAR 307 (452)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~---~~--~~~~~~~~~~~i~~~~~~~~~g~l~dr 307 (452)
.++..++.++..++|+.+...+-..+...+ +..+.+|....-++. .+ .--|.+-+...+.+.++.+..|++..+
T Consensus 233 l~~l~~~~~~~y~~~~ll~WSlWWa~atcg-y~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~ 311 (412)
T PF01770_consen 233 LRLLWKDFKSCYSNPRLLLWSLWWAFATCG-YYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVN 311 (412)
T ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHhH-HHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcc
Confidence 112233445556677776666555544444 333344433332222 11 112777777778888888999998666
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccc
Q 012965 308 SPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARST 387 (452)
Q Consensus 308 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~ 387 (452)
+.+..+..+.....+.+..+.+.....+. |...++.++++..+....++....++....++.-+.
T Consensus 312 w~~~~~l~l~~~S~l~a~~L~lm~~t~~I---------------wv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaL 376 (412)
T PF01770_consen 312 WDRWGELALGVFSLLQAGLLFLMSFTGNI---------------WVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYAL 376 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceee
Confidence 66554323333333334444443333333 678888999998888888888888888888888899
Q ss_pred hhhhhhhh
Q 012965 388 IMNFFRIP 395 (452)
Q Consensus 388 ~~g~~~~~ 395 (452)
.+|++.+.
T Consensus 377 VFGiNtf~ 384 (412)
T PF01770_consen 377 VFGINTFV 384 (412)
T ss_pred eeeeHHHH
Confidence 98885543
No 126
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.16 E-value=1.6e-08 Score=97.36 Aligned_cols=323 Identities=15% Similarity=0.060 Sum_probs=161.8
Q ss_pred hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccC-----cchHHHHHHHHHHHHH-HHhc----CccHHH
Q 012965 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQG-----RKRACVTYCLTYILSC-ITKH----SPQYKI 126 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~G-----rr~~l~~~~~~~~i~~-l~~~----~~~~~~ 126 (452)
.+..|.+.+++|+++++.........+.. ..-|+.|.++|.+- ||+-++++.++.+++. ..+. ..+...
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~ 88 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAI 88 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhh
Confidence 44556778999999999987766665533 44678999999763 4444555655554443 2222 346667
Q ss_pred HHHHHHHHHhHhhhhhhhhhhhhhhhcccc-cchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHH
Q 012965 127 LMIGRILGGIATSLLFSAFESWLVAEHNKR-GFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAA 205 (452)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~e~~~r-~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~ 205 (452)
..+.-++..+|.......+.+ ++.|..+| ....+..++..... ..+|.+++..+++.+.+..+ ++..|.+.+
T Consensus 89 ~~~~l~la~~g~a~~DV~aDa-~vvE~~~~~p~~~g~lqS~~~~~----~~~G~lv~~~l~G~l~~~~~--~~~~f~i~~ 161 (433)
T PF03092_consen 89 AVVLLFLASFGYAFADVAADA-LVVELARREPESRGDLQSFVWGV----RSVGSLVGSLLSGPLLDSFG--PQGVFLISA 161 (433)
T ss_pred HHHHHHHHHHHHHHHHHhhhH-HHHHHhhcCCchhHHHHHHHHHH----HHHHHHHHHHhhhhhhhcCC--CeEEehHHH
Confidence 777788889999999888877 77776222 22233333333333 33455555566666665444 455566666
Q ss_pred HHHHHHHHHHHhccccccCCC--------Cc-chhH---HHHHHHhhHHhhcchhHHHHHH-HHHhhhchhhhh-h-hhh
Q 012965 206 CFLAIGMVIILSSWTENYGDP--------SE-SKDL---LTQFRGAAVAIASDEKIALLGA-IQSLFEGSMYTF-V-FLW 270 (452)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~--------~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~-~~~ 270 (452)
.+..+..+......+|++.++ ++ .+.. .++.....++.++++..+.... ..++........ . ..|
T Consensus 162 ~~~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy 241 (433)
T PF03092_consen 162 ALPLLMLIVALFLLEERKVRPADEVFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFY 241 (433)
T ss_pred HHHHHHHHHHHHhhhhccccccchhhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEE
Confidence 555554443333334311111 00 0000 1222334455566666665544 222222111110 0 111
Q ss_pred ccccccCCCCCchH---HHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHH-HHHhhhcCCCCcCCCC
Q 012965 271 TPALSPNDEEIPHG---FIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLP-IVTSFLVAPSNVKSGG 346 (452)
Q Consensus 271 ~p~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 346 (452)
......++.+.++. ....+..++.++|..+..+...+..-|+ +.....+......+. .......+..- .-++
T Consensus 242 ~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~---~~~~t~~~~~~~~l~~~~lv~~~n~~~-Gi~d 317 (433)
T PF03092_consen 242 FQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRR---IFVVTTLVSVLASLFDLLLVTRWNLDL-GIPD 317 (433)
T ss_pred EEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH---HHHHHHHHHHHHhcccEEEEEEEeeee-CcCC
Confidence 11111113335553 3334444556666666666555554443 222222222111111 00000000000 0000
Q ss_pred cccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 347 ISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 347 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
. +..+.-..+.....+..+-+...+++|+.|+..-|+.+++....
T Consensus 318 ~----~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~ 362 (433)
T PF03092_consen 318 Q----WFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASF 362 (433)
T ss_pred e----EEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHH
Confidence 0 12233344455555555556778899999999999888776654
No 127
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.15 E-value=2.3e-09 Score=102.87 Aligned_cols=147 Identities=20% Similarity=0.252 Sum_probs=92.8
Q ss_pred hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHH
Q 012965 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G 135 (452)
.++++...++.|.+ +.+.......+...++.++.|++.||+|||+.+..+..+.+++. +..+.++.+.+++.+++.|
T Consensus 236 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 313 (399)
T PRK05122 236 ATFITLYYAARGWD--GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTG 313 (399)
T ss_pred HHHHHHHHHHcccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 34444555566653 33433344444445666789999999999999988888777775 5567788888888999999
Q ss_pred hHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHH
Q 012965 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (452)
Q Consensus 136 ~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~ 212 (452)
++.+...+.... ...|. ++|++..+ ..+.. ..+|..+++.+.+.+.+. ++|+..+...+...++..
T Consensus 314 ~~~~~~~~~~~~-~~~~~~~~~~~g~~~g----~~~~~----~~~g~~~~~~~~g~l~~~--~g~~~~~~~~~~~~~~~~ 382 (399)
T PRK05122 314 FGFSLVFPALGV-EAVKRVPPQNRGAALG----AYSVF----LDLSLGITGPLAGLVASW--FGYPSIFLAAALAALLGL 382 (399)
T ss_pred HhHHHHHHHHHH-HHHHhCCHHHHHHHHH----HHHHH----HHHHHHHHHHHHHHHHHH--cCHHHHHHHHHHHHHHHH
Confidence 999988776544 44444 33344333 22222 334444445555565543 456677777766666555
Q ss_pred HHHH
Q 012965 213 VIIL 216 (452)
Q Consensus 213 ~~~~ 216 (452)
....
T Consensus 383 ~~~~ 386 (399)
T PRK05122 383 ALTW 386 (399)
T ss_pred HHHH
Confidence 4444
No 128
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.14 E-value=4.2e-09 Score=100.15 Aligned_cols=144 Identities=14% Similarity=0.169 Sum_probs=95.4
Q ss_pred HHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHHhHhhhh
Q 012965 63 LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLL 141 (452)
Q Consensus 63 i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G~~~~~~ 141 (452)
+.+++|.++.+.+.+.........++.++.|++.||+|||+.+..+.+...+.. ...+.++.+.+.+.+++.|++.+..
T Consensus 226 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 305 (375)
T TIGR00899 226 IIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGIL 305 (375)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346789999999877666655555666789999999999999888776655544 3455678888888999999998887
Q ss_pred hhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHHH
Q 012965 142 FSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVII 215 (452)
Q Consensus 142 ~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~ 215 (452)
.+.... +..|..++++. . .....+.. ..+|..+++.+.+.+.+.. +|+..|...++..++..+..
T Consensus 306 ~~~~~~-~~~~~~~~~~~-~-~~~~~~~~----~~~g~~~g~~~~g~~~~~~--g~~~~~~~~~~~~~~~~~~~ 370 (375)
T TIGR00899 306 AGIGML-YFQDLMPGRAG-A-ATTLYTNT----GRVGWIIAGSVGGILAERW--SYHAVYWFAIVMLIVALFCL 370 (375)
T ss_pred HHHHHH-HHHHhCcchhh-H-HHHHHHHH----HHHHHHHHHHHHHHHHHhc--cchhHHHHHHHHHHHHHHHH
Confidence 776644 66665322221 1 11122222 2255566666666666543 55677777776666555444
No 129
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.13 E-value=5.9e-09 Score=99.41 Aligned_cols=148 Identities=12% Similarity=0.101 Sum_probs=103.5
Q ss_pred hhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHHh
Q 012965 58 PYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGI 136 (452)
Q Consensus 58 p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G~ 136 (452)
.+.+...+|.|.++.+.|...+.......+...+.|++.||+|+|+.+..+....+++. +.+..++.+.+++..++.|+
T Consensus 226 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 305 (382)
T PRK11128 226 GFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCG 305 (382)
T ss_pred HHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 34445557899999999988887777677777889999999999999999988888875 55788999999999999999
Q ss_pred HhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHH
Q 012965 137 ATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVI 214 (452)
Q Consensus 137 ~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~ 214 (452)
+.+...+.... ++.+.+ +++.... .+.....+...|..+++.+++.+.+..++ ..+...+.+.++....
T Consensus 306 ~~~~~~~~~~~-~~~~~~-~~~~~~~----~~~~~~~~~~~g~~ig~~i~G~l~~~~g~---~~~~~~~~~~~~~~~~ 374 (382)
T PRK11128 306 TFTVCHLAAMR-YIAARP-GSEVIRL----QALYSALAMGGSIAIMTVLSGFLYQHLGA---GVFWVMALVALPALFI 374 (382)
T ss_pred HHHHHHHHHHH-HHHHCC-HhhhHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHH
Confidence 99988777655 666542 2222221 22222233445666777778887765543 3455555555544433
No 130
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.13 E-value=6e-09 Score=99.68 Aligned_cols=160 Identities=14% Similarity=0.086 Sum_probs=98.4
Q ss_pred hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHh-cCccHHHHHHHHHHH
Q 012965 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITK-HSPQYKILMIGRILG 134 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~-~~~~~~~l~~~r~l~ 134 (452)
...+|...+++|.+..+.|...+...+.+.++.+..|++.||+|||+.+..+..+..++. +.. +.++...+. -++.
T Consensus 225 ~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~l~ 302 (393)
T PRK09705 225 IAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLW--AMVC 302 (393)
T ss_pred HHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHH--HHHH
Confidence 444566667789999999988787777777888899999999999999988877776664 333 333333222 3456
Q ss_pred HhHhhhhhhhhhhhhhhhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHH
Q 012965 135 GIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMV 213 (452)
Q Consensus 135 G~~~~~~~~~~~~~~i~e~-~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~ 213 (452)
|++.+...+.... ...+. .+++.+... .+.....+ .++..++|.+.+++.+..+ ++...|.+.++..++...
T Consensus 303 g~g~g~~~~~~~~-~~~~~~~~~~~~g~~----~g~~~~~~-~~~~~~gp~~~G~l~~~~g-~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK09705 303 GLGLGGAFPLCLL-LALDHSVQPAIAGKL----VAFMQGIG-FIIAGLAPWFSGVLRSISG-NYLMDWAFHALCVVGLMI 375 (393)
T ss_pred HHhccchHHHHHH-HHHhhcCCHHHHHHH----HHHHHHHH-HHHHHHHHHHHHHHHHHhC-CchHHHHHHHHHHHHHHH
Confidence 7887777776544 33333 222222222 22222222 2445566677777776544 245666666666655555
Q ss_pred HHHhccccccCC
Q 012965 214 IILSSWTENYGD 225 (452)
Q Consensus 214 ~~~~~~~~~~~~ 225 (452)
......||++++
T Consensus 376 ~~~~~~~~~~~~ 387 (393)
T PRK09705 376 ITLRFAPARFPQ 387 (393)
T ss_pred HHHHhccccccc
Confidence 555456665544
No 131
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.12 E-value=4.3e-09 Score=101.37 Aligned_cols=150 Identities=18% Similarity=0.133 Sum_probs=97.0
Q ss_pred hhhHHHHHhhcCCCcchh----HHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHH
Q 012965 57 GPYVYYLYSTYGFGKGEI----GQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGR 131 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~~----g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r 131 (452)
.+.++...++.+.+..+. +.+.....+.+.+..+..|++.||+|||+.+..+..+..++. ...+.++.+.+.+.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (408)
T PRK09874 239 APILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILR 318 (408)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 455555445543333332 334344445555677789999999999999998888777765 456678888889999
Q ss_pred HHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHH
Q 012965 132 ILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFL 208 (452)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~ 208 (452)
++.|++.+...+...+ .+.+. +++++..+.... ... +|..++|.+++.+.+. ++|+..|.+.+++.
T Consensus 319 ~~~g~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~----~~~----~g~~~gp~~~G~l~~~--~g~~~~f~~~~~~~ 387 (408)
T PRK09874 319 FLLGAADGALLPAVQT-LLVYNSSNQIAGRIFSYNQS----FRD----IGNVTGPLMGAAISAN--YGFRAVFLVTAGVV 387 (408)
T ss_pred HHHHhhhHhhHHHHHH-HHHHhCCcccceeeehHHHH----HHH----HHHHhhHHHHHHHHhh--cchhHHHHHHHHHH
Confidence 9999999988887655 54443 345555443322 223 4445555666665543 45677888887777
Q ss_pred HHHHHHHHh
Q 012965 209 AIGMVIILS 217 (452)
Q Consensus 209 ~~~~~~~~~ 217 (452)
++..+....
T Consensus 388 l~~~~~~~~ 396 (408)
T PRK09874 388 LFNAVYSWN 396 (408)
T ss_pred HHHHHHHHH
Confidence 766655543
No 132
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.11 E-value=7.7e-09 Score=99.90 Aligned_cols=156 Identities=17% Similarity=0.073 Sum_probs=100.4
Q ss_pred hhHHHHHhh-cCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHH
Q 012965 58 PYVYYLYST-YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (452)
Q Consensus 58 p~l~~i~~~-~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G 135 (452)
..+|...++ +|.++.+.|.+.+...+...+++++.|++.||.++|+.+..+..+.+++. +..+.++.+...++.++.|
T Consensus 244 ~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 323 (417)
T PRK10489 244 VLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFG 323 (417)
T ss_pred HhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHH
Confidence 344555565 89999999988777777677778889999999888888888877777765 5577888888888899999
Q ss_pred hHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHH
Q 012965 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (452)
Q Consensus 136 ~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~ 212 (452)
++.+...+...+ ++.|. +.|++..+. .+.... +|..+++.+.+.+.+.. +.+..+...+...++..
T Consensus 324 ~~~~~~~~~~~~-~~~~~~p~~~~g~~~g~----~~~~~~----~g~~~g~~l~G~l~~~~--g~~~~~~~~~~~~~~~~ 392 (417)
T PRK10489 324 YLSAISSLLQYT-LLQTQTPDEMLGRINGL----WTAQNV----TGDAIGAALLGGLGAMM--TPVASASASGFGLLIIG 392 (417)
T ss_pred HHHHHHHHHHHH-HHHhhCCHHHHHHHHHH----HHHHHh----hhHhHHHHHHHHHHHHh--chhhHHHHHHHHHHHHH
Confidence 988877665544 66655 334444432 222333 34444455555555433 44455655555444443
Q ss_pred HHHHhccccccC
Q 012965 213 VIILSSWTENYG 224 (452)
Q Consensus 213 ~~~~~~~~~~~~ 224 (452)
.......|+.++
T Consensus 393 ~~~~~~~~~~~~ 404 (417)
T PRK10489 393 VLLLLVLGELRR 404 (417)
T ss_pred HHHHHhcccccc
Confidence 444334455443
No 133
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.10 E-value=1.2e-08 Score=97.33 Aligned_cols=149 Identities=17% Similarity=0.151 Sum_probs=98.6
Q ss_pred hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHh
Q 012965 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGI 136 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~l~~~~~~~~~l~~~r~l~G~ 136 (452)
..++|...++.|.++++.|...+...+...+++.+.|++.||+|+|+++..+..+.+++.+... + ........++.|+
T Consensus 220 ~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~-~-~~~~~~~~~l~g~ 297 (381)
T PRK03633 220 YGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML-S-QAAMAPALFILGA 297 (381)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh-h-hHHHHHHHHHHHH
Confidence 3455666677899998999877777777778888899999999999999888877777643222 2 2344457788888
Q ss_pred HhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHHH
Q 012965 137 ATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVII 215 (452)
Q Consensus 137 ~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~ 215 (452)
+.....|...+ .+.|..++++..+.. + ....+..+|..++|.+++.+.++.+ ++..|.+.+.+.++.....
T Consensus 298 ~~~~~~p~~~~-~~~~~~~~~~~~~~~----~-~~~~~~~lG~~igp~~~G~l~~~~g--~~~~f~~~~~~~l~~~~~~ 368 (381)
T PRK03633 298 AGFTLYPVAMA-WACEKVEHHELVAMN----Q-ALLLSYTVGSLLGPSFTAMLMQNYS--DNLLFIMIASVSFIYLLML 368 (381)
T ss_pred HHHhHHHHHHH-HHHccCCHHHHHHHH----H-HHHHHHHHHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHHHHHHH
Confidence 77777777755 566653333322211 1 2223455677777788887776554 4566777666665544443
No 134
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.09 E-value=3.3e-09 Score=100.77 Aligned_cols=142 Identities=15% Similarity=0.108 Sum_probs=95.2
Q ss_pred hHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccH--HHHHHHHHHHH
Q 012965 59 YVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQY--KILMIGRILGG 135 (452)
Q Consensus 59 ~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~--~~l~~~r~l~G 135 (452)
..+...+++|.++.+.+...+...+...++.++.|++.||+|||+.+..+..+.+++. +..+.++. ..+....++.|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 306 (377)
T TIGR00890 227 LYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVF 306 (377)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHH
Confidence 3445567889888888887777777777888899999999999999999888887765 44555532 33456678888
Q ss_pred hHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHH
Q 012965 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIG 211 (452)
Q Consensus 136 ~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~ 211 (452)
++.+...+.... ++.|. ++|++..+.. + ....+|..+++.+.+.+.++. +|+..|.+.+++.+++
T Consensus 307 ~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~----~----~~~~~g~~~~~~~~g~l~~~~--g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 307 FTWGGTISLFPS-LVSDIFGPANSAANYGFL----Y----TAKAVAGIFGGLIASHALTEI--GFEYTFIVTGAFALTS 374 (377)
T ss_pred HHhccchhccHH-HHHHHhhhhhhhhHhHHH----H----HHHHHHHHHHHHHHHHHHhhh--chhhHHHHHHHHHHHh
Confidence 888777665534 66665 4444444322 2 223456666666666666544 4567777766655543
No 135
>PRK03545 putative arabinose transporter; Provisional
Probab=99.08 E-value=1.2e-08 Score=97.70 Aligned_cols=141 Identities=14% Similarity=0.066 Sum_probs=91.2
Q ss_pred HhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHH-H-HHhcCccHHHHHHHHHHHHhHhhhh
Q 012965 64 YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILS-C-ITKHSPQYKILMIGRILGGIATSLL 141 (452)
Q Consensus 64 ~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~-~-l~~~~~~~~~l~~~r~l~G~~~~~~ 141 (452)
.+++|.|..+.+.+.+...+.+.+++++.|++.||+|||+.. .+..+..++ . +....++.+.+.+..++.|++.+..
T Consensus 233 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~ 311 (390)
T PRK03545 233 QQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCI 311 (390)
T ss_pred HHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcc
Confidence 455799998898887777777778888899999999988654 444444443 2 3356778888888999999988766
Q ss_pred hhhhhhhhhhhc--ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHH
Q 012965 142 FSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIIL 216 (452)
Q Consensus 142 ~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~ 216 (452)
.+.... .+.|. ++|++..+ ..+.... +|..+++.+++.+.++ ++++..|...+.+.++......
T Consensus 312 ~~~~~~-~~~~~~~~~~~~~~g----~~~~~~~----~g~~~G~~~~G~~~~~--~g~~~~~~~~~~~~~~~~~~~~ 377 (390)
T PRK03545 312 GLAMQV-KVLKLAPDATDVAMA----LFSGIFN----IGIGAGALLGNQVSLH--LGLSSIGYVGAALALAALVWSI 377 (390)
T ss_pred hHHHHH-HHHHhCCCcHHHHHH----HHHHHHH----HHHHHHHHHHHHHHhc--cChhHHHHHHHHHHHHHHHHHH
Confidence 665544 55554 23333222 2332333 3444455666666644 5667778777777666555544
No 136
>PRK03699 putative transporter; Provisional
Probab=99.07 E-value=5.8e-09 Score=99.89 Aligned_cols=145 Identities=12% Similarity=0.082 Sum_probs=96.8
Q ss_pred hhHHHHH-hhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHH
Q 012965 58 PYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (452)
Q Consensus 58 p~l~~i~-~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G 135 (452)
..+|... +++|+|+.+.+.+.+...+...++.++.|+++||+|||+.+.....+..+.. +....++.+.+.+..++.|
T Consensus 226 ~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 305 (394)
T PRK03699 226 SWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLG 305 (394)
T ss_pred HHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Confidence 4455555 6789999999988777777777888889999999999999888777666654 4456777777777788899
Q ss_pred hHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHH
Q 012965 136 IATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIG 211 (452)
Q Consensus 136 ~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~ 211 (452)
++.+...+...+ +..|..++.. ... .+... ....+|..++|.+.+.+.+..+ ++..++..+++.++.
T Consensus 306 ~~~~~~~~~~~~-~~~~~~~~~~-~~~----~g~~~-~~~~~g~~i~p~~~G~l~~~~g--~~~~~~~~~~~~~~~ 372 (394)
T PRK03699 306 FFSSAIYTTIIT-LGSQQTKVAS-PKL----VNFIL-TCGTIGTMLTFVVTSPIVAHFG--LQAALLTANGLYAVV 372 (394)
T ss_pred HHHHHHHHHHHH-HHHHHccCCC-HHH----HHHHH-HhhhHHHHHHHHHHHHHHHHhC--chhhhhhhHHHHHHH
Confidence 888877776544 4444422111 111 11111 2234677777788887776544 456666555554444
No 137
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.07 E-value=7.4e-09 Score=99.65 Aligned_cols=147 Identities=15% Similarity=0.127 Sum_probs=98.2
Q ss_pred hHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHHhH
Q 012965 59 YVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIA 137 (452)
Q Consensus 59 ~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G~~ 137 (452)
..|...++.|.++.+.+.......+.+.+++++.|++.||+|||+.+..+.....++. +..+.++.+.+.+..++.|++
T Consensus 242 ~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 321 (406)
T PRK11551 242 WLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLF 321 (406)
T ss_pred HHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 4566778889999999988888777778888899999999999999888766666654 446677888787888888888
Q ss_pred hhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHH
Q 012965 138 TSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVI 214 (452)
Q Consensus 138 ~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~ 214 (452)
.+...+...+ +..|. ++|++..+..+. ...+|..+++.+.+.+.++. .+|...+.......++..+.
T Consensus 322 ~~~~~~~~~~-~~~~~~p~~~~g~~~g~~~~--------~~~~g~~~g~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~ 391 (406)
T PRK11551 322 VVGGQSVLYA-LAPLFYPTQVRGTGVGAAVA--------VGRLGSMAGPLLAGQLLALG-RSTVGVIGASIPVILVAALA 391 (406)
T ss_pred HHhHHHHHHH-HHHHHcchhhhhhhhhHHHH--------hhhHHHHHHhhhHhhhhccC-CchHHHHHHHHHHHHHHHHH
Confidence 7776666544 55665 344554442222 23355566667777666532 23444455444444444333
Q ss_pred H
Q 012965 215 I 215 (452)
Q Consensus 215 ~ 215 (452)
.
T Consensus 392 ~ 392 (406)
T PRK11551 392 A 392 (406)
T ss_pred H
Confidence 3
No 138
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.04 E-value=8.6e-09 Score=101.56 Aligned_cols=267 Identities=15% Similarity=0.155 Sum_probs=163.8
Q ss_pred HHHHHHHHHHhhhhh----hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-
Q 012965 42 YLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC- 116 (452)
Q Consensus 42 ~~~~~~~~~~~~~~~----~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~- 116 (452)
++.+..+..+.+.+. ...+..+-+.++++.++.|.+.+..-+...+...+..+..-|.-|-|.+-.++++++++.
T Consensus 98 fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsl 177 (735)
T KOG3626|consen 98 FLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSL 177 (735)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHH
Confidence 344444444444443 333445667899999998877666555555665678899999888889999999998875
Q ss_pred HHhcC--------------------c-----------------------------c--HH-HHHHHHHHHHhHhhhhhhh
Q 012965 117 ITKHS--------------------P-----------------------------Q--YK-ILMIGRILGGIATSLLFSA 144 (452)
Q Consensus 117 l~~~~--------------------~-----------------------------~--~~-~l~~~r~l~G~~~~~~~~~ 144 (452)
++++- + + ++ .++++.++.|+|....++.
T Consensus 178 l~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tl 257 (735)
T KOG3626|consen 178 LFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTL 257 (735)
T ss_pred HHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccC
Confidence 43321 0 0 22 6678899999999999999
Q ss_pred hhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc---------cC--C--CcchhhHHHHHHHHHH
Q 012965 145 FESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS---------FS--L--GPVAPFDAAACFLAIG 211 (452)
Q Consensus 145 ~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~---------~~--~--~~~~~f~~~~~~~~~~ 211 (452)
..+ |+.|..+++.-.-.++..+. ...+|-++|.+++++...+-.+. .+ | .|..-|++.+.+.++.
T Consensus 258 Gis-YiDDnvk~~~SplYlgi~~~-~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~ 335 (735)
T KOG3626|consen 258 GIS-YIDDNVKKKNSPLYLGILYS-MAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFS 335 (735)
T ss_pred CCc-cccccccccCCcHHHHHHHH-HHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHH
Confidence 977 99998555444443333332 33334444444444433322222 01 1 2445566666666655
Q ss_pred HHHHHhccccccCCCC-------------------cch---hHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhh
Q 012965 212 MVIILSSWTENYGDPS-------------------ESK---DLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFL 269 (452)
Q Consensus 212 ~~~~~~~~~~~~~~~~-------------------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (452)
.+.++ ..|++.+++. +.. +..++..+..+.+++||.+....+...+-.....+ ..+
T Consensus 336 a~p~f-~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G-~~t 413 (735)
T KOG3626|consen 336 AVPLF-FFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITG-YIT 413 (735)
T ss_pred HHHHH-hCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhh-HHH
Confidence 55544 3343222110 001 12234445667788888887777666655555444 689
Q ss_pred hccccccCCCCCchHHHH---HHHH-HHHHHHhHHHHHHhccCCCCc
Q 012965 270 WTPALSPNDEEIPHGFIF---ATFM-LASMLGSSLASRLMARSPPRV 312 (452)
Q Consensus 270 ~~p~~~~~~~~~~~~~~~---~~~~-i~~~~~~~~~g~l~dr~g~~~ 312 (452)
|+|.|++.+++.+++..- ...+ -+..+|.+++|++.+|+..+.
T Consensus 414 FlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~ 460 (735)
T KOG3626|consen 414 FLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSA 460 (735)
T ss_pred hhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccH
Confidence 999999999999775333 2333 346778889999999985444
No 139
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.03 E-value=1.1e-09 Score=88.02 Aligned_cols=126 Identities=24% Similarity=0.385 Sum_probs=86.5
Q ss_pred hhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccch
Q 012965 84 SSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFE 159 (452)
Q Consensus 84 ~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~ 159 (452)
...+.+++.|++.||+|||+.+..+.....++. .....++++.+.+.+++.|++.+...+.... ++.|. ++|++.
T Consensus 10 ~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~ 88 (141)
T TIGR00880 10 GQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAA-LIADIYPPEERGVA 88 (141)
T ss_pred HHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHH-HHHHHCChhhhhHH
Confidence 344677789999999999999999988888775 5577899999999999999999988877755 66666 334443
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHhccc
Q 012965 160 QQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWT 220 (452)
Q Consensus 160 ~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 220 (452)
.+. ... ...+|..+++.+.+.+.+.. +|+..+........+.........|
T Consensus 89 ~~~----~~~----~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (141)
T TIGR00880 89 LGL----MSA----GIALGPLLGPPLGGVLAQFL--GWRAPFLFLAILALAAFILLAFLLP 139 (141)
T ss_pred HHH----HHH----hHHHHHHHhHHhHHHHhccc--chHHHHHHHHHHHHHHHHHHhhcCC
Confidence 332 222 23355555556666655433 4566677766665555555443334
No 140
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.01 E-value=2.4e-08 Score=98.44 Aligned_cols=160 Identities=15% Similarity=0.181 Sum_probs=92.2
Q ss_pred hhhHHHHH-hhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHH-HH--H-HhcCccHHHHHHHH
Q 012965 57 GPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL-SC--I-TKHSPQYKILMIGR 131 (452)
Q Consensus 57 ~p~l~~i~-~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i-~~--l-~~~~~~~~~l~~~r 131 (452)
..++|... +++|.+..+.+.......+...++.++.|+++||+|||+++..+.++..+ +. + ...+++...+++++
T Consensus 270 ~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (490)
T PRK10642 270 LTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGL 349 (490)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 34555655 56788887766665555565667778899999999999998888765443 22 1 22355677888899
Q ss_pred HHHHhHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHH
Q 012965 132 ILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIG 211 (452)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~ 211 (452)
++.|++.+........ ++.|.-+...+.......++ ++. ++..++|.+.+++.+..+ +|+.++....+..++.
T Consensus 350 ~~~g~~~~~~~g~~~~-~~~~~~p~~~Rg~~~g~~~~----~~~-~~g~~~p~i~g~l~~~~~-~~~~~~~~~~~~~~i~ 422 (490)
T PRK10642 350 LMLAVILNCFTGVMAS-TLPAMFPTHIRYSALAAAFN----ISV-LVAGLTPTLAAWLVESTQ-NLMMPAYYLMVVAVIG 422 (490)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHCCCccchHHHHHHHH----HHH-HHHHHHHHHHHHHHHHhC-CchHHHHHHHHHHHHH
Confidence 9998877665554433 55665333333221222222 222 223445555555554322 3455555444444444
Q ss_pred HHHHHhccccccC
Q 012965 212 MVIILSSWTENYG 224 (452)
Q Consensus 212 ~~~~~~~~~~~~~ 224 (452)
.+... ..||+++
T Consensus 423 ~~~~~-~~pes~~ 434 (490)
T PRK10642 423 LITGV-TMKETAN 434 (490)
T ss_pred HHHHH-HhccccC
Confidence 33333 4577654
No 141
>PRK10054 putative transporter; Provisional
Probab=99.00 E-value=1.1e-08 Score=97.91 Aligned_cols=130 Identities=10% Similarity=0.093 Sum_probs=86.5
Q ss_pred hHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHH
Q 012965 248 KIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSS 324 (452)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~ 324 (452)
.++.+.....+...+ +.....+.|.++++..|.+. |...+...+...+++++.|+++||+|||+ .+..+.....
T Consensus 8 ~~~~l~~~~~~~~~g-~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~--~~~~~~~~~~ 84 (395)
T PRK10054 8 STSALLASSLLLTIG-RGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKR--YMLLAITAFA 84 (395)
T ss_pred hHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcch--hHHHHHHHHH
Confidence 344444444444333 33356778888877667655 66777777888999999999999999987 3444444444
Q ss_pred HHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 325 VSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
+......+..+. +..++...+.+.+.+...+...++..|..|+++|++++|+.+..
T Consensus 85 ~~~~~~~~~~~~---------------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 140 (395)
T PRK10054 85 SGFIAIPLVNNV---------------TLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTM 140 (395)
T ss_pred HHHHHHHHHhHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHH
Confidence 444443332222 23344455566666666788899999999999999998877654
No 142
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.99 E-value=9.5e-09 Score=100.50 Aligned_cols=160 Identities=14% Similarity=0.113 Sum_probs=103.7
Q ss_pred hcchhHHHHHHHHHhhhchhhhhhhhhccccccCC--CCCch---HHHHHHHHHHHHHHhHHHHHHhcc-CCCCchhHHH
Q 012965 244 ASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPND--EEIPH---GFIFATFMLASMLGSSLASRLMAR-SPPRVESYMQ 317 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr-~g~~~~~~~~ 317 (452)
+++|+.........+.....++....++|.|+++. .|.+. +...+...++..++.+++|+++|| +|||+. +.
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~--l~ 83 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKT--MV 83 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHH--HH
Confidence 34555555444444454444444678888888654 66644 677788888999999999999999 899883 55
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCccc---ccchhhhhhh
Q 012965 318 IVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA---RSTIMNFFRI 394 (452)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~---r~~~~g~~~~ 394 (452)
.+..+..++.......... +...++..+.+++.+...|...++..|.+|+++ |+++.++.+.
T Consensus 84 ~~~~~~~~g~~~~~~~~~~---------------~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~ 148 (475)
T TIGR00924 84 LGGIVLMLGHFMLAMSIYP---------------DLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYM 148 (475)
T ss_pred HHHHHHHHHHHHHHhcccH---------------hHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHH
Confidence 5555555554443322111 245566777888888888999999999998764 7778777665
Q ss_pred h------hhHHHHHHHhccccCCchHHHHHHHHH
Q 012965 395 P------LNIFVCVVLYNVDAFPITVMFGMCSIF 422 (452)
Q Consensus 395 ~------~~~~~~~~l~~~~~~~~~~~~~~~~~~ 422 (452)
. .++.+++.+.+. .++...+..+++.
T Consensus 149 ~~niG~~ig~~l~g~l~~~--~g~~~~f~~~~~~ 180 (475)
T TIGR00924 149 SINIGSFISPLLAGVIAEN--YGYHVGFNLAAVG 180 (475)
T ss_pred HHHHHHHHHHHHHHHHHHh--cChHHHHHHHHHH
Confidence 4 233444555544 3444555444433
No 143
>PRK12382 putative transporter; Provisional
Probab=98.98 E-value=4.2e-08 Score=93.95 Aligned_cols=147 Identities=22% Similarity=0.340 Sum_probs=95.0
Q ss_pred hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHH
Q 012965 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G 135 (452)
..+.+...++.+.+. .+...........++.++.|++.||+|+||.+..+..+.+++. +..+.++.+.+++.+++.|
T Consensus 236 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 313 (392)
T PRK12382 236 GTFVSLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTG 313 (392)
T ss_pred HHHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 344445556666654 3433333334445667789999999999999999888888775 5567788888888999999
Q ss_pred hHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHH
Q 012965 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (452)
Q Consensus 136 ~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~ 212 (452)
++.+...+.... .+.|. ++|++..+. .+.. ..+|..+++.+.+.+.++. +|+..|...+.+.++..
T Consensus 314 ~~~~~~~~~~~~-~~~~~~~~~~~g~~~g~----~~~~----~~~g~~ig~~~~g~l~~~~--g~~~~~~~~~~~~~~~~ 382 (392)
T PRK12382 314 AGCSLIFPALGV-EVVKRVPSQVRGTALGG----YAAF----QDIAYGVSGPLAGMLATSF--GYPSVFLAGAISAVLGI 382 (392)
T ss_pred HHHHhHHHHHHH-HHHHhcCHHHHHHHHHH----HHHH----HHHHHHHHHHHHHHHHHHh--CchHHHHHHHHHHHHHH
Confidence 999887776544 54554 334443332 2222 3345555666666666544 45667777666666555
Q ss_pred HHHH
Q 012965 213 VIIL 216 (452)
Q Consensus 213 ~~~~ 216 (452)
....
T Consensus 383 ~~~~ 386 (392)
T PRK12382 383 IVTI 386 (392)
T ss_pred HHHH
Confidence 5444
No 144
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.96 E-value=8.9e-08 Score=88.58 Aligned_cols=163 Identities=25% Similarity=0.287 Sum_probs=105.2
Q ss_pred HHHHHHHHHHhhhhhhhhH-HHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH--HH
Q 012965 42 YLLVYSLMMAGDWLQGPYV-YYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC--IT 118 (452)
Q Consensus 42 ~~~~~~~~~~~~~~~~p~l-~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~--l~ 118 (452)
.+....+.+.+.+....|+ |.+.+..|.|.+.++++....-+.+.+++.+.|+++|| +.|+.+.....+.++.. +.
T Consensus 216 ~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~ 294 (394)
T COG2814 216 GLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALT 294 (394)
T ss_pred HHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444 34456789999999988877777778888999999999 99999998888887764 34
Q ss_pred hcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc--ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCC
Q 012965 119 KHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLG 196 (452)
Q Consensus 119 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~ 196 (452)
...++.+..++.-++.|++.......... -+++. +.++...+. +....++|..+|. .+++.+.++ ++
T Consensus 295 ~~~~~~~~~~~~~~~wg~a~~~~~~~~~~-~~a~~~p~~~~~a~sl----~~aa~nlgia~GA----~lGG~v~~~--~g 363 (394)
T COG2814 295 FTGASPALALALLFLWGFAFSPALQGLQT-RLARLAPDAADLAGSL----NVAAFNLGIALGA----ALGGLVLDA--LG 363 (394)
T ss_pred HhcchHHHHHHHHHHHHHHhhhhhhHHHH-HhcccCCCchHHHHHH----HHHHHHHHHHHHH----HHHHHHHHh--hc
Confidence 55667777777777777776655444323 34442 344444443 3334444444444 445555544 56
Q ss_pred cchhhHHHHHHHHHHHHHHH
Q 012965 197 PVAPFDAAACFLAIGMVIIL 216 (452)
Q Consensus 197 ~~~~f~~~~~~~~~~~~~~~ 216 (452)
+....+..+++.+++..+..
T Consensus 364 ~~~~~~~~a~l~~~a~~~~~ 383 (394)
T COG2814 364 YAATGWVGAALLLLALLLAL 383 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 66777887777777666654
No 145
>PRK09952 shikimate transporter; Provisional
Probab=98.96 E-value=5.5e-08 Score=94.43 Aligned_cols=152 Identities=16% Similarity=0.079 Sum_probs=92.9
Q ss_pred HhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HH--hc-C-ccHHHHHHHHHHHHhHh
Q 012965 64 YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT--KH-S-PQYKILMIGRILGGIAT 138 (452)
Q Consensus 64 ~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~--~~-~-~~~~~l~~~r~l~G~~~ 138 (452)
.+++|.+..+...+.......+.++.++.|+++||+|||+++..+.++..++. .. .. . ++.+.+++..++.+++.
T Consensus 278 ~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 357 (438)
T PRK09952 278 TQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAH 357 (438)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Confidence 46788887655444333444455666789999999999999988876655542 11 11 2 33445555667778887
Q ss_pred hhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHhc
Q 012965 139 SLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSS 218 (452)
Q Consensus 139 ~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 218 (452)
+...+...+ ++.|.-+.+.+.. ..+....++..++..++|.+.+++.+..+.+|+.++...+...++..+... .
T Consensus 358 ~~~~~~~~~-~~~e~~p~~~r~t----g~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~-~ 431 (438)
T PRK09952 358 DMVVCVQQP-MFTEMFGASYRYS----GAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTAL-L 431 (438)
T ss_pred HHHHHHHHH-HHHHHCCcchhHH----HHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHH-H
Confidence 777666544 7777633333222 233334455556777777888877765444567777666666555544443 3
Q ss_pred ccc
Q 012965 219 WTE 221 (452)
Q Consensus 219 ~~~ 221 (452)
.+|
T Consensus 432 ~~~ 434 (438)
T PRK09952 432 MKD 434 (438)
T ss_pred ccc
Confidence 444
No 146
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.95 E-value=2.7e-08 Score=96.17 Aligned_cols=159 Identities=12% Similarity=0.125 Sum_probs=95.5
Q ss_pred HHHHHHHHhhhchhhhhhhhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccC-CCCchhHHHHHHHHHHH
Q 012965 250 ALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARS-PPRVESYMQIVFVVSSV 325 (452)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~ 325 (452)
+.............|. ...++|.|+++..+.+. +...........++.+++|+++||+ |||+. +..+..+..+
T Consensus 12 ~~l~~~~~~e~fs~Yg-~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~--iliG~il~~l 88 (493)
T PRK15462 12 YYVVALQIWEYFSFYG-MRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMA--VMLGALLMAI 88 (493)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHH--HHHHHHHHHH
Confidence 3333333333444444 57889999887777665 4555666677788999999999999 98883 5555555554
Q ss_pred HHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcc--cccchhhhhhhhhh------
Q 012965 326 SLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEE--ARSTIMNFFRIPLN------ 397 (452)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~--~r~~~~g~~~~~~~------ 397 (452)
+...+...... + ....++..+..++.|...+...++..|.+|++ +|.++.++.....+
T Consensus 89 g~lll~~~~~~--~------------~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~ia 154 (493)
T PRK15462 89 GHVVLGASEIH--P------------SFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIA 154 (493)
T ss_pred HHHHHHHhhcc--h------------hHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHH
Confidence 44332211110 0 12334444555677776787889999999986 68888887776533
Q ss_pred HHHHHHHhccccCCchHHHHHHHHHHHHHH
Q 012965 398 IFVCVVLYNVDAFPITVMFGMCSIFLLVAS 427 (452)
Q Consensus 398 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 427 (452)
+.+.+++.+. .++...+..+++..+++.
T Consensus 155 p~l~g~L~~~--~Gw~~~F~iaaigm~l~l 182 (493)
T PRK15462 155 PIACGYAQEE--YSWAMGFGLAAVGMIAGL 182 (493)
T ss_pred HHHHHHHHhh--hChHHHHHHHHHHHHHHH
Confidence 2344444444 345555555544444333
No 147
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.94 E-value=9.7e-11 Score=114.78 Aligned_cols=257 Identities=12% Similarity=0.097 Sum_probs=3.0
Q ss_pred hhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhc----Cc-----
Q 012965 53 DWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKH----SP----- 122 (452)
Q Consensus 53 ~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~----~~----- 122 (452)
.++....+..+.+.|+++.++.|.+.+..-+...+..++..++.+|..|-|.+-.+.++.++++ +.++ .+
T Consensus 19 ~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~ 98 (539)
T PF03137_consen 19 SGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYE 98 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccc
Confidence 3343555567889999999999999888888888888889999999888888888888888875 3231 00
Q ss_pred -----------------------------------------cHHHHHHHHHHHHhHhhhhhhhhhhhhhhhcccccchhh
Q 012965 123 -----------------------------------------QYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQ 161 (452)
Q Consensus 123 -----------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~ 161 (452)
-+..++++.++.|+|....++...+ |+.|..+++...-
T Consensus 99 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~t-YiDDnv~~~~spl 177 (539)
T PF03137_consen 99 EASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGIT-YIDDNVSKKNSPL 177 (539)
T ss_dssp -----------------------------------------------------SSS------------------------
T ss_pred cccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceee-eeccccccccCcc
Confidence 0237788999999999999999977 9999844333332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc--------------cCC--CcchhhHHHHHHHHHHHHHHH---hccccc
Q 012965 162 WLSITFSKAIFLGNGLVAILSGLFGNLLVDS--------------FSL--GPVAPFDAAACFLAIGMVIIL---SSWTEN 222 (452)
Q Consensus 162 ~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~--------------~~~--~~~~~f~~~~~~~~~~~~~~~---~~~~~~ 222 (452)
..+. ......+|.++|.++++.....-.+. ..| .|..-|.+.+.+.++..+.+. +.+|++
T Consensus 178 YiGi-~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~ 256 (539)
T PF03137_consen 178 YIGI-LYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGT 256 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred chhh-hhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCc
Confidence 2222 22233333333333333322221111 011 244555555555554443332 233333
Q ss_pred cCCCC-------cch----h-------------HHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCC
Q 012965 223 YGDPS-------ESK----D-------------LLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPND 278 (452)
Q Consensus 223 ~~~~~-------~~~----~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 278 (452)
++.++ +.+ + ..++..+..+.+++||.+....+..........+ ..++.|.|++.+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G-~~tF~pKylE~Q 335 (539)
T PF03137_consen 257 SERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSG-FATFLPKYLESQ 335 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 10000 000 0 0111122345567777777776666655555444 588999999999
Q ss_pred CCCchHHHH---HHHH-HHHHHHhHHHHHHhccCCCCc
Q 012965 279 EEIPHGFIF---ATFM-LASMLGSSLASRLMARSPPRV 312 (452)
Q Consensus 279 ~~~~~~~~~---~~~~-i~~~~~~~~~g~l~dr~g~~~ 312 (452)
++.+++... .... .+.++|.+++|++.+|++-+.
T Consensus 336 F~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~ 373 (539)
T PF03137_consen 336 FGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSA 373 (539)
T ss_dssp --------------------------------------
T ss_pred hCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcH
Confidence 988764332 2222 357788999999999985443
No 148
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.94 E-value=3.7e-08 Score=95.58 Aligned_cols=110 Identities=15% Similarity=0.194 Sum_probs=80.0
Q ss_pred hhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCC
Q 012965 268 FLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKS 344 (452)
Q Consensus 268 ~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (452)
..+.|.+.++ .+.+. +...+...++..+++++.|++.||+|||+ .+..+..+.++...........
T Consensus 43 ~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~--~~~~~~~~~~~~~~~~~~~~~~-------- 111 (434)
T PRK11663 43 NAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARY--FMGIGLIATGIINILFGFSSSL-------- 111 (434)
T ss_pred HHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCch--hHHHHHHHHHHHHHHHHHHhHH--------
Confidence 5566766654 55544 67777888899999999999999999987 3555555555554443332222
Q ss_pred CCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 345 GGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
+...+..++.+++.+..++....++.|.+|+++|++++|+.+..
T Consensus 112 -------~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~ 155 (434)
T PRK11663 112 -------WAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTA 155 (434)
T ss_pred -------HHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 24455566778888888899999999999999999999887764
No 149
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.94 E-value=6.7e-08 Score=92.45 Aligned_cols=150 Identities=14% Similarity=0.080 Sum_probs=87.5
Q ss_pred hhhhhhhHHHHHhhcCCCcchhHHHHHHHHh-hhhhccccccccccccCcchHHHHHHHHHHHHH-HH-h-----cCccH
Q 012965 53 DWLQGPYVYYLYSTYGFGKGEIGQLFIAGFG-SSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT-K-----HSPQY 124 (452)
Q Consensus 53 ~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~-~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~-~-----~~~~~ 124 (452)
......+.+...+|.|++++++|.+...... ...++..+.|++.||+|+|+.+..+..+.++.. .. . ..++.
T Consensus 224 ~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (390)
T TIGR02718 224 AVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGI 303 (390)
T ss_pred HHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcH
Confidence 3333344555667789999999988766543 333455679999999999999988776653322 11 1 12344
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhhhhhhc-c---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchh
Q 012965 125 KILMIGRILGGIATSLLFSAFESWLVAEH-N---KRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAP 200 (452)
Q Consensus 125 ~~l~~~r~l~G~~~~~~~~~~~~~~i~e~-~---~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~ 200 (452)
+.+.....+.++..+...+...+ ...+. . .++...+. .+... .+|..+++.+++.+.+.. +++..
T Consensus 304 ~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~g~~~~~----~~~~~----~lg~~~g~~~~G~l~~~~--G~~~~ 372 (390)
T TIGR02718 304 AVAWSCSAFGSLITGITSVAIYT-AFMRFAGDGDQAGTDVTA----VQSTR----DLGELIASSIAGYLTDRF--GYAGG 372 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCcccchHHHHHH----HHHHH----HHHHHHHHHHHHHHHHHH--ccHHH
Confidence 44455555666666666555544 33333 2 22333332 22222 355566666666666544 45667
Q ss_pred hHHHHHHHHHHHH
Q 012965 201 FDAAACFLAIGMV 213 (452)
Q Consensus 201 f~~~~~~~~~~~~ 213 (452)
|...+++.++...
T Consensus 373 f~~~~~~~l~a~~ 385 (390)
T TIGR02718 373 FLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHH
Confidence 7776666555443
No 150
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.92 E-value=6.9e-08 Score=90.67 Aligned_cols=148 Identities=23% Similarity=0.288 Sum_probs=108.5
Q ss_pred hhhHHHHHhhc-CCCcchhHHHHHHHHhhhhhccccccccccccCcch-HHHHHHHHHHHHH-HHhcCccHHHHHHHHHH
Q 012965 57 GPYVYYLYSTY-GFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKR-ACVTYCLTYILSC-ITKHSPQYKILMIGRIL 133 (452)
Q Consensus 57 ~p~l~~i~~~~-g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~-~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l 133 (452)
....+...++. |.++.+.+.......+...++.++.|++.||+|||+ .+..+..+..++. .....++.+...+..++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 274 (352)
T cd06174 195 LTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLL 274 (352)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 45556666554 899999998888888888888899999999999999 9999988888876 56778889999999999
Q ss_pred HHhHhhhhhhhhhhhhhhhcc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHH
Q 012965 134 GGIATSLLFSAFESWLVAEHN---KRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAI 210 (452)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~e~~---~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~ 210 (452)
.|++.+...+.... ++.|.. +|++..+ ..+. ...++..+++.+.+.+.+. .+|+..+.+.+++.++
T Consensus 275 ~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~----~~~~~~~i~~~i~g~l~~~--~~~~~~~~~~~~~~~i 343 (352)
T cd06174 275 LGFGLGFAFPALLT-LASELAPPEARGTASG----LFNT----FGSLGGALGPLLAGLLLDT--GGYGGVFLILAALALL 343 (352)
T ss_pred HHHHHhccchhHHH-HHHhhcCHHHHHHHHH----HHHH----HHHHHHHHHHHHHHHHhcc--cCcchHHHHHHHHHHH
Confidence 99999999888756 777663 3333333 2222 2345556666666666643 4566777777777666
Q ss_pred HHHHH
Q 012965 211 GMVII 215 (452)
Q Consensus 211 ~~~~~ 215 (452)
..+..
T Consensus 344 ~~i~~ 348 (352)
T cd06174 344 AALLL 348 (352)
T ss_pred HHHHh
Confidence 55443
No 151
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.91 E-value=2e-07 Score=88.97 Aligned_cols=143 Identities=13% Similarity=0.050 Sum_probs=90.3
Q ss_pred HHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HH-hcCccHHHHHHHHHHHHhHhh
Q 012965 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT-KHSPQYKILMIGRILGGIATS 139 (452)
Q Consensus 62 ~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~-~~~~~~~~l~~~r~l~G~~~~ 139 (452)
.+.+.+|.++.+.+...+...+...++.++.|++.||+|+|+.+..+..+.+++. +. ...++.+...+..++.+.+..
T Consensus 225 ~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~ 304 (382)
T PRK10091 225 YMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLF 304 (382)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 4445689999999988888777788888999999999999999998888877765 33 345566666666677777665
Q ss_pred hhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHH
Q 012965 140 LLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (452)
Q Consensus 140 ~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~ 212 (452)
...+........+. .+++..+.. .. .....+|..++|.+++.+.+. .++|+..+...+++.++..
T Consensus 305 ~~~~~~~~~~~~~~-~~~~~~~~~--~~----~~~~~~g~~~Gp~~~G~l~~~-~~~~~~~~~~~~~~~~~~~ 369 (382)
T PRK10091 305 ALSAPLQILLLQNA-KGGELLGAA--GG----QIAFNLGSAIGAYCGGMMLTL-GLAYNYVALPAALLSFAAM 369 (382)
T ss_pred hhhHHHHHHHHHhC-CcchHHHHH--HH----HHHHHHHHHHHHHHhHHHHHc-ccCcchHHHHHHHHHHHHH
Confidence 55444333233332 222222211 01 123446667777777777763 2345566666555444433
No 152
>PRK10504 putative transporter; Provisional
Probab=98.90 E-value=8.5e-08 Score=94.23 Aligned_cols=121 Identities=22% Similarity=0.242 Sum_probs=78.0
Q ss_pred HHHHHh-hcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhc---CccHHHHHHHHHHH
Q 012965 60 VYYLYS-TYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKH---SPQYKILMIGRILG 134 (452)
Q Consensus 60 l~~i~~-~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~---~~~~~~l~~~r~l~ 134 (452)
.|...+ .+|.++.+.+.......+...+..++.|++.||+|||+++..+..+.+++. +..+ .++.+.+.+..++.
T Consensus 284 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (471)
T PRK10504 284 TPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQ 363 (471)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHH
Confidence 344444 588898888877766666566666889999999999999998888777754 3333 23444455567788
Q ss_pred HhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 012965 135 GIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLF 185 (452)
Q Consensus 135 G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l 185 (452)
|++.+...+.... +..+. +.++...+.. +....+|..+|+.+++.+
T Consensus 364 g~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~----~~~~~~g~~ig~~i~g~l 412 (471)
T PRK10504 364 GMVNSTRFSSMNT-LTLKDLPDNLASSGNSLL----SMIMQLSMSIGVTIAGLL 412 (471)
T ss_pred HHHHHHHHHHHHH-HHHHcCCHHhccchHHHH----HHHHHHHHHHHHHHHHHH
Confidence 8888877776644 44443 4455554433 333444444555444433
No 153
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.90 E-value=7.6e-08 Score=92.30 Aligned_cols=138 Identities=12% Similarity=0.111 Sum_probs=93.2
Q ss_pred CCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHHhHhhhhhhhhh
Q 012965 68 GFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFE 146 (452)
Q Consensus 68 g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 146 (452)
+.+..+.|...+...+...+..+..|++.||+|||+.+..+..+.+++. +...++|.+.+++.+++.|++.........
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555667777777766666777789999999999999999988888875 447788999899999999988765544332
Q ss_pred hhhhhhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHH
Q 012965 147 SWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMV 213 (452)
Q Consensus 147 ~~~i~e~-~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~ 213 (452)
. +..+. ++|..... .+.+......+|..+++.+++++.+.. +++..|.+.+++.++...
T Consensus 330 ~-~~~~~~~~~~~at~-----~~~~~~~~~~lg~~~~~~l~G~l~~~~--G~~~~f~~~~~~~~i~~~ 389 (396)
T TIGR00882 330 K-YITSQFDVRLSATI-----YLIGFQFAKQLAMIFLSTLAGNMYDSI--GFQGAYLVLGCIVLLFTL 389 (396)
T ss_pred H-HHHHhCCcceEEEe-----ehHHHHHHHHHHHHHHHHhHHHHHHhc--ccHHHHHHHHHHHHHHHH
Confidence 3 44433 33332211 111222345567777777888877644 567778777666655443
No 154
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.89 E-value=3.3e-08 Score=94.75 Aligned_cols=136 Identities=8% Similarity=0.057 Sum_probs=91.3
Q ss_pred hhhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcC
Q 012965 267 VFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVK 343 (452)
Q Consensus 267 ~~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (452)
...+.|.++++..+.+. |...+...+...+.+++.|+++||+|||+ .+..+.....+.........+.
T Consensus 29 ~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~--~l~~~~~~~~~~~~~~~~~~~~------- 99 (400)
T PRK11646 29 VFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKP--MIVTGMLMRAAGFATMAIAHEP------- 99 (400)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchH--HHHHHHHHHHHHHHHHHHhccH-------
Confidence 45667777766666655 56666667777888899999999999887 3555555555544443322211
Q ss_pred CCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh------hhHHHHHHHhccccCCchHHHH
Q 012965 344 SGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFG 417 (452)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~ 417 (452)
+...+...+.+++.+...|...+++.|.+|+++|++++|+.+.. .++.+++.+. . +++...+.
T Consensus 100 --------~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~--~g~~~~f~ 168 (400)
T PRK11646 100 --------WLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-Q--YDFRLVCA 168 (400)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H--hhHHHHHH
Confidence 35566677778888877888999999999999999999887664 3445555555 2 34444444
Q ss_pred HHHHH
Q 012965 418 MCSIF 422 (452)
Q Consensus 418 ~~~~~ 422 (452)
..++.
T Consensus 169 ~~~~~ 173 (400)
T PRK11646 169 TGAVL 173 (400)
T ss_pred HHHHH
Confidence 44433
No 155
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.89 E-value=3.5e-08 Score=94.13 Aligned_cols=108 Identities=15% Similarity=0.071 Sum_probs=77.7
Q ss_pred hccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCC
Q 012965 270 WTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGG 346 (452)
Q Consensus 270 ~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (452)
..|.+. ++.+.+. +...+...++..++.++.|++.||+|||+ .+..+..+..+...........
T Consensus 27 ~~p~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~--~~~~~~~~~~~~~~~~~~~~~~---------- 93 (385)
T TIGR00710 27 AFPEIA-ADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRP--VLLLGLFIFALSSLGLALSNNI---------- 93 (385)
T ss_pred cHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChH--HHHHHHHHHHHHHHHHHHHccH----------
Confidence 344443 3355544 67777788899999999999999999987 3555544444444443332222
Q ss_pred cccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 347 ISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 347 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
+...+..++.+++.+...+...++..|.+|+++|++.+|..+..
T Consensus 94 -----~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (385)
T TIGR00710 94 -----ETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPV 137 (385)
T ss_pred -----HHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 35566778888888888899999999999999999998887664
No 156
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.87 E-value=2.1e-06 Score=81.34 Aligned_cols=311 Identities=15% Similarity=0.065 Sum_probs=159.4
Q ss_pred HHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhccccc
Q 012965 78 FIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRG 157 (452)
Q Consensus 78 ~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~~~r~ 157 (452)
..+.|..-.+.+.+.+.+.|+.|.|+.+.++...+..--+.-+-+|-+.++.+-.+.|+|.+..+..-.. +++|+..|.
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N~y~~yfssallG~Gaallw~GqG~-ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPNSYYLYFSSALLGFGAALLWTGQGG-YLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcchHHHHHHHHHhhhhHHheecccce-ehhhcCChh
Confidence 4455555556777899999999999999999998887655556677888999999999999998877655 888885555
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccc---CCCcc-h----------hhHHHHHHHHHHHHHHH--hcccc
Q 012965 158 FEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF---SLGPV-A----------PFDAAACFLAIGMVIIL--SSWTE 221 (452)
Q Consensus 158 ~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~---~~~~~-~----------~f~~~~~~~~~~~~~~~--~~~~~ 221 (452)
..-+..+..++.+.. +..+|+++--.+... .+.. .-+.+ . ...+..++..+..+... .+.|.
T Consensus 135 tie~Nisi~Wai~~~-~li~Ggi~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~ 212 (461)
T KOG3098|consen 135 TIERNISIFWAIGQS-SLIIGGIILFIYFQF-SSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPS 212 (461)
T ss_pred hHHHHHHHHHHHHHH-HHHhhhHhheeeeEe-cccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCc
Confidence 555444444443222 222222221111110 0000 00110 0 01111111111111111 12222
Q ss_pred ccCCC-Ccch-hHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhcccccc--CCCCCch----HHHHHHHHHH
Q 012965 222 NYGDP-SESK-DLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSP--NDEEIPH----GFIFATFMLA 293 (452)
Q Consensus 222 ~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~----~~~~~~~~i~ 293 (452)
+.... .+.. ....+..+..-+..++++.+.+..... ..+....+.....|.-.. ...+.+. +......+++
T Consensus 213 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ml~L~~~f~-~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g 291 (461)
T KOG3098|consen 213 KDVVNCKSSSETSFSELLKLTFKLLKTPKMLLLFPFFF-YTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLG 291 (461)
T ss_pred cchhhhhhhccccHHHHHHHHHHHhcCHhHHHHHHHHH-HHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHH
Confidence 11110 1111 011111222334456666655543332 222223333444454332 1222222 3333444566
Q ss_pred HHHHhHHHHHHhcc---CCCCchhHHHHHHHHHHHHHHHHHHHhhhcC---CCCcCCCCcccchhhHHHHHHHHHHHhhc
Q 012965 294 SMLGSSLASRLMAR---SPPRVESYMQIVFVVSSVSLLLPIVTSFLVA---PSNVKSGGISFSGSLQLLGFCTFEACVGI 367 (452)
Q Consensus 294 ~~~~~~~~g~l~dr---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 367 (452)
.+.+....+.+.|| +|+++. +..+..+....+.+......... ++++++..+........+...+.|++...
T Consensus 292 ~v~~g~~~~~l~~rir~fg~~~~--~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~ 369 (461)
T KOG3098|consen 292 EVIGGLDFSILSKRIRGFGRKPT--VLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDAC 369 (461)
T ss_pred HHHHHHHHHHHhhhhhhcccCcc--hhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHH
Confidence 77777777777765 465652 44444443333333322222211 11111112222234667778889999998
Q ss_pred hhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 368 FWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 368 ~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
.+...+..+.+.+|+ .|..+.++..+-
T Consensus 370 ~~t~~~~ii~~~~~~-~~~~~fsi~kfy 396 (461)
T KOG3098|consen 370 FNTQRYVIIALLYPD-DRAQAFSLFKFY 396 (461)
T ss_pred HHHHHHHHHHHHhcC-chHHHHHHHHHH
Confidence 889999999999954 577777666653
No 157
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.87 E-value=5e-08 Score=95.54 Aligned_cols=161 Identities=12% Similarity=0.133 Sum_probs=99.6
Q ss_pred cchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCchH---HHHHHHHHHHHHHhHHHHHHhcc-CCCCchhHHHHHH
Q 012965 245 SDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHG---FIFATFMLASMLGSSLASRLMAR-SPPRVESYMQIVF 320 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~g~l~dr-~g~~~~~~~~~~~ 320 (452)
++|+-....+...+.....|+....+++.|+++..|.+.. .....+........+++|+++|| +|||+. +..+.
T Consensus 11 ~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~--~~~g~ 88 (489)
T PRK10207 11 QQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRT--IVLGA 88 (489)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHH--HHHHH
Confidence 3444444443333444333444577788888777776653 34444555566667799999999 999983 55666
Q ss_pred HHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCccc--ccchhhhhhhhh--
Q 012965 321 VVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA--RSTIMNFFRIPL-- 396 (452)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~--r~~~~g~~~~~~-- 396 (452)
.+..++.......... + ....++..+.+++.+...|...+++.|.+|+++ |+++++...+..
T Consensus 89 ~~~~~g~~~~~~~~~~---~-----------~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~ni 154 (489)
T PRK10207 89 IVLAIGYFMTGMSLLK---P-----------DLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINI 154 (489)
T ss_pred HHHHHHHHHHHHhccc---h-----------hHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHH
Confidence 5555555444332211 0 134466777889999888999999999998874 466666666543
Q ss_pred ----hHHHHHHHhccccCCchHHHHHHHHHH
Q 012965 397 ----NIFVCVVLYNVDAFPITVMFGMCSIFL 423 (452)
Q Consensus 397 ----~~~~~~~l~~~~~~~~~~~~~~~~~~~ 423 (452)
++.+++++.+.. ++...|.++.+..
T Consensus 155 g~~~g~~l~g~l~~~~--gw~~~F~i~~i~~ 183 (489)
T PRK10207 155 GSLISLSLAPVIADKF--GYSVTYNLCGAGL 183 (489)
T ss_pred HHHHHHHHHHHHHHhh--ChHHHHHHHHHHH
Confidence 334556666554 4455555544333
No 158
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.86 E-value=3e-08 Score=93.30 Aligned_cols=111 Identities=22% Similarity=0.272 Sum_probs=80.6
Q ss_pred hhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCC
Q 012965 268 FLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKS 344 (452)
Q Consensus 268 ~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (452)
....|.+..+.++.+. +...+...++..++.++.|+++||+|||+ .+..+..+..+......+..+.
T Consensus 16 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~--~l~~~~~~~~~~~~~~~~~~~~-------- 85 (352)
T PF07690_consen 16 SPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRR--VLIIGLLLFALGSLLLAFASNF-------- 85 (352)
T ss_dssp HHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHH--HHHHHHHHHHHHHHHHHHHCCH--------
T ss_pred HHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCee--eEeehhhhhhhHHHHhhhhhhH--------
Confidence 3445534444455433 77788888999999999999999999887 3555555555553333322222
Q ss_pred CCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 345 GGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
+..++..++.|++.+...+....++.|.+|+++|++.+|..+..
T Consensus 86 -------~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 129 (352)
T PF07690_consen 86 -------WLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAG 129 (352)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHH
T ss_pred -------HHHhhhccccccccccccccccccccccchhhhhhhccccccch
Confidence 36677888999999999999999999999999999999887764
No 159
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.86 E-value=3.2e-08 Score=94.55 Aligned_cols=130 Identities=13% Similarity=0.164 Sum_probs=87.9
Q ss_pred hhhHHHHH-hhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHH-HH--HHhc--CccHHHHHHH
Q 012965 57 GPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL-SC--ITKH--SPQYKILMIG 130 (452)
Q Consensus 57 ~p~l~~i~-~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i-~~--l~~~--~~~~~~l~~~ 130 (452)
..++|... +++|.+..+.+.......+...+..++.|+++||+|||+.+.....+..+ +. +..+ .++.+.+...
T Consensus 239 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (394)
T TIGR00883 239 TTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFL 318 (394)
T ss_pred HHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHH
Confidence 45555665 67899998888887777777778888999999999999988765554433 31 2222 3567777788
Q ss_pred HHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccC
Q 012965 131 RILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS 194 (452)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~ 194 (452)
.++.|++.+...+...+ ++.|. ++|++..+. ....+..+|..++|.+++.+.++.+
T Consensus 319 ~~~~g~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~-------~~~~~~~~g~~~~p~~~g~l~~~~g 377 (394)
T TIGR00883 319 VLGLALIGGMYTGPMGS-FLPELFPTEVRYTGASL-------AYNLAGAIFGGFAPYIAAALVAMTG 377 (394)
T ss_pred HHHHHHHHHHHhhhHHH-HHHHhCCccceeeEeee-------hhHhHHHHHhhHHHHHHHHHHHHcC
Confidence 88999988888777755 77776 334443332 1223344566666777777776554
No 160
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.86 E-value=7.3e-08 Score=92.21 Aligned_cols=135 Identities=15% Similarity=0.225 Sum_probs=91.1
Q ss_pred hccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCC
Q 012965 270 WTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGG 346 (452)
Q Consensus 270 ~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (452)
..|.+.+ ..+.+. +...+...++..+++++.|++.||+|||+ .+..+..+.++.........+.
T Consensus 42 ~l~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~--~~~~~~~~~~~~~~~~~~~~~~---------- 108 (394)
T PRK10213 42 LLTPMAQ-DLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRY--VVILFAVLLTLSCLLVSFANSF---------- 108 (394)
T ss_pred hHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHH--HHHHHHHHHHHHHHHHHHHChH----------
Confidence 4555444 345544 56667778889999999999999999988 3555555555544443332222
Q ss_pred cccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh------hhHHHHHHHhccccCCchHHHHHHH
Q 012965 347 ISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGMCS 420 (452)
Q Consensus 347 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~ 420 (452)
+..++.-.+.|++.+...|...+++.|.+|+++|+++.+..... .++.+++.+.+. .++...+...+
T Consensus 109 -----~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~--~gw~~~f~~~~ 181 (394)
T PRK10213 109 -----SLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGEL--IGWRNVFNAAA 181 (394)
T ss_pred -----HHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cCHHHHHHHHH
Confidence 46677778889999988899999999999999999998876653 233445555554 34444444444
Q ss_pred HHHH
Q 012965 421 IFLL 424 (452)
Q Consensus 421 ~~~~ 424 (452)
+..+
T Consensus 182 ~l~~ 185 (394)
T PRK10213 182 VMGV 185 (394)
T ss_pred HHHH
Confidence 3333
No 161
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.85 E-value=2.6e-08 Score=95.71 Aligned_cols=110 Identities=11% Similarity=0.042 Sum_probs=79.3
Q ss_pred hhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCC
Q 012965 268 FLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKS 344 (452)
Q Consensus 268 ~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (452)
....|.+. +.++.+. +...+...++..++.++.|+++||+|||+. +..+..+..+......+....
T Consensus 32 ~~~~~~l~-~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~--~~~~~~~~~~~~~~~~~~~~~-------- 100 (405)
T TIGR00891 32 ALVLAEVA-GEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLP--MVTSIVLFSAGTLACGFAPGY-------- 100 (405)
T ss_pred HHHHHHHH-HHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH--HHHHHHHHHHHHHHHHHhccH--------
Confidence 34445443 3345443 677778889999999999999999999983 444544444444443332222
Q ss_pred CCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 345 GGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
+..++..++.|++.+...+...+++.|.+|+++|+++.++.+..
T Consensus 101 -------~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 144 (405)
T TIGR00891 101 -------ITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISG 144 (405)
T ss_pred -------HHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHH
Confidence 35667788889999988899999999999999999999887764
No 162
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.85 E-value=8.7e-08 Score=92.25 Aligned_cols=110 Identities=14% Similarity=0.095 Sum_probs=81.0
Q ss_pred hhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCC
Q 012965 268 FLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKS 344 (452)
Q Consensus 268 ~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (452)
....| .++++++.+. +...+...++..+++++.|++.||+|||+ .+..+..+.++......+..+.
T Consensus 28 ~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~--~~~~~~~~~~~~~~~~~~~~~~-------- 96 (412)
T TIGR02332 28 GFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARR--WIAGIMVLWGIASTATMFATGP-------- 96 (412)
T ss_pred HHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHH--HHHHHHHHHHHHHHHHHHhcCH--------
Confidence 34445 4455566654 66777888899999999999999999998 3555555555544444332222
Q ss_pred CCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 345 GGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
+...+.-++.|++.+...|....++.|.+|+++|++++|+.+..
T Consensus 97 -------~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~ 140 (412)
T TIGR02332 97 -------ESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIA 140 (412)
T ss_pred -------HHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 35667778889999988898889999999999999999888764
No 163
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.84 E-value=1.7e-07 Score=85.97 Aligned_cols=111 Identities=19% Similarity=0.272 Sum_probs=88.9
Q ss_pred hhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCC
Q 012965 268 FLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKS 344 (452)
Q Consensus 268 ~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (452)
..-.|...++. +.+. |.+.+...+..-++..+.|.++||.+.|. .+..+..+.++..++..+....
T Consensus 49 ~~a~p~l~e~~-~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~--fm~~gLilsai~nil~Gfs~s~-------- 117 (448)
T COG2271 49 NLAMPALIEDG-GLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRY--FMAFGLILSAIVNILFGFSPSL-------- 117 (448)
T ss_pred hhccHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCce--eehHHHHHHHHHHHHHhhhhHH--------
Confidence 33455555543 3433 78888889999999999999999999887 3666777777777776665544
Q ss_pred CCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhhh
Q 012965 345 GGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPL 396 (452)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~ 396 (452)
+...+...+.|...|..+|.....+...+|+++||+..|+-|.+-
T Consensus 118 -------~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~sh 162 (448)
T COG2271 118 -------FLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSH 162 (448)
T ss_pred -------HHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhh
Confidence 477788889999999999999999999999999999999988863
No 164
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.84 E-value=7.6e-08 Score=94.35 Aligned_cols=151 Identities=11% Similarity=-0.009 Sum_probs=91.0
Q ss_pred hHHH-HHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-H--HhcCccHHHHHHHHHHH
Q 012965 59 YVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-I--TKHSPQYKILMIGRILG 134 (452)
Q Consensus 59 ~l~~-i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l--~~~~~~~~~l~~~r~l~ 134 (452)
.+|. +.+++|+|..+.+.......+.+.++.++.|+++||+|||+.+.....+..++. + ....++.+...+.+++.
T Consensus 280 ~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (467)
T PRK09556 280 WSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFAL 359 (467)
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 3443 446799999998888777777777888999999999999988776554444332 2 23456676777888888
Q ss_pred HhHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc----------cCCCcchhhHHH
Q 012965 135 GIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS----------FSLGPVAPFDAA 204 (452)
Q Consensus 135 G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~----------~~~~~~~~f~~~ 204 (452)
|+........... ...|.-+++.+.. ..+.....++..|..++|.+.+.+.+. ...+|+..|.+.
T Consensus 360 G~~~~~~~~~~~~-~~~~~~p~~~~g~----a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~ 434 (467)
T PRK09556 360 GFLVFGPQLLIGV-AAVGFVPKKAIGV----ANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAAL 434 (467)
T ss_pred HHHHhhHHHHHHH-HHHhhcchhhHHH----HHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHH
Confidence 8654332222112 4445533322222 222233334434656777777777761 023567777766
Q ss_pred HHHHHHHHHH
Q 012965 205 ACFLAIGMVI 214 (452)
Q Consensus 205 ~~~~~~~~~~ 214 (452)
.+..+++.+.
T Consensus 435 ~~~~~~~~~~ 444 (467)
T PRK09556 435 DIAAIGCICL 444 (467)
T ss_pred HHHHHHHHHH
Confidence 5555554433
No 165
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.83 E-value=2.3e-07 Score=91.28 Aligned_cols=147 Identities=15% Similarity=0.203 Sum_probs=86.2
Q ss_pred HHHhhcCCCcchhHHHH-HHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH----HHhcC-ccHHHHHHHHHHHH
Q 012965 62 YLYSTYGFGKGEIGQLF-IAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC----ITKHS-PQYKILMIGRILGG 135 (452)
Q Consensus 62 ~i~~~~g~s~~~~g~~~-~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~----l~~~~-~~~~~l~~~r~l~G 135 (452)
.+.+++|.|..+.+... ....+...++.++.|+++||+|+|+.+..+.++.+++. ..+.. ++.+.+...-++..
T Consensus 248 ~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~ 327 (491)
T PRK11010 248 FLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFEN 327 (491)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 34467899999999876 45556677777889999999999998877666554432 12333 45555555556644
Q ss_pred hHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHHH
Q 012965 136 IATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVII 215 (452)
Q Consensus 136 ~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~ 215 (452)
+..+...+...+ +..+..++....... ...+. ...+|..+++.+.+.+.+.. +|+..|.+.+++.+...+..
T Consensus 328 ~~~g~~~~~~~a-~~~~l~~~~~~~t~~-gl~~s----~~~lg~~~~~~~~G~l~~~~--G~~~~f~~~~~~~l~~l~~~ 399 (491)
T PRK11010 328 LCGGMGTAAFVA-LLMTLCNKSFSATQF-ALLSA----LSAVGRVYVGPVAGWFVEAH--GWPTFYLFSVAAAVPGLLLL 399 (491)
T ss_pred HHHHHHHHHHHH-HHHHHcCCCCcHHHH-HHHHH----HHHHHHHHHHHHHHHHHHHh--ChHHHHHHHHHHHHHHHHHH
Confidence 444444443333 444442222222211 12221 23455556666777777644 56677777666666655444
Q ss_pred H
Q 012965 216 L 216 (452)
Q Consensus 216 ~ 216 (452)
.
T Consensus 400 ~ 400 (491)
T PRK11010 400 L 400 (491)
T ss_pred H
Confidence 3
No 166
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.83 E-value=7.4e-08 Score=97.79 Aligned_cols=95 Identities=13% Similarity=0.151 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHH
Q 012965 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (452)
Q Consensus 284 ~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 363 (452)
+.+.+...++.+++.++.|+++||+|||+. +..+..+.+++.++..+.... +.++++-++.|+
T Consensus 205 g~l~s~~~lG~iiG~li~G~LsDR~GRR~~--lii~lil~~i~~ll~afa~s~---------------~~llv~R~l~G~ 267 (742)
T TIGR01299 205 GMLGLIVYLGMMVGAFFWGGLADKLGRKQC--LLICLSVNGFFAFFSSFVQGY---------------GFFLFCRLLSGF 267 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcHHH--HHHHHHHHHHHHHHHHHHhhH---------------HHHHHHHHHHHH
Confidence 567777889999999999999999999983 444444444444443332222 356777888999
Q ss_pred HhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 364 CVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
+.+...|...+++.|.+|++.|++.++..+..
T Consensus 268 g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~ 299 (742)
T TIGR01299 268 GIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMF 299 (742)
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999998876653
No 167
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.83 E-value=8.9e-08 Score=93.14 Aligned_cols=83 Identities=17% Similarity=0.155 Sum_probs=61.8
Q ss_pred CcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcC-ccHHHHHHHHHHHHhHhhhhhhhhhh
Q 012965 70 GKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS-PQYKILMIGRILGGIATSLLFSAFES 147 (452)
Q Consensus 70 s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~ 147 (452)
++.+.+.+.....+...++.+++++++||+|||+++..+..+.+++. ...+. ++.+.+.+..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556666666667677888889999999999999999988877765 33333 46677778888899998888777655
Q ss_pred hhhhhc
Q 012965 148 WLVAEH 153 (452)
Q Consensus 148 ~~i~e~ 153 (452)
+++|.
T Consensus 335 -~~~~~ 339 (437)
T TIGR00792 335 -LVADT 339 (437)
T ss_pred -HHhhh
Confidence 55543
No 168
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.83 E-value=3.9e-07 Score=86.58 Aligned_cols=165 Identities=16% Similarity=0.222 Sum_probs=106.2
Q ss_pred hhhhhhhhHHHHHhhcC-CCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcC-ccHHHHH
Q 012965 52 GDWLQGPYVYYLYSTYG-FGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS-PQYKILM 128 (452)
Q Consensus 52 ~~~~~~p~l~~i~~~~g-~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~-~~~~~l~ 128 (452)
.......+.+...+|.| .+....|.+.+.+.+.-...-...+++..|+|.|+++.++.+.+++=. +.+.. ++.+...
T Consensus 222 ~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~ 301 (400)
T PF03825_consen 222 SHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIV 301 (400)
T ss_pred HHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence 33333344444557777 666777766565555444444468999999999999999999999854 55554 5554433
Q ss_pred ----HHHHHHHhHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCC----Ccchh
Q 012965 129 ----IGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSL----GPVAP 200 (452)
Q Consensus 129 ----~~r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~----~~~~~ 200 (452)
+...+.|+..+..+.+... ++.+..+++.+.+ .++.......++|..++..+++++.++.+- +|...
T Consensus 302 ~~~~l~q~lhG~tf~~~~~a~~~-yi~~~~p~~~~at----~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~ 376 (400)
T PF03825_consen 302 ALQLLGQLLHGLTFGLFHAASVR-YIDRIAPPELRAT----AQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAV 376 (400)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHH-HHHHhCCccchHH----HHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHH
Confidence 3355799999999988866 8888755555544 233344455667778888888888776543 34445
Q ss_pred hHHHHHHHHHHHHHHHhcccc
Q 012965 201 FDAAACFLAIGMVIILSSWTE 221 (452)
Q Consensus 201 f~~~~~~~~~~~~~~~~~~~~ 221 (452)
+.+.+++.++..++.....+|
T Consensus 377 ~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 377 FLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHHHHHHHHHHHHHhhccC
Confidence 555555555544444434443
No 169
>PRK15075 citrate-proton symporter; Provisional
Probab=98.83 E-value=2.2e-07 Score=90.23 Aligned_cols=134 Identities=13% Similarity=0.107 Sum_probs=80.9
Q ss_pred hhhHHHHHh-hcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHH-HH-H---HhcCccHHHHHHH
Q 012965 57 GPYVYYLYS-TYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL-SC-I---TKHSPQYKILMIG 130 (452)
Q Consensus 57 ~p~l~~i~~-~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i-~~-l---~~~~~~~~~l~~~ 130 (452)
..+.|...+ .+|.+..+.+.......+.+.++.++.|+++||+|||+++..+..+..+ .. . ....+++......
T Consensus 258 ~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (434)
T PRK15075 258 TVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAV 337 (434)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHH
Confidence 444566655 4799988888776666666777788899999999999998876544432 21 1 1123444444455
Q ss_pred HHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcc
Q 012965 131 RILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPV 198 (452)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~ 198 (452)
.++.|++.+...+...+ ++.|. +.|+...+ .....+..++..++|.+.+.+.++.+++|.
T Consensus 338 ~~~~~~~~g~~~~~~~~-~~~e~~p~~~rg~~~g-------~~~~~~~~~~g~~~p~~~g~i~~~~g~~~~ 400 (434)
T PRK15075 338 ELWLSFLYGSYNGAMVV-ALTEVMPAEVRTAGFS-------LAYSLATAIFGGFTPAISTWLIHVTGDKAA 400 (434)
T ss_pred HHHHHHHHHHHHhhHHH-HHHHHCCCCccchhee-------HHHHHHHHHHhhhHHHHHHHHHHhcCCchH
Confidence 55666666665554434 56665 33444322 222334444445566777777766665443
No 170
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.83 E-value=1.4e-07 Score=86.53 Aligned_cols=200 Identities=16% Similarity=0.204 Sum_probs=113.3
Q ss_pred hhHHHHHHHHHHHHHhhccccccCCC-CCCc-------cchhhHHHHHHHHHHHHhhhhh-hhhHHHHH-hhcCCCcchh
Q 012965 5 FYLVFGALGAVVAALELSKTNKDRIN-TSSA-------FNSFKNNYLLVYSLMMAGDWLQ-GPYVYYLY-STYGFGKGEI 74 (452)
Q Consensus 5 ~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~~-~p~l~~i~-~~~g~s~~~~ 74 (452)
.|++...+..++..+.+...++.+.. ++.. .+..+.+.+.......++.... +..+|... ++|+.++.+.
T Consensus 177 i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~A 256 (417)
T COG2223 177 IYVVALAIAAVLAWLGMNDVPEHRASVKPQLPAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTA 256 (417)
T ss_pred HHHHHHHHHHHHHHHHhCCChhhhccccccchhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhH
Confidence 35555555566666666554442222 1111 1122223333334444444443 44444444 6899999999
Q ss_pred HHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcC-------ccHH----HHHHHHHHHHhHhhhhh
Q 012965 75 GQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS-------PQYK----ILMIGRILGGIATSLLF 142 (452)
Q Consensus 75 g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~-------~~~~----~l~~~r~l~G~~~~~~~ 142 (452)
|...+.....+.+..|.+|+++||+|.+|++......++++. +..+. ++.. .++...+..|+|.|..+
T Consensus 257 g~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvf 336 (417)
T COG2223 257 GLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVF 336 (417)
T ss_pred HHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchhe
Confidence 988788888899999999999999999999999888887754 33332 3333 34555666666666665
Q ss_pred hhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHH
Q 012965 143 SAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIIL 216 (452)
Q Consensus 143 ~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~ 216 (452)
-.. +.+-.+ +-+.. ...... ..++|...-|..-+...+..+ .+...|+......+++..+.+
T Consensus 337 k~I-p~if~~--~~G~v-------~G~vga-~G~lGGf~lp~~~g~~~~~tg-~~~~~f~~~~~~~~~a~v~~~ 398 (417)
T COG2223 337 KMI-PVIFPK--ETGAV-------TGIVGA-IGGLGGFFLPLAFGVSLDLTG-SYTGAFMLLLAFYLVALVLTW 398 (417)
T ss_pred eec-hHHHHh--hhhHH-------HHHHHH-hccccccchhHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHH
Confidence 443 212111 11121 111111 223444444555555555444 466777777777666666554
No 171
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.81 E-value=3.7e-07 Score=87.45 Aligned_cols=81 Identities=19% Similarity=0.174 Sum_probs=57.8
Q ss_pred HHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHHhHhhhh
Q 012965 63 LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLL 141 (452)
Q Consensus 63 i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G~~~~~~ 141 (452)
..+++|.++.+.+.........+.++.++.|++.||+|||+.+..+..+..++. +..+.++.+.....-.+.+.+.+..
T Consensus 230 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 309 (392)
T PRK10473 230 LMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVG 309 (392)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346789999888887777777777888889999999999999999988887765 4455555544444444444444444
Q ss_pred hh
Q 012965 142 FS 143 (452)
Q Consensus 142 ~~ 143 (452)
.+
T Consensus 310 ~~ 311 (392)
T PRK10473 310 FG 311 (392)
T ss_pred hH
Confidence 33
No 172
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.80 E-value=1.6e-07 Score=91.29 Aligned_cols=113 Identities=19% Similarity=0.269 Sum_probs=75.6
Q ss_pred hhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCC
Q 012965 268 FLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKS 344 (452)
Q Consensus 268 ~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (452)
....|.+.+. |.+. +...+...++..++.++.|+++||+|||+. +..+..+.++........... .
T Consensus 47 ~~~~p~~~~~--g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~--~~~~~~~~~~~~~~~~~~~~~-~------ 115 (438)
T TIGR00712 47 ALAMPYLVEQ--GFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVF--LPAGLILSAAVMLLMGFVPWA-T------ 115 (438)
T ss_pred HhhhHHHHHc--CCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCcee--hHHHHHHHHHHHHHHhccccc-c------
Confidence 3345544433 4433 677778888999999999999999998873 444444444443332221111 0
Q ss_pred CCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 345 GGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
...+...+..++.+++.+..++.....+.|.+|+++|++++|+.+..
T Consensus 116 ----~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~ 162 (438)
T TIGR00712 116 ----SSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCA 162 (438)
T ss_pred ----chHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHH
Confidence 00123445566778888888888889999999999999999987764
No 173
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.80 E-value=5.1e-07 Score=86.72 Aligned_cols=147 Identities=16% Similarity=0.199 Sum_probs=93.1
Q ss_pred hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHH-HHHHHHHHHH-HHh-----cCccHHHHHH
Q 012965 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACV-TYCLTYILSC-ITK-----HSPQYKILMI 129 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~-~~~~~~~i~~-l~~-----~~~~~~~l~~ 129 (452)
..+.|...+++|.+..+.+.+.....+.+.++.+..|+++||+|||+.+. .+.+..+++. ... ..++.+...+
T Consensus 242 ~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~ 321 (402)
T TIGR00897 242 AVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALI 321 (402)
T ss_pred HHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHH
Confidence 34556666889999998887777766777788889999999999988764 3333333322 111 2356777788
Q ss_pred HHHHHHhHhhhhhhhhhhhhhhhc--ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHH
Q 012965 130 GRILGGIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACF 207 (452)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~ 207 (452)
..++.|++.+...+.. . .+.|. ++|+...+ .. +....+|..++|.+.+.+.+. ++|...+++.+++
T Consensus 322 ~~~~~G~~~~~~~~~~-~-~~~~~~~~~~g~~~g----~~----~~~~~lg~~~gp~i~g~l~~~--~g~~~~~~~~a~~ 389 (402)
T TIGR00897 322 IAIALGIFLAGYVPLA-A-VFPTLAPKHKGAAMS----VL----NLSAGLSAFLAPAIAVLFIGF--FGAIGVVWIFAAL 389 (402)
T ss_pred HHHHHHHHHHHHHHHH-H-HHHhhCcchhHHHHH----HH----HHHHHHHHHHHHHHHHHHHhh--cchHHHHHHHHHH
Confidence 8899999888765432 3 45554 33333333 22 223445566666777776654 4566777777666
Q ss_pred HHHHHHHH
Q 012965 208 LAIGMVII 215 (452)
Q Consensus 208 ~~~~~~~~ 215 (452)
.++.....
T Consensus 390 ~~i~~~~~ 397 (402)
T TIGR00897 390 YVVSAFLT 397 (402)
T ss_pred HHHHHHHH
Confidence 65544443
No 174
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.80 E-value=2.2e-07 Score=87.79 Aligned_cols=95 Identities=15% Similarity=0.149 Sum_probs=74.8
Q ss_pred hhHHHHHhh-cCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCc-cHHHHHHHHHHH
Q 012965 58 PYVYYLYST-YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSP-QYKILMIGRILG 134 (452)
Q Consensus 58 p~l~~i~~~-~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~-~~~~l~~~r~l~ 134 (452)
...|...++ +|.++.+.+.+.....+...++.++.|++.||+|||+.+..+..+.+++. +..+.+ +.+.+.+..++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAI 311 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHH
Confidence 444565554 89999999988777777777888889999999999999988877776665 445566 488888999999
Q ss_pred HhHhhhhhhhhhhhhhhhc
Q 012965 135 GIATSLLFSAFESWLVAEH 153 (452)
Q Consensus 135 G~~~~~~~~~~~~~~i~e~ 153 (452)
|++.+...+...+ ++.|.
T Consensus 312 g~~~~~~~~~~~~-~~~~~ 329 (365)
T TIGR00900 312 GVGYGPINVPQGT-LLQRR 329 (365)
T ss_pred HHHHHHHHHHHHH-HHHHh
Confidence 9999988887755 66665
No 175
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.79 E-value=1.8e-07 Score=88.69 Aligned_cols=110 Identities=16% Similarity=0.147 Sum_probs=78.7
Q ss_pred hhhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHh-hhcCCCCc
Q 012965 267 VFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTS-FLVAPSNV 342 (452)
Q Consensus 267 ~~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 342 (452)
...+.|.+.++.++.+. +...+...++..++.++.|+++||+|||+. +..+..+..+......... ..
T Consensus 20 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~--~~~~~~~~~i~~~~~~~~~~~~------ 91 (366)
T TIGR00886 20 FSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYT--TTLSLLLLAIPCLWAGLAVQSY------ 91 (366)
T ss_pred hHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHH--HHHHHHHHHHHHHHHHHHhhhH------
Confidence 46677765666667655 677778889999999999999999999883 5555555555554443333 22
Q ss_pred CCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhh
Q 012965 343 KSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (452)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (452)
+...+..++.|++.+ ..+....++.|.+|+++|+++.++...
T Consensus 92 ---------~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~ 133 (366)
T TIGR00886 92 ---------SVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAG 133 (366)
T ss_pred ---------HHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHH
Confidence 345566677777754 456678899999999999999887653
No 176
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.77 E-value=2.4e-07 Score=91.26 Aligned_cols=160 Identities=15% Similarity=0.103 Sum_probs=92.2
Q ss_pred hHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhc---CccHH-HHHHHHHH
Q 012965 59 YVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKH---SPQYK-ILMIGRIL 133 (452)
Q Consensus 59 ~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~---~~~~~-~l~~~r~l 133 (452)
+.|.+.++.|.+..+.+.......+...++.++.|+++||+|||+.++.+..+.+++. +.+. .+..+ ....+.++
T Consensus 293 ~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~ 372 (479)
T PRK10077 293 YAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLF 372 (479)
T ss_pred HHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHH
Confidence 4467778888887666555444445566777789999999999999999998887764 3222 12111 22334444
Q ss_pred HHhHhhhhh-hhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhh--hhhhcccCCCcchhhHHHHHH
Q 012965 134 GGIATSLLF-SAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFG--NLLVDSFSLGPVAPFDAAACF 207 (452)
Q Consensus 134 ~G~~~~~~~-~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~--~~l~~~~~~~~~~~f~~~~~~ 207 (452)
.+.+.+... +.. ..++.|. ++|+...+... ....++..+++.+.|.+. +++.+ .++|+..|...+++
T Consensus 373 ~~~~~~~~~~~~~-~~~~~e~~p~~~r~~~~g~~~----~~~~~g~~~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~ 445 (479)
T PRK10077 373 YVAAFAMSWGPVC-WVLLSEIFPNAIRGKALAIAV----AAQWIANYFVSWTFPMMDKNSWLVA--HFHNGFSYWIYGCM 445 (479)
T ss_pred HHHHHhccccchh-HHHhHhhCChhHHHHHHHHHH----HHHHHHHHHHHHHhHHHHhccchhh--hccCccHHHHHHHH
Confidence 444444322 333 3367776 34455444332 233344555555555444 33333 34556667776666
Q ss_pred HHHHHHHHHhccccccCC
Q 012965 208 LAIGMVIILSSWTENYGD 225 (452)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~ 225 (452)
.++..+......||++++
T Consensus 446 ~~~~~~~~~~~~~e~~~~ 463 (479)
T PRK10077 446 GVLAALFMWKFVPETKGK 463 (479)
T ss_pred HHHHHHHHHhccccCCCC
Confidence 666655555456665543
No 177
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.77 E-value=9.4e-07 Score=85.72 Aligned_cols=154 Identities=16% Similarity=0.151 Sum_probs=108.9
Q ss_pred HhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcc--hHHHHHHHHHHHHH-HHhc--------CccHHHHHHHHH
Q 012965 64 YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRK--RACVTYCLTYILSC-ITKH--------SPQYKILMIGRI 132 (452)
Q Consensus 64 ~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr--~~l~~~~~~~~i~~-l~~~--------~~~~~~l~~~r~ 132 (452)
.+++|++..+...+.....+.+.+++.++|++.||+|.| +++..+...+.+.. ...+ .++-+.+.+.-+
T Consensus 309 ~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~ 388 (477)
T PF11700_consen 309 TEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAV 388 (477)
T ss_pred HHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHH
Confidence 368999999998887888888889999999999999999 89988888885533 2222 567888999999
Q ss_pred HHHhHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHH
Q 012965 133 LGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (452)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~ 212 (452)
+.|+..|...+...+ +.+|.-++++....++. +... .-....++|.+.+.+.+..+ +-|..+....++.++..
T Consensus 389 ~~G~~~G~~qs~sRs-~~~~LiP~g~e~efFgl-y~i~----gk~ss~lGPll~g~i~~~tg-~~r~g~~~l~~lf~~gl 461 (477)
T PF11700_consen 389 LIGLFMGGIQSASRS-LFSRLIPPGREAEFFGL-YAIT----GKASSWLGPLLFGLITDATG-SQRYGFLFLLVLFLIGL 461 (477)
T ss_pred HHHHHhhhHHHHHHH-HHHHhCCCchhhHHHHH-HHHH----HHHHHHHHHHHHHHHHHHhC-CchhHHHHHHHHHHHHH
Confidence 999999999999977 88888666665442222 3322 22445566666666665443 24566666666666665
Q ss_pred HHHHhccccccCC
Q 012965 213 VIILSSWTENYGD 225 (452)
Q Consensus 213 ~~~~~~~~~~~~~ 225 (452)
++.. ..++++++
T Consensus 462 ~ll~-~v~~~~g~ 473 (477)
T PF11700_consen 462 ILLF-FVDVEKGR 473 (477)
T ss_pred HHHh-hccchhhh
Confidence 5554 45544443
No 178
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.76 E-value=9.7e-07 Score=86.60 Aligned_cols=145 Identities=21% Similarity=0.241 Sum_probs=100.3
Q ss_pred hhHHHHH-hhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHH
Q 012965 58 PYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (452)
Q Consensus 58 p~l~~i~-~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G 135 (452)
..+|.+. +++|.++...|.+.+...+++.+++.+.+++.+|+++++.+..+.+.++++. ..+++++.+...+.-++.|
T Consensus 239 aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G 318 (524)
T PF05977_consen 239 ALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAG 318 (524)
T ss_pred HhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 3445555 5789999999998888888777888889999999999999999988888876 6699999999999999999
Q ss_pred hHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHH
Q 012965 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (452)
Q Consensus 136 ~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~ 212 (452)
++.........+ .+.+. +.||+..+..+ .....+..+|..+.+.+ .+.. +.+..+.+.++..++..
T Consensus 319 ~~~~~~~~~~~t-~~Q~~~P~~~~GRv~si~~----~~~~g~~~lGsll~G~l----a~~~--g~~~al~~a~~~lll~~ 387 (524)
T PF05977_consen 319 AAWIIANSSLNT-LVQLSVPDWVRGRVFSIYQ----MVFFGGMPLGSLLWGFL----ADHF--GVRTALLIAGAALLLSA 387 (524)
T ss_pred HHHHHHHHHHHH-HHHHhCCHHHHhHHHHHHH----HHHHHHHHHHHHHHHHH----HHHh--CHHHHHHHHHHHHHHHH
Confidence 998887766644 44433 45666555433 33334444555444444 3333 33455555555444433
Q ss_pred H
Q 012965 213 V 213 (452)
Q Consensus 213 ~ 213 (452)
.
T Consensus 388 ~ 388 (524)
T PF05977_consen 388 L 388 (524)
T ss_pred H
Confidence 3
No 179
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.76 E-value=7.9e-07 Score=85.57 Aligned_cols=123 Identities=12% Similarity=0.049 Sum_probs=79.5
Q ss_pred HhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhc-----CccHHHHHHHHHHHHhH
Q 012965 64 YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKH-----SPQYKILMIGRILGGIA 137 (452)
Q Consensus 64 ~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~-----~~~~~~l~~~r~l~G~~ 137 (452)
.+++|.++.+.+...........++.++.|+++||+|+|+.+..+.++..++. +... .++.+.+.+..++.|++
T Consensus 243 ~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g 322 (406)
T PRK15402 243 ISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFG 322 (406)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHH
Confidence 46789999888877665555566777889999999999999988887776654 3222 34566778888999999
Q ss_pred hhhhhhhhhhhh-hhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccC
Q 012965 138 TSLLFSAFESWL-VAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS 194 (452)
Q Consensus 138 ~~~~~~~~~~~~-i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~ 194 (452)
.+...+...... ..+.+++++..+ ..+.... ++..+++.+.+.+.+..+
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~g~~~~----~~~~~~~----~~~~~g~~~~~~l~~~~~ 372 (406)
T PRK15402 323 IGLANAGLYRLTLFSSDVSKGTVSA----AMGMLSM----LIFTVGIELSKHAYLGGG 372 (406)
T ss_pred HHHHhhhHHHHHhhhccccccHHHH----HHHHHHH----HHHHHHHHHHHhcccCCc
Confidence 988766543312 222245555444 2333333 344455555555554333
No 180
>PRK09848 glucuronide transporter; Provisional
Probab=98.75 E-value=1.8e-07 Score=91.25 Aligned_cols=119 Identities=8% Similarity=0.018 Sum_probs=75.1
Q ss_pred hhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcC--ccHHHHHHHHHHHHhHhhhh
Q 012965 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS--PQYKILMIGRILGGIATSLL 141 (452)
Q Consensus 65 ~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~--~~~~~l~~~r~l~G~~~~~~ 141 (452)
+.+|.++...+.......+...+..++.+++.||+|+|+++..+.++.+++. +..+. ++.+.+.+..++.|+|.+..
T Consensus 257 ~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~ 336 (448)
T PRK09848 257 YVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVT 336 (448)
T ss_pred eecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHH
Confidence 3466554433333333344455677889999999999999999988887765 33443 36777777888999999988
Q ss_pred hhhhhhhhhhhc---c--cc-cchhhHHHHHHHHHHHHHHHHHHHHHHh
Q 012965 142 FSAFESWLVAEH---N--KR-GFEQQWLSITFSKAIFLGNGLVAILSGL 184 (452)
Q Consensus 142 ~~~~~~~~i~e~---~--~r-~~~~~~~~~~~~~~~~~g~~ig~~~~~~ 184 (452)
.+...+ +..|. + ++ .+..+......+....+|..+|+.+.+.
T Consensus 337 ~~~~~a-l~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~ 384 (448)
T PRK09848 337 MTVMWA-LEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAF 384 (448)
T ss_pred HHHHHH-HHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877655 55443 1 11 1233444444555555555555554443
No 181
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.74 E-value=1.6e-07 Score=91.57 Aligned_cols=147 Identities=12% Similarity=0.011 Sum_probs=95.5
Q ss_pred hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhcccccccccccc--CcchHHHHH--HHHHHHHH-HHhcCccHHHHHHHH
Q 012965 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ--GRKRACVTY--CLTYILSC-ITKHSPQYKILMIGR 131 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~--Grr~~l~~~--~~~~~i~~-l~~~~~~~~~l~~~r 131 (452)
..+++...+++|.+..+.+.+.+...+...++.++.|+++||. ++|+....+ .+..+++. ++...++++.+++.+
T Consensus 261 ~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~ 340 (455)
T TIGR00892 261 IIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYC 340 (455)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHH
Confidence 3445566678899999999888887777778888899999984 344434333 23333443 446778899999999
Q ss_pred HHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHH
Q 012965 132 ILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFL 208 (452)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~ 208 (452)
++.|++.+...+...+ ++.|. ++++...+. ......+|..++|.+++.+.+..+ +|+..|.+.+++.
T Consensus 341 ~~~G~~~g~~~~~~~~-~~~~~~~~~~~g~~~g~--------~~~~~~lg~~igp~i~G~l~~~~g-~~~~~f~~~~~~~ 410 (455)
T TIGR00892 341 IFFGLSFGSVGALLFE-VLMDLVGAQRFSSAVGL--------VTIVECCAVLIGPPLAGRLVDATK-NYKYIFYASGSIV 410 (455)
T ss_pred HHHHHHhchHHHHHHH-HHHHHhhHHHHhhHHhH--------HHHHHHHHHHccccceeeeehhcC-CcchHHHHhhHHH
Confidence 9999998888777655 65655 333433332 222344666677777777665432 3566676666555
Q ss_pred HHHHH
Q 012965 209 AIGMV 213 (452)
Q Consensus 209 ~~~~~ 213 (452)
++..+
T Consensus 411 li~~~ 415 (455)
T TIGR00892 411 VSAGL 415 (455)
T ss_pred HHHHH
Confidence 54443
No 182
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.74 E-value=4.1e-07 Score=89.41 Aligned_cols=156 Identities=12% Similarity=0.010 Sum_probs=91.6
Q ss_pred hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHh---c--Cc------cH
Q 012965 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITK---H--SP------QY 124 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~---~--~~------~~ 124 (452)
..+.|...+++|.+..+.+.......+.+.++.++.|+++||+|||+.+..+..+.+++. +.+ . .+ +.
T Consensus 304 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (481)
T TIGR00879 304 MYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGN 383 (481)
T ss_pred HHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhH
Confidence 344566778899998777777777777777888889999999999999998877776654 333 1 22 22
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhhhhhhcc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhh
Q 012965 125 KILMIGRILGGIATSLLFSAFESWLVAEHN---KRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPF 201 (452)
Q Consensus 125 ~~l~~~r~l~G~~~~~~~~~~~~~~i~e~~---~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f 201 (452)
..+....+..+.......+.. ..++.|.. +|+...+. .+ ....+|..+++.+.+.+.++.+ |+..|
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~----~~----~~~~lg~~i~~~~~~~~~~~~~--~~~~f 452 (481)
T TIGR00879 384 VAIVFILLFIAFFAMGWGPVP-WVIVSEIFPLSLRPKGISI----AV----AANWLANFIVGFLFPTMLESIG--VGGVF 452 (481)
T ss_pred HHHHHHHHHHHHHHccccCee-hhhhhccCChHHHHHHHHH----HH----HHHHHHHHHHHHHHHHHHHhcC--cccee
Confidence 233333333332222232333 32556652 33333332 22 2233556666666666665444 45667
Q ss_pred HHHHHHHHHHHHHHHhcccccc
Q 012965 202 DAAACFLAIGMVIILSSWTENY 223 (452)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~ 223 (452)
.+.+++.++..+......||++
T Consensus 453 ~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 453 IFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred hhHHHHHHHHHHHHheecccCC
Confidence 7766666666555554556544
No 183
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.73 E-value=1.6e-06 Score=81.84 Aligned_cols=148 Identities=14% Similarity=0.067 Sum_probs=98.9
Q ss_pred HhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch--HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHH
Q 012965 242 AIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH--GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIV 319 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~ 319 (452)
+++.+++...+.+...+ .+.....+.+++--++++..+.+. |...+..-.+.++.-+..+++.+|+|+-+ ++.++
T Consensus 366 ~~~~s~~~llff~~av~-mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~--v~~lg 442 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVV-MGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVN--VMYLG 442 (618)
T ss_pred HHhcCCCEEehhHHHHH-HHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccc--eeeeh
Confidence 44555554443333222 222233344444445555443332 55555555778888899999999999877 35555
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh----
Q 012965 320 FVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP---- 395 (452)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~---- 395 (452)
..+...=++......+. |..+..-++-|+..+..|...-++++...|++.|.++.++.+..
T Consensus 443 La~~~~Rf~~~S~L~n~---------------W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~Gl 507 (618)
T KOG3762|consen 443 LACNVGRFLYYSYLQNP---------------WMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGL 507 (618)
T ss_pred hhHHHHHHHHHHHhcCc---------------hheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhccc
Confidence 55555555555444443 57778889999999999999999999999999999998887763
Q ss_pred ---hhHHHHHHHhcc
Q 012965 396 ---LNIFVCVVLYNV 407 (452)
Q Consensus 396 ---~~~~~~~~l~~~ 407 (452)
.|.++|+.+...
T Consensus 508 G~g~GslIGG~~v~~ 522 (618)
T KOG3762|consen 508 GKGLGSLIGGFVVER 522 (618)
T ss_pred Ccchhhhhhhhhhee
Confidence 566777777655
No 184
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.73 E-value=7.7e-07 Score=83.99 Aligned_cols=131 Identities=12% Similarity=0.080 Sum_probs=82.0
Q ss_pred hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhcccccccccccc-CcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHH
Q 012965 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILG 134 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~-Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~ 134 (452)
..++|...++.|.+..+.+...+...+...+++++.|++.||+ +||+.+..+..+.+++. ...+.++.+... .-.+.
T Consensus 217 ~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~ 295 (355)
T TIGR00896 217 IGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVL 295 (355)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHH
Confidence 4456677778899999999888888887888889999999999 56667777777776664 344444333222 45678
Q ss_pred HhHhhhhhhhhhhhhhhhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccC
Q 012965 135 GIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS 194 (452)
Q Consensus 135 G~~~~~~~~~~~~~~i~e~-~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~ 194 (452)
|++.+...+...+ .+.+. ++++...... ...+ .. ..++..++|.+.+.+.++.+
T Consensus 296 g~~~g~~~~~~~~-~~~~~~~~~~~~g~~~-~~~~---~~-~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 296 GLGQGGAFPLALT-LIGLRSRQAAQAAALS-AMAQ---SI-GYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHhhhhHhHHHHH-HHHHhccCHHHHHHHH-HHHH---HH-HHHHHHHHHHHHHHHHHHhc
Confidence 9999888877645 44332 2222222211 1111 11 22444566666666665443
No 185
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.72 E-value=2.5e-07 Score=86.56 Aligned_cols=145 Identities=10% Similarity=0.085 Sum_probs=102.8
Q ss_pred cchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHHhHhhhhhhhhhhhh
Q 012965 71 KGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWL 149 (452)
Q Consensus 71 ~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~ 149 (452)
+...|.+.+.+...-.+.-.+..++.+|+|.|+.++++..+.++=. .++++++.+.+.+.+.+.|+-.+....+... |
T Consensus 258 ~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fk-Y 336 (412)
T PF01306_consen 258 NQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFK-Y 336 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 3445666666555555555568999999999999999999998865 7899999999999999999999999888877 8
Q ss_pred hhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHhccccc
Q 012965 150 VAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTEN 222 (452)
Q Consensus 150 i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 222 (452)
+++..+++.. ...+..+...+..+|..+.+.+++.+.|+.|. +..|++.+.+.+...++..+.++++
T Consensus 337 I~~~fd~rls----At~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~--~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 337 ITAHFDKRLS----ATLYLVGFQFAKQIGIIILSPLAGYLYDRIGF--QHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHHHS-GGGH----HHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred HHHhCCHhHH----HHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCc--HHHHHHHHHHHHHHHHHheeeecCC
Confidence 8877333332 22455556667778888888899998876544 5677777776665555555444443
No 186
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.72 E-value=6.4e-07 Score=82.84 Aligned_cols=101 Identities=22% Similarity=0.289 Sum_probs=70.2
Q ss_pred hhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhcccccccccc----ccCcchHHHHHHHHHH-HHH-HHhcCccHH
Q 012965 52 GDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLAD----KQGRKRACVTYCLTYI-LSC-ITKHSPQYK 125 (452)
Q Consensus 52 ~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~D----r~Grr~~l~~~~~~~~-i~~-l~~~~~~~~ 125 (452)
+...+..++++..++.|++....+.+-..+-+.+.+.+|+.|..+| |+||||.++....+.. ++. +..++.++.
T Consensus 47 ~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig 126 (498)
T KOG0637|consen 47 GWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIG 126 (498)
T ss_pred HHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhh
Confidence 4444567777888999999888887778888889999999999999 6899998887766553 354 445544333
Q ss_pred -----------------HHHHHHHHHHhHhhhhhhhhhhhhhhhc
Q 012965 126 -----------------ILMIGRILGGIATSLLFSAFESWLVAEH 153 (452)
Q Consensus 126 -----------------~l~~~r~l~G~~~~~~~~~~~~~~i~e~ 153 (452)
.++++-.+.=++.-.....+.+ ++.|.
T Consensus 127 ~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra-~L~Dl 170 (498)
T KOG0637|consen 127 LLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRA-LLADL 170 (498)
T ss_pred HHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHH-HHHHh
Confidence 3334444444455555566656 66665
No 187
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.72 E-value=1.3e-06 Score=83.94 Aligned_cols=143 Identities=15% Similarity=0.232 Sum_probs=84.7
Q ss_pred HHHhhcCCCcchhHHHHHH-HHhhhhhccccccccccccCcchHHHHHHHHHHHHH----HHhcC-ccHHHHHHHHH---
Q 012965 62 YLYSTYGFGKGEIGQLFIA-GFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC----ITKHS-PQYKILMIGRI--- 132 (452)
Q Consensus 62 ~i~~~~g~s~~~~g~~~~~-~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~----l~~~~-~~~~~l~~~r~--- 132 (452)
.+.+++|+++.+++.+... +.....++.++.|++.||+|||+.+..+..+..+.. ..++. ++.+.+.+.-+
T Consensus 235 ~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 314 (402)
T PRK11902 235 FLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIEN 314 (402)
T ss_pred HHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 4556789999999987654 333455667789999999999998877776665542 12344 45565555544
Q ss_pred -HHHhHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHH
Q 012965 133 -LGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIG 211 (452)
Q Consensus 133 -l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~ 211 (452)
..|++.+...+.... ++.+..+ +...+. .+.. ..++...++.+++.+.+. ++|+..|...+.+.++.
T Consensus 315 ~~~g~~~~~~~~~~~~-~~~~~~~-~~~~~~----~~~~----~~l~~~~~~~~~G~l~~~--~G~~~~f~~~~~~~~~~ 382 (402)
T PRK11902 315 LCGGMGTAAFVALLMA-LCNRSFS-ATQYAL----LSAL----ASVGRVYVGPTSGYLVEA--YGWPGFYLMTVVIALPG 382 (402)
T ss_pred HHHHHHHHHHHHHHHH-hcCCCCc-HHHHHH----HHHH----HHHHHHHHHHHHHHHHHH--hChHHHHHHHHHHHHHH
Confidence 445555555555433 4554422 111121 1211 223444344567777655 45677788877777666
Q ss_pred HHHHH
Q 012965 212 MVIIL 216 (452)
Q Consensus 212 ~~~~~ 216 (452)
.++..
T Consensus 383 ~~~~~ 387 (402)
T PRK11902 383 LALLW 387 (402)
T ss_pred HHHHH
Confidence 55544
No 188
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.72 E-value=1.5e-06 Score=83.10 Aligned_cols=142 Identities=12% Similarity=-0.059 Sum_probs=88.5
Q ss_pred HHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHHhHhhhh
Q 012965 63 LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLL 141 (452)
Q Consensus 63 i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G~~~~~~ 141 (452)
..+.+|.++.+.|.+.....++..++++..+++.||+++|+++..+... ++.. +.++.++++...+..++.|++.+..
T Consensus 232 ~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~ 310 (393)
T PRK11195 232 APVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGILM-GLVVLLMALQHSLLPAYPLLILIGALGGFF 310 (393)
T ss_pred HHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHHHhhhhh
Confidence 3467899999999888877777778888899999999999988877533 3333 4466777777778888999998887
Q ss_pred hhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHH
Q 012965 142 FSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIG 211 (452)
Q Consensus 142 ~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~ 211 (452)
.+...+ .+.|..++....+......+....++..++..+...+ +..+.+++..+...+.+....
T Consensus 311 ~~~~~~-~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 374 (393)
T PRK11195 311 VVPMNA-LLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-----VKLGVPVVAVIVGFGLLVALA 374 (393)
T ss_pred hhhHHH-HHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-----HHcCCCHHHHHHHHHHHHHHH
Confidence 766655 5555422211112222233334444444444333322 234555555555555543333
No 189
>TIGR00895 2A0115 benzoate transport.
Probab=98.71 E-value=1.5e-07 Score=90.18 Aligned_cols=110 Identities=19% Similarity=0.237 Sum_probs=78.3
Q ss_pred hhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCC
Q 012965 268 FLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKS 344 (452)
Q Consensus 268 ~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (452)
....|.+.+ .++.+. +...+...++.+++.++.|+++||+|||+ .+..+..+..+...........
T Consensus 37 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~--~~~~~~~~~~~~~~~~~~~~~~-------- 105 (398)
T TIGR00895 37 GFAAPAISA-EWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKR--VLLWSILLFSVFTLLCALATNV-------- 105 (398)
T ss_pred HhhHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHH--HHHHHHHHHHHHHHHHHHccch--------
Confidence 444555544 345544 56677777889999999999999999887 3444444444444333322211
Q ss_pred CCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 345 GGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
+...+..++.+++.+...+...++..|.+|+++|+++.|+.+..
T Consensus 106 -------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 149 (398)
T TIGR00895 106 -------TQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCG 149 (398)
T ss_pred -------HHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhH
Confidence 35566778888899988999999999999999999999887764
No 190
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.71 E-value=1.7e-07 Score=92.44 Aligned_cols=127 Identities=17% Similarity=0.150 Sum_probs=87.4
Q ss_pred hhhhccccccCCCCCc---hHHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcC
Q 012965 267 VFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVK 343 (452)
Q Consensus 267 ~~~~~p~~~~~~~~~~---~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (452)
.....|.+.++ .+.+ .++..+...++..++.++.|++.||+|||+ .+..+..+..+.........+.
T Consensus 21 ~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~--~~~~~~~~~~~~~~~~~~~~~~------- 90 (485)
T TIGR00711 21 VNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRR--LFLISTFAFTLGSLLCGVAPNL------- 90 (485)
T ss_pred HHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHH--HHHHHHHHHHHHHHHHhCcCCH-------
Confidence 34456655543 4443 267778888999999999999999999988 3445544444444433222111
Q ss_pred CCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh------hhHHHHHHHhccccCC
Q 012965 344 SGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFP 411 (452)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~ 411 (452)
+..++..++.|++.+...+...+++.|.+|+++|+++.++.+.. .+..+++.+.+..+|.
T Consensus 91 --------~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~ 156 (485)
T TIGR00711 91 --------ELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWR 156 (485)
T ss_pred --------HHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCce
Confidence 35667788889998988899999999999999999999887654 2334445555544443
No 191
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.71 E-value=1.7e-07 Score=89.64 Aligned_cols=102 Identities=19% Similarity=0.317 Sum_probs=76.9
Q ss_pred CCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhh
Q 012965 277 NDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSL 353 (452)
Q Consensus 277 ~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (452)
+..+.+. +...+...++..++.++.|++.||+|||+. +..+..+..+.........+. +.
T Consensus 22 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~--~~~~~~~~~~~~~~~~~~~~~---------------~~ 84 (399)
T TIGR00893 22 EDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKT--LAVFIVIWGVFTGLQAFAGAY---------------VS 84 (399)
T ss_pred HhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCccee--eHHHHHHHHHHHHHHHHHcCH---------------HH
Confidence 3445443 677888889999999999999999999983 444444444444443332222 46
Q ss_pred HHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 354 QLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 354 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
..+..++.|++.+...+....++.|.+|+++|++.+++.+..
T Consensus 85 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 126 (399)
T TIGR00893 85 LYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSA 126 (399)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 677788899999988999999999999999999999887764
No 192
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.70 E-value=2.7e-07 Score=91.07 Aligned_cols=134 Identities=11% Similarity=0.026 Sum_probs=89.1
Q ss_pred hhhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcC
Q 012965 267 VFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVK 343 (452)
Q Consensus 267 ~~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (452)
+..-.|.+.++ +|.+. ++..+.+.++...+.++.|+++||+|||+ .+..+..+..+.........+.
T Consensus 25 v~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~--~l~~~~~~~~~~~~~~~~a~~~------- 94 (495)
T PRK14995 25 LHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKR--LLMLGGTLFGLASLAAAFSPTA------- 94 (495)
T ss_pred HHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH--HHHHHHHHHHHHHHHHHHcCCH-------
Confidence 45556776543 44432 67777788888889999999999999998 3555555555555544433222
Q ss_pred CCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcC-Ccccccchhhhhhhh------hhHHHHHHHhccccCCchHHH
Q 012965 344 SGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYI-PEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMF 416 (452)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~ 416 (452)
+..+++-.+.|++.+...|.....+.+.+ |+++|++++|+.... .++.+++.+.+..+ +...+
T Consensus 95 --------~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~g--wr~~f 164 (495)
T PRK14995 95 --------SWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFY--WGSVF 164 (495)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC--hHHHH
Confidence 35667778889988888887777776665 778899998887664 34455666666544 33344
Q ss_pred HHHH
Q 012965 417 GMCS 420 (452)
Q Consensus 417 ~~~~ 420 (452)
....
T Consensus 165 ~i~~ 168 (495)
T PRK14995 165 LINV 168 (495)
T ss_pred HHHH
Confidence 4433
No 193
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.70 E-value=2.3e-07 Score=89.96 Aligned_cols=102 Identities=15% Similarity=0.100 Sum_probs=76.9
Q ss_pred CCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhh
Q 012965 277 NDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSL 353 (452)
Q Consensus 277 ~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (452)
+..+.+. +...+...++..++.++.|+++||+|||+ .+..+....+++........+. +.
T Consensus 46 ~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~--~l~~~~~~~~~~~~~~~~~~~~---------------~~ 108 (426)
T PRK12307 46 ADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKP--LMMWSIVAYSVGTGLSGLASGV---------------IM 108 (426)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChH--HHHHHHHHHHHHHHHHHHHhHH---------------HH
Confidence 3445443 66777788899999999999999999988 3555555555554444333332 36
Q ss_pred HHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 354 QLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 354 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
..+.-.+.|++.+...+....++.|.+|+++|+++.|+....
T Consensus 109 l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 150 (426)
T PRK12307 109 LTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSG 150 (426)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHH
Confidence 677778889998888899999999999999999999887664
No 194
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.70 E-value=5.6e-07 Score=88.68 Aligned_cols=159 Identities=11% Similarity=0.092 Sum_probs=93.2
Q ss_pred hcchh-HHHHHHHHHhhhchhhhhhhhhccccccCCCCCchH---HHHHHHHHHHHHHhHHHHHHhcc-CCCCchhHHHH
Q 012965 244 ASDEK-IALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHG---FIFATFMLASMLGSSLASRLMAR-SPPRVESYMQI 318 (452)
Q Consensus 244 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~g~l~dr-~g~~~~~~~~~ 318 (452)
+++|+ ++.......+.... ++....+.|.|+++.+|.+.. ..............+++|+++|| +|||+. +..
T Consensus 17 ~~~p~~~~~~~~~~~~~~~~-~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~--~~~ 93 (500)
T PRK09584 17 FKQPKAFYLIFSIELWERFG-YYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRV--IML 93 (500)
T ss_pred hcCCchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHH--HHH
Confidence 45665 44444344444444 444678899998877777653 33333333334445689999999 598873 555
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCccc--ccchhhhhhhh-
Q 012965 319 VFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA--RSTIMNFFRIP- 395 (452)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~--r~~~~g~~~~~- 395 (452)
+..+..++.......... .....++..+.+++.+...+...++..|.+|++. |..++++.+..
T Consensus 94 g~~~~~ig~~l~~~~~~~--------------~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~ 159 (500)
T PRK09584 94 GAIVLAIGYALVAWSGHD--------------AGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSI 159 (500)
T ss_pred HHHHHHHHHHHHHHhccc--------------HHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHH
Confidence 555555444333321111 0234556677888888888888899999998654 34456554443
Q ss_pred -----hhHHHHHHHhccccCCchHHHHHHHH
Q 012965 396 -----LNIFVCVVLYNVDAFPITVMFGMCSI 421 (452)
Q Consensus 396 -----~~~~~~~~l~~~~~~~~~~~~~~~~~ 421 (452)
.++.+++++.+.. ++...+...++
T Consensus 160 ~iG~~~gp~i~g~l~~~~--g~~~~F~i~~i 188 (500)
T PRK09584 160 NIGSFFSMLATPWLAAKY--GWSVAFALSVV 188 (500)
T ss_pred HHHHHHHHHHHHHHHHhh--CHHHHHHHHHH
Confidence 3445556665543 45555555543
No 195
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.67 E-value=6.3e-07 Score=86.30 Aligned_cols=130 Identities=11% Similarity=0.063 Sum_probs=83.1
Q ss_pred CCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhH
Q 012965 278 DEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQ 354 (452)
Q Consensus 278 ~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (452)
.++.+. +...+.+.++..+++++.|+++||+|||+ .+..+..+..++........+. +..
T Consensus 45 ~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~--~l~~~~~~~~~~~~~~~~a~~~---------------~~l 107 (413)
T PRK15403 45 DFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRP--VLITGALIFTLACAATLFTTSM---------------TQF 107 (413)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchH--HHHHHHHHHHHHHHHHHHcCCH---------------HHH
Confidence 344444 45667777889999999999999999998 3544544444444433322211 355
Q ss_pred HHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh------hhHHHHHHHhccccCCchHHHHHHHHHHHHH
Q 012965 355 LLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGMCSIFLLVA 426 (452)
Q Consensus 355 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 426 (452)
+++-++.|++.+...+.......|.+|+++|++.++..+.. .++.+++.+.+. .++...+...++..++.
T Consensus 108 ~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~--~gw~~~f~~~~~~~~i~ 183 (413)
T PRK15403 108 LIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHF--VHWKVLFAIIAVMGLIA 183 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHH
Confidence 66677778877765667778899999999988887765553 334555555544 34445555444443333
No 196
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.66 E-value=1.5e-06 Score=84.81 Aligned_cols=150 Identities=11% Similarity=0.028 Sum_probs=78.2
Q ss_pred hhhHHHHHh-hcCCCcchhHHHHHHHHhhhhhcccccccccccc--CcchHHH-HHHHHHHHHH-HH--hcCccHHHHHH
Q 012965 57 GPYVYYLYS-TYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ--GRKRACV-TYCLTYILSC-IT--KHSPQYKILMI 129 (452)
Q Consensus 57 ~p~l~~i~~-~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~--Grr~~l~-~~~~~~~i~~-l~--~~~~~~~~l~~ 129 (452)
..++|...+ +.|.+..+.+.......+.+.++.++.|+++||+ |||+... ....+..++. +. ...++.+...+
T Consensus 273 ~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 352 (452)
T PRK11273 273 LDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMA 352 (452)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHH
Confidence 445566665 4789988888776666666667778899999999 5554322 2222233332 11 22345555555
Q ss_pred HHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHH
Q 012965 130 GRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAAC 206 (452)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~ 206 (452)
..++.|.+........ ..+..|. ++|+...+..+. .+...+...+|.+.+.+.++.+ |+..|.+.+.
T Consensus 353 ~~~~~g~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~-------~~~~g~~~~g~~v~g~l~~~~g--~~~~f~~~~~ 422 (452)
T PRK11273 353 CMIVIGFLIYGPVMLI-GLHALELAPKKAAGTAAGFTGL-------FGYLGGSVAASAIVGYTVDFFG--WDGGFMVMIG 422 (452)
T ss_pred HHHHHHHHHHhHHHHH-HHHHHHHcChhhhhhHHHHHHH-------HHHHHHHHhhhhhHHHHHHHhc--chHHHHHHHH
Confidence 5555555432222222 2234444 334444442222 1221122335566666665544 5667776666
Q ss_pred HHHHHHHHHH
Q 012965 207 FLAIGMVIIL 216 (452)
Q Consensus 207 ~~~~~~~~~~ 216 (452)
..+++.+...
T Consensus 423 ~~~~~~~~~~ 432 (452)
T PRK11273 423 GSILAVILLI 432 (452)
T ss_pred HHHHHHHHHH
Confidence 5555544443
No 197
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.65 E-value=6.1e-05 Score=71.60 Aligned_cols=114 Identities=19% Similarity=0.090 Sum_probs=67.1
Q ss_pred ccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCccc
Q 012965 273 ALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISF 349 (452)
Q Consensus 273 ~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (452)
.|+... |.++ |..-+...+.++.++.+.+++.+|+|..+. -..+...-.. ++.+......... ++....
T Consensus 283 ~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~--G~~~l~~q~~-~L~~~v~~~~~~~----~~~~~~ 354 (432)
T PF06963_consen 283 AYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRA--GLWSLWWQWV-CLALCVVSFWAPG----SPFSSI 354 (432)
T ss_pred HHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhh--HHHHHHHHHH-HHHHHHHHHhcCC----CCchhh
Confidence 344433 5544 455566667899999999999999997763 2233222222 2222211111110 010122
Q ss_pred chhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhh
Q 012965 350 SGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (452)
Q Consensus 350 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (452)
....++.+..+.-+|.=.......-+.+|.+|+++||+..|.-+.
T Consensus 355 s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~s 399 (432)
T PF06963_consen 355 SAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNS 399 (432)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHH
Confidence 234555566666666655667778889999999999999877443
No 198
>PRK11043 putative transporter; Provisional
Probab=98.65 E-value=5.9e-07 Score=86.30 Aligned_cols=135 Identities=13% Similarity=0.009 Sum_probs=83.2
Q ss_pred hhhcccc--ccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 012965 268 FLWTPAL--SPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNV 342 (452)
Q Consensus 268 ~~~~p~~--~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (452)
..+.|.+ .++..+.+. +...+...++..++.++.|+++||+|||+. +..+..+..+.........+.
T Consensus 23 ~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~--~~~~~~~~~~~~~~~~~~~~~------ 94 (401)
T PRK11043 23 DMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPV--LLAGLSLFALGSLGMLWVESA------ 94 (401)
T ss_pred HHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHH--HHHHHHHHHHHHHHHHHhcCH------
Confidence 4445544 234445544 667777788899999999999999999983 444444444443333322211
Q ss_pred CCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh------hhHHHHHHHhccccCCchHHH
Q 012965 343 KSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMF 416 (452)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~ 416 (452)
+...+...+.|++.+...+...+...|.+|++++++..+..+.. .++.+++.+.+.. ++...+
T Consensus 95 ---------~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~--g~~~~~ 163 (401)
T PRK11043 95 ---------AQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHF--GWQAIF 163 (401)
T ss_pred ---------HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--ChHHHH
Confidence 34555667777777766777788899999998887776655432 3334555555543 343444
Q ss_pred HHHHH
Q 012965 417 GMCSI 421 (452)
Q Consensus 417 ~~~~~ 421 (452)
.....
T Consensus 164 ~~~~~ 168 (401)
T PRK11043 164 ATLFA 168 (401)
T ss_pred HHHHH
Confidence 43333
No 199
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.65 E-value=4.5e-07 Score=86.30 Aligned_cols=108 Identities=9% Similarity=0.096 Sum_probs=77.1
Q ss_pred hccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCC
Q 012965 270 WTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGG 346 (452)
Q Consensus 270 ~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (452)
..|.+.++ .+.+. +...+...++..++.++.|++.||+|||+ .+..+.....+...........
T Consensus 13 ~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~--~~~~~~~~~~i~~~~~~~~~~~---------- 79 (377)
T PRK11102 13 ALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKP--VILGGTLVFALAAVACALAQTI---------- 79 (377)
T ss_pred cHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChH--HHHHHHHHHHHHHHHHHHHccH----------
Confidence 34444443 45543 56677788889999999999999999887 3555554444444443332222
Q ss_pred cccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 347 ISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 347 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
+...+...+.|++.+...+...++..|.+|+++|++.+++.+..
T Consensus 80 -----~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (377)
T PRK11102 80 -----DQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLV 123 (377)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 35566677888888888888999999999999999998887653
No 200
>PRK09669 putative symporter YagG; Provisional
Probab=98.63 E-value=6e-07 Score=87.46 Aligned_cols=109 Identities=16% Similarity=0.124 Sum_probs=69.2
Q ss_pred HHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHH-HHH-hc-CccHHHHHHHHHHHHhHhhhhhhhhhhhhhhh
Q 012965 76 QLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILS-CIT-KH-SPQYKILMIGRILGGIATSLLFSAFESWLVAE 152 (452)
Q Consensus 76 ~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~-~l~-~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e 152 (452)
.+.....+.+.+..+++++++||+|+|+.+..+....++. ... .. .++.+.+++..++.|++.+...+...+ +++|
T Consensus 268 ~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~a-m~ad 346 (444)
T PRK09669 268 LFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWS-MFSD 346 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH-HHHh
Confidence 4444444555566678899999999999999887766543 322 22 457777888889999999988877755 6554
Q ss_pred c---c--ccc-chhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 012965 153 H---N--KRG-FEQQWLSITFSKAIFLGNGLVAILSGLF 185 (452)
Q Consensus 153 ~---~--~r~-~~~~~~~~~~~~~~~~g~~ig~~~~~~l 185 (452)
. + +.| ++.+......+....+|.++|+.+++.+
T Consensus 347 ~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~l 385 (444)
T PRK09669 347 VVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWI 385 (444)
T ss_pred hhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 1 112 2333333444444555555555544433
No 201
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.61 E-value=3.3e-07 Score=87.06 Aligned_cols=108 Identities=18% Similarity=0.330 Sum_probs=79.2
Q ss_pred hccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCC
Q 012965 270 WTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGG 346 (452)
Q Consensus 270 ~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (452)
..|.+. +.++.+. +...+...++..++.++.|+++||+|||+ .+..+..+..+...+.......
T Consensus 17 ~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~--~~~~~~~~~~~~~~~~~~~~~~---------- 83 (379)
T TIGR00881 17 AMPYLV-EEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRV--FLPIGLILCAIVNLFFGFSTSL---------- 83 (379)
T ss_pred hhHHHH-HHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCee--hhHHHHHHHHHHHHHHHHhhhH----------
Confidence 344433 3344433 67778888999999999999999999998 3555555555554444333322
Q ss_pred cccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 347 ISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 347 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
+..++..++.|++.+...+...+++.|.+|+++|+++.++.+..
T Consensus 84 -----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 127 (379)
T TIGR00881 84 -----WVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCS 127 (379)
T ss_pred -----HHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhcc
Confidence 46667778888999988999999999999999999998877664
No 202
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.61 E-value=1.2e-06 Score=83.92 Aligned_cols=107 Identities=9% Similarity=0.089 Sum_probs=72.0
Q ss_pred ccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCc
Q 012965 271 TPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGI 347 (452)
Q Consensus 271 ~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (452)
.|.+. +..+.+. +...+...++..++.++.|+++||+|||+. +..+.....+.........+.
T Consensus 31 ~~~i~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~--~~~~~~~~~~~~~~~~~~~~~----------- 96 (394)
T PRK11652 31 IADMA-RDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPV--ILVGMSIFILGTLVALFAHSL----------- 96 (394)
T ss_pred HHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHH--HHHHHHHHHHHHHHHHHHccH-----------
Confidence 44443 3345544 567777888899999999999999999883 444444444333332222111
Q ss_pred ccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 348 SFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 348 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
+...+...+.|++.+...+....+..|.+++++++.+.+..+..
T Consensus 97 ----~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (394)
T PRK11652 97 ----TVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMG 140 (394)
T ss_pred ----HHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 35566677778887777777788889999988888887776553
No 203
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.60 E-value=1e-06 Score=84.45 Aligned_cols=110 Identities=10% Similarity=-0.063 Sum_probs=74.1
Q ss_pred ccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCc
Q 012965 271 TPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGI 347 (452)
Q Consensus 271 ~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (452)
.+.+.+++++.+. +...++..++..+.++..|++.||+|.|+. ...+..+..+......+..+... +
T Consensus 57 ~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v--~~~~~ll~~i~~~~~~~a~~~~~------~-- 126 (462)
T PRK15034 57 TVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRW--TVFSTAILIIPCVWLGIAVQNPN------T-- 126 (462)
T ss_pred HHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHH--HHHHHHHHHHHHHHHHHHHcccC------C--
Confidence 3434444577765 556666778888889999999999999983 44444444444443332211100 0
Q ss_pred ccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhh
Q 012965 348 SFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFR 393 (452)
Q Consensus 348 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~ 393 (452)
..+..++..++.|++ +..++.....+++.+|+++||+++|+..
T Consensus 127 --s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~ 169 (462)
T PRK15034 127 --PFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGING 169 (462)
T ss_pred --CHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHH
Confidence 013566777777876 6677889999999999999999999874
No 204
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.60 E-value=2.1e-06 Score=83.28 Aligned_cols=134 Identities=20% Similarity=0.231 Sum_probs=93.7
Q ss_pred HHhhhhhhhhHHHHHh-hcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcC--ccHH
Q 012965 50 MAGDWLQGPYVYYLYS-TYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS--PQYK 125 (452)
Q Consensus 50 ~~~~~~~~p~l~~i~~-~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~--~~~~ 125 (452)
...........+...+ .+|.+ ...+.......+.+.+..+++++++||+|+|+++..+..+.+++. +..+. +|.+
T Consensus 238 ~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (428)
T PF13347_consen 238 WLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPW 316 (428)
T ss_pred HhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHH
Confidence 3344443444444444 34544 556666667777778888899999999999999999999998875 44554 5999
Q ss_pred HHHHHHHHHHhHhhhhhhhhhhhhhhhc------ccccchhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 012965 126 ILMIGRILGGIATSLLFSAFESWLVAEH------NKRGFEQQWLSITFSKAIFLGNGLVAILSGLF 185 (452)
Q Consensus 126 ~l~~~r~l~G~~~~~~~~~~~~~~i~e~------~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l 185 (452)
.+++.-++.|++.+...+...+ +++|. +...++.+......+...-++.+++..+.+.+
T Consensus 317 ~~~i~~~l~gi~~~~~~~~~~a-~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~ 381 (428)
T PF13347_consen 317 LVLILFILAGIGYGAFFVIPWA-MLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLL 381 (428)
T ss_pred HHHHHHHHhHhhhccccccccc-ccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHH
Confidence 9999999999999999877755 65554 22234566666666666666666666555443
No 205
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.59 E-value=8.2e-07 Score=87.91 Aligned_cols=110 Identities=14% Similarity=0.067 Sum_probs=78.8
Q ss_pred hhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCC
Q 012965 268 FLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKS 344 (452)
Q Consensus 268 ~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (452)
....|.+. +.++.+. +...+...++..++.++.|++.||+|||+ .+..+..+.++.........+.
T Consensus 40 ~~~~~~i~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~--~~~~~~~~~~~~~~~~~~~~~~-------- 108 (496)
T PRK03893 40 TLVLTEVQ-GEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRL--AMVISIVLFSVGTLACGFAPGY-------- 108 (496)
T ss_pred HHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH--HHHHHHHHHHHHHHHHHHHhHH--------
Confidence 34445443 3455544 56667777889999999999999999988 3444544444444444333222
Q ss_pred CCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 345 GGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
+...+..++.|++.+...+....++.|.+|+++|++++++.+..
T Consensus 109 -------~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 152 (496)
T PRK03893 109 -------WTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISG 152 (496)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 35667778888888888888999999999999999988877664
No 206
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.59 E-value=1.4e-06 Score=85.52 Aligned_cols=142 Identities=14% Similarity=0.048 Sum_probs=80.8
Q ss_pred HHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcch-------HHHHHHHHHHHHH-HHhcCccHHHHHHHHHHH
Q 012965 63 LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKR-------ACVTYCLTYILSC-ITKHSPQYKILMIGRILG 134 (452)
Q Consensus 63 i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~-------~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~ 134 (452)
+.+++|.+..+.+.+.+...+.+.++.++.|+++||+|||+ .......+.++.. +....++.+...+.-++.
T Consensus 279 l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~ 358 (476)
T PLN00028 279 FYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILF 358 (476)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 34678999999998888877878888899999999998762 2222222223322 335566666666666666
Q ss_pred HhHhhhhhhhhhhhhhhhcc--cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHH
Q 012965 135 GIATSLLFSAFESWLVAEHN--KRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (452)
Q Consensus 135 G~~~~~~~~~~~~~~i~e~~--~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~ 212 (452)
+++.+...+...+ ++.+.. .++...+ ....+..+|+.+++.+.+. ....+|+..|...+++.+++.
T Consensus 359 ~~~~~~~~~~~~~-~~~~~~~~~~g~~~g--------~~~~~g~lg~~i~~~l~~~---~~~~~y~~~f~~~~~~~~i~~ 426 (476)
T PLN00028 359 SIFVQAACGATFG-IVPFVSRRSLGVISG--------LTGAGGNVGAVLTQLLFFT---GSSYSTETGISLMGVMIIACT 426 (476)
T ss_pred HHHHHHhhhhhcc-cCcccChhhchhhhh--------hhhccccHHHHHHHHHHHh---cCCccHhhHHHHHHHHHHHHH
Confidence 6665554444323 344432 2332222 1223344555555544321 112356677777666655554
Q ss_pred HHHH
Q 012965 213 VIIL 216 (452)
Q Consensus 213 ~~~~ 216 (452)
+...
T Consensus 427 ~~~~ 430 (476)
T PLN00028 427 LPVA 430 (476)
T ss_pred HHHH
Confidence 4443
No 207
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.57 E-value=3.6e-06 Score=77.50 Aligned_cols=126 Identities=13% Similarity=0.100 Sum_probs=84.5
Q ss_pred hcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHHhHhhhhhhh
Q 012965 66 TYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSA 144 (452)
Q Consensus 66 ~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~ 144 (452)
++|+++.+.+..++.......++....+++.||+|+||.+..+..+..++. +....++...+ ..-++.|++.+..+|.
T Consensus 172 ~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~ 250 (310)
T TIGR01272 172 ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAM-WFVLALGLFNSIMFPT 250 (310)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHHHH
Confidence 368999999988888888777888899999999999999888877777654 33444443333 3556889999999999
Q ss_pred hhhhhhhh-ccc-ccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHH
Q 012965 145 FESWLVAE-HNK-RGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAA 204 (452)
Q Consensus 145 ~~~~~i~e-~~~-r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~ 204 (452)
..+ ...+ ..+ .+...+ . . ....+|..+.|.+.+.+.|..+ .+..+++.
T Consensus 251 ~~s-~a~~~~~~~~~~asa----i----~-~~~~~Gg~i~P~l~G~lad~~g--~~~a~~v~ 300 (310)
T TIGR01272 251 IFS-LALNALGRHTSQGSG----I----L-CLAIVGGAIVPLLQGSLADCLG--IQLAFALP 300 (310)
T ss_pred HHH-HHHhhhhhhhhhhHH----H----H-HHHHhcchHHHHHHHHHHHhcc--chHHHHHH
Confidence 766 4433 322 222211 1 1 2233667777777777776544 34555543
No 208
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.57 E-value=9.3e-07 Score=83.47 Aligned_cols=96 Identities=18% Similarity=0.153 Sum_probs=71.4
Q ss_pred hhhHHHHHhhcCCCcchhHHHHHHHH-hhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhc-C----------cc
Q 012965 57 GPYVYYLYSTYGFGKGEIGQLFIAGF-GSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKH-S----------PQ 123 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~~g~~~~~~~-~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~-~----------~~ 123 (452)
....|...+++|.++.+.+.+..... ....++.+++|++.||+|||+.+..+.++.+++. +..+ . ++
T Consensus 229 ~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (356)
T TIGR00901 229 TVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPH 308 (356)
T ss_pred HHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccch
Confidence 34445555679999999987766443 4455666789999999999999988888777654 2222 1 45
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhhhhhhhc
Q 012965 124 YKILMIGRILGGIATSLLFSAFESWLVAEH 153 (452)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~ 153 (452)
.+.+..+.++.+++.+...+...+ ++.|.
T Consensus 309 ~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~ 337 (356)
T TIGR00901 309 LLMLFLTITLEAVTGGLGTVAFVA-FLSKL 337 (356)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHH-HHHHh
Confidence 677888899999999998888866 77766
No 209
>PRK10133 L-fucose transporter; Provisional
Probab=98.57 E-value=3.2e-06 Score=81.96 Aligned_cols=135 Identities=11% Similarity=0.053 Sum_probs=87.2
Q ss_pred hhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHHhHhhhhhh
Q 012965 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFS 143 (452)
Q Consensus 65 ~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~ 143 (452)
+++|.++.+.+..+....+...+++++.|++.||+|||+++..+..+.++.. +..+.++.+ -+..-.+.|++.+..+|
T Consensus 288 ~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i~P 366 (438)
T PRK10133 288 EIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQYP 366 (438)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHHH
Confidence 4689999999988888888778888899999999999999988877776654 334455543 24556789999999999
Q ss_pred hhhhhhhhhc--ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHH
Q 012965 144 AFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIG 211 (452)
Q Consensus 144 ~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~ 211 (452)
...+ ...|. ++.+...+.. . . ..+|..+++.+.+.+.+..+ +-+..|.+..+..+..
T Consensus 367 ~~~s-~a~~~~~~~~~~as~l~----~-~----~~~g~~~~~~i~G~l~~~~g-~~~~~~~v~~~~~~~~ 425 (438)
T PRK10133 367 TIFS-LGIKNLGQDTKYGSSFI----V-M----TIIGGGIVTPVMGFVSDAAG-NIPTAELIPALCFAVI 425 (438)
T ss_pred HHHH-HHHcccchhhccchhHH----h-H----HhccchHHHHHHHHHHHhcc-chHHHHHHHHHHHHHH
Confidence 9877 54443 2222322221 1 1 22344455555566555433 1345565544444433
No 210
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.56 E-value=5.6e-06 Score=80.38 Aligned_cols=57 Identities=21% Similarity=0.318 Sum_probs=43.5
Q ss_pred hhhHHHHH-hhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHH
Q 012965 57 GPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYI 113 (452)
Q Consensus 57 ~p~l~~i~-~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~ 113 (452)
...+|... +++|.+..+.+.........+.+.+++.|+++||+|||+.+..+..+.+
T Consensus 263 ~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~ 320 (432)
T PRK10406 263 TTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAA 320 (432)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHH
Confidence 34455554 5689998888877777677677888889999999999998877765543
No 211
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.56 E-value=6.3e-08 Score=89.61 Aligned_cols=97 Identities=14% Similarity=0.238 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHH
Q 012965 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (452)
Q Consensus 284 ~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 363 (452)
|.+.....+..++.+++.|++.||++|++ ++..+..+-.++.+...+..+. |.+.++-.+.|+
T Consensus 71 Gll~~vf~v~~~i~sPl~gyLadryNR~~--v~~vG~~iW~~Av~~~~fs~~F---------------wq~~l~R~~vGi 133 (493)
T KOG1330|consen 71 GLLQTVFIVVFMIASPLFGYLADRYNRKR--VIAVGIFIWTLAVFASGFSNHF---------------WQVLLCRGFVGI 133 (493)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhcCcce--EEeeHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHhcc
Confidence 78888899999999999999999999998 3666666666666665555444 688889999999
Q ss_pred HhhchhhHHHHHHhhcCCcccccchhhhhhhhhh
Q 012965 364 CVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLN 397 (452)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~ 397 (452)
|.+...|+.+++++|.+|+++|++++++.++..+
T Consensus 134 GeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ip 167 (493)
T KOG1330|consen 134 GEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIP 167 (493)
T ss_pred chhhhcccchhHhhhcCcchhhhHHHHHhhhhcc
Confidence 9999999999999999999999999999998643
No 212
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.56 E-value=1.3e-06 Score=82.57 Aligned_cols=134 Identities=10% Similarity=0.060 Sum_probs=80.8
Q ss_pred hhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCC
Q 012965 268 FLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKS 344 (452)
Q Consensus 268 ~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (452)
....|.+.+ +++.+. +...+...++..++++..|+++||+|||+ +....................
T Consensus 11 ~~~lp~i~~-~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~---~~~~~~~~~~~~~~~~~~~~~-------- 78 (368)
T TIGR00903 11 SPVLSLVAE-DIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRW---FLFGSLATFAAAAGRLLDPFN-------- 78 (368)
T ss_pred HhhHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchH---HHHHHHHHHHHHHHHHHHhcc--------
Confidence 334444443 344443 67777778899999999999999999876 333332222222111111011
Q ss_pred CCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhhh------hHHHHHHHhccccCCchHHHHH
Q 012965 345 GGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPL------NIFVCVVLYNVDAFPITVMFGM 418 (452)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~------~~~~~~~l~~~~~~~~~~~~~~ 418 (452)
....++.-++.|++.+. .+.......|.+|+++|++++++.+... +..++..+.+. .++...+..
T Consensus 79 ------~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~--~gWr~~f~~ 149 (368)
T TIGR00903 79 ------YEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTA--GGLQLLIIP 149 (368)
T ss_pred ------HHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--cchHHHHHH
Confidence 13567777788888875 4555666789999999999999877642 22444455544 344445544
Q ss_pred HHHH
Q 012965 419 CSIF 422 (452)
Q Consensus 419 ~~~~ 422 (452)
.++.
T Consensus 150 ~~~l 153 (368)
T TIGR00903 150 IAAV 153 (368)
T ss_pred HHHH
Confidence 3333
No 213
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.53 E-value=6.4e-07 Score=71.69 Aligned_cols=90 Identities=11% Similarity=0.119 Sum_probs=65.0
Q ss_pred HHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhch
Q 012965 289 TFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIF 368 (452)
Q Consensus 289 ~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 368 (452)
...++..++.++.+++.||+|||+. +........+........... +.......+.+++.+..
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~--~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~~~~~~ 68 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPV--LLVGLFIFVLSTAMFALSSNI---------------TVLIIARFLQGFGAAFA 68 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHH--HHHHHHHHHHHHHHHHHhccH---------------HHHHHHHHHHHHHHHHH
Confidence 3457788899999999999998873 444443434333332221111 35566778888888888
Q ss_pred hhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 369 WPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 369 ~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
.+..+.+..|..|+++|+++.+..+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (141)
T TIGR00880 69 LVAGAALIADIYPPEERGVALGLMSAG 95 (141)
T ss_pred HHhHHHHHHHHCChhhhhHHHHHHHHh
Confidence 899999999999999999999887764
No 214
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.52 E-value=2.2e-06 Score=74.26 Aligned_cols=140 Identities=16% Similarity=0.201 Sum_probs=87.7
Q ss_pred HhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH--HHhcCccHHHHHHHHHHHHhHhhh-
Q 012965 64 YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC--ITKHSPQYKILMIGRILGGIATSL- 140 (452)
Q Consensus 64 ~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~--l~~~~~~~~~l~~~r~l~G~~~~~- 140 (452)
.+.+|+|+...+.+.+..+..+...+|+.|.++||+|++...+.+..+..+.. ...+ +.+.=+.+..+.|++...
T Consensus 292 ~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsysll 369 (459)
T KOG4686|consen 292 QKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLSYSLL 369 (459)
T ss_pred HHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhHHHH
Confidence 47899999999999999999999999999999999999998888877665532 2232 222223445566665443
Q ss_pred ---hhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccC-CCcchhhHH-HHHHHHHHHHHH
Q 012965 141 ---LFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS-LGPVAPFDA-AACFLAIGMVII 215 (452)
Q Consensus 141 ---~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~-~~~~~~f~~-~~~~~~~~~~~~ 215 (452)
.+|.. +.++.| ++-|...+..+...+ +|..+.+++++.+.+..+ +.|.-.|.. .+.+.+....+.
T Consensus 370 AcslWP~v-a~~vpE-~qLGTaygf~qsIqN--------Lgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil 439 (459)
T KOG4686|consen 370 ACSLWPCV-ASLVPE-EQLGTAYGFIQSIQN--------LGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGIL 439 (459)
T ss_pred HHHHhhhh-hhhCCH-HHhcchHHHHHHHHh--------hhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 44444 324555 445555554444333 455556677777776554 556444443 344444433333
No 215
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.51 E-value=2e-06 Score=84.42 Aligned_cols=120 Identities=13% Similarity=0.075 Sum_probs=74.4
Q ss_pred hhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHh-----cCccHHHHHHHHHHHHhHh
Q 012965 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITK-----HSPQYKILMIGRILGGIAT 138 (452)
Q Consensus 65 ~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~-----~~~~~~~l~~~r~l~G~~~ 138 (452)
+....+....+.+.....+...++.+++++++||+|+|+.+..+..+..++. ... ..++.+.+++.-++.|++.
T Consensus 259 ~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~ 338 (473)
T PRK10429 259 TYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGT 338 (473)
T ss_pred EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHH
Confidence 3333344555555555545566777889999999999999998887766543 221 1445677777788889988
Q ss_pred hhhhhhhhhhhhhhc------ccccchhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 012965 139 SLLFSAFESWLVAEH------NKRGFEQQWLSITFSKAIFLGNGLVAILSGLF 185 (452)
Q Consensus 139 ~~~~~~~~~~~i~e~------~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l 185 (452)
+...+...+ +++|. +...++.+......+...-++.++|+.+.+.+
T Consensus 339 ~~~~~~~~a-m~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~ 390 (473)
T PRK10429 339 ALFWVLQVI-MVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVV 390 (473)
T ss_pred HHHHHHHHH-HHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888776644 65554 12223344444445555555555555544433
No 216
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.50 E-value=6.6e-06 Score=90.19 Aligned_cols=101 Identities=15% Similarity=0.141 Sum_probs=78.3
Q ss_pred HHHhhcCCCcc-hhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHHhHhh
Q 012965 62 YLYSTYGFGKG-EIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATS 139 (452)
Q Consensus 62 ~i~~~~g~s~~-~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G~~~~ 139 (452)
...+++|.+.. +.|++.+...++..+++++.|++.||+++|+.+.++.++.+++. +..+.++.+.+++..++.|++.+
T Consensus 258 ~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 337 (1146)
T PRK08633 258 YAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAG 337 (1146)
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 33467899988 88888877777777888899999999999999988888777765 55667788888889999999999
Q ss_pred hhhhhhhhhhhhhc---ccccchhhHH
Q 012965 140 LLFSAFESWLVAEH---NKRGFEQQWL 163 (452)
Q Consensus 140 ~~~~~~~~~~i~e~---~~r~~~~~~~ 163 (452)
...+...+ ++.+. +.|+...+..
T Consensus 338 ~~~~~~~~-~~~~~~p~~~rg~~~~~~ 363 (1146)
T PRK08633 338 LFIVPLNA-LIQFRAPEKELGKVLAAN 363 (1146)
T ss_pred HhhHHHHH-HHhhcCCccchhhhhHHH
Confidence 88777655 65554 4455555533
No 217
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.48 E-value=5e-06 Score=72.76 Aligned_cols=111 Identities=22% Similarity=0.199 Sum_probs=81.9
Q ss_pred hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HH--hc-----CccHHHHH
Q 012965 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT--KH-----SPQYKILM 128 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~--~~-----~~~~~~l~ 128 (452)
+.+-|++.+.+|+|.+|...+....-++.. .+++.|.+.||+|+|.++.++.+...+|. .. .. ..++|.+.
T Consensus 22 s~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~-~G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~ 100 (250)
T PF06813_consen 22 SAYSPQLKSRLGYSQSQLNTLSTAGDIGSY-FGILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMC 100 (250)
T ss_pred hhhhHHHHHHhCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHH
Confidence 566678999999999999988877777555 47889999999999999999999888874 22 21 24778888
Q ss_pred HHHHHHHhHhhhhhhhhhhhhhhhc-ccccchhhHHHHHHH
Q 012965 129 IGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFS 168 (452)
Q Consensus 129 ~~r~l~G~~~~~~~~~~~~~~i~e~-~~r~~~~~~~~~~~~ 168 (452)
+..++.|.+.+....++...-+.+. ++||...+......+
T Consensus 101 ~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~G 141 (250)
T PF06813_consen 101 LFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFG 141 (250)
T ss_pred HHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHH
Confidence 8888888876665454423234444 678887776655433
No 218
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.45 E-value=3.3e-06 Score=83.68 Aligned_cols=101 Identities=7% Similarity=0.012 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHH
Q 012965 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (452)
Q Consensus 284 ~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 363 (452)
+.+.+...++.+++.++.++++||+|||+. +..+..+..+........... .+ ....+..++.-++.|+
T Consensus 59 ~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~--~~~~~~~~~v~~~~~~~~~~~--------~~-~~~~~~~~~~r~l~G~ 127 (502)
T TIGR00887 59 AAVNGSASIGTLAGQLFFGWLADKLGRKRV--YGMELIIMIIATVASGLSPGS--------SP-KSVMATLCFWRFWLGV 127 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccHHH--HHHHHHHHHHHHHHHHHccCc--------cc-chHHHHHHHHHHHHHH
Confidence 566777788999999999999999999983 444444444433332222111 00 0011356788889999
Q ss_pred HhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 364 CVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
+.+...+....+..|.+|++.|+++.++.+..
T Consensus 128 ~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~ 159 (502)
T TIGR00887 128 GIGGDYPLSAIITSEFATKKWRGAMMAAVFAM 159 (502)
T ss_pred HHhhhhHHHHHHHHHhcChhhHHHHHHHHHHH
Confidence 99999999999999999999999999887764
No 219
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.44 E-value=2.4e-05 Score=69.96 Aligned_cols=301 Identities=13% Similarity=0.062 Sum_probs=163.6
Q ss_pred hhcCCCcchhH----HHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHHhHhh
Q 012965 65 STYGFGKGEIG----QLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATS 139 (452)
Q Consensus 65 ~~~g~s~~~~g----~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G~~~~ 139 (452)
.+.+++..|+. -+-+-.++...+ +.=.+.|..--|++++.-.+...... +.-+.++.+.+=+.-++.|...+
T Consensus 34 p~~NlT~~~l~~evyPvwTYSYLv~Lv---pvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tA 110 (433)
T KOG3810|consen 34 PDKNLTEDQLTNEVYPVWTYSYLVGLV---PVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATA 110 (433)
T ss_pred CCCCccHHHHhcccccchhHHHHHHHH---HHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHH
Confidence 45667766654 122223332222 34456898888888887776666665 55889999999889999999887
Q ss_pred hhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHH
Q 012965 140 LLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIIL 216 (452)
Q Consensus 140 ~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~ 216 (452)
....-- + ++-+. ++..+..+.-+. ....|...|..++.. +.....+.....=.+......+...+..
T Consensus 111 aEIAYy-s-YIYs~Vd~~~Yqrvt~y~Ra----A~L~g~~~g~vlaQl----Lvs~~~~sy~~LN~ISL~~~~ia~~~A~ 180 (433)
T KOG3810|consen 111 AEIAYY-S-YIYSKVDPEMYKRVTGYCRA----AFLVGKFVGSVLAQL----LVSLETLSYTTLNYISLAEVTIAVLLAL 180 (433)
T ss_pred HHHhhh-h-eeeeecCHHHHHHHHHHhHH----HHHHHhHHHhHHHHH----HhhhcccchhhhchhhHHHHHHHHHHHh
Confidence 774332 3 44333 333333332222 333344444444443 3332333333222333332223322222
Q ss_pred hccccccC-------CCC-------cc--h----h----HHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhcc
Q 012965 217 SSWTENYG-------DPS-------ES--K----D----LLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTP 272 (452)
Q Consensus 217 ~~~~~~~~-------~~~-------~~--~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 272 (452)
.+|..++ +++ +. + + ......++..+..++|+.+...+-..+...+ +..+.+|.-
T Consensus 181 -fLP~v~rSl~f~~~~~~~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg-~~QV~nY~Q 258 (433)
T KOG3810|consen 181 -FLPRVKRSLYFHRLEDKISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCG-YYQVTNYTQ 258 (433)
T ss_pred -hCCCCchhhhhhcccccceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhch-hHHHHHHHH
Confidence 3332221 000 00 0 0 0111223444556677776666555555544 333455544
Q ss_pred ccccCCCCCch----HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcc
Q 012965 273 ALSPNDEEIPH----GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGIS 348 (452)
Q Consensus 273 ~~~~~~~~~~~----~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (452)
..-++....+. |..=+...+.++++.+..|.+--++.|+....+..+....+....... .. ++
T Consensus 259 ~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~---~t--------~~-- 325 (433)
T KOG3810|consen 259 ILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMA---QT--------QH-- 325 (433)
T ss_pred HHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhh---cc--------cc--
Confidence 43333221111 555566667788888999998777776654333333222222222211 11 11
Q ss_pred cchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 349 FSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 349 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
.|...++..++...+....++....+++...++.-|..+|++.+.
T Consensus 326 --Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFv 370 (433)
T KOG3810|consen 326 --IWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFV 370 (433)
T ss_pred --eehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHH
Confidence 257889999999999988888888888988999999999985543
No 220
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.44 E-value=7.9e-06 Score=80.20 Aligned_cols=152 Identities=13% Similarity=0.006 Sum_probs=84.1
Q ss_pred hhHHHHH-hhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHH--------HHHHHHH--HHHHH-Hhc-CccH
Q 012965 58 PYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRAC--------VTYCLTY--ILSCI-TKH-SPQY 124 (452)
Q Consensus 58 p~l~~i~-~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l--------~~~~~~~--~i~~l-~~~-~~~~ 124 (452)
..+|... +++|.+..+.|...+..++.+.+++++.|+++||+++|+.. ..+.... ++..+ ... ..+.
T Consensus 282 ~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (465)
T TIGR00894 282 TYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAF 361 (465)
T ss_pred HHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCch
Confidence 3445554 56899999999888888888888889999999998755321 1111111 11111 122 3344
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCC-cchhhHH
Q 012965 125 KILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLG-PVAPFDA 203 (452)
Q Consensus 125 ~~l~~~r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~-~~~~f~~ 203 (452)
...++.-.+.+.+.+...+.... ...|..++ ..+. ..........+++.++|.+.+.+.+..+++ |+..|.+
T Consensus 362 ~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~--~~g~----~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~ 434 (465)
T TIGR00894 362 YLTIIILTLANAVSSGPLAGVLI-NSLDLAPR--FLGF----IKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLI 434 (465)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhh-chhhcChh--HHHH----HHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHH
Confidence 44444444555444444333211 22232222 2222 222333344577788888877776644443 6777877
Q ss_pred HHHHHHHHHHHHH
Q 012965 204 AACFLAIGMVIIL 216 (452)
Q Consensus 204 ~~~~~~~~~~~~~ 216 (452)
.++..++..++..
T Consensus 435 ~~~~~~i~~i~~~ 447 (465)
T TIGR00894 435 MAFVNILCVIFYL 447 (465)
T ss_pred HHHHHHHHHHHee
Confidence 7766666554433
No 221
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.43 E-value=3.2e-06 Score=83.03 Aligned_cols=93 Identities=15% Similarity=0.173 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHH
Q 012965 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (452)
Q Consensus 284 ~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 363 (452)
.++.....++..++.++.|+++|.+|||. ..+.+..+..++.++.....+. -..+.+..+.|+
T Consensus 81 ~w~~~~~~l~~av~~~~~G~LSDlfGRr~--~~i~g~~l~vvG~Iv~atA~~~---------------~~~iag~~l~Gv 143 (599)
T PF06609_consen 81 SWFSTAWTLASAVSFPFVGRLSDLFGRRY--FFIIGSLLGVVGSIVCATAQNM---------------NTFIAGMVLYGV 143 (599)
T ss_pred hHHHHHHHHHHHHHHHhhHHHHHHhcchH--HHHHHHHHHHhHHHHhhcCCcH---------------HHHHHHHHHHHH
Confidence 56667777889999999999999999998 3445555555555543322222 256788889898
Q ss_pred HhhchhhHHHHHHhhcCCcccccchhhhhhh
Q 012965 364 CVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (452)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (452)
+.|... .....++|..|.+.|..+.++...
T Consensus 144 gaG~~~-~~~~~isEl~p~k~R~~~~~~~~~ 173 (599)
T PF06609_consen 144 GAGVQE-LAALAISELVPNKWRGLGLAIASI 173 (599)
T ss_pred hhHHHH-HHHHHHHHhcccchhhhHhHHHHH
Confidence 877544 456668999999999877765554
No 222
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.43 E-value=2.8e-06 Score=78.21 Aligned_cols=147 Identities=16% Similarity=0.084 Sum_probs=99.7
Q ss_pred hhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHHH-HhcCccHHHHHHHHHHHHhHhhhhhh
Q 012965 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGGIATSLLFS 143 (452)
Q Consensus 65 ~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~l-~~~~~~~~~l~~~r~l~G~~~~~~~~ 143 (452)
+++|++..++..+.....+.+.+++.+.|++.||+|.|+++..+.++..+.++ .-+...-..+.++-.+.|.+.|....
T Consensus 281 ~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA 360 (438)
T COG2270 281 ADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQA 360 (438)
T ss_pred HHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHH
Confidence 58999999998887777788889999999999999999999999999988663 34455556667777899999999999
Q ss_pred hhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHhccc
Q 012965 144 AFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWT 220 (452)
Q Consensus 144 ~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 220 (452)
.+.+ +..+. ++.++..+ .+++.-- .+..++|.+.+.+.+..+ .-|.-+....++..+...... +.|
T Consensus 361 ~SRS-y~~~lvp~~k~~~fFg----lyaltgr----a~S~~gp~lv~v~t~iTg-~~r~g~~~i~vll~iGl~~L~-~v~ 429 (438)
T COG2270 361 SSRS-YLARLVPKGKEGRFFG----LYALTGR----AASFLGPFLVAVITQITG-SSRAGVLSIIVLLLIGLLLLL-RVK 429 (438)
T ss_pred HHHH-HHHHhCCCccccceee----hhhhhhh----HHHHHHHHHHHHHHHHhc-chhhHHHHHHHHHHhhHhhEE-eec
Confidence 9988 76665 44444444 2333333 334455555554444333 235445544444444444333 444
Q ss_pred cc
Q 012965 221 EN 222 (452)
Q Consensus 221 ~~ 222 (452)
++
T Consensus 430 ~~ 431 (438)
T COG2270 430 VP 431 (438)
T ss_pred CC
Confidence 43
No 223
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.43 E-value=7.9e-05 Score=69.62 Aligned_cols=302 Identities=17% Similarity=0.117 Sum_probs=148.7
Q ss_pred HHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc
Q 012965 75 GQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH 153 (452)
Q Consensus 75 g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~ 153 (452)
+.+...-.+.+.+.-..+.+..+|...+.-......+..++. +.++++|.+.=+++-.+.+++.|........ +.+-.
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~-lt~~y 140 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLS-LTHFY 140 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHH-HHHhc
Confidence 344444444555555567778888876555666666777776 5589999998889999999998887776645 54433
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHhcc--ccccCCC-----
Q 012965 154 NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSW--TENYGDP----- 226 (452)
Q Consensus 154 ~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~--~~~~~~~----- 226 (452)
+++. .. .++. |.+.++++|+..-..+.+ .++..|..+.....+.++.....+..+ |+.+.+.
T Consensus 141 ~~~~-l~-----~wss----GTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~ 209 (402)
T PF02487_consen 141 GKSS-LS-----AWSS----GTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESES 209 (402)
T ss_pred Cccc-cc-----cccC----CcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCC
Confidence 3221 11 2332 344444444444333333 456556666665554433322222122 2211100
Q ss_pred -Ccchh-HHH----------HHHHhhH-HhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCch----HHHHHH
Q 012965 227 -SESKD-LLT----------QFRGAAV-AIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH----GFIFAT 289 (452)
Q Consensus 227 -~~~~~-~~~----------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~----~~~~~~ 289 (452)
++.++ ..+ +.+...+ +..+-++.+...+-....+..-|.......|...-.....+. ......
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~Y~~~ 289 (402)
T PF02487_consen 210 EDEAEDDLLESETSESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRWYQLL 289 (402)
T ss_pred CCcccccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHHHHHH
Confidence 00000 000 0000111 111112222233333444444444333344443321112222 233344
Q ss_pred HHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchh
Q 012965 290 FMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFW 369 (452)
Q Consensus 290 ~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 369 (452)
+.++..+++--...+ |+ |+...+.+.-.+-.+.++.-...... ...|...+..+.-|+.-|..+
T Consensus 290 YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fi------------psi~ivf~lif~eGLlGGa~Y 353 (402)
T PF02487_consen 290 YQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFI------------PSIWIVFVLIFYEGLLGGASY 353 (402)
T ss_pred HHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHh------------hHHHHHHHHHHHHHHhhhHHH
Confidence 556655555332221 23 33212211111212222221111111 112456666777788888888
Q ss_pred hHHHHHHhhcCCcccccchhhhhhhh--hhHHHHHHH
Q 012965 370 PSIMKMRSQYIPEEARSTIMNFFRIP--LNIFVCVVL 404 (452)
Q Consensus 370 ~~~~~~~~~~~p~~~r~~~~g~~~~~--~~~~~~~~l 404 (452)
...+..+.|..|+++|--++|..+.+ .|+.+++.+
T Consensus 354 VNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll 390 (402)
T PF02487_consen 354 VNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLL 390 (402)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 88888889999999999988887765 555555544
No 224
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.42 E-value=5.8e-06 Score=79.44 Aligned_cols=113 Identities=12% Similarity=0.099 Sum_probs=79.8
Q ss_pred hhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCC
Q 012965 268 FLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKS 344 (452)
Q Consensus 268 ~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (452)
....|.+ ++.++.+. +...+...++..++++..+++.||+|||+. +..+..+..++..........
T Consensus 23 ~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~--~~~g~~l~~~g~~l~~~~~~~-------- 91 (410)
T TIGR00885 23 NPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAG--ILLGLFLYALGAFLFWPAAEI-------- 91 (410)
T ss_pred HHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHH--HHHHHHHHHHHHHHHHHHHhh--------
Confidence 3455555 44556554 677788889999999999999999999983 555555555554443222111
Q ss_pred CCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 345 GGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
++ .+..++..++.|++.+...+..+.++.+..|+++|++..++.+..
T Consensus 92 ~~----~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (410)
T TIGR00885 92 MN----YTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSF 138 (410)
T ss_pred cc----HHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHH
Confidence 00 135667778889999999999999999999999888887776553
No 225
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.40 E-value=5.1e-06 Score=75.21 Aligned_cols=105 Identities=19% Similarity=0.133 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHH
Q 012965 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (452)
Q Consensus 284 ~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 363 (452)
|.+.+.+++...+.++.+|.++||+|||+. +..+.....+...+.. ...+. ..++++=++.|+
T Consensus 71 GflGSsF~ilQ~~sS~~~G~~SD~yGRkpv--ll~c~~~va~s~ll~~-~S~~F--------------~afv~aR~l~Gi 133 (451)
T KOG2615|consen 71 GFLGSSFSILQFISSPLWGCLSDRYGRKPV--LLACLIGVALSYLLWA-LSRNF--------------AAFVLARFLGGI 133 (451)
T ss_pred hhHhhHHHHHHHHhhhhhhhhhhhhCchHH--HHHHHHHHHHHHHHHH-HHHHH--------------HHHHHHHHhhhh
Confidence 788889999999999999999999999983 4444444344333322 22220 133333455555
Q ss_pred HhhchhhHHHHHHhhcCCcccccchhhhhhhh------hhHHHHHHHhc
Q 012965 364 CVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYN 406 (452)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~ 406 (452)
.-+ ...+..++++|.+++++|+.+++..+.+ .|+.+|+.+..
T Consensus 134 ~kg-nl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 134 FKG-NLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred ccC-chHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 555 4467889999999999999999887774 45577777655
No 226
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.38 E-value=8e-05 Score=75.05 Aligned_cols=154 Identities=14% Similarity=0.216 Sum_probs=99.8
Q ss_pred hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccc-cCcchHHHHHHHHHHHHH-HHhcCc--------cHHH
Q 012965 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCLTYILSC-ITKHSP--------QYKI 126 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr-~Grr~~l~~~~~~~~i~~-l~~~~~--------~~~~ 126 (452)
..+...+.+.+|.+.++...++........+.+.++|.++|+ +||++++..+.++..++. +.+++. ....
T Consensus 8 aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~ 87 (654)
T TIGR00926 8 TILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLL 87 (654)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHH
Confidence 344445667789888888777766666677777889999996 699999999999988875 444321 1234
Q ss_pred HHHHHHHHHhHhhhhhhhhhhhhhhhc-cc--ccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccc-----CCCcc
Q 012965 127 LMIGRILGGIATSLLFSAFESWLVAEH-NK--RGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF-----SLGPV 198 (452)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~e~-~~--r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~-----~~~~~ 198 (452)
.+++-.+..+|.|+.-|...+ ...|. ++ +.++.+. ++..+.. ..+|..+++.+..++.+.. .++|.
T Consensus 88 ~l~gLaLia~G~GgiKp~vsa-f~gdqf~~~~~~~~~s~----F~~fY~~-iNiGSlis~~i~~~l~~~~~~fg~~~~~~ 161 (654)
T TIGR00926 88 DLLGLALIALGTGGIKPCVSA-FGGDQFEERQLSLRSRF----FSFFYFA-INAGSLISTIITPILRGDVGCFGCQDCYP 161 (654)
T ss_pred HHHHHHHHHhhccccccCchh-hhHhhcCccchhHHHHH----HHHHHHH-HHHHHHHHHHHHHHHHHhhcccccCcchH
Confidence 567778888899998888756 77765 22 2233333 3333332 2355555555555544321 13577
Q ss_pred hhhHHHHHHHHHHHHHHH
Q 012965 199 APFDAAACFLAIGMVIIL 216 (452)
Q Consensus 199 ~~f~~~~~~~~~~~~~~~ 216 (452)
..|.+.++..+++.+...
T Consensus 162 ~aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 162 LAFGVPAILMILALIVFM 179 (654)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888888777776655544
No 227
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.37 E-value=1.6e-05 Score=76.23 Aligned_cols=162 Identities=18% Similarity=0.136 Sum_probs=96.1
Q ss_pred hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHh---c-CccH--H---H
Q 012965 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITK---H-SPQY--K---I 126 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~---~-~~~~--~---~ 126 (452)
.-+...+.++-|++..+..++......+..+...++..+.||+|||+.++.+..+..+.. ++. + .+.. | .
T Consensus 290 ~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~ 369 (485)
T KOG0569|consen 290 FFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYL 369 (485)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 444457778899998877777666666666777789999999999999999998887753 321 1 1112 1 2
Q ss_pred HHHHHHHHHhHhhhhhhhhhhh-hhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHH
Q 012965 127 LMIGRILGGIATSLLFSAFESW-LVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAA 205 (452)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~-~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~ 205 (452)
.+++.++..++.+...... ++ +.+|.-+++.+....+.... ...+.+.+-...-+.+-.. +|- +.|....
T Consensus 370 ~i~~~~~~~~~f~~G~gpi-~~fi~aELf~~~~R~aa~s~~~~-~~w~~~fiv~~~fp~l~~~------~g~-~~filF~ 440 (485)
T KOG0569|consen 370 CIAAIFLFIISFAIGPGPI-PWFIGAELFPQSARSAAQSVATA-VNWLSNFIVGFAFPPLQNV------IGP-YVFILFV 440 (485)
T ss_pred HHHHHHHHHHhhhcCCCch-hHHHHHHhCCccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHH------hcc-hhhHHHH
Confidence 2344455555444432222 33 46777555555543333222 2222232222333333322 332 5566666
Q ss_pred HHHHHHHHHHHhccccccCCCC
Q 012965 206 CFLAIGMVIILSSWTENYGDPS 227 (452)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~ 227 (452)
+...+..+..++.+||+++++.
T Consensus 441 i~~~~~~i~~~~~lPETkgr~~ 462 (485)
T KOG0569|consen 441 IPLAIFLIYLYRYLPETKGRTP 462 (485)
T ss_pred HHHHHHHHHHHHhCcccCCCCH
Confidence 6667777777789999987654
No 228
>PRK11462 putative transporter; Provisional
Probab=98.37 E-value=4.3e-05 Score=74.62 Aligned_cols=112 Identities=8% Similarity=-0.060 Sum_probs=61.5
Q ss_pred hhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHH-HHHHhcC--ccHHHHHHHHHHHHhHhhhhhhhhhhhh
Q 012965 73 EIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL-SCITKHS--PQYKILMIGRILGGIATSLLFSAFESWL 149 (452)
Q Consensus 73 ~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i-~~l~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~~ 149 (452)
..+.+.....+.+.++.+++++++||+|+|+.+..+..+.++ +.+..+. ++.+.+++.-++.|++.+...+...+ +
T Consensus 264 ~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~-m 342 (460)
T PRK11462 264 VFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWV-M 342 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 344444555555667777899999999999987765554444 2222222 22334445556677776665544333 4
Q ss_pred hhhc------ccccchhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 012965 150 VAEH------NKRGFEQQWLSITFSKAIFLGNGLVAILSGLF 185 (452)
Q Consensus 150 i~e~------~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l 185 (452)
++|. +...++.+......+...-+|.++|..+++.+
T Consensus 343 ~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~i 384 (460)
T PRK11462 343 MSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWM 384 (460)
T ss_pred HHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4433 22233334333344455555666666555444
No 229
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.36 E-value=1.6e-05 Score=75.43 Aligned_cols=114 Identities=17% Similarity=0.170 Sum_probs=74.0
Q ss_pred CCCcchhHHHHHHHHhhhhhc-cccccccccccCcchHHHHHHHHHHHHH-HHhc--CccHHHHHHHHHHHHhHhhhhhh
Q 012965 68 GFGKGEIGQLFIAGFGSSMLF-GTIVGSLADKQGRKRACVTYCLTYILSC-ITKH--SPQYKILMIGRILGGIATSLLFS 143 (452)
Q Consensus 68 g~s~~~~g~~~~~~~~~~~l~-~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~--~~~~~~l~~~r~l~G~~~~~~~~ 143 (452)
|.+..+........ ..+.+. .+++.++.+|+|+|+++..+.++.+++. +.-+ .++.+.+++..++.+++.+...+
T Consensus 268 g~~~l~~~~~~~~~-~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~ 346 (467)
T COG2211 268 GDPELFAYLLLLAS-GAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANP 346 (467)
T ss_pred CChHHHHHHHHHHH-HHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhcccc
Confidence 33333333343333 334444 5679999999999999999999998875 4333 45788889999999999998887
Q ss_pred hhhhhhhhhc------ccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 012965 144 AFESWLVAEH------NKRGFEQQWLSITFSKAIFLGNGLVAILSG 183 (452)
Q Consensus 144 ~~~~~~i~e~------~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~ 183 (452)
..-+ +++|. +...++.+...+.++...=+|.+++..+.+
T Consensus 347 l~wa-m~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g 391 (467)
T COG2211 347 LPWA-MVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPG 391 (467)
T ss_pred ccHH-HhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 7645 54433 334445555555555555555555554433
No 230
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.35 E-value=4.1e-06 Score=76.25 Aligned_cols=125 Identities=18% Similarity=0.164 Sum_probs=94.2
Q ss_pred CchHHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHH
Q 012965 281 IPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCT 360 (452)
Q Consensus 281 ~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (452)
...|.+++...+.+++.+++.|.+.||+|+|. .+..+..+.....++..+.... +..+++-.+
T Consensus 106 ~~iG~LFaskA~~qllvnp~~G~l~~~iGy~i--pm~~Gl~vmf~sTilFafg~sy---------------~~l~vAR~L 168 (464)
T KOG3764|consen 106 TQIGLLFASKALVQLLVNPFFGNLIDRIGYKI--PMVAGLFVMFLSTILFAFGNSY---------------PMLFVARSL 168 (464)
T ss_pred cchhHHHHHHHHHHHHhcccchhhHHHhcccc--HHHHHHHHHHHHHHHHHHcchh---------------HHHHHHHHH
Confidence 34489999999999999999999999999987 3666777766666665554444 477888889
Q ss_pred HHHHhhchhhHHHHHHhhcCCccc-ccchhhhhhhh------hhHHHHHHHhccccCCchHHHHHHHHHHH
Q 012965 361 FEACVGIFWPSIMKMRSQYIPEEA-RSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGMCSIFLL 424 (452)
Q Consensus 361 ~g~~~~~~~~~~~~~~~~~~p~~~-r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 424 (452)
.|++.+..+....++++|.+|++. |++++|+.-.. .++.+|+.+++..|.. .-|.+++++++
T Consensus 169 QgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~--aPFlVL~~v~L 237 (464)
T KOG3764|consen 169 QGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKS--APFLVLAIVLL 237 (464)
T ss_pred hhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCc--CcHHHHHHHHH
Confidence 999999999999999999999887 79988775432 3456678888874443 33444444433
No 231
>TIGR00898 2A0119 cation transport protein.
Probab=98.32 E-value=6e-06 Score=81.99 Aligned_cols=95 Identities=16% Similarity=0.277 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHH
Q 012965 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (452)
Q Consensus 284 ~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 363 (452)
+...+...++.+++.++.|+++||+|||+ .+..+..+..+..+...+.... +...+..++.|+
T Consensus 130 ~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~--~~~~~~~~~~i~~~~~~~~~~~---------------~~~~~~r~l~G~ 192 (505)
T TIGR00898 130 DLTQSCFFVGVLLGSFVFGYLSDRFGRKK--VLLLSTLVTAVSGVLTAFSPNY---------------TVFLVFRLLVGM 192 (505)
T ss_pred HHHHHHHHHHHHHHHHhHHHhhhhccchH--HHHHHHHHHHHHHHHHHHcccH---------------HHHHHHHHHHHh
Confidence 67778888999999999999999999998 3444444444444443332222 466777888999
Q ss_pred HhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 364 CVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
+.+...+...+++.|.+|+++|+.+.++.+..
T Consensus 193 ~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~ 224 (505)
T TIGR00898 193 GIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVF 224 (505)
T ss_pred hccchHHHHHHHhheecChhhhHHHHHHHHHH
Confidence 99988999999999999999999988876543
No 232
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.31 E-value=2.8e-05 Score=85.13 Aligned_cols=105 Identities=10% Similarity=-0.112 Sum_probs=75.8
Q ss_pred HHHHH-hhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcC----------------
Q 012965 60 VYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS---------------- 121 (452)
Q Consensus 60 l~~i~-~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~---------------- 121 (452)
+|... +.+|.++.+.|.+.+...++..+++++.|+++||.++++.+..+.++.++.. ...+.
T Consensus 248 ~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 327 (1140)
T PRK06814 248 LPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILV 327 (1140)
T ss_pred hHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhh
Confidence 34444 5689999999988888878778888899999998888777666665555432 23322
Q ss_pred ----ccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHH
Q 012965 122 ----PQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSI 165 (452)
Q Consensus 122 ----~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~ 165 (452)
++.+.+.+..++.|++.+...+...+ ++.+. +.+++..+..+.
T Consensus 328 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~p~~~~G~v~g~~~~ 377 (1140)
T PRK06814 328 FLSKRHGWRILIDLFGLAAAGGLYIVPLFA-ALQAWANPAHRARVIAANNV 377 (1140)
T ss_pred hhcccccHHHHHHHHHHHHHHHHhHHHHHH-HHHhhCCcccceeeeHHHHH
Confidence 67788888899999999988877655 65554 566776664443
No 233
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.30 E-value=2.6e-06 Score=86.07 Aligned_cols=125 Identities=10% Similarity=0.061 Sum_probs=84.3
Q ss_pred hhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCc--
Q 012965 268 FLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNV-- 342 (452)
Q Consensus 268 ~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 342 (452)
...++.+ ++.++.+. |.+.+.+.++..++.++.+++.||.|||+ ++..+.++.+++.++.........++..
T Consensus 53 ~~~l~~i-ek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~--~i~~g~ll~~lg~ll~alphf~~~~y~~~~ 129 (633)
T TIGR00805 53 NSSLTTI-ERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPI--VIGIGCAIMGLGSFLLSLPHFLSGRYSYST 129 (633)
T ss_pred Hhhchhh-hhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcce--EEEecHHHHHHHHHHHhChHHhcCCccccc
Confidence 3344443 34455543 77788888999999999999999999888 3666666666665554332211100000
Q ss_pred -----------------------------C-----CCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccch
Q 012965 343 -----------------------------K-----SGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTI 388 (452)
Q Consensus 343 -----------------------------~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~ 388 (452)
+ +.+.......++++-++.|++.+..++...+++.|.+|+++|+..
T Consensus 130 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~ 209 (633)
T TIGR00805 130 TVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLY 209 (633)
T ss_pred cccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHH
Confidence 0 000011224566789999999999999999999999999999999
Q ss_pred hhhhhhh
Q 012965 389 MNFFRIP 395 (452)
Q Consensus 389 ~g~~~~~ 395 (452)
.|+.+..
T Consensus 210 ~~i~~~~ 216 (633)
T TIGR00805 210 IGILESI 216 (633)
T ss_pred HHHHHHH
Confidence 9887764
No 234
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.25 E-value=2.9e-05 Score=73.70 Aligned_cols=104 Identities=7% Similarity=-0.068 Sum_probs=80.6
Q ss_pred cccCCCCCch----HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCccc
Q 012965 274 LSPNDEEIPH----GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISF 349 (452)
Q Consensus 274 ~~~~~~~~~~----~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (452)
++.+.++.+. |.+......+..+..+++|+++||+|.|+ .+....+.-++...+..+....
T Consensus 51 ~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~--vL~l~~l~Wsl~t~L~~fa~Sl------------- 115 (511)
T TIGR00806 51 YLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKP--VLVLQALSFVCVWLLLLLGTSV------------- 115 (511)
T ss_pred HHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchH--HHHHHHHHHHHHHHHHHHHHHH-------------
Confidence 3333455543 67788888999999999999999999888 3555555555555555544333
Q ss_pred chhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 350 SGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 350 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
..+.+.-+++|++.+..+ ....++.+.+|+++|+++.|+.+.+
T Consensus 116 --~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg 158 (511)
T TIGR00806 116 --WHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAA 158 (511)
T ss_pred --HHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 467788899999999888 8999999999999999999998875
No 235
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.25 E-value=1.6e-05 Score=77.66 Aligned_cols=93 Identities=16% Similarity=0.046 Sum_probs=69.7
Q ss_pred hhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHh-c---------CccHHHHHHHHHH
Q 012965 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITK-H---------SPQYKILMIGRIL 133 (452)
Q Consensus 65 ~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~-~---------~~~~~~l~~~r~l 133 (452)
+++|.++.++|.+.....+...++....+++.+|++.|+++..+.++.+++. ... . .++.+.+...-++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 5789999999988887777777777889999999999999999999988864 221 1 1444455666788
Q ss_pred HHhHhhhhhhhhhhhhhhhcccccc
Q 012965 134 GGIATSLLFSAFESWLVAEHNKRGF 158 (452)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~e~~~r~~ 158 (452)
.+++.+........ ++.+..+++.
T Consensus 361 ~~~~~g~~~~~~~~-~~~~~~p~~~ 384 (468)
T TIGR00788 361 AEVLAQLKFMPFLV-LLARLCPSGC 384 (468)
T ss_pred HHHHHHHHHccHHH-HHHHhCCCCc
Confidence 88888887777645 6666633333
No 236
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.24 E-value=0.00011 Score=66.51 Aligned_cols=156 Identities=15% Similarity=0.067 Sum_probs=99.0
Q ss_pred HhhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhcccccccccccc-CcchHHHHHHHHHHHHH-HHhcCccHHHHH
Q 012965 51 AGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCLTYILSC-ITKHSPQYKILM 128 (452)
Q Consensus 51 ~~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~-Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~ 128 (452)
...+....-+|.+..|-|+|..+.|++.+...+.+...+.....+++|. ++|+..+....++.++. -+.+.+.-..+.
T Consensus 222 ~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~l 301 (395)
T COG2807 222 LLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPIL 301 (395)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 3344446677899999999999999888888877777777788888864 56777776666666664 334544333333
Q ss_pred HHHHHHHhHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHH
Q 012965 129 IGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFL 208 (452)
Q Consensus 129 ~~r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~ 208 (452)
. -++.|+|.|..++.+.. ++.+..+..+..+.. ......+|+.+ ...+|.+.+++-|..+ +|+.+........
T Consensus 302 w-~~llG~G~G~~F~laL~-li~~rs~~a~~Aa~L---SgmaQg~GYll-Aa~GP~l~G~lhDa~g-sw~~~~~~l~~~~ 374 (395)
T COG2807 302 W-ALLLGLGQGGAFPLALT-LILLRSSDAAIAAAL---SGMAQGVGYLL-AAFGPWLFGFLHDATG-SWSAPLVLLALAT 374 (395)
T ss_pred H-HHHHhCccchHHHHHHH-HHHhhcCChHHHHHH---HHHhhhhhHHH-HhhhhhhHhHHHHhcC-ChHHHHHHHHHHH
Confidence 2 48999999999999866 666653333333322 22233344433 2566677777766443 4565555544444
Q ss_pred HHHHH
Q 012965 209 AIGMV 213 (452)
Q Consensus 209 ~~~~~ 213 (452)
+...+
T Consensus 375 i~m~i 379 (395)
T COG2807 375 LLMLI 379 (395)
T ss_pred HHHHH
Confidence 44333
No 237
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.23 E-value=7.7e-05 Score=68.28 Aligned_cols=102 Identities=25% Similarity=0.333 Sum_probs=75.4
Q ss_pred hhhhhhHHHHHhhcCCCc--chhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCcc--HHHHH
Q 012965 54 WLQGPYVYYLYSTYGFGK--GEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQ--YKILM 128 (452)
Q Consensus 54 ~~~~p~l~~i~~~~g~s~--~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~--~~~l~ 128 (452)
....+..+...++++.+. .+.+...........+..++.|.++||+|||+.+..+.....++. ++++.++ .+.++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (338)
T COG0477 19 GLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLL 98 (338)
T ss_pred chHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHH
Confidence 333556666777777665 367777677666666666889999999999988888877655543 4455554 89999
Q ss_pred HHHHHHHhHhhhhhhhhhhhhhhhcccc
Q 012965 129 IGRILGGIATSLLFSAFESWLVAEHNKR 156 (452)
Q Consensus 129 ~~r~l~G~~~~~~~~~~~~~~i~e~~~r 156 (452)
+.|+.+|++.+...+...+ ++.|..++
T Consensus 99 ~~~~~~g~~~~~~~~~~~~-~~~~~~~~ 125 (338)
T COG0477 99 ILRLLQGLGGGGLLPVASA-LLSEWFPE 125 (338)
T ss_pred HHHHHHHhhhHHHHHHHHH-HHHHhcCc
Confidence 9999999999988888756 77777443
No 238
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.21 E-value=1.5e-05 Score=75.18 Aligned_cols=175 Identities=14% Similarity=0.154 Sum_probs=107.3
Q ss_pred hhcchhHHHHHHHHHhhhchhhhhhhhhccccc----cCCCCCchHHHH---HHHHHHHHHHhHHHHHHhccC-CCCchh
Q 012965 243 IASDEKIALLGAIQSLFEGSMYTFVFLWTPALS----PNDEEIPHGFIF---ATFMLASMLGSSLASRLMARS-PPRVES 314 (452)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~----~~~~~~~~~~~~---~~~~i~~~~~~~~~g~l~dr~-g~~~~~ 314 (452)
.+++||-+...+..=+..-..|+.+...+-.|+ .++.+.+++... ..+..-.-+..+++||++||+ |+|++
T Consensus 16 ~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t- 94 (498)
T COG3104 16 FFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT- 94 (498)
T ss_pred cCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH-
Confidence 355666555555444443222322333333333 334557664333 344444556778999999995 77773
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCccc--ccchhhhh
Q 012965 315 YMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA--RSTIMNFF 392 (452)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~--r~~~~g~~ 392 (452)
+..+.++..++.+.+.... ...+ ..+.+++.+.++|.|..-|...++..|.+|++. |-.++++.
T Consensus 95 -I~lGail~~iGh~~L~~~~-~~~~------------~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~f 160 (498)
T COG3104 95 -IVLGAILMAIGHLVLAISS-VSGP------------GGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLF 160 (498)
T ss_pred -HHHHHHHHHHHHHHHhccc-cccc------------cHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEE
Confidence 6677777777666655432 0011 267888888889999999999999999998876 45555555
Q ss_pred hhhh------hHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHhhh
Q 012965 393 RIPL------NIFVCVVLYNVDAFPITVMFGMCSIFLLVASVLQRRLM 434 (452)
Q Consensus 393 ~~~~------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (452)
.++. ++.+.+++.+. +++...|..+++-.....+.....+
T Consensus 161 Y~~iNiGsl~~p~i~~~~~~~--~g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 161 YMGINIGSLIAPIITGLLAIN--YGWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred EEEeehHHHHHHHHHHHHHHh--hCHHHHHHHHHHHHHHHHHHHHHcc
Confidence 5543 33444555554 5577777777777766665554443
No 239
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.19 E-value=3.6e-06 Score=59.02 Aligned_cols=67 Identities=22% Similarity=0.224 Sum_probs=56.1
Q ss_pred HHHHHHhhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHH
Q 012965 46 YSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTY 112 (452)
Q Consensus 46 ~~~~~~~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~ 112 (452)
+++...+.+...|+++...++.|+|+.|+|.+.++......+..|++|.++||+++++..+....+.
T Consensus 9 yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 9 YFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 3444445556689998888999999999999999999999999999999999999999887766543
No 240
>PTZ00207 hypothetical protein; Provisional
Probab=98.08 E-value=4.1e-05 Score=75.76 Aligned_cols=116 Identities=13% Similarity=-0.050 Sum_probs=71.5
Q ss_pred hhhccccccCCCCCchHHHHHHHHH--HHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCC
Q 012965 268 FLWTPALSPNDEEIPHGFIFATFML--ASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSG 345 (452)
Q Consensus 268 ~~~~p~~~~~~~~~~~~~~~~~~~i--~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (452)
..+.|.+ ++.++.+...+..+..+ ......++.|++.||+|+|+ .+.++.....++.....+....
T Consensus 47 sv~s~~L-~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R~--vllig~ll~~iG~ll~ala~~~--------- 114 (591)
T PTZ00207 47 NLISGAM-QARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPRP--IFVLSMTVFCLGTLLFALTFQE--------- 114 (591)
T ss_pred HHHHHHH-HHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH--HHHHHHHHHHHHHHHHHHHhcc---------
Confidence 4445543 44566666433322222 22335567899999999988 3556666666655554432111
Q ss_pred CcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhhh
Q 012965 346 GISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPL 396 (452)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~ 396 (452)
......+.+.+..++.|++.+..++.....+.+.+| ++||++.|+.....
T Consensus 115 ~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~ 164 (591)
T PTZ00207 115 VIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFT 164 (591)
T ss_pred cccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHH
Confidence 001112455667778888888777778888899997 56899998877653
No 241
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.04 E-value=8.1e-05 Score=72.89 Aligned_cols=149 Identities=17% Similarity=0.115 Sum_probs=106.2
Q ss_pred hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccC--cchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHH
Q 012965 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQG--RKRACVTYCLTYILSC-ITKHSPQYKILMIGRIL 133 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~G--rr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l 133 (452)
.-++|...++.+.+..+...+.+...+...++.+..|+++|+.. ++.+..++.+..+++. .+.+.++++.+...-.+
T Consensus 318 ~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~ 397 (509)
T KOG2504|consen 318 FVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSIL 397 (509)
T ss_pred HHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 44556777899999999998888888888899999999999988 3445555555556665 66999999999999999
Q ss_pred HHhHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHH
Q 012965 134 GGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (452)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~ 212 (452)
.|+..|...... +..+.|.-.-.+... .++ ...+..+++.+++|++++.+.+..+ .|...|+..++..++..
T Consensus 398 fG~~~g~~~~l~-~~i~~~~~g~~~l~~----a~G-l~l~~~gi~~l~gpPiag~~~d~tg-~Y~~~f~~~g~~~~~s~ 469 (509)
T KOG2504|consen 398 FGFCVGSFSSLT-PVILVDLVGLEKLSN----AYG-LLLLFQGIGALVGPPIAGLLYDITG-NYDHAFYFCGLCFLLSA 469 (509)
T ss_pred HHHHHHHHHHHH-HHHHHHHcChhhcch----HHH-HHHHHhHHHHHcCcccceeeeeccC-CeeeehhhcChHHHHHH
Confidence 999999887665 325566522222222 222 2333466788888899888776544 25567777666655554
No 242
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.00 E-value=8.8e-05 Score=71.80 Aligned_cols=129 Identities=13% Similarity=0.162 Sum_probs=72.3
Q ss_pred hhhhhhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhc----cCCCCchhHHHHHHHHHHHHHHHHHHHhhh
Q 012965 264 YTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMA----RSPPRVESYMQIVFVVSSVSLLLPIVTSFL 336 (452)
Q Consensus 264 ~~~~~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~d----r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (452)
+.....+.+.|++ ..+.+. +.++....+..++.+++.|+++| |+|||+. .+..+.....+.+..+.+....
T Consensus 20 ~~l~~~~l~~yl~-~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp-~il~g~~~~~~~l~ll~~~~~~ 97 (477)
T TIGR01301 20 WALQLSLLTPYVQ-ELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRP-FIAAGAALVAFAVILIGFAADI 97 (477)
T ss_pred HHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHH-HHHHHHHHHHHHHHHHHhCchh
Confidence 3334555555654 345544 56666777889999999999999 5999983 2222233333333332221111
Q ss_pred cC--CCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccc--cchhhhhhh
Q 012965 337 VA--PSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEAR--STIMNFFRI 394 (452)
Q Consensus 337 ~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r--~~~~g~~~~ 394 (452)
.. .++.++.......+..+++..+..++.+...+...+++.|.+|+++| +.+.+..+.
T Consensus 98 ~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~ 159 (477)
T TIGR01301 98 GHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSF 159 (477)
T ss_pred hhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHH
Confidence 00 00000001111112445555566678887888889999999998865 456665444
No 243
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.98 E-value=6.2e-05 Score=74.77 Aligned_cols=95 Identities=18% Similarity=0.214 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHH
Q 012965 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (452)
Q Consensus 284 ~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 363 (452)
+++.+...+++.++.++.|+++|++|||+. +..+.....++.++.....+. ....++-++.|+
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~--l~~~~~~~~iG~ii~~~a~~~---------------~~l~~GR~l~G~ 154 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKT--LLLAVVLFLIGAIIIALAPSW---------------YQLIVGRILTGL 154 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHH--HHHHHHHHHHHHHHHHHhhhH---------------HHHHHHHHHhcc
Confidence 677888889999999999999999999983 666666666666665544433 478889999999
Q ss_pred HhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 364 CVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
+.|........+.+|..|++.||...+..+..
T Consensus 155 g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~ 186 (513)
T KOG0254|consen 155 GVGGASVLAPVYISEIAPAHIRGTLVSLYQLF 186 (513)
T ss_pred chhhhhhcchhhHhhcCChhhhHHHHHHHHHH
Confidence 99999999999999999999999998887765
No 244
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.94 E-value=0.0012 Score=61.26 Aligned_cols=170 Identities=21% Similarity=0.264 Sum_probs=107.2
Q ss_pred HHHHHHHHHHHhhhhhhhhHHHHH-hhcCCCcchhHHHHHHHHhhhhhcc-cccccccc-ccCcchHHHHHHHHHHHHH-
Q 012965 41 NYLLVYSLMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFG-TIVGSLAD-KQGRKRACVTYCLTYILSC- 116 (452)
Q Consensus 41 ~~~~~~~~~~~~~~~~~p~l~~i~-~~~g~s~~~~g~~~~~~~~~~~l~~-~~~G~l~D-r~Grr~~l~~~~~~~~i~~- 116 (452)
+++...++..++..++-+++.+.- +-+|+|..|...+....-. +.+.+ ...|++.. |.++|+.-..++...+++.
T Consensus 212 ~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~-G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~ 290 (403)
T PF03209_consen 212 RFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGG-GTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFA 290 (403)
T ss_pred HHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHH
Confidence 456666777778888866664444 6799998887655443333 33333 34666555 7788888888888887753
Q ss_pred H---HhcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 012965 117 I---TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLV 190 (452)
Q Consensus 117 l---~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~ 190 (452)
+ .+..++.+.+...-++.|++.|.....+.+ .+-+. ++.+.+.+ .+......+.++|..+++.+-+...
T Consensus 291 lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals-~mM~lt~~~~aG~~mG----~WGaaQA~A~Glg~~~GG~~~D~~~ 365 (403)
T PF03209_consen 291 LIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALS-LMMDLTSAGRAGLFMG----AWGAAQAIARGLGTFLGGALRDLVR 365 (403)
T ss_pred HHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHH-HHHhCCCCcchhHHHH----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 366788999999999999999999887766 43333 45555555 4555555555555555554433222
Q ss_pred ---c-ccCCCcchhhHHHHHHHHHHHHHHH
Q 012965 191 ---D-SFSLGPVAPFDAAACFLAIGMVIIL 216 (452)
Q Consensus 191 ---~-~~~~~~~~~f~~~~~~~~~~~~~~~ 216 (452)
+ ....++...|.+-++..+++.++..
T Consensus 366 ~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 366 ALFGNSPALAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred HhccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1223445666666666666555543
No 245
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.89 E-value=0.00017 Score=69.74 Aligned_cols=125 Identities=21% Similarity=0.310 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHH
Q 012965 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (452)
Q Consensus 284 ~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 363 (452)
+.+++....+.+++.+..+++.||+|.|+ ++..+..+.++..++........ .+.+++.-++.|+
T Consensus 76 ~~i~ss~~~G~i~~~iP~g~l~~k~G~r~--v~~~~~~~sa~~t~l~P~aa~~~-------------~~~~~~~R~lqGl 140 (466)
T KOG2532|consen 76 GLIFSSFFWGYILGQIPGGYLADKFGARR--VFFISGLISALLTLLTPLAASIG-------------FYLLLVLRFLQGL 140 (466)
T ss_pred HHHHHHHHHHHHHHHcCcHHHHHHcCchH--HHHHHHHHHHHHHHHHHHHHHhc-------------chhhHHHHHHhHH
Confidence 78899999999999999999999999988 35555555555544433333221 1255778889999
Q ss_pred HhhchhhHHHHHHhhcCCcccccchhhhhhhh------hhHHHHHHHhcc-ccCCc-hHHHHHHHHHH
Q 012965 364 CVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNV-DAFPI-TVMFGMCSIFL 423 (452)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~-~~~~~-~~~~~~~~~~~ 423 (452)
+.+..+|....+..+..|+++|++..++.... .+..+++.+-+. .||+. .+.+...++..
T Consensus 141 ~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~ 208 (466)
T KOG2532|consen 141 GQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIW 208 (466)
T ss_pred HHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHH
Confidence 99999999999999999999999887765543 233455666554 45544 33333333333
No 246
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.85 E-value=5.9e-05 Score=71.57 Aligned_cols=155 Identities=18% Similarity=0.151 Sum_probs=107.5
Q ss_pred HHhhhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHH
Q 012965 50 MAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILM 128 (452)
Q Consensus 50 ~~~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~ 128 (452)
.++.++...++.--.+|++-.+...|-........-.+.=++.+++.+|+|+-+++..++.+.++=. ..+..+|.|..+
T Consensus 384 G~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vL 463 (618)
T KOG3762|consen 384 GAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVL 463 (618)
T ss_pred HHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchhee
Confidence 3344444445544458888777777744444444333444568899999999999999999998865 668999999999
Q ss_pred HHHHHHHhHhhhhhhhhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHH
Q 012965 129 IGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFL 208 (452)
Q Consensus 129 ~~r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~ 208 (452)
..-+++|+..+..+.+..+ |++...+++.....+......-..+|-++|. ++++.+.+. ++-|..|...++.+
T Consensus 464 Pieilqgit~aliWaa~~s-Y~s~vaPp~l~at~Q~l~~g~f~GlG~g~Gs----lIGG~~v~~--fg~~ttf~~~giAc 536 (618)
T KOG3762|consen 464 PIEILQGITHALIWAAIIS-YASHVAPPGLRATAQGLLQGIFHGLGKGLGS----LIGGFVVER--FGARTTFRIFGIAC 536 (618)
T ss_pred eHHHHHHHHHHHHHHHHHH-HHHhhCCCcchHHHHHHHHHHhcccCcchhh----hhhhhhhee--ehhHHHHHHHHHHH
Confidence 9999999999999999866 8888877777766555555544455555555 555555543 34456666555544
Q ss_pred HHH
Q 012965 209 AIG 211 (452)
Q Consensus 209 ~~~ 211 (452)
++.
T Consensus 537 l~~ 539 (618)
T KOG3762|consen 537 LVT 539 (618)
T ss_pred HHH
Confidence 443
No 247
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.82 E-value=3e-05 Score=54.79 Aligned_cols=76 Identities=13% Similarity=0.129 Sum_probs=64.3
Q ss_pred hhhhhhhHHHHHhhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHH
Q 012965 53 DWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILM 128 (452)
Q Consensus 53 ~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~ 128 (452)
-+...|.+|.+.+|.++|.++.|++.+..+++..++++...++.++..+++.+..+.+...+.. .+++.++.+.+.
T Consensus 8 RFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w~ 84 (85)
T PF06779_consen 8 RFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLWS 84 (85)
T ss_pred HHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHHh
Confidence 3344899999999999999999999999998777888888999999888888999998888876 778888876543
No 248
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.81 E-value=0.0055 Score=59.21 Aligned_cols=55 Identities=11% Similarity=-0.130 Sum_probs=39.2
Q ss_pred HHHHhhcCCC-----cchhHHHHHHHHhhhhhc-cccccccccccCcchHHHHHHHHHHHH
Q 012965 61 YYLYSTYGFG-----KGEIGQLFIAGFGSSMLF-GTIVGSLADKQGRKRACVTYCLTYILS 115 (452)
Q Consensus 61 ~~i~~~~g~s-----~~~~g~~~~~~~~~~~l~-~~~~G~l~Dr~Grr~~l~~~~~~~~i~ 115 (452)
-++.|.+.++ ..++.++.+...+...+. .++.+++++|++|++.+-.....+...
T Consensus 27 R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~ 87 (472)
T TIGR00769 27 RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGF 87 (472)
T ss_pred HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHH
Confidence 4556666663 245667777666655554 678999999999999988877666554
No 249
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.79 E-value=0.00017 Score=71.94 Aligned_cols=91 Identities=10% Similarity=0.036 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHH
Q 012965 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (452)
Q Consensus 284 ~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 363 (452)
....++..++.++|.++.|.++||+|||+ .+..+..+..+..+...+..+. +...+.-++.|+
T Consensus 121 ~~~~s~~~~G~~vG~~i~g~lsD~~GRk~--~~~~~~~~~~i~~~~~a~a~~~---------------~~~~~~Rfl~G~ 183 (521)
T KOG0255|consen 121 ALGQSLFFLGVLVGSLIFGPLSDRFGRKP--VLLVSLLLFIIFGILTAFAPNY---------------WMFLIFRFLSGF 183 (521)
T ss_pred HHHHHHHHHHHHHHHhhheehHhhcccHH--HHHHHHHHHHHHHHHHHHhCcH---------------HHHHHHHHHHHh
Confidence 45667778999999999999999999998 3555555555544444433333 477888899999
Q ss_pred HhhchhhHHHHHHhhcCCcccccchhhh
Q 012965 364 CVGIFWPSIMKMRSQYIPEEARSTIMNF 391 (452)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~ 391 (452)
+.+......+.+..|.++++.|+.+..+
T Consensus 184 ~~~~~~~~~~~~~~E~~~~~~R~~~~~~ 211 (521)
T KOG0255|consen 184 FGSGPLTVGFGLVAEIVSPKQRGLALTL 211 (521)
T ss_pred hccchhHHhHhhheeecCcchhhHHHHH
Confidence 9999999999999999999999999887
No 250
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.72 E-value=0.00074 Score=54.60 Aligned_cols=74 Identities=20% Similarity=0.217 Sum_probs=60.3
Q ss_pred HHHHhhhhhccccccccccccCcchHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc
Q 012965 79 IAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH 153 (452)
Q Consensus 79 ~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~ 153 (452)
++.+....+..++.+.+.+++|.|+.++++.+.+.+-.+.-+-++.+.++.+-.+.|++.+..+.+... ++.+.
T Consensus 44 ai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~-ylt~~ 117 (156)
T PF05978_consen 44 AILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWTAQGT-YLTSY 117 (156)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhHhhhH-HHHHc
Confidence 344444456666788899999999999999999987665566788999999999999999999988755 77776
No 251
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.70 E-value=0.021 Score=52.45 Aligned_cols=325 Identities=12% Similarity=0.036 Sum_probs=140.5
Q ss_pred hHHHHHhhcCCCcchhHHHHHHHHhhhhhcccccccccc-----ccCcchHHHH------HHHHHHHHH-H---H---hc
Q 012965 59 YVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLAD-----KQGRKRACVT------YCLTYILSC-I---T---KH 120 (452)
Q Consensus 59 ~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~D-----r~Grr~~l~~------~~~~~~i~~-l---~---~~ 120 (452)
.+|.+.+.-|.|.++.+.. +..+-.. ..-.++.++.| |+||||..+. +.++..++. . . +-
T Consensus 52 ~iP~lL~ak~vSyt~~a~f-S~ay~P~-sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~ 129 (510)
T KOG3574|consen 52 AIPLLLQAKGVSYTSQAIF-SFAYWPF-SLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGG 129 (510)
T ss_pred hhHHHhcCCCcchhhhhhh-hhhhhHH-HHHHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCC
Confidence 5677778788888887643 2222211 11235888888 9999986543 333333332 1 1 12
Q ss_pred CccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc--ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhh-hhhcc--cCC
Q 012965 121 SPQYKILMIGRILGGIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGN-LLVDS--FSL 195 (452)
Q Consensus 121 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~-~l~~~--~~~ 195 (452)
.++...+...-++.-+..+..-.+...|-+.-. ++-+.... ..+.+...|+.+|..+--.+-. ...+. .+|
T Consensus 130 ~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST----~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~ 205 (510)
T KOG3574|consen 130 LPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYAST----CQSVGQTAGYFLGNVVFLALESPDFCNTYLRSI 205 (510)
T ss_pred CcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhH----HHHHHHhhhHHhhcceeeEecChhhhhHHHhcC
Confidence 344444544556666666666666655443322 44444333 4444444444444332111100 00000 011
Q ss_pred C----c---chhhHHHHHHHHHHHHHHHhccccccCC-CCcchhHHHHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhh
Q 012965 196 G----P---VAPFDAAACFLAIGMVIILSSWTENYGD-PSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFV 267 (452)
Q Consensus 196 ~----~---~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (452)
. . ....+..+.+..+...++.+..+|++.+ .+|.+...++..+..+++++-|.....+......-.++.. .
T Consensus 206 P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~~e~~~~i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a-~ 284 (510)
T KOG3574|consen 206 PLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESVDEELELGIHESYKLLRDVLKLKSVRWLAGILLTGKLGFQA-A 284 (510)
T ss_pred cCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhcCHHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhh-h
Confidence 1 0 0111223333333333333222222221 1222222233334455666666666655444333333222 1
Q ss_pred hhhccccccCCCCCchHHHHHHHHHHHHHHhHHHHHHhccCC--CCchhHH----HHHHHHHHHHHHHHHHHhhhcCCCC
Q 012965 268 FLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSP--PRVESYM----QIVFVVSSVSLLLPIVTSFLVAPSN 341 (452)
Q Consensus 268 ~~~~p~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g--~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (452)
....+.-+.| .|.+.. -.+...+..++.+++.+....|+. +|+.... ..-.........+........++
T Consensus 285 da~t~LkLle-~Gv~ke-~Lal~~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~-- 360 (510)
T KOG3574|consen 285 DALTSLKLLE-HGVPKE-ELALIAVPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHS-- 360 (510)
T ss_pred hhccchHHHH-cCCChh-HheeeeeehhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHHHHHHHHHHhhhcccccC--
Confidence 2233332222 222221 111222444555555555555542 2332111 11111111112222222222111
Q ss_pred cCCCCcc-cchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhhh
Q 012965 342 VKSGGIS-FSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPL 396 (452)
Q Consensus 342 ~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~ 396 (452)
++... ....+.+....+.+......+....+..+++.|+...|+.+.+.|..-
T Consensus 361 --~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLs 414 (510)
T KOG3574|consen 361 --DGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLS 414 (510)
T ss_pred --CCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHH
Confidence 11111 111222333444454555455667888899999999999998888753
No 252
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.69 E-value=0.00046 Score=64.49 Aligned_cols=98 Identities=9% Similarity=-0.008 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHH
Q 012965 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (452)
Q Consensus 284 ~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 363 (452)
+.+.....++.+.|+++.|++.||+|||+. .....++..++... ....... ++.....+.+...=.+.|+
T Consensus 87 ~~Vn~~A~vGti~GQl~FG~lgD~~GRK~v--YG~~liImIi~t~~-~~~s~~~-------~~~~~~m~~L~~~R~~LGi 156 (538)
T KOG0252|consen 87 ALVNAAALVGTIFGQLFFGWLGDKFGRKKV--YGKELIIMIICSAL-SGLSVGT-------TSPLGVMMTLCFFRFLLGI 156 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchhh--hhHHHHHHHHHHHH-hccCCCC-------CCCcchhhHHHHHHHHhhc
Confidence 456667778999999999999999999983 22233333222222 1111111 1111122345555677899
Q ss_pred HhhchhhHHHHHHhhcCCcccccchhhh
Q 012965 364 CVGIFWPSIMKMRSQYIPEEARSTIMNF 391 (452)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~ 391 (452)
|.|.-+|...+..+|...++.||+-.+.
T Consensus 157 GIGGDYPlSAtI~SE~an~~~RGa~iaa 184 (538)
T KOG0252|consen 157 GIGGDYPLSATIMSESANKKTRGAFIAA 184 (538)
T ss_pred cccCCCcchHHHhhhhhhhccccceeEE
Confidence 9999999999999999999999976544
No 253
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.54 E-value=0.0024 Score=58.93 Aligned_cols=129 Identities=14% Similarity=0.141 Sum_probs=87.6
Q ss_pred hhhHHHHHhh-cCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHH
Q 012965 57 GPYVYYLYST-YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILG 134 (452)
Q Consensus 57 ~p~l~~i~~~-~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~ 134 (452)
..+++...+| .|.+..+.....+..+...+++..++.++..|+...|.+....++..+-+ ..++.++...+. +-++.
T Consensus 256 gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~~~-~l~~i 334 (422)
T COG0738 256 GSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGVVALY-ALFLI 334 (422)
T ss_pred HHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHHHH-HHHHH
Confidence 5556666666 77777777776677767666777778888889999999988887776654 557788865554 45778
Q ss_pred HhHhhhhhhhhhhhhhhhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCC
Q 012965 135 GIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSL 195 (452)
Q Consensus 135 G~~~~~~~~~~~~~~i~e~-~~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~ 195 (452)
|+..+..+|...+ .-.+. .+.....+ +..+...+|+.+.|.+-+++.|..+.
T Consensus 335 g~F~simfPTIfs-lal~~l~~~ts~~s--------~~l~maivGGAiiP~l~G~i~d~~g~ 387 (422)
T COG0738 335 GLFNSIMFPTIFS-LALKNLGEHTSVGS--------GLLVMAIVGGAIIPPLQGVIADMFGI 387 (422)
T ss_pred HHHhHHHHHHHHH-HHHhccCccccccc--------eeeeeheecchHHHHHHHHHHHhhhh
Confidence 9999999998765 43322 21112111 22223457778888888888876554
No 254
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.44 E-value=0.0017 Score=62.25 Aligned_cols=135 Identities=13% Similarity=0.158 Sum_probs=83.0
Q ss_pred cchhHHHHHHHHHhhhchhhhh-hhhhccccccC-CCCC--ch-HHHHHHHHHHHHHHhHHHHHHhccCC--CCchhHHH
Q 012965 245 SDEKIALLGAIQSLFEGSMYTF-VFLWTPALSPN-DEEI--PH-GFIFATFMLASMLGSSLASRLMARSP--PRVESYMQ 317 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~-~~~~--~~-~~~~~~~~i~~~~~~~~~g~l~dr~g--~~~~~~~~ 317 (452)
.++|...+.....+.....+.. .....| |+++ ..+. +. |++.+...++..+++++.|++..|.+ ||+ +.
T Consensus 31 t~wrsi~l~~~~sfl~~v~~sI~~~s~wp-Yl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~P---li 106 (488)
T KOG2325|consen 31 TNWRSIYLALLNSFLVAVQFSIYLTSMWP-YLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKP---LI 106 (488)
T ss_pred CchHhHHHHHHHHHHHhhhheEEEeecch-hhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccC---HH
Confidence 4455555555555444433332 122233 3332 1222 22 88888899999999999999999988 555 67
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhh
Q 012965 318 IVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (452)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (452)
.+..+..++.++-.......+ . ..++.+++-++.|++.+ .....-+++++..-.+.|.++++..+.
T Consensus 107 ~s~ii~~~g~llY~~l~~~~~------~----~~y~mL~~R~l~Gvg~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~ 172 (488)
T KOG2325|consen 107 VSFLIAIIGNLLYLALAYVPN------G----VKYLMLVARILTGVGVG-NFAVLRAYIADASTVEDRPRAFAATSG 172 (488)
T ss_pred HHHHHHHHHHHHHHHHHhccc------c----hHHHHHHHHHHcCcCcc-cHHHHHHHHHhccCccchHHHHHHhhh
Confidence 777777777666533333311 0 12577788888887776 345677888886666666666655444
No 255
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.40 E-value=0.022 Score=52.22 Aligned_cols=89 Identities=16% Similarity=0.174 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHH
Q 012965 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (452)
Q Consensus 284 ~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 363 (452)
+.++...-..+++...+.|.++||+|||+. .+...++..+.++.-. .... ..++++-++-|+
T Consensus 72 a~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~--cl~~cily~~scl~k~-~~~~---------------~~L~~GRvlgGi 133 (354)
T PF05631_consen 72 AILFVAGFASSAIFGTFVGSLADRYGRKKA--CLLFCILYSLSCLTKH-SSNY---------------PVLLLGRVLGGI 133 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHH--HHHHHHHHHHHHHHHh-cccc---------------HHHHHHHHHHHH
Confidence 555555556788888899999999999983 3334444444443211 1111 367778888888
Q ss_pred HhhchhhHHHHH-Hhhc----CCcccccchhh
Q 012965 364 CVGIFWPSIMKM-RSQY----IPEEARSTIMN 390 (452)
Q Consensus 364 ~~~~~~~~~~~~-~~~~----~p~~~r~~~~g 390 (452)
+....+...-++ +.|. +|++..+...+
T Consensus 134 aTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~ 165 (354)
T PF05631_consen 134 ATSLLFSAFESWMVHEHNKRGFPQEWLSDTFS 165 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 888777665553 3443 34444444444
No 256
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.38 E-value=0.0043 Score=54.53 Aligned_cols=127 Identities=20% Similarity=0.134 Sum_probs=69.7
Q ss_pred HHhhhchhhhhhhhhccccccCCCCCchHHHH---HHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHH
Q 012965 256 QSLFEGSMYTFVFLWTPALSPNDEEIPHGFIF---ATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIV 332 (452)
Q Consensus 256 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~ 332 (452)
.....+..|.+ ..|.|.+ ++.++.++.... ....++..+ .++.|.+.||+|.+. .+.++......+......
T Consensus 11 v~~~~Gt~Y~F-s~yS~~L-k~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~--~l~iG~~~~~~GY~~~~l 85 (250)
T PF06813_consen 11 VQLCSGTTYTF-SAYSPQL-KSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWV--VLLIGAVLGFVGYGLLWL 85 (250)
T ss_pred HHHhcCcccch-hhhhHHH-HHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHH--HHHHHHHHHHHHHHHHHH
Confidence 33444455553 5555554 456777765433 333456555 488899999998776 355555555555544333
Q ss_pred HhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhhh
Q 012965 333 TSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPL 396 (452)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~ 396 (452)
.....- ...+.|...+..++.+.+....+........+.+|+ +||++.|+.-...
T Consensus 86 ~~~~~i--------~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~ 140 (250)
T PF06813_consen 86 AVSGRI--------PSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFF 140 (250)
T ss_pred HHhCcc--------CccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHH
Confidence 222210 011123444444444444444445555566688986 6999988755433
No 257
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.29 E-value=6.3e-06 Score=80.55 Aligned_cols=98 Identities=13% Similarity=0.171 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHH
Q 012965 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (452)
Q Consensus 284 ~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 363 (452)
+...+...++..+|+++.|+++||+|||+. +..+..+..++.++..+.....+ .+...++-++.|+
T Consensus 49 ~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~--~~~~~~~~~i~~~~~~~~~~~~~------------~~~~~~~R~~~G~ 114 (451)
T PF00083_consen 49 SLLTSSFFIGAIVGALIFGFLADRYGRKPA--LIISALLMIIGSILIAFAPSYNN------------FWMLLIGRFLIGF 114 (451)
T ss_pred HHHHHHHHhhhccccccccccccccccccc--ccccccccccccccccccccccc------------ccccccccccccc
Confidence 566677789999999999999999999983 44554444444444333331100 1366777888999
Q ss_pred HhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 364 CVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
+.|...+....++.|..|++.|+...++.+..
T Consensus 115 ~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~ 146 (451)
T PF00083_consen 115 GIGGAYVVSPIYISEIAPPKHRGFLSSLFQLF 146 (451)
T ss_pred cccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999888777764
No 258
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.19 E-value=0.0017 Score=63.25 Aligned_cols=89 Identities=9% Similarity=0.017 Sum_probs=54.7
Q ss_pred hhhHHHHHhh-cCCCcchhHHHHHHHHhhhhhccccccccccc----cCcchHHHHHHHHHHH-HH-HHhcCccHHHHHH
Q 012965 57 GPYVYYLYST-YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK----QGRKRACVTYCLTYIL-SC-ITKHSPQYKILMI 129 (452)
Q Consensus 57 ~p~l~~i~~~-~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr----~Grr~~l~~~~~~~~i-~~-l~~~~~~~~~l~~ 129 (452)
.-.+|.+.++ .|+|..+.+.+.....+.+.++.+++|+++|| ..+|........++.+ +. .....++......
T Consensus 293 ~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~ 372 (495)
T KOG2533|consen 293 SYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAVLPGAYG 372 (495)
T ss_pred HHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHhH
Confidence 3344555555 56888888877777777788888899999999 6777777777777655 53 3333333443333
Q ss_pred HHHHHHhHhhhhhhhh
Q 012965 130 GRILGGIATSLLFSAF 145 (452)
Q Consensus 130 ~r~l~G~~~~~~~~~~ 145 (452)
.-.....+.....+..
T Consensus 373 ~~~~~~~~~~~~~~~~ 388 (495)
T KOG2533|consen 373 AFLIGPYGLIATAIIA 388 (495)
T ss_pred HHHhcchhhHHHHHHH
Confidence 3333333333333343
No 259
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.11 E-value=0.027 Score=53.45 Aligned_cols=106 Identities=13% Similarity=0.269 Sum_probs=68.8
Q ss_pred hHHHHHHHHHHHHH-H---HhcCccH------HHHHHHHHHHHhHhhhhhhhhhhhhhhhc-cc--ccchhhHHHHHHHH
Q 012965 103 RACVTYCLTYILSC-I---TKHSPQY------KILMIGRILGGIATSLLFSAFESWLVAEH-NK--RGFEQQWLSITFSK 169 (452)
Q Consensus 103 ~~l~~~~~~~~i~~-l---~~~~~~~------~~l~~~r~l~G~~~~~~~~~~~~~~i~e~-~~--r~~~~~~~~~~~~~ 169 (452)
|+++.+.+++.+|. + .+.-++. +.++++-.+.++|.|..-|...+ +.+|. ++ +.++.+.. +
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~-~~~dq~~~~~~~~~~~~F----~- 75 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISP-FGADQYDEDDDSRRDSFF----N- 75 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHH-HHHHCSSTTTTTHHHHHH----H-
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHH-HHHHHhcccchhhhhhhH----H-
Confidence 56778888888874 3 2333333 68899999999999999999866 87776 22 23333322 2
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHH
Q 012965 170 AIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIIL 216 (452)
Q Consensus 170 ~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~ 216 (452)
....+..+|..++.....++.++ ++|...|.+.++..+++.....
T Consensus 76 ~fY~~in~G~~~~~~~~~~i~~~--~~~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 76 WFYWGINIGSLFSPTLVPYIQQN--YGWFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHHHHHHHHHHHHHHCCCHHHHC--S-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhHhhcccchhhccc--cchhhhhhHHHHHHHHHHHHHH
Confidence 22334556777776777776654 4556778887777776665554
No 260
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=97.09 E-value=0.084 Score=47.55 Aligned_cols=90 Identities=20% Similarity=0.237 Sum_probs=66.9
Q ss_pred cccccccccCcchHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc-----ccc---------
Q 012965 91 IVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH-----NKR--------- 156 (452)
Q Consensus 91 ~~G~l~Dr~Grr~~l~~~~~~~~i~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~-----~~r--------- 156 (452)
+.+.+..++|-|+++.++...+......=+-+.+..++-.-...|++.+..+..--+ |+++. +.|
T Consensus 77 ~~~~~Ir~~g~K~tm~lav~~Y~lyiA~Nl~pr~~tlVPa~~~~G~aa~p~W~Skgt-YlT~~g~~ya~~~~~q~~~~~~ 155 (390)
T KOG3097|consen 77 FMPLLIRFLGTKWTMVLAVFPYALYIAANLEPRYETLVPAGLVLGMAAGPIWASKGT-YLTPMGQNYANQRGEQAGDGMK 155 (390)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHhhcchhHHhhccHHHhhccccccccccCcc-eecHHHHHHHHhhhhhccCcee
Confidence 455889999999999999988887666667788899999999999999998877645 65543 334
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHH
Q 012965 157 GFEQQWLSITFSKAIFLGNGLVAIL 181 (452)
Q Consensus 157 ~~~~~~~~~~~~~~~~~g~~ig~~~ 181 (452)
.+..+.....+......|+.+...+
T Consensus 156 ~~ffg~Ffii~~~~qv~gn~issli 180 (390)
T KOG3097|consen 156 VRFFGEFFIIFQCAQVWGNLISSLI 180 (390)
T ss_pred eeehhHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666666666666555544
No 261
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=96.93 E-value=0.0036 Score=57.05 Aligned_cols=122 Identities=13% Similarity=0.109 Sum_probs=66.0
Q ss_pred hhhccccccccccccCcchHHHHHHHHHHHHH-HH--hcCccHH--HHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccc
Q 012965 85 SMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT--KHSPQYK--ILMIGRILGGIATSLLFSAFESWLVAEH---NKR 156 (452)
Q Consensus 85 ~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~--~~~~~~~--~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r 156 (452)
..-+.++.+.+.||+|||+++..+.+++++.. +. ...+|.. .+..+|++...+. .++.. |..|. .-|
T Consensus 394 efPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~f----qvaYv-YtPEVyPTavR 468 (528)
T KOG0253|consen 394 EFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAF----QVAYV-YTPEVYPTAVR 468 (528)
T ss_pred hCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchh----eEEEE-ecCcccchhhh
Confidence 33444579999999999999999999998864 33 3344443 3445565544333 33312 55565 223
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHhccc-cccC
Q 012965 157 GFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWT-ENYG 224 (452)
Q Consensus 157 ~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~-~~~~ 224 (452)
+...+ . +.. ..-+|.++.|+++ ...+ -.-..+..+.+.+.+++.+... ..| |+++
T Consensus 469 atgvG---t----cSs-maRIggI~~p~iA-~~~e---~s~sl~i~vy~~~~ilagIavc-ffPiEtkG 524 (528)
T KOG0253|consen 469 ATGVG---T----CSS-MARIGGIFSPVIA-MRAE---LSTSLPIFVYGALFILAGIAVC-FFPIETKG 524 (528)
T ss_pred hcchh---h----hhh-HHhhhhhhhhHHH-HHhc---cceeehHHHHHHHHHHHHHHhe-eeeeccCC
Confidence 33222 1 111 1336667777766 2221 1223455555555555555554 344 4443
No 262
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.70 E-value=0.02 Score=53.81 Aligned_cols=111 Identities=14% Similarity=0.164 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHH
Q 012965 285 FIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEAC 364 (452)
Q Consensus 285 ~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 364 (452)
+...++++..++..+.+-|+.||+|-|.. ..++.....++..+=.......-+ +..+- .+...+..+.+..
T Consensus 83 wlsmIym~v~vp~gf~~mw~ldk~GLR~a--~llgt~ln~iGa~Ir~iss~p~v~-----~~f~~--~l~~~Gq~iaa~A 153 (480)
T KOG2563|consen 83 WLSMIYMVVSVPFGFAAMWILDKFGLRTA--LLLGTVLNGIGAWIRLISSLPFVP-----PLFRR--PLTHTGQSIAAAA 153 (480)
T ss_pred HHHHHHHHHHHHHhhHHHHhhcccchHHH--HHHHHHHHHHHHHHhhhccCcccc-----ccchh--hhhHHhHHHHHHh
Confidence 55566778889999999999999998874 555555555444432221111000 00110 1445666666655
Q ss_pred hhchhhHHHHHHhhcCCcccccchhhhhhhh--hhHHHHHHH
Q 012965 365 VGIFWPSIMKMRSQYIPEEARSTIMNFFRIP--LNIFVCVVL 404 (452)
Q Consensus 365 ~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~--~~~~~~~~l 404 (452)
.-.......-...-.+|+++|+++..+..+. .|..++..+
T Consensus 154 q~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~ll 195 (480)
T KOG2563|consen 154 QPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLL 195 (480)
T ss_pred hhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhc
Confidence 5544444445566679999999998776665 566555544
No 263
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=96.56 E-value=0.44 Score=44.77 Aligned_cols=40 Identities=10% Similarity=0.102 Sum_probs=30.3
Q ss_pred hhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhh
Q 012965 352 SLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNF 391 (452)
Q Consensus 352 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~ 391 (452)
+..+....++|+..|-.......++.+.+|++++-.+-.+
T Consensus 344 ~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~ 383 (406)
T KOG1479|consen 344 GWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNL 383 (406)
T ss_pred hHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHH
Confidence 4567778888888887778888889999888876555433
No 264
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.43 E-value=0.98 Score=43.71 Aligned_cols=51 Identities=10% Similarity=0.078 Sum_probs=37.3
Q ss_pred hhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh--hhHHHHH
Q 012965 352 SLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP--LNIFVCV 402 (452)
Q Consensus 352 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~--~~~~~~~ 402 (452)
+..++..+++|+..|-.......+..+..++++|..+-.+..+. .|...|.
T Consensus 373 ~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs 425 (437)
T TIGR00939 373 AYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGA 425 (437)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667788899999988888888899999888887766554443 3444443
No 265
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=95.95 E-value=1.7 Score=41.99 Aligned_cols=46 Identities=13% Similarity=0.190 Sum_probs=33.4
Q ss_pred hHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhhhhH
Q 012965 353 LQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNI 398 (452)
Q Consensus 353 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~ 398 (452)
.+++..++..+.....+....+.-+++.+|..-|+.|.+.|+..|.
T Consensus 407 lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNL 452 (544)
T PF13000_consen 407 LVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNL 452 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhc
Confidence 3344455555566666677888999999999999999888875443
No 266
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=95.90 E-value=0.097 Score=53.23 Aligned_cols=151 Identities=17% Similarity=0.202 Sum_probs=82.2
Q ss_pred ccccCCCCCchH---HHHHHHHHHHHHHhHHHHHHhcc-CCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcc
Q 012965 273 ALSPNDEEIPHG---FIFATFMLASMLGSSLASRLMAR-SPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGIS 348 (452)
Q Consensus 273 ~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (452)
.|+.+..+.+.. .++.......-+..+++|+++|+ +|+++ .+..+.++..++..++...... . ....
T Consensus 12 lYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~--tIl~~~ii~~lG~~llai~a~~---~----~~~~ 82 (654)
T TIGR00926 12 LYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFK--TILYLSIVYVVGHALLSFGAIP---S----SGHP 82 (654)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH--HHHHHHHHHHHHHHHHHhccCc---c----cccc
Confidence 344444555443 33344444556667788999997 56665 3555555555555444332111 0 0000
Q ss_pred cchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccc---cchhhhhhhhhhH--HHH----HHHhcc-c----cCCchH
Q 012965 349 FSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEAR---STIMNFFRIPLNI--FVC----VVLYNV-D----AFPITV 414 (452)
Q Consensus 349 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r---~~~~g~~~~~~~~--~~~----~~l~~~-~----~~~~~~ 414 (452)
......++++.+...|.|..-|...+...|.++++.+ -+.+.++....|. +++ .++.+. . ..++..
T Consensus 83 ~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~ 162 (654)
T TIGR00926 83 LHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPL 162 (654)
T ss_pred hHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHH
Confidence 1112456778888899999999999999999986543 3444444333332 222 222211 1 124666
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 012965 415 MFGMCSIFLLVASVLQRR 432 (452)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~ 432 (452)
.+.++++..+++.+....
T Consensus 163 aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 163 AFGVPAILMILALIVFMA 180 (654)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 777777666665554443
No 267
>PF12832 MFS_1_like: MFS_1 like family
Probab=95.78 E-value=0.049 Score=38.16 Aligned_cols=46 Identities=17% Similarity=0.168 Sum_probs=36.3
Q ss_pred hhhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCch
Q 012965 267 VFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVE 313 (452)
Q Consensus 267 ~~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~ 313 (452)
..-+.|.+.++ .|.+. |.+.++..+..+++.++.|+++||.++++.
T Consensus 19 ~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~ 67 (77)
T PF12832_consen 19 LYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKV 67 (77)
T ss_pred HHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHH
Confidence 46677777774 45544 677777778899999999999999998883
No 268
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=95.73 E-value=1.2 Score=44.72 Aligned_cols=154 Identities=17% Similarity=0.135 Sum_probs=87.5
Q ss_pred hhhHHHHHhhcCCCcchhHHHHHHHHhhhhhcccccccccccc-CcchHHHHHHHHHHHHH-H---Hh----cCc-----
Q 012965 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCLTYILSC-I---TK----HSP----- 122 (452)
Q Consensus 57 ~p~l~~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~-Grr~~l~~~~~~~~i~~-l---~~----~~~----- 122 (452)
.+.+.++.++++.+.....-..........+....++.++|-| ||-+++.++.++..++. + .+ +.+
T Consensus 58 ~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~ 137 (571)
T KOG1237|consen 58 SNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKF 137 (571)
T ss_pred hHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccC
Confidence 5666677788888876555443433333445555689999975 89999998887776552 1 11 111
Q ss_pred ----------c---HHHHHHHHHHHHhHhhhhhhhhhhhhhhhc-c---cccchhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 012965 123 ----------Q---YKILMIGRILGGIATSLLFSAFESWLVAEH-N---KRGFEQQWLSITFSKAIFLGNGLVAILSGLF 185 (452)
Q Consensus 123 ----------~---~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~-~---~r~~~~~~~~~~~~~~~~~g~~ig~~~~~~l 185 (452)
+ ...++.+.-+..+|.|+.-|...+ +=+|. + ++++.. ....++ ........|..++..+
T Consensus 138 ~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~-fGadQfd~~~~~~~~~--~~~fFn-W~yf~~~~g~l~a~t~ 213 (571)
T KOG1237|consen 138 KPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLA-FGADQFDELDPVEVKG--IPSFFN-WFYFSQNGGALLAQTV 213 (571)
T ss_pred CCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchh-hcccccCccCcchhhC--cccchh-HHHHHHHHHHHHHHHH
Confidence 1 125667777777888988887755 54443 2 111111 001122 2223344666666666
Q ss_pred hhhhhcccCCCcchhhHHHHHHHHHHHHHHH
Q 012965 186 GNLLVDSFSLGPVAPFDAAACFLAIGMVIIL 216 (452)
Q Consensus 186 ~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~ 216 (452)
..+.-++.+|. .-|.+..+...++.++..
T Consensus 214 ~vyiq~~~~w~--lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 214 LVYIQDNVGWK--LGFGIPTVLNALAILIFL 242 (571)
T ss_pred HHhhhhcccce--eeccHHHHHHHHHHHHHH
Confidence 66655555554 446666665555544433
No 269
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=95.66 E-value=2.4 Score=41.64 Aligned_cols=78 Identities=9% Similarity=0.047 Sum_probs=43.0
Q ss_pred HHHHHhhHHhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCC----ch--HHHHHHHHHHHHHHhHHHHHHhcc
Q 012965 234 TQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI----PH--GFIFATFMLASMLGSSLASRLMAR 307 (452)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~----~~--~~~~~~~~i~~~~~~~~~g~l~dr 307 (452)
...++..+.++|+|....++.............-..|-. ..++.+.. +. |......++..++..++++++.+|
T Consensus 267 ~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~-~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~ 345 (491)
T PF03219_consen 267 MSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKS-QLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRR 345 (491)
T ss_pred ccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345667778888887776665554444443322122221 12222211 11 444455566666666888999999
Q ss_pred CCCCc
Q 012965 308 SPPRV 312 (452)
Q Consensus 308 ~g~~~ 312 (452)
+|-+.
T Consensus 346 ~GW~~ 350 (491)
T PF03219_consen 346 FGWRT 350 (491)
T ss_pred hhHHH
Confidence 88665
No 270
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=95.18 E-value=0.12 Score=50.23 Aligned_cols=118 Identities=14% Similarity=0.137 Sum_probs=67.5
Q ss_pred HHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchh
Q 012965 290 FMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFW 369 (452)
Q Consensus 290 ~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 369 (452)
.++..++.+...|.++||+|||....+.....+....+.. +.. . ...+ ..-...+.+..+
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~--~~~-~----------------~~~~-~~~l~g~~~~~~ 130 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLL--FQG-Y----------------WFFL-LLGLSGGFSAIF 130 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHH--HHH-H----------------HHhh-hcccccchhhhh
Confidence 3577888899999999999998742222222222221111 111 1 1122 112223445566
Q ss_pred hHHHHHHhhcCCcccccchhhhhhhhh------hHHHHHHHhccccCCchHHHHHHHHHHHHHHHH
Q 012965 370 PSIMKMRSQYIPEEARSTIMNFFRIPL------NIFVCVVLYNVDAFPITVMFGMCSIFLLVASVL 429 (452)
Q Consensus 370 ~~~~~~~~~~~p~~~r~~~~g~~~~~~------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (452)
....++++|...++.|...+|+.+... ++..++..... .+....+.+..+........
T Consensus 131 s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~--~~~a~~f~ia~~~~~~~~~y 194 (463)
T KOG2816|consen 131 SVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKF--LGIALVFLIAAASGILSLLY 194 (463)
T ss_pred hhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh--cCchHHHHHHHHHHHHHHHH
Confidence 778899999999999999998877632 22333444343 45555555555555544443
No 271
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=94.87 E-value=0.68 Score=41.60 Aligned_cols=71 Identities=15% Similarity=0.148 Sum_probs=46.9
Q ss_pred HHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHHhHhhhhhhhh
Q 012965 75 GQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAF 145 (452)
Q Consensus 75 g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 145 (452)
|.+...-.+...+.-.......||+---.-..+..++.+.+. +.+++++.++-+.+-.+..++.|.....-
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTF 136 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITF 136 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeeh
Confidence 444444444455555556777888654333444455556665 66999999999999899888888766554
No 272
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=94.75 E-value=0.37 Score=46.74 Aligned_cols=107 Identities=15% Similarity=0.081 Sum_probs=64.6
Q ss_pred cccCCCCCchHHHHHHHHHHHHH--HhHHHHHHhccC---CCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcc
Q 012965 274 LSPNDEEIPHGFIFATFMLASML--GSSLASRLMARS---PPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGIS 348 (452)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~i~~~~--~~~~~g~l~dr~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (452)
++++.++.+++.......+..++ ..++.|.++|-+ |+||...+.++..+..+............ .+.
T Consensus 15 ~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~-------~s~- 86 (433)
T PF03092_consen 15 FLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASE-------SSA- 86 (433)
T ss_pred HHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhccccc-------chh-
Confidence 55677888887666666655543 457999999986 55554566666665544444433333210 111
Q ss_pred cchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCccc--ccchhhh
Q 012965 349 FSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA--RSTIMNF 391 (452)
Q Consensus 349 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~--r~~~~g~ 391 (452)
....+.+++..++.........++..|...++. |+...+.
T Consensus 87 ---~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~ 128 (433)
T PF03092_consen 87 ---AIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSF 128 (433)
T ss_pred ---hhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHH
Confidence 234555666777787777888888888764333 4444443
No 273
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=94.34 E-value=0.51 Score=38.23 Aligned_cols=87 Identities=9% Similarity=0.059 Sum_probs=59.1
Q ss_pred HHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhch
Q 012965 289 TFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIF 368 (452)
Q Consensus 289 ~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 368 (452)
+.-....+..++.+.+.+++|.|+. +.++.....+-.... +.... +..+.+..+.|++.+..
T Consensus 45 i~Y~~~~~s~l~~P~iv~~lg~K~s--m~lg~~~y~~y~~~~-~~~~~---------------~~l~~~s~l~G~~~a~l 106 (156)
T PF05978_consen 45 ILYGSFAISCLFAPSIVNKLGPKWS--MILGSLGYAIYIASF-FYPNS---------------YTLYPASALLGFGAALL 106 (156)
T ss_pred HHHHHHHHHHHhHHHHHHHHhhHHH--HHHHHHHHHHHHHHH-HhhhH---------------HHHHHHHHHHhhhhHHh
Confidence 3334556666778888999988773 444443333222221 12222 46788889999999999
Q ss_pred hhHHHHHHhhcCCcccccchhhhhh
Q 012965 369 WPSIMKMRSQYIPEEARSTIMNFFR 393 (452)
Q Consensus 369 ~~~~~~~~~~~~p~~~r~~~~g~~~ 393 (452)
|...-.++.+..+++.+++..|+.-
T Consensus 107 W~aqg~ylt~~s~~~~~~~~~~ifw 131 (156)
T PF05978_consen 107 WTAQGTYLTSYSTEETIGRNTGIFW 131 (156)
T ss_pred hHhhhHHHHHcCCHHHHhhHHHHHH
Confidence 9999999999998888888776533
No 274
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=93.08 E-value=0.019 Score=57.03 Aligned_cols=118 Identities=13% Similarity=0.130 Sum_probs=2.9
Q ss_pred ccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCC-----------
Q 012965 275 SPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPS----------- 340 (452)
Q Consensus 275 ~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 340 (452)
.++.++.+. |.+.+..-++.++..++..++.+|.+|.+ ++..+..+.+++.++...-.....++
T Consensus 29 iErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrpr--wig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~ 106 (539)
T PF03137_consen 29 IERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPR--WIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGN 106 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc--eeeecHHHHHHHHHHHhccHhhcCCCccccccccccc
Confidence 345566644 67777788899999988899988865443 57777777766665544322111110
Q ss_pred ------------------------CcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhh
Q 012965 341 ------------------------NVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (452)
Q Consensus 341 ------------------------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (452)
...+.......+.++++.++.|+|....++...+++-|.++++..+...|+...
T Consensus 107 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~ 184 (539)
T PF03137_consen 107 SSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYA 184 (539)
T ss_dssp ---------------------------------------------SSS------------------------------
T ss_pred cccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhH
Confidence 000111222346788899999999999999999999999999998877777665
No 275
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=92.77 E-value=0.29 Score=46.40 Aligned_cols=129 Identities=15% Similarity=0.143 Sum_probs=76.6
Q ss_pred hhhhhhhccccccCCCCCc---hHHHHHHHHHHHHHHhHHHHHHhcc----CCCCchhHHHHHHHHHHHHHHHHHHHhhh
Q 012965 264 YTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSLASRLMAR----SPPRVESYMQIVFVVSSVSLLLPIVTSFL 336 (452)
Q Consensus 264 ~~~~~~~~p~~~~~~~~~~---~~~~~~~~~i~~~~~~~~~g~l~dr----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (452)
+..-..+.|.|.++ .|.+ .+.++...-+.+++.+++.|..+|| +||||. .+........+.+.+..+....
T Consensus 48 wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRP-fI~~~s~~i~~~l~Lig~aaDi 125 (498)
T KOG0637|consen 48 WALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRP-FILAGSLLIAVSLFLIGYAADI 125 (498)
T ss_pred HHHHhccccHHHHH-cCCCcccccccccccccccceecccccccccccccccccccc-hHHHhhHHHHHHHhhhhhHhhh
Confidence 33345667766653 2332 2555566667788889999999996 688884 3444444444444444333222
Q ss_pred cC--CCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccc-hhhhhhh
Q 012965 337 VA--PSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARST-IMNFFRI 394 (452)
Q Consensus 337 ~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~-~~g~~~~ 394 (452)
.. .+++..+.........++++-+.-+.....+...-++..|...++++.+ +++...+
T Consensus 126 g~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~ 186 (498)
T KOG0637|consen 126 GLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSF 186 (498)
T ss_pred hHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHH
Confidence 11 0000111222334456667777777777788888999999987777666 7666554
No 276
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=91.59 E-value=15 Score=36.07 Aligned_cols=48 Identities=8% Similarity=0.063 Sum_probs=31.6
Q ss_pred HHHHHHHHHhhchhh-HHHHHHhhcCCcccccchhhhhhhhh--hHHHHHH
Q 012965 356 LGFCTFEACVGIFWP-SIMKMRSQYIPEEARSTIMNFFRIPL--NIFVCVV 403 (452)
Q Consensus 356 ~~~~~~g~~~~~~~~-~~~~~~~~~~p~~~r~~~~g~~~~~~--~~~~~~~ 403 (452)
+.+...........+ ..|.+++|.+..++..+-+++.+... +.++++.
T Consensus 133 ~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~ 183 (472)
T TIGR00769 133 LFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGR 183 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344444444445 78999999999999888888877753 3344443
No 277
>PRK03612 spermidine synthase; Provisional
Probab=90.93 E-value=11 Score=37.52 Aligned_cols=32 Identities=6% Similarity=-0.168 Sum_probs=20.3
Q ss_pred hhcCCCcchhHHHHHHHHhhhhhccccccccc
Q 012965 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLA 96 (452)
Q Consensus 65 ~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~ 96 (452)
.-+|.+..+.+.+.++...+..+++.+.|++.
T Consensus 43 ~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~ 74 (521)
T PRK03612 43 YLLGDSVTQFSTVIGLMLFAMGVGALLSKYLL 74 (521)
T ss_pred HHhCchHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 45677777777666666665556555566555
No 278
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=90.64 E-value=1.4 Score=39.62 Aligned_cols=97 Identities=22% Similarity=0.249 Sum_probs=60.2
Q ss_pred hHHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHH
Q 012965 283 HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFE 362 (452)
Q Consensus 283 ~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 362 (452)
.+.......+....+.++.|++.||.|||+. .................... ...+.........+
T Consensus 41 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~--~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~g 105 (338)
T COG0477 41 YGLLLSAFFLGYAIGSLLAGPLGDRYGRRKV--LIIGLLLFLLGTLLLALAPN-------------VGLALLLILRLLQG 105 (338)
T ss_pred HHHHHHHHHHHHHHHhhhhhhccccccchHH--HHHHHHHHHHHHHHHHhCcc-------------chHHHHHHHHHHHH
Confidence 4667777777888888999999999988852 33333221222112111111 00124444445577
Q ss_pred HHhhchhhHHHHHHhhcCCc-ccccchhhhhhh
Q 012965 363 ACVGIFWPSIMKMRSQYIPE-EARSTIMNFFRI 394 (452)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~p~-~~r~~~~g~~~~ 394 (452)
++.+...+...++..|..|+ +.|+...+....
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (338)
T COG0477 106 LGGGGLLPVASALLSEWFPEATERGLAVGLVTL 138 (338)
T ss_pred hhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Confidence 88887889999999999998 556666555444
No 279
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=90.20 E-value=2.8 Score=39.77 Aligned_cols=113 Identities=18% Similarity=0.224 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCccc---ccchhhhh
Q 012965 316 MQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA---RSTIMNFF 392 (452)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~---r~~~~g~~ 392 (452)
+..+..+..++..++......... +.........+++.+.++|.|..-|...++..|.++++. |.+.+..+
T Consensus 4 I~~g~~~~~~G~~ll~l~~~~~~~------~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~f 77 (372)
T PF00854_consen 4 ILLGSIVYLLGHVLLTLSAIPPSL------PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWF 77 (372)
T ss_dssp HHHHHHHHHHHHHH--HHHTSSSC------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhHHHHhcchh------hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHH
Confidence 555566666665554433333111 001112477888899999999999999999999999874 33444444
Q ss_pred hhhhhH--HHHHHH--hccccCCchHHHHHHHHHHHHHHHHHHhhh
Q 012965 393 RIPLNI--FVCVVL--YNVDAFPITVMFGMCSIFLLVASVLQRRLM 434 (452)
Q Consensus 393 ~~~~~~--~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (452)
....|. .++... ......++...|.++.+..+++.......+
T Consensus 78 Y~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~ 123 (372)
T PF00854_consen 78 YWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGR 123 (372)
T ss_dssp HHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCC
Confidence 444333 333222 111235777777777777776666554443
No 280
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=90.19 E-value=15 Score=35.05 Aligned_cols=128 Identities=6% Similarity=0.007 Sum_probs=68.1
Q ss_pred hccccccCC-CCCchH----HHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCC
Q 012965 270 WTPALSPND-EEIPHG----FIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKS 344 (452)
Q Consensus 270 ~~p~~~~~~-~~~~~~----~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (452)
++..|+.+. .+.+.. .++-...-..++.-++...+.|..+.|+ .+++..+...+...++.+....
T Consensus 25 fl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykp--viil~~~~~i~t~~lll~~~sv-------- 94 (412)
T PF01770_consen 25 FLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKP--VIILQALSYIITWLLLLFGTSV-------- 94 (412)
T ss_pred cchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhH--HHHHHHHHHHHHHHHHHHHCcH--------
Confidence 344455443 555442 3333334456666778888999998887 2433333333333333332222
Q ss_pred CCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh------hhHHHHHHHhccccCCchHH
Q 012965 345 GGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVM 415 (452)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~ 415 (452)
...-+.-+.+|...+ .....++++-..+|+++--++.|..+.+ .+.++|..+....+.++...
T Consensus 95 -------~~mq~~q~~yg~~~a-~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L 163 (412)
T PF01770_consen 95 -------LAMQLMQFFYGLATA-AEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQL 163 (412)
T ss_pred -------HHHHHHHHHHHHHHH-HHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH
Confidence 244455555665555 3455667777777887755565555543 33345555544444555444
No 281
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=89.67 E-value=7.7 Score=34.23 Aligned_cols=64 Identities=8% Similarity=0.004 Sum_probs=30.8
Q ss_pred CcchhhHHHHHHHHHHHHHHHhcccc--ccCCC-C-cchhHHHHHHHhhHHhhcchhHHHHHHHHHhh
Q 012965 196 GPVAPFDAAACFLAIGMVIILSSWTE--NYGDP-S-ESKDLLTQFRGAAVAIASDEKIALLGAIQSLF 259 (452)
Q Consensus 196 ~~~~~f~~~~~~~~~~~~~~~~~~~~--~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (452)
.|+..+.+.+++.++.++.....-.| ...+. + ++++...+.++...+.+|++..|.........
T Consensus 39 ~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~~k~~k~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~w 106 (267)
T PF07672_consen 39 NWQWILSIFILLIFIPLILYIIFGKNFDIYSPKEKQEKENSTLSKKPSYKSILKEKETWKWILIYGIW 106 (267)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccCcccccccccccccccchHHHHHccchHHHHHHHHHHH
Confidence 47777777666665544443322111 01111 1 11111112235667788888888766555443
No 282
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=88.16 E-value=27 Score=34.01 Aligned_cols=96 Identities=15% Similarity=0.180 Sum_probs=56.5
Q ss_pred hcCCCcchhHHHHHHHHhh-hhhccccccc---cccccCcchHHHHHHHHHHHHH-HH--hc---C-------------c
Q 012965 66 TYGFGKGEIGQLFIAGFGS-SMLFGTIVGS---LADKQGRKRACVTYCLTYILSC-IT--KH---S-------------P 122 (452)
Q Consensus 66 ~~g~s~~~~g~~~~~~~~~-~~l~~~~~G~---l~Dr~Grr~~l~~~~~~~~i~~-l~--~~---~-------------~ 122 (452)
..+.+...+-.+.+..... ..+++.+.+. =.+|+||++.+..+..+..++. +. .. + +
T Consensus 272 ~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~ 351 (461)
T KOG3098|consen 272 KLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTP 351 (461)
T ss_pred hccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCccccccccc
Confidence 3444444443333333322 2344444444 4567899999999988887654 32 11 1 2
Q ss_pred cHHHHHHHHHHHHhHhhhhhhhhhhhhhhhc--ccccchhhH
Q 012965 123 QYKILMIGRILGGIATSLLFSAFESWLVAEH--NKRGFEQQW 162 (452)
Q Consensus 123 ~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~--~~r~~~~~~ 162 (452)
++....+.-++.|++.+........ ++.+. ++|....+.
T Consensus 352 ~~~~~~ii~~l~G~~D~~~~t~~~~-ii~~~~~~~~~~~fsi 392 (461)
T KOG3098|consen 352 SYYLALIIGFLLGFGDACFNTQRYV-IIALLYPDDRAQAFSL 392 (461)
T ss_pred chhHHHHHHHHHhhHHHHHHHHHHH-HHHHHhcCchHHHHHH
Confidence 4557778889999999988776633 65554 445554443
No 283
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=87.75 E-value=10 Score=35.64 Aligned_cols=137 Identities=13% Similarity=-0.024 Sum_probs=61.4
Q ss_pred cchhHHHHHHHHHhhhchhhhhhhhhcccccc-CCCCCchHHHHHHHHHHHHHHhHHHHHHhc-----cCCCCchhHHHH
Q 012965 245 SDEKIALLGAIQSLFEGSMYTFVFLWTPALSP-NDEEIPHGFIFATFMLASMLGSSLASRLMA-----RSPPRVESYMQI 318 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~g~l~d-----r~g~~~~~~~~~ 318 (452)
++++-..+.+..-+.++.-++. ..-.|.+++ .+.+.+.--.++. .---.---+++..+.| |+|||+. ++.-
T Consensus 28 ~d~~~illLl~LYllQGiP~GL-~~~iP~lL~ak~vSyt~~a~fS~-ay~P~sLKllWaPiVDs~y~k~~Grrks-Wvvp 104 (510)
T KOG3574|consen 28 GDRSSILLLLFLYLLQGIPLGL-IGAIPLLLQAKGVSYTSQAIFSF-AYWPFSLKLLWAPIVDSVYSKRFGRRKS-WVVP 104 (510)
T ss_pred hhhhhHHHHHHHHHHcCCchhH-hhhhHHHhcCCCcchhhhhhhhh-hhhHHHHHHHHHhhhHHHHHHhhccccc-eeee
Confidence 3444334434444455554553 447888777 2222222111111 1111112345666666 9999985 4444
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccch
Q 012965 319 VFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTI 388 (452)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~ 388 (452)
+..+.+..+..+......-...++..++. ......+++..+..+.-......+......+++-|-+
T Consensus 105 ~q~llG~~mllLs~~v~~~~g~ng~~p~v----~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgya 170 (510)
T KOG3574|consen 105 CQYLLGLFMLLLSYLVDRGLGGNGGLPNV----VALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYA 170 (510)
T ss_pred hHHHHHHHHHHHhhCCCcccccCCCCcch----HHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCch
Confidence 44555555554433222111111111111 1222234445555554445566666667666665543
No 284
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=86.50 E-value=34 Score=33.39 Aligned_cols=68 Identities=15% Similarity=0.061 Sum_probs=40.2
Q ss_pred HHHHHhhhhhhhhHHHHHhhcCCC---cchhHHHHHHHHh-hhhhccccccccccccCcchHHHHHHHHHHH
Q 012965 47 SLMMAGDWLQGPYVYYLYSTYGFG---KGEIGQLFIAGFG-SSMLFGTIVGSLADKQGRKRACVTYCLTYIL 114 (452)
Q Consensus 47 ~~~~~~~~~~~p~l~~i~~~~g~s---~~~~g~~~~~~~~-~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i 114 (452)
.+.++.-.+...++-.+.+.+.++ +..+..+-..... .+.+..++.+++.+++.|.+++-..+..+..
T Consensus 33 ~Ll~f~I~~ny~~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~ 104 (509)
T COG3202 33 ALLFFCILFNYNLLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLG 104 (509)
T ss_pred HHHHHHHHHHHHHHHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Confidence 333333333333444556666554 3344444444444 3445556789999999999988777665544
No 285
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=83.48 E-value=43 Score=32.02 Aligned_cols=86 Identities=17% Similarity=0.287 Sum_probs=54.4
Q ss_pred CCchHHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHH
Q 012965 280 EIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFC 359 (452)
Q Consensus 280 ~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (452)
+.+.+.+.....+-.++..++..+..+|+..+.. ......+..++++...+.... +.-+++..
T Consensus 58 ~~~t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~R--i~~~~~l~~~g~l~va~~~~v---------------~~~l~Gv~ 120 (402)
T PF02487_consen 58 SVSTGAVLLADILPSLLVKLIAPFFIHRVPYWIR--ILICVALSAAGMLLVAFSPSV---------------WVRLLGVV 120 (402)
T ss_pred cccchHHHHHHHHHHHHHHHHhHhhhhhccchHH--HHHHHHHHHHHHhheeeccch---------------hHHHHHHH
Confidence 3445666666667788888899999998865441 334444444444444332222 46678888
Q ss_pred HHHHHhhchhhHHHHHHhhcCCcc
Q 012965 360 TFEACVGIFWPSIMKMRSQYIPEE 383 (452)
Q Consensus 360 ~~g~~~~~~~~~~~~~~~~~~p~~ 383 (452)
+.+++.|..-.....+.. .+|+.
T Consensus 121 las~ssg~GE~tfL~lt~-~y~~~ 143 (402)
T PF02487_consen 121 LASLSSGLGEVTFLSLTH-FYGKS 143 (402)
T ss_pred HHhhhhhhhHHHHHHHHH-hcCcc
Confidence 888888877776666654 55554
No 286
>PRK03612 spermidine synthase; Provisional
Probab=81.77 E-value=33 Score=34.27 Aligned_cols=25 Identities=12% Similarity=0.174 Sum_probs=16.4
Q ss_pred HHHHHHHHHhhchhhHHHHHHhhcC
Q 012965 356 LGFCTFEACVGIFWPSIMKMRSQYI 380 (452)
Q Consensus 356 ~~~~~~g~~~~~~~~~~~~~~~~~~ 380 (452)
...++.++..|+..|....+..+..
T Consensus 115 ~~~~~~~~l~G~~~Pl~~~~~~~~~ 139 (521)
T PRK03612 115 VLVLLIGLLIGMEIPLLMRILQRIR 139 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3445567778877787777666543
No 287
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=80.56 E-value=2.9 Score=42.74 Aligned_cols=124 Identities=15% Similarity=0.158 Sum_probs=79.4
Q ss_pred cCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCC------------
Q 012965 276 PNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPS------------ 340 (452)
Q Consensus 276 ~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 340 (452)
++.++.+. |.+...+-++..+...+..+...|..|.+ ++..+..+.+++.++..+-....+++
T Consensus 124 ErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr--~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~ 201 (735)
T KOG3626|consen 124 ERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPR--WIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVE 201 (735)
T ss_pred hhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccc--eeeechhHHHHHHHHHhChHHhcCcchhhhhhhhcccc
Confidence 44455433 56666666888888888888888876555 46666666666655544321111111
Q ss_pred -C--------------------cCC----CCcccchhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh
Q 012965 341 -N--------------------VKS----GGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (452)
Q Consensus 341 -~--------------------~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (452)
+ +.. .+-.....+++.+.++.|+|....++...+++-|.+.+++.+...|+....
T Consensus 202 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~ 281 (735)
T KOG3626|consen 202 NPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSM 281 (735)
T ss_pred CCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHH
Confidence 0 000 111113346778899999999999999999999999999888888876653
Q ss_pred --hhHHHH
Q 012965 396 --LNIFVC 401 (452)
Q Consensus 396 --~~~~~~ 401 (452)
.|+++|
T Consensus 282 ~~lGPaiG 289 (735)
T KOG3626|consen 282 AILGPAIG 289 (735)
T ss_pred HHhhhHHH
Confidence 455444
No 288
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=79.72 E-value=28 Score=33.70 Aligned_cols=107 Identities=18% Similarity=0.073 Sum_probs=67.0
Q ss_pred hhcCCCcchhHHHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHHHH----HHhcC---c----cHHHHHHHHHH
Q 012965 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC----ITKHS---P----QYKILMIGRIL 133 (452)
Q Consensus 65 ~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~----l~~~~---~----~~~~l~~~r~l 133 (452)
..-|+++.++|..=+.+.+.+..+.....++.+|+|..|.=..+...-.... ..-+. + +...++.+-.+
T Consensus 286 ~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~ 365 (432)
T PF06963_consen 286 KSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIAL 365 (432)
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHH
Confidence 3349999999988888888888888889999999999888777766443321 11122 2 22344444444
Q ss_pred HHhHhhhhhhhhhhhhhhhc---ccccchhhHHHHHHHHHHH
Q 012965 134 GGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIF 172 (452)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~ 172 (452)
.-+|.=.......- ++.|. ++|+...+.+.+..+..-.
T Consensus 366 SR~GLW~fDL~~~q-i~Qe~V~~~~Rg~v~gvq~sl~~lf~l 406 (432)
T PF06963_consen 366 SRIGLWSFDLAVTQ-IMQENVPESERGAVSGVQNSLQSLFEL 406 (432)
T ss_pred HHHHHHhhhHHHHH-hhcccCCHHHhhHHHHHHHHHHHHHHH
Confidence 44444444444433 55665 5677777766666554433
No 289
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=76.72 E-value=10 Score=26.99 Aligned_cols=60 Identities=22% Similarity=0.322 Sum_probs=38.1
Q ss_pred hhhccccccCCCCCch---HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHH
Q 012965 268 FLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLP 330 (452)
Q Consensus 268 ~~~~p~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 330 (452)
+..+|...+| .+.+. +.+.+.+.++..+|.+...++.++..+++ .+..+.....+.....
T Consensus 12 TplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~--~~~~~l~~~~~~~~~m 74 (85)
T PF06779_consen 12 TPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRR--LLRAGLLLTVLSTAAM 74 (85)
T ss_pred HhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHH--HHHHHHHHHHHHHHHH
Confidence 4456655544 34433 67888888999999999999988854444 3444444444444443
No 290
>COG4769 Predicted membrane protein [Function unknown]
Probab=71.51 E-value=14 Score=29.66 Aligned_cols=46 Identities=13% Similarity=0.107 Sum_probs=32.7
Q ss_pred hccccccccccccCcchHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHhH
Q 012965 87 LFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIA 137 (452)
Q Consensus 87 l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~l~~~~~~~~~l~~~r~l~G~~ 137 (452)
+.+...-++..++|+|..=.+ ++++..++.+|..++.+.+++.+-.
T Consensus 88 i~S~L~m~~l~~f~~k~~S~l-----giS~mGaF~hNl~QLivas~Lv~~~ 133 (181)
T COG4769 88 ILSTLFMYFLYQFGPKYLSLL-----GISVMGAFTHNLGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHcCCceEeee-----ehhhHHHHHHhHHHHHHHHHHHhcc
Confidence 444456677889998875332 3344568889999999999987743
No 291
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=71.08 E-value=37 Score=30.35 Aligned_cols=79 Identities=11% Similarity=0.194 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCCcCCCCcccchhhHHHHHHHHHH
Q 012965 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (452)
Q Consensus 284 ~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 363 (452)
|.++...-...++...+.|-++||.|||+. .+..++.-+.+++ ..+. |+ . .+.+++-.+-|+
T Consensus 75 gqLfiaGfgSsmLFGtivgSLaDkqGRKra---cvtycitYiLsCi---TKhS--pq------Y----kVLmVGR~LGGi 136 (454)
T KOG4332|consen 75 GQLFIAGFGSSMLFGTIVGSLADKQGRKRA---CVTYCITYILSCI---TKHS--PQ------Y----KVLMVGRVLGGI 136 (454)
T ss_pred ceeeecccchHHHHHHHHHHHHhhhccccc---eeeehHHHHHHHH---hhcC--Cc------e----EEEeehhhhhhH
Confidence 555444334466667788899999999983 2222222222222 1111 11 0 245666677777
Q ss_pred HhhchhhHHHH-HHhhcC
Q 012965 364 CVGIFWPSIMK-MRSQYI 380 (452)
Q Consensus 364 ~~~~~~~~~~~-~~~~~~ 380 (452)
.....++..-+ ++.|..
T Consensus 137 aTsLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 137 ATSLLFSAFESWLIAEHN 154 (454)
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 76666655443 455554
No 292
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=69.64 E-value=69 Score=27.15 Aligned_cols=28 Identities=25% Similarity=0.376 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 012965 164 SITFSKAIFLGNGLVAILSGLFGNLLVD 191 (452)
Q Consensus 164 ~~~~~~~~~~g~~ig~~~~~~l~~~l~~ 191 (452)
...++.+-.+++.+-..+...++..+.+
T Consensus 35 ~l~y~~GRi~sY~llG~l~g~~G~~l~~ 62 (199)
T PF13386_consen 35 HLLYNLGRILSYTLLGALAGLLGSGLSL 62 (199)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777777776666666666666543
No 293
>COG2119 Predicted membrane protein [Function unknown]
Probab=67.54 E-value=58 Score=27.02 Aligned_cols=24 Identities=13% Similarity=0.145 Sum_probs=19.7
Q ss_pred cccccccccCcchHHHHHHHHHHH
Q 012965 91 IVGSLADKQGRKRACVTYCLTYIL 114 (452)
Q Consensus 91 ~~G~l~Dr~Grr~~l~~~~~~~~i 114 (452)
.+.+++||+..|++-..+.+++.+
T Consensus 153 ~G~~ia~ki~~r~l~~~aallFl~ 176 (190)
T COG2119 153 LGKLIAGKLPERLLRFIAALLFLI 176 (190)
T ss_pred HHHHHHccCCHHHHHHHHHHHHHH
Confidence 477899999999988888777755
No 294
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=60.93 E-value=1.8e+02 Score=28.85 Aligned_cols=27 Identities=11% Similarity=0.149 Sum_probs=22.3
Q ss_pred HHHHHHhhcCCcccccchhhhhhhhhh
Q 012965 371 SIMKMRSQYIPEEARSTIMNFFRIPLN 397 (452)
Q Consensus 371 ~~~~~~~~~~p~~~r~~~~g~~~~~~~ 397 (452)
..|.+++|.++.++..+-+++.....+
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~gan 190 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGAN 190 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 579999999999998888888777533
No 295
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=57.62 E-value=10 Score=27.98 Aligned_cols=31 Identities=29% Similarity=0.289 Sum_probs=19.3
Q ss_pred HHHHhhhhhcccccccccccc-CcchHHHHHH
Q 012965 79 IAGFGSSMLFGTIVGSLADKQ-GRKRACVTYC 109 (452)
Q Consensus 79 ~~~~~~~~l~~~~~G~l~Dr~-Grr~~l~~~~ 109 (452)
+.-++.+.+.+...||+.||| |.++..++..
T Consensus 49 ssefIsGilVGa~iG~llD~~agTsPwglIv~ 80 (116)
T COG5336 49 SSEFISGILVGAGIGWLLDKFAGTSPWGLIVF 80 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 444555666666788999986 5555444433
No 296
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=54.63 E-value=5 Score=36.91 Aligned_cols=51 Identities=12% Similarity=0.137 Sum_probs=3.6
Q ss_pred hhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhhh--hhHHHHH
Q 012965 352 SLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP--LNIFVCV 402 (452)
Q Consensus 352 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~--~~~~~~~ 402 (452)
+..++..+++++..|-.......+..+..++++|..+-.+.++. .|...|.
T Consensus 249 ~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs 301 (309)
T PF01733_consen 249 AWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGS 301 (309)
T ss_dssp ------------------HHHH-------------------------------
T ss_pred HHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566788889999988888899999999988877665554433 3444443
No 297
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=54.06 E-value=63 Score=28.00 Aligned_cols=102 Identities=16% Similarity=-0.005 Sum_probs=56.0
Q ss_pred hhHHHHHHHHHHHHHhhccccccCCCCCCccchhhHHHHHHH--HHHHHhhhhhhhhHHHHHhhcCCCcchhHHHHHHHH
Q 012965 5 FYLVFGALGAVVAALELSKTNKDRINTSSAFNSFKNNYLLVY--SLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGF 82 (452)
Q Consensus 5 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~l~~i~~~~g~s~~~~g~~~~~~~ 82 (452)
+.-.+.++.++..-++..++-+.+.+|.+ ++..+....-| ++....... ....+..+++..++|......+
T Consensus 69 ~~h~imal~li~~Gi~ti~~W~~~~~~~s--~~t~lal~~PCPvCl~Ai~~S~-----~l~a~~~~~s~~~ig~~~g~if 141 (224)
T PF09930_consen 69 VIHLIMALLLIYAGIYTIKKWKKSGKDSS--RRTFLALSLPCPVCLTAIFFSI-----MLLAPSIGLSGWEIGLVLGLIF 141 (224)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccCCCCc--ccchhhhhcCchHHHHHHHHHH-----HHHHHhcCchHHHHHHHHHHHH
Confidence 34556667777777776655433333321 11112222222 222221111 1334667889999987666655
Q ss_pred hhhhhccccccccccccCcchHHHHHHHHHHHHH
Q 012965 83 GSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC 116 (452)
Q Consensus 83 ~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~ 116 (452)
.... .....+.+|.+.|+....+.....+|.
T Consensus 142 ~i~i---l~ss~i~r~~~~~~p~~LG~~Mi~~Gl 172 (224)
T PF09930_consen 142 FILI---LLSSFIFRRLKKPYPIILGNFMIFLGL 172 (224)
T ss_pred HHHH---HHHHHHHHHhcCCCchHHHHHHHHHHH
Confidence 5344 346677788887777777877776663
No 298
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=50.47 E-value=2.5e+02 Score=27.36 Aligned_cols=32 Identities=6% Similarity=0.168 Sum_probs=22.1
Q ss_pred hhHHHHHHHHHHHhhchhhHHHHHHhhcCCccc
Q 012965 352 SLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA 384 (452)
Q Consensus 352 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~ 384 (452)
+..+...++.+++.+...+....+++. +|++.
T Consensus 107 ~~~~~~v~~~g~~~~~~q~s~~gla~~-fp~~~ 138 (437)
T TIGR00939 107 VTTMASVVIINSGMALLQGSLFGLAGV-FPSTY 138 (437)
T ss_pred HHHHHHHHHHHhhhhhhcccchhhccc-CCHHH
Confidence 455566667788888777778887774 56655
No 299
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=48.94 E-value=2.5e+02 Score=26.83 Aligned_cols=41 Identities=12% Similarity=0.229 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHhhchhhHHHHHHhhcCCcccccchhhhhhh
Q 012965 354 QLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (452)
Q Consensus 354 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (452)
+.++.....+|.=+..+...-..+|..|+++|..+.|.-+.
T Consensus 389 l~agVaaaR~GLW~fDlAVtqimQe~VpEseR~vv~gvqns 429 (503)
T KOG2601|consen 389 LFAGVAAARLGLWMFDLAVTQIMQETVPESERCVVFGVQNS 429 (503)
T ss_pred HHHHHHHHHhhHHhccHHHHHHHHHhcchhhhhhhHhHHHH
Confidence 33444444444444446677788999999999999988664
No 300
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=48.05 E-value=1.8e+02 Score=29.06 Aligned_cols=27 Identities=15% Similarity=0.244 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHhHHHHHHhccCCCCc
Q 012965 286 IFATFMLASMLGSSLASRLMARSPPRV 312 (452)
Q Consensus 286 ~~~~~~i~~~~~~~~~g~l~dr~g~~~ 312 (452)
......+.+.+++..++++-..++.++
T Consensus 302 ~i~~y~~~~~iaGy~S~~~yk~~~g~~ 328 (521)
T PF02990_consen 302 AIILYALTSFIAGYVSARLYKSFGGKK 328 (521)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHcCCCc
Confidence 334455667777777777777776544
No 301
>PF11395 DUF2873: Protein of unknown function (DUF2873); InterPro: IPR021532 This entry is represented by the human SARS coronavirus, Orf7b; it is a family of uncharacterised viral proteins.
Probab=48.03 E-value=30 Score=19.74 Aligned_cols=22 Identities=27% Similarity=0.306 Sum_probs=17.0
Q ss_pred hhHHHHHHHHHHHHHhhccccc
Q 012965 5 FYLVFGALGAVVAALELSKTNK 26 (452)
Q Consensus 5 ~~~~~~~~~~~~~~l~~~~~~~ 26 (452)
-|+|+.-++++|..+|++.-++
T Consensus 18 lflv~imliif~f~le~qdl~e 39 (43)
T PF11395_consen 18 LFLVIIMLIIFWFSLEIQDLNE 39 (43)
T ss_pred HHHHHHHHHHHHHHHhhhhhcc
Confidence 3678888899999999875443
No 302
>PF07332 DUF1469: Protein of unknown function (DUF1469); InterPro: IPR009937 This entry represents proteins found in hypothetical bacterial proteins where is is annotated as ycf49 or ycf49-like. The function is not known.
Probab=47.75 E-value=1.2e+02 Score=23.06 Aligned_cols=6 Identities=0% Similarity=0.329 Sum_probs=2.3
Q ss_pred HHHHHh
Q 012965 234 TQFRGA 239 (452)
Q Consensus 234 ~~~~~~ 239 (452)
++.+++
T Consensus 109 ~~l~~d 114 (121)
T PF07332_consen 109 AELKED 114 (121)
T ss_pred HHHHHH
Confidence 333333
No 303
>TIGR02123 TRAP_fused TRAP transporter, 4TM/12TM fusion protein. In some species, the 12-transmembrane spanning and 4-transmembrane spanning components of tripartite ATP-independent periplasmic (TRAP)-type transporters are fused. This model describes such transporters, found in the Archaea and in Bacteria.
Probab=47.52 E-value=1.9e+02 Score=29.58 Aligned_cols=26 Identities=19% Similarity=0.263 Sum_probs=14.0
Q ss_pred HHHHHhhhhhhhhHHHHHhhcCCCcc
Q 012965 47 SLMMAGDWLQGPYVYYLYSTYGFGKG 72 (452)
Q Consensus 47 ~~~~~~~~~~~p~l~~i~~~~g~s~~ 72 (452)
......+.+.++++|...++-|.|..
T Consensus 121 ~~~f~~Y~~~g~~~Pg~~~h~g~~~~ 146 (613)
T TIGR02123 121 ALVFLLYALFGPWLPGILRHRGYSLE 146 (613)
T ss_pred HHHHHHHHHHHhhCchhhccCCCCHH
Confidence 33344444456666766655555543
No 304
>PF11872 DUF3392: Protein of unknown function (DUF3392); InterPro: IPR021813 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.
Probab=36.96 E-value=62 Score=24.14 Aligned_cols=37 Identities=16% Similarity=0.199 Sum_probs=21.9
Q ss_pred HhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCC
Q 012965 242 AIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPND 278 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 278 (452)
...++.++..-.......+..+|+....|...++.+.
T Consensus 43 r~l~~~~Fi~Rt~~FIlicAFGYGll~v~~tP~l~~~ 79 (106)
T PF11872_consen 43 RLLSGYHFILRTLAFILICAFGYGLLIVWLTPLLARQ 79 (106)
T ss_pred HHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455556555555555556666776676766666543
No 305
>TIGR03717 R_switched_YjbE integral membrane protein, YjbE family. Rfam model RF00080 describes a structured RNA element called the yybP-ykoY leader, or SraF, which may precede one or several genes in a genome. Members of this highly hydrophobic protein family commonly are preceded by a yybP-ykoY leader, which may serve as a riboswitch. From the larger group of TerC homologs (pfam03741), this subfamily contains protein YjbE from Bacillus subtilis. A transport function is proposed.
Probab=36.27 E-value=1.9e+02 Score=24.01 Aligned_cols=22 Identities=14% Similarity=0.155 Sum_probs=15.5
Q ss_pred hHHHHHHHHHHHHHhhcccccc
Q 012965 6 YLVFGALGAVVAALELSKTNKD 27 (452)
Q Consensus 6 ~~~~~~~~~~~~~l~~~~~~~~ 27 (452)
+...+++.++-..++|-+++++
T Consensus 63 ~~iaGGllLl~ia~~ml~~~~~ 84 (176)
T TIGR03717 63 LKLIGGLLLLWIGWKLLLEEEE 84 (176)
T ss_pred HHHHHHHHHHHHHHHHHhcccc
Confidence 4567888888888888765443
No 306
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=33.53 E-value=4.4e+02 Score=25.33 Aligned_cols=34 Identities=12% Similarity=0.137 Sum_probs=24.1
Q ss_pred hhhHHHHHHHHHHHhhchhhHHHHHHhhcCCcccc
Q 012965 351 GSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEAR 385 (452)
Q Consensus 351 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r 385 (452)
-+..++...+.+.+.+..+...+...++. |++..
T Consensus 117 f~vt~~~vv~~~~a~a~~qgs~~G~a~~~-P~~yt 150 (406)
T KOG1479|consen 117 FLVTLIIVVLLNLANAVVQGSLYGLAGLF-PSEYT 150 (406)
T ss_pred HHHHHHHHHHHhhhhhhhccchhhhhhcC-CHHHH
Confidence 34566677778888888888888877775 55553
No 307
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=32.29 E-value=5.1e+02 Score=25.67 Aligned_cols=104 Identities=10% Similarity=0.031 Sum_probs=54.1
Q ss_pred HHHHHhHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHhhhc----CCCC-------cCCC-Ccccc-----hhhHH
Q 012965 293 ASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLV----APSN-------VKSG-GISFS-----GSLQL 355 (452)
Q Consensus 293 ~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-------~~~~-~~~~~-----~~~~~ 355 (452)
++++...+..++.++..+++ +...........+.+..+.-.+. ++++ +..+ ...+. -|...
T Consensus 74 ~avif~~iy~kl~~~lt~~~--vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s 151 (509)
T COG3202 74 SAVIFTIIYQKLLNILTREK--VFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYS 151 (509)
T ss_pred HHHHHHHHHHHHHhhcCHHH--HHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHH
Confidence 56777788899999987666 23333333333333322222211 1110 0011 11011 13333
Q ss_pred HHHHHHHHHhhchhh-HHHHHHhhcCCcccccchhhhhhhhhhH
Q 012965 356 LGFCTFEACVGIFWP-SIMKMRSQYIPEEARSTIMNFFRIPLNI 398 (452)
Q Consensus 356 ~~~~~~g~~~~~~~~-~~~~~~~~~~p~~~r~~~~g~~~~~~~~ 398 (452)
..+.....--....+ ..|..++|+...++..+-+++.+...|.
T Consensus 152 ~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni 195 (509)
T COG3202 152 LFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANI 195 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHH
Confidence 444443433333333 6788999999999988888887776433
No 308
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=31.63 E-value=1.1e+02 Score=24.73 Aligned_cols=29 Identities=10% Similarity=0.031 Sum_probs=21.5
Q ss_pred hHHHHHHhhcCCcccccchhhhhhhhhhH
Q 012965 370 PSIMKMRSQYIPEEARSTIMNFFRIPLNI 398 (452)
Q Consensus 370 ~~~~~~~~~~~p~~~r~~~~g~~~~~~~~ 398 (452)
.+.|...+-..+++.-|+..|+-.+--|.
T Consensus 113 GisYGilSaSWD~~r~GSllG~~e~~~N~ 141 (153)
T PF11947_consen 113 GISYGILSASWDPEREGSLLGWEEFKRNW 141 (153)
T ss_pred hhhhhhcccccCCCCCCCcccHHHHHHhH
Confidence 45677778888888889998887665444
No 309
>PF03222 Trp_Tyr_perm: Tryptophan/tyrosine permease family; InterPro: IPR018227 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell. A number of such proteins have been found to be evolutionary related [, , ]. Aromatic amino acids are concentrated in the cytoplasm of Escherichia coli by 4 distinct transport systems: a general aromatic amino acid permease, and a specific permease for each of the 3 types (Phe, Tyr and Trp) []. It has been shown [] that some permeases in E. coli and related bacteria are evolutionary related. These permeases are proteins of about 400 to 420 amino acids and are located in the cytoplasmic membrane and, like bacterial sugar/cation transporters, are thought to contain 12 transmembrane (TM) regions [] - hydropathy analysis, however, is inconclusive, suggesting the possibility of 10 to 12 membrane-spanning domains []. The best conserved domain is a stretch of 20 residues which seems to be located in a cytoplasmic loop between the first and second transmembrane region.
Probab=31.29 E-value=4.8e+02 Score=25.01 Aligned_cols=25 Identities=24% Similarity=0.218 Sum_probs=13.7
Q ss_pred hHHHHHHHHHHHhhchhhHHHHHHh
Q 012965 353 LQLLGFCTFEACVGIFWPSIMKMRS 377 (452)
Q Consensus 353 ~~~~~~~~~g~~~~~~~~~~~~~~~ 377 (452)
...+...+..+++-...|....+..
T Consensus 187 ~~~lPv~~~Sf~f~~ivPsl~~~~~ 211 (394)
T PF03222_consen 187 LPALPVLVFSFGFHNIVPSLVKYLG 211 (394)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHhC
Confidence 4455566666666555555554443
No 310
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=30.38 E-value=1.1e+02 Score=25.68 Aligned_cols=14 Identities=21% Similarity=0.430 Sum_probs=10.0
Q ss_pred ccccccccccCcch
Q 012965 90 TIVGSLADKQGRKR 103 (452)
Q Consensus 90 ~~~G~l~Dr~Grr~ 103 (452)
+..+...|||||+-
T Consensus 153 p~i~~~leryg~~l 166 (191)
T PF03596_consen 153 PIIAEFLERYGRWL 166 (191)
T ss_pred hHHHHHHHHhcccH
Confidence 34677888888764
No 311
>PRK11469 hypothetical protein; Provisional
Probab=29.69 E-value=2.9e+02 Score=23.24 Aligned_cols=25 Identities=8% Similarity=-0.035 Sum_probs=18.2
Q ss_pred ccccccccCcchHHHHHHHHHHHHH
Q 012965 92 VGSLADKQGRKRACVTYCLTYILSC 116 (452)
Q Consensus 92 ~G~l~Dr~Grr~~l~~~~~~~~i~~ 116 (452)
+.++.+++|||.-++-+.++..++.
T Consensus 155 G~~~g~~~g~~a~~lgG~iLI~iGi 179 (188)
T PRK11469 155 GRFIGSIIGKKAEILGGLVLIGIGV 179 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456667888888877777777775
No 312
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=29.52 E-value=5e+02 Score=24.66 Aligned_cols=76 Identities=11% Similarity=-0.018 Sum_probs=49.2
Q ss_pred HHHHHHHhhhhhccccccccccccCcchHHHHHHHHHHH-HH--HHhcCccHHHHHHHHHHHHhHhhhhhhhhhhhhhhh
Q 012965 76 QLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL-SC--ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAE 152 (452)
Q Consensus 76 ~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~i-~~--l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e 152 (452)
.+=.+..+.|.+.....|.+--++.|+.-++++..-..- ++ +++-+++.|..+++-++.+.......+.+.. -+++
T Consensus 275 ~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~-~iA~ 353 (433)
T KOG3810|consen 275 AVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATF-QIAR 353 (433)
T ss_pred HHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHH-HHHH
Confidence 444455555667777889988888776555444442222 33 5677899998888888877776666666544 3443
No 313
>TIGR02106 cyd_oper_ybgT cyd operon protein YbgT. This model describes a very small (as short as 33 amino acids) protein of unknown function, essentially always found in an operon with CydAB, subunits of the cytochrome d terminal oxidase. It begins with an aromatic motif MWYFXW and appears to contain a membrane-spanning helix. This protein appears to be restricted to the Proteobacteria and exist in a single copy only. We suggest it may be a membrane subunit of the terminal oxidase. The family is named after the E. coli member YbgT. This model excludes the apparently related protein YccB.
Probab=27.82 E-value=78 Score=17.45 Aligned_cols=18 Identities=11% Similarity=-0.027 Sum_probs=13.4
Q ss_pred chhhHHHHHHHHHHHHHh
Q 012965 3 MFFYLVFGALGAVVAALE 20 (452)
Q Consensus 3 ~~~~~~~~~~~~~~~~l~ 20 (452)
|.||+=+.++.+.|++--
T Consensus 1 MWYfaWilG~~lA~~~~v 18 (30)
T TIGR02106 1 MWYFAWILGTLLACAFGV 18 (30)
T ss_pred ChhHHHHHHHHHHHHHHH
Confidence 578888888888777643
No 314
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=27.66 E-value=3.8e+02 Score=22.66 Aligned_cols=12 Identities=8% Similarity=0.323 Sum_probs=8.5
Q ss_pred hhhhccccccCC
Q 012965 267 VFLWTPALSPND 278 (452)
Q Consensus 267 ~~~~~p~~~~~~ 278 (452)
+..|.|.+....
T Consensus 113 igIYiP~Fa~~s 124 (191)
T PF03596_consen 113 IGIYIPLFASLS 124 (191)
T ss_pred EEEeehhhhcCC
Confidence 477888887654
No 315
>PF08173 YbgT_YccB: Membrane bound YbgT-like protein; InterPro: IPR012994 This family contains a set of membrane proteins, typically 33 amino acids long. The family has no known function, but the protein is found in the operon CydAB in Escherichia coli. Members have a consensus motif (MWYFXW), which is rich in aromatic residues. The protein forms a single membrane-spanning helix. This family seems to be restricted to proteobacteria [].
Probab=26.68 E-value=85 Score=16.99 Aligned_cols=17 Identities=12% Similarity=0.069 Sum_probs=12.4
Q ss_pred chhhHHHHHHHHHHHHH
Q 012965 3 MFFYLVFGALGAVVAAL 19 (452)
Q Consensus 3 ~~~~~~~~~~~~~~~~l 19 (452)
|.||+=+.+..+.|.+-
T Consensus 1 MWYfaWilG~~lA~~~~ 17 (28)
T PF08173_consen 1 MWYFAWILGVLLACAFG 17 (28)
T ss_pred ChhHHHHHHHHHHHHHH
Confidence 57888888887777653
No 316
>PRK11588 hypothetical protein; Provisional
Probab=26.10 E-value=6.7e+02 Score=25.02 Aligned_cols=38 Identities=11% Similarity=0.103 Sum_probs=19.8
Q ss_pred ccccccccCcchHHHH--HHHHHHHH-HHHhcCccHHHHHH
Q 012965 92 VGSLADKQGRKRACVT--YCLTYILS-CITKHSPQYKILMI 129 (452)
Q Consensus 92 ~G~l~Dr~Grr~~l~~--~~~~~~i~-~l~~~~~~~~~l~~ 129 (452)
.+++.+|++.|..+++ .+.+++++ +..+.++....++-
T Consensus 136 i~~l~~k~~~~~~llIpil~~lFsl~G~~~G~~Ee~i~f~p 176 (506)
T PRK11588 136 ILALIRKTRGNEILFIPVLFILFSLGGAVFGMGEEAIAFAI 176 (506)
T ss_pred HHHHHHHhCCCcEEeHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 3567888876643333 34444443 34555554444433
No 317
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=24.62 E-value=6.6e+02 Score=24.45 Aligned_cols=24 Identities=17% Similarity=-0.038 Sum_probs=15.6
Q ss_pred hHHHHHHhhcCCcccccchhhhhh
Q 012965 370 PSIMKMRSQYIPEEARSTIMNFFR 393 (452)
Q Consensus 370 ~~~~~~~~~~~p~~~r~~~~g~~~ 393 (452)
.....|.........|+..++..-
T Consensus 364 ~Li~~Y~~~vl~~~k~~~~~~~~L 387 (430)
T PF06123_consen 364 GLISLYLSSVLKSWKRGLIFAGLL 387 (430)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHH
Confidence 445566777777777777765433
No 318
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=24.40 E-value=1.5e+02 Score=26.48 Aligned_cols=44 Identities=16% Similarity=0.323 Sum_probs=31.7
Q ss_pred HHHhhcCCCcchhHHHHHHHHhhhhhcccccccc---------ccccCcchHH
Q 012965 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSL---------ADKQGRKRAC 105 (452)
Q Consensus 62 ~i~~~~g~s~~~~g~~~~~~~~~~~l~~~~~G~l---------~Dr~Grr~~l 105 (452)
-..++-|.++..-..++..+.+...+..|+.|.. .||+|||+..
T Consensus 42 lfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~w 94 (412)
T KOG4830|consen 42 LFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW 94 (412)
T ss_pred HHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeee
Confidence 3446778888887777777777677776776643 4699998864
No 319
>PRK11469 hypothetical protein; Provisional
Probab=24.39 E-value=4.3e+02 Score=22.21 Aligned_cols=19 Identities=16% Similarity=0.092 Sum_probs=9.7
Q ss_pred HHHHhHHHHHHhccCCCCc
Q 012965 294 SMLGSSLASRLMARSPPRV 312 (452)
Q Consensus 294 ~~~~~~~~g~l~dr~g~~~ 312 (452)
...|..++.++.+++++|.
T Consensus 148 ~~~G~~lG~~~g~~~g~~a 166 (188)
T PRK11469 148 STLGMMVGRFIGSIIGKKA 166 (188)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444445555555666554
No 320
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=23.59 E-value=5.4e+02 Score=23.07 Aligned_cols=70 Identities=17% Similarity=0.225 Sum_probs=38.1
Q ss_pred HHHHHHHhhhhhcccc-ccccccc-cCcchHHH----HHHHHHHHHHHHh--cCc----cHHHHHHHHHHHHhHhhhhhh
Q 012965 76 QLFIAGFGSSMLFGTI-VGSLADK-QGRKRACV----TYCLTYILSCITK--HSP----QYKILMIGRILGGIATSLLFS 143 (452)
Q Consensus 76 ~~~~~~~~~~~l~~~~-~G~l~Dr-~Grr~~l~----~~~~~~~i~~l~~--~~~----~~~~l~~~r~l~G~~~~~~~~ 143 (452)
.++.+.+..+...+|+ .|++... +.||+-+. .+.++..++.+++ ..+ +...+++.-++.|...=+..+
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 4555666667766654 6777764 44555443 2233334444332 221 355777788888876544444
Q ss_pred hh
Q 012965 144 AF 145 (452)
Q Consensus 144 ~~ 145 (452)
+.
T Consensus 224 Vi 225 (267)
T PF07672_consen 224 VI 225 (267)
T ss_pred HH
Confidence 43
No 321
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=22.66 E-value=6.4e+02 Score=23.64 Aligned_cols=57 Identities=9% Similarity=0.067 Sum_probs=38.7
Q ss_pred hhhccccccccccccCcchHHHHHHHHHH--HHH--HHhcCccHHHHHHHHHHHHhHhhhh
Q 012965 85 SMLFGTIVGSLADKQGRKRACVTYCLTYI--LSC--ITKHSPQYKILMIGRILGGIATSLL 141 (452)
Q Consensus 85 ~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~--i~~--l~~~~~~~~~l~~~r~l~G~~~~~~ 141 (452)
+.+.+++.+++.++.|.-+.+..+.++.. -+. ....++|......+..+.|.-.|..
T Consensus 59 a~~l~~vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~T 119 (354)
T PF04346_consen 59 AAFLSPVIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGAT 119 (354)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhccc
Confidence 55667778888889998888887766653 222 3467777777766666666655544
No 322
>PRK11715 inner membrane protein; Provisional
Probab=22.03 E-value=7.5e+02 Score=24.14 Aligned_cols=24 Identities=13% Similarity=-0.139 Sum_probs=15.8
Q ss_pred hHHHHHHhhcCCcccccchhhhhh
Q 012965 370 PSIMKMRSQYIPEEARSTIMNFFR 393 (452)
Q Consensus 370 ~~~~~~~~~~~p~~~r~~~~g~~~ 393 (452)
.....|.........|+..++..-
T Consensus 370 ~li~~Y~~~vl~~~k~g~~~~~~L 393 (436)
T PRK11715 370 LLIGFYLSAVLRSWKRGLLFAAAL 393 (436)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHH
Confidence 345566777777777887775543
No 323
>PRK14749 hypothetical protein; Provisional
Probab=21.78 E-value=1.2e+02 Score=16.52 Aligned_cols=17 Identities=18% Similarity=0.299 Sum_probs=12.0
Q ss_pred chhhHHHHHHHHHHHHH
Q 012965 3 MFFYLVFGALGAVVAAL 19 (452)
Q Consensus 3 ~~~~~~~~~~~~~~~~l 19 (452)
|-||+=+.++.+.|++-
T Consensus 1 MWYfaWiLG~~lAc~f~ 17 (30)
T PRK14749 1 MWYLLWFVGILLMCSLS 17 (30)
T ss_pred ChHHHHHHHHHHHHHHH
Confidence 45777778877777653
No 324
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=20.70 E-value=2.8e+02 Score=22.10 Aligned_cols=49 Identities=20% Similarity=0.230 Sum_probs=21.0
Q ss_pred hHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHhhhhhhCCCCCCCC
Q 012965 397 NIFVCVVLYNVDAFPITVMFGMCSIFLLVASVLQRRLMVIADKPSEFNP 445 (452)
Q Consensus 397 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (452)
+.+++.++.+..+..-........+.....++..++..|+.+++...+|
T Consensus 88 ~l~v~~~La~~L~~~e~~~~~~~~lg~~l~fl~~r~ysRkl~~~~~~Qp 136 (150)
T COG3086 88 GLFLGAILAQYLFFSELIVIFGAFLGLALGFLLARRYSRKLAKRTEWQP 136 (150)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCC
Confidence 4455555544322222333333333334455555555555444444433
No 325
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=20.13 E-value=6.6e+02 Score=22.81 Aligned_cols=61 Identities=21% Similarity=0.320 Sum_probs=28.9
Q ss_pred HhhcchhHHHHHHHHHhhhchhhhhhhhhccccccCCCCCchHHHHHHHHHHHHH-HhHHHHHHhccCC
Q 012965 242 AIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASML-GSSLASRLMARSP 309 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~g~l~dr~g 309 (452)
+..|+|+.+.............+. ...|.|. ++...+.+.-+-++-+.+++ |.. .+-||+.
T Consensus 64 ~~~~~p~~~~~~~l~a~li~~nW~-lfiWAvn---~g~~leaSLGY~InPL~~VllG~l---flkErls 125 (293)
T COG2962 64 QLLKQPKTLLMLALTALLIGLNWW-LFIWAVN---NGHVLEASLGYFINPLVNVLLGRL---FLKERLS 125 (293)
T ss_pred HHHhCcHHHHHHHHHHHHHHHHHH-HhheecC---CCchhHHHhHHHHHHHHHHHHHHH---HHHhhcc
Confidence 356677666655554444433332 3445543 22333445544444444333 333 3567773
Done!