Query 012967
Match_columns 452
No_of_seqs 205 out of 388
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 19:42:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012967.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012967hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1i07_A Epidermal growth factor 31.7 40 0.0014 24.1 3.4 23 331-353 32-54 (60)
2 1gcq_C VAV proto-oncogene; SH3 29.6 48 0.0016 24.4 3.6 21 330-351 42-64 (70)
3 1csk_A C-SRC SH3 domain; phosp 26.4 52 0.0018 24.4 3.3 24 330-353 43-66 (71)
4 3eg3_A Proto-oncogene tyrosine 25.9 57 0.0019 23.3 3.4 22 330-352 37-58 (63)
5 2x3w_D Syndapin I, protein kin 25.7 76 0.0026 22.5 4.0 28 325-352 30-57 (60)
6 2dl5_A KIAA0769 protein; SH3 d 25.0 80 0.0027 23.9 4.2 24 331-354 46-69 (78)
7 1u5s_A Cytoplasmic protein NCK 24.5 59 0.002 24.0 3.3 25 330-354 39-63 (71)
8 2k2m_A EPS8-like protein 1; al 24.4 64 0.0022 23.8 3.5 22 332-353 40-61 (68)
9 2jxb_A T-cell surface glycopro 24.4 75 0.0026 24.7 4.0 21 331-351 62-82 (86)
10 2vkn_A Protein SSU81; membrane 24.3 74 0.0025 23.5 3.8 24 331-354 38-61 (70)
11 2lx7_A GAS-7, growth arrest-sp 24.0 56 0.0019 24.2 3.0 22 330-351 35-56 (60)
12 1wxb_A Epidermal growth factor 22.9 84 0.0029 23.1 3.9 24 331-354 38-61 (68)
13 1uj0_A Signal transducing adap 22.3 88 0.003 22.5 3.8 21 330-351 36-56 (62)
14 2v1q_A SLA1, cytoskeleton asse 22.0 95 0.0032 21.9 3.9 27 325-351 29-56 (60)
15 2ege_A Uncharacterized protein 21.9 85 0.0029 23.6 3.8 30 324-354 40-69 (75)
16 1wxt_A Hypothetical protein FL 21.6 1E+02 0.0035 22.6 4.1 23 332-354 39-61 (68)
17 1gl5_A Tyrosine-protein kinase 21.2 1E+02 0.0034 22.5 4.0 24 330-353 33-56 (67)
18 1ug1_A KIAA1010 protein; struc 21.0 80 0.0027 26.0 3.6 29 323-353 44-74 (92)
19 2l76_A Nfatc2-interacting prot 20.9 25 0.00084 29.2 0.5 16 103-118 78-93 (95)
20 1jlp_A PSI-conotoxin PIIIF; mu 20.9 20 0.00069 22.4 -0.0 8 285-292 14-21 (26)
21 2iim_A Proto-oncogene tyrosine 20.5 88 0.003 22.4 3.5 21 332-352 38-59 (62)
22 2jw4_A Cytoplasmic protein NCK 20.4 90 0.0031 23.2 3.6 23 331-353 38-60 (72)
23 1cka_A C-CRK N-terminal SH3 do 20.2 1.1E+02 0.0038 21.4 3.9 21 331-351 33-53 (57)
24 1wx6_A Cytoplasmic protein NCK 20.0 98 0.0033 24.0 3.9 25 330-354 50-74 (91)
No 1
>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A
Probab=31.68 E-value=40 Score=24.15 Aligned_cols=23 Identities=17% Similarity=0.487 Sum_probs=16.4
Q ss_pred CCCeEEEeCCCeeeeeechhhhh
Q 012967 331 HGHWWLQFGSGLLVGYWPAFLFS 353 (452)
Q Consensus 331 tGnWWL~~g~~~~IGYWP~sLFt 353 (452)
..+||.--..+--.||.|++...
T Consensus 32 ~~~Ww~~~~~~g~~G~~P~~yv~ 54 (60)
T 1i07_A 32 RRQWWKVRNASGDSGFVPNNILD 54 (60)
T ss_dssp GCCEEEEECTTSCEEEEEGGGEE
T ss_pred CCCeEEEEECCCCEEEEEHHHeE
Confidence 78899874323468999997654
No 2
>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A
Probab=29.61 E-value=48 Score=24.44 Aligned_cols=21 Identities=24% Similarity=0.577 Sum_probs=15.4
Q ss_pred CCCCeEEE--eCCCeeeeeechhh
Q 012967 330 KHGHWWLQ--FGSGLLVGYWPAFL 351 (452)
Q Consensus 330 ~tGnWWL~--~g~~~~IGYWP~sL 351 (452)
...+||.- .. +--+||+|++.
T Consensus 42 ~~~~Ww~g~~~~-~g~~G~fP~~y 64 (70)
T 1gcq_C 42 AEHNWWEGRNTA-TNEVGWFPCNR 64 (70)
T ss_dssp TTCSEEEEEETT-TTEEEEEEGGG
T ss_pred CCCCCeEEEeCC-CCCEeEeehHH
Confidence 36899997 33 34689999865
No 3
>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1
Probab=26.44 E-value=52 Score=24.36 Aligned_cols=24 Identities=21% Similarity=0.223 Sum_probs=16.5
Q ss_pred CCCCeEEEeCCCeeeeeechhhhh
Q 012967 330 KHGHWWLQFGSGLLVGYWPAFLFS 353 (452)
Q Consensus 330 ~tGnWWL~~g~~~~IGYWP~sLFt 353 (452)
...+||.-...+--.||+|++...
T Consensus 43 ~~~~Ww~g~~~~g~~G~~P~~yv~ 66 (71)
T 1csk_A 43 KDPNWYKAKNKVGREGIIPANYVQ 66 (71)
T ss_dssp SSTTEEEEECTTSCEEEEETTSEE
T ss_pred CCCCCEEEEeCCCCEEEEehHHeE
Confidence 457899876223468999997543
No 4
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A
Probab=25.90 E-value=57 Score=23.29 Aligned_cols=22 Identities=18% Similarity=0.386 Sum_probs=15.0
Q ss_pred CCCCeEEEeCCCeeeeeechhhh
Q 012967 330 KHGHWWLQFGSGLLVGYWPAFLF 352 (452)
Q Consensus 330 ~tGnWWL~~g~~~~IGYWP~sLF 352 (452)
..+.||.--..+ -.||.|++..
T Consensus 37 ~~~~W~~~~~~g-~~G~~P~~yv 58 (63)
T 3eg3_A 37 HNGEWCEAQTKN-GQGWVPSAYI 58 (63)
T ss_dssp TTSSEEEEEETT-EEEEEEGGGE
T ss_pred CCCCeEEEEECC-CeEEEehHHe
Confidence 457788754433 4699999754
No 5
>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D
Probab=25.66 E-value=76 Score=22.46 Aligned_cols=28 Identities=14% Similarity=0.164 Sum_probs=17.0
Q ss_pred EecCCCCCCeEEEeCCCeeeeeechhhh
Q 012967 325 IWKDPKHGHWWLQFGSGLLVGYWPAFLF 352 (452)
Q Consensus 325 I~kDp~tGnWWL~~g~~~~IGYWP~sLF 352 (452)
|.+.....+||.--..+.-.||.|++..
T Consensus 30 v~~~~~~~~W~~g~~~~g~~G~~P~~yv 57 (60)
T 2x3w_D 30 KLGEEDEQGWCRGRLDSGQLGLYPANYV 57 (60)
T ss_dssp ECSCCCSSSEEEEECSSCCEEEEEGGGE
T ss_pred EEEccCCCCceEEEeCCCCEEEecHHHE
Confidence 4333233478876543357899999753
No 6
>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.97 E-value=80 Score=23.91 Aligned_cols=24 Identities=21% Similarity=0.241 Sum_probs=16.8
Q ss_pred CCCeEEEeCCCeeeeeechhhhhh
Q 012967 331 HGHWWLQFGSGLLVGYWPAFLFSH 354 (452)
Q Consensus 331 tGnWWL~~g~~~~IGYWP~sLFt~ 354 (452)
..+||.-...+-..||.|++...-
T Consensus 46 ~~~Ww~g~~~~g~~G~~P~~yv~~ 69 (78)
T 2dl5_A 46 MEDWVKARNKVGQVGYVPEKYLQF 69 (78)
T ss_dssp SSSEEEEECTTCCEEEEETTTSCC
T ss_pred CCCcEEEEeCCCCEEEEEhHHEEE
Confidence 478998654324689999976553
No 7
>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A
Probab=24.46 E-value=59 Score=24.00 Aligned_cols=25 Identities=20% Similarity=0.318 Sum_probs=17.3
Q ss_pred CCCCeEEEeCCCeeeeeechhhhhh
Q 012967 330 KHGHWWLQFGSGLLVGYWPAFLFSH 354 (452)
Q Consensus 330 ~tGnWWL~~g~~~~IGYWP~sLFt~ 354 (452)
...+||.-...+-..||.|++....
T Consensus 39 ~~~~Ww~g~~~~g~~G~~P~~yv~~ 63 (71)
T 1u5s_A 39 NDPEWWKCKNARGQVGLVPKNYVVV 63 (71)
T ss_dssp TTTCEEEEEETTTEEEEEETTSEEE
T ss_pred CCCCCEEEEeCCCCEEEEeHHHEEE
Confidence 5788998642134689999976543
No 8
>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A
Probab=24.41 E-value=64 Score=23.79 Aligned_cols=22 Identities=23% Similarity=0.527 Sum_probs=15.8
Q ss_pred CCeEEEeCCCeeeeeechhhhh
Q 012967 332 GHWWLQFGSGLLVGYWPAFLFS 353 (452)
Q Consensus 332 GnWWL~~g~~~~IGYWP~sLFt 353 (452)
++||.-...+-..||.|++...
T Consensus 40 ~~Ww~~~~~~g~~G~~P~~yv~ 61 (68)
T 2k2m_A 40 RKWWKVRDPAGQEGYVPYNILT 61 (68)
T ss_dssp SSEEEEECTTSCCEEEEGGGEE
T ss_pred CCeEEEEeCCCCEEEEEhhhEE
Confidence 7899874323468999997654
No 9
>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}
Probab=24.39 E-value=75 Score=24.66 Aligned_cols=21 Identities=24% Similarity=0.542 Sum_probs=14.9
Q ss_pred CCCeEEEeCCCeeeeeechhh
Q 012967 331 HGHWWLQFGSGLLVGYWPAFL 351 (452)
Q Consensus 331 tGnWWL~~g~~~~IGYWP~sL 351 (452)
+++||.--..+--+||+|++.
T Consensus 62 ~~~Ww~g~~~~g~~G~~P~~y 82 (86)
T 2jxb_A 62 SKTWWRVRNAANRTGYVPSNY 82 (86)
T ss_dssp CSSEEEEECTTSCEEEEEGGG
T ss_pred CCCeEEEEECCCCEEEeehHH
Confidence 578998752134689999864
No 10
>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}
Probab=24.35 E-value=74 Score=23.47 Aligned_cols=24 Identities=21% Similarity=0.444 Sum_probs=16.7
Q ss_pred CCCeEEEeCCCeeeeeechhhhhh
Q 012967 331 HGHWWLQFGSGLLVGYWPAFLFSH 354 (452)
Q Consensus 331 tGnWWL~~g~~~~IGYWP~sLFt~ 354 (452)
..+||.-...+--.||.|++...-
T Consensus 38 ~~~Ww~g~~~~g~~G~~P~~yv~~ 61 (70)
T 2vkn_A 38 EGRWWKARRANGETGIIPSNYVQL 61 (70)
T ss_dssp TSSEEEEECTTSCEEEEEGGGEEE
T ss_pred CCCeEEEEECCCCEEEEehHHEEE
Confidence 578998742234689999976543
No 11
>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}
Probab=24.04 E-value=56 Score=24.24 Aligned_cols=22 Identities=32% Similarity=0.667 Sum_probs=15.0
Q ss_pred CCCCeEEEeCCCeeeeeechhh
Q 012967 330 KHGHWWLQFGSGLLVGYWPAFL 351 (452)
Q Consensus 330 ~tGnWWL~~g~~~~IGYWP~sL 351 (452)
...+||.--..+--.||+|++-
T Consensus 35 ~~~~Ww~g~~~~G~~G~fP~ny 56 (60)
T 2lx7_A 35 PDGGWWEGEKEDGLRGWFPASY 56 (60)
T ss_dssp CTTSCEEEECTTSCEEEECGGG
T ss_pred cCCCeEEEEeCCCCEEEEcHHH
Confidence 4578998643223579999964
No 12
>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.89 E-value=84 Score=23.08 Aligned_cols=24 Identities=21% Similarity=0.520 Sum_probs=16.6
Q ss_pred CCCeEEEeCCCeeeeeechhhhhh
Q 012967 331 HGHWWLQFGSGLLVGYWPAFLFSH 354 (452)
Q Consensus 331 tGnWWL~~g~~~~IGYWP~sLFt~ 354 (452)
..+||.--..+-..||.|++...-
T Consensus 38 ~~~Ww~~~~~~g~~G~~P~~yv~~ 61 (68)
T 1wxb_A 38 GRQWWKLRSRSGQAGYVPCNILGE 61 (68)
T ss_dssp SSSEEEEECTTSCEEEEETTTCCB
T ss_pred CCCEEEEEECCCCEEEEEHHHeEE
Confidence 388998753234689999976543
No 13
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1
Probab=22.33 E-value=88 Score=22.46 Aligned_cols=21 Identities=19% Similarity=0.583 Sum_probs=15.1
Q ss_pred CCCCeEEEeCCCeeeeeechhh
Q 012967 330 KHGHWWLQFGSGLLVGYWPAFL 351 (452)
Q Consensus 330 ~tGnWWL~~g~~~~IGYWP~sL 351 (452)
...+||.--..+ -.||.|++.
T Consensus 36 ~~~~Ww~g~~~g-~~G~~P~~y 56 (62)
T 1uj0_A 36 SDANWWQGENHR-GTGLFPSNF 56 (62)
T ss_dssp CSSSEEEEEETT-EEEEEEGGG
T ss_pred CCCCEEEEEECC-CEEEechhH
Confidence 457899865434 489999865
No 14
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Probab=22.02 E-value=95 Score=21.87 Aligned_cols=27 Identities=30% Similarity=0.480 Sum_probs=17.1
Q ss_pred EecCCCCCCeEEEeC-CCeeeeeechhh
Q 012967 325 IWKDPKHGHWWLQFG-SGLLVGYWPAFL 351 (452)
Q Consensus 325 I~kDp~tGnWWL~~g-~~~~IGYWP~sL 351 (452)
|.++....+||.-.. .+--.||.|++.
T Consensus 29 v~~~~~~~~Ww~g~~~~~g~~G~~P~~y 56 (60)
T 2v1q_A 29 ILDDKKSKDWWMCQLVDSGKSGLVPAQF 56 (60)
T ss_dssp EEESSSCSSEEEEEETTTCCEEEEEGGG
T ss_pred EEeCCCCCCCEEEEECCCCCEEEEEHHH
Confidence 334334678998543 234679999865
No 15
>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.87 E-value=85 Score=23.62 Aligned_cols=30 Identities=23% Similarity=0.322 Sum_probs=19.9
Q ss_pred EEecCCCCCCeEEEeCCCeeeeeechhhhhh
Q 012967 324 MIWKDPKHGHWWLQFGSGLLVGYWPAFLFSH 354 (452)
Q Consensus 324 ~I~kDp~tGnWWL~~g~~~~IGYWP~sLFt~ 354 (452)
.|.++.....||.--- +-..||+|+.....
T Consensus 40 ~v~~~~~~~gWw~g~~-~g~~G~fP~~yv~~ 69 (75)
T 2ege_A 40 MVYGPMDDQGFYYGEL-GGHRGLVPAHLLDH 69 (75)
T ss_dssp EEESCCCTTCEEEEES-SSCEEEEETTTEEE
T ss_pred EEeEccCCCCEEEEEE-CCcEEEEChHHeEE
Confidence 4454335788998655 34689999976543
No 16
>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}
Probab=21.65 E-value=1e+02 Score=22.61 Aligned_cols=23 Identities=26% Similarity=0.619 Sum_probs=16.6
Q ss_pred CCeEEEeCCCeeeeeechhhhhh
Q 012967 332 GHWWLQFGSGLLVGYWPAFLFSH 354 (452)
Q Consensus 332 GnWWL~~g~~~~IGYWP~sLFt~ 354 (452)
.+||.-...+-..||.|+....-
T Consensus 39 ~~Ww~~~~~~g~~G~~P~~yv~~ 61 (68)
T 1wxt_A 39 KRWWLVKNEAGRSGYIPSNILEP 61 (68)
T ss_dssp SSEEEEECTTSCEEEEEGGGEEC
T ss_pred CCEEEEEECCCCEEEEEhHHcEE
Confidence 78998762245789999976543
No 17
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Probab=21.24 E-value=1e+02 Score=22.49 Aligned_cols=24 Identities=25% Similarity=0.462 Sum_probs=16.4
Q ss_pred CCCCeEEEeCCCeeeeeechhhhh
Q 012967 330 KHGHWWLQFGSGLLVGYWPAFLFS 353 (452)
Q Consensus 330 ~tGnWWL~~g~~~~IGYWP~sLFt 353 (452)
...+||.--..+--.||.|++...
T Consensus 33 ~~~~Ww~g~~~~g~~G~~P~~yv~ 56 (67)
T 1gl5_A 33 NDLHWWRARDKYGSEGYIPSNYVT 56 (67)
T ss_dssp SSSSEEEEECSSSCEEEEETTSEE
T ss_pred cCCCcEEEEECCCCEEEEEhHhEE
Confidence 457899865213468999997643
No 18
>1ug1_A KIAA1010 protein; structural genomics, SH3 domain, hypothetical protein BAA76854.1, riken structural genomics/proteomics initiative RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=21.03 E-value=80 Score=26.05 Aligned_cols=29 Identities=21% Similarity=0.511 Sum_probs=20.2
Q ss_pred EEEecCC--CCCCeEEEeCCCeeeeeechhhhh
Q 012967 323 LMIWKDP--KHGHWWLQFGSGLLVGYWPAFLFS 353 (452)
Q Consensus 323 i~I~kDp--~tGnWWL~~g~~~~IGYWP~sLFt 353 (452)
|.=-+|| .++.||+.. +..+||-|++...
T Consensus 44 Vl~k~Dp~Gn~srW~Vdt--gg~~GyvPs~yLe 74 (92)
T 1ug1_A 44 VIKKKDPMGSQNRWLIDN--GVTKGFVYSSFLK 74 (92)
T ss_dssp EEESCCTTSCSSEEEEEC--SSSEEEEEGGGEE
T ss_pred EEecCCCCCCCcceEEEC--CCcEEeeEhhhce
Confidence 4445677 556688665 4688999997654
No 19
>2l76_A Nfatc2-interacting protein; ubiquitin-like domain, structural genomics, PSI-biology, Pro structure initiative; NMR {Homo sapiens}
Probab=20.90 E-value=25 Score=29.23 Aligned_cols=16 Identities=38% Similarity=0.656 Sum_probs=12.5
Q ss_pred EEeCCCCCEEeeeecC
Q 012967 103 TIQSPDGDVIDCVLSH 118 (452)
Q Consensus 103 tI~s~dGdiiDCVdi~ 118 (452)
++..+|||+|||+-+.
T Consensus 78 ~L~meD~DiID~~~~~ 93 (95)
T 2l76_A 78 TLKLGVADIIDCVVLT 93 (95)
T ss_dssp HHTCCSSCEEEEEECC
T ss_pred HcCCCCCCEEEEEEec
Confidence 3457899999998653
No 20
>1jlp_A PSI-conotoxin PIIIF; multiple disulfide bonds, amidated C-terminus; HET: HYP; NMR {Synthetic} SCOP: j.30.1.4
Probab=20.87 E-value=20 Score=22.41 Aligned_cols=8 Identities=75% Similarity=1.834 Sum_probs=7.0
Q ss_pred cceecccc
Q 012967 285 TGCYNLLC 292 (452)
Q Consensus 285 TGCyNl~C 292 (452)
.||||.+|
T Consensus 14 pgcynalc 21 (26)
T 1jlp_A 14 PGCYNALC 21 (26)
T ss_dssp TTTTTSST
T ss_pred Cchhhhhh
Confidence 49999988
No 21
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A
Probab=20.48 E-value=88 Score=22.38 Aligned_cols=21 Identities=24% Similarity=0.597 Sum_probs=14.6
Q ss_pred CCeEEEeC-CCeeeeeechhhh
Q 012967 332 GHWWLQFG-SGLLVGYWPAFLF 352 (452)
Q Consensus 332 GnWWL~~g-~~~~IGYWP~sLF 352 (452)
++||.-.. .+--.||.|++..
T Consensus 38 ~~Ww~g~~~~~g~~G~~P~~yv 59 (62)
T 2iim_A 38 GEWWKAQSLTTGQEGFIPFNFV 59 (62)
T ss_dssp SSEEEEEETTTCCEEEEEGGGE
T ss_pred CCEEEEEECCCCCEEEEEHHHE
Confidence 58998752 1346899998753
No 22
>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}
Probab=20.42 E-value=90 Score=23.22 Aligned_cols=23 Identities=22% Similarity=0.421 Sum_probs=15.9
Q ss_pred CCCeEEEeCCCeeeeeechhhhh
Q 012967 331 HGHWWLQFGSGLLVGYWPAFLFS 353 (452)
Q Consensus 331 tGnWWL~~g~~~~IGYWP~sLFt 353 (452)
..+||.--..+-..||.|+....
T Consensus 38 ~~~Ww~g~~~~g~~G~~P~~yv~ 60 (72)
T 2jw4_A 38 SKSWWRVRNSMNKTGFVPSNYVE 60 (72)
T ss_dssp SSSSEEEECTTSCEEEECTTSCE
T ss_pred CCCEEEEEECCCCEEEEEhhHEE
Confidence 46899865313468999997654
No 23
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A
Probab=20.16 E-value=1.1e+02 Score=21.36 Aligned_cols=21 Identities=24% Similarity=0.376 Sum_probs=15.1
Q ss_pred CCCeEEEeCCCeeeeeechhh
Q 012967 331 HGHWWLQFGSGLLVGYWPAFL 351 (452)
Q Consensus 331 tGnWWL~~g~~~~IGYWP~sL 351 (452)
..+||.-...+...||.|++.
T Consensus 33 ~~~Ww~g~~~~g~~G~~P~~y 53 (57)
T 1cka_A 33 EEQWWNAEDSEGKRGMIPVPY 53 (57)
T ss_dssp SSSEEEEECTTSCEEEEEGGG
T ss_pred CCCcEEEEeCCCCEEEEeHHH
Confidence 478998752234689999875
No 24
>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=20.02 E-value=98 Score=24.04 Aligned_cols=25 Identities=20% Similarity=0.318 Sum_probs=17.7
Q ss_pred CCCCeEEEeCCCeeeeeechhhhhh
Q 012967 330 KHGHWWLQFGSGLLVGYWPAFLFSH 354 (452)
Q Consensus 330 ~tGnWWL~~g~~~~IGYWP~sLFt~ 354 (452)
...+||.--..+-..||+|+....-
T Consensus 50 ~~~~Ww~g~~~~g~~G~~P~~yv~~ 74 (91)
T 1wx6_A 50 NDPEWWKCKNARGQVGLVPKNYVVV 74 (91)
T ss_dssp SCTTEEEEECTTCCEEEEEGGGEEE
T ss_pred CCCCcEEEEeCCCCEEEEchHHEEE
Confidence 5788998752234689999977553
Done!