BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012968
(452 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O14197|YDQ4_SCHPO Uncharacterized transporter C5D6.04 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC5D6.04 PE=3 SV=1
Length = 452
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 198/451 (43%), Gaps = 70/451 (15%)
Query: 19 NVLSAILPL----LKLLSLTVIGLILAHPRQQMIPRATFRLLSKLVFALFLPCLIFTELG 74
NV S + P+ L+++ + + G +LA ++ +PR +++S L F PCL+F ++G
Sbjct: 11 NVWSLLRPIIESDLEVIVIALGGYVLA--KKGFLPRDAQKVISSLNVYFFTPCLVFEKVG 68
Query: 75 ESVNWHNISHWWFIPVNVLVSTVIGFFLGCLVVIICRPPPELNRFAIVMTAFGNSGNLSL 134
+N + +PV ++ + + L+ + R P FA F NS +L L
Sbjct: 69 NGLNLKMLIDLSLLPVFYVIISAASILISFLLAKLFRLTPRQRNFATACITFQNSNSLPL 128
Query: 135 AIVSSVCHS----------NNSPFGAHCHSRGVAYVSFAQWVSVILVYTLVYHMMEPPLE 184
A+VSS+ + +++P SRG+ Y+ + L ++ Y ++ P +
Sbjct: 129 ALVSSLATTVKDLLWDKIPDDTP--DKVASRGIMYLLIFSQLGQALRWSYGYRILLSPNQ 186
Query: 185 YYEVVEEG-------EIMEEELAVNNDVSRPLLVEAEWPGIEDKETEHSKTPFIARIFNG 237
+ + G ++ EEE + N ++ V+ ++ E +T A N
Sbjct: 187 PEDPLPIGNRSWSHSDVNEEE--IQNLLASSANVDGVQNSVQANEGSTVQTDSSAISKND 244
Query: 238 ITSLSQTNFPELDLSADGASNSPRALRCLAEPRVVRRIRIVAEQTPIQHILQPPTIASLL 297
+ +N ++ GA++S ++ + I ++ + PP + +
Sbjct: 245 NVQVETSN---EEVGGFGAASS----------KISKFIVLLLD------FFSPPLYSLFI 285
Query: 298 AIIIGTVPQLKAFFF--GSDAPLSFITDSLEILGGAMVPSVMLVLGGMLAEG-------- 347
A+ I VP L+ FFF GS S IT + + G VP +++VLG LA
Sbjct: 286 ALFIAVVPPLQRFFFEEGSFVEGS-ITSGIRMAGQVAVPMILVVLGASLATDISKTEPTQ 344
Query: 348 ---PNDSTLGCRTTIGIIVARLVVLPLIGIGIVALADKLHFLVE----GDSMFIFVLLLQ 400
N+ T R I ++ R+VV+PL + +L L + E D +F+ V+ L
Sbjct: 345 EVRKNNDT---RVIIVCLLGRMVVVPLALLPAFSL---LSYFSEISTVDDPVFVVVIFLL 398
Query: 401 YSTPSAILLGAIASLRGYAVKEASALLFWQH 431
+P+AI L I L G +E + +L+W +
Sbjct: 399 VGSPTAIQLTQICQLNGVFERECAKVLWWSY 429
>sp|P38355|YB8B_YEAST Uncharacterized transporter YBR287W OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YBR287W PE=1 SV=1
Length = 427
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 73/143 (51%), Gaps = 12/143 (8%)
Query: 47 MIPRATFRLLSKLVFALFLPCLIFTELGESVNWHNISHWWFIPVNVLVSTVIGFFLGCLV 106
++P+ + +++S L LF PCLIF++L +S++ I IP+ ++T I F G ++
Sbjct: 36 LLPKQSQKIISLLNVDLFTPCLIFSKLAKSLSMAKIFEIAIIPIFFGLTTGISFISGKIM 95
Query: 107 VIICRPPPELNRFAIVMTAFGNSGNLSLAIVSSVCHS----------NNSPFGAHCHSRG 156
I + F + + FGNS +L +++ S+ ++ N++ + SRG
Sbjct: 96 SRILDLDKDETNFVVANSVFGNSNSLPVSLTLSLAYTLPNLTWDQIPNDN--RDNVASRG 153
Query: 157 VAYVSFAQWVSVILVYTLVYHMM 179
+ Y+ Q + +L ++ Y+ +
Sbjct: 154 ILYLLIFQQIGQMLRWSWGYNKL 176
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 83/166 (50%), Gaps = 7/166 (4%)
Query: 284 IQHILQPPTIASLLAIIIGTVPQLKAFFFGSDAPLS-FITDSLEILGGAMVPSVMLVLGG 342
I+ L PP + + A+++ + L+ F D ++ +++ LG +P +++VLG
Sbjct: 250 IRANLNPPLYSMIFAVVVAAIGPLQRELFMEDGFINNTFAEAVTQLGSVSIPLILVVLGS 309
Query: 343 ML---AEGPNDSTLGCRTTIGIIVARLVVLPLIGIGIVALADK-LHFLVEGDSMFIFVLL 398
L AE + + IG I+ R+++ + I+A+A K ++ + D +F+ V
Sbjct: 310 NLYPSAEVFPKTVHHSKLLIGSIIGRMILPSCFLLPIIAIAVKYINVSILDDPIFLVVGF 369
Query: 399 LQYSTPSAILLGAIASLRGYAVKEASALLFWQHIFALFSLSLYIVV 444
L +P AI L I L + E + +LFW +A+ SL + I+V
Sbjct: 370 LLTVSPPAIQLTQITQLNEFFEAEMADILFWG--YAVLSLPVSIIV 413
>sp|P54072|YL152_YEAST Uncharacterized transporter YLR152C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YLR152C PE=1 SV=1
Length = 576
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 99/220 (45%), Gaps = 22/220 (10%)
Query: 23 AILPLLKLLSLTVIGLILAHPRQQMIPRATFRLLSKLVFALFLPCLIFTELGESVNWHNI 82
A+ P+ K+ ++ ++G ++A + ++ + +S +V LPCL F ++ +++W +I
Sbjct: 12 ALKPIFKIYTIMLVGYLVA--KFDIVSMENAKGISNMVVNAILPCLTFNKIVSNISWRDI 69
Query: 83 SHWWFIPVNVLVSTVIGFFLGCLVVIICRPPPELNRFAIVMTA-FGNSGNLSLAIVSSVC 141
I ++ + V+G G L P+ + ++ F N +L +A + S+
Sbjct: 70 KEIGVIILSAFILFVLG-ATGALFTTFATTVPKKFFWGLIFAGFFPNISDLPIAYIQSM- 127
Query: 142 HSNNSPFGAHCHSRGVAYVSFAQWVSVILVYTLVYHMMEPPLEYYEVVEEGEIMEEELAV 201
N S F A +GVAY S I ++ + MM + VV G +
Sbjct: 128 -GNGSIFTAEEADKGVAY-------SCIFLFIQSFLMMN--FGMWRVV--GLDFRDTKEP 175
Query: 202 NNDVSRPLLVEAEWPGIEDKE-TEHSKTPFIARIFNGITS 240
+++ P + P I+D++ TE +K P I R N S
Sbjct: 176 DSENITPSVS----PAIDDRKLTEITKLPNITRPTNAYQS 211
Score = 37.0 bits (84), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 40/232 (17%)
Query: 187 EVVEEGEIMEEELAVNNDVSRPLLVEAEWPGIEDKETEHSKTPFIARIFNGITSLSQTNF 246
E + +GE+ D+SRPL + E S+ I + G T S
Sbjct: 321 EKIRQGEL---------DLSRPLSLTEE---------VGSRNASIGNVHTGYTDESSI-- 360
Query: 247 PELDLSADGASNSPRALRCLAEPRVVRRIRIVAEQTPIQHILQPPTIASLLAIIIGTVPQ 306
E + + A++ +L E ++ + Q I + L+P ++ ++L II +P
Sbjct: 361 -EEENCTNMATDGRGSLSFFIERHNLKWL-----QYFIINCLRPASLGAILGIICALIPW 414
Query: 307 LKAFFFGS-----DAP-----LSFITDSLEILGGAMVPSVMLVLGGMLAEGPNDSTLG-- 354
+KA F + AP L+F+ D E +G A VP +L+LGG LA S
Sbjct: 415 VKACFVTTYVHVHKAPDGEPVLNFLMDFTEYIGNACVPLGLLLLGGTLARLEIKSLPPGF 474
Query: 355 CRTTIGIIVARLVVLPLIGIGIVALADKLHFLVEGDSMFIFVLLLQYSTPSA 406
++ + + RL+V+P+IG+ V + +L G + F ++L +S PSA
Sbjct: 475 IKSALLMTCFRLIVIPIIGVLWVNKLYSIDWLDTG--IGKFDMILTWSMPSA 524
>sp|Q99252|ECM3_YEAST Protein ECM3 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=ECM3 PE=1 SV=1
Length = 613
Score = 40.8 bits (94), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 23/145 (15%)
Query: 284 IQHILQPPTIASLLAIIIGTVPQLKAFFFGS-----------DAP-LSFITDSLEILGGA 331
+++ L+P ++A +LA+II +P +KA F + +AP L+FI D +G A
Sbjct: 423 LKNCLRPCSMAVILALIIAFIPWVKALFVTTSNTPKIKQAPDNAPALTFIMDFTSYVGAA 482
Query: 332 MVPSVMLVLGGMLAEGPNDSTLG------CRTTIGIIVARLVVLPLIGIGIVALADKLHF 385
VP +++LG L +G ++ + ++ R ++P+ G+ K +
Sbjct: 483 SVPFGLILLGATLGR----LKIGKLYPGFWKSAVVLVFLRQCIMPIFGVLWCDRLVKAGW 538
Query: 386 LV-EGDSMFIFVLLLQYSTPSAILL 409
L E D M +FV + ++ P+ L
Sbjct: 539 LNWENDKMLLFVTAITWNLPTMTTL 563
Score = 33.5 bits (75), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 88/194 (45%), Gaps = 16/194 (8%)
Query: 18 QNVLSAILPLLKLLSLTVIGLILAHPRQQMIPRATFRLLSKLVFALFLPCLIFTELGESV 77
Q + +++ P++K+ + +G L + ++ R +S +V + LPCL F ++ ++
Sbjct: 8 QAIWASVRPIIKIYLIIGVGFGLC--KMNILTVQATRSISDIVLTILLPCLSFNKIVANI 65
Query: 78 NWHNISHWWFIPVN--VLVSTVIGFFLGCLVVIICRPPPELNRFAIVMTA-FGNSGNLSL 134
++I I + +L +T +GF +V P P+ R I+ F N +L +
Sbjct: 66 EDNDIKDVGIICLTSVILFATGLGF---AFIVRSVLPVPKRWRGGILAGGMFPNISDLPI 122
Query: 135 AIVSSVCHSNNSPFGAHCHSRGVAYVSFAQWVSVILVYTL-VYHMMEPPLEYYEVVEEGE 193
A + S+ F +GVA V + +I V+ L + ++E Y +G+
Sbjct: 123 AYLQSM--DQGFIFTEAEGEKGVANVIIFLAMFLICVFNLGGFRLIENDFHY-----KGD 175
Query: 194 IMEEELAVNNDVSR 207
EE N+D ++
Sbjct: 176 DDEENTLTNDDSAQ 189
>sp|P53932|YNJ5_YEAST Uncharacterized transporter YNL095C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YNL095C PE=1 SV=1
Length = 642
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 66/141 (46%), Gaps = 15/141 (10%)
Query: 284 IQHILQPPTIASLLAIIIGTVPQLKAFFF------------GSDAPLSFITDSLEILGGA 331
+++ L+P ++A ++A+ + +P +KA F + PLSF D +G A
Sbjct: 452 LKNCLRPCSMAVIIALTVAFIPWVKALFVTTANTPHISQAPDNAPPLSFFMDFTGYVGAA 511
Query: 332 MVPSVMLVLGGMLAEGP--NDSTLGCRTTIGIIVARLVVLPLIGIGIVALADKLHFLV-E 388
VP +++LG L N + + +++ R V+P+ G+ K ++ +
Sbjct: 512 CVPFGLILLGATLGRLKIGNLYPGFWKAAVTLVILRQCVMPIFGVLWCDRLVKAGWVNWQ 571
Query: 389 GDSMFIFVLLLQYSTPSAILL 409
D M +FV+ + ++ P+ L
Sbjct: 572 DDRMLLFVIAISWNLPTMTTL 592
>sp|Q58437|Y1031_METJA Uncharacterized transporter MJ1031 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1031 PE=3 SV=1
Length = 308
Score = 35.4 bits (80), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 15/152 (9%)
Query: 290 PPTIASLLAIIIGTVPQLKAFFFGSDAPLSFITDSLEILGGAMVPSVMLVLGGMLAEGPN 349
PP I +L+II L F F + SFI SL L A VP +M+ LG L+ P
Sbjct: 166 PPLITGILSII------LVFFGFKLNYIPSFILKSLNYLSSATVPLIMMSLG--LSLSPK 217
Query: 350 DSTLGCRTTIGIIVARLVVLPLIGIGIVALADKLHFLVEGDSMFIFVLLLQYSTPSAILL 409
G I + R +V P A A L L+ + VLL++ S PSA++
Sbjct: 218 ALKFGVFWGIIASIFRFIVSP-------ATAFTLSELINIKGLEKNVLLVESSMPSAMMT 270
Query: 410 GAIASLRGYAVKEASALLFWQHIFALFSLSLY 441
+ +L +K ++ +F F+L ++L+
Sbjct: 271 LVLGTLYELDIKLIASSIFITTTFSLLVIALW 302
>sp|Q86W28|NALP8_HUMAN NACHT, LRR and PYD domains-containing protein 8 OS=Homo sapiens
GN=NLRP8 PE=2 SV=2
Length = 1048
Score = 33.9 bits (76), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 22/186 (11%)
Query: 197 EELAVNNDVSRPLLVEAEWPGIEDKETE-HSKTPFIARIFNGITSLSQTNFPEL-DLSAD 254
+E+ D S L+E +WPG +D ++ SK + + +G L+ T L DLS D
Sbjct: 246 QEVNQTTDQSFSELIEQKWPGSQDLVSKIMSKPDQLLLLLDGFEELTSTLIDRLEDLSED 305
Query: 255 GASNSP--------RALRCLAEPRVVRRIRIVAEQTPIQHILQPPTIASLLAIIIGTVPQ 306
P + L E ++ IR + QT + +L+ P++ +L T+ +
Sbjct: 306 WRQKLPGSVLLSSLLSKTMLPEATLLIMIRFTSWQT-CKPLLKCPSLVTLPG--FNTMEK 362
Query: 307 LKAF--FFG----SDAPLSFITDSLEILGGAMVPSVM-LVLGGMLA--EGPNDSTLGCRT 357
+K F +FG D LSF ++ + VP V +V G+ E N+ T C
Sbjct: 363 IKYFQMYFGHTEEGDQVLSFAMENTILFSMCRVPVVCWMVCSGLKQQMERGNNLTQSCPN 422
Query: 358 TIGIIV 363
+ V
Sbjct: 423 ATSVFV 428
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.141 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 158,298,782
Number of Sequences: 539616
Number of extensions: 6472490
Number of successful extensions: 19856
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 19843
Number of HSP's gapped (non-prelim): 23
length of query: 452
length of database: 191,569,459
effective HSP length: 121
effective length of query: 331
effective length of database: 126,275,923
effective search space: 41797330513
effective search space used: 41797330513
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)