BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012971
(452 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P18549|CEFD_STRC2 Isopenicillin N epimerase OS=Streptomyces clavuligerus (strain ATCC
27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 /
NRRL 3585 / VKM Ac-602) GN=cefD PE=1 SV=3
Length = 398
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 161/421 (38%), Gaps = 59/421 (14%)
Query: 40 VARINNGSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVG 99
V +N GS G P+S ++ +P DF + + ++R ++ LI D +
Sbjct: 19 VVNLNTGSGGPLPRSAFERVTGFRAHLAAEPMDFLLREVPALLWQARESLARLIGGDPL- 77
Query: 100 EISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVV 159
++L N T A +V + R +L+ + ++ + R G +
Sbjct: 78 RLALATNVTAAVNLVASSL-------RLEAPGEILLSDDEYTPMRWCWERVARRHGLELR 130
Query: 160 EVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDE 219
+LP + EI + G RL H+ S +++P +L + R
Sbjct: 131 TFRLPELPSDPAEITAAAVAAM------GPRTRLFFFSHVVSTTGLILPAAELCEEARAR 184
Query: 220 GVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMHHPV 279
G+ V VD AHA G + +D+ I DFY + HKW P V FL+ L ++
Sbjct: 185 GITTV-VDGAHAPGFLDLDLSRIPCDFYAGSGHKWLLAPTGVGFLHLAPGRL-EELEPTQ 242
Query: 280 VSHEF----GNGLPIESAWI------------GTRDYSAQLVIPSAVTFVSRFEGGIDGI 323
VS + G+G P GTRD L P ++ F + E G I
Sbjct: 243 VSWAYEPPEGSGPPAARDRFGSTPGLRRLECEGTRDICPWLATPESIDFQA--ELGPGAI 300
Query: 324 MQRNHEQALKMARMLANAWGTSLGSP--PEICAAMVMVGLPSRLRVMGEDDALRLRGHLR 381
R E R+LA+ G +L +P PE+ MV LP DA LR L
Sbjct: 301 RARRRELTDHARRLLADRPGRTLLTPDSPELSGGMVAYRLPP------GTDAAELRRGLW 354
Query: 382 VRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441
RF +E + Q P RIS Y T E+ ++ DA+ L
Sbjct: 355 ERFRIEAAVAEQPPGP-----------------VLRISANFYTTEEEIDRLADALDALTG 397
Query: 442 E 442
E
Sbjct: 398 E 398
>sp|O94431|YHKC_SCHPO Uncharacterized aminotransferase C660.12c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC660.12c PE=3 SV=1
Length = 392
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 144/343 (41%), Gaps = 49/343 (14%)
Query: 42 RINNGSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILE-SRAAVKDLINADDVGE 100
+NNGS G+ +V ++ LK Q DF N+ +E +R V LI AD
Sbjct: 23 NVNNGSCGTESLAVY-NKHVQLLKEAQSKPDFMCNAYMPMYMEATRNEVAKLIGADS-SN 80
Query: 101 ISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVE 160
I ++AT + VL + +ND +LML+ A+ Y +
Sbjct: 81 IVFCNSATDGISTVLLTFP-------WEQNDEILMLNVAYPTC-----TYAADFAKNQHN 128
Query: 161 VQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEG 220
++L E + F K +E+ K R I D ++SMP ++ P K+VK+C+
Sbjct: 129 LRLDVIDVGVEIDEDLFLKEVEQRFLQSKP-RAFICDILSSMPVILFPWEKVVKLCKKYN 187
Query: 221 VDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMHHPVV 280
+ + +D AHA+G I +++ + DF +N HKW P + LY
Sbjct: 188 IVSI-IDGAHAIGHIPMNLANVDPDFLFTNAHKWLNSPAACTVLYVSAK----------- 235
Query: 281 SHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFE-------------------GGID 321
+H LP+ + G R+ + V FV+ F+ GG +
Sbjct: 236 NHNLIEALPLSYGY-GLREKESIAVDTLTNRFVNSFKQDLPKFIAVGEAIKFRKSIGGEE 294
Query: 322 GIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSR 364
I Q HE ALK A +++ GTS PP AMV V +P R
Sbjct: 295 KIQQYCHEIALKGAEIISKELGTSFIKPP-YPVAMVNVEVPLR 336
>sp|Q03046|CEFD_NOCLA Isopenicillin N epimerase OS=Nocardia lactamdurans GN=cefD PE=3
SV=1
Length = 398
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 159/415 (38%), Gaps = 58/415 (13%)
Query: 40 VARINNGSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVG 99
V +N GS G P+ V D+ + + P DF L + +R + + A
Sbjct: 19 VTNLNAGSCGPLPRPVF-DRVTVRARMAAGPMDFLSRQLPPLLWTARERLAGYLGARPE- 76
Query: 100 EISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVV 159
++ N T A +V + G +L+ + ++ + G V
Sbjct: 77 RLAFATNVTGAVNLVASSVQPHLAAG-----GEILLSDQEYAPMRWCWERVARHQGLVVR 131
Query: 160 EVQLPF-PLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRD 218
+LP PL S +E++ + G RL H+ S +V+P +L + R
Sbjct: 132 TFRLPVQPLGSPDEVVEAATAAM------GPRTRLLFFSHVVSSTGLVLPATRLCEEARR 185
Query: 219 EGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMHHP 278
GV V VD A A G +D+ + D+Y + HKW P V FL+ + + P
Sbjct: 186 RGVLTV-VDGAQAPGFTDLDLAALPCDYYAGSGHKWLLAPTGVGFLHFAED-QGGVLRPP 243
Query: 279 VVS--------------HEFGNGLPIESAWI-GTRDYSAQLVIPSAVTFVSRFEGGIDGI 323
VS + FG+ + + GTRD L +PSA+ F + G +
Sbjct: 244 QVSWGYRPDGENPSDERNRFGSTDRLRNLECEGTRDLCPWLAVPSAIDFQAGL--GHGRV 301
Query: 324 MQRNHEQALKMARMLANAWGTSLGSP--PEICAAMVMVGLPSRLRVMGEDDALRLRGHLR 381
+R E A L+ G +P P + AM LP G D A LR L
Sbjct: 302 RERMRELAAFTRERLSGWRGLEPVTPAHPGLSGAMTAFRLPP-----GTDTA-GLRHGLW 355
Query: 382 VRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAV 436
RF ++VP+ + DG + R+S YNT + E+ +A+
Sbjct: 356 DRFRIDVPVLDR--------------PDGPLL---RVSTHFYNTETEVERLAEAL 393
>sp|O32164|CSD_BACSU Probable cysteine desulfurase OS=Bacillus subtilis (strain 168)
GN=csd PE=3 SV=1
Length = 406
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 184/443 (41%), Gaps = 84/443 (18%)
Query: 27 AEIRDEFS--HHQ---HGVARINNGSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKG 81
+IR++F H Q H + +++ + P++V+ K+ + Y +++ +G
Sbjct: 4 TDIREQFPILHQQVNGHDLVYLDSAATSQKPRAVIETLDKYY--------NQYNSNVHRG 55
Query: 82 I--LESRAA---------VKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRN 130
+ L +RA V+ INA + EI TT+ L + +
Sbjct: 56 VHTLGTRATDGYEGAREKVRKFINAKSMAEIIFTKGTTTS----LNMVALSYARANLKPG 111
Query: 131 DTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGK 189
D V++ + A Q V G ++ + PL + I + + ++ + K
Sbjct: 112 DEVVITYMEHHANIIPWQQAVKATGATLKYI----PLQEDGTISLEDVRETVTSNTK--- 164
Query: 190 MIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVS 249
+ + H++++ V P++++ KI D G + VD A + +KIDV+++ DF+
Sbjct: 165 ---IVAVSHVSNVLGTVNPIKEMAKIAHDNGA-VIVVDGAQSTPHMKIDVQDLDCDFFAL 220
Query: 250 NLHKWFFCPPS-VAFLYCRKSILSSDMHHPVVSHEFGN------GLPIESAW-------- 294
+ HK C P+ V LY +K++L + + EFG GL ES W
Sbjct: 221 SSHK--MCGPTGVGVLYGKKALLEN-----MEPAEFGGEMIDFVGL-YESTWKELPWKFE 272
Query: 295 IGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICA 354
GT + + + +A+ F+ E G+D I + H+ A G ++ P E A
Sbjct: 273 AGTPIIAGAIGLGAAIDFLE--EIGLDEISRHEHKLAAYALERFRQLDGVTVYGPEE-RA 329
Query: 355 AMVMVGLPSRLRVMGEDDALRLRGH-LRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIIT 413
+V L V D A L + VR G H+ A QP D +T
Sbjct: 330 GLVTFNLDD---VHPHDVATVLDAEGIAVRAG-----HHCA-----QPLMKWLD----VT 372
Query: 414 GYARISHQVYNTLEDYEKFRDAV 436
AR S +YNT E+ +K +A+
Sbjct: 373 ATARASFYLYNTEEEIDKLVEAL 395
>sp|Q93WX6|NFS2_ARATH Cysteine desulfurase 2, chloroplastic OS=Arabidopsis thaliana
GN=NFS2 PE=1 SV=1
Length = 463
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 47/274 (17%)
Query: 64 LKFLQQPDDFYFNSLRKGI--LESRAA---------VKDLINADDVGEISLVDNATTAAA 112
L LQ +FY +++ +GI L ++A V INA D EI NAT A
Sbjct: 89 LDALQNYYEFYNSNVHRGIHYLSAKATDEFELARKKVARFINASDSREIVFTRNATEAIN 148
Query: 113 IVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEE 172
+V G D V++ + Q V++ G+V L F +E+E
Sbjct: 149 LVAYSWGLS----NLKPGDEVILTVAEHHSCIVPWQI-VSQKTGAV----LKFVTLNEDE 199
Query: 173 I--INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAH 230
+ IN+ ++ I K L + H++++ +P+ ++V D G +V VDA
Sbjct: 200 VPDINKLRELISPKTK------LVAVHHVSNVLASSLPIEEIVVWAHDVGA-KVLVDACQ 252
Query: 231 AMGSIKIDVKEIGADFYVSNLHKWFFCPPS-VAFLYCRKSILSSDMHHPVVSHEFGNGLP 289
++ + +DV+++ ADF V++ HK C P+ + FLY + +L S + G G
Sbjct: 253 SVPHMVVDVQKLNADFLVASSHK--MCGPTGIGFLYGKSDLLHS------MPPFLGGGEM 304
Query: 290 IESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGI 323
I ++ D+S P SRFE G I
Sbjct: 305 ISDVFL---DHSTYAEPP------SRFEAGTPAI 329
>sp|Q7N3U5|SUFS_PHOLL Cysteine desulfurase OS=Photorhabdus luminescens subsp. laumondii
(strain TT01) GN=sufS PE=3 SV=1
Length = 412
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 117/271 (43%), Gaps = 39/271 (14%)
Query: 86 RAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKK 145
R + I+A EI V T ++ GR F + D +++ A
Sbjct: 73 RYQIAQFIHAQSHEEIVFVKGTTEGINLIANSYGRKF----INNGDNIVITEMEHHA--- 125
Query: 146 SIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCV 205
+I + A E+++ +PL E + I D + +L H++++
Sbjct: 126 NIVPWYMLAEQIGFEIRV-WPLNEN----GELDQAILASLIDSRT-KLLSFTHLSNVLGT 179
Query: 206 VIPVRKLVKICR-----DEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPS 260
V PVR+++K R EG + VD A A+ +IDV+++ DFYV + HK + P
Sbjct: 180 VNPVRQIIKQARKLADEQEGRLHILVDGAQAIMHKQIDVQDLDCDFYVFSSHK-LYGPTG 238
Query: 261 VAFLYCRKSILSSDMHHP-------VVSHEFGNGLPI-ESAW---IGTRDYSAQLVIPSA 309
+ LY RKS+L D P + G+ E W GT + + + + +A
Sbjct: 239 IGVLYGRKSLL--DAMPPWEGGGAMIKQVSLQKGITYAEPPWRFEAGTPNITGIIGLGAA 296
Query: 310 VTFVSRFEGGIDGIMQRNHEQAL---KMARM 337
V +V+ G+D I Q HEQAL MAR+
Sbjct: 297 VDYVTSL--GLDEIQQ--HEQALMDYAMARL 323
>sp|O27442|CSD_METTH Probable cysteine desulfurase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=csd PE=3 SV=1
Length = 400
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 192 RLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNL 251
RL + HI++ V V+++ +I D G VDAA ++G +++DV+ IGADF
Sbjct: 156 RLVTVTHISNALGTVQDVKEIGRIAHDVGA-LYLVDAAQSIGHMEVDVRAIGADFAAFPG 214
Query: 252 HKWFFCPPSVAFLYCRKSI 270
HK P FLYC +
Sbjct: 215 HKGTLGPVGTGFLYCSTDV 233
>sp|A7FHJ2|SUFS_YERP3 Cysteine desulfurase OS=Yersinia pseudotuberculosis serotype O:1b
(strain IP 31758) GN=sufS PE=3 SV=1
Length = 406
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 17/187 (9%)
Query: 86 RAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKK 145
R V D I+A EI V T A +V GR F D++++ A
Sbjct: 73 RTQVADFIHAASAEEIIFVRGTTEAINLVANSYGRHF----LVTGDSIIITEMEHHANIV 128
Query: 146 SIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPC 204
Q G VE+++ +PL + E+ I + I+ RL + I+++
Sbjct: 129 PWQMLAQDLG---VEIRV-WPLTATGELEITDLAALIDD------TTRLLAVTQISNVLG 178
Query: 205 VVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFL 264
V P++ +V + G+ V VD A A+ +DV+ +G DFYV + HK + P + L
Sbjct: 179 TVNPIKDIVAQAKAAGL-VVLVDGAQAVMHQPVDVQALGCDFYVFSGHK-LYGPSGIGIL 236
Query: 265 YCRKSIL 271
Y + ++L
Sbjct: 237 YGKSALL 243
>sp|Q9V242|CSD_PYRAB Probable cysteine desulfurase OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=csd PE=3 SV=1
Length = 401
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 17/188 (9%)
Query: 84 ESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAV 143
ESR V D INA+ EI+ N T+ ++ L +G E F + D ++ +
Sbjct: 64 ESRKVVADFINAE-FDEIAFTKN--TSESLNLVALG---LEHLFKKGDKIVTTPYEHHSN 117
Query: 144 KKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMP 203
Q + G ++L F +E ++ + +K K +L + H+++
Sbjct: 118 LLPWQRLAKKKG-----LKLEFIEGDDEGNLD-----LADAEKKIKGAKLVAVQHVSNAL 167
Query: 204 CVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAF 263
V+ V +L K+ ++EG V VDAA ++G +++DVK++ ADF + HK P +
Sbjct: 168 GVIHEVEELGKMVKEEGAIFV-VDAAQSVGHMEVDVKKLKADFLAFSGHKGPMGPTGIGV 226
Query: 264 LYCRKSIL 271
LY K
Sbjct: 227 LYINKEFF 234
>sp|Q9KII6|CSD_MYCPA Probable cysteine desulfurase OS=Mycobacterium paratuberculosis
(strain ATCC BAA-968 / K-10) GN=MAP_2120c PE=3 SV=1
Length = 685
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 17/190 (8%)
Query: 84 ESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAV 143
E+R V + I A I V T A +V G D +++ H A
Sbjct: 347 EARDTVAEFIGAPSSDNIVFVRGTTEAINLVAHAWG----AKHLQPGDEIVITHLEHHAN 402
Query: 144 KKSIQAYVTRAGGSVVEVQLPFPLASEEEII-NEFKKGIEKGKKDGKMIRLAIIDHITSM 202
Q +++ G++++V P+ ++ +EF+ + G +L H+++
Sbjct: 403 IVPWQ-LISQKTGAILKVA---PIDDAGNLLLSEFEGLL------GPRTKLVAASHVSNA 452
Query: 203 PCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVA 262
V+PV K+V++ G +V +D A ++ I IDV E+GADF+V + HK + P +
Sbjct: 453 LGTVMPVDKIVELGHRYGA-RVLIDGAQSIQHIPIDVAELGADFFVFSGHK-IYGPTGIG 510
Query: 263 FLYCRKSILS 272
LY + L+
Sbjct: 511 ALYGTEEALT 520
>sp|Q9K7A0|CSD_BACHD Probable cysteine desulfurase OS=Bacillus halodurans (strain ATCC
BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=csd PE=3 SV=2
Length = 406
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 150/370 (40%), Gaps = 78/370 (21%)
Query: 85 SRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVL---MLHCA-- 139
+R ++ I+A EI TTA +V GR D ++ M H +
Sbjct: 70 AREKIRRFIHASSTEEIIFTRGTTTAINLVAASYGRA----NLGEGDEIVITPMEHHSNI 125
Query: 140 --FQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAII 196
+Q V K+ A +T PL + I I + +K I + K + I
Sbjct: 126 IPWQQVAKATGATLTY-----------LPLQKDGTIKIEDVEKTISEKTK------IVAI 168
Query: 197 DHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFF 256
H++++ + PV+++ +I G + VD A + +KIDV+E+G DF+ + HK
Sbjct: 169 MHVSNVLGTINPVKEIAEIAHRHGA-IMLVDGAQSAPHMKIDVQELGCDFFAFSGHK-MA 226
Query: 257 CPPSVAFLYCRKSILSSDMHHPVVSHEFGN------GLPIESAWI--------GTRDYSA 302
P + LY +K+ L + PV EFG GL +S W GT +
Sbjct: 227 GPTGIGVLYGKKAHL--EKMEPV---EFGGEMIDFVGL-YDSTWKELPWKFEGGTPIIAG 280
Query: 303 QLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGL- 361
+ + +A+ F+ G+D I + HE A L+ G ++ P + A +V +
Sbjct: 281 AIGLGAAIDFLEDI--GLDEIEKHEHELAQYALDRLSELEGMTVYGPQK-RAGLVTFNIE 337
Query: 362 ---PSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARI 418
P + + + D + +R H+ A QP D +T AR
Sbjct: 338 DVHPHDVATVLDADGIAVRAG-----------HHCA-----QPLMKWLD----VTATARA 377
Query: 419 SHQVYNTLED 428
S +YNT ED
Sbjct: 378 SFYLYNTKED 387
>sp|P87185|NFS1_CANAL Cysteine desulfurase, mitochondrial OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=NFS1 PE=3 SV=1
Length = 488
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 92/192 (47%), Gaps = 23/192 (11%)
Query: 80 KGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCA 139
K + ++R + D+INAD EI AT + ++ + R + + + H T C
Sbjct: 131 KEVEKARTYIADVINADP-KEIIFTSGATETNNMAIKGVPRFYKKTKKHIITTQTEHKCV 189
Query: 140 FQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDH 198
+ + ++ G V + P++SE I +++ KK I +KD ++ + +++
Sbjct: 190 LDSAR-----HMQDEGFEVTYL----PVSSEGLINLDDLKKAI---RKDTVLVSIMAVNN 237
Query: 199 ITSMPCVVIPVRKLVKICRDEGVDQVF--VDAAHAMGSIKIDVKEIGADFYVSNLHKWFF 256
V+ P++++ KICR+ ++VF DAA A G I IDV E+ D + HK +
Sbjct: 238 EIG---VIQPLKEIGKICRE---NKVFFHTDAAQAYGKIPIDVNEMNIDLLSISSHK-IY 290
Query: 257 CPPSVAFLYCRK 268
P + Y R+
Sbjct: 291 GPKGIGACYVRR 302
>sp|B1JJ48|SUFS_YERPY Cysteine desulfurase OS=Yersinia pseudotuberculosis serotype O:3
(strain YPIII) GN=sufS PE=3 SV=1
Length = 406
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 17/187 (9%)
Query: 86 RAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKK 145
R V D I+A EI V T A +V GR F D++++ A
Sbjct: 73 RTQVADFIHAASAEEIIFVRGTTEAINLVANSYGRHFLAA----GDSIIITEMEHHANIV 128
Query: 146 SIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPC 204
Q G VE+++ +PL + E+ I I+ RL + ++++
Sbjct: 129 PWQMLAQDLG---VEIRV-WPLTATGELEITALAALIDD------TTRLLAVTQVSNVLG 178
Query: 205 VVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFL 264
V P++ +V + G+ V VD A A+ +DV+ +G DFYV + HK + P + L
Sbjct: 179 TVNPIKDIVAQAKAAGL-VVLVDGAQAVMHQPVDVQALGCDFYVFSGHK-LYGPSGIGIL 236
Query: 265 YCRKSIL 271
Y + ++L
Sbjct: 237 YGKSALL 243
>sp|Q66A22|SUFS_YERPS Cysteine desulfurase OS=Yersinia pseudotuberculosis serotype I
(strain IP32953) GN=sufS PE=3 SV=1
Length = 406
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 17/187 (9%)
Query: 86 RAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKK 145
R V D I+A EI V T A +V GR F D++++ A
Sbjct: 73 RTQVADFIHAASAEEIIFVRGTTEAINLVANSYGRHFLAA----GDSIIITEMEHHANIV 128
Query: 146 SIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPC 204
Q G VE+++ +PL + E+ I I+ RL + ++++
Sbjct: 129 PWQMLAQDLG---VEIRV-WPLTATGELKITALAALIDD------TTRLLAVTQVSNVLG 178
Query: 205 VVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFL 264
V P++ +V + G+ V VD A A+ +DV+ +G DFYV + HK + P + L
Sbjct: 179 TVNPIKDIVAQAKAAGL-VVLVDGAQAVMHQPVDVQALGCDFYVFSGHK-LYGPSGIGIL 236
Query: 265 YCRKSIL 271
Y + ++L
Sbjct: 237 YGKSALL 243
>sp|A4TIP2|SUFS_YERPP Cysteine desulfurase OS=Yersinia pestis (strain Pestoides F)
GN=sufS PE=3 SV=1
Length = 406
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 17/187 (9%)
Query: 86 RAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKK 145
R V D I+A EI V T A +V GR F D++++ A
Sbjct: 73 RTQVADFIHAASAEEIIFVRGTTEAINLVANSYGRHFLAA----GDSIIITEMEHHANIV 128
Query: 146 SIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPC 204
Q G VE+++ +PL + E+ I I+ RL + ++++
Sbjct: 129 PWQMLAQDLG---VEIRV-WPLTATGELEITALAALIDD------TTRLLAVTQVSNVLG 178
Query: 205 VVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFL 264
V P++ +V + G+ V VD A A+ +DV+ +G DFYV + HK + P + L
Sbjct: 179 TVNPIKDIVAQAKAAGL-VVLVDGAQAVMHQPVDVQALGCDFYVFSGHK-LYGPSGIGIL 236
Query: 265 YCRKSIL 271
Y + ++L
Sbjct: 237 YGKSALL 243
>sp|Q1CIJ6|SUFS_YERPN Cysteine desulfurase OS=Yersinia pestis bv. Antiqua (strain
Nepal516) GN=sufS PE=3 SV=1
Length = 406
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 17/187 (9%)
Query: 86 RAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKK 145
R V D I+A EI V T A +V GR F D++++ A
Sbjct: 73 RTQVADFIHAASAEEIIFVRGTTEAINLVANSYGRHFLAA----GDSIIITEMEHHANIV 128
Query: 146 SIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPC 204
Q G VE+++ +PL + E+ I I+ RL + ++++
Sbjct: 129 PWQMLAQDLG---VEIRV-WPLTATGELEITALAALIDD------TTRLLAVTQVSNVLG 178
Query: 205 VVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFL 264
V P++ +V + G+ V VD A A+ +DV+ +G DFYV + HK + P + L
Sbjct: 179 TVNPIKDIVAQAKAAGL-VVLVDGAQAVMHQPVDVQALGCDFYVFSGHK-LYGPSGIGIL 236
Query: 265 YCRKSIL 271
Y + ++L
Sbjct: 237 YGKSALL 243
>sp|Q8D0M6|SUFS_YERPE Cysteine desulfurase OS=Yersinia pestis GN=sufS PE=3 SV=2
Length = 406
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 17/187 (9%)
Query: 86 RAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKK 145
R V D I+A EI V T A +V GR F D++++ A
Sbjct: 73 RTQVADFIHAASAEEIIFVRGTTEAINLVANSYGRHFLAA----GDSIIITEMEHHANIV 128
Query: 146 SIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPC 204
Q G VE+++ +PL + E+ I I+ RL + ++++
Sbjct: 129 PWQMLAQDLG---VEIRV-WPLTATGELEITALAALIDD------TTRLLAVTQVSNVLG 178
Query: 205 VVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFL 264
V P++ +V + G+ V VD A A+ +DV+ +G DFYV + HK + P + L
Sbjct: 179 TVNPIKDIVAQAKAAGL-VVLVDGAQAVMHQPVDVQALGCDFYVFSGHK-LYGPSGIGIL 236
Query: 265 YCRKSIL 271
Y + ++L
Sbjct: 237 YGKSALL 243
>sp|B2K5J4|SUFS_YERPB Cysteine desulfurase OS=Yersinia pseudotuberculosis serotype IB
(strain PB1/+) GN=sufS PE=3 SV=1
Length = 406
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 17/187 (9%)
Query: 86 RAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKK 145
R V D I+A EI V T A +V GR F D++++ A
Sbjct: 73 RTQVADFIHAASAEEIIFVRGTTEAINLVANSYGRHFLAA----GDSIIITEMEHHANIV 128
Query: 146 SIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPC 204
Q G VE+++ +PL + E+ I I+ RL + ++++
Sbjct: 129 PWQMLAQDLG---VEIRV-WPLTATGELKITALAALIDD------TTRLLAVTQVSNVLG 178
Query: 205 VVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFL 264
V P++ +V + G+ V VD A A+ +DV+ +G DFYV + HK + P + L
Sbjct: 179 TVNPIKDIVAQAKAAGL-VVLVDGAQAVMHQPVDVQALGCDFYVFSGHK-LYGPSGIGIL 236
Query: 265 YCRKSIL 271
Y + ++L
Sbjct: 237 YGKSALL 243
>sp|Q1C761|SUFS_YERPA Cysteine desulfurase OS=Yersinia pestis bv. Antiqua (strain
Antiqua) GN=sufS PE=3 SV=1
Length = 406
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 17/187 (9%)
Query: 86 RAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKK 145
R V D I+A EI V T A +V GR F D++++ A
Sbjct: 73 RTQVADFIHAASAEEIIFVRGTTEAINLVANSYGRHFLAA----GDSIIITEMEHHANIV 128
Query: 146 SIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPC 204
Q G VE+++ +PL + E+ I I+ RL + ++++
Sbjct: 129 PWQMLAQDLG---VEIRV-WPLTATGELEITALAALIDD------TTRLLAVTQVSNVLG 178
Query: 205 VVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFL 264
V P++ +V + G+ V VD A A+ +DV+ +G DFYV + HK + P + L
Sbjct: 179 TVNPIKDIVAQAKAAGL-VVLVDGAQAVMHQPVDVQALGCDFYVFSGHK-LYGPSGIGIL 236
Query: 265 YCRKSIL 271
Y + ++L
Sbjct: 237 YGKSALL 243
>sp|A9QZC9|SUFS_YERPG Cysteine desulfurase OS=Yersinia pestis bv. Antiqua (strain Angola)
GN=sufS PE=3 SV=1
Length = 406
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 17/187 (9%)
Query: 86 RAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKK 145
R V D I+A EI V T A +V GR F D++++ A
Sbjct: 73 RTQVADFIHAASAEEIIFVRGTTEAINLVANSYGRHFLAA----GDSIIITEMEHHANIV 128
Query: 146 SIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPC 204
Q G VE+++ +PL + E+ I I+ RL + ++++
Sbjct: 129 PWQMLAQDLG---VEIRV-WPLTATGELEITALAALIDD------TTRLLAVTQVSNVLG 178
Query: 205 VVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFL 264
V P++ +V + G+ V VD A A+ +DV+ +G DFYV + HK + P + L
Sbjct: 179 TVNPIKDIVAQAKAAGL-VVLVDGAQAVMHQPVDVQALGCDFYVFSGHK-LYGPSGIGIL 236
Query: 265 YCRKSIL 271
Y + ++L
Sbjct: 237 YGKSALL 243
>sp|P42253|YCBU_BACSU Uncharacterized aminotransferase YcbU OS=Bacillus subtilis (strain
168) GN=ycbU PE=3 SV=3
Length = 370
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 97/249 (38%), Gaps = 43/249 (17%)
Query: 48 FGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGI-----LE----SRAAVKDLINA--D 96
SC +S LA+ ++ D+Y + L KG +E +R LI A D
Sbjct: 21 LASCSQSALAEPVSRAIQ------DYYDSLLYKGTNWKEAIEKTEFARNEFAKLIGAEPD 74
Query: 97 DVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGG 156
+V + V +A + A L G+ V+ F AV QA+
Sbjct: 75 EVAIVPSVSDALVSVASSLTAFGKKH----------VVYTDMDFPAVPHVWQAHSDYTVS 124
Query: 157 SVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKIC 216
+ + PL E I++ L + H+ V ++ + +I
Sbjct: 125 VIPSIDGVLPLEQYETHISD-------------ETVLTCVPHVHYRDGYVQDIKAIAEIS 171
Query: 217 RDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMH 276
+ +G +FVDA + G I IDVKE G D + K+ P VAFLY RK + +D
Sbjct: 172 QRKG-SLLFVDAYQSAGHIPIDVKEWGVDMLAAGTRKYLLGIPGVAFLYVRKEL--ADAL 228
Query: 277 HPVVSHEFG 285
P S FG
Sbjct: 229 KPKASAWFG 237
>sp|Q9HMM6|CSD_HALSA Probable cysteine desulfurase OS=Halobacterium salinarum (strain
ATCC 700922 / JCM 11081 / NRC-1) GN=csd PE=3 SV=1
Length = 415
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 65/144 (45%), Gaps = 14/144 (9%)
Query: 198 HITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFC 257
HI++ V PV +L I D G +FVD A A + +DV+EI ADFY + HK
Sbjct: 179 HISNTLGTVNPVGELADIAHDHGA-YIFVDGAQAAPTRAVDVQEIDADFYAFSGHK-MLG 236
Query: 258 PPSVAFLYCRKSILS--------SDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSA 309
P + LY ++ +L+ DM V + P GT + + + A
Sbjct: 237 PTGIGCLYGKRHLLAEMEPFLYGGDMIERVSYEDATWNDPPWKFEAGTPVIAQGIALAEA 296
Query: 310 VTFVSRFEGGIDGIMQRNHEQALK 333
V ++ G+D I R HE+AL
Sbjct: 297 VDYLQDI--GMDAI--RAHEEALT 316
>sp|P87187|NFS1_CANMA Cysteine desulfurase, mitochondrial OS=Candida maltosa GN=SPL1 PE=3
SV=1
Length = 484
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 91/192 (47%), Gaps = 23/192 (11%)
Query: 80 KGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCA 139
K + ++R + D+INAD EI AT + ++ + R + + + H T C
Sbjct: 127 KEVEKARGYIADVINADP-KEIIFTSGATETNNMAIKGVPRFYKKTKKHIITTQTEHKCV 185
Query: 140 FQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDH 198
+ + ++ G + + P+ SE I +++ KK I +KD ++ + +++
Sbjct: 186 LDSAR-----HMQDEGFDITYL----PVNSEGLINLDDLKKAI---RKDTVLVSVMAVNN 233
Query: 199 ITSMPCVVIPVRKLVKICRDEGVDQVF--VDAAHAMGSIKIDVKEIGADFYVSNLHKWFF 256
V+ P++++ +ICR+ +++F DAA A G I IDV E+ D + HK +
Sbjct: 234 EIG---VIQPLKEIGQICRE---NKIFFHTDAAQAYGKIPIDVNEMNIDLLSISSHK-IY 286
Query: 257 CPPSVAFLYCRK 268
P + Y R+
Sbjct: 287 GPKGIGACYVRR 298
>sp|Q54X04|NFS1_DICDI Probable cysteine desulfurase, mitochondrial OS=Dictyostelium
discoideum GN=nfs1 PE=1 SV=1
Length = 450
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 17/185 (9%)
Query: 84 ESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAV 143
++R V +I AD EI AT + I ++ + R + E + H TV C +
Sbjct: 98 DAREKVSKIIGADS-KEIIFTSGATESGNIAIKGVARFYKEKKNHIITTVTEHKCILDSC 156
Query: 144 KKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMP 203
+ ++ G V P+ + E K + L I + +
Sbjct: 157 R-----HLEMEGFKVTY----LPVGENGLVDLELLKNTITPQTS-----LVTIMAVNNEI 202
Query: 204 CVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAF 263
VV P++++ KICR+ GV DAA A+G I IDV ++ D + HK + P V
Sbjct: 203 GVVQPIKEIGKICRENGV-FFHTDAAQAVGKIPIDVNDMNIDLLSISGHK-IYGPKGVGA 260
Query: 264 LYCRK 268
L+ R+
Sbjct: 261 LFVRR 265
>sp|Q8NXH0|CSD_STAAW Probable cysteine desulfurase OS=Staphylococcus aureus (strain MW2)
GN=csd PE=3 SV=1
Length = 413
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 145/370 (39%), Gaps = 52/370 (14%)
Query: 81 GILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAF 140
G +R V+ INA EI T + +V G E D +++
Sbjct: 71 GYENARETVRRFINAKYFEEIIFTRGTTASINLVAHSYGDANVE----EGDEIVVTEMEH 126
Query: 141 QAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHI 199
A Q R ++ + P+ ++ E+ I + K+ I K + I HI
Sbjct: 127 HANIVPWQQLAKRKNATLKFI----PMTADGELNIEDIKQTINDKTK------IVAIAHI 176
Query: 200 TSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPP 259
+++ + V+ + +I G + VD A A +K+D++E+ ADFY + HK P
Sbjct: 177 SNVLGTINDVKTIAEIAHQHGA-IISVDGAQAAPHMKLDMQEMNADFYSFSGHK-MLGPT 234
Query: 260 SVAFLYCRKSILSSDMHHPVVSHEFGNGL-----PIESAW--------IGTRDYSAQLVI 306
+ L+ ++ +L P+ EFG + ++ W GT + + +
Sbjct: 235 GIGVLFGKRELLQK--MEPI---EFGGDMIDFVSKYDATWADLPTKFEAGTPLIAQAIGL 289
Query: 307 PSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLR 366
A+ ++ R G D I + E + ++ G + PP+ A V+ +
Sbjct: 290 AEAIRYLERI--GFDAIHKYEQELTIYAYEQMSAIEGIEIYGPPKDRRAGVITFNLQDVH 347
Query: 367 VMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTL 426
A+ G + VR G H+ A QP + ++ AR S +YNT
Sbjct: 348 PHDVATAVDTEG-VAVRAG-----HHCA-----QPLMKWLN----VSSTARASFYIYNTK 392
Query: 427 EDYEKFRDAV 436
ED ++ +A+
Sbjct: 393 EDVDQLINAL 402
>sp|Q6GB11|CSD_STAAS Probable cysteine desulfurase OS=Staphylococcus aureus (strain
MSSA476) GN=csd PE=3 SV=1
Length = 413
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 145/370 (39%), Gaps = 52/370 (14%)
Query: 81 GILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAF 140
G +R V+ INA EI T + +V G E D +++
Sbjct: 71 GYENARETVRRFINAKYFEEIIFTRGTTASINLVAHSYGDANVE----EGDEIVVTEMEH 126
Query: 141 QAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHI 199
A Q R ++ + P+ ++ E+ I + K+ I K + I HI
Sbjct: 127 HANIVPWQQLAKRKNATLKFI----PMTADGELNIEDIKQTINDKTK------IVAIAHI 176
Query: 200 TSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPP 259
+++ + V+ + +I G + VD A A +K+D++E+ ADFY + HK P
Sbjct: 177 SNVLGTINDVKTIAEIAHQHGA-IISVDGAQAAPHMKLDMQEMNADFYSFSGHK-MLGPT 234
Query: 260 SVAFLYCRKSILSSDMHHPVVSHEFGNGL-----PIESAW--------IGTRDYSAQLVI 306
+ L+ ++ +L P+ EFG + ++ W GT + + +
Sbjct: 235 GIGVLFGKRELLQK--MEPI---EFGGDMIDFVSKYDATWADLPTKFEAGTPLIAQAIGL 289
Query: 307 PSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLR 366
A+ ++ R G D I + E + ++ G + PP+ A V+ +
Sbjct: 290 AEAIRYLERI--GFDAIHKYEQELTIYAYEQMSAIEGIEIYGPPKDRRAGVITFNLQDVH 347
Query: 367 VMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTL 426
A+ G + VR G H+ A QP + ++ AR S +YNT
Sbjct: 348 PHDVATAVDTEG-VAVRAG-----HHCA-----QPLMKWLN----VSSTARASFYIYNTK 392
Query: 427 EDYEKFRDAV 436
ED ++ +A+
Sbjct: 393 EDVDQLINAL 402
>sp|Q6GIH2|CSD_STAAR Probable cysteine desulfurase OS=Staphylococcus aureus (strain
MRSA252) GN=csd PE=3 SV=1
Length = 413
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 145/370 (39%), Gaps = 52/370 (14%)
Query: 81 GILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAF 140
G +R V+ INA EI T + +V G E D +++
Sbjct: 71 GYENARETVRRFINAKYFEEIIFTRGTTASINLVAHSYGDANVE----EGDEIVVTEMEH 126
Query: 141 QAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHI 199
A Q R ++ + P+ ++ E+ I + K+ I K + I HI
Sbjct: 127 HANIVPWQQLAKRKNATLKFI----PMTADGELNIEDIKQTINDKTK------IVAIAHI 176
Query: 200 TSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPP 259
+++ + V+ + +I G + VD A A +K+D++E+ ADFY + HK P
Sbjct: 177 SNVLGTINDVKTIAEIAHQHGA-IISVDGAQAAPHMKLDMQEMNADFYSFSGHK-MLGPT 234
Query: 260 SVAFLYCRKSILSSDMHHPVVSHEFGNGL-----PIESAW--------IGTRDYSAQLVI 306
+ L+ ++ +L P+ EFG + ++ W GT + + +
Sbjct: 235 GIGVLFGKRELLQK--MEPI---EFGGDMIDFVSKYDATWADLPTKFEAGTPLIAQAIGL 289
Query: 307 PSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLR 366
A+ ++ R G D I + E + ++ G + PP+ A V+ +
Sbjct: 290 AEAIRYLERI--GFDAIHKYEQELTIYAYEQMSAIEGIEIYGPPKDRRAGVITFNLQDVH 347
Query: 367 VMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTL 426
A+ G + VR G H+ A QP + ++ AR S +YNT
Sbjct: 348 PHDVATAVDTEG-VAVRAG-----HHCA-----QPLMKWLN----VSSTARASFYIYNTK 392
Query: 427 EDYEKFRDAV 436
ED ++ +A+
Sbjct: 393 EDVDQLINAL 402
>sp|Q5HHH0|CSD_STAAC Probable cysteine desulfurase OS=Staphylococcus aureus (strain COL)
GN=csd PE=3 SV=1
Length = 413
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 145/370 (39%), Gaps = 52/370 (14%)
Query: 81 GILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAF 140
G +R V+ INA EI T + +V G E D +++
Sbjct: 71 GYENARETVRRFINAKYFEEIIFTRGTTASINLVAHSYGDANVE----EGDEIVVTEMEH 126
Query: 141 QAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHI 199
A Q R ++ + P+ ++ E+ I + K+ I K + I HI
Sbjct: 127 HANIVPWQQLAKRKNATLKFI----PMTADGELNIEDIKQTINDKTK------IVAIAHI 176
Query: 200 TSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPP 259
+++ + V+ + +I G + VD A A +K+D++E+ ADFY + HK P
Sbjct: 177 SNVLGTINDVKTIAEIAHQHGA-IISVDGAQAAPHMKLDMQEMNADFYSFSGHK-MLGPT 234
Query: 260 SVAFLYCRKSILSSDMHHPVVSHEFGNGL-----PIESAW--------IGTRDYSAQLVI 306
+ L+ ++ +L P+ EFG + ++ W GT + + +
Sbjct: 235 GIGVLFGKRELLQK--MEPI---EFGGDMIDFVSKYDATWADLPTKFEAGTPLIAQAIGL 289
Query: 307 PSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLR 366
A+ ++ R G D I + E + ++ G + PP+ A V+ +
Sbjct: 290 AEAIRYLERI--GFDAIHKYEQELTIYAYEQMSAIEGIEIYGPPKDRRAGVITFNLQDVH 347
Query: 367 VMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTL 426
A+ G + VR G H+ A QP + ++ AR S +YNT
Sbjct: 348 PHDVATAVDTEG-VAVRAG-----HHCA-----QPLMKWLN----VSSTARASFYIYNTK 392
Query: 427 EDYEKFRDAV 436
ED ++ +A+
Sbjct: 393 EDVDQLINAL 402
>sp|P99177|CSD_STAAN Probable cysteine desulfurase OS=Staphylococcus aureus (strain
N315) GN=csd PE=1 SV=1
Length = 413
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 145/370 (39%), Gaps = 52/370 (14%)
Query: 81 GILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAF 140
G +R V+ INA EI T + +V G E D +++
Sbjct: 71 GYENARETVRRFINAKYFEEIIFTRGTTASINLVAHSYGDANVE----EGDEIVVTEMEH 126
Query: 141 QAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHI 199
A Q R ++ + P+ ++ E+ I + K+ I K + I HI
Sbjct: 127 HANIVPWQQLAKRKNATLKFI----PMTADGELNIEDIKQTINDKTK------IVAIAHI 176
Query: 200 TSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPP 259
+++ + V+ + +I G + VD A A +K+D++E+ ADFY + HK P
Sbjct: 177 SNVLGTINDVKTIAEIAHQHGA-IISVDGAQAAPHMKLDMQEMNADFYSFSGHK-MLGPT 234
Query: 260 SVAFLYCRKSILSSDMHHPVVSHEFGNGL-----PIESAW--------IGTRDYSAQLVI 306
+ L+ ++ +L P+ EFG + ++ W GT + + +
Sbjct: 235 GIGVLFGKRELLQK--MEPI---EFGGDMIDFVSKYDATWADLPTKFEAGTPLIAQAIGL 289
Query: 307 PSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLR 366
A+ ++ R G D I + E + ++ G + PP+ A V+ +
Sbjct: 290 AEAIRYLERI--GFDAIHKYEQELTIYAYEQMSAIEGIEIYGPPKDRRAGVITFNLQDVH 347
Query: 367 VMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTL 426
A+ G + VR G H+ A QP + ++ AR S +YNT
Sbjct: 348 PHDVATAVDTEG-VAVRAG-----HHCA-----QPLMKWLN----VSSTARASFYIYNTK 392
Query: 427 EDYEKFRDAV 436
ED ++ +A+
Sbjct: 393 EDIDQLINAL 402
>sp|P63518|CSD_STAAM Probable cysteine desulfurase OS=Staphylococcus aureus (strain Mu50
/ ATCC 700699) GN=csd PE=1 SV=1
Length = 413
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 145/370 (39%), Gaps = 52/370 (14%)
Query: 81 GILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAF 140
G +R V+ INA EI T + +V G E D +++
Sbjct: 71 GYENARETVRRFINAKYFEEIIFTRGTTASINLVAHSYGDANVE----EGDEIVVTEMEH 126
Query: 141 QAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHI 199
A Q R ++ + P+ ++ E+ I + K+ I K + I HI
Sbjct: 127 HANIVPWQQLAKRKNATLKFI----PMTADGELNIEDIKQTINDKTK------IVAIAHI 176
Query: 200 TSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPP 259
+++ + V+ + +I G + VD A A +K+D++E+ ADFY + HK P
Sbjct: 177 SNVLGTINDVKTIAEIAHQHGA-IISVDGAQAAPHMKLDMQEMNADFYSFSGHK-MLGPT 234
Query: 260 SVAFLYCRKSILSSDMHHPVVSHEFGNGL-----PIESAW--------IGTRDYSAQLVI 306
+ L+ ++ +L P+ EFG + ++ W GT + + +
Sbjct: 235 GIGVLFGKRELLQK--MEPI---EFGGDMIDFVSKYDATWADLPTKFEAGTPLIAQAIGL 289
Query: 307 PSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLR 366
A+ ++ R G D I + E + ++ G + PP+ A V+ +
Sbjct: 290 AEAIRYLERI--GFDAIHKYEQELTIYAYEQMSAIEGIEIYGPPKDRRAGVITFNLQDVH 347
Query: 367 VMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTL 426
A+ G + VR G H+ A QP + ++ AR S +YNT
Sbjct: 348 PHDVATAVDTEG-VAVRAG-----HHCA-----QPLMKWLN----VSSTARASFYIYNTK 392
Query: 427 EDYEKFRDAV 436
ED ++ +A+
Sbjct: 393 EDIDQLINAL 402
>sp|A6TAE4|SUFS_KLEP7 Cysteine desulfurase OS=Klebsiella pneumoniae subsp. pneumoniae
(strain ATCC 700721 / MGH 78578) GN=sufS PE=3 SV=1
Length = 406
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 192 RLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNL 251
RL I ++++ P+ L+ + G +V VD A A+ +DV+ +G DFYV +
Sbjct: 166 RLLAITEVSNVLGTENPLAALIALAHQHGA-KVLVDGAQAVMHHPVDVQALGCDFYVFSA 224
Query: 252 HKWFFCPPSVAFLYCRKSILSS 273
HK + P + LY R +L +
Sbjct: 225 HK-LYGPTGIGVLYARSELLQT 245
>sp|O30207|SPSS1_ARCFU O-phospho-L-seryl-tRNA:Cys-tRNA synthase 1 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=AF_0028 PE=1 SV=1
Length = 371
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 177 FKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIK 236
F + IE+ KK G+++ LA+I + + V+K+ K+C + V + V+ A+A+G +
Sbjct: 135 FAQTIEETKKRGEVV-LALITYPDGNYGNLPDVKKIAKVCSEYDV-PLLVNGAYAIGRMP 192
Query: 237 IDVKEIGADFYVSNLHK 253
+ +KEIGADF V + HK
Sbjct: 193 VSLKEIGADFIVGSGHK 209
>sp|Q0THE9|SUFS_ECOL5 Cysteine desulfurase OS=Escherichia coli O6:K15:H31 (strain 536 /
UPEC) GN=sufS PE=3 SV=1
Length = 406
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 192 RLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNL 251
RL I H++++ P+ +++ + G +V VD A A+ +DV+ + DFYV ++
Sbjct: 166 RLLAITHVSNVLGTENPLAEMITLAHQHGA-KVLVDGAQAVMHHPVDVQALDCDFYVFSV 224
Query: 252 HKWFFCPPSVAFLYCRKSIL 271
HK + P + LY ++++L
Sbjct: 225 HK-LYGPTGIGILYVKEALL 243
>sp|P25374|NFS1_YEAST Cysteine desulfurase, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NFS1 PE=1 SV=2
Length = 497
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 83/184 (45%), Gaps = 17/184 (9%)
Query: 85 SRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVK 144
+RA V +INAD EI AT + +VL+ + R + + + H T C +A +
Sbjct: 147 ARAHVAKMINADP-KEIIFTSGATESNNMVLKGVPRFYKKTKKHIITTRTEHKCVLEAAR 205
Query: 145 KSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPC 204
++ EV L +++ + + K+ + + D ++ + +++
Sbjct: 206 AMMK--------EGFEVTF---LNVDDQGLIDLKELEDAIRPDTCLVSVMAVNNEIG--- 251
Query: 205 VVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFL 264
V+ P++++ ICR + DAA A G I IDV E+ D + HK + P + +
Sbjct: 252 VIQPIKEIGAICRKNKI-YFHTDAAQAYGKIHIDVNEMNIDLLSISSHK-IYGPKGIGAI 309
Query: 265 YCRK 268
Y R+
Sbjct: 310 YVRR 313
>sp|B5F7C4|SUFS_SALA4 Cysteine desulfurase OS=Salmonella agona (strain SL483) GN=sufS
PE=3 SV=1
Length = 406
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 192 RLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNL 251
RL I H++++ P+ ++ + R G +V VD A A+ +DV+ + DFYV +
Sbjct: 166 RLLAITHVSNVLGTENPLPDMIALARQHGA-KVLVDGAQAVMHHAVDVQALDCDFYVFSG 224
Query: 252 HKWFFCPPSVAFLYCRKSIL 271
HK + P + LY ++++L
Sbjct: 225 HK-LYGPTGIGILYVKEALL 243
>sp|Q7CQN5|SUFS_SALTY Cysteine desulfurase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=sufS PE=3 SV=1
Length = 406
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 192 RLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNL 251
RL I H++++ P+ ++ + R G +V VD A A+ +DV+ + DFYV +
Sbjct: 166 RLLAITHVSNVLGTENPLPDMIALARQHGA-KVLVDGAQAVMHHAVDVQALDCDFYVFSG 224
Query: 252 HKWFFCPPSVAFLYCRKSIL 271
HK + P + LY ++++L
Sbjct: 225 HK-LYGPTGIGILYVKEALL 243
>sp|Q8XF77|SUFS_SALTI Cysteine desulfurase OS=Salmonella typhi GN=sufS PE=3 SV=1
Length = 406
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 192 RLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNL 251
RL I H++++ P+ ++ + R G +V VD A A+ +DV+ + DFYV +
Sbjct: 166 RLLAITHVSNVLGTENPLPDMIALARQHGA-KVLVDGAQAVMHHAVDVQALDCDFYVFSG 224
Query: 252 HKWFFCPPSVAFLYCRKSIL 271
HK + P + LY ++++L
Sbjct: 225 HK-LYGPTGIGILYVKEALL 243
>sp|B4T4R6|SUFS_SALNS Cysteine desulfurase OS=Salmonella newport (strain SL254) GN=sufS
PE=3 SV=1
Length = 406
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 192 RLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNL 251
RL I H++++ P+ ++ + R G +V VD A A+ +DV+ + DFYV +
Sbjct: 166 RLLAITHVSNVLGTENPLPDMIALARQHGA-KVLVDGAQAVMHHAVDVQALDCDFYVFSG 224
Query: 252 HKWFFCPPSVAFLYCRKSIL 271
HK + P + LY ++++L
Sbjct: 225 HK-LYGPTGIGILYVKEALL 243
>sp|B4TGK9|SUFS_SALHS Cysteine desulfurase OS=Salmonella heidelberg (strain SL476)
GN=sufS PE=3 SV=1
Length = 406
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 192 RLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNL 251
RL I H++++ P+ ++ + R G +V VD A A+ +DV+ + DFYV +
Sbjct: 166 RLLAITHVSNVLGTENPLPDMIALARQHGA-KVLVDGAQAVMHHAVDVQALDCDFYVFSG 224
Query: 252 HKWFFCPPSVAFLYCRKSIL 271
HK + P + LY ++++L
Sbjct: 225 HK-LYGPTGIGILYVKEALL 243
>sp|B5QVS9|SUFS_SALEP Cysteine desulfurase OS=Salmonella enteritidis PT4 (strain P125109)
GN=sufS PE=3 SV=1
Length = 406
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 192 RLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNL 251
RL I H++++ P+ ++ + R G +V VD A A+ +DV+ + DFYV +
Sbjct: 166 RLLAITHVSNVLGTENPLPDMIALARQHGA-KVLVDGAQAVMHHAVDVQALDCDFYVFSG 224
Query: 252 HKWFFCPPSVAFLYCRKSIL 271
HK + P + LY ++++L
Sbjct: 225 HK-LYGPTGIGILYVKEALL 243
>sp|B5RAT4|SUFS_SALG2 Cysteine desulfurase OS=Salmonella gallinarum (strain 287/91 / NCTC
13346) GN=sufS PE=3 SV=1
Length = 406
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 192 RLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNL 251
RL I H++++ P+ ++ + R G +V VD A A+ +DV+ + DFYV +
Sbjct: 166 RLLAITHVSNVLGTENPLPDMIALARQHGA-KVLVDGAQAVMHHAVDVQALDCDFYVFSG 224
Query: 252 HKWFFCPPSVAFLYCRKSIL 271
HK + P + LY ++++L
Sbjct: 225 HK-LYGPTGIGILYVKEALL 243
>sp|C6DKM6|SUFS_PECCP Cysteine desulfurase OS=Pectobacterium carotovorum subsp.
carotovorum (strain PC1) GN=sufS PE=3 SV=1
Length = 407
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 15/188 (7%)
Query: 86 RAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKK 145
R V INA V EI V T A +V GR F + D +++ A
Sbjct: 73 REQVAAFINAASVEEIVFVRGTTEAINLVANSYGRTFIQ----PGDNLIITEMEHHA--- 125
Query: 146 SIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCV 205
+I + A VEV++ PLA + + G+ + RL + I+++
Sbjct: 126 NIVPWQMLAEARGVEVRV-LPLAEDGSLDVAQLPGLLDERT-----RLLAVTQISNVLGA 179
Query: 206 VIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLY 265
+ PV+ ++ + G VD A ++ +DV+++ DF+V + HK + P + LY
Sbjct: 180 LNPVKTMIAQAKAVGA-VTLVDGAQSIMHQTVDVQDLDCDFFVFSGHK-IYGPSGIGVLY 237
Query: 266 CRKSILSS 273
++ +L +
Sbjct: 238 GKRDLLQA 245
>sp|A7MF59|SUFS_CROS8 Cysteine desulfurase OS=Cronobacter sakazakii (strain ATCC BAA-894)
GN=sufS PE=3 SV=1
Length = 406
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 192 RLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNL 251
RL + H++++ P+ ++ GV +V VD A A+ K+DV+ + DFY+ +
Sbjct: 166 RLLAVTHVSNVLGTENPIADIIATAHQAGV-KVLVDGAQAVMHHKVDVQALDCDFYLFSG 224
Query: 252 HKWFFCPPSVAFLYCRKSILSS 273
HK + P + LY ++ IL +
Sbjct: 225 HK-LYGPTGIGILYAKEEILQA 245
>sp|B5FIM3|SUFS_SALDC Cysteine desulfurase OS=Salmonella dublin (strain CT_02021853)
GN=sufS PE=3 SV=1
Length = 406
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 192 RLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNL 251
RL I H++++ P+ ++ + R G +V VD A A+ +DV+ + DFYV +
Sbjct: 166 RLLAITHVSNVLGTENPLPDMIALARQHGA-KVLVDGAQAVMHHAVDVQALDCDFYVFSG 224
Query: 252 HKWFFCPPSVAFLYCRKSIL 271
HK + P + LY ++++L
Sbjct: 225 HK-LYGPTGIGILYVKEALL 243
>sp|A9N142|SUFS_SALPB Cysteine desulfurase OS=Salmonella paratyphi B (strain ATCC
BAA-1250 / SPB7) GN=sufS PE=3 SV=1
Length = 406
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 192 RLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNL 251
RL I H++++ P+ ++ + R G +V VD A A+ +DV+ + DFYV +
Sbjct: 166 RLLAITHVSNVLGTENPLPDMIALARQHGA-KVLVDGAQAVMHHAVDVQALDCDFYVFSG 224
Query: 252 HKWFFCPPSVAFLYCRKSIL 271
HK + P + LY ++++L
Sbjct: 225 HK-LYGPTGIGILYIKEALL 243
>sp|B8D8B6|ISCS_BUCAT Cysteine desulfurase OS=Buchnera aphidicola subsp. Acyrthosiphon
pisum (strain Tuc7) GN=iscS PE=3 SV=1
Length = 404
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 39/195 (20%)
Query: 85 SRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRND-----------TV 133
+R + +LI AD EI AT + + ++ I FH+N
Sbjct: 54 ARNQISELIGADS-REIVFTSGATESNNLAIKGIAS------FHQNKGKHIVTSKTEHKS 106
Query: 134 LMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRL 193
++ C + K Y+T +++ +N KK I KKD ++
Sbjct: 107 VLDTCRYLENKGFTVTYLTPKNNGIID-------------LNNLKKNI---KKDTILVS- 149
Query: 194 AIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHK 253
I H+ + ++ + + +ICR+ GV VDA ++G I ID+K+I D + HK
Sbjct: 150 --IMHVNNEIGIIQDINSISQICRNHGV-FFHVDATQSVGKIPIDLKKIPIDLMSFSAHK 206
Query: 254 WFFCPPSVAFLYCRK 268
+ P + LY R+
Sbjct: 207 -IYGPKGIGGLYVRR 220
>sp|P57657|ISCS_BUCAI Cysteine desulfurase OS=Buchnera aphidicola subsp. Acyrthosiphon
pisum (strain APS) GN=iscS PE=3 SV=1
Length = 404
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 39/195 (20%)
Query: 85 SRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRND-----------TV 133
+R + +LI AD EI AT + + ++ I FH+N
Sbjct: 54 ARNQISELIGADS-REIVFTSGATESNNLAIKGIAS------FHQNKGKHIVTSKTEHKS 106
Query: 134 LMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRL 193
++ C + K Y+T +++ +N KK I KKD ++
Sbjct: 107 VLDTCRYLENKGFTVTYLTPKNNGIID-------------LNNLKKNI---KKDTILVS- 149
Query: 194 AIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHK 253
I H+ + ++ + + +ICR+ GV VDA ++G I ID+K+I D + HK
Sbjct: 150 --IMHVNNEIGIIQDINSISQICRNHGV-FFHVDATQSVGKIPIDLKKIPIDLMSFSAHK 206
Query: 254 WFFCPPSVAFLYCRK 268
+ P + LY R+
Sbjct: 207 -IYGPKGIGGLYVRR 220
>sp|B8D8F9|ISCS_BUCA5 Cysteine desulfurase OS=Buchnera aphidicola subsp. Acyrthosiphon
pisum (strain 5A) GN=iscS PE=3 SV=1
Length = 404
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 39/195 (20%)
Query: 85 SRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRND-----------TV 133
+R + +LI AD EI AT + + ++ I FH+N
Sbjct: 54 ARNQISELIGADS-REIVFTSGATESNNLAIKGIAS------FHQNKGKHIVTSKTEHKS 106
Query: 134 LMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRL 193
++ C + K Y+T +++ +N KK I KKD ++
Sbjct: 107 VLDTCRYLENKGFTVTYLTPKNNGIID-------------LNNLKKNI---KKDTILVS- 149
Query: 194 AIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHK 253
I H+ + ++ + + +ICR+ GV VDA ++G I ID+K+I D + HK
Sbjct: 150 --IMHVNNEIGIIQDINSISQICRNHGV-FFHVDATQSVGKIPIDLKKIPIDLMSFSAHK 206
Query: 254 WFFCPPSVAFLYCRK 268
+ P + LY R+
Sbjct: 207 -IYGPKGIGGLYVRR 220
>sp|A8GDU4|SUFS_SERP5 Cysteine desulfurase OS=Serratia proteamaculans (strain 568)
GN=sufS PE=3 SV=1
Length = 406
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 33/195 (16%)
Query: 86 RAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGF---------TEGRFHRNDTVLML 136
R V INA EI V T +V GR F TE H N ++
Sbjct: 73 REKVAAFINAGSAEEIIFVKGTTEGINLVANSFGRHFLQPGDSIIITEMEHHAN--IVPW 130
Query: 137 HCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAII 196
Q +++ + + G++ +LP G D +L +
Sbjct: 131 QMLAQERGLNLRVWPLQPDGTLDLARLP-------------------GLIDAS-TKLLAL 170
Query: 197 DHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFF 256
++++ V PV+++ + G+ +V +D A A+ ++DV+ + DFYV + HK +
Sbjct: 171 TQVSNVLGTVNPVQEITAQAKAAGL-KVLIDGAQAVMHQRVDVQALDCDFYVFSGHK-LY 228
Query: 257 CPPSVAFLYCRKSIL 271
P + LY R+++L
Sbjct: 229 GPSGIGILYGRQALL 243
>sp|Q57PR2|SUFS_SALCH Cysteine desulfurase OS=Salmonella choleraesuis (strain SC-B67)
GN=sufS PE=3 SV=1
Length = 406
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 192 RLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNL 251
RL I H++++ P+ ++ + R G +V VD A A+ +DV+ + DFYV +
Sbjct: 166 RLLAITHVSNVLGTENPLPDMIALARQHGA-KVLVDGAQAVMHHVVDVQALDCDFYVFSG 224
Query: 252 HKWFFCPPSVAFLYCRKSIL 271
HK + P + LY ++++L
Sbjct: 225 HK-LYGPTGIGILYVKEALL 243
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 169,075,929
Number of Sequences: 539616
Number of extensions: 7146234
Number of successful extensions: 17599
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 307
Number of HSP's that attempted gapping in prelim test: 17524
Number of HSP's gapped (non-prelim): 350
length of query: 452
length of database: 191,569,459
effective HSP length: 121
effective length of query: 331
effective length of database: 126,275,923
effective search space: 41797330513
effective search space used: 41797330513
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)