Query 012978
Match_columns 452
No_of_seqs 116 out of 458
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 19:54:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012978.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012978hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mb5_A SAM-dependent methyltra 99.9 6.6E-27 2.3E-31 224.8 20.1 253 16-445 1-254 (255)
2 1i9g_A Hypothetical protein RV 99.9 8.1E-24 2.8E-28 205.9 20.8 260 14-448 4-265 (280)
3 1o54_A SAM-dependent O-methylt 99.9 6.8E-24 2.3E-28 207.2 19.8 260 12-448 15-274 (277)
4 2pwy_A TRNA (adenine-N(1)-)-me 99.9 1.9E-23 6.4E-28 200.2 17.1 255 15-446 2-257 (258)
5 2yvl_A TRMI protein, hypotheti 99.9 6.1E-20 2.1E-24 174.7 23.3 244 16-445 3-247 (248)
6 2b25_A Hypothetical protein; s 99.8 1.1E-20 3.7E-25 189.8 15.9 271 11-446 4-333 (336)
7 1yb2_A Hypothetical protein TA 99.6 1.1E-13 3.7E-18 134.9 18.9 172 196-446 99-270 (275)
8 3e05_A Precorrin-6Y C5,15-meth 98.5 2.1E-06 7.3E-11 78.7 16.0 172 191-445 24-196 (204)
9 1l3i_A Precorrin-6Y methyltran 98.2 1.2E-05 4.1E-10 71.7 13.0 172 190-445 16-188 (192)
10 2yxd_A Probable cobalt-precorr 98.2 6.8E-05 2.3E-09 66.3 17.6 166 190-443 18-183 (183)
11 3duw_A OMT, O-methyltransferas 97.9 5E-05 1.7E-09 70.4 11.0 53 188-240 39-91 (223)
12 3tfw_A Putative O-methyltransf 97.9 8.6E-05 2.9E-09 70.7 12.1 50 191-240 47-96 (248)
13 3njr_A Precorrin-6Y methylase; 97.9 0.00023 7.9E-09 65.7 14.0 146 191-421 39-185 (204)
14 3tr6_A O-methyltransferase; ce 97.7 8.5E-05 2.9E-09 68.8 9.0 58 183-240 40-97 (225)
15 4df3_A Fibrillarin-like rRNA/T 97.6 0.0004 1.4E-08 66.2 11.8 38 203-240 73-110 (233)
16 3hm2_A Precorrin-6Y C5,15-meth 97.6 0.0013 4.5E-08 57.9 14.0 132 193-403 11-144 (178)
17 3dr5_A Putative O-methyltransf 97.5 0.00035 1.2E-08 65.5 9.3 45 196-240 45-89 (221)
18 2avd_A Catechol-O-methyltransf 97.5 0.00022 7.5E-09 66.1 7.6 57 185-241 47-103 (229)
19 3r3h_A O-methyltransferase, SA 97.4 0.00032 1.1E-08 66.7 8.7 55 188-242 41-95 (242)
20 4fsd_A Arsenic methyltransfera 97.4 0.00024 8.1E-09 72.1 8.0 97 350-449 164-285 (383)
21 1sui_A Caffeoyl-COA O-methyltr 97.3 0.002 6.9E-08 61.2 12.9 58 184-241 56-113 (247)
22 3eey_A Putative rRNA methylase 97.3 0.00075 2.5E-08 61.0 8.6 47 194-240 9-55 (197)
23 3cbg_A O-methyltransferase; cy 97.3 0.00052 1.8E-08 64.4 7.8 51 190-240 55-105 (232)
24 3c3y_A Pfomt, O-methyltransfer 97.3 0.0012 4E-08 62.4 10.0 58 183-240 46-103 (237)
25 3u81_A Catechol O-methyltransf 97.2 0.001 3.5E-08 61.7 9.2 52 189-240 40-91 (221)
26 3ntv_A MW1564 protein; rossman 97.2 0.0006 2.1E-08 63.9 7.2 51 189-240 53-103 (232)
27 2xyq_A Putative 2'-O-methyl tr 97.1 0.00031 1.1E-08 69.1 4.3 71 367-441 152-232 (290)
28 2hnk_A SAM-dependent O-methylt 97.0 0.0011 3.7E-08 62.2 6.7 52 189-240 42-93 (239)
29 1ixk_A Methyltransferase; open 97.0 0.003 1E-07 62.4 10.1 49 192-240 102-151 (315)
30 3id6_C Fibrillarin-like rRNA/T 96.9 0.0014 4.9E-08 62.2 7.3 39 203-241 72-110 (232)
31 3m4x_A NOL1/NOP2/SUN family pr 96.9 0.0051 1.7E-07 64.2 12.0 40 201-240 99-138 (456)
32 3fpf_A Mtnas, putative unchara 96.9 0.0043 1.5E-07 61.1 10.4 38 350-387 186-223 (298)
33 3c3p_A Methyltransferase; NP_9 96.9 0.0021 7E-08 58.9 7.5 50 191-240 40-89 (210)
34 2gpy_A O-methyltransferase; st 96.8 0.002 6.9E-08 59.9 6.9 50 190-240 37-86 (233)
35 3ajd_A Putative methyltransfer 96.7 0.0098 3.4E-07 57.2 11.2 45 196-240 71-116 (274)
36 1dus_A MJ0882; hypothetical pr 96.6 0.0041 1.4E-07 55.1 7.5 60 350-411 117-180 (194)
37 1nkv_A Hypothetical protein YJ 96.6 0.0046 1.6E-07 57.9 8.1 55 184-240 13-67 (256)
38 3kr9_A SAM-dependent methyltra 96.5 0.0059 2E-07 57.8 7.8 66 352-421 84-153 (225)
39 1ej0_A FTSJ; methyltransferase 96.5 0.062 2.1E-06 46.2 13.9 46 196-241 10-56 (180)
40 1fbn_A MJ fibrillarin homologu 96.4 0.0039 1.3E-07 58.1 6.1 44 196-240 60-106 (230)
41 3m6w_A RRNA methylase; rRNA me 96.4 0.014 4.6E-07 61.1 10.8 40 201-240 95-134 (464)
42 3evz_A Methyltransferase; NYSG 96.4 0.012 4E-07 54.3 9.3 38 201-240 49-87 (230)
43 4dzr_A Protein-(glutamine-N5) 96.4 0.032 1.1E-06 50.1 12.0 43 198-241 20-63 (215)
44 1g8a_A Fibrillarin-like PRE-rR 96.3 0.0045 1.5E-07 57.2 6.1 44 197-240 60-106 (227)
45 1inl_A Spermidine synthase; be 96.3 0.049 1.7E-06 53.1 13.4 58 351-412 162-233 (296)
46 3dxy_A TRNA (guanine-N(7)-)-me 96.3 0.011 3.9E-07 54.9 8.5 61 348-410 101-174 (218)
47 3dh0_A SAM dependent methyltra 96.3 0.032 1.1E-06 50.7 11.3 57 181-240 14-70 (219)
48 2bm8_A Cephalosporin hydroxyla 96.2 0.012 4.2E-07 55.4 8.6 53 190-242 63-119 (236)
49 3q87_B N6 adenine specific DNA 96.2 0.014 4.9E-07 51.7 8.3 74 351-427 77-166 (170)
50 2pbf_A Protein-L-isoaspartate 96.2 0.0042 1.4E-07 57.3 4.9 50 191-240 62-117 (227)
51 3hem_A Cyclopropane-fatty-acyl 96.1 0.0094 3.2E-07 57.7 7.4 45 194-240 59-103 (302)
52 2ipx_A RRNA 2'-O-methyltransfe 96.1 0.0092 3.1E-07 55.5 6.8 41 200-240 70-110 (233)
53 1nt2_A Fibrillarin-like PRE-rR 96.1 0.0086 2.9E-07 55.4 6.4 37 203-240 53-89 (210)
54 3a27_A TYW2, uncharacterized p 96.1 0.014 4.6E-07 56.3 8.0 51 351-402 185-240 (272)
55 3grz_A L11 mtase, ribosomal pr 96.0 0.0068 2.3E-07 55.0 5.3 60 351-411 124-183 (205)
56 3bwc_A Spermidine synthase; SA 96.0 0.036 1.2E-06 54.3 10.8 60 350-412 167-239 (304)
57 2yxe_A Protein-L-isoaspartate 96.0 0.0083 2.8E-07 54.7 5.8 50 191-240 61-110 (215)
58 1kpg_A CFA synthase;, cyclopro 96.0 0.019 6.3E-07 54.9 8.5 46 193-240 50-95 (287)
59 3lpm_A Putative methyltransfer 95.9 0.022 7.6E-07 53.9 8.6 45 193-240 35-80 (259)
60 2b9e_A NOL1/NOP2/SUN domain fa 95.9 0.019 6.4E-07 56.7 8.3 45 196-240 90-135 (309)
61 2yxl_A PH0851 protein, 450AA l 95.8 0.016 5.4E-07 60.0 7.9 48 193-240 244-292 (450)
62 2fk8_A Methoxy mycolic acid sy 95.8 0.017 5.8E-07 56.2 7.7 46 193-240 76-121 (318)
63 2frx_A Hypothetical protein YE 95.8 0.017 5.9E-07 60.5 7.9 48 193-240 100-150 (479)
64 1jg1_A PIMT;, protein-L-isoasp 95.7 0.0088 3E-07 55.7 5.0 48 191-240 75-122 (235)
65 1mjf_A Spermidine synthase; sp 95.6 0.11 3.8E-06 50.1 12.6 50 350-401 150-212 (281)
66 1i1n_A Protein-L-isoaspartate 95.6 0.0099 3.4E-07 54.7 4.8 49 192-240 60-110 (226)
67 1xdz_A Methyltransferase GIDB; 95.6 0.069 2.4E-06 49.8 10.7 51 351-402 140-192 (240)
68 2nyu_A Putative ribosomal RNA 95.6 0.11 3.9E-06 46.1 11.6 40 202-241 17-64 (196)
69 3g89_A Ribosomal RNA small sub 95.6 0.049 1.7E-06 51.7 9.6 51 351-402 150-202 (249)
70 1yzh_A TRNA (guanine-N(7)-)-me 95.5 0.1 3.5E-06 47.6 11.3 58 350-410 109-179 (214)
71 2cmg_A Spermidine synthase; tr 95.5 0.05 1.7E-06 52.3 9.5 49 351-401 138-190 (262)
72 2ozv_A Hypothetical protein AT 95.5 0.034 1.1E-06 53.0 8.2 46 193-240 23-68 (260)
73 3lbf_A Protein-L-isoaspartate 95.5 0.012 4.1E-07 53.4 4.8 47 191-240 61-107 (210)
74 3f4k_A Putative methyltransfer 95.5 0.039 1.3E-06 51.5 8.5 50 189-240 27-77 (257)
75 3ckk_A TRNA (guanine-N(7)-)-me 95.5 0.025 8.5E-07 53.3 7.1 59 348-408 119-190 (235)
76 2nxc_A L11 mtase, ribosomal pr 95.4 0.065 2.2E-06 50.8 9.9 62 348-410 180-241 (254)
77 1r18_A Protein-L-isoaspartate( 95.4 0.011 3.9E-07 54.6 4.2 49 192-240 67-122 (227)
78 2fca_A TRNA (guanine-N(7)-)-me 95.3 0.28 9.5E-06 44.9 13.6 59 348-409 104-175 (213)
79 3adn_A Spermidine synthase; am 95.2 0.04 1.4E-06 53.9 7.7 56 351-410 156-224 (294)
80 1iy9_A Spermidine synthase; ro 95.2 0.076 2.6E-06 51.1 9.6 57 350-410 146-215 (275)
81 1sqg_A SUN protein, FMU protei 95.1 0.27 9.2E-06 50.3 14.0 49 192-241 230-279 (429)
82 2esr_A Methyltransferase; stru 95.0 0.062 2.1E-06 47.2 7.9 34 205-240 29-62 (177)
83 3p9n_A Possible methyltransfer 95.0 0.19 6.5E-06 44.7 11.2 33 206-240 43-75 (189)
84 3mgg_A Methyltransferase; NYSG 95.0 0.15 5E-06 48.1 11.0 42 198-240 28-69 (276)
85 2p35_A Trans-aconitate 2-methy 95.0 0.086 3E-06 49.0 9.2 50 190-240 16-65 (259)
86 3dlc_A Putative S-adenosyl-L-m 94.9 0.28 9.6E-06 43.9 12.3 44 194-240 31-74 (219)
87 3ujc_A Phosphoethanolamine N-m 94.9 0.13 4.4E-06 47.8 10.1 47 192-240 40-86 (266)
88 2vdv_E TRNA (guanine-N(7)-)-me 94.8 0.072 2.5E-06 49.9 8.1 54 350-405 126-192 (246)
89 3lec_A NADB-rossmann superfami 94.7 0.097 3.3E-06 49.5 8.8 37 204-241 18-54 (230)
90 3g5t_A Trans-aconitate 3-methy 94.7 0.19 6.3E-06 48.3 11.1 36 205-240 34-69 (299)
91 1u2z_A Histone-lysine N-methyl 94.6 0.056 1.9E-06 55.9 7.3 51 190-241 225-275 (433)
92 1dl5_A Protein-L-isoaspartate 94.6 0.059 2E-06 52.8 7.2 49 192-240 60-108 (317)
93 2i7c_A Spermidine synthase; tr 94.5 0.27 9.2E-06 47.4 11.6 56 350-409 149-217 (283)
94 3kkz_A Uncharacterized protein 94.5 0.078 2.7E-06 50.0 7.5 51 188-240 26-77 (267)
95 3g5l_A Putative S-adenosylmeth 94.5 0.31 1.1E-05 45.2 11.6 42 197-240 34-75 (253)
96 2fhp_A Methylase, putative; al 94.4 0.12 4.1E-06 45.4 8.1 35 204-240 41-75 (187)
97 3mq2_A 16S rRNA methyltransfer 94.3 0.069 2.4E-06 48.7 6.6 48 189-241 13-60 (218)
98 2frn_A Hypothetical protein PH 94.3 0.055 1.9E-06 52.1 6.2 53 350-403 190-248 (278)
99 3mti_A RRNA methylase; SAM-dep 94.2 0.029 9.8E-07 49.8 3.7 42 196-240 11-52 (185)
100 3gnl_A Uncharacterized protein 94.2 0.13 4.4E-06 49.1 8.4 37 204-241 18-54 (244)
101 2plw_A Ribosomal RNA methyltra 94.2 0.24 8E-06 44.2 9.8 47 196-242 10-58 (201)
102 2qm3_A Predicted methyltransfe 94.2 0.15 5.1E-06 51.2 9.3 45 194-240 157-203 (373)
103 3dli_A Methyltransferase; PSI- 94.2 0.44 1.5E-05 43.9 11.9 46 349-394 98-148 (240)
104 3tma_A Methyltransferase; thum 94.1 0.31 1.1E-05 48.3 11.3 52 189-240 185-236 (354)
105 3gu3_A Methyltransferase; alph 94.0 0.15 5.1E-06 48.7 8.6 50 191-240 5-55 (284)
106 3gjy_A Spermidine synthase; AP 94.0 0.27 9.4E-06 48.6 10.6 57 182-240 60-121 (317)
107 1vbf_A 231AA long hypothetical 94.0 0.07 2.4E-06 49.0 5.9 47 191-240 54-100 (231)
108 3i9f_A Putative type 11 methyl 94.0 0.041 1.4E-06 47.9 4.1 41 197-240 7-47 (170)
109 3vc1_A Geranyl diphosphate 2-C 93.9 0.14 4.6E-06 49.7 8.1 43 196-240 105-148 (312)
110 4gek_A TRNA (CMO5U34)-methyltr 93.9 0.091 3.1E-06 50.2 6.7 37 204-240 67-104 (261)
111 3orh_A Guanidinoacetate N-meth 93.9 0.043 1.5E-06 51.4 4.3 33 206-240 59-91 (236)
112 1uir_A Polyamine aminopropyltr 93.6 0.44 1.5E-05 46.6 11.3 59 350-410 149-222 (314)
113 2o07_A Spermidine synthase; st 93.6 0.44 1.5E-05 46.5 11.2 35 205-240 93-127 (304)
114 2pt6_A Spermidine synthase; tr 93.5 0.4 1.4E-05 47.2 10.8 57 350-410 187-256 (321)
115 3e8s_A Putative SAM dependent 93.4 0.29 9.8E-06 44.1 8.8 41 197-240 42-82 (227)
116 4dcm_A Ribosomal RNA large sub 93.1 0.25 8.6E-06 49.8 8.8 42 198-240 213-254 (375)
117 3ccf_A Cyclopropane-fatty-acyl 93.1 0.16 5.5E-06 48.2 7.0 40 198-240 48-87 (279)
118 2b2c_A Spermidine synthase; be 93.0 0.6 2E-05 45.9 11.1 50 350-401 179-241 (314)
119 4e2x_A TCAB9; kijanose, tetron 93.0 0.6 2E-05 47.0 11.4 42 196-240 96-137 (416)
120 3e23_A Uncharacterized protein 92.8 0.25 8.5E-06 44.5 7.4 42 194-240 32-73 (211)
121 2pxx_A Uncharacterized protein 92.7 0.84 2.9E-05 40.6 10.9 46 192-240 28-73 (215)
122 2b3t_A Protein methyltransfera 92.6 0.53 1.8E-05 44.6 9.9 41 198-240 101-141 (276)
123 3bkw_A MLL3908 protein, S-aden 92.5 0.55 1.9E-05 42.9 9.5 42 197-240 33-74 (243)
124 1vl5_A Unknown conserved prote 92.4 0.84 2.9E-05 42.4 10.9 43 195-240 25-67 (260)
125 3hnr_A Probable methyltransfer 92.4 1.4 4.9E-05 39.5 12.1 43 195-240 33-75 (220)
126 1xj5_A Spermidine synthase 1; 92.2 0.49 1.7E-05 47.0 9.4 44 195-240 109-152 (334)
127 2igt_A SAM dependent methyltra 92.2 1.5 5.1E-05 43.3 12.9 70 350-421 223-311 (332)
128 3bus_A REBM, methyltransferase 92.2 0.98 3.4E-05 42.2 11.1 43 196-240 50-92 (273)
129 3k6r_A Putative transferase PH 91.9 0.18 6.1E-06 49.0 5.6 37 350-387 190-226 (278)
130 3ocj_A Putative exported prote 91.9 0.055 1.9E-06 52.4 1.9 64 176-240 87-151 (305)
131 1vlm_A SAM-dependent methyltra 91.8 0.71 2.4E-05 41.9 9.3 87 351-439 101-213 (219)
132 2o57_A Putative sarcosine dime 91.8 0.63 2.2E-05 44.2 9.3 44 195-240 66-113 (297)
133 3bzb_A Uncharacterized protein 91.6 1.1 3.7E-05 42.9 10.7 40 199-240 71-110 (281)
134 3l8d_A Methyltransferase; stru 91.5 2.4 8.2E-05 38.5 12.7 42 194-240 42-83 (242)
135 3ou2_A SAM-dependent methyltra 91.4 0.34 1.2E-05 43.4 6.5 42 196-240 34-76 (218)
136 4htf_A S-adenosylmethionine-de 91.2 0.53 1.8E-05 44.5 8.1 41 196-240 58-98 (285)
137 3jwh_A HEN1; methyltransferase 91.0 1.3 4.3E-05 40.0 10.1 47 190-240 15-61 (217)
138 1jsx_A Glucose-inhibited divis 91.0 0.29 1E-05 43.8 5.7 33 207-240 65-97 (207)
139 2ift_A Putative methylase HI07 90.9 0.25 8.6E-06 44.7 5.2 32 207-240 53-84 (201)
140 2qfm_A Spermine synthase; sper 90.9 1.1 3.9E-05 45.0 10.4 59 350-410 265-339 (364)
141 3dou_A Ribosomal RNA large sub 90.8 2.4 8.1E-05 38.1 11.7 42 197-241 14-56 (191)
142 1xxl_A YCGJ protein; structura 90.8 1 3.4E-05 41.5 9.4 43 195-240 9-51 (239)
143 2xvm_A Tellurite resistance pr 90.7 0.36 1.2E-05 42.6 5.9 41 197-240 22-62 (199)
144 2b78_A Hypothetical protein SM 90.5 0.9 3.1E-05 45.7 9.4 34 206-241 211-244 (385)
145 4fzv_A Putative methyltransfer 90.3 0.76 2.6E-05 46.2 8.6 38 202-240 143-180 (359)
146 3h2b_A SAM-dependent methyltra 90.3 0.88 3E-05 40.4 8.2 39 351-389 101-144 (203)
147 1ri5_A MRNA capping enzyme; me 90.1 0.53 1.8E-05 44.4 6.9 47 351-397 132-185 (298)
148 2aot_A HMT, histamine N-methyl 90.1 1.2 4.1E-05 42.4 9.5 37 350-386 133-172 (292)
149 3cgg_A SAM-dependent methyltra 90.0 0.29 1E-05 42.8 4.7 33 205-240 44-76 (195)
150 1p91_A Ribosomal RNA large sub 89.5 0.38 1.3E-05 45.1 5.3 34 206-240 84-117 (269)
151 3jwg_A HEN1, methyltransferase 89.3 1.9 6.4E-05 38.8 9.8 44 196-240 18-61 (219)
152 1wxx_A TT1595, hypothetical pr 89.3 0.69 2.4E-05 46.4 7.4 83 350-440 277-376 (382)
153 2as0_A Hypothetical protein PH 89.1 0.65 2.2E-05 46.7 7.0 33 206-240 216-248 (396)
154 1nv8_A HEMK protein; class I a 89.1 0.85 2.9E-05 43.9 7.6 40 199-240 115-154 (284)
155 3thr_A Glycine N-methyltransfe 89.0 0.96 3.3E-05 42.8 7.8 47 349-395 127-184 (293)
156 3ege_A Putative methyltransfer 89.0 4 0.00014 37.9 12.1 45 193-240 20-64 (261)
157 3uwp_A Histone-lysine N-methyl 88.9 1.5 5.2E-05 45.1 9.6 50 191-241 157-206 (438)
158 3m33_A Uncharacterized protein 88.9 0.32 1.1E-05 44.6 4.2 58 351-413 110-167 (226)
159 3hp7_A Hemolysin, putative; st 88.7 2.8 9.7E-05 40.8 11.1 45 196-242 73-118 (291)
160 1ws6_A Methyltransferase; stru 88.7 0.84 2.9E-05 39.1 6.6 41 352-392 110-153 (171)
161 3cc8_A Putative methyltransfer 88.7 2.2 7.7E-05 38.1 9.8 40 197-240 23-62 (230)
162 2fpo_A Methylase YHHF; structu 88.6 0.66 2.3E-05 41.9 6.1 32 207-240 54-85 (202)
163 2yqz_A Hypothetical protein TT 88.4 0.97 3.3E-05 41.7 7.2 36 202-240 34-69 (263)
164 3iv6_A Putative Zn-dependent a 88.4 1.2 4.2E-05 42.6 8.1 44 194-240 32-75 (261)
165 4dmg_A Putative uncharacterize 88.3 1.7 5.8E-05 44.0 9.5 34 204-240 211-244 (393)
166 2p7i_A Hypothetical protein; p 88.2 1.2 4.1E-05 40.4 7.6 40 351-390 102-145 (250)
167 3lcc_A Putative methyl chlorid 88.1 0.9 3.1E-05 41.5 6.7 42 195-240 55-96 (235)
168 3uko_A Alcohol dehydrogenase c 88.1 3.6 0.00012 40.8 11.7 41 199-240 185-226 (378)
169 1zx0_A Guanidinoacetate N-meth 88.0 0.52 1.8E-05 43.4 5.1 34 205-240 58-91 (236)
170 3s2e_A Zinc-containing alcohol 88.0 2.9 0.0001 40.7 10.8 41 198-240 157-198 (340)
171 2pjd_A Ribosomal RNA small sub 87.9 0.76 2.6E-05 45.3 6.5 44 196-240 185-228 (343)
172 3dtn_A Putative methyltransfer 87.9 0.64 2.2E-05 42.4 5.6 44 196-240 32-76 (234)
173 3c0k_A UPF0064 protein YCCW; P 87.8 3.1 0.00011 41.7 11.1 33 206-240 219-251 (396)
174 1wy7_A Hypothetical protein PH 87.6 11 0.00036 33.3 13.6 35 204-240 46-80 (207)
175 3sm3_A SAM-dependent methyltra 87.5 2.3 7.8E-05 38.2 9.1 33 205-240 28-60 (235)
176 3axs_A Probable N(2),N(2)-dime 87.3 1.2 4E-05 45.3 7.6 35 206-240 51-85 (392)
177 3opn_A Putative hemolysin; str 87.1 4.1 0.00014 37.9 10.8 45 196-242 25-70 (232)
178 2kw5_A SLR1183 protein; struct 87.0 6 0.0002 34.8 11.4 39 351-389 93-134 (202)
179 1cdo_A Alcohol dehydrogenase; 86.9 5.1 0.00018 39.5 12.0 39 201-240 186-225 (374)
180 1xtp_A LMAJ004091AAA; SGPP, st 86.8 1.7 5.9E-05 39.8 7.9 49 190-240 76-124 (254)
181 2qy6_A UPF0209 protein YFCK; s 86.8 1 3.5E-05 43.0 6.5 37 352-388 173-215 (257)
182 3o4f_A Spermidine synthase; am 86.8 1.6 5.6E-05 42.6 8.0 49 351-401 156-217 (294)
183 1f8f_A Benzyl alcohol dehydrog 86.7 3 0.0001 41.2 10.2 39 201-240 184-223 (371)
184 3r0q_C Probable protein argini 86.7 0.62 2.1E-05 46.7 5.1 42 198-241 54-95 (376)
185 2fzw_A Alcohol dehydrogenase c 86.7 4.6 0.00016 39.8 11.6 39 201-240 184-223 (373)
186 2p41_A Type II methyltransfera 86.5 2.4 8.3E-05 41.3 9.1 41 196-240 71-111 (305)
187 1p0f_A NADP-dependent alcohol 86.5 5.3 0.00018 39.4 11.8 39 201-240 185-224 (373)
188 1wzn_A SAM-dependent methyltra 86.4 0.71 2.4E-05 42.6 5.0 45 193-240 27-71 (252)
189 3tm4_A TRNA (guanine N2-)-meth 86.4 1.8 6.1E-05 43.3 8.3 49 190-240 201-249 (373)
190 1y8c_A S-adenosylmethionine-de 86.3 1.2 4.1E-05 40.5 6.5 32 206-240 36-67 (246)
191 3m70_A Tellurite resistance pr 86.2 0.59 2E-05 44.2 4.5 39 199-240 112-150 (286)
192 2wa2_A Non-structural protein 86.2 1.3 4.5E-05 42.6 6.9 42 196-241 71-112 (276)
193 2i62_A Nicotinamide N-methyltr 86.1 1.2 4.2E-05 41.1 6.5 43 195-240 45-87 (265)
194 3g07_A 7SK snRNA methylphospha 85.7 0.6 2.1E-05 44.8 4.2 35 205-240 44-78 (292)
195 1e3i_A Alcohol dehydrogenase, 85.6 6.3 0.00022 38.9 11.9 39 201-240 189-228 (376)
196 2gb4_A Thiopurine S-methyltran 85.5 0.83 2.8E-05 43.2 5.1 35 203-240 64-98 (252)
197 3gru_A Dimethyladenosine trans 85.4 1.2 4.2E-05 43.4 6.3 45 194-241 37-81 (295)
198 2yx1_A Hypothetical protein MJ 85.3 0.53 1.8E-05 46.5 3.7 48 351-400 257-304 (336)
199 2dph_A Formaldehyde dismutase; 85.3 4 0.00014 40.8 10.3 42 198-240 176-218 (398)
200 3ggd_A SAM-dependent methyltra 85.2 5.1 0.00018 36.5 10.3 34 204-240 53-86 (245)
201 1pl8_A Human sorbitol dehydrog 85.2 7.3 0.00025 38.1 12.1 40 200-240 164-204 (356)
202 2jhf_A Alcohol dehydrogenase E 85.1 6.6 0.00022 38.7 11.7 39 201-240 185-224 (374)
203 3d2l_A SAM-dependent methyltra 85.0 0.39 1.3E-05 43.9 2.4 38 197-240 25-62 (243)
204 3cvo_A Methyltransferase-like 84.9 0.63 2.2E-05 43.0 3.8 32 351-384 121-152 (202)
205 1e3j_A NADP(H)-dependent ketos 84.8 7.5 0.00025 38.0 11.9 39 199-239 160-199 (352)
206 3uog_A Alcohol dehydrogenase; 84.5 2.7 9.3E-05 41.5 8.5 38 201-240 183-221 (363)
207 3ofk_A Nodulation protein S; N 84.3 2.8 9.5E-05 37.5 7.9 39 199-240 43-81 (216)
208 3gdh_A Trimethylguanosine synt 84.2 1.6 5.6E-05 39.9 6.3 34 204-240 75-108 (241)
209 2r3s_A Uncharacterized protein 83.9 2.6 8.9E-05 40.6 8.0 44 196-240 152-197 (335)
210 2dul_A N(2),N(2)-dimethylguano 83.3 3.8 0.00013 41.2 9.1 33 207-240 47-79 (378)
211 4dvj_A Putative zinc-dependent 83.3 6 0.00021 39.0 10.5 39 201-240 160-205 (363)
212 3uzu_A Ribosomal RNA small sub 82.9 1.6 5.4E-05 42.1 5.8 48 194-241 29-77 (279)
213 3fpc_A NADP-dependent alcohol 82.8 4.6 0.00016 39.5 9.4 42 198-240 157-199 (352)
214 3dmg_A Probable ribosomal RNA 82.7 2 6.7E-05 43.3 6.7 33 205-240 231-263 (381)
215 2avn_A Ubiquinone/menaquinone 82.5 3.3 0.00011 38.5 7.8 40 351-390 113-156 (260)
216 1o9g_A RRNA methyltransferase; 82.0 1.7 5.8E-05 40.3 5.5 48 193-240 37-85 (250)
217 4ej6_A Putative zinc-binding d 81.8 4.1 0.00014 40.3 8.6 40 200-240 175-215 (370)
218 3ip1_A Alcohol dehydrogenase, 81.8 9.2 0.00031 38.2 11.3 36 203-239 209-245 (404)
219 3bkx_A SAM-dependent methyltra 81.6 2.3 7.8E-05 39.6 6.3 47 196-242 32-78 (275)
220 1kol_A Formaldehyde dehydrogen 81.4 8.1 0.00028 38.4 10.7 42 198-240 176-218 (398)
221 2wk1_A NOVP; transferase, O-me 81.3 3.1 0.00011 40.2 7.3 52 350-402 207-261 (282)
222 3jv7_A ADH-A; dehydrogenase, n 81.0 7.9 0.00027 37.6 10.3 37 203-240 167-204 (345)
223 2hcy_A Alcohol dehydrogenase 1 80.4 8.1 0.00028 37.6 10.1 41 198-240 160-202 (347)
224 1ve3_A Hypothetical protein PH 79.9 7.8 0.00027 34.5 9.1 39 351-389 102-145 (227)
225 4a2c_A Galactitol-1-phosphate 79.4 25 0.00085 33.8 13.3 42 197-239 150-192 (346)
226 3m6i_A L-arabinitol 4-dehydrog 79.3 3 0.0001 41.0 6.6 41 199-240 171-212 (363)
227 2ex4_A Adrenal gland protein A 79.3 2.2 7.5E-05 39.1 5.2 34 205-240 77-110 (241)
228 3jyn_A Quinone oxidoreductase; 79.0 6.1 0.00021 38.2 8.6 38 201-240 134-173 (325)
229 3gms_A Putative NADPH:quinone 78.6 7.6 0.00026 37.7 9.2 38 201-240 138-177 (340)
230 1uwv_A 23S rRNA (uracil-5-)-me 78.4 4.3 0.00015 41.4 7.6 43 195-240 274-316 (433)
231 4b7c_A Probable oxidoreductase 78.3 9.6 0.00033 36.8 9.8 38 201-240 143-182 (336)
232 3g2m_A PCZA361.24; SAM-depende 78.0 2.1 7.1E-05 40.8 4.8 42 351-392 149-196 (299)
233 4hg2_A Methyltransferase type 78.0 8.8 0.0003 36.2 9.2 37 350-386 97-135 (257)
234 1rjw_A ADH-HT, alcohol dehydro 78.0 12 0.00041 36.3 10.5 41 198-240 155-196 (339)
235 3tqs_A Ribosomal RNA small sub 78.0 1.8 6.3E-05 41.1 4.4 44 194-240 16-59 (255)
236 3bxo_A N,N-dimethyltransferase 77.8 2.4 8.4E-05 38.3 5.1 32 206-240 39-70 (239)
237 3qwb_A Probable quinone oxidor 77.8 7.5 0.00026 37.6 8.9 38 201-240 142-181 (334)
238 1qam_A ERMC' methyltransferase 77.7 3.9 0.00013 38.1 6.5 45 193-240 16-60 (244)
239 1uuf_A YAHK, zinc-type alcohol 77.6 4.5 0.00015 40.1 7.4 41 198-240 185-226 (369)
240 4eez_A Alcohol dehydrogenase 1 77.5 11 0.00036 36.6 9.9 42 198-240 154-196 (348)
241 3ftd_A Dimethyladenosine trans 77.3 2.3 7.8E-05 40.2 4.8 45 194-240 18-62 (249)
242 2zfu_A Nucleomethylin, cerebra 77.1 5.9 0.0002 35.3 7.4 58 351-409 114-175 (215)
243 1pqw_A Polyketide synthase; ro 77.0 10 0.00035 33.4 9.0 37 202-240 33-71 (198)
244 3fbg_A Putative arginate lyase 76.9 10 0.00035 36.9 9.6 38 201-240 138-183 (346)
245 2j3h_A NADP-dependent oxidored 76.8 10 0.00036 36.6 9.7 38 201-240 149-188 (345)
246 2dq4_A L-threonine 3-dehydroge 76.2 13 0.00045 36.0 10.2 41 198-240 155-197 (343)
247 4eye_A Probable oxidoreductase 76.1 4.1 0.00014 39.8 6.5 38 201-240 153-192 (342)
248 3fut_A Dimethyladenosine trans 75.8 3.6 0.00012 39.4 5.8 44 194-241 34-77 (271)
249 3lkz_A Non-structural protein 75.8 6.3 0.00022 38.6 7.4 47 196-243 83-129 (321)
250 1jvb_A NAD(H)-dependent alcoho 75.7 13 0.00045 36.1 10.1 41 198-240 161-204 (347)
251 1qyr_A KSGA, high level kasuga 75.4 3.2 0.00011 39.3 5.3 44 194-240 8-51 (252)
252 3mcz_A O-methyltransferase; ad 75.2 3.9 0.00013 39.8 6.0 42 198-240 169-211 (352)
253 1v3u_A Leukotriene B4 12- hydr 74.5 18 0.0006 34.8 10.6 38 201-240 139-178 (333)
254 4dup_A Quinone oxidoreductase; 74.2 8.9 0.00031 37.5 8.4 38 201-240 161-200 (353)
255 1vj0_A Alcohol dehydrogenase, 74.0 13 0.00043 36.9 9.5 42 198-240 185-228 (380)
256 1x19_A CRTF-related protein; m 74.0 9.5 0.00032 37.3 8.5 45 195-240 178-222 (359)
257 3bt7_A TRNA (uracil-5-)-methyl 73.9 16 0.00054 36.2 10.2 41 196-240 203-243 (369)
258 2h6e_A ADH-4, D-arabinose 1-de 73.4 11 0.00039 36.5 8.9 34 204-240 168-204 (344)
259 2c0c_A Zinc binding alcohol de 73.2 14 0.00048 36.3 9.6 38 201-240 157-196 (362)
260 3bgv_A MRNA CAP guanine-N7 met 72.8 8.3 0.00028 36.8 7.6 45 351-395 113-164 (313)
261 3pfg_A N-methyltransferase; N, 72.2 1.8 6.2E-05 40.2 2.6 33 205-240 48-80 (263)
262 2p8j_A S-adenosylmethionine-de 71.0 9.2 0.00031 33.6 7.0 35 204-240 20-54 (209)
263 3lst_A CALO1 methyltransferase 70.9 11 0.00038 36.7 8.2 42 196-238 173-214 (348)
264 3gaz_A Alcohol dehydrogenase s 70.6 15 0.00051 35.7 9.0 36 201-238 144-181 (343)
265 3gwz_A MMCR; methyltransferase 70.5 7.3 0.00025 38.5 6.8 43 196-239 191-233 (369)
266 1qor_A Quinone oxidoreductase; 70.0 15 0.00052 35.2 8.8 37 202-240 135-173 (327)
267 2d8a_A PH0655, probable L-thre 69.8 21 0.00071 34.6 9.9 40 199-240 160-200 (348)
268 3v97_A Ribosomal RNA large sub 68.9 12 0.00041 40.7 8.6 34 205-240 537-570 (703)
269 2vn8_A Reticulon-4-interacting 68.6 22 0.00076 34.9 9.9 38 351-390 247-284 (375)
270 3p8z_A Mtase, non-structural p 68.6 48 0.0017 31.5 11.4 47 196-243 67-113 (267)
271 2gs9_A Hypothetical protein TT 68.4 26 0.00089 30.7 9.5 40 351-390 94-136 (211)
272 2ip2_A Probable phenazine-spec 68.3 15 0.00052 35.2 8.5 43 196-240 157-199 (334)
273 2ld4_A Anamorsin; methyltransf 67.6 4.9 0.00017 34.7 4.3 60 350-412 61-133 (176)
274 3sso_A Methyltransferase; macr 67.3 14 0.00049 37.6 8.2 71 170-242 181-257 (419)
275 3htx_A HEN1; HEN1, small RNA m 66.9 15 0.00051 41.1 8.7 45 196-240 710-754 (950)
276 1yb5_A Quinone oxidoreductase; 66.6 28 0.00097 33.9 10.1 37 202-240 165-203 (351)
277 2j8z_A Quinone oxidoreductase; 66.3 15 0.00053 35.8 8.1 38 201-240 156-195 (354)
278 1yub_A Ermam, rRNA methyltrans 65.6 4 0.00014 37.8 3.5 44 195-241 17-60 (245)
279 2g72_A Phenylethanolamine N-me 65.6 6.7 0.00023 36.9 5.1 35 351-385 173-214 (289)
280 1zq9_A Probable dimethyladenos 65.4 9 0.00031 36.5 6.0 45 193-240 14-58 (285)
281 3dp7_A SAM-dependent methyltra 65.0 11 0.00039 37.0 6.9 33 206-239 178-210 (363)
282 1m6y_A S-adenosyl-methyltransf 64.3 6.5 0.00022 38.2 4.8 45 195-240 14-58 (301)
283 1wly_A CAAR, 2-haloacrylate re 63.2 24 0.00081 34.0 8.7 37 202-240 140-178 (333)
284 3gqv_A Enoyl reductase; medium 62.1 33 0.0011 33.6 9.7 31 206-238 163-195 (371)
285 3tka_A Ribosomal RNA small sub 61.7 6.7 0.00023 39.1 4.3 45 196-240 46-90 (347)
286 3c6k_A Spermine synthase; sper 61.6 95 0.0032 31.2 12.9 33 206-240 204-236 (381)
287 2cdc_A Glucose dehydrogenase g 60.9 27 0.00091 34.2 8.7 37 202-240 166-212 (366)
288 3pi7_A NADH oxidoreductase; gr 60.2 17 0.00059 35.3 7.1 33 350-386 231-263 (349)
289 2h1r_A Dimethyladenosine trans 59.3 8.1 0.00028 37.2 4.5 44 194-240 29-72 (299)
290 1iz0_A Quinone oxidoreductase; 59.2 23 0.0008 33.5 7.8 36 202-240 121-158 (302)
291 3krt_A Crotonyl COA reductase; 58.9 18 0.00061 36.7 7.2 35 203-239 224-260 (456)
292 3i53_A O-methyltransferase; CO 58.8 7.4 0.00025 37.6 4.1 40 198-238 160-199 (332)
293 2fyt_A Protein arginine N-meth 58.3 13 0.00043 36.4 5.8 48 192-241 48-96 (340)
294 3two_A Mannitol dehydrogenase; 57.1 21 0.00073 34.6 7.2 53 198-254 167-220 (348)
295 3goh_A Alcohol dehydrogenase, 56.9 18 0.00062 34.5 6.5 52 198-254 133-185 (315)
296 2zb4_A Prostaglandin reductase 55.6 55 0.0019 31.6 10.0 39 201-240 152-194 (357)
297 2eih_A Alcohol dehydrogenase; 54.3 33 0.0011 33.1 8.0 36 203-240 162-199 (343)
298 4a0s_A Octenoyl-COA reductase/ 54.0 52 0.0018 33.0 9.7 35 203-239 216-252 (447)
299 3slk_A Polyketide synthase ext 51.3 25 0.00085 38.8 7.2 35 202-238 340-376 (795)
300 2qe6_A Uncharacterized protein 51.0 1.6E+02 0.0054 27.4 13.0 39 351-389 156-199 (274)
301 3hix_A ALR3790 protein; rhodan 50.6 39 0.0013 26.7 6.6 43 368-411 41-83 (106)
302 2ih2_A Modification methylase 50.3 31 0.001 34.1 7.2 45 198-242 30-74 (421)
303 1pjz_A Thiopurine S-methyltran 49.5 19 0.00065 32.0 5.0 42 196-240 11-52 (203)
304 2b5w_A Glucose dehydrogenase; 49.4 33 0.0011 33.4 7.1 42 199-241 158-208 (357)
305 1ne2_A Hypothetical protein TA 49.1 24 0.00083 30.8 5.6 35 204-240 48-82 (200)
306 2vdw_A Vaccinia virus capping 49.0 27 0.00091 33.5 6.3 45 350-394 127-177 (302)
307 2y1w_A Histone-arginine methyl 47.8 23 0.00077 34.6 5.6 43 197-241 40-82 (348)
308 2jjq_A Uncharacterized RNA met 47.0 38 0.0013 34.3 7.4 33 205-240 288-320 (425)
309 4gqb_A Protein arginine N-meth 46.8 25 0.00086 37.8 6.2 81 161-241 303-394 (637)
310 1piw_A Hypothetical zinc-type 46.7 38 0.0013 32.9 7.1 53 198-254 170-223 (360)
311 3gk5_A Uncharacterized rhodane 46.0 34 0.0012 27.3 5.5 46 365-412 41-86 (108)
312 2jtq_A Phage shock protein E; 45.3 35 0.0012 25.7 5.3 46 365-411 25-72 (85)
313 1i4w_A Mitochondrial replicati 43.0 31 0.0011 34.3 5.7 47 194-241 39-91 (353)
314 3ilm_A ALR3790 protein; rhodan 40.9 1.2E+02 0.0041 25.3 8.5 41 371-412 48-88 (141)
315 2h00_A Methyltransferase 10 do 39.7 37 0.0013 30.9 5.4 33 207-240 65-97 (254)
316 1gmx_A GLPE protein; transfera 39.0 36 0.0012 26.9 4.6 45 365-410 44-88 (108)
317 3ldg_A Putative uncharacterize 38.9 75 0.0026 31.7 7.9 40 189-228 176-215 (384)
318 3q7e_A Protein arginine N-meth 38.7 18 0.00061 35.5 3.2 41 199-241 58-98 (349)
319 1g6q_1 HnRNP arginine N-methyl 38.4 22 0.00075 34.4 3.8 39 201-241 32-70 (328)
320 3foj_A Uncharacterized protein 38.0 25 0.00084 27.5 3.4 45 365-411 42-86 (100)
321 3p9c_A Caffeic acid O-methyltr 37.4 2.2E+02 0.0074 27.6 11.0 41 197-238 190-231 (364)
322 3ldu_A Putative methylase; str 37.0 75 0.0026 31.6 7.6 41 189-229 177-217 (385)
323 2pln_A HP1043, response regula 36.4 84 0.0029 24.9 6.7 45 342-390 52-97 (137)
324 2jgn_A DBX, DDX3, ATP-dependen 36.3 62 0.0021 28.3 6.2 50 353-402 20-69 (185)
325 2oxt_A Nucleoside-2'-O-methylt 34.9 35 0.0012 32.2 4.5 42 196-241 63-104 (265)
326 2kw0_A CCMH protein; oxidoredu 34.9 18 0.00062 28.9 2.0 40 99-139 28-69 (90)
327 3k0b_A Predicted N6-adenine-sp 34.3 79 0.0027 31.6 7.3 39 190-228 184-222 (393)
328 2hl7_A Cytochrome C-type bioge 34.2 19 0.00066 28.4 2.1 40 99-139 31-72 (84)
329 3lup_A DEGV family protein; PS 32.6 84 0.0029 30.0 6.8 86 104-220 116-210 (285)
330 1fp2_A Isoflavone O-methyltran 32.5 1.1E+02 0.0039 29.3 7.9 35 204-239 185-219 (352)
331 1h2b_A Alcohol dehydrogenase; 32.3 56 0.0019 31.7 5.7 36 203-240 182-219 (359)
332 2cf5_A Atccad5, CAD, cinnamyl 32.1 71 0.0024 30.9 6.4 41 198-240 170-212 (357)
333 3eod_A Protein HNR; response r 31.9 78 0.0027 24.7 5.7 48 343-391 42-91 (130)
334 3tqh_A Quinone oxidoreductase; 31.4 55 0.0019 31.1 5.4 39 199-239 144-184 (321)
335 3grc_A Sensor protein, kinase; 31.0 1.1E+02 0.0039 24.1 6.6 50 342-391 40-92 (140)
336 3eme_A Rhodanese-like domain p 30.9 33 0.0011 26.9 3.1 45 365-411 42-86 (103)
337 3utn_X Thiosulfate sulfurtrans 30.7 42 0.0014 32.9 4.4 47 192-239 97-146 (327)
338 3cg0_A Response regulator rece 29.0 1.1E+02 0.0037 24.1 6.1 47 343-391 45-94 (140)
339 3eul_A Possible nitrate/nitrit 29.0 1.1E+02 0.0036 24.8 6.2 49 342-391 51-101 (152)
340 3e9m_A Oxidoreductase, GFO/IDH 28.4 45 0.0015 32.1 4.1 53 348-403 63-118 (330)
341 1tq1_A AT5G66040, senescence-a 28.4 54 0.0018 26.9 4.1 45 366-411 69-113 (129)
342 2qr3_A Two-component system re 28.3 1.1E+02 0.0037 24.1 6.0 49 342-391 37-92 (140)
343 3uuw_A Putative oxidoreductase 28.1 39 0.0013 32.0 3.6 51 352-405 66-119 (308)
344 2qv0_A Protein MRKE; structura 27.5 1.5E+02 0.005 23.5 6.7 51 343-394 46-98 (143)
345 3kht_A Response regulator; PSI 27.4 1.5E+02 0.0052 23.5 6.8 50 342-391 41-93 (144)
346 3rc1_A Sugar 3-ketoreductase; 27.0 39 0.0013 32.9 3.5 53 348-403 85-140 (350)
347 2zay_A Response regulator rece 26.8 1.3E+02 0.0043 24.0 6.2 49 343-391 43-94 (147)
348 3cnb_A DNA-binding response re 26.8 1.4E+02 0.0048 23.4 6.4 49 343-391 45-96 (143)
349 1q5x_A Regulator of RNAse E ac 26.7 1.4E+02 0.0047 26.0 6.7 49 204-256 53-108 (161)
350 3gt7_A Sensor protein; structu 26.7 2.4E+02 0.0083 22.7 8.1 50 342-391 41-93 (154)
351 2vz8_A Fatty acid synthase; tr 26.5 1.3E+02 0.0044 37.7 8.5 37 201-239 1661-1699(2512)
352 3hv2_A Response regulator/HD d 26.2 1.2E+02 0.0041 24.5 6.0 49 342-391 48-98 (153)
353 1zgz_A Torcad operon transcrip 26.2 1.6E+02 0.0053 22.5 6.5 47 343-391 37-85 (122)
354 1nxj_A Probable S-adenosylmeth 25.9 93 0.0032 27.9 5.4 46 207-256 85-137 (183)
355 3evn_A Oxidoreductase, GFO/IDH 25.9 48 0.0017 31.8 3.9 53 348-403 63-118 (329)
356 3hdg_A Uncharacterized protein 25.9 1.4E+02 0.0047 23.4 6.2 48 343-391 42-91 (137)
357 4a27_A Synaptic vesicle membra 25.8 40 0.0014 32.6 3.2 38 201-239 136-175 (349)
358 1yqd_A Sinapyl alcohol dehydro 25.5 98 0.0034 30.1 6.1 41 198-240 177-219 (366)
359 1ekj_A Beta-carbonic anhydrase 25.4 75 0.0026 29.2 4.9 97 126-225 7-122 (221)
360 4e7p_A Response regulator; DNA 25.3 1.9E+02 0.0064 23.2 7.0 49 342-391 56-106 (150)
361 3jte_A Response regulator rece 25.2 2.1E+02 0.0073 22.4 7.3 48 343-391 38-89 (143)
362 2qxy_A Response regulator; reg 25.2 1.3E+02 0.0046 23.7 6.0 49 342-391 38-87 (142)
363 2a14_A Indolethylamine N-methy 25.2 97 0.0033 28.4 5.7 85 351-445 155-261 (263)
364 3hn2_A 2-dehydropantoate 2-red 25.2 58 0.002 31.0 4.3 49 351-399 68-116 (312)
365 2py6_A Methyltransferase FKBM; 25.1 44 0.0015 33.6 3.5 38 204-241 223-261 (409)
366 1zsy_A Mitochondrial 2-enoyl t 24.8 56 0.0019 31.7 4.1 31 201-231 161-193 (357)
367 3k4i_A Uncharacterized protein 24.5 1.1E+02 0.0037 28.7 5.8 47 206-256 81-134 (244)
368 3b3j_A Histone-arginine methyl 24.2 88 0.003 32.1 5.6 40 199-240 150-189 (480)
369 3e18_A Oxidoreductase; dehydro 24.2 52 0.0018 32.1 3.8 52 348-402 61-115 (359)
370 1vi4_A Regulator of ribonuclea 24.2 1.6E+02 0.0056 26.0 6.7 48 205-256 57-111 (174)
371 3i42_A Response regulator rece 24.2 1.7E+02 0.0059 22.5 6.4 50 342-391 37-89 (127)
372 1dz3_A Stage 0 sporulation pro 24.0 1.3E+02 0.0046 23.3 5.7 49 343-391 39-89 (130)
373 3egl_A DEGV family protein; al 23.9 75 0.0026 30.2 4.7 88 102-220 93-188 (277)
374 3b2n_A Uncharacterized protein 23.9 2.1E+02 0.007 22.4 6.9 48 343-391 40-89 (133)
375 3ijw_A Aminoglycoside N3-acety 23.8 1.1E+02 0.0039 29.1 5.9 48 192-239 16-72 (268)
376 1pzx_A Hypothetical protein AP 23.8 70 0.0024 30.6 4.5 88 102-220 115-210 (289)
377 1dbw_A Transcriptional regulat 23.8 1.9E+02 0.0066 22.2 6.6 48 343-391 38-87 (126)
378 3n53_A Response regulator rece 23.6 1.1E+02 0.0039 24.1 5.3 49 342-390 36-87 (140)
379 2pcn_A S-adenosylmethionine:2- 23.5 1.2E+02 0.004 26.6 5.5 45 208-256 55-106 (161)
380 2j48_A Two-component sensor ki 23.3 1.6E+02 0.0055 21.8 5.9 49 343-391 36-87 (119)
381 3db2_A Putative NADPH-dependen 23.0 43 0.0015 32.4 2.9 52 348-402 62-116 (354)
382 2r25_B Osmosensing histidine p 23.0 1.7E+02 0.0059 23.0 6.2 41 351-391 51-93 (133)
383 1srr_A SPO0F, sporulation resp 22.9 1.7E+02 0.0056 22.5 6.0 47 343-390 38-86 (124)
384 2g1u_A Hypothetical protein TM 22.8 3.2E+02 0.011 22.5 9.5 36 203-240 14-50 (155)
385 1qkk_A DCTD, C4-dicarboxylate 22.6 1.4E+02 0.0047 24.2 5.7 48 343-391 38-87 (155)
386 4hkt_A Inositol 2-dehydrogenas 22.6 57 0.002 31.2 3.6 50 350-402 61-113 (331)
387 2rb4_A ATP-dependent RNA helic 22.5 1.2E+02 0.0042 25.7 5.5 34 368-402 24-57 (175)
388 3cz5_A Two-component response 22.4 1.6E+02 0.0056 23.6 6.1 47 343-390 42-90 (153)
389 4hc4_A Protein arginine N-meth 22.4 52 0.0018 32.9 3.3 49 191-241 66-115 (376)
390 2a9o_A Response regulator; ess 22.4 1.5E+02 0.0053 22.3 5.7 47 343-391 36-84 (120)
391 3f6c_A Positive transcription 22.3 1.6E+02 0.0053 22.9 5.8 48 343-391 37-86 (134)
392 2rjn_A Response regulator rece 22.2 1.8E+02 0.0062 23.3 6.4 47 343-390 42-90 (154)
393 1xhf_A DYE resistance, aerobic 22.2 1.8E+02 0.0061 22.2 6.0 47 343-391 38-86 (123)
394 3fhl_A Putative oxidoreductase 22.1 58 0.002 31.7 3.6 52 348-402 61-115 (362)
395 2hqr_A Putative transcriptiona 22.1 2E+02 0.0067 25.0 7.0 44 343-390 35-79 (223)
396 1xa0_A Putative NADPH dependen 22.0 84 0.0029 29.8 4.7 37 202-240 143-182 (328)
397 2oqr_A Sensory transduction pr 21.9 2.6E+02 0.0088 24.3 7.7 47 343-391 39-87 (230)
398 3fys_A Protein DEGV; fatty aci 21.8 1.2E+02 0.0042 29.3 5.9 106 103-240 145-268 (315)
399 1tlt_A Putative oxidoreductase 21.8 74 0.0025 30.2 4.3 52 350-404 63-117 (319)
400 3mm4_A Histidine kinase homolo 21.7 2.6E+02 0.009 24.2 7.7 38 352-389 119-161 (206)
401 3h5i_A Response regulator/sens 21.6 2.1E+02 0.0072 22.5 6.6 46 343-390 40-89 (140)
402 3a10_A Response regulator; pho 21.6 2.3E+02 0.0078 21.2 6.5 47 343-390 36-84 (116)
403 3hzh_A Chemotaxis response reg 21.5 2.4E+02 0.0082 22.8 7.1 49 342-391 71-123 (157)
404 1qzz_A RDMB, aclacinomycin-10- 21.5 1.2E+02 0.0042 29.1 5.8 43 196-239 171-213 (374)
405 2glx_A 1,5-anhydro-D-fructose 21.4 1.1E+02 0.0038 28.9 5.5 48 351-401 61-111 (332)
406 3t6k_A Response regulator rece 21.3 2.3E+02 0.0078 22.3 6.7 49 343-391 39-90 (136)
407 3c8o_A Regulator of ribonuclea 21.3 1.7E+02 0.0059 25.5 6.2 47 206-256 55-108 (162)
408 1wg8_A Predicted S-adenosylmet 21.2 84 0.0029 30.3 4.4 42 196-240 11-52 (285)
409 1kgs_A DRRD, DNA binding respo 21.1 2.2E+02 0.0074 24.6 7.0 47 343-390 37-85 (225)
410 1tt7_A YHFP; alcohol dehydroge 21.0 1.2E+02 0.0039 28.8 5.5 37 202-240 144-183 (330)
411 2nyg_A YOKD protein; PFAM02522 21.0 1.4E+02 0.0047 28.5 5.9 48 191-238 13-69 (273)
412 1g6u_A Domain swapped dimer; d 20.9 70 0.0024 21.5 2.6 18 116-133 6-23 (48)
413 3moi_A Probable dehydrogenase; 20.8 1.3E+02 0.0044 29.5 5.9 52 347-401 59-113 (387)
414 3q2i_A Dehydrogenase; rossmann 20.6 1.2E+02 0.0042 29.1 5.6 51 348-401 71-124 (354)
415 2rdm_A Response regulator rece 20.5 2.3E+02 0.008 21.7 6.5 47 343-390 40-90 (132)
416 3i83_A 2-dehydropantoate 2-red 20.5 56 0.0019 31.3 3.1 41 352-392 71-111 (320)
417 2g7z_A Conserved hypothetical 20.5 79 0.0027 30.1 4.1 88 102-220 114-209 (282)
418 3hwr_A 2-dehydropantoate 2-red 20.3 89 0.003 29.8 4.5 43 351-393 85-127 (318)
419 3rqi_A Response regulator prot 20.1 1.7E+02 0.0059 24.6 6.0 48 343-391 42-91 (184)
420 3flh_A Uncharacterized protein 20.1 77 0.0026 25.7 3.5 39 365-403 57-97 (124)
No 1
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.95 E-value=6.6e-27 Score=224.75 Aligned_cols=253 Identities=16% Similarity=0.160 Sum_probs=195.3
Q ss_pred CccCCCEEEEEeCCCCeEEEEEEccCCEEEEcceeeecCCccCCCCCcEEEEeCCCCCCCccccCCCCcchhhhhhhhhc
Q 012978 16 LTWEGCSVLLDINDGDRLVFARLTSGSTLKIGNKNCSLQPLIGCPFGSLFQVDNGKEGPNLSRVIPSTEDDVQEKEDAQI 95 (452)
Q Consensus 16 ~i~eGd~Vll~~~~g~~~~~v~l~~~~~v~~gK~~f~~~~lIG~pyG~~fei~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 95 (452)
+|++||.|++..+.+ +.+.+++.+| .++..+|.|.++++||++||..+....+.
T Consensus 1 ~~~~Gd~v~~~~~~~-~~~~~~~~~~-~~~~~~g~~~~~~~ig~~~g~~i~~~~g~------------------------ 54 (255)
T 3mb5_A 1 MIREGDKVVLVDPRG-KRYLITVSKR-DFHTDLGILKLEEIIGRNFGEAIKSHKGH------------------------ 54 (255)
T ss_dssp CCCTTCEEEEECTTS-CEEEEECCSS-EEEETTEEEEGGGGTTCCTTCEEECTTCC------------------------
T ss_pred CCCCCCEEEEEECCC-cEEEEEecCC-eEecCCEEEEHHHhcCCCCCcEEEECCCc------------------------
Confidence 589999999999876 4558889988 88888899999999999999988754332
Q ss_pred cccccCccccccCcccccCCHHHHHHHHHcCCChHHHHHHHHhccccccccccccHHHHHHHhhhccCCcEEEeCCChHH
Q 012978 96 SGEFRDNRAIVDDNKAQCLSGEDIDEMRRQGATGEEIVEALIANSATFEKKTSFSQEKYKLKKQKKYAPKVLLRRPFARS 175 (452)
Q Consensus 96 ~~~~~dNr~i~Dd~~~QkLs~eeI~~lK~~g~sG~eII~~LvenS~tF~~KT~FSqeKYlkkK~kKy~~~~~i~~pt~~~ 175 (452)
.+.+++|+...
T Consensus 55 ---------------------------------------------------------------------~~~~~~p~~~~ 65 (255)
T 3mb5_A 55 ---------------------------------------------------------------------EFKILRPRIVD 65 (255)
T ss_dssp ---------------------------------------------------------------------EEEEECCCHHH
T ss_pred ---------------------------------------------------------------------EEEEeCCCHHH
Confidence 23455666554
Q ss_pred HHHHHHhcCcccccccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecCCCCCchhhhhhcCC
Q 012978 176 ICEAYFKKNPARIGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIGDSLYPMDIVRIFNF 255 (452)
Q Consensus 176 l~e~y~~Kdp~Ki~~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~~~~~~~~~~~~~nf 255 (452)
... ..+.....+.++..++|+.++++.+|.+||.++.++|.++.++++++|+.++|+.++..
T Consensus 66 ~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~-------------- 127 (255)
T 3mb5_A 66 YLD----KMKRGPQIVHPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIR-------------- 127 (255)
T ss_dssp HHH----HSCCCSCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSC--------------
T ss_pred HHh----hCccccccccHhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecC--------------
Confidence 333 33444456777888999999999999999999999999999999999988999988653
Q ss_pred CHHHHHhhhccccccccccCcCcccchhhhhhhhhhcccccccCCCCcccccccccccccchhhhhcCCCcccccccccc
Q 012978 256 SNEICKSIVRASVSDVTSQSETSEQSDQLESACNMEIQSNEQKSSSVSMEDISLSSENGVSDLILEANHSPVNKISKSHK 335 (452)
Q Consensus 256 ~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 335 (452)
++..+.+.. ++.... ...
T Consensus 128 -~~~~~~a~~-~~~~~~-~~~----------------------------------------------------------- 145 (255)
T 3mb5_A 128 -EDFAKLAWE-NIKWAG-FDD----------------------------------------------------------- 145 (255)
T ss_dssp -HHHHHHHHH-HHHHHT-CTT-----------------------------------------------------------
T ss_pred -HHHHHHHHH-HHHHcC-CCC-----------------------------------------------------------
Confidence 222222211 111100 000
Q ss_pred ccccchHHHHHHhhhcCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhccC-ccceeeeeee
Q 012978 336 VGEKASQETLKLWKENGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRKM-AIGLQISEPW 414 (452)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~~-~v~l~l~E~~ 414 (452)
+......+..+.+..+.||.++++.+ +|+.++..+...|+|+|.+++++|+.+++.++...|+..+. |..+++.|.+
T Consensus 146 ~v~~~~~d~~~~~~~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g~~f~~~~~~e~~ 223 (255)
T 3mb5_A 146 RVTIKLKDIYEGIEEENVDHVILDLP--QPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFKDYFMKPRTINVL 223 (255)
T ss_dssp TEEEECSCGGGCCCCCSEEEEEECSS--CGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTGGGBSCCEEECCC
T ss_pred ceEEEECchhhccCCCCcCEEEECCC--CHHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCccccEEEEEe
Confidence 00000001111122356998888765 89999999999999999999999999999999999997653 9999999999
Q ss_pred eeeeeecCCCCCCCCcccCceEEEEEEEEec
Q 012978 415 LREYQVLPSRTHPCMQMSGCGGYILSGTRTA 445 (452)
Q Consensus 415 lR~yQVLP~RTHP~m~m~~~~GyiLsg~kv~ 445 (452)
.|+|++.|.++||.++|.+|+|||++|+||.
T Consensus 224 ~r~~~~~~~~~rp~~~~~~htg~l~~ark~~ 254 (255)
T 3mb5_A 224 VFDQEVKKECMRPRTTALVHTGYITFARRIL 254 (255)
T ss_dssp CCCEEEETTEEEECSCCCCCSCEEEEEEBCC
T ss_pred eeeeEecCCccCCCcccccccEEEEEEEEec
Confidence 9999999999999999999999999999985
No 2
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.92 E-value=8.1e-24 Score=205.91 Aligned_cols=260 Identities=18% Similarity=0.235 Sum_probs=200.1
Q ss_pred CCCccCCCEEEEEeCCCCeEEEEEEccCCEEEEcceeeecCCccCCCCCcEEEEeCCCCCCCccccCCCCcchhhhhhhh
Q 012978 14 AQLTWEGCSVLLDINDGDRLVFARLTSGSTLKIGNKNCSLQPLIGCPFGSLFQVDNGKEGPNLSRVIPSTEDDVQEKEDA 93 (452)
Q Consensus 14 ~~~i~eGd~Vll~~~~g~~~~~v~l~~~~~v~~gK~~f~~~~lIG~pyG~~fei~~~~~~~~~~~~~~~~d~~~~~~~~~ 93 (452)
...|++||+|+|....|. .+++.+++|+.++..+|.+.++++||++||+++....+.
T Consensus 4 ~~~~~~Gd~v~~~~~~~~-~~~~~~~~g~~~~~~~g~~~~~~~ig~~~g~~v~~~~~~---------------------- 60 (280)
T 1i9g_A 4 TGPFSIGERVQLTDAKGR-RYTMSLTPGAEFHTHRGSIAHDAVIGLEQGSVVKSSNGA---------------------- 60 (280)
T ss_dssp CCSCCTTCEEEEEETTCC-EEEEECCTTCEEEETTEEEEHHHHTTCCTTEEEECSSCC----------------------
T ss_pred CCcCCCCCEEEEEECCCC-EEEEEECCCCeEEcCCceEEHHHhcCCCCceEEEecCCc----------------------
Confidence 346999999999998775 558889999999999999999999999999988744332
Q ss_pred hccccccCccccccCcccccCCHHHHHHHHHcCCChHHHHHHHHhccccccccccccHHHHHHHhhhccCCcEEEeCCCh
Q 012978 94 QISGEFRDNRAIVDDNKAQCLSGEDIDEMRRQGATGEEIVEALIANSATFEKKTSFSQEKYKLKKQKKYAPKVLLRRPFA 173 (452)
Q Consensus 94 ~~~~~~~dNr~i~Dd~~~QkLs~eeI~~lK~~g~sG~eII~~LvenS~tF~~KT~FSqeKYlkkK~kKy~~~~~i~~pt~ 173 (452)
.+.+++|+.
T Consensus 61 -----------------------------------------------------------------------~~~~~~p~~ 69 (280)
T 1i9g_A 61 -----------------------------------------------------------------------LFLVLRPLL 69 (280)
T ss_dssp -----------------------------------------------------------------------EEEEECCCH
T ss_pred -----------------------------------------------------------------------EEEEeCCCH
Confidence 234555554
Q ss_pred HHHHHHHHhcCcccccccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecCCCCCchhhhhhc
Q 012978 174 RSICEAYFKKNPARIGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIGDSLYPMDIVRIF 253 (452)
Q Consensus 174 ~~l~e~y~~Kdp~Ki~~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~~~~~~~~~~~~~ 253 (452)
. .|+...+.....+.+..+++|+.++++.+|.+||.++.++|.++.+++.++|+.+.|+.++...
T Consensus 70 ~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~----------- 134 (280)
T 1i9g_A 70 V----DYVMSMPRGPQVIYPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRA----------- 134 (280)
T ss_dssp H----HHHTTSCSCSCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCH-----------
T ss_pred H----HHHhhccccceeecHHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCH-----------
Confidence 3 3344455666677888899999999999999999999999999999999999888999887532
Q ss_pred CCCHHHHHhhhccccccc-cccCcCcccchhhhhhhhhhcccccccCCCCcccccccccccccchhhhhcCCCccccccc
Q 012978 254 NFSNEICKSIVRASVSDV-TSQSETSEQSDQLESACNMEIQSNEQKSSSVSMEDISLSSENGVSDLILEANHSPVNKISK 332 (452)
Q Consensus 254 nf~~~~~~~~~~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 332 (452)
+..+.+.. ++... ...... ..
T Consensus 135 ----~~~~~a~~-~~~~~~g~~~~~------------v~----------------------------------------- 156 (280)
T 1i9g_A 135 ----DHAEHARR-NVSGCYGQPPDN------------WR----------------------------------------- 156 (280)
T ss_dssp ----HHHHHHHH-HHHHHHTSCCTT------------EE-----------------------------------------
T ss_pred ----HHHHHHHH-HHHHhcCCCCCc------------EE-----------------------------------------
Confidence 22222111 11000 000000 00
Q ss_pred cccccccchHHHHH-HhhhcCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhccCccceeee
Q 012978 333 SHKVGEKASQETLK-LWKENGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRKMAIGLQIS 411 (452)
Q Consensus 333 ~~~~~~~~~~~~~~-~~~~~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~~~v~l~l~ 411 (452)
....++.+ .+..+.||.+++..+ +||.++..+...|+|+|.+++++|+.+++.++...|+....|..+++.
T Consensus 157 ------~~~~d~~~~~~~~~~~D~v~~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f~~~~~~ 228 (280)
T 1i9g_A 157 ------LVVSDLADSELPDGSVDRAVLDML--APWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWTEPRAW 228 (280)
T ss_dssp ------EECSCGGGCCCCTTCEEEEEEESS--CGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSBCCCEEE
T ss_pred ------EEECchHhcCCCCCceeEEEECCc--CHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCcCCcEEE
Confidence 00000000 011357999999875 899999999999999999999999999999999999976689999999
Q ss_pred eeeeeeeeecCCCCCCCCcccCceEEEEEEEEecCCC
Q 012978 412 EPWLREYQVLPSRTHPCMQMSGCGGYILSGTRTATNA 448 (452)
Q Consensus 412 E~~lR~yQVLP~RTHP~m~m~~~~GyiLsg~kv~~~~ 448 (452)
|.+.|.|++.+.++||...|.+|+|||++++|+.+..
T Consensus 229 ~~~~~~~~~~~~~~~p~~~~~~~~~~lv~~rk~~~~~ 265 (280)
T 1i9g_A 229 ETLQRGWNVVGLAVRPQHSMRGHTAFLVATRRLAPGA 265 (280)
T ss_dssp CCCCCCEEEETTEEEECSCCCCCSCEEEEEEBCCTTC
T ss_pred EEeeeEeEeccceeCCCCcccCccEEEEEEEecCCCC
Confidence 9999999999999999999999999999999986544
No 3
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.92 E-value=6.8e-24 Score=207.20 Aligned_cols=260 Identities=17% Similarity=0.233 Sum_probs=196.1
Q ss_pred CCCCCccCCCEEEEEeCCCCeEEEEEEccCCEEEEcceeeecCCccCCCCCcEEEEeCCCCCCCccccCCCCcchhhhhh
Q 012978 12 RNAQLTWEGCSVLLDINDGDRLVFARLTSGSTLKIGNKNCSLQPLIGCPFGSLFQVDNGKEGPNLSRVIPSTEDDVQEKE 91 (452)
Q Consensus 12 ~~~~~i~eGd~Vll~~~~g~~~~~v~l~~~~~v~~gK~~f~~~~lIG~pyG~~fei~~~~~~~~~~~~~~~~d~~~~~~~ 91 (452)
+....|++||.|+|...+|. .+.+++++|..++...|.+++++++|++||..|.+..+..
T Consensus 15 ~~~~~~~~gd~v~i~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~i~g~~~g~~~~~~~~~~------------------- 74 (277)
T 1o54_A 15 KVADTLKPGDRVLLSFEDES-EFLVDLEKDKKLHTHLGIIDLNEVFEKGPGEIIRTSAGKK------------------- 74 (277)
T ss_dssp CGGGCCCTTCEEEEEETTSC-EEEEECCTTCEEEETTEEEEHHHHTTSCTTCEEECTTCCE-------------------
T ss_pred cccCCCCCCCEEEEEECCCc-EEEEEEcCCCEEecCCceEEHHHhcCCCCCcEEEEcCCcE-------------------
Confidence 34458999999999999875 4478899999999999999999999999999888654432
Q ss_pred hhhccccccCccccccCcccccCCHHHHHHHHHcCCChHHHHHHHHhccccccccccccHHHHHHHhhhccCCcEEEeCC
Q 012978 92 DAQISGEFRDNRAIVDDNKAQCLSGEDIDEMRRQGATGEEIVEALIANSATFEKKTSFSQEKYKLKKQKKYAPKVLLRRP 171 (452)
Q Consensus 92 ~~~~~~~~~dNr~i~Dd~~~QkLs~eeI~~lK~~g~sG~eII~~LvenS~tF~~KT~FSqeKYlkkK~kKy~~~~~i~~p 171 (452)
+.+.+|
T Consensus 75 --------------------------------------------------------------------------~~~~~p 80 (277)
T 1o54_A 75 --------------------------------------------------------------------------GYILIP 80 (277)
T ss_dssp --------------------------------------------------------------------------EEEECC
T ss_pred --------------------------------------------------------------------------EEEeCC
Confidence 234444
Q ss_pred ChHHHHHHHHhcCcccccccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecCCCCCchhhhh
Q 012978 172 FARSICEAYFKKNPARIGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIGDSLYPMDIVR 251 (452)
Q Consensus 172 t~~~l~e~y~~Kdp~Ki~~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~~~~~~~~~~~ 251 (452)
+...+.+.+. .....+.+...++|+.++++.+|.+||.++.++|.++.+++.++|+.++|+.++...
T Consensus 81 ~~~~~~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~--------- 147 (277)
T 1o54_A 81 SLIDEIMNMK----RRTQIVYPKDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKRE--------- 147 (277)
T ss_dssp CHHHHHHTCC----C-CCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCH---------
T ss_pred CHHHHHhhcc----ccCCccCHHHHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCH---------
Confidence 4444333222 222345555679999999999999999999999999999999998888999887532
Q ss_pred hcCCCHHHHHhhhccccccccccCcCcccchhhhhhhhhhcccccccCCCCcccccccccccccchhhhhcCCCcccccc
Q 012978 252 IFNFSNEICKSIVRASVSDVTSQSETSEQSDQLESACNMEIQSNEQKSSSVSMEDISLSSENGVSDLILEANHSPVNKIS 331 (452)
Q Consensus 252 ~~nf~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (452)
+..+.+.. ++.... ..+.
T Consensus 148 ------~~~~~a~~-~~~~~~------------------------------------------~~~~------------- 165 (277)
T 1o54_A 148 ------EFAKLAES-NLTKWG------------------------------------------LIER------------- 165 (277)
T ss_dssp ------HHHHHHHH-HHHHTT------------------------------------------CGGG-------------
T ss_pred ------HHHHHHHH-HHHHcC------------------------------------------CCCC-------------
Confidence 22222211 111100 0000
Q ss_pred ccccccccchHHHHHHhhhcCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhccCccceeee
Q 012978 332 KSHKVGEKASQETLKLWKENGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRKMAIGLQIS 411 (452)
Q Consensus 332 k~~~~~~~~~~~~~~~~~~~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~~~v~l~l~ 411 (452)
......+..+.+..+.||.++++.+ +||.++..+...|+|+|.+++++|+.+++.++...|+. .+|..+++.
T Consensus 166 -----v~~~~~d~~~~~~~~~~D~V~~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~-~gf~~~~~~ 237 (277)
T 1o54_A 166 -----VTIKVRDISEGFDEKDVDALFLDVP--DPWNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQE-LPFIRIEVW 237 (277)
T ss_dssp -----EEEECCCGGGCCSCCSEEEEEECCS--CGGGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHH-SSEEEEEEE
T ss_pred -----EEEEECCHHHcccCCccCEEEECCc--CHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHH-CCCceeEEE
Confidence 0000000001122357998888765 89999999999999999999999999999999999987 569999999
Q ss_pred eeeeeeeeecCCCCCCCCcccCceEEEEEEEEecCCC
Q 012978 412 EPWLREYQVLPSRTHPCMQMSGCGGYILSGTRTATNA 448 (452)
Q Consensus 412 E~~lR~yQVLP~RTHP~m~m~~~~GyiLsg~kv~~~~ 448 (452)
|.+.|.|++.+.++||...|.+|+|||++|+|+.+..
T Consensus 238 ~~~~~~~~~~~~~~rp~~~~~~~~~~li~ark~~~~~ 274 (277)
T 1o54_A 238 ESLFRPYKPVPERLRPVDRMVAHTAYMIFATKVCRRE 274 (277)
T ss_dssp CCCCCCEECCTTSCEECSCCCCCSCEEEEEEECSCSC
T ss_pred EEeeeeeEeccceeCCCccccCCCeEEEEEEecCCCC
Confidence 9999999999999999999999999999999987654
No 4
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.90 E-value=1.9e-23 Score=200.20 Aligned_cols=255 Identities=15% Similarity=0.140 Sum_probs=190.1
Q ss_pred CCccCCCEEEEEeCCCCeEEEEEEccCCEEEEcceeeecCCccCCCCCcEEEEeCCCCCCCccccCCCCcchhhhhhhhh
Q 012978 15 QLTWEGCSVLLDINDGDRLVFARLTSGSTLKIGNKNCSLQPLIGCPFGSLFQVDNGKEGPNLSRVIPSTEDDVQEKEDAQ 94 (452)
Q Consensus 15 ~~i~eGd~Vll~~~~g~~~~~v~l~~~~~v~~gK~~f~~~~lIG~pyG~~fei~~~~~~~~~~~~~~~~d~~~~~~~~~~ 94 (452)
..|++||+|+|..++|. .+.+++++|+.++...|.+.+++++|.+||.++....+..
T Consensus 2 ~~~~~Gd~v~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~~g~~---------------------- 58 (258)
T 2pwy_A 2 SHMAWPGPLLLKDRKGR-AYLVFPKEGGVFHHHKGSVPHEALLEAGPGGVVRTHLGEE---------------------- 58 (258)
T ss_dssp ------CCEEEECTTCC-EEEECCCTTCEECCTTCCEEHHHHHHHCTTCEEECSTTCE----------------------
T ss_pred CCCCCCCEEEEEECCCc-EEEEEecCCCEEecCCceEEHHHhcCCCCCcEEEeCCCcE----------------------
Confidence 56899999999998774 5577899999999999999999999999999887554432
Q ss_pred ccccccCccccccCcccccCCHHHHHHHHHcCCChHHHHHHHHhccccccccccccHHHHHHHhhhccCCcEEEeCCChH
Q 012978 95 ISGEFRDNRAIVDDNKAQCLSGEDIDEMRRQGATGEEIVEALIANSATFEKKTSFSQEKYKLKKQKKYAPKVLLRRPFAR 174 (452)
Q Consensus 95 ~~~~~~dNr~i~Dd~~~QkLs~eeI~~lK~~g~sG~eII~~LvenS~tF~~KT~FSqeKYlkkK~kKy~~~~~i~~pt~~ 174 (452)
+.+++|+..
T Consensus 59 -----------------------------------------------------------------------~~~~~~~~~ 67 (258)
T 2pwy_A 59 -----------------------------------------------------------------------LSVHRPTLE 67 (258)
T ss_dssp -----------------------------------------------------------------------EEEECCCHH
T ss_pred -----------------------------------------------------------------------EEEeCCCHH
Confidence 233344433
Q ss_pred HHHHHHHhcCcccccccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecCCCCCchhhhhhcC
Q 012978 175 SICEAYFKKNPARIGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIGDSLYPMDIVRIFN 254 (452)
Q Consensus 175 ~l~e~y~~Kdp~Ki~~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~~~~~~~~~~~~~n 254 (452)
.|+...+.....+.++.+++++.++++.+|.+||.++.+.|.++.+++.++|+.++|+.++...
T Consensus 68 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~------------ 131 (258)
T 2pwy_A 68 ----EYLLHMKRSATPTYPKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARP------------ 131 (258)
T ss_dssp ----HHHHHSCCSSCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCH------------
T ss_pred ----HHhhcCccccccccchHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCH------------
Confidence 2344455556667777789999999999999999999999999999999998888999887532
Q ss_pred CCHHHHHhhhccccccccccCcCcccchhhhhhhhhhcccccccCCCCcccccccccccccchhhhhcCCCccccccccc
Q 012978 255 FSNEICKSIVRASVSDVTSQSETSEQSDQLESACNMEIQSNEQKSSSVSMEDISLSSENGVSDLILEANHSPVNKISKSH 334 (452)
Q Consensus 255 f~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 334 (452)
+..+.+.. ++..... .. ..
T Consensus 132 ---~~~~~a~~-~~~~~~g--~~------------------------------------~v------------------- 150 (258)
T 2pwy_A 132 ---HHLAQAER-NVRAFWQ--VE------------------------------------NV------------------- 150 (258)
T ss_dssp ---HHHHHHHH-HHHHHCC--CC------------------------------------CE-------------------
T ss_pred ---HHHHHHHH-HHHHhcC--CC------------------------------------CE-------------------
Confidence 22222111 1100000 00 00
Q ss_pred cccccchHHHHHH-hhhcCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhccCccceeeeee
Q 012978 335 KVGEKASQETLKL-WKENGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRKMAIGLQISEP 413 (452)
Q Consensus 335 ~~~~~~~~~~~~~-~~~~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~~~v~l~l~E~ 413 (452)
.....+..+. +..+.||.++++.+ +|+.++..+...|+|+|.+++++|+.+++.++...|+. .+|..+++.|.
T Consensus 151 ---~~~~~d~~~~~~~~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~-~gf~~~~~~~~ 224 (258)
T 2pwy_A 151 ---RFHLGKLEEAELEEAAYDGVALDLM--EPWKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEA-HPFRLERVLEV 224 (258)
T ss_dssp ---EEEESCGGGCCCCTTCEEEEEEESS--CGGGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTT-TTEEEEEEEEE
T ss_pred ---EEEECchhhcCCCCCCcCEEEECCc--CHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHH-CCCceEEEEEe
Confidence 0000000000 22357999998865 89999999999999999999999999999999999987 57999999999
Q ss_pred eeeeeeecCCCCCCCCcccCceEEEEEEEEecC
Q 012978 414 WLREYQVLPSRTHPCMQMSGCGGYILSGTRTAT 446 (452)
Q Consensus 414 ~lR~yQVLP~RTHP~m~m~~~~GyiLsg~kv~~ 446 (452)
+.|+|++.+.++||...|.+|+|||++|+|+.+
T Consensus 225 ~~~~~~~~~~~~rp~~~~~~~~~~l~~ark~~~ 257 (258)
T 2pwy_A 225 GWREWEVRLPVAHPRFQQVGHTAFLVALRRWKG 257 (258)
T ss_dssp EEEEEEEETTEEEECSSCCCCCCEEEEEEECCC
T ss_pred eeeEeeeccCccCCCCccCCcceEEEEEEecCC
Confidence 999999999999999999999999999999864
No 5
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.86 E-value=6.1e-20 Score=174.69 Aligned_cols=244 Identities=18% Similarity=0.232 Sum_probs=179.4
Q ss_pred CccCCCEEEEEeCCCCeEEEEEEccCCEEEEcceeeecCCccCCCCCcEEEEeCCCCCCCccccCCCCcchhhhhhhhhc
Q 012978 16 LTWEGCSVLLDINDGDRLVFARLTSGSTLKIGNKNCSLQPLIGCPFGSLFQVDNGKEGPNLSRVIPSTEDDVQEKEDAQI 95 (452)
Q Consensus 16 ~i~eGd~Vll~~~~g~~~~~v~l~~~~~v~~gK~~f~~~~lIG~pyG~~fei~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 95 (452)
.+++||.|++.... ..+.+.+..|+.....+|.+.+.+++|.+||+.+ . .
T Consensus 3 ~~~~Gd~V~~~~~~--~~~~~~~~~g~~~~~~~G~~~~~~~~g~~~G~~~-----~--~--------------------- 52 (248)
T 2yvl_A 3 SFKEGEYVLIRFGE--KKFLRKLLPKQSLSVKKSVLKFDEVIGKPEGVKI-----N--G--------------------- 52 (248)
T ss_dssp CCCTTCEEEEEETT--EEEEEECCTTCEEEETTEEEEGGGTTTCCTTEEE-----T--T---------------------
T ss_pred cCCCCCEEEEEeCC--eEEEEEEcCCCEEecCCceEEHHHhcCCCCCCEE-----E--E---------------------
Confidence 58999999998764 5667788999999999999999999999999765 1 1
Q ss_pred cccccCccccccCcccccCCHHHHHHHHHcCCChHHHHHHHHhccccccccccccHHHHHHHhhhccCCcEEEeCCChHH
Q 012978 96 SGEFRDNRAIVDDNKAQCLSGEDIDEMRRQGATGEEIVEALIANSATFEKKTSFSQEKYKLKKQKKYAPKVLLRRPFARS 175 (452)
Q Consensus 96 ~~~~~dNr~i~Dd~~~QkLs~eeI~~lK~~g~sG~eII~~LvenS~tF~~KT~FSqeKYlkkK~kKy~~~~~i~~pt~~~ 175 (452)
+.+.+|+...
T Consensus 53 ----------------------------------------------------------------------~~~~~p~~~~ 62 (248)
T 2yvl_A 53 ----------------------------------------------------------------------FEVYRPTLEE 62 (248)
T ss_dssp ----------------------------------------------------------------------EEEECCCHHH
T ss_pred ----------------------------------------------------------------------EEEeCCCHHH
Confidence 1233444444
Q ss_pred HHHHHHhcCcccccccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecCCCCCchhhhhhcCC
Q 012978 176 ICEAYFKKNPARIGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIGDSLYPMDIVRIFNF 255 (452)
Q Consensus 176 l~e~y~~Kdp~Ki~~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~~~~~~~~~~~~~nf 255 (452)
+.+..+... ..-+.+...++++.++++.+|.+||+++.+.|.++.+++.+ .++|+.++..
T Consensus 63 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~-------------- 122 (248)
T 2yvl_A 63 IILLGFERK---TQIIYPKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAV-------------- 122 (248)
T ss_dssp HHHHTSCCS---SCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSC--------------
T ss_pred HHHhcCcCC---CCcccchhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecC--------------
Confidence 433332221 12344566789999999999999999999999999999998 4578777652
Q ss_pred CHHHHHhhhccccccccccCcCcccchhhhhhhhhhcccccccCCCCcccccccccccccchhhhhcCCCcccccccccc
Q 012978 256 SNEICKSIVRASVSDVTSQSETSEQSDQLESACNMEIQSNEQKSSSVSMEDISLSSENGVSDLILEANHSPVNKISKSHK 335 (452)
Q Consensus 256 ~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 335 (452)
++..+.+.. +..... ... .. ..
T Consensus 123 -~~~~~~a~~-~~~~~~-~~~-------------------------------------~~-~~----------------- 144 (248)
T 2yvl_A 123 -EEFYKTAQK-NLKKFN-LGK-------------------------------------NV-KF----------------- 144 (248)
T ss_dssp -HHHHHHHHH-HHHHTT-CCT-------------------------------------TE-EE-----------------
T ss_pred -HHHHHHHHH-HHHHcC-CCC-------------------------------------cE-EE-----------------
Confidence 122222111 111000 000 00 00
Q ss_pred ccccchHHHHHHh-hhcCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhccCccceeeeeee
Q 012978 336 VGEKASQETLKLW-KENGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRKMAIGLQISEPW 414 (452)
Q Consensus 336 ~~~~~~~~~~~~~-~~~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~~~v~l~l~E~~ 414 (452)
...+..+.+ ..+.||.++.+.+ +|+.++..+...|+|+|.+++++|+.+++.++...|+.. |.++++.|.|
T Consensus 145 ----~~~d~~~~~~~~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~--f~~~~~~~~~ 216 (248)
T 2yvl_A 145 ----FNVDFKDAEVPEGIFHAAFVDVR--EPWHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENY--FGNLEVVEIL 216 (248)
T ss_dssp ----ECSCTTTSCCCTTCBSEEEECSS--CGGGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTT--EEEEEEEEEE
T ss_pred ----EEcChhhcccCCCcccEEEECCc--CHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh--CCcceEEEee
Confidence 000000011 1357998888764 899999999999999999999999999999999999864 9999999999
Q ss_pred eeeeeecCCCCCCCCcccCceEEEEEEEEec
Q 012978 415 LREYQVLPSRTHPCMQMSGCGGYILSGTRTA 445 (452)
Q Consensus 415 lR~yQVLP~RTHP~m~m~~~~GyiLsg~kv~ 445 (452)
.|.|++.|.++||...|.+|+||+++|+|+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~l~~~rk~~ 247 (248)
T 2yvl_A 217 HRHYKTISERFRPEDQMVAHTAYLVFGRKLK 247 (248)
T ss_dssp EEEECCCGGGCCBCSEEECCSCEEEEEEECC
T ss_pred eeEeecccCccCCCccCCCccEEEEEEEecc
Confidence 9999999999999999999999999999984
No 6
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.85 E-value=1.1e-20 Score=189.80 Aligned_cols=271 Identities=15% Similarity=0.182 Sum_probs=174.4
Q ss_pred cCCCCCccCCCEEEEEeCCCC--eEEEEEEccCCEEEEcceeeecCCccCCCCCcEEEEeCCCCCCCccccCCCCcchhh
Q 012978 11 IRNAQLTWEGCSVLLDINDGD--RLVFARLTSGSTLKIGNKNCSLQPLIGCPFGSLFQVDNGKEGPNLSRVIPSTEDDVQ 88 (452)
Q Consensus 11 ~~~~~~i~eGd~Vll~~~~g~--~~~~v~l~~~~~v~~gK~~f~~~~lIG~pyG~~fei~~~~~~~~~~~~~~~~d~~~~ 88 (452)
++....|++||.|+|..++|. +.+++++++|+.++..+|.+.++++||++||+.|....|...
T Consensus 4 ~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ig~~~~~~~~~~~g~~~--------------- 68 (336)
T 2b25_A 4 TSRERPFQAGELILAETGEGETKFKKLFRLNNFGLLNSNWGAVPFGKIVGKFPGQILRSSFGKQY--------------- 68 (336)
T ss_dssp ----CCCCTTCEEEEEC----CCCEEEEECCSSCBCC-----CBHHHHTTCCTTEEEECTTSCEE---------------
T ss_pred cccCCCCCCCCEEEEEeCCCCccceeeEEecCCCEEEcccCcEeHHHHcCCCCCceEEeCCCcEE---------------
Confidence 345568999999999888664 255788999999999999999999999999998875433211
Q ss_pred hhhhhhccccccCccccccCcccccCCHHHHHHHHHcCCChHHHHHHHHhccccccccccccHHHHHHHhhhccCCcEEE
Q 012978 89 EKEDAQISGEFRDNRAIVDDNKAQCLSGEDIDEMRRQGATGEEIVEALIANSATFEKKTSFSQEKYKLKKQKKYAPKVLL 168 (452)
Q Consensus 89 ~~~~~~~~~~~~dNr~i~Dd~~~QkLs~eeI~~lK~~g~sG~eII~~LvenS~tF~~KT~FSqeKYlkkK~kKy~~~~~i 168 (452)
.+
T Consensus 69 ------------------------------------------------------------------------------~~ 70 (336)
T 2b25_A 69 ------------------------------------------------------------------------------ML 70 (336)
T ss_dssp ------------------------------------------------------------------------------EE
T ss_pred ------------------------------------------------------------------------------Ee
Confidence 11
Q ss_pred eCCChHHHHHHHHhcCcccccccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecCCCCCchh
Q 012978 169 RRPFARSICEAYFKKNPARIGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIGDSLYPMD 248 (452)
Q Consensus 169 ~~pt~~~l~e~y~~Kdp~Ki~~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~~~~~~~~ 248 (452)
.+|+... |...-+.....+.+...++|+.++++.+|.+||.+++++|.++.+++.++|..+.|+.++...
T Consensus 71 ~~p~~~~----~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~------ 140 (336)
T 2b25_A 71 RRPALED----YVVLMKRGTAITFPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRK------ 140 (336)
T ss_dssp ECCCHHH----HHHHSCCSSCCCCHHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSH------
T ss_pred cCCCHHH----HhhhhcCCCcccCHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCH------
Confidence 1222211 111112222233444468899999999999999999999999999999999889999997632
Q ss_pred hhhhcCCCHHHHHhhhccccccccc---cCcCcccchhhhhhhhhhcccccccCCCCcccccccccccccchhhhhcCCC
Q 012978 249 IVRIFNFSNEICKSIVRASVSDVTS---QSETSEQSDQLESACNMEIQSNEQKSSSVSMEDISLSSENGVSDLILEANHS 325 (452)
Q Consensus 249 ~~~~~nf~~~~~~~~~~~~l~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (452)
+..+.+.. ++..+.. ....... .. +..-...+
T Consensus 141 ---------~~~~~a~~-~~~~~~~~~~ln~~~~~-----------------------~~--------~v~~~~~d---- 175 (336)
T 2b25_A 141 ---------DHHDLAKK-NYKHWRDSWKLSHVEEW-----------------------PD--------NVDFIHKD---- 175 (336)
T ss_dssp ---------HHHHHHHH-HHHHHHHHHTTTCSSCC-----------------------CC--------CEEEEESC----
T ss_pred ---------HHHHHHHH-HHHHhhccccccccccc-----------------------CC--------ceEEEECC----
Confidence 22222111 1111000 0000000 00 00000000
Q ss_pred ccccccccccccccchHHHHHHhhhcCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHh-ccC
Q 012978 326 PVNKISKSHKVGEKASQETLKLWKENGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQV-RKM 404 (452)
Q Consensus 326 ~~~~~~k~~~~~~~~~~~~~~~~~~~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~-~~~ 404 (452)
..+....+..+.||.++++.+ +|+.++..+...|+|+|.+++|++..+++.+++..|+. ...
T Consensus 176 ---------------~~~~~~~~~~~~fD~V~~~~~--~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~~~~ 238 (336)
T 2b25_A 176 ---------------ISGATEDIKSLTFDAVALDML--NPHVTLPVFYPHLKHGGVCAVYVVNITQVIELLDGIRTCELA 238 (336)
T ss_dssp ---------------TTCCC-------EEEEEECSS--STTTTHHHHGGGEEEEEEEEEEESSHHHHHHHHHHHHHHTCC
T ss_pred ---------------hHHcccccCCCCeeEEEECCC--CHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhcCCC
Confidence 000000122357998888765 79999999999999999999999999999999999986 355
Q ss_pred ccceeeeeeeeeeeeec-----------------------------------------------------CCCCCCCCcc
Q 012978 405 AIGLQISEPWLREYQVL-----------------------------------------------------PSRTHPCMQM 431 (452)
Q Consensus 405 ~v~l~l~E~~lR~yQVL-----------------------------------------------------P~RTHP~m~m 431 (452)
|....+.|...|.|.++ |.++||..+|
T Consensus 239 ~~~~~~~~~~~~~w~~~~~~~~~g~y~~~l~~aGF~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~ 318 (336)
T 2b25_A 239 LSCEKISEVIVRDWLVCLAKQKNGILAQKVESKINTDVQLDSQEKIGVKGELFQEDDHEESHSDFPYGSFPYVARPVHWQ 318 (336)
T ss_dssp EEEEEEECCCCCCEEECC------------------------------------------------------CEEECSSC
T ss_pred cccceEEEecccceEEEeecccccchhhhhcccccccccccccccccccchhhhhccccccccccccccCcccCCCCCcc
Confidence 78888899999999996 8999999999
Q ss_pred cCceEEEEEEEEecC
Q 012978 432 SGCGGYILSGTRTAT 446 (452)
Q Consensus 432 ~~~~GyiLsg~kv~~ 446 (452)
.+|+|||++++|+.+
T Consensus 319 ~~~tgfl~~~r~~~~ 333 (336)
T 2b25_A 319 PGHTAFLVKLRKVKP 333 (336)
T ss_dssp CCCCCEEEEEEEC--
T ss_pred ccCceEEEEEEcccc
Confidence 999999999999875
No 7
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.56 E-value=1.1e-13 Score=134.90 Aligned_cols=172 Identities=16% Similarity=0.231 Sum_probs=125.1
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecCCCCCchhhhhhcCCCHHHHHhhhccccccccccC
Q 012978 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIGDSLYPMDIVRIFNFSNEICKSIVRASVSDVTSQS 275 (452)
Q Consensus 196 La~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~~~~~~~~~~~~~nf~~~~~~~~~~~~l~~l~~~~ 275 (452)
.+.++.++++.+|.+||.++.+.|.++..+++++++.++|+.++... +..+.+.. ++.... .
T Consensus 99 ~~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~---------------~~~~~a~~-~~~~~~--g 160 (275)
T 1yb2_A 99 ASYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDE---------------DNLKKAMD-NLSEFY--D 160 (275)
T ss_dssp -------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCH---------------HHHHHHHH-HHHTTS--C
T ss_pred HHHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCH---------------HHHHHHHH-HHHhcC--C
Confidence 37888889999999999999999999999999988878898886522 22222211 110000 0
Q ss_pred cCcccchhhhhhhhhhcccccccCCCCcccccccccccccchhhhhcCCCccccccccccccccchHHHHHHhhhcCcce
Q 012978 276 ETSEQSDQLESACNMEIQSNEQKSSSVSMEDISLSSENGVSDLILEANHSPVNKISKSHKVGEKASQETLKLWKENGFSS 355 (452)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~D~ 355 (452)
.. .. .....++.+.+..+.||.
T Consensus 161 ~~------------------------------------~v----------------------~~~~~d~~~~~~~~~fD~ 182 (275)
T 1yb2_A 161 IG------------------------------------NV----------------------RTSRSDIADFISDQMYDA 182 (275)
T ss_dssp CT------------------------------------TE----------------------EEECSCTTTCCCSCCEEE
T ss_pred CC------------------------------------cE----------------------EEEECchhccCcCCCccE
Confidence 00 00 000000000112357998
Q ss_pred EEEeCCCCChHHHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhccCccceeeeeeeeeeeeecCCCCCCCCcccCce
Q 012978 356 MIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRKMAIGLQISEPWLREYQVLPSRTHPCMQMSGCG 435 (452)
Q Consensus 356 liia~~~~dP~~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~~~v~l~l~E~~lR~yQVLP~RTHP~m~m~~~~ 435 (452)
+++..+ +|+.++..+...|+|+|.+++++|..+++.++...|+.. +|..+++.|.+.|.|.+.+.+++|...|.+|+
T Consensus 183 Vi~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~-Gf~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~ 259 (275)
T 1yb2_A 183 VIADIP--DPWNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSAS-GMHHLETVELMKRRILVREGATRPASDDLTHT 259 (275)
T ss_dssp EEECCS--CGGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGG-TEEEEEEEEEEECCCCCCTTCCCCGGGGSCEE
T ss_pred EEEcCc--CHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHC-CCeEEEEEEEecceeEecCCccccccccCCCc
Confidence 888664 899999999999999999999999999999999999874 59999999999999999999999999999999
Q ss_pred EEEEEEEEecC
Q 012978 436 GYILSGTRTAT 446 (452)
Q Consensus 436 GyiLsg~kv~~ 446 (452)
||++.|+|..+
T Consensus 260 ~~li~ark~~~ 270 (275)
T 1yb2_A 260 AFITFAIKKSG 270 (275)
T ss_dssp EEEEEEEECCS
T ss_pred EEEEEEEehhc
Confidence 99999999753
No 8
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.54 E-value=2.1e-06 Score=78.71 Aligned_cols=172 Identities=8% Similarity=-0.032 Sum_probs=116.6
Q ss_pred cchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecCCCCCchhhhhhcCCCHHHHHhhhcccccc
Q 012978 191 LRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIGDSLYPMDIVRIFNFSNEICKSIVRASVSD 270 (452)
Q Consensus 191 lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~~~~~~~~~~~~~nf~~~~~~~~~~~~l~~ 270 (452)
.+.+..+.++...++.+|.+||.++.+.|.++..++.+ ++.++|+.++... +..+.+.. ++..
T Consensus 24 ~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~-~~~~~v~~vD~s~---------------~~~~~a~~-~~~~ 86 (204)
T 3e05_A 24 TKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNL-MPNGRIFALERNP---------------QYLGFIRD-NLKK 86 (204)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHH-CTTSEEEEEECCH---------------HHHHHHHH-HHHH
T ss_pred ChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHH-CCCCEEEEEeCCH---------------HHHHHHHH-HHHH
Confidence 55566689999999999999999999999999999887 6677899887632 22222211 1110
Q ss_pred ccccCcCcccchhhhhhhhhhcccccccCCCCcccccccccccccchhhhhcCCCccccccccccccccchHHHHHHh-h
Q 012978 271 VTSQSETSEQSDQLESACNMEIQSNEQKSSSVSMEDISLSSENGVSDLILEANHSPVNKISKSHKVGEKASQETLKLW-K 349 (452)
Q Consensus 271 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~-~ 349 (452)
.. ... . . . ...+..+.+ .
T Consensus 87 ~~-~~~---v----------~--------------------------~---------------------~~~d~~~~~~~ 105 (204)
T 3e05_A 87 FV-ARN---V----------T--------------------------L---------------------VEAFAPEGLDD 105 (204)
T ss_dssp HT-CTT---E----------E--------------------------E---------------------EECCTTTTCTT
T ss_pred hC-CCc---E----------E--------------------------E---------------------EeCChhhhhhc
Confidence 00 000 0 0 0 000000000 0
Q ss_pred hcCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhccCccceeeeeeeeeeeeecCCCCCCCC
Q 012978 350 ENGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRKMAIGLQISEPWLREYQVLPSRTHPCM 429 (452)
Q Consensus 350 ~~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~~~v~l~l~E~~lR~yQVLP~RTHP~m 429 (452)
...||.+++.....++..++..+...|+|+|.|++..+..+...++...|+.. +| .+.+.+.....++-+.. -.+
T Consensus 106 ~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~-g~-~~~~~~~~~~~~~~~~~---~~~ 180 (204)
T 3e05_A 106 LPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDH-GY-MVEVACVNVAKTKGLTE---YKM 180 (204)
T ss_dssp SCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHT-TC-EEEEEEEEEEEEC---C---CCB
T ss_pred CCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHC-CC-ceeEEEEEeecceEccc---eEE
Confidence 14699888876556899999999999999999999999999999999999875 47 88888877776665432 223
Q ss_pred cccCceEEEEEEEEec
Q 012978 430 QMSGCGGYILSGTRTA 445 (452)
Q Consensus 430 ~m~~~~GyiLsg~kv~ 445 (452)
.....--||++|.++.
T Consensus 181 ~~~~~Pv~i~~~~~~~ 196 (204)
T 3e05_A 181 FESHNPVYIITAWKSD 196 (204)
T ss_dssp CEECCCEEEEEEECC-
T ss_pred eccCCCeEEEEEEcCC
Confidence 4455789999998875
No 9
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.24 E-value=1.2e-05 Score=71.73 Aligned_cols=172 Identities=12% Similarity=0.036 Sum_probs=112.4
Q ss_pred ccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecCCCCCchhhhhhcCCCHHHHHhhhccccc
Q 012978 190 FLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIGDSLYPMDIVRIFNFSNEICKSIVRASVS 269 (452)
Q Consensus 190 ~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~~~~~~~~~~~~~nf~~~~~~~~~~~~l~ 269 (452)
..+......++...++.+|.+||.++.+.|.++..++.+. +.|+.++.. ++..+.+.. ++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~---------------~~~~~~a~~-~~~ 76 (192)
T 1l3i_A 16 PTAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRN---------------PEAISTTEM-NLQ 76 (192)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESC---------------HHHHHHHHH-HHH
T ss_pred CChHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECC---------------HHHHHHHHH-HHH
Confidence 3445556677888899999999999999999999998865 677777652 122221111 110
Q ss_pred cccccCcCcccchhhhhhhhhhcccccccCCCCcccccccccccccchhhhhcCCCccccccccccccccchHHHHHHhh
Q 012978 270 DVTSQSETSEQSDQLESACNMEIQSNEQKSSSVSMEDISLSSENGVSDLILEANHSPVNKISKSHKVGEKASQETLKLWK 349 (452)
Q Consensus 270 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 349 (452)
.. +... +......+..+.+.
T Consensus 77 ~~------------------------------------------~~~~------------------~~~~~~~d~~~~~~ 96 (192)
T 1l3i_A 77 RH------------------------------------------GLGD------------------NVTLMEGDAPEALC 96 (192)
T ss_dssp HT------------------------------------------TCCT------------------TEEEEESCHHHHHT
T ss_pred Hc------------------------------------------CCCc------------------ceEEEecCHHHhcc
Confidence 00 0000 00000011112222
Q ss_pred h-cCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhccCccceeeeeeeeeeeeecCCCCCCC
Q 012978 350 E-NGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRKMAIGLQISEPWLREYQVLPSRTHPC 428 (452)
Q Consensus 350 ~-~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~~~v~l~l~E~~lR~yQVLP~RTHP~ 428 (452)
. +.||.+++..+.+++..++..+...|+|+|.+++..+..+.+.+....|++. +| .+.+.+.+.+.+..+.+.+ .
T Consensus 97 ~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~-g~-~~~~~~~~~~~~~~~~~~~-~- 172 (192)
T 1l3i_A 97 KIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDL-GF-DVNITELNIARGRALDRGT-M- 172 (192)
T ss_dssp TSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHT-TC-CCEEEEEEEEEEEEETTEE-E-
T ss_pred cCCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHC-CC-ceEEEEEEcccCeEecCce-e-
Confidence 2 4799777765446789999999999999999999999999999999998875 47 8888888888877665432 1
Q ss_pred CcccCceEEEEEEEEec
Q 012978 429 MQMSGCGGYILSGTRTA 445 (452)
Q Consensus 429 m~m~~~~GyiLsg~kv~ 445 (452)
......-||+.++|..
T Consensus 173 -~~~~~p~~l~~~~k~~ 188 (192)
T 1l3i_A 173 -MVSRNPVALIYTGVSH 188 (192)
T ss_dssp -EEECCCEEEEECCC--
T ss_pred -ecCCCCEEEEEEeccc
Confidence 1123445898887753
No 10
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.23 E-value=6.8e-05 Score=66.35 Aligned_cols=166 Identities=10% Similarity=0.077 Sum_probs=114.6
Q ss_pred ccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecCCCCCchhhhhhcCCCHHHHHhhhccccc
Q 012978 190 FLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIGDSLYPMDIVRIFNFSNEICKSIVRASVS 269 (452)
Q Consensus 190 ~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~~~~~~~~~~~~~nf~~~~~~~~~~~~l~ 269 (452)
.........++...++.+|.+||.++.+.|.++.+++. +.+.++.++.. ++..+.+.. ++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~---------------~~~~~~a~~-~~~ 78 (183)
T 2yxd_A 18 ITKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYL---------------DGAIEVTKQ-NLA 78 (183)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECS---------------HHHHHHHHH-HHH
T ss_pred cCHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCC---------------HHHHHHHHH-HHH
Confidence 34455567788888899999999999999999999988 45678877652 122222111 111
Q ss_pred cccccCcCcccchhhhhhhhhhcccccccCCCCcccccccccccccchhhhhcCCCccccccccccccccchHHHHHHhh
Q 012978 270 DVTSQSETSEQSDQLESACNMEIQSNEQKSSSVSMEDISLSSENGVSDLILEANHSPVNKISKSHKVGEKASQETLKLWK 349 (452)
Q Consensus 270 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 349 (452)
.. +.. +......+..+.+.
T Consensus 79 ~~------------------------------------------~~~-------------------~~~~~~~d~~~~~~ 97 (183)
T 2yxd_A 79 KF------------------------------------------NIK-------------------NCQIIKGRAEDVLD 97 (183)
T ss_dssp HT------------------------------------------TCC-------------------SEEEEESCHHHHGG
T ss_pred Hc------------------------------------------CCC-------------------cEEEEECCcccccc
Confidence 00 000 00000111222333
Q ss_pred hcCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhccCccceeeeeeeeeeeeecCCCCCCCC
Q 012978 350 ENGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRKMAIGLQISEPWLREYQVLPSRTHPCM 429 (452)
Q Consensus 350 ~~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~~~v~l~l~E~~lR~yQVLP~RTHP~m 429 (452)
.+.||.++...+ .++..++..+... |+|.+++..+..+.+.++...|++.+ ..++..+...+.++.++...+
T Consensus 98 ~~~~D~i~~~~~-~~~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~~~~~~~~~~--- 169 (183)
T 2yxd_A 98 KLEFNKAFIGGT-KNIEKIIEILDKK--KINHIVANTIVLENAAKIINEFESRG--YNVDAVNVFISYAKKIPSGHM--- 169 (183)
T ss_dssp GCCCSEEEECSC-SCHHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEEEEEEEEEEETTEEE---
T ss_pred CCCCcEEEECCc-ccHHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcC--CeEEEEEeeeehhhccCCceE---
Confidence 468997777665 6788899998888 99999999999999999999998865 578888888999988887632
Q ss_pred cccCceEEEEEEEE
Q 012978 430 QMSGCGGYILSGTR 443 (452)
Q Consensus 430 ~m~~~~GyiLsg~k 443 (452)
....+.-||++|+|
T Consensus 170 ~~~~~p~~l~~~~k 183 (183)
T 2yxd_A 170 FLAKNPITIIKAVR 183 (183)
T ss_dssp EEECCCEEEEEEEC
T ss_pred EecCCCEEEEEecC
Confidence 33457789999875
No 11
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=97.93 E-value=5e-05 Score=70.37 Aligned_cols=53 Identities=17% Similarity=0.118 Sum_probs=42.4
Q ss_pred ccccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 188 IGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 188 i~~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
++.+....-..+-.++.+.++.+||.++++.|..+.+++++++..|+|+.++.
T Consensus 39 ~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~ 91 (223)
T 3duw_A 39 AHDVSPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEA 91 (223)
T ss_dssp SCSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEES
T ss_pred CcccCHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEEC
Confidence 34455555555555667788999999999999999999999976789998876
No 12
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=97.89 E-value=8.6e-05 Score=70.68 Aligned_cols=50 Identities=16% Similarity=0.155 Sum_probs=40.4
Q ss_pred cchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 191 LRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 191 lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+.......+-.++.+.++.+||.++++.|..+.++++++++.|+|+.++.
T Consensus 47 ~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~ 96 (248)
T 3tfw_A 47 VAANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEA 96 (248)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEEC
T ss_pred cCHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEEC
Confidence 33444444445557788999999999999999999999987889999876
No 13
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=97.85 E-value=0.00023 Score=65.68 Aligned_cols=146 Identities=8% Similarity=-0.059 Sum_probs=94.8
Q ss_pred cchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecCCCCCchhhhhhcCCCHHHHHhhhcccccc
Q 012978 191 LRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIGDSLYPMDIVRIFNFSNEICKSIVRASVSD 270 (452)
Q Consensus 191 lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~~~~~~~~~~~~~nf~~~~~~~~~~~~l~~ 270 (452)
...+..+.++...++.+|.+||.++.+.|.++..++.+ .++|+.++... +.++.+.. ++..
T Consensus 39 ~~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~---------------~~~~~a~~-~~~~ 99 (204)
T 3njr_A 39 TKSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRA---------------DRIENIQK-NIDT 99 (204)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCH---------------HHHHHHHH-HHHH
T ss_pred CcHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCH---------------HHHHHHHH-HHHH
Confidence 34455678889999999999999999999999999998 45788887632 22222211 1111
Q ss_pred ccccCcCcccchhhhhhhhhhcccccccCCCCcccccccccccccchhhhhcCCCccccccccccccccchHHHHHHh-h
Q 012978 271 VTSQSETSEQSDQLESACNMEIQSNEQKSSSVSMEDISLSSENGVSDLILEANHSPVNKISKSHKVGEKASQETLKLW-K 349 (452)
Q Consensus 271 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~-~ 349 (452)
.. ... +. . ....++.+.+ .
T Consensus 100 ~g-~~~-------------------------------------~v-~---------------------~~~~d~~~~~~~ 119 (204)
T 3njr_A 100 YG-LSP-------------------------------------RM-R---------------------AVQGTAPAALAD 119 (204)
T ss_dssp TT-CTT-------------------------------------TE-E---------------------EEESCTTGGGTT
T ss_pred cC-CCC-------------------------------------CE-E---------------------EEeCchhhhccc
Confidence 00 000 00 0 0000000001 1
Q ss_pred hcCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhccCccceeeeeeeeeeeeec
Q 012978 350 ENGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRKMAIGLQISEPWLREYQVL 421 (452)
Q Consensus 350 ~~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~~~v~l~l~E~~lR~yQVL 421 (452)
...||.+++.. ..++. ++..+...|+|+|.|++.+...+.+.++...|+..+ ..+.......++-+
T Consensus 120 ~~~~D~v~~~~-~~~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g----~~i~~i~~~~~~~~ 185 (204)
T 3njr_A 120 LPLPEAVFIGG-GGSQA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHG----GQLLRIDIAQAEPL 185 (204)
T ss_dssp SCCCSEEEECS-CCCHH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHC----SEEEEEEEEEEEEE
T ss_pred CCCCCEEEECC-cccHH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCC----CcEEEEEeeccccc
Confidence 14699888876 46788 999999999999999999999999999999998765 44444444444433
No 14
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.74 E-value=8.5e-05 Score=68.77 Aligned_cols=58 Identities=12% Similarity=0.021 Sum_probs=47.6
Q ss_pred cCcccccccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 183 KNPARIGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 183 Kdp~Ki~~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..|.-...+..+....+..++.+.++.+||.++++.|..+.++++++++.++|+.++.
T Consensus 40 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~ 97 (225)
T 3tr6_A 40 SFSTYAMQTAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDV 97 (225)
T ss_dssp HCTTGGGSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEES
T ss_pred hCCCCccccCHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeC
Confidence 4444446677777777777777888999999999999999999999987789998876
No 15
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=97.61 E-value=0.0004 Score=66.18 Aligned_cols=38 Identities=16% Similarity=0.283 Sum_probs=35.9
Q ss_pred cCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 203 GNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 203 anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
-+|+||++||.++.++|..+..+++++|++|+||.++.
T Consensus 73 l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~ 110 (233)
T 4df3_A 73 LPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEF 110 (233)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEEC
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeC
Confidence 46899999999999999999999999999999999976
No 16
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=97.57 E-value=0.0013 Score=57.89 Aligned_cols=132 Identities=8% Similarity=-0.007 Sum_probs=85.5
Q ss_pred hhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecCCCCCchhhhhhcCCCHHHHHhhhcccccccc
Q 012978 193 VDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIGDSLYPMDIVRIFNFSNEICKSIVRASVSDVT 272 (452)
Q Consensus 193 ~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~~~~~~~~~~~~~nf~~~~~~~~~~~~l~~l~ 272 (452)
.+..+.++....+.+|.+||.++.+.|.++..++.+.+ .+.|+.++.. ++..+.+.. ++....
T Consensus 11 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~-~~~v~~vD~~---------------~~~~~~a~~-~~~~~~ 73 (178)
T 3hm2_A 11 QHVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTP-QTTAVCFEIS---------------EERRERILS-NAINLG 73 (178)
T ss_dssp HHHHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSS-SEEEEEECSC---------------HHHHHHHHH-HHHTTT
T ss_pred HHHHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCC-CCeEEEEeCC---------------HHHHHHHHH-HHHHhC
Confidence 34457788888999999999999999999999999873 4677777652 222222211 111100
Q ss_pred ccCcCcccchhhhhhhhhhcccccccCCCCcccccccccccccchhhhhcCCCccccccccccccccchHHHHHHhhh--
Q 012978 273 SQSETSEQSDQLESACNMEIQSNEQKSSSVSMEDISLSSENGVSDLILEANHSPVNKISKSHKVGEKASQETLKLWKE-- 350 (452)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~-- 350 (452)
... .. ... .+..+.+..
T Consensus 74 -~~~-------------------------------------~~-~~~----------------------~d~~~~~~~~~ 92 (178)
T 3hm2_A 74 -VSD-------------------------------------RI-AVQ----------------------QGAPRAFDDVP 92 (178)
T ss_dssp -CTT-------------------------------------SE-EEE----------------------CCTTGGGGGCC
T ss_pred -CCC-------------------------------------CE-EEe----------------------cchHhhhhccC
Confidence 000 00 000 000011112
Q ss_pred cCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhcc
Q 012978 351 NGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRK 403 (452)
Q Consensus 351 ~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~ 403 (452)
+.||.+++... .+...++..+...|+|+|.+++.....+...+....++..+
T Consensus 93 ~~~D~i~~~~~-~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~ 144 (178)
T 3hm2_A 93 DNPDVIFIGGG-LTAPGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFG 144 (178)
T ss_dssp SCCSEEEECC--TTCTTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHC
T ss_pred CCCCEEEECCc-ccHHHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcC
Confidence 57998877654 33477999999999999999999999999888888887653
No 17
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=97.48 E-value=0.00035 Score=65.54 Aligned_cols=45 Identities=16% Similarity=0.135 Sum_probs=36.7
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 196 La~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
|.+++...+.+++.+||.++++.|..+.++++++++.|+|+.++.
T Consensus 45 l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~ 89 (221)
T 3dr5_A 45 LTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDP 89 (221)
T ss_dssp HHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECS
T ss_pred HHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEEC
Confidence 444555555555669999999999999999999987899999876
No 18
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=97.46 E-value=0.00022 Score=66.13 Aligned_cols=57 Identities=18% Similarity=0.204 Sum_probs=45.8
Q ss_pred cccccccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecC
Q 012978 185 PARIGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIG 241 (452)
Q Consensus 185 p~Ki~~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~ 241 (452)
+.....+.......+..++.+.++.+||.++++.|..+.++++++++.++|+.++..
T Consensus 47 ~~~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~ 103 (229)
T 2avd_A 47 PQGDSMMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVD 103 (229)
T ss_dssp TTGGGSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESC
T ss_pred CCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECC
Confidence 334456666666666677778889999999999999999999998777899988763
No 19
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=97.45 E-value=0.00032 Score=66.65 Aligned_cols=55 Identities=15% Similarity=0.082 Sum_probs=45.9
Q ss_pred ccccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecCC
Q 012978 188 IGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIGD 242 (452)
Q Consensus 188 i~~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~~ 242 (452)
...+..+....+..++...++.+||.++++.|..+.+++++++..|+|+.++...
T Consensus 41 ~~~i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~ 95 (242)
T 3r3h_A 41 NMQVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINE 95 (242)
T ss_dssp GTSCCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCC
T ss_pred CCccCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCH
Confidence 4556677777777777777889999999999999999999998789999998743
No 20
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=97.43 E-value=0.00024 Score=72.10 Aligned_cols=97 Identities=8% Similarity=0.021 Sum_probs=71.1
Q ss_pred hcCcceEEEeCCC---CChHHHHHhHHhcccCCCcEEEEeCChH----------------------HHHHHHHHHHhccC
Q 012978 350 ENGFSSMIVVAPE---LDPWSFVKDLLPLLSYSAPFAIYHQYLQ----------------------PLATCMHSLQVRKM 404 (452)
Q Consensus 350 ~~~~D~liia~~~---~dP~~il~~ll~~L~pS~p~VVYsp~~e----------------------pL~e~~~~L~~~~~ 404 (452)
.+.||.++..... .||..++..+...|+|+|.|++..++.. ...++...|+.. +
T Consensus 164 ~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a-G 242 (383)
T 4fsd_A 164 DSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEA-G 242 (383)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHT-T
T ss_pred CCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHC-C
Confidence 3578966655411 3789999999999999999988654321 124455555554 5
Q ss_pred ccceeeeeeeeeeeeecCCCCCCCCcccCceEEEEEEEEecCCCC
Q 012978 405 AIGLQISEPWLREYQVLPSRTHPCMQMSGCGGYILSGTRTATNAS 449 (452)
Q Consensus 405 ~v~l~l~E~~lR~yQVLP~RTHP~m~m~~~~GyiLsg~kv~~~~~ 449 (452)
|..+++.+ .+.|.+......+.|...+..|++..+.|+.....
T Consensus 243 F~~v~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~ 285 (383)
T 4fsd_A 243 FRDVRLVS--VGPVDVSDPQLRKLVPDVQFYSCTFRCFKVATLEA 285 (383)
T ss_dssp CCCEEEEE--EEEECCCCHHHHTTSTTCCEEEEEEEEECCTTCCS
T ss_pred CceEEEEe--ccccccCCHhHHHHhcCCceeEEEEEEEecCCCcc
Confidence 88887777 56788887778889999999999999999875543
No 21
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=97.34 E-value=0.002 Score=61.24 Aligned_cols=58 Identities=16% Similarity=0.087 Sum_probs=44.6
Q ss_pred CcccccccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecC
Q 012978 184 NPARIGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIG 241 (452)
Q Consensus 184 dp~Ki~~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~ 241 (452)
.+.-+..+.++.-..+-.++...++.+||.++++.|..+.++++++...|+|+.++..
T Consensus 56 ~~~~~~~~~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s 113 (247)
T 1sui_A 56 HPWNIMTTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDIN 113 (247)
T ss_dssp STTGGGSCCHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESC
T ss_pred cCCCCCCcCHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECC
Confidence 3333455666665555555666778999999999999999999999767899998763
No 22
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=97.27 E-value=0.00075 Score=60.97 Aligned_cols=47 Identities=21% Similarity=0.007 Sum_probs=41.8
Q ss_pred hHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 194 DMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 194 DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
-.++..+..+.+.+|.+||.++.+.|.++.+++.++|+.|.|+.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~ 55 (197)
T 3eey_A 9 LGQSHDYIKMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDI 55 (197)
T ss_dssp HHHHHHHHHHHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECS
T ss_pred HHHHHHHHHhcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEEC
Confidence 34677778889999999999999999999999999998889998876
No 23
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=97.27 E-value=0.00052 Score=64.43 Aligned_cols=51 Identities=16% Similarity=0.105 Sum_probs=41.2
Q ss_pred ccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 190 FLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 190 ~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.+.++....+..++.+.++.+||.++++.|..+.+++.+++..|+|+.++.
T Consensus 55 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~ 105 (232)
T 3cbg_A 55 QISPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQ 105 (232)
T ss_dssp SCCHHHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEES
T ss_pred CcCHHHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEEC
Confidence 445555555555666778899999999999999999999976789998876
No 24
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=97.25 E-value=0.0012 Score=62.35 Aligned_cols=58 Identities=10% Similarity=-0.021 Sum_probs=45.2
Q ss_pred cCcccccccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 183 KNPARIGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 183 Kdp~Ki~~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+.-+..+..+.-..+-.++...++.+||+++++.|..+.++++++++.|+|+.++.
T Consensus 46 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~ 103 (237)
T 3c3y_A 46 SHPDSYMSTSPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDF 103 (237)
T ss_dssp TSTTGGGSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEES
T ss_pred hcCCCCCCcCHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEEC
Confidence 3333355666666555555566777899999999999999999999987789999876
No 25
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=97.23 E-value=0.001 Score=61.66 Aligned_cols=52 Identities=13% Similarity=-0.088 Sum_probs=43.7
Q ss_pred cccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 189 GFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 189 ~~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+..+.-..+..++...++.+||.++++.|..+..++++++..++|+.++.
T Consensus 40 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~ 91 (221)
T 3u81_A 40 MNVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEI 91 (221)
T ss_dssp GGCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEES
T ss_pred cccCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeC
Confidence 4566666666666777778999999999999999999999887789998876
No 26
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=97.18 E-value=0.0006 Score=63.92 Aligned_cols=51 Identities=14% Similarity=0.055 Sum_probs=42.1
Q ss_pred cccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 189 GFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 189 ~~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+..+....|..++.+.++.+||.++++.|..+.+++. .+..++|+.++.
T Consensus 53 ~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~-~~~~~~v~~vD~ 103 (232)
T 3ntv_A 53 PIVDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFAS-ISDDIHVTTIER 103 (232)
T ss_dssp CCCCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHT-TCTTCEEEEEEC
T ss_pred CCcCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHH-hCCCCEEEEEEC
Confidence 345677777778888888999999999999999999998 445678988876
No 27
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=97.09 E-value=0.00031 Score=69.08 Aligned_cols=71 Identities=11% Similarity=0.026 Sum_probs=51.5
Q ss_pred HHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhccCccceeee-------eeee--eeeeecCCCCCCCC-cccCceE
Q 012978 367 SFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRKMAIGLQIS-------EPWL--REYQVLPSRTHPCM-QMSGCGG 436 (452)
Q Consensus 367 ~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~~~v~l~l~-------E~~l--R~yQVLP~RTHP~m-~m~~~~G 436 (452)
.++..+...|+|+|.|++.........++...|+.. +|-.+++. |.|+ |.|. ++.+|.+ .+..|.+
T Consensus 152 ~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~-GF~~v~~~asr~~s~e~~lv~~~~~---~~~~~~i~~~~~h~~ 227 (290)
T 2xyq_A 152 YLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHF-SWWTAFVTNVNASSSEAFLIGANYL---GKPKEQIDGYTMHAN 227 (290)
T ss_dssp HHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTE-EEEEEEEEGGGTTSSCEEEEEEEEC---SSCSSCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHc-CCcEEEEEEcCCCchheEEecCCcc---CCCcccCCccccccc
Confidence 688999999999999998654444445666666653 37778887 8888 8887 5567764 3455888
Q ss_pred EEEEE
Q 012978 437 YILSG 441 (452)
Q Consensus 437 yiLsg 441 (452)
||+++
T Consensus 228 ~i~~~ 232 (290)
T 2xyq_A 228 YIFWR 232 (290)
T ss_dssp HHHHH
T ss_pred eEEEe
Confidence 88743
No 28
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=96.97 E-value=0.0011 Score=62.25 Aligned_cols=52 Identities=10% Similarity=0.078 Sum_probs=44.9
Q ss_pred cccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 189 GFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 189 ~~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+.+.+.....|..++.+.++.+||.++++.|..+..++.+++..++|+.++.
T Consensus 42 ~~~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~ 93 (239)
T 2hnk_A 42 MQISPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDV 93 (239)
T ss_dssp CSCCHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEES
T ss_pred cccCHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEEC
Confidence 3567777778888888889999999999999999999999876778998876
No 29
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=96.96 E-value=0.003 Score=62.39 Aligned_cols=49 Identities=14% Similarity=0.020 Sum_probs=41.0
Q ss_pred chhHHHHHH-HhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 192 RVDMLSLLL-SMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 192 R~DtLa~iL-~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..|.-++++ .+.++.+|.+||.++.+.|..+..+++++++.|.|+.++.
T Consensus 102 ~qd~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~ 151 (315)
T 1ixk_A 102 IQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDV 151 (315)
T ss_dssp ECCHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECS
T ss_pred EeCHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcC
Confidence 344556553 4568999999999999999999999999998899998876
No 30
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=96.94 E-value=0.0014 Score=62.23 Aligned_cols=39 Identities=15% Similarity=0.199 Sum_probs=35.9
Q ss_pred cCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecC
Q 012978 203 GNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIG 241 (452)
Q Consensus 203 anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~ 241 (452)
.+++||.+||.++.+.|..|..+++++|..|+|+.++..
T Consensus 72 ~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s 110 (232)
T 3id6_C 72 NPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFS 110 (232)
T ss_dssp CSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECC
T ss_pred cCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECc
Confidence 348999999999999999999999999999999999763
No 31
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=96.93 E-value=0.0051 Score=64.15 Aligned_cols=40 Identities=20% Similarity=0.253 Sum_probs=36.3
Q ss_pred HhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 201 SMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 201 ~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.+.++.+|.+||-+..+.|..|.+++++|++.|.|+.++.
T Consensus 99 ~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDi 138 (456)
T 3m4x_A 99 TAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEI 138 (456)
T ss_dssp HHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECS
T ss_pred HHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeC
Confidence 3458899999999999999999999999999999999876
No 32
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=96.88 E-value=0.0043 Score=61.14 Aligned_cols=38 Identities=8% Similarity=0.055 Sum_probs=32.8
Q ss_pred hcCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeC
Q 012978 350 ENGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQ 387 (452)
Q Consensus 350 ~~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp 387 (452)
.+.||.+++++-..++..++..+...|+|+|.||+-..
T Consensus 186 d~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 186 GLEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp GCCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CCCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 46899999887545788999999999999999998764
No 33
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=96.87 E-value=0.0021 Score=58.88 Aligned_cols=50 Identities=14% Similarity=-0.023 Sum_probs=37.8
Q ss_pred cchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 191 LRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 191 lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
++.++...+-.++...++.+||.++++.|..+.+++.+++..++|+.++.
T Consensus 40 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~ 89 (210)
T 3c3p_A 40 VDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDP 89 (210)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEES
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEEC
Confidence 44444444434445557899999999999999999999876688988876
No 34
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=96.78 E-value=0.002 Score=59.94 Aligned_cols=50 Identities=18% Similarity=0.147 Sum_probs=43.0
Q ss_pred ccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 190 FLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 190 ~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.++......+..++.+.++.+||.++.+.|.++.+++++++ .++|+.++.
T Consensus 37 ~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~ 86 (233)
T 2gpy_A 37 IMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALP-EATIVSIER 86 (233)
T ss_dssp CCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECC
T ss_pred CcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEEC
Confidence 56777778888888888999999999999999999999985 468888865
No 35
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=96.69 E-value=0.0098 Score=57.21 Aligned_cols=45 Identities=20% Similarity=0.122 Sum_probs=38.2
Q ss_pred HHHHH-HhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 196 LSLLL-SMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 196 La~iL-~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.++++ .+.++.+|.+||.++.+.|..+..+++++++.|.|+.++.
T Consensus 71 ~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~ 116 (274)
T 3ajd_A 71 SSMIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEI 116 (274)
T ss_dssp GGGHHHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEES
T ss_pred HHHHHHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECC
Confidence 44443 3458899999999999999999999999998899999876
No 36
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=96.63 E-value=0.0041 Score=55.05 Aligned_cols=60 Identities=10% Similarity=0.042 Sum_probs=44.5
Q ss_pred hcCcceEEEeCCCCC----hHHHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhccCccceeee
Q 012978 350 ENGFSSMIVVAPELD----PWSFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRKMAIGLQIS 411 (452)
Q Consensus 350 ~~~~D~liia~~~~d----P~~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~~~v~l~l~ 411 (452)
.+.||.++...+.+. +..++..+...|+|+|.+++.++..+...++...|++. |-.+++.
T Consensus 117 ~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~--~~~~~~~ 180 (194)
T 1dus_A 117 DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDV--FGNVETV 180 (194)
T ss_dssp TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHH--HSCCEEE
T ss_pred cCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHH--hcceEEE
Confidence 357997777554221 35788999999999999999999998888888888753 5444443
No 37
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=96.63 E-value=0.0046 Score=57.91 Aligned_cols=55 Identities=9% Similarity=-0.026 Sum_probs=44.6
Q ss_pred CcccccccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 184 NPARIGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 184 dp~Ki~~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+...-.-+..+.+..++...++.+|.+||.++.+.|.++.+++.+.|. .|+.+..
T Consensus 13 ~~~~~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~--~v~gvD~ 67 (256)
T 1nkv_A 13 EHRIHNPFTEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGI--TGTGIDM 67 (256)
T ss_dssp SCSSSSSCCHHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCC--EEEEEES
T ss_pred CccccCCCCHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCC--eEEEEeC
Confidence 333445567778899999999999999999999999999999999853 5666654
No 38
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=96.47 E-value=0.0059 Score=57.75 Aligned_cols=66 Identities=14% Similarity=-0.019 Sum_probs=43.9
Q ss_pred CcceEEEeCCCCC--hHHHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhccCccce--eeeeeeeeeeeec
Q 012978 352 GFSSMIVVAPELD--PWSFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRKMAIGL--QISEPWLREYQVL 421 (452)
Q Consensus 352 ~~D~liia~~~~d--P~~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~~~v~l--~l~E~~lR~yQVL 421 (452)
.||.++|+- .-- -+.+++.....|++++.||+ +|. ....++..+|... +|.-+ .+.+---|-|.|+
T Consensus 84 ~~D~IviaG-~Gg~~i~~Il~~~~~~L~~~~~lVl-q~~-~~~~~vr~~L~~~-Gf~i~~e~lv~e~~~~Yeii 153 (225)
T 3kr9_A 84 QVSVITIAG-MGGRLIARILEEGLGKLANVERLIL-QPN-NREDDLRIWLQDH-GFQIVAESILEEAGKFYEIL 153 (225)
T ss_dssp CCCEEEEEE-ECHHHHHHHHHHTGGGCTTCCEEEE-EES-SCHHHHHHHHHHT-TEEEEEEEEEEETTEEEEEE
T ss_pred CCCEEEEcC-CChHHHHHHHHHHHHHhCCCCEEEE-ECC-CCHHHHHHHHHHC-CCEEEEEEEEEECCEEEEEE
Confidence 599888864 222 26889999999999877766 665 4667888888765 45433 3333333556665
No 39
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=96.47 E-value=0.062 Score=46.20 Aligned_cols=46 Identities=17% Similarity=0.204 Sum_probs=37.6
Q ss_pred HHHHHHhcC-CCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecC
Q 012978 196 LSLLLSMGN-VAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIG 241 (452)
Q Consensus 196 La~iL~~an-I~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~ 241 (452)
+..++...+ +.+|.+||.++.+.|.++.+++.++|..+.++.++..
T Consensus 10 l~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~ 56 (180)
T 1ej0_A 10 LDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLL 56 (180)
T ss_dssp HHHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESS
T ss_pred HHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECc
Confidence 444555544 7899999999999999999999999877888888764
No 40
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=96.42 E-value=0.0039 Score=58.10 Aligned_cols=44 Identities=18% Similarity=0.241 Sum_probs=38.1
Q ss_pred HHHH---HHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 196 LSLL---LSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 196 La~i---L~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
++.+ +...++.+|.+||.++.+.|.++..++.+.| .|.|+.++.
T Consensus 60 ~~~i~~~l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~ 106 (230)
T 1fbn_A 60 AAAIIKGLKVMPIKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEY 106 (230)
T ss_dssp HHHHHTTCCCCCCCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEES
T ss_pred HHHHHhcccccCCCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEEC
Confidence 4566 6667888999999999999999999999987 789998876
No 41
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=96.41 E-value=0.014 Score=61.07 Aligned_cols=40 Identities=25% Similarity=0.310 Sum_probs=36.4
Q ss_pred HhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 201 SMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 201 ~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.+.++.+|.+||-+..+.|..|.+++++|++.|.|+.++.
T Consensus 95 ~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDi 134 (464)
T 3m6w_A 95 VLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEV 134 (464)
T ss_dssp HHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECS
T ss_pred HhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEEC
Confidence 4558899999999999999999999999999999998876
No 42
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=96.39 E-value=0.012 Score=54.26 Aligned_cols=38 Identities=8% Similarity=-0.004 Sum_probs=32.1
Q ss_pred HhcCCCCCCeEEEEeCC-CcHHHHHHHHHhCCCceEEEeec
Q 012978 201 SMGNVAANSDVLVVDMA-GGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 201 ~~anI~~g~rvLv~d~~-~GlltaAv~ermgg~G~v~~~~~ 240 (452)
...-+.+|.+||.++.+ .|.++.+++.+. .+.|+.++.
T Consensus 49 ~~~~~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~ 87 (230)
T 3evz_A 49 LKTFLRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEV 87 (230)
T ss_dssp HHTTCCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEEC
T ss_pred hHhhcCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEEC
Confidence 44557899999999999 999999999987 457888876
No 43
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=96.39 E-value=0.032 Score=50.10 Aligned_cols=43 Identities=12% Similarity=0.051 Sum_probs=32.8
Q ss_pred HHHHhcCC-CCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecC
Q 012978 198 LLLSMGNV-AANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIG 241 (452)
Q Consensus 198 ~iL~~anI-~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~ 241 (452)
.++..... .++.+||.++.+.|.++.+++.+. ..+.++.++..
T Consensus 20 ~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~ 63 (215)
T 4dzr_A 20 EAIRFLKRMPSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLS 63 (215)
T ss_dssp HHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC
T ss_pred HHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECC
Confidence 34444343 789999999999999999999984 44578887763
No 44
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=96.34 E-value=0.0045 Score=57.21 Aligned_cols=44 Identities=18% Similarity=0.258 Sum_probs=37.7
Q ss_pred HHH---HHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 197 SLL---LSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 197 a~i---L~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+.| +...++.+|.+||.++.+.|.++.+++.++|+.|+|+.++.
T Consensus 60 ~~i~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~ 106 (227)
T 1g8a_A 60 AAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEF 106 (227)
T ss_dssp HHHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEES
T ss_pred HHHHhhHHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEEC
Confidence 555 44456889999999999999999999999988889998865
No 45
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=96.28 E-value=0.049 Score=53.11 Aligned_cols=58 Identities=14% Similarity=0.148 Sum_probs=41.2
Q ss_pred cCcceEEEeCCCCCh----------HHHHHhHHhcccCCCcEEEEe--CC--hHHHHHHHHHHHhccCccceeeee
Q 012978 351 NGFSSMIVVAPELDP----------WSFVKDLLPLLSYSAPFAIYH--QY--LQPLATCMHSLQVRKMAIGLQISE 412 (452)
Q Consensus 351 ~~~D~liia~~~~dP----------~~il~~ll~~L~pS~p~VVYs--p~--~epL~e~~~~L~~~~~~v~l~l~E 412 (452)
+.||.+|++.+ +| ..++..+...|+|+|.||+.+ |+ .+.+.++...|++. |-.+.+..
T Consensus 162 ~~fD~Ii~d~~--~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~--F~~v~~~~ 233 (296)
T 1inl_A 162 NEFDVIIIDST--DPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKV--FPITRVYL 233 (296)
T ss_dssp SCEEEEEEEC------------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHH--CSEEEEEE
T ss_pred CCceEEEEcCC--CcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHH--CCceEEEE
Confidence 57999888875 56 578999999999999999874 43 35567777888754 55554443
No 46
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=96.28 E-value=0.011 Score=54.93 Aligned_cols=61 Identities=15% Similarity=0.239 Sum_probs=46.6
Q ss_pred hhhcCcceEEEeCCCCChH-------------HHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhccCccceee
Q 012978 348 WKENGFSSMIVVAPELDPW-------------SFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRKMAIGLQI 410 (452)
Q Consensus 348 ~~~~~~D~liia~~~~dP~-------------~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~~~v~l~l 410 (452)
+..+.||.+++..| +|| .++..+...|+|+|.|++-+....-..++...+.....|.++..
T Consensus 101 ~~~~~~d~v~~~~~--~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~~~~~~~~~~ 174 (218)
T 3dxy_A 101 IPDNSLRMVQLFFP--DPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSIDGYKNLSE 174 (218)
T ss_dssp SCTTCEEEEEEESC--CCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTSTTEEECCT
T ss_pred cCCCChheEEEeCC--CCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHhCCCcccccC
Confidence 34578999888754 675 48999999999999999999887666667777776666665544
No 47
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=96.25 E-value=0.032 Score=50.71 Aligned_cols=57 Identities=18% Similarity=0.239 Sum_probs=45.4
Q ss_pred HhcCcccccccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 181 FKKNPARIGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 181 ~~Kdp~Ki~~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
|..+|.+...... ..++...++.+|.+||.++.+.|.++.+++.+.+..+.|+.+..
T Consensus 14 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~ 70 (219)
T 3dh0_A 14 KLDDPSRLELFDP---EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDV 70 (219)
T ss_dssp GTSCGGGGGTCCH---HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEES
T ss_pred hhcCHhhccccCH---HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEEC
Confidence 4455666555554 45666668999999999999999999999999888888988875
No 48
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=96.24 E-value=0.012 Score=55.36 Aligned_cols=53 Identities=11% Similarity=-0.021 Sum_probs=43.1
Q ss_pred ccc-hhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHH---hCCCceEEEeecCC
Q 012978 190 FLR-VDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAER---LGGTGYVCNTCIGD 242 (452)
Q Consensus 190 ~lR-~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~er---mgg~G~v~~~~~~~ 242 (452)
.++ +++...|..+....++.+||.+++++|.++..++++ ++..|+|+.++...
T Consensus 63 ~~~~p~~~~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~ 119 (236)
T 2bm8_A 63 MLKDPDTQAVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDL 119 (236)
T ss_dssp CCSCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCC
T ss_pred ccCCHHHHHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCCh
Confidence 345 666677766666667899999999999999999998 67888999998743
No 49
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=96.19 E-value=0.014 Score=51.72 Aligned_cols=74 Identities=7% Similarity=0.004 Sum_probs=50.6
Q ss_pred cCcceEEEeCCCCC-------------hHHHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhccCccceeeeee---e
Q 012978 351 NGFSSMIVVAPELD-------------PWSFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRKMAIGLQISEP---W 414 (452)
Q Consensus 351 ~~~D~liia~~~~d-------------P~~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~~~v~l~l~E~---~ 414 (452)
+.||.++...+ +. ...++..++..| |+|.+++..+......++...|+.. +|-...+.+. +
T Consensus 77 ~~fD~i~~n~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~-gf~~~~~~~~~~~~ 153 (170)
T 3q87_B 77 ESVDVVVFNPP-YVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEER-GYGTRILKVRKILG 153 (170)
T ss_dssp GGCSEEEECCC-CBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHT-TCEEEEEEEEECSS
T ss_pred CCCCEEEECCC-CccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHC-CCcEEEEEeeccCC
Confidence 46786665433 33 467888999888 9999999888777778888888764 4665555543 3
Q ss_pred eeeeeecCCCCCC
Q 012978 415 LREYQVLPSRTHP 427 (452)
Q Consensus 415 lR~yQVLP~RTHP 427 (452)
-|-|.+-..+.|-
T Consensus 154 e~~~~~~~~~~~~ 166 (170)
T 3q87_B 154 ETVYIIKGEKSHH 166 (170)
T ss_dssp SEEEEEEEECC--
T ss_pred ceEEEEEEecccc
Confidence 4666666666664
No 50
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=96.19 E-value=0.0042 Score=57.33 Aligned_cols=50 Identities=22% Similarity=0.170 Sum_probs=42.9
Q ss_pred cchhHHHHHHHhc--CCCCCCeEEEEeCCCcHHHHHHHHHhC----CCceEEEeec
Q 012978 191 LRVDMLSLLLSMG--NVAANSDVLVVDMAGGLLTGAVAERLG----GTGYVCNTCI 240 (452)
Q Consensus 191 lR~DtLa~iL~~a--nI~~g~rvLv~d~~~GlltaAv~ermg----g~G~v~~~~~ 240 (452)
.++.+.+.++.+. .+.+|.+||.++.+.|.++..++++++ ..+.|+.++.
T Consensus 62 ~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~ 117 (227)
T 2pbf_A 62 SAPHMHALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLER 117 (227)
T ss_dssp CCHHHHHHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEES
T ss_pred CChHHHHHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeC
Confidence 4566777887777 699999999999999999999999987 6788998876
No 51
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=96.14 E-value=0.0094 Score=57.66 Aligned_cols=45 Identities=13% Similarity=0.038 Sum_probs=39.1
Q ss_pred hHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 194 DMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 194 DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+..++...++.+|.+||.++.+.|.++..++++.| ..|+.+..
T Consensus 59 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~ 103 (302)
T 3hem_A 59 AKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTL 103 (302)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEEC
T ss_pred HHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEEC
Confidence 3567789999999999999999999999999999987 57777765
No 52
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=96.09 E-value=0.0092 Score=55.47 Aligned_cols=41 Identities=20% Similarity=0.292 Sum_probs=36.6
Q ss_pred HHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 200 LSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 200 L~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+...++.+|.+||.++.+.|.++..++.+.|+.|+|+.++.
T Consensus 70 l~~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~ 110 (233)
T 2ipx_A 70 VDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEF 110 (233)
T ss_dssp CSCCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECC
T ss_pred HheecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEEC
Confidence 34678899999999999999999999999988889998865
No 53
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=96.07 E-value=0.0086 Score=55.42 Aligned_cols=37 Identities=16% Similarity=0.226 Sum_probs=33.4
Q ss_pred cCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 203 GNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 203 anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.++.+|++||.++.+.|.++..++.++| .|.|+.++.
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~ 89 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEY 89 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECC
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEEC
Confidence 5688999999999999999999999887 789998876
No 54
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=96.05 E-value=0.014 Score=56.27 Aligned_cols=51 Identities=6% Similarity=-0.007 Sum_probs=43.4
Q ss_pred cCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeCCh-----HHHHHHHHHHHhc
Q 012978 351 NGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQYL-----QPLATCMHSLQVR 402 (452)
Q Consensus 351 ~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp~~-----epL~e~~~~L~~~ 402 (452)
+.||.+|++.| .++..++..++..|+|+|.++++|... +++.+....+...
T Consensus 185 ~~~D~Vi~d~p-~~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~ 240 (272)
T 3a27_A 185 DVADRVIMGYV-HKTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEK 240 (272)
T ss_dssp TCEEEEEECCC-SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHH
T ss_pred CCceEEEECCc-ccHHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHH
Confidence 47998888876 478999999999999999999999887 7888888888753
No 55
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=96.00 E-value=0.0068 Score=54.95 Aligned_cols=60 Identities=8% Similarity=-0.108 Sum_probs=42.3
Q ss_pred cCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhccCccceeee
Q 012978 351 NGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRKMAIGLQIS 411 (452)
Q Consensus 351 ~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~~~v~l~l~ 411 (452)
+.||.++...+.++...++..+...|+|+|.+++.....+...++...++.. +|..+.+.
T Consensus 124 ~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~-Gf~~~~~~ 183 (205)
T 3grz_A 124 GKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAEN-SFQIDLKM 183 (205)
T ss_dssp SCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHT-TEEEEEEE
T ss_pred CCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHc-CCceEEee
Confidence 5799777765433345668888899999999998766666777777777754 46555443
No 56
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=95.99 E-value=0.036 Score=54.26 Aligned_cols=60 Identities=17% Similarity=0.221 Sum_probs=42.0
Q ss_pred hcCcceEEEeCCCCChH---------HHHHhHHhcccCCCcEEEEeCCh----HHHHHHHHHHHhccCccceeeee
Q 012978 350 ENGFSSMIVVAPELDPW---------SFVKDLLPLLSYSAPFAIYHQYL----QPLATCMHSLQVRKMAIGLQISE 412 (452)
Q Consensus 350 ~~~~D~liia~~~~dP~---------~il~~ll~~L~pS~p~VVYsp~~----epL~e~~~~L~~~~~~v~l~l~E 412 (452)
.+.||.+|++.+ +|+ .++..+...|+|+|.|++.++.. ..+.++...|+.. +|-.+.+..
T Consensus 167 ~~~fDvIi~d~~--~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~-GF~~v~~~~ 239 (304)
T 3bwc_A 167 DNTYDVVIIDTT--DPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRET-GFASVQYAL 239 (304)
T ss_dssp TTCEEEEEEECC-----------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHH-TCSEEEEEE
T ss_pred CCceeEEEECCC--CccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhC-CCCcEEEEE
Confidence 467999888874 443 77899999999999999986542 4566777777764 366555443
No 57
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=95.98 E-value=0.0083 Score=54.72 Aligned_cols=50 Identities=18% Similarity=0.282 Sum_probs=44.5
Q ss_pred cchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 191 LRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 191 lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+..++.++.++.+.+|.+||.++.+.|.++..++.+.|..++|+.++.
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~ 110 (215)
T 2yxe_A 61 SAIHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIER 110 (215)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEES
T ss_pred CcHHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeC
Confidence 45677888999999999999999999999999999999887788888875
No 58
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=95.97 E-value=0.019 Score=54.89 Aligned_cols=46 Identities=15% Similarity=0.114 Sum_probs=38.4
Q ss_pred hhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 193 VDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 193 ~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
...+..++...++.+|.+||.++.+.|.++..++++.|. .|+.+..
T Consensus 50 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~--~v~gvd~ 95 (287)
T 1kpg_A 50 IAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDV--NVVGLTL 95 (287)
T ss_dssp HHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCC--EEEEEES
T ss_pred HHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCC--EEEEEEC
Confidence 344677888899999999999999999999999988864 6776654
No 59
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=95.89 E-value=0.022 Score=53.90 Aligned_cols=45 Identities=13% Similarity=0.273 Sum_probs=35.2
Q ss_pred hhHHHHHHHhcCCC-CCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 193 VDMLSLLLSMGNVA-ANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 193 ~DtLa~iL~~anI~-~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.|++ .+..++.+. +|.+||.++++.|.++..++.+. .+.|+.++.
T Consensus 35 ~d~~-ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~--~~~v~gvDi 80 (259)
T 3lpm_A 35 IDAV-LLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRT--KAKIVGVEI 80 (259)
T ss_dssp HHHH-HHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTC--CCEEEEECC
T ss_pred HHHH-HHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhc--CCcEEEEEC
Confidence 4432 455667888 99999999999999999999883 237887765
No 60
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=95.88 E-value=0.019 Score=56.70 Aligned_cols=45 Identities=22% Similarity=0.134 Sum_probs=38.9
Q ss_pred HHHHHH-hcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 196 LSLLLS-MGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 196 La~iL~-~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
-|+++. +.++.+|.+||-+..+.|-.|..++++|++.|.|+.++.
T Consensus 90 ~s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~ 135 (309)
T 2b9e_A 90 ASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDL 135 (309)
T ss_dssp GGGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEES
T ss_pred HHHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeC
Confidence 444443 568999999999999999999999999999999999986
No 61
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=95.84 E-value=0.016 Score=60.03 Aligned_cols=48 Identities=19% Similarity=0.119 Sum_probs=40.5
Q ss_pred hhHHHHHHH-hcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 193 VDMLSLLLS-MGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 193 ~DtLa~iL~-~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.|.-++++. +.++.+|.+||.++.+.|..|..+++++++.|.|+.++.
T Consensus 244 qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~ 292 (450)
T 2yxl_A 244 QEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDV 292 (450)
T ss_dssp CCHHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECS
T ss_pred cCchhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcC
Confidence 355566544 468999999999999999999999999988899998876
No 62
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=95.84 E-value=0.017 Score=56.20 Aligned_cols=46 Identities=15% Similarity=0.112 Sum_probs=38.5
Q ss_pred hhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 193 VDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 193 ~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
...+..++...++.+|.+||.++.+.|.++..++++.|. .|+.+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~--~v~gvD~ 121 (318)
T 2fk8_A 76 YAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDV--NVIGLTL 121 (318)
T ss_dssp HHHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCC--EEEEEES
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCC--EEEEEEC
Confidence 345678888899999999999999999999999998854 6776654
No 63
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=95.77 E-value=0.017 Score=60.45 Aligned_cols=48 Identities=21% Similarity=0.182 Sum_probs=40.1
Q ss_pred hhHHHHHH-HhcCCC--CCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 193 VDMLSLLL-SMGNVA--ANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 193 ~DtLa~iL-~~anI~--~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.|.-|+++ ...++. +|.+||.+..+.|..|..++++|++.|.|+.++.
T Consensus 100 Qd~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDi 150 (479)
T 2frx_A 100 QEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEF 150 (479)
T ss_dssp CCHHHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECS
T ss_pred ECHHHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEEC
Confidence 34456654 355777 9999999999999999999999999999999876
No 64
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=95.74 E-value=0.0088 Score=55.74 Aligned_cols=48 Identities=17% Similarity=0.238 Sum_probs=42.4
Q ss_pred cchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 191 LRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 191 lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+...+.++.+.++.+|.+||.++.+.|.++..++++.+ ++|+.++.
T Consensus 75 ~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~ 122 (235)
T 1jg1_A 75 SAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK--TDVYTIER 122 (235)
T ss_dssp CCHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEES
T ss_pred ccHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeC
Confidence 4567788899999999999999999999999999999886 78888875
No 65
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=95.64 E-value=0.11 Score=50.06 Aligned_cols=50 Identities=18% Similarity=0.340 Sum_probs=36.9
Q ss_pred hcCcceEEEeCCCCCh---------HHHHHhHHhcccCCCcEEEEe--CC--hHHHHHHHHHHHh
Q 012978 350 ENGFSSMIVVAPELDP---------WSFVKDLLPLLSYSAPFAIYH--QY--LQPLATCMHSLQV 401 (452)
Q Consensus 350 ~~~~D~liia~~~~dP---------~~il~~ll~~L~pS~p~VVYs--p~--~epL~e~~~~L~~ 401 (452)
.+.||.+|++.+ +| ..++..+...|+|+|.|++.+ |+ .+.+.++...|+.
T Consensus 150 ~~~fD~Ii~d~~--~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~ 212 (281)
T 1mjf_A 150 NRGFDVIIADST--DPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKK 212 (281)
T ss_dssp CCCEEEEEEECC--CCC-----TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHH
T ss_pred cCCeeEEEECCC--CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHH
Confidence 467999999875 43 567899999999999999875 43 3445566666654
No 66
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=95.62 E-value=0.0099 Score=54.72 Aligned_cols=49 Identities=24% Similarity=0.241 Sum_probs=41.7
Q ss_pred chhHHHHHHHhcC--CCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 192 RVDMLSLLLSMGN--VAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 192 R~DtLa~iL~~an--I~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.+...+.++.+.. +.+|.+||.++.+.|.++..+++++|..|.|+.++.
T Consensus 60 ~p~~~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~ 110 (226)
T 1i1n_A 60 APHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDH 110 (226)
T ss_dssp CHHHHHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEES
T ss_pred CHHHHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeC
Confidence 3455667777765 899999999999999999999999988889998876
No 67
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=95.62 E-value=0.069 Score=49.76 Aligned_cols=51 Identities=12% Similarity=0.093 Sum_probs=39.6
Q ss_pred cCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeC--ChHHHHHHHHHHHhc
Q 012978 351 NGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQ--YLQPLATCMHSLQVR 402 (452)
Q Consensus 351 ~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp--~~epL~e~~~~L~~~ 402 (452)
+.||.++... ..++..++..+.++|+|+|.|+++.. +.+.+.++...++..
T Consensus 140 ~~fD~V~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~ 192 (240)
T 1xdz_A 140 ESYDIVTARA-VARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTL 192 (240)
T ss_dssp TCEEEEEEEC-CSCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHT
T ss_pred CCccEEEEec-cCCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHc
Confidence 5799888776 46789999999999999999998853 345566677777654
No 68
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=95.57 E-value=0.11 Score=46.11 Aligned_cols=40 Identities=15% Similarity=0.181 Sum_probs=34.0
Q ss_pred hcCCCCCCeEEEEeCCCcHHHHHHHHHhCCC--------ceEEEeecC
Q 012978 202 MGNVAANSDVLVVDMAGGLLTGAVAERLGGT--------GYVCNTCIG 241 (452)
Q Consensus 202 ~anI~~g~rvLv~d~~~GlltaAv~ermgg~--------G~v~~~~~~ 241 (452)
+..+++|.+||.++.+.|.++.+++.++|.. +.|+.+...
T Consensus 17 ~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s 64 (196)
T 2nyu_A 17 HQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLL 64 (196)
T ss_dssp HCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSS
T ss_pred cCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEech
Confidence 3447899999999999999999999999865 788888654
No 69
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=95.57 E-value=0.049 Score=51.71 Aligned_cols=51 Identities=16% Similarity=0.133 Sum_probs=39.5
Q ss_pred cCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeC--ChHHHHHHHHHHHhc
Q 012978 351 NGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQ--YLQPLATCMHSLQVR 402 (452)
Q Consensus 351 ~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp--~~epL~e~~~~L~~~ 402 (452)
+.||.++.-+ ..+...++..+.++|+|+|.|+++.. +.+.+.++..+++..
T Consensus 150 ~~fD~I~s~a-~~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~ 202 (249)
T 3g89_A 150 EAYARAVARA-VAPLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERL 202 (249)
T ss_dssp TCEEEEEEES-SCCHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHH
T ss_pred CCceEEEECC-cCCHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHc
Confidence 5799777654 34567788999999999999999875 567777777777653
No 70
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=95.53 E-value=0.1 Score=47.58 Aligned_cols=58 Identities=10% Similarity=0.179 Sum_probs=42.4
Q ss_pred hcCcceEEEeCCCCChH-------------HHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhccCccceee
Q 012978 350 ENGFSSMIVVAPELDPW-------------SFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRKMAIGLQI 410 (452)
Q Consensus 350 ~~~~D~liia~~~~dP~-------------~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~~~v~l~l 410 (452)
.+.||.+++..+ +|| .++..+...|+|+|.|++.+........+...|...+ |..+.+
T Consensus 109 ~~~~D~i~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g-~~~~~~ 179 (214)
T 1yzh_A 109 DGEIDRLYLNFS--DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYG-MKLNGV 179 (214)
T ss_dssp TTCCSEEEEESC--CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHT-CEEEEE
T ss_pred CCCCCEEEEECC--CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCC-Ceeeec
Confidence 357998888754 664 6899999999999999999977665556666666543 544433
No 71
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=95.52 E-value=0.05 Score=52.26 Aligned_cols=49 Identities=10% Similarity=0.212 Sum_probs=37.4
Q ss_pred cCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEE--eCChH--HHHHHHHHHHh
Q 012978 351 NGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIY--HQYLQ--PLATCMHSLQV 401 (452)
Q Consensus 351 ~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVY--sp~~e--pL~e~~~~L~~ 401 (452)
+.||.+|+++. +|...+..+...|+|+|.||+. +|+.. .+......++.
T Consensus 138 ~~fD~Ii~d~~--dp~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~ 190 (262)
T 2cmg_A 138 KKYDLIFCLQE--PDIHRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGG 190 (262)
T ss_dssp CCEEEEEESSC--CCHHHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHT
T ss_pred hhCCEEEECCC--ChHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHH
Confidence 57998888864 8999999999999999999986 45432 34555556653
No 72
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=95.50 E-value=0.034 Score=52.99 Aligned_cols=46 Identities=24% Similarity=0.145 Sum_probs=37.0
Q ss_pred hhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 193 VDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 193 ~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.|++ .+..++.+.++.+||.++++.|.++..++.+.. .+.|+.++.
T Consensus 23 ~D~~-lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi 68 (260)
T 2ozv_A 23 MDAM-LLASLVADDRACRIADLGAGAGAAGMAVAARLE-KAEVTLYER 68 (260)
T ss_dssp CHHH-HHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEES
T ss_pred cHHH-HHHHHhcccCCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEEC
Confidence 4544 455678899999999999999999999999863 357887776
No 73
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=95.50 E-value=0.012 Score=53.42 Aligned_cols=47 Identities=19% Similarity=0.228 Sum_probs=41.2
Q ss_pred cchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 191 LRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 191 lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+...+.++.+.++.+|.+||.++.+.|.++..++.+ .++|+.++.
T Consensus 61 ~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~ 107 (210)
T 3lbf_A 61 SQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVER 107 (210)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEES
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEec
Confidence 36778899999999999999999999999999999998 357888765
No 74
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=95.50 E-value=0.039 Score=51.47 Aligned_cols=50 Identities=12% Similarity=0.078 Sum_probs=39.5
Q ss_pred cccchhHHHHHHHhc-CCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 189 GFLRVDMLSLLLSMG-NVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 189 ~~lR~DtLa~iL~~a-nI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.......+..++.+. ++.+|.+||.++.+.|.++..++++.++ .|+.+..
T Consensus 27 ~~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~--~v~~vD~ 77 (257)
T 3f4k_A 27 GPGSPEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKG--QITGIDL 77 (257)
T ss_dssp SSCCHHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCS--EEEEEES
T ss_pred CCCCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCC--eEEEEEC
Confidence 344455666666665 7899999999999999999999998753 7887765
No 75
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=95.48 E-value=0.025 Score=53.30 Aligned_cols=59 Identities=10% Similarity=0.160 Sum_probs=45.2
Q ss_pred hhhcCcceEEEeCCCCChH-------------HHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhccCccce
Q 012978 348 WKENGFSSMIVVAPELDPW-------------SFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRKMAIGL 408 (452)
Q Consensus 348 ~~~~~~D~liia~~~~dP~-------------~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~~~v~l 408 (452)
+..+.||.+++..+ +|| .++..+...|+|+|.|++-+....-...+...|...+.|..+
T Consensus 119 ~~~~~~D~v~~~~~--dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~~~f~~~ 190 (235)
T 3ckk_A 119 FYKGQLTKMFFLFP--DPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHPLFERV 190 (235)
T ss_dssp CCTTCEEEEEEESC--C-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTSTTEEEE
T ss_pred CCCcCeeEEEEeCC--CchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHCCCcccc
Confidence 33568999888765 888 689999999999999999999877777777778776655443
No 76
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=95.42 E-value=0.065 Score=50.79 Aligned_cols=62 Identities=5% Similarity=-0.175 Sum_probs=43.0
Q ss_pred hhhcCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhccCccceee
Q 012978 348 WKENGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRKMAIGLQI 410 (452)
Q Consensus 348 ~~~~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~~~v~l~l 410 (452)
+..+.||.++.....+....++..+...|+|+|.+++...+.++..++...|+.. +|..+++
T Consensus 180 ~~~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~-Gf~~~~~ 241 (254)
T 2nxc_A 180 LPFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGA-GFRPLEE 241 (254)
T ss_dssp GGGCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHT-TCEEEEE
T ss_pred CcCCCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHC-CCEEEEE
Confidence 3346799666554322235678889999999999998777777777777777764 3544443
No 77
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=95.35 E-value=0.011 Score=54.59 Aligned_cols=49 Identities=14% Similarity=0.144 Sum_probs=41.5
Q ss_pred chhHHHHHHHhc--CCCCCCeEEEEeCCCcHHHHHHHHHhCC-----CceEEEeec
Q 012978 192 RVDMLSLLLSMG--NVAANSDVLVVDMAGGLLTGAVAERLGG-----TGYVCNTCI 240 (452)
Q Consensus 192 R~DtLa~iL~~a--nI~~g~rvLv~d~~~GlltaAv~ermgg-----~G~v~~~~~ 240 (452)
.+...+.++.+. .+.+|.+||.++.+.|.++..+++++|. .|.|+.++.
T Consensus 67 ~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~ 122 (227)
T 1r18_A 67 APHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEH 122 (227)
T ss_dssp CHHHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEES
T ss_pred ChHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEc
Confidence 556677788777 6899999999999999999999999875 578888875
No 78
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=95.34 E-value=0.28 Score=44.94 Aligned_cols=59 Identities=10% Similarity=0.185 Sum_probs=42.9
Q ss_pred hhhcCcceEEEeCCCCChH-------------HHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhccCcccee
Q 012978 348 WKENGFSSMIVVAPELDPW-------------SFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRKMAIGLQ 409 (452)
Q Consensus 348 ~~~~~~D~liia~~~~dP~-------------~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~~~v~l~ 409 (452)
+..+.||.+++..+ +|| .++..+...|+|+|.|++-+........+...|...+ |-.+.
T Consensus 104 ~~~~~~d~v~~~~~--~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g-~~~~~ 175 (213)
T 2fca_A 104 FEPGEVKRVYLNFS--DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYG-LLLTY 175 (213)
T ss_dssp CCTTSCCEEEEESC--CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHT-CEEEE
T ss_pred cCcCCcCEEEEECC--CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCC-Ccccc
Confidence 33567998887654 564 5799999999999999999988766666666676543 44333
No 79
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=95.19 E-value=0.04 Score=53.90 Aligned_cols=56 Identities=16% Similarity=0.181 Sum_probs=40.0
Q ss_pred cCcceEEEeCCCCCh---------HHHHHhHHhcccCCCcEEEEe--CCh--HHHHHHHHHHHhccCccceee
Q 012978 351 NGFSSMIVVAPELDP---------WSFVKDLLPLLSYSAPFAIYH--QYL--QPLATCMHSLQVRKMAIGLQI 410 (452)
Q Consensus 351 ~~~D~liia~~~~dP---------~~il~~ll~~L~pS~p~VVYs--p~~--epL~e~~~~L~~~~~~v~l~l 410 (452)
+.||.+|++++ +| .+.+..+...|+|+|.||+.+ |+. +.+.+++..|+.. |-.+..
T Consensus 156 ~~fDvIi~D~~--~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~--F~~v~~ 224 (294)
T 3adn_A 156 QTFDVIISDCT--DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHY--FSDVGF 224 (294)
T ss_dssp CCEEEEEECC------------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHH--CSEEEE
T ss_pred CCccEEEECCC--CccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHH--CCCeEE
Confidence 57998888764 56 678899999999999999875 333 5677778888753 544444
No 80
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=95.16 E-value=0.076 Score=51.14 Aligned_cols=57 Identities=12% Similarity=0.189 Sum_probs=42.5
Q ss_pred hcCcceEEEeCCCCCh---------HHHHHhHHhcccCCCcEEEEe--CC--hHHHHHHHHHHHhccCccceee
Q 012978 350 ENGFSSMIVVAPELDP---------WSFVKDLLPLLSYSAPFAIYH--QY--LQPLATCMHSLQVRKMAIGLQI 410 (452)
Q Consensus 350 ~~~~D~liia~~~~dP---------~~il~~ll~~L~pS~p~VVYs--p~--~epL~e~~~~L~~~~~~v~l~l 410 (452)
.+.||.+|++.+ +| .+++..+...|+|+|.||+.+ |+ .+.+.++...|++. |-++.+
T Consensus 146 ~~~fD~Ii~d~~--~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~--F~~v~~ 215 (275)
T 1iy9_A 146 ENQYDVIMVDST--EPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEI--FPITKL 215 (275)
T ss_dssp CSCEEEEEESCS--SCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT--CSEEEE
T ss_pred CCCeeEEEECCC--CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHh--CCCeEE
Confidence 357998888875 45 578999999999999999985 44 45567777888753 554443
No 81
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=95.10 E-value=0.27 Score=50.31 Aligned_cols=49 Identities=16% Similarity=-0.066 Sum_probs=40.0
Q ss_pred chhHHHHHHH-hcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecC
Q 012978 192 RVDMLSLLLS-MGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIG 241 (452)
Q Consensus 192 R~DtLa~iL~-~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~ 241 (452)
..|..++++. +.++.+|.+||.++.+.|..|..+++++++ |.|+.++..
T Consensus 230 ~qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~ 279 (429)
T 1sqg_A 230 VQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDID 279 (429)
T ss_dssp ECCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTT-CEEEEEESS
T ss_pred eeCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCC-CEEEEECCC
Confidence 3455666544 558999999999999999999999999865 899998764
No 82
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=95.05 E-value=0.062 Score=47.19 Aligned_cols=34 Identities=18% Similarity=0.026 Sum_probs=29.0
Q ss_pred CCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 205 VAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 205 I~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+.+|.+||.++.+.|.++.+++.+ |.+.|+.++.
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~--~~~~v~~vD~ 62 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSR--GMSAAVLVEK 62 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHT--TCCEEEEECC
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHc--CCCEEEEEEC
Confidence 678999999999999999999887 4568888765
No 83
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=95.00 E-value=0.19 Score=44.70 Aligned_cols=33 Identities=21% Similarity=0.089 Sum_probs=27.3
Q ss_pred CCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 206 AANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 206 ~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.+|.+||.++.+.|.++.+++.+ |.+.|+.++.
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~--~~~~v~~vD~ 75 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR--GAASVLFVES 75 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEEC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC--CCCeEEEEEC
Confidence 57899999999999999988775 4557888875
No 84
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=95.00 E-value=0.15 Score=48.12 Aligned_cols=42 Identities=19% Similarity=0.082 Sum_probs=33.9
Q ss_pred HHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 198 LLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 198 ~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.+.....+.+|.+||.++.+.|.++..++.+ ++.+.|+.++.
T Consensus 28 ~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~~v~~vD~ 69 (276)
T 3mgg_A 28 LLHHDTVYPPGAKVLEAGCGIGAQTVILAKN-NPDAEITSIDI 69 (276)
T ss_dssp HHHTTCCCCTTCEEEETTCTTSHHHHHHHHH-CTTSEEEEEES
T ss_pred HHhhcccCCCCCeEEEecCCCCHHHHHHHHh-CCCCEEEEEEC
Confidence 3444566789999999999999999999988 44568888865
No 85
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=94.99 E-value=0.086 Score=49.02 Aligned_cols=50 Identities=14% Similarity=0.010 Sum_probs=40.3
Q ss_pred ccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 190 FLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 190 ~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+......++...++.++.+||.++.+.|.++..++.+.. .+.|+.+..
T Consensus 16 ~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~ 65 (259)
T 2p35_A 16 DERTRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYG-VNVITGIDS 65 (259)
T ss_dssp CGGGHHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHC-TTSEEEEES
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEEC
Confidence 34455566788888899999999999999999999999873 357777765
No 86
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=94.95 E-value=0.28 Score=43.86 Aligned_cols=44 Identities=11% Similarity=0.062 Sum_probs=35.2
Q ss_pred hHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 194 DMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 194 DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.....++...++.++ +||.++.+.|.++.+++++ +.+.|+.+..
T Consensus 31 ~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~ 74 (219)
T 3dlc_A 31 IIAENIINRFGITAG-TCIDIGSGPGALSIALAKQ--SDFSIRALDF 74 (219)
T ss_dssp HHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHH--SEEEEEEEES
T ss_pred HHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHc--CCCeEEEEEC
Confidence 345677777788887 9999999999999999998 3357777765
No 87
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=94.89 E-value=0.13 Score=47.82 Aligned_cols=47 Identities=21% Similarity=0.124 Sum_probs=39.5
Q ss_pred chhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 192 RVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 192 R~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
....+..++...++.+|.+||.++.+.|.++..++.+.| ..|+.+..
T Consensus 40 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~~v~~vD~ 86 (266)
T 3ujc_A 40 GLEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYG--AHTHGIDI 86 (266)
T ss_dssp HHHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEES
T ss_pred hHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcC--CEEEEEeC
Confidence 345578888888999999999999999999999999983 46777765
No 88
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=94.81 E-value=0.072 Score=49.92 Aligned_cols=54 Identities=13% Similarity=0.161 Sum_probs=40.5
Q ss_pred hcCcceEEEeCCCCChH-------------HHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhccCc
Q 012978 350 ENGFSSMIVVAPELDPW-------------SFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRKMA 405 (452)
Q Consensus 350 ~~~~D~liia~~~~dP~-------------~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~~~ 405 (452)
.+.+|.+++..| +|| .++..+...|+|+|.|++.+...+-...+...+...+.|
T Consensus 126 ~~~~d~v~~~~p--~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~~ 192 (246)
T 2vdv_E 126 KGQLSKMFFCFP--DPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLEEHPLF 192 (246)
T ss_dssp TTCEEEEEEESC--CCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHHSTTE
T ss_pred ccccCEEEEECC--CcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHHhCcCe
Confidence 467898888765 787 799999999999999999888754444455566655433
No 89
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=94.74 E-value=0.097 Score=49.53 Aligned_cols=37 Identities=14% Similarity=0.061 Sum_probs=31.5
Q ss_pred CCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecC
Q 012978 204 NVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIG 241 (452)
Q Consensus 204 nI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~ 241 (452)
-|.+|.+|+.+++++|.++.+++.+ |..++|+.++..
T Consensus 18 ~v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~AvDi~ 54 (230)
T 3lec_A 18 YVPKGARLLDVGSDHAYLPIFLLQM-GYCDFAIAGEVV 54 (230)
T ss_dssp TSCTTEEEEEETCSTTHHHHHHHHT-TCEEEEEEEESS
T ss_pred hCCCCCEEEEECCchHHHHHHHHHh-CCCCEEEEEECC
Confidence 4678999999999999999999875 667789888764
No 90
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=94.74 E-value=0.19 Score=48.30 Aligned_cols=36 Identities=14% Similarity=0.043 Sum_probs=31.4
Q ss_pred CCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 205 VAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 205 I~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..++.+||.++.+.|.++..+++++++...|+.+..
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~ 69 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDL 69 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEES
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeC
Confidence 368999999999999999999998866678888866
No 91
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=94.61 E-value=0.056 Score=55.89 Aligned_cols=51 Identities=14% Similarity=0.008 Sum_probs=44.1
Q ss_pred ccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecC
Q 012978 190 FLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIG 241 (452)
Q Consensus 190 ~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~ 241 (452)
..-+..++.|+..+++.+|.+||.+++|.|.++..++.+.| .+.|+.++..
T Consensus 225 et~p~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis 275 (433)
T 1u2z_A 225 ELLPNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIM 275 (433)
T ss_dssp CBCHHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECC
T ss_pred cccHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCC
Confidence 34578899999999999999999999999999999999875 3578888763
No 92
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=94.60 E-value=0.059 Score=52.77 Aligned_cols=49 Identities=14% Similarity=0.255 Sum_probs=42.4
Q ss_pred chhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 192 RVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 192 R~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.+..++.++..+++.+|.+||.++.+.|.++..++++.+..|+|+.++.
T Consensus 60 ~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~ 108 (317)
T 1dl5_A 60 QPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEY 108 (317)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEES
T ss_pred CHHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEEC
Confidence 3466888999999999999999999999999999988654688998876
No 93
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=94.53 E-value=0.27 Score=47.42 Aligned_cols=56 Identities=13% Similarity=0.190 Sum_probs=40.1
Q ss_pred hcCcceEEEeCCCCCh---------HHHHHhHHhcccCCCcEEEEeC--C--hHHHHHHHHHHHhccCcccee
Q 012978 350 ENGFSSMIVVAPELDP---------WSFVKDLLPLLSYSAPFAIYHQ--Y--LQPLATCMHSLQVRKMAIGLQ 409 (452)
Q Consensus 350 ~~~~D~liia~~~~dP---------~~il~~ll~~L~pS~p~VVYsp--~--~epL~e~~~~L~~~~~~v~l~ 409 (452)
.+.||.+|++++ +| .+++..+...|+|+|.||+.+. + .+.+.++...|++. |-.+.
T Consensus 149 ~~~fD~Ii~d~~--~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~--F~~v~ 217 (283)
T 2i7c_A 149 TNTYDVIIVDSS--DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKL--FKKVE 217 (283)
T ss_dssp CSCEEEEEEECC--CTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT--CSEEE
T ss_pred CCCceEEEEcCC--CCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHH--CCceE
Confidence 467999998764 44 3788999999999999998853 3 34456667777653 54443
No 94
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=94.48 E-value=0.078 Score=49.96 Aligned_cols=51 Identities=20% Similarity=0.050 Sum_probs=40.6
Q ss_pred ccccchhHHHHHHHhcC-CCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 188 IGFLRVDMLSLLLSMGN-VAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 188 i~~lR~DtLa~iL~~an-I~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
......+.+..++.+.. +.+|.+||.++.+.|.++..++.+ +.+.|+.+..
T Consensus 26 ~~~~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~ 77 (267)
T 3kkz_A 26 QGPGSPEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDF 77 (267)
T ss_dssp SSSCCHHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEES
T ss_pred cCCCCHHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeC
Confidence 33445566677777766 889999999999999999999998 5568888865
No 95
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=94.46 E-value=0.31 Score=45.23 Aligned_cols=42 Identities=21% Similarity=0.025 Sum_probs=33.2
Q ss_pred HHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 197 SLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 197 a~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..++.+....+|.+||.++.+.|.++..++++ |. ..|+.+..
T Consensus 34 ~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~-~~-~~v~~vD~ 75 (253)
T 3g5l_A 34 HELKKMLPDFNQKTVLDLGCGFGWHCIYAAEH-GA-KKVLGIDL 75 (253)
T ss_dssp HHHHTTCCCCTTCEEEEETCTTCHHHHHHHHT-TC-SEEEEEES
T ss_pred HHHHHhhhccCCCEEEEECCCCCHHHHHHHHc-CC-CEEEEEEC
Confidence 45666667778999999999999999999887 33 37777765
No 96
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=94.36 E-value=0.12 Score=45.37 Aligned_cols=35 Identities=14% Similarity=-0.048 Sum_probs=28.3
Q ss_pred CCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 204 NVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 204 nI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
...+|.+||.++.+.|.++.+++.+ +.++|+.++.
T Consensus 41 ~~~~~~~vLD~GcG~G~~~~~~~~~--~~~~v~~vD~ 75 (187)
T 2fhp_A 41 PYFDGGMALDLYSGSGGLAIEAVSR--GMDKSICIEK 75 (187)
T ss_dssp SCCSSCEEEETTCTTCHHHHHHHHT--TCSEEEEEES
T ss_pred hhcCCCCEEEeCCccCHHHHHHHHc--CCCEEEEEEC
Confidence 4567899999999999999988874 3467888875
No 97
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=94.34 E-value=0.069 Score=48.65 Aligned_cols=48 Identities=17% Similarity=0.032 Sum_probs=36.2
Q ss_pred cccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecC
Q 012978 189 GFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIG 241 (452)
Q Consensus 189 ~~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~ 241 (452)
..+..+.+..+ ++.+|.+||.++.+.|.++..++++ ++.+.|+.++..
T Consensus 13 ~~~~~~~~~~l----~~~~~~~vLDiGcG~G~~~~~la~~-~p~~~v~gvD~s 60 (218)
T 3mq2_A 13 QEFSDAEFEQL----RSQYDDVVLDVGTGDGKHPYKVARQ-NPSRLVVALDAD 60 (218)
T ss_dssp EECCHHHHHHH----HTTSSEEEEEESCTTCHHHHHHHHH-CTTEEEEEEESC
T ss_pred cccCHHHHHHh----hccCCCEEEEecCCCCHHHHHHHHH-CCCCEEEEEECC
Confidence 34444444444 4788999999999999999999986 445688888763
No 98
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=94.34 E-value=0.055 Score=52.08 Aligned_cols=53 Identities=13% Similarity=0.095 Sum_probs=40.0
Q ss_pred hcCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeCC------hHHHHHHHHHHHhcc
Q 012978 350 ENGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQY------LQPLATCMHSLQVRK 403 (452)
Q Consensus 350 ~~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp~------~epL~e~~~~L~~~~ 403 (452)
.+.||.+++..| .+...++..+...|+|+|.|++++.. .+++.++...++..+
T Consensus 190 ~~~fD~Vi~~~p-~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G 248 (278)
T 2frn_A 190 ENIADRILMGYV-VRTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYG 248 (278)
T ss_dssp CSCEEEEEECCC-SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTT
T ss_pred cCCccEEEECCc-hhHHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcC
Confidence 357998888654 56778999999999999999987765 345566666666543
No 99
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=94.23 E-value=0.029 Score=49.78 Aligned_cols=42 Identities=19% Similarity=0.030 Sum_probs=34.9
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 196 La~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
++..+....+.+|.+||.++.+.|.++..++.+ .++|+.++.
T Consensus 11 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~ 52 (185)
T 3mti_A 11 MSHDFLAEVLDDESIVVDATMGNGNDTAFLAGL---SKKVYAFDV 52 (185)
T ss_dssp HHHHHHHTTCCTTCEEEESCCTTSHHHHHHHTT---SSEEEEEES
T ss_pred HHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEEC
Confidence 444555667899999999999999999999988 468888876
No 100
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=94.22 E-value=0.13 Score=49.10 Aligned_cols=37 Identities=5% Similarity=0.048 Sum_probs=31.4
Q ss_pred CCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecC
Q 012978 204 NVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIG 241 (452)
Q Consensus 204 nI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~ 241 (452)
-|.+|.+||.+++++|.|+.+++.+ |..++|+.++..
T Consensus 18 ~v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~ 54 (244)
T 3gnl_A 18 YITKNERIADIGSDHAYLPCFAVKN-QTASFAIAGEVV 54 (244)
T ss_dssp TCCSSEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESS
T ss_pred hCCCCCEEEEECCccHHHHHHHHHh-CCCCEEEEEECC
Confidence 4678999999999999999999875 667788888764
No 101
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=94.20 E-value=0.24 Score=44.23 Aligned_cols=47 Identities=15% Similarity=-0.024 Sum_probs=37.7
Q ss_pred HHHHHHhcC-CCCCCeEEEEeCCCcHHHHHHHHHhCC-CceEEEeecCC
Q 012978 196 LSLLLSMGN-VAANSDVLVVDMAGGLLTGAVAERLGG-TGYVCNTCIGD 242 (452)
Q Consensus 196 La~iL~~an-I~~g~rvLv~d~~~GlltaAv~ermgg-~G~v~~~~~~~ 242 (452)
|.+++..-+ +.+|.+||.++.+.|.++.++++++++ .+.|+.++...
T Consensus 10 l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~ 58 (201)
T 2plw_A 10 LIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKI 58 (201)
T ss_dssp HHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSC
T ss_pred HHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCc
Confidence 445554444 689999999999999999999999975 67899887643
No 102
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=94.18 E-value=0.15 Score=51.17 Aligned_cols=45 Identities=18% Similarity=0.159 Sum_probs=32.2
Q ss_pred hHHHHHHHhc--CCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 194 DMLSLLLSMG--NVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 194 DtLa~iL~~a--nI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+..+.++.++ ...+|.+||.++ +.|.++.+++.+ |..+.|+.++.
T Consensus 157 ~~~~~~l~~~~~~~~~~~~VLDlG-G~G~~~~~la~~-~~~~~v~~vDi 203 (373)
T 2qm3_A 157 TTVARVILMHTRGDLENKDIFVLG-DDDLTSIALMLS-GLPKRIAVLDI 203 (373)
T ss_dssp HHHHHHHHHHHTTCSTTCEEEEES-CTTCHHHHHHHH-TCCSEEEEECS
T ss_pred HHHHHHHHHhhcCCCCCCEEEEEC-CCCHHHHHHHHh-CCCCEEEEEEC
Confidence 3444555332 234689999999 999999888764 66678888865
No 103
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=94.15 E-value=0.44 Score=43.89 Aligned_cols=46 Identities=9% Similarity=0.073 Sum_probs=32.8
Q ss_pred hhcCcceEEEeCCC---CCh--HHHHHhHHhcccCCCcEEEEeCChHHHHH
Q 012978 349 KENGFSSMIVVAPE---LDP--WSFVKDLLPLLSYSAPFAIYHQYLQPLAT 394 (452)
Q Consensus 349 ~~~~~D~liia~~~---~dP--~~il~~ll~~L~pS~p~VVYsp~~epL~e 394 (452)
..+.||.++...-- .+| ..++..+...|+|+|.+++-.|....+.+
T Consensus 98 ~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 148 (240)
T 3dli_A 98 PDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYS 148 (240)
T ss_dssp CTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHH
T ss_pred CCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHH
Confidence 34678977664311 133 78899999999999999998877665433
No 104
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=94.09 E-value=0.31 Score=48.27 Aligned_cols=52 Identities=23% Similarity=0.197 Sum_probs=45.6
Q ss_pred cccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 189 GFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 189 ~~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.-|+....+.|+.+++..+|.++|....++|.++..++.+.|+.+.|+.++.
T Consensus 185 a~l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di 236 (354)
T 3tma_A 185 GSLTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDL 236 (354)
T ss_dssp CSCCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEES
T ss_pred CCcCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEEC
Confidence 4577777788999999999999999999999999999998877788888876
No 105
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=94.04 E-value=0.15 Score=48.71 Aligned_cols=50 Identities=12% Similarity=0.034 Sum_probs=39.8
Q ss_pred cchhHHHHHHHh-cCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 191 LRVDMLSLLLSM-GNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 191 lR~DtLa~iL~~-anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.+.+.+..++.. ..+.++.+||.++.+.|.++..++++.++...|+.+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~ 55 (284)
T 3gu3_A 5 YNDDYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDS 55 (284)
T ss_dssp CCHHHHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEES
T ss_pred cchHHHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEEC
Confidence 345566777644 47889999999999999999999998865568887765
No 106
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=94.03 E-value=0.27 Score=48.62 Aligned_cols=57 Identities=7% Similarity=-0.002 Sum_probs=40.6
Q ss_pred hcCcccccccchhHHHHHHHh---cCCCCCC--eEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 182 KKNPARIGFLRVDMLSLLLSM---GNVAANS--DVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 182 ~Kdp~Ki~~lR~DtLa~iL~~---anI~~g~--rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+|.+..+-...+|+..+.+ +. ..+. +||+++.+.|.++..++.+..+. +|+.++.
T Consensus 60 l~dP~~le~~Y~e~m~~~~~~l~~~~-p~p~~~rVLdIG~G~G~la~~la~~~p~~-~v~~VEi 121 (317)
T 3gjy_A 60 LGQPQALEFEYMRWIATGARAFIDAH-QDASKLRITHLGGGACTMARYFADVYPQS-RNTVVEL 121 (317)
T ss_dssp TTCTTCCCSHHHHHHHHHHHHHHHHH-SCGGGCEEEEESCGGGHHHHHHHHHSTTC-EEEEEES
T ss_pred CCCCcchhhHHHHHHHHHHHhhcccC-CCCCCCEEEEEECCcCHHHHHHHHHCCCc-EEEEEEC
Confidence 456766666666777777664 11 1233 99999999999999999976443 7777765
No 107
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=93.98 E-value=0.07 Score=48.97 Aligned_cols=47 Identities=19% Similarity=0.213 Sum_probs=40.6
Q ss_pred cchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 191 LRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 191 lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+..++.++.++++.+|.+||.++.+.|.++..++++. +.|+.++.
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~ 100 (231)
T 1vbf_A 54 TALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEI 100 (231)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEES
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeC
Confidence 456778889999999999999999999999999999873 67887765
No 108
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=93.97 E-value=0.041 Score=47.91 Aligned_cols=41 Identities=10% Similarity=-0.074 Sum_probs=32.5
Q ss_pred HHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 197 SLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 197 a~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..++...++.+|.+||.++.+.|.++.+++++. +.++.+..
T Consensus 7 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~ 47 (170)
T 3i9f_A 7 EEYLPNIFEGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDI 47 (170)
T ss_dssp TTTHHHHHSSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECS
T ss_pred HHHHHhcCcCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeC
Confidence 345556678899999999999999999998875 36766654
No 109
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=93.91 E-value=0.14 Score=49.72 Aligned_cols=43 Identities=12% Similarity=0.128 Sum_probs=35.7
Q ss_pred HHHHHHhcC-CCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 196 LSLLLSMGN-VAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 196 La~iL~~an-I~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
...++.+.+ +.+|.+||.++.+.|.++..++++.| +.|+.++.
T Consensus 105 ~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~ 148 (312)
T 3vc1_A 105 AEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFG--SRVEGVTL 148 (312)
T ss_dssp HHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEES
T ss_pred HHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcC--CEEEEEeC
Confidence 355777777 99999999999999999999999974 46777765
No 110
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=93.90 E-value=0.091 Score=50.25 Aligned_cols=37 Identities=14% Similarity=0.018 Sum_probs=32.7
Q ss_pred CCCCCCeEEEEeCCCcHHHHHHHHHhCCCc-eEEEeec
Q 012978 204 NVAANSDVLVVDMAGGLLTGAVAERLGGTG-YVCNTCI 240 (452)
Q Consensus 204 nI~~g~rvLv~d~~~GlltaAv~ermgg~G-~v~~~~~ 240 (452)
.++||++||.++.+.|.++.+++++++..| +|+.+..
T Consensus 67 ~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~ 104 (261)
T 4gek_A 67 FVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDN 104 (261)
T ss_dssp HCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEES
T ss_pred hCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEEC
Confidence 489999999999999999999999998666 6887765
No 111
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=93.88 E-value=0.043 Score=51.38 Aligned_cols=33 Identities=15% Similarity=-0.020 Sum_probs=26.0
Q ss_pred CCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 206 AANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 206 ~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.+|+|||.++.+.|..+.+++++.+. .++.++.
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~--~v~~id~ 91 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPID--EHWIIEC 91 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEE--EEEEEEC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCc--EEEEEeC
Confidence 68999999999999999998876432 5555554
No 112
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=93.62 E-value=0.44 Score=46.64 Aligned_cols=59 Identities=8% Similarity=0.061 Sum_probs=40.2
Q ss_pred hcCcceEEEeCCCCC----h------HHHHHhHHhcccCCCcEEEEe--CC---hHHHHHHHHHHHhccCccceee
Q 012978 350 ENGFSSMIVVAPELD----P------WSFVKDLLPLLSYSAPFAIYH--QY---LQPLATCMHSLQVRKMAIGLQI 410 (452)
Q Consensus 350 ~~~~D~liia~~~~d----P------~~il~~ll~~L~pS~p~VVYs--p~---~epL~e~~~~L~~~~~~v~l~l 410 (452)
.+.||.+|++.+.+. | ..++..+...|+|+|.|++.+ |+ .+.+.++...|+.. |-++.+
T Consensus 149 ~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~--F~~v~~ 222 (314)
T 1uir_A 149 EERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREA--FRYVRS 222 (314)
T ss_dssp CCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTT--CSEEEE
T ss_pred CCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHH--CCceEE
Confidence 467999999875321 1 367999999999999999874 44 34456666777643 444433
No 113
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=93.61 E-value=0.44 Score=46.55 Aligned_cols=35 Identities=17% Similarity=0.153 Sum_probs=28.7
Q ss_pred CCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 205 VAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 205 I~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
...+.+||+++.+.|.++..++.+ ++.++|+.++.
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDi 127 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKH-PSVESVVQCEI 127 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTC-TTCCEEEEEES
T ss_pred CCCCCEEEEECCCchHHHHHHHHc-CCCCEEEEEEC
Confidence 445789999999999999999876 45568888876
No 114
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=93.52 E-value=0.4 Score=47.18 Aligned_cols=57 Identities=12% Similarity=0.169 Sum_probs=41.1
Q ss_pred hcCcceEEEeCCCCCh---------HHHHHhHHhcccCCCcEEEEe--CCh--HHHHHHHHHHHhccCccceee
Q 012978 350 ENGFSSMIVVAPELDP---------WSFVKDLLPLLSYSAPFAIYH--QYL--QPLATCMHSLQVRKMAIGLQI 410 (452)
Q Consensus 350 ~~~~D~liia~~~~dP---------~~il~~ll~~L~pS~p~VVYs--p~~--epL~e~~~~L~~~~~~v~l~l 410 (452)
.+.||.+|++.+ +| ..++..+...|+|+|.+++.+ |+. +.+.+++..|++. |-.+..
T Consensus 187 ~~~fDvIi~d~~--~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~--F~~v~~ 256 (321)
T 2pt6_A 187 TNTYDVIIVDSS--DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKL--FKKVEY 256 (321)
T ss_dssp CSCEEEEEEECC--CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTT--CSEEEE
T ss_pred CCCceEEEECCc--CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHH--CCCeEE
Confidence 357998888763 44 478999999999999999864 433 4567777788753 544433
No 115
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=93.38 E-value=0.29 Score=44.08 Aligned_cols=41 Identities=22% Similarity=0.079 Sum_probs=31.3
Q ss_pred HHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 197 SLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 197 a~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..++......++.+||.++.+.|.++.+++++ |. .|+.+..
T Consensus 42 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~--~v~~vD~ 82 (227)
T 3e8s_A 42 QAILLAILGRQPERVLDLGCGEGWLLRALADR-GI--EAVGVDG 82 (227)
T ss_dssp HHHHHHHHHTCCSEEEEETCTTCHHHHHHHTT-TC--EEEEEES
T ss_pred HHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHC-CC--EEEEEcC
Confidence 44555556667899999999999999999887 32 6766654
No 116
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=93.13 E-value=0.25 Score=49.79 Aligned_cols=42 Identities=5% Similarity=0.045 Sum_probs=34.7
Q ss_pred HHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 198 LLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 198 ~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+++.+....++++||.++.+.|.++.+++.+. +...|+.++.
T Consensus 213 ~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~ 254 (375)
T 4dcm_A 213 FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDE 254 (375)
T ss_dssp HHHHTCCCSCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEES
T ss_pred HHHHhCcccCCCeEEEEeCcchHHHHHHHHHC-CCCEEEEEEC
Confidence 46777777888999999999999999999874 4457887765
No 117
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=93.11 E-value=0.16 Score=48.17 Aligned_cols=40 Identities=25% Similarity=0.138 Sum_probs=31.8
Q ss_pred HHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 198 LLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 198 ~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.++.+..+.++.+||.++.+.|.++..+++ . .+.|+.+..
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~-~--~~~v~gvD~ 87 (279)
T 3ccf_A 48 DLLQLLNPQPGEFILDLGCGTGQLTEKIAQ-S--GAEVLGTDN 87 (279)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSHHHHHHHH-T--TCEEEEEES
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHHHHHHh-C--CCeEEEEEC
Confidence 445555788999999999999999999998 2 357777765
No 118
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=92.98 E-value=0.6 Score=45.89 Aligned_cols=50 Identities=20% Similarity=0.195 Sum_probs=34.2
Q ss_pred hcCcceEEEeCCCCCh---------HHHHHhHHhcccCCCcEEEEe--CCh--HHHHHHHHHHHh
Q 012978 350 ENGFSSMIVVAPELDP---------WSFVKDLLPLLSYSAPFAIYH--QYL--QPLATCMHSLQV 401 (452)
Q Consensus 350 ~~~~D~liia~~~~dP---------~~il~~ll~~L~pS~p~VVYs--p~~--epL~e~~~~L~~ 401 (452)
.+.||.+|++.+ +| ..++..+...|+|+|.+|+.+ ++. +.+..+...|+.
T Consensus 179 ~~~fD~Ii~d~~--~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~ 241 (314)
T 2b2c_A 179 KNEFDVIITDSS--DPVGPAESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRK 241 (314)
T ss_dssp TTCEEEEEECCC---------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHH
T ss_pred CCCceEEEEcCC--CCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHH
Confidence 467998888763 44 577899999999999999975 543 345555666654
No 119
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=92.96 E-value=0.6 Score=47.03 Aligned_cols=42 Identities=10% Similarity=0.068 Sum_probs=34.4
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 196 La~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
...++...++.+|.+||.++.+.|.++..++++ |. .|+.++.
T Consensus 96 ~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~-g~--~v~gvD~ 137 (416)
T 4e2x_A 96 ARDFLATELTGPDPFIVEIGCNDGIMLRTIQEA-GV--RHLGFEP 137 (416)
T ss_dssp HHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHT-TC--EEEEECC
T ss_pred HHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHc-CC--cEEEECC
Confidence 467788888999999999999999999999886 32 6766654
No 120
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=92.76 E-value=0.25 Score=44.52 Aligned_cols=42 Identities=21% Similarity=0.191 Sum_probs=31.7
Q ss_pred hHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 194 DMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 194 DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+..++. .+.+|.+||.++.+.|.++..++.+ | ..|+.+..
T Consensus 32 ~~~~~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~-~--~~v~~vD~ 73 (211)
T 3e23_A 32 ATLTKFLG--ELPAGAKILELGCGAGYQAEAMLAA-G--FDVDATDG 73 (211)
T ss_dssp HHHHHHHT--TSCTTCEEEESSCTTSHHHHHHHHT-T--CEEEEEES
T ss_pred HHHHHHHH--hcCCCCcEEEECCCCCHHHHHHHHc-C--CeEEEECC
Confidence 34444443 4678999999999999999999987 3 36776654
No 121
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=92.73 E-value=0.84 Score=40.58 Aligned_cols=46 Identities=15% Similarity=0.117 Sum_probs=33.3
Q ss_pred chhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 192 RVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 192 R~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+...+..+|.. -+.++.+||.++.+.|.++..++.+ |. ..|+.+..
T Consensus 28 ~~~~~~~~l~~-~~~~~~~vLdiGcG~G~~~~~l~~~-~~-~~v~~~D~ 73 (215)
T 2pxx_A 28 DFSSFRALLEP-ELRPEDRILVLGCGNSALSYELFLG-GF-PNVTSVDY 73 (215)
T ss_dssp CHHHHHHHHGG-GCCTTCCEEEETCTTCSHHHHHHHT-TC-CCEEEEES
T ss_pred CHHHHHHHHHH-hcCCCCeEEEECCCCcHHHHHHHHc-CC-CcEEEEeC
Confidence 34445555543 2588999999999999999999887 33 27777765
No 122
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=92.62 E-value=0.53 Score=44.65 Aligned_cols=41 Identities=12% Similarity=-0.013 Sum_probs=31.6
Q ss_pred HHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 198 LLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 198 ~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.++.+.. .++.+||.+++++|.++.+++.+++ .+.|+.++.
T Consensus 101 ~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~-~~~v~~vD~ 141 (276)
T 2b3t_A 101 QALARLP-EQPCRILDLGTGTGAIALALASERP-DCEIIAVDR 141 (276)
T ss_dssp HHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCT-TSEEEEECS
T ss_pred HHHHhcc-cCCCEEEEecCCccHHHHHHHHhCC-CCEEEEEEC
Confidence 3444444 6789999999999999999998874 457777765
No 123
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=92.49 E-value=0.55 Score=42.89 Aligned_cols=42 Identities=17% Similarity=0.148 Sum_probs=33.1
Q ss_pred HHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 197 SLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 197 a~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..|+.+....++.+||.++.+.|.++..++.+ |.+.++.+..
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~~v~~vD~ 74 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH--GASYVLGLDL 74 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEES
T ss_pred HHHHHhccccCCCEEEEEcCcCCHHHHHHHHC--CCCeEEEEcC
Confidence 35666667788999999999999999999887 3346777654
No 124
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=92.43 E-value=0.84 Score=42.43 Aligned_cols=43 Identities=26% Similarity=0.313 Sum_probs=35.5
Q ss_pred HHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 195 MLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 195 tLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.+..++.+.++.++.+||.++.+.|.++..++++. +.|+.+..
T Consensus 25 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~ 67 (260)
T 1vl5_A 25 DLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDL 67 (260)
T ss_dssp CHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEES
T ss_pred HHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeC
Confidence 36777777788999999999999999999998874 37777754
No 125
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=92.39 E-value=1.4 Score=39.51 Aligned_cols=43 Identities=19% Similarity=0.050 Sum_probs=33.7
Q ss_pred HHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 195 MLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 195 tLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.+..++......+|.+||.++.+.|.++..++++ | ..++.+..
T Consensus 33 ~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~--~~v~~vD~ 75 (220)
T 3hnr_A 33 HYEDILEDVVNKSFGNVLEFGVGTGNLTNKLLLA-G--RTVYGIEP 75 (220)
T ss_dssp THHHHHHHHHHTCCSEEEEECCTTSHHHHHHHHT-T--CEEEEECS
T ss_pred HHHHHHHHhhccCCCeEEEeCCCCCHHHHHHHhC-C--CeEEEEeC
Confidence 3456666666779999999999999999999997 3 46776654
No 126
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=92.22 E-value=0.49 Score=46.96 Aligned_cols=44 Identities=20% Similarity=0.225 Sum_probs=32.5
Q ss_pred HHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 195 MLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 195 tLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+|+.+ .+.....+.+||+++.+.|.++..++.+. +.++|+.++.
T Consensus 109 ~L~~l-~l~~~~~~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDi 152 (334)
T 1xj5_A 109 MITHL-PLCSIPNPKKVLVIGGGDGGVLREVARHA-SIEQIDMCEI 152 (334)
T ss_dssp HHHHH-HHTTSSCCCEEEEETCSSSHHHHHHTTCT-TCCEEEEEES
T ss_pred HHHHH-HHhhCCCCCEEEEECCCccHHHHHHHHcC-CCCEEEEEEC
Confidence 34543 33345567899999999999999998764 4468888875
No 127
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=92.20 E-value=1.5 Score=43.28 Aligned_cols=70 Identities=13% Similarity=0.062 Sum_probs=42.7
Q ss_pred hcCcceEEEeCCCC-------------ChHHHHHhHHhcccCCCcEEEEeCChH-----HHHHHHH-HHHhccCccceee
Q 012978 350 ENGFSSMIVVAPEL-------------DPWSFVKDLLPLLSYSAPFAIYHQYLQ-----PLATCMH-SLQVRKMAIGLQI 410 (452)
Q Consensus 350 ~~~~D~liia~~~~-------------dP~~il~~ll~~L~pS~p~VVYsp~~e-----pL~e~~~-~L~~~~~~v~l~l 410 (452)
...||.+|++-|.+ +...++..+..+|+|+|.|++.+.+.. .+.++.. +++..+ ..+..
T Consensus 223 ~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g--~~v~~ 300 (332)
T 2igt_A 223 GSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAG--GVVAS 300 (332)
T ss_dssp TCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSC--SEEEE
T ss_pred CCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcC--CeEEE
Confidence 35799887754421 135788889999999999776655432 2333333 222222 24557
Q ss_pred eeeeeeeeeec
Q 012978 411 SEPWLREYQVL 421 (452)
Q Consensus 411 ~E~~lR~yQVL 421 (452)
.|..++.+.|-
T Consensus 301 ~e~~~p~~~~~ 311 (332)
T 2igt_A 301 GELVIREAGLD 311 (332)
T ss_dssp EEEEEECCCSS
T ss_pred EEEecccCCcc
Confidence 77777776643
No 128
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=92.17 E-value=0.98 Score=42.16 Aligned_cols=43 Identities=19% Similarity=0.105 Sum_probs=36.1
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 196 La~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+..++...++.+|.+||.++.+.|.++..++++.| +.|+.+..
T Consensus 50 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~ 92 (273)
T 3bus_A 50 TDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARD--VRVTGISI 92 (273)
T ss_dssp HHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSC--CEEEEEES
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcC--CEEEEEeC
Confidence 46677888999999999999999999999999874 46777754
No 129
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=91.93 E-value=0.18 Score=49.02 Aligned_cols=37 Identities=14% Similarity=0.113 Sum_probs=30.6
Q ss_pred hcCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeC
Q 012978 350 ENGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQ 387 (452)
Q Consensus 350 ~~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp 387 (452)
++.||.+|+..| +...+.++.++.+|+++|.+.+|+-
T Consensus 190 ~~~~D~Vi~~~p-~~~~~~l~~a~~~lk~gG~ih~~~~ 226 (278)
T 3k6r_A 190 ENIADRILMGYV-VRTHEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp CSCEEEEEECCC-SSGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred ccCCCEEEECCC-CcHHHHHHHHHHHcCCCCEEEEEee
Confidence 467998888766 5678889999999999998888864
No 130
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=91.87 E-value=0.055 Score=52.37 Aligned_cols=64 Identities=11% Similarity=-0.066 Sum_probs=44.6
Q ss_pred HHHHHHhcCccc-ccccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 176 ICEAYFKKNPAR-IGFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 176 l~e~y~~Kdp~K-i~~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+...+|.+.|.- ...-|.+.+..+| ...+.+|.+||.++.+.|.++.+++.+..+.+.|+.++.
T Consensus 87 l~~~~~~~~~~~l~~~~~~~~~~~~l-~~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~ 151 (305)
T 3ocj_A 87 LERVFYERLPAVLATRERHGHFRRAL-QRHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDY 151 (305)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHH-HHHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEES
T ss_pred HHHHHHhhchhhhcchHHHHHHHHHH-HhhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEEC
Confidence 344556665532 2222333355555 667899999999999999999998766666778888865
No 131
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=91.82 E-value=0.71 Score=41.90 Aligned_cols=87 Identities=11% Similarity=0.111 Sum_probs=49.0
Q ss_pred cCcceEEEeCC---CCChHHHHHhHHhcccCCCcEEEEeCChHH-----------------------HHHHHHHHHhccC
Q 012978 351 NGFSSMIVVAP---ELDPWSFVKDLLPLLSYSAPFAIYHQYLQP-----------------------LATCMHSLQVRKM 404 (452)
Q Consensus 351 ~~~D~liia~~---~~dP~~il~~ll~~L~pS~p~VVYsp~~ep-----------------------L~e~~~~L~~~~~ 404 (452)
+.||.++.... ..+|..++..+...|+|+|.+++..+.... ..++...|.. .+
T Consensus 101 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~G 179 (219)
T 1vlm_A 101 ESFDFALMVTTICFVDDPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRK-AG 179 (219)
T ss_dssp TCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHH-TT
T ss_pred CCeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHH-CC
Confidence 46776665431 126888888899999998888776543221 2333444444 35
Q ss_pred ccceeeeeeeeeeeeecCCCCCCCCcccCceEEEE
Q 012978 405 AIGLQISEPWLREYQVLPSRTHPCMQMSGCGGYIL 439 (452)
Q Consensus 405 ~v~l~l~E~~lR~yQVLP~RTHP~m~m~~~~GyiL 439 (452)
|..+++.+.+...---.+...-+. ...+.+||++
T Consensus 180 f~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~ 213 (219)
T 1vlm_A 180 FEEFKVVQTLFKHPSELSEIEPVK-EGYGEGAFVV 213 (219)
T ss_dssp CEEEEEEEECCSCGGGCSSCCCCE-ESSSSSSEEE
T ss_pred CeEEEEecccCCCCCccccchhhh-cCCCCCeEEE
Confidence 777777777665443333333221 2223345554
No 132
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=91.77 E-value=0.63 Score=44.22 Aligned_cols=44 Identities=14% Similarity=-0.029 Sum_probs=35.6
Q ss_pred HHHHHHHhc----CCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 195 MLSLLLSMG----NVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 195 tLa~iL~~a----nI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.+..++... ++.+|.+||.++.+.|.++..++++.|. .|+.+..
T Consensus 66 ~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~--~v~gvD~ 113 (297)
T 2o57_A 66 TDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGV--SIDCLNI 113 (297)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCC--EEEEEES
T ss_pred HHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCC--EEEEEeC
Confidence 345566666 8999999999999999999999999853 6776654
No 133
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=91.56 E-value=1.1 Score=42.88 Aligned_cols=40 Identities=20% Similarity=0.125 Sum_probs=30.4
Q ss_pred HHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 199 LLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 199 iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
++.+.++.+|.+||.+++++|.++.+++.+ | .+.|+.+..
T Consensus 71 l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~-~-~~~v~~~D~ 110 (281)
T 3bzb_A 71 LCWQPELIAGKTVCELGAGAGLVSIVAFLA-G-ADQVVATDY 110 (281)
T ss_dssp HHHCGGGTTTCEEEETTCTTSHHHHHHHHT-T-CSEEEEEEC
T ss_pred HHhcchhcCCCeEEEecccccHHHHHHHHc-C-CCEEEEEeC
Confidence 344445678999999999999999887764 4 457887765
No 134
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=91.47 E-value=2.4 Score=38.50 Aligned_cols=42 Identities=19% Similarity=0.217 Sum_probs=31.2
Q ss_pred hHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 194 DMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 194 DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+..+..+ +.+|.+||.++.+.|.++.+++++ | ..|+.+..
T Consensus 42 ~~~~~l~~~--~~~~~~vLDiG~G~G~~~~~l~~~-~--~~v~~vD~ 83 (242)
T 3l8d_A 42 TIIPFFEQY--VKKEAEVLDVGCGDGYGTYKLSRT-G--YKAVGVDI 83 (242)
T ss_dssp THHHHHHHH--SCTTCEEEEETCTTSHHHHHHHHT-T--CEEEEEES
T ss_pred HHHHHHHHH--cCCCCeEEEEcCCCCHHHHHHHHc-C--CeEEEEEC
Confidence 334444444 458999999999999999999997 3 36776654
No 135
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=91.36 E-value=0.34 Score=43.44 Aligned_cols=42 Identities=17% Similarity=-0.001 Sum_probs=31.9
Q ss_pred HHHHHHhc-CCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 196 LSLLLSMG-NVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 196 La~iL~~a-nI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+..++... .+.++.+||.++.+.|.++.+++.+ | ..|+.+..
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~-~--~~v~~~D~ 76 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGYWTRHLSGL-A--DRVTALDG 76 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH-S--SEEEEEES
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc-C--CeEEEEeC
Confidence 33444433 4888999999999999999999998 3 36776654
No 136
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=91.20 E-value=0.53 Score=44.54 Aligned_cols=41 Identities=24% Similarity=0.124 Sum_probs=31.8
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 196 La~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+..++...... +.+||.++.+.|.++..++.+ | ..|+.+..
T Consensus 58 l~~~l~~~~~~-~~~vLDiGcG~G~~~~~l~~~-~--~~v~gvD~ 98 (285)
T 4htf_A 58 LDRVLAEMGPQ-KLRVLDAGGGEGQTAIKMAER-G--HQVILCDL 98 (285)
T ss_dssp HHHHHHHTCSS-CCEEEEETCTTCHHHHHHHHT-T--CEEEEEES
T ss_pred HHHHHHhcCCC-CCEEEEeCCcchHHHHHHHHC-C--CEEEEEEC
Confidence 55666665544 789999999999999999988 3 36777765
No 137
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=91.03 E-value=1.3 Score=39.99 Aligned_cols=47 Identities=11% Similarity=0.042 Sum_probs=34.4
Q ss_pred ccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 190 FLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 190 ~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..|.+.+...+ ...++.+||.++.+.|.++.+++++ ++...|+.+..
T Consensus 15 ~~~~~~l~~~l---~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~ 61 (217)
T 3jwh_A 15 QQRMNGVVAAL---KQSNARRVIDLGCGQGNLLKILLKD-SFFEQITGVDV 61 (217)
T ss_dssp HHHHHHHHHHH---HHTTCCEEEEETCTTCHHHHHHHHC-TTCSEEEEEES
T ss_pred HHHHHHHHHHH---HhcCCCEEEEeCCCCCHHHHHHHhh-CCCCEEEEEEC
Confidence 33444444444 5567899999999999999999875 45568888765
No 138
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=90.99 E-value=0.29 Score=43.80 Aligned_cols=33 Identities=9% Similarity=-0.120 Sum_probs=27.8
Q ss_pred CCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 207 ANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 207 ~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+|.+||.++.+.|.++.+++.+.+ .+.++.++.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~ 97 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRP-EAHFTLLDS 97 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCT-TSEEEEEES
T ss_pred CCCeEEEECCCCCHHHHHHHHHCC-CCEEEEEeC
Confidence 589999999999999999998863 457887765
No 139
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=90.94 E-value=0.25 Score=44.74 Aligned_cols=32 Identities=19% Similarity=-0.008 Sum_probs=26.0
Q ss_pred CCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 207 ANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 207 ~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+|.+||.++.+.|.++.+++.+ | .+.|+.++.
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~-~-~~~v~gvD~ 84 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSR-Q-AKKVTFLEL 84 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT-T-CSEEEEECS
T ss_pred CCCeEEEcCCccCHHHHHHHHc-c-CCEEEEEEC
Confidence 6899999999999999887776 3 357887765
No 140
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=90.88 E-value=1.1 Score=45.04 Aligned_cols=59 Identities=14% Similarity=0.245 Sum_probs=39.5
Q ss_pred hcCcceEEEeCCC----CCh-----HHHHHhH----HhcccCCCcEEEEe--CChHHHHHHHHH-HHhccCccceee
Q 012978 350 ENGFSSMIVVAPE----LDP-----WSFVKDL----LPLLSYSAPFAIYH--QYLQPLATCMHS-LQVRKMAIGLQI 410 (452)
Q Consensus 350 ~~~~D~liia~~~----~dP-----~~il~~l----l~~L~pS~p~VVYs--p~~epL~e~~~~-L~~~~~~v~l~l 410 (452)
.+.||.+|++.+. ..| ++....+ ...|+|+|.+|+.+ ++...+..+|.. |+. .|-.+..
T Consensus 265 ~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~~~~~~~l~~--~F~~v~~ 339 (364)
T 2qfm_A 265 GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGR--LYCPVEF 339 (364)
T ss_dssp TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTT--SSSCEEE
T ss_pred CCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHHHH--hCCceEE
Confidence 3579999999852 124 4555665 89999999999765 555556677776 653 4555543
No 141
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=90.85 E-value=2.4 Score=38.08 Aligned_cols=42 Identities=14% Similarity=0.136 Sum_probs=33.5
Q ss_pred HHHHH-hcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecC
Q 012978 197 SLLLS-MGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIG 241 (452)
Q Consensus 197 a~iL~-~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~ 241 (452)
-+|+. +.-+++|.+||.++.+.|.++..++++ .|.|+.++..
T Consensus 14 ~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~ 56 (191)
T 3dou_A 14 EFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQ 56 (191)
T ss_dssp HHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESS
T ss_pred HHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEecc
Confidence 34443 334689999999999999999999998 5789988764
No 142
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=90.85 E-value=1 Score=41.52 Aligned_cols=43 Identities=16% Similarity=0.142 Sum_probs=35.8
Q ss_pred HHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 195 MLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 195 tLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
....++.+.++.+|.+||.++.+.|.++.+++++. +.|+.+..
T Consensus 9 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~ 51 (239)
T 1xxl_A 9 SLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDA 51 (239)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEES
T ss_pred CcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEEC
Confidence 35678888899999999999999999999998763 36776654
No 143
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=90.67 E-value=0.36 Score=42.60 Aligned_cols=41 Identities=20% Similarity=0.003 Sum_probs=32.6
Q ss_pred HHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 197 SLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 197 a~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..++.+.+..++.+||.++.+.|.++..++++ | ..++.+..
T Consensus 22 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~--~~v~~vD~ 62 (199)
T 2xvm_A 22 SEVLEAVKVVKPGKTLDLGCGNGRNSLYLAAN-G--YDVDAWDK 62 (199)
T ss_dssp HHHHHHTTTSCSCEEEEETCTTSHHHHHHHHT-T--CEEEEEES
T ss_pred HHHHHHhhccCCCeEEEEcCCCCHHHHHHHHC-C--CeEEEEEC
Confidence 35666667778999999999999999999987 3 36777655
No 144
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=90.46 E-value=0.9 Score=45.75 Aligned_cols=34 Identities=21% Similarity=0.066 Sum_probs=28.1
Q ss_pred CCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecC
Q 012978 206 AANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIG 241 (452)
Q Consensus 206 ~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~ 241 (452)
.+|.+||.+..+.|.++.+++.+ |-+.|+.++..
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~--ga~~V~~vD~s 244 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMG--GAMATTSVDLA 244 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHT--TBSEEEEEESC
T ss_pred cCCCeEEEEeeccCHHHHHHHHC--CCCEEEEEECC
Confidence 68999999999999999988875 44578888763
No 145
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=90.33 E-value=0.76 Score=46.20 Aligned_cols=38 Identities=18% Similarity=0.038 Sum_probs=30.2
Q ss_pred hcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 202 MGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 202 ~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+++||.+||-+-..-|-=|.++|+. +..|.|+.++.
T Consensus 143 ~L~~~pg~~VLD~CAaPGGKT~~la~~-~~~~~l~A~D~ 180 (359)
T 4fzv_A 143 ALGLQPGDIVLDLCAAPGGKTLALLQT-GCCRNLAANDL 180 (359)
T ss_dssp HHCCCTTEEEEESSCTTCHHHHHHHHT-TCEEEEEEECS
T ss_pred HhCCCCCCEEEEecCCccHHHHHHHHh-cCCCcEEEEcC
Confidence 458999999888877778889999985 45578887765
No 146
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=90.25 E-value=0.88 Score=40.44 Aligned_cols=39 Identities=3% Similarity=-0.153 Sum_probs=29.2
Q ss_pred cCcceEEEeC-----CCCChHHHHHhHHhcccCCCcEEEEeCCh
Q 012978 351 NGFSSMIVVA-----PELDPWSFVKDLLPLLSYSAPFAIYHQYL 389 (452)
Q Consensus 351 ~~~D~liia~-----~~~dP~~il~~ll~~L~pS~p~VVYsp~~ 389 (452)
+.||.++... +.-++..++..+...|+|+|.+++-.+..
T Consensus 101 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 144 (203)
T 3h2b_A 101 KRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSG 144 (203)
T ss_dssp CCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred CCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccC
Confidence 5789666633 11278899999999999999998766443
No 147
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=90.09 E-value=0.53 Score=44.42 Aligned_cols=47 Identities=6% Similarity=-0.104 Sum_probs=35.7
Q ss_pred cCcceEEEeCCC-------CChHHHHHhHHhcccCCCcEEEEeCChHHHHHHHH
Q 012978 351 NGFSSMIVVAPE-------LDPWSFVKDLLPLLSYSAPFAIYHQYLQPLATCMH 397 (452)
Q Consensus 351 ~~~D~liia~~~-------~dP~~il~~ll~~L~pS~p~VVYsp~~epL~e~~~ 397 (452)
+.||.++....- .++..++..+...|+|+|.+++-.|..+.+.+.+.
T Consensus 132 ~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~ 185 (298)
T 1ri5_A 132 KEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYK 185 (298)
T ss_dssp SCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHH
T ss_pred CCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHc
Confidence 578977765321 23577899999999999999999999877665544
No 148
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=90.07 E-value=1.2 Score=42.44 Aligned_cols=37 Identities=16% Similarity=0.034 Sum_probs=28.3
Q ss_pred hcCcceEEEeCCC---CChHHHHHhHHhcccCCCcEEEEe
Q 012978 350 ENGFSSMIVVAPE---LDPWSFVKDLLPLLSYSAPFAIYH 386 (452)
Q Consensus 350 ~~~~D~liia~~~---~dP~~il~~ll~~L~pS~p~VVYs 386 (452)
.+.||.++...-- .||..++..+...|+|+|.|++-.
T Consensus 133 ~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 133 LQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp CCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 4679966665311 379999999999999999988743
No 149
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=89.98 E-value=0.29 Score=42.77 Aligned_cols=33 Identities=18% Similarity=0.281 Sum_probs=27.4
Q ss_pred CCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 205 VAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 205 I~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+.++.+||.++.+.|.++.+++.+ | ..++.+..
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~-~--~~v~~~D~ 76 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ-G--HDVLGTDL 76 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT-T--CEEEEEES
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC-C--CcEEEEcC
Confidence 678999999999999999999987 3 36766654
No 150
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=89.46 E-value=0.38 Score=45.13 Aligned_cols=34 Identities=21% Similarity=0.147 Sum_probs=28.6
Q ss_pred CCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 206 AANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 206 ~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.+|.+||.++.+.|.++..++.++++ +.|+.+..
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~-~~v~~vD~ 117 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPE-ITTFGLDV 117 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTT-SEEEEEES
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCC-CeEEEEeC
Confidence 57999999999999999999998843 47777765
No 151
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=89.34 E-value=1.9 Score=38.82 Aligned_cols=44 Identities=9% Similarity=0.104 Sum_probs=33.3
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 196 La~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+..|+.+....++.+||.++.+.|.++.+++++ ++...|+.++.
T Consensus 18 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~ 61 (219)
T 3jwg_A 18 LGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKD-KSFEQITGVDV 61 (219)
T ss_dssp HHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTS-TTCCEEEEEES
T ss_pred HHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhc-CCCCEEEEEEC
Confidence 344444445567899999999999999999875 44568888865
No 152
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=89.31 E-value=0.69 Score=46.39 Aligned_cols=83 Identities=13% Similarity=0.046 Sum_probs=49.6
Q ss_pred hcCcceEEEeCCCCC------------hHHHHHhHHhcccCCCcEEEEeCChHH----HHHHHH-HHHhccCccceeeee
Q 012978 350 ENGFSSMIVVAPELD------------PWSFVKDLLPLLSYSAPFAIYHQYLQP----LATCMH-SLQVRKMAIGLQISE 412 (452)
Q Consensus 350 ~~~~D~liia~~~~d------------P~~il~~ll~~L~pS~p~VVYsp~~ep----L~e~~~-~L~~~~~~v~l~l~E 412 (452)
...||.+|++-|.+. ...++..+...|+|+|.+++++..... +.+... ++...+ ..+++.+
T Consensus 277 ~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g--~~~~~i~ 354 (382)
T 1wxx_A 277 GERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAH--RLLRVVE 354 (382)
T ss_dssp TCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTT--CCEEEEE
T ss_pred CCCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcC--CeEEEEE
Confidence 357998888765421 246888999999999998888765322 222221 222221 1223322
Q ss_pred eeeeeeeecCCCCCCCCcccCceEEEEE
Q 012978 413 PWLREYQVLPSRTHPCMQMSGCGGYILS 440 (452)
Q Consensus 413 ~~lR~yQVLP~RTHP~m~m~~~~GyiLs 440 (452)
. .-+..-||.......|.|+=.
T Consensus 355 ~------~~~~~d~p~~~~~pe~~yLk~ 376 (382)
T 1wxx_A 355 K------RGQPFDHPVLLNHPETHYLKF 376 (382)
T ss_dssp E------ECCCTTSCCBTTBGGGCCCEE
T ss_pred c------CCCCCCCCCCCCCCCCCCcEE
Confidence 1 134567888877778888654
No 153
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=89.09 E-value=0.65 Score=46.74 Aligned_cols=33 Identities=21% Similarity=0.006 Sum_probs=28.1
Q ss_pred CCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 206 AANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 206 ~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.+|.+||.+..+.|.++.+++.+ |.+.|+.++.
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~--g~~~v~~vD~ 248 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIA--GADEVIGIDK 248 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT--TCSEEEEEES
T ss_pred hCCCeEEEecCCCCHHHHHHHHC--CCCEEEEEeC
Confidence 48999999999999999999876 4568888876
No 154
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=89.08 E-value=0.85 Score=43.88 Aligned_cols=40 Identities=18% Similarity=0.101 Sum_probs=31.3
Q ss_pred HHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 199 LLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 199 iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
++.+....++.+||.+++++|.++.+++.+ +...|+.++.
T Consensus 115 ~l~~~~~~~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDi 154 (284)
T 1nv8_A 115 ALELIRKYGIKTVADIGTGSGAIGVSVAKF--SDAIVFATDV 154 (284)
T ss_dssp HHHHHHHHTCCEEEEESCTTSHHHHHHHHH--SSCEEEEEES
T ss_pred HHHHhcccCCCEEEEEeCchhHHHHHHHHC--CCCEEEEEEC
Confidence 333333347889999999999999999998 5668888876
No 155
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=89.01 E-value=0.96 Score=42.79 Aligned_cols=47 Identities=15% Similarity=0.251 Sum_probs=36.2
Q ss_pred hhcCcceEEEe-CC---CCC-------hHHHHHhHHhcccCCCcEEEEeCChHHHHHH
Q 012978 349 KENGFSSMIVV-AP---ELD-------PWSFVKDLLPLLSYSAPFAIYHQYLQPLATC 395 (452)
Q Consensus 349 ~~~~~D~liia-~~---~~d-------P~~il~~ll~~L~pS~p~VVYsp~~epL~e~ 395 (452)
..+.||.+++. .- -.+ +..++..+...|+|+|.|++-.|..+.+.+.
T Consensus 127 ~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~ 184 (293)
T 3thr_A 127 AGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYILST 184 (293)
T ss_dssp CTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHH
T ss_pred cCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCHHHHhhc
Confidence 35689977764 10 124 7889999999999999999999998877654
No 156
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=89.01 E-value=4 Score=37.94 Aligned_cols=45 Identities=13% Similarity=0.155 Sum_probs=36.6
Q ss_pred hhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 193 VDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 193 ~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
......++.+.++.++.+||.++.+.|.++..+++ . .+.|+.+..
T Consensus 20 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~--~~~v~gvD~ 64 (261)
T 3ege_A 20 IRIVNAIINLLNLPKGSVIADIGAGTGGYSVALAN-Q--GLFVYAVEP 64 (261)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT-T--TCEEEEECS
T ss_pred HHHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh-C--CCEEEEEeC
Confidence 45667788888889999999999999999999987 2 357777754
No 157
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=88.93 E-value=1.5 Score=45.13 Aligned_cols=50 Identities=8% Similarity=0.010 Sum_probs=42.6
Q ss_pred cchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecC
Q 012978 191 LRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIG 241 (452)
Q Consensus 191 lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~ 241 (452)
+-++.+..|+..+++.+|++||-+++|.|-++.+++.+.| .++|+.++..
T Consensus 157 t~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS 206 (438)
T 3uwp_A 157 TSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKA 206 (438)
T ss_dssp THHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECC
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCC
Confidence 3356799999999999999999999999999999988764 3479988764
No 158
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=88.93 E-value=0.32 Score=44.63 Aligned_cols=58 Identities=16% Similarity=0.019 Sum_probs=39.2
Q ss_pred cCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhccCccceeeeee
Q 012978 351 NGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRKMAIGLQISEP 413 (452)
Q Consensus 351 ~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~~~v~l~l~E~ 413 (452)
+.||.++.. .+|..++..+...|+|+|.++....+. ...++...|... +|..+++...
T Consensus 110 ~~fD~v~~~---~~~~~~l~~~~~~LkpgG~l~~~~~~~-~~~~~~~~l~~~-Gf~~~~~~~~ 167 (226)
T 3m33_A 110 APFGLIVSR---RGPTSVILRLPELAAPDAHFLYVGPRL-NVPEVPERLAAV-GWDIVAEDHV 167 (226)
T ss_dssp CCEEEEEEE---SCCSGGGGGHHHHEEEEEEEEEEESSS-CCTHHHHHHHHT-TCEEEEEEEE
T ss_pred CCEEEEEeC---CCHHHHHHHHHHHcCCCcEEEEeCCcC-CHHHHHHHHHHC-CCeEEEEEee
Confidence 579966554 389999999999999999999554432 234555566554 4655555443
No 159
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=88.74 E-value=2.8 Score=40.76 Aligned_cols=45 Identities=18% Similarity=0.246 Sum_probs=36.6
Q ss_pred HHHHHHhcCCC-CCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecCC
Q 012978 196 LSLLLSMGNVA-ANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIGD 242 (452)
Q Consensus 196 La~iL~~anI~-~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~~ 242 (452)
|..+|...++. +|.+||-++.+.|.+|..++++ |.++|+.+..+.
T Consensus 73 l~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~--ga~~V~aVDvs~ 118 (291)
T 3hp7_A 73 LEKALAVFNLSVEDMITIDIGASTGGFTDVMLQN--GAKLVYAVDVGT 118 (291)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSS
T ss_pred HHHHHHhcCCCccccEEEecCCCccHHHHHHHhC--CCCEEEEEECCH
Confidence 55677777776 5779999999999999999887 567899998754
No 160
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=88.66 E-value=0.84 Score=39.06 Aligned_cols=41 Identities=20% Similarity=0.280 Sum_probs=31.3
Q ss_pred CcceEEEeCCC-CChHHHHHhHH--hcccCCCcEEEEeCChHHH
Q 012978 352 GFSSMIVVAPE-LDPWSFVKDLL--PLLSYSAPFAIYHQYLQPL 392 (452)
Q Consensus 352 ~~D~liia~~~-~dP~~il~~ll--~~L~pS~p~VVYsp~~epL 392 (452)
.||.++...+. .++..++..+. ..|+|+|.|++-++..+.+
T Consensus 110 ~~D~i~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~~ 153 (171)
T 1ws6_A 110 RFTVAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQHPKDLYL 153 (171)
T ss_dssp CEEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEEEETTSCC
T ss_pred ceEEEEECCCCchhHHHHHHHHHhhcccCCCcEEEEEeCCccCC
Confidence 69977776432 24567888888 9999999999988876554
No 161
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=88.66 E-value=2.2 Score=38.08 Aligned_cols=40 Identities=25% Similarity=0.240 Sum_probs=31.5
Q ss_pred HHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 197 SLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 197 a~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..++.+.. .++.+||.++.+.|.++.+++++ | ..++.++.
T Consensus 23 ~~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~-~--~~~~~~D~ 62 (230)
T 3cc8_A 23 PNLLKHIK-KEWKEVLDIGCSSGALGAAIKEN-G--TRVSGIEA 62 (230)
T ss_dssp HHHHTTCC-TTCSEEEEETCTTSHHHHHHHTT-T--CEEEEEES
T ss_pred HHHHHHhc-cCCCcEEEeCCCCCHHHHHHHhc-C--CeEEEEeC
Confidence 34555555 78999999999999999999988 4 57777765
No 162
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=88.64 E-value=0.66 Score=41.91 Aligned_cols=32 Identities=13% Similarity=-0.024 Sum_probs=25.7
Q ss_pred CCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 207 ANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 207 ~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+|.+||.++.+.|.++.+++.+ | .+.|+.++.
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~-~-~~~V~~vD~ 85 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSR-Y-AAGATLIEM 85 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT-T-CSEEEEECS
T ss_pred CCCeEEEeCCCcCHHHHHHHhc-C-CCEEEEEEC
Confidence 6899999999999999988776 2 347877765
No 163
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=88.37 E-value=0.97 Score=41.72 Aligned_cols=36 Identities=11% Similarity=0.039 Sum_probs=29.9
Q ss_pred hcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 202 MGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 202 ~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
...+.++.+||.++.+.|.++..++.+ | +.|+.+..
T Consensus 34 ~~~~~~~~~vLDiG~G~G~~~~~l~~~-~--~~v~~vD~ 69 (263)
T 2yqz_A 34 VHPKGEEPVFLELGVGTGRIALPLIAR-G--YRYIALDA 69 (263)
T ss_dssp CCCSSSCCEEEEETCTTSTTHHHHHTT-T--CEEEEEES
T ss_pred hcCCCCCCEEEEeCCcCCHHHHHHHHC-C--CEEEEEEC
Confidence 457889999999999999999999887 3 46777655
No 164
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=88.36 E-value=1.2 Score=42.56 Aligned_cols=44 Identities=20% Similarity=0.157 Sum_probs=37.0
Q ss_pred hHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 194 DMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 194 DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.-+..++.+.++.+|.+||.++.+.|.++..++++ | +.|+.+..
T Consensus 32 ~~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~-g--~~V~gvD~ 75 (261)
T 3iv6_A 32 SDRENDIFLENIVPGSTVAVIGASTRFLIEKALER-G--ASVTVFDF 75 (261)
T ss_dssp CHHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHT-T--CEEEEEES
T ss_pred HHHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhc-C--CEEEEEEC
Confidence 44677888999999999999999999999999986 3 36777765
No 165
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=88.35 E-value=1.7 Score=44.05 Aligned_cols=34 Identities=24% Similarity=0.127 Sum_probs=27.0
Q ss_pred CCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 204 NVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 204 nI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
-+++|.+||-+..+.|..+.+++.+ |. .|+.++.
T Consensus 211 ~~~~g~~VLDlg~GtG~~sl~~a~~-ga--~V~avDi 244 (393)
T 4dmg_A 211 MVRPGERVLDVYSYVGGFALRAARK-GA--YALAVDK 244 (393)
T ss_dssp TCCTTCEEEEESCTTTHHHHHHHHT-TC--EEEEEES
T ss_pred HhcCCCeEEEcccchhHHHHHHHHc-CC--eEEEEEC
Confidence 3567999999999999999998874 33 3777765
No 166
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=88.18 E-value=1.2 Score=40.43 Aligned_cols=40 Identities=10% Similarity=0.169 Sum_probs=30.3
Q ss_pred cCcceEEEeCCC---CChHHHHHhHH-hcccCCCcEEEEeCChH
Q 012978 351 NGFSSMIVVAPE---LDPWSFVKDLL-PLLSYSAPFAIYHQYLQ 390 (452)
Q Consensus 351 ~~~D~liia~~~---~dP~~il~~ll-~~L~pS~p~VVYsp~~e 390 (452)
+.||.++...-- .||..++..+. ..|+|+|.+++-.|...
T Consensus 102 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~ 145 (250)
T 2p7i_A 102 RRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCPNAN 145 (250)
T ss_dssp SCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEECTT
T ss_pred CcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCChH
Confidence 568866664310 27899999999 99999999998877654
No 167
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=88.08 E-value=0.9 Score=41.55 Aligned_cols=42 Identities=21% Similarity=0.264 Sum_probs=29.7
Q ss_pred HHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 195 MLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 195 tLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.+..++....+.+ ++||.++.+.|.++..++.+ .+.|+.+..
T Consensus 55 ~l~~~~~~~~~~~-~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~ 96 (235)
T 3lcc_A 55 LIVHLVDTSSLPL-GRALVPGCGGGHDVVAMASP---ERFVVGLDI 96 (235)
T ss_dssp HHHHHHHTTCSCC-EEEEEETCTTCHHHHHHCBT---TEEEEEECS
T ss_pred HHHHHHHhcCCCC-CCEEEeCCCCCHHHHHHHhC---CCeEEEEEC
Confidence 4555666666655 49999999999999988652 335666644
No 168
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=88.07 E-value=3.6 Score=40.76 Aligned_cols=41 Identities=20% Similarity=0.294 Sum_probs=32.1
Q ss_pred HHHhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEeec
Q 012978 199 LLSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 199 iL~~anI~~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~~ 240 (452)
+...+++++|.+|||.+.+. |+++..+|..+|- .+|+.+..
T Consensus 185 l~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga-~~Vi~~~~ 226 (378)
T 3uko_A 185 VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGA-SRIIGIDI 226 (378)
T ss_dssp HHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTC-SCEEEECS
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcC
Confidence 34668999999999998743 8899999998865 36777654
No 169
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=88.02 E-value=0.52 Score=43.41 Aligned_cols=34 Identities=15% Similarity=0.016 Sum_probs=26.4
Q ss_pred CCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 205 VAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 205 I~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+|.+||.++.+.|.++..++++ + ...|+.++.
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~-~-~~~v~gvD~ 91 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEA-P-IDEHWIIEC 91 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTS-C-EEEEEEEEC
T ss_pred CCCCCeEEEEeccCCHHHHHHHhc-C-CCeEEEEcC
Confidence 678999999999999999988653 2 236776654
No 170
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=87.96 E-value=2.9 Score=40.68 Aligned_cols=41 Identities=20% Similarity=0.203 Sum_probs=33.1
Q ss_pred HHHHhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEeec
Q 012978 198 LLLSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 198 ~iL~~anI~~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~~ 240 (452)
+.|..+++++|.+|||.+.++ |+++..+|..+|- +|+....
T Consensus 157 ~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga--~Vi~~~~ 198 (340)
T 3s2e_A 157 KGLKVTDTRPGQWVVISGIGGLGHVAVQYARAMGL--RVAAVDI 198 (340)
T ss_dssp HHHHTTTCCTTSEEEEECCSTTHHHHHHHHHHTTC--EEEEEES
T ss_pred HHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC--eEEEEeC
Confidence 455778999999999998744 9999999998876 6776644
No 171
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=87.91 E-value=0.76 Score=45.30 Aligned_cols=44 Identities=25% Similarity=0.172 Sum_probs=33.8
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 196 La~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
-..|+.+....++++||.++.+.|.++.+++.+ ++.++|+.++.
T Consensus 185 ~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~-~~~~~v~~vD~ 228 (343)
T 2pjd_A 185 SQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARH-SPKIRLTLCDV 228 (343)
T ss_dssp HHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHH-CTTCBCEEEES
T ss_pred HHHHHHhcCcCCCCeEEEecCccCHHHHHHHHH-CCCCEEEEEEC
Confidence 345566666677899999999999999999887 45557777765
No 172
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=87.88 E-value=0.64 Score=42.39 Aligned_cols=44 Identities=18% Similarity=0.258 Sum_probs=34.1
Q ss_pred HHHHHHhcC-CCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 196 LSLLLSMGN-VAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 196 La~iL~~an-I~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+..++.+.. ..++.+||.++.+.|.++..++++. +.+.++.++.
T Consensus 32 ~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~ 76 (234)
T 3dtn_A 32 YGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDM 76 (234)
T ss_dssp HHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEES
T ss_pred HHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEEC
Confidence 345555554 6789999999999999999999986 3457777765
No 173
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=87.81 E-value=3.1 Score=41.69 Aligned_cols=33 Identities=18% Similarity=0.038 Sum_probs=27.5
Q ss_pred CCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 206 AANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 206 ~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.+|.+||.+..+.|.++.+++.+ |.+.|+.++.
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~--g~~~V~~vD~ 251 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMG--GCSQVVSVDT 251 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHT--TCSEEEEEES
T ss_pred hCCCeEEEeeccCCHHHHHHHHC--CCCEEEEEEC
Confidence 58999999999999998888874 3568888876
No 174
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=87.65 E-value=11 Score=33.32 Aligned_cols=35 Identities=14% Similarity=0.026 Sum_probs=29.2
Q ss_pred CCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 204 NVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 204 nI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+..+|.+||.++.+.|.++.+++.+ |.+.|+.++.
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~--~~~~v~~vD~ 80 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLL--GAKEVICVEV 80 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEES
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHc--CCCEEEEEEC
Confidence 5678999999999999999999886 3457887765
No 175
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=87.47 E-value=2.3 Score=38.23 Aligned_cols=33 Identities=18% Similarity=0.306 Sum_probs=27.6
Q ss_pred CCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 205 VAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 205 I~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+.++.+||.++.+.|.++.+++.+ | ..|+.+..
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~-~--~~v~~vD~ 60 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK-G--YSVTGIDI 60 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-T--CEEEEEES
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC-C--CeEEEEEC
Confidence 468999999999999999999998 3 36777765
No 176
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=87.30 E-value=1.2 Score=45.32 Aligned_cols=35 Identities=11% Similarity=-0.117 Sum_probs=30.6
Q ss_pred CCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 206 AANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 206 ~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.+|.+||.+-++.|.++-.++.+++|-+.|+.++.
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi 85 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDI 85 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECS
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEEC
Confidence 57899999999999999999999877778998876
No 177
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=87.13 E-value=4.1 Score=37.85 Aligned_cols=45 Identities=18% Similarity=0.199 Sum_probs=35.2
Q ss_pred HHHHHHhcCCCC-CCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecCC
Q 012978 196 LSLLLSMGNVAA-NSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIGD 242 (452)
Q Consensus 196 La~iL~~anI~~-g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~~ 242 (452)
|..+|...++.+ |.+||.++.+.|.++..++++ |.++|+.+..+.
T Consensus 25 L~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~--g~~~V~gvDis~ 70 (232)
T 3opn_A 25 LEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQN--GAKLVYALDVGT 70 (232)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSC
T ss_pred HHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhc--CCCEEEEEcCCH
Confidence 556666666654 669999999999999999987 445899887754
No 178
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=87.01 E-value=6 Score=34.80 Aligned_cols=39 Identities=8% Similarity=0.020 Sum_probs=28.6
Q ss_pred cCcceEEEeCCCC---ChHHHHHhHHhcccCCCcEEEEeCCh
Q 012978 351 NGFSSMIVVAPEL---DPWSFVKDLLPLLSYSAPFAIYHQYL 389 (452)
Q Consensus 351 ~~~D~liia~~~~---dP~~il~~ll~~L~pS~p~VVYsp~~ 389 (452)
+.||.++...... ++..++..+...|+|+|.+++..+..
T Consensus 93 ~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 93 DAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp TTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred CCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 5789777653211 45778999999999999998876543
No 179
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=86.89 E-value=5.1 Score=39.52 Aligned_cols=39 Identities=15% Similarity=0.198 Sum_probs=29.7
Q ss_pred HhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEeec
Q 012978 201 SMGNVAANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 201 ~~anI~~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+++++|.+|||.+.+. |+++..+|..+|.. +|+....
T Consensus 186 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~-~Vi~~~~ 225 (374)
T 1cdo_A 186 NTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAK-RIIAVDL 225 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCS-EEEEECS
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-EEEEEcC
Confidence 468999999999998633 78888888888642 5766643
No 180
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=86.83 E-value=1.7 Score=39.83 Aligned_cols=49 Identities=10% Similarity=-0.081 Sum_probs=38.1
Q ss_pred ccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 190 FLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 190 ~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+.+.+..++......++.+||.++.+.|.++..++++. ...|+.+..
T Consensus 76 ~~~~~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~ 124 (254)
T 1xtp_A 76 DVDIEGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKL--YATTDLLEP 124 (254)
T ss_dssp HHHHHHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEES
T ss_pred HHHHHHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeC
Confidence 3444555677777778899999999999999999999885 446776654
No 181
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=86.83 E-value=1 Score=42.98 Aligned_cols=37 Identities=11% Similarity=0.217 Sum_probs=30.6
Q ss_pred CcceEEEeC--CCCCh----HHHHHhHHhcccCCCcEEEEeCC
Q 012978 352 GFSSMIVVA--PELDP----WSFVKDLLPLLSYSAPFAIYHQY 388 (452)
Q Consensus 352 ~~D~liia~--~~~dP----~~il~~ll~~L~pS~p~VVYsp~ 388 (452)
.||.++++. |..+| .+++..+...|+|+|.|+.||..
T Consensus 173 ~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tysaa 215 (257)
T 2qy6_A 173 KVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSA 215 (257)
T ss_dssp CEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESCCB
T ss_pred eEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEeCC
Confidence 699999985 43344 24899999999999999999985
No 182
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=86.78 E-value=1.6 Score=42.56 Aligned_cols=49 Identities=18% Similarity=0.212 Sum_probs=38.2
Q ss_pred cCcceEEEeCCCCCh---------HHHHHhHHhcccCCCcEEEE--eCCh--HHHHHHHHHHHh
Q 012978 351 NGFSSMIVVAPELDP---------WSFVKDLLPLLSYSAPFAIY--HQYL--QPLATCMHSLQV 401 (452)
Q Consensus 351 ~~~D~liia~~~~dP---------~~il~~ll~~L~pS~p~VVY--sp~~--epL~e~~~~L~~ 401 (452)
+.||.+|+++. || .+..+.+...|+|+|.+|+. ||+. +.+...+..|++
T Consensus 156 ~~yDvIi~D~~--dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~ 217 (294)
T 3o4f_A 156 QTFDVIISDCT--DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSH 217 (294)
T ss_dssp CCEEEEEESCC--CCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHH
T ss_pred ccCCEEEEeCC--CcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHh
Confidence 57999999974 67 35688899999999999987 5553 456777777775
No 183
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=86.74 E-value=3 Score=41.20 Aligned_cols=39 Identities=18% Similarity=0.148 Sum_probs=30.4
Q ss_pred HhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEeec
Q 012978 201 SMGNVAANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 201 ~~anI~~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+++++|.+|||.+.+. |++++.+|..+|.. +|+.+..
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~-~Vi~~~~ 223 (371)
T 1f8f_A 184 NALKVTPASSFVTWGAGAVGLSALLAAKVCGAS-IIIAVDI 223 (371)
T ss_dssp TTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCS-EEEEEES
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEECC
Confidence 578999999999998644 88888898888653 5666643
No 184
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=86.74 E-value=0.62 Score=46.73 Aligned_cols=42 Identities=19% Similarity=0.124 Sum_probs=34.1
Q ss_pred HHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecC
Q 012978 198 LLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIG 241 (452)
Q Consensus 198 ~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~ 241 (452)
.|+....+.+|.+||.++.+.|.++..++++ |..+|+.++..
T Consensus 54 ~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~--g~~~V~gvD~s 95 (376)
T 3r0q_C 54 AVFQNKHHFEGKTVLDVGTGSGILAIWSAQA--GARKVYAVEAT 95 (376)
T ss_dssp HHHTTTTTTTTCEEEEESCTTTHHHHHHHHT--TCSEEEEEESS
T ss_pred HHHhccccCCCCEEEEeccCcCHHHHHHHhc--CCCEEEEEccH
Confidence 3445567789999999999999999999987 44588888764
No 185
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=86.73 E-value=4.6 Score=39.77 Aligned_cols=39 Identities=18% Similarity=0.216 Sum_probs=30.1
Q ss_pred HhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEeec
Q 012978 201 SMGNVAANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 201 ~~anI~~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+++++|.+|||.+.+. |++++.+|..+|.. +|+....
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~-~Vi~~~~ 223 (373)
T 2fzw_A 184 NTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGAS-RIIGVDI 223 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCS-EEEEECS
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEcC
Confidence 468999999999998633 88888899888642 5766643
No 186
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=86.51 E-value=2.4 Score=41.25 Aligned_cols=41 Identities=12% Similarity=-0.011 Sum_probs=33.6
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 196 La~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
|..|+...-+.+|.+||-++.+.|.++..++++ |.|+.+..
T Consensus 71 L~~i~~~~~~~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~ 111 (305)
T 2p41_A 71 LRWFVERNLVTPEGKVVDLGCGRGGWSYYCGGL----KNVREVKG 111 (305)
T ss_dssp HHHHHHTTSSCCCEEEEEETCTTSHHHHHHHTS----TTEEEEEE
T ss_pred HHHHHHcCCCCCCCEEEEEcCCCCHHHHHHHhc----CCEEEEec
Confidence 566666656789999999999999999999988 57877654
No 187
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=86.49 E-value=5.3 Score=39.41 Aligned_cols=39 Identities=15% Similarity=0.230 Sum_probs=30.1
Q ss_pred HhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEeec
Q 012978 201 SMGNVAANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 201 ~~anI~~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+++++|.+|||.+.+. |++++.+|..+|.. +|+....
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~-~Vi~~~~ 224 (373)
T 1p0f_A 185 NTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGAS-RIIGVGT 224 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCS-EEEEECS
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEECC
Confidence 468999999999998633 88888899888642 5666643
No 188
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=86.41 E-value=0.71 Score=42.60 Aligned_cols=45 Identities=22% Similarity=0.228 Sum_probs=35.5
Q ss_pred hhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 193 VDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 193 ~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.+.+..++......++.+||.++.+.|.++..++.+ | ..|+.+..
T Consensus 27 ~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~-~--~~v~gvD~ 71 (252)
T 1wzn_A 27 IDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAER-G--YEVVGLDL 71 (252)
T ss_dssp HHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT-T--CEEEEEES
T ss_pred HHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHC-C--CeEEEEEC
Confidence 455677777777788999999999999999999886 3 36776654
No 189
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=86.39 E-value=1.8 Score=43.26 Aligned_cols=49 Identities=14% Similarity=0.141 Sum_probs=40.2
Q ss_pred ccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 190 FLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 190 ~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.|+....+.|+.++ ..+|.++|....++|.++..++.+ |..|.|+.++.
T Consensus 201 ~l~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~-~~~~~v~g~Di 249 (373)
T 3tm4_A 201 HLKASIANAMIELA-ELDGGSVLDPMCGSGTILIELALR-RYSGEIIGIEK 249 (373)
T ss_dssp CCCHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHT-TCCSCEEEEES
T ss_pred CccHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHh-CCCCeEEEEeC
Confidence 35666677788888 899999999999999999888764 66678888876
No 190
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=86.29 E-value=1.2 Score=40.46 Aligned_cols=32 Identities=16% Similarity=0.055 Sum_probs=25.4
Q ss_pred CCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 206 AANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 206 ~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.++.+||.++.+.|.++..++.+ | ..++.+..
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~-~--~~~~~~D~ 67 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPK-F--KNTWAVDL 67 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGG-S--SEEEEECS
T ss_pred CCCCeEEEeCCCCCHHHHHHHHC-C--CcEEEEEC
Confidence 37899999999999999999887 3 35666644
No 191
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=86.24 E-value=0.59 Score=44.24 Aligned_cols=39 Identities=13% Similarity=0.017 Sum_probs=29.6
Q ss_pred HHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 199 LLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 199 iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
++...+..++++||.++.+.|.++..++.+ |. .|+.+..
T Consensus 112 ~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~-g~--~v~~vD~ 150 (286)
T 3m70_A 112 VVDAAKIISPCKVLDLGCGQGRNSLYLSLL-GY--DVTSWDH 150 (286)
T ss_dssp HHHHHHHSCSCEEEEESCTTCHHHHHHHHT-TC--EEEEEES
T ss_pred HHHHhhccCCCcEEEECCCCCHHHHHHHHC-CC--eEEEEEC
Confidence 333334458999999999999999999987 32 6777765
No 192
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=86.16 E-value=1.3 Score=42.59 Aligned_cols=42 Identities=17% Similarity=0.079 Sum_probs=35.2
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecC
Q 012978 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIG 241 (452)
Q Consensus 196 La~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~ 241 (452)
|..|+....+.+|.+||-++.+.|.++..++++ |.|+.+...
T Consensus 71 L~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s 112 (276)
T 2wa2_A 71 LAWIDERGGVELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAY 112 (276)
T ss_dssp HHHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEE
T ss_pred HHHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc----CCEEEEECc
Confidence 566666677889999999999999999999887 689988763
No 193
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=86.06 E-value=1.2 Score=41.09 Aligned_cols=43 Identities=5% Similarity=-0.094 Sum_probs=31.7
Q ss_pred HHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 195 MLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 195 tLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.|..++.. +..+|.+||.++.+.|.++..++.+ |. +.|+.+..
T Consensus 45 ~l~~~~~~-~~~~~~~vLDlGcG~G~~~~~l~~~-~~-~~v~gvD~ 87 (265)
T 2i62_A 45 NLFKIFCL-GAVKGELLIDIGSGPTIYQLLSACE-SF-TEIIVSDY 87 (265)
T ss_dssp HHHHHHHS-SSCCEEEEEEESCTTCCGGGTTGGG-TE-EEEEEEES
T ss_pred HHHHHhcc-cccCCCEEEEECCCccHHHHHHhhc-cc-CeEEEecC
Confidence 35566666 6678899999999999998887754 32 56777765
No 194
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=85.67 E-value=0.6 Score=44.84 Aligned_cols=35 Identities=26% Similarity=0.191 Sum_probs=30.1
Q ss_pred CCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 205 VAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 205 I~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+|.+||.++.+.|.++..++.++++. .|+.+..
T Consensus 44 ~~~~~~VLDiGCG~G~~~~~la~~~~~~-~v~gvDi 78 (292)
T 3g07_A 44 WFRGRDVLDLGCNVGHLTLSIACKWGPS-RMVGLDI 78 (292)
T ss_dssp GTTTSEEEEESCTTCHHHHHHHHHTCCS-EEEEEES
T ss_pred hcCCCcEEEeCCCCCHHHHHHHHHcCCC-EEEEECC
Confidence 3478999999999999999999998664 7888766
No 195
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=85.61 E-value=6.3 Score=38.89 Aligned_cols=39 Identities=18% Similarity=0.159 Sum_probs=29.8
Q ss_pred HhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEeec
Q 012978 201 SMGNVAANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 201 ~~anI~~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+++++|.+|||.+.+. |++++.+|..+|. .+|+....
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~ 228 (376)
T 1e3i_A 189 NTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGA-SRIIAIDI 228 (376)
T ss_dssp TTSCCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECS
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcC
Confidence 568999999999998633 7888888888864 35766643
No 196
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=85.51 E-value=0.83 Score=43.20 Aligned_cols=35 Identities=17% Similarity=0.035 Sum_probs=28.5
Q ss_pred cCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 203 GNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 203 anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.++.+|++||+++.+.|..+..++++ |. .|+.+..
T Consensus 64 ~~~~~~~~vLD~GCG~G~~~~~La~~-G~--~V~gvD~ 98 (252)
T 2gb4_A 64 LKGQSGLRVFFPLCGKAIEMKWFADR-GH--TVVGVEI 98 (252)
T ss_dssp HTTCCSCEEEETTCTTCTHHHHHHHT-TC--EEEEECS
T ss_pred ccCCCCCeEEEeCCCCcHHHHHHHHC-CC--eEEEEEC
Confidence 35678999999999999999999886 32 6777755
No 197
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=85.43 E-value=1.2 Score=43.36 Aligned_cols=45 Identities=20% Similarity=0.299 Sum_probs=39.6
Q ss_pred hHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecC
Q 012978 194 DMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIG 241 (452)
Q Consensus 194 DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~ 241 (452)
..+..|+..+++.+|.+||.++.|.|.+|..++++ + ++|+.++..
T Consensus 37 ~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~-~--~~V~aVEid 81 (295)
T 3gru_A 37 NFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN-A--KKVYVIEID 81 (295)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-S--SEEEEEESC
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc-C--CEEEEEECC
Confidence 45788999999999999999999999999999998 3 588888763
No 198
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=85.35 E-value=0.53 Score=46.50 Aligned_cols=48 Identities=10% Similarity=0.126 Sum_probs=34.0
Q ss_pred cCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHH
Q 012978 351 NGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQ 400 (452)
Q Consensus 351 ~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~ 400 (452)
+.||.++++.| +....++..+...|+|+|.+++++.... ..+....++
T Consensus 257 ~~fD~Vi~dpP-~~~~~~l~~~~~~L~~gG~l~~~~~~~~-~~~~~~~l~ 304 (336)
T 2yx1_A 257 VKGNRVIMNLP-KFAHKFIDKALDIVEEGGVIHYYTIGKD-FDKAIKLFE 304 (336)
T ss_dssp CCEEEEEECCT-TTGGGGHHHHHHHEEEEEEEEEEEEESS-SHHHHHHHH
T ss_pred CCCcEEEECCc-HhHHHHHHHHHHHcCCCCEEEEEEeecC-chHHHHHHH
Confidence 57998888765 4577899999999999998887644432 333333444
No 199
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=85.31 E-value=4 Score=40.83 Aligned_cols=42 Identities=21% Similarity=0.086 Sum_probs=32.7
Q ss_pred HHHHhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEeec
Q 012978 198 LLLSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 198 ~iL~~anI~~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~~ 240 (452)
+.|..+++++|.+|||.+.+. |++++.+|..+|. ++|+.+..
T Consensus 176 ~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~ 218 (398)
T 2dph_A 176 HGCVSAGVKPGSHVYIAGAGPVGRCAAAGARLLGA-ACVIVGDQ 218 (398)
T ss_dssp HHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHTC-SEEEEEES
T ss_pred HHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcC
Confidence 344678999999999999644 8888889988864 47777754
No 200
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=85.19 E-value=5.1 Score=36.51 Aligned_cols=34 Identities=9% Similarity=0.010 Sum_probs=28.3
Q ss_pred CCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 204 NVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 204 nI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.+.+|.+||.++.+.|.++..++.+.. +|+.+..
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~ 86 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFFP---RVIGLDV 86 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHSS---CEEEEES
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEEC
Confidence 378999999999999999999998743 6776654
No 201
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=85.18 E-value=7.3 Score=38.13 Aligned_cols=40 Identities=30% Similarity=0.357 Sum_probs=30.7
Q ss_pred HHhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEeec
Q 012978 200 LSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 200 L~~anI~~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~~ 240 (452)
+..+++++|.+|||.+.++ |++++.+|..+|. .+|+.+..
T Consensus 164 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~ 204 (356)
T 1pl8_A 164 CRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGA-AQVVVTDL 204 (356)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEEES
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECC
Confidence 4567999999999999644 8888888888764 36776653
No 202
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=85.12 E-value=6.6 Score=38.73 Aligned_cols=39 Identities=21% Similarity=0.263 Sum_probs=29.7
Q ss_pred HhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEeec
Q 012978 201 SMGNVAANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 201 ~~anI~~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+++++|.+|||.+.+. |++++.+|..+|. .+|+....
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~~Vi~~~~ 224 (374)
T 2jhf_A 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGA-ARIIGVDI 224 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECS
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcC
Confidence 468999999999998633 7888888888864 25766643
No 203
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=84.99 E-value=0.39 Score=43.87 Aligned_cols=38 Identities=16% Similarity=0.131 Sum_probs=29.4
Q ss_pred HHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 197 SLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 197 a~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..++.+ +.++.+||.++.+.|.++..++.+ ..++.+..
T Consensus 25 ~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~ 62 (243)
T 3d2l_A 25 AWVLEQ--VEPGKRIADIGCGTGTATLLLADH----YEVTGVDL 62 (243)
T ss_dssp HHHHHH--SCTTCEEEEESCTTCHHHHHHTTT----SEEEEEES
T ss_pred HHHHHH--cCCCCeEEEecCCCCHHHHHHhhC----CeEEEEEC
Confidence 344443 567899999999999999998876 57777765
No 204
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=84.95 E-value=0.63 Score=43.00 Aligned_cols=32 Identities=3% Similarity=-0.087 Sum_probs=26.0
Q ss_pred cCcceEEEeCCCCChHHHHHhHHhcccCCCcEEE
Q 012978 351 NGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAI 384 (452)
Q Consensus 351 ~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VV 384 (452)
+.||-++|+.. . ....+..++++|+|+|.+|+
T Consensus 121 ~~fDlIfIDg~-k-~~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 121 RHPDVVLVDGR-F-RVGCALATAFSITRPVTLLF 152 (202)
T ss_dssp CCCSEEEECSS-S-HHHHHHHHHHHCSSCEEEEE
T ss_pred CCCCEEEEeCC-C-chhHHHHHHHhcCCCeEEEE
Confidence 57999999984 2 45778889999999988754
No 205
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=84.85 E-value=7.5 Score=37.97 Aligned_cols=39 Identities=26% Similarity=0.296 Sum_probs=30.1
Q ss_pred HHHhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEee
Q 012978 199 LLSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTC 239 (452)
Q Consensus 199 iL~~anI~~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~ 239 (452)
.+..+++++|.+|||.+.+. |++++.+|..+|.. |+...
T Consensus 160 al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~--Vi~~~ 199 (352)
T 1e3j_A 160 ACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF--VVCTA 199 (352)
T ss_dssp HHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCE--EEEEE
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCE--EEEEc
Confidence 34568999999999998643 78888888888763 66554
No 206
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=84.47 E-value=2.7 Score=41.49 Aligned_cols=38 Identities=26% Similarity=0.312 Sum_probs=30.1
Q ss_pred HhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEeec
Q 012978 201 SMGNVAANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 201 ~~anI~~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+++++|.+|||.+.+. |++++.+|..+|- +|+....
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga--~Vi~~~~ 221 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAKATGA--EVIVTSS 221 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC--EEEEEES
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC--EEEEEec
Confidence 468999999999999533 8888888988876 6776643
No 207
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=84.35 E-value=2.8 Score=37.48 Aligned_cols=39 Identities=21% Similarity=0.083 Sum_probs=30.5
Q ss_pred HHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 199 LLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 199 iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+..+....++.+||.++.+.|.++..++++ | ..|+.+..
T Consensus 43 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~--~~v~~vD~ 81 (216)
T 3ofk_A 43 LRLSLSSGAVSNGLEIGCAAGAFTEKLAPH-C--KRLTVIDV 81 (216)
T ss_dssp HHHHTTTSSEEEEEEECCTTSHHHHHHGGG-E--EEEEEEES
T ss_pred HHHHcccCCCCcEEEEcCCCCHHHHHHHHc-C--CEEEEEEC
Confidence 334667788999999999999999999887 2 36666654
No 208
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=84.16 E-value=1.6 Score=39.92 Aligned_cols=34 Identities=21% Similarity=-0.125 Sum_probs=28.2
Q ss_pred CCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 204 NVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 204 nI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
...+|.+||.++.+.|.++.+++.+ | +.|+.++.
T Consensus 75 ~~~~~~~vLD~gcG~G~~~~~la~~-~--~~v~~vD~ 108 (241)
T 3gdh_A 75 QSFKCDVVVDAFCGVGGNTIQFALT-G--MRVIAIDI 108 (241)
T ss_dssp HHSCCSEEEETTCTTSHHHHHHHHT-T--CEEEEEES
T ss_pred hccCCCEEEECccccCHHHHHHHHc-C--CEEEEEEC
Confidence 3347999999999999999999986 3 67887765
No 209
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=83.87 E-value=2.6 Score=40.60 Aligned_cols=44 Identities=20% Similarity=0.145 Sum_probs=34.2
Q ss_pred HHHHHHhcCC--CCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 196 LSLLLSMGNV--AANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 196 La~iL~~anI--~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
...++...+. .++.+||.++.+.|.++.+++++.. ..+++.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~ 197 (335)
T 2r3s_A 152 AQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNP-NAEIFGVDW 197 (335)
T ss_dssp HHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC
T ss_pred HHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEEec
Confidence 4456666676 8899999999999999999999873 346666654
No 210
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=83.31 E-value=3.8 Score=41.20 Aligned_cols=33 Identities=21% Similarity=-0.083 Sum_probs=28.5
Q ss_pred CCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 207 ANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 207 ~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+|.+||.+.++.|.++..++.++|+ ..|+.++.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~-~~V~avDi 79 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPA-EEVWLNDI 79 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSC-SEEEEEES
T ss_pred CCCEEEECCCchhHHHHHHHHhCCC-CeEEEEEC
Confidence 6899999999999999999999865 46887766
No 211
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=83.31 E-value=6 Score=39.02 Aligned_cols=39 Identities=26% Similarity=0.256 Sum_probs=30.0
Q ss_pred HhcCCC-----CCCeEEEEeCCC--cHHHHHHHHHhCCCceEEEeec
Q 012978 201 SMGNVA-----ANSDVLVVDMAG--GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 201 ~~anI~-----~g~rvLv~d~~~--GlltaAv~ermgg~G~v~~~~~ 240 (452)
..++++ +|.+|||.+.++ |+++..+|..+||. +|+....
T Consensus 160 ~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~-~Vi~~~~ 205 (363)
T 4dvj_A 160 DRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDL-TVIATAS 205 (363)
T ss_dssp TTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCS-EEEEECS
T ss_pred HhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCC-EEEEEeC
Confidence 567888 899999998433 88888888887664 7776654
No 212
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=82.92 E-value=1.6 Score=42.15 Aligned_cols=48 Identities=15% Similarity=0.187 Sum_probs=41.1
Q ss_pred hHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCC-CceEEEeecC
Q 012978 194 DMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGG-TGYVCNTCIG 241 (452)
Q Consensus 194 DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg-~G~v~~~~~~ 241 (452)
..+..|+..+++.+|.+||.++.|.|.+|.+++++.+. .|.|+.++..
T Consensus 29 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid 77 (279)
T 3uzu_A 29 GVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELD 77 (279)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECC
T ss_pred HHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECC
Confidence 34677889999999999999999999999999998654 4779998763
No 213
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=82.85 E-value=4.6 Score=39.52 Aligned_cols=42 Identities=24% Similarity=0.325 Sum_probs=31.8
Q ss_pred HHHHhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEeec
Q 012978 198 LLLSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 198 ~iL~~anI~~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~~ 240 (452)
+.+..+++++|.+|||.+.+. |+++..+|..+|. .+|+.+..
T Consensus 157 ~al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~~Vi~~~~ 199 (352)
T 3fpc_A 157 HGAELANIKLGDTVCVIGIGPVGLMSVAGANHLGA-GRIFAVGS 199 (352)
T ss_dssp HHHHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTC-SSEEEECC
T ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEECC
Confidence 345778999999999998643 8888888887754 36777643
No 214
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=82.74 E-value=2 Score=43.32 Aligned_cols=33 Identities=24% Similarity=0.119 Sum_probs=27.4
Q ss_pred CCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 205 VAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 205 I~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+|.+||.++.+.|.++.+++.+ | ..|+.++.
T Consensus 231 ~~~~~~VLDlGcG~G~~~~~la~~-g--~~V~gvDi 263 (381)
T 3dmg_A 231 GVRGRQVLDLGAGYGALTLPLARM-G--AEVVGVED 263 (381)
T ss_dssp TTTTCEEEEETCTTSTTHHHHHHT-T--CEEEEEES
T ss_pred CCCCCEEEEEeeeCCHHHHHHHHc-C--CEEEEEEC
Confidence 347899999999999999999987 3 37777765
No 215
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=82.49 E-value=3.3 Score=38.47 Aligned_cols=40 Identities=5% Similarity=0.037 Sum_probs=30.0
Q ss_pred cCcceEEEeCC----CCChHHHHHhHHhcccCCCcEEEEeCChH
Q 012978 351 NGFSSMIVVAP----ELDPWSFVKDLLPLLSYSAPFAIYHQYLQ 390 (452)
Q Consensus 351 ~~~D~liia~~----~~dP~~il~~ll~~L~pS~p~VVYsp~~e 390 (452)
+.||.++.... ..+|..++..+...|+|+|.+++-.+...
T Consensus 113 ~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 156 (260)
T 2avn_A 113 GAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNFY 156 (260)
T ss_dssp TCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBHH
T ss_pred CCEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCChH
Confidence 56886665320 13688999999999999999998777654
No 216
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=81.95 E-value=1.7 Score=40.29 Aligned_cols=48 Identities=8% Similarity=-0.047 Sum_probs=35.1
Q ss_pred hhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHh-CCCceEEEeec
Q 012978 193 VDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERL-GGTGYVCNTCI 240 (452)
Q Consensus 193 ~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~erm-gg~G~v~~~~~ 240 (452)
.+.+..++......++.+||.++.++|.++.+++.++ ++.+.|+.++.
T Consensus 37 ~~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDi 85 (250)
T 1o9g_A 37 TEIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDV 85 (250)
T ss_dssp HHHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEES
T ss_pred HHHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEEC
Confidence 3445555655554578899999999999999999985 33457777765
No 217
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=81.78 E-value=4.1 Score=40.34 Aligned_cols=40 Identities=25% Similarity=0.263 Sum_probs=30.9
Q ss_pred HHhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEeec
Q 012978 200 LSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 200 L~~anI~~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~~ 240 (452)
+..+++++|.+|||.+.+. |+++..+|..+|. .+|+....
T Consensus 175 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~ 215 (370)
T 4ej6_A 175 VDLSGIKAGSTVAILGGGVIGLLTVQLARLAGA-TTVILSTR 215 (370)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECS
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECC
Confidence 4678999999999998744 8888888888765 36666543
No 218
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=81.77 E-value=9.2 Score=38.22 Aligned_cols=36 Identities=19% Similarity=0.310 Sum_probs=27.8
Q ss_pred cCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEee
Q 012978 203 GNVAANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTC 239 (452)
Q Consensus 203 anI~~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~ 239 (452)
+++++|.+|||.+.+. |+++..+|..+|- .+|+.+.
T Consensus 209 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~ 245 (404)
T 3ip1_A 209 GGIRPGDNVVILGGGPIGLAAVAILKHAGA-SKVILSE 245 (404)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEEC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEC
Confidence 5899999999998733 7888888887754 3676664
No 219
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=81.56 E-value=2.3 Score=39.63 Aligned_cols=47 Identities=19% Similarity=0.285 Sum_probs=41.0
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecCC
Q 012978 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIGD 242 (452)
Q Consensus 196 La~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~~ 242 (452)
+..|+...++.+|.+||.++.+.|.++..++++.|..+.|+.+....
T Consensus 32 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~ 78 (275)
T 3bkx_A 32 RLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIAS 78 (275)
T ss_dssp HHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSC
T ss_pred HHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCc
Confidence 45677778899999999999999999999999988778999887654
No 220
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=81.39 E-value=8.1 Score=38.43 Aligned_cols=42 Identities=26% Similarity=0.204 Sum_probs=31.4
Q ss_pred HHHHhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEeec
Q 012978 198 LLLSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 198 ~iL~~anI~~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~~ 240 (452)
+.|..+++++|.+|||.+.+. |+++..+|..+|.. +|+....
T Consensus 176 ~al~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~-~Vi~~~~ 218 (398)
T 1kol_A 176 HGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAA-VVIVGDL 218 (398)
T ss_dssp HHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCS-EEEEEES
T ss_pred HHHHHcCCCCCCEEEEECCcHHHHHHHHHHHHCCCC-eEEEEcC
Confidence 334578999999999999643 88888899888652 5666643
No 221
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=81.33 E-value=3.1 Score=40.25 Aligned_cols=52 Identities=12% Similarity=0.343 Sum_probs=36.1
Q ss_pred hcCcceEEEeCCCCCh-HHHHHhHHhcccCCCcEEEEeCCh--HHHHHHHHHHHhc
Q 012978 350 ENGFSSMIVVAPELDP-WSFVKDLLPLLSYSAPFAIYHQYL--QPLATCMHSLQVR 402 (452)
Q Consensus 350 ~~~~D~liia~~~~dP-~~il~~ll~~L~pS~p~VVYsp~~--epL~e~~~~L~~~ 402 (452)
.+.||-++||+-.++| ...++.++|.|+|+|-||+ -.|. .-..++...+...
T Consensus 207 ~~~~d~vfIDaD~y~~~~~~Le~~~p~L~pGGiIv~-DD~~~~~G~~~Av~Ef~~~ 261 (282)
T 2wk1_A 207 IDTLAVLRMDGDLYESTWDTLTNLYPKVSVGGYVIV-DDYMMCPPCKDAVDEYRAK 261 (282)
T ss_dssp CCCEEEEEECCCSHHHHHHHHHHHGGGEEEEEEEEE-SSCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEEEcCCccccHHHHHHHHHhhcCCCEEEEE-cCCCCCHHHHHHHHHHHHh
Confidence 3579999999954455 4789999999999886655 3332 3345666666543
No 222
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=81.05 E-value=7.9 Score=37.63 Aligned_cols=37 Identities=14% Similarity=0.212 Sum_probs=29.8
Q ss_pred cCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEeec
Q 012978 203 GNVAANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 203 anI~~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~~ 240 (452)
+++++|.+|||.+.+. |+++..+|..+|+. +|+.+..
T Consensus 167 ~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~-~Vi~~~~ 204 (345)
T 3jv7_A 167 PLLGPGSTAVVIGVGGLGHVGIQILRAVSAA-RVIAVDL 204 (345)
T ss_dssp GGCCTTCEEEEECCSHHHHHHHHHHHHHCCC-EEEEEES
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-EEEEEcC
Confidence 4899999999998744 88899999999763 6776654
No 223
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=80.41 E-value=8.1 Score=37.63 Aligned_cols=41 Identities=27% Similarity=0.165 Sum_probs=30.5
Q ss_pred HHHHhcCCCCCCeEEEEeCCC--cHHHHHHHHHhCCCceEEEeec
Q 012978 198 LLLSMGNVAANSDVLVVDMAG--GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 198 ~iL~~anI~~g~rvLv~d~~~--GlltaAv~ermgg~G~v~~~~~ 240 (452)
+.|..+++++|.+|||.+.++ |+.++.++..+|. +|+....
T Consensus 160 ~~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga--~V~~~~~ 202 (347)
T 2hcy_A 160 KALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGY--RVLGIDG 202 (347)
T ss_dssp HHHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEEC
T ss_pred HHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC--cEEEEcC
Confidence 445567899999999999854 6777777777764 6776654
No 224
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=79.85 E-value=7.8 Score=34.52 Aligned_cols=39 Identities=21% Similarity=0.351 Sum_probs=29.7
Q ss_pred cCcceEEEeCC--CC---ChHHHHHhHHhcccCCCcEEEEeCCh
Q 012978 351 NGFSSMIVVAP--EL---DPWSFVKDLLPLLSYSAPFAIYHQYL 389 (452)
Q Consensus 351 ~~~D~liia~~--~~---dP~~il~~ll~~L~pS~p~VVYsp~~ 389 (452)
+.||.++.... .+ +|..++..+...|+|+|.+++..+..
T Consensus 102 ~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 145 (227)
T 1ve3_A 102 KTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTDL 145 (227)
T ss_dssp TCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecCh
Confidence 57897776543 22 45678999999999999999887764
No 225
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=79.44 E-value=25 Score=33.83 Aligned_cols=42 Identities=21% Similarity=0.268 Sum_probs=31.0
Q ss_pred HHHHHhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEee
Q 012978 197 SLLLSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTC 239 (452)
Q Consensus 197 a~iL~~anI~~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~ 239 (452)
.+.+..+++.+|.+|||.+.++ |++++.+|..+|.. .++...
T Consensus 150 ~~~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~-~vi~~~ 192 (346)
T 4a2c_A 150 LHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAK-SVTAID 192 (346)
T ss_dssp HHHHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCS-EEEEEE
T ss_pred HHHHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCc-EEEEEe
Confidence 3566788999999999998744 77777788887764 444443
No 226
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=79.34 E-value=3 Score=40.97 Aligned_cols=41 Identities=27% Similarity=0.233 Sum_probs=31.2
Q ss_pred HHHhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEeec
Q 012978 199 LLSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 199 iL~~anI~~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~~ 240 (452)
.|..+++++|.+|||.+.+. |+++..+|..+|-. .|+....
T Consensus 171 ~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~-~Vi~~~~ 212 (363)
T 3m6i_A 171 GLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGAC-PLVITDI 212 (363)
T ss_dssp HHHHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCC-SEEEEES
T ss_pred HHHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-EEEEECC
Confidence 35678999999999998744 88888888888653 4665543
No 227
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=79.26 E-value=2.2 Score=39.10 Aligned_cols=34 Identities=21% Similarity=-0.024 Sum_probs=27.4
Q ss_pred CCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 205 VAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 205 I~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..++.+||.++.+.|.++.+++.+. .+.|+.+..
T Consensus 77 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~ 110 (241)
T 2ex4_A 77 KTGTSCALDCGAGIGRITKRLLLPL--FREVDMVDI 110 (241)
T ss_dssp CCCCSEEEEETCTTTHHHHHTTTTT--CSEEEEEES
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeC
Confidence 3468999999999999999988875 346777754
No 228
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=78.99 E-value=6.1 Score=38.16 Aligned_cols=38 Identities=26% Similarity=0.245 Sum_probs=29.8
Q ss_pred HhcCCCCCCeEEEEeCCC--cHHHHHHHHHhCCCceEEEeec
Q 012978 201 SMGNVAANSDVLVVDMAG--GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 201 ~~anI~~g~rvLv~d~~~--GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+++++|.+|||.+.++ |++++.++..+|. +|+....
T Consensus 134 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga--~Vi~~~~ 173 (325)
T 3jyn_A 134 QTYQVKPGEIILFHAAAGGVGSLACQWAKALGA--KLIGTVS 173 (325)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC--EEEEEES
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC--EEEEEeC
Confidence 457899999999998533 8888888888876 6776654
No 229
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=78.56 E-value=7.6 Score=37.72 Aligned_cols=38 Identities=18% Similarity=0.107 Sum_probs=30.8
Q ss_pred HhcCCCCCCeEEEEeCCC--cHHHHHHHHHhCCCceEEEeec
Q 012978 201 SMGNVAANSDVLVVDMAG--GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 201 ~~anI~~g~rvLv~d~~~--GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+++++|.+|||.+.++ |++++.++..+|. +|+....
T Consensus 138 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga--~Vi~~~~ 177 (340)
T 3gms_A 138 ETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF--RLIAVTR 177 (340)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC--EEEEEES
T ss_pred HhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC--EEEEEeC
Confidence 568999999999998764 8888888888875 6776654
No 230
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=78.45 E-value=4.3 Score=41.35 Aligned_cols=43 Identities=21% Similarity=0.098 Sum_probs=36.1
Q ss_pred HHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 195 MLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 195 tLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.+..++.++++.+|.+||.++.+.|.++.+++.+ .+.|+.++.
T Consensus 274 l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~ 316 (433)
T 1uwv_A 274 MVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEG 316 (433)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEES
T ss_pred HHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeC
Confidence 3556677778889999999999999999999987 357888876
No 231
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=78.29 E-value=9.6 Score=36.80 Aligned_cols=38 Identities=24% Similarity=0.353 Sum_probs=29.8
Q ss_pred HhcCCCCCCeEEEEeCCC--cHHHHHHHHHhCCCceEEEeec
Q 012978 201 SMGNVAANSDVLVVDMAG--GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 201 ~~anI~~g~rvLv~d~~~--GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+++++|.+|||.+.++ |+.++.++..+|- +|+....
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga--~Vi~~~~ 182 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLKGC--RVVGIAG 182 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEES
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeC
Confidence 678999999999998755 7777777877765 6776654
No 232
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=78.02 E-value=2.1 Score=40.77 Aligned_cols=42 Identities=14% Similarity=0.229 Sum_probs=31.3
Q ss_pred cCcceEEEeC---CCCC---hHHHHHhHHhcccCCCcEEEEeCChHHH
Q 012978 351 NGFSSMIVVA---PELD---PWSFVKDLLPLLSYSAPFAIYHQYLQPL 392 (452)
Q Consensus 351 ~~~D~liia~---~~~d---P~~il~~ll~~L~pS~p~VVYsp~~epL 392 (452)
+.||.+++.. -..+ ...++..+...|+|+|.|++..+....+
T Consensus 149 ~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 196 (299)
T 3g2m_A 149 KRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAA 196 (299)
T ss_dssp CCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHH
T ss_pred CCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccc
Confidence 5789776541 1122 2678999999999999999988887765
No 233
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=78.00 E-value=8.8 Score=36.16 Aligned_cols=37 Identities=19% Similarity=0.098 Sum_probs=28.4
Q ss_pred hcCcceEEEeCC--CCChHHHHHhHHhcccCCCcEEEEe
Q 012978 350 ENGFSSMIVVAP--ELDPWSFVKDLLPLLSYSAPFAIYH 386 (452)
Q Consensus 350 ~~~~D~liia~~--~~dP~~il~~ll~~L~pS~p~VVYs 386 (452)
.+.||.++.+.- -++|...+..+...|+|+|.|++++
T Consensus 97 ~~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 97 PASVDVAIAAQAMHWFDLDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp SSCEEEEEECSCCTTCCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcccEEEEeeehhHhhHHHHHHHHHHHcCCCCEEEEEE
Confidence 357896666541 1467888999999999999998875
No 234
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=77.98 E-value=12 Score=36.27 Aligned_cols=41 Identities=17% Similarity=0.108 Sum_probs=31.4
Q ss_pred HHHHhcCCCCCCeEEEEeCC-CcHHHHHHHHHhCCCceEEEeec
Q 012978 198 LLLSMGNVAANSDVLVVDMA-GGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 198 ~iL~~anI~~g~rvLv~d~~-~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+.|..+++++|.+|||.+.+ -|++++.++..+|. +|+....
T Consensus 155 ~~l~~~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga--~Vi~~~~ 196 (339)
T 1rjw_A 155 KALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL--NVVAVDI 196 (339)
T ss_dssp HHHHHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC--EEEEECS
T ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC--EEEEEeC
Confidence 34455689999999999883 38888889888864 6776653
No 235
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=77.97 E-value=1.8 Score=41.07 Aligned_cols=44 Identities=14% Similarity=0.080 Sum_probs=38.8
Q ss_pred hHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 194 DMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 194 DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+..|+..+++.+|.+||.++.|.|.+|.+++++ | ++|+.++.
T Consensus 16 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~-~--~~V~avEi 59 (255)
T 3tqs_A 16 FVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE-C--DNLALVEI 59 (255)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT-S--SEEEEEEC
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh-C--CEEEEEEC
Confidence 45678999999999999999999999999999987 3 68888876
No 236
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=77.85 E-value=2.4 Score=38.29 Aligned_cols=32 Identities=16% Similarity=0.160 Sum_probs=26.5
Q ss_pred CCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 206 AANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 206 ~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.++.+||.++.+.|.++..++.+.. .++.+..
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~ 70 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG---DTAGLEL 70 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS---EEEEEES
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC---cEEEEeC
Confidence 6889999999999999999998842 6666654
No 237
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=77.77 E-value=7.5 Score=37.61 Aligned_cols=38 Identities=21% Similarity=0.240 Sum_probs=29.3
Q ss_pred HhcCCCCCCeEEEEeCCC--cHHHHHHHHHhCCCceEEEeec
Q 012978 201 SMGNVAANSDVLVVDMAG--GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 201 ~~anI~~g~rvLv~d~~~--GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+++++|.+|||.+.++ |++++.++..+|. +|+....
T Consensus 142 ~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga--~Vi~~~~ 181 (334)
T 3qwb_A 142 EAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA--HTIAVAS 181 (334)
T ss_dssp TTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTC--EEEEEES
T ss_pred HhccCCCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeC
Confidence 346899999999999433 8888888888875 6776654
No 238
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=77.67 E-value=3.9 Score=38.14 Aligned_cols=45 Identities=11% Similarity=0.211 Sum_probs=39.1
Q ss_pred hhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 193 VDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 193 ~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
...+..|+..+++.+|.+||.++.|.|.+|.+++++. +.|+.++.
T Consensus 16 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~ 60 (244)
T 1qam_A 16 KHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEI 60 (244)
T ss_dssp HHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECS
T ss_pred HHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC---CeEEEEEC
Confidence 3456788899999999999999999999999999983 68888875
No 239
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=77.62 E-value=4.5 Score=40.08 Aligned_cols=41 Identities=22% Similarity=0.207 Sum_probs=31.4
Q ss_pred HHHHhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEeec
Q 012978 198 LLLSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 198 ~iL~~anI~~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~~ 240 (452)
+.|..+++++|.+|||.+.+. |+++..+|..+|. +|+....
T Consensus 185 ~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga--~Vi~~~~ 226 (369)
T 1uuf_A 185 SPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA--HVVAFTT 226 (369)
T ss_dssp HHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC--EEEEEES
T ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHCCC--EEEEEeC
Confidence 445557999999999998744 8888889988876 4666654
No 240
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=77.52 E-value=11 Score=36.60 Aligned_cols=42 Identities=19% Similarity=0.174 Sum_probs=31.1
Q ss_pred HHHHhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEeec
Q 012978 198 LLLSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 198 ~iL~~anI~~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~~ 240 (452)
+.+..+++++|.+|||.+.++ |++++.+|.++|| .+|+....
T Consensus 154 ~~l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g-~~Vi~~~~ 196 (348)
T 4eez_A 154 KAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFG-AKVIAVDI 196 (348)
T ss_dssp HHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSC-CEEEEEES
T ss_pred eeecccCCCCCCEEEEEcCCCccHHHHHHHHHhCC-CEEEEEEC
Confidence 445678999999999998754 5666667777766 47777654
No 241
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=77.30 E-value=2.3 Score=40.16 Aligned_cols=45 Identities=16% Similarity=0.107 Sum_probs=39.0
Q ss_pred hHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 194 DMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 194 DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+..|+..+++.+|.+||.++.|.|.+|.+++++ |.++|+.++.
T Consensus 18 ~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~--~~~~v~avEi 62 (249)
T 3ftd_A 18 GVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH--PLKKLYVIEL 62 (249)
T ss_dssp HHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS--CCSEEEEECC
T ss_pred HHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc--CCCeEEEEEC
Confidence 44678899999999999999999999999999987 3568888875
No 242
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=77.10 E-value=5.9 Score=35.30 Aligned_cols=58 Identities=5% Similarity=-0.001 Sum_probs=37.5
Q ss_pred cCcceEEEeCCC--CChHHHHHhHHhcccCCCcEEEEeCCh--HHHHHHHHHHHhccCcccee
Q 012978 351 NGFSSMIVVAPE--LDPWSFVKDLLPLLSYSAPFAIYHQYL--QPLATCMHSLQVRKMAIGLQ 409 (452)
Q Consensus 351 ~~~D~liia~~~--~dP~~il~~ll~~L~pS~p~VVYsp~~--epL~e~~~~L~~~~~~v~l~ 409 (452)
+.||.++....- .+|..++..+...|+|+|.+++..+.. ....++...|+.. +|..+.
T Consensus 114 ~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~-Gf~~~~ 175 (215)
T 2zfu_A 114 ESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKL-GFKIVS 175 (215)
T ss_dssp TCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHT-TEEEEE
T ss_pred CCEeEEEEehhccccCHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHC-CCEEEE
Confidence 467866654311 368899999999999999998865433 1335555556554 354433
No 243
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=77.00 E-value=10 Score=33.38 Aligned_cols=37 Identities=22% Similarity=0.441 Sum_probs=27.1
Q ss_pred hcCCCCCCeEEEEeCCC--cHHHHHHHHHhCCCceEEEeec
Q 012978 202 MGNVAANSDVLVVDMAG--GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 202 ~anI~~g~rvLv~d~~~--GlltaAv~ermgg~G~v~~~~~ 240 (452)
.+++++|.+|||.+.++ |..++.++.+.|. +|+....
T Consensus 33 ~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~--~V~~~~~ 71 (198)
T 1pqw_A 33 VGRLSPGERVLIHSATGGVGMAAVSIAKMIGA--RIYTTAG 71 (198)
T ss_dssp TSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC--EEEEEES
T ss_pred HhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC--EEEEEeC
Confidence 57899999999998544 6667777777764 6666543
No 244
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=76.86 E-value=10 Score=36.91 Aligned_cols=38 Identities=21% Similarity=0.342 Sum_probs=29.2
Q ss_pred HhcCCC------CCCeEEEEeCCC--cHHHHHHHHHhCCCceEEEeec
Q 012978 201 SMGNVA------ANSDVLVVDMAG--GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 201 ~~anI~------~g~rvLv~d~~~--GlltaAv~ermgg~G~v~~~~~ 240 (452)
..++++ +|.+|||.+.++ |++++.++..+|. +|+....
T Consensus 138 ~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga--~Vi~~~~ 183 (346)
T 3fbg_A 138 DVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGL--RVITTAS 183 (346)
T ss_dssp TTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEECC
T ss_pred HhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCC--EEEEEeC
Confidence 467887 999999995433 8888888988875 6776643
No 245
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=76.83 E-value=10 Score=36.62 Aligned_cols=38 Identities=26% Similarity=0.415 Sum_probs=29.1
Q ss_pred HhcCCCCCCeEEEEeCCC--cHHHHHHHHHhCCCceEEEeec
Q 012978 201 SMGNVAANSDVLVVDMAG--GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 201 ~~anI~~g~rvLv~d~~~--GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+++++|.+|||.+.++ |+.++.++..+|. +|+....
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~--~V~~~~~ 188 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC--YVVGSAG 188 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEES
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeC
Confidence 468999999999999744 7777788887764 6766654
No 246
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=76.23 E-value=13 Score=36.01 Aligned_cols=41 Identities=20% Similarity=0.237 Sum_probs=30.6
Q ss_pred HHHH-hcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEeec
Q 012978 198 LLLS-MGNVAANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 198 ~iL~-~anI~~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~~ 240 (452)
+.+. .+++ +|.+|||.+.++ |++++.+|..+|. ++|+....
T Consensus 155 ~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga-~~Vi~~~~ 197 (343)
T 2dq4_A 155 HTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRASGA-GPILVSDP 197 (343)
T ss_dssp HHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHHTTC-CSEEEECS
T ss_pred HHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECC
Confidence 3344 7899 999999999833 7888888888864 36776654
No 247
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=76.10 E-value=4.1 Score=39.77 Aligned_cols=38 Identities=29% Similarity=0.381 Sum_probs=30.5
Q ss_pred HhcCCCCCCeEEEEeCCC--cHHHHHHHHHhCCCceEEEeec
Q 012978 201 SMGNVAANSDVLVVDMAG--GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 201 ~~anI~~g~rvLv~d~~~--GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+++++|.+|||.+.++ |++++.++..+|- +|+....
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga--~Vi~~~~ 192 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA--KVIAVVN 192 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEES
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC--EEEEEeC
Confidence 578999999999998744 8888888888875 6766654
No 248
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=75.80 E-value=3.6 Score=39.42 Aligned_cols=44 Identities=23% Similarity=0.154 Sum_probs=38.2
Q ss_pred hHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecC
Q 012978 194 DMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIG 241 (452)
Q Consensus 194 DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~ 241 (452)
..+..|+..+++.+| +||.++.|.|.+|.+++++ | +.|+.++..
T Consensus 34 ~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~-~--~~V~avEid 77 (271)
T 3fut_A 34 AHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEA-G--AEVTAIEKD 77 (271)
T ss_dssp HHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT-T--CCEEEEESC
T ss_pred HHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc-C--CEEEEEECC
Confidence 456789999999999 9999999999999999997 3 588888763
No 249
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=75.78 E-value=6.3 Score=38.62 Aligned_cols=47 Identities=15% Similarity=0.025 Sum_probs=37.3
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecCCC
Q 012978 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIGDS 243 (452)
Q Consensus 196 La~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~~~ 243 (452)
|-.|.-.-+|++|++||-++.+-|-.+-.++.+-|.. .|+.+..|..
T Consensus 83 L~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~-~V~avdvG~~ 129 (321)
T 3lkz_A 83 LRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQ-EVRGYTKGGP 129 (321)
T ss_dssp HHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEE-EEEEECCCST
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCC-EEEEEEcCCC
Confidence 5566666789999999999998888887777777665 8999988754
No 250
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=75.73 E-value=13 Score=36.06 Aligned_cols=41 Identities=17% Similarity=0.329 Sum_probs=30.8
Q ss_pred HHHHhcCCCCCCeEEEEeCCC--cHHHHHHHHHh-CCCceEEEeec
Q 012978 198 LLLSMGNVAANSDVLVVDMAG--GLLTGAVAERL-GGTGYVCNTCI 240 (452)
Q Consensus 198 ~iL~~anI~~g~rvLv~d~~~--GlltaAv~erm-gg~G~v~~~~~ 240 (452)
+.|..+++++|.+|||.+.++ |+.++.++.++ |. +|+....
T Consensus 161 ~~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga--~Vi~~~~ 204 (347)
T 1jvb_A 161 RAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA--TIIGVDV 204 (347)
T ss_dssp HHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC--EEEEEES
T ss_pred HHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCC--eEEEEcC
Confidence 344568999999999998874 67788888888 54 5666643
No 251
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=75.41 E-value=3.2 Score=39.25 Aligned_cols=44 Identities=9% Similarity=-0.044 Sum_probs=36.0
Q ss_pred hHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 194 DMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 194 DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+..|+..+++.+|.+||.++.|.|.+|. + .+ ++.+.|+.++.
T Consensus 8 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l-~~-~~~~~v~avEi 51 (252)
T 1qyr_A 8 FVIDSIVSAINPQKGQAMVEIGPGLAALTE-P-VG-ERLDQLTVIEL 51 (252)
T ss_dssp HHHHHHHHHHCCCTTCCEEEECCTTTTTHH-H-HH-TTCSCEEEECC
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCCcHHHH-h-hh-CCCCeEEEEEC
Confidence 456788889999999999999999999999 4 55 44444888876
No 252
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=75.16 E-value=3.9 Score=39.84 Aligned_cols=42 Identities=17% Similarity=-0.096 Sum_probs=33.3
Q ss_pred HHHHhcCCCC-CCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 198 LLLSMGNVAA-NSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 198 ~iL~~anI~~-g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.++...++.+ +.+||.++.+.|.++.+++++..+ .+++.+..
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~ 211 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQ-LTGQIWDL 211 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTT-CEEEEEEC
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCC-CeEEEEEC
Confidence 6777777877 899999999999999999988643 45655543
No 253
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=74.54 E-value=18 Score=34.83 Aligned_cols=38 Identities=29% Similarity=0.353 Sum_probs=28.1
Q ss_pred HhcCCCCCCeEEEEeCCC--cHHHHHHHHHhCCCceEEEeec
Q 012978 201 SMGNVAANSDVLVVDMAG--GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 201 ~~anI~~g~rvLv~d~~~--GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+++++|.+|||.+.++ |+.++.++.+.|. +|+....
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~--~V~~~~~ 178 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC--KVVGAAG 178 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC--EEEEEES
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC--EEEEEeC
Confidence 568999999999999744 6667777777665 6666543
No 254
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=74.22 E-value=8.9 Score=37.50 Aligned_cols=38 Identities=21% Similarity=0.233 Sum_probs=29.6
Q ss_pred HhcCCCCCCeEEEEeCCC--cHHHHHHHHHhCCCceEEEeec
Q 012978 201 SMGNVAANSDVLVVDMAG--GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 201 ~~anI~~g~rvLv~d~~~--GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+++++|.+|||.+.++ |++++.++..+|. +|+....
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga--~Vi~~~~ 200 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA--EVYATAG 200 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEES
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC--EEEEEeC
Confidence 568999999999996544 8888888888876 5766653
No 255
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=74.04 E-value=13 Score=36.86 Aligned_cols=42 Identities=19% Similarity=0.126 Sum_probs=30.7
Q ss_pred HHHHhcC-CCCCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEeec
Q 012978 198 LLLSMGN-VAANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 198 ~iL~~an-I~~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~~ 240 (452)
+.+..++ +++|.+|||.+.+. |++++.+|..+|. .+|+....
T Consensus 185 ~al~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~ 228 (380)
T 1vj0_A 185 HAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGA-ENVIVIAG 228 (380)
T ss_dssp HHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTB-SEEEEEES
T ss_pred HHHHhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCC-ceEEEEcC
Confidence 3345678 99999999999422 7888888888752 26776654
No 256
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=74.04 E-value=9.5 Score=37.27 Aligned_cols=45 Identities=13% Similarity=0.093 Sum_probs=35.5
Q ss_pred HHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 195 MLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 195 tLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
....++...+..++.+||.++.+.|.++.+++++. +..+++.+..
T Consensus 178 ~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~ 222 (359)
T 1x19_A 178 AIQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHF-PELDSTILNL 222 (359)
T ss_dssp HHHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHC-TTCEEEEEEC
T ss_pred hHHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHC-CCCeEEEEec
Confidence 34567777788899999999999999999999985 3446666654
No 257
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=73.94 E-value=16 Score=36.17 Aligned_cols=41 Identities=24% Similarity=0.212 Sum_probs=31.2
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 196 La~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
++.++.+++.. |.+||.+..+.|.++.+++.+ -+.|+.++.
T Consensus 203 ~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~ 243 (369)
T 3bt7_A 203 LEWALDVTKGS-KGDLLELYCGNGNFSLALARN---FDRVLATEI 243 (369)
T ss_dssp HHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGG---SSEEEEECC
T ss_pred HHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhc---CCEEEEEEC
Confidence 45666666665 688999999999999988863 357888876
No 258
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=73.36 E-value=11 Score=36.49 Aligned_cols=34 Identities=18% Similarity=0.198 Sum_probs=27.2
Q ss_pred CCCCCCeEEEEeCCC-cHHHHHHHHHh--CCCceEEEeec
Q 012978 204 NVAANSDVLVVDMAG-GLLTGAVAERL--GGTGYVCNTCI 240 (452)
Q Consensus 204 nI~~g~rvLv~d~~~-GlltaAv~erm--gg~G~v~~~~~ 240 (452)
++ +|.+|||.+.+. |++++.+|..+ |. +|+....
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga--~Vi~~~~ 204 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNI--TIVGISR 204 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTC--EEEEECS
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCC--EEEEEeC
Confidence 89 999999999843 88888999988 64 5766643
No 259
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=73.20 E-value=14 Score=36.28 Aligned_cols=38 Identities=21% Similarity=0.372 Sum_probs=29.6
Q ss_pred HhcCCCCCCeEEEEeC--CCcHHHHHHHHHhCCCceEEEeec
Q 012978 201 SMGNVAANSDVLVVDM--AGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 201 ~~anI~~g~rvLv~d~--~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+++++|.+|||.+. +-|+.++.+|..+|. +|+....
T Consensus 157 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga--~Vi~~~~ 196 (362)
T 2c0c_A 157 ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC--HVIGTCS 196 (362)
T ss_dssp HHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTC--EEEEEES
T ss_pred HhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC--EEEEEEC
Confidence 3579999999999994 448888888888865 5766654
No 260
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=72.83 E-value=8.3 Score=36.78 Aligned_cols=45 Identities=11% Similarity=-0.144 Sum_probs=33.1
Q ss_pred cCcceEEEeCCCC-------ChHHHHHhHHhcccCCCcEEEEeCChHHHHHH
Q 012978 351 NGFSSMIVVAPEL-------DPWSFVKDLLPLLSYSAPFAIYHQYLQPLATC 395 (452)
Q Consensus 351 ~~~D~liia~~~~-------dP~~il~~ll~~L~pS~p~VVYsp~~epL~e~ 395 (452)
+.||.++....-+ ++..++..+...|+|+|.|++-.|....|.+.
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~l~~~ 164 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELIRR 164 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHHH
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHHHHHH
Confidence 4789777654211 23588999999999999999999987655443
No 261
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=72.22 E-value=1.8 Score=40.19 Aligned_cols=33 Identities=18% Similarity=0.149 Sum_probs=26.3
Q ss_pred CCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 205 VAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 205 I~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+.++.+||.++.+.|.++..++.+ | ..|+.+..
T Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~~~-~--~~v~gvD~ 80 (263)
T 3pfg_A 48 SPKAASLLDVACGTGMHLRHLADS-F--GTVEGLEL 80 (263)
T ss_dssp CTTCCEEEEETCTTSHHHHHHTTT-S--SEEEEEES
T ss_pred CCCCCcEEEeCCcCCHHHHHHHHc-C--CeEEEEEC
Confidence 356899999999999999999887 3 36766654
No 262
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=71.01 E-value=9.2 Score=33.61 Aligned_cols=35 Identities=17% Similarity=0.063 Sum_probs=26.2
Q ss_pred CCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 204 NVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 204 nI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
...++.+||.++.+.|.++..++.+.|. .|+.+..
T Consensus 20 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~--~v~~vD~ 54 (209)
T 2p8j_A 20 ESNLDKTVLDCGAGGDLPPLSIFVEDGY--KTYGIEI 54 (209)
T ss_dssp HSSSCSEEEEESCCSSSCTHHHHHHTTC--EEEEEEC
T ss_pred ccCCCCEEEEECCCCCHHHHHHHHhCCC--EEEEEEC
Confidence 4567999999999999986666666543 6776654
No 263
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=70.94 E-value=11 Score=36.71 Aligned_cols=42 Identities=17% Similarity=-0.031 Sum_probs=33.2
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEe
Q 012978 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNT 238 (452)
Q Consensus 196 La~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~ 238 (452)
...++...++.++.+||.++.+.|.++.+++++.. ..+++.+
T Consensus 173 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~ 214 (348)
T 3lst_A 173 HLILARAGDFPATGTVADVGGGRGGFLLTVLREHP-GLQGVLL 214 (348)
T ss_dssp HHHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCT-TEEEEEE
T ss_pred HHHHHHhCCccCCceEEEECCccCHHHHHHHHHCC-CCEEEEe
Confidence 44677777888999999999999999999999864 2344444
No 264
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=70.64 E-value=15 Score=35.72 Aligned_cols=36 Identities=25% Similarity=0.266 Sum_probs=29.3
Q ss_pred HhcCCCCCCeEEEEeCCC--cHHHHHHHHHhCCCceEEEe
Q 012978 201 SMGNVAANSDVLVVDMAG--GLLTGAVAERLGGTGYVCNT 238 (452)
Q Consensus 201 ~~anI~~g~rvLv~d~~~--GlltaAv~ermgg~G~v~~~ 238 (452)
..+++++|.+|||.+.++ |++++.++..+|- +|+..
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga--~Vi~~ 181 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA--RVFAT 181 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEE
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC--EEEEE
Confidence 568999999999999433 8888889988876 67666
No 265
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=70.50 E-value=7.3 Score=38.47 Aligned_cols=43 Identities=9% Similarity=-0.039 Sum_probs=33.4
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEee
Q 012978 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTC 239 (452)
Q Consensus 196 La~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~ 239 (452)
+..++...+..++.+||.++.+.|.++.+++++. +..+++.+.
T Consensus 191 ~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D 233 (369)
T 3gwz_A 191 AGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLE 233 (369)
T ss_dssp HHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEE
T ss_pred HHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEc
Confidence 4556777788889999999999999999999985 333555553
No 266
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=69.96 E-value=15 Score=35.19 Aligned_cols=37 Identities=24% Similarity=0.300 Sum_probs=28.4
Q ss_pred hcCCCCCCeEEEEeCCC--cHHHHHHHHHhCCCceEEEeec
Q 012978 202 MGNVAANSDVLVVDMAG--GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 202 ~anI~~g~rvLv~d~~~--GlltaAv~ermgg~G~v~~~~~ 240 (452)
.+++++|.+|||.+.++ |+.++.++..+|. +|+....
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~--~V~~~~~ 173 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKALGA--KLIGTVG 173 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC--EEEEEES
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC--EEEEEeC
Confidence 68999999999999544 7777778887764 6766644
No 267
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=69.75 E-value=21 Score=34.63 Aligned_cols=40 Identities=28% Similarity=0.244 Sum_probs=29.5
Q ss_pred HHHhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEeec
Q 012978 199 LLSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 199 iL~~anI~~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~~ 240 (452)
.|..+++ +|.+|||.+.+. |++++.+|..+|. ++|+....
T Consensus 160 ~l~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga-~~Vi~~~~ 200 (348)
T 2d8a_A 160 TVLAGPI-SGKSVLITGAGPLGLLGIAVAKASGA-YPVIVSEP 200 (348)
T ss_dssp HHTTSCC-TTCCEEEECCSHHHHHHHHHHHHTTC-CSEEEECS
T ss_pred HHHhcCC-CCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECC
Confidence 3456789 999999999833 7888888888763 36776644
No 268
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=68.87 E-value=12 Score=40.70 Aligned_cols=34 Identities=18% Similarity=0.117 Sum_probs=27.5
Q ss_pred CCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 205 VAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 205 I~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+|.+||.+..+.|.++-+++. +|-+.|+.++.
T Consensus 537 ~~~g~~VLDlg~GtG~~sl~aa~--~ga~~V~aVD~ 570 (703)
T 3v97_A 537 MSKGKDFLNLFSYTGSATVHAGL--GGARSTTTVDM 570 (703)
T ss_dssp HCTTCEEEEESCTTCHHHHHHHH--TTCSEEEEEES
T ss_pred hcCCCcEEEeeechhHHHHHHHH--CCCCEEEEEeC
Confidence 34799999999999998887775 55567888876
No 269
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=68.65 E-value=22 Score=34.88 Aligned_cols=38 Identities=5% Similarity=-0.146 Sum_probs=29.2
Q ss_pred cCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeCChH
Q 012978 351 NGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQYLQ 390 (452)
Q Consensus 351 ~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp~~e 390 (452)
+++|.+|-++. .+...+...+..|+++|.+|.+.....
T Consensus 247 ~g~D~vid~~g--~~~~~~~~~~~~l~~~G~iv~~g~~~~ 284 (375)
T 2vn8_A 247 KPFDFILDNVG--GSTETWAPDFLKKWSGATYVTLVTPFL 284 (375)
T ss_dssp CCBSEEEESSC--TTHHHHGGGGBCSSSCCEEEESCCSHH
T ss_pred CCCCEEEECCC--ChhhhhHHHHHhhcCCcEEEEeCCCcc
Confidence 57996655543 566678899999999999999986543
No 270
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=68.63 E-value=48 Score=31.49 Aligned_cols=47 Identities=17% Similarity=0.041 Sum_probs=36.7
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecCCC
Q 012978 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIGDS 243 (452)
Q Consensus 196 La~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~~~ 243 (452)
|-.|.-.-.|++|.+||-++.+-|--+-.++.+-|.. +|+.+..|..
T Consensus 67 L~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~-~V~avdvG~~ 113 (267)
T 3p8z_A 67 LQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVT-EVRGYTKGGP 113 (267)
T ss_dssp HHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEE-EEEEECCCST
T ss_pred HHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCC-EEEEEecCCC
Confidence 4455555589999999999998888888777777666 8999988754
No 271
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=68.45 E-value=26 Score=30.73 Aligned_cols=40 Identities=8% Similarity=0.016 Sum_probs=29.4
Q ss_pred cCcceEEEeCCC---CChHHHHHhHHhcccCCCcEEEEeCChH
Q 012978 351 NGFSSMIVVAPE---LDPWSFVKDLLPLLSYSAPFAIYHQYLQ 390 (452)
Q Consensus 351 ~~~D~liia~~~---~dP~~il~~ll~~L~pS~p~VVYsp~~e 390 (452)
+.||.++....- .+|..++..+...|+|+|.+++-.+...
T Consensus 94 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 94 ESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEAL 136 (211)
T ss_dssp SCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred CcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCCc
Confidence 468866665311 2688899999999999999887766554
No 272
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=68.35 E-value=15 Score=35.18 Aligned_cols=43 Identities=12% Similarity=-0.012 Sum_probs=32.7
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 196 La~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
...++...+..+ .+||.++.+.|.++.+++++.. ..+++.+..
T Consensus 157 ~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~ 199 (334)
T 2ip2_A 157 FHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEP-SARGVMLDR 199 (334)
T ss_dssp HHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC
T ss_pred HHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCC-CCEEEEeCc
Confidence 345666666766 9999999999999999999873 346666654
No 273
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=67.63 E-value=4.9 Score=34.73 Aligned_cols=60 Identities=10% Similarity=0.144 Sum_probs=42.3
Q ss_pred hcCcceEEEeCCC----CChHHHHHhHHhcccCCCcEEEEeCChH---------HHHHHHHHHHhccCccceeeee
Q 012978 350 ENGFSSMIVVAPE----LDPWSFVKDLLPLLSYSAPFAIYHQYLQ---------PLATCMHSLQVRKMAIGLQISE 412 (452)
Q Consensus 350 ~~~~D~liia~~~----~dP~~il~~ll~~L~pS~p~VVYsp~~e---------pL~e~~~~L~~~~~~v~l~l~E 412 (452)
.+.||.++...-- .|+..++..+...|+|+|.|++..|... ++.++...|+..+ | +.+.|
T Consensus 61 ~~~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG-f--i~~~~ 133 (176)
T 2ld4_A 61 ESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSG-L--VEVKE 133 (176)
T ss_dssp SSCEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTT-C--EEEEE
T ss_pred CCCEeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCC-C--cEeec
Confidence 3579966653211 2789999999999999999999776432 2567777787654 6 44544
No 274
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=67.31 E-value=14 Score=37.64 Aligned_cols=71 Identities=11% Similarity=-0.037 Sum_probs=43.9
Q ss_pred CCChHHHHHHHHhcCcccccccchhHHHHHHHhcCCCCCCeEEEEeCC------CcHHHHHHHHHhCCCceEEEeecCC
Q 012978 170 RPFARSICEAYFKKNPARIGFLRVDMLSLLLSMGNVAANSDVLVVDMA------GGLLTGAVAERLGGTGYVCNTCIGD 242 (452)
Q Consensus 170 ~pt~~~l~e~y~~Kdp~Ki~~lR~DtLa~iL~~anI~~g~rvLv~d~~------~GlltaAv~ermgg~G~v~~~~~~~ 242 (452)
+|+...+++.| ..|+..-.+...+.+..+|..-. ..+.+||.++.+ .|..+..++.+..+.+.|+.+....
T Consensus 181 ~~~fd~lA~~Y-~tDK~~~~h~y~~~Ye~lL~~l~-~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp 257 (419)
T 3sso_A 181 KPDLSELSSRY-FTPKFGFLHWFTPHYDRHFRDYR-NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMD 257 (419)
T ss_dssp CCCHHHHHHHT-TCTTBSSSCBCHHHHHHHHGGGT-TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSC
T ss_pred CccHHHHHHHh-CCCcccccchHHHHHHHHHHhhc-CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCH
Confidence 34444444443 22332223344556666665433 356899999987 3556777888877788999997643
No 275
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=66.93 E-value=15 Score=41.10 Aligned_cols=45 Identities=11% Similarity=0.065 Sum_probs=35.2
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 196 La~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+..++.+....+|.+||.++.+.|.++.+++++.+..+.|+.+..
T Consensus 710 le~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDI 754 (950)
T 3htx_A 710 VEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDI 754 (950)
T ss_dssp HHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEES
T ss_pred HHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEEC
Confidence 344444445568999999999999999999887655678988876
No 276
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=66.64 E-value=28 Score=33.89 Aligned_cols=37 Identities=30% Similarity=0.302 Sum_probs=28.4
Q ss_pred hcCCCCCCeEEEEeCCC--cHHHHHHHHHhCCCceEEEeec
Q 012978 202 MGNVAANSDVLVVDMAG--GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 202 ~anI~~g~rvLv~d~~~--GlltaAv~ermgg~G~v~~~~~ 240 (452)
.+++++|.+|||.+.++ |+.++.++..+|. +|+....
T Consensus 165 ~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga--~Vi~~~~ 203 (351)
T 1yb5_A 165 SACVKAGESVLVHGASGGVGLAACQIARAYGL--KILGTAG 203 (351)
T ss_dssp TSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEES
T ss_pred hhCCCCcCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeC
Confidence 68999999999998744 7777777877764 5666543
No 277
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=66.26 E-value=15 Score=35.78 Aligned_cols=38 Identities=24% Similarity=0.149 Sum_probs=28.3
Q ss_pred HhcCCCCCCeEEEEeCCC--cHHHHHHHHHhCCCceEEEeec
Q 012978 201 SMGNVAANSDVLVVDMAG--GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 201 ~~anI~~g~rvLv~d~~~--GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+++++|.+|||.+.++ |+.++.++..+|. +|+....
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga--~Vi~~~~ 195 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGA--IPLVTAG 195 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEES
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC--EEEEEeC
Confidence 468999999999998544 7777777777764 6666543
No 278
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=65.61 E-value=4 Score=37.82 Aligned_cols=44 Identities=18% Similarity=0.216 Sum_probs=38.3
Q ss_pred HHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecC
Q 012978 195 MLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIG 241 (452)
Q Consensus 195 tLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~ 241 (452)
.+..|+..+++.+|.+||.++.|.|.++..++++ | +.|+.++..
T Consensus 17 ~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~-~--~~v~~id~~ 60 (245)
T 1yub_A 17 VLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI-S--KQVTSIELD 60 (245)
T ss_dssp THHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHH-S--SEEEESSSS
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHh-C--CeEEEEECC
Confidence 4678888999999999999999999999999998 3 688888764
No 279
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=65.57 E-value=6.7 Score=36.93 Aligned_cols=35 Identities=6% Similarity=-0.059 Sum_probs=26.3
Q ss_pred cCcceEEEeCCC-C------ChHHHHHhHHhcccCCCcEEEE
Q 012978 351 NGFSSMIVVAPE-L------DPWSFVKDLLPLLSYSAPFAIY 385 (452)
Q Consensus 351 ~~~D~liia~~~-~------dP~~il~~ll~~L~pS~p~VVY 385 (452)
+.||.++...-- + +|..++..+...|+|+|.|++.
T Consensus 173 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 173 LPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp SSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 458977665311 1 5778899999999999998874
No 280
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=65.36 E-value=9 Score=36.52 Aligned_cols=45 Identities=16% Similarity=0.155 Sum_probs=38.7
Q ss_pred hhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 193 VDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 193 ~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
...+..|+..+++.+|.+||.++.+.|.+|.+++++ | +.|+.++.
T Consensus 14 ~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~-~--~~v~~vD~ 58 (285)
T 1zq9_A 14 PLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK-A--KKVVACEL 58 (285)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH-S--SEEEEEES
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh-C--CEEEEEEC
Confidence 345788899999999999999999999999999998 3 47887775
No 281
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=65.04 E-value=11 Score=36.97 Aligned_cols=33 Identities=9% Similarity=-0.115 Sum_probs=25.9
Q ss_pred CCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEee
Q 012978 206 AANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTC 239 (452)
Q Consensus 206 ~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~ 239 (452)
..+.+||.++.+.|.++.+++++.. ..+++.+.
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D 210 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNK-EVEVTIVD 210 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHST-TCEEEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEe
Confidence 4578999999999999999999853 33555554
No 282
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=64.29 E-value=6.5 Score=38.22 Aligned_cols=45 Identities=11% Similarity=0.073 Sum_probs=39.0
Q ss_pred HHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 195 MLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 195 tLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.+..++.+.++.+|++||.+..+.|..+.+++++++ .|.|+.+..
T Consensus 14 Ll~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~ 58 (301)
T 1m6y_A 14 MVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDV 58 (301)
T ss_dssp THHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEES
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEEC
Confidence 456777778899999999999999999999999986 578998875
No 283
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=63.25 E-value=24 Score=33.95 Aligned_cols=37 Identities=24% Similarity=0.200 Sum_probs=28.8
Q ss_pred hcCCCCCCeEEEEeC--CCcHHHHHHHHHhCCCceEEEeec
Q 012978 202 MGNVAANSDVLVVDM--AGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 202 ~anI~~g~rvLv~d~--~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
.+++++|.+|||.+. +-|+.++.++..+|. +|+....
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~--~Vi~~~~ 178 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHLGA--TVIGTVS 178 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHTTC--EEEEEES
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHCCC--EEEEEeC
Confidence 689999999999985 447888888888764 6776654
No 284
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=62.05 E-value=33 Score=33.63 Aligned_cols=31 Identities=19% Similarity=0.000 Sum_probs=25.3
Q ss_pred CCCCeEEEEeCCC--cHHHHHHHHHhCCCceEEEe
Q 012978 206 AANSDVLVVDMAG--GLLTGAVAERLGGTGYVCNT 238 (452)
Q Consensus 206 ~~g~rvLv~d~~~--GlltaAv~ermgg~G~v~~~ 238 (452)
++|.+|||.+.++ |++++.+|..+|- +|+..
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga--~Vi~~ 195 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGY--IPIAT 195 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTC--EEEEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCC--EEEEE
Confidence 8999999998844 8888899988876 56655
No 285
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=61.69 E-value=6.7 Score=39.11 Aligned_cols=45 Identities=13% Similarity=0.068 Sum_probs=38.4
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 196 La~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
|.-++.+.+++||+.|+-+--|.|--|.++++++|+.|+||.+..
T Consensus 46 l~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~ 90 (347)
T 3tka_A 46 LDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDR 90 (347)
T ss_dssp THHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEES
T ss_pred HHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEEC
Confidence 566777779999998776666788999999999999999999975
No 286
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=61.61 E-value=95 Score=31.16 Aligned_cols=33 Identities=18% Similarity=0.151 Sum_probs=25.7
Q ss_pred CCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 206 AANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 206 ~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
++..|||+++-+.|.++..++.. .. .+|..++.
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh-~~-~~V~~VEI 236 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKL-KP-KMVTMVEI 236 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT-CC-SEEEEEES
T ss_pred CCCCeEEEECCCcHHHHHHHHhc-CC-ceeEEEcc
Confidence 45689999999999998888764 33 57777765
No 287
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=60.88 E-value=27 Score=34.16 Aligned_cols=37 Identities=24% Similarity=0.158 Sum_probs=29.1
Q ss_pred hcCCC--C-------CCeEEEEeCCC-cHHHHHHHHHhCCCceEEEeec
Q 012978 202 MGNVA--A-------NSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 202 ~anI~--~-------g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~~ 240 (452)
.++++ + |.+|||.+.++ |++++.++..+|. +|+....
T Consensus 166 ~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga--~Vi~~~~ 212 (366)
T 2cdc_A 166 QKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGL--EVWMANR 212 (366)
T ss_dssp GGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTC--EEEEEES
T ss_pred ccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCC--EEEEEeC
Confidence 78999 9 99999999822 7778888888875 6776654
No 288
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=60.22 E-value=17 Score=35.26 Aligned_cols=33 Identities=12% Similarity=0.122 Sum_probs=24.1
Q ss_pred hcCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEe
Q 012978 350 ENGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYH 386 (452)
Q Consensus 350 ~~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYs 386 (452)
..++|.+ +++- ....+..++..|+++|.+|++.
T Consensus 231 ~~g~D~v-id~~---g~~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 231 AEQPRIF-LDAV---TGPLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp HHCCCEE-EESS---CHHHHHHHHHHSCTTCEEEECC
T ss_pred CCCCcEE-EECC---CChhHHHHHhhhcCCCEEEEEe
Confidence 3589955 4442 2234588999999999999986
No 289
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=59.30 E-value=8.1 Score=37.19 Aligned_cols=44 Identities=18% Similarity=0.172 Sum_probs=37.6
Q ss_pred hHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 194 DMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 194 DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+..|+..+++.+|.+||.++.|.|.+|.+++++ | +.|+.++.
T Consensus 29 ~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~-~--~~v~~vDi 72 (299)
T 2h1r_A 29 GILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL-A--KKVITIDI 72 (299)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT-S--SEEEEECS
T ss_pred HHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc-C--CEEEEEEC
Confidence 44678888889999999999999999999999987 3 47888875
No 290
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=59.23 E-value=23 Score=33.45 Aligned_cols=36 Identities=28% Similarity=0.255 Sum_probs=27.9
Q ss_pred hcCCCCCCeEEEEeCCC--cHHHHHHHHHhCCCceEEEeec
Q 012978 202 MGNVAANSDVLVVDMAG--GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 202 ~anI~~g~rvLv~d~~~--GlltaAv~ermgg~G~v~~~~~ 240 (452)
.+ +++|.+|||.+.++ |+.++.++..+|. +|+....
T Consensus 121 ~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga--~Vi~~~~ 158 (302)
T 1iz0_A 121 AQ-ARPGEKVLVQAAAGALGTAAVQVARAMGL--RVLAAAS 158 (302)
T ss_dssp TT-CCTTCEEEESSTTBHHHHHHHHHHHHTTC--EEEEEES
T ss_pred hc-CCCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeC
Confidence 56 99999999999744 7778888888765 6776654
No 291
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=58.89 E-value=18 Score=36.74 Aligned_cols=35 Identities=17% Similarity=0.188 Sum_probs=27.6
Q ss_pred cCCCCCCeEEEEeCCC--cHHHHHHHHHhCCCceEEEee
Q 012978 203 GNVAANSDVLVVDMAG--GLLTGAVAERLGGTGYVCNTC 239 (452)
Q Consensus 203 anI~~g~rvLv~d~~~--GlltaAv~ermgg~G~v~~~~ 239 (452)
+++++|.+|||.+.++ |+++..+|..+|. +++.+.
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga--~vi~~~ 260 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGA--NPICVV 260 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCC--eEEEEE
Confidence 7999999999998744 8888888888865 555554
No 292
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=58.76 E-value=7.4 Score=37.57 Aligned_cols=40 Identities=18% Similarity=-0.083 Sum_probs=29.8
Q ss_pred HHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEe
Q 012978 198 LLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNT 238 (452)
Q Consensus 198 ~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~ 238 (452)
.++...+..++.+||.++.+.|.++.+++++..+ .+++.+
T Consensus 160 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~ 199 (332)
T 3i53_A 160 GIAAKYDWAALGHVVDVGGGSGGLLSALLTAHED-LSGTVL 199 (332)
T ss_dssp TGGGSSCCGGGSEEEEETCTTSHHHHHHHHHCTT-CEEEEE
T ss_pred HHHHhCCCCCCCEEEEeCCChhHHHHHHHHHCCC-CeEEEe
Confidence 3445555667899999999999999999998743 345444
No 293
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=58.32 E-value=13 Score=36.45 Aligned_cols=48 Identities=19% Similarity=0.203 Sum_probs=36.4
Q ss_pred chhHH-HHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecC
Q 012978 192 RVDML-SLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIG 241 (452)
Q Consensus 192 R~DtL-a~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~ 241 (452)
|.+.+ ..|+....+.+|.+||.++.+.|.++..++++ |.++|+.++..
T Consensus 48 r~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~gvD~s 96 (340)
T 2fyt_A 48 RTESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKA--GAKKVLGVDQS 96 (340)
T ss_dssp HHHHHHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEESS
T ss_pred HHHHHHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHc--CCCEEEEEChH
Confidence 33434 34555567789999999999999999998886 34689888763
No 294
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=57.07 E-value=21 Score=34.57 Aligned_cols=53 Identities=17% Similarity=0.102 Sum_probs=38.1
Q ss_pred HHHHhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEeecCCCCCchhhhhhcC
Q 012978 198 LLLSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTCIGDSLYPMDIVRIFN 254 (452)
Q Consensus 198 ~iL~~anI~~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~~~~~~~~~~~~~~~n 254 (452)
+.|..+++++|.+|||.+.+. |+++..+|..+|. +|+..... +..++.++.++
T Consensus 167 ~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga--~Vi~~~~~--~~~~~~~~~lG 220 (348)
T 3two_A 167 SPLKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGA--EVSVFARN--EHKKQDALSMG 220 (348)
T ss_dssp HHHHHTTCCTTCEEEEESCSHHHHHHHHHHHHTTC--EEEEECSS--STTHHHHHHTT
T ss_pred HHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCC--eEEEEeCC--HHHHHHHHhcC
Confidence 455667999999999998744 8888889988875 67766543 33555555555
No 295
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=56.88 E-value=18 Score=34.49 Aligned_cols=52 Identities=12% Similarity=0.053 Sum_probs=38.2
Q ss_pred HHHHhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEeecCCCCCchhhhhhcC
Q 012978 198 LLLSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTCIGDSLYPMDIVRIFN 254 (452)
Q Consensus 198 ~iL~~anI~~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~~~~~~~~~~~~~~~n 254 (452)
+.|..+++++|.+|||.+.+. |+++..+|..+|- +|+... ++..++.++.++
T Consensus 133 ~al~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga--~Vi~~~---~~~~~~~~~~lG 185 (315)
T 3goh_A 133 QAFEKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY--VVDLVS---ASLSQALAAKRG 185 (315)
T ss_dssp HHHTTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC--EEEEEC---SSCCHHHHHHHT
T ss_pred HHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC--EEEEEE---ChhhHHHHHHcC
Confidence 344678999999999999833 8999999999876 777775 334555555444
No 296
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=55.61 E-value=55 Score=31.59 Aligned_cols=39 Identities=28% Similarity=0.504 Sum_probs=28.6
Q ss_pred HhcCCCCC--CeEEEEeCCC--cHHHHHHHHHhCCCceEEEeec
Q 012978 201 SMGNVAAN--SDVLVVDMAG--GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 201 ~~anI~~g--~rvLv~d~~~--GlltaAv~ermgg~G~v~~~~~ 240 (452)
..+++++| .+|||.+.++ |+.++.++..+|. ++|+....
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga-~~Vi~~~~ 194 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGC-SRVVGICG 194 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTC-SEEEEEES
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCC-CeEEEEeC
Confidence 57899999 9999998744 6667777777653 36766644
No 297
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=54.26 E-value=33 Score=33.11 Aligned_cols=36 Identities=25% Similarity=0.210 Sum_probs=28.6
Q ss_pred cCCCCCCeEEEEeC--CCcHHHHHHHHHhCCCceEEEeec
Q 012978 203 GNVAANSDVLVVDM--AGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 203 anI~~g~rvLv~d~--~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+++++|.+|||.+. +-|+.++.++..+|. +|+....
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~--~Vi~~~~ 199 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA--RVIATAG 199 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHTTC--EEEEEES
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeC
Confidence 69999999999987 348888888888865 6766644
No 298
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=53.97 E-value=52 Score=33.00 Aligned_cols=35 Identities=17% Similarity=0.215 Sum_probs=27.5
Q ss_pred cCCCCCCeEEEEeCCC--cHHHHHHHHHhCCCceEEEee
Q 012978 203 GNVAANSDVLVVDMAG--GLLTGAVAERLGGTGYVCNTC 239 (452)
Q Consensus 203 anI~~g~rvLv~d~~~--GlltaAv~ermgg~G~v~~~~ 239 (452)
+++++|.+|||.+.++ |++++.++..+|. +++...
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga--~vi~~~ 252 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGG--IPVAVV 252 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCC--EEEEEe
Confidence 8999999999998644 8888888888765 555554
No 299
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=51.26 E-value=25 Score=38.78 Aligned_cols=35 Identities=29% Similarity=0.431 Sum_probs=27.8
Q ss_pred hcCCCCCCeEEEEeCCC--cHHHHHHHHHhCCCceEEEe
Q 012978 202 MGNVAANSDVLVVDMAG--GLLTGAVAERLGGTGYVCNT 238 (452)
Q Consensus 202 ~anI~~g~rvLv~d~~~--GlltaAv~ermgg~G~v~~~ 238 (452)
.+++++|.+|||.+-++ |+.+..++..+|- +|+..
T Consensus 340 ~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga--~V~~t 376 (795)
T 3slk_A 340 LAGLRPGESLLVHSAAGGVGMAAIQLARHLGA--EVYAT 376 (795)
T ss_dssp CTCCCTTCCEEEESTTBHHHHHHHHHHHHTTC--CEEEE
T ss_pred HhCCCCCCEEEEecCCCHHHHHHHHHHHHcCC--EEEEE
Confidence 47899999999999654 7788888888876 56654
No 300
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=50.99 E-value=1.6e+02 Score=27.45 Aligned_cols=39 Identities=8% Similarity=-0.112 Sum_probs=29.0
Q ss_pred cCcceEEEeC-----CCCChHHHHHhHHhcccCCCcEEEEeCCh
Q 012978 351 NGFSSMIVVA-----PELDPWSFVKDLLPLLSYSAPFAIYHQYL 389 (452)
Q Consensus 351 ~~~D~liia~-----~~~dP~~il~~ll~~L~pS~p~VVYsp~~ 389 (452)
..||.+++.. +..+|..++..+...|+|+|.|++-....
T Consensus 156 ~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 156 SRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp TSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 3688777643 21237899999999999999988766543
No 301
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=50.63 E-value=39 Score=26.71 Aligned_cols=43 Identities=12% Similarity=-0.018 Sum_probs=31.0
Q ss_pred HHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhccCccceeee
Q 012978 368 FVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRKMAIGLQIS 411 (452)
Q Consensus 368 il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~~~v~l~l~ 411 (452)
+...+...|.++.++|+||..-..-..+...|+.. +|-++.+.
T Consensus 41 l~~~~~~~l~~~~~ivvyc~~g~rs~~a~~~L~~~-G~~~v~~l 83 (106)
T 3hix_A 41 LVDRASSSLEKSRDIYVYGAGDEQTSQAVNLLRSA-GFEHVSEL 83 (106)
T ss_dssp HHHHHHHHSCTTSCEEEECSSHHHHHHHHHHHHHT-TCSCEEEC
T ss_pred HHHHHHhcCCCCCeEEEEECCCChHHHHHHHHHHc-CCcCEEEe
Confidence 44455577889999999999877767777777764 46555543
No 302
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=50.34 E-value=31 Score=34.11 Aligned_cols=45 Identities=20% Similarity=0.187 Sum_probs=36.0
Q ss_pred HHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecCC
Q 012978 198 LLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIGD 242 (452)
Q Consensus 198 ~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~~ 242 (452)
.|+.+....++.+||..+.|+|.++.++++++++...|+.++...
T Consensus 30 ~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~ 74 (421)
T 2ih2_A 30 FMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDP 74 (421)
T ss_dssp HHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCT
T ss_pred HHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCH
Confidence 344445555678999999999999999999997777899888754
No 303
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=49.46 E-value=19 Score=31.99 Aligned_cols=42 Identities=21% Similarity=0.080 Sum_probs=33.6
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 196 La~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
|..++...++.+|.+||.++.+.|..+..++++ | ..|+.+..
T Consensus 11 l~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~-g--~~V~gvD~ 52 (203)
T 1pjz_A 11 LQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQ-G--YHVVGAEL 52 (203)
T ss_dssp HHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHH-C--CEEEEEEE
T ss_pred HHHHHHhcccCCCCEEEEeCCCCcHhHHHHHHC-C--CeEEEEeC
Confidence 444555567889999999999999999999987 3 27887765
No 304
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=49.43 E-value=33 Score=33.36 Aligned_cols=42 Identities=19% Similarity=0.184 Sum_probs=29.6
Q ss_pred HHHhcCCCCC------CeEEEEeCCC-cHHH-HHHH-HHhCCCceEEEeecC
Q 012978 199 LLSMGNVAAN------SDVLVVDMAG-GLLT-GAVA-ERLGGTGYVCNTCIG 241 (452)
Q Consensus 199 iL~~anI~~g------~rvLv~d~~~-Gllt-aAv~-ermgg~G~v~~~~~~ 241 (452)
.|..+++++| .+|||.+.+. |+++ ..+| ..+|. .+|+.+...
T Consensus 158 al~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga-~~Vi~~~~~ 208 (357)
T 2b5w_A 158 ALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGY-ENLYCLGRR 208 (357)
T ss_dssp HHHHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCC-CEEEEEECC
T ss_pred HHHhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCC-cEEEEEeCC
Confidence 3456789999 9999999732 6777 7777 66654 247777653
No 305
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=49.07 E-value=24 Score=30.81 Aligned_cols=35 Identities=17% Similarity=0.120 Sum_probs=29.5
Q ss_pred CCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 204 NVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 204 nI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+..+|.+||.++.+.|.++.+++.+ |.+.|+.++.
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~--~~~~v~~vD~ 82 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLL--GAESVTAFDI 82 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHT--TBSEEEEEES
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHc--CCCEEEEEEC
Confidence 5668999999999999999999887 4567888875
No 306
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=48.98 E-value=27 Score=33.55 Aligned_cols=45 Identities=11% Similarity=-0.066 Sum_probs=33.9
Q ss_pred hcCcceEEEeCCC------CChHHHHHhHHhcccCCCcEEEEeCChHHHHH
Q 012978 350 ENGFSSMIVVAPE------LDPWSFVKDLLPLLSYSAPFAIYHQYLQPLAT 394 (452)
Q Consensus 350 ~~~~D~liia~~~------~dP~~il~~ll~~L~pS~p~VVYsp~~epL~e 394 (452)
.+.||.++...-- .+...++..+...|+|+|.|++-.|..+.+..
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~ 177 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSK 177 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHTT
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHHH
Confidence 4689977653211 14578899999999999999999998877653
No 307
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=47.79 E-value=23 Score=34.64 Aligned_cols=43 Identities=19% Similarity=0.137 Sum_probs=34.6
Q ss_pred HHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecC
Q 012978 197 SLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIG 241 (452)
Q Consensus 197 a~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~ 241 (452)
..|+......+|.+||.++.+.|.++..++.+ |.++|+.++..
T Consensus 40 ~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~~vD~s 82 (348)
T 2y1w_A 40 RAILQNHTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAS 82 (348)
T ss_dssp HHHHHTGGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECS
T ss_pred HHHHhccccCCcCEEEEcCCCccHHHHHHHhC--CCCEEEEECCH
Confidence 34556667789999999999999999988886 45689988763
No 308
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=47.02 E-value=38 Score=34.28 Aligned_cols=33 Identities=18% Similarity=0.055 Sum_probs=28.0
Q ss_pred CCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 205 VAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 205 I~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+.+|.+||.+..+.|.++.+++.+ + ..|+.++.
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~-~--~~V~gvD~ 320 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR-G--FNVKGFDS 320 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT-T--CEEEEEES
T ss_pred cCCCCEEEEeeccchHHHHHHHHc-C--CEEEEEEC
Confidence 678999999999999999999886 2 47888875
No 309
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=46.78 E-value=25 Score=37.83 Aligned_cols=81 Identities=15% Similarity=0.100 Sum_probs=45.0
Q ss_pred ccCCcEE-EeCC---ChHHHHHHHHhcCcccccccchhHHHHHHHhc-CCC---CCCeEEEEeCCCcHHH---HHHHHHh
Q 012978 161 KYAPKVL-LRRP---FARSICEAYFKKNPARIGFLRVDMLSLLLSMG-NVA---ANSDVLVVDMAGGLLT---GAVAERL 229 (452)
Q Consensus 161 Ky~~~~~-i~~p---t~~~l~e~y~~Kdp~Ki~~lR~DtLa~iL~~a-nI~---~g~rvLv~d~~~Gllt---aAv~erm 229 (452)
-|..++| +|+| ++.+.+--.|+|||.|-.--+-=-...|.-+. .-+ .+..||++|.|.|.|+ ...+.+.
T Consensus 303 ~y~D~Lq~PLQPl~dnL~s~tYevFEkD~vKy~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~ 382 (637)
T 4gqb_A 303 GYEDYLQSPLQPLMDNLESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQA 382 (637)
T ss_dssp TCBTCCBEECCTTTSCCCHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHT
T ss_pred cccccccCcCcchhhhhhhhhhhhhcCChhhHHHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhc
Confidence 3555544 5666 57777777889999664222211111122111 111 2346888999999994 4444443
Q ss_pred CCCceEEEeecC
Q 012978 230 GGTGYVCNTCIG 241 (452)
Q Consensus 230 gg~G~v~~~~~~ 241 (452)
|..=+||.++..
T Consensus 383 ~~~vkVyAVEkn 394 (637)
T 4gqb_A 383 DRRIKLYAVEKN 394 (637)
T ss_dssp TCEEEEEEEESC
T ss_pred CCCcEEEEEECC
Confidence 333368888874
No 310
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=46.67 E-value=38 Score=32.94 Aligned_cols=53 Identities=11% Similarity=0.107 Sum_probs=37.2
Q ss_pred HHHHhcCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEeecCCCCCchhhhhhcC
Q 012978 198 LLLSMGNVAANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTCIGDSLYPMDIVRIFN 254 (452)
Q Consensus 198 ~iL~~anI~~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~~~~~~~~~~~~~~~n 254 (452)
+.|..+++++|.+|||.+.+. |++++.+|..+|. +|+..... +..++.++.++
T Consensus 170 ~~l~~~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga--~Vi~~~~~--~~~~~~~~~lG 223 (360)
T 1piw_A 170 SPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGA--ETYVISRS--SRKREDAMKMG 223 (360)
T ss_dssp HHHHHTTCSTTCEEEEECCSHHHHHHHHHHHHHTC--EEEEEESS--STTHHHHHHHT
T ss_pred HHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC--EEEEEcCC--HHHHHHHHHcC
Confidence 444568999999999999733 8889999998876 57766543 23444444444
No 311
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=45.96 E-value=34 Score=27.25 Aligned_cols=46 Identities=15% Similarity=0.083 Sum_probs=35.2
Q ss_pred hHHHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhccCccceeeee
Q 012978 365 PWSFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRKMAIGLQISE 412 (452)
Q Consensus 365 P~~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~~~v~l~l~E 412 (452)
|+.-+...+.-|.++.++|+||..-.--..+...|+.. +| ++...+
T Consensus 41 p~~~l~~~~~~l~~~~~ivvyC~~G~rs~~aa~~L~~~-G~-~v~~l~ 86 (108)
T 3gk5_A 41 PISELREKWKILERDKKYAVICAHGNRSAAAVEFLSQL-GL-NIVDVE 86 (108)
T ss_dssp CHHHHHHHGGGSCTTSCEEEECSSSHHHHHHHHHHHTT-TC-CEEEET
T ss_pred CHHHHHHHHHhCCCCCeEEEEcCCCcHHHHHHHHHHHc-CC-CEEEEc
Confidence 66667777777888999999998876667777778764 46 776654
No 312
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=45.28 E-value=35 Score=25.65 Aligned_cols=46 Identities=11% Similarity=0.042 Sum_probs=32.3
Q ss_pred hHHHHHhHHhcc--cCCCcEEEEeCChHHHHHHHHHHHhccCccceeee
Q 012978 365 PWSFVKDLLPLL--SYSAPFAIYHQYLQPLATCMHSLQVRKMAIGLQIS 411 (452)
Q Consensus 365 P~~il~~ll~~L--~pS~p~VVYsp~~epL~e~~~~L~~~~~~v~l~l~ 411 (452)
|+.-+...+..| .++.++|+||..-..-..+...|+.. +|-++.+.
T Consensus 25 p~~~l~~~~~~l~~~~~~~ivv~C~~g~rs~~aa~~L~~~-G~~~v~~l 72 (85)
T 2jtq_A 25 PLKEVKERIATAVPDKNDTVKVYCNAGRQSGQAKEILSEM-GYTHVENA 72 (85)
T ss_dssp CHHHHHHHHHHHCCCTTSEEEEEESSSHHHHHHHHHHHHT-TCSSEEEE
T ss_pred CHHHHHHHHHHhCCCCCCcEEEEcCCCchHHHHHHHHHHc-CCCCEEec
Confidence 555566666656 67899999999877667777888764 46555443
No 313
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=42.96 E-value=31 Score=34.30 Aligned_cols=47 Identities=6% Similarity=-0.036 Sum_probs=38.7
Q ss_pred hHHHHHHHhcCCCC------CCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecC
Q 012978 194 DMLSLLLSMGNVAA------NSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIG 241 (452)
Q Consensus 194 DtLa~iL~~anI~~------g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~ 241 (452)
..+-.|+..+++.+ +..||+++-|-|.||.+++++.++ .+|+.++..
T Consensus 39 ~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~-~~vvavE~D 91 (353)
T 1i4w_A 39 TVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCP-RQYSLLEKR 91 (353)
T ss_dssp HHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCC-SEEEEECCC
T ss_pred HHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCC-CEEEEEecC
Confidence 55678888888875 589999999999999999998654 378888763
No 314
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=40.87 E-value=1.2e+02 Score=25.32 Aligned_cols=41 Identities=10% Similarity=-0.057 Sum_probs=29.4
Q ss_pred hHHhcccCCCcEEEEeCChHHHHHHHHHHHhccCccceeeee
Q 012978 371 DLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRKMAIGLQISE 412 (452)
Q Consensus 371 ~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~~~v~l~l~E 412 (452)
.+...|.++.++|+||..-.--..+...|+.. +|-++.+.+
T Consensus 48 ~~~~~l~~~~~ivvyC~~g~rs~~aa~~L~~~-G~~~v~~l~ 88 (141)
T 3ilm_A 48 RASSSLEKSRDIYVYGAGDEQTSQAVNLLRSA-GFEHVSELK 88 (141)
T ss_dssp HHHTTSCTTSEEEEECSSHHHHHHHHHHHHHT-TCCSEEECT
T ss_pred HHHhcCCCCCeEEEEECCChHHHHHHHHHHHc-CCCCEEEec
Confidence 34467788899999999876667777777764 466665543
No 315
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=39.68 E-value=37 Score=30.94 Aligned_cols=33 Identities=12% Similarity=0.124 Sum_probs=27.8
Q ss_pred CCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 207 ANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 207 ~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
++.+||.++++.|.++.+++.+..+ +.|+.++.
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~-~~v~gvD~ 97 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNG-WYFLATEV 97 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHC-CEEEEEES
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCC-CeEEEEEC
Confidence 5789999999999999999988743 57888875
No 316
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=38.96 E-value=36 Score=26.88 Aligned_cols=45 Identities=4% Similarity=-0.119 Sum_probs=32.0
Q ss_pred hHHHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhccCccceee
Q 012978 365 PWSFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRKMAIGLQI 410 (452)
Q Consensus 365 P~~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~~~v~l~l 410 (452)
|+.-+...+..|.++.++|+||..-..-..+...|+.. +|-++..
T Consensus 44 p~~~l~~~~~~l~~~~~ivvyc~~g~rs~~a~~~L~~~-G~~~v~~ 88 (108)
T 1gmx_A 44 TNDTLGAFMRDNDFDTPVMVMCYHGNSSKGAAQYLLQQ-GYDVVYS 88 (108)
T ss_dssp CHHHHHHHHHHSCTTSCEEEECSSSSHHHHHHHHHHHH-TCSSEEE
T ss_pred CHHHHHHHHHhcCCCCCEEEEcCCCchHHHHHHHHHHc-CCceEEE
Confidence 44555555666788999999999876667777777764 4655544
No 317
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=38.87 E-value=75 Score=31.67 Aligned_cols=40 Identities=10% Similarity=0.091 Sum_probs=32.0
Q ss_pred cccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 012978 189 GFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (452)
Q Consensus 189 ~~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~er 228 (452)
.-||....+.|+.+++..+|..++-...++|-++...+.+
T Consensus 176 Apl~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~ 215 (384)
T 3ldg_A 176 APIKENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMI 215 (384)
T ss_dssp CCCCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHH
Confidence 3477787888999999999999998888888776555543
No 318
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=38.68 E-value=18 Score=35.46 Aligned_cols=41 Identities=20% Similarity=0.163 Sum_probs=33.1
Q ss_pred HHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecC
Q 012978 199 LLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIG 241 (452)
Q Consensus 199 iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~ 241 (452)
|+....+.+|.+||.++.+.|.++.+++.+ |.++|+.++..
T Consensus 58 i~~~~~~~~~~~VLDvGcG~G~~~~~la~~--g~~~v~gvD~s 98 (349)
T 3q7e_A 58 MFHNRHLFKDKVVLDVGSGTGILCMFAAKA--GARKVIGIECS 98 (349)
T ss_dssp HHTCHHHHTTCEEEEESCTTSHHHHHHHHT--TCSEEEEEECS
T ss_pred HHhccccCCCCEEEEEeccchHHHHHHHHC--CCCEEEEECcH
Confidence 333345678999999999999999999987 56789988764
No 319
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=38.44 E-value=22 Score=34.42 Aligned_cols=39 Identities=21% Similarity=0.198 Sum_probs=31.2
Q ss_pred HhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecC
Q 012978 201 SMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIG 241 (452)
Q Consensus 201 ~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~ 241 (452)
....+.+|.+||.++.+.|.++..++++ |.++|+.++..
T Consensus 32 ~~~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~~vD~s 70 (328)
T 1g6q_1 32 QNKDLFKDKIVLDVGCGTGILSMFAAKH--GAKHVIGVDMS 70 (328)
T ss_dssp HHHHHHTTCEEEEETCTTSHHHHHHHHT--CCSEEEEEESS
T ss_pred hhHhhcCCCEEEEecCccHHHHHHHHHC--CCCEEEEEChH
Confidence 3445668999999999999999988886 45688888763
No 320
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=38.00 E-value=25 Score=27.51 Aligned_cols=45 Identities=13% Similarity=0.056 Sum_probs=31.8
Q ss_pred hHHHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhccCccceeee
Q 012978 365 PWSFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRKMAIGLQIS 411 (452)
Q Consensus 365 P~~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~~~v~l~l~ 411 (452)
|+.-+...+.-|.++.++|+||..-.--..+...|+.. +| ++...
T Consensus 42 p~~~l~~~~~~l~~~~~ivvyC~~g~rs~~a~~~L~~~-G~-~v~~l 86 (100)
T 3foj_A 42 PMNSIPDNLNYFNDNETYYIICKAGGRSAQVVQYLEQN-GV-NAVNV 86 (100)
T ss_dssp CGGGGGGCGGGSCTTSEEEEECSSSHHHHHHHHHHHTT-TC-EEEEE
T ss_pred CHHHHHHHHHhCCCCCcEEEEcCCCchHHHHHHHHHHC-CC-CEEEe
Confidence 44555566667788999999998876666777777764 46 65543
No 321
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=37.35 E-value=2.2e+02 Score=27.62 Aligned_cols=41 Identities=17% Similarity=0.037 Sum_probs=30.3
Q ss_pred HHHHHhcC-CCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEe
Q 012978 197 SLLLSMGN-VAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNT 238 (452)
Q Consensus 197 a~iL~~an-I~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~ 238 (452)
..++.... ..++.+||.++.+.|.++.+++++..+ .+++.+
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~ 231 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPT-IKGVNF 231 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEE
T ss_pred HHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCC-CeEEEe
Confidence 34555444 778899999999999999999998733 344443
No 322
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=37.03 E-value=75 Score=31.55 Aligned_cols=41 Identities=12% Similarity=-0.039 Sum_probs=33.0
Q ss_pred cccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHh
Q 012978 189 GFLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERL 229 (452)
Q Consensus 189 ~~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~erm 229 (452)
.-||....+.|+.+++..+|.++|-...++|-++..++.+.
T Consensus 177 Apl~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~ 217 (385)
T 3ldu_A 177 APIRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIG 217 (385)
T ss_dssp CCCCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHH
Confidence 34677777889999999999999999998997766666553
No 323
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=36.42 E-value=84 Score=24.85 Aligned_cols=45 Identities=11% Similarity=0.116 Sum_probs=34.3
Q ss_pred HHHHHHhhhcCcceEEEeCCCCChHHHHHhHHhcccC-CCcEEEEeCChH
Q 012978 342 QETLKLWKENGFSSMIVVAPELDPWSFVKDLLPLLSY-SAPFAIYHQYLQ 390 (452)
Q Consensus 342 ~~~~~~~~~~~~D~liia~~~~dP~~il~~ll~~L~p-S~p~VVYsp~~e 390 (452)
.++++.+....+|.+| .+..+-++++..+... + ..|+++++.+..
T Consensus 52 ~~al~~l~~~~~dlvi--~~~~~g~~~~~~l~~~--~~~~~ii~ls~~~~ 97 (137)
T 2pln_A 52 EDGEYLMDIRNYDLVM--VSDKNALSFVSRIKEK--HSSIVVLVSSDNPT 97 (137)
T ss_dssp HHHHHHHHHSCCSEEE--ECSTTHHHHHHHHHHH--STTSEEEEEESSCC
T ss_pred HHHHHHHHcCCCCEEE--EcCccHHHHHHHHHhc--CCCccEEEEeCCCC
Confidence 3455566677899666 5567788888888877 7 899999998764
No 324
>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation, nucleotide-binding, hydrolase, RNA-binding, ATP-binding, DNA-binding, nuclear protein; 1.91A {Homo sapiens}
Probab=36.25 E-value=62 Score=28.27 Aligned_cols=50 Identities=18% Similarity=0.134 Sum_probs=33.6
Q ss_pred cceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhc
Q 012978 353 FSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVR 402 (452)
Q Consensus 353 ~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~ 402 (452)
..-.++.++..+-...|..++....++++++|||++...+..++..|+..
T Consensus 20 i~q~~~~v~~~~K~~~L~~ll~~~~~~~k~lVF~~~~~~~~~l~~~L~~~ 69 (185)
T 2jgn_A 20 ITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHE 69 (185)
T ss_dssp EEEEEEECCGGGHHHHHHHHHHHC-CCSCEEEEESCHHHHHHHHHHHHHT
T ss_pred ceEEEEEeCcHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHHc
Confidence 34445555433345556666666667788999999999988888888754
No 325
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=34.94 E-value=35 Score=32.17 Aligned_cols=42 Identities=19% Similarity=0.096 Sum_probs=35.1
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecC
Q 012978 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIG 241 (452)
Q Consensus 196 La~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~ 241 (452)
|..|+....+.+|.+||-++.+.|.++..++++ |.|+.+...
T Consensus 63 L~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s 104 (265)
T 2oxt_A 63 LAWMEERGYVELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAY 104 (265)
T ss_dssp HHHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEE
T ss_pred HHHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECc
Confidence 566666667889999999999999999988887 789988763
No 326
>2kw0_A CCMH protein; oxidoreductase, cytochrome C maturation; NMR {Escherichia coli}
Probab=34.87 E-value=18 Score=28.93 Aligned_cols=40 Identities=28% Similarity=0.428 Sum_probs=31.6
Q ss_pred ccCccccccCccc--ccCCHHHHHHHHHcCCChHHHHHHHHhc
Q 012978 99 FRDNRAIVDDNKA--QCLSGEDIDEMRRQGATGEEIVEALIAN 139 (452)
Q Consensus 99 ~~dNr~i~Dd~~~--QkLs~eeI~~lK~~g~sG~eII~~Lven 139 (452)
.+-|++|.|.|+. +.| ..+|-+|-++|.|-+||++-+++.
T Consensus 28 vCqnqsI~dSnA~iA~dl-R~~Vre~l~~G~Sd~eI~~~mv~R 69 (90)
T 2kw0_A 28 KCQNNSIADSNSMIATDL-RQKVYELMQEGKSKKEIVDYMVAR 69 (90)
T ss_dssp CTTSCTTTSCCCHHHHHH-HHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred CCCCCchhhcCcHHHHHH-HHHHHHHHHcCCCHHHHHHHHHHh
Confidence 4578899888773 333 456888889999999999999984
No 327
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=34.29 E-value=79 Score=31.56 Aligned_cols=39 Identities=10% Similarity=0.009 Sum_probs=32.0
Q ss_pred ccchhHHHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHH
Q 012978 190 FLRVDMLSLLLSMGNVAANSDVLVVDMAGGLLTGAVAER 228 (452)
Q Consensus 190 ~lR~DtLa~iL~~anI~~g~rvLv~d~~~GlltaAv~er 228 (452)
-||....+.|+.+++..+|..+|-...++|-++...+.+
T Consensus 184 pl~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~ 222 (393)
T 3k0b_A 184 PIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALI 222 (393)
T ss_dssp SCCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHH
T ss_pred CCcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHH
Confidence 477777888999999999999999988888776555554
No 328
>2hl7_A Cytochrome C-type biogenesis protein CCMH; three-helices bundle, oxidoreductase; HET: PG4; 1.70A {Pseudomonas aeruginosa}
Probab=34.19 E-value=19 Score=28.38 Aligned_cols=40 Identities=30% Similarity=0.365 Sum_probs=31.6
Q ss_pred ccCccccccCccc--ccCCHHHHHHHHHcCCChHHHHHHHHhc
Q 012978 99 FRDNRAIVDDNKA--QCLSGEDIDEMRRQGATGEEIVEALIAN 139 (452)
Q Consensus 99 ~~dNr~i~Dd~~~--QkLs~eeI~~lK~~g~sG~eII~~Lven 139 (452)
.+-|++|.|.|+. +.| ..+|-+|-++|.|-+||++-+++.
T Consensus 31 ~Cqnqsi~dSna~iA~dl-R~~V~~~l~~G~sd~eI~~~~v~R 72 (84)
T 2hl7_A 31 KCQNQDIADSNAPIAADL-RKQIYGQLQQGKSDGEIVDYMVAR 72 (84)
T ss_dssp TSSSCBTTTCCSHHHHHH-HHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred CCCCCchhhcCcHHHHHH-HHHHHHHHHcCCCHHHHHHHHHHh
Confidence 4578899888763 333 456888999999999999999984
No 329
>3lup_A DEGV family protein; PSI-2, MCSG, structural genomics, fatty acid binding, protei structure initiative; HET: ELA; 2.65A {Streptococcus agalactiae} SCOP: c.119.1.0
Probab=32.64 E-value=84 Score=29.97 Aligned_cols=86 Identities=14% Similarity=0.079 Sum_probs=56.3
Q ss_pred ccccCcc---cccCCHHHHHHHHHcCCChHHHHHHHHhccccccccccccHHHHHHHhhhccCCcEEEeCCChHHHHHHH
Q 012978 104 AIVDDNK---AQCLSGEDIDEMRRQGATGEEIVEALIANSATFEKKTSFSQEKYKLKKQKKYAPKVLLRRPFARSICEAY 180 (452)
Q Consensus 104 ~i~Dd~~---~QkLs~eeI~~lK~~g~sG~eII~~LvenS~tF~~KT~FSqeKYlkkK~kKy~~~~~i~~pt~~~l~e~y 180 (452)
.++|... .|.+--.+..+|.++|.+-+||++.|-+.. .+ .++...-.|+. |
T Consensus 116 ~ViDS~~~s~g~g~~v~~A~~l~~~G~s~eeI~~~l~~~~-------------------~~--~~~~f~v~~L~-----~ 169 (285)
T 3lup_A 116 AFPDTKITSAPQGNLVRNALMCSREGMDFDVIVNKIQSQI-------------------EK--IEGFIVVNDLN-----H 169 (285)
T ss_dssp ECCCCCCCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHH-------------------TT--CEEEEECSCTH-----H
T ss_pred EEEcCCchHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH-------------------hh--cEEEEEECChH-----H
Confidence 3578754 388999999999999999999999886631 11 11222234444 2
Q ss_pred HhcCcccccccchhHHHHHHHhcCCCC------CCeEEEEeCCCcH
Q 012978 181 FKKNPARIGFLRVDMLSLLLSMGNVAA------NSDVLVVDMAGGL 220 (452)
Q Consensus 181 ~~Kdp~Ki~~lR~DtLa~iL~~anI~~------g~rvLv~d~~~Gl 220 (452)
..|. +.|. -+-|.+-++.||+| +|++.+++-+-|.
T Consensus 170 L~kG----GRis-~~~a~ig~lL~IKPIl~~~~~G~l~~~~KvRg~ 210 (285)
T 3lup_A 170 LVKG----GRLS-NGSAIIGNLLSIKPVLHFNEEGKIVVYEKVRTE 210 (285)
T ss_dssp HHHH----TCBT-THHHHHHHHTTSCCEEEECTTSCEEEEECCSSH
T ss_pred HhhC----CCcc-HHHHHHHHhhCcEEEEEEccCceEEEeeecCCH
Confidence 2221 1221 14577888889987 5788888887776
No 330
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=32.51 E-value=1.1e+02 Score=29.29 Aligned_cols=35 Identities=9% Similarity=-0.083 Sum_probs=27.5
Q ss_pred CCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEee
Q 012978 204 NVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTC 239 (452)
Q Consensus 204 nI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~ 239 (452)
+..++.+||.++.+.|.++.+++++..+ .+++.+.
T Consensus 185 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D 219 (352)
T 1fp2_A 185 VFDGLESIVDVGGGTGTTAKIICETFPK-LKCIVFD 219 (352)
T ss_dssp HHTTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEE
T ss_pred ccccCceEEEeCCCccHHHHHHHHHCCC-CeEEEee
Confidence 4567899999999999999999998633 3555554
No 331
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=32.31 E-value=56 Score=31.74 Aligned_cols=36 Identities=14% Similarity=0.191 Sum_probs=29.2
Q ss_pred cCCCCCCeEEEEeCCC-cHHHHHHHHHh-CCCceEEEeec
Q 012978 203 GNVAANSDVLVVDMAG-GLLTGAVAERL-GGTGYVCNTCI 240 (452)
Q Consensus 203 anI~~g~rvLv~d~~~-GlltaAv~erm-gg~G~v~~~~~ 240 (452)
+++++|.+|||.+.+. |+++..+|..+ |. +|+....
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga--~Vi~~~~ 219 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTPA--TVIALDV 219 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCCC--EEEEEES
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCC--eEEEEeC
Confidence 8999999999998733 88888899888 54 6776654
No 332
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=32.09 E-value=71 Score=30.95 Aligned_cols=41 Identities=17% Similarity=0.129 Sum_probs=31.1
Q ss_pred HHHHhcCCC-CCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEeec
Q 012978 198 LLLSMGNVA-ANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 198 ~iL~~anI~-~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~~ 240 (452)
+.|..+++. +|.+|||.+.+. |++++.+|..+|. +|+.+..
T Consensus 170 ~~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga--~Vi~~~~ 212 (357)
T 2cf5_A 170 SPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGH--HVTVISS 212 (357)
T ss_dssp HHHHHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTC--EEEEEES
T ss_pred HHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC--eEEEEeC
Confidence 345567898 999999998633 8888889988875 6766654
No 333
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=31.91 E-value=78 Score=24.72 Aligned_cols=48 Identities=13% Similarity=0.135 Sum_probs=33.3
Q ss_pred HHHHHhhhcCcceEEEeC--CCCChHHHHHhHHhcccCCCcEEEEeCChHH
Q 012978 343 ETLKLWKENGFSSMIVVA--PELDPWSFVKDLLPLLSYSAPFAIYHQYLQP 391 (452)
Q Consensus 343 ~~~~~~~~~~~D~liia~--~~~dP~~il~~ll~~L~pS~p~VVYsp~~ep 391 (452)
++++.+.+..+|.+|++. +..+.++++..+.. ..|..|+++++.+.++
T Consensus 42 ~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~-~~~~~~ii~~t~~~~~ 91 (130)
T 3eod_A 42 DALELLGGFTPDLMICDIAMPRMNGLKLLEHIRN-RGDQTPVLVISATENM 91 (130)
T ss_dssp HHHHHHTTCCCSEEEECCC-----CHHHHHHHHH-TTCCCCEEEEECCCCH
T ss_pred HHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHh-cCCCCCEEEEEcCCCH
Confidence 455666777899888886 22355777777765 4577899999988765
No 334
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=31.39 E-value=55 Score=31.11 Aligned_cols=39 Identities=26% Similarity=0.244 Sum_probs=30.4
Q ss_pred HHHhcCCCCCCeEEEEe-C-CCcHHHHHHHHHhCCCceEEEee
Q 012978 199 LLSMGNVAANSDVLVVD-M-AGGLLTGAVAERLGGTGYVCNTC 239 (452)
Q Consensus 199 iL~~anI~~g~rvLv~d-~-~~GlltaAv~ermgg~G~v~~~~ 239 (452)
.|..+++++|.+|||.+ . +-|+++..+|..+|- +|+...
T Consensus 144 al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga--~vi~~~ 184 (321)
T 3tqh_A 144 ALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT--TVITTA 184 (321)
T ss_dssp HHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEE
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC--EEEEEe
Confidence 34678999999999997 4 338999999998876 566553
No 335
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=30.99 E-value=1.1e+02 Score=24.09 Aligned_cols=50 Identities=14% Similarity=0.176 Sum_probs=36.6
Q ss_pred HHHHHHhhhcCcceEEEeC--CCCChHHHHHhHHhc-ccCCCcEEEEeCChHH
Q 012978 342 QETLKLWKENGFSSMIVVA--PELDPWSFVKDLLPL-LSYSAPFAIYHQYLQP 391 (452)
Q Consensus 342 ~~~~~~~~~~~~D~liia~--~~~dP~~il~~ll~~-L~pS~p~VVYsp~~ep 391 (452)
.++++.+.+..+|.+|++. +..+-++++..+... ..+..|+++++.+..+
T Consensus 40 ~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~ 92 (140)
T 3grc_A 40 AQALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANARE 92 (140)
T ss_dssp HHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTHHH
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCCCh
Confidence 3556667778899999885 234567888877763 4578899999998765
No 336
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=30.89 E-value=33 Score=26.87 Aligned_cols=45 Identities=13% Similarity=-0.008 Sum_probs=30.9
Q ss_pred hHHHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhccCccceeee
Q 012978 365 PWSFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRKMAIGLQIS 411 (452)
Q Consensus 365 P~~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~~~v~l~l~ 411 (452)
|+.-+...+..|.+..++|+||..-.--..+...|+.. +| ++...
T Consensus 42 p~~~l~~~~~~l~~~~~iv~yC~~g~rs~~a~~~L~~~-G~-~v~~l 86 (103)
T 3eme_A 42 PMDTIPDNLNSFNKNEIYYIVCAGGVRSAKVVEYLEAN-GI-DAVNV 86 (103)
T ss_dssp CGGGGGGCGGGCCTTSEEEEECSSSSHHHHHHHHHHTT-TC-EEEEE
T ss_pred CHHHHHHHHHhCCCCCeEEEECCCChHHHHHHHHHHHC-CC-CeEEe
Confidence 34445555666778899999999876666777777764 45 65543
No 337
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=30.69 E-value=42 Score=32.91 Aligned_cols=47 Identities=15% Similarity=0.054 Sum_probs=36.4
Q ss_pred chhHHHHHHHhcCCCCCCeEEEEeCCCcHHHH---HHHHHhCCCceEEEee
Q 012978 192 RVDMLSLLLSMGNVAANSDVLVVDMAGGLLTG---AVAERLGGTGYVCNTC 239 (452)
Q Consensus 192 R~DtLa~iL~~anI~~g~rvLv~d~~~Gllta---Av~ermgg~G~v~~~~ 239 (452)
..+.++..|...+|..+..|+|||+.+|.-++ .++..+|- -.|..+.
T Consensus 97 ~~~~f~~~l~~lGI~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh-~~V~vLd 146 (327)
T 3utn_X 97 TKKVFDDAMSNLGVQKDDILVVYDRVGNFSSPRCAWTLGVMGH-PKVYLLN 146 (327)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECSSSSSSHHHHHHHHHHTTC-SEEEEES
T ss_pred CHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHHcCC-Cceeecc
Confidence 46799999999999999999999998776544 45555554 4676664
No 338
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=29.04 E-value=1.1e+02 Score=24.10 Aligned_cols=47 Identities=13% Similarity=-0.002 Sum_probs=34.4
Q ss_pred HHHHHhhhcCcceEEEeCC---CCChHHHHHhHHhcccCCCcEEEEeCChHH
Q 012978 343 ETLKLWKENGFSSMIVVAP---ELDPWSFVKDLLPLLSYSAPFAIYHQYLQP 391 (452)
Q Consensus 343 ~~~~~~~~~~~D~liia~~---~~dP~~il~~ll~~L~pS~p~VVYsp~~ep 391 (452)
++++.+....+|.+|++.. ..+.++++..+... +..|+++++...+.
T Consensus 45 ~a~~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~--~~~~ii~ls~~~~~ 94 (140)
T 3cg0_A 45 EAVRCAPDLRPDIALVDIMLCGALDGVETAARLAAG--CNLPIIFITSSQDV 94 (140)
T ss_dssp HHHHHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHH--SCCCEEEEECCCCH
T ss_pred HHHHHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhC--CCCCEEEEecCCCH
Confidence 4455666678999999862 23457778877776 88999999987654
No 339
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=28.96 E-value=1.1e+02 Score=24.79 Aligned_cols=49 Identities=12% Similarity=0.105 Sum_probs=35.0
Q ss_pred HHHHHHhhhcCcceEEEeC--CCCChHHHHHhHHhcccCCCcEEEEeCChHH
Q 012978 342 QETLKLWKENGFSSMIVVA--PELDPWSFVKDLLPLLSYSAPFAIYHQYLQP 391 (452)
Q Consensus 342 ~~~~~~~~~~~~D~liia~--~~~dP~~il~~ll~~L~pS~p~VVYsp~~ep 391 (452)
.++++.+.+..+|.+|++. +..+..+++..+... .|..|+++++...++
T Consensus 51 ~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~-~~~~~ii~~s~~~~~ 101 (152)
T 3eul_A 51 AAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSY-ELPTRVLLISAHDEP 101 (152)
T ss_dssp HHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHT-TCSCEEEEEESCCCH
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhc-CCCCeEEEEEccCCH
Confidence 3455666677899999986 234557777777654 577899999987664
No 340
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=28.39 E-value=45 Score=32.06 Aligned_cols=53 Identities=9% Similarity=0.024 Sum_probs=34.9
Q ss_pred hhhcCcceEEEeCCCCChHHHHHhHHhcccCCCcEEE---EeCChHHHHHHHHHHHhcc
Q 012978 348 WKENGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAI---YHQYLQPLATCMHSLQVRK 403 (452)
Q Consensus 348 ~~~~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VV---Ysp~~epL~e~~~~L~~~~ 403 (452)
+...++|.++|++| |..-.+.+...|.-+.++++ .+...+...++....++.+
T Consensus 63 l~~~~~D~V~i~tp---~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g 118 (330)
T 3e9m_A 63 CKDETIDIIYIPTY---NQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQG 118 (330)
T ss_dssp HHCTTCSEEEECCC---GGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTT
T ss_pred hcCCCCCEEEEcCC---CHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Confidence 33457899999886 44556666777777777766 3445566666666666543
No 341
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=28.37 E-value=54 Score=26.87 Aligned_cols=45 Identities=11% Similarity=-0.032 Sum_probs=31.8
Q ss_pred HHHHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhccCccceeee
Q 012978 366 WSFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVRKMAIGLQIS 411 (452)
Q Consensus 366 ~~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~~~~v~l~l~ 411 (452)
.+.+..+...|.++.++|+||..-.--..+...|+.. +|-++...
T Consensus 69 ~~~~~~~~~~l~~~~~ivvyC~~G~rs~~aa~~L~~~-G~~~v~~l 113 (129)
T 1tq1_A 69 TDFLEQVSSHFGQSDNIIVGCQSGGRSIKATTDLLHA-GFTGVKDI 113 (129)
T ss_dssp TTHHHHHTTTCCTTSSEEEEESSCSHHHHHHHHHHHH-HCCSEEEE
T ss_pred HHHHHHHHhhCCCCCeEEEECCCCcHHHHHHHHHHHc-CCCCeEEe
Confidence 3566666677788999999999866666677777754 46555543
No 342
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=28.31 E-value=1.1e+02 Score=24.09 Aligned_cols=49 Identities=6% Similarity=0.122 Sum_probs=34.5
Q ss_pred HHHHHHhhhcCcceEEEeCC-------CCChHHHHHhHHhcccCCCcEEEEeCChHH
Q 012978 342 QETLKLWKENGFSSMIVVAP-------ELDPWSFVKDLLPLLSYSAPFAIYHQYLQP 391 (452)
Q Consensus 342 ~~~~~~~~~~~~D~liia~~-------~~dP~~il~~ll~~L~pS~p~VVYsp~~ep 391 (452)
.++++.+.+..+|.+|++.. ..+.+.++..+... .+..|+++++...++
T Consensus 37 ~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~-~~~~~ii~ls~~~~~ 92 (140)
T 2qr3_A 37 VSLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQ-YRDLPVVLFTAYADI 92 (140)
T ss_dssp HHHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHH-CTTCCEEEEEEGGGH
T ss_pred HHHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhh-CcCCCEEEEECCCCH
Confidence 34556666778999999863 22456777777664 578899999987653
No 343
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=28.09 E-value=39 Score=32.04 Aligned_cols=51 Identities=4% Similarity=-0.011 Sum_probs=34.8
Q ss_pred CcceEEEeCCCCChHHHHHhHHhcccCCCcEEEE---eCChHHHHHHHHHHHhccCc
Q 012978 352 GFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIY---HQYLQPLATCMHSLQVRKMA 405 (452)
Q Consensus 352 ~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVY---sp~~epL~e~~~~L~~~~~~ 405 (452)
+.|.++|++| |..-.+.+..+|+-+.++++= +...+...++....++.+..
T Consensus 66 ~~D~V~i~tp---~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~~ 119 (308)
T 3uuw_A 66 KCDCIFLHSS---TETHYEIIKILLNLGVHVYVDKPLASTVSQGEELIELSTKKNLN 119 (308)
T ss_dssp TCSEEEECCC---GGGHHHHHHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHHTCC
T ss_pred cCCEEEEeCC---cHhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCCE
Confidence 8999999986 555667777778888776553 33556666666666665433
No 344
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=27.49 E-value=1.5e+02 Score=23.48 Aligned_cols=51 Identities=10% Similarity=0.178 Sum_probs=32.8
Q ss_pred HHHHHhhhcCcceEEEeCC--CCChHHHHHhHHhcccCCCcEEEEeCChHHHHH
Q 012978 343 ETLKLWKENGFSSMIVVAP--ELDPWSFVKDLLPLLSYSAPFAIYHQYLQPLAT 394 (452)
Q Consensus 343 ~~~~~~~~~~~D~liia~~--~~dP~~il~~ll~~L~pS~p~VVYsp~~epL~e 394 (452)
++++.+....+|.+|++.. ..+-.+++..+.. ..+..|+++.+.+.+...+
T Consensus 46 ~al~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~-~~~~~~ii~~s~~~~~~~~ 98 (143)
T 2qv0_A 46 DVLKFLQHNKVDAIFLDINIPSLDGVLLAQNISQ-FAHKPFIVFITAWKEHAVE 98 (143)
T ss_dssp HHHHHHHHCCCSEEEECSSCSSSCHHHHHHHHTT-STTCCEEEEEESCCTTHHH
T ss_pred HHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHc-cCCCceEEEEeCCHHHHHH
Confidence 4455666678998888862 2344666766655 3466678888887554333
No 345
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=27.36 E-value=1.5e+02 Score=23.46 Aligned_cols=50 Identities=8% Similarity=0.121 Sum_probs=34.2
Q ss_pred HHHHHHhhhcCcceEEEeCC--CCChHHHHHhHHhc-ccCCCcEEEEeCChHH
Q 012978 342 QETLKLWKENGFSSMIVVAP--ELDPWSFVKDLLPL-LSYSAPFAIYHQYLQP 391 (452)
Q Consensus 342 ~~~~~~~~~~~~D~liia~~--~~dP~~il~~ll~~-L~pS~p~VVYsp~~ep 391 (452)
.++++.+....+|.+|++.. ..+.++++..+... ..+..|+++++....+
T Consensus 41 ~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~ 93 (144)
T 3kht_A 41 AKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDNVSD 93 (144)
T ss_dssp HHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETTCCH
T ss_pred HHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCCCCH
Confidence 35566677788998888862 23446677776653 4577899999987544
No 346
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=26.99 E-value=39 Score=32.87 Aligned_cols=53 Identities=8% Similarity=-0.053 Sum_probs=34.6
Q ss_pred hhhcCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEE---eCChHHHHHHHHHHHhcc
Q 012978 348 WKENGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIY---HQYLQPLATCMHSLQVRK 403 (452)
Q Consensus 348 ~~~~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVY---sp~~epL~e~~~~L~~~~ 403 (452)
+...++|.++|++| |..-.+.+..+|.-+.++++= +...+...++....++.+
T Consensus 85 l~~~~~D~V~i~tp---~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g 140 (350)
T 3rc1_A 85 LERDDVDAVYVPLP---AVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERG 140 (350)
T ss_dssp HTCTTCSEEEECCC---GGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTT
T ss_pred hcCCCCCEEEECCC---cHHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 33457899999886 445566667777777776653 336666666666666544
No 347
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=26.79 E-value=1.3e+02 Score=24.00 Aligned_cols=49 Identities=12% Similarity=0.054 Sum_probs=34.4
Q ss_pred HHHHHhhhcCcceEEEeCC--CCChHHHHHhHHhc-ccCCCcEEEEeCChHH
Q 012978 343 ETLKLWKENGFSSMIVVAP--ELDPWSFVKDLLPL-LSYSAPFAIYHQYLQP 391 (452)
Q Consensus 343 ~~~~~~~~~~~D~liia~~--~~dP~~il~~ll~~-L~pS~p~VVYsp~~ep 391 (452)
++++.+....+|.+|++.. ..+-++++..+... ..+..|+++++.....
T Consensus 43 ~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~ls~~~~~ 94 (147)
T 2zay_A 43 EAVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIALSGRATA 94 (147)
T ss_dssp HHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEEEESSCCH
T ss_pred HHHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCEEEEeCCCCH
Confidence 4455566678999999862 23556777777763 4577899999987653
No 348
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=26.78 E-value=1.4e+02 Score=23.40 Aligned_cols=49 Identities=8% Similarity=0.007 Sum_probs=34.7
Q ss_pred HHHHHhhhcCcceEEEeCC--CCChHHHHHhHHhc-ccCCCcEEEEeCChHH
Q 012978 343 ETLKLWKENGFSSMIVVAP--ELDPWSFVKDLLPL-LSYSAPFAIYHQYLQP 391 (452)
Q Consensus 343 ~~~~~~~~~~~D~liia~~--~~dP~~il~~ll~~-L~pS~p~VVYsp~~ep 391 (452)
++++.+....+|.+|++.. ..+.++++..+... ..+..|+++++.....
T Consensus 45 ~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~ 96 (143)
T 3cnb_A 45 DAGDLLHTVKPDVVMLDLMMVGMDGFSICHRIKSTPATANIIVIAMTGALTD 96 (143)
T ss_dssp HHHHHHHHTCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSEEEEEESSCCH
T ss_pred HHHHHHHhcCCCEEEEecccCCCcHHHHHHHHHhCccccCCcEEEEeCCCCH
Confidence 4455666778999999862 23557777777664 4577899999987654
No 349
>1q5x_A Regulator of RNAse E activity A; 3-layer sandwich, alpha-beta structure, parallel beta sheet, antiparallel beta sheet, hydrolase inhibitor; 2.00A {Escherichia coli} SCOP: c.8.7.1
Probab=26.74 E-value=1.4e+02 Score=25.99 Aligned_cols=49 Identities=20% Similarity=0.192 Sum_probs=34.6
Q ss_pred CCCCCCeEEEEeCCC-------cHHHHHHHHHhCCCceEEEeecCCCCCchhhhhhcCCC
Q 012978 204 NVAANSDVLVVDMAG-------GLLTGAVAERLGGTGYVCNTCIGDSLYPMDIVRIFNFS 256 (452)
Q Consensus 204 nI~~g~rvLv~d~~~-------GlltaAv~ermgg~G~v~~~~~~~~~~~~~~~~~~nf~ 256 (452)
+--+-+.|||+|.++ |=+.++.+.+.|-.|.|+.-..+|. +.+..|+||
T Consensus 53 ~~~~~G~VlVvd~~g~~~~a~~G~~la~~a~~~G~~G~VidG~vRD~----~~i~~~~~p 108 (161)
T 1q5x_A 53 EQNGRGRVLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQV----DDLEELDIG 108 (161)
T ss_dssp TSCCTTEEEEEECTTCSSSEEECHHHHHHHHHTTCCEEEEEEEECCH----HHHTTSSSE
T ss_pred hhcCCCCEEEEECCCCCCceeehHHHHHHHHHCCCeEEEecCccCCH----HHHhcCCCc
Confidence 344567899998642 5566677778899999998877753 455566665
No 350
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=26.70 E-value=2.4e+02 Score=22.71 Aligned_cols=50 Identities=16% Similarity=0.232 Sum_probs=34.6
Q ss_pred HHHHHHhhhcCcceEEEeC--CCCChHHHHHhHHhcc-cCCCcEEEEeCChHH
Q 012978 342 QETLKLWKENGFSSMIVVA--PELDPWSFVKDLLPLL-SYSAPFAIYHQYLQP 391 (452)
Q Consensus 342 ~~~~~~~~~~~~D~liia~--~~~dP~~il~~ll~~L-~pS~p~VVYsp~~ep 391 (452)
.++++.+.+..+|.+|++. |..+.++++..+...- .+.-|+++++.+..+
T Consensus 41 ~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~ 93 (154)
T 3gt7_A 41 REAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILSDP 93 (154)
T ss_dssp HHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCCSH
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCCCh
Confidence 3455666777899999986 2345677777776543 267789999876543
No 351
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=26.45 E-value=1.3e+02 Score=37.68 Aligned_cols=37 Identities=27% Similarity=0.283 Sum_probs=27.3
Q ss_pred HhcCCCCCCeEEEEeCCC--cHHHHHHHHHhCCCceEEEee
Q 012978 201 SMGNVAANSDVLVVDMAG--GLLTGAVAERLGGTGYVCNTC 239 (452)
Q Consensus 201 ~~anI~~g~rvLv~d~~~--GlltaAv~ermgg~G~v~~~~ 239 (452)
..+++++|.+|||.+.++ |+.+..+|..+|. +|+...
T Consensus 1661 ~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga--~Viat~ 1699 (2512)
T 2vz8_A 1661 VRGRMQPGESVLIHSGSGGVGQAAIAIALSRGC--RVFTTV 1699 (2512)
T ss_dssp TTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEE
T ss_pred HHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCC--EEEEEe
Confidence 357899999999997655 6666677888775 566543
No 352
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=26.19 E-value=1.2e+02 Score=24.53 Aligned_cols=49 Identities=14% Similarity=0.130 Sum_probs=35.9
Q ss_pred HHHHHHhhhcCcceEEEeC--CCCChHHHHHhHHhcccCCCcEEEEeCChHH
Q 012978 342 QETLKLWKENGFSSMIVVA--PELDPWSFVKDLLPLLSYSAPFAIYHQYLQP 391 (452)
Q Consensus 342 ~~~~~~~~~~~~D~liia~--~~~dP~~il~~ll~~L~pS~p~VVYsp~~ep 391 (452)
.++++.+.+..+|.+|++. +..+.++++..+.. ..+..|+++++.+.+.
T Consensus 48 ~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~-~~~~~~ii~~s~~~~~ 98 (153)
T 3hv2_A 48 TQALQLLASREVDLVISAAHLPQMDGPTLLARIHQ-QYPSTTRILLTGDPDL 98 (153)
T ss_dssp HHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHH-HCTTSEEEEECCCCCH
T ss_pred HHHHHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHh-HCCCCeEEEEECCCCH
Confidence 3555667778899999986 23456778877766 5578899999987654
No 353
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=26.19 E-value=1.6e+02 Score=22.48 Aligned_cols=47 Identities=2% Similarity=0.016 Sum_probs=33.0
Q ss_pred HHHHHhhhcCcceEEEeCC--CCChHHHHHhHHhcccCCCcEEEEeCChHH
Q 012978 343 ETLKLWKENGFSSMIVVAP--ELDPWSFVKDLLPLLSYSAPFAIYHQYLQP 391 (452)
Q Consensus 343 ~~~~~~~~~~~D~liia~~--~~dP~~il~~ll~~L~pS~p~VVYsp~~ep 391 (452)
++.+.+....+|.+|++.. ..+-.+++..+.. .+..|+++.+.+.+.
T Consensus 37 ~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~--~~~~~ii~~s~~~~~ 85 (122)
T 1zgz_A 37 GLREIMQNQSVDLILLDINLPDENGLMLTRALRE--RSTVGIILVTGRSDR 85 (122)
T ss_dssp HHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHT--TCCCEEEEEESSCCH
T ss_pred HHHHHHhcCCCCEEEEeCCCCCCChHHHHHHHHh--cCCCCEEEEECCCCh
Confidence 3445556678999999862 2345777777766 577899999887654
No 354
>1nxj_A Probable S-adenosylmethionine:2- demethylmenaquinone methyltransferase; beta/BETA/alpha domain, structural genomics, PSI; HET: TLA; 1.90A {Mycobacterium tuberculosis} SCOP: c.8.7.1
Probab=25.92 E-value=93 Score=27.89 Aligned_cols=46 Identities=28% Similarity=0.434 Sum_probs=32.1
Q ss_pred CCCeEEEEeCCC-------cHHHHHHHHHhCCCceEEEeecCCCCCchhhhhhcCCC
Q 012978 207 ANSDVLVVDMAG-------GLLTGAVAERLGGTGYVCNTCIGDSLYPMDIVRIFNFS 256 (452)
Q Consensus 207 ~g~rvLv~d~~~-------GlltaAv~ermgg~G~v~~~~~~~~~~~~~~~~~~nf~ 256 (452)
+-+.|||+|.++ |=+.++.|...|-.|.|+.-..+| ++.++.++||
T Consensus 85 ~~G~VlVvd~~g~~~~A~~G~~la~~a~~~G~aGiVidG~vRD----~~ei~~l~fP 137 (183)
T 1nxj_A 85 SAGGVLVIDGAGSLHTALVGDVIAELARSTGWTGLIVHGAVRD----AAALRGIDIG 137 (183)
T ss_dssp CSSCEEEEECTTCCSSEEECHHHHHHHHHHTCCEEEEEEEESC----HHHHTTSSSE
T ss_pred CCCCEEEEECCCCCCceeeHHHHHHHHHHCCCcEEEeccccCC----HHHHhcCCCc
Confidence 346899998642 555666666779999999887775 3455666665
No 355
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=25.91 E-value=48 Score=31.76 Aligned_cols=53 Identities=6% Similarity=-0.064 Sum_probs=33.3
Q ss_pred hhhcCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeC---ChHHHHHHHHHHHhcc
Q 012978 348 WKENGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQ---YLQPLATCMHSLQVRK 403 (452)
Q Consensus 348 ~~~~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp---~~epL~e~~~~L~~~~ 403 (452)
+...+.|.++|++| |..-.+.+..+|+-+.++++=-| ..+...++....++.+
T Consensus 63 l~~~~~D~V~i~tp---~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~ 118 (329)
T 3evn_A 63 LADESIDVIYVATI---NQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCN 118 (329)
T ss_dssp HTCTTCCEEEECSC---GGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTT
T ss_pred hcCCCCCEEEECCC---cHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcC
Confidence 33457898888886 44556666677777777666334 4555666666655544
No 356
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=25.89 E-value=1.4e+02 Score=23.42 Aligned_cols=48 Identities=10% Similarity=0.116 Sum_probs=34.3
Q ss_pred HHHHHhhhcCcceEEEeC--CCCChHHHHHhHHhcccCCCcEEEEeCChHH
Q 012978 343 ETLKLWKENGFSSMIVVA--PELDPWSFVKDLLPLLSYSAPFAIYHQYLQP 391 (452)
Q Consensus 343 ~~~~~~~~~~~D~liia~--~~~dP~~il~~ll~~L~pS~p~VVYsp~~ep 391 (452)
++++.+.+..+|.+|++. +..+.++++..+... .|..|+++++.+.++
T Consensus 42 ~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~-~~~~~ii~~s~~~~~ 91 (137)
T 3hdg_A 42 EGERLFGLHAPDVIITDIRMPKLGGLEMLDRIKAG-GAKPYVIVISAFSEM 91 (137)
T ss_dssp HHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHT-TCCCEEEECCCCCCH
T ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHhc-CCCCcEEEEecCcCh
Confidence 445566677899999886 234567778777654 578899999987653
No 357
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=25.79 E-value=40 Score=32.65 Aligned_cols=38 Identities=21% Similarity=0.268 Sum_probs=28.2
Q ss_pred HhcCCCCCCeEEEEeCCC--cHHHHHHHHHhCCCceEEEee
Q 012978 201 SMGNVAANSDVLVVDMAG--GLLTGAVAERLGGTGYVCNTC 239 (452)
Q Consensus 201 ~~anI~~g~rvLv~d~~~--GlltaAv~ermgg~G~v~~~~ 239 (452)
..+++++|.+|||.+.++ |++++.+|..+|+ .+|+...
T Consensus 136 ~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~-~~V~~~~ 175 (349)
T 4a27_A 136 EVANLREGMSVLVHSAGGGVGQAVAQLCSTVPN-VTVFGTA 175 (349)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTT-CEEEEEE
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-cEEEEeC
Confidence 568999999999998744 7777777777764 3566553
No 358
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=25.50 E-value=98 Score=30.06 Aligned_cols=41 Identities=17% Similarity=0.210 Sum_probs=30.4
Q ss_pred HHHHhcCCC-CCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEeec
Q 012978 198 LLLSMGNVA-ANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 198 ~iL~~anI~-~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~~ 240 (452)
+.|..+++. +|.+|||.+.+. |++++.+|..+|- +|+.+..
T Consensus 177 ~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga--~Vi~~~~ 219 (366)
T 1yqd_A 177 SPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGS--KVTVIST 219 (366)
T ss_dssp HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTC--EEEEEES
T ss_pred HHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHHCCC--EEEEEeC
Confidence 345567888 999999998633 7888888888875 6666643
No 359
>1ekj_A Beta-carbonic anhydrase; rossman fold domain, strand exchange, lyase; HET: CIT; 1.93A {Pisum sativum} SCOP: c.53.2.1
Probab=25.39 E-value=75 Score=29.19 Aligned_cols=97 Identities=15% Similarity=0.097 Sum_probs=49.3
Q ss_pred CCChHHHHHHHHhcccccccccc-ccHHHH--HHHhhhccCCcEEEeCC-ChHHHHHHHHhcCcccc------cccch--
Q 012978 126 GATGEEIVEALIANSATFEKKTS-FSQEKY--KLKKQKKYAPKVLLRRP-FARSICEAYFKKNPARI------GFLRV-- 193 (452)
Q Consensus 126 g~sG~eII~~LvenS~tF~~KT~-FSqeKY--lkkK~kKy~~~~~i~~p-t~~~l~e~y~~Kdp~Ki------~~lR~-- 193 (452)
+.++.+.++.|+++...|..... -..+.| +.+.++. .+.++-+ ..|.-.+..|...|.=+ .++-.
T Consensus 7 ~~~p~~~l~~L~~gN~~f~~~~~~~~~~~~~~La~gQ~P---~~lvi~CsDSRV~pe~i~~~~pGdlFVvRNaGN~V~~~ 83 (221)
T 1ekj_A 7 GIPKSEASERIKTGFLHFKKEKYDKNPALYGELAKGQSP---PFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPY 83 (221)
T ss_dssp -----CHHHHHHHHHHHHHHHTTTSCHHHHHHHTTCCCC---SEEEEEECCGGGCHHHHSCCCTTSEEEEEEGGGCCCCS
T ss_pred CCCHHHHHHHHHHHHHHHHhcCcccCHHHHHhhccCCCC---cEEEEEeCCCCCCHHHHhCCCCCcEEEEeccCcccCcc
Confidence 45667788899999998876442 112222 2223333 4445444 55666678887777433 33322
Q ss_pred ------hHHHHHHHhcCCCCCCeEEEEeCCC-cHHHHHH
Q 012978 194 ------DMLSLLLSMGNVAANSDVLVVDMAG-GLLTGAV 225 (452)
Q Consensus 194 ------DtLa~iL~~anI~~g~rvLv~d~~~-GlltaAv 225 (452)
+++|-|.....+=.=..++|+++.+ |.+.||+
T Consensus 84 d~~~~~~~~asleyAv~~L~v~~IvV~GHs~CGav~Aa~ 122 (221)
T 1ekj_A 84 DQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLL 122 (221)
T ss_dssp CTTTCHHHHHHHHHHHHTSCCSEEEEEEESSCHHHHHHH
T ss_pred cccccchhHHHHHHHHHhcCCCEEEEEccCCCCceeeec
Confidence 2333333222222236788888844 5556655
No 360
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=25.28 E-value=1.9e+02 Score=23.21 Aligned_cols=49 Identities=8% Similarity=0.110 Sum_probs=35.8
Q ss_pred HHHHHHhhhcCcceEEEeCC--CCChHHHHHhHHhcccCCCcEEEEeCChHH
Q 012978 342 QETLKLWKENGFSSMIVVAP--ELDPWSFVKDLLPLLSYSAPFAIYHQYLQP 391 (452)
Q Consensus 342 ~~~~~~~~~~~~D~liia~~--~~dP~~il~~ll~~L~pS~p~VVYsp~~ep 391 (452)
.++++.+.+..+|.+|++.. ..+.++++..+... .|..|+++++....+
T Consensus 56 ~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~-~~~~~ii~ls~~~~~ 106 (150)
T 4e7p_A 56 QEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSE-KLETKVVVVTTFKRA 106 (150)
T ss_dssp HHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHT-TCSCEEEEEESCCCH
T ss_pred HHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHh-CCCCeEEEEeCCCCH
Confidence 45566677788999998862 34567777777664 578899999988664
No 361
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=25.22 E-value=2.1e+02 Score=22.41 Aligned_cols=48 Identities=13% Similarity=0.178 Sum_probs=33.5
Q ss_pred HHHHHhh--hcCcceEEEeCC--CCChHHHHHhHHhcccCCCcEEEEeCChHH
Q 012978 343 ETLKLWK--ENGFSSMIVVAP--ELDPWSFVKDLLPLLSYSAPFAIYHQYLQP 391 (452)
Q Consensus 343 ~~~~~~~--~~~~D~liia~~--~~dP~~il~~ll~~L~pS~p~VVYsp~~ep 391 (452)
++++.+. ...+|.+|++.. ..+.++++..+... .|..|+++++...+.
T Consensus 38 ~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~-~~~~~ii~ls~~~~~ 89 (143)
T 3jte_A 38 EGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKI-TPHMAVIILTGHGDL 89 (143)
T ss_dssp HHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHH-CTTCEEEEEECTTCH
T ss_pred HHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHh-CCCCeEEEEECCCCH
Confidence 4445555 467999999862 23557777777654 578899999987654
No 362
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=25.21 E-value=1.3e+02 Score=23.67 Aligned_cols=49 Identities=10% Similarity=0.203 Sum_probs=32.4
Q ss_pred HHHHHHhhhcCcceEEEeC-CCCChHHHHHhHHhcccCCCcEEEEeCChHH
Q 012978 342 QETLKLWKENGFSSMIVVA-PELDPWSFVKDLLPLLSYSAPFAIYHQYLQP 391 (452)
Q Consensus 342 ~~~~~~~~~~~~D~liia~-~~~dP~~il~~ll~~L~pS~p~VVYsp~~ep 391 (452)
.++++.+....+|.+|++. +..+.++++..+... .+..|+++++.....
T Consensus 38 ~~a~~~l~~~~~dlvi~d~~~~~~g~~~~~~l~~~-~~~~pii~ls~~~~~ 87 (142)
T 2qxy_A 38 QEAFTFLRREKIDLVFVDVFEGEESLNLIRRIREE-FPDTKVAVLSAYVDK 87 (142)
T ss_dssp HHHHHHHTTSCCSEEEEECTTTHHHHHHHHHHHHH-CTTCEEEEEESCCCH
T ss_pred HHHHHHHhccCCCEEEEeCCCCCcHHHHHHHHHHH-CCCCCEEEEECCCCH
Confidence 3455666677899999986 112234556655543 567899999987653
No 363
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=25.20 E-value=97 Score=28.38 Aligned_cols=85 Identities=7% Similarity=-0.092 Sum_probs=48.5
Q ss_pred cCcceEEEeC------CC-CChHHHHHhHHhcccCCCcEEEEeCChH---------------HHHHHHHHHHhccCccce
Q 012978 351 NGFSSMIVVA------PE-LDPWSFVKDLLPLLSYSAPFAIYHQYLQ---------------PLATCMHSLQVRKMAIGL 408 (452)
Q Consensus 351 ~~~D~liia~------~~-~dP~~il~~ll~~L~pS~p~VVYsp~~e---------------pL~e~~~~L~~~~~~v~l 408 (452)
+.||.++... +. .++..++..+...|+|||.|++-....+ ...++...|... +|..+
T Consensus 155 ~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~a-GF~i~ 233 (263)
T 2a14_A 155 PLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDA-GFDIE 233 (263)
T ss_dssp CCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHT-TEEEE
T ss_pred CCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHC-CCEEE
Confidence 5799666641 10 1335789999999999999887632110 224555666654 47666
Q ss_pred eeeeeeeeeeeecCCCCCCCCcccCceEEEEEEEEec
Q 012978 409 QISEPWLREYQVLPSRTHPCMQMSGCGGYILSGTRTA 445 (452)
Q Consensus 409 ~l~E~~lR~yQVLP~RTHP~m~m~~~~GyiLsg~kv~ 445 (452)
++.+.- |.+ .+.+ ....+-|++.|+|..
T Consensus 234 ~~~~~~-~~~-------~~~~-~~~~~~~~~~a~K~~ 261 (263)
T 2a14_A 234 QLLHSP-QSY-------SVTN-AANNGVCCIVARKKP 261 (263)
T ss_dssp EEEEEC-CCC-------CTTT-CCCCCEEEEEEEECC
T ss_pred EEeecc-ccc-------cccc-CCCCceEEEEEEecC
Confidence 665532 222 2221 112245778898854
No 364
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=25.18 E-value=58 Score=30.99 Aligned_cols=49 Identities=8% Similarity=0.042 Sum_probs=38.4
Q ss_pred cCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeCChHHHHHHHHHH
Q 012978 351 NGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQYLQPLATCMHSL 399 (452)
Q Consensus 351 ~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L 399 (452)
..+|-+|+++|.++-.++++.+.|+|.++.++|....-+++...+...+
T Consensus 68 ~~~D~vilavk~~~~~~~l~~l~~~l~~~~~iv~l~nGi~~~~~l~~~~ 116 (312)
T 3hn2_A 68 GPMDLVLVGLKTFANSRYEELIRPLVEEGTQILTLQNGLGNEEALATLF 116 (312)
T ss_dssp CCCSEEEECCCGGGGGGHHHHHGGGCCTTCEEEECCSSSSHHHHHHHHT
T ss_pred CCCCEEEEecCCCCcHHHHHHHHhhcCCCCEEEEecCCCCcHHHHHHHC
Confidence 4789999999876667889999999999888888777776655444444
No 365
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=25.15 E-value=44 Score=33.59 Aligned_cols=38 Identities=8% Similarity=-0.064 Sum_probs=32.2
Q ss_pred CCCCCCeEEEEeCCCcHHHHHHHHHhCC-CceEEEeecC
Q 012978 204 NVAANSDVLVVDMAGGLLTGAVAERLGG-TGYVCNTCIG 241 (452)
Q Consensus 204 nI~~g~rvLv~d~~~GlltaAv~ermgg-~G~v~~~~~~ 241 (452)
.+++|..|+-++..-|..+..++.+.++ .|+|+.+++.
T Consensus 223 ~l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~ 261 (409)
T 2py6_A 223 RFSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPD 261 (409)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCC
T ss_pred ccCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCC
Confidence 5689999999999999999988866665 4999999874
No 366
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=24.78 E-value=56 Score=31.68 Aligned_cols=31 Identities=16% Similarity=0.178 Sum_probs=25.6
Q ss_pred HhcCCCCCCeEEEEeCCC--cHHHHHHHHHhCC
Q 012978 201 SMGNVAANSDVLVVDMAG--GLLTGAVAERLGG 231 (452)
Q Consensus 201 ~~anI~~g~rvLv~d~~~--GlltaAv~ermgg 231 (452)
..+++++|.+|||.+.++ |+++..+|..+|.
T Consensus 161 ~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga 193 (357)
T 1zsy_A 161 DFEQLQPGDSVIQNASNSGVGQAVIQIAAALGL 193 (357)
T ss_dssp HSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC
T ss_pred HHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCC
Confidence 347999999999998633 8888889988865
No 367
>3k4i_A Uncharacterized protein; structural genomics, protein structure INI NEW YORK structural genomix research consortium, nysgxrc; 1.69A {Pseudomonas syringae PV}
Probab=24.46 E-value=1.1e+02 Score=28.73 Aligned_cols=47 Identities=26% Similarity=0.302 Sum_probs=33.1
Q ss_pred CCCCeEEEEeCCC-------cHHHHHHHHHhCCCceEEEeecCCCCCchhhhhhcCCC
Q 012978 206 AANSDVLVVDMAG-------GLLTGAVAERLGGTGYVCNTCIGDSLYPMDIVRIFNFS 256 (452)
Q Consensus 206 ~~g~rvLv~d~~~-------GlltaAv~ermgg~G~v~~~~~~~~~~~~~~~~~~nf~ 256 (452)
-+-+.|||+|.++ |=+.++.+...|-.|.|+.-..+| ++.+..++||
T Consensus 81 ~~~GdVlVvd~~g~~~~A~~G~lla~~a~~~G~aGvVidG~vRD----~~ei~~~~fP 134 (244)
T 3k4i_A 81 VPSGSVIVSSNSGRHDCTVWGDIMTHFALANGIKGTVIDGVARD----IDTVINCNYP 134 (244)
T ss_dssp CCTTEEEEEECTTCSSSBSCCHHHHHHHHHHTCCEEEEESBBSC----HHHHHHTTCC
T ss_pred CCCCeEEEEECCCCCCeEehHHHHHHHHHHCCCeEEEeCCccCC----HHHHHhCCCC
Confidence 3567899997532 555666667789999999877765 3456666666
No 368
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=24.18 E-value=88 Score=32.11 Aligned_cols=40 Identities=20% Similarity=0.155 Sum_probs=31.6
Q ss_pred HHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 199 LLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 199 iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
|+......+|.+||.++.+.|.++..++++ |..+|+.++.
T Consensus 150 il~~l~~~~~~~VLDiGcGtG~la~~la~~--~~~~V~gvD~ 189 (480)
T 3b3j_A 150 ILQNHTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEA 189 (480)
T ss_dssp HHHTGGGTTTCEEEEESCSTTHHHHHHHHT--TCSEEEEEEC
T ss_pred HHHhhhhcCCCEEEEecCcccHHHHHHHHc--CCCEEEEEEc
Confidence 555556678999999999999999988874 4458888865
No 369
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=24.16 E-value=52 Score=32.06 Aligned_cols=52 Identities=10% Similarity=0.054 Sum_probs=32.8
Q ss_pred hhhcCcceEEEeCCCCChHHHHHhHHhcccCCCcEEE---EeCChHHHHHHHHHHHhc
Q 012978 348 WKENGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAI---YHQYLQPLATCMHSLQVR 402 (452)
Q Consensus 348 ~~~~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VV---Ysp~~epL~e~~~~L~~~ 402 (452)
+...++|.++|++| +..-.+.+..+|.-+.++++ .+...+...++....++.
T Consensus 61 l~~~~~D~V~i~tp---~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~ 115 (359)
T 3e18_A 61 LADEKVDAVLIATP---NDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRV 115 (359)
T ss_dssp HHCTTCCEEEECSC---GGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHH
T ss_pred hcCCCCCEEEEcCC---cHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHh
Confidence 33457899998886 44456666677777777766 344555666665555543
No 370
>1vi4_A Regulator of ribonuclease acivity A protein 1; structural genomics, unknown function; 1.87A {Vibrio cholerae} SCOP: c.8.7.1
Probab=24.16 E-value=1.6e+02 Score=26.02 Aligned_cols=48 Identities=21% Similarity=0.233 Sum_probs=33.6
Q ss_pred CCCCCeEEEEeCCC-------cHHHHHHHHHhCCCceEEEeecCCCCCchhhhhhcCCC
Q 012978 205 VAANSDVLVVDMAG-------GLLTGAVAERLGGTGYVCNTCIGDSLYPMDIVRIFNFS 256 (452)
Q Consensus 205 I~~g~rvLv~d~~~-------GlltaAv~ermgg~G~v~~~~~~~~~~~~~~~~~~nf~ 256 (452)
-.+-+.|||+|.++ |=+.++.+...|-.|.|+.-..+| ++.+..++||
T Consensus 57 ~~~~G~VlVvd~~g~~~~A~~G~~la~~a~~~G~aGiVidG~vRD----~~~l~~~~~p 111 (174)
T 1vi4_A 57 QNGKGKVLVVDGHGSCHKALMGDQLAILAIKNDWEGVIIYGAVRD----VVAMSEMDLG 111 (174)
T ss_dssp SCCTTEEEEEECTTCCSSEEECHHHHHHHHHTTCCEEEEEEEECC----HHHHTTSSSE
T ss_pred ccCCCEEEEEECCCCCCceehHHHHHHHHHHCCCeEEEeccccCC----HHHHHhCCCC
Confidence 34457999998632 555666677889999999887775 3455666665
No 371
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=24.15 E-value=1.7e+02 Score=22.47 Aligned_cols=50 Identities=16% Similarity=0.342 Sum_probs=35.4
Q ss_pred HHHHHHhhhcCcceEEEeC--CCCChHHHHHhHHhcc-cCCCcEEEEeCChHH
Q 012978 342 QETLKLWKENGFSSMIVVA--PELDPWSFVKDLLPLL-SYSAPFAIYHQYLQP 391 (452)
Q Consensus 342 ~~~~~~~~~~~~D~liia~--~~~dP~~il~~ll~~L-~pS~p~VVYsp~~ep 391 (452)
.++++.+.+..+|.+|++. +..+.++++..+...- .+..|+++++.+.++
T Consensus 37 ~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~ 89 (127)
T 3i42_A 37 TDALHAMSTRGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGFAKN 89 (127)
T ss_dssp HHHHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC-CT
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECCcch
Confidence 3556667778899999986 2345677788776643 577899999987654
No 372
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=23.95 E-value=1.3e+02 Score=23.31 Aligned_cols=49 Identities=10% Similarity=0.148 Sum_probs=34.2
Q ss_pred HHHHHhhhcCcceEEEeCC--CCChHHHHHhHHhcccCCCcEEEEeCChHH
Q 012978 343 ETLKLWKENGFSSMIVVAP--ELDPWSFVKDLLPLLSYSAPFAIYHQYLQP 391 (452)
Q Consensus 343 ~~~~~~~~~~~D~liia~~--~~dP~~il~~ll~~L~pS~p~VVYsp~~ep 391 (452)
++++.+....+|.+|++.. ..+-++++..+.....+..|+++.+.+.+.
T Consensus 39 ~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~~ii~ls~~~~~ 89 (130)
T 1dz3_A 39 DCLQMLEEKRPDILLLDIIMPHLDGLAVLERIRAGFEHQPNVIMLTAFGQE 89 (130)
T ss_dssp HHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHHCSSCCEEEEEEETTCH
T ss_pred HHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCcEEEEecCCCH
Confidence 4455566678999999862 235577788877644577789988887543
No 373
>3egl_A DEGV family protein; alpha-beta-alpha sandwich, methylated lysines, structural GE PSI-2, protein structure initiative; HET: MLY MSE PLM; 2.41A {Corynebacterium glutamicum}
Probab=23.88 E-value=75 Score=30.24 Aligned_cols=88 Identities=10% Similarity=0.051 Sum_probs=56.4
Q ss_pred ccccccCcc---cccCCHHHHHHHHHcCCChHHHHHHHHhccccccccccccHHHHHHHhhhccCCcEEEeCCChHHHHH
Q 012978 102 NRAIVDDNK---AQCLSGEDIDEMRRQGATGEEIVEALIANSATFEKKTSFSQEKYKLKKQKKYAPKVLLRRPFARSICE 178 (452)
Q Consensus 102 Nr~i~Dd~~---~QkLs~eeI~~lK~~g~sG~eII~~LvenS~tF~~KT~FSqeKYlkkK~kKy~~~~~i~~pt~~~l~e 178 (452)
+=.++|... .|.+--.+..+|.++|.+-+||++.|-+.- .+- ++...-.|+.
T Consensus 93 ~I~ViDS~~~s~g~g~~v~~Aa~l~~~G~s~eeI~~~l~~~~-------------------~~~--~~~f~v~~L~---- 147 (277)
T 3egl_A 93 SVRVVDTSSLGMAVGAAAMAAARMAXDGASLQECYDIAVDTL-------------------XRS--ETWIYLHRID---- 147 (277)
T ss_dssp SEEEECCSCCTHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH-------------------HTE--EEEEECSCSH----
T ss_pred CEEEECCCchhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH-------------------hhc--eEEEEcCCHH----
Confidence 456788754 388889999999999999999998876531 111 1122223443
Q ss_pred HHHhcCcccccccchhHHHHHHHhcCCCC-----CCeEEEEeCCCcH
Q 012978 179 AYFKKNPARIGFLRVDMLSLLLSMGNVAA-----NSDVLVVDMAGGL 220 (452)
Q Consensus 179 ~y~~Kdp~Ki~~lR~DtLa~iL~~anI~~-----g~rvLv~d~~~Gl 220 (452)
|..|. .||.. +-|.+-++.||+| ++++.+++-.-|.
T Consensus 148 -~L~kG-GRis~----~~a~ig~lL~IKPIl~~~dG~l~~~~KvRg~ 188 (277)
T 3egl_A 148 -EIWXS-GRIST----ATAMVSTALATRPIMRFNGGRMEIAAXTRTQ 188 (277)
T ss_dssp -HHHHT-TCSCT----TTCSSGGGGCSSCEEEEETTEEEEEECCCSH
T ss_pred -HHhhC-Cccch----HHHHHhhccceEEEEEEeCCEEEEEEecCCh
Confidence 22222 11111 2366667779988 6788888888776
No 374
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=23.86 E-value=2.1e+02 Score=22.38 Aligned_cols=48 Identities=13% Similarity=0.209 Sum_probs=33.2
Q ss_pred HHHHHhhhcCcceEEEeCC--CCChHHHHHhHHhcccCCCcEEEEeCChHH
Q 012978 343 ETLKLWKENGFSSMIVVAP--ELDPWSFVKDLLPLLSYSAPFAIYHQYLQP 391 (452)
Q Consensus 343 ~~~~~~~~~~~D~liia~~--~~dP~~il~~ll~~L~pS~p~VVYsp~~ep 391 (452)
++++.+....+|.+|++.. ..+-.+++..+.. ..|..|+++.+.+.+.
T Consensus 40 ~al~~~~~~~~dlvilD~~lp~~~g~~~~~~l~~-~~~~~~ii~ls~~~~~ 89 (133)
T 3b2n_A 40 DAMKLIEEYNPNVVILDIEMPGMTGLEVLAEIRK-KHLNIKVIIVTTFKRP 89 (133)
T ss_dssp HHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHH-TTCSCEEEEEESCCCH
T ss_pred HHHHHHhhcCCCEEEEecCCCCCCHHHHHHHHHH-HCCCCcEEEEecCCCH
Confidence 4455566678998888862 2344677777765 3578899999987653
No 375
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=23.81 E-value=1.1e+02 Score=29.07 Aligned_cols=48 Identities=15% Similarity=0.147 Sum_probs=37.9
Q ss_pred chhHHHHHHHhcCCCCCCeEEEEeCCC-------c--HHHHHHHHHhCCCceEEEee
Q 012978 192 RVDMLSLLLSMGNVAANSDVLVVDMAG-------G--LLTGAVAERLGGTGYVCNTC 239 (452)
Q Consensus 192 R~DtLa~iL~~anI~~g~rvLv~d~~~-------G--lltaAv~ermgg~G~v~~~~ 239 (452)
..+.|..-|.-.+|++|+.+||=-+-+ | .|..|+++.+|.+|+|+-..
T Consensus 16 t~~~l~~~L~~LGi~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLvmPt 72 (268)
T 3ijw_A 16 TIKTITNDLRKLGLKKGMTVIVHSSLSSIGWISGGAVAVVEALMEVITEEGTIIMPT 72 (268)
T ss_dssp CHHHHHHHHHHHTCCTTCEEEEEECTGGGCCBTTHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred CHHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEEEec
Confidence 446688889999999999999975532 2 34668999999999998653
No 376
>1pzx_A Hypothetical protein APC36103; structural genomics, two domains containing mixed alpha/beta structures, PSI; HET: PLM; 2.00A {Geobacillus stearothermophilus} SCOP: c.119.1.1
Probab=23.77 E-value=70 Score=30.60 Aligned_cols=88 Identities=14% Similarity=0.169 Sum_probs=49.2
Q ss_pred ccccccCcc---cccCCHHHHHHHHHcCCChHHHHHHHHhccccccccccccHHHHHHHhhhccCCcEEEeCCChHHHHH
Q 012978 102 NRAIVDDNK---AQCLSGEDIDEMRRQGATGEEIVEALIANSATFEKKTSFSQEKYKLKKQKKYAPKVLLRRPFARSICE 178 (452)
Q Consensus 102 Nr~i~Dd~~---~QkLs~eeI~~lK~~g~sG~eII~~LvenS~tF~~KT~FSqeKYlkkK~kKy~~~~~i~~pt~~~l~e 178 (452)
+=.++|... .|.+--.+..+|.++|.+-+||++.|-+... + . ++...-.|+.
T Consensus 115 ~I~ViDS~~~s~g~g~~v~~A~~l~~~G~s~eeI~~~l~~~~~-------------------~-~-~~~f~v~~L~---- 169 (289)
T 1pzx_A 115 RLTIIDSKCASLGQGLAVMKAVELAKQNTPYNLLCETIESYCR-------------------H-M-EHIFTVDNLD---- 169 (289)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH-------------------T-E-EEEEECSCHH----
T ss_pred eEEEEcCchhhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh-------------------c-C-EEEEEeCCHH----
Confidence 445788754 3889999999999999999999998865311 0 0 1112222332
Q ss_pred HHHhcCcccccccchhHHHHHHHhcCCCC-----CCeEEEEeCCCcH
Q 012978 179 AYFKKNPARIGFLRVDMLSLLLSMGNVAA-----NSDVLVVDMAGGL 220 (452)
Q Consensus 179 ~y~~Kdp~Ki~~lR~DtLa~iL~~anI~~-----g~rvLv~d~~~Gl 220 (452)
|+.|. .||.. +-|.+-++.||+| +|++.+++-+.|.
T Consensus 170 -~L~kG-GRis~----~~a~ig~lL~IKPil~~~~G~l~~~~KvRg~ 210 (289)
T 1pzx_A 170 -YLARG-GRISK----TAAAFGGLLNIKPLLHVEDGALIPLEKWRGR 210 (289)
T ss_dssp -HHHHH-TSCC--------------CEEEEEEEETTEEEEEEEEESH
T ss_pred -HHHHC-CCccH----HHHHHHHhhCceEEEEEECCEEEEeeccCCH
Confidence 22221 11111 2367777789887 6788888887775
No 377
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=23.76 E-value=1.9e+02 Score=22.18 Aligned_cols=48 Identities=8% Similarity=0.048 Sum_probs=32.9
Q ss_pred HHHHHhhhcCcceEEEeCC--CCChHHHHHhHHhcccCCCcEEEEeCChHH
Q 012978 343 ETLKLWKENGFSSMIVVAP--ELDPWSFVKDLLPLLSYSAPFAIYHQYLQP 391 (452)
Q Consensus 343 ~~~~~~~~~~~D~liia~~--~~dP~~il~~ll~~L~pS~p~VVYsp~~ep 391 (452)
++++.+....+|.+|++.. ..+-.+++..+.. ..|..|+++++.+.++
T Consensus 38 ~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~-~~~~~~ii~~s~~~~~ 87 (126)
T 1dbw_A 38 AFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGD-LKINIPSIVITGHGDV 87 (126)
T ss_dssp HHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHH-TTCCCCEEEEECTTCH
T ss_pred HHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHh-cCCCCCEEEEECCCCH
Confidence 4455566677999998862 2345667776655 3578899999988653
No 378
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=23.65 E-value=1.1e+02 Score=24.12 Aligned_cols=49 Identities=10% Similarity=0.040 Sum_probs=30.0
Q ss_pred HHHHHHhhhcCcceEEEeCC--CCChHHHHHhHHhccc-CCCcEEEEeCChH
Q 012978 342 QETLKLWKENGFSSMIVVAP--ELDPWSFVKDLLPLLS-YSAPFAIYHQYLQ 390 (452)
Q Consensus 342 ~~~~~~~~~~~~D~liia~~--~~dP~~il~~ll~~L~-pS~p~VVYsp~~e 390 (452)
.++++.+.+..+|.+|++.. ..+.++++..+...-. +..|+++++....
T Consensus 36 ~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~ 87 (140)
T 3n53_A 36 KEALEQIDHHHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSSEH 87 (140)
T ss_dssp HHHHHHHHHHCCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC--
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecCCC
Confidence 34556666778999999862 2344666666655433 7789999988754
No 379
>2pcn_A S-adenosylmethionine:2-demethylmenaquinone methyltransferase; beta, beta alpha domain; 1.90A {Geobacillus kaustophilus}
Probab=23.48 E-value=1.2e+02 Score=26.56 Aligned_cols=45 Identities=31% Similarity=0.397 Sum_probs=32.2
Q ss_pred CCeEEEEeCCC-------cHHHHHHHHHhCCCceEEEeecCCCCCchhhhhhcCCC
Q 012978 208 NSDVLVVDMAG-------GLLTGAVAERLGGTGYVCNTCIGDSLYPMDIVRIFNFS 256 (452)
Q Consensus 208 g~rvLv~d~~~-------GlltaAv~ermgg~G~v~~~~~~~~~~~~~~~~~~nf~ 256 (452)
-++|||+|..+ |=+.++.+.+.|-.|.|+.-..+|. +.++.|+||
T Consensus 55 ~G~VlVvd~~g~~~~a~~G~~la~~a~~~G~~GiVidG~vRD~----~~i~~~~~p 106 (161)
T 2pcn_A 55 PGTVLVVDGKGSRRVALLGDRLAQIACERGLAGVIIHGCIRDS----AEIGAMPIG 106 (161)
T ss_dssp TTCEEEEECTTCCSSEEECHHHHHHHHHTTCCEEEEEEEESCH----HHHTTSSSE
T ss_pred CCCEEEEECCCCCCceeehHHHHHHHHHcCCcEEEecccccCH----HHHhcCCCc
Confidence 45899998632 5566666778899999998877753 455666665
No 380
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=23.28 E-value=1.6e+02 Score=21.79 Aligned_cols=49 Identities=8% Similarity=0.042 Sum_probs=33.8
Q ss_pred HHHHHhhhcCcceEEEeCC--CCChHHHHHhHHhccc-CCCcEEEEeCChHH
Q 012978 343 ETLKLWKENGFSSMIVVAP--ELDPWSFVKDLLPLLS-YSAPFAIYHQYLQP 391 (452)
Q Consensus 343 ~~~~~~~~~~~D~liia~~--~~dP~~il~~ll~~L~-pS~p~VVYsp~~ep 391 (452)
++.+.+....+|.+|++.. ..+.++++..+...-. +..|+++++.....
T Consensus 36 ~~~~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~~~~~~~ 87 (119)
T 2j48_A 36 TALDQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLGEPPV 87 (119)
T ss_dssp HHHHHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEESSCCS
T ss_pred HHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEEeCCCCc
Confidence 4455566678999999863 2345677777766542 77899999887554
No 381
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=23.04 E-value=43 Score=32.44 Aligned_cols=52 Identities=6% Similarity=0.003 Sum_probs=32.4
Q ss_pred hhhcCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeC---ChHHHHHHHHHHHhc
Q 012978 348 WKENGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQ---YLQPLATCMHSLQVR 402 (452)
Q Consensus 348 ~~~~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp---~~epL~e~~~~L~~~ 402 (452)
+...+.|.++|++| |..-.+.+..+|.-+.++++=-| ..+...++....++.
T Consensus 62 l~~~~~D~V~i~tp---~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~ 116 (354)
T 3db2_A 62 LAREDVEMVIITVP---NDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKET 116 (354)
T ss_dssp HHCSSCCEEEECSC---TTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHH
T ss_pred hcCCCCCEEEEeCC---hHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHc
Confidence 33467899999886 33445556667777777766444 445555555555543
No 382
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=22.97 E-value=1.7e+02 Score=22.99 Aligned_cols=41 Identities=15% Similarity=0.314 Sum_probs=30.1
Q ss_pred cCcceEEEeC--CCCChHHHHHhHHhcccCCCcEEEEeCChHH
Q 012978 351 NGFSSMIVVA--PELDPWSFVKDLLPLLSYSAPFAIYHQYLQP 391 (452)
Q Consensus 351 ~~~D~liia~--~~~dP~~il~~ll~~L~pS~p~VVYsp~~ep 391 (452)
..+|.+|++. |..+-++++..+.....+..|+++.+.+.++
T Consensus 51 ~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~lt~~~~~ 93 (133)
T 2r25_B 51 ENYNMIFMDVQMPKVDGLLSTKMIRRDLGYTSPIVALTAFADD 93 (133)
T ss_dssp CCCSEEEECSCCSSSCHHHHHHHHHHHSCCCSCEEEEESCCSH
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHhhcCCCCCEEEEECCCCH
Confidence 5799999886 3345577888777655567799999988654
No 383
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=22.90 E-value=1.7e+02 Score=22.45 Aligned_cols=47 Identities=11% Similarity=0.147 Sum_probs=32.9
Q ss_pred HHHHHhhhcCcceEEEeCC--CCChHHHHHhHHhcccCCCcEEEEeCChH
Q 012978 343 ETLKLWKENGFSSMIVVAP--ELDPWSFVKDLLPLLSYSAPFAIYHQYLQ 390 (452)
Q Consensus 343 ~~~~~~~~~~~D~liia~~--~~dP~~il~~ll~~L~pS~p~VVYsp~~e 390 (452)
++++.+....+|.+|++.. ..+-++++..+... .|..|+++.+.+.+
T Consensus 38 ~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~-~~~~~ii~~s~~~~ 86 (124)
T 1srr_A 38 QALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVI-DENIRVIIMTAYGE 86 (124)
T ss_dssp HHHHHHHHHCCSEEEEESCCTTCCHHHHHHHHHHH-CTTCEEEEEESSCC
T ss_pred HHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHh-CCCCCEEEEEccCc
Confidence 4445555678999999862 23456777776654 67889999998755
No 384
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=22.78 E-value=3.2e+02 Score=22.46 Aligned_cols=36 Identities=14% Similarity=0.125 Sum_probs=19.4
Q ss_pred cCCCCCCeEEEEeCCC-cHHHHHHHHHhCCCceEEEeec
Q 012978 203 GNVAANSDVLVVDMAG-GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 203 anI~~g~rvLv~d~~~-GlltaAv~ermgg~G~v~~~~~ 240 (452)
.-..++.+|+|++.+. |...+..+.+.|- .|+.+..
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~--~V~vid~ 50 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGH--SVVVVDK 50 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTC--EEEEEES
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCC--eEEEEEC
Confidence 3445689999998532 4444554444432 4555543
No 385
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=22.65 E-value=1.4e+02 Score=24.18 Aligned_cols=48 Identities=15% Similarity=0.108 Sum_probs=33.3
Q ss_pred HHHHHhhhcCcceEEEeCC--CCChHHHHHhHHhcccCCCcEEEEeCChHH
Q 012978 343 ETLKLWKENGFSSMIVVAP--ELDPWSFVKDLLPLLSYSAPFAIYHQYLQP 391 (452)
Q Consensus 343 ~~~~~~~~~~~D~liia~~--~~dP~~il~~ll~~L~pS~p~VVYsp~~ep 391 (452)
++++.+....+|.+|++.. ..+.+.++..+... .|..|+++++....+
T Consensus 38 ~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~-~~~~pii~ls~~~~~ 87 (155)
T 1qkk_A 38 EALAGLSADFAGIVISDIRMPGMDGLALFRKILAL-DPDLPMILVTGHGDI 87 (155)
T ss_dssp HHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHH-CTTSCEEEEECGGGH
T ss_pred HHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhh-CCCCCEEEEECCCCh
Confidence 4445555677999999862 23456777777654 578899999987653
No 386
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=22.55 E-value=57 Score=31.17 Aligned_cols=50 Identities=4% Similarity=0.097 Sum_probs=30.0
Q ss_pred hcCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEE---eCChHHHHHHHHHHHhc
Q 012978 350 ENGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIY---HQYLQPLATCMHSLQVR 402 (452)
Q Consensus 350 ~~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVY---sp~~epL~e~~~~L~~~ 402 (452)
..+.|.++|++| |..-.+.+...|.-+.++++= +...+...++....++.
T Consensus 61 ~~~~D~V~i~tp---~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~ 113 (331)
T 4hkt_A 61 AADIDAVVICTP---TDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDT 113 (331)
T ss_dssp CTTCCEEEECSC---GGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCC---chhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHc
Confidence 347888888876 444556666667666666553 33455555555555543
No 387
>2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural genomics, structural consortium, SGC, alternative initiation, ATP-binding, devel protein; 2.80A {Homo sapiens}
Probab=22.55 E-value=1.2e+02 Score=25.75 Aligned_cols=34 Identities=6% Similarity=-0.082 Sum_probs=21.4
Q ss_pred HHHhHHhcccCCCcEEEEeCChHHHHHHHHHHHhc
Q 012978 368 FVKDLLPLLSYSAPFAIYHQYLQPLATCMHSLQVR 402 (452)
Q Consensus 368 il~~ll~~L~pS~p~VVYsp~~epL~e~~~~L~~~ 402 (452)
.|..++..+ +.++++|||++...+..+...|+..
T Consensus 24 ~L~~ll~~~-~~~~~lVF~~~~~~~~~l~~~L~~~ 57 (175)
T 2rb4_A 24 ALCNIYGSI-TIGQAIIFCQTRRNAKWLTVEMIQD 57 (175)
T ss_dssp HHHHHHTTS-CCSEEEEECSCHHHHHHHHHHHHTT
T ss_pred HHHHHHHhC-CCCCEEEEECCHHHHHHHHHHHHHc
Confidence 333344333 3457788888887777777777653
No 388
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=22.42 E-value=1.6e+02 Score=23.61 Aligned_cols=47 Identities=11% Similarity=0.102 Sum_probs=32.7
Q ss_pred HHHHHhhhcCcceEEEeCC--CCChHHHHHhHHhcccCCCcEEEEeCChH
Q 012978 343 ETLKLWKENGFSSMIVVAP--ELDPWSFVKDLLPLLSYSAPFAIYHQYLQ 390 (452)
Q Consensus 343 ~~~~~~~~~~~D~liia~~--~~dP~~il~~ll~~L~pS~p~VVYsp~~e 390 (452)
++++.+.+..+|.+|++.. ..+-++++..+... .|..|+++++....
T Consensus 42 ~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~-~~~~~ii~ls~~~~ 90 (153)
T 3cz5_A 42 EAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQW-DGAARILIFTMHQG 90 (153)
T ss_dssp HHHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHH-CTTCCEEEEESCCS
T ss_pred HHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHh-CCCCeEEEEECCCC
Confidence 4455666778998888762 23456777776664 57788999987754
No 389
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=22.41 E-value=52 Score=32.88 Aligned_cols=49 Identities=24% Similarity=0.234 Sum_probs=32.7
Q ss_pred cchhHHHH-HHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeecC
Q 012978 191 LRVDMLSL-LLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCIG 241 (452)
Q Consensus 191 lR~DtLa~-iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~~ 241 (452)
.|.++.-. |+....+..|..||.+++|.|+|+...| +.|. .+|+.++..
T Consensus 66 ~Rt~aY~~Ai~~~~~~~~~k~VLDvG~GtGiLs~~Aa-~aGA-~~V~ave~s 115 (376)
T 4hc4_A 66 VRTDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCA-QAGA-RRVYAVEAS 115 (376)
T ss_dssp HHHHHHHHHHHTTHHHHTTCEEEEETCTTSHHHHHHH-HTTC-SEEEEEECS
T ss_pred HHHHHHHHHHHhCHHhcCCCEEEEeCCCccHHHHHHH-HhCC-CEEEEEeCh
Confidence 34444433 3333445679999999999999876554 4544 489999864
No 390
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=22.35 E-value=1.5e+02 Score=22.28 Aligned_cols=47 Identities=17% Similarity=0.191 Sum_probs=33.0
Q ss_pred HHHHHhhhcCcceEEEeCC--CCChHHHHHhHHhcccCCCcEEEEeCChHH
Q 012978 343 ETLKLWKENGFSSMIVVAP--ELDPWSFVKDLLPLLSYSAPFAIYHQYLQP 391 (452)
Q Consensus 343 ~~~~~~~~~~~D~liia~~--~~dP~~il~~ll~~L~pS~p~VVYsp~~ep 391 (452)
++++.+....+|.+|++.. ..+-.+++..+.. .+..|+++++.+.+.
T Consensus 36 ~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~--~~~~~ii~~s~~~~~ 84 (120)
T 2a9o_A 36 EALEQFEAEQPDIIILDLMLPEIDGLEVAKTIRK--TSSVPILMLSAKDSE 84 (120)
T ss_dssp HHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHH--HCCCCEEEEESCCSH
T ss_pred HHHHHHHhCCCCEEEEeccCCCCCHHHHHHHHHh--CCCCCEEEEecCCch
Confidence 4445556678998888862 2345777777776 377899999987654
No 391
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=22.33 E-value=1.6e+02 Score=22.93 Aligned_cols=48 Identities=10% Similarity=0.030 Sum_probs=32.3
Q ss_pred HHHHHhhhcCcceEEEeCC--CCChHHHHHhHHhcccCCCcEEEEeCChHH
Q 012978 343 ETLKLWKENGFSSMIVVAP--ELDPWSFVKDLLPLLSYSAPFAIYHQYLQP 391 (452)
Q Consensus 343 ~~~~~~~~~~~D~liia~~--~~dP~~il~~ll~~L~pS~p~VVYsp~~ep 391 (452)
++++.+.+..+|.+|++.. ..+.++++..+.. ..|..|+++++...++
T Consensus 37 ~a~~~~~~~~~dlii~d~~l~~~~g~~~~~~l~~-~~~~~~ii~~s~~~~~ 86 (134)
T 3f6c_A 37 SAVQRVETLKPDIVIIDVDIPGVNGIQVLETLRK-RQYSGIIIIVSAKNDH 86 (134)
T ss_dssp THHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHH-TTCCSEEEEEECC---
T ss_pred HHHHHHHhcCCCEEEEecCCCCCChHHHHHHHHh-cCCCCeEEEEeCCCCh
Confidence 3445556678999999862 2456777777765 3678899999987664
No 392
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=22.17 E-value=1.8e+02 Score=23.35 Aligned_cols=47 Identities=13% Similarity=0.118 Sum_probs=33.0
Q ss_pred HHHHHhhhcCcceEEEeCC--CCChHHHHHhHHhcccCCCcEEEEeCChH
Q 012978 343 ETLKLWKENGFSSMIVVAP--ELDPWSFVKDLLPLLSYSAPFAIYHQYLQ 390 (452)
Q Consensus 343 ~~~~~~~~~~~D~liia~~--~~dP~~il~~ll~~L~pS~p~VVYsp~~e 390 (452)
++++.+....+|.+|++.. ..+...++..+.. ..|..|+++++.+.+
T Consensus 42 ~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~-~~~~~~ii~ls~~~~ 90 (154)
T 2rjn_A 42 DALEALKGTSVQLVISDMRMPEMGGEVFLEQVAK-SYPDIERVVISGYAD 90 (154)
T ss_dssp HHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHH-HCTTSEEEEEECGGG
T ss_pred HHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHH-hCCCCcEEEEecCCC
Confidence 4555666678999998863 2355677777665 346789999988765
No 393
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=22.17 E-value=1.8e+02 Score=22.17 Aligned_cols=47 Identities=9% Similarity=0.046 Sum_probs=33.2
Q ss_pred HHHHHhhhcCcceEEEeCC--CCChHHHHHhHHhcccCCCcEEEEeCChHH
Q 012978 343 ETLKLWKENGFSSMIVVAP--ELDPWSFVKDLLPLLSYSAPFAIYHQYLQP 391 (452)
Q Consensus 343 ~~~~~~~~~~~D~liia~~--~~dP~~il~~ll~~L~pS~p~VVYsp~~ep 391 (452)
++++.+....+|.+|++.. ..+-++++..+... +..|+++.+.+.+.
T Consensus 38 ~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~--~~~~ii~~s~~~~~ 86 (123)
T 1xhf_A 38 EMHQILSEYDINLVIMDINLPGKNGLLLARELREQ--ANVALMFLTGRDNE 86 (123)
T ss_dssp HHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHH--CCCEEEEEESCCSH
T ss_pred HHHHHHhcCCCCEEEEcCCCCCCCHHHHHHHHHhC--CCCcEEEEECCCCh
Confidence 4455566678998988862 23557777777665 77899999887654
No 394
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=22.13 E-value=58 Score=31.72 Aligned_cols=52 Identities=6% Similarity=-0.040 Sum_probs=31.4
Q ss_pred hhhcCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeC---ChHHHHHHHHHHHhc
Q 012978 348 WKENGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQ---YLQPLATCMHSLQVR 402 (452)
Q Consensus 348 ~~~~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp---~~epL~e~~~~L~~~ 402 (452)
+...++|.++|++| +..-.+.+..+|.-+.++++=-| ..+...++....++.
T Consensus 61 l~~~~vD~V~i~tp---~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~ 115 (362)
T 3fhl_A 61 TEDPEIDLIVVNTP---DNTHYEYAGMALEAGKNVVVEKPFTSTTKQGEELIALAKKK 115 (362)
T ss_dssp HTCTTCCEEEECSC---GGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHH
T ss_pred hcCCCCCEEEEeCC---hHHHHHHHHHHHHCCCeEEEecCCCCCHHHHHHHHHHHHHc
Confidence 33456888888876 33445666667777777666334 555555555555443
No 395
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=22.06 E-value=2e+02 Score=24.97 Aligned_cols=44 Identities=11% Similarity=0.106 Sum_probs=32.8
Q ss_pred HHHHHhhhcCcceEEEeCCCCChHHHHHhHHhcccC-CCcEEEEeCChH
Q 012978 343 ETLKLWKENGFSSMIVVAPELDPWSFVKDLLPLLSY-SAPFAIYHQYLQ 390 (452)
Q Consensus 343 ~~~~~~~~~~~D~liia~~~~dP~~il~~ll~~L~p-S~p~VVYsp~~e 390 (452)
++++.+....+|.+| .|..+-++++..+... | ..|+++++.+..
T Consensus 35 ~al~~l~~~~~dlvi--lp~~~g~~~~~~lr~~--~~~~~ii~lt~~~~ 79 (223)
T 2hqr_A 35 DGEYLMDIRNYDLVM--VSDKNALSFVSRIKEK--HSSIVVLVSSDNPT 79 (223)
T ss_dssp HHHHHHTTSCCSEEE--ECCTTHHHHHHHHHHH--CTTSEEEEEESSCC
T ss_pred HHHHHHhcCCCCEEE--eCCCCHHHHHHHHHhC--CCCCcEEEEECCCC
Confidence 445566667789666 5667888888888877 5 789999988744
No 396
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=21.98 E-value=84 Score=29.80 Aligned_cols=37 Identities=22% Similarity=0.202 Sum_probs=28.5
Q ss_pred hcCCCCCC-eEEEEeCCC--cHHHHHHHHHhCCCceEEEeec
Q 012978 202 MGNVAANS-DVLVVDMAG--GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 202 ~anI~~g~-rvLv~d~~~--GlltaAv~ermgg~G~v~~~~~ 240 (452)
.+++++|. +|||.+.++ |+++..+|.++|. +|+....
T Consensus 143 ~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga--~vi~~~~ 182 (328)
T 1xa0_A 143 EHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY--TVEASTG 182 (328)
T ss_dssp HTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC--CEEEEES
T ss_pred hcCCCCCCceEEEecCCCHHHHHHHHHHHHCCC--EEEEEEC
Confidence 47899996 999998644 7888888888875 5666654
No 397
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=21.88 E-value=2.6e+02 Score=24.25 Aligned_cols=47 Identities=13% Similarity=0.090 Sum_probs=34.6
Q ss_pred HHHHHhhhcCcceEEEeCC--CCChHHHHHhHHhcccCCCcEEEEeCChHH
Q 012978 343 ETLKLWKENGFSSMIVVAP--ELDPWSFVKDLLPLLSYSAPFAIYHQYLQP 391 (452)
Q Consensus 343 ~~~~~~~~~~~D~liia~~--~~dP~~il~~ll~~L~pS~p~VVYsp~~ep 391 (452)
++++.+....+|.+|++.. ..+-++++..+... |..|+++++.+.++
T Consensus 39 ~al~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~--~~~~ii~lt~~~~~ 87 (230)
T 2oqr_A 39 AALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRAR--SSVPVIMVTARDSE 87 (230)
T ss_dssp HHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHHH--CSCSEEEEECCHHH
T ss_pred HHHHHHhccCCCEEEEECCCCCCCHHHHHHHHHcC--CCCCEEEEeCCCcH
Confidence 4455556678999999862 34567888888773 78999999988664
No 398
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=21.85 E-value=1.2e+02 Score=29.34 Aligned_cols=106 Identities=14% Similarity=0.130 Sum_probs=64.6
Q ss_pred cccccCccc---ccCCHHHHHHHHHcCC-ChHHHHHHHHhccccccccccccHHHHHHHhhhccCCcEEEeCCChHHHHH
Q 012978 103 RAIVDDNKA---QCLSGEDIDEMRRQGA-TGEEIVEALIANSATFEKKTSFSQEKYKLKKQKKYAPKVLLRRPFARSICE 178 (452)
Q Consensus 103 r~i~Dd~~~---QkLs~eeI~~lK~~g~-sG~eII~~LvenS~tF~~KT~FSqeKYlkkK~kKy~~~~~i~~pt~~~l~e 178 (452)
=.++|...+ |.|--.+..+|.++|. +-+||++.|-+.-. + .++...-.|+.
T Consensus 145 I~ViDS~~~s~g~g~lv~~Aa~l~~~G~~s~eeI~~~l~~~~~-------------------~--~~~~f~v~~L~---- 199 (315)
T 3fys_A 145 VYPFDSEISCLAQGFYALKAAELIKNGASSPEDIIKELEEMKK-------------------T--VRAYFMVDDLA---- 199 (315)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHTT-------------------T--CEEEEECSCTH----
T ss_pred EEEECCchhHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHh-------------------c--cEEEEEECchH----
Confidence 346787543 8899999999999999 99999998866421 1 11222223444
Q ss_pred HHHhcCcccccccchh-HHHHHHHhcCCCC-----CCeEEEEeCCCcH------HHHHHHHHhC-C-CceEEEeec
Q 012978 179 AYFKKNPARIGFLRVD-MLSLLLSMGNVAA-----NSDVLVVDMAGGL------LTGAVAERLG-G-TGYVCNTCI 240 (452)
Q Consensus 179 ~y~~Kdp~Ki~~lR~D-tLa~iL~~anI~~-----g~rvLv~d~~~Gl------ltaAv~ermg-g-~G~v~~~~~ 240 (452)
|+.|. + |.- +-|.+-++.||+| ++++.+++-.-|. +.-.+.++.+ + ...|+-.|.
T Consensus 200 -yL~kG----G--RIs~~~a~ig~lL~IKPIl~~~dG~l~~~~KvRg~kka~~~l~~~~~~~~~~~~~~~v~I~h~ 268 (315)
T 3fys_A 200 -HLQRG----G--RLSSAQAFIGSLLKVKPILHFDNKVIVPFEKIRTRKKAISRIYELLDEDASKGLPMRAAVIHA 268 (315)
T ss_dssp -HHHHH----T--TTHHHHHHHSSCCCSCEEEEEETTEEEEEEECSCHHHHHHHHHHHHHHHHTTCCCEEEEEEES
T ss_pred -HHHhC----C--cchHHHHHHHhhcCcEEEEEEECCEEEEEeeeccHHHHHHHHHHHHHHHhhcCCCcEEEEEec
Confidence 22221 1 222 3467778899987 5588888887775 3344445554 2 224444454
No 399
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=21.82 E-value=74 Score=30.17 Aligned_cols=52 Identities=12% Similarity=0.111 Sum_probs=35.2
Q ss_pred hcCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeCC---hHHHHHHHHHHHhccC
Q 012978 350 ENGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQY---LQPLATCMHSLQVRKM 404 (452)
Q Consensus 350 ~~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp~---~epL~e~~~~L~~~~~ 404 (452)
..+.|.++|++| |....+.+...|+.+.++++=-|. .+...++....++.+.
T Consensus 63 ~~~~D~V~i~tp---~~~h~~~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~ 117 (319)
T 1tlt_A 63 AASCDAVFVHSS---TASHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKL 117 (319)
T ss_dssp HTTCSEEEECSC---TTHHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTC
T ss_pred hcCCCEEEEeCC---chhHHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Confidence 457999999986 344566666778888887776563 4555666666665543
No 400
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=21.72 E-value=2.6e+02 Score=24.16 Aligned_cols=38 Identities=13% Similarity=0.275 Sum_probs=29.0
Q ss_pred CcceEEEeC--CCCChHHHHHhHHhc---ccCCCcEEEEeCCh
Q 012978 352 GFSSMIVVA--PELDPWSFVKDLLPL---LSYSAPFAIYHQYL 389 (452)
Q Consensus 352 ~~D~liia~--~~~dP~~il~~ll~~---L~pS~p~VVYsp~~ 389 (452)
.+|.+|++. |..+-++++..+... ..+.-|+++.+.+.
T Consensus 119 ~~dlillD~~lp~~~G~el~~~lr~~~~~~~~~~piI~ls~~~ 161 (206)
T 3mm4_A 119 PFDYIFMDCQMPEMDGYEATREIRKVEKSYGVRTPIIAVSGHD 161 (206)
T ss_dssp SCSEEEEESCCSSSCHHHHHHHHHHHHHTTTCCCCEEEEESSC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhhhhhcCCCCcEEEEECCC
Confidence 799999986 334567887777654 46788999999986
No 401
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=21.63 E-value=2.1e+02 Score=22.53 Aligned_cols=46 Identities=7% Similarity=-0.013 Sum_probs=33.1
Q ss_pred HHHHHhhh-cCcceEEEeCC--C-CChHHHHHhHHhcccCCCcEEEEeCChH
Q 012978 343 ETLKLWKE-NGFSSMIVVAP--E-LDPWSFVKDLLPLLSYSAPFAIYHQYLQ 390 (452)
Q Consensus 343 ~~~~~~~~-~~~D~liia~~--~-~dP~~il~~ll~~L~pS~p~VVYsp~~e 390 (452)
++++.+.+ ..+|.+|++.. . .+.++++..+... |..|+++++.+.+
T Consensus 40 ~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~--~~~~ii~ls~~~~ 89 (140)
T 3h5i_A 40 AAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQI--SELPVVFLTAHTE 89 (140)
T ss_dssp HHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHH--CCCCEEEEESSSS
T ss_pred HHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhC--CCCCEEEEECCCC
Confidence 44555555 57999999863 1 4567888888764 7889999998654
No 402
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=21.56 E-value=2.3e+02 Score=21.21 Aligned_cols=47 Identities=13% Similarity=0.194 Sum_probs=32.3
Q ss_pred HHHHHhhhcCcceEEEeCC--CCChHHHHHhHHhcccCCCcEEEEeCChH
Q 012978 343 ETLKLWKENGFSSMIVVAP--ELDPWSFVKDLLPLLSYSAPFAIYHQYLQ 390 (452)
Q Consensus 343 ~~~~~~~~~~~D~liia~~--~~dP~~il~~ll~~L~pS~p~VVYsp~~e 390 (452)
++++.+....+|.+|++.. ..+-.+++..+... .|..|+++.+.+.+
T Consensus 36 ~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~-~~~~~ii~~s~~~~ 84 (116)
T 3a10_A 36 EALKKFFSGNYDLVILDIEMPGISGLEVAGEIRKK-KKDAKIILLTAYSH 84 (116)
T ss_dssp HHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHH-CTTCCEEEEESCGG
T ss_pred HHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHcc-CCCCeEEEEECCcc
Confidence 4455566678998988863 23446667766553 47789999998755
No 403
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=21.52 E-value=2.4e+02 Score=22.82 Aligned_cols=49 Identities=10% Similarity=0.261 Sum_probs=34.5
Q ss_pred HHHHHHhhhc--CcceEEEeC--CCCChHHHHHhHHhcccCCCcEEEEeCChHH
Q 012978 342 QETLKLWKEN--GFSSMIVVA--PELDPWSFVKDLLPLLSYSAPFAIYHQYLQP 391 (452)
Q Consensus 342 ~~~~~~~~~~--~~D~liia~--~~~dP~~il~~ll~~L~pS~p~VVYsp~~ep 391 (452)
.++++.+.+. .+|.+|++. +..+-++++..+... .+..|+++++.+...
T Consensus 71 ~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~-~~~~~ii~ls~~~~~ 123 (157)
T 3hzh_A 71 EEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEF-DKNARVIMISALGKE 123 (157)
T ss_dssp HHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHH-CTTCCEEEEESCCCH
T ss_pred HHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhh-CCCCcEEEEeccCcH
Confidence 4556666666 789888885 234557777777653 478899999988544
No 404
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=21.49 E-value=1.2e+02 Score=29.12 Aligned_cols=43 Identities=19% Similarity=-0.054 Sum_probs=33.8
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEee
Q 012978 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTC 239 (452)
Q Consensus 196 La~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~ 239 (452)
+..++...++.++.+||.++.+.|.++.+++++. +..+++.+.
T Consensus 171 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D 213 (374)
T 1qzz_A 171 YEAPADAYDWSAVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVE 213 (374)
T ss_dssp THHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHC-TTCEEEEEE
T ss_pred HHHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHC-CCCEEEEEe
Confidence 3456677788899999999999999999999986 334565554
No 405
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=21.36 E-value=1.1e+02 Score=28.90 Aligned_cols=48 Identities=6% Similarity=-0.029 Sum_probs=29.8
Q ss_pred cCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeCC---hHHHHHHHHHHHh
Q 012978 351 NGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQY---LQPLATCMHSLQV 401 (452)
Q Consensus 351 ~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp~---~epL~e~~~~L~~ 401 (452)
.++|.++|++| |....+.+..+|+.+.++++-.|. .+...++....++
T Consensus 61 ~~~D~V~i~tp---~~~h~~~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~ 111 (332)
T 2glx_A 61 PDVDAVYVSTT---NELHREQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAARE 111 (332)
T ss_dssp TTCCEEEECSC---GGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCC---hhHhHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHH
Confidence 46899999886 444455666677777777765553 3444445544443
No 406
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=21.29 E-value=2.3e+02 Score=22.29 Aligned_cols=49 Identities=18% Similarity=0.224 Sum_probs=35.0
Q ss_pred HHHHHhhhcCcceEEEeC--CCCChHHHHHhHHhc-ccCCCcEEEEeCChHH
Q 012978 343 ETLKLWKENGFSSMIVVA--PELDPWSFVKDLLPL-LSYSAPFAIYHQYLQP 391 (452)
Q Consensus 343 ~~~~~~~~~~~D~liia~--~~~dP~~il~~ll~~-L~pS~p~VVYsp~~ep 391 (452)
++++.+.+..+|.+|++. |..+-++++..+... ..+.-|+++.+.+.++
T Consensus 39 ~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~~~ 90 (136)
T 3t6k_A 39 EALQQIYKNLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQGDI 90 (136)
T ss_dssp HHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTTCH
T ss_pred HHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCCCH
Confidence 455666678899999986 234557888877654 3567899999987654
No 407
>3c8o_A Regulator of ribonuclease activity A; RRAA, PAO1, RNAse E regulater, hydrolase regulator; HET: PGE PG4; 1.90A {Pseudomonas aeruginosa}
Probab=21.29 E-value=1.7e+02 Score=25.49 Aligned_cols=47 Identities=32% Similarity=0.499 Sum_probs=32.7
Q ss_pred CCCCeEEEEeCCC-------cHHHHHHHHHhCCCceEEEeecCCCCCchhhhhhcCCC
Q 012978 206 AANSDVLVVDMAG-------GLLTGAVAERLGGTGYVCNTCIGDSLYPMDIVRIFNFS 256 (452)
Q Consensus 206 ~~g~rvLv~d~~~-------GlltaAv~ermgg~G~v~~~~~~~~~~~~~~~~~~nf~ 256 (452)
.+-+.|||+|.++ |=+.++.|...|-.|.|+.-..+| ++.+..++||
T Consensus 55 ~~~G~VlVvd~~g~~~~a~~G~~la~~a~~~G~~GiVidG~vRD----~~~l~~~~~p 108 (162)
T 3c8o_A 55 DGKGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGIVVYGCIRD----VDVIAQTDLG 108 (162)
T ss_dssp CCBTEEEEEECTTCSSSBSCCHHHHHHHHHTTBCEEEEEEEECC----HHHHTTSSSE
T ss_pred cCCCCEEEEECCCCCCccchHHHHHHHHHHCCCeEEEecCCCCC----HHHHhcCCCc
Confidence 3457999998632 555666667779999999887765 3455666665
No 408
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=21.17 E-value=84 Score=30.27 Aligned_cols=42 Identities=17% Similarity=0.098 Sum_probs=35.1
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCcHHHHHHHHHhCCCceEEEeec
Q 012978 196 LSLLLSMGNVAANSDVLVVDMAGGLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 196 La~iL~~anI~~g~rvLv~d~~~GlltaAv~ermgg~G~v~~~~~ 240 (452)
+-.++...++++|+.||-+.-|.|--|.+++++ .|+|+.+..
T Consensus 11 l~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~ 52 (285)
T 1wg8_A 11 YQEALDLLAVRPGGVYVDATLGGAGHARGILER---GGRVIGLDQ 52 (285)
T ss_dssp HHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEES
T ss_pred HHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeC
Confidence 556677778999998877777889999999998 579999975
No 409
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=21.05 E-value=2.2e+02 Score=24.60 Aligned_cols=47 Identities=15% Similarity=0.247 Sum_probs=32.2
Q ss_pred HHHHHhhhcCcceEEEeCC--CCChHHHHHhHHhcccCCCcEEEEeCChH
Q 012978 343 ETLKLWKENGFSSMIVVAP--ELDPWSFVKDLLPLLSYSAPFAIYHQYLQ 390 (452)
Q Consensus 343 ~~~~~~~~~~~D~liia~~--~~dP~~il~~ll~~L~pS~p~VVYsp~~e 390 (452)
++++.+....+|.+|++.. ..+-++++..+... .|..|+++++.+..
T Consensus 37 ~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~lr~~-~~~~~ii~ls~~~~ 85 (225)
T 1kgs_A 37 EGMYMALNEPFDVVILDIMLPVHDGWEILKSMRES-GVNTPVLMLTALSD 85 (225)
T ss_dssp HHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHT-TCCCCEEEEESSCH
T ss_pred HHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhc-CCCCCEEEEeCCCC
Confidence 4455566678998888862 23556777776654 47888999887754
No 410
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=21.02 E-value=1.2e+02 Score=28.84 Aligned_cols=37 Identities=19% Similarity=0.241 Sum_probs=28.6
Q ss_pred hcCCCCCC-eEEEEeCCC--cHHHHHHHHHhCCCceEEEeec
Q 012978 202 MGNVAANS-DVLVVDMAG--GLLTGAVAERLGGTGYVCNTCI 240 (452)
Q Consensus 202 ~anI~~g~-rvLv~d~~~--GlltaAv~ermgg~G~v~~~~~ 240 (452)
.+++++|. +|||.+.++ |++++.+|..+|. +|+....
T Consensus 144 ~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga--~vi~~~~ 183 (330)
T 1tt7_A 144 QNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY--DVVASTG 183 (330)
T ss_dssp HTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC--CEEEEES
T ss_pred hcCcCCCCceEEEECCCCHHHHHHHHHHHHCCC--EEEEEeC
Confidence 47899996 999999644 7888888888875 5666654
No 411
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=21.01 E-value=1.4e+02 Score=28.47 Aligned_cols=48 Identities=17% Similarity=0.153 Sum_probs=37.6
Q ss_pred cchhHHHHHHHhcCCCCCCeEEEEeC-------CCc--HHHHHHHHHhCCCceEEEe
Q 012978 191 LRVDMLSLLLSMGNVAANSDVLVVDM-------AGG--LLTGAVAERLGGTGYVCNT 238 (452)
Q Consensus 191 lR~DtLa~iL~~anI~~g~rvLv~d~-------~~G--lltaAv~ermgg~G~v~~~ 238 (452)
.-.+.|.+-|.-.+|++|+.+||=-+ ++| .|..|+.+.+|.+|+|+-.
T Consensus 13 ~T~~~L~~~L~~LGI~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLvmP 69 (273)
T 2nyg_A 13 RTKQSITEDLKALGLKKGMTVLVHSSLSSIGWVNGGAVAVIQALIDVVTEEGTIVMP 69 (273)
T ss_dssp BCHHHHHHHHHHHTCCTTCEEEEEECSGGGCCBTTHHHHHHHHHHHHHTTTSEEEEE
T ss_pred cCHHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEEEe
Confidence 44566888899999999999999644 333 3567888999999998874
No 412
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=20.91 E-value=70 Score=21.50 Aligned_cols=18 Identities=17% Similarity=0.551 Sum_probs=15.1
Q ss_pred HHHHHHHHHcCCChHHHH
Q 012978 116 GEDIDEMRRQGATGEEIV 133 (452)
Q Consensus 116 ~eeI~~lK~~g~sG~eII 133 (452)
..|++.||++|.+.+|+.
T Consensus 6 kselqalkkegfspeela 23 (48)
T 1g6u_A 6 KSELQALKKEGFSPEELA 23 (48)
T ss_dssp HHHHHHHHHTTCSHHHHH
T ss_pred HHHHHHHHHcCCCHHHHH
Confidence 357889999999998875
No 413
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=20.80 E-value=1.3e+02 Score=29.47 Aligned_cols=52 Identities=2% Similarity=0.056 Sum_probs=32.3
Q ss_pred HhhhcCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeC---ChHHHHHHHHHHHh
Q 012978 347 LWKENGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQ---YLQPLATCMHSLQV 401 (452)
Q Consensus 347 ~~~~~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp---~~epL~e~~~~L~~ 401 (452)
.+...++|.++|++| |..-.+.+..+|.-+.++++=-| ..+...++....++
T Consensus 59 ll~~~~vD~V~i~tp---~~~H~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~ 113 (387)
T 3moi_A 59 MMQHVQMDAVYIASP---HQFHCEHVVQASEQGLHIIVEKPLTLSRDEADRMIEAVER 113 (387)
T ss_dssp HHHHSCCSEEEECSC---GGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHH
T ss_pred HHcCCCCCEEEEcCC---cHHHHHHHHHHHHCCCceeeeCCccCCHHHHHHHHHHHHH
Confidence 344457899999886 44556666677777777666333 44555555555544
No 414
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=20.65 E-value=1.2e+02 Score=29.12 Aligned_cols=51 Identities=4% Similarity=-0.076 Sum_probs=30.8
Q ss_pred hhhcCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeC---ChHHHHHHHHHHHh
Q 012978 348 WKENGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQ---YLQPLATCMHSLQV 401 (452)
Q Consensus 348 ~~~~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp---~~epL~e~~~~L~~ 401 (452)
+...+.|.++|++| |..-.+.+...|.-+.++++=-| ..+...++....++
T Consensus 71 l~~~~~D~V~i~tp---~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~ 124 (354)
T 3q2i_A 71 LAQTDADIVILTTP---SGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADK 124 (354)
T ss_dssp HHHCCCSEEEECSC---GGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHH
T ss_pred hcCCCCCEEEECCC---cHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHH
Confidence 33467899998886 44455666666777766666434 44455555544443
No 415
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=20.53 E-value=2.3e+02 Score=21.69 Aligned_cols=47 Identities=9% Similarity=0.176 Sum_probs=32.1
Q ss_pred HHHHHhhhc-CcceEEEeCCC---CChHHHHHhHHhcccCCCcEEEEeCChH
Q 012978 343 ETLKLWKEN-GFSSMIVVAPE---LDPWSFVKDLLPLLSYSAPFAIYHQYLQ 390 (452)
Q Consensus 343 ~~~~~~~~~-~~D~liia~~~---~dP~~il~~ll~~L~pS~p~VVYsp~~e 390 (452)
++++.+.+. .+|.+|++... .+-++++..+... .+..|+++++...+
T Consensus 40 ~a~~~l~~~~~~dlvi~d~~l~~~~~g~~~~~~l~~~-~~~~~ii~~s~~~~ 90 (132)
T 2rdm_A 40 KAIEMLKSGAAIDGVVTDIRFCQPPDGWQVARVAREI-DPNMPIVYISGHAA 90 (132)
T ss_dssp HHHHHHHTTCCCCEEEEESCCSSSSCHHHHHHHHHHH-CTTCCEEEEESSCC
T ss_pred HHHHHHHcCCCCCEEEEeeeCCCCCCHHHHHHHHHhc-CCCCCEEEEeCCcc
Confidence 445556665 79999998631 3446667766654 57889999988754
No 416
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=20.49 E-value=56 Score=31.25 Aligned_cols=41 Identities=5% Similarity=-0.091 Sum_probs=33.8
Q ss_pred CcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeCChHHH
Q 012978 352 GFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQYLQPL 392 (452)
Q Consensus 352 ~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp~~epL 392 (452)
++|-+|+++|.++-.++++.+.|+|.++.++|....=++..
T Consensus 71 ~~DlVilavK~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~~~ 111 (320)
T 3i83_A 71 KPDCTLLCIKVVEGADRVGLLRDAVAPDTGIVLISNGIDIE 111 (320)
T ss_dssp CCSEEEECCCCCTTCCHHHHHTTSCCTTCEEEEECSSSSCS
T ss_pred CCCEEEEecCCCChHHHHHHHHhhcCCCCEEEEeCCCCChH
Confidence 78999999988777789999999999988888777665543
No 417
>2g7z_A Conserved hypothetical protein SPY1493; long-fatty acid binding protein, lipid binding protein, PSI, structural genomics; HET: MSE HXA; 2.05A {Streptococcus pyogenes}
Probab=20.49 E-value=79 Score=30.12 Aligned_cols=88 Identities=23% Similarity=0.218 Sum_probs=51.7
Q ss_pred ccccccCcc---cccCCHHHHHHHHHcCCChHHHHHHHHhccccccccccccHHHHHHHhhhccCCcEEEeCCChHHHHH
Q 012978 102 NRAIVDDNK---AQCLSGEDIDEMRRQGATGEEIVEALIANSATFEKKTSFSQEKYKLKKQKKYAPKVLLRRPFARSICE 178 (452)
Q Consensus 102 Nr~i~Dd~~---~QkLs~eeI~~lK~~g~sG~eII~~LvenS~tF~~KT~FSqeKYlkkK~kKy~~~~~i~~pt~~~l~e 178 (452)
+=.++|... .|.+--.+..+|.++|.+-+||++.|-+.. .+--.+|.+ .|+.
T Consensus 114 ~I~ViDS~~~s~g~g~~v~~A~~l~~~G~s~~eI~~~l~~~~-------------------~~~~~~f~v--~~L~---- 168 (282)
T 2g7z_A 114 PVTVLDSGFTDQAMKFQVVEAAKMAKAGASLNEILAAVQAIK-------------------SKTELYIGV--STLE---- 168 (282)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHH-------------------HTEEEEEEE--SCSH----
T ss_pred eEEEECCCchhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH-------------------hhcEEEEEE--CChH----
Confidence 455788754 388999999999999999999999886631 111112222 3333
Q ss_pred HHHhcCcccccccchhHHHHHHHhcCCCC-----CCeEEEEeCCCcH
Q 012978 179 AYFKKNPARIGFLRVDMLSLLLSMGNVAA-----NSDVLVVDMAGGL 220 (452)
Q Consensus 179 ~y~~Kdp~Ki~~lR~DtLa~iL~~anI~~-----g~rvLv~d~~~Gl 220 (452)
|+.|. .||.. +-|.+-++.||+| ++++.+++-+.|.
T Consensus 169 -~L~kG-GRis~----~~a~ig~lL~IKPil~~~~G~l~~~~K~Rg~ 209 (282)
T 2g7z_A 169 -NLVKG-GRIGR----VTGVLSSLLNVKVVMALKNDELKTLVKGRGN 209 (282)
T ss_dssp -HHHHH-SGGGG----EEC-----CCCEEEEEEETTEEEEEEEESST
T ss_pred -HHHhC-CeecH----HHHHHHhhhCcEEEEEEECCEEEEeeccCCH
Confidence 22221 11111 1367777789987 6788888887774
No 418
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=20.30 E-value=89 Score=29.83 Aligned_cols=43 Identities=16% Similarity=0.115 Sum_probs=34.9
Q ss_pred cCcceEEEeCCCCChHHHHHhHHhcccCCCcEEEEeCChHHHH
Q 012978 351 NGFSSMIVVAPELDPWSFVKDLLPLLSYSAPFAIYHQYLQPLA 393 (452)
Q Consensus 351 ~~~D~liia~~~~dP~~il~~ll~~L~pS~p~VVYsp~~epL~ 393 (452)
.++|-+|+++|.++-.+++..+.|+|.++..+|..+.-++...
T Consensus 85 ~~~D~vilavk~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~ 127 (318)
T 3hwr_A 85 QGADLVLFCVKSTDTQSAALAMKPALAKSALVLSLQNGVENAD 127 (318)
T ss_dssp TTCSEEEECCCGGGHHHHHHHHTTTSCTTCEEEEECSSSSHHH
T ss_pred CCCCEEEEEcccccHHHHHHHHHHhcCCCCEEEEeCCCCCcHH
Confidence 4789999999877667888999999999888887777776643
No 419
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=20.13 E-value=1.7e+02 Score=24.65 Aligned_cols=48 Identities=23% Similarity=0.207 Sum_probs=34.9
Q ss_pred HHHHHhhhcCcceEEEeC--CCCChHHHHHhHHhcccCCCcEEEEeCChHH
Q 012978 343 ETLKLWKENGFSSMIVVA--PELDPWSFVKDLLPLLSYSAPFAIYHQYLQP 391 (452)
Q Consensus 343 ~~~~~~~~~~~D~liia~--~~~dP~~il~~ll~~L~pS~p~VVYsp~~ep 391 (452)
++++.+....+|.+|++. |..+-++++..+.. ..|..|+++++.+..+
T Consensus 42 ~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~-~~~~~~ii~lt~~~~~ 91 (184)
T 3rqi_A 42 EALKLAGAEKFEFITVXLHLGNDSGLSLIAPLCD-LQPDARILVLTGYASI 91 (184)
T ss_dssp HHHHHHTTSCCSEEEECSEETTEESHHHHHHHHH-HCTTCEEEEEESSCCH
T ss_pred HHHHHHhhCCCCEEEEeccCCCccHHHHHHHHHh-cCCCCCEEEEeCCCCH
Confidence 455666777899998886 33345788877766 3578899999988654
No 420
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=20.07 E-value=77 Score=25.68 Aligned_cols=39 Identities=13% Similarity=0.035 Sum_probs=27.4
Q ss_pred hHHHHHhHHhcccCCCcEEEEeCChHH--HHHHHHHHHhcc
Q 012978 365 PWSFVKDLLPLLSYSAPFAIYHQYLQP--LATCMHSLQVRK 403 (452)
Q Consensus 365 P~~il~~ll~~L~pS~p~VVYsp~~ep--L~e~~~~L~~~~ 403 (452)
|+.-+...+..|.++.++|+||..-.- -..+...|+..+
T Consensus 57 p~~~l~~~~~~l~~~~~ivvyC~~g~r~~s~~a~~~L~~~G 97 (124)
T 3flh_A 57 PAKDLATRIGELDPAKTYVVYDWTGGTTLGKTALLVLLSAG 97 (124)
T ss_dssp CHHHHHHHGGGSCTTSEEEEECSSSSCSHHHHHHHHHHHHT
T ss_pred CHHHHHHHHhcCCCCCeEEEEeCCCCchHHHHHHHHHHHcC
Confidence 455566667778889999999987554 355666676543
Done!