Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>012979
MEEHLPQPLILEILSRLTDSADLARCRVVSKTLNSLCKEVRSINLVCTLSRYVQSRLPQQ
VTAAPRVTPFKSILENLVRNSRHLESVSIGVDKSLVGISYDDAEDESDDLYLTDVEFVKN
WLPWVCEELKFLSISDCWFQSCWRKSEVLAFISSCCKSLVELEVKNAWLSVDNLNQMPML
TKLTLEFIRLEDEDLDKVNDCFPCLQVLNLVGVGGFRQPKIHLLHLKSCLWTVSNAPLSL
AIYAPNLVKLELRCVKPKSLVLQTPLLHDFCLSLEVANEIRFQEFRNLMNLQLESSSLSS
LINTFPFGKTIKKLKVELLKPGEPIGMKNLNLGVLFDVFPNLSSLTLGPRAWSAVQSNFD
KGRLEIRTEMKVLKEIIARLVVDDISVTRSFIFAIMNICSNLSDMALLIHREEDSITASN
LISSCTVDHPRVRWRWGMWKEGTEDTWVTDGI

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  012979
        (452 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2118304 - symbol:AT4G29420 "AT4G29420" species...  1191  4.6e-121  1


>TAIR|locus:2118304 [details] [associations]
            symbol:AT4G29420 "AT4G29420" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0006914 "autophagy" evidence=RCA]
            InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181 SMART:SM00256
            EMBL:CP002687 GenomeReviews:CT486007_GR SUPFAM:SSF81383
            EMBL:AL161575 EMBL:AK117609 EMBL:BT026133 IPI:IPI00523796
            PIR:C85343 RefSeq:NP_194671.1 UniGene:At.31925
            ProteinModelPortal:Q9M0E1 SMR:Q9M0E1 EnsemblPlants:AT4G29420.1
            GeneID:829063 KEGG:ath:AT4G29420 TAIR:At4g29420 eggNOG:NOG274125
            HOGENOM:HOG000083063 InParanoid:Q9M0E1 OMA:KNAWLSV PhylomeDB:Q9M0E1
            ProtClustDB:CLSN2685356 Genevestigator:Q9M0E1 Uniprot:Q9M0E1
        Length = 446

 Score = 1191 (424.3 bits), Expect = 4.6e-121, P = 4.6e-121
 Identities = 244/453 (53%), Positives = 317/453 (69%)

Query:     1 MEEHLPQPLILEILSRLTDSADLARCRVVSKTLNSLCKEVRSINLVCTLSRYVQSRLPQQ 60
             M+E LP  L ++ILSR+ DS  LARCRV SKTLNSL +EVR++NL+CT SRY++SR    
Sbjct:     1 MDE-LPPELWIKILSRINDSESLARCRVASKTLNSLSREVRAVNLICTWSRYLKSR---S 56

Query:    61 VTAAPRVTPFKSILENLVRNSRHLESVSIGVDKSLVGISYDDA-EDESDDLYLTDVEFVK 119
             +     VTPFK+I  +L+ NS  + S+S+GVDK+L G+S+DD  E++S DLYLTDVEFVK
Sbjct:    57 IVV---VTPFKTIFRSLIENSSKIRSISVGVDKALKGMSFDDFNEEDSKDLYLTDVEFVK 113

Query:   120 NWLPWVCEELKFLSISDCWFQSCWRKSEVLAFISSCCKSLVELEVKNAWLSVDNLNQMPM 179
              WLP V E+L+ LSISD W QSCWRKS++LA ISS C  LV+LEVKNAWLSV  L +MP 
Sbjct:   114 EWLPRVREDLENLSISDFWIQSCWRKSDILALISSNCSKLVKLEVKNAWLSVVGLTEMPN 173

Query:   180 LTKLTLEFIRLEDEDLDKVNDCFPCLQVLNLVGVGGFRQPKIHLLHLKSCLWTVSNAPLS 239
             L  LTLEFIRL+DE+L+KVNDCFP LQ LNL+GVGG ++P+IH LHLKSC WTVSNAPLS
Sbjct:   174 LRYLTLEFIRLDDENLEKVNDCFPFLQELNLIGVGGLKEPRIHFLHLKSCHWTVSNAPLS 233

Query:   240 LAIYAPNLVKLELRCVKPKSLVLQTPLLHDFCLSLEVANEIRFQEFRNXXXXXXXXXXXX 299
             LAI APNL++L+L+C KPKSL+++TP L    LS+E A  + F EF++            
Sbjct:   234 LAIVAPNLLELKLKCNKPKSLLVETPKLVQCHLSVEDAEGVSFGEFQDLKTLELVSPDMY 293

Query:   300 XXINTFPFGKTIKKLKVELLKPGEPIGMKNLNLGVLFDVFPNLSSLTLGPRAWSAVQSNF 359
               I+   FG  IKKL V+ +K  E      L L  +   FP ++SL+L PR WS ++++F
Sbjct:   294 RLISNISFGNKIKKLAVDSVKSIEQSERLELGLATILKAFPGITSLSLSPRTWSDIETHF 353

Query:   360 D-KGRLEIRTEMKVLKEIIARLVVDD---ISVTRSFIFAIMNICSNLSDMALLIHREEDS 415
               +G L        LK+I AR+ + D   +  T SFI +I+N    L+DM L+IH+++D 
Sbjct:   354 QSQGGLGDMKGTDSLKQITARVQMSDHTNVHQTVSFIRSIVNKYRGLTDMRLMIHQDKDP 413

Query:   416 ITASNLISSCTVDHPRVRWRWGMWKEGTEDTWV 448
                SNLIS+C + +PRVRW+WGMW EG ED WV
Sbjct:   414 RVRSNLISTCMMSNPRVRWKWGMWAEGGEDMWV 446


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.137   0.418    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      452       438   0.00088  118 3  11 22  0.50    33
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  624 (66 KB)
  Total size of DFA:  288 KB (2149 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  37.50u 0.13s 37.63t   Elapsed:  00:00:02
  Total cpu time:  37.50u 0.13s 37.63t   Elapsed:  00:00:02
  Start:  Mon May 20 15:32:54 2013   End:  Mon May 20 15:32:56 2013

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