Query 012980
Match_columns 452
No_of_seqs 122 out of 1175
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 08:18:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012980.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012980hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR02946 acyl_WS_DGAT acyltra 100.0 3.8E-50 8.1E-55 409.9 45.3 410 9-442 1-446 (446)
2 PF03007 WES_acyltransf: Wax e 100.0 3.3E-33 7.1E-38 263.5 21.7 225 9-239 1-263 (263)
3 PF06974 DUF1298: Protein of u 100.0 3.4E-27 7.3E-32 203.7 18.5 150 290-441 3-153 (153)
4 COG4908 Uncharacterized protei 99.9 2.5E-23 5.4E-28 196.3 31.4 401 5-439 4-437 (439)
5 PF07247 AATase: Alcohol acety 99.9 5.9E-22 1.3E-26 204.1 33.0 394 8-424 1-466 (480)
6 PRK09294 acyltransferase PapA5 99.9 8.4E-22 1.8E-26 199.3 30.0 386 3-440 4-410 (416)
7 PRK12467 peptide synthase; Pro 99.9 9.5E-20 2.1E-24 225.4 29.9 392 6-440 49-478 (3956)
8 PRK12467 peptide synthase; Pro 99.8 3.2E-19 6.8E-24 220.8 29.9 392 5-440 1115-1539(3956)
9 PRK12316 peptide synthase; Pro 99.8 1.6E-18 3.5E-23 218.0 29.0 392 6-440 2602-3022(5163)
10 PRK12316 peptide synthase; Pro 99.8 3.8E-18 8.2E-23 214.7 30.6 395 5-440 48-476 (5163)
11 PRK10252 entF enterobactin syn 99.8 2.6E-17 5.6E-22 189.3 32.1 388 5-439 6-424 (1296)
12 PRK05691 peptide synthase; Val 99.8 1.3E-17 2.9E-22 208.2 28.6 389 6-440 1728-2153(4334)
13 PRK05691 peptide synthase; Val 99.8 1.4E-17 3.1E-22 207.8 25.9 395 5-440 3256-3685(4334)
14 PF00668 Condensation: Condens 99.8 2E-17 4.4E-22 159.1 20.4 265 5-305 3-298 (301)
15 PLN02481 Omega-hydroxypalmitat 98.5 1.3E-05 2.8E-10 81.7 20.0 263 5-305 31-320 (436)
16 PF02458 Transferase: Transfer 98.4 5.9E-06 1.3E-10 84.2 15.7 260 6-305 21-309 (432)
17 PLN02663 hydroxycinnamoyl-CoA: 98.4 3.9E-05 8.5E-10 78.1 21.4 263 4-305 19-307 (431)
18 PLN00140 alcohol acetyltransfe 98.2 0.00017 3.8E-09 73.6 20.3 257 8-305 25-305 (444)
19 PLN03157 spermidine hydroxycin 98.2 0.00073 1.6E-08 69.2 24.8 265 5-305 20-315 (447)
20 COG1020 EntF Non-ribosomal pep 96.3 0.12 2.7E-06 55.3 16.3 94 221-337 7-103 (642)
21 TIGR03443 alpha_am_amid L-amin 95.8 0.68 1.5E-05 54.6 20.0 156 228-439 42-201 (1389)
22 PF00198 2-oxoacid_dh: 2-oxoac 93.3 5.2 0.00011 36.9 15.5 61 213-273 31-103 (231)
23 PRK05704 dihydrolipoamide succ 92.4 7 0.00015 39.4 16.2 40 214-253 206-254 (407)
24 PF07428 Tri3: 15-O-acetyltran 92.2 6.1 0.00013 38.1 14.2 115 212-337 269-393 (413)
25 TIGR01347 sucB 2-oxoglutarate 91.5 8.5 0.00018 38.7 15.5 39 214-253 202-250 (403)
26 TIGR01349 PDHac_trf_mito pyruv 91.3 6.3 0.00014 40.1 14.5 41 214-254 235-282 (435)
27 PRK11857 dihydrolipoamide acet 90.6 12 0.00026 36.1 15.1 23 232-254 131-153 (306)
28 PLN02744 dihydrolipoyllysine-r 90.5 16 0.00034 38.2 16.6 41 214-254 337-386 (539)
29 PTZ00144 dihydrolipoamide succ 90.2 17 0.00037 36.7 16.2 40 214-254 217-266 (418)
30 PLN02528 2-oxoisovalerate dehy 90.1 17 0.00036 36.8 16.3 40 214-253 212-259 (416)
31 PRK11856 branched-chain alpha- 89.9 13 0.00029 37.5 15.5 40 214-253 216-259 (411)
32 PRK14843 dihydrolipoamide acet 89.6 15 0.00033 36.1 15.0 21 232-252 173-193 (347)
33 PLN02226 2-oxoglutarate dehydr 87.8 21 0.00047 36.4 15.0 40 214-253 262-310 (463)
34 TIGR02927 SucB_Actino 2-oxoglu 87.7 16 0.00034 38.9 14.7 40 214-253 381-429 (590)
35 TIGR01348 PDHac_trf_long pyruv 85.4 44 0.00095 35.2 16.4 40 214-253 346-393 (546)
36 PF13745 HxxPF_rpt: HxxPF-repe 82.7 7.8 0.00017 29.4 7.4 63 358-422 22-84 (91)
37 PF00302 CAT: Chloramphenicol 79.4 1.3 2.7E-05 40.2 2.1 23 119-141 183-205 (206)
38 PRK11854 aceF pyruvate dehydro 75.4 80 0.0017 34.0 14.6 39 214-253 431-480 (633)
39 PRK11855 dihydrolipoamide acet 74.5 1.2E+02 0.0026 32.0 16.7 39 214-253 347-394 (547)
40 PRK13757 chloramphenicol acety 73.4 2.3 5E-05 38.8 2.1 24 119-142 186-209 (219)
41 COG4845 Chloramphenicol O-acet 70.7 3.4 7.3E-05 36.7 2.4 25 119-143 185-209 (219)
42 PRK12270 kgd alpha-ketoglutara 64.3 1.7E+02 0.0037 33.0 13.8 45 232-276 169-220 (1228)
43 KOG0557 Dihydrolipoamide acety 57.0 1.3E+02 0.0027 30.6 10.6 37 213-249 269-311 (470)
44 PF03869 Arc: Arc-like DNA bin 54.1 32 0.00069 23.3 4.3 34 214-248 10-43 (50)
45 PF01402 RHH_1: Ribbon-helix-h 51.0 47 0.001 20.6 4.6 32 215-247 6-37 (39)
46 PF05534 HicB: HicB family; I 44.9 25 0.00054 23.9 2.7 25 217-242 26-50 (51)
47 PHA01513 mnt Mnt 32.3 69 0.0015 24.2 3.5 36 213-249 10-45 (82)
48 PF12651 RHH_3: Ribbon-helix-h 30.8 1.1E+02 0.0025 19.9 4.0 35 215-250 9-43 (44)
49 PF13443 HTH_26: Cro/C1-type H 30.7 27 0.00057 24.4 1.1 22 217-239 37-58 (63)
50 smart00803 TAF TATA box bindin 28.1 1.4E+02 0.003 21.4 4.4 35 218-253 3-38 (65)
51 PRK03762 hypothetical protein; 27.7 2.2E+02 0.0047 22.6 5.8 38 407-444 48-85 (103)
52 PRK14628 hypothetical protein; 24.3 2.6E+02 0.0057 22.8 5.9 33 411-443 66-98 (118)
53 PF15429 DUF4628: Domain of un 22.7 54 0.0012 30.0 1.8 20 218-238 46-65 (273)
54 COG5435 Uncharacterized conser 22.6 2.1E+02 0.0045 24.3 5.0 48 394-441 17-64 (147)
55 PRK11856 branched-chain alpha- 22.0 43 0.00092 33.9 1.1 26 119-144 376-401 (411)
56 PRK14623 hypothetical protein; 21.4 3.2E+02 0.0069 21.8 5.7 32 412-443 49-80 (106)
57 COG3655 Predicted transcriptio 20.6 68 0.0015 23.7 1.6 23 216-239 41-63 (73)
No 1
>TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This bacteria-specific protein family includes a characterized, homodimeric, broad specificity acyltransferase from Acinetobacter sp. strain ADP1, active as wax ester synthase, as acyl coenzyme A:diacylglycerol acyltransferase, and as acyl-CoA:monoacylglycerol acyltransferase.
Probab=100.00 E-value=3.8e-50 Score=409.94 Aligned_cols=410 Identities=28% Similarity=0.413 Sum_probs=307.6
Q ss_pred CChhhhccc--CCC-cceEEEEEEecCCCCChhHHHHHHHhhhcccCCCCceeeeeC--CCCceeeee-cccCcccccee
Q 012980 9 LTPAGRLFL--QPH-MNTIIHCVVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRD--KRGLEHWRE-TSVDIDRHFVE 82 (452)
Q Consensus 9 L~~~d~~~~--~~~-~~~~~~~~~~~~~~ld~~~l~~al~~~~~~~~p~lr~~~~~~--~~g~p~w~~-~~~d~~~hv~~ 82 (452)
|||.|+.|+ +.+ ..+.+.+++.++|++|.+.|++++...+. +||.||++++.. ..+.++|+. +++|+..|+..
T Consensus 1 ls~~D~~~l~~e~~~~~~~~~~~~~l~g~ld~~~l~~al~~~~~-rh~~LR~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 79 (446)
T TIGR02946 1 LSPVDAAFLRLETPTRPMHIGALAVFEGPLSFEALRALLESRLP-LAPRFRQRLREVPLGLGHPYWVEDPDFDLDYHVRR 79 (446)
T ss_pred CCHHHHHHHhccCCCCCceEEEEEEEcCCccHHHHHHHHHHhhc-cCChhhcccccCCCCCCCcEEeeCCCCChHHhhcc
Confidence 789999988 223 33445567788899999999999999999 999999999864 246789988 88888888754
Q ss_pred --e---CChhHHHHHHHhhhcCCCCCCCCCCeEEEEEc----cceEEEEeecccccccccHHHHHHHhcccCCCCCCCCC
Q 012980 83 --V---HDSTSVNDYVAGLSFSSPLSEDKPLWEVHVLA----EHRCAVFRIHHALGDGISLVSMLLAGCRLADDPEALPA 153 (452)
Q Consensus 83 --l---~~~~~l~~~~~~~~~~~pld~~~PlW~~~lv~----~~~~l~~~~HH~l~DG~s~~~l~~~l~~~~~~~~~~~~ 153 (452)
+ +.+++++++++++.++ |||.++|+|++++++ +++.+++++||+++||+|+..++.++++.+.++...+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~-p~dl~~Pl~r~~li~~~~~~~~~l~~~~HH~i~DG~S~~~l~~~l~~~~~~~~~~~~ 158 (446)
T TIGR02946 80 VALPAPGTRRELLELVGRLMST-PLDRSRPLWEMHLIEGLAGGRFAVLTKVHHALADGVAGLRLLARLLDDDPDPPPLPA 158 (446)
T ss_pred ccCCCCCCHHHHHHHHHHHhcC-CCCCCCCCeEEEEEeccCCCeEEEEEEeehhhhchHHHHHHHHHHcCCCCCCCCCCC
Confidence 2 3467899999999999 999999999999998 57899999999999999999999999987643332211
Q ss_pred C-CCCCCCCC---CCccchHHH-HHHHHHHH---HHH-HHHHHH-------HhcccCCCCCcccCCCCCCCCCeEEEEEe
Q 012980 154 V-AGGKRTES---AGKIGSLWG-LLKMVLLS---IVF-VLEFLL-------RALWVSDRKTAISGGAGVELWPRKLATAT 217 (452)
Q Consensus 154 ~-~~~~~~~~---~~~~~~~~~-~~~~~~~~---~~~-~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 217 (452)
. +.++.... .+....+.. ..+..+.. +.. ....+. ..++..+|+++++++.+. .+.+++..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~r~~~~~~ 235 (446)
T TIGR02946 159 PPPPPQPSTRGLLSGALSGLPSALLRRVASTAPGVVRAAGRAVEGVARSARPALPFTAPPTPLNGPISR---KRRFAAQS 235 (446)
T ss_pred CCCCCCCchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCCCCCCCcCCCCCCc---cceEEeec
Confidence 1 11111000 000000000 01101000 000 101000 011223456677766654 67789999
Q ss_pred echHHHHHHHHHccCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCcchhhhhhccCCCCCCCce
Q 012980 218 FSIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTRWGNK 297 (452)
Q Consensus 218 ~~~~~lk~~a~~~~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~~~~~~~~~~~~~~~~~~~gN~ 297 (452)
++++++|++|+++ |+|+||+++||++++|++|+.++++ .+. ..+++++|||+|...+ ...+||.
T Consensus 236 ~~~~~l~~~a~~~-g~T~ndvllaa~~~al~~~~~~~~~--~~~-~~i~~~~pv~~R~~~~------------~~~~~N~ 299 (446)
T TIGR02946 236 LPLADVKAVAKAF-GVTINDVVLAAVAGALRRYLEERGE--LPD-DPLVAMVPVSLRPMED------------DSEGGNQ 299 (446)
T ss_pred cCHHHHHHHHHHh-CCCHHHHHHHHHHHHHHHHHHHcCC--CCC-CceEEEEeeecccccc------------CCCCCCE
Confidence 9999999999999 9999999999999999999988763 233 5799999999998743 2478999
Q ss_pred EEEEEEEccCCCCCCCHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHhHH----HHHHHhcccccceeEEEeccCC
Q 012980 298 FGMLLLPIYYHKGGADPLSYVKRAKKMIDSKKLTLEGHFSYKIGNLVMSWFGAK----VACLLNYRIVCNTTFTISNIVG 373 (452)
Q Consensus 298 ~~~~~~~l~~p~~~~d~~~~l~~v~~~~~~~k~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~vSNv~g 373 (452)
++++.+.+ |.+..|+.++|++++++|+..|++......+.+..+ ...+|.. .+...........++++||+||
T Consensus 300 ~~~~~~~l--~~~~~~~~~~l~~v~~~~~~~k~~~~~~~~~~~~~~-~~~lP~~~~~~~~~~~~~~~~~~~~~~~SNvpg 376 (446)
T TIGR02946 300 VSAVLVPL--PTGIADPVERLSAIHASMTRAKESGQAMGANALLAL-SGLLPAPLLRLALRALARKAQRLFNLVISNVPG 376 (446)
T ss_pred EEEEEecC--CCCCCCHHHHHHHHHHHHHHHHHhHhhcCHHHHHHH-HHhccHHHHHHHHHHhhccCCCceeEEEeCCCC
Confidence 99999999 888888999999999999999999876654443332 2223321 1221222211235889999999
Q ss_pred CCcceeecCCeeeEEeecc-CCCCceeEEEEEeeCCeEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHH
Q 012980 374 PTEKITLADNPVAYLRANT-SSLPHALTMHMMSYAGRADMQILVAKDIIPDPELLAKCFEDSLLEMKEAA 442 (452)
Q Consensus 374 ~~~~l~~~g~~v~~~~~~~-~~~~~~l~v~v~s~~g~l~l~i~~d~~~~~~~~~l~~~~~~~l~el~~~~ 442 (452)
+..+++++|.+++.+++++ ...+.+++++++||+|++++++++|++++||+++|.++|+++|.||.++|
T Consensus 377 ~~~~~~~~g~~v~~~~~~~p~~~~~~l~~~~~sy~g~l~~~~~~d~~~~~d~~~l~~~~~~~l~~l~~~~ 446 (446)
T TIGR02946 377 PREPLYLAGAKLDELYPLSPLLDGQGLNITVTSYNGQLDFGLLADRDAVPDPQELADALEAALEELEAAA 446 (446)
T ss_pred CCcccEecCeeEEEeeccccccCCCeEEEEEEecCCeEEEEEeechhhCCCHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999985 56788999999999999999999999999999999999999999997654
No 2
>PF03007 WES_acyltransf: Wax ester synthase-like Acyl-CoA acyltransferase domain; InterPro: IPR004255 This entry represents the N terminus (approximately 170 residues) of a number of hypothetical plant proteins. O-acyltransferase WSD1 is a bifunctional wax ester synthase/diacylglycerol acyltransferase, which is involved in cuticular wax biosynthesis [].; GO: 0004144 diacylglycerol O-acyltransferase activity
Probab=100.00 E-value=3.3e-33 Score=263.53 Aligned_cols=225 Identities=31% Similarity=0.486 Sum_probs=165.6
Q ss_pred CChhhhccc-----CCCcceEEEEEEecC--C--CCChhHHHHHHHhhhcccCCCCceeeeeC--CCCceeeee-cccCc
Q 012980 9 LTPAGRLFL-----QPHMNTIIHCVVGFE--R--PIDVPKSKDAVMSSIMVRHPRFRSVLVRD--KRGLEHWRE-TSVDI 76 (452)
Q Consensus 9 L~~~d~~~~-----~~~~~~~~~~~~~~~--~--~ld~~~l~~al~~~~~~~~p~lr~~~~~~--~~g~p~w~~-~~~d~ 76 (452)
||++|+.|+ ..++|++.+.+++.. + +.+.+.|++.++.++. .+|+||+|++.. ..+.|+|++ ++||+
T Consensus 1 Ls~~Da~fl~~e~~~~pmhv~~~~~~~~~~~~~~~~~~~~l~~~~~~r~~-~~p~fr~rv~~~~~~~~~p~W~~d~~fDl 79 (263)
T PF03007_consen 1 LSPLDAAFLYMETPSNPMHVGALAIFDPPTDGAPPLDVERLRARLEARLA-RHPRFRQRVVRVPFGLGRPRWVEDPDFDL 79 (263)
T ss_pred CChHHHHHHhcCCCCCCceEEEEEEEEcCCCCCCcchHHHHHHHHHHhhc-cCCccccceecCCCCCCCEEEEECCCCCh
Confidence 789999988 255778777777765 2 3479999999999999 999999999874 568999999 89999
Q ss_pred ccccee--e---CChhHHHHHHHhhhcCCCCCCCCCCeEEEEEc----cceEEEEeecccccccccHHHHHHHhcccCCC
Q 012980 77 DRHFVE--V---HDSTSVNDYVAGLSFSSPLSEDKPLWEVHVLA----EHRCAVFRIHHALGDGISLVSMLLAGCRLADD 147 (452)
Q Consensus 77 ~~hv~~--l---~~~~~l~~~~~~~~~~~pld~~~PlW~~~lv~----~~~~l~~~~HH~l~DG~s~~~l~~~l~~~~~~ 147 (452)
++||+. + ++++++++++++++++ |||+++||||+|||+ |+++|++|+|||++||++++.++..+++...+
T Consensus 80 ~~Hv~~~~l~~pg~~~~l~~~v~~l~~~-pLd~~rPlWe~~li~g~~~g~~Al~~k~HHal~DG~~~~~l~~~l~~~~~~ 158 (263)
T PF03007_consen 80 DYHVRRVALPAPGDRAELQALVSRLAST-PLDRSRPLWEVHLIEGLEGGRFALVLKVHHALADGVSLMRLLAALLDRSPD 158 (263)
T ss_pred HHceEEecCCCCCCHHHHHHHHHHHhcC-CCCCCCCCcEEEEEecCCCCcEEEEEeehhhhhhhHhHHHHHHHHhCCCCC
Confidence 999997 4 6789999999999999 999999999999999 57899999999999999999999999986544
Q ss_pred CCCCCCCCC-CCCC-CCCCc-cc-------hHHHH---HHHHHHHHHHHHHHHH----HhcccCCCCCcccCCCCCCCCC
Q 012980 148 PEALPAVAG-GKRT-ESAGK-IG-------SLWGL---LKMVLLSIVFVLEFLL----RALWVSDRKTAISGGAGVELWP 210 (452)
Q Consensus 148 ~~~~~~~~~-~~~~-~~~~~-~~-------~~~~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 210 (452)
+...+..+. +.+. ..... .+ .+... +............... .......|+++++++.+. .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~p~t~~n~~~~~---~ 235 (263)
T PF03007_consen 159 PPPPPPPPRPPPPAPRTRPRASGLLRRAAAALGRALRAVRGAARDAGRLLRAAASARDLPLPFAAPPTPFNGPISR---R 235 (263)
T ss_pred CCCCCCCcccCcCccchhhhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccCCCcccCCCCCC---C
Confidence 333222111 1111 00000 00 11111 1111111111111110 111234567889988776 8
Q ss_pred eEEEEEeechHHHHHHHHHccCCchhHHH
Q 012980 211 RKLATATFSIDDMKAVKKAIAGATINDVL 239 (452)
Q Consensus 211 r~~~~~~~~~~~lk~~a~~~~g~Tvndvl 239 (452)
|++.+..+++++||+|++++ |+|||||+
T Consensus 236 R~~~~~~~~l~~vk~i~~~~-g~TvNDVv 263 (263)
T PF03007_consen 236 RRFATASLPLDDVKAIAKAL-GATVNDVV 263 (263)
T ss_pred eEEEEEEecHHHHHHHHHHh-CCChhhcC
Confidence 88999999999999999999 99999984
No 3
>PF06974 DUF1298: Protein of unknown function (DUF1298); InterPro: IPR009721 This entry represents the C terminus (approximately 170 residues) of a number of hypothetical plant proteins. O-acyltransferase WSD1 is a bifunctional wax ester synthase/diacylglycerol acyltransferase, which is involved in cuticular wax biosynthesis [].; GO: 0004144 diacylglycerol O-acyltransferase activity
Probab=99.95 E-value=3.4e-27 Score=203.72 Aligned_cols=150 Identities=41% Similarity=0.702 Sum_probs=132.4
Q ss_pred CCCCCCceEEEEEEEccCCCCC-CCHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHhHHHHHHHhcccccceeEEE
Q 012980 290 SGTRWGNKFGMLLLPIYYHKGG-ADPLSYVKRAKKMIDSKKLTLEGHFSYKIGNLVMSWFGAKVACLLNYRIVCNTTFTI 368 (452)
Q Consensus 290 ~~~~~gN~~~~~~~~l~~p~~~-~d~~~~l~~v~~~~~~~k~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v 368 (452)
++..+||.++.+.++| |++. +||.++++++++.|++.|++.++...+.+..+++..++......+.++...+.++++
T Consensus 3 ~~~~~GN~~~~v~~pL--~~~~~~dpl~rl~~~~~~~~~~K~s~~a~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~vi 80 (153)
T PF06974_consen 3 SKARWGNQFGFVLLPL--PTADPADPLERLRAAKRSMDRKKRSLEAMLSYALLALVPPLLGAKAARALSNRLSPKANLVI 80 (153)
T ss_pred CCCCCcceEEEEEeec--CcCCccCHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHhhhhhHHHHHhhccCcceEEE
Confidence 5678999999999999 8765 799999999999999999999988777777666667776655556666556779999
Q ss_pred eccCCCCcceeecCCeeeEEeeccCCCCceeEEEEEeeCCeEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHH
Q 012980 369 SNIVGPTEKITLADNPVAYLRANTSSLPHALTMHMMSYAGRADMQILVAKDIIPDPELLAKCFEDSLLEMKEA 441 (452)
Q Consensus 369 SNv~g~~~~l~~~g~~v~~~~~~~~~~~~~l~v~v~s~~g~l~l~i~~d~~~~~~~~~l~~~~~~~l~el~~~ 441 (452)
||||||+++++++|.+++.+++++...+++++|+++||+|+++++|++|++++||+++|+++|+++|+||.+|
T Consensus 81 SNVPGP~~~l~~~G~~v~~i~~~~~~~~~~L~itv~SY~g~l~~gi~ad~~~vpD~~~l~~~~~~~l~eL~~A 153 (153)
T PF06974_consen 81 SNVPGPQEPLYFAGARVEYIYPSPLGDGQALNITVFSYAGKLDFGIVADRDAVPDPQRLADCFEEALEELKEA 153 (153)
T ss_pred ecCCCChhheEECCeeeEEEEeeeecCCcceEEEEEEeCCEEEEEEEEccccCCCHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999988766678899999999999999999999999999999999999999999753
No 4
>COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only]
Probab=99.93 E-value=2.5e-23 Score=196.30 Aligned_cols=401 Identities=17% Similarity=0.192 Sum_probs=241.5
Q ss_pred CCccCChhhhccc--CCCc-ceEEEEEEecCCCCChhHHHHHHHhhhcccCCCCceeeeeCCCCceeeee-cccCccc--
Q 012980 5 PDEPLTPAGRLFL--QPHM-NTIIHCVVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRE-TSVDIDR-- 78 (452)
Q Consensus 5 ~~~~L~~~d~~~~--~~~~-~~~~~~~~~~~~~ld~~~l~~al~~~~~~~~p~lr~~~~~~~~g~p~w~~-~~~d~~~-- 78 (452)
...|-...|..+. +... +....+++.+.+.+|.+.+++|+.-.+. ..|.|.+++.+. ..+|+|++ -++++++
T Consensus 4 ~~~~a~~~d~f~~~~d~~i~~htl~~vi~f~~~fni~~lkkAl~~svk-a~piL~c~f~eg-~~~~~Wq~i~d~~v~~~~ 81 (439)
T COG4908 4 TLYPAEISDMFIYADDYKINDHTLHYVITFGDKFNIDRLKKALRYSVK-AVPILSCKFSEG-EKRPFWQRILDFEVDQIA 81 (439)
T ss_pred eeccccHHHHHhhhhhcCcCCceEEEEEEeCCccCHHHHHHHHHHHHH-hhhhhhhhhhhc-ccchhHHHHhccccccee
Confidence 3445555666544 2222 2234467888889999999999999999 999999999874 57899999 7777776
Q ss_pred -cceeeCChhHHHH-HHHhhhcCCCCC-CC-CCCeEEEEEc--cceEEEEeecccccccccHHHHHHHhcccCC----CC
Q 012980 79 -HFVEVHDSTSVND-YVAGLSFSSPLS-ED-KPLWEVHVLA--EHRCAVFRIHHALGDGISLVSMLLAGCRLAD----DP 148 (452)
Q Consensus 79 -hv~~l~~~~~l~~-~~~~~~~~~pld-~~-~PlW~~~lv~--~~~~l~~~~HH~l~DG~s~~~l~~~l~~~~~----~~ 148 (452)
|+....+++.+.+ .+.+++.+ +++ .. .|...+.+++ ....|++.+||+++||.|+.+++..|.+.|. +|
T Consensus 82 i~l~~t~~~~~~~E~~fs~Fi~~-k~~~t~~~PqI~v~~~r~~~~d~L~i~lhH~~~DgrG~leyL~ll~~~Ys~L~~~~ 160 (439)
T COG4908 82 IHLEETKTDEPFGEVAFSRFIVR-KLNITKESPQIKVFVVRQTVGDTLVINLHHAVCDGRGFLEYLYLLARLYSKLLDNP 160 (439)
T ss_pred EEEeeecccccchhHHHHHHHhc-ccccccCCCeEEEeeehhccCcEEEEEechhhhcchhHHHHHHHHHHHHHhcccCC
Confidence 3322122223333 33666777 776 44 6999999998 7889999999999999999999988877662 22
Q ss_pred CCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHhcccC---CCCCcccCCCCCCCCCeEEEEEeechH---H
Q 012980 149 EALPAVAGGKRTESAGKIGSLWGLLKMVLLSIVFVLEFLLRALWVS---DRKTAISGGAGVELWPRKLATATFSID---D 222 (452)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~r~~~~~~~~~~---~ 222 (452)
...| .+...+.++. .. .+..... ....+.+.+.+.-+ .+.-|+.+. .+.+.-.+.+-.++.+ .
T Consensus 161 ~~~p---~~~~~g~k~i----~~-v~d~f~~-~~~~r~~ik~~~e~n~i~~~fP~~~s--~d~~~m~~~~~~I~~~ef~~ 229 (439)
T COG4908 161 NYQP---NEESKGSKDI----FG-VRDLFDV-LERKRGLIKNLIERNRITRVFPLGGS--PDGPNMSFEKTTIPSDEFKK 229 (439)
T ss_pred CCCc---chhhccccch----hh-hhhhhhH-HHHHHHhhhhhhccCCCCccCCCcCC--CCCCcceEEEEecCHHHHHH
Confidence 2221 1111111111 00 1111111 11112222221111 112233311 1112334666777755 4
Q ss_pred HHHHHHHccCCchhHHHHHHH--HHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCcchhhhhhccCCCCCCCceEEE
Q 012980 223 MKAVKKAIAGATINDVLFGVV--SSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTRWGNKFGM 300 (452)
Q Consensus 223 lk~~a~~~~g~TvndvllAa~--a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~~~~~~~~~~~~~~~~~~~gN~~~~ 300 (452)
+++.++.+ |.||||+++||+ ...+..-..+ +....+.+.||||+|++.... +..++|..+.
T Consensus 230 ikay~k~~-gaTiNDiilaa~~~fr~~y~~~~~------k~~~~lsi~~~VDlRkyl~sk----------~~sI~Nls~~ 292 (439)
T COG4908 230 IKAYAKVH-GATINDIILAALLKFRLLYNTTHE------KANNYLSIDMPVDLRKYLPSK----------EESISNLSSY 292 (439)
T ss_pred HHHhhhhc-CCcHHHHHHHHHHHHHHHHhhhch------hhcCeeeeceeeehhhhcccc----------ccceecccee
Confidence 66678889 999999999998 4443333322 123589999999999998632 2679999999
Q ss_pred EEEEccCCCCC-CCHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHhHHH---HHHHhcccccceeEEEeccCCCCc
Q 012980 301 LLLPIYYHKGG-ADPLSYVKRAKKMIDSKKLTLEGHFSYKIGNLVMSWFGAKV---ACLLNYRIVCNTTFTISNIVGPTE 376 (452)
Q Consensus 301 ~~~~l~~p~~~-~d~~~~l~~v~~~~~~~k~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~vSNv~g~~~ 376 (452)
..+.+ +.+. +|....++.++..|+..|.+...+..+.+..+++.++-... +...+...+... .+-||+|....
T Consensus 293 ~~i~I--~~dd~~~fe~t~~~vk~~~~~~k~gl~g~~~~yl~~ilp~~fkr~~~~~~kk~~~~~~~~g-~ssTNiG~id~ 369 (439)
T COG4908 293 LTIVI--NVDDVTDFEKTLEKVKGIMNPKKIGLAGLYSFYLLGILPLMFKRKLYLKLKKLVEDRFVEG-KSSTNIGIIDE 369 (439)
T ss_pred EEEEE--eccccccHHHHHHHHHhhcCccccCcHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcc-ccccccccccc
Confidence 99999 7755 77888888898888876666555555444443332222111 111221112211 22399987653
Q ss_pred -ceeecCCeee-EEeec-c--CCCCceeEEEEEeeCCeEEEEEEecCCCCCCHHHHHHHHHHHHHHHH
Q 012980 377 -KITLADNPVA-YLRAN-T--SSLPHALTMHMMSYAGRADMQILVAKDIIPDPELLAKCFEDSLLEMK 439 (452)
Q Consensus 377 -~l~~~g~~v~-~~~~~-~--~~~~~~l~v~v~s~~g~l~l~i~~d~~~~~~~~~l~~~~~~~l~el~ 439 (452)
..-|+|.... +.+++ | .++..+++++...|.++|++++.-..+=-...+++.+.|+..|.+..
T Consensus 370 ~~~~f~g~~~d~~~~~~~p~~~ap~Fpl~~tt~g~~~tLtinf~r~~dk~~~~~~fl~~f~~~l~~~~ 437 (439)
T COG4908 370 EVPPFGGEAEDTDAFFFGPCKYAPVFPLGVTTYGYKLTLTINFYRTNDKKKITGHFLDLFAKELRETL 437 (439)
T ss_pred ccCCcCceecccceEEEeecccCccceeEEEEeccceEEEEEEEeecCcchHHHHHHHHHHhHhHHHh
Confidence 4446665544 23333 3 35556666666666666666663322212345677888888777653
No 5
>PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2.3.1.84 from EC) enzymes approximately 500 residues long that seem to be restricted to Saccharomyces. These catalyse the esterification of isoamyl alcohol by acetyl coenzyme A [].; GO: 0004026 alcohol O-acetyltransferase activity, 0006066 alcohol metabolic process
Probab=99.91 E-value=5.9e-22 Score=204.14 Aligned_cols=394 Identities=17% Similarity=0.197 Sum_probs=226.2
Q ss_pred cCChhhhccc-C--CC--cceEEEEEEecCCCCChhHHHHHHHhhhcccCCCCceeeeeCC-------------CCceee
Q 012980 8 PLTPAGRLFL-Q--PH--MNTIIHCVVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRDK-------------RGLEHW 69 (452)
Q Consensus 8 ~L~~~d~~~~-~--~~--~~~~~~~~~~~~~~ld~~~l~~al~~~~~~~~p~lr~~~~~~~-------------~g~p~w 69 (452)
+|++.|+.|. . .. .++++.+ .+..+++.+.|..||+..+. +||.|++.++.+. ..+|+|
T Consensus 1 ~lg~lE~~~~~r~~~~~y~n~~v~a--~y~~~~~~~~l~~AL~~~I~-~~P~L~~~i~~~~~~~~~~~~~~~~~~~~P~~ 77 (480)
T PF07247_consen 1 RLGFLERYFYARHRLGLYSNFIVTA--TYNKPLSKNQLYHALRSVIL-KHPILSVNIFGEDDPEDDAYYNSDNYTVRPYF 77 (480)
T ss_pred CCChhHHHHHHhhhcCCceeEEEEE--EECCCCCHHHHHHHHHHHHH-hCccEEEEEeccCCcccccccccccceecccc
Confidence 4778888877 2 22 3343434 45578999999999999999 9999999998632 347888
Q ss_pred ee-cccCcccccee------eC----ChhHHHHHHHhhhcCCCCCCC-CCCeEEEEEc-c----ceEEEEeecccccccc
Q 012980 70 RE-TSVDIDRHFVE------VH----DSTSVNDYVAGLSFSSPLSED-KPLWEVHVLA-E----HRCAVFRIHHALGDGI 132 (452)
Q Consensus 70 ~~-~~~d~~~hv~~------l~----~~~~l~~~~~~~~~~~pld~~-~PlW~~~lv~-~----~~~l~~~~HH~l~DG~ 132 (452)
.. +.+|++++|.. .. .++++.+.+.+. .. +++.. +|+||+.+++ . ...|+|.+||+++||+
T Consensus 78 ~~l~~I~l~dvV~~~~~e~~~~~d~~~~~~l~~~l~~~-~~-~~~~~~~P~Wrl~vl~~~~~~~~~~i~f~~~H~i~DG~ 155 (480)
T PF07247_consen 78 KRLPSIDLDDVVSFEQREEFRDEDEKFDEELLEILNNH-NF-PYDDPTKPLWRLIVLPNEDDESFQFIVFVFHHAIFDGM 155 (480)
T ss_pred cccCeEEHHHeeccCCccccccCCccccHHHHHHHhhc-cc-CCCCCCCCCeEEEEECCCCCCcceEEEEEecccccccH
Confidence 88 89999999922 11 234444444432 33 44444 4999999999 2 4588999999999999
Q ss_pred cHHHHHHHhcccCCC----CC--CCCCCCC-C--CC--CCCC-Ccc------chHHHHHHHHHHHHHHHHHHHHHhcccC
Q 012980 133 SLVSMLLAGCRLADD----PE--ALPAVAG-G--KR--TESA-GKI------GSLWGLLKMVLLSIVFVLEFLLRALWVS 194 (452)
Q Consensus 133 s~~~l~~~l~~~~~~----~~--~~~~~~~-~--~~--~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (452)
|++.++..++..... +. ....+.. + .. .... +.. ..++.+...+|.. .+.......
T Consensus 156 Sg~~Fh~~ll~~L~~~~~~~~~~~~~~i~~~~~~~~~~~~LP~p~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 229 (480)
T PF07247_consen 156 SGKIFHEDLLEALNSLSSDPEPDDNDVIFDPSSDVEHLPSLPPPIEELIKSSPSLYFLPKSLWSS------FIFPSLFFS 229 (480)
T ss_pred HHHHHHHHHHHHHhhccccccccccCceecCCcccccccCCCcCHHHhhhccccHHHHHHHHHHH------hhhhhcccc
Confidence 999998877764311 11 0000000 0 00 0000 000 0111111122211 110111111
Q ss_pred CC-CCcc--cCCCCCCCCCeEEEEEee---chHHHHHHHHHccCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEE
Q 012980 195 DR-KTAI--SGGAGVELWPRKLATATF---SIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGL 268 (452)
Q Consensus 195 ~~-~~~~--~~~~~~~~~~r~~~~~~~---~~~~lk~~a~~~~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~ 268 (452)
.. ..+. ...........++....+ .+..+.+.||++ |+|++.+|.|+++.||.+....... .....+.+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~t~~~~~~i~~~~~~~ll~~CR~~-~~TlT~~L~al~~~al~~~~~~~~~---~~~~~~~~~ 305 (480)
T PF07247_consen 230 KWSDKPIFATIPPIPKPFKTRYRSLSISPEELKKLLKACRKH-GTTLTALLHALIALALSKVQLPKPK---SEKSSFKIS 305 (480)
T ss_pred ccccCCccCCCCccccCCcceEEEEEECHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHhhhccccc---ccCceEEEE
Confidence 00 0111 111110000112333344 467788899999 9999999999999999974222110 112478999
Q ss_pred EEeeeccCCCcchhhhhhccCCCCCCCceEEEEEE--EccCCCCC-----CCHHHHHHHHHHHHHHhhhccchhh--hHH
Q 012980 269 AMVNIRRQPGLQDLSNLMKSNSGTRWGNKFGMLLL--PIYYHKGG-----ADPLSYVKRAKKMIDSKKLTLEGHF--SYK 339 (452)
Q Consensus 269 vPv~lR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~--~l~~p~~~-----~d~~~~l~~v~~~~~~~k~~~~~~~--~~~ 339 (452)
+|||+|+..+... +. .....+|+.++.... .+. +... ++..+..+++++.+....+...... ...
T Consensus 306 ~pvnlR~~~p~~~--~~---~~~~~~g~~v~~~~~~~~~~-~~~~~~~~~~~fW~~a~~~~~~i~~~i~~~~~~~~~~~~ 379 (480)
T PF07247_consen 306 TPVNLRRFLPEDS--EL---RDEYSYGNFVGGIDFSYSIS-PVSASRGSSENFWELARQIQKEIKESIKNGKSLNGVGFL 379 (480)
T ss_pred eeeeCCCCCCccc--cc---cccccceeEEEccceeeecc-cccccccchHHHHHHHHHHHHHHHHHHhcccccchhhhH
Confidence 9999999875320 00 001356777766433 110 2221 2346677778877776443332211 111
Q ss_pred HHHHHHHHHhHH-HHHHHhcccccceeEEEeccCCCCcceeecCCeeeEEeec-c-CCCCceeEEEEEeeC-CeEEEEEE
Q 012980 340 IGNLVMSWFGAK-VACLLNYRIVCNTTFTISNIVGPTEKITLADNPVAYLRAN-T-SSLPHALTMHMMSYA-GRADMQIL 415 (452)
Q Consensus 340 ~~~~~~~~l~~~-~~~~~~~~~~~~~~~~vSNv~g~~~~l~~~g~~v~~~~~~-~-~~~~~~l~v~v~s~~-g~l~l~i~ 415 (452)
+...+......+ .+..-.. ..+..++.|||+|-... ..-+++.|+++++. + ...+..++++++|.+ |.|.|+++
T Consensus 380 ~~~~l~~~~d~~~~~~~~~~-~~r~~t~evSNLG~~~~-~~~~~~~I~~~~Fsq~~~~~~~~f~~~viS~~~G~L~i~~s 457 (480)
T PF07247_consen 380 MNDFLLKYVDIWDFFKSKIG-KPRRSTFEVSNLGVFDF-EENGKWKIEDMVFSQSAGVIGSAFSFNVISTKGGGLNISIS 457 (480)
T ss_pred HHHHHhccCCHHHHHHhhcC-CCCCCcEEEEeCCcccC-CCCCCeEEEEEEEeCCCCCCcCCEEEEEEEcCCCceEEEEE
Confidence 111111111111 1111111 22356899999987654 44567889998885 3 335668999999986 89999999
Q ss_pred ecCCCCCCH
Q 012980 416 VAKDIIPDP 424 (452)
Q Consensus 416 ~d~~~~~~~ 424 (452)
+.++++.+.
T Consensus 458 ~~~~~~~~~ 466 (480)
T PF07247_consen 458 WQEGIVEDE 466 (480)
T ss_pred EeCCccccc
Confidence 999988743
No 6
>PRK09294 acyltransferase PapA5; Provisional
Probab=99.91 E-value=8.4e-22 Score=199.32 Aligned_cols=386 Identities=13% Similarity=0.051 Sum_probs=229.0
Q ss_pred CCCCccCChhhhcccCCCcceEEEEEEecCCCCChhHHHHHHHhhhcccCCCCceeeeeCCCCceeeee-cccCccccce
Q 012980 3 SHPDEPLTPAGRLFLQPHMNTIIHCVVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRE-TSVDIDRHFV 81 (452)
Q Consensus 3 ~~~~~~L~~~d~~~~~~~~~~~~~~~~~~~~~ld~~~l~~al~~~~~~~~p~lr~~~~~~~~g~p~w~~-~~~d~~~hv~ 81 (452)
+...++|++.+++|......+ ...+.++|++|.+.|++++...+. +||.||+++.....+.+.+.. ..... .+.
T Consensus 4 ~~~~~~L~~~~~~f~~~~~~~--~~~~~l~g~lD~~~L~~Al~~l~~-rhp~Lr~~~~~~~~~~~~~~~~~~~~~--~v~ 78 (416)
T PRK09294 4 GSVIRKLAPSEEVFARYEAFT--GYTAHLRGVLDIDALSDAFDALLR-AHPVLAAHLEQDSDGGWELVADDLLHP--GIV 78 (416)
T ss_pred CCcccCCchHHhhhhccCceE--EEEEEEcCCCCHHHHHHHHHHHHH-hCHHhhEEEEECCCCceEEeeCCcCCC--CeE
Confidence 456789999999999744333 347788899999999999999999 999999999654334444443 22222 222
Q ss_pred ee--CChhHHHHHHHhhhcCCCCCCC--CCCeEEEEEc--cceEEEEeecccccccccHHHHHHHhcccCCCC---CCCC
Q 012980 82 EV--HDSTSVNDYVAGLSFSSPLSED--KPLWEVHVLA--EHRCAVFRIHHALGDGISLVSMLLAGCRLADDP---EALP 152 (452)
Q Consensus 82 ~l--~~~~~l~~~~~~~~~~~pld~~--~PlW~~~lv~--~~~~l~~~~HH~l~DG~s~~~l~~~l~~~~~~~---~~~~ 152 (452)
.+ .+.++ .. +++.+ .|++++.++. +++.+++.+||+++||+|+..++.+++..|... +..+
T Consensus 79 ~~d~~~~~~---------~~-~~~l~~~~~l~~~~~~~~~~~~~l~l~~hH~i~DG~S~~~ll~el~~~Y~~~~~~~~~~ 148 (416)
T PRK09294 79 VVDGDAARP---------LP-ELQLDQGVSLLALDVVPDDGGARVTLYIHHSIADAHHSASLLDELWSRYTDVVTTGDPG 148 (416)
T ss_pred EEecccccc---------cC-CCCCCCCCceEEEEEEEcCCCEEEEEEeccEeEccccHHHHHHHHHHHHHHHHhCCCCC
Confidence 21 11111 34 55554 3589998876 688999999999999999999999988876321 1111
Q ss_pred CCC-CCCCCCCCCccchHHHHHHHHHHH-HHHHHHHHHHh---cccCCCCCcccCCCCCCCCCeEEEEEeec---hHHHH
Q 012980 153 AVA-GGKRTESAGKIGSLWGLLKMVLLS-IVFVLEFLLRA---LWVSDRKTAISGGAGVELWPRKLATATFS---IDDMK 224 (452)
Q Consensus 153 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~lk 224 (452)
..+ .+.+ ......+.. +..+.. ..+..++.... .....+..+...+... ..........++ .++++
T Consensus 149 ~~~~~~~~---~~~ed~~~~--~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~L~ 222 (416)
T PRK09294 149 PIRPQPAP---QSLEAVLAQ--RGIRRQALSGAERFMPAMYAYELPPTPTAAVLAKPGL-PQAVPVTRCRLSKAQTSSLA 222 (416)
T ss_pred CCCCCCCC---cCHHHHHHh--cCCCcccccchhhhhhhhccccCCCCCcCcCCCCCCC-CCCCceeEEEeCHHHHHHHH
Confidence 110 0000 000000000 000000 00000000000 0001111111111100 001123344566 78899
Q ss_pred HHHHHccCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCcchhhhhhccCCCCCCCceEEEEEEE
Q 012980 225 AVKKAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTRWGNKFGMLLLP 304 (452)
Q Consensus 225 ~~a~~~~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~ 304 (452)
+.||++ |+|+|++++|+++.++.++... + ...+.+++||++|...+.. -.....+|.++.+.+.
T Consensus 223 ~~a~~~-~~t~~~~l~Aa~~~~l~r~~~~------~-~~~i~~~~pv~~R~~l~p~--------~~~~~~~n~~g~~~~~ 286 (416)
T PRK09294 223 AFGRRH-RLTVNALVSAAILLAEWQLRRT------P-HVPLPYVYPVDLRFRLTPP--------VAATEGTNLLGAATYL 286 (416)
T ss_pred HHHHHc-CCcHHHHHHHHHHHHHHHhcCC------C-CCceeeecchhhHhhcCCC--------CCcccceeeEeeeeee
Confidence 999999 9999999999999999988542 2 2468889999999865311 0124679999988777
Q ss_pred ccCCCCC-CCHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHhHHHHHHHhcccccceeEEEeccCCCCcceeecCC
Q 012980 305 IYYHKGG-ADPLSYVKRAKKMIDSKKLTLEGHFSYKIGNLVMSWFGAKVACLLNYRIVCNTTFTISNIVGPTEKITLADN 383 (452)
Q Consensus 305 l~~p~~~-~d~~~~l~~v~~~~~~~k~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~vSNv~g~~~~l~~~g~ 383 (452)
+ .++. .++.+.+++++++++...++.. +...+.... ..+. .+......++.+||++..+.+-..+|.
T Consensus 287 ~--~~~~~~sf~ela~~v~~~~~~~l~~~~--v~~~~~~~~-~~~~-------~~~~~~~~~v~~Snlg~~~~~~~p~~~ 354 (416)
T PRK09294 287 A--EIGPDTDIVDLARAIAATLRADLADGV--IQQSFLHFG-TAFE-------GTPPGLPPVVFITNLGVAPPMRTPPGL 354 (416)
T ss_pred c--cccCCCCHHHHHHHHHHHHhhhhhcce--eeehhhccc-cccc-------CCCCCCCCeEEEecCCcCCCCCCCCCe
Confidence 7 5544 5789999999999987666544 111111110 0000 001011236789999876444444555
Q ss_pred eeeEEeec-c-CCCCceeEEEEEeeCCeEEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q 012980 384 PVAYLRAN-T-SSLPHALTMHMMSYAGRADMQILVAKDIIPDPELLAKCFEDSLLEMKE 440 (452)
Q Consensus 384 ~v~~~~~~-~-~~~~~~l~v~v~s~~g~l~l~i~~d~~~~~~~~~l~~~~~~~l~el~~ 440 (452)
+++.+... . ..+......+++||+|+|.|++.+....+ +...|++.+.|..+..
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~f~~~~~~~---~~~~~~~~~~~~~~~~ 410 (416)
T PRK09294 355 ELEDIHSQFYCAISVPIGGYSCGVFAGRLLIEHHGHIAAP---GKSLEAIRELLCTVPS 410 (416)
T ss_pred EEEeeeeeeeecccCceeEEEEeeecCceeeeeccCcCCc---cchHHHHHHHHHhhhh
Confidence 56554331 1 11122235889999999999999986533 4777888877776644
No 7
>PRK12467 peptide synthase; Provisional
Probab=99.86 E-value=9.5e-20 Score=225.36 Aligned_cols=392 Identities=16% Similarity=0.112 Sum_probs=246.3
Q ss_pred CccCChhhhccc-----CCCcc-eEEEEEEecCCCCChhHHHHHHHhhhcccCCCCceeeeeCCCCceeeee-cccCccc
Q 012980 6 DEPLTPAGRLFL-----QPHMN-TIIHCVVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRE-TSVDIDR 78 (452)
Q Consensus 6 ~~~L~~~d~~~~-----~~~~~-~~~~~~~~~~~~ld~~~l~~al~~~~~~~~p~lr~~~~~~~~g~p~w~~-~~~d~~~ 78 (452)
..|||+.|+.+| ++... +.+..++++.|++|.+.|++++...+. +||.||++++.. .+.++++. +..++..
T Consensus 49 ~~pLS~~Q~~lw~~~~~~~~~~~Yni~~~~~l~g~lD~~~L~~A~~~vv~-rH~~LRt~f~~~-~~~~~q~v~~~~~~~i 126 (3956)
T PRK12467 49 RIPLSYAQERQWFLWQLDPDSAAYNIPTALRLRGELDVSALRRAFDALVA-RHESLRTRFVQD-EEGFRQVIDASLSLTI 126 (3956)
T ss_pred CCCCCHHHHHHHHHHHhCCCCCceeccEEEEEeCCCCHHHHHHHHHHHHH-HhhhheEEEEec-CCeEEEEEcCCCCCce
Confidence 469999999855 34433 334567889999999999999999999 999999999875 57787776 5555444
Q ss_pred cceee------CChhHHHHHHHhhhcCCCCCCC-CCCeEEEEEc---cceEEEEeecccccccccHHHHHHHhcccCCCC
Q 012980 79 HFVEV------HDSTSVNDYVAGLSFSSPLSED-KPLWEVHVLA---EHRCAVFRIHHALGDGISLVSMLLAGCRLADDP 148 (452)
Q Consensus 79 hv~~l------~~~~~l~~~~~~~~~~~pld~~-~PlW~~~lv~---~~~~l~~~~HH~l~DG~s~~~l~~~l~~~~~~~ 148 (452)
++..+ ..++.+.+++.+...+ |||.. .|+||+.+++ +++.+++.+||.++||+|+..++.++...|...
T Consensus 127 ~~~d~~~~~~~~~~~~~~~~~~~~~~~-~fdL~~~pl~r~~l~~~~~~~~~l~l~~HHii~DG~S~~~l~~el~~~Y~~~ 205 (3956)
T PRK12467 127 PLDDLANEQGRARESQIEAYINEEVAR-PFDLANGPLLRVRLLRLADDEHVLVVTLHHIISDGWSMRVLVEELVQLYSAY 205 (3956)
T ss_pred eEEecccCChhhHHHHHHHHHHHHhcC-CCCCCCCCceEEEEEEECCCcEEEEEecCeeeEccchHHHHHHHHHHHHHHH
Confidence 44332 1234577888888889 99986 5999999998 688999999999999999999999988876321
Q ss_pred ---C--CCCCCCCCCCCCCCCcc----chHHHHHHHHHHHHHHHHHHHHHhcccCCCCCccc--CCCCCCC-C-CeEEEE
Q 012980 149 ---E--ALPAVAGGKRTESAGKI----GSLWGLLKMVLLSIVFVLEFLLRALWVSDRKTAIS--GGAGVEL-W-PRKLAT 215 (452)
Q Consensus 149 ---~--~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~-~r~~~~ 215 (452)
. ..+..+.+......+.. .........+|+... ....... ..|.. .+..... + ...+..
T Consensus 206 ~~g~~~~~~~~~~~y~dy~~~~~~~l~~~~~~~~~~yW~~~L---~~~~~~~-----~lp~~~~~~~~~~~~~~~~~~~l 277 (3956)
T PRK12467 206 SQGREPSLPALPIQYADYAIWQRSWLEAGERERQLAYWQEQL---GGEHTVL-----ELPTDRPRPAVPSYRGARLRVDL 277 (3956)
T ss_pred hcCCCCCCCCCCCCHHHHHHHHHHHhcChhhHHHHHHHHHHh---ccCCCcC-----CCCCCCCCCCCCCcCceeEEEeC
Confidence 1 11111111100000000 000011224454211 0000000 00111 1100000 0 112222
Q ss_pred EeechHHHHHHHHHccCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCcchhhhhhccCCCCCCC
Q 012980 216 ATFSIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTRWG 295 (452)
Q Consensus 216 ~~~~~~~lk~~a~~~~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~~~~~~~~~~~~~~~~~~~g 295 (452)
..-..++++++|+++ |+|++.+++||++..|++|..+ ..+.+++|++.|...+ ..
T Consensus 278 ~~~~~~~L~~~a~~~-g~T~~~vl~aA~a~lL~r~tg~---------~dv~iG~pvsgR~~~~---------------~~ 332 (3956)
T PRK12467 278 PQALSAGLKALAQRE-GVTLFMVLLASFQTLLHRYSGQ---------SDIRIGVPNANRNRVE---------------TE 332 (3956)
T ss_pred CHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHHHHhcCC---------CCEEEEeccCCCCchh---------------hh
Confidence 233357899999999 9999999999999999999643 3799999999997532 34
Q ss_pred ceEEEEEEEccCC--CCC-CCHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHhHHHHHHHhcccccceeEEEeccC
Q 012980 296 NKFGMLLLPIYYH--KGG-ADPLSYVKRAKKMIDSKKLTLEGHFSYKIGNLVMSWFGAKVACLLNYRIVCNTTFTISNIV 372 (452)
Q Consensus 296 N~~~~~~~~l~~p--~~~-~d~~~~l~~v~~~~~~~k~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~vSNv~ 372 (452)
+.+|.+...+|+. ++. .+..+.++++++.+.....++...+.. +.. .+... +......+++..+++.|.+
T Consensus 333 ~~iG~fiNtlplrv~~~~~~t~~~ll~~v~~~~~~a~~hq~~p~~~-l~~----~l~~~--~~~~~~plf~~~~~~~~~~ 405 (3956)
T PRK12467 333 RLIGFFVNTQVLKAEVDPQASFLELLQQVKRTALGAQAHQDLPFEQ-LVE----ALQPE--RSLSHSPLFQVMFNHQNTA 405 (3956)
T ss_pred cceeeeeeeeeeEeecCCCCCHHHHHHHHHHHHHHHHhcccCCHHH-HHH----HhCCC--CCCCCCCceEEEEEeeccc
Confidence 4555555555333 333 467999999999999888887754432 222 22211 1122334565566666654
Q ss_pred CCC---cceeecCCeeeEEeeccCCCCceeEEEEEeeCCeEEEEEEecCCCCC--CHHHHHHHHHHHHHHHHH
Q 012980 373 GPT---EKITLADNPVAYLRANTSSLPHALTMHMMSYAGRADMQILVAKDIIP--DPELLAKCFEDSLLEMKE 440 (452)
Q Consensus 373 g~~---~~l~~~g~~v~~~~~~~~~~~~~l~v~v~s~~g~l~l~i~~d~~~~~--~~~~l~~~~~~~l~el~~ 440 (452)
... ....+.|..+..+..........+++.+...++.+.+.+.++.+++. ..+.+.+.|...|.++..
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dL~l~v~~~~~~l~~~~~y~~~lf~~~~~~~~~~~~~~~l~~~~~ 478 (3956)
T PRK12467 406 TGGRDREGAQLPGLTVEELSWARHTAQFDLALDTYESAQGLWAAFTYATDLFEATTIERLATHWRNLLEAIVA 478 (3956)
T ss_pred ccccccccccCCCceEEEeecCCCceeeeeEEEEEecCCcEEEEEEEecccCCHHHHHHHHHHHHHHHHHHhh
Confidence 321 12345566665543322234567888888778889999999999997 345566666666666543
No 8
>PRK12467 peptide synthase; Provisional
Probab=99.84 E-value=3.2e-19 Score=220.78 Aligned_cols=392 Identities=14% Similarity=0.109 Sum_probs=244.7
Q ss_pred CCccCChhhhccc-----CCCc-ceEEEEEEecCCCCChhHHHHHHHhhhcccCCCCceeeeeCCCCceeeee-cccCcc
Q 012980 5 PDEPLTPAGRLFL-----QPHM-NTIIHCVVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRE-TSVDID 77 (452)
Q Consensus 5 ~~~~L~~~d~~~~-----~~~~-~~~~~~~~~~~~~ld~~~l~~al~~~~~~~~p~lr~~~~~~~~g~p~w~~-~~~d~~ 77 (452)
...|||+.|+.+| ++.. .+.+...+.++|.+|.++|++++...+. +||.||++++.. .|.++++. +...+.
T Consensus 1115 ~~~PlS~~Q~~lw~~~~~~~~~~~Y~~~~~~~l~g~ld~~~L~~Al~~vv~-rH~~LRT~f~~~-~~~~~q~v~~~~~~~ 1192 (3956)
T PRK12467 1115 QPLPLSYAQERQWFLWQLEPGSAAYHIPQALRLKGPLDIEALERSFDALVA-RHESLRTTFVQE-DGRTRQVIHPVGSLT 1192 (3956)
T ss_pred cccccchHHHHHHHHHhhCCCCccceeeEEEEECCCcCHHHHHHHHHHHHH-hCCcceEEEEcc-CCeEEEEECCCCCCc
Confidence 3468999998854 2333 3445578899999999999999999999 999999999874 56777666 544443
Q ss_pred ccceee----CChhHHHHHHHhhhcCCCCCCC-CCCeEEEEEc---cceEEEEeecccccccccHHHHHHHhcccCCCC-
Q 012980 78 RHFVEV----HDSTSVNDYVAGLSFSSPLSED-KPLWEVHVLA---EHRCAVFRIHHALGDGISLVSMLLAGCRLADDP- 148 (452)
Q Consensus 78 ~hv~~l----~~~~~l~~~~~~~~~~~pld~~-~PlW~~~lv~---~~~~l~~~~HH~l~DG~s~~~l~~~l~~~~~~~- 148 (452)
..+..+ ..++++.+++++.... |||.. .|+||+.+++ +.+.+++.+||.++||+|+..++.++...|...
T Consensus 1193 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~fdl~~~pl~R~~l~~~~~~~~~l~l~~HHii~DG~S~~ill~el~~~Y~~~~ 1271 (3956)
T PRK12467 1193 LEEPLLLAADKDEAQLKVYVEAEARQ-PFDLEQGPLLRVGLLRLAADEHVLVLTLHHIVSDGWSMQVLVDELVALYAAYS 1271 (3956)
T ss_pred eEEeecCcccchHHHHHHHHHHHhhC-CCCCCCCcceeEEEEEECCCeEEEEEecchhhhhHhHHHHHHHHHHHHHHHHh
Confidence 222222 2345678888888889 99986 5999999998 578999999999999999999999988876211
Q ss_pred -CCCCCCCC---CCCCCCCCccchH----HHHHHHHHHHHHHHHHHHHHhcccCCCCCcccCCCC--CCCCCe--EEEEE
Q 012980 149 -EALPAVAG---GKRTESAGKIGSL----WGLLKMVLLSIVFVLEFLLRALWVSDRKTAISGGAG--VELWPR--KLATA 216 (452)
Q Consensus 149 -~~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~r--~~~~~ 216 (452)
...+..+. ++.....+...++ ......+|+.. +... .+....|...+.. ...... .+...
T Consensus 1272 ~g~~~~l~~~~~~y~dy~~wq~~~l~~~~~~~~~~yW~~~------L~~~--~~~~~lp~~~~~~~~~~~~~~~~~~~l~ 1343 (3956)
T PRK12467 1272 QGQSLQLPALPIQYADYAVWQRQWMDAGERARQLAYWKAQ------LGGE--QPVLELPTDRPRPAVQSHRGARLAFELP 1343 (3956)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHH------hcCC--CCcccCCCCCCCCcccCcCceEEEEEeC
Confidence 11111111 1100000000000 00112344321 1000 0000111111110 000011 12222
Q ss_pred eechHHHHHHHHHccCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCcchhhhhhccCCCCCCCc
Q 012980 217 TFSIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTRWGN 296 (452)
Q Consensus 217 ~~~~~~lk~~a~~~~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~~~~~~~~~~~~~~~~~~~gN 296 (452)
.-..+.+++.|+++ |+|++.+++||++..|++|..+ +.+.+++|++.|...+ +.+
T Consensus 1344 ~~~~~~L~~~a~~~-~vT~~~vl~aA~a~lL~r~sg~---------~dvv~G~pvsgR~~~~---------------~~~ 1398 (3956)
T PRK12467 1344 PALAEGLRALARRE-GVTLFMLLLASFQTLLHRYSGQ---------DDIRVGVPIANRNRAE---------------TEG 1398 (3956)
T ss_pred HHHHHHHHHHHHHh-CCCHHHHHHHHHHHHHHHhhCC---------CCEEEEecccCCCchh---------------hhc
Confidence 33357899999999 9999999999999999999743 3799999999997532 344
Q ss_pred eEEEEEEEccCCCC--C-CCHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHhHHHHHHHhcccccceeEEEeccCC
Q 012980 297 KFGMLLLPIYYHKG--G-ADPLSYVKRAKKMIDSKKLTLEGHFSYKIGNLVMSWFGAKVACLLNYRIVCNTTFTISNIVG 373 (452)
Q Consensus 297 ~~~~~~~~l~~p~~--~-~d~~~~l~~v~~~~~~~k~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~vSNv~g 373 (452)
.+|.+...+|++++ . .++.+.++++++.......++...+.. +.. .+... +......+++..+++.|.+.
T Consensus 1399 ~vG~fvNtlplR~~~~~~~t~~~~l~~v~~~~~~a~~hq~~p~~~-i~~----~l~~~--r~~~~~pLFq~~~~~~~~~~ 1471 (3956)
T PRK12467 1399 LIGFFVNTQVLRAEVDGQASFQQLLQQVKQAALEAQAHQDLPFEQ-LVE----ALQPE--RSLSHSPLFQVMFNHQRDDH 1471 (3956)
T ss_pred ceeeeeeeeEEEEecCCCCCHHHHHHHHHHHHHHHHhccCCCHHH-HHH----Hhccc--ccCCCCCceeEEEEeecccc
Confidence 56666655533332 2 467889999999998888887754433 222 12211 11223344555555555432
Q ss_pred CCcceeecCCeeeEEeeccCCCCceeEEEEEeeCCeEEEEEEecCCCCC--CHHHHHHHHHHHHHHHHH
Q 012980 374 PTEKITLADNPVAYLRANTSSLPHALTMHMMSYAGRADMQILVAKDIIP--DPELLAKCFEDSLLEMKE 440 (452)
Q Consensus 374 ~~~~l~~~g~~v~~~~~~~~~~~~~l~v~v~s~~g~l~l~i~~d~~~~~--~~~~l~~~~~~~l~el~~ 440 (452)
.. ...+.|..++.+..........+++.+.-.++.+.+.+.+++++++ ..+.+.+.|...|..+..
T Consensus 1472 ~~-~~~~~~~~~~~~~~~~~~~~~dL~l~v~~~~~~l~l~~~y~~~lf~~~~i~~l~~~~~~lL~~l~~ 1539 (3956)
T PRK12467 1472 QA-QAQLPGLSVESLSWESQTAQFDLTLDTYESSEGLQASLTYATDLFEASTIERLAGHWLNLLQGLVA 1539 (3956)
T ss_pred cc-cccCCCceeEeeecCCcccccceEEEEEecCCeEEEEEEEeCCcCCHHHHHHHHHHHHHHHHHHhh
Confidence 21 2445665555443222234567888887778899999999999997 356677777777766653
No 9
>PRK12316 peptide synthase; Provisional
Probab=99.82 E-value=1.6e-18 Score=218.00 Aligned_cols=392 Identities=14% Similarity=0.081 Sum_probs=243.9
Q ss_pred CccCChhhhccc-----CCCc-ceEEEEEEecCCCCChhHHHHHHHhhhcccCCCCceeeeeCCCCceeeee-cccCccc
Q 012980 6 DEPLTPAGRLFL-----QPHM-NTIIHCVVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRE-TSVDIDR 78 (452)
Q Consensus 6 ~~~L~~~d~~~~-----~~~~-~~~~~~~~~~~~~ld~~~l~~al~~~~~~~~p~lr~~~~~~~~g~p~w~~-~~~d~~~ 78 (452)
..||++.|+.+| .+.. .+.+..++.++|.+|.+.|++++...+. +||.||++++.. .+.++++. +..++..
T Consensus 2602 ~~pls~~Q~~lw~~~~~~~~~~~Y~~~~~~~l~g~ld~~~L~~A~~~lv~-rH~~LRt~f~~~-~~~~~q~v~~~~~~~~ 2679 (5163)
T PRK12316 2602 PLPLSHAQQRQWFLWQLEPESAAYHLPSALHLRGVLDQAALEQAFDALVL-RHETLRTRFVEV-GEQTRQVILPNMSLRI 2679 (5163)
T ss_pred CCCCChHHHhHHHHcccCCCccccccceEEEEcCCcCHHHHHHHHHHHHH-HhhHhhcceeee-CCeEEEEECCCCCccc
Confidence 458888888744 2232 3334567889999999999999999999 999999999875 56677666 5444432
Q ss_pred cceee--CChhHHHHHHHhhhcCCCCCCCC-CCeEEEEEc---cceEEEEeecccccccccHHHHHHHhcccCCCC--CC
Q 012980 79 HFVEV--HDSTSVNDYVAGLSFSSPLSEDK-PLWEVHVLA---EHRCAVFRIHHALGDGISLVSMLLAGCRLADDP--EA 150 (452)
Q Consensus 79 hv~~l--~~~~~l~~~~~~~~~~~pld~~~-PlW~~~lv~---~~~~l~~~~HH~l~DG~s~~~l~~~l~~~~~~~--~~ 150 (452)
..... ..++++.+.+.+...+ |||... |+||+.+++ +.+.+++.+||+++||+|+..++.++...|... ..
T Consensus 2680 ~~~~~~~~~~~~~~~~~~~~~~~-~fdl~~~pl~r~~l~~~~~~~~~l~l~~HHii~DG~S~~~l~~eL~~~Y~~~~~g~ 2758 (5163)
T PRK12316 2680 VLEDCAGVADAAIRQRVAEEIQR-PFDLARGPLLRVRLLALDGQEHVLVITQHHIVSDGWSMQVMVDELVQAYAGARRGE 2758 (5163)
T ss_pred eeeccccCCHHHHHHHHHHHhhC-CCCCCCCCcEEEEEEEECCCeEEEEEecCcCcccHhHHHHHHHHHHHHHHHHhcCC
Confidence 22221 3456688888888899 999874 999999998 577899999999999999999999988876321 11
Q ss_pred CCCCCCCCCCCC---CCcc----chHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccCCCCC--C-CC-CeEEEEEeec
Q 012980 151 LPAVAGGKRTES---AGKI----GSLWGLLKMVLLSIVFVLEFLLRALWVSDRKTAISGGAGV--E-LW-PRKLATATFS 219 (452)
Q Consensus 151 ~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~-~r~~~~~~~~ 219 (452)
.+..+....... .+.. ..-....+.+|.... .... +....|...+... . .+ ...+......
T Consensus 2759 ~~~l~~~~~~y~dy~~~~~~~~~~~~~~~~~~yW~~~L------~~~~--~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~ 2830 (5163)
T PRK12316 2759 QPTLPPLPLQYADYAAWQRAWMDSGEGARQLDYWRERL------GGEQ--PVLELPLDRPRPALQSHRGARLDVALDVAL 2830 (5163)
T ss_pred CCCCCCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHh------cCCC--CcccCCccCCCCccCCCCCceEEEECCHHH
Confidence 111111111000 0000 000111224444211 0000 0001111111100 0 00 1112233333
Q ss_pred hHHHHHHHHHccCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCcchhhhhhccCCCCCCCceEE
Q 012980 220 IDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTRWGNKFG 299 (452)
Q Consensus 220 ~~~lk~~a~~~~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~~~~~~~~~~~~~~~~~~~gN~~~ 299 (452)
..++++.|+++ |+|++.+++||++..|++|..+ +.+.+++|++.|...+.. ...|-++.
T Consensus 2831 ~~~L~~~a~~~-~vT~~~~l~aA~a~~L~r~tg~---------~dv~iG~pvsgR~~~~~~-----------~~iG~fvn 2889 (5163)
T PRK12316 2831 SRELLALARRE-GVTLFMLLLASFQVLLHRYSGQ---------SDIRVGVPIANRNRAETE-----------RLIGFFVN 2889 (5163)
T ss_pred HHHHHHHHHHh-CCCHHHHHHHHHHHHHHHhcCC---------CceEEEeeecCCCchhHH-----------hhhhheec
Confidence 57899999999 9999999999999999999643 379999999999643321 23455555
Q ss_pred EEEEEccCCCCC-CCHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHhHHHHHHHhcccccceeEEEeccCCCCcce
Q 012980 300 MLLLPIYYHKGG-ADPLSYVKRAKKMIDSKKLTLEGHFSYKIGNLVMSWFGAKVACLLNYRIVCNTTFTISNIVGPTEKI 378 (452)
Q Consensus 300 ~~~~~l~~p~~~-~d~~~~l~~v~~~~~~~k~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~vSNv~g~~~~l 378 (452)
.+.+.+ ..+. ..+.+.++++++.+.....++...+.. +.. .+... +......+++..+++.|.+. ...
T Consensus 2890 tlPlrv--~l~~~~t~~~ll~~v~~~~~~~~~hq~~p~~~-iv~----~l~~~--r~~~~~plf~~~~~~~~~~~--~~~ 2958 (5163)
T PRK12316 2890 TQVLRA--QVDAQLAFRDLLGQVKEQALGAQAHQDLPFEQ-LVE----ALQPE--RSLSHSPLFQVMYNHQSGER--AAA 2958 (5163)
T ss_pred ceeEEE--ecCCCCCHHHHHHHHHHHHHHHHHcCCCCHHH-HHH----Hhccc--cccCCCCceeEEEeeecccc--ccc
Confidence 554444 3333 467899999999998888887654432 222 22211 11122334555555555432 223
Q ss_pred eecCCeeeEEeeccCCCCceeEEEEEeeCCeEEEEEEecCCCCC--CHHHHHHHHHHHHHHHHH
Q 012980 379 TLADNPVAYLRANTSSLPHALTMHMMSYAGRADMQILVAKDIIP--DPELLAKCFEDSLLEMKE 440 (452)
Q Consensus 379 ~~~g~~v~~~~~~~~~~~~~l~v~v~s~~g~l~l~i~~d~~~~~--~~~~l~~~~~~~l~el~~ 440 (452)
.+.|..+..+..........+.+.+...++.+.+.+.++.++++ ..+.+.+.|...|.++..
T Consensus 2959 ~~~~~~~~~~~~~~~~~~~dL~l~v~~~~~~l~~~~~y~~~~~~~~~i~~l~~~f~~lL~~l~~ 3022 (5163)
T PRK12316 2959 QLPGLHIESFAWDGAATQFDLALDTWESAEGLGASLTYATDLFDARTVERLARHWQNLLRGMVE 3022 (5163)
T ss_pred cCCCceeEeeeccCCccceeeEEEEEecCCcEEEEEEECcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 45565555543322334567888888888889999999999997 356677777777666643
No 10
>PRK12316 peptide synthase; Provisional
Probab=99.82 E-value=3.8e-18 Score=214.71 Aligned_cols=395 Identities=15% Similarity=0.131 Sum_probs=240.7
Q ss_pred CCccCChhhhccc-----CCC-cceEEEEEEecCCCCChhHHHHHHHhhhcccCCCCceeeeeCCCCceeeee-cccCcc
Q 012980 5 PDEPLTPAGRLFL-----QPH-MNTIIHCVVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRE-TSVDID 77 (452)
Q Consensus 5 ~~~~L~~~d~~~~-----~~~-~~~~~~~~~~~~~~ld~~~l~~al~~~~~~~~p~lr~~~~~~~~g~p~w~~-~~~d~~ 77 (452)
...|||+.|+.+| .+. ..+++...+++.|++|.+.|++++...+. +|+.||++++.. .+.+..+. +...+.
T Consensus 48 ~~~plS~~Q~~lw~~~~l~~~~~~yn~~~~~~i~g~ld~~~l~~A~~~vv~-rHe~LRt~f~~~-~~~~~q~v~~~~~~~ 125 (5163)
T PRK12316 48 ERDRLSYAQQRMWFLWQLEPQSGAYNLPSAVRLNGPLDRQALERAFASLVQ-RHETLRTVFPRG-ADDSLAQVPLDRPLE 125 (5163)
T ss_pred CCCCCCHHHHHHHHHHHhCCCCCcchhcEEEEEeCCCCHHHHHHHHHHHHH-HhhhceEEEEee-CCeEEEEECCCCCCC
Confidence 3469999999855 233 23334567889999999999999999999 999999999875 45565544 433332
Q ss_pred ccceee--CChh----HHHHHHHhhhcCCCCCCC-CCCeEEEEEc---cceEEEEeecccccccccHHHHHHHhcccCCC
Q 012980 78 RHFVEV--HDST----SVNDYVAGLSFSSPLSED-KPLWEVHVLA---EHRCAVFRIHHALGDGISLVSMLLAGCRLADD 147 (452)
Q Consensus 78 ~hv~~l--~~~~----~l~~~~~~~~~~~pld~~-~PlW~~~lv~---~~~~l~~~~HH~l~DG~s~~~l~~~l~~~~~~ 147 (452)
-.+..+ .+++ .+.+++.+...+ |||.. .|++|+.+++ +++.+++.+||.++||+|+..++.++...|..
T Consensus 126 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~-pfdl~~~pl~r~~l~~~~~~~~~l~l~~HHii~Dg~S~~~l~~el~~~Y~~ 204 (5163)
T PRK12316 126 VEFEDCSGLPEAEQEARLRDEAQRESLQ-PFDLCEGPLLRVRLLRLGEEEHVLLLTLHHIVSDGWSMNVLIEEFSRFYSA 204 (5163)
T ss_pred ccEEECCCCChhhHHHHHHHHHHHhhcC-CCCCCCCCceEEEEEEECCCcEEEEEcccceeechhHHHHHHHHHHHHHHH
Confidence 222222 1222 344455555688 99986 5999999998 67899999999999999999999999887732
Q ss_pred C--CCCCCCCCCCCCC---CCCcc----chHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccCCCC--CCC-C-CeEEE
Q 012980 148 P--EALPAVAGGKRTE---SAGKI----GSLWGLLKMVLLSIVFVLEFLLRALWVSDRKTAISGGAG--VEL-W-PRKLA 214 (452)
Q Consensus 148 ~--~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~-~r~~~ 214 (452)
. ...+..+..+... ..+.. .......+.+|.... ... .+....|...+.. ... + ...+.
T Consensus 205 ~~~~~~~~l~~~~~~y~dy~~~q~~~~~~~~~~~~~~yW~~~l------~~~--~~~~~lp~~~~~~~~~~~~~~~~~~~ 276 (5163)
T PRK12316 205 YATGAEPGLPALPIQYADYALWQRSWLEAGEQERQLEYWRAQL------GEE--HPVLELPTDHPRPAVPSYRGSRYEFS 276 (5163)
T ss_pred HhcCCCCCCCCCCCCHHHHHHHHHHHhcChhHHHHHHHHHHHh------CCC--CccccCCCCCCCCCCCCcCCeeEEEe
Confidence 1 1111111111000 00000 000111223443211 000 0000111111110 000 0 11122
Q ss_pred EEeechHHHHHHHHHccCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCcchhhhhhccCCCCCC
Q 012980 215 TATFSIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTRW 294 (452)
Q Consensus 215 ~~~~~~~~lk~~a~~~~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~~~~~~~~~~~~~~~~~~~ 294 (452)
...-....++++|+++ |+|++.+++||++..|++|..+ ..+.+++|++.|..... ....
T Consensus 277 l~~~~~~~l~~~a~~~-~~T~~~~llaa~a~lL~~~tg~---------~dv~ig~pvs~R~~~~~-----------~~~v 335 (5163)
T PRK12316 277 IDPALAEALRGTARRQ-GLTLFMLLLGAFNVLLHRYSGQ---------TDIRVGVPIANRNRAEV-----------EGLI 335 (5163)
T ss_pred cCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhcCC---------CCeEEEeeeCCCCchhh-----------hcce
Confidence 2222357899999999 9999999999999999999743 37999999999976432 1345
Q ss_pred CceEEEEEEEccCCCCC-CCHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHhHHHHHHHhcccccceeEEEeccCC
Q 012980 295 GNKFGMLLLPIYYHKGG-ADPLSYVKRAKKMIDSKKLTLEGHFSYKIGNLVMSWFGAKVACLLNYRIVCNTTFTISNIVG 373 (452)
Q Consensus 295 gN~~~~~~~~l~~p~~~-~d~~~~l~~v~~~~~~~k~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~vSNv~g 373 (452)
|-++..+.+.+ ..+. .++.+.++++++.+.....++...+.. +.. .+... +.......++..+.+.|...
T Consensus 336 G~f~n~lplr~--~~~~~~tf~~~l~~v~~~~~~a~~hq~~p~~~-iv~----~l~~~--r~~~~~plf~~~~~~~~~~~ 406 (5163)
T PRK12316 336 GFFVNTQVLRS--VFDGRTRVATLLAGVKDTVLGAQAHQDLPFER-LVE----ALKVE--RSLSHSPLFQVMYNHQPLVA 406 (5163)
T ss_pred eeeeeeEEEEE--ecCCCCCHHHHHHHHHHHHHHHHHhccCCHHH-HHH----HhCCC--CCCCCCCcEEEEEEeecccc
Confidence 55555555555 4443 468999999999999888887754432 222 22211 11112334555555555433
Q ss_pred C-CcceeecCCeeeEEeeccCCCCceeEEEEEeeCCeEEEEEEecCCCCC--CHHHHHHHHHHHHHHHHH
Q 012980 374 P-TEKITLADNPVAYLRANTSSLPHALTMHMMSYAGRADMQILVAKDIIP--DPELLAKCFEDSLLEMKE 440 (452)
Q Consensus 374 ~-~~~l~~~g~~v~~~~~~~~~~~~~l~v~v~s~~g~l~l~i~~d~~~~~--~~~~l~~~~~~~l~el~~ 440 (452)
. .....++|..+..+..........+.+.+...+|.+.+.+.++.+++. ..+.+.+.|...|.++..
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~dL~l~v~~~~~~l~~~~~y~~~lf~~~~i~~l~~~~~~lL~~i~~ 476 (5163)
T PRK12316 407 DIEALDTVAGLEFGQLEWKSRTTQFDLTLDTYEKGGRLHAALTYATDLFEARTVERMARHWQNLLRGMVE 476 (5163)
T ss_pred cccccccCCCceEEeeccCCCccceeEEEEEEEcCCcEEEEEEEchhhCCHHHHHHHHHHHHHHHHHHHh
Confidence 2 223345665555443222233567888888888999999999999996 345566666666665543
No 11
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.80 E-value=2.6e-17 Score=189.33 Aligned_cols=388 Identities=13% Similarity=0.083 Sum_probs=227.8
Q ss_pred CCccCChhhhccc-----CCCc-ceEEEEEEecCCCCChhHHHHHHHhhhcccCCCCceeeeeCCCCceeeee-cccCcc
Q 012980 5 PDEPLTPAGRLFL-----QPHM-NTIIHCVVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRE-TSVDID 77 (452)
Q Consensus 5 ~~~~L~~~d~~~~-----~~~~-~~~~~~~~~~~~~ld~~~l~~al~~~~~~~~p~lr~~~~~~~~g~p~w~~-~~~d~~ 77 (452)
...|||+.|+.+| .+.. ..++..++.++|.+|.+.|++|+...+. +|+.||+++... .|.+..+. +..++.
T Consensus 6 ~~~Pls~~Q~~lw~~~~~~~~~~~yn~~~~~~l~g~ld~~~l~~Al~~lv~-rh~~LRt~f~~~-~g~~~q~v~~~~~~~ 83 (1296)
T PRK10252 6 QHLPLVAAQPGIWMAEKLSPLPSAWSVAHYVELTGELDAPLLARAVVAGLA-EADTLRMRFTED-NGEVWQWVDPALTFP 83 (1296)
T ss_pred CCCCCCHHHHHHHHHHHhCCCCCceeeeEEEEEeCCCCHHHHHHHHHHHHH-hccceEEEEEcC-CCeEEEEECCCCCCC
Confidence 3569999999966 2333 3445567889999999999999999999 999999999875 56666544 433322
Q ss_pred c-cceee----CChhHHHHHHHhhhcCCCCCCCC--CCeEEEEEc---cceEEEEeecccccccccHHHHHHHhcccCCC
Q 012980 78 R-HFVEV----HDSTSVNDYVAGLSFSSPLSEDK--PLWEVHVLA---EHRCAVFRIHHALGDGISLVSMLLAGCRLADD 147 (452)
Q Consensus 78 ~-hv~~l----~~~~~l~~~~~~~~~~~pld~~~--PlW~~~lv~---~~~~l~~~~HH~l~DG~s~~~l~~~l~~~~~~ 147 (452)
. .+..+ ..++.+++++.+.... |||.+. |+||+.+++ +++.+++.+||.++||+|...++.+|...|..
T Consensus 84 ~~~~~d~~~~~~~~~~~~~~~~~~~~~-~fdl~~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~ 162 (1296)
T PRK10252 84 LPEIIDLRTQPDPHAAAQALMQADLQQ-DLRVDSGKPLVFHQLIQLGDNRWYWYQRYHHLLVDGFSFPAITRRIAAIYCA 162 (1296)
T ss_pred cCceeecCCCCCHHHHHHHHHHHHhcC-CcCCCCCCCCeEEEEEEEcCCEEEEEEecCceeEccccHHHHHHHHHHHHHH
Confidence 1 12222 2234566777777888 999875 999999998 67899999999999999999999988876621
Q ss_pred ---CCCCCCCCCC-CCCCCCC----ccchHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccCCCCCCCCCe-EEEEEee
Q 012980 148 ---PEALPAVAGG-KRTESAG----KIGSLWGLLKMVLLSIVFVLEFLLRALWVSDRKTAISGGAGVELWPR-KLATATF 218 (452)
Q Consensus 148 ---~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r-~~~~~~~ 218 (452)
....+..+.. ....... ..+......+.+|+... . . .+ .....+...+.......+ .-....+
T Consensus 163 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yW~~~L---~---~-~~-~~~~l~~~~~~~~~~~~~~~~~~~~~ 234 (1296)
T PRK10252 163 WLRGEPTPASPFTPFADVVEEYQRYRASEAWQRDAAFWAEQR---R---Q-LP-PPASLSPAPLPGRSASADILRLKLEF 234 (1296)
T ss_pred HhcCCCCCCCCCccHHHHHHHHHHHhhCchhhHHHHHHHHHh---c---C-CC-CcccCCCCCCCCccCCCcceeeeeec
Confidence 1111100100 0000000 00000111234454211 0 0 00 000001110100000011 1112334
Q ss_pred chHHHHHH-HHHccCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCcchhhhhhccCCCCCCCce
Q 012980 219 SIDDMKAV-KKAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTRWGNK 297 (452)
Q Consensus 219 ~~~~lk~~-a~~~~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~~~~~~~~~~~~~~~~~~~gN~ 297 (452)
+.+...++ +.+. |+|.+.+++||++..|++|..+ ..+.+++|++.|..... ....|-+
T Consensus 235 ~~~~~~~l~~~~~-~~~~~~~l~aa~~~lL~r~sg~---------~dv~ig~p~sgR~~~~~-----------~~~vG~f 293 (1296)
T PRK10252 235 TDGAFRQLAAQAS-GVQRPDLALALVALWLGRLCGR---------MDYAAGFIFMRRLGSAA-----------LTATGPV 293 (1296)
T ss_pred CHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHhCC---------CceEEEEEecCCCchhh-----------hcCCCcc
Confidence 43333333 2456 8999999999999999999743 37999999999976432 1345666
Q ss_pred EEEEEEEccCCCCC-CCHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHhHHHHHHHhcccccceeEEEeccCCCCc
Q 012980 298 FGMLLLPIYYHKGG-ADPLSYVKRAKKMIDSKKLTLEGHFSYKIGNLVMSWFGAKVACLLNYRIVCNTTFTISNIVGPTE 376 (452)
Q Consensus 298 ~~~~~~~l~~p~~~-~d~~~~l~~v~~~~~~~k~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~vSNv~g~~~ 376 (452)
+..+.+.+ ..+. .++.+.++++++.+....+++...+.. +.. .+... .....+++..+.+.|...
T Consensus 294 vntlplr~--~~~~~~tf~~~l~~~~~~~~~~~~h~~~p~~~-i~~----~l~~~----~~~~~lf~~~~~~~~~~~--- 359 (1296)
T PRK10252 294 LNVLPLRV--HIAAQETLPELATRLAAQLKKMRRHQRYDAEQ-IVR----DSGRA----AGDEPLFGPVLNIKVFDY--- 359 (1296)
T ss_pred cceEEEEE--ecCCCCCHHHHHHHHHHHHHHHHhhcCCCHHH-HHH----HhcCc----cCCCCceeEEEEeeeccc---
Confidence 65555555 3333 567889999999999888887754432 222 12211 011223444444444332
Q ss_pred ceeecCCeeeEEeeccCCCCceeEEEEE-eeCCeEEEEEEecCCCCC--CHHHHHHHHHHHHHHHH
Q 012980 377 KITLADNPVAYLRANTSSLPHALTMHMM-SYAGRADMQILVAKDIIP--DPELLAKCFEDSLLEMK 439 (452)
Q Consensus 377 ~l~~~g~~v~~~~~~~~~~~~~l~v~v~-s~~g~l~l~i~~d~~~~~--~~~~l~~~~~~~l~el~ 439 (452)
...+.|........ .......+.+.+. .-+|.+.+.+.++.+.+. ..+.+++.|.+.|.++.
T Consensus 360 ~~~~~~~~~~~~~~-~~~~~~dl~l~~~~~~~~~l~~~~~y~~~~f~~~~i~~l~~~~~~ll~~~~ 424 (1296)
T PRK10252 360 QLDFPGVQAQTHTL-ATGPVNDLELALFPDEHGGLSIEILANPQRYDEATLIAHAERLKALIAQFA 424 (1296)
T ss_pred ccCcCCccceeeec-CCCccCCeEEEEEECCCCcEEEEEEEChhhCCHHHHHHHHHHHHHHHHHHH
Confidence 23344443322211 1122236777776 346789999999999886 34556666666655554
No 12
>PRK05691 peptide synthase; Validated
Probab=99.79 E-value=1.3e-17 Score=208.15 Aligned_cols=389 Identities=12% Similarity=0.112 Sum_probs=237.0
Q ss_pred CccCChhhhccc-----CCCc-ceEEEEEEecCCCCChhHHHHHHHhhhcccCCCCceeeeeCCCCceeeee-cccCccc
Q 012980 6 DEPLTPAGRLFL-----QPHM-NTIIHCVVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRE-TSVDIDR 78 (452)
Q Consensus 6 ~~~L~~~d~~~~-----~~~~-~~~~~~~~~~~~~ld~~~l~~al~~~~~~~~p~lr~~~~~~~~g~p~w~~-~~~d~~~ 78 (452)
..|||+.|+.+| .+.. .+.+..++.++|.+|.++|++|+...+. +||.||++++.. .|.++.+. +..++..
T Consensus 1728 ~~pls~~Q~~l~~~~~~~~~~~~Yn~~~~~~l~g~ld~~~L~~A~~~lv~-rH~~LRT~f~~~-~~~~~q~v~~~~~~~~ 1805 (4334)
T PRK05691 1728 PVPLSYSQQRMWFLWQMEPDSPAYNVGGMARLSGVLDVDRFEAALQALIL-RHETLRTTFPSV-DGVPVQQVAEDSGLRM 1805 (4334)
T ss_pred CCCCCHHHHhHHHhhhccCCCcccceeeeehccCCCCHHHHHHHHHHHHH-hCCcceEEEEcc-CCeEEEEECCCCCCCe
Confidence 458999988855 2332 3334567889999999999999999999 999999999874 46666555 4333222
Q ss_pred cceee---CC---hhHHHHHHHhhhcCCCCCCC-CCCeEEEEEc---cceEEEEeecccccccccHHHHHHHhcccCCC-
Q 012980 79 HFVEV---HD---STSVNDYVAGLSFSSPLSED-KPLWEVHVLA---EHRCAVFRIHHALGDGISLVSMLLAGCRLADD- 147 (452)
Q Consensus 79 hv~~l---~~---~~~l~~~~~~~~~~~pld~~-~PlW~~~lv~---~~~~l~~~~HH~l~DG~s~~~l~~~l~~~~~~- 147 (452)
.+..+ .. .+.+.+++++.... |||.+ .|++|+.+++ +.+.+++.+||++.||+|...++.++...|..
T Consensus 1806 ~~~d~~~~~~~~~~~~~~~~~~~~~~~-~fdl~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~ll~~el~~~Y~~~ 1884 (4334)
T PRK05691 1806 DWQDFSALPADARQQRLQQLADSEAHQ-PFDLERGPLLRACLVKAAEREHYFVLTLHHIVTEGWAMDIFARELGALYEAF 1884 (4334)
T ss_pred eEeeccCCChHhHHHHHHHHHHHHHhc-CCCCCCCceeEEEEEEeCCCcEEEEEecchhhhhhhhHHHHHHHHHHHHHHH
Confidence 22221 11 23456677777788 99986 5999999998 57899999999999999999999988877621
Q ss_pred -CCCCCCCCCCCCCCCC---Cccc----hHHHHHHHHHHHHHHHHHHHHHhcccCCCC--CcccCCCCC-CCCCeEEEEE
Q 012980 148 -PEALPAVAGGKRTESA---GKIG----SLWGLLKMVLLSIVFVLEFLLRALWVSDRK--TAISGGAGV-ELWPRKLATA 216 (452)
Q Consensus 148 -~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~r~~~~~ 216 (452)
.+..+..+..+..... +... .-..-...+|.... .. ..+. .|...+... ..........
T Consensus 1885 ~~~~~~~~~~~~~~y~dy~~~~~~~l~~~~~~~~~~yW~~~L------~~----~~~~~~lp~~~~~~~~~~~~~~~~~~ 1954 (4334)
T PRK05691 1885 LDDRESPLEPLPVQYLDYSVWQRQWLESGERQRQLDYWKAQL------GN----EHPLLELPADRPRPPVQSHRGELYRF 1954 (4334)
T ss_pred hcCCCCCCCCCCCCHHHHHHHHHHHhcChhhHHHHHHHHHHh------cC----CCCcccCCCCCCCCcccCcCceEEEE
Confidence 1111111111110000 0000 00011223443211 00 0011 111111000 0001111222
Q ss_pred eec---hHHHHHHHHHccCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCcchhhhhhccCCCCC
Q 012980 217 TFS---IDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTR 293 (452)
Q Consensus 217 ~~~---~~~lk~~a~~~~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~~~~~~~~~~~~~~~~~~ 293 (452)
.++ .+.++++|+++ |+|++.+++||++..|++|..+ +.+.+++|++.|...+
T Consensus 1955 ~l~~~~~~~l~~~a~~~-~vT~~~~l~aA~a~lL~r~sg~---------~dvv~G~~vsgR~~~~--------------- 2009 (4334)
T PRK05691 1955 DLSPELAARVRAFNAQR-GLTLFMTMTATLAALLYRYSGQ---------RDLRIGAPVANRIRPE--------------- 2009 (4334)
T ss_pred ECCHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHHHHhcCC---------CCeEEEecccCCCchh---------------
Confidence 233 56789999999 9999999999999999999753 3799999999997532
Q ss_pred CCceEEEEEEEccCC--CCC-CCHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHhHHHHHHHhcccccceeEEEec
Q 012980 294 WGNKFGMLLLPIYYH--KGG-ADPLSYVKRAKKMIDSKKLTLEGHFSYKIGNLVMSWFGAKVACLLNYRIVCNTTFTISN 370 (452)
Q Consensus 294 ~gN~~~~~~~~l~~p--~~~-~d~~~~l~~v~~~~~~~k~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~vSN 370 (452)
..|.+|.+...+|++ ++. .++.+.++++++.+.....++...+.. +.. .+... +......+++..+.+.|
T Consensus 2010 ~~~~vG~fvntlPlrv~~~~~~t~~~ll~~v~~~~~~~~~hq~~p~~~-iv~----~l~~~--r~~~~~plf~~~~~~~~ 2082 (4334)
T PRK05691 2010 SEGLIGAFLNTQVLRCQLDGQMSVSELLEQVRQTVIEGQSHQDLPFDH-LVE----ALQPP--RSAAYNPLFQVMCNVQR 2082 (4334)
T ss_pred hhcceeeeeeeeeEEeecCCCCCHHHHHHHHHHHHHHHHhcccCCHHH-HHH----Hhccc--cccCCCCceEEEEEeec
Confidence 344555555555333 332 467899999999998888887754432 222 22211 01112334555556666
Q ss_pred cCCCCcceeecCCeeeEEeeccCCCCceeEEEEEeeCCeEEEEEEecCCCCC--CHHHHHHHHHHHHHHHHH
Q 012980 371 IVGPTEKITLADNPVAYLRANTSSLPHALTMHMMSYAGRADMQILVAKDIIP--DPELLAKCFEDSLLEMKE 440 (452)
Q Consensus 371 v~g~~~~l~~~g~~v~~~~~~~~~~~~~l~v~v~s~~g~l~l~i~~d~~~~~--~~~~l~~~~~~~l~el~~ 440 (452)
.+.. ....+.|..+.............+.+.+...++.+.+.+.++.+++. ..+.+.+.|...|.++.+
T Consensus 2083 ~~~~-~~~~~~~~~~~~~~~~~~~~~~dL~l~v~~~~~~l~l~~~y~~~lf~~~~i~~l~~~~~~~l~~~~~ 2153 (4334)
T PRK05691 2083 WEFQ-QSRQLAGMTVEYLVNDARATKFDLNLEVTDLDGRLGCCLTYSRDLFDEPRIARMAEHWQNLLEALLG 2153 (4334)
T ss_pred cccc-cccCCCCceeEeecccCCccccceEEEEEecCCcEEEEEEECcccCCHHHHHHHHHHHHHHHHHHHh
Confidence 5422 12234555544332211233457888888778999999999999987 355677777777766643
No 13
>PRK05691 peptide synthase; Validated
Probab=99.78 E-value=1.4e-17 Score=207.85 Aligned_cols=395 Identities=10% Similarity=-0.012 Sum_probs=234.6
Q ss_pred CCccCChhhhccc-----CCCcc-eEEEEEEecCCCCChhHHHHHHHhhhcccCCCCceeeeeCCCCceeeee-cccCcc
Q 012980 5 PDEPLTPAGRLFL-----QPHMN-TIIHCVVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRE-TSVDID 77 (452)
Q Consensus 5 ~~~~L~~~d~~~~-----~~~~~-~~~~~~~~~~~~ld~~~l~~al~~~~~~~~p~lr~~~~~~~~g~p~w~~-~~~d~~ 77 (452)
...|+||.|+.++ ++... +.+..++.+++++|.++|++|++..+. +||.||++|+....+.+..+. ...+..
T Consensus 3256 diyP~tp~Q~g~l~~~~~~~~~~~Y~~~~~~~l~~~ld~~~l~~Aw~~vv~-rh~~LRT~f~~~~~~~~~Qvv~~~~~~~ 3334 (4334)
T PRK05691 3256 DVYPLTPMQEGLLLHTLLEPGTGLYYMQDRYRINSALDPERFAQAWQAVVA-RHEALRASFSWNAGETMLQVIHKPGRTP 3334 (4334)
T ss_pred ccccCCHHHHhhhhhhccCCCCcccceeeEEEEcCCCCHHHHHHHHHHHHH-HhHHhheEeeecCCCCcEEEEccCCCCc
Confidence 4569999999966 23333 334567889999999999999999999 999999999876445565555 433332
Q ss_pred ccceee------CChhHHHHHHHhhhcCCCCCCC-CCCeEEEEEc---cceEEEEeecccccccccHHHHHHHhcccCCC
Q 012980 78 RHFVEV------HDSTSVNDYVAGLSFSSPLSED-KPLWEVHVLA---EHRCAVFRIHHALGDGISLVSMLLAGCRLADD 147 (452)
Q Consensus 78 ~hv~~l------~~~~~l~~~~~~~~~~~pld~~-~PlW~~~lv~---~~~~l~~~~HH~l~DG~s~~~l~~~l~~~~~~ 147 (452)
..+..+ ..++.+++++.+...+ +||.. .|++|+.+++ +++.+++.+||++.||||...++.++...|..
T Consensus 3335 ~~~~d~~~~~~~~~~~~l~~~~~~~~~~-~fdl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~DGwS~~ll~~dl~~~Y~~ 3413 (4334)
T PRK05691 3335 IDYLDWRGLPEDGQEQRLQALHKQEREA-GFDLLNQPPFHLRLIRVDEARYWFMMSNHHILIDAWCRSLLMNDFFEIYTA 3413 (4334)
T ss_pred eeEeecccCChhhhHHHHHHHHHHHHhC-CCCcCCCCcEEEEEEEecCcEEEEEEEehhhhhccccHHHHHHHHHHHHHH
Confidence 222221 2234577777777788 99986 5999999998 67889999999999999999999999887732
Q ss_pred C--CCCCCCCCC--CCCCCCCccchHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccC-CCCCCCC----CeEEEEEee
Q 012980 148 P--EALPAVAGG--KRTESAGKIGSLWGLLKMVLLSIVFVLEFLLRALWVSDRKTAISG-GAGVELW----PRKLATATF 218 (452)
Q Consensus 148 ~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~r~~~~~~~ 218 (452)
. ...+..+.+ ...........-..-.+.+|+...+ .+......+. ..|... ..+...+ .........
T Consensus 3414 ~~~g~~~~~~~~~~y~dyi~~l~~~~~~~~~~yW~~~L~---g~~~~~~lp~-~~~~~~~~~~~~~~~~~~~~~~~l~~~ 3489 (4334)
T PRK05691 3414 LGEGREAQLPVPPRYRDYIGWLQRQDLAQARQWWQDNLR---GFERPTPIPS-DRPFLREHAGDSGGMVVGDCYTRLDAA 3489 (4334)
T ss_pred hhCCCCCCCCCCCChHHHHHHHHhCcHHHHHHHHHHHhc---CCCccccCCc-CCcccccccccccccccceeEEecCHH
Confidence 1 111111111 1100000000001113355652211 0000000000 001100 0000000 001111222
Q ss_pred chHHHHHHHHHccCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCcchhhhhhccCCCCCCCceE
Q 012980 219 SIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTRWGNKF 298 (452)
Q Consensus 219 ~~~~lk~~a~~~~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~~~~~~~~~~~~~~~~~~~gN~~ 298 (452)
..+.+++.|+++ |+|++.++.+|++..|++|... +.+.++++++.|...- ..+.+.+
T Consensus 3490 ~~~~L~~~~~~~-~vT~~~vl~aawalvL~~ytg~---------~dVvfG~~~sGR~~~~-------------~gie~~v 3546 (4334)
T PRK05691 3490 DGARLRELAQAH-QLTVNTFAQAAWALVLRRYSGD---------RDVLFGVTVAGRPVSM-------------PQMQRTV 3546 (4334)
T ss_pred HHHHHHHHHHHh-CCCHHHHHHHHHHHHHHHhcCC---------CceEEEeccCCCCCCc-------------ccHHhHh
Confidence 346799999999 9999999999999999999743 4899999999997532 1334556
Q ss_pred EEEEEEccCCCCC------CCHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHhHHHHHHHhcccccceeEEEeccC
Q 012980 299 GMLLLPIYYHKGG------ADPLSYVKRAKKMIDSKKLTLEGHFSYKIGNLVMSWFGAKVACLLNYRIVCNTTFTISNIV 372 (452)
Q Consensus 299 ~~~~~~l~~p~~~------~d~~~~l~~v~~~~~~~k~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~vSNv~ 372 (452)
|.+...||+.++. ....+.|++++++......++...+. .+.. .... .....+++..+++.|.|
T Consensus 3547 G~fiNtlp~Rv~~~~~~~~~t~~~~L~~v~~~~~~~~~~q~~~l~-~i~~----~~~~-----~~~~~LF~t~~v~~n~~ 3616 (4334)
T PRK05691 3547 GLFINSIALRVQLPAAGQRCSVRQWLQGLLDSNMELREYEYLPLV-AIQE----CSEL-----PKGQPLFDSLFVFENAP 3616 (4334)
T ss_pred cccccccceEEeeCCccCCCcHHHHHHHHHHHHHHHhhccCCCHH-HHHH----HhcC-----CCCCCCccEEEEeecCC
Confidence 6666666333322 14577898888887777666553222 1221 1110 01224577778899987
Q ss_pred CCCccee-ecCCeeeEEeeccCCCCceeEEEEEeeCCeEEEEEEecCCCCC--CHHHHHHHHHHHHHHHHH
Q 012980 373 GPTEKIT-LADNPVAYLRANTSSLPHALTMHMMSYAGRADMQILVAKDIIP--DPELLAKCFEDSLLEMKE 440 (452)
Q Consensus 373 g~~~~l~-~~g~~v~~~~~~~~~~~~~l~v~v~s~~g~l~l~i~~d~~~~~--~~~~l~~~~~~~l~el~~ 440 (452)
....... ..+..+...... .....++++.+. -++.+.+.+.+|.+.+. ..+.+.+.|+..|..+..
T Consensus 3617 ~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~-~~~~l~~~l~y~~~~~~~~~~~~l~~~f~~~L~~l~~ 3685 (4334)
T PRK05691 3617 VEVSVLDRAQSLNASSDSGR-THTNFPLTAVCY-PGDDLGLHLSYDQRYFDAPTVERLLGEFKRLLLALVQ 3685 (4334)
T ss_pred cchhhhcccccccccccccc-cccCCCeEEEEe-cCCceEEEEEEchhhCCHHHHHHHHHHHHHHHHHHHh
Confidence 4321111 011111111110 123456666543 36789999999999887 356677777777777754
No 14
>PF00668 Condensation: Condensation domain; InterPro: IPR001242 This domain is found in many multi-domain enzymes which synthesize peptide antibiotics. This domain catalyses a condensation reaction to form peptide bonds in non-ribosomal peptide biosynthesis. It is usually found to the carboxy side of a phosphopantetheine binding domain (pp-binding). It has been shown that mutations in the HHXXXDG motif abolish activity suggesting this is part of the active site []. ; PDB: 2JGP_A 2VSQ_A 1L5A_A 2JUG_A 1Q9J_A.
Probab=99.78 E-value=2e-17 Score=159.11 Aligned_cols=265 Identities=18% Similarity=0.192 Sum_probs=152.2
Q ss_pred CCccCChhhhccc-----C-CCcceEEEEEEecCCCCChhHHHHHHHhhhcccCCCCceeeeeCCCCceeeee-cccCcc
Q 012980 5 PDEPLTPAGRLFL-----Q-PHMNTIIHCVVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRE-TSVDID 77 (452)
Q Consensus 5 ~~~~L~~~d~~~~-----~-~~~~~~~~~~~~~~~~ld~~~l~~al~~~~~~~~p~lr~~~~~~~~g~p~w~~-~~~d~~ 77 (452)
..-|||+.|+.++ . ....+.+..++.+++.+|.+.|++++...+. +||.||+++.....+.++... ...+..
T Consensus 3 ~~~plt~~Q~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~~l~~A~~~~~~-~h~~Lr~~~~~~~~~~~~~~~~~~~~~~ 81 (301)
T PF00668_consen 3 DVYPLTPAQQGIWLLQQLSPDSSSYNIAFVFELDGPIDIERLRQALERLIA-RHPILRTRFEEDDGFEPYQRVLESSSIE 81 (301)
T ss_dssp SCEE--HHHHHHHHHHHHSTTSTTTEEEEEEEEEES--HHHHHHHHHHHHH-H-GGGGEEEEECTTCSSEEEEESEEETT
T ss_pred CccCCHHHHHHHHHHhccCCCCCcEEEEEEEEecCccchHHHhhhhHhhhh-hhhhhhheeeeecccccceeeeeccccc
Confidence 4679999999432 2 3345555678899999999999999999999 999999999986322444444 322222
Q ss_pred ccceeeC----ChhHHHHHHHhhhcCCCCCCC-CCCeEEEEEc---cceEEEEeecccccccccHHHHHHHhcccCCCCC
Q 012980 78 RHFVEVH----DSTSVNDYVAGLSFSSPLSED-KPLWEVHVLA---EHRCAVFRIHHALGDGISLVSMLLAGCRLADDPE 149 (452)
Q Consensus 78 ~hv~~l~----~~~~l~~~~~~~~~~~pld~~-~PlW~~~lv~---~~~~l~~~~HH~l~DG~s~~~l~~~l~~~~~~~~ 149 (452)
.....+. ...+..+.+.+.... ++|.+ .|++++.+++ +++.+++.+||+++||+|...++.++.+.|.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~pl~~~~l~~~~~~~~~l~~~~hH~i~Dg~S~~~l~~~l~~~y~~~~ 160 (301)
T PF00668_consen 82 IEYIDVSSDSDSEEEILELIEQELNR-PFDLSEGPLFRFTLIRTSDDEYFLLISFHHIICDGWSLNILLRELLQAYAGLS 160 (301)
T ss_dssp CEEEECCTS-HHHHHHHHHHHHHHCC----TCTSBSEEEEEEEEETTEEEEEEEEEGGG--HHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccchhhhhhhhhhhhhh-cccccccchhhccccccccccchhcccccccccccccchhhhhhhHHhhhccc
Confidence 1112122 246777888888889 99986 5999999998 4789999999999999999999999998774322
Q ss_pred CCCCCCCCCCCCCCCcc--------chHHHHHHHHHHHHHHHHHHHHHhcccCCC--CCcccCC-CCCCCCCeEEEEEee
Q 012980 150 ALPAVAGGKRTESAGKI--------GSLWGLLKMVLLSIVFVLEFLLRALWVSDR--KTAISGG-AGVELWPRKLATATF 218 (452)
Q Consensus 150 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~r~~~~~~~ 218 (452)
. ..+....... ... .......+.+|... +....+ ..+...+ ..............+
T Consensus 161 ~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~W~~~----------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 227 (301)
T PF00668_consen 161 N--PLPAPSPSYK-DFVEFQREYRNSDRLQEARAFWREY----------LRGVPPAPSLPPDFPRPSIPSYSPSRISFSL 227 (301)
T ss_dssp T--T----S-BHH-HHHHHHHHHHTSHHHHHHHHHHHHH----------CCTS-----CTTTT--CSSBEEBEEEEEEE-
T ss_pred c--cccccccccc-ccccccccccccccccccccccccc----------ccccccccccccccccccccccccccccccc
Confidence 0 0111111000 000 00011122333311 111111 0111111 111000111222233
Q ss_pred ---chHHHHHHHHHccCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccC--CCcchhhhhhccCCCCC
Q 012980 219 ---SIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQ--PGLQDLSNLMKSNSGTR 293 (452)
Q Consensus 219 ---~~~~lk~~a~~~~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~--~~~~~~~~~~~~~~~~~ 293 (452)
....+++.|+.+ |+|++++++||++.+|++|... ..+.+++|++.|.. .+. ...
T Consensus 228 ~~~~~~~l~~~a~~~-~~t~~~~l~aa~~~~l~~~~~~---------~~~~i~~~~~~R~~~~~~~-----------~~~ 286 (301)
T PF00668_consen 228 SSELSKRLKEFAKQY-GVTPFAVLLAAFALALSRLTGQ---------DDVVIGTPVSGRPRSGPGF-----------SNT 286 (301)
T ss_dssp -HHHHHHHHHHHHHT-TS-HHHHHHHHHHHHHHHHHTT---------SEEEEEEEE---TTTSCGG-----------GGS
T ss_pred cchhhhhhhhhhhhh-cccchhhhhhhhhhhhhhcccc---------ceeeecccccCCCCCCcCh-----------hhC
Confidence 356788999999 9999999999999999999753 37999999999998 332 246
Q ss_pred CCceEEEEEEEc
Q 012980 294 WGNKFGMLLLPI 305 (452)
Q Consensus 294 ~gN~~~~~~~~l 305 (452)
.|+++..+.+.+
T Consensus 287 vG~~~~~~P~~i 298 (301)
T PF00668_consen 287 VGPFVNTLPVRI 298 (301)
T ss_dssp -SS--EEEEEEE
T ss_pred eeeEeEEEEEEE
Confidence 777777766555
No 15
>PLN02481 Omega-hydroxypalmitate O-feruloyl transferase
Probab=98.49 E-value=1.3e-05 Score=81.75 Aligned_cols=263 Identities=13% Similarity=0.003 Sum_probs=129.8
Q ss_pred CCccCChhhhcccCCCcceEEEEEEecCC----CCChhHHHHHHHhhhcccCCCCceeeeeCCCCceeeee-c-------
Q 012980 5 PDEPLTPAGRLFLQPHMNTIIHCVVGFER----PIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRE-T------- 72 (452)
Q Consensus 5 ~~~~L~~~d~~~~~~~~~~~~~~~~~~~~----~ld~~~l~~al~~~~~~~~p~lr~~~~~~~~g~p~w~~-~------- 72 (452)
...+||..|+.+ +.++..+.+|.... ....+.|+++|.+.+. .|+-|.-|++....|+++... +
T Consensus 31 ~~~~LS~lD~~~---~~~~~~~~fy~~~~~~~~~~~~~~Lk~sLs~~L~-~~~plAGRL~~~~~g~~~i~c~~~Gv~fve 106 (436)
T PLN02481 31 GLYFLSNLDQNI---AVIVRTVYCFKSEERGSNEDPVDVIKKALSKVLV-HYYPLAGRLTISSEGKLIVDCTGEGVVFVE 106 (436)
T ss_pred CceecCccccCc---ceeeeEEEEECCCCcccccCHHHHHHHHHHHHhc-cccCCCCeeeeCCCCcEEEEEcCCCeEEEE
Confidence 456777777743 12222333343321 1136889999999999 999999998764345554433 1
Q ss_pred ---ccCccccceee-CChhHHHHHHHhhhcCCCC--CC-CCCCeEEEEEc---cceEEEEeecccccccccHHHHHHHhc
Q 012980 73 ---SVDIDRHFVEV-HDSTSVNDYVAGLSFSSPL--SE-DKPLWEVHVLA---EHRCAVFRIHHALGDGISLVSMLLAGC 142 (452)
Q Consensus 73 ---~~d~~~hv~~l-~~~~~l~~~~~~~~~~~pl--d~-~~PlW~~~lv~---~~~~l~~~~HH~l~DG~s~~~l~~~l~ 142 (452)
+.+++++.... .+...+..++ ... |. +. ..|+.-+.+-. |+.+|.+.+||+++||.|+..++..+.
T Consensus 107 a~~d~~l~~l~~~~~p~~~~~~~l~---~~~-~~~~~~~~~Pll~vQvT~F~~GG~~lg~~~~H~v~Dg~g~~~fl~~WA 182 (436)
T PLN02481 107 AEANCSIEEIGDITKPDPETLGKLV---YDV-PGAKNILEIPPLTAQVTRFKCGGFVLGLCMNHCMFDGIGAMEFVNSWG 182 (436)
T ss_pred EEecCcHHHhccccCCCCHHHHHhC---CCC-CCcccccccceeeeccceEecCcEEEEEEeccccccHHHHHHHHHHHH
Confidence 11111110000 0011222221 111 11 11 24665555533 889999999999999999999998766
Q ss_pred ccCCC-CCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHhcccCCCC-CcccCCCCCCCCCeEEEEEeech
Q 012980 143 RLADD-PEALPAVAGGKRTESAGKIGSLWGLLKMVLLSIVFVLEFLLRALWVSDRK-TAISGGAGVELWPRKLATATFSI 220 (452)
Q Consensus 143 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~ 220 (452)
+.... +...+ |.-.+...... .... ....+. +. ....... .....+... ...+.+......+
T Consensus 183 ~~~rg~~~~~~--p~~dr~~l~~~--~pp~-~~~~~~---~~-------~~~~~~~~~~~~~~~~~-~~~~~f~fs~~~i 246 (436)
T PLN02481 183 ETARGLPLSVP--PFLDRSILRAR--NPPK-IEFPHQ---EF-------AEIEDVSGTSKLYDDEE-LVYKSFCFDPEKL 246 (436)
T ss_pred HHhcCCCCCCC--CCcCcccCCCC--CCCC-CCcCcc---cc-------ccccCCccccccccccC-ceEEEEEECHHHH
Confidence 54321 11110 00000000000 0000 000000 00 0000000 000000000 0023344444456
Q ss_pred HHHHHHHHHc---cCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCcchhhhhhccCCCCCCCce
Q 012980 221 DDMKAVKKAI---AGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTRWGNK 297 (452)
Q Consensus 221 ~~lk~~a~~~---~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~~~~~~~~~~~~~~~~~~~gN~ 297 (452)
+.+|+.+... +.+|-+|++.|.+-.++.+-... .......+..+||+|+...+. + +...+||.
T Consensus 247 ~~LK~~a~~~~~~~~~S~~dal~A~iW~~~~rA~~~------~~~~~~~l~~~vd~R~rl~Pp-l-------p~~Y~GN~ 312 (436)
T PLN02481 247 EKLKSMALEDGVIKKCSTFEALTAFVWRARTKALKM------LPDQQTKLLFAVDGRSRFNPP-L-------PKGYFGNG 312 (436)
T ss_pred HHHHHhcccccCCCCcChHHHHHHHHHHHHHhccCC------CCCCeEEEEEEEcCccCCCCC-C-------CCCceeee
Confidence 6666655433 03789999999988776654321 122478889999999875421 0 24568888
Q ss_pred EEEEEEEc
Q 012980 298 FGMLLLPI 305 (452)
Q Consensus 298 ~~~~~~~l 305 (452)
+......+
T Consensus 313 v~~~~~~~ 320 (436)
T PLN02481 313 IVLTNALT 320 (436)
T ss_pred eeeccccc
Confidence 77666555
No 16
>PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes. These include anthranilate N-hydroxycinnamoyl/benzoyltransferase that catalyzes the first committed reaction of phytoalexin biosynthesis []. Deacetylvindoline 4-O-acetyltransferase (2.3.1.107 from EC) catalyzes the last step in vindoline biosynthesis is also a member of this family []. The motif HXXXD is probably part of the active site. The family also includes trichothecene 3-O-acetyltransferase.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 2BGH_B 2E1U_B 2E1T_A 2E1V_A 2XR7_A 3B30_A 2RKT_A 3B2S_A 2RKV_A 2ZBA_C ....
Probab=98.43 E-value=5.9e-06 Score=84.15 Aligned_cols=260 Identities=15% Similarity=0.103 Sum_probs=126.4
Q ss_pred CccCChhhh-cccCCCcceEEEEEEecCCCCC----hhHHHHHHHhhhcccCCCCceeeeeCCCCceeeeecccCccccc
Q 012980 6 DEPLTPAGR-LFLQPHMNTIIHCVVGFERPID----VPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRETSVDIDRHF 80 (452)
Q Consensus 6 ~~~L~~~d~-~~~~~~~~~~~~~~~~~~~~ld----~~~l~~al~~~~~~~~p~lr~~~~~~~~g~p~w~~~~~d~~~hv 80 (452)
..+||+.|. ++.. .++..+.+|..+...+ .+.|+++|.+.+. .||-|.-|+ ....|++.....+- . |
T Consensus 21 ~~~LS~lD~~~~~~--~~~~~~~~y~~~~~~~~~~~~~~Lk~sLs~~L~-~~~~lAGrl-~~~~~~~~i~c~d~--G--v 92 (432)
T PF02458_consen 21 TLPLSNLDLQLMPP--YYVPVLLFYRPPSSSDDSDIVDNLKESLSKTLV-HYYPLAGRL-RDPDGRLEIDCNDD--G--V 92 (432)
T ss_dssp EEE--HHHHHCCGC--SEEEEEEEEE--SSCHHHHHHHHHHHHHHHHHT-TSGGGGSEE-ESSCTTTEEEECTT--T--E
T ss_pred cccCchhhcCcccc--cEEEEEEEecCccccccchHHHHHHHHHHHhHh-hCcccCcEE-cccccceEEEEecC--C--C
Confidence 668999994 4322 3343444555433322 4789999999999 999999999 43234443322110 1 1
Q ss_pred ee-e-CChhHHHHHH---------HhhhcCCCCCC---CCCCeEEEEEc---cceEEEEeecccccccccHHHHHHHhcc
Q 012980 81 VE-V-HDSTSVNDYV---------AGLSFSSPLSE---DKPLWEVHVLA---EHRCAVFRIHHALGDGISLVSMLLAGCR 143 (452)
Q Consensus 81 ~~-l-~~~~~l~~~~---------~~~~~~~pld~---~~PlW~~~lv~---~~~~l~~~~HH~l~DG~s~~~l~~~l~~ 143 (452)
.. . ..+..+.++. ..+....++.. +.|+..+.+-. |+.+|.+.+||+++||.|+..++..+..
T Consensus 93 ~f~~a~~~~~l~~~~~~~~~~~~~~~l~p~~~~~~~~~~~Pll~vQvt~f~~GG~~lg~~~~H~v~Dg~~~~~fl~~wa~ 172 (432)
T PF02458_consen 93 EFVEAEADGTLDDLLDLEPPSEFLRDLVPQLPVSSEGEDAPLLAVQVTRFKCGGLALGVSFHHAVADGTGFSQFLKAWAE 172 (432)
T ss_dssp EEEEEEESS-HHHHCSSSCCGGGGGGGSSS-SSSEEETTEBSEEEEEEEETTTEEEEEEEEETTT--HHHHHHHHHHHHH
T ss_pred EEEEEecccceeeccccccchHHHHHHhhhcccCCcccccceeEeeeeeecccceeeeeeceeccCcccchhHHHHHHHh
Confidence 11 0 1111122221 11211102221 24787777654 7799999999999999999999987655
Q ss_pred cCCCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHhcc-cCCCCCcccCCCCCCCCCeEEEEEeechHH
Q 012980 144 LADDPEALPAVAGGKRTESAGKIGSLWGLLKMVLLSIVFVLEFLLRALW-VSDRKTAISGGAGVELWPRKLATATFSIDD 222 (452)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 222 (452)
...........|.-.+...... ..... .+ .... ...+..... .......+.+.....+.+.
T Consensus 173 ~~rg~~~~~~~p~~~r~~~~~~--~~p~~------------~~--~~~~~~~~~~~~~~--~~~~~~~~~~~f~~~~~~~ 234 (432)
T PF02458_consen 173 ICRGGSPPSPPPVFDRSLLLPP--NPPSV------------SF--PPSEFEPFPPEPAP--PSSKCVSKTFVFSKLSIEK 234 (432)
T ss_dssp HHHTTCHHHHHHCHSSTTSS-S--TTHHH------------GC--TCSCHTTC--TTS-----SSEEEEEEEEEHHHHHH
T ss_pred hhcCCcccccccccchHHhhhc--cCccc------------cc--cccccccccccccc--cccccccceeeecccHHHH
Confidence 3311111000010000000000 00000 00 0000 000000000 0000002233444556888
Q ss_pred HHHHHHHcc-----CC-chhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCcchhhhhhccCCCCCCCc
Q 012980 223 MKAVKKAIA-----GA-TINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTRWGN 296 (452)
Q Consensus 223 lk~~a~~~~-----g~-TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~~~~~~~~~~~~~~~~~~~gN 296 (452)
|++.+.... +. |-||+++|.+-.++.+-..... .....+.++||+|+..... -+....||
T Consensus 235 l~~lk~~~~~~~~~~~~St~d~l~A~lWr~~~rar~~~~------~~~~~l~~~vd~R~rl~pp--------lp~~Y~GN 300 (432)
T PF02458_consen 235 LKKLKSEALSSSSGKPVSTFDALTALLWRCITRARGLPS------DETSRLSFAVDCRKRLNPP--------LPEGYFGN 300 (432)
T ss_dssp HHHHHHHHSTTTSTT-S-HHHHHHHHHHHHHHHHHCHTT------TTCEEEEEEEETHHHSSS-----------TTB-S-
T ss_pred HHHHhhccccccCCCCCCeeEEEEEehhhhhcccccccc------ccccccccccccCCCcCCC--------cceeecCc
Confidence 888766532 12 8999999998888876554322 2358999999999875421 03468999
Q ss_pred eEEEEEEEc
Q 012980 297 KFGMLLLPI 305 (452)
Q Consensus 297 ~~~~~~~~l 305 (452)
.+.......
T Consensus 301 ~~~~~~~~~ 309 (432)
T PF02458_consen 301 AVFFAFASA 309 (432)
T ss_dssp -EEEEEEEE
T ss_pred eEeeccccc
Confidence 998888777
No 17
>PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase
Probab=98.42 E-value=3.9e-05 Score=78.12 Aligned_cols=263 Identities=15% Similarity=0.057 Sum_probs=133.0
Q ss_pred CCCccCChhhhcccCCCcceEEEEEEecCC---CCChhHHHHHHHhhhcccCCCCceeeeeCCCCceeeeecccCccccc
Q 012980 4 HPDEPLTPAGRLFLQPHMNTIIHCVVGFER---PIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRETSVDIDRHF 80 (452)
Q Consensus 4 ~~~~~L~~~d~~~~~~~~~~~~~~~~~~~~---~ld~~~l~~al~~~~~~~~p~lr~~~~~~~~g~p~w~~~~~d~~~hv 80 (452)
++..+||-+|+.+ +..++..+.+|.... ..|.+.|+++|.+.+. .|..|.-|++....|.++...++ + =+
T Consensus 19 ~~~~~LS~lD~~~--~~~~~~~v~fY~~~~~~~~~~~~~Lk~sLs~~L~-~~yplaGRl~~~~~g~~~i~c~~-~---Gv 91 (431)
T PLN02663 19 RRGLWNSNVDLVV--PRFHTPSVYFYRPTGASNFFDPQVMKEALSKALV-PFYPMAGRLRRDEDGRIEIDCNA-E---GV 91 (431)
T ss_pred CCcccCChhhccc--ccccccEEEEEcCCCCCCccCHHHHHHHHHHHHh-hccccceeeeECCCCCEEEEECC-C---Cc
Confidence 3466788888754 234444444554322 2467899999999999 88889999886534555533321 0 11
Q ss_pred eee-----CChhHHHH-----HHHhhhcCCCCC---CCCCCeEEEEEc---cceEEEEeecccccccccHHHHHHHhccc
Q 012980 81 VEV-----HDSTSVND-----YVAGLSFSSPLS---EDKPLWEVHVLA---EHRCAVFRIHHALGDGISLVSMLLAGCRL 144 (452)
Q Consensus 81 ~~l-----~~~~~l~~-----~~~~~~~~~pld---~~~PlW~~~lv~---~~~~l~~~~HH~l~DG~s~~~l~~~l~~~ 144 (452)
.++ .+-+++.+ ...++.-..+.. .+.|+..+.+-. |+.+|.+.+||+++||.|+.+++......
T Consensus 92 ~fv~A~~~~~l~~~~~~~~~~~~~~l~P~~~~~~~~~~~P~l~vQvt~F~cGG~~lg~~~~H~v~Dg~g~~~fl~awa~~ 171 (431)
T PLN02663 92 LFVEADTPSVIDDFGDFAPTLELRQLIPTVDYSGGISSYPLLVLQVTHFKCGGVSLGVGMQHHAADGFSGLHFINTWSDM 171 (431)
T ss_pred eEEEEecCCCHHHhhccCCCHHHHhhcCCCCCccccccCceEEEEEEEeccCCEEEEEEecccccchHHHHHHHHHHHHH
Confidence 110 11111111 111222110111 235887777654 89999999999999999999999876553
Q ss_pred CCC-CCCCCCCCCCCCCC---CCCccchHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccCCCCCCCCCeEEEEEeech
Q 012980 145 ADD-PEALPAVAGGKRTE---SAGKIGSLWGLLKMVLLSIVFVLEFLLRALWVSDRKTAISGGAGVELWPRKLATATFSI 220 (452)
Q Consensus 145 ~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 220 (452)
... +...+ |.-.+.. ..+....+. .. .. ....................+.+....-.+
T Consensus 172 ~rg~~~~~~--p~~dr~~l~~~~p~~~~~~-----------~~-~~----~~~~~~~~~~~~~~~~~~~~~~f~fs~~~i 233 (431)
T PLN02663 172 ARGLDLTIP--PFIDRTLLRARDPPQPAFH-----------HV-EY----QPPPSMKTPLETSKPENTTVSIFKLTRDQL 233 (431)
T ss_pred hcCCCCCCC--CccCccccCCCCCCCCCcc-----------cc-cc----cCCCccccccccCCCCCceEEEEEECHHHH
Confidence 321 11111 0000000 000000000 00 00 000000000000000000022233333334
Q ss_pred HHHHHHHHHc---cCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCcchhhhhhccCCCCCCCce
Q 012980 221 DDMKAVKKAI---AGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTRWGNK 297 (452)
Q Consensus 221 ~~lk~~a~~~---~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~~~~~~~~~~~~~~~~~~~gN~ 297 (452)
+++|+.+... ..+|-+|++.|.+-..+.+-... +......+..+||+|+...+. + +...+||.
T Consensus 234 ~~LK~~~~~~~~~~~~S~~dalsA~lW~~~~rA~~~------~~~~~~~~~~~vd~R~rl~p~-l-------p~~Y~GN~ 299 (431)
T PLN02663 234 NTLKAKSKEDGNTISYSSYEMLAGHVWRSACKARGL------PDDQETKLYIATDGRSRLRPQ-L-------PPGYFGNV 299 (431)
T ss_pred HHHHhhCcccCCCcccchHHHHHHHHHhhhhhcccC------CCccceEEEEEecCCcCCCCC-C-------CCCcccce
Confidence 5555544322 03789999988877766554422 222478899999999876521 0 24678998
Q ss_pred EEEEEEEc
Q 012980 298 FGMLLLPI 305 (452)
Q Consensus 298 ~~~~~~~l 305 (452)
+.......
T Consensus 300 ~~~~~~~~ 307 (431)
T PLN02663 300 IFTATPIA 307 (431)
T ss_pred EEeccccc
Confidence 77665444
No 18
>PLN00140 alcohol acetyltransferase family protein; Provisional
Probab=98.20 E-value=0.00017 Score=73.57 Aligned_cols=257 Identities=11% Similarity=0.004 Sum_probs=127.9
Q ss_pred cCChhhhcccCCCcceEEEEEEecCCC--C----ChhHHHHHHHhhhcccCCCCceeeeeC-----CCCceeeee--ccc
Q 012980 8 PLTPAGRLFLQPHMNTIIHCVVGFERP--I----DVPKSKDAVMSSIMVRHPRFRSVLVRD-----KRGLEHWRE--TSV 74 (452)
Q Consensus 8 ~L~~~d~~~~~~~~~~~~~~~~~~~~~--l----d~~~l~~al~~~~~~~~p~lr~~~~~~-----~~g~p~w~~--~~~ 74 (452)
+||.+|+... ..++..+..|..... . ..+.|+++|.+.+. .|+-|.-|+... ...+-.+++ .+.
T Consensus 25 ~LS~lD~~~~--~~~~~~~~fY~~~~~~~~~~~~~~~~Lk~sLs~~L~-~fyplAGRl~~~~~i~cn~~Gv~fveA~~~~ 101 (444)
T PLN00140 25 KLSLLDQLTP--TTYIPMIFFYPTNNNQNFKGLQISIQLKRSLSETLS-TFYPFSGRVKDNLIIDNYEEGVPFFETRVKG 101 (444)
T ss_pred CCChHHhccc--ccccceEEEeeCCCcccccchhHHHHHHHHHHHHHh-hhhccCccccCCceeEccCCCceEEEEEecC
Confidence 5788886532 233333444544221 1 13889999999999 887777777652 122333444 333
Q ss_pred CccccceeeCChhHHHHHHHhhhcCCCC----C-CCCCCeEEEEEc---cceEEEEeecccccccccHHHHHHHhcccCC
Q 012980 75 DIDRHFVEVHDSTSVNDYVAGLSFSSPL----S-EDKPLWEVHVLA---EHRCAVFRIHHALGDGISLVSMLLAGCRLAD 146 (452)
Q Consensus 75 d~~~hv~~l~~~~~l~~~~~~~~~~~pl----d-~~~PlW~~~lv~---~~~~l~~~~HH~l~DG~s~~~l~~~l~~~~~ 146 (452)
++++.+.. .+...+ .++....+. + .+.|+..+.+-. |+.+|.+.+||+++||.|+..++..+.+...
T Consensus 102 ~l~d~l~~-~~~~~~----~~l~p~~~~~~~~~~~~~Pll~vQvT~F~cGG~~lG~~~~H~v~Dg~s~~~Fl~~WA~~~r 176 (444)
T PLN00140 102 SLSDFLKH-PQLELL----NKFLPCQPFSYESDPEAIPQVAIQVNTFDCGGIALGLCFSHKIIDAATASAFLDSWAANTR 176 (444)
T ss_pred cHHHhcCC-CCHHHH----HhhCCCCcccccCCccCCceEEEEEEEeccCcEEEEeeeceEcccHHHHHHHHHHHHHHhc
Confidence 34332110 111222 233321021 1 124766555444 8999999999999999999999987665432
Q ss_pred CCCCCCCCCCCCCC-CCCCccchHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccCCCCCCCCCeEEEEEeechHHHHH
Q 012980 147 DPEALPAVAGGKRT-ESAGKIGSLWGLLKMVLLSIVFVLEFLLRALWVSDRKTAISGGAGVELWPRKLATATFSIDDMKA 225 (452)
Q Consensus 147 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~lk~ 225 (452)
........|.-.+. ...+....+.. .... ... ..... + .. .-.+++....-.++.+|+
T Consensus 177 g~~~~~~~P~~dr~~~~~p~~~~~~~---~~~~-------------~~~--~~~~~-~-~~-~v~~~f~fs~~~I~~LK~ 235 (444)
T PLN00140 177 GHYSEVINPDLFEASSFFPPLNSFPV---QFLL-------------LME--ENWFF-K-EN-YITKRFVFDAKAIATLRA 235 (444)
T ss_pred CCCCCCCCcccccccccCCCCCcccc---cccc-------------ccc--ccccc-c-Cc-eEEEEEEECHHHHHHHHH
Confidence 21110000100000 00000000000 0000 000 00000 0 00 002334444444555555
Q ss_pred HHHHc--cCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCcchhhhhhccCCCCCCCceEEEEEE
Q 012980 226 VKKAI--AGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTRWGNKFGMLLL 303 (452)
Q Consensus 226 ~a~~~--~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~ 303 (452)
.+... +.+|-++++.|.+-.++.+-..... +......+.++||+|+...+. + +....||.+.....
T Consensus 236 ~~~~~~~~~~S~~e~vsA~iWr~~~rA~~~~~----~~~~~~~~~~~vn~R~Rl~Pp-L-------P~~y~GN~i~~~~~ 303 (444)
T PLN00140 236 KAKSKRVPNPSRIETLSCFIWKCCTAASRSIS----AAPRPSISVHAVNIRQRTKPP-M-------SRYSIGNLFWWALA 303 (444)
T ss_pred hcccccCCCCchhHHHHHHHHHHHHHHhhhcc----CCCCceEEEEEEeccccCCCC-C-------Ccccccchhhhhee
Confidence 54432 1478899998888777665543221 112367788999999876421 0 34678999876665
Q ss_pred Ec
Q 012980 304 PI 305 (452)
Q Consensus 304 ~l 305 (452)
..
T Consensus 304 ~~ 305 (444)
T PLN00140 304 AA 305 (444)
T ss_pred cc
Confidence 55
No 19
>PLN03157 spermidine hydroxycinnamoyl transferase; Provisional
Probab=98.19 E-value=0.00073 Score=69.17 Aligned_cols=265 Identities=14% Similarity=0.054 Sum_probs=128.8
Q ss_pred CCccCChhhhcccCCCcceEEEEEEecCC--C-CC-hhHHHHHHHhhhcccCCCCceeeeeCCCCceeeeec--------
Q 012980 5 PDEPLTPAGRLFLQPHMNTIIHCVVGFER--P-ID-VPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRET-------- 72 (452)
Q Consensus 5 ~~~~L~~~d~~~~~~~~~~~~~~~~~~~~--~-ld-~~~l~~al~~~~~~~~p~lr~~~~~~~~g~p~w~~~-------- 72 (452)
+..+||.+|+.+. ..++..+..|.-+. . .+ .+.|+++|.+.+. .|+-|.=|+.....|+++-...
T Consensus 20 ~~~~LS~lD~~~~--~~~v~~v~fy~~~~~~~~~~~~~~Lk~sLs~~L~-~fyplAGRl~~~~~g~~~i~c~~~Gv~fve 96 (447)
T PLN03157 20 GRRSLSEWDQVGT--ITHVPTIYFYSPPWNTSSGSIIEILKDSLSRALV-PFYPLAGRLRWIGGGRLELECNAMGVLLIE 96 (447)
T ss_pred CccCCChhhhccc--cccCCEEEEEeCCCccccccHHHHHHHHHHHHHh-hccccCEEEEEcCCCcEEEEECCCCeEEEE
Confidence 3567888887542 33443444443211 1 12 5889999999999 8888888887542334333221
Q ss_pred ---ccCccccceeeCChhHHHHHHHhhhcCCCCC---CCCCCeEEEE--Ec-cceEEEEeecccccccccHHHHHHHhcc
Q 012980 73 ---SVDIDRHFVEVHDSTSVNDYVAGLSFSSPLS---EDKPLWEVHV--LA-EHRCAVFRIHHALGDGISLVSMLLAGCR 143 (452)
Q Consensus 73 ---~~d~~~hv~~l~~~~~l~~~~~~~~~~~pld---~~~PlW~~~l--v~-~~~~l~~~~HH~l~DG~s~~~l~~~l~~ 143 (452)
+.++++... ......+.+ +.-..+.. .+.|+..+.+ +. |+.+|.+.+||+++||.|+..++....+
T Consensus 97 A~~~~~l~~~~~-~~~~~~~~~----l~P~~~~~~~~~~~Pll~vQvT~F~cGG~~lg~~~~H~v~Dg~~~~~fl~aWA~ 171 (447)
T PLN03157 97 AESEAKLDDFGD-FSPTPEFEY----LIPSVDYTKPIHELPLLLVQLTKFSCGGISLGLGISHAVADGQSALHFISEWAR 171 (447)
T ss_pred EEeCCcHHHhhc-cCCCHHHHh----hcCCCCcccccccCceEEEEEEEecCCCEEEEEEeeccccchHhHHHHHHHHHH
Confidence 111111000 011112222 22110111 1357776665 34 8899999999999999999999986655
Q ss_pred cCC-CCCCCCCCCCCCCCCC---CCccchHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccCCCCCCCCCeEEEEEeec
Q 012980 144 LAD-DPEALPAVAGGKRTES---AGKIGSLWGLLKMVLLSIVFVLEFLLRALWVSDRKTAISGGAGVELWPRKLATATFS 219 (452)
Q Consensus 144 ~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 219 (452)
... .+...++. -.+... .+.... ..+. .. .+.........+ ......... ...+.+....-.
T Consensus 172 ~~rg~~~~~~P~--~dR~~l~~~~~p~~~-~~~~---~~------~~~~~~~~~~~~-~~~~~~~~~-~~~~~f~fs~~~ 237 (447)
T PLN03157 172 IARGEPLGTVPF--LDRKVLRAGEPPLSA-PVFD---HA------EFSHPPLLIGEQ-DNVEERKKK-TTVAMLKLSKDQ 237 (447)
T ss_pred HhcCCCCCCCCc--cCcccccCCCCCCcC-CccC---hh------hcccCccccccc-ccccccccC-ceEEEEEECHHH
Confidence 332 22111111 000000 000000 0000 00 000000000000 000000000 001233333334
Q ss_pred hHHHHHHHHHc------cCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCcchhhhhhccCCCCC
Q 012980 220 IDDMKAVKKAI------AGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTR 293 (452)
Q Consensus 220 ~~~lk~~a~~~------~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~~~~~~~~~~~~~~~~~~ 293 (452)
++.+|+.+... +.+|-+|++.|-+-..+.+-.... + .....+..+||+|+...+. + +...
T Consensus 238 i~~LK~~a~~~~~~~~~~~~St~dalsA~lWr~~~rAr~~~-----~-~~~~~l~~~vd~R~rl~Pp-l-------p~~Y 303 (447)
T PLN03157 238 VEKLKDKANESRSSDNGRPYTRYETVAGHVWRSACKARGHE-----P-EQPTALGICVDSRSRMQPP-L-------PDGY 303 (447)
T ss_pred HHHHHHhCcccccccCCCCccHHHHHHHHHHHHHHHHccCC-----C-CCceEEEEEecCCCCCCCC-C-------CCCc
Confidence 45555544321 036889999998877776654321 2 2478899999999876521 0 3467
Q ss_pred CCceEEEEEEEc
Q 012980 294 WGNKFGMLLLPI 305 (452)
Q Consensus 294 ~gN~~~~~~~~l 305 (452)
.||.+.......
T Consensus 304 ~GN~v~~~~~~~ 315 (447)
T PLN03157 304 FGNATLDVIAES 315 (447)
T ss_pred ccceeeeccchh
Confidence 899987665544
No 20
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.33 E-value=0.12 Score=55.31 Aligned_cols=94 Identities=14% Similarity=0.003 Sum_probs=70.7
Q ss_pred HHHHHHHHHccCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCcchhhhhhccCCCCCCCceEEE
Q 012980 221 DDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTRWGNKFGM 300 (452)
Q Consensus 221 ~~lk~~a~~~~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~~~~~~~~~~~~~~~~~~~gN~~~~ 300 (452)
+.+++.++.+ |+|++.+++|+++..+++|..+ ..+.+++|+..|..... ...+.++.
T Consensus 7 ~~l~~~~~~~-~~t~~~~l~a~~~~~l~r~~~~---------~~~~~g~~~~~r~~~~~-------------~~~~~ig~ 63 (642)
T COG1020 7 AALRALAAEH-GLTLFMVLLAAFAALLSRWSGQ---------EDIVLGLPVAGRPLALP-------------DVEQLIGL 63 (642)
T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHHHHHHhCCC---------CCEEEeeeecCCCcccc-------------chHhhccc
Confidence 4589999999 9999999999999999998643 37889999888865331 23455555
Q ss_pred EEEEccCCCCC---CCHHHHHHHHHHHHHHhhhccchhhh
Q 012980 301 LLLPIYYHKGG---ADPLSYVKRAKKMIDSKKLTLEGHFS 337 (452)
Q Consensus 301 ~~~~l~~p~~~---~d~~~~l~~v~~~~~~~k~~~~~~~~ 337 (452)
+...+++..+. ..+.+.+.++++.+.....++.....
T Consensus 64 f~n~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~h~~~p~~ 103 (642)
T COG1020 64 FANTLPLRLDISGRVTFAELLARLRELALGALEHQDLPGE 103 (642)
T ss_pred hheeeeeeeccCCCCCHHHHHHHHHHHHHHHhhccCCCHH
Confidence 55555333333 35799999999999999888876543
No 21
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=95.75 E-value=0.68 Score=54.56 Aligned_cols=156 Identities=10% Similarity=0.060 Sum_probs=96.7
Q ss_pred HHccCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCcchhhhhhccCCCCCCCceEEEEEEEccC
Q 012980 228 KAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTRWGNKFGMLLLPIYY 307 (452)
Q Consensus 228 ~~~~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~l~~ 307 (452)
+++ |+|.+.+++||++..|++|..+ .++.+++|++.|. |. +.+++
T Consensus 42 ~~~-~~t~~~~l~aa~~~lL~r~sg~---------~dv~iG~~~~~R~--------------------~~---lplr~-- 86 (1389)
T TIGR03443 42 AGG-GSTPFIILLAAFAALVYRLTGD---------EDIVLGTSSNKSG--------------------RP---FVLRL-- 86 (1389)
T ss_pred hhc-CCCHHHHHHHHHHHHHHHHcCC---------CceEEEeeeCCCC--------------------ce---EEEEe--
Confidence 888 9999999999999999999754 3799999998773 11 22333
Q ss_pred CCCC-CCHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHhHHHHHHHhc-ccccceeEEEeccCCCCcceeecCCee
Q 012980 308 HKGG-ADPLSYVKRAKKMIDSKKLTLEGHFSYKIGNLVMSWFGAKVACLLNY-RIVCNTTFTISNIVGPTEKITLADNPV 385 (452)
Q Consensus 308 p~~~-~d~~~~l~~v~~~~~~~k~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~vSNv~g~~~~l~~~g~~v 385 (452)
..+. .++.+.++++++++.....++...+.. +.. .+... +...+ ..++ .+.+.+.+....
T Consensus 87 ~~~~~~t~~~~l~~~~~~~~~~~~h~~~p~~~-i~~----~l~~~--~~~~~~p~lf--~~~~~~~~~~~~--------- 148 (1389)
T TIGR03443 87 NITPELSFLQLYAKVSEEEKEGASDIGVPFDE-LSE----HIQAA--KKLERTPPLF--RLAFQDAPDNQQ--------- 148 (1389)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHhcccCCHHH-HHH----Hhccc--cCCCCCCccE--EEEeecCCcccc---------
Confidence 2232 567999999999999999888754433 332 12111 00101 1122 223332221110
Q ss_pred eEEeeccCCCCceeEEEEEeeCCeEEEEEEecCCCCCC--HHHHHHHHHHHHHHHH
Q 012980 386 AYLRANTSSLPHALTMHMMSYAGRADMQILVAKDIIPD--PELLAKCFEDSLLEMK 439 (452)
Q Consensus 386 ~~~~~~~~~~~~~l~v~v~s~~g~l~l~i~~d~~~~~~--~~~l~~~~~~~l~el~ 439 (452)
..+ .......+++.+.-.++.+.+.+.++.++++. .+.+.+.|...|+++.
T Consensus 149 ~~~---~~~~~~dl~~~v~~~~~~l~l~~~y~~~lf~~~~i~~l~~~f~~lL~~~~ 201 (1389)
T TIGR03443 149 TTY---STGSTTDLTVFLTPSSPELELSIYYNSLLFSSDRITIVADQLAQLLSAAS 201 (1389)
T ss_pred ccc---ccCCccceEEEEEecCCcEEEEEEEchhcCCHHHHHHHHHHHHHHHHHHH
Confidence 111 11234467888877789999999999999962 4445555555555543
No 22
>PF00198 2-oxoacid_dh: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); InterPro: IPR001078 This domain is found in the lipoamide acyltransferase component of the branched-chain alpha-keto acid dehydrogenase complex 2.3.1 from EC, which catalyses the overall conversion of alpha-keto acids to acyl-CoA and carbon dioxide []. It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). The domain is also found in the dihydrolipoamide succinyltransferase component of the 2-oxoglutarate dehydrogenase complex 2.3.1.61 from EC. These proteins contain one to three copies of a lipoyl binding domain followed by the catalytic domain.; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1EAF_A 1EAA_A 1DPD_A 1EAE_A 1DPC_A 1EAB_A 1DPB_A 1EAC_A 1EAD_A 2II5_H ....
Probab=93.28 E-value=5.2 Score=36.91 Aligned_cols=61 Identities=15% Similarity=0.124 Sum_probs=34.6
Q ss_pred EEEEeechHHHHHHHHH----cc----CCchhHHHHHHHHHHHHHHHhhhC---CCC-CCCCcceEEEEEeee
Q 012980 213 LATATFSIDDMKAVKKA----IA----GATINDVLFGVVSSGLSRYLDHRS---PNA-LPEGLRITGLAMVNI 273 (452)
Q Consensus 213 ~~~~~~~~~~lk~~a~~----~~----g~TvndvllAa~a~al~~~~~~~~---~~~-~~~~~~l~~~vPv~l 273 (452)
....+++.+.+.+..++ .. +.|++++++-|++.||.++-.-.+ +.. +-....+.+++.|+.
T Consensus 31 ~~~~evd~t~l~~~r~~l~~~~~~~~~kis~~~~likAva~AL~~~P~lNa~~~~~~~i~~~~~vnIgvAV~~ 103 (231)
T PF00198_consen 31 TLSREVDVTALLALRKELKEAGEEPGGKISITDFLIKAVALALKEHPELNASWDGDGEIVLYERVNIGVAVDT 103 (231)
T ss_dssp EEEEEEETHHHHHHHHHHHHHHHHTTST-THHHHHHHHHHHHHHHSGGGSEEEETTSEEEEESS--EEEEEEE
T ss_pred EEEEEEEHHHHHHHHHHhhhHHHhhccCCChhHeeeehHhhhhHHHHHhccccccccceeeeeeEEEEEEEEc
Confidence 34666776655554332 11 789999999999999988754322 001 101134667777765
No 23
>PRK05704 dihydrolipoamide succinyltransferase; Validated
Probab=92.42 E-value=7 Score=39.38 Aligned_cols=40 Identities=13% Similarity=0.184 Sum_probs=28.6
Q ss_pred EEEeechHHHHHHHHHcc---------CCchhHHHHHHHHHHHHHHHhh
Q 012980 214 ATATFSIDDMKAVKKAIA---------GATINDVLFGVVSSGLSRYLDH 253 (452)
Q Consensus 214 ~~~~~~~~~lk~~a~~~~---------g~TvndvllAa~a~al~~~~~~ 253 (452)
...++++..+.++.+++. +.|+|++|+-|++.||.+|-.-
T Consensus 206 ~~~evd~~~l~~~r~~~~~~~~~~~~~kls~~~~likA~a~AL~~~P~~ 254 (407)
T PRK05704 206 TFNEVDMTPVMDLRKQYKDAFEKKHGVKLGFMSFFVKAVVEALKRYPEV 254 (407)
T ss_pred EEEEEeHHHHHHHHHHHHhhhHhhcCCCcCHHHHHHHHHHHHHHhCcHh
Confidence 356677766655433320 5899999999999999987544
No 24
>PF07428 Tri3: 15-O-acetyltransferase Tri3; InterPro: IPR009992 This family represents a conserved region approximately 400 residues long within 15-O-acetyltransferase (Tri3), which seems to be restricted to ascomycete fungi. In Fusarium sporotrichioides, this is required for acetylation of the C-15 hydroxyl group of trichothecenes in the biosynthesis of T-2 toxin [].; PDB: 3FP0_A 3FOT_A.
Probab=92.20 E-value=6.1 Score=38.13 Aligned_cols=115 Identities=21% Similarity=0.160 Sum_probs=55.8
Q ss_pred EEEEEeechHHHHHHHHH----c-cCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCcchhhhhh
Q 012980 212 KLATATFSIDDMKAVKKA----I-AGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLM 286 (452)
Q Consensus 212 ~~~~~~~~~~~lk~~a~~----~-~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~~~~~~~~~~~ 286 (452)
++..-+++.++-.++.++ . |+.|+|.+-.||+..||=+...... .++...+..-+||+.|+..-. ++.
T Consensus 269 r~~i~~fs~~eS~Ai~k~vKt~~gP~~TisHL~qAAvllALL~~~~P~d---~~D~~~~isp~~v~GRR~Lr~----~~a 341 (413)
T PF07428_consen 269 RCIIHSFSAEESIAIKKAVKTRLGPKYTISHLGQAAVLLALLRDLKPTD---LPDSQAFISPMPVNGRRWLRP----KIA 341 (413)
T ss_dssp EEEEEE--HHHHHHHHHHHHHHT-TT--HHHHHHHHHHHHHHHH----------TT--EEEEEEEE-GGGB-H----HHH
T ss_pred ceecccCChhhhHHHHHHHhcccCCCcCHHHHHHHHHHHHHHhccCCCC---CCCcceEecccccCcchhccc----chh
Confidence 446666776654443332 2 3889999999999999988765432 466555888999999998642 222
Q ss_pred ccCCCCCCCceEEEEEEEccC----CCCCCCHHHH-HHHHHHHHHHhhhccchhhh
Q 012980 287 KSNSGTRWGNKFGMLLLPIYY----HKGGADPLSY-VKRAKKMIDSKKLTLEGHFS 337 (452)
Q Consensus 287 ~~~~~~~~gN~~~~~~~~l~~----p~~~~d~~~~-l~~v~~~~~~~k~~~~~~~~ 337 (452)
....+-.-+...+.+-. .+...|-.+. .+...+.++..|.+-+.+..
T Consensus 342 ----~~~Y~~cqt~a~V~~eniks~~v~~~d~k~~~~~~l~~a~~~~k~~yd~~l~ 393 (413)
T PF07428_consen 342 ----KNYYAICQTAAVVRFENIKSIAVSDADDKDIQVKALEQACRDVKKSYDQWLS 393 (413)
T ss_dssp ----TS--S--EEEEEEEE--GGGG---TTS-HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ----hhhhhhhhccceEEEccchheeccccccccccHHHHHHHHHHHHHHHHHHhc
Confidence 12233333444444310 1222232222 46677777778877665443
No 25
>TIGR01347 sucB 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component). dihydrolipoamide acetyltransferase. The seed for this model includes mitochondrial and Gram-negative bacterial forms. Mycobacterial candidates are highly derived, differ in having and extra copy of the lipoyl-binding domain at the N-terminus. They score below the trusted cutoff, but above the noise cutoff and above all examples of dihydrolipoamide acetyltransferase.
Probab=91.49 E-value=8.5 Score=38.74 Aligned_cols=39 Identities=10% Similarity=0.216 Sum_probs=27.7
Q ss_pred EEEeechHHHHHHHHH----------ccCCchhHHHHHHHHHHHHHHHhh
Q 012980 214 ATATFSIDDMKAVKKA----------IAGATINDVLFGVVSSGLSRYLDH 253 (452)
Q Consensus 214 ~~~~~~~~~lk~~a~~----------~~g~TvndvllAa~a~al~~~~~~ 253 (452)
...++++..+.+..+. . +.|+|++|+-|++.||.+|-.-
T Consensus 202 ~~~evd~t~l~~~r~~~~~~~~~~~~~-kls~~~~likA~a~AL~~~P~~ 250 (403)
T TIGR01347 202 TFNEVDMSAVMELRKRYKEEFEKKHGV-KLGFMSFFVKAVVAALKRFPEV 250 (403)
T ss_pred EEEEEEHHHHHHHHHHHHhhhHhhcCC-CcCHHHHHHHHHHHHHHhCcHh
Confidence 3556666555544332 3 5899999999999999987544
No 26
>TIGR01349 PDHac_trf_mito pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form. This model represents one of several closely related clades of the dihydrolipoamide acetyltransferase subunit of the pyruvate dehydrogenase complex. It includes sequences from mitochondria and from alpha and beta branches of the proteobacteria, as well as from some other bacteria. Sequences from Gram-positive bacteria are not included. The non-enzymatic homolog protein X, which serves as an E3 component binding protein, falls within the clade phylogenetically but is rejected by its low score.
Probab=91.28 E-value=6.3 Score=40.13 Aligned_cols=41 Identities=15% Similarity=0.292 Sum_probs=29.1
Q ss_pred EEEeechHHHHHHHHHc-------cCCchhHHHHHHHHHHHHHHHhhh
Q 012980 214 ATATFSIDDMKAVKKAI-------AGATINDVLFGVVSSGLSRYLDHR 254 (452)
Q Consensus 214 ~~~~~~~~~lk~~a~~~-------~g~TvndvllAa~a~al~~~~~~~ 254 (452)
...++++..+.++.+.+ .+.|++++|+=|++.||.+|-.-.
T Consensus 235 ~~~evd~t~l~~~r~~~~~~~~~~~klt~~~~l~kA~a~AL~~~P~~N 282 (435)
T TIGR01349 235 VSIECNVDKLLALRKELNAMASEVYKLSVNDFIIKASALALREVPEAN 282 (435)
T ss_pred EEEEEEhHHHHHHHHHHHhhhhcCCcccHHHHHHHHHHHHHHhCcHhh
Confidence 45566666655544432 169999999999999999875443
No 27
>PRK11857 dihydrolipoamide acetyltransferase; Reviewed
Probab=90.64 E-value=12 Score=36.13 Aligned_cols=23 Identities=9% Similarity=-0.003 Sum_probs=19.8
Q ss_pred CCchhHHHHHHHHHHHHHHHhhh
Q 012980 232 GATINDVLFGVVSSGLSRYLDHR 254 (452)
Q Consensus 232 g~TvndvllAa~a~al~~~~~~~ 254 (452)
+.|++++++-|++.||.+|-.-.
T Consensus 131 kls~~~~likA~a~AL~~~P~~N 153 (306)
T PRK11857 131 KLTFLPFIAKAILIALKEFPIFA 153 (306)
T ss_pred CCCHHHHHHHHHHHHHHhCcHhh
Confidence 58999999999999999886543
No 28
>PLN02744 dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex
Probab=90.49 E-value=16 Score=38.19 Aligned_cols=41 Identities=15% Similarity=0.289 Sum_probs=29.0
Q ss_pred EEEeechHHHHHHHHHcc---------CCchhHHHHHHHHHHHHHHHhhh
Q 012980 214 ATATFSIDDMKAVKKAIA---------GATINDVLFGVVSSGLSRYLDHR 254 (452)
Q Consensus 214 ~~~~~~~~~lk~~a~~~~---------g~TvndvllAa~a~al~~~~~~~ 254 (452)
...+++++.+.++.+.+. +.|+|++|+=|++.||.+|-.-.
T Consensus 337 ~~~evdvt~L~~lR~~l~~~~~~~~g~kls~~~~liKA~a~AL~~~P~lN 386 (539)
T PLN02744 337 LTVDTRVDKLMALRSQLNSLQEASGGKKISVNDLVIKAAALALRKVPQCN 386 (539)
T ss_pred EEEEEEcHHHHHHHHHHHHHhhhcccCccCHHHHHHHHHHHHHHhCcHhh
Confidence 356667666555443220 58999999999999999876543
No 29
>PTZ00144 dihydrolipoamide succinyltransferase; Provisional
Probab=90.22 E-value=17 Score=36.67 Aligned_cols=40 Identities=5% Similarity=0.066 Sum_probs=28.5
Q ss_pred EEEeechHHHHHHHHH----------ccCCchhHHHHHHHHHHHHHHHhhh
Q 012980 214 ATATFSIDDMKAVKKA----------IAGATINDVLFGVVSSGLSRYLDHR 254 (452)
Q Consensus 214 ~~~~~~~~~lk~~a~~----------~~g~TvndvllAa~a~al~~~~~~~ 254 (452)
...++++.++.++.++ . +.|+|++++=|++.||.+|-.-.
T Consensus 217 ~~~eid~t~l~~~r~~~~~~~~~~~g~-klS~~~~liKAva~AL~~~P~~N 266 (418)
T PTZ00144 217 TFNECDMSALMELRKEYKDDFQKKHGV-KLGFMSAFVKASTIALKKMPIVN 266 (418)
T ss_pred EEEEEechHHHHHHHHHHhhhhhhcCC-cccHHHHHHHHHHHHHHhChHhh
Confidence 4666766555443332 2 57999999999999999986554
No 30
>PLN02528 2-oxoisovalerate dehydrogenase E2 component
Probab=90.15 E-value=17 Score=36.81 Aligned_cols=40 Identities=20% Similarity=0.228 Sum_probs=28.0
Q ss_pred EEEeechHHHHHHHHHcc--------CCchhHHHHHHHHHHHHHHHhh
Q 012980 214 ATATFSIDDMKAVKKAIA--------GATINDVLFGVVSSGLSRYLDH 253 (452)
Q Consensus 214 ~~~~~~~~~lk~~a~~~~--------g~TvndvllAa~a~al~~~~~~ 253 (452)
...++++..+.++.+.+. +.|+|++|+-|++.||.+|-.-
T Consensus 212 ~~~eid~~~l~~~r~~~~~~~~~~g~kls~~~~likA~a~aL~~~P~~ 259 (416)
T PLN02528 212 YVEEINVDALVELKASFQENNTDPTVKHTFLPFLIKSLSMALSKYPLL 259 (416)
T ss_pred EEEEEEhHHHHHHHHHHhhhhhhcCCcccHHHHHHHHHHHHHHhCchh
Confidence 456666665554333220 5899999999999999987544
No 31
>PRK11856 branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed
Probab=89.89 E-value=13 Score=37.52 Aligned_cols=40 Identities=20% Similarity=0.361 Sum_probs=32.4
Q ss_pred EEEeechHHHHHHHHHcc----CCchhHHHHHHHHHHHHHHHhh
Q 012980 214 ATATFSIDDMKAVKKAIA----GATINDVLFGVVSSGLSRYLDH 253 (452)
Q Consensus 214 ~~~~~~~~~lk~~a~~~~----g~TvndvllAa~a~al~~~~~~ 253 (452)
....+++..+.+.++... +.|++++++-|++.||.++-.-
T Consensus 216 ~~~~idvt~l~~~~k~~~~~~~~ls~~~~~ikav~~Al~~~P~~ 259 (411)
T PRK11856 216 LTDEVDVTALLALRKQLKAIGVKLTVTDFLIKAVALALKKFPEL 259 (411)
T ss_pred EEEEEEhHHHHHHHHHHHhhccCccHHHHHHHHHHHHHHhCcHh
Confidence 477788888888777762 6899999999999999887543
No 32
>PRK14843 dihydrolipoamide acetyltransferase; Provisional
Probab=89.58 E-value=15 Score=36.14 Aligned_cols=21 Identities=24% Similarity=0.135 Sum_probs=18.6
Q ss_pred CCchhHHHHHHHHHHHHHHHh
Q 012980 232 GATINDVLFGVVSSGLSRYLD 252 (452)
Q Consensus 232 g~TvndvllAa~a~al~~~~~ 252 (452)
+.|+|++++=|++.||.+|-.
T Consensus 173 kls~~~~likA~a~AL~~~P~ 193 (347)
T PRK14843 173 KTTVTDLLSLAVVKTLMKHPY 193 (347)
T ss_pred cccHHHHHHHHHHHHHHhCcc
Confidence 599999999999999998753
No 33
>PLN02226 2-oxoglutarate dehydrogenase E2 component
Probab=87.82 E-value=21 Score=36.40 Aligned_cols=40 Identities=5% Similarity=0.017 Sum_probs=28.5
Q ss_pred EEEeechHHHHHHHHHcc---------CCchhHHHHHHHHHHHHHHHhh
Q 012980 214 ATATFSIDDMKAVKKAIA---------GATINDVLFGVVSSGLSRYLDH 253 (452)
Q Consensus 214 ~~~~~~~~~lk~~a~~~~---------g~TvndvllAa~a~al~~~~~~ 253 (452)
...++++..+.++.+.+. +.|++++++-|++.||.+|-.-
T Consensus 262 ~~~evDvt~L~~lR~~l~~~~~~~~g~klS~~~~liKAva~AL~~~P~l 310 (463)
T PLN02226 262 TFNEVDMTNLMKLRSQYKDAFYEKHGVKLGLMSGFIKAAVSALQHQPVV 310 (463)
T ss_pred EEEEEEcHHHHHHHHHHHhhhhhhcCCcccHHHHHHHHHHHHHHhCCHh
Confidence 466777666555443320 5899999999999999987544
No 34
>TIGR02927 SucB_Actino 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase. This model represents an Actinobacterial clade of E2 enzyme, a component of the 2-oxoglutarate dehydrogenase complex involved in the TCA cycle. These proteins have multiple domains including the catalytic domain (pfam00198), one or two biotin domains (pfam00364) and an E3-component binding domain (pfam02817).
Probab=87.74 E-value=16 Score=38.88 Aligned_cols=40 Identities=10% Similarity=0.066 Sum_probs=27.6
Q ss_pred EEEeechHHHHHHHHHcc---------CCchhHHHHHHHHHHHHHHHhh
Q 012980 214 ATATFSIDDMKAVKKAIA---------GATINDVLFGVVSSGLSRYLDH 253 (452)
Q Consensus 214 ~~~~~~~~~lk~~a~~~~---------g~TvndvllAa~a~al~~~~~~ 253 (452)
...++++..+.++.+.+. +.|+|++++-|++.||.+|-.-
T Consensus 381 ~~~evdvt~l~~~R~~l~~~~~~~~~~kls~~~~iiKA~a~AL~~~P~~ 429 (590)
T TIGR02927 381 QLHEVDMTKIAALRARAKAAFAEKEGVNLTFLPFFAKAVIDALKAHPNV 429 (590)
T ss_pred EEeEEEcHHHHHHHHHHHhhhHHhcCCcccHHHHHHHHHHHHHHhCCHh
Confidence 355666655554333220 5899999999999999987543
No 35
>TIGR01348 PDHac_trf_long pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form. This model describes a subset of pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase specifically close by both phylogenetic and per cent identity (UPGMA) trees. Members of this set include two or three copies of the lipoyl-binding domain. E. coli AceF is a member of this model, while mitochondrial and some other bacterial forms belong to a separate model.
Probab=85.39 E-value=44 Score=35.21 Aligned_cols=40 Identities=20% Similarity=0.316 Sum_probs=27.1
Q ss_pred EEEeechHHHHHHHHHcc--------CCchhHHHHHHHHHHHHHHHhh
Q 012980 214 ATATFSIDDMKAVKKAIA--------GATINDVLFGVVSSGLSRYLDH 253 (452)
Q Consensus 214 ~~~~~~~~~lk~~a~~~~--------g~TvndvllAa~a~al~~~~~~ 253 (452)
...++++..+.++.+++. +.|+|++|+-|++.||.+|-.-
T Consensus 346 ~~~evdvt~l~~~r~~l~~~~~~~g~kls~~~~l~kA~~~AL~~~P~~ 393 (546)
T TIGR01348 346 HFDKADITEMEAFRKQQNAAVEKEGVKLTVLHILMKAVAAALKKFPKF 393 (546)
T ss_pred EEEEEEcHHHHHHHHHHHhhhhhcCCcccHHHHHHHHHHHHHHhCChh
Confidence 355666555444332220 5899999999999999987544
No 36
>PF13745 HxxPF_rpt: HxxPF-repeated domain; PDB: 2JGP_A.
Probab=82.70 E-value=7.8 Score=29.40 Aligned_cols=63 Identities=11% Similarity=0.149 Sum_probs=36.4
Q ss_pred cccccceeEEEeccCCCCcceeecCCeeeEEeeccCCCCceeEEEEEeeCCeEEEEEEecCCCCC
Q 012980 358 YRIVCNTTFTISNIVGPTEKITLADNPVAYLRANTSSLPHALTMHMMSYAGRADMQILVAKDIIP 422 (452)
Q Consensus 358 ~~~~~~~~~~vSNv~g~~~~l~~~g~~v~~~~~~~~~~~~~l~v~v~s~~g~l~l~i~~d~~~~~ 422 (452)
+..++++.+.+-|... ..+.++|..++.+..........|++.+...+|.+.+.+.++.+++.
T Consensus 22 ~~plfqv~f~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~DL~l~~~~~~~~l~~~~~Y~~~lf~ 84 (91)
T PF13745_consen 22 RNPLFQVMFNYQNFSQ--SALDLGGLRLEPIPLENGGAKFDLTLEVREDGDGLRLQLEYNTDLFS 84 (91)
T ss_dssp S-SS-SEEEEEE------S----SSEEEEE-SS--SB-SSSEEEEEEE-SS-EEEEEEEETTT--
T ss_pred cccccCeEEEEEeccc--ccccCCCceEEEeeccccceeeeEEEEEEecCCeEEEEEEEEhHhCC
Confidence 4556777788887654 34677888777653323455678999999999999999999999884
No 37
>PF00302 CAT: Chloramphenicol acetyltransferase; InterPro: IPR001707 Chloramphenicol acetyltransferase (CAT) (2.3.1.28 from EC) [] catalyzes the acetyl-CoA dependent acetylation of chloramphenicol (Cm), an antibiotic which inhibits prokaryotic peptidyltransferase activity. Acetylation of Cm by CAT inactivates the antibiotic. A histidine residue, located in the C-terminal section of the enzyme, plays a central role in its catalytic mechanism. There is a second family of CAT [], evolutionary unrelated to the main family described above. These CAT belong to the bacterial hexapeptide-repeat containing-transferases family (see IPR001451 from INTERPRO). The crystal structure of the type III enzyme from Escherichia coli with chloramphenicol bound has been determined. CAT is a trimer of identical subunits (monomer Mr 25,000) and the trimeric structure is stabilised by a number of hydrogen bonds, some of which result in the extension of a beta-sheet across the subunit interface. Chloramphenicol binds in a deep pocket located at the boundary between adjacent subunits of the trimer, such that the majority of residues forming the binding pocket belong to one subunit while the catalytically essential histidine belongs to the adjacent subunit. His195 is appropriately positioned to act as a general base catalyst in the reaction, and the required tautomeric stabilisation is provided by an unusual interaction with a main-chain carbonyl oxygen [].; GO: 0008811 chloramphenicol O-acetyltransferase activity; PDB: 1CIA_A 4CLA_A 1QCA_A 2CLA_A 1CLA_A 3CLA_A 3U9F_K 1PD5_F 1Q23_F 3U9B_F ....
Probab=79.36 E-value=1.3 Score=40.16 Aligned_cols=23 Identities=26% Similarity=0.323 Sum_probs=18.7
Q ss_pred EEEEeecccccccccHHHHHHHh
Q 012980 119 CAVFRIHHALGDGISLVSMLLAG 141 (452)
Q Consensus 119 ~l~~~~HH~l~DG~s~~~l~~~l 141 (452)
-|.+.+||+++||.-..+++.+|
T Consensus 183 PvsiqvhHa~~DG~Hv~~F~~~l 205 (206)
T PF00302_consen 183 PVSIQVHHALVDGYHVGQFFEEL 205 (206)
T ss_dssp EEEEEEETTT--HHHHHHHHHHH
T ss_pred EEEEEEecccccHHHHHHHHHHh
Confidence 48999999999999999998765
No 38
>PRK11854 aceF pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated
Probab=75.44 E-value=80 Score=33.96 Aligned_cols=39 Identities=15% Similarity=0.197 Sum_probs=28.0
Q ss_pred EEEeechHHHHHHHH-----------HccCCchhHHHHHHHHHHHHHHHhh
Q 012980 214 ATATFSIDDMKAVKK-----------AIAGATINDVLFGVVSSGLSRYLDH 253 (452)
Q Consensus 214 ~~~~~~~~~lk~~a~-----------~~~g~TvndvllAa~a~al~~~~~~ 253 (452)
....+++..+.++.+ .. +.|+|++++=|++.||.+|-.-
T Consensus 431 ~~~evD~t~l~~~rk~~~~~~~~~~~g~-k~t~~~~likAva~Al~~~P~~ 480 (633)
T PRK11854 431 QFDKADITELEAFRKQQNAEAEKRKLGV-KITPLVFIMKAVAAALEQMPRF 480 (633)
T ss_pred EEeEEEcHHHHHHHHHHhhhhhhhcccC-cccHHHHHHHHHHHHHHhCCHh
Confidence 355666666655444 13 5899999999999999987544
No 39
>PRK11855 dihydrolipoamide acetyltransferase; Reviewed
Probab=74.47 E-value=1.2e+02 Score=31.98 Aligned_cols=39 Identities=18% Similarity=0.262 Sum_probs=26.9
Q ss_pred EEEeechHHHHHHHHH---------ccCCchhHHHHHHHHHHHHHHHhh
Q 012980 214 ATATFSIDDMKAVKKA---------IAGATINDVLFGVVSSGLSRYLDH 253 (452)
Q Consensus 214 ~~~~~~~~~lk~~a~~---------~~g~TvndvllAa~a~al~~~~~~ 253 (452)
....+++..+.++++. . +.|++++++-|++.||.+|-.-
T Consensus 347 ~~~evd~t~l~~~r~~~~~~~~~~g~-k~s~~~~likAv~~al~~~P~l 394 (547)
T PRK11855 347 QFDEADITDLEALRKQLKKEAEKAGV-KLTMLPFFIKAVVAALKEFPVF 394 (547)
T ss_pred EEEEEEChHHHHHHHHhhhhhhhcCC-CCCHHHHHHHHHHHHHHhCcHh
Confidence 3556666655543321 2 4789999999999999887543
No 40
>PRK13757 chloramphenicol acetyltransferase; Provisional
Probab=73.42 E-value=2.3 Score=38.80 Aligned_cols=24 Identities=29% Similarity=0.342 Sum_probs=20.9
Q ss_pred EEEEeecccccccccHHHHHHHhc
Q 012980 119 CAVFRIHHALGDGISLVSMLLAGC 142 (452)
Q Consensus 119 ~l~~~~HH~l~DG~s~~~l~~~l~ 142 (452)
-|.+.+||+++||.-..+++..|-
T Consensus 186 PvSvqvHHa~~DG~Hv~~F~~~lQ 209 (219)
T PRK13757 186 PLAIQVHHAVCDGFHVGRMLNELQ 209 (219)
T ss_pred EEEEEEehhccchHHHHHHHHHHH
Confidence 488999999999999999887653
No 41
>COG4845 Chloramphenicol O-acetyltransferase [Defense mechanisms]
Probab=70.67 E-value=3.4 Score=36.67 Aligned_cols=25 Identities=20% Similarity=0.137 Sum_probs=21.5
Q ss_pred EEEEeecccccccccHHHHHHHhcc
Q 012980 119 CAVFRIHHALGDGISLVSMLLAGCR 143 (452)
Q Consensus 119 ~l~~~~HH~l~DG~s~~~l~~~l~~ 143 (452)
-+.+++||+.+||+-+.+++..|-.
T Consensus 185 Plavq~hHA~vDG~Hi~~l~~~lQ~ 209 (219)
T COG4845 185 PLAVQAHHANVDGFHIGQLFDQLQT 209 (219)
T ss_pred eEEEEecccccchhhHHHHHHHHHH
Confidence 3889999999999999999876643
No 42
>PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed
Probab=64.31 E-value=1.7e+02 Score=32.98 Aligned_cols=45 Identities=4% Similarity=0.079 Sum_probs=30.9
Q ss_pred CCchhHHHHHHHHHHHHHHHhhhC------CCC-CCCCcceEEEEEeeeccC
Q 012980 232 GATINDVLFGVVSSGLSRYLDHRS------PNA-LPEGLRITGLAMVNIRRQ 276 (452)
Q Consensus 232 g~TvndvllAa~a~al~~~~~~~~------~~~-~~~~~~l~~~vPv~lR~~ 276 (452)
++|+++++.-|++.||.++-.-.. +++ +.....+.+++.|++-..
T Consensus 169 KVSFThlI~kAvv~AL~~~P~mNasy~~~DGKp~iv~~~~VNlGiAVdl~~~ 220 (1228)
T PRK12270 169 KVSFTHLIGYALVQALKAFPNMNRHYAEVDGKPTLVTPAHVNLGLAIDLPKK 220 (1228)
T ss_pred cccHHHHHHHHHHHHHHhCchhhceeeccCCCceeeccCCcceEEEEecCCC
Confidence 889999999999999988754322 111 112246788888888543
No 43
>KOG0557 consensus Dihydrolipoamide acetyltransferase [Energy production and conversion]
Probab=56.95 E-value=1.3e+02 Score=30.60 Aligned_cols=37 Identities=16% Similarity=0.390 Sum_probs=26.0
Q ss_pred EEEEeechHHHHHHHHHcc------CCchhHHHHHHHHHHHHH
Q 012980 213 LATATFSIDDMKAVKKAIA------GATINDVLFGVVSSGLSR 249 (452)
Q Consensus 213 ~~~~~~~~~~lk~~a~~~~------g~TvndvllAa~a~al~~ 249 (452)
+...+..++.+-++.+... ++|+||++.=+.+.++++
T Consensus 269 yvt~~~~~d~ll~~r~~ln~~~~~~~vsvndliiKAaa~al~~ 311 (470)
T KOG0557|consen 269 YVTVDVNLDKLLALREKLNFEKSIKKVSLNDLIAKAAALALAK 311 (470)
T ss_pred EEeeeeehHHHHHHHHHhhhcccCcccchhHHHHHHHHHHHhc
Confidence 3455666666555544331 799999999998888875
No 44
>PF03869 Arc: Arc-like DNA binding domain; InterPro: IPR005569 Arc repressor act by the cooperative binding of two Arc repressor dimers to a 21-base-pair operator site. Each Arc dimer uses an antiparallel beta-sheet to recognise bases in the major groove [].; GO: 0003677 DNA binding; PDB: 3QOQ_D 1MNT_B 1QTG_B 1BDV_A 1PAR_C 1BDT_C 1ARR_B 1MYL_F 1MYK_A 1NLA_B ....
Probab=54.06 E-value=32 Score=23.25 Aligned_cols=34 Identities=12% Similarity=0.144 Sum_probs=25.9
Q ss_pred EEEeechHHHHHHHHHccCCchhHHHHHHHHHHHH
Q 012980 214 ATATFSIDDMKAVKKAIAGATINDVLFGVVSSGLS 248 (452)
Q Consensus 214 ~~~~~~~~~lk~~a~~~~g~TvndvllAa~a~al~ 248 (452)
....--.+.|+..|+.. |-|+|.-+..++-.+|.
T Consensus 10 RlP~~l~~~lk~~A~~~-gRS~NsEIv~~L~~~l~ 43 (50)
T PF03869_consen 10 RLPEELKEKLKERAEEN-GRSMNSEIVQRLEEALK 43 (50)
T ss_dssp ECEHHHHHHHHHHHHHT-TS-HHHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHHHh-CCChHHHHHHHHHHHHh
Confidence 34444468899999999 99999998888766655
No 45
>PF01402 RHH_1: Ribbon-helix-helix protein, copG family; InterPro: IPR002145 CopG, also known as RepA, is responsible for the regulation of plasmid copy number. It binds to the repAB promoter and controls synthesis of the plasmid replication initiator protein RepB. Many bacterial transcription regulation proteins bind DNA through a 'helix-turn-helix' motif, nevertheless CopG displays a fully defined HTH-motif structure that is involved not in DNA-binding, but in the maintenance of the intrinsic dimeric functional structure and cooperativity [, ].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2BJ3_B 2BJ8_A 2BJ1_A 2BJ9_A 2BJ7_B 1EA4_L 2CPG_C 1B01_B 2BA3_A 2K9I_B ....
Probab=51.02 E-value=47 Score=20.64 Aligned_cols=32 Identities=9% Similarity=0.188 Sum_probs=24.3
Q ss_pred EEeechHHHHHHHHHccCCchhHHHHHHHHHHH
Q 012980 215 TATFSIDDMKAVKKAIAGATINDVLFGVVSSGL 247 (452)
Q Consensus 215 ~~~~~~~~lk~~a~~~~g~TvndvllAa~a~al 247 (452)
..+--.+.+.++|+.. |.|.++++--++...+
T Consensus 6 l~~~~~~~l~~~a~~~-g~s~s~~ir~ai~~~l 37 (39)
T PF01402_consen 6 LPDELYERLDELAKEL-GRSRSELIREAIREYL 37 (39)
T ss_dssp EEHHHHHHHHHHHHHH-TSSHHHHHHHHHHHHH
T ss_pred eCHHHHHHHHHHHHHH-CcCHHHHHHHHHHHHH
Confidence 3344467899999999 9999998877765544
No 46
>PF05534 HicB: HicB family; InterPro: IPR008651 This family consists of several bacterial HicB related proteins. The function of HicB is unknown although it is thought to be involved in pilus formation. It has been speculated that HicB performs a function antagonistic to that of pili and yet is necessary for invasion of certain niches [].
Probab=44.95 E-value=25 Score=23.87 Aligned_cols=25 Identities=12% Similarity=0.056 Sum_probs=20.1
Q ss_pred eechHHHHHHHHHccCCchhHHHHHH
Q 012980 217 TFSIDDMKAVKKAIAGATINDVLFGV 242 (452)
Q Consensus 217 ~~~~~~lk~~a~~~~g~TvndvllAa 242 (452)
.--.++++..|++. |+|+|+.+.-+
T Consensus 26 ~~Lh~~l~~~A~~~-gvSlN~~I~~a 50 (51)
T PF05534_consen 26 PELHRALAEAAAAE-GVSLNQWIEEA 50 (51)
T ss_pred HHHHHHHHHHHHHh-CCCHHHHHHHH
Confidence 33357888899999 99999988755
No 47
>PHA01513 mnt Mnt
Probab=32.31 E-value=69 Score=24.17 Aligned_cols=36 Identities=28% Similarity=0.311 Sum_probs=28.5
Q ss_pred EEEEeechHHHHHHHHHccCCchhHHHHHHHHHHHHH
Q 012980 213 LATATFSIDDMKAVKKAIAGATINDVLFGVVSSGLSR 249 (452)
Q Consensus 213 ~~~~~~~~~~lk~~a~~~~g~TvndvllAa~a~al~~ 249 (452)
+....-..++|+.+|+.. |.|+|.-+..++..+|..
T Consensus 10 LRLP~eLk~rL~~aA~~n-GRSmNaeIv~~Le~al~~ 45 (82)
T PHA01513 10 LRLPYELKEKLKQRAKAN-GRSLNAELVQIVQDALSK 45 (82)
T ss_pred eeCCHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHhcC
Confidence 334444567899999999 999999999998887653
No 48
>PF12651 RHH_3: Ribbon-helix-helix domain
Probab=30.75 E-value=1.1e+02 Score=19.89 Aligned_cols=35 Identities=14% Similarity=0.228 Sum_probs=27.7
Q ss_pred EEeechHHHHHHHHHccCCchhHHHHHHHHHHHHHH
Q 012980 215 TATFSIDDMKAVKKAIAGATINDVLFGVVSSGLSRY 250 (452)
Q Consensus 215 ~~~~~~~~lk~~a~~~~g~TvndvllAa~a~al~~~ 250 (452)
...--.++++.+++.. |+..+.++=-|+-..|..|
T Consensus 9 l~~el~~~L~~ls~~t-~i~~S~Ll~eAle~~l~ky 43 (44)
T PF12651_consen 9 LDKELYEKLKELSEET-GIPKSKLLREALEDYLEKY 43 (44)
T ss_pred cCHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHhc
Confidence 3334467899999999 9999999888877766655
No 49
>PF13443 HTH_26: Cro/C1-type HTH DNA-binding domain; PDB: 3TYR_A 3TYS_A 3B7H_A.
Probab=30.72 E-value=27 Score=24.43 Aligned_cols=22 Identities=18% Similarity=0.430 Sum_probs=15.5
Q ss_pred eechHHHHHHHHHccCCchhHHH
Q 012980 217 TFSIDDMKAVKKAIAGATINDVL 239 (452)
Q Consensus 217 ~~~~~~lk~~a~~~~g~Tvndvl 239 (452)
..+++.+.++|+.+ |+++++++
T Consensus 37 ~~~~~~l~~ia~~l-~~~~~el~ 58 (63)
T PF13443_consen 37 NPSLDTLEKIAKAL-NCSPEELF 58 (63)
T ss_dssp ---HHHHHHHHHHH-T--HHHCT
T ss_pred cccHHHHHHHHHHc-CCCHHHHh
Confidence 47789999999999 99999864
No 50
>smart00803 TAF TATA box binding protein associated factor. TAFs (TATA box binding protein associated factors) are part of the transcription initiation factor TFIID multimeric protein complex. TFIID is composed of the TATA box binding protein (TBP) and a number of TAFs. The TAFs provide binding sites for many different transcriptional activators and co-activators that modulate transcription initiation by Pol II. TAF proteins adopt a histone-like fold.
Probab=28.11 E-value=1.4e+02 Score=21.41 Aligned_cols=35 Identities=11% Similarity=0.289 Sum_probs=28.8
Q ss_pred echHHHHHHHHHccCCc-hhHHHHHHHHHHHHHHHhh
Q 012980 218 FSIDDMKAVKKAIAGAT-INDVLFGVVSSGLSRYLDH 253 (452)
Q Consensus 218 ~~~~~lk~~a~~~~g~T-vndvllAa~a~al~~~~~~ 253 (452)
+|.+.++.+++.. |++ ++|-....++..+..++.+
T Consensus 3 ~p~~~i~ria~~~-Gi~ris~~a~~~l~~~~e~rl~~ 38 (65)
T smart00803 3 LPKETIKDVAESL-GIGNLSDEAAKLLAEDVEYRIKE 38 (65)
T ss_pred CCHHHHHHHHHHC-CCccccHHHHHHHHHHHHHHHHH
Confidence 5778999999999 998 9998888888877766644
No 51
>PRK03762 hypothetical protein; Provisional
Probab=27.70 E-value=2.2e+02 Score=22.61 Aligned_cols=38 Identities=11% Similarity=0.143 Sum_probs=29.4
Q ss_pred CCeEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHhh
Q 012980 407 AGRADMQILVAKDIIPDPELLAKCFEDSLLEMKEAALT 444 (452)
Q Consensus 407 ~g~l~l~i~~d~~~~~~~~~l~~~~~~~l~el~~~~~~ 444 (452)
+..--.+|.-|+.++.|.+.|.|.+..++.+-.+.+.+
T Consensus 48 G~~~i~~i~Id~~ll~D~e~LeDLI~aAiNdA~~k~~~ 85 (103)
T PRK03762 48 GKGEVIDISIDDSLLEDKESLQILLISAINDVYKMVEE 85 (103)
T ss_pred cCceEEEEEECHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 44444788889888889999999999998777666653
No 52
>PRK14628 hypothetical protein; Provisional
Probab=24.25 E-value=2.6e+02 Score=22.76 Aligned_cols=33 Identities=21% Similarity=0.155 Sum_probs=26.7
Q ss_pred EEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 012980 411 DMQILVAKDIIPDPELLAKCFEDSLLEMKEAAL 443 (452)
Q Consensus 411 ~l~i~~d~~~~~~~~~l~~~~~~~l~el~~~~~ 443 (452)
-.+|.-|++++.|.+.|.|++..++++-.+.+.
T Consensus 66 i~~I~Idp~~l~D~E~LeDLIiaA~NdA~~ka~ 98 (118)
T PRK14628 66 VKDIEIDEDLKEDFETLKDLLIAGMNEVMEKIE 98 (118)
T ss_pred EEEEEECHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 368888888888999999999999977665555
No 53
>PF15429 DUF4628: Domain of unknown function (DUF4628)
Probab=22.72 E-value=54 Score=30.00 Aligned_cols=20 Identities=40% Similarity=0.541 Sum_probs=17.5
Q ss_pred echHHHHHHHHHccCCchhHH
Q 012980 218 FSIDDMKAVKKAIAGATINDV 238 (452)
Q Consensus 218 ~~~~~lk~~a~~~~g~Tvndv 238 (452)
=+.+.+|.+.|+. |+.|||+
T Consensus 46 GsSQHLKNLGKAv-GAKVNDf 65 (273)
T PF15429_consen 46 GSSQHLKNLGKAV-GAKVNDF 65 (273)
T ss_pred cchHHHHHHHHHh-hhHHHHH
Confidence 3567899999999 9999994
No 54
>COG5435 Uncharacterized conserved protein [Function unknown]
Probab=22.60 E-value=2.1e+02 Score=24.27 Aligned_cols=48 Identities=6% Similarity=0.218 Sum_probs=39.1
Q ss_pred CCCceeEEEEEeeCCeEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHH
Q 012980 394 SLPHALTMHMMSYAGRADMQILVAKDIIPDPELLAKCFEDSLLEMKEA 441 (452)
Q Consensus 394 ~~~~~l~v~v~s~~g~l~l~i~~d~~~~~~~~~l~~~~~~~l~el~~~ 441 (452)
.-+..++|-+.+-+|+-.++++-.++.++..+.+.+++++.+..+.+-
T Consensus 17 w~DrSvNvf~~~~~gt~~~sfvIsRd~~~~g~~~~~y~~rql~~l~k~ 64 (147)
T COG5435 17 WQDRSVNVFVSGDNGTSGFSFVISRDPLEPGDTFPEYVQRQLALLRKQ 64 (147)
T ss_pred hccceEEEEEecCCCcceeEEEEecCCCCCCCcHHHHHHHHHHHHHhh
Confidence 346678888888888888999999888887788999999999888543
No 55
>PRK11856 branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed
Probab=22.01 E-value=43 Score=33.86 Aligned_cols=26 Identities=23% Similarity=0.174 Sum_probs=22.7
Q ss_pred EEEEeecccccccccHHHHHHHhccc
Q 012980 119 CAVFRIHHALGDGISLVSMLLAGCRL 144 (452)
Q Consensus 119 ~l~~~~HH~l~DG~s~~~l~~~l~~~ 144 (452)
-|.+.+||.+.||.-+.+++..+...
T Consensus 376 ~lslt~DHRviDG~~aa~Fl~~l~~~ 401 (411)
T PRK11856 376 PLSLSFDHRVIDGADAARFLKALKEL 401 (411)
T ss_pred EEeEEeehhhcCcHHHHHHHHHHHHH
Confidence 48899999999999999999877654
No 56
>PRK14623 hypothetical protein; Provisional
Probab=21.41 E-value=3.2e+02 Score=21.79 Aligned_cols=32 Identities=22% Similarity=0.243 Sum_probs=25.9
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 012980 412 MQILVAKDIIPDPELLAKCFEDSLLEMKEAAL 443 (452)
Q Consensus 412 l~i~~d~~~~~~~~~l~~~~~~~l~el~~~~~ 443 (452)
++|.-|++++.|.+.|.|++.+++.+-.+.+.
T Consensus 49 ~~i~Idp~~l~D~E~LeDLI~aAvn~A~~k~~ 80 (106)
T PRK14623 49 KSISIDDELLEDKEQLEDYLVLTLNKAIEKAT 80 (106)
T ss_pred EEEEECHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 67888888888999999999998877655554
No 57
>COG3655 Predicted transcriptional regulator [Transcription]
Probab=20.64 E-value=68 Score=23.65 Aligned_cols=23 Identities=17% Similarity=0.377 Sum_probs=20.1
Q ss_pred EeechHHHHHHHHHccCCchhHHH
Q 012980 216 ATFSIDDMKAVKKAIAGATINDVL 239 (452)
Q Consensus 216 ~~~~~~~lk~~a~~~~g~Tvndvl 239 (452)
..+.++.+.++|++. .|+++|++
T Consensus 41 k~I~~~tL~~iC~~L-eCqpgDil 63 (73)
T COG3655 41 KAIRLSTLEKICKAL-ECQPGDIL 63 (73)
T ss_pred ceeeHHHHHHHHHHc-CCChhhee
Confidence 357788999999999 99999975
Done!