Query 012980
Match_columns 452
No_of_seqs 122 out of 1175
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 19:56:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012980.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012980hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jgp_A Tyrocidine synthetase 3 99.9 9.7E-25 3.3E-29 225.8 35.9 389 4-440 94-508 (520)
2 1l5a_A Amide synthase, VIBH; n 99.9 1.5E-25 5.2E-30 226.5 28.7 376 9-441 1-407 (436)
3 1q9j_A PAPA5, polyketide synth 99.9 8.7E-26 3E-30 227.1 24.9 383 3-439 4-414 (422)
4 4hvm_A Tlmii; PSI-biology, mid 99.9 6.8E-24 2.3E-28 218.0 29.7 397 4-440 11-459 (493)
5 2vsq_A Surfactin synthetase su 99.9 7.2E-24 2.5E-28 241.2 25.3 386 5-440 11-430 (1304)
6 2xhg_A Tyrocidine synthetase A 99.9 2.8E-22 9.6E-27 204.2 28.6 401 6-446 17-461 (466)
7 3fot_A 15-O-acetyltransferase; 99.7 5.1E-15 1.7E-19 151.0 27.3 401 6-436 30-515 (519)
8 2bgh_A Vinorine synthase; VS, 98.5 2E-05 6.9E-10 78.5 23.5 267 6-325 25-321 (421)
9 4g22_A Hydroxycinnamoyl-COA sh 98.4 6.5E-06 2.2E-10 82.6 17.7 254 5-305 25-315 (439)
10 2xr7_A Malonyltransferase; xen 98.3 5.1E-05 1.7E-09 76.4 20.4 271 6-310 21-333 (453)
11 2e1v_A Acyl transferase; BAHD 98.0 0.00044 1.5E-08 69.5 19.7 264 5-311 25-332 (454)
12 2rkv_A Trichothecene 3-O-acety 97.6 0.0017 5.9E-08 65.0 17.6 269 7-305 5-317 (451)
13 3rqc_A Probable lipoamide acyl 94.6 0.89 3E-05 40.5 14.3 60 213-273 33-102 (224)
14 1q23_A Chloramphenicol acetylt 94.1 1.9 6.5E-05 38.2 15.3 60 213-273 34-97 (219)
15 2i9d_A Chloramphenicol acetylt 93.7 3 0.0001 36.8 15.7 60 213-273 31-95 (217)
16 1scz_A E2, dihydrolipoamide su 93.5 2 6.7E-05 38.5 14.4 37 214-251 32-78 (233)
17 3l60_A Branched-chain alpha-ke 92.9 1.5 5.2E-05 39.7 12.7 40 213-252 41-84 (250)
18 3cla_A Type III chloramphenico 92.8 1.9 6.6E-05 37.9 13.0 60 213-273 29-92 (213)
19 3mae_A 2-oxoisovalerate dehydr 92.5 2 6.8E-05 39.0 13.0 37 214-251 46-92 (256)
20 2ii3_A Lipoamide acyltransfera 92.2 2.6 9E-05 38.4 13.5 38 214-252 58-104 (262)
21 1dpb_A Dihydrolipoyl-transacet 92.2 4.2 0.00014 36.5 14.7 39 213-252 42-89 (243)
22 3b8k_A PDCE2;, dihydrolipoylly 91.7 2.5 8.4E-05 38.0 12.6 58 215-273 41-109 (239)
23 3dva_I Dihydrolipoyllysine-res 61.5 1.7 5.8E-05 42.7 0.0 175 215-445 227-428 (428)
24 2xt6_A 2-oxoglutarate decarbox 61.2 74 0.0025 35.1 12.9 40 213-253 12-61 (1113)
25 3qoq_A Alginate and motility r 55.6 17 0.00057 25.5 4.3 33 215-248 26-58 (69)
26 1baz_A ARC repressor; transcri 55.6 18 0.00061 23.8 4.3 28 220-248 19-46 (53)
27 2deb_A CPT II, carnitine O-pal 54.6 67 0.0023 33.2 10.6 68 365-444 581-648 (653)
28 1nla_A Transcriptional repress 51.0 22 0.00077 24.4 4.3 30 220-250 19-48 (64)
29 1p94_A Plasmid partition prote 45.6 30 0.001 24.7 4.4 32 214-246 40-71 (76)
30 1t1u_A Choline O-acetyltransfe 45.4 89 0.003 32.2 9.8 69 365-443 545-614 (639)
31 1nm8_A Carnitine O-acetyltrans 45.1 92 0.0031 31.9 9.8 71 365-445 529-600 (616)
32 2an7_A Protein PARD; bacterial 42.7 17 0.00058 26.1 2.7 26 218-244 11-36 (83)
33 2k9i_A Plasmid PRN1, complete 42.7 34 0.0012 22.0 4.2 35 215-254 16-50 (55)
34 3cla_A Type III chloramphenico 36.5 16 0.00056 31.9 2.2 24 119-142 182-205 (213)
35 2i9d_A Chloramphenicol acetylt 35.1 18 0.0006 31.8 2.2 23 119-141 190-212 (217)
36 1q23_A Chloramphenicol acetylt 34.1 19 0.00064 31.6 2.2 25 119-143 186-210 (219)
37 2gpe_A Bifunctional protein PU 32.6 88 0.003 19.9 4.9 33 215-248 10-42 (52)
38 2kel_A SVTR protein, uncharact 31.3 89 0.0031 20.6 4.7 32 215-247 20-51 (56)
39 1u9p_A PARC; unknown function; 27.5 71 0.0024 24.9 4.2 33 215-248 25-57 (120)
40 3rqc_A Probable lipoamide acyl 26.8 25 0.00085 30.9 1.8 31 119-149 188-218 (224)
41 2cpg_A REPA protein, transcrip 26.2 1.1E+02 0.0039 18.5 4.5 35 214-253 8-42 (45)
42 3b8k_A PDCE2;, dihydrolipoylly 25.3 29 0.001 30.8 2.0 25 119-143 205-229 (239)
43 1scz_A E2, dihydrolipoamide su 24.2 35 0.0012 30.2 2.2 25 119-143 197-221 (233)
44 1dpb_A Dihydrolipoyl-transacet 24.1 35 0.0012 30.4 2.3 25 119-143 209-233 (243)
45 2ay0_A Bifunctional PUTA prote 22.9 1.2E+02 0.004 20.2 4.2 33 216-253 11-43 (58)
46 1y9b_A Conserved hypothetical 21.9 1.4E+02 0.0049 21.8 4.9 34 220-254 17-51 (90)
47 2ii3_A Lipoamide acyltransfera 21.6 42 0.0014 30.3 2.2 25 119-143 225-249 (262)
48 3ign_A Diguanylate cyclase; gg 21.5 3.1E+02 0.011 21.8 8.0 120 212-334 39-164 (177)
49 3hva_A Protein FIMX; ggdef dig 21.4 3.1E+02 0.011 21.8 9.1 118 212-333 44-168 (177)
50 2bsq_E FITA, trafficking prote 21.0 1.2E+02 0.0042 21.5 4.1 28 220-248 13-40 (77)
51 3f42_A Protein HP0035; helicob 20.8 1.8E+02 0.0061 21.8 5.3 43 399-443 40-82 (99)
No 1
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=99.95 E-value=9.7e-25 Score=225.77 Aligned_cols=389 Identities=14% Similarity=0.131 Sum_probs=251.3
Q ss_pred CCCccCChhhhccc-----CCC-cceEEEEEEecCCCCChhHHHHHHHhhhcccCCCCceeeeeCCCCceeeee-cccCc
Q 012980 4 HPDEPLTPAGRLFL-----QPH-MNTIIHCVVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRE-TSVDI 76 (452)
Q Consensus 4 ~~~~~L~~~d~~~~-----~~~-~~~~~~~~~~~~~~ld~~~l~~al~~~~~~~~p~lr~~~~~~~~g~p~w~~-~~~d~ 76 (452)
+...|||+.|+.+| .+. ..+.+...+.++|++|.+.|++++...+. +||.||++++.. .|.++|+. ++.++
T Consensus 94 ~~~~pls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g~ld~~~l~~A~~~lv~-rh~~LRt~f~~~-~~~~~q~v~~~~~~ 171 (520)
T 2jgp_A 94 QAYYPVSSAQKRMYILDQFEGVGISYNMPSTMLIEGKLERTRVEAAFQRLIA-RHESLRTSFAVV-NGEPVQNIHEDVPF 171 (520)
T ss_dssp CSSEECCHHHHHHHHHHHHTCCTTTTBCCEEEEEEECCCHHHHHHHHHHHHH-HCGGGGEEEEEE-TTEEEEEECSCCCC
T ss_pred CCCCCCCHHHHHHHHHHhcCCCCCcccceEEEEECCCCCHHHHHHHHHHHHH-HhHhheeEEEee-CCEEEEEECCCCCC
Confidence 34569999999755 222 22333456788899999999999999999 999999999874 47788877 55444
Q ss_pred cccceeeCChhHHHHHHHhhhcCCCCCCC-CCCeEEEEEc---cceEEEEeecccccccccHHHHHHHhcccCCCCCCCC
Q 012980 77 DRHFVEVHDSTSVNDYVAGLSFSSPLSED-KPLWEVHVLA---EHRCAVFRIHHALGDGISLVSMLLAGCRLADDPEALP 152 (452)
Q Consensus 77 ~~hv~~l~~~~~l~~~~~~~~~~~pld~~-~PlW~~~lv~---~~~~l~~~~HH~l~DG~s~~~l~~~l~~~~~~~~~~~ 152 (452)
...+.. .+++++++ +.+...+ |||.+ .|+||+.+++ +++.+++.+||+++||+|...++.++...|... ..+
T Consensus 172 ~~~~~~-~~~~~~~~-~~~~~~~-~fdl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~el~~~Y~~~-~l~ 247 (520)
T 2jgp_A 172 ALAYSE-VTEEEARE-LVSSLVQ-PFDLEVAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSSGILLAEWVQLYQGD-VLP 247 (520)
T ss_dssp CCEEEE-CCHHHHHH-HHHHTCC-CCCTTSSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHHHHHHHHHHHHHTTC-CCC
T ss_pred ceEEEe-CCHHHHHH-HHHHhcC-CCCCCCCcceeEEEEEEcCCcEEEEEEccceeecHhHHHHHHHHHHHHHccC-CCC
Confidence 433333 23556666 6667788 99986 6999999998 578999999999999999999999998887432 111
Q ss_pred CCCCCCCCCCCCcc----chHHHHHHHHHHHHHHHHHHHHHhcccCCCC--CcccCCCCCC-CCCeEEEEEeec---hHH
Q 012980 153 AVAGGKRTESAGKI----GSLWGLLKMVLLSIVFVLEFLLRALWVSDRK--TAISGGAGVE-LWPRKLATATFS---IDD 222 (452)
Q Consensus 153 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~r~~~~~~~~---~~~ 222 (452)
..+.+......+.. .......+.+|.. .+....+. .|...+.... ..........++ .+.
T Consensus 248 ~~~~~~~d~~~~~~~~~~~~~~~~~~~yW~~----------~l~~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~~~~ 317 (520)
T 2jgp_A 248 ELRIQYKDFAVWQQEFSQSAAFHKQEAYWLQ----------TFADDIPVLNLPTDFTRPSTQSFAGDQCTIGAGKALTEG 317 (520)
T ss_dssp CCSCCHHHHHHHHHHHTTSHHHHHHHHHHHH----------HTSSCCCCCCCCCSSCCCSSCCCBEEEEEEECCHHHHHH
T ss_pred CCCCCHHHHHHHHHHhhcChhhHHHHHHHHH----------HhCCCCCcCCCCCCCCCCCCCCCCccEEEEeCCHHHHHH
Confidence 11110000000000 0000111233321 11111111 1211111100 001122233344 568
Q ss_pred HHHHHHHccCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCcchhhhhhccCCCCCCCceEEEEE
Q 012980 223 MKAVKKAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTRWGNKFGMLL 302 (452)
Q Consensus 223 lk~~a~~~~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~~~~~~~~~~~~~~~~~~~gN~~~~~~ 302 (452)
++++|+++ |+|++++++||++.+|++|... ..+.+++|++.|...+. ....|+++..+.
T Consensus 318 l~~~a~~~-~~T~~~~l~aa~a~~L~~~~~~---------~dv~~g~~~~gR~~~~~-----------~~~vG~f~n~lp 376 (520)
T 2jgp_A 318 LHQLAQAT-GTTLYMVLLAAYNVLLAKYAGQ---------EDIIVGTPITGRSHADL-----------EPIVGMFVNTLA 376 (520)
T ss_dssp HHHHHHHH-TCCHHHHHHHHHHHHHHHHHTC---------SCEEEEEEECCCCSGGG-----------TTCCSCCCEEEE
T ss_pred HHHHHHHc-CCCHHHHHHHHHHHHHHHhcCC---------CCeEEEeccCCCCchhh-----------hccEEeeeeeee
Confidence 99999999 9999999999999999999743 37999999999976432 257899988888
Q ss_pred EEccCCCCC-CCHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHhHHHHHHHhcccccceeEEEeccCCCCcceeec
Q 012980 303 LPIYYHKGG-ADPLSYVKRAKKMIDSKKLTLEGHFSYKIGNLVMSWFGAKVACLLNYRIVCNTTFTISNIVGPTEKITLA 381 (452)
Q Consensus 303 ~~l~~p~~~-~d~~~~l~~v~~~~~~~k~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~vSNv~g~~~~l~~~ 381 (452)
+.+ ..+. .++.+.++++++.+.....++...+. .+.. .++.. +.......++..+++.|.+ .....++
T Consensus 377 lr~--~~~~~~~~~~~l~~v~~~~~~~~~h~~~p~~-~i~~----~l~~~--r~~~~~~lf~~~~~~~~~~--~~~~~~~ 445 (520)
T 2jgp_A 377 MRN--KPQREKTFSEFLQEVKQNALDAYGHQDYPFE-ELVE----KLAIA--RDLSRNPLFDTVFTFQNST--EEVMTLP 445 (520)
T ss_dssp EEE--CCCTTSBHHHHHHHHHHHHHHHHHTCCSCHH-HHHH----HTCCC--CCTTSCSSCSEEEEEECCC--CSCCCCS
T ss_pred EEe--cCCCCCCHHHHHHHHHHHHHHHHHhccCCHH-HHHH----HhcCC--CCCCCCCcEEEEEEEecCC--CccccCC
Confidence 887 6554 56899999999999988887654332 2221 22211 0111233455556666654 3345566
Q ss_pred CCeeeEEeeccC--CCCceeEEEEEeeCCeEEEEEEecCCCCCC--HHHHHHHHHHHHHHHHH
Q 012980 382 DNPVAYLRANTS--SLPHALTMHMMSYAGRADMQILVAKDIIPD--PELLAKCFEDSLLEMKE 440 (452)
Q Consensus 382 g~~v~~~~~~~~--~~~~~l~v~v~s~~g~l~l~i~~d~~~~~~--~~~l~~~~~~~l~el~~ 440 (452)
|..++....... .....+.+.+..++|.+.+.+.++++.+++ .+.+.+.|...|.++..
T Consensus 446 ~~~~~~~~~~~~~~~~~~~L~l~~~~~~~~l~~~~~y~~~~~~~~~i~~l~~~~~~lL~~l~~ 508 (520)
T 2jgp_A 446 ECTLAPFMTDETGQHAKFDLTFSATEEREEMTIGVEYSTSLFTRETMERFSRHFLTIAASIVQ 508 (520)
T ss_dssp SEEEEECSSCSSCSBCSSSEEEEEEECSSCEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CceeEEeecCCCCcceeeeeEEEEEECCCeEEEEEEEChhhCCHHHHHHHHHHHHHHHHHHHh
Confidence 766554322222 445689999999999999999999999973 56667777666666643
No 2
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=99.95 E-value=1.5e-25 Score=226.49 Aligned_cols=376 Identities=13% Similarity=0.017 Sum_probs=243.8
Q ss_pred CChhhhccc-----CCCc-ceEEEEEEecCCCCChhHHHHHHHhhhcccCCCCceeeeeCCCCceeeeecccCcccccee
Q 012980 9 LTPAGRLFL-----QPHM-NTIIHCVVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRETSVDIDRHFVE 82 (452)
Q Consensus 9 L~~~d~~~~-----~~~~-~~~~~~~~~~~~~ld~~~l~~al~~~~~~~~p~lr~~~~~~~~g~p~w~~~~~d~~~hv~~ 82 (452)
||+.|+.+| .+.. .+.+..++.++|++|.+.|++++...+. +||.||++++.. .| ++.+..++..++..
T Consensus 1 Ls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g~ld~~~L~~A~~~lv~-rh~~LRt~f~~~-~~---~v~~~~~~~~~~~d 75 (436)
T 1l5a_A 1 MLLAQKPFWQRHLAYPHINLDTVAHSLRLTGPLDTTLLLRALHLTVS-EIDLFRARFSAQ-GE---LYWHPFSPPIDYQD 75 (436)
T ss_dssp CCGGGHHHHHHHHHSTTSCCSEEEEEEEEESSCCHHHHHHHHHHHHH-TCGGGGEEECTT-CC---EEECSSCCCCEEEE
T ss_pred CCHHHHHHHHHHHcCCCCCccceeEEEEEeCCCCHHHHHHHHHHHHH-HhheeEEEEEec-CC---eECCCcCCCccEEe
Confidence 688888755 2333 3444567888999999999999999999 999999999864 34 44433334333333
Q ss_pred e----CChhHHHHHHHhhhcCCCCCCC-CCCeEEEEEc---cceEEEEeecccccccccHHHHHHHhcccCCC---CCCC
Q 012980 83 V----HDSTSVNDYVAGLSFSSPLSED-KPLWEVHVLA---EHRCAVFRIHHALGDGISLVSMLLAGCRLADD---PEAL 151 (452)
Q Consensus 83 l----~~~~~l~~~~~~~~~~~pld~~-~PlW~~~lv~---~~~~l~~~~HH~l~DG~s~~~l~~~l~~~~~~---~~~~ 151 (452)
+ ..++++.+++.+...+ |||.+ .|+|++.+++ +++.+++.+||+++||+|...++.++...|.. +...
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~-~fdl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~~ 154 (436)
T 1l5a_A 76 LSIHLEAEPLAWRQIEQDLQR-SSTLIDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTP 154 (436)
T ss_dssp CTTCTTHHHHHHHHHHHHHTS-CCCCBTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred CCCCCCHHHHHHHHHHHHhcC-CCCcCCCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCCC
Confidence 2 2234578888889999 99986 5999999997 67899999999999999999999999887731 1111
Q ss_pred CCCCCCCCCCCC---Cc----cchHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccCCCCCCCCCeEEEEEeec---hH
Q 012980 152 PAVAGGKRTESA---GK----IGSLWGLLKMVLLSIVFVLEFLLRALWVSDRKTAISGGAGVELWPRKLATATFS---ID 221 (452)
Q Consensus 152 ~~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~ 221 (452)
+. + ...... .. ........+.+|... +.. ..+...+..+..............++ .+
T Consensus 155 ~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~------l~~----~~~~~~lp~~~~~~~~~~~~~~~~l~~~~~~ 221 (436)
T 1l5a_A 155 TA-A--FKPYQSYLEEEAAYLTSHRYWQDKQFWQGY------LRE----APDLTLTSATYDPQLSHAVSLSYTLNSQLNH 221 (436)
T ss_dssp CC-C--CCCHHHHHHHHHHHHTSHHHHHHHHHHHHH------HHT----SCCCCBCCTTCCGGGCCEEEEEEECCHHHHH
T ss_pred CC-C--ccCHHHHHHHHHHhhccHhHHHHHHHHHHH------hcC----CCCcccCCCCCCCCcccceeeEEecCHHHHH
Confidence 11 1 110000 00 000011123344321 111 00111111111100001112222333 56
Q ss_pred HHHHHHHHccCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCcchhhhhhccCCCCCCCceEEEE
Q 012980 222 DMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTRWGNKFGML 301 (452)
Q Consensus 222 ~lk~~a~~~~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~~~~~~~~~~~~~~~~~~~gN~~~~~ 301 (452)
.++++|+++ |+|++++++||++.+|++|.+ . .+.+++|++.|...+. ....|+++..+
T Consensus 222 ~l~~~a~~~-~~t~~~~l~aa~~~~L~~~~g-~---------dv~ig~~~~~R~~~~~-----------~~~vG~f~n~l 279 (436)
T 1l5a_A 222 LLLKLANAN-QIGWPDALVALCALYLESAEP-D---------APWLWLPFMNRWGSVA-----------ANVPGLMVNSL 279 (436)
T ss_dssp HHHHHHHHT-TCCHHHHHHHHHHHHHHHHST-T---------CCEEEEEECCCTTSGG-----------GGSCSCCCEEE
T ss_pred HHHHHHHHh-CCCHHHHHHHHHHHHHHHhhC-C---------ceEEeeecccCCChHH-----------hcCcceEEEEE
Confidence 899999999 999999999999999999964 2 6889999999976432 24688888888
Q ss_pred EEEccCCCCC-CCHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHhHHHHHHHhcccccceeEEEeccCCCCcceee
Q 012980 302 LLPIYYHKGG-ADPLSYVKRAKKMIDSKKLTLEGHFSYKIGNLVMSWFGAKVACLLNYRIVCNTTFTISNIVGPTEKITL 380 (452)
Q Consensus 302 ~~~l~~p~~~-~d~~~~l~~v~~~~~~~k~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~vSNv~g~~~~l~~ 380 (452)
.+.+ ..+. .++.+.++++++.+.....++...+.. +.. .++.. ......++..+++.|.+.+ .+
T Consensus 280 plr~--~~~~~~t~~~~l~~v~~~~~~~~~h~~~~~~~-i~~----~l~~~----~~~~~lf~~~~~~~~~~~~----~~ 344 (436)
T 1l5a_A 280 PLLR--LSAQQTSLGNYLKQSGQAIRSLYLHGRYRIEQ-IEQ----DQGLN----AEQSYFMSPFINILPFESP----HF 344 (436)
T ss_dssp EEEC--CCCTTCBHHHHHHHHHHHHHHHHHTTTSCHHH-HHH----HTTCC----TTCCBCCCSEEEEECCCCC----CC
T ss_pred EEEE--ecCCCCCHHHHHHHHHHHHHHHhhhcCCCHHH-HHH----Hhccc----ccCCCccceEEEeeccCcc----cc
Confidence 8887 6554 468999999999999888877643332 221 22211 0112345555566655432 56
Q ss_pred cCCeeeEEeeccCCCCceeEEEEE-eeCCeEEEEEEecCCCCCC--HHHHHHHHHHHHHHHHHH
Q 012980 381 ADNPVAYLRANTSSLPHALTMHMM-SYAGRADMQILVAKDIIPD--PELLAKCFEDSLLEMKEA 441 (452)
Q Consensus 381 ~g~~v~~~~~~~~~~~~~l~v~v~-s~~g~l~l~i~~d~~~~~~--~~~l~~~~~~~l~el~~~ 441 (452)
+|..++.......... .+.+.+. ..+|.+.+.+.++++.+++ .+.+.+.|...|.++...
T Consensus 345 ~~~~~~~~~~~~~~~~-~l~l~v~~~~~~~l~~~~~y~~~~~~~~~i~~l~~~~~~~l~~l~~~ 407 (436)
T 1l5a_A 345 ADCQTELKVLASGSAE-GINFTFRGSPQHELCLDITADLASYPQSHWQSHCERFPRFFEQLLAR 407 (436)
T ss_dssp TTCEEEEEEEEECCCC-SEEEEEEECTTSCEEEEEEEETTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeeEEEecCCCCcc-ceEEEEEecCCCcEEEEEEeChhhCCHHHHHHHHHHHHHHHHHHHhc
Confidence 7777765443322222 7888888 6789999999999999974 666777777777776554
No 3
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=99.94 E-value=8.7e-26 Score=227.10 Aligned_cols=383 Identities=12% Similarity=0.043 Sum_probs=237.8
Q ss_pred CCCCccCChhhhcccCCCcceEEEEEEecCCCCChhHHHHHHHhhhcccCCCCceeeeeCCCCceeeee-cccCcc-ccc
Q 012980 3 SHPDEPLTPAGRLFLQPHMNTIIHCVVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRE-TSVDID-RHF 80 (452)
Q Consensus 3 ~~~~~~L~~~d~~~~~~~~~~~~~~~~~~~~~ld~~~l~~al~~~~~~~~p~lr~~~~~~~~g~p~w~~-~~~d~~-~hv 80 (452)
.....|||+.|+.||..+ +.+...+.++|++|.+.|++++...+. +||.||++++.. .+.++++. +..+.. ..+
T Consensus 4 ~~~~~pls~~Q~~~~~~~--y~~~~~~~l~g~ld~~~l~~A~~~lv~-rh~~LRt~f~~~-~~~~~q~v~~~~~~~~~~~ 79 (422)
T 1q9j_A 4 GSVIRKLSHSEEVFAQYE--VFTSMTIQLRGVIDVDALSDAFDALLE-THPVLASHLEQS-SDGGWNLVADDLLHSGICV 79 (422)
T ss_dssp TSEEEECCHHHHHHHHTT--CEEEEEEEEESCCCHHHHHHHHHHHHH-HCGGGSEEEEEC-TTSSEEEEECCSSSCCCEE
T ss_pred CceeecCCHHHHHHHhcC--ceEEEEEEEecCCCHHHHHHHHHHHHH-hCccceEEEEec-CCcceeeeccCCCCCceEE
Confidence 345689999999988543 445567788899999999999999999 999999999875 45564443 443333 122
Q ss_pred eeeCChhHHHHHHHhhhcCCCCCCCCCCeEEEEEc--cceEEEEeecccccccccHHHHHHHhcccCCC----CCCCCCC
Q 012980 81 VEVHDSTSVNDYVAGLSFSSPLSEDKPLWEVHVLA--EHRCAVFRIHHALGDGISLVSMLLAGCRLADD----PEALPAV 154 (452)
Q Consensus 81 ~~l~~~~~l~~~~~~~~~~~pld~~~PlW~~~lv~--~~~~l~~~~HH~l~DG~s~~~l~~~l~~~~~~----~~~~~~~ 154 (452)
..+...++.+.+. + ... +||.+.|+|++.+++ +++.+++.+||+++||+|+..++.++...|.. ....+..
T Consensus 80 ~d~~~~~~~~~~~-~-~~~-~~d~~~pl~r~~l~~~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~Y~~~~~~~~~~~~~ 156 (422)
T 1q9j_A 80 IDGTAATNGSPSG-N-AEL-RLDQSVSLLHLQLILREGGAELTLYLHHCMADGHHGAVLVDELFSRYTDAVTTGDPGPIT 156 (422)
T ss_dssp EC--------------CCC-CCCTTTCSEEEEEECCSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHHSSSCCCCC
T ss_pred EECCCCCcchhhh-c-ccC-ccCCCCCcEEEEEEecCCCeEEEEEeceEEEchhhHHHHHHHHHHHHHHhhccCCCCCCC
Confidence 2221111112222 2 357 898567999999998 68899999999999999999999998876631 1111100
Q ss_pred CCCCCCCCCCccchHHHH--------------HHHHHHHHHHHHHHHHHhcccCCCCCcccCCCCCC-CC-CeEEEEEee
Q 012980 155 AGGKRTESAGKIGSLWGL--------------LKMVLLSIVFVLEFLLRALWVSDRKTAISGGAGVE-LW-PRKLATATF 218 (452)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~r~~~~~~~ 218 (452)
+.+..... .+.... .+.+|..... . ....|...+.... .. ...+.....
T Consensus 157 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~------~-----~~~lp~~~~~~~~~~~~~~~~~l~~~ 221 (422)
T 1q9j_A 157 PQPTPLSM----EAVLAQRGIRKQGLSGAERFMSVMYAYEIP------A-----TETPAVLAHPGLPQAVPVTRLWLSKQ 221 (422)
T ss_dssp CCCCCBCH----HHHHHHSSCCC-----CTTSSTTTTCC------------------------CCSBCCCCEEEECCCHH
T ss_pred CCCCCCCH----HHHHHhcCCcccccchhhhhhhhhhcccCC------C-----cccCCCCCCCCCCCCccceEEEeCHH
Confidence 11111000 000000 0122321100 0 0000111010000 00 122223333
Q ss_pred chHHHHHHHHHccCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCcchhhhhhccCCCCCCCceE
Q 012980 219 SIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTRWGNKF 298 (452)
Q Consensus 219 ~~~~lk~~a~~~~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~~~~~~~~~~~~~~~~~~~gN~~ 298 (452)
..+.++++|+++ |+|++++++||++.+|++|. ..+ ...+.+++|++.|...... .......|.+
T Consensus 222 ~~~~l~~~a~~~-~~t~~~~l~aa~~~~l~r~~-~~~------~~~v~~g~~~~~R~~~~~~--------~~~~~~~~~v 285 (422)
T 1q9j_A 222 QTSDLMAFGREH-RLSLNAVVAAAILLTEWQLR-NTP------HVPIPYVYPVDLRFVLAPP--------VAPTEATNLL 285 (422)
T ss_dssp HHHHHHHHHTTT-TCCHHHHHHHHHHHHHHHHH-TCS------SCCEEEEEEEETTTTSSSC--------CCTTTBSCCE
T ss_pred HHHHHHHHHHHh-CCCHHHHHHHHHHHHHHhcc-cCC------CceEEEeeeeecccccCCC--------CChhhhhhhh
Confidence 357899999999 99999999999999999982 112 2479999999999763200 0002467888
Q ss_pred EEEEEEccCCCCC-CCHHHHHHHHHHHHHHhhhccchhhhHH-HHHHHHHHHhHHHHHHHhcccccceeEEEeccCCCCc
Q 012980 299 GMLLLPIYYHKGG-ADPLSYVKRAKKMIDSKKLTLEGHFSYK-IGNLVMSWFGAKVACLLNYRIVCNTTFTISNIVGPTE 376 (452)
Q Consensus 299 ~~~~~~l~~p~~~-~d~~~~l~~v~~~~~~~k~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~vSNv~g~~~ 376 (452)
|.+...+ |+.. .++.+.++++++.+.....++....... +.. +...+. ....+ .++++|+++...
T Consensus 286 G~f~n~l--p~~~~~~~~~~l~~v~~~~~~~~~~~~~~~~~l~~~~-i~~~~~-------~~~pl---~~~~~n~~~~~~ 352 (422)
T 1q9j_A 286 GAASYLA--EIGPNTDIVDLASDIVATLRADLANGVIQQSGLHFGT-AFEGTP-------PGLPP---LVFCTDATSFPT 352 (422)
T ss_dssp EEEEEEE--CCCSSCCHHHHHHHHHHHHHHHHHHTHHHHSCCBGGG-GGGCCC-------SSSCC---CEEEECCCCCCS
T ss_pred eeeeeee--eccCCCCHHHHHHHHHHHHHHHHhcCeeeecccchHH-HhcccC-------CCCCc---eEEEecCCcCCC
Confidence 8888888 6655 5789999999999988877765321100 000 001111 01111 578999987655
Q ss_pred ceeecCCeeeEEeeccC-CCCceeEEE-EEeeCCeEEEEEEecCCCCCCHHHHHHHHHHHHHHHH
Q 012980 377 KITLADNPVAYLRANTS-SLPHALTMH-MMSYAGRADMQILVAKDIIPDPELLAKCFEDSLLEMK 439 (452)
Q Consensus 377 ~l~~~g~~v~~~~~~~~-~~~~~l~v~-v~s~~g~l~l~i~~d~~~~~~~~~l~~~~~~~l~el~ 439 (452)
...++|..++.+..... .....+.+. +.+++|.+.+.+ ++++ ...+.+.+.|...|.+++
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~-y~~~--~~~~~l~~~~~~~L~~l~ 414 (422)
T 1q9j_A 353 MRTPPGLEIEDIKGQFYCSISVPLDLYSCAVYAGQLIIEH-HGHI--AEPGKSLEAIRSLLCTVP 414 (422)
T ss_dssp CCCCTTCEEEEEEEEECCBSSCCCCEEEEEEETTEEEEEE-ESSC--SSHHHHHHHHHHHHHHTT
T ss_pred CCCCCCceeEeeecccccCCCCCceEEEEEeeCCeEEEEE-ecCc--cchHHHHHHHHHHHHHhh
Confidence 55678888887665432 344567777 778999999999 9987 778888888888887764
No 4
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=99.93 E-value=6.8e-24 Score=217.95 Aligned_cols=397 Identities=10% Similarity=-0.004 Sum_probs=231.1
Q ss_pred CCCccCChhhhccc-----CCCcceEEEEEEecCCCCChhHHHHHHHhhhcccCCCCceeeeeCCCCceeeee-cccCcc
Q 012980 4 HPDEPLTPAGRLFL-----QPHMNTIIHCVVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRE-TSVDID 77 (452)
Q Consensus 4 ~~~~~L~~~d~~~~-----~~~~~~~~~~~~~~~~~ld~~~l~~al~~~~~~~~p~lr~~~~~~~~g~p~w~~-~~~d~~ 77 (452)
+...|||+.|+.+| .+...+.+..++.++|++|.+.|++++...+. +||.||++++.. .|.|+ +. +.. +.
T Consensus 11 ~~~~Pls~~Q~~~~~~~~~~~~~~y~~~~~~~l~g~ld~~~L~~A~~~lv~-rh~~LRt~f~~~-~~~~~-~v~~~~-~~ 86 (493)
T 4hvm_A 11 PGLRRASFLQRGAWRWLREAPPAAAFAARGLLGSGRIDDDRLAAAADEVLD-AFPLLRVNFVDD-DGLWM-RTRENA-DA 86 (493)
T ss_dssp -CEEECCHHHHHHHHHHTTSCGGGGEEEEEEEEESSCCHHHHHHHHHHHHH-HCGGGGEEEEES-SSEEE-EECSCC-CC
T ss_pred CCCCCCCHHHHHHHHHHhhCCCCcceeEEEEEEeCCCCHHHHHHHHHHHHH-hchhceeEEEcc-CCEEE-EecCCC-CC
Confidence 44569999999855 23333455678889999999999999999999 999999999985 57777 54 444 44
Q ss_pred ccceee---CC-hhHHHHHHHhhhcCCCCCCCC-CCeEEEEEc---cceEEEEeecccccccccHHHHHHHhcccCCCCC
Q 012980 78 RHFVEV---HD-STSVNDYVAGLSFSSPLSEDK-PLWEVHVLA---EHRCAVFRIHHALGDGISLVSMLLAGCRLADDPE 149 (452)
Q Consensus 78 ~hv~~l---~~-~~~l~~~~~~~~~~~pld~~~-PlW~~~lv~---~~~~l~~~~HH~l~DG~s~~~l~~~l~~~~~~~~ 149 (452)
.++..+ .. ++++.+++.+...+ |||.+. |+|++.+++ +++.+++.+||+++||+|+..++.+|...|. ..
T Consensus 87 ~~~~d~~~~~~~~~~~~~~~~~~~~~-~fdl~~~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~l~~~l~~~Y~-g~ 164 (493)
T 4hvm_A 87 LVRSDLRGHPDPQARCVELLRADRDR-PTDPERDPLVRLHLVRLSETDVVLGVVAHQMLLDARSRYMVLGAVWQAYY-GR 164 (493)
T ss_dssp EEEEECTTSSSHHHHHHHHHHHHHSS-CCCTTTSCSEEEEEEECSSSEEEEEEEEETTTCCHHHHHHHHHHHHHHHT-TC
T ss_pred ceEEECCCCCchHHHHHHHHHHHhcC-CCCCCCCCeEEEEEEEECCCcEEEEEecchhhccHHHHHHHHHHHHHHhC-CC
Confidence 333333 12 26788899999999 999864 999999998 5689999999999999999999999998872 22
Q ss_pred CCCCCCCCCCCCCCC------ccchHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccCCCCCCCCCeEEEEEeechHHH
Q 012980 150 ALPAVAGGKRTESAG------KIGSLWGLLKMVLLSIVFVLEFLLRALWVSDRKTAISGGAGVELWPRKLATATFSIDDM 223 (452)
Q Consensus 150 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~l 223 (452)
..+ .+....... .........+.+|... +.. ..+......+... .....+....-..+.+
T Consensus 165 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~------l~~----~~~l~~~~~~~~~-~~~~~~~l~~~~~~~l 230 (493)
T 4hvm_A 165 FRP---AQYRDFAEVADFHPLDRETVRVARHRWWSRR------LPA----LPVRGGDGGPVGP-PETSRLRVPGSRWQAL 230 (493)
T ss_dssp CCG---GGSBCGGGTTTCCTTCSHHHHHHHHHHHHHH------GGG----SCCCC-------C-CEEEEEEEEHHHHHHH
T ss_pred CCC---cCHHHHHHHHhhhhcccChhhHHHHHHHHHh------ccC----CCCCCCCCCCCCC-CeeEEEEcCHHHHHHH
Confidence 211 111111110 0111122234566521 111 0110000011000 0022233444446778
Q ss_pred HHHHHHccCCc--hhHHHHHHHHHHHHHHHhhh---CCCCCCCCcceEEEEEeeeccCCCcchhhhhhccCCCCCCCceE
Q 012980 224 KAVKKAIAGAT--INDVLFGVVSSGLSRYLDHR---SPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTRWGNKF 298 (452)
Q Consensus 224 k~~a~~~~g~T--vndvllAa~a~al~~~~~~~---~~~~~~~~~~l~~~vPv~lR~~~~~~~~~~~~~~~~~~~~gN~~ 298 (452)
+++|+++ |+| ++++++||++.+|++|.... .... .....+.+++|++.|...+. ....|+++
T Consensus 231 ~~~a~~~-~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~-~g~~dv~~g~~~~gR~~~~~-----------~~~vG~f~ 297 (493)
T 4hvm_A 231 TEPGGPL-GGNGSLAMAALTAWWLWTQGAGTGTDTGAGTG-TGKDSLYLSTEVDLRDHLQL-----------GSVVGPLT 297 (493)
T ss_dssp HCC-------CHHHHHHHHHHHHHHHC-----------------CEEEEEEEEEHHHHTTC-----------CSBCSCCE
T ss_pred HHHHHHc-CCCchHHHHHHHHHHHHHHHhhhcccccccCc-CCCCCEEEEeeccCCCCcch-----------hcCeEeee
Confidence 8899999 999 99999999999999991110 0000 11248999999999976432 35788888
Q ss_pred EEEEEEccCCCCC---CCHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHhHHHHHHHhcccccceeEEEeccCCC-
Q 012980 299 GMLLLPIYYHKGG---ADPLSYVKRAKKMIDSKKLTLEGHFSYKIGNLVMSWFGAKVACLLNYRIVCNTTFTISNIVGP- 374 (452)
Q Consensus 299 ~~~~~~l~~p~~~---~d~~~~l~~v~~~~~~~k~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~vSNv~g~- 374 (452)
..+.+.+ ..+. .++.+.++++++.+.....+ ...+. .+..+. ..++.. +.......++..+++.|.+..
T Consensus 298 n~lplr~--~~~~~~~~t~~~~l~~v~~~~~~~~~h-~~p~~-~i~~~~-~~l~~~--~~~~~~~lf~~~~~~~~~~~~~ 370 (493)
T 4hvm_A 298 DRVVFGV--DLTGLREPSFRDLMSRTQAGFLDAVVH-YLPYH-DVVDLA-VDLGVV--TPPRVAARWDVAVHLCRNAPSS 370 (493)
T ss_dssp EEEEEEE--ECTTCSSCBHHHHHHHHHHHHHHHHHT-CCCHH-HHHHHH-HHTTSC--BTTBTTGGGCEEECC-------
T ss_pred ceeEEEE--ecCCCcCCCHHHHHHHHHHHHHHHHhh-cCCHH-HHHHHH-hhhCcc--cCCCCCcceeEEEEEEecCCcc
Confidence 8887777 5543 46899999999999999888 54332 233210 011110 001122334445555554321
Q ss_pred -----CcceeecCCeeeEEeec---c--------------CCCCceeEEEEEeeCCeEEEEEEecCCCCC-CHHHHHHHH
Q 012980 375 -----TEKITLADNPVAYLRAN---T--------------SSLPHALTMHMMSYAGRADMQILVAKDIIP-DPELLAKCF 431 (452)
Q Consensus 375 -----~~~l~~~g~~v~~~~~~---~--------------~~~~~~l~v~v~s~~g~l~l~i~~d~~~~~-~~~~l~~~~ 431 (452)
...+...|..++.+... + ...+..+.+.+..++|.+.+.+.+++++++ ..+.+.+.|
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~l~v~~~~~~l~~~~~y~~~l~~~~i~~l~~~~ 450 (493)
T 4hvm_A 371 SLTRGERTLAELGVSIELFREADLIGGDTRSATDTWDGTDTWDGTTTDLSVGELGEDMVIVLDQRRTHPAGGGSALLDGL 450 (493)
T ss_dssp -------------CEEEECSHHHHCC-------CCTTCCCCCCCCCEEEEEEEETTEEEEEEEECC-------CHHHHHH
T ss_pred ccccccccccCCCceeeeccccccccccccccccccccccccCCcceEEEEEEeCCeEEEEEEEccccCHHHHHHHHHHH
Confidence 12233445555543220 0 122333889999999999999999999773 245667777
Q ss_pred HHHHHHHHH
Q 012980 432 EDSLLEMKE 440 (452)
Q Consensus 432 ~~~l~el~~ 440 (452)
...|.+++.
T Consensus 451 ~~~L~~~~~ 459 (493)
T 4hvm_A 451 DAAMAQAVA 459 (493)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 776666643
No 5
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=99.92 E-value=7.2e-24 Score=241.18 Aligned_cols=386 Identities=11% Similarity=0.021 Sum_probs=247.5
Q ss_pred CCccCChhhhccc-----CCCcc-eEEEEEEecCCCCChhHHHHHHHhhhcccCCCCceeeeeCCCCceeeee-cccCcc
Q 012980 5 PDEPLTPAGRLFL-----QPHMN-TIIHCVVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRE-TSVDID 77 (452)
Q Consensus 5 ~~~~L~~~d~~~~-----~~~~~-~~~~~~~~~~~~ld~~~l~~al~~~~~~~~p~lr~~~~~~~~g~p~w~~-~~~d~~ 77 (452)
...|||+.|+.+| ++... +.+...+.++|++|.+.|++++...+. +||.||++++....+.|+++. ++.++.
T Consensus 11 d~~PLS~~Q~~lw~~~~~~~~~~~Y~~~~~~~l~g~ld~~~l~~A~~~lv~-rH~~LRt~f~~~~~~~p~Q~v~~~~~~~ 89 (1304)
T 2vsq_A 11 DMYYLSPMQEGMLFHAILNPGQSFYLEQITMKVKGSLNIKCLEESMNVIMD-RYDVFRTVFIHEKVKRPVQVVLKKRQFH 89 (1304)
T ss_dssp EEEECCHHHHHHHHHHHHSTTSCTTEEEEEEEEEECCCHHHHHHHHHHHHH-HCGGGGEEEECSSCSSCEEEEESCCCCC
T ss_pred CcCCCCHHHHHHHHHHhhCCCCCceEEEEEEEEcCCcCHHHHHHHHHHHHH-hhhhceEEEEEcCCCeEEEEECCCCCCc
Confidence 3469999999865 34333 344567889999999999999999999 999999999875445688777 555554
Q ss_pred ccceee--CC----hhHHHHHHHhhhcCCCCCCCC-CCeEEEEEc---cceEEEEeecccccccccHHHHHHHhcccCCC
Q 012980 78 RHFVEV--HD----STSVNDYVAGLSFSSPLSEDK-PLWEVHVLA---EHRCAVFRIHHALGDGISLVSMLLAGCRLADD 147 (452)
Q Consensus 78 ~hv~~l--~~----~~~l~~~~~~~~~~~pld~~~-PlW~~~lv~---~~~~l~~~~HH~l~DG~s~~~l~~~l~~~~~~ 147 (452)
.++..+ .+ ++++++++++...+ |||.++ |+||+.+++ +++.+++.+||+++||+|+..+++++.+.|..
T Consensus 90 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~fdl~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~ 168 (1304)
T 2vsq_A 90 IEEIDLTHLTGSEQTAKINEYKEQDKIR-GFDLTRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNA 168 (1304)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHHHHHH-CCCTTTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEECCCCCchhHHHHHHHHHHHHhcC-CCCCCCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHH
Confidence 434333 11 34677888888899 999975 999999998 68899999999999999999999998887631
Q ss_pred --CCCCCCCCCCCCCCCCCccchH----HHHHHHHHHHHHHHHHHHHHhcccCCCCCcccCCCCCCCCCeEEEEEee---
Q 012980 148 --PEALPAVAGGKRTESAGKIGSL----WGLLKMVLLSIVFVLEFLLRALWVSDRKTAISGGAGVELWPRKLATATF--- 218 (452)
Q Consensus 148 --~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--- 218 (452)
....+..+.. +... ....++ ....+.+|... +.. ... ....|..................+
T Consensus 169 ~~~g~~~~l~~~-~~y~-d~~~~~~~~~~~~~~~yW~~~------L~~-~~~-~~~lp~~~~~~~~~~~~~~~~~~l~~~ 238 (1304)
T 2vsq_A 169 LREQKPYSLPPV-KPYK-DYIKWLEKQDKQASLRYWREY------LEG-FEG-QTTFAEQRKKQKDGYEPKELLFSPSEA 238 (1304)
T ss_dssp HHTTCCCCCCCC-CCTH-HHHHHHHTSCHHHHHHHHHHH------HTT-CCC-CCTTTTTCCCSSCCCCEEEEEECCCHH
T ss_pred hhcCCCCCCCCc-ccHH-HHHHHHhcchhhHHHHHHHHH------hCC-CCc-cccCCCCCCccccccCcceEEEecCHH
Confidence 0111111111 1000 000000 11123455421 111 000 001111110000000111122223
Q ss_pred chHHHHHHHHHccCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccC--CCcchhhhhhccCCCCCCCc
Q 012980 219 SIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQ--PGLQDLSNLMKSNSGTRWGN 296 (452)
Q Consensus 219 ~~~~lk~~a~~~~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~--~~~~~~~~~~~~~~~~~~gN 296 (452)
..++++++|+++ |+|++++++||++.+|++|..+ ..+.+++|++.|.. .+. ....|+
T Consensus 239 ~~~~L~~~a~~~-~~T~~~vllaa~a~~L~r~tg~---------~dvv~G~pvsgR~~~~~~~-----------~~~vG~ 297 (1304)
T 2vsq_A 239 ETKAFTELAKSQ-HTTLSTALQAVWSVLISRYQQS---------GDLAFGTVVSGRPAEIKGV-----------EHMVGL 297 (1304)
T ss_dssp HHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHTC---------SEEEEEEEECCCCTTSTTG-----------GGCCSS
T ss_pred HHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhcCC---------CCEEEEEEeCCCCccchhh-----------hccccc
Confidence 367899999999 9999999999999999999743 37999999999976 322 245788
Q ss_pred eEEEEEEEccCCCCC-CCHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHhHHHHHHHhcccccceeEEEeccCCCC
Q 012980 297 KFGMLLLPIYYHKGG-ADPLSYVKRAKKMIDSKKLTLEGHFSYKIGNLVMSWFGAKVACLLNYRIVCNTTFTISNIVGPT 375 (452)
Q Consensus 297 ~~~~~~~~l~~p~~~-~d~~~~l~~v~~~~~~~k~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~vSNv~g~~ 375 (452)
++..+.+.+ ..+. .++.+.|+++++.+.....++...+.. +. ..++ ....++..+++.|.+...
T Consensus 298 fvntlplr~--~~~~~~s~~~ll~~v~~~~~~a~~hq~~p~~~-i~----~~l~--------~~~lf~~~~~~~~~~~~~ 362 (1304)
T 2vsq_A 298 FINVVPRRV--KLSEGITFNGLLKRLQEQSLQSEPHQYVPLYD-IQ----SQAD--------QPKLIDHIIVFENYPLQD 362 (1304)
T ss_dssp CCEEEEEEE--ECCTTCBHHHHHHHHHHHHHHHGGGTTSCHHH-HH----HSSS--------CSSSCCCEEEECSSCHHH
T ss_pred ceeEEEEEe--cCCCCCcHHHHHHHHHHHHHHhhhcccCCHHH-HH----HHhC--------CCcccceeEEEeeccccc
Confidence 888877777 5544 567999999999999888887643322 22 1111 234566677788865321
Q ss_pred c---ceeecCCeeeEEeeccCCCCceeEEEEEeeCCeEEEEEEecCCCCCC--HHHHHHHHHHHHHHHHH
Q 012980 376 E---KITLADNPVAYLRANTSSLPHALTMHMMSYAGRADMQILVAKDIIPD--PELLAKCFEDSLLEMKE 440 (452)
Q Consensus 376 ~---~l~~~g~~v~~~~~~~~~~~~~l~v~v~s~~g~l~l~i~~d~~~~~~--~~~l~~~~~~~l~el~~ 440 (452)
. .....|..+..+... ......+++.+. .++.+.+.+.+++++++. .+++.+.|...|.++..
T Consensus 363 ~~~~~~~~~g~~~~~~~~~-~~~~~dL~l~~~-~~~~l~~~~~y~~~lf~~~~i~~l~~~~~~lL~~l~~ 430 (1304)
T 2vsq_A 363 AKNEESSENGFDMVDVHVF-EKSNYDLNLMAS-PGDEMLIKLAYNENVFDEAFILRLKSQLLTAIQQLIQ 430 (1304)
T ss_dssp HSCCCHHHHSEEEEEEEEC-CCCCSSEEEEEE-CSSSCEEEEEEETTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccCCceeEeeecc-cccccCeEEEEe-cCCcEEEEEEECCccCCHHHHHHHHHHHHHHHHHhcc
Confidence 1 112234444443322 233456777664 478899999999999973 56677777766666643
No 6
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=99.91 E-value=2.8e-22 Score=204.23 Aligned_cols=401 Identities=13% Similarity=0.034 Sum_probs=232.7
Q ss_pred CccCChhhhccc---CCC-cceEEEEEEecCCCCChhHHHHHHHhhhcccCCCCceeeeeCCCCceeeee-cccCccccc
Q 012980 6 DEPLTPAGRLFL---QPH-MNTIIHCVVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRE-TSVDIDRHF 80 (452)
Q Consensus 6 ~~~L~~~d~~~~---~~~-~~~~~~~~~~~~~~ld~~~l~~al~~~~~~~~p~lr~~~~~~~~g~p~w~~-~~~d~~~hv 80 (452)
..|||+.|++|+ .+. ..+++...+.++|++|.+.|++++...+. +||.||+++... .|.++|+. +..+...++
T Consensus 17 ~~pls~~Q~~~~~~~~~~~~~y~~~~~~~l~g~ld~~~L~~Al~~lv~-rh~~LRt~f~~~-~~~~~q~v~~~~~~~~~~ 94 (466)
T 2xhg_A 17 NVPLTPIQKWFFGKNFTNTGHWNQSSVLYRPEGFDPKVIQSVMDKIIE-HHDALRMVYQHE-NGNVVQHNRGLGGQLYDF 94 (466)
T ss_dssp ECCCCHHHHHHHHTTCTTTTCBEEEEEEEETTCCCHHHHHHHHHHHHH-HSGGGGEEEECG-GGCCEEEECCSSSCCCEE
T ss_pred CCCCCHHHHHHHhCCCCCcCcceeEEEEEcCCCCCHHHHHHHHHHHHH-hChHhheEEecC-CCceeeecccccccccee
Confidence 359999999654 222 34445567889999999999999999999 999999999874 46677766 422333333
Q ss_pred ee--e---CChhHHHHHHHhhhcCCCCCCC-CCCeEEEEEc--cceEEEEeecccccccccHHHHHHHhcccCCCC--CC
Q 012980 81 VE--V---HDSTSVNDYVAGLSFSSPLSED-KPLWEVHVLA--EHRCAVFRIHHALGDGISLVSMLLAGCRLADDP--EA 150 (452)
Q Consensus 81 ~~--l---~~~~~l~~~~~~~~~~~pld~~-~PlW~~~lv~--~~~~l~~~~HH~l~DG~s~~~l~~~l~~~~~~~--~~ 150 (452)
.. + .+.++..+.+.+...+ |||.+ .|+|++.+++ ++..+++.+||+++||+|...++.++...|... ..
T Consensus 95 ~~~d~~~~~~~~~~~~~~~~~~~~-~fdl~~~pl~r~~l~~~~~~~~l~l~~HH~i~Dg~S~~~l~~el~~~Y~~~~~g~ 173 (466)
T 2xhg_A 95 FSYNLTAQPDVQQAIEAETQRLHS-SMNLQEGPLVKVALFQTLHGDHLFLAIHHLVVDGISWRILFEDLATGYAQALAGQ 173 (466)
T ss_dssp EEEECTTCSCHHHHHHHHHHHHHT-TCCTTTCCCEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCCcccHHHHHHHHHHHHHh-ccCCCCCCeEEEEEEEcCCCCEEEEEeeeeeechhhHHHHHHHHHHHHHHHHcCC
Confidence 33 3 2222222334455678 99986 5999999998 444588999999999999999999988766210 11
Q ss_pred CCCCCCCCCCCCCCccchHH--------HHHHHHHHHHHHHHHHHHHhcccCCCCCcccCCCCCC-CCCeEEEEEeech-
Q 012980 151 LPAVAGGKRTESAGKIGSLW--------GLLKMVLLSIVFVLEFLLRALWVSDRKTAISGGAGVE-LWPRKLATATFSI- 220 (452)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~- 220 (452)
.+..+....... ....+.. ...+.+|... +... +.+..|...+.... ..........++-
T Consensus 174 ~~~l~~~~~~y~-~~~~~~~~~~~~~~~~~~~~~W~~~------l~~~---~~~~lp~~~~~~~~~~~~~~~~~~~l~~~ 243 (466)
T 2xhg_A 174 AISLPEKTDSFQ-SWSQWLQEYANEADLLSEIPYWESL------ESQA---KNVSLPKDYEVTDCKQKSVRNMRIRLHPE 243 (466)
T ss_dssp CCCCCCCCSCHH-HHHHHHHHHTTSHHHHTTHHHHHHH------HHHC---CCCCCCCSSCCSSCBGGGEEEEEEECCHH
T ss_pred CCCCCCCCCCHH-HHHHHHHHHhcCccchhhhHHHHHh------hccC---CcccCCccccccccccccceEEEEEcCHH
Confidence 111111111000 0000000 0112444421 1110 11111221111100 0011222334443
Q ss_pred --HHHHHHH-HHccCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCcchhhhhhccCCCCCCCce
Q 012980 221 --DDMKAVK-KAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTRWGNK 297 (452)
Q Consensus 221 --~~lk~~a-~~~~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~~~~~~~~~~~~~~~~~~~gN~ 297 (452)
+.+++.+ +++ |+|++++++||++.+|++|... ..+.+++|++.|...... .+.....|++
T Consensus 244 ~~~~l~~~~~~~~-~~t~~~~llaa~~~~l~~~~~~---------~dv~ig~~~~gR~~~~~~-------~~~~~~vG~f 306 (466)
T 2xhg_A 244 ETEQLLKHANQAY-QTEINDLLLAALGLAFAEWSKL---------AQIVIHLEGHGREDIIEQ-------ANVARTVGWF 306 (466)
T ss_dssp HHHHHHHTGGGTT-TCCHHHHHHHHHHHHHHHHHCC---------SEEEEEEEECCCCSCSTT-------CCCTTCCSCC
T ss_pred HHHHHHHHhHHhh-CCCHHHHHHHHHHHHHHHHhCC---------CceEEEecCCCCCccccC-------CCccccccce
Confidence 4455544 578 9999999999999999999743 379999999999763100 0023568888
Q ss_pred EEEEEEEccCCCCC-CCHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHhHHHHHHHhcccccceeEEEeccCCCCc
Q 012980 298 FGMLLLPIYYHKGG-ADPLSYVKRAKKMIDSKKLTLEGHFSYKIGNLVMSWFGAKVACLLNYRIVCNTTFTISNIVGPTE 376 (452)
Q Consensus 298 ~~~~~~~l~~p~~~-~d~~~~l~~v~~~~~~~k~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~vSNv~g~~~ 376 (452)
+..+.+.+ ..+. .++.+.++++++.+...+ +... .+.+.. .+...... .-........++|+..+....
T Consensus 307 ~n~lplr~--~~~~~~~~~~~l~~v~~~~~~~~-~~~~--~~~~~~----~l~~~~~~-~~~~~~~~p~~~f~~~~~~~~ 376 (466)
T 2xhg_A 307 TSQYPVLL--DLKQTAPLSDYIKLTKENMRKIP-RKGI--GYDILK----HVTLPENR-GSLSFRVQPEVTFNYLGQFDA 376 (466)
T ss_dssp CEEEEEEE--ECSCCCSHHHHHHHHHHHHHHSG-GGGT--HHHHHH----HTSCGGGS-TTCCCCCCCSEEEEEEEECCT
T ss_pred eeeccEEE--ecCCCCCHHHHHHHHHHHHHhCc-cCCc--ccceee----eccccccc-ccccccCCCeEEEeecCcccc
Confidence 88887777 5544 578999999999987653 2221 111111 11110000 000001111234443332222
Q ss_pred ceeecCCeeeEEee---c---------c-CCCCceeEEEEEeeCCeEEEEEEecCCCCC--CHHHHHHHHHHHHHHHHHH
Q 012980 377 KITLADNPVAYLRA---N---------T-SSLPHALTMHMMSYAGRADMQILVAKDIIP--DPELLAKCFEDSLLEMKEA 441 (452)
Q Consensus 377 ~l~~~g~~v~~~~~---~---------~-~~~~~~l~v~v~s~~g~l~l~i~~d~~~~~--~~~~l~~~~~~~l~el~~~ 441 (452)
....++..+..+.. . + ......+.+.+...+|.+.+.+.+++++++ ..+.+.+.|...|.++...
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~y~~~~~~~~~i~~l~~~~~~~L~~l~~~ 456 (466)
T 2xhg_A 377 DMRTELFTRSPYSGGNTLGADGKNNLSPESEVYTALNITGLIEGGELVLTFSYSSEQYREESIQQLSQSYQKHLLAIIAH 456 (466)
T ss_dssp TCSSSSCEECTTCTTCCSSTTCTTSBCTTSBCCCSEEEEEEEETTEEEEEEEEETTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCceecccccCccccCcccccccccccCcceeEEEEEEEECCEEEEEEEEChhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 22222322221100 0 0 112456888888889999999999999997 4677888888888888776
Q ss_pred Hhhcc
Q 012980 442 ALTSK 446 (452)
Q Consensus 442 ~~~~~ 446 (452)
...+|
T Consensus 457 ~~~~~ 461 (466)
T 2xhg_A 457 CLQSH 461 (466)
T ss_dssp HHHHH
T ss_pred hcccc
Confidence 65443
No 7
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=99.70 E-value=5.1e-15 Score=151.04 Aligned_cols=401 Identities=12% Similarity=0.021 Sum_probs=200.6
Q ss_pred CccCChhhhccc------CCCcceEEEEEEecCCCC----C----hhHHHHHHHhhhcccCCCCceeeeeCCCCceeeee
Q 012980 6 DEPLTPAGRLFL------QPHMNTIIHCVVGFERPI----D----VPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRE 71 (452)
Q Consensus 6 ~~~L~~~d~~~~------~~~~~~~~~~~~~~~~~l----d----~~~l~~al~~~~~~~~p~lr~~~~~~~~g~p~w~~ 71 (452)
.|++...|++|. +.+...++.+-+++..++ + .+.|++|+...=- .||.+.+.+..+..+.+.|+.
T Consensus 30 ~R~~~g~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~~l~~~lr~AW~~lR~-~hP~iA~~v~~d~~~~~~~~Y 108 (519)
T 3fot_A 30 QRRCVGAEAIVGLEEKNRRALYDLYIATSLRNIAPASTLLTLQNLKEMFELALLDARF-EHPECACTVSWDDEVPAIITY 108 (519)
T ss_dssp EEECCTHHHHHHCHHHHTTTTTCEEEEEEEEECCCTTCCCCHHHHHHHHHHHHHHHHH-HCGGGGCEEECCSSSSCEEEE
T ss_pred EeecCccHHHHHHhhhcCCCcceEEEEEEEEecCCCCccccHHHHHHHHHHHHHHHHh-hCCcceeEEeeCCCCcccEEE
Confidence 467888888866 244566666666665443 3 3456666665444 899999998764222344443
Q ss_pred --c--ccCcc-c---cceeeCChhHHHHHHHhh------hcCCCCCCCCCCeEEEEEc----------c--ceEEEEeec
Q 012980 72 --T--SVDID-R---HFVEVHDSTSVNDYVAGL------SFSSPLSEDKPLWEVHVLA----------E--HRCAVFRIH 125 (452)
Q Consensus 72 --~--~~d~~-~---hv~~l~~~~~l~~~~~~~------~~~~pld~~~PlW~~~lv~----------~--~~~l~~~~H 125 (452)
+ +-+++ | -++.+.+...-+++..++ .+. ..+. +.+.+++|. + +..|+|+.|
T Consensus 109 ~~~~~~~~~~~Wl~~Tf~v~~~~~t~~e~~~~~~~~r~~~~~--~~p~-~~~~l~~v~~~~~~~~~~p~~~~~~lv~~~~ 185 (519)
T 3fot_A 109 ESPESNESARDWARGCIHVQPTAKSALDLWSEMEEGRAAAND--NTPS-KSIELFLLSDVSTDSTPIPQDATVEILFHSN 185 (519)
T ss_dssp ECCSSHHHHHHHHHHHEEEEECSCCHHHHHHHHHHHHHHTC---CCCC-CSCEEEEEESSSSTTSCCCTTCEEEEEEEEC
T ss_pred ecCCCHHHHHHHHHhcEEEeCCCCCHHHHHHhhhhhhccccc--CCCc-cceEEEEEeccccccccCCCCceEEEEEEeC
Confidence 1 11221 1 011112222223333222 222 1123 788999963 3 679999999
Q ss_pred ccccccccHHHHHHHhcccCCCCC------CCCCC---------CCCCCCCC--CCcc---chHHHHHHHHHHHHHHHHH
Q 012980 126 HALGDGISLVSMLLAGCRLADDPE------ALPAV---------AGGKRTES--AGKI---GSLWGLLKMVLLSIVFVLE 185 (452)
Q Consensus 126 H~l~DG~s~~~l~~~l~~~~~~~~------~~~~~---------~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~ 185 (452)
|.+.||+|+..++..+++...++. ..+.+ +++. ... .+.. ......++.+...+ ..
T Consensus 186 H~~~DG~g~~~f~~~ll~~L~~~~~~~~~~~~~~~~~g~E~~~L~P~~-e~~~~~p~~~~~~e~~~~~~~~~~~~---~~ 261 (519)
T 3fot_A 186 HLFWDGIGCRKFVGDLFRLVGSYIGRSDSREMKKIQWGQEIKNLSPPV-VDSLKLDINTLGSEFDDKCTEYTSAL---VA 261 (519)
T ss_dssp GGGCCHHHHHHHHHHHHHHHTTSTTC-CGGGSCCCCTTTTGGGSCCCT-GGGBSSCGGGCCHHHHHHHHHHHHHH---HH
T ss_pred ceeEchHhHHHHHHHHHHHHHhhhccCCccCCCcCCCCcccccCCcCH-HHHhCCCCCCCCHHHHHHHHHHHHHh---hc
Confidence 999999999998887776432211 11111 1110 000 0100 00111122222111 11
Q ss_pred HHHHhcccCCCCCcccCCCCCCCCCeEEEEEeec---hHHHHHHHHHc--cCCchhHHHHHHHHHHHHHHHhhhCCCCCC
Q 012980 186 FLLRALWVSDRKTAISGGAGVELWPRKLATATFS---IDDMKAVKKAI--AGATINDVLFGVVSSGLSRYLDHRSPNALP 260 (452)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~lk~~a~~~--~g~TvndvllAa~a~al~~~~~~~~~~~~~ 260 (452)
.. . .-..|++.... ..+.....++ +++|++.||++ +|+|||.++.||++.++.++..... .+
T Consensus 262 ~~-~-----~~~~P~~~~~~----~~~~~~~~ls~~~t~~L~~~ck~~~~~g~Tvt~~l~Aa~~~al~~~~~~~~---~~ 328 (519)
T 3fot_A 262 NY-K-----SRGMKFQPGLA----LPRCVIHKLSADESIDIVKAVKTRLGPGFTISHLTQAAIVLALLDHLKPND---LS 328 (519)
T ss_dssp HH-H-----SCCSBCCCCCC----CEEEEEEECCHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHC-------CC
T ss_pred CC-C-----cccCCCCCCCC----CcceEEEEcCHHHHHHHHHHHHhcCCCCeeHHHHHHHHHHHHHHhhcCCcc---cC
Confidence 10 0 11122322212 2223334444 56788888886 6999999999999999998754211 12
Q ss_pred CCcceEEEEEeeeccCCCcchhhhhhccCCCCCCCceEEEEEEEccC--C-CCCCCHHHH-----HHHHHHHHHHhhhc-
Q 012980 261 EGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTRWGNKFGMLLLPIYY--H-KGGADPLSY-----VKRAKKMIDSKKLT- 331 (452)
Q Consensus 261 ~~~~l~~~vPv~lR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~l~~--p-~~~~d~~~~-----l~~v~~~~~~~k~~- 331 (452)
+...+.+.+|||+|++.+.+.. ....+.....+.+.++. + ++..++.+. +.++.+.+++....
T Consensus 329 ~~~~~~~~~pvnlR~~l~~~~~--------~n~~~~~~~~~~~~v~~i~~~~~~~~~~e~~~~~~~~~~ar~l~~~y~~~ 400 (519)
T 3fot_A 329 DDEVFISPTSVDGRRWLREDIA--------SNFYAMCQTAAVVRIENLKSITVSHKDEKELQVRALESACRNIKKSYRQW 400 (519)
T ss_dssp TTCCEEEEEEEECGGGBCHHHH--------TSCCSCCEEEEEEEECCGGGGCCCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccEEEEeeeeccccCCCccc--------ccccceeeeeeeeEecCccccccccchhhhhhHhHHHHHHHHHHHHhhcc
Confidence 3347999999999998753200 01123344444444421 0 111112122 23333333221111
Q ss_pred cchhhhHHHHHHHHHHHhHHHHHHHhcccccceeEEEeccCCCC--cceeec-------CCeeeEEeeccCCCCceeEEE
Q 012980 332 LEGHFSYKIGNLVMSWFGAKVACLLNYRIVCNTTFTISNIVGPT--EKITLA-------DNPVAYLRANTSSLPHALTMH 402 (452)
Q Consensus 332 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~vSNv~g~~--~~l~~~-------g~~v~~~~~~~~~~~~~l~v~ 402 (452)
...... .+++++.+-+....+...........+..+||+|... -+-.++ ..+|+++++........+++.
T Consensus 401 ~~np~i-~~l~~~~k~~~~~l~~~~~~~~~~~~tp~lSslG~vd~~lp~~y~~~~~~~~~~~V~~~~~~~~~~~~~~~~~ 479 (519)
T 3fot_A 401 LENPFL-QALGLRVHNFEASYLHAKPIPFEGEANPLFISDGINERFIPHEIKQTATGENVLSVESIDFVVNQSLPYLAIR 479 (519)
T ss_dssp HTCTTH-HHHHHHHHHHHHHHHHHCSSCCCSBCCCEEEEEEEGGGTSCSEEEETTTTEEEEEEEEEEEEECCCSSSCEEE
T ss_pred cCCchH-HHhHHHHHHHHHHHhcccCCCCCCccCcccccCCccccccchhhccccCCCCceEEEEEEEEccccCCceEEE
Confidence 000111 1121111111111111110001112467899998665 444555 256777766543345567899
Q ss_pred EEeeCCeEEEEEEecCCCCC--CHHHHHHHHHHHHH
Q 012980 403 MMSYAGRADMQILVAKDIIP--DPELLAKCFEDSLL 436 (452)
Q Consensus 403 v~s~~g~l~l~i~~d~~~~~--~~~~l~~~~~~~l~ 436 (452)
+.||+|+|+|+++++..... .++.+++.+.+.|.
T Consensus 480 ~~Tf~g~L~l~~~yn~a~~~~e~v~~~l~~v~~~L~ 515 (519)
T 3fot_A 480 LDSWRDASTLNIIYNDANYTEAEVQKYLQSIVEFML 515 (519)
T ss_dssp EEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEECCEEEEEEEeccccCCHHHHHHHHHHHHHHHH
Confidence 99999999999999998774 23334444444443
No 8
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=98.51 E-value=2e-05 Score=78.55 Aligned_cols=267 Identities=8% Similarity=0.003 Sum_probs=140.9
Q ss_pred CccCChhhhcccCCCcceEEEEEEecCCC------CChhHHHHHHHhhhcccCCCCceeeeeC-----CCCceeeee--c
Q 012980 6 DEPLTPAGRLFLQPHMNTIIHCVVGFERP------IDVPKSKDAVMSSIMVRHPRFRSVLVRD-----KRGLEHWRE--T 72 (452)
Q Consensus 6 ~~~L~~~d~~~~~~~~~~~~~~~~~~~~~------ld~~~l~~al~~~~~~~~p~lr~~~~~~-----~~g~p~w~~--~ 72 (452)
..+||.+|... ...++..+.+|..... ...+.|+++|.+.+. .||-|.-|++.. ...+-.+++ .
T Consensus 25 ~~~LS~lD~~~--~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~-~~~plAGRl~~~~~i~c~~~Gv~fv~A~~ 101 (421)
T 2bgh_A 25 CYKISHLDQLL--LTCHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLT-HFYPLAGRINVNSSVDCNDSGVPFVEARV 101 (421)
T ss_dssp CCBCCHHHHTS--CSSEEEEEEEECCCSSCCCCHHHHHHHHHHHHHHHTT-TSGGGGSEEETTTEEECCCCCEEEEEEEE
T ss_pred ccCCChHHhcc--cccccceEEEEeCCCccccchhhHHHHHHHHHHHHhh-hcchhccccCCCcEEEEcCCceEEEEEEE
Confidence 56899999863 2334434444443222 136889999999999 999999888641 112333444 2
Q ss_pred ccCccccceeeCChhHHHHHHHhhhcCCCC-------CCCCCCeEEEEE--c-cceEEEEeecccccccccHHHHHHHhc
Q 012980 73 SVDIDRHFVEVHDSTSVNDYVAGLSFSSPL-------SEDKPLWEVHVL--A-EHRCAVFRIHHALGDGISLVSMLLAGC 142 (452)
Q Consensus 73 ~~d~~~hv~~l~~~~~l~~~~~~~~~~~pl-------d~~~PlW~~~lv--~-~~~~l~~~~HH~l~DG~s~~~l~~~l~ 142 (452)
+.+++++.....+...++ ++... .. ..+.|+..+.+- . |+.+|.+.+||+++||.|+.+++....
T Consensus 102 d~~l~~~~~~~p~~~~~~----~l~p~-~~~~~~~~~~~~~pll~vQvt~f~cgG~~lg~~~~H~v~Dg~~~~~fl~~wa 176 (421)
T 2bgh_A 102 QAQLSQAIQNVVELEKLD----QYLPS-AAYPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFLNAWT 176 (421)
T ss_dssp SSCHHHHHSCCSSGGGGG----GGSSS-CSSSSSSSCCCTTCSEEEEEEECTTSCEEEEEEEETTTCCHHHHHHHHHHHH
T ss_pred cCCHHHHhccCCChHHHH----hcCCC-CCCccccccccCCceEEEEEEEEcCCCEEEEEEeeEEechHHHHHHHHHHHH
Confidence 222322211000111222 22222 11 223677655554 4 899999999999999999999998665
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccCCCCCCCCCeEEEEEeechHH
Q 012980 143 RLADDPEALPAVAGGKRTESAGKIGSLWGLLKMVLLSIVFVLEFLLRALWVSDRKTAISGGAGVELWPRKLATATFSIDD 222 (452)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 222 (452)
...... ..+ . .+ .. ..+ . . +... . ..+..+ ..... .......-.++-++
T Consensus 177 ~~~rg~-~~~--~--~P-~~----dr~-~-----------~---l~p~-~-~~~~~~--~~~~~--~~~~~~~f~f~~~~ 225 (421)
T 2bgh_A 177 ATCRGE-TEI--V--LP-NF----DLA-A-----------R---HFPP-V-DNTPSP--ELVPD--ENVVMKRFVFDKEK 225 (421)
T ss_dssp HHHTTC-SCC--C--CC-BC----SHH-H-----------H---HSCC-C-TTCCCC--CCCCC--SSEEEEEEEECHHH
T ss_pred HHhcCC-CCC--C--CC-cc----ccc-c-----------c---cCCC-c-ccCCCC--ccCCc--cceEEEEEEECHHH
Confidence 433211 111 1 11 00 000 0 0 0000 0 011001 00000 01122344455555
Q ss_pred HHHHHHHc------cCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCcchhhhhhccCCCCCCCc
Q 012980 223 MKAVKKAI------AGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTRWGN 296 (452)
Q Consensus 223 lk~~a~~~------~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~~~~~~~~~~~~~~~~~~~gN 296 (452)
+.++++.. +.+|-+|++.|.+-.++.+-.....+ + .....+.++||+|+..++. =+....||
T Consensus 226 i~~LK~~a~~~~~~~~~St~d~l~A~iW~~~~~Ar~~~~~---~-~~~~~l~~~vd~R~rl~pp--------lP~~y~GN 293 (421)
T 2bgh_A 226 IGALRAQASSASEEKNFSRVQLVVAYIWKHVIDVTRAKYG---A-KNKFVVVQAVNLRSRMNPP--------LPHYAMGN 293 (421)
T ss_dssp HHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHHHSC---C-CSCEEEEEEEESGGGSSSC--------CCTTBCSC
T ss_pred HHHHHHHhhccCCCCCCchhHhHHHHHHHHHHHHhcccCC---C-CCceEEEEEecCccccCCC--------CCCCccce
Confidence 55544432 14899999999877777655433211 1 2478899999999876421 03468999
Q ss_pred eEEEEEEEccCCCCCC-CHHHHHHHHHHHH
Q 012980 297 KFGMLLLPIYYHKGGA-DPLSYVKRAKKMI 325 (452)
Q Consensus 297 ~~~~~~~~l~~p~~~~-d~~~~l~~v~~~~ 325 (452)
.+....... ..+.. +.......+++.+
T Consensus 294 ~~~~~~~~~--~~~~~~~l~~~a~~ir~ai 321 (421)
T 2bgh_A 294 IATLLFAAV--DAEWDKDFPDLIGPLRTSL 321 (421)
T ss_dssp CEEEEEEEE--CTTCCCCGGGGHHHHHHHT
T ss_pred EEEEEEEEe--cccccccHHHHHHHHHHHH
Confidence 999888777 65442 2333334444433
No 9
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=98.43 E-value=6.5e-06 Score=82.60 Aligned_cols=254 Identities=12% Similarity=-0.008 Sum_probs=131.2
Q ss_pred CCccCChhhhcccCCCcceEEEEEEecCC---CCChhHHHHHHHhhhcccCCCCceeeeeCCCCceeeeec---------
Q 012980 5 PDEPLTPAGRLFLQPHMNTIIHCVVGFER---PIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRET--------- 72 (452)
Q Consensus 5 ~~~~L~~~d~~~~~~~~~~~~~~~~~~~~---~ld~~~l~~al~~~~~~~~p~lr~~~~~~~~g~p~w~~~--------- 72 (452)
...+||++|..+.. .++..+.+|..++ ....+.|+++|.+.+. .|+-|.-|++....|+++....
T Consensus 25 ~~~~LS~lD~~~~~--~~~~~~~~y~~~~~~~~~~~~~Lk~sLs~~L~-~f~plAGRl~~~~~g~~~i~c~~~Gv~fv~A 101 (439)
T 4g22_A 25 RNLWNSNVDLVVPN--FHTPSVYFYRPTGSSNFFDAKVLKDALSRALV-PFYPMAGRLKRDEDGRIEIECNGEGVLFVEA 101 (439)
T ss_dssp CEECCCHHHHSCCT--TCCCEEEEECCCSCTTTTCHHHHHHHHHHHTT-TTGGGGCEEEECTTSCEEEECCCCCEEEEEE
T ss_pred CeecCChhHhCccc--cceeeEEEEcCCCCccccHHHHHHHHHHHHHh-hccccceeeeeCCCCCEEEEECCCCCEEEEE
Confidence 45689999987433 3343444554422 1346999999999999 9998998988653344443221
Q ss_pred --ccCccccceeeCChhHHHHHHHhhhcCCCCC---CCCCCeEEEEEc---cceEEEEeecccccccccHHHHHHHhccc
Q 012980 73 --SVDIDRHFVEVHDSTSVNDYVAGLSFSSPLS---EDKPLWEVHVLA---EHRCAVFRIHHALGDGISLVSMLLAGCRL 144 (452)
Q Consensus 73 --~~d~~~hv~~l~~~~~l~~~~~~~~~~~pld---~~~PlW~~~lv~---~~~~l~~~~HH~l~DG~s~~~l~~~l~~~ 144 (452)
+.+++++-. ......+ .++.-..+.+ .+.|+..+.+-. |+.+|.+.+||+++||.|+.+++......
T Consensus 102 ~~d~~l~~l~~-~~p~~~~----~~l~p~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~~~H~v~Dg~~~~~Fl~~wa~~ 176 (439)
T 4g22_A 102 ESDGVVDDFGD-FAPTLEL----RRLIPAVDYSQGISSYALLVLQVTYFKCGGVSLGVGMRHHAADGFSGLHFINSWSDM 176 (439)
T ss_dssp EESSCGGGGTT-CCCCGGG----GGGSCCCCTTSCTTSSCSEEEEEEECTTSCEEEEEEECTTTCCHHHHHHHHHHHHHH
T ss_pred EcCCcHHHhcC-CCCCHHH----HhcCCCCCcccccccCceeEEEEEEecCCCEEEEEEeeeccCcHHHHHHHHHHHHHH
Confidence 112221110 0111122 2222110111 135777666554 89999999999999999999999865543
Q ss_pred CC-CCCCC-CCC-----CCC-CCCCCCCccchHHHHHHHHHHHHHHHHHHHHHhcccCC-CCCccc--CCCCCCCCCeEE
Q 012980 145 AD-DPEAL-PAV-----AGG-KRTESAGKIGSLWGLLKMVLLSIVFVLEFLLRALWVSD-RKTAIS--GGAGVELWPRKL 213 (452)
Q Consensus 145 ~~-~~~~~-~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~r~~ 213 (452)
.. .+... |.+ ... ++.....+... ..... +..... ..... ....
T Consensus 177 ~rg~~~~~~P~~dr~~l~~~~pp~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~---~~~~ 231 (439)
T 4g22_A 177 ARGLDVTLPPFIDRTLLRARDPPQPQFQHIEY----------------------QPPPALAVSPQTAASDSVP---ETAV 231 (439)
T ss_dssp HTTCCCSSCCBCCGGGGCCCSSCCCSSCCGGG----------------------SCCC------------------CEEE
T ss_pred hCCCCCCCCCccccccccCCCCCCCCcCcccc----------------------cCCCCCcccccccccCCcc---cceE
Confidence 21 11111 110 000 00000000000 00000 000000 00000 1122
Q ss_pred EEEeechHHHHHHHHH---c---cCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCcchhhhhhc
Q 012980 214 ATATFSIDDMKAVKKA---I---AGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMK 287 (452)
Q Consensus 214 ~~~~~~~~~lk~~a~~---~---~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~~~~~~~~~~~~ 287 (452)
..-.++-++|.++++. . +.+|-+|++.|.+-.++.+-. + ........+.++||+|+..+++
T Consensus 232 ~~f~fs~~~i~~LK~~a~~~~~~~~~St~dal~A~iWr~~~rAr---~---~~~~~~~~l~~~vd~R~rl~Pp------- 298 (439)
T 4g22_A 232 SIFKLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKAR---G---LEVDQGTKLYIATDGRARLRPS------- 298 (439)
T ss_dssp EEEEECHHHHHHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHHHT---T---CCTTCEEEEEEEEECTTTSSSC-------
T ss_pred EEEEECHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHHHhc---C---CCCCCcEEEEEEEcccCCCCCC-------
Confidence 2334554444444432 2 148999999998766655432 2 1222578999999999876521
Q ss_pred cCCCCCCCceEEEEEEEc
Q 012980 288 SNSGTRWGNKFGMLLLPI 305 (452)
Q Consensus 288 ~~~~~~~gN~~~~~~~~l 305 (452)
-++...||.+.......
T Consensus 299 -lp~~Y~GN~v~~~~~~~ 315 (439)
T 4g22_A 299 -LPPGYFGNVIFTATPIA 315 (439)
T ss_dssp -CCTTBCSCCEEEECCEE
T ss_pred -CCCCcccceeehhhcce
Confidence 03467999988776665
No 10
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=98.29 E-value=5.1e-05 Score=76.40 Aligned_cols=271 Identities=12% Similarity=0.043 Sum_probs=141.7
Q ss_pred CccCChhhhcccCCCcceEEEEEEecCCCCC------hhHHHHHHHhhhcccCCCCceeeeeCC--CCceeeeecccCcc
Q 012980 6 DEPLTPAGRLFLQPHMNTIIHCVVGFERPID------VPKSKDAVMSSIMVRHPRFRSVLVRDK--RGLEHWRETSVDID 77 (452)
Q Consensus 6 ~~~L~~~d~~~~~~~~~~~~~~~~~~~~~ld------~~~l~~al~~~~~~~~p~lr~~~~~~~--~g~p~w~~~~~d~~ 77 (452)
..+||+.|..+.. ..++..+.+|......+ .+.|+++|.+.+. .||-|.-|++... .|+++....+ .
T Consensus 21 ~~~LS~lD~~~~~-~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~-~~~plAGRl~~~~~~~g~~~i~c~~---~ 95 (453)
T 2xr7_A 21 TLPLTYFDHVWLA-FHRMRRILFYKLPISRPDFVQTIIPTLKDSLSLTLK-YYLPLAGNVACPQDWSGYPELRYVT---G 95 (453)
T ss_dssp EEECCHHHHGGGG-SCCEEEEEEEECCCCSHHHHHTHHHHHHHHHHHHHT-TSGGGGSCCEEESSTTCCCEEEEET---T
T ss_pred eECCCHHHhhhhh-cCCccEEEEEeCCCCCchhHHHHHHHHHHHHHHHhh-hccccCeeEEccCCCCCCEEEEecC---C
Confidence 3578888887542 12344444555433211 5889999999999 9999999987642 4555443321 0
Q ss_pred cccee-e-CChhHHHHHHH----------hhhcCCCCCC---C-----CCCeEE--EEEc-cceEEEEeecccccccccH
Q 012980 78 RHFVE-V-HDSTSVNDYVA----------GLSFSSPLSE---D-----KPLWEV--HVLA-EHRCAVFRIHHALGDGISL 134 (452)
Q Consensus 78 ~hv~~-l-~~~~~l~~~~~----------~~~~~~pld~---~-----~PlW~~--~lv~-~~~~l~~~~HH~l~DG~s~ 134 (452)
.-|.. . ..+..+.++.. .+.. ..+. + .|+..+ ..+. |+.+|.+.+||+++||.|+
T Consensus 96 ~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p--~~~~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~~~H~v~Dg~~~ 173 (453)
T 2xr7_A 96 NSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVP--QLAEPKDAPGVQLAPVLAIQVTLFPNHGISIGFTNHHVAGDGATI 173 (453)
T ss_dssp CCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSC--CCCCCEEETTEEECCCEEEEEEEETTTEEEEEEEECTTTCCSHHH
T ss_pred CceEEEEEecCCCHHHhhccCCCChhhhhcCCC--CCCCcccccccccCCeEEEEEEEccCCcEEEEEeeeeeeechhHH
Confidence 11222 1 11223333321 1111 1111 1 566544 4455 8999999999999999999
Q ss_pred HHHHHHhcccCC--C-CC-CCCCC-CCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHhcccCCCCC-cc-cCCCCCC
Q 012980 135 VSMLLAGCRLAD--D-PE-ALPAV-AGGKRTESAGKIGSLWGLLKMVLLSIVFVLEFLLRALWVSDRKT-AI-SGGAGVE 207 (452)
Q Consensus 135 ~~l~~~l~~~~~--~-~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~ 207 (452)
.+++........ . +. ..+.. |.-.+....... .+. ...+ ... . ..+.. +. .......
T Consensus 174 ~~Fl~~wa~~~r~G~~~~~~~~~~~P~~dr~~l~~p~-~~~---~~~~-------~~~----~-~~~~~~~~~~~~~~~~ 237 (453)
T 2xr7_A 174 VKFVRAWALLNKFGGDEQFLANEFIPFYDRSVIKDPN-GVG---MSIW-------NEM----K-KYKHMMKMSDVVTPPD 237 (453)
T ss_dssp HHHHHHHHHHHHTTTCGGGSCGGGSCBCCCSSSCCSS-CHH---HHTT-------TTG----G-GCTTTSCCSCCCCCCS
T ss_pred HHHHHHHHHHhhcCCCcccCCCCCCCccccccccCCC-Ccc---hHHH-------Hhc----c-ccCCccccccccCCCC
Confidence 999986554321 1 10 00111 110010000000 110 0000 000 0 00100 00 0000000
Q ss_pred CCCeEEEEEeechHHHHHHHHHc----cCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCcchhh
Q 012980 208 LWPRKLATATFSIDDMKAVKKAI----AGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLS 283 (452)
Q Consensus 208 ~~~r~~~~~~~~~~~lk~~a~~~----~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~~~~~~~~ 283 (452)
...+.+....-.++++|+.+... +.+|-+|++.|.+-.++.+-........-++ ....+.++||+|+..++.
T Consensus 238 ~~~~~f~f~~~~i~~Lk~~a~~~~~~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~-~~~~l~~~vd~R~rl~pp--- 313 (453)
T 2xr7_A 238 KVRGTFIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEEIDEN-GMEFFGCAADCRAQFNPP--- 313 (453)
T ss_dssp CCCEEEEECHHHHHHHHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTT-SEEEEEEECCTTSCSSSC---
T ss_pred ceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHhccccccCCCC-cceEEEEEecccccCCCC---
Confidence 01445666666677777766552 1489999999998777766544310000022 478999999999876421
Q ss_pred hhhccCCCCCCCceEEEEEEEccCCCC
Q 012980 284 NLMKSNSGTRWGNKFGMLLLPIYYHKG 310 (452)
Q Consensus 284 ~~~~~~~~~~~gN~~~~~~~~l~~p~~ 310 (452)
=+....||.+....... +.+
T Consensus 314 -----lP~~Y~GN~~~~~~~~~--~~~ 333 (453)
T 2xr7_A 314 -----LPPSYFGNALVGYVART--RQV 333 (453)
T ss_dssp -----CCTTBCSCCCCEEEEEE--EHH
T ss_pred -----CCcccccceeeeeeeee--eHH
Confidence 03468999988887766 553
No 11
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=97.98 E-value=0.00044 Score=69.53 Aligned_cols=264 Identities=14% Similarity=0.018 Sum_probs=134.4
Q ss_pred CCccCChhhhcccCCCcceEEEEEEecCCC----C--ChhHHHHHHHhhhcccCCCCceeee-eC-CCCceeeeec----
Q 012980 5 PDEPLTPAGRLFLQPHMNTIIHCVVGFERP----I--DVPKSKDAVMSSIMVRHPRFRSVLV-RD-KRGLEHWRET---- 72 (452)
Q Consensus 5 ~~~~L~~~d~~~~~~~~~~~~~~~~~~~~~----l--d~~~l~~al~~~~~~~~p~lr~~~~-~~-~~g~p~w~~~---- 72 (452)
...+||+.|..+... .++..+.+|..... . ..+.|+++|.+.+. .||-|.-|++ .. ..|+++....
T Consensus 25 ~~~~LS~lD~~~~~~-~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~-~~~plAGRl~~~~~~~g~~~i~c~~~~g 102 (454)
T 2e1v_A 25 KSLQLTFFDFFWLRS-PPINNLFFYELPITRSQFTETVVPNIKHSLSITLK-HFYPFVGKLVVYPAPTKKPEICYVEGDS 102 (454)
T ss_dssp EEEECCHHHHTTTTC-CCEEEEEEEECCCCHHHHHHTHHHHHHHHHHHHHT-TCGGGGSEEEECSSSSSCCEEEECTTCC
T ss_pred ceecCchHHhhhhcc-CCccEEEEEeCCCCcchhhHHHHHHHHHHHHHHhh-hccccceeeeeccCCCCCEEEEECCCCc
Confidence 345788888875321 23444445554322 1 15789999999999 9999999997 42 2344433221
Q ss_pred --------ccCccccceee-CChhHHHHHHHhhhcCCCCCC--------CCCCeE--EEEEc-cceEEEEeecccccccc
Q 012980 73 --------SVDIDRHFVEV-HDSTSVNDYVAGLSFSSPLSE--------DKPLWE--VHVLA-EHRCAVFRIHHALGDGI 132 (452)
Q Consensus 73 --------~~d~~~hv~~l-~~~~~l~~~~~~~~~~~pld~--------~~PlW~--~~lv~-~~~~l~~~~HH~l~DG~ 132 (452)
+.++++..... .....+ ..+... .+. +.|+.. +..+. |+.+|.+.+||+++||.
T Consensus 103 v~fv~A~~~~~l~~l~~~~~~~~~~~----~~l~p~--~~~~~~~~~~~~~pll~vQvT~f~cgG~~lg~~~~H~v~Dg~ 176 (454)
T 2e1v_A 103 VAVTFAECNLDLNELTGNHPRNCDKF----YDLVPI--LGESTRLSDCIKIPLFSVQVTLFPNQGIAIGITNHHCLGDAS 176 (454)
T ss_dssp EEEEEEEECSCGGGTSSSSCEEGGGG----GGGSCC--CCCCEECSSCEEEECEEEEEEEETTTEEEEEEEECGGGCCHH
T ss_pred EEEEEEEeCCCHHHhcCCCCCcchhh----hcCCCC--CCCcccccccccCceEEEEEEEecCCcEEEEEEeeeeecchh
Confidence 11111110000 000111 122211 111 126654 44455 89999999999999999
Q ss_pred cHHHHHHHhcccCC-CCC-C---CCCCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHhcc---cCCCCCcccCCC
Q 012980 133 SLVSMLLAGCRLAD-DPE-A---LPAVAGGKRTESAGKIGSLWGLLKMVLLSIVFVLEFLLRALW---VSDRKTAISGGA 204 (452)
Q Consensus 133 s~~~l~~~l~~~~~-~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 204 (452)
|+.+++........ ... . .+..++...+ ... ... .-...+ ........ ...+..+ .+
T Consensus 177 ~~~~Fl~awa~~~r~g~~~~~~~~~~~~P~~dr-~l~---~p~-~~~~~~-------~~~~~~~~~~~~~~~~~~--~~- 241 (454)
T 2e1v_A 177 TRFCFLKAWTSIARSGNNDESFLANGTRPLYDR-IIK---YPM-LDEAYL-------KRAKVESFNEDYVTQSLA--GP- 241 (454)
T ss_dssp HHHHHHHHHHHHHHTTSCCHHHHHHSCCCBCCC-CCC---CHH-HHHHHH-------HHTTCTTHHHHCCCCCCC--CC-
T ss_pred HHHHHHHHHHHHhccCCCccccCCCCCCCcccc-cCC---CCC-cchHHH-------HhhhccccccccCcccCC--CC-
Confidence 99999986554321 110 0 0011000011 100 111 000000 00000000 0001111 11
Q ss_pred CCCCCCeEEEEEeechHHHHHHHHHc----cCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCcc
Q 012980 205 GVELWPRKLATATFSIDDMKAVKKAI----AGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQ 280 (452)
Q Consensus 205 ~~~~~~r~~~~~~~~~~~lk~~a~~~----~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~~~~~ 280 (452)
.. ...+.+....-.++++|+.+... +.+|-+|++.|.+-.++.+-. . .....+.++||+|+..++.
T Consensus 242 ~~-~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~St~d~l~A~lWr~~~~Ar---~------~~~~~l~~~vd~R~rl~pp 311 (454)
T 2e1v_A 242 SD-KLRATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSR---N------DKLQLFGFPIDRRARMKPP 311 (454)
T ss_dssp CC-EEEEEEEECHHHHHHHHHHHHHHCTTCSCCCHHHHHHHHHHHHHHHHH---C------CSEEEEEEEEECGGGSSSC
T ss_pred CC-ceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhc---C------CCceEEEEEecchhccCCC
Confidence 10 00223444444466666655542 148999999998877665543 2 1478899999999876421
Q ss_pred hhhhhhccCCCCCCCceEEEEEEEccCCCCC
Q 012980 281 DLSNLMKSNSGTRWGNKFGMLLLPIYYHKGG 311 (452)
Q Consensus 281 ~~~~~~~~~~~~~~gN~~~~~~~~l~~p~~~ 311 (452)
-+....||.+....... +.++
T Consensus 312 --------lP~~Y~GN~~~~~~~~~--~~~e 332 (454)
T 2e1v_A 312 --------IPTAYFGNCVGGCAAIA--KTNL 332 (454)
T ss_dssp --------CCTTBCSCCEEEEEEEE--EGGG
T ss_pred --------CCcccccceeeeEEeec--chhh
Confidence 03468999998887777 5543
No 12
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=97.64 E-value=0.0017 Score=65.02 Aligned_cols=269 Identities=12% Similarity=0.012 Sum_probs=128.5
Q ss_pred ccCChhhhcccCCCcceEEEEEEecCCCC----ChhHHHHHHHhhhcccCCCCceeeeeCC-----CCceeeeecccCcc
Q 012980 7 EPLTPAGRLFLQPHMNTIIHCVVGFERPI----DVPKSKDAVMSSIMVRHPRFRSVLVRDK-----RGLEHWRETSVDID 77 (452)
Q Consensus 7 ~~L~~~d~~~~~~~~~~~~~~~~~~~~~l----d~~~l~~al~~~~~~~~p~lr~~~~~~~-----~g~p~w~~~~~d~~ 77 (452)
.+|+.+|+...-...++..+.+|....+. -.+.|+++|.+.+. .|+-|.-|++... .|.++-...+ ...
T Consensus 5 ~~Ls~lD~~~~~~~~y~~~~~~y~~~~~~~~~~~~~~Lk~sLs~~L~-~~~plAGRl~~~~~~~~~~g~~~i~~~~-~~~ 82 (451)
T 2rkv_A 5 IQLDTLGQLPGLLSIYTQISLLYPVSDSSQYPTIVSTFEQGLKRFSE-AVPWVAGQVKAEGISEGNTGTSFIVPFE-DVP 82 (451)
T ss_dssp EECCGGGGCTTGGGCEEEEEEEEECSCGGGHHHHHHHHHHHHHHHHH-HSGGGGCEEEEESCBTTBCCEEEEECCC-SSC
T ss_pred ccCChhhcCccccccceeEEEEEECCCCCCHHHHHHHHHHHHHHHHH-hCCceeEEEEECCCCCCCCCcEEEeecC-CCC
Confidence 48899988741112334344444432211 15789999999999 9988998987632 2333322111 110
Q ss_pred -ccceeeCC---hhHHHHHHH-----------hhhcCCC-CC--------CCCCCeEEEEE--ccceEEEEeeccccccc
Q 012980 78 -RHFVEVHD---STSVNDYVA-----------GLSFSSP-LS--------EDKPLWEVHVL--AEHRCAVFRIHHALGDG 131 (452)
Q Consensus 78 -~hv~~l~~---~~~l~~~~~-----------~~~~~~p-ld--------~~~PlW~~~lv--~~~~~l~~~~HH~l~DG 131 (452)
-.+..... ...++++.. .+... . ++ .+.|+..+.+- .|+.+|.+.+||+++||
T Consensus 83 ~~~va~~~~d~~~p~~~~l~~~~~p~~~~~~~~~~p~-~~~p~~~~~~~~~~~pll~vQvT~~~GG~~lg~~~~H~v~Dg 161 (451)
T 2rkv_A 83 RVVVKDLRDDPSAPTIEGMRKAGYPMAMFDENIIAPR-KTLPIGPGTGPDDPKPVILLQLNFIKGGLILTVNGQHGAMDM 161 (451)
T ss_dssp EEEEEECTTCTTSCBHHHHHHHTSCGGGSBHHHHCSS-CSSSCSTTCSTTSCCBSEEEEEEEEBTEEEEEEEEETTTCCH
T ss_pred eEEEEeCCCCCCCCCHHHHHHcCCChhhcCHhhcCCc-ccCCCCcccCCCCCCceEEEEEEEecCceeeeeeehhccccH
Confidence 00001110 002222211 11111 1 11 13576544433 38999999999999999
Q ss_pred ccHHHHHHHhcccC-CCCCCCCC--CCCCCCCCCCCcc-chHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccCCCCCC
Q 012980 132 ISLVSMLLAGCRLA-DDPEALPA--VAGGKRTESAGKI-GSLWGLLKMVLLSIVFVLEFLLRALWVSDRKTAISGGAGVE 207 (452)
Q Consensus 132 ~s~~~l~~~l~~~~-~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (452)
.|+.+++....... +.+..... .|.-.+....+.. ...+.. . +........+...........
T Consensus 162 ~g~~~Fl~awa~~~rg~~~~~~~~~~p~~dr~~~~p~~~~~~p~~---------~----~~~~~~~~~~~~~~~~~~~~~ 228 (451)
T 2rkv_A 162 VGQDAVIRLLSKACRNDPFTEEEMTAMNLDRKTIVPYLENYTIGP---------E----VDHQIVKADVAGGDAVLTPVS 228 (451)
T ss_dssp HHHHHHHHHHHHHHHTCCCCHHHHHHTTCCSTTSSCCCTTCCCCG---------G----GTTCBCCTTSCC-------CC
T ss_pred HHHHHHHHHHHHHhcCCCCCccccccccCchhhccccccccCCCc---------c----ccccccCCCCCCCCCCCCCCC
Confidence 99999998655432 11110000 0000000000000 000000 0 000000000000000000000
Q ss_pred CCCeEEEEEeechHHHHHHHHHc-----cCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCcchh
Q 012980 208 LWPRKLATATFSIDDMKAVKKAI-----AGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDL 282 (452)
Q Consensus 208 ~~~r~~~~~~~~~~~lk~~a~~~-----~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~~~~~~~ 282 (452)
...+.+....-.++++|+.+... +.+|-+|++.|.+-.++.+-..... .......+.++||+|+....
T Consensus 229 ~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~----~~~~~~~l~~~vd~R~rl~l--- 301 (451)
T 2rkv_A 229 ASWAFFTFSPKAMSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLERI----DGSAPTEFCRAVDARPAMGV--- 301 (451)
T ss_dssp EEEEEEEECHHHHHHHHHHHHTTCCTTCSCCCHHHHHHHHHHHHHHHHHTTTS----CTTSEEEEEEEEECHHHHTC---
T ss_pred ceEEEEEECHHHHHHHHHHHhhhccCCCCCccHHHHHHHHHHHHHHHHHhccC----CCCCceEEEEEecccccCCC---
Confidence 00222333333355555555432 1389999999998777665431111 12257899999999986543
Q ss_pred hhhhccCCCCCCCceEEEEEEEc
Q 012980 283 SNLMKSNSGTRWGNKFGMLLLPI 305 (452)
Q Consensus 283 ~~~~~~~~~~~~gN~~~~~~~~l 305 (452)
+....||.+.......
T Consensus 302 -------P~~y~GN~~~~~~~~~ 317 (451)
T 2rkv_A 302 -------SNNYPGLLQNMTYHNS 317 (451)
T ss_dssp -------CTTCCSCCEEEEEEEE
T ss_pred -------CCCCcccceeeecccC
Confidence 3468999998877766
No 13
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=94.58 E-value=0.89 Score=40.49 Aligned_cols=60 Identities=13% Similarity=0.039 Sum_probs=41.5
Q ss_pred EEEEeechHHHHHHHHH-----ccCCchhHHHHHHHHHHHHHHHhhhCC---C--CCCCCcceEEEEEeee
Q 012980 213 LATATFSIDDMKAVKKA-----IAGATINDVLFGVVSSGLSRYLDHRSP---N--ALPEGLRITGLAMVNI 273 (452)
Q Consensus 213 ~~~~~~~~~~lk~~a~~-----~~g~TvndvllAa~a~al~~~~~~~~~---~--~~~~~~~l~~~vPv~l 273 (452)
....++++..+.+.+++ . +.|++++++-|++.||.++-.-+.. . .+-.-+.+.+++.|+.
T Consensus 33 ~~~~evDvt~l~~~r~~~k~~g~-kls~~~~~ikA~~~Al~~~P~~N~~~~~~~~~i~~~~~v~igiAV~~ 102 (224)
T 3rqc_A 33 TVMEEVDVTSMVSILDSAKARNR-KVTVTGFLARIVPSILKQYPYLNAIYDETRRVYILKKYYNIGIAVDT 102 (224)
T ss_dssp EEEECCBTHHHHHHHHHHTTTTC-CCCHHHHHHHHHHHHHHHSGGGSBBCCSSTTCCCEECSCCEEEEEEC
T ss_pred EEEEEEEHHHHHHHHHHHhhcCC-CCCHHHHHHHHHHHHHHhCHHhheEEeCCCCEEEEeCccceEeEEEc
Confidence 45778888888887766 4 6799999999999999987543320 0 1111135677777764
No 14
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=94.07 E-value=1.9 Score=38.15 Aligned_cols=60 Identities=10% Similarity=-0.011 Sum_probs=42.6
Q ss_pred EEEEeechHHHHHHHHHccCCchhHHHHHHHHHHHHHHHhhhC---CCCCCCCcceEEEEEe-ee
Q 012980 213 LATATFSIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRS---PNALPEGLRITGLAMV-NI 273 (452)
Q Consensus 213 ~~~~~~~~~~lk~~a~~~~g~TvndvllAa~a~al~~~~~~~~---~~~~~~~~~l~~~vPv-~l 273 (452)
..+.++++..+.+.+++. +.|+|++++=|++.||+++-.-+. +..+..-+.+.+++.| +.
T Consensus 34 t~~~evDvt~l~~~rk~~-~ls~~~~~ikAv~~Al~~~P~~Na~~~~~~i~~~~~v~igiAV~~t 97 (219)
T 1q23_A 34 NQTVQLDITAFLKTVKKN-KHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHE 97 (219)
T ss_dssp EEEEEEECHHHHHHHHHT-TCCHHHHHHHHHHHHHTTCGGGSEEEETTEEEEESCCEEEEEEEET
T ss_pred EEEEEEEhHHHHHHHHHc-CCCHHHHHHHHHHHHHHhChHhhEEEECCEEEEecccCeEEEEEec
Confidence 358899999999999999 999999999999999987643221 0011111345677777 54
No 15
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=93.70 E-value=3 Score=36.84 Aligned_cols=60 Identities=13% Similarity=-0.021 Sum_probs=43.9
Q ss_pred EEEEeechHHHHHHHHHccCCchhHHHHHHHHHHHHHHHhhhC----CCCCCCCcceEEEEEe-ee
Q 012980 213 LATATFSIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRS----PNALPEGLRITGLAMV-NI 273 (452)
Q Consensus 213 ~~~~~~~~~~lk~~a~~~~g~TvndvllAa~a~al~~~~~~~~----~~~~~~~~~l~~~vPv-~l 273 (452)
..+.++++..+.+.+++. +.|+|+.++=|++.||.++-.-+. +..+..-+.+.++++| +.
T Consensus 31 ~~~~evDvt~l~~~rk~~-~ls~~~~~ikAv~~Al~~~P~~n~~~~~~~~i~~~~~i~igvAVf~t 95 (217)
T 2i9d_A 31 SITSEVECGGARQRAKAA-GQSFFLHYLYAVLRAANEIPEFRYRIDPDGRVVLYDTIDMLSPIKIK 95 (217)
T ss_dssp EEEEEEECHHHHHHHHHT-TCCHHHHHHHHHHHHHHHSGGGGEEECTTSCEEEESCCEEEEEEECS
T ss_pred EEEEEEEhHHHHHHHHHc-CCCHHHHHHHHHHHHHHhCHHhheEEcCCCEEEEecccCeEEEEEec
Confidence 458889999999999999 999999999999999998743321 0011111356778887 65
No 16
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=93.53 E-value=2 Score=38.48 Aligned_cols=37 Identities=16% Similarity=0.238 Sum_probs=27.5
Q ss_pred EEEeechHHHHHHHHH----------ccCCchhHHHHHHHHHHHHHHH
Q 012980 214 ATATFSIDDMKAVKKA----------IAGATINDVLFGVVSSGLSRYL 251 (452)
Q Consensus 214 ~~~~~~~~~lk~~a~~----------~~g~TvndvllAa~a~al~~~~ 251 (452)
.+.++++..+.+..++ . +.|+|++++-|++.||.++-
T Consensus 32 ~~~evdvt~l~~~r~~~k~~~~~~~g~-kls~~~~~ikA~~~Al~~~P 78 (233)
T 1scz_A 32 TFNEVNMKPIMDLRKQYGEAFEKRHGI-RLGFMSFYVKAVVEALKRYP 78 (233)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSS-CCCSHHHHHHHHHHHHHHCT
T ss_pred EEEEEEcHHHHHHHHHHHhhhhhhcCC-cccHHHHHHHHHHHHHHhCh
Confidence 4666776665554222 5 89999999999999998864
No 17
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=92.88 E-value=1.5 Score=39.65 Aligned_cols=40 Identities=8% Similarity=0.052 Sum_probs=31.0
Q ss_pred EEEEeechHHHHHHHHHcc----CCchhHHHHHHHHHHHHHHHh
Q 012980 213 LATATFSIDDMKAVKKAIA----GATINDVLFGVVSSGLSRYLD 252 (452)
Q Consensus 213 ~~~~~~~~~~lk~~a~~~~----g~TvndvllAa~a~al~~~~~ 252 (452)
..+.++++..+.+.+++.. +.|++++++-|++.||.++-.
T Consensus 41 ~~~~evDvt~l~~~r~~~k~~~~kls~~~~iikAva~AL~~~P~ 84 (250)
T 3l60_A 41 KASVEVICAELLRLRDRFVSAAPEITPFALTLRLLVIALKHNVI 84 (250)
T ss_dssp EEEEEEECHHHHHHHHHHTTTCTTCCHHHHHHHHHHHHHHHCGG
T ss_pred EEEEEEEHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCHH
Confidence 4577888888777766421 679999999999999998753
No 18
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=92.75 E-value=1.9 Score=37.93 Aligned_cols=60 Identities=12% Similarity=0.091 Sum_probs=42.9
Q ss_pred EEEEeechHHHHHHHHHccCCchhHHHHHHHHHHHHHHHhhhC---CCCCCCCcceEEEEEe-ee
Q 012980 213 LATATFSIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRS---PNALPEGLRITGLAMV-NI 273 (452)
Q Consensus 213 ~~~~~~~~~~lk~~a~~~~g~TvndvllAa~a~al~~~~~~~~---~~~~~~~~~l~~~vPv-~l 273 (452)
..+.++++..+.+.+++. +.|+|++++=|++.||.++-.-+. +..+..-+.+.+++.| +.
T Consensus 29 ~~~~evDvt~l~~~rk~~-~ls~~~~~ikAv~~Al~~~P~~Na~~~~~~i~~~~~v~igiAVf~t 92 (213)
T 3cla_A 29 SLTSKIDITTLKKSLDDS-AYKFYPVMIYLIAQAVNQFDELRMAIKDDELIVWDSVDPQFTVFHQ 92 (213)
T ss_dssp EEEEEEECHHHHHHHHTS-SCCHHHHHHHHHHHHHTTCGGGSEEEETTEEEEESCCEEEEEEEET
T ss_pred EEEEEEEHHHHHHHHHHh-CCCHHHHHHHHHHHHHhhCHHhhEEEECCEEEEEeccceeEEEEeC
Confidence 458889999999999999 999999999999999987643221 0011111356777777 65
No 19
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=92.54 E-value=2 Score=39.02 Aligned_cols=37 Identities=8% Similarity=0.124 Sum_probs=27.0
Q ss_pred EEEeechHHHHHHHH----------HccCCchhHHHHHHHHHHHHHHH
Q 012980 214 ATATFSIDDMKAVKK----------AIAGATINDVLFGVVSSGLSRYL 251 (452)
Q Consensus 214 ~~~~~~~~~lk~~a~----------~~~g~TvndvllAa~a~al~~~~ 251 (452)
...++++..+.+.++ .. +.|++++++-|++.||.++-
T Consensus 46 ~~~evDvt~l~~~r~~~k~~~~~~~g~-kls~~~~iikAva~AL~~~P 92 (256)
T 3mae_A 46 MMVEVDATGLVRYRNAVKDSFKKEEGY-SLTYFAFFIKAVAQALKEFP 92 (256)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSS-CCCHHHHHHHHHHHHHHHCT
T ss_pred EEEEEEHHHHHHHHHHHHhhhhhhcCC-CccHHHHHHHHHHHHHHhCH
Confidence 456666655544422 24 69999999999999999874
No 20
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=92.22 E-value=2.6 Score=38.37 Aligned_cols=38 Identities=11% Similarity=0.204 Sum_probs=28.3
Q ss_pred EEEeechHHHHHHHHH---------ccCCchhHHHHHHHHHHHHHHHh
Q 012980 214 ATATFSIDDMKAVKKA---------IAGATINDVLFGVVSSGLSRYLD 252 (452)
Q Consensus 214 ~~~~~~~~~lk~~a~~---------~~g~TvndvllAa~a~al~~~~~ 252 (452)
.+.++++..+.+..++ . +.|++++++-|++.||.++-.
T Consensus 58 ~~~evDvt~l~~~r~~~k~~~~~~g~-kls~~~~~ikAva~Al~~~P~ 104 (262)
T 2ii3_A 58 YCDEVDLTELVKLREELKPIAFARGI-KLSFMPFFLKAASLGLLQFPI 104 (262)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHTTC-CCCSHHHHHHHHHHHHHHCGG
T ss_pred EEEEEEhHHHHHHHHHHhhhhhhccC-CccHHHHHHHHHHHHHHhChH
Confidence 4667776665554322 5 899999999999999998743
No 21
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=92.18 E-value=4.2 Score=36.52 Aligned_cols=39 Identities=21% Similarity=0.247 Sum_probs=28.5
Q ss_pred EEEEeechHHHHHHH---HH------ccCCchhHHHHHHHHHHHHHHHh
Q 012980 213 LATATFSIDDMKAVK---KA------IAGATINDVLFGVVSSGLSRYLD 252 (452)
Q Consensus 213 ~~~~~~~~~~lk~~a---~~------~~g~TvndvllAa~a~al~~~~~ 252 (452)
..+.++++..+.+.. +. . +.|++++++-|++.||+++-.
T Consensus 42 ~~~~evDvt~l~~~r~~~k~~~~~~g~-kls~~~~~ikA~~~Al~~~P~ 89 (243)
T 1dpb_A 42 TQFESADITELEAFRVAQKAVAEKAGV-KLTVLPLLLKACAYLLKELPD 89 (243)
T ss_dssp EEEEEEECHHHHHHHHHTHHHHHHTTC-CCCSHHHHHHHHHHHHHHSGG
T ss_pred EEEEEEEhHHHHHHHHHHhhhhhhccC-CCChHHHHHHHHHHHHHhChH
Confidence 346667766655542 22 5 899999999999999998743
No 22
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=91.72 E-value=2.5 Score=38.00 Aligned_cols=58 Identities=10% Similarity=0.153 Sum_probs=35.8
Q ss_pred EEeechHHHHHHHHH--------ccCCchhHHHHHHHHHHHHHHHhhhC---CCCCCCCcceEEEEEeee
Q 012980 215 TATFSIDDMKAVKKA--------IAGATINDVLFGVVSSGLSRYLDHRS---PNALPEGLRITGLAMVNI 273 (452)
Q Consensus 215 ~~~~~~~~lk~~a~~--------~~g~TvndvllAa~a~al~~~~~~~~---~~~~~~~~~l~~~vPv~l 273 (452)
+.++++..+.+..++ . +.|+|++++-|++.||+++-.-+. +..+-.-+.+.+++.|+.
T Consensus 41 ~~evDvt~l~~~r~~~k~~~~~~~-kls~~~~~ikAv~~Al~~~P~~Na~~~~~~i~~~~~v~igvAV~~ 109 (239)
T 3b8k_A 41 SIDVNMGEVLLVRKELNKILEGRS-KISVNDFIIKASALACLKVPEANSSWMDTVIRQNHVVDVSVAVST 109 (239)
T ss_dssp EEEECCTTHHHHHHHTHHHHTTSS-CCCHHHHHHHHHHHHHHHCCCSCTTSCCCSSSCSCCCCEEECEEC
T ss_pred EEEEEcHHHHHHHHHHHhhhhccC-CCCHHHHHHHHHHHHHHhChHhhEEEECCEEEEeCceeEEEEEEc
Confidence 455565555544332 6 899999999999999987643221 011212235677777764
No 23
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=61.48 E-value=1.7 Score=42.73 Aligned_cols=175 Identities=11% Similarity=0.094 Sum_probs=0.0
Q ss_pred EEeechHHHHHHHHHccC---------CchhHHHHHHHHHHHHHHHhhhC---C--CCCCCCcceEEEEEeeeccCCCcc
Q 012980 215 TATFSIDDMKAVKKAIAG---------ATINDVLFGVVSSGLSRYLDHRS---P--NALPEGLRITGLAMVNIRRQPGLQ 280 (452)
Q Consensus 215 ~~~~~~~~lk~~a~~~~g---------~TvndvllAa~a~al~~~~~~~~---~--~~~~~~~~l~~~vPv~lR~~~~~~ 280 (452)
+.++++..+.+.++++ + .|+|++++-|++.||++|-.-+. + ..+-....+.+++.|+...+
T Consensus 227 ~~evDvt~l~~~rk~~-~~~~~~~g~kls~~~~~ikAva~Al~~~P~~Na~~~~~~~~i~~~~~v~igiAV~t~~G---- 301 (428)
T 3dva_I 227 MDEADVTKLVAHRKKF-KAIAAEKGIKLTFLPYVVKALVSALREYPVLNTSIDDETEEIIQKHYYNIGIAADTDRG---- 301 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEeHHHHHHHHHHh-hhhHhhcCCCcCHHHHHHHHHHHHHHhCHHhhheEecCCCeEEEcCccCeEEEEEcCCc----
Q ss_pred hhhhhhccCCCCCCCceEEEEEEEccCCCCCCCHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHhHHHHHHHhccc
Q 012980 281 DLSNLMKSNSGTRWGNKFGMLLLPIYYHKGGADPLSYVKRAKKMIDSKKLTLEGHFSYKIGNLVMSWFGAKVACLLNYRI 360 (452)
Q Consensus 281 ~~~~~~~~~~~~~~gN~~~~~~~~l~~p~~~~d~~~~l~~v~~~~~~~k~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 360 (452)
..++.-.-.+..+..+..+++++...+.|+ ..+...-
T Consensus 302 --------------------L~vPvi~~a~~~sl~eia~~~~~l~~~ar~-----------------------gkL~~~e 338 (428)
T 3dva_I 302 --------------------LLVPVIKHADRKPIFALAQEINELAEKARD-----------------------GKLTPGE 338 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------eEEeeeccCCCCCHHHHHHHHHHHHHHHHc-----------------------CCCCccc
Q ss_pred ccceeEEEeccCCCCcceeecCCeeeEEeeccCCCCceeEEEEEee-----CC------eEEEEEEecCCCCC--CHHHH
Q 012980 361 VCNTTFTISNIVGPTEKITLADNPVAYLRANTSSLPHALTMHMMSY-----AG------RADMQILVAKDIIP--DPELL 427 (452)
Q Consensus 361 ~~~~~~~vSNv~g~~~~l~~~g~~v~~~~~~~~~~~~~l~v~v~s~-----~g------~l~l~i~~d~~~~~--~~~~l 427 (452)
+...++.+||+|. +++....-++..+... -|+++-+.. +| .+.+++++|..++. +..++
T Consensus 339 ~~ggtftISnlG~------~G~~~ftpIin~pq~a--Il~vG~i~~~pv~~~g~i~~r~~m~lsls~DHRviDG~~aa~F 410 (428)
T 3dva_I 339 MKGASCTITNIGS------AGGQWFTPVINHPEVA--ILGIGRIAEKPIVRDGEIVAAPMLALSLSFDHRMIDGATAQKA 410 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCEEEEEcCCC------CCccceEeecCCCCce--EEEccccEEEEEEECCEEEEeeeEEEEEEecccccchHHHHHH
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 012980 428 AKCFEDSLLEMKEAALTS 445 (452)
Q Consensus 428 ~~~~~~~l~el~~~~~~~ 445 (452)
+..|++.|..-..+..+.
T Consensus 411 l~~lk~~Le~P~~lll~~ 428 (428)
T 3dva_I 411 LNHIKRLLSDPELLLMEA 428 (428)
T ss_dssp ------------------
T ss_pred HHHHHHHHhCHHHHhhcC
No 24
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=61.22 E-value=74 Score=35.13 Aligned_cols=40 Identities=5% Similarity=0.001 Sum_probs=28.0
Q ss_pred EEEEeechHHHHHH---HHH-------ccCCchhHHHHHHHHHHHHHHHhh
Q 012980 213 LATATFSIDDMKAV---KKA-------IAGATINDVLFGVVSSGLSRYLDH 253 (452)
Q Consensus 213 ~~~~~~~~~~lk~~---a~~-------~~g~TvndvllAa~a~al~~~~~~ 253 (452)
..+.++++..+.+. .+. . +.|++++++-|++.||.++-.-
T Consensus 12 t~~~evDvt~l~~~R~~~k~~~~~~~g~-kls~~~~iikAva~AL~~~P~~ 61 (1113)
T 2xt6_A 12 TSVRAIPAKLMIDNRVVINNHLKRTRGG-KISFTHLLGYAIVQAVKKFPNM 61 (1113)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHTTCC-CCCHHHHHHHHHHHHHHHCGGG
T ss_pred EEEEEEehHHHHHHHHHHHhhhhhhcCC-CccHHHHHHHHHHHHHHhChHh
Confidence 34666776554432 222 5 8999999999999999987543
No 25
>3qoq_A Alginate and motility regulator Z; protein-DNA complex, ribbon-helix-helix; HET: DNA; 3.10A {Pseudomonas aeruginosa}
Probab=55.64 E-value=17 Score=25.52 Aligned_cols=33 Identities=9% Similarity=0.117 Sum_probs=26.9
Q ss_pred EEeechHHHHHHHHHccCCchhHHHHHHHHHHHH
Q 012980 215 TATFSIDDMKAVKKAIAGATINDVLFGVVSSGLS 248 (452)
Q Consensus 215 ~~~~~~~~lk~~a~~~~g~TvndvllAa~a~al~ 248 (452)
...--.++|+..|+.. |.|+|..+..++..++.
T Consensus 26 lP~eL~~~L~~~A~~~-grSlNaeIv~~Le~sl~ 58 (69)
T 3qoq_A 26 LPEGMREQIAEVARSH-HRSMNSEIIARLEQSLL 58 (69)
T ss_dssp CCTTHHHHHHHHHHHT-TCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHHH
Confidence 4444468899999999 99999999988777665
No 26
>1baz_A ARC repressor; transcription regulation; 1.90A {Enterobacteria phage P22} SCOP: a.43.1.1 PDB: 1bdv_A* 1arq_A 1arr_A 1bdt_A* 1par_A* 1myk_A 1qtg_A 1b28_A 1myl_A
Probab=55.56 E-value=18 Score=23.79 Aligned_cols=28 Identities=18% Similarity=0.375 Sum_probs=23.2
Q ss_pred hHHHHHHHHHccCCchhHHHHHHHHHHHH
Q 012980 220 IDDMKAVKKAIAGATINDVLFGVVSSGLS 248 (452)
Q Consensus 220 ~~~lk~~a~~~~g~TvndvllAa~a~al~ 248 (452)
.+.++..|+.. |.|+|..+..++..++.
T Consensus 19 ~~~l~~~A~~~-grS~N~~i~~~L~~~l~ 46 (53)
T 1baz_A 19 LDLVRKVAEEN-GRSVNSEIYQRVMESFK 46 (53)
T ss_dssp HHHHHHHHHHT-TCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCCHHHHHHHHHHHHHh
Confidence 57888999999 99999998888766544
No 27
>2deb_A CPT II, carnitine O-palmitoyltransferase II, mitochondrial; central six-stranded beta-sheet; HET: BOG COA PLM; 1.60A {Rattus norvegicus} PDB: 2fw3_A* 2fyo_A 2rcu_A* 2h4t_A*
Probab=54.55 E-value=67 Score=33.18 Aligned_cols=68 Identities=10% Similarity=0.163 Sum_probs=47.4
Q ss_pred eEEEeccCCCCcceeecCCeeeEEeeccCCCCceeEEEEEeeCCeEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHhh
Q 012980 365 TFTISNIVGPTEKITLADNPVAYLRANTSSLPHALTMHMMSYAGRADMQILVAKDIIPDPELLAKCFEDSLLEMKEAALT 444 (452)
Q Consensus 365 ~~~vSNv~g~~~~l~~~g~~v~~~~~~~~~~~~~l~v~v~s~~g~l~l~i~~d~~~~~~~~~l~~~~~~~l~el~~~~~~ 444 (452)
-++.||+|++. + ...++++..+.+.+|+=.--++.+.++|++-. -.+.+++.+.++++|.++.+....
T Consensus 581 ~LSTS~~~~~~--~--------~~~gfgPv~~dGyGi~Y~i~~~~i~f~iSs~~--~t~~~~F~~~L~~al~dm~~ll~~ 648 (653)
T 2deb_A 581 ILSTSTLNSPA--V--------SLGGFAPVVPDGFGIAYAVHDDWIGCNVSSYS--GRNAREFLHCVQKCLEDIFDALEG 648 (653)
T ss_dssp SEEEEECCCTT--E--------EEEECCCSSTTCEEEEEEECSSCEEEEEEECT--TSCHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEeecCCCCCc--c--------ccceeeccCCCceEEEEEecCCeEEEEEEeCC--CCCHHHHHHHHHHHHHHHHHHHhc
Confidence 46778887642 1 22334443344555555556799999999864 348999999999999999887764
No 28
>1nla_A Transcriptional repressor ARC; 3(10) helix, beta-ribbon, beta-sheet, structural switching; NMR {Enterobacteria phage P22} SCOP: a.43.1.1
Probab=51.04 E-value=22 Score=24.43 Aligned_cols=30 Identities=17% Similarity=0.350 Sum_probs=25.3
Q ss_pred hHHHHHHHHHccCCchhHHHHHHHHHHHHHH
Q 012980 220 IDDMKAVKKAIAGATINDVLFGVVSSGLSRY 250 (452)
Q Consensus 220 ~~~lk~~a~~~~g~TvndvllAa~a~al~~~ 250 (452)
.+.++.+|+.. |.|+|..+..++..++...
T Consensus 19 h~~l~~~A~~~-GrSlN~~Iv~~L~~~l~~~ 48 (64)
T 1nla_A 19 LDLVRKVAEEN-GRSVNSEIYQRVMESFKKE 48 (64)
T ss_dssp HHHHHHHHHHH-TSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-CCCHHHHHHHHHHHHHhcc
Confidence 46788899999 9999999999988776654
No 29
>1p94_A Plasmid partition protein PArg; ribbon-helix-helix, dimer, DNA binding, cell cycle; NMR {Salmonella enterica} SCOP: a.43.1.3
Probab=45.56 E-value=30 Score=24.73 Aligned_cols=32 Identities=22% Similarity=0.146 Sum_probs=24.8
Q ss_pred EEEeechHHHHHHHHHccCCchhHHHHHHHHHH
Q 012980 214 ATATFSIDDMKAVKKAIAGATINDVLFGVVSSG 246 (452)
Q Consensus 214 ~~~~~~~~~lk~~a~~~~g~TvndvllAa~a~a 246 (452)
.....-..++|.+|... |.|++|++--++..+
T Consensus 40 ~i~~~lh~rlK~~Aa~~-g~Smsdvvreli~~~ 71 (76)
T 1p94_A 40 NFDEEKHTRFKAACARK-GTSITDVVNQLVDNW 71 (76)
T ss_dssp EEEHHHHHHHHHHHHHH-TCCHHHHHHHHHHHH
T ss_pred EcCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHH
Confidence 34444467899999999 999999988776443
No 30
>1t1u_A Choline O-acetyltransferase; choline acetyltransferase; 1.55A {Rattus norvegicus} SCOP: c.43.1.3 c.43.1.3 PDB: 1q6x_A 2fy2_A 2fy3_A 2fy4_A* 2fy5_A*
Probab=45.35 E-value=89 Score=32.16 Aligned_cols=69 Identities=10% Similarity=0.081 Sum_probs=47.5
Q ss_pred eEEEeccCCCCcceeecCCeeeEEeeccCCCCceeEEEEEeeCCeEEEEEEecCCC-CCCHHHHHHHHHHHHHHHHHHHh
Q 012980 365 TFTISNIVGPTEKITLADNPVAYLRANTSSLPHALTMHMMSYAGRADMQILVAKDI-IPDPELLAKCFEDSLLEMKEAAL 443 (452)
Q Consensus 365 ~~~vSNv~g~~~~l~~~g~~v~~~~~~~~~~~~~l~v~v~s~~g~l~l~i~~d~~~-~~~~~~l~~~~~~~l~el~~~~~ 443 (452)
-++.||+|++. + ...++++..+.+.+|+=.--++.+.++|++-..- -.+.+++.+.++++|.++.+...
T Consensus 545 ~LSTSq~~~~~--~--------~~~gfgPv~~dGyGi~Y~i~~~~i~f~iss~~s~~~t~~~rf~~~L~~al~dm~~ll~ 614 (639)
T 1t1u_A 545 VLSTSQVPTTM--E--------MFCCYGPVVPNGYGACYNPQPEAITFCISSFHSCKETSSVEFAEAVGASLVDMRDLCS 614 (639)
T ss_dssp SEEEEECCCSS--S--------EEEECCCSSTTCEEEEEEECSSCEEEEEEEETTSTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEecCCCCCc--c--------ccceEcccCCCceEEEEEEcCCeEEEEEEeCCCCcccCHHHHHHHHHHHHHHHHHHHH
Confidence 47788887642 1 1234444334455565555678999999975322 24899999999999999988766
No 31
>1nm8_A Carnitine O-acetyltransferase; two equally sized domains, anti-parallel beta-strand; 1.60A {Homo sapiens} SCOP: c.43.1.3 c.43.1.3 PDB: 1s5o_A* 2h3u_A* 2h3p_A* 1t7q_A* 1t7n_A 1t7o_A* 1ndb_A 1ndf_A* 1ndi_A* 2h3w_A*
Probab=45.05 E-value=92 Score=31.89 Aligned_cols=71 Identities=13% Similarity=0.181 Sum_probs=48.0
Q ss_pred eEEEeccCCCCcceeecCCeeeEEeeccCCCCceeEEEEEeeCCeEEEEEEecCCC-CCCHHHHHHHHHHHHHHHHHHHh
Q 012980 365 TFTISNIVGPTEKITLADNPVAYLRANTSSLPHALTMHMMSYAGRADMQILVAKDI-IPDPELLAKCFEDSLLEMKEAAL 443 (452)
Q Consensus 365 ~~~vSNv~g~~~~l~~~g~~v~~~~~~~~~~~~~l~v~v~s~~g~l~l~i~~d~~~-~~~~~~l~~~~~~~l~el~~~~~ 443 (452)
-++.||+|++. ....++++..+.+.+|+=.--++.+.++|++-..- -.+.+++.+.++++|.++.+...
T Consensus 529 ~LSTSq~~~~~----------~~~~gfgPv~~dGyGi~Y~i~~~~i~f~iss~~s~~~t~~~rf~~~L~~al~dm~~ll~ 598 (616)
T 1nm8_A 529 HLSTSQVPAKT----------DCVMFFGPVVPDGYGVCYNPMEAHINFSLSAYNSCAETNAARLAHYLEKALLDMRALLQ 598 (616)
T ss_dssp SEEEEECCCSS----------SCEEECCCSSTTCEEEEEEECSSCEEEEEEEETTSTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeecCCCCCc----------cCceEEecCCCCeeEEEEEecCCeEEEEEEeCCCCccccHHHHHHHHHHHHHHHHHHHh
Confidence 47788888742 11233444334455565555678999999975322 24899999999999999988777
Q ss_pred hc
Q 012980 444 TS 445 (452)
Q Consensus 444 ~~ 445 (452)
.+
T Consensus 599 ~~ 600 (616)
T 1nm8_A 599 SH 600 (616)
T ss_dssp C-
T ss_pred cc
Confidence 43
No 32
>2an7_A Protein PARD; bacterial antidote, ribbon-helix-helix, DNA-binding motif, plasmid addiction, DNA binding protein; NMR {Escherichia coli}
Probab=42.75 E-value=17 Score=26.06 Aligned_cols=26 Identities=19% Similarity=0.174 Sum_probs=21.8
Q ss_pred echHHHHHHHHHccCCchhHHHHHHHH
Q 012980 218 FSIDDMKAVKKAIAGATINDVLFGVVS 244 (452)
Q Consensus 218 ~~~~~lk~~a~~~~g~TvndvllAa~a 244 (452)
-....+|++|+.. |.|+|+++.-.++
T Consensus 11 ~qH~rLKalAa~q-G~SInqli~E~lf 36 (83)
T 2an7_A 11 QQHQSLKALAALQ-GKTIKQYALERLF 36 (83)
T ss_dssp HHHHHHHHHHHHH-TSCHHHHHHHHTS
T ss_pred HHHHHHHHHHHHc-CCcHHHHHHHHcc
Confidence 3367899999999 9999999987753
No 33
>2k9i_A Plasmid PRN1, complete sequence; plasmid COPY control protein, ribbon helix helix protein, DNA binding protein; NMR {Sulfolobus islandicus} PDB: 3ft7_A
Probab=42.68 E-value=34 Score=22.05 Aligned_cols=35 Identities=23% Similarity=0.252 Sum_probs=25.1
Q ss_pred EEeechHHHHHHHHHccCCchhHHHHHHHHHHHHHHHhhh
Q 012980 215 TATFSIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHR 254 (452)
Q Consensus 215 ~~~~~~~~lk~~a~~~~g~TvndvllAa~a~al~~~~~~~ 254 (452)
...-..+.++.+|+.. |.|.++++--|+ ..|+.++
T Consensus 16 l~~el~~~l~~~a~~~-g~s~s~~ir~ai----~~~l~~~ 50 (55)
T 2k9i_A 16 IPQEWHDRLMEIAKEK-NLTLSDVCRLAI----KEYLDNH 50 (55)
T ss_dssp ECHHHHHHHHHHHHHH-TCCHHHHHHHHH----HHHHHHH
T ss_pred cCHHHHHHHHHHHHHh-CCCHHHHHHHHH----HHHHHHh
Confidence 3444467899999999 999999776655 4455443
No 34
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=36.50 E-value=16 Score=31.87 Aligned_cols=24 Identities=21% Similarity=0.299 Sum_probs=21.2
Q ss_pred EEEEeecccccccccHHHHHHHhc
Q 012980 119 CAVFRIHHALGDGISLVSMLLAGC 142 (452)
Q Consensus 119 ~l~~~~HH~l~DG~s~~~l~~~l~ 142 (452)
-|.+.+||.+.||.-+.+++..+-
T Consensus 182 ~lsls~DHRvvDG~~aa~Fl~~lk 205 (213)
T 3cla_A 182 PLSVQVHHAVCDGFHVARFINRLQ 205 (213)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHH
T ss_pred EEEEEEcccccChHHHHHHHHHHH
Confidence 688999999999999999987654
No 35
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=35.13 E-value=18 Score=31.76 Aligned_cols=23 Identities=26% Similarity=0.251 Sum_probs=20.8
Q ss_pred EEEEeecccccccccHHHHHHHh
Q 012980 119 CAVFRIHHALGDGISLVSMLLAG 141 (452)
Q Consensus 119 ~l~~~~HH~l~DG~s~~~l~~~l 141 (452)
-|.+.+||.+.||.-+.+++..+
T Consensus 190 ~lsls~DHRvvDG~~aa~Fl~~l 212 (217)
T 2i9d_A 190 PIAMTIHHGFIDGHHLSLFYKKV 212 (217)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHH
T ss_pred EEEEEecchhhChHHHHHHHHHH
Confidence 68899999999999999998765
No 36
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=34.14 E-value=19 Score=31.64 Aligned_cols=25 Identities=28% Similarity=0.348 Sum_probs=21.6
Q ss_pred EEEEeecccccccccHHHHHHHhcc
Q 012980 119 CAVFRIHHALGDGISLVSMLLAGCR 143 (452)
Q Consensus 119 ~l~~~~HH~l~DG~s~~~l~~~l~~ 143 (452)
-|.+.+||.+.||.-+.+++..+-.
T Consensus 186 ~lsls~DHRvvDG~~aa~Fl~~lk~ 210 (219)
T 1q23_A 186 PLAIQVHHAVCDGFHVGRMLNELQQ 210 (219)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHHH
T ss_pred EEEEEEEchhhChHHHHHHHHHHHH
Confidence 6889999999999999999876543
No 37
>2gpe_A Bifunctional protein PUTA; ribbon-helix-helix, DNA-binding domain, proline catabo proline utilization A, DNA binding protein; 1.90A {Escherichia coli} PDB: 2rbf_A* 2jxg_A 2jxh_A 2jxi_A*
Probab=32.56 E-value=88 Score=19.88 Aligned_cols=33 Identities=15% Similarity=0.064 Sum_probs=24.5
Q ss_pred EEeechHHHHHHHHHccCCchhHHHHHHHHHHHH
Q 012980 215 TATFSIDDMKAVKKAIAGATINDVLFGVVSSGLS 248 (452)
Q Consensus 215 ~~~~~~~~lk~~a~~~~g~TvndvllAa~a~al~ 248 (452)
..+-..++++.+|+.. |.|.+.++--|+...+.
T Consensus 10 l~~~l~~~l~~lA~~~-~rs~s~lir~Ai~~yl~ 42 (52)
T 2gpe_A 10 LDDATRERIKSAATRI-DRTPHWLIKQAIFSYLE 42 (52)
T ss_dssp EEHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH-CcCHHHHHHHHHHHHHH
Confidence 4444467899999999 99999987666555443
No 38
>2kel_A SVTR protein, uncharacterized protein 56B; homodimer, ribbon-helix-helix, transcription repres; NMR {Sulfolobus islandicus rod-shaped virus}
Probab=31.29 E-value=89 Score=20.64 Aligned_cols=32 Identities=6% Similarity=-0.061 Sum_probs=23.8
Q ss_pred EEeechHHHHHHHHHccCCchhHHHHHHHHHHH
Q 012980 215 TATFSIDDMKAVKKAIAGATINDVLFGVVSSGL 247 (452)
Q Consensus 215 ~~~~~~~~lk~~a~~~~g~TvndvllAa~a~al 247 (452)
...--..+++.+|... |.|+|+++--|+..++
T Consensus 20 Id~eLH~rlk~~Aa~~-g~Sln~~i~eAL~~yl 51 (56)
T 2kel_A 20 MDKDLKTRLKVYCAKN-NLQLTQAIEEAIKEYL 51 (56)
T ss_dssp EEHHHHHHHHHHHHHS-CCCHHHHHHHHHHHHH
T ss_pred eCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHH
Confidence 3344467889999999 9999998777665543
No 39
>1u9p_A PARC; unknown function; 1.90A {Escherichia coli} SCOP: a.43.1.1
Probab=27.50 E-value=71 Score=24.93 Aligned_cols=33 Identities=15% Similarity=0.235 Sum_probs=25.5
Q ss_pred EEeechHHHHHHHHHccCCchhHHHHHHHHHHHH
Q 012980 215 TATFSIDDMKAVKKAIAGATINDVLFGVVSSGLS 248 (452)
Q Consensus 215 ~~~~~~~~lk~~a~~~~g~TvndvllAa~a~al~ 248 (452)
...--.++++.+|+.. |.|+|..+..++..++.
T Consensus 25 LP~eLh~~La~~Ak~e-GrSLN~eIv~~Le~sl~ 57 (120)
T 1u9p_A 25 WPREVLDLVRKVAEEN-GRSVNSEIYQRVMESFK 57 (120)
T ss_dssp CCHHHHHHHHHHHHHH-TCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHhc
Confidence 3334467889999999 99999998888766543
No 40
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=26.82 E-value=25 Score=30.95 Aligned_cols=31 Identities=19% Similarity=0.321 Sum_probs=24.5
Q ss_pred EEEEeecccccccccHHHHHHHhcccCCCCC
Q 012980 119 CAVFRIHHALGDGISLVSMLLAGCRLADDPE 149 (452)
Q Consensus 119 ~l~~~~HH~l~DG~s~~~l~~~l~~~~~~~~ 149 (452)
.+.+.+||-+.||.-+.+++..+-+.-.+|.
T Consensus 188 ~lsls~DHRviDGa~aa~Fl~~l~~~le~p~ 218 (224)
T 3rqc_A 188 YLSLSCDHRLIDGAVATRFIVDLKKVIEDPN 218 (224)
T ss_dssp CEEEEEETTTSCHHHHHHHHHHHHHHHTCTT
T ss_pred EEEEEeccceecHHHHHHHHHHHHHHHhCHH
Confidence 3889999999999999999887655433443
No 41
>2cpg_A REPA protein, transcriptional repressor COPG; DNA-binding protein, plasmid, gene regulation; 1.60A {Streptococcus agalactiae} SCOP: a.43.1.3 PDB: 1b01_A* 1ea4_A*
Probab=26.23 E-value=1.1e+02 Score=18.46 Aligned_cols=35 Identities=9% Similarity=0.262 Sum_probs=25.0
Q ss_pred EEEeechHHHHHHHHHccCCchhHHHHHHHHHHHHHHHhh
Q 012980 214 ATATFSIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDH 253 (452)
Q Consensus 214 ~~~~~~~~~lk~~a~~~~g~TvndvllAa~a~al~~~~~~ 253 (452)
....-..+++.++|+.. |.|-+.++-.| +..|+..
T Consensus 8 ~l~~~l~~~Ld~~a~~~-g~srS~~ir~a----i~~~l~~ 42 (45)
T 2cpg_A 8 TLSESVLENLEKMAREM-GLSKSAMISVA----LENYKKG 42 (45)
T ss_dssp EEEHHHHHHHHHHHHHH-TCCHHHHHHHH----HHHHHHC
T ss_pred ecCHHHHHHHHHHHHHH-CcCHHHHHHHH----HHHHHHH
Confidence 34445578899999999 99998877555 4556543
No 42
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=25.33 E-value=29 Score=30.79 Aligned_cols=25 Identities=16% Similarity=0.105 Sum_probs=21.8
Q ss_pred EEEEeecccccccccHHHHHHHhcc
Q 012980 119 CAVFRIHHALGDGISLVSMLLAGCR 143 (452)
Q Consensus 119 ~l~~~~HH~l~DG~s~~~l~~~l~~ 143 (452)
-+.+.+||-+.||.-+.+++..+-+
T Consensus 205 ~lsls~DHRviDGa~aa~Fl~~lk~ 229 (239)
T 3b8k_A 205 SVTLSCDHRVVDGAVGAQWLAEFRK 229 (239)
T ss_dssp EEEECCCCCSSCHHHHHHHHHHHHH
T ss_pred EEEEEEcceeechHHHHHHHHHHHH
Confidence 5899999999999999999876644
No 43
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=24.20 E-value=35 Score=30.16 Aligned_cols=25 Identities=24% Similarity=0.224 Sum_probs=21.7
Q ss_pred EEEEeecccccccccHHHHHHHhcc
Q 012980 119 CAVFRIHHALGDGISLVSMLLAGCR 143 (452)
Q Consensus 119 ~l~~~~HH~l~DG~s~~~l~~~l~~ 143 (452)
-+.+.+||-+.||.-+.+++..+-+
T Consensus 197 ~lsls~DHRviDGa~aa~Fl~~lk~ 221 (233)
T 1scz_A 197 YLALSYDHRLIDGRESVGFLVTIKE 221 (233)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHHH
T ss_pred EEEEEEcceeechHHHHHHHHHHHH
Confidence 4889999999999999999876654
No 44
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=24.09 E-value=35 Score=30.37 Aligned_cols=25 Identities=4% Similarity=-0.126 Sum_probs=21.8
Q ss_pred EEEEeecccccccccHHHHHHHhcc
Q 012980 119 CAVFRIHHALGDGISLVSMLLAGCR 143 (452)
Q Consensus 119 ~l~~~~HH~l~DG~s~~~l~~~l~~ 143 (452)
-+.+.+||-+.||.-+.+++..+-+
T Consensus 209 ~lsls~DHRviDGa~aa~Fl~~lk~ 233 (243)
T 1dpb_A 209 PLSLSYDCRVINGAAAARFTKRLGD 233 (243)
T ss_dssp EEEEEEETTTSCHHHHHHHHHHHHH
T ss_pred EEEEEECcccccHHHHHHHHHHHHH
Confidence 5889999999999999999876654
No 45
>2ay0_A Bifunctional PUTA protein; ribbon-helix-helix, DNA-binding domain, proline catabo proline utilization A, DNA binding protein; 2.10A {Escherichia coli} SCOP: a.43.1.11
Probab=22.94 E-value=1.2e+02 Score=20.15 Aligned_cols=33 Identities=15% Similarity=0.206 Sum_probs=24.5
Q ss_pred EeechHHHHHHHHHccCCchhHHHHHHHHHHHHHHHhh
Q 012980 216 ATFSIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDH 253 (452)
Q Consensus 216 ~~~~~~~lk~~a~~~~g~TvndvllAa~a~al~~~~~~ 253 (452)
.+...++++++|++. |.|.+.++--| +..|+.+
T Consensus 11 ~~el~~rL~~lA~~~-~rs~s~lireA----i~~yl~~ 43 (58)
T 2ay0_A 11 DDATRERIKSAATRI-DRTPHWLIKQA----IFSYLEQ 43 (58)
T ss_dssp CHHHHHHHHHHHHHT-TCCHHHHHHHH----HHHHHHH
T ss_pred CHHHHHHHHHHHHHH-CcCHHHHHHHH----HHHHHHH
Confidence 333467899999999 99999986555 4556654
No 46
>1y9b_A Conserved hypothetical protein; MCSG, structural genomics, conserved hypoth protein, PSI, protein structure initiative; 2.20A {Vibrio cholerae o1 biovar eltor} SCOP: a.43.1.9
Probab=21.89 E-value=1.4e+02 Score=21.81 Aligned_cols=34 Identities=12% Similarity=0.229 Sum_probs=27.2
Q ss_pred hHHHHHHHHHccC-CchhHHHHHHHHHHHHHHHhhh
Q 012980 220 IDDMKAVKKAIAG-ATINDVLFGVVSSGLSRYLDHR 254 (452)
Q Consensus 220 ~~~lk~~a~~~~g-~TvndvllAa~a~al~~~~~~~ 254 (452)
-+.|+..|... | .|+|+.++.+....-.+-+.++
T Consensus 17 k~lI~~AA~~~-G~~s~s~Fv~~aa~~~A~~vi~~~ 51 (90)
T 1y9b_A 17 QDLLAKAAALA-GMSSINSFVLNAAIEKAKQVIERE 51 (90)
T ss_dssp HHHHHHHHHHT-TCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhc
Confidence 45677888888 9 5999999999888777766654
No 47
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=21.56 E-value=42 Score=30.25 Aligned_cols=25 Identities=12% Similarity=0.068 Sum_probs=21.7
Q ss_pred EEEEeecccccccccHHHHHHHhcc
Q 012980 119 CAVFRIHHALGDGISLVSMLLAGCR 143 (452)
Q Consensus 119 ~l~~~~HH~l~DG~s~~~l~~~l~~ 143 (452)
-+.+.+||-+.||.-+.+++..+-+
T Consensus 225 ~lsls~DHRviDGa~aa~Fl~~lk~ 249 (262)
T 2ii3_A 225 NVSWSADHRIIDGATVSRFSNLWKS 249 (262)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHHH
T ss_pred EEEEEECcceecHHHHHHHHHHHHH
Confidence 5889999999999999999876654
No 48
>3ign_A Diguanylate cyclase; ggdef domain, A1U3W3_marav, NESG, MQR89A, structural genomics, PSI-2, protein structure initiative; HET: C2E; 1.83A {Marinobacter aquaeolei VT8}
Probab=21.50 E-value=3.1e+02 Score=21.80 Aligned_cols=120 Identities=9% Similarity=0.106 Sum_probs=70.2
Q ss_pred EEEEEeechHHHHHHHHHccCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCC--cchhhhhhccC
Q 012980 212 KLATATFSIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPG--LQDLSNLMKSN 289 (452)
Q Consensus 212 ~~~~~~~~~~~lk~~a~~~~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~~~--~~~~~~~~~~~ 289 (452)
.+...-+.++.++.+...+ |-..-|-++..++..|+..+.....-..-.++.+.+.+|-.-..... .+.+.+.....
T Consensus 39 ~~~l~~i~id~f~~in~~~-G~~~gd~~L~~ia~~L~~~~~~~~~~~R~~~d~F~ill~~~~~~~~~~~~~~i~~~~~~~ 117 (177)
T 3ign_A 39 ATSLVMFDIDHFKPVNDTY-GHLAGDEVIRHTADVTRNNIRQSDSAGRYGGEEFGIILPETDAESARVICERIREAIEKS 117 (177)
T ss_dssp CEEEEEEEETTHHHHHHHH-CHHHHHHHHHHHHHHHHTTSCTTSEEEECSSSEEEEEEETCCHHHHHHHHHHHHHHHHTC
T ss_pred ceEEEEEEchhhHHHHHhh-ChHHHHHHHHHHHHHHHHhCCCCCEEEEecCCeEEEEeCCCCHHHHHHHHHHHHHHHHhc
Confidence 3556678888999999999 99999999999999998877543200002235777888732110000 00000000000
Q ss_pred C----CCCCCceEEEEEEEccCCCCCCCHHHHHHHHHHHHHHhhhccch
Q 012980 290 S----GTRWGNKFGMLLLPIYYHKGGADPLSYVKRAKKMIDSKKLTLEG 334 (452)
Q Consensus 290 ~----~~~~gN~~~~~~~~l~~p~~~~d~~~~l~~v~~~~~~~k~~~~~ 334 (452)
. .....-.++...... |.+..++.+.++.+...+..+|+....
T Consensus 118 ~~~~~~~~~~~~~siGi~~~--~~~~~~~~~ll~~A~~Al~~Ak~~g~n 164 (177)
T 3ign_A 118 TVSTSAGDIQYTVSMGIAQL--TETPENYMQWMQKADEALYKAKESGRN 164 (177)
T ss_dssp CEECSSCEECCCEEEEEEEC--CSCCSSHHHHHHHHHHHHHHHHHTTSS
T ss_pred CcccCCCceeEEEEEEEEec--CCCCCCHHHHHHHHHHHHHHHHHcCCC
Confidence 0 001111233344445 555467888899999999988876653
No 49
>3hva_A Protein FIMX; ggdef diguanylate cyclase, biofilm, C-DI-GMP, transferase; 2.04A {Pseudomonas aeruginosa PAO1}
Probab=21.35 E-value=3.1e+02 Score=21.76 Aligned_cols=118 Identities=13% Similarity=0.070 Sum_probs=70.7
Q ss_pred EEEEEeechHHHHHHHHHccCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCC--cchhhhhhccC
Q 012980 212 KLATATFSIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPG--LQDLSNLMKSN 289 (452)
Q Consensus 212 ~~~~~~~~~~~lk~~a~~~~g~TvndvllAa~a~al~~~~~~~~~~~~~~~~~l~~~vPv~lR~~~~--~~~~~~~~~~~ 289 (452)
.+...-+.++.++.+...+ |-..-|-++..++..|+..+....--..-.++.+.+.+|-.-..... ...+.+.+..
T Consensus 44 ~~~l~~i~id~f~~in~~~-G~~~gd~~L~~~a~~L~~~~~~~~~~~R~~~d~F~ill~~~~~~~~~~~~~~i~~~~~~- 121 (177)
T 3hva_A 44 PSTLAYIHLNGYPSLQADH-GLSGIDLLLGQLAGLMREQFGEEADLARFGDSIFAALFKGKTPEQAQAALQRLLKKVEN- 121 (177)
T ss_dssp CEEEEEEEETTHHHHHHHH-HHHHHHHHHHHHHHHHHHHHGGGCEEEECSSSEEEEEEETCCHHHHHHHHHHHHHHHHT-
T ss_pred CeEEEEEeCCCHHHHHHHh-CchhHHHHHHHHHHHHHHhCCCCceEEEecCCeEEEEeCCCCHHHHHHHHHHHHHHHHh-
Confidence 4567778889999999999 99999999999999999998764310002235788888732110000 0000000000
Q ss_pred CCCC-----CCceEEEEEEEccCCCCCCCHHHHHHHHHHHHHHhhhccc
Q 012980 290 SGTR-----WGNKFGMLLLPIYYHKGGADPLSYVKRAKKMIDSKKLTLE 333 (452)
Q Consensus 290 ~~~~-----~gN~~~~~~~~l~~p~~~~d~~~~l~~v~~~~~~~k~~~~ 333 (452)
.... ..-.++...... |.+..++.+.++.+...+..+|....
T Consensus 122 ~~~~~~~~~~~~~~siGi~~~--~~~~~~~~~ll~~A~~Al~~ak~~g~ 168 (177)
T 3hva_A 122 HLFELNGRSAQATLSIGVAGL--DEKTAKAQDVMNRAHRCADDAARKGG 168 (177)
T ss_dssp CCEEETTEEECCCEEEEEEEE--CTTCCCHHHHHHHHHHHHHHHHTTCS
T ss_pred CccccCCceeeEEEEEEEEEc--CCCCCCHHHHHHHHHHHHHHHHHhCC
Confidence 0001 111133334445 55446788889999999998887654
No 50
>2bsq_E FITA, trafficking protein A; transcription, transcription regulation complex, PIN domain, ribbon-helix-helix, DNA binding; HET: 5IU; 3.0A {Neisseria gonorrhoeae} SCOP: a.43.1.8 PDB: 2h1o_E*
Probab=21.05 E-value=1.2e+02 Score=21.54 Aligned_cols=28 Identities=11% Similarity=0.080 Sum_probs=24.3
Q ss_pred hHHHHHHHHHccCCchhHHHHHHHHHHHH
Q 012980 220 IDDMKAVKKAIAGATINDVLFGVVSSGLS 248 (452)
Q Consensus 220 ~~~lk~~a~~~~g~TvndvllAa~a~al~ 248 (452)
...+|..|+.+ |-|+|+.+..++..++.
T Consensus 13 ~~~Lk~rAa~~-GrSle~e~r~iL~~a~~ 40 (77)
T 2bsq_E 13 HNAIKFRARAA-GRSTEAEIRLILDNIAK 40 (77)
T ss_dssp HHHHHHHHHHT-TCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-CCCHHHHHHHHHHHHHc
Confidence 46788899999 99999999998888765
No 51
>3f42_A Protein HP0035; helicobacter pylori unknown-function, structural genomics, P protein structure initiative; HET: MSE; 1.78A {Helicobacter pylori}
Probab=20.81 E-value=1.8e+02 Score=21.75 Aligned_cols=43 Identities=12% Similarity=0.191 Sum_probs=29.7
Q ss_pred eEEEEEeeCCeEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 012980 399 LTMHMMSYAGRADMQILVAKDIIPDPELLAKCFEDSLLEMKEAAL 443 (452)
Q Consensus 399 l~v~v~s~~g~l~l~i~~d~~~~~~~~~l~~~~~~~l~el~~~~~ 443 (452)
+.|++. -++.+ .+|.-|+.++.|.+.|.+.+..++++-.+-+.
T Consensus 40 V~Vt~~-G~~ev-~~i~Idp~~~eD~E~LeDLI~aA~ndA~~k~~ 82 (99)
T 3f42_A 40 VSVSFN-GLGEL-VDLQIDDSLLEDKEAMQIYLMSALNDGYKAVE 82 (99)
T ss_dssp EEEEEE-TTSCE-EEEEECGGGGGCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEe-cCceE-EEEEECHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 444442 23333 67777888788899999999999977665554
Done!