Query 012981
Match_columns 452
No_of_seqs 260 out of 1846
Neff 10.6
Searched_HMMs 29240
Date Mon Mar 25 19:57:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012981.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012981hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mkt_A Multi antimicrobial ext 100.0 9.5E-49 3.2E-53 383.7 30.9 414 33-449 5-431 (460)
2 3mkt_A Multi antimicrobial ext 99.9 3.5E-21 1.2E-25 188.0 19.3 205 36-241 234-445 (460)
3 3o7q_A L-fucose-proton symport 67.6 75 0.0026 29.1 27.2 39 42-80 28-68 (438)
4 2ks1_B Epidermal growth factor 28.3 95 0.0032 18.2 4.2 8 234-241 30-37 (44)
5 2l2t_A Receptor tyrosine-prote 27.7 84 0.0029 18.5 3.5 6 236-241 31-36 (44)
6 2jwa_A Receptor tyrosine-prote 24.0 94 0.0032 18.3 3.2 6 236-241 32-37 (44)
7 2k1k_A Ephrin type-A receptor 21.4 85 0.0029 17.7 2.7 17 219-235 15-31 (38)
8 4hkr_A Calcium release-activat 14.4 5E+02 0.017 21.1 14.5 81 71-152 56-144 (214)
9 1qle_D Cytochrome AA3, ccytoch 6.7 4.4E+02 0.015 15.3 5.1 31 330-360 5-35 (43)
10 2iub_A CORA, divalent cation t 5.8 8.5E+02 0.029 21.6 5.7 12 232-243 350-361 (363)
No 1
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=100.00 E-value=9.5e-49 Score=383.67 Aligned_cols=414 Identities=25% Similarity=0.398 Sum_probs=382.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCc
Q 012981 33 KKIIEEVKRQLWLSGPLISVSLLQFCLQMISVMFVGHLGELPLSGASMATSFATVTGFSFLVGLSSALETLCGQSYGAKQ 112 (452)
Q Consensus 33 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~i~~lg~~~~a~~~~~~~i~~~~~~~~~~gl~~~~~~~~~~~~~~~~ 112 (452)
+..++..|++++.++|.+++++...+.+.+|+.+++|+|++++|+++++.++..+. ..+..|++.+..+.++|++|++|
T Consensus 5 ~~~~~~~k~~~~~~~p~~~~~~~~~~~~~v~~~~~~~lg~~~~~~~~~~~~i~~~~-~~~~~g~~~~~~~~is~~~g~~~ 83 (460)
T 3mkt_A 5 HRYKKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPS-ILFGVGLLMALVPVVAQLNGAGR 83 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTTTTSSHHHHHHHHHHHH-HHHHHHHHHHHGGGCTTTTSSSS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCC
Confidence 34567889999999999999999999999999999999999999999999998887 78889999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCChhHHH
Q 012981 113 YHMLGIHMQRGMFVLLLISVPLALIWANTESLLVAAHQDSEISKEAGLYARYMIPSIFAYAILQCLVRFLQTQNIVFPMV 192 (452)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 192 (452)
+|+.++.++.++.+....+++.++++++.++++.+++.+++..+.+..|+++..++.++..+...+.+.+++.||++.++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 163 (460)
T 3mkt_A 84 QHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEAMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAM 163 (460)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCSSTTHHHHHHHHHHTTGGGHHHHHHHHHHHTTTTCTTSCCTTTH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH
Confidence 99999999999999999998877667788888888888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhh----cCCccchhhHHHHHHHHHHHHHHHHHHHhcccccc-c-cCCccHHHHHhHHHHHHH
Q 012981 193 LSSGITALLHILVCWILVFK----SGLGSRGAALANSISYWINVLLLAIYVKFSSSCAK-T-WTGFSKEALNNVFNFVRL 266 (452)
Q Consensus 193 ~~~~~~~~~~i~~~~~li~~----~~~g~~g~~~a~~i~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~ 266 (452)
..++++.++|+++++++++. +++|+.|+++++.+++.+..++..++.+++++.+. + ++++.+.+++..|+++++
T Consensus 164 ~~~~~~~~~~i~l~~~li~~~~~~p~~g~~g~a~a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 243 (460)
T 3mkt_A 164 VIGFIGLLLNIPLNWIFVYGKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRL 243 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCCCSCCCCSSTTSSTTTSHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHhCcchhhhhhhhcccccCHHHHHHHHHH
Confidence 99999999999999999975 27999999999999999999998888766543321 1 123323467889999999
Q ss_pred HhhhHHHHHHHHHHHHHHHHHhhcCCCchhhhHHHHHHHHHhHHHHHHHHhhhhHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012981 267 AIPSAVMVCLEMWSFEMMVLLSGLLPNPALETSVLSISLNTASTVWMIPFGLSGAASTRVSNELGAGHPEAARLAVCVVL 346 (452)
Q Consensus 267 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 346 (452)
+.|.++++....+.+..++.+++.++ ++++|+|++++++.++..++..+++++..|.+++++|++|.++.++..+++.
T Consensus 244 ~~p~~~~~~~~~~~~~~~~~~~~~~g--~~~va~~~i~~~i~~~~~~~~~~~~~a~~p~i~~~~g~~~~~~~~~~~~~~~ 321 (460)
T 3mkt_A 244 GFPVAAALFFEVTLFAVVALLVAPLG--STVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQDTKGAAIAANVGL 321 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCTTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCTTTTHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 99999999999999999999999996 7799999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhHHHhhhccCcHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhcCcchhhHHHHHHHHHHHh
Q 012981 347 VMAVTEGILVGSVLILIRNVWGYAYSNEIEVVKYVASMLPILAASNFLDGLQCVLSGIARGCGWQMIGAFVNLGSYYLVG 426 (452)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 426 (452)
++...++++++++++++++++.++|++|+|+.+.+..++++++++.++.+++.+..+.+++.||+|.+++.++.+.|+++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 401 (460)
T 3mkt_A 322 MTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLG 401 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCSSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998889999999999999999999999999999999999999999999988999
Q ss_pred HHHHHHHHHH-------hCCceeEEEeEee
Q 012981 427 IPSAILLAFL-------LHFGGRVKGFSFF 449 (452)
Q Consensus 427 i~l~~~l~~~-------~g~~g~~~a~~~~ 449 (452)
+|+++++.+. +|..|+|++..++
T Consensus 402 i~l~~~l~~~~~~~~~~~G~~G~~~a~~~~ 431 (460)
T 3mkt_A 402 LPTGYILGMTNWLTEQPLGAKGFWLGFIIG 431 (460)
T ss_dssp HHHHHHHHHHHTSSCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhccccccCchhHHHHHHHH
Confidence 9999999999 8999998887654
No 2
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=99.87 E-value=3.5e-21 Score=188.02 Aligned_cols=205 Identities=17% Similarity=0.196 Sum_probs=190.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhCCCccch
Q 012981 36 IEEVKRQLWLSGPLISVSLLQFCLQMISVMFVGHLGELPLSGASMATSFATVTGFSFLVGLSSALETLCGQSYGAKQYHM 115 (452)
Q Consensus 36 ~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~i~~lg~~~~a~~~~~~~i~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~ 115 (452)
++..|++++.+.|..++++...+...+|+.+++++|++++|+|+++.++.++. ..+..+++++..|.+++++|++|+|+
T Consensus 234 ~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~va~~~i~~~i~~~~-~~~~~~~~~a~~p~i~~~~g~~~~~~ 312 (460)
T 3mkt_A 234 PKELIRLFRLGFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLV-FMFPMSIGAAVSIRVGHKLGEQDTKG 312 (460)
T ss_dssp TSSTTTSHHHHHHHHHHHHHHHHHHHHHHHHTCTTSSHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 45678999999999999999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHhhHHHHHHcCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCChhHHHHH
Q 012981 116 LGIHMQRGMFVLLLISVPLALI-WANTESLLVAAHQDSEISKEAGLYARYMIPSIFAYAILQCLVRFLQTQNIVFPMVLS 194 (452)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 194 (452)
.++..+.+..+...++++.+++ .++.+++..++..|++..+.+..++++.+++.++.++.....+.+++.||+|.++..
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 392 (460)
T 3mkt_A 313 AAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHR 392 (460)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHH
Confidence 9999999999999999998887 778999999998888888999999999999999999999999999999999999999
Q ss_pred HHHHH-HHHHHHHHHHHhh----cC-CccchhhHHHHHHHHHHHHHHHHHHHh
Q 012981 195 SGITA-LLHILVCWILVFK----SG-LGSRGAALANSISYWINVLLLAIYVKF 241 (452)
Q Consensus 195 ~~~~~-~~~i~~~~~li~~----~~-~g~~g~~~a~~i~~~~~~~~~~~~~~~ 241 (452)
++++. ++++++++++... ++ +|+.|+++++.+++.+..++..+..+|
T Consensus 393 ~~~~~~~~~i~l~~~l~~~~~~~~~~~G~~G~~~a~~~~~~~~~~~~~~~~~~ 445 (460)
T 3mkt_A 393 TFISYWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFIIGLSAAALMLGQRLYW 445 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSSCCSSHHHHHHHHHHHHHHHHHHHHHSSSSS
T ss_pred HHHHHHHHHHHHHHHHHhhhhccccccCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998 7999999999875 45 999999999999999998887665543
No 3
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*
Probab=67.59 E-value=75 Score=29.08 Aligned_cols=39 Identities=5% Similarity=-0.064 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccC--hhhHHHHHH
Q 012981 42 QLWLSGPLISVSLLQFCLQMISVMFVGHLG--ELPLSGASM 80 (452)
Q Consensus 42 ~~~~~~p~~~~~~~~~~~~~i~~~~i~~lg--~~~~a~~~~ 80 (452)
+.....-.+...............+..++| +.+.+....
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~ 68 (438)
T 3o7q_A 28 FALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQS 68 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 333343444444444444444444444454 444444433
No 4
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=28.26 E-value=95 Score=18.23 Aligned_cols=8 Identities=0% Similarity=0.330 Sum_probs=3.2
Q ss_pred HHHHHHHh
Q 012981 234 LLAIYVKF 241 (452)
Q Consensus 234 ~~~~~~~~ 241 (452)
..++++++
T Consensus 30 ~~~~~~RR 37 (44)
T 2ks1_B 30 GIGLFMRR 37 (44)
T ss_dssp HHHHHHHT
T ss_pred HHHHHhhh
Confidence 33444443
No 5
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=27.72 E-value=84 Score=18.45 Aligned_cols=6 Identities=50% Similarity=0.899 Sum_probs=2.4
Q ss_pred HHHHHh
Q 012981 236 AIYVKF 241 (452)
Q Consensus 236 ~~~~~~ 241 (452)
++++++
T Consensus 31 ~~~~RR 36 (44)
T 2l2t_A 31 AVYVRR 36 (44)
T ss_dssp HHHHHT
T ss_pred HHHhhh
Confidence 344443
No 6
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=24.04 E-value=94 Score=18.25 Aligned_cols=6 Identities=33% Similarity=0.423 Sum_probs=2.6
Q ss_pred HHHHHh
Q 012981 236 AIYVKF 241 (452)
Q Consensus 236 ~~~~~~ 241 (452)
..+++|
T Consensus 32 ~~~~RR 37 (44)
T 2jwa_A 32 GILIKR 37 (44)
T ss_dssp HHHHHH
T ss_pred Hhheeh
Confidence 344443
No 7
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=21.37 E-value=85 Score=17.70 Aligned_cols=17 Identities=6% Similarity=-0.025 Sum_probs=7.1
Q ss_pred hhhHHHHHHHHHHHHHH
Q 012981 219 GAALANSISYWINVLLL 235 (452)
Q Consensus 219 g~~~a~~i~~~~~~~~~ 235 (452)
|+.++.+++-.+...+.
T Consensus 15 GiVvG~v~gv~li~~l~ 31 (38)
T 2k1k_A 15 AVIFGLLLGAALLLGIL 31 (38)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred eeehHHHHHHHHHHHHH
Confidence 44444444444333333
No 8
>4hkr_A Calcium release-activated calcium channel protein; ORAI1, eukaryotic membrane protein, membran protein, ION channel, STIM, membrane; 3.35A {Drosophila melanogaster} PDB: 4hks_A
Probab=14.39 E-value=5e+02 Score=21.11 Aligned_cols=81 Identities=9% Similarity=-0.035 Sum_probs=47.7
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhC--------CCccchHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 012981 71 GELPLSGASMATSFATVTGFSFLVGLSSALETLCGQSYG--------AKQYHMLGIHMQRGMFVLLLISVPLALIWANTE 142 (452)
Q Consensus 71 g~~~~a~~~~~~~i~~~~~~~~~~gl~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (452)
.+.-+.+|++...+.-.+ ..+..-+++-+.|.+-..-+ +.-.++.+.++.....++..+++++.+.-+...
T Consensus 56 p~~LLi~fav~Ttllv~v-ml~AlMIsTcILPnIeav~~~h~~~~v~esPH~r~~~yIE~AW~fST~lGi~LFL~evall 134 (214)
T 4hkr_A 56 PPGMLIAFAICTTLLVAV-HMLALMISTCILPNIETVSNLHSISLVHESPHERLHWYIETAWAFSTLLGLILFLLEIAIL 134 (214)
T ss_dssp ---CHHHHHHHHHHHHHH-HHHHHHHHHHTTTC----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHH-HHHHHHHHHHhHHHHHHHhhcccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344577888888877766 66666666666665544321 223467788888888888888777766644444
Q ss_pred HHHHHcCCCH
Q 012981 143 SLLVAAHQDS 152 (452)
Q Consensus 143 ~~~~~~~~~~ 152 (452)
-++.++..++
T Consensus 135 ~WVKF~~~~~ 144 (214)
T 4hkr_A 135 CWVKFYDLSR 144 (214)
T ss_dssp HHHHHTTTCH
T ss_pred heEEeecCCc
Confidence 4556665553
No 9
>1qle_D Cytochrome AA3, ccytochrome C oxidase; oxidoreductase/immune system, complex (oxidoreductase/antibody), electron transport; HET: HEA PC1; 3.0A {Paracoccus denitrificans} SCOP: f.23.8.1
Probab=6.68 E-value=4.4e+02 Score=15.26 Aligned_cols=31 Identities=19% Similarity=0.032 Sum_probs=18.0
Q ss_pred hcCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012981 330 LGAGHPEAARLAVCVVLVMAVTEGILVGSVL 360 (452)
Q Consensus 330 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (452)
.|+-|+.+-++...--+++.-..++.+..++
T Consensus 5 hG~MD~~~hE~Ty~gFi~~~k~gt~~~~~~l 35 (43)
T 1qle_D 5 HGEMDIRHQQATFAGFIKGATWVSILSIAVL 35 (43)
T ss_dssp TTCSCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777777776666555555444444443
No 10
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=5.81 E-value=8.5e+02 Score=21.64 Aligned_cols=12 Identities=17% Similarity=0.520 Sum_probs=4.9
Q ss_pred HHHHHHHHHhcc
Q 012981 232 VLLLAIYVKFSS 243 (452)
Q Consensus 232 ~~~~~~~~~~~~ 243 (452)
++..+++++|++
T Consensus 350 ~~~~~~~Fkrk~ 361 (363)
T 2iub_A 350 AVIMVVYFKKKK 361 (363)
T ss_dssp HHHHHTTTTSCC
T ss_pred HHHHHHHHHHcc
Confidence 334444444333
Done!