Query 012982
Match_columns 452
No_of_seqs 201 out of 1288
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 08:19:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012982.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012982hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 9E-103 2E-107 786.4 36.2 388 30-436 40-451 (454)
2 PF00450 Peptidase_S10: Serine 100.0 5E-97 1E-101 760.0 26.9 384 30-432 7-415 (415)
3 PLN03016 sinapoylglucose-malat 100.0 7.5E-95 1.6E-99 737.1 37.6 395 21-435 20-433 (433)
4 PTZ00472 serine carboxypeptida 100.0 3.5E-94 7.5E-99 741.0 40.3 392 29-435 42-461 (462)
5 PLN02209 serine carboxypeptida 100.0 1.5E-93 3.2E-98 727.6 38.2 392 24-435 25-437 (437)
6 PLN02213 sinapoylglucose-malat 100.0 5.5E-70 1.2E-74 538.4 26.2 304 117-435 1-319 (319)
7 COG2939 Carboxypeptidase C (ca 100.0 1.5E-69 3.3E-74 538.9 24.0 389 34-436 67-494 (498)
8 KOG1283 Serine carboxypeptidas 100.0 2.9E-69 6.3E-74 502.3 17.8 377 35-430 4-411 (414)
9 TIGR03611 RutD pyrimidine util 99.4 4.8E-11 1E-15 112.8 18.8 106 66-216 12-117 (257)
10 TIGR01250 pro_imino_pep_2 prol 99.3 5E-11 1.1E-15 114.4 17.7 129 35-215 3-132 (288)
11 PLN02824 hydrolase, alpha/beta 99.3 2.9E-10 6.2E-15 111.3 19.6 105 67-214 29-137 (294)
12 PRK10673 acyl-CoA esterase; Pr 99.3 2.8E-10 6.1E-15 108.4 18.6 102 64-212 13-114 (255)
13 PRK03204 haloalkane dehalogena 99.3 8.1E-10 1.8E-14 107.9 22.0 126 31-214 11-136 (286)
14 PHA02857 monoglyceride lipase; 99.3 8.7E-10 1.9E-14 106.7 21.1 123 46-215 10-133 (276)
15 PRK00870 haloalkane dehalogena 99.2 3.4E-09 7.4E-14 104.2 20.4 136 25-213 12-149 (302)
16 PLN02385 hydrolase; alpha/beta 99.2 2.2E-09 4.9E-14 107.9 19.2 125 46-214 71-197 (349)
17 PLN02298 hydrolase, alpha/beta 99.2 4.6E-09 1E-13 104.6 21.1 137 35-215 33-170 (330)
18 PF12697 Abhydrolase_6: Alpha/ 99.1 4.1E-10 8.9E-15 103.5 10.7 104 70-217 1-104 (228)
19 TIGR03056 bchO_mg_che_rel puta 99.1 3.3E-09 7.2E-14 102.0 17.5 106 66-216 27-132 (278)
20 PLN02679 hydrolase, alpha/beta 99.1 3.7E-08 8.1E-13 99.5 22.9 131 32-213 59-190 (360)
21 PRK03592 haloalkane dehalogena 99.0 9.2E-09 2E-13 100.6 17.4 104 67-216 27-130 (295)
22 PLN02578 hydrolase 99.0 3.3E-08 7.2E-13 99.6 21.6 100 68-213 87-186 (354)
23 PRK06489 hypothetical protein; 99.0 3.2E-08 7E-13 99.9 21.4 59 344-432 292-356 (360)
24 TIGR02240 PHA_depoly_arom poly 99.0 9.5E-09 2.1E-13 99.6 16.9 117 46-215 11-127 (276)
25 PRK10349 carboxylesterase BioH 99.0 6.1E-09 1.3E-13 99.6 15.2 59 344-431 196-254 (256)
26 TIGR02427 protocat_pcaD 3-oxoa 99.0 2.4E-08 5.3E-13 93.3 18.4 58 344-430 193-250 (251)
27 TIGR03343 biphenyl_bphD 2-hydr 99.0 2.9E-08 6.4E-13 96.0 19.5 59 344-431 223-281 (282)
28 KOG4409 Predicted hydrolase/ac 99.0 2.9E-08 6.2E-13 96.3 18.7 139 28-216 59-197 (365)
29 TIGR01738 bioH putative pimelo 99.0 2.3E-08 4.9E-13 93.3 17.4 58 344-430 188-245 (245)
30 PLN02894 hydrolase, alpha/beta 99.0 5.8E-08 1.3E-12 99.5 20.7 107 66-213 104-210 (402)
31 PRK10749 lysophospholipase L2; 99.0 3.3E-08 7.2E-13 98.6 17.8 133 36-215 32-167 (330)
32 PLN02652 hydrolase; alpha/beta 98.9 2.6E-08 5.7E-13 101.6 16.8 127 46-215 120-246 (395)
33 PRK11126 2-succinyl-6-hydroxy- 98.9 2.3E-08 5E-13 94.5 15.2 100 67-213 2-101 (242)
34 TIGR03695 menH_SHCHC 2-succiny 98.9 1.9E-08 4.1E-13 93.8 14.3 105 67-214 1-105 (251)
35 PLN03087 BODYGUARD 1 domain co 98.9 1.6E-07 3.5E-12 97.6 21.5 137 29-212 171-307 (481)
36 PRK07581 hypothetical protein; 98.9 8.6E-08 1.9E-12 95.9 18.7 59 344-431 275-334 (339)
37 PLN03084 alpha/beta hydrolase 98.9 1.8E-07 3.8E-12 95.1 20.6 134 28-214 98-232 (383)
38 TIGR01249 pro_imino_pep_1 prol 98.9 3.1E-07 6.8E-12 90.5 21.9 127 35-215 5-131 (306)
39 PRK08775 homoserine O-acetyltr 98.8 3.7E-07 8.1E-12 91.5 21.0 63 344-434 277-340 (343)
40 PRK14875 acetoin dehydrogenase 98.7 4.8E-07 1E-11 91.3 18.0 102 66-213 130-231 (371)
41 PLN02980 2-oxoglutarate decarb 98.7 4.1E-07 8.9E-12 107.8 20.0 106 65-213 1369-1479(1655)
42 PRK00175 metX homoserine O-ace 98.7 1.9E-06 4E-11 87.8 21.5 64 344-432 309-373 (379)
43 PLN02965 Probable pheophorbida 98.7 2.3E-07 4.9E-12 88.9 13.3 59 344-431 193-251 (255)
44 COG1506 DAP2 Dipeptidyl aminop 98.7 1.8E-07 4E-12 101.0 13.9 130 46-215 375-508 (620)
45 KOG4178 Soluble epoxide hydrol 98.7 1.1E-06 2.3E-11 85.1 16.9 115 35-192 23-137 (322)
46 PLN02511 hydrolase 98.6 6.9E-07 1.5E-11 91.2 15.9 116 37-186 74-191 (388)
47 TIGR01607 PST-A Plasmodium sub 98.5 3.7E-06 7.9E-11 84.0 16.0 61 344-431 270-331 (332)
48 PF00561 Abhydrolase_1: alpha/ 98.4 7.3E-07 1.6E-11 82.7 8.4 55 344-427 175-229 (230)
49 COG2267 PldB Lysophospholipase 98.4 2.8E-05 6.1E-10 76.4 19.3 135 36-217 11-145 (298)
50 KOG1455 Lysophospholipase [Lip 98.4 5.9E-05 1.3E-09 72.3 19.9 265 46-433 37-312 (313)
51 KOG1454 Predicted hydrolase/ac 98.4 5E-06 1.1E-10 82.7 12.7 60 344-432 264-323 (326)
52 TIGR01392 homoserO_Ac_trn homo 98.3 4.2E-05 9.1E-10 76.9 19.5 63 344-431 288-351 (351)
53 PLN02211 methyl indole-3-aceta 98.3 7.6E-06 1.7E-10 79.4 12.2 58 344-431 211-268 (273)
54 PRK05077 frsA fermentation/res 98.3 2.9E-05 6.2E-10 80.0 16.2 79 118-215 223-301 (414)
55 PRK05855 short chain dehydroge 98.3 4.6E-05 1E-09 81.5 18.5 98 46-183 12-109 (582)
56 PRK06765 homoserine O-acetyltr 98.2 0.00021 4.5E-09 72.9 21.2 64 344-432 323-387 (389)
57 PLN02872 triacylglycerol lipas 98.2 0.0001 2.2E-09 75.3 18.7 60 344-431 325-387 (395)
58 PRK10566 esterase; Provisional 98.2 3.8E-05 8.2E-10 73.0 14.4 60 345-431 187-246 (249)
59 KOG2564 Predicted acetyltransf 98.2 2.2E-05 4.8E-10 74.0 12.0 108 66-213 73-181 (343)
60 PRK10985 putative hydrolase; P 98.2 0.00017 3.6E-09 71.8 19.1 46 344-418 255-300 (324)
61 COG0596 MhpC Predicted hydrola 98.0 8.3E-05 1.8E-09 68.8 12.8 59 344-430 221-279 (282)
62 TIGR03100 hydr1_PEP hydrolase, 98.0 0.00014 3.1E-09 70.5 14.6 78 118-215 58-135 (274)
63 PF00326 Peptidase_S9: Prolyl 97.9 5.3E-05 1.2E-09 70.4 9.7 91 116-218 13-103 (213)
64 PF10340 DUF2424: Protein of u 97.8 4E-05 8.6E-10 76.5 5.9 134 48-217 105-238 (374)
65 KOG2382 Predicted alpha/beta h 97.4 0.0018 4E-08 63.0 11.7 96 63-189 48-143 (315)
66 TIGR01838 PHA_synth_I poly(R)- 97.4 0.0066 1.4E-07 64.2 16.5 82 118-216 221-304 (532)
67 PRK10115 protease 2; Provision 97.3 0.0013 2.9E-08 72.0 11.0 135 46-218 426-563 (686)
68 PRK11071 esterase YqiA; Provis 97.2 0.0074 1.6E-07 55.2 12.5 53 345-431 137-189 (190)
69 PRK05371 x-prolyl-dipeptidyl a 97.1 0.0045 9.7E-08 68.5 12.8 84 116-216 278-375 (767)
70 KOG2100 Dipeptidyl aminopeptid 97.1 0.0034 7.4E-08 69.3 11.8 62 345-431 683-745 (755)
71 TIGR01836 PHA_synth_III_C poly 97.1 0.02 4.4E-07 57.5 16.1 61 344-432 286-349 (350)
72 TIGR03101 hydr2_PEP hydrolase, 97.1 0.0033 7.2E-08 60.6 9.9 128 46-221 9-141 (266)
73 TIGR02821 fghA_ester_D S-formy 97.1 0.0048 1E-07 59.8 11.0 50 345-419 212-262 (275)
74 PF12695 Abhydrolase_5: Alpha/ 97.1 0.0016 3.6E-08 55.8 6.9 40 346-413 106-145 (145)
75 COG3509 LpqC Poly(3-hydroxybut 97.0 0.0088 1.9E-07 57.4 11.4 125 46-214 44-179 (312)
76 PLN02442 S-formylglutathione h 96.9 0.0051 1.1E-07 60.0 9.2 56 147-216 125-180 (283)
77 TIGR01840 esterase_phb esteras 96.9 0.0037 8E-08 58.1 7.8 28 346-373 170-197 (212)
78 PRK13604 luxD acyl transferase 96.8 0.033 7.1E-07 54.6 14.4 46 344-416 202-247 (307)
79 KOG1515 Arylacetamide deacetyl 96.7 0.012 2.6E-07 58.6 10.7 144 39-216 64-209 (336)
80 cd00707 Pancreat_lipase_like P 96.7 0.0016 3.5E-08 63.2 4.0 82 116-213 65-146 (275)
81 TIGR00976 /NonD putative hydro 96.3 0.0092 2E-07 63.9 7.1 128 46-216 6-134 (550)
82 PF08386 Abhydrolase_4: TAP-li 96.1 0.022 4.7E-07 46.6 7.0 63 345-436 35-97 (103)
83 PRK10162 acetyl esterase; Prov 95.9 0.017 3.8E-07 57.2 6.9 46 166-216 152-197 (318)
84 PF03583 LIP: Secretory lipase 95.9 0.22 4.8E-06 48.8 14.1 66 344-434 219-286 (290)
85 PF07519 Tannase: Tannase and 95.7 0.59 1.3E-05 49.0 17.4 83 336-435 344-429 (474)
86 PF00975 Thioesterase: Thioest 95.5 0.052 1.1E-06 50.6 8.0 102 69-214 2-104 (229)
87 TIGR03230 lipo_lipase lipoprot 95.4 0.097 2.1E-06 54.0 10.1 68 117-189 73-140 (442)
88 COG3208 GrsT Predicted thioest 95.4 0.12 2.6E-06 48.6 9.4 64 119-192 35-98 (244)
89 PLN00021 chlorophyllase 95.3 0.14 3.1E-06 50.7 10.3 61 148-214 102-166 (313)
90 PF10503 Esterase_phd: Esteras 95.0 0.093 2E-06 49.1 7.8 40 164-214 93-132 (220)
91 KOG1838 Alpha/beta hydrolase [ 94.6 0.51 1.1E-05 47.9 12.2 109 64-214 122-236 (409)
92 PF06500 DUF1100: Alpha/beta h 94.6 0.012 2.6E-07 59.7 0.7 79 118-215 219-297 (411)
93 PF10230 DUF2305: Uncharacteri 94.6 0.27 5.9E-06 47.4 10.1 116 67-214 2-122 (266)
94 KOG4391 Predicted alpha/beta h 94.3 0.08 1.7E-06 48.7 5.3 121 46-215 64-185 (300)
95 COG1647 Esterase/lipase [Gener 94.2 0.78 1.7E-05 42.6 11.3 60 345-431 182-242 (243)
96 PRK11460 putative hydrolase; P 94.0 0.21 4.6E-06 47.1 7.8 62 345-431 149-210 (232)
97 PF03096 Ndr: Ndr family; Int 94.0 0.71 1.5E-05 44.7 11.4 63 345-436 220-282 (283)
98 KOG2931 Differentiation-relate 93.9 1.8 3.8E-05 41.9 13.5 37 402-438 275-311 (326)
99 KOG2281 Dipeptidyl aminopeptid 93.2 0.31 6.8E-06 51.5 7.9 117 64-218 639-766 (867)
100 COG4099 Predicted peptidase [G 93.2 1.6 3.5E-05 42.3 12.0 121 45-191 170-292 (387)
101 cd00312 Esterase_lipase Estera 92.9 0.25 5.5E-06 51.9 7.1 37 149-186 158-194 (493)
102 KOG2984 Predicted hydrolase [G 92.8 0.21 4.6E-06 45.5 5.3 60 344-432 216-275 (277)
103 COG0657 Aes Esterase/lipase [L 92.2 1.7 3.8E-05 42.6 11.6 47 165-218 149-195 (312)
104 PRK11460 putative hydrolase; P 91.5 0.28 6.1E-06 46.2 4.9 37 150-187 86-122 (232)
105 PF05728 UPF0227: Uncharacteri 91.1 0.45 9.8E-06 43.4 5.6 50 155-221 49-98 (187)
106 PF02129 Peptidase_S15: X-Pro 91.0 0.15 3.2E-06 49.3 2.4 82 118-217 58-139 (272)
107 PF05577 Peptidase_S28: Serine 90.8 0.57 1.2E-05 48.5 6.8 95 119-225 61-159 (434)
108 PF02230 Abhydrolase_2: Phosph 90.5 0.68 1.5E-05 42.9 6.4 58 345-431 156-213 (216)
109 PLN02454 triacylglycerol lipas 89.1 1 2.2E-05 45.9 6.7 69 143-215 204-272 (414)
110 KOG4667 Predicted esterase [Li 88.8 3.7 8E-05 38.1 9.3 49 344-421 199-247 (269)
111 PF06057 VirJ: Bacterial virul 88.2 0.81 1.8E-05 41.6 4.7 62 142-213 45-106 (192)
112 PF07859 Abhydrolase_3: alpha/ 88.1 0.83 1.8E-05 41.8 5.0 65 144-216 45-112 (211)
113 PRK10252 entF enterobactin syn 87.5 3.1 6.6E-05 49.3 10.5 102 67-212 1068-1169(1296)
114 COG0400 Predicted esterase [Ge 87.1 0.71 1.5E-05 42.8 3.8 59 344-432 146-204 (207)
115 PF02230 Abhydrolase_2: Phosph 87.0 0.63 1.4E-05 43.1 3.5 57 147-216 86-142 (216)
116 TIGR03502 lipase_Pla1_cef extr 86.7 2.4 5.3E-05 47.0 8.2 44 143-187 521-574 (792)
117 PRK04940 hypothetical protein; 86.2 2.9 6.4E-05 37.7 7.2 61 144-221 39-99 (180)
118 PRK10439 enterobactin/ferric e 84.5 5.9 0.00013 40.8 9.5 36 167-213 287-322 (411)
119 PF00151 Lipase: Lipase; Inte 83.9 0.29 6.4E-06 48.8 -0.3 71 116-191 103-173 (331)
120 PF01764 Lipase_3: Lipase (cla 83.8 1.8 3.9E-05 36.7 4.6 62 146-214 45-106 (140)
121 PF11144 DUF2920: Protein of u 83.6 2.2 4.8E-05 43.3 5.7 60 147-217 162-222 (403)
122 COG2272 PnbA Carboxylesterase 83.2 3.1 6.8E-05 43.1 6.7 99 64-185 91-197 (491)
123 cd00741 Lipase Lipase. Lipase 83.2 1.9 4.1E-05 37.5 4.6 44 146-192 9-52 (153)
124 cd00519 Lipase_3 Lipase (class 83.1 2.7 5.9E-05 39.3 5.9 59 148-215 111-169 (229)
125 PF03283 PAE: Pectinacetyleste 82.7 2.9 6.4E-05 42.2 6.3 139 46-192 34-180 (361)
126 COG0400 Predicted esterase [Ge 82.5 4.6 9.9E-05 37.4 7.0 78 126-215 58-135 (207)
127 KOG2183 Prolylcarboxypeptidase 82.4 1.6 3.6E-05 44.0 4.2 64 118-183 112-182 (492)
128 PLN02571 triacylglycerol lipas 81.6 4.5 9.7E-05 41.4 7.0 70 145-215 204-276 (413)
129 PF11288 DUF3089: Protein of u 81.5 1.9 4.1E-05 39.8 4.0 42 146-189 75-116 (207)
130 KOG3975 Uncharacterized conser 80.9 12 0.00025 35.7 8.8 40 145-193 92-131 (301)
131 PF05677 DUF818: Chlamydia CHL 80.2 5.8 0.00013 39.4 7.0 58 116-181 170-228 (365)
132 smart00824 PKS_TE Thioesterase 80.0 7.9 0.00017 34.5 7.7 76 117-212 25-100 (212)
133 COG4757 Predicted alpha/beta h 79.3 3.7 8.1E-05 38.5 5.1 64 118-185 58-122 (281)
134 PF10081 Abhydrolase_9: Alpha/ 79.0 4 8.7E-05 39.4 5.4 38 144-181 85-122 (289)
135 PF08840 BAAT_C: BAAT / Acyl-C 78.8 2.8 6.2E-05 38.9 4.4 47 155-213 9-55 (213)
136 PF06342 DUF1057: Alpha/beta h 78.0 14 0.00029 35.9 8.6 92 336-429 203-295 (297)
137 PF07819 PGAP1: PGAP1-like pro 75.6 8.6 0.00019 36.0 6.7 65 145-217 60-127 (225)
138 KOG1553 Predicted alpha/beta h 74.9 16 0.00035 36.3 8.3 107 64-215 240-346 (517)
139 KOG3101 Esterase D [General fu 74.4 54 0.0012 30.5 11.0 138 31-183 6-156 (283)
140 TIGR03712 acc_sec_asp2 accesso 74.0 11 0.00024 39.1 7.4 115 46-216 275-392 (511)
141 COG0627 Predicted esterase [Ge 73.8 6.5 0.00014 38.9 5.5 117 66-191 52-175 (316)
142 KOG1552 Predicted alpha/beta h 73.7 4.6 0.0001 38.4 4.2 58 345-431 193-250 (258)
143 PLN02733 phosphatidylcholine-s 73.1 5.5 0.00012 41.4 5.0 41 144-187 141-181 (440)
144 PF05990 DUF900: Alpha/beta hy 72.6 7.1 0.00015 36.8 5.3 67 146-217 74-140 (233)
145 PF12146 Hydrolase_4: Putative 72.4 18 0.00038 27.8 6.6 78 47-156 2-79 (79)
146 PLN02719 triacylglycerol lipas 72.3 10 0.00023 39.7 6.7 71 145-215 273-346 (518)
147 COG3319 Thioesterase domains o 72.0 31 0.00068 33.0 9.6 89 68-193 1-90 (257)
148 PRK14567 triosephosphate isome 71.9 9.4 0.0002 36.5 5.9 61 145-217 178-238 (253)
149 COG0429 Predicted hydrolase of 71.8 43 0.00093 33.3 10.4 120 46-213 60-185 (345)
150 PRK14566 triosephosphate isome 71.2 9.2 0.0002 36.7 5.7 60 146-217 189-248 (260)
151 KOG1516 Carboxylesterase and r 69.7 18 0.00039 38.5 8.3 33 153-186 181-213 (545)
152 PLN02753 triacylglycerol lipas 69.4 7.7 0.00017 40.8 5.1 73 143-215 285-360 (531)
153 COG5510 Predicted small secret 68.7 2.2 4.8E-05 28.6 0.7 22 1-22 2-23 (44)
154 PLN02324 triacylglycerol lipas 67.2 9.8 0.00021 39.0 5.2 49 143-192 191-239 (415)
155 PF11187 DUF2974: Protein of u 67.0 10 0.00022 35.6 5.0 37 152-192 72-108 (224)
156 PLN02408 phospholipase A1 64.4 10 0.00022 38.3 4.7 46 146-192 179-224 (365)
157 PF05057 DUF676: Putative seri 63.7 13 0.00028 34.6 5.0 49 143-192 54-102 (217)
158 PRK10299 PhoPQ regulatory prot 62.7 5.8 0.00013 27.0 1.8 9 1-9 1-9 (47)
159 PF08538 DUF1749: Protein of u 62.6 25 0.00053 34.5 6.8 69 143-218 82-152 (303)
160 PF08237 PE-PPE: PE-PPE domain 62.6 29 0.00062 32.6 7.1 66 140-214 25-90 (225)
161 PRK07868 acyl-CoA synthetase; 61.9 10 0.00022 43.8 4.8 64 344-436 297-364 (994)
162 PF05448 AXE1: Acetyl xylan es 60.6 16 0.00035 36.2 5.4 139 46-214 66-209 (320)
163 PLN02310 triacylglycerol lipas 60.4 20 0.00043 36.7 6.0 64 146-215 186-250 (405)
164 PLN02429 triosephosphate isome 60.3 19 0.00042 35.5 5.7 69 127-217 230-299 (315)
165 COG1073 Hydrolases of the alph 59.6 21 0.00044 33.7 5.9 61 345-432 233-296 (299)
166 PLN02761 lipase class 3 family 58.3 16 0.00035 38.4 5.0 72 144-215 267-343 (527)
167 PLN00413 triacylglycerol lipas 57.5 11 0.00024 39.1 3.7 39 150-191 269-307 (479)
168 PLN02561 triosephosphate isome 57.0 21 0.00045 34.2 5.2 59 146-216 180-239 (253)
169 PF06821 Ser_hydrolase: Serine 56.7 16 0.00034 32.7 4.2 43 345-417 115-157 (171)
170 PLN02847 triacylglycerol lipas 56.7 19 0.00042 38.5 5.3 65 143-216 225-294 (633)
171 KOG1552 Predicted alpha/beta h 56.3 29 0.00062 33.1 5.9 78 117-217 88-166 (258)
172 PLN02934 triacylglycerol lipas 54.5 17 0.00036 38.2 4.4 39 150-191 306-344 (515)
173 PLN02162 triacylglycerol lipas 54.2 14 0.00031 38.3 3.8 39 150-191 263-301 (475)
174 PLN02802 triacylglycerol lipas 54.2 27 0.00057 36.7 5.8 63 146-214 309-371 (509)
175 cd00311 TIM Triosephosphate is 53.5 33 0.00071 32.6 5.9 59 146-217 176-235 (242)
176 TIGR01839 PHA_synth_II poly(R) 52.8 3.3E+02 0.007 29.4 15.6 28 344-371 441-468 (560)
177 PLN02442 S-formylglutathione h 52.2 8.4 0.00018 37.4 1.8 47 344-415 217-264 (283)
178 PF05049 IIGP: Interferon-indu 52.1 12 0.00025 38.0 2.8 62 66-131 33-98 (376)
179 PLN03037 lipase class 3 family 51.8 32 0.00069 36.3 5.9 46 147-192 296-342 (525)
180 KOG2182 Hydrolytic enzymes of 51.3 97 0.0021 32.5 9.2 41 143-183 147-187 (514)
181 KOG4627 Kynurenine formamidase 51.2 11 0.00024 34.8 2.1 72 128-215 102-173 (270)
182 PF02450 LCAT: Lecithin:choles 51.1 22 0.00048 36.3 4.7 39 147-189 102-140 (389)
183 COG3117 Uncharacterized protei 50.3 14 0.0003 33.5 2.6 109 1-129 1-123 (188)
184 PTZ00333 triosephosphate isome 50.3 30 0.00065 33.2 5.1 60 145-216 182-242 (255)
185 PF09292 Neil1-DNA_bind: Endon 49.0 10 0.00022 24.6 1.1 12 68-79 25-36 (39)
186 PF07389 DUF1500: Protein of u 48.4 11 0.00025 29.3 1.5 27 149-177 7-33 (100)
187 PRK00042 tpiA triosephosphate 46.9 49 0.0011 31.6 6.0 75 120-217 162-239 (250)
188 PRK13792 lysozyme inhibitor; P 46.2 1.4E+02 0.003 25.4 7.9 26 1-28 1-26 (127)
189 PF03959 FSH1: Serine hydrolas 46.2 18 0.0004 33.3 2.9 48 344-420 161-208 (212)
190 PF07265 TAP35_44: Tapetum spe 46.0 15 0.00032 29.5 1.9 18 1-18 1-21 (119)
191 KOG2551 Phospholipase/carboxyh 45.4 51 0.0011 30.8 5.6 57 344-430 163-221 (230)
192 KOG4569 Predicted lipase [Lipi 44.9 24 0.00052 35.3 3.7 41 150-193 156-196 (336)
193 PRK07868 acyl-CoA synthetase; 44.5 53 0.0012 38.0 6.9 21 167-187 140-160 (994)
194 PF01738 DLH: Dienelactone hyd 44.5 59 0.0013 29.7 6.1 48 344-416 145-192 (218)
195 PRK14565 triosephosphate isome 43.9 49 0.0011 31.3 5.4 53 146-218 174-226 (237)
196 PRK15492 triosephosphate isome 41.3 60 0.0013 31.2 5.7 60 146-218 189-249 (260)
197 KOG3079 Uridylate kinase/adeny 40.8 15 0.00032 33.3 1.3 15 66-80 6-20 (195)
198 COG2945 Predicted hydrolase of 40.7 24 0.00052 32.2 2.6 58 126-191 68-126 (210)
199 PF05448 AXE1: Acetyl xylan es 40.6 32 0.00069 34.1 3.8 52 344-423 262-314 (320)
200 PF08840 BAAT_C: BAAT / Acyl-C 40.5 22 0.00048 32.9 2.6 48 344-414 115-163 (213)
201 PF03403 PAF-AH_p_II: Platelet 39.7 22 0.00049 36.1 2.6 39 168-218 228-266 (379)
202 COG2021 MET2 Homoserine acetyl 39.6 4.2E+02 0.0091 26.8 13.8 62 344-432 306-367 (368)
203 KOG3724 Negative regulator of 39.4 39 0.00084 37.4 4.4 92 70-182 92-196 (973)
204 COG3150 Predicted esterase [Ge 38.9 72 0.0016 28.6 5.2 63 140-223 38-100 (191)
205 PF06259 Abhydrolase_8: Alpha/ 38.7 54 0.0012 29.6 4.6 66 116-188 62-129 (177)
206 PF00756 Esterase: Putative es 38.6 15 0.00033 34.3 1.2 56 147-217 98-153 (251)
207 PF06414 Zeta_toxin: Zeta toxi 37.8 28 0.0006 31.7 2.7 34 64-97 11-50 (199)
208 COG4425 Predicted membrane pro 37.4 43 0.00094 34.5 4.1 35 145-179 374-408 (588)
209 PF12740 Chlorophyllase2: Chlo 36.8 80 0.0017 30.3 5.7 41 168-214 91-131 (259)
210 TIGR01849 PHB_depoly_PhaZ poly 36.7 57 0.0012 33.5 5.0 64 344-431 338-404 (406)
211 PRK13962 bifunctional phosphog 36.4 60 0.0013 35.5 5.3 69 127-217 566-635 (645)
212 COG0149 TpiA Triosephosphate i 35.8 1.3E+02 0.0028 28.7 6.9 75 120-218 162-239 (251)
213 PF06821 Ser_hydrolase: Serine 34.1 48 0.001 29.5 3.6 39 167-215 54-92 (171)
214 COG3673 Uncharacterized conser 32.7 46 0.001 32.9 3.4 66 117-187 65-141 (423)
215 KOG3253 Predicted alpha/beta h 32.3 69 0.0015 34.4 4.7 50 340-417 299-349 (784)
216 COG3571 Predicted hydrolase of 32.3 31 0.00066 30.7 1.9 28 164-191 85-112 (213)
217 PF07224 Chlorophyllase: Chlor 31.9 70 0.0015 30.9 4.3 59 146-213 98-156 (307)
218 COG3896 Chloramphenicol 3-O-ph 31.5 31 0.00068 30.5 1.8 26 68-93 23-52 (205)
219 PF03207 OspD: Borrelia outer 31.2 30 0.00065 30.4 1.7 40 1-41 1-42 (254)
220 PF01083 Cutinase: Cutinase; 30.4 35 0.00076 30.7 2.1 81 122-216 44-125 (179)
221 PRK14731 coaE dephospho-CoA ki 30.2 55 0.0012 30.1 3.4 32 66-97 3-36 (208)
222 PF01738 DLH: Dienelactone hyd 29.6 37 0.00079 31.1 2.1 55 145-212 76-130 (218)
223 PF08194 DIM: DIM protein; In 29.6 45 0.00097 21.6 1.8 19 1-20 1-19 (36)
224 TIGR01840 esterase_phb esteras 29.1 39 0.00086 30.8 2.2 52 150-213 78-129 (212)
225 PF00121 TIM: Triosephosphate 29.0 17 0.00037 34.6 -0.2 70 126-217 168-238 (244)
226 PF00681 Plectin: Plectin repe 28.9 33 0.00072 23.2 1.3 32 212-243 12-43 (45)
227 COG5153 CVT17 Putative lipase 28.4 23 0.00049 34.3 0.5 31 155-185 263-293 (425)
228 KOG4540 Putative lipase essent 28.4 23 0.00049 34.3 0.5 31 155-185 263-293 (425)
229 COG3946 VirJ Type IV secretory 27.5 91 0.002 31.9 4.5 46 142-190 303-348 (456)
230 COG2945 Predicted hydrolase of 27.0 87 0.0019 28.7 3.9 55 345-430 150-204 (210)
231 COG3596 Predicted GTPase [Gene 26.1 95 0.0021 30.1 4.2 59 66-133 37-101 (296)
232 PF10609 ParA: ParA/MinD ATPas 25.6 41 0.00088 26.1 1.4 12 119-130 2-13 (81)
233 KOG3877 NADH:ubiquinone oxidor 24.9 98 0.0021 30.1 4.0 51 114-181 67-117 (393)
234 KOG2369 Lecithin:cholesterol a 24.7 64 0.0014 33.5 2.9 76 348-436 377-455 (473)
235 TIGR02821 fghA_ester_D S-formy 24.4 95 0.0021 29.7 4.1 41 165-216 135-175 (275)
236 TIGR00419 tim triosephosphate 24.3 1.3E+02 0.0027 27.9 4.6 70 120-216 133-204 (205)
237 COG3700 AphA Acid phosphatase 24.1 47 0.001 29.9 1.6 23 1-23 1-23 (237)
238 cd00412 pyrophosphatase Inorga 24.0 2.3E+02 0.0051 24.9 6.0 46 143-192 107-152 (155)
239 COG0221 Ppa Inorganic pyrophos 24.0 1.8E+02 0.0039 26.1 5.3 31 106-136 23-53 (171)
240 PRK06762 hypothetical protein; 23.1 47 0.001 28.9 1.5 20 68-87 2-23 (166)
241 PF05436 MF_alpha_N: Mating fa 22.9 1.5E+02 0.0033 23.2 4.0 15 31-45 32-48 (86)
242 TIGR02052 MerP mercuric transp 22.6 42 0.0009 25.2 1.0 20 1-20 1-20 (92)
243 PF06309 Torsin: Torsin; Inte 22.3 69 0.0015 27.2 2.2 15 66-80 51-65 (127)
244 PRK13733 conjugal transfer pro 21.7 81 0.0018 28.1 2.6 24 1-25 1-24 (171)
245 COG0412 Dienelactone hydrolase 21.6 1.4E+02 0.003 28.1 4.4 43 145-188 90-132 (236)
246 PRK14905 triosephosphate isome 21.4 2.1E+02 0.0046 28.9 5.9 60 146-218 190-250 (355)
247 KOG1643 Triosephosphate isomer 21.4 1.5E+02 0.0032 27.4 4.2 83 109-217 151-238 (247)
248 COG4782 Uncharacterized protei 21.0 1.7E+02 0.0037 29.5 5.0 66 147-218 173-238 (377)
249 PRK10949 protease 4; Provision 21.0 72 0.0016 34.8 2.6 56 118-192 115-172 (618)
250 TIGR03598 GTPase_YsxC ribosome 20.7 3.4E+02 0.0074 23.7 6.7 26 63-88 13-40 (179)
251 KOG4389 Acetylcholinesterase/B 20.7 3.8E+02 0.0082 28.4 7.4 58 130-191 180-238 (601)
252 PF07172 GRP: Glycine rich pro 20.5 53 0.0011 26.4 1.1 15 1-15 1-15 (95)
253 COG1770 PtrB Protease II [Amin 20.3 1.4E+02 0.003 32.5 4.4 58 346-425 611-668 (682)
254 PF07859 Abhydrolase_3: alpha/ 20.1 88 0.0019 28.1 2.7 44 345-415 167-210 (211)
255 PF15632 ATPgrasp_Ter: ATP-gra 20.0 2.6E+02 0.0056 27.9 6.1 70 71-174 2-73 (329)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=8.8e-103 Score=786.38 Aligned_cols=388 Identities=34% Similarity=0.582 Sum_probs=334.4
Q ss_pred CCCCceeeeeecCCCCCceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCccccccccccc
Q 012982 30 EALPTKSGYLPVNPATGSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKP 109 (452)
Q Consensus 30 ~~~~~~sGyl~v~~~~~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~ 109 (452)
..+++|||||+|++..+++|||||+||+. +|+++||||||||||||||+.|+|.|+||++++.++. +|..
T Consensus 40 ~~f~~ysGYv~v~~~~~~~LFYwf~eS~~----~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~------tL~~ 109 (454)
T KOG1282|consen 40 LPFKQYSGYVTVNESEGRQLFYWFFESEN----NPETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGK------TLYL 109 (454)
T ss_pred CCcccccceEECCCCCCceEEEEEEEccC----CCCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCC------ccee
Confidence 35789999999998889999999999986 6889999999999999999999999999999998775 8999
Q ss_pred CCCCcccccceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHH
Q 012982 110 NPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFI 189 (452)
Q Consensus 110 N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i 189 (452)
|+||||+.||||||||||||||||++++.++.++++++|+|+++||++||++||+|++++|||+||||||||||+||.+|
T Consensus 110 N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I 189 (454)
T KOG1282|consen 110 NPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEI 189 (454)
T ss_pred CCccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHH
Confidence 99999999999999999999999999888888899999999999999999999999999999999999999999999999
Q ss_pred HHhcccCCCCceeecceeEecCCCCChhhhhhhhHHHhhhcCCCCHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 012982 190 LKQNKQLPSSKRVNLQGVAIGNGLTDPATQVATHALNAYFSGLINERQKDELEKAQGEAIRLVKMGNWSEATNARNELLD 269 (452)
Q Consensus 190 ~~~n~~~~~~~~inLkGi~igng~~~p~~q~~~~~~~a~~~gli~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 269 (452)
++.|+.. ..+.|||||++||||++|+..+..++.+|++.||+|+++.++.+++.|..+...+.... .....|..+.+
T Consensus 190 ~~~N~~~-~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~--~~~~~C~~~~~ 266 (454)
T KOG1282|consen 190 LKGNKKC-CKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVD--PSNTKCNKAVE 266 (454)
T ss_pred Hhccccc-cCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccC--CchhHHHHHHH
Confidence 9998642 34679999999999999999999999999999999999999999997665543111111 12445666665
Q ss_pred HHH-HhcCCCCcccccCC-CCC--------------C---hhHHHhhcCcHHHHHHhCCCCCC--CcccCChHhHHhhhc
Q 012982 270 LLQ-DMTGLATLYDFSKK-VPY--------------P---TELVTRLLRIDEVKKALGAKETI--VFEDCSDVVGEALHA 328 (452)
Q Consensus 270 ~~~-~~~g~~n~Ydi~~~-~~~--------------~---~~~~~~ylN~~~V~~aL~v~~~~--~~~~cs~~v~~~~~~ 328 (452)
.+. ...+..+.|++... |.. + .+...+|||+++||+||||+... .|+.||..|...+.
T Consensus 267 ~~~~~~~~~i~~y~i~~~~C~~~~~~~~~~~~~~~~~~c~~~~~~~ylN~~~VrkALh~~~~~~~~W~~Cn~~v~~~~~- 345 (454)
T KOG1282|consen 267 EFDSKTTGDIDNYYILTPDCYPTSYELKKPTDCYGYDPCLSDYAEKYLNRPEVRKALHANKTSIGKWERCNDEVNYNYN- 345 (454)
T ss_pred HHHHHHhccCchhhhcchhhccccccccccccccccCCchhhhHHHhcCCHHHHHHhCCCCCCCCcccccChhhhcccc-
Confidence 554 44444555554433 321 1 13337899999999999998765 59999999976644
Q ss_pred CccccHHHHHHHHHh-c-eeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeC-CEEeeEEEeeCcEEEE
Q 012982 329 DEMKSVKFMVEFLVR-N-TKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVK-EELAGYVQKWGNLSHV 405 (452)
Q Consensus 329 d~~~~~~~~l~~Ll~-~-irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~-g~~~G~~k~~~~ltf~ 405 (452)
+...++.+.+..++. . +||+||+||.|++||+.|+++|+++|++.. .++++||+++ +|++||+++|++|+|+
T Consensus 346 ~~~~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~L~~~~-----~~~~~pW~~~~~qvaG~~~~Y~~ltf~ 420 (454)
T KOG1282|consen 346 DDIKSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKSLNLSI-----TDEWRPWYHKGGQVAGYTKTYGGLTFA 420 (454)
T ss_pred cCccchHHHHHHHhhcCceEEEEEeCCcceeCcchhhHHHHHhccCcc-----ccCccCCccCCCceeeeEEEecCEEEE
Confidence 344567677777776 5 899999999999999999999999998544 4678999996 8999999999999999
Q ss_pred EEcCCccccCCCCCHHHHHHHHHHHcCCCcc
Q 012982 406 VVLGAGHLVPTDQPLNSQIMIEDWVLDKGLF 436 (452)
Q Consensus 406 ~V~~AGHmvp~dqP~~~~~~i~~fl~~~~~~ 436 (452)
+|+|||||||.|||++++.||++||.|+++.
T Consensus 421 tVrGaGH~VP~~~p~~al~m~~~fl~g~~l~ 451 (454)
T KOG1282|consen 421 TVRGAGHMVPYDKPESALIMFQRFLNGQPLP 451 (454)
T ss_pred EEeCCcccCCCCCcHHHHHHHHHHHcCCCCC
Confidence 9999999999999999999999999999887
No 2
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=5e-97 Score=759.99 Aligned_cols=384 Identities=37% Similarity=0.668 Sum_probs=313.8
Q ss_pred CCCCceeeeeecCCCCCceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCccccccccccc
Q 012982 30 EALPTKSGYLPVNPATGSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKP 109 (452)
Q Consensus 30 ~~~~~~sGyl~v~~~~~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~ 109 (452)
..+++|||||+|+++.+++|||||||+++ +|+++||||||||||||||++|+|+|+|||+++.++ +.+++.
T Consensus 7 ~~~~~~sGyl~~~~~~~~~lfyw~~~s~~----~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~-----~~~l~~ 77 (415)
T PF00450_consen 7 VPFKQYSGYLPVNDNENAHLFYWFFESRN----DPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDG-----PYTLED 77 (415)
T ss_dssp SSSEEEEEEEEECTTTTEEEEEEEEE-SS----GGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTS-----TSEEEE
T ss_pred CCceEEEEEEecCCCCCcEEEEEEEEeCC----CCCCccEEEEecCCceeccccccccccCceEEeecc-----cccccc
Confidence 35678999999997778999999999987 588999999999999999999999999999999442 128999
Q ss_pred CCCCcccccceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHH
Q 012982 110 NPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFI 189 (452)
Q Consensus 110 N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i 189 (452)
||+||++.|||||||||+||||||...+..+..+++++|+++++||++||++||+++.+||||+||||||+|||.+|.+|
T Consensus 78 n~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i 157 (415)
T PF00450_consen 78 NPYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYI 157 (415)
T ss_dssp -TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHH
T ss_pred cccccccccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhh
Confidence 99999999999999999999999998776678899999999999999999999999999999999999999999999999
Q ss_pred HHhcccCCCCceeecceeEecCCCCChhhhhhhhHHHhhhcCCCCHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 012982 190 LKQNKQLPSSKRVNLQGVAIGNGLTDPATQVATHALNAYFSGLINERQKDELEKAQGEAIRLVKMGNWSEATNARNELLD 269 (452)
Q Consensus 190 ~~~n~~~~~~~~inLkGi~igng~~~p~~q~~~~~~~a~~~gli~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 269 (452)
++++.+.. ..+||||||+||||++||..|..++++++|.+|+|++++++.+++.++.+. .+......|.....
T Consensus 158 ~~~~~~~~-~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~------~~~~~~~~c~~~~~ 230 (415)
T PF00450_consen 158 LQQNKKGD-QPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACP------QCQKAITECAAALD 230 (415)
T ss_dssp HHHTCC---STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSH------SSSCCHHHHHHHHH
T ss_pred hhcccccc-ccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccc------cccchhhHHHHHHH
Confidence 99986421 257999999999999999999999999999999999999998887664331 11112233333222
Q ss_pred H------HHHhcCCCCcccccCCC---------------CCChhHHHhhcCcHHHHHHhCCC--CCCCcccCChHh-HHh
Q 012982 270 L------LQDMTGLATLYDFSKKV---------------PYPTELVTRLLRIDEVKKALGAK--ETIVFEDCSDVV-GEA 325 (452)
Q Consensus 270 ~------~~~~~g~~n~Ydi~~~~---------------~~~~~~~~~ylN~~~V~~aL~v~--~~~~~~~cs~~v-~~~ 325 (452)
. +....+..|+||++..| +...+.+..|||+++||++|||+ ....|..|+..| +..
T Consensus 231 ~~~~~~~~~~~~~~~n~Ydi~~~~~~~~~~~~~~~~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~~~~w~~~~~~V~~~~ 310 (415)
T PF00450_consen 231 ELSCQYAISQCNGGINPYDIRQPCYNPSRSSYDNSPSNDPPDDDYLEAYLNRPDVREALHVPVDSNVNWQSCNDAVNFNW 310 (415)
T ss_dssp HHHHHCHHHHHHTTSETTSTTSEETT-SHCTTCCCCTTTTTCHHHHHHHHTSHHHHHHTT-STTTSSS--SB-HHHHHHC
T ss_pred hhhhhcccccccCCcceeeeeccccccccccccccccccccchhhHHHHhccHHHHHhhCCCcccCCcccccCccccccc
Confidence 2 22345678999999887 22357789999999999999996 456999999999 555
Q ss_pred hhcCccccHHHHHHHHHhc-eeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEE
Q 012982 326 LHADEMKSVKFMVEFLVRN-TKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSH 404 (452)
Q Consensus 326 ~~~d~~~~~~~~l~~Ll~~-irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf 404 (452)
...|.+.++...++.||++ +|||||+||.|++||+.|+++|+++|+|++++.|+.++++ .+++++||+|+++||||
T Consensus 311 ~~~d~~~~~~~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~---~~~~~~G~~k~~~~ltf 387 (415)
T PF00450_consen 311 LYDDFMPSSIPDLPELLDNGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRK---VNGQVAGYVKQYGNLTF 387 (415)
T ss_dssp CTCCC-SBCHHHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEE---TTCSEEEEEEEETTEEE
T ss_pred ccccccccchhhhhhhhhccceeEEeccCCCEEEEeccchhhhhccccCccccccccccc---ccccccceeEEeccEEE
Confidence 5678888999999999997 9999999999999999999999999999999988766655 58899999999999999
Q ss_pred EEEcCCccccCCCCCHHHHHHHHHHHcC
Q 012982 405 VVVLGAGHLVPTDQPLNSQIMIEDWVLD 432 (452)
Q Consensus 405 ~~V~~AGHmvp~dqP~~~~~~i~~fl~~ 432 (452)
++|++||||||+|||+++++||++||.|
T Consensus 388 ~~V~~AGHmvP~dqP~~a~~m~~~fl~g 415 (415)
T PF00450_consen 388 VTVRGAGHMVPQDQPEAALQMFRRFLKG 415 (415)
T ss_dssp EEETT--SSHHHHSHHHHHHHHHHHHCT
T ss_pred EEEcCCcccChhhCHHHHHHHHHHHhcC
Confidence 9999999999999999999999999976
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=7.5e-95 Score=737.12 Aligned_cols=395 Identities=23% Similarity=0.466 Sum_probs=329.2
Q ss_pred CCCCCCCCC--C--CCCceeeeeecCCCCCceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhhhhcccCeEEcc
Q 012982 21 PSSSSLLPK--E--ALPTKSGYLPVNPATGSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTL 96 (452)
Q Consensus 21 ~~~~~~~~~--~--~~~~~sGyl~v~~~~~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~ 96 (452)
+..+..+|+ + +++++|||++|+++.++++||||||+++ +|+++||+|||||||||||+.|+|.|+|||+++.
T Consensus 20 ~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~----~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~ 95 (433)
T PLN03016 20 ASIVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSEN----NPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKF 95 (433)
T ss_pred cCeeecCcCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCC----CcccCCEEEEEcCCCcHHHHHHHHHhcCCceeec
Confidence 344466775 2 4577999999987667899999999986 5889999999999999999999999999999975
Q ss_pred CCcccccccccccCCCCcccccceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEecc
Q 012982 97 SQRQNAEQLSLKPNPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGES 176 (452)
Q Consensus 97 ~~~~~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GES 176 (452)
+... ....++++|++||++.|||||||||+||||||+.++.... ++++.|+++++||++||++||+|+++|+||+|||
T Consensus 96 ~~~~-~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~-~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GES 173 (433)
T PLN03016 96 EVFN-GSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKT-GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDS 173 (433)
T ss_pred cccC-CCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCcc-CCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccC
Confidence 4111 1123799999999999999999999999999987654443 4445669999999999999999999999999999
Q ss_pred CCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCChhhhhhhhHHHhhhcCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 012982 177 YAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDPATQVATHALNAYFSGLINERQKDELEKAQGEAIRLVKMGN 256 (452)
Q Consensus 177 YgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p~~q~~~~~~~a~~~gli~~~~~~~~~~~~~~~~~~~~~~~ 256 (452)
|||+|||.+|.+|+++|.+ ....+||||||+||||+++|..|..++.+++|.+|||++++++.+++.|..+...
T Consensus 174 YaG~yvP~la~~i~~~n~~-~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~----- 247 (433)
T PLN03016 174 YSGMIVPALVQEISQGNYI-CCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYN----- 247 (433)
T ss_pred ccceehHHHHHHHHhhccc-ccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhcccccc-----
Confidence 9999999999999998753 2345799999999999999999999999999999999999999988765432211
Q ss_pred chhHHHHHHHHHHHHHHhcCCCCcccccCC-CCC-----------ChhHHHhhcCcHHHHHHhCCCC--CCCcccCChHh
Q 012982 257 WSEATNARNELLDLLQDMTGLATLYDFSKK-VPY-----------PTELVTRLLRIDEVKKALGAKE--TIVFEDCSDVV 322 (452)
Q Consensus 257 ~~~a~~~~~~~~~~~~~~~g~~n~Ydi~~~-~~~-----------~~~~~~~ylN~~~V~~aL~v~~--~~~~~~cs~~v 322 (452)
...+...|..+...+...++..+.||+..+ |.. +...++.|||+++||++|||+. ...|..|+..|
T Consensus 248 ~~~~~~~C~~~~~~~~~~~~~~n~yni~~~~~~~~~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~cn~~v 327 (433)
T PLN03016 248 VDPSNTQCLKLTEEYHKCTAKINIHHILTPDCDVTNVTSPDCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNRTI 327 (433)
T ss_pred CCCchHHHHHHHHHHHHHhcCCChhhccCCcccccccCCCcccccchHHHHHHhCCHHHHHHhCCCCCCCCCCccCCccc
Confidence 112345577766666666777788888743 311 1245789999999999999975 35899999988
Q ss_pred HHhhhcCccccHHHHHHHHHhceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCc-
Q 012982 323 GEALHADEMKSVKFMVEFLVRNTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGN- 401 (452)
Q Consensus 323 ~~~~~~d~~~~~~~~l~~Ll~~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~- 401 (452)
. +..|...++...++.+++++|||||+||.|++||+.|+++|+++|+|+++.. |++|.++++++||+|++++
T Consensus 328 ~--~~~d~~~~~~~~~~~l~~~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~-----~~~w~~~~~~~G~vk~y~n~ 400 (433)
T PLN03016 328 P--YNHDIVSSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHN-----WRPWMINNQIAGYTRAYSNK 400 (433)
T ss_pred c--cccccchhhHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhCCCCCCCC-----cccccCCCEeeeEEEEeCCc
Confidence 6 5556655555556555557999999999999999999999999999999864 6799999999999999975
Q ss_pred EEEEEEcCCccccCCCCCHHHHHHHHHHHcCCCc
Q 012982 402 LSHVVVLGAGHLVPTDQPLNSQIMIEDWVLDKGL 435 (452)
Q Consensus 402 ltf~~V~~AGHmvp~dqP~~~~~~i~~fl~~~~~ 435 (452)
|||++|++|||||| +||+++++||++|+.|+.+
T Consensus 401 ltfv~V~~AGHmVp-~qP~~al~m~~~Fi~~~~l 433 (433)
T PLN03016 401 MTFATIKAGGHTAE-YRPNETFIMFQRWISGQPL 433 (433)
T ss_pred eEEEEEcCCCCCCC-CCHHHHHHHHHHHHcCCCC
Confidence 99999999999998 7999999999999988754
No 4
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=3.5e-94 Score=740.98 Aligned_cols=392 Identities=29% Similarity=0.502 Sum_probs=349.3
Q ss_pred CCCCCceeeeeecCC-CCCceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCccccccccc
Q 012982 29 KEALPTKSGYLPVNP-ATGSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSL 107 (452)
Q Consensus 29 ~~~~~~~sGyl~v~~-~~~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l 107 (452)
+..+++|||||+|++ ..+.+|||||||+++ +|+++||+|||||||||||+.|+|.|+|||+++.++. ++
T Consensus 42 ~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~----~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~------~~ 111 (462)
T PTZ00472 42 DPSVNQWSGYFDIPGNQTDKHYFYWAFGPRN----GNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTG------DI 111 (462)
T ss_pred CCCCcceeEEEEeCCCCCCceEEEEEEEcCC----CCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCC------ce
Confidence 335688999999975 457899999999986 5889999999999999999999999999999998754 79
Q ss_pred ccCCCCcccccceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHH
Q 012982 108 KPNPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGY 187 (452)
Q Consensus 108 ~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~ 187 (452)
+.|++||++.+||||||||+||||||.... ..+.+++++|+|+++||+.||++||+++++|+||+||||||+|+|.+|.
T Consensus 112 ~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~-~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~ 190 (462)
T PTZ00472 112 YNNTYSWNNEAYVIYVDQPAGVGFSYADKA-DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAY 190 (462)
T ss_pred eECCcccccccCeEEEeCCCCcCcccCCCC-CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHH
Confidence 999999999999999999999999998653 4667889999999999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCceeecceeEecCCCCChhhhhhhhHHHhhh-------cCCCCHHHHHHHHHHHHHHHHHHhcCCc---
Q 012982 188 FILKQNKQLPSSKRVNLQGVAIGNGLTDPATQVATHALNAYF-------SGLINERQKDELEKAQGEAIRLVKMGNW--- 257 (452)
Q Consensus 188 ~i~~~n~~~~~~~~inLkGi~igng~~~p~~q~~~~~~~a~~-------~gli~~~~~~~~~~~~~~~~~~~~~~~~--- 257 (452)
+|+++|+. ..+.+||||||+||||++||..|+.++.+|+|. +|+|++++++++++.++.|++.++.|..
T Consensus 191 ~i~~~n~~-~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~~ 269 (462)
T PTZ00472 191 RINMGNKK-GDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPD 269 (462)
T ss_pred HHHhhccc-cCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccCC
Confidence 99998753 234679999999999999999999999999996 5799999999999988889887766542
Q ss_pred ------hhHHHHHHHHHHHHHHhcCCCCcccccCCCC----CChhHHHhhcCcHHHHHHhCCCCCCCcccCChHhHHhhh
Q 012982 258 ------SEATNARNELLDLLQDMTGLATLYDFSKKVP----YPTELVTRLLRIDEVKKALGAKETIVFEDCSDVVGEALH 327 (452)
Q Consensus 258 ------~~a~~~~~~~~~~~~~~~g~~n~Ydi~~~~~----~~~~~~~~ylN~~~V~~aL~v~~~~~~~~cs~~v~~~~~ 327 (452)
..+...|..+...+. . +..|+||++..|. ++...+..|||+++||++|||+ ...|+.|+..|+..+.
T Consensus 270 ~~~~~c~~a~~~c~~~~~~~~-~-~g~n~Ydi~~~c~~~~c~~~~~~~~yLN~~~Vq~AL~v~-~~~w~~c~~~V~~~~~ 346 (462)
T PTZ00472 270 DADSSCSVARALCNEYIAVYS-A-TGLNNYDIRKPCIGPLCYNMDNTIAFMNREDVQSSLGVK-PATWQSCNMEVNLMFE 346 (462)
T ss_pred CcchHHHHHHHHHHHHHHHHH-h-cCCChhheeccCCCCCccCHHHHHHHhCCHHHHHHhCCC-CCCceeCCHHHHHHhh
Confidence 223344555444332 3 4469999998773 3356789999999999999997 3589999999999999
Q ss_pred cCccccHHHHHHHHHhc-eeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCcee-EeCCEEeeEEEeeC-----
Q 012982 328 ADEMKSVKFMVEFLVRN-TKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVW-KVKEELAGYVQKWG----- 400 (452)
Q Consensus 328 ~d~~~~~~~~l~~Ll~~-irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w-~~~g~~~G~~k~~~----- 400 (452)
.|+++++.+.++.||++ +|||||+||.|++||+.|+++|+++|+|++++.|+++++++| .++++++||+|+++
T Consensus 347 ~D~~~~~~~~l~~LL~~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~ 426 (462)
T PTZ00472 347 MDWMKNFNYTVPGLLEDGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSS 426 (462)
T ss_pred hccccchHHHHHHHHhcCceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCC
Confidence 99999999999999985 999999999999999999999999999999999999999999 57899999999999
Q ss_pred cEEEEEEcCCccccCCCCCHHHHHHHHHHHcCCCc
Q 012982 401 NLSHVVVLGAGHLVPTDQPLNSQIMIEDWVLDKGL 435 (452)
Q Consensus 401 ~ltf~~V~~AGHmvp~dqP~~~~~~i~~fl~~~~~ 435 (452)
+|+|++|++||||||.|||+++++||++|+.|+.+
T Consensus 427 ~l~~~~V~~AGH~vp~d~P~~~~~~i~~fl~~~~~ 461 (462)
T PTZ00472 427 GFSFVQVYNAGHMVPMDQPAVALTMINRFLRNRPL 461 (462)
T ss_pred CeEEEEECCCCccChhhHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999999988754
No 5
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=1.5e-93 Score=727.58 Aligned_cols=392 Identities=25% Similarity=0.453 Sum_probs=316.4
Q ss_pred CCCCCCC----CCCceeeeeecCCCCCceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCc
Q 012982 24 SSLLPKE----ALPTKSGYLPVNPATGSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQR 99 (452)
Q Consensus 24 ~~~~~~~----~~~~~sGyl~v~~~~~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~ 99 (452)
+..+|+- .++++|||++|+++.++++||||||+++ +|+++||+|||||||||||+.|+|+|+|||+++.++.
T Consensus 25 v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~~----~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~ 100 (437)
T PLN02209 25 VKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDK----NPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVY 100 (437)
T ss_pred eecCCCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCC----CCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCC
Confidence 3557753 4668999999987668899999999986 5889999999999999999999999999999987631
Q ss_pred ccccccccccCCCCcccccceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCc
Q 012982 100 QNAEQLSLKPNPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAG 179 (452)
Q Consensus 100 ~~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG 179 (452)
+++..++++|++||++.|||||||||+||||||..++...+ ++++.|+|+++||+.||++||+|+.+|+||+||||||
T Consensus 101 -~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~-~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG 178 (437)
T PLN02209 101 -NGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERT-SDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSG 178 (437)
T ss_pred -CCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCcc-CCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCc
Confidence 12223789999999999999999999999999987654444 4456679999999999999999999999999999999
Q ss_pred cchhHHHHHHHHhcccCCCCceeecceeEecCCCCChhhhhhhhHHHhhhcCCCCHHHHHHHHHHHHHHHHHHhcCCchh
Q 012982 180 KYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDPATQVATHALNAYFSGLINERQKDELEKAQGEAIRLVKMGNWSE 259 (452)
Q Consensus 180 ~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p~~q~~~~~~~a~~~gli~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (452)
||||.+|.+|+++|.+ ....+||||||+||||++||..|..++.++++.+|+|++++++++++.|..+.. . +..
T Consensus 179 ~yvP~~a~~i~~~~~~-~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~---~--~~~ 252 (437)
T PLN02209 179 MIVPALVHEISKGNYI-CCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYF---S--VDP 252 (437)
T ss_pred eehHHHHHHHHhhccc-ccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhcccccc---c--CCC
Confidence 9999999999988753 234579999999999999999999999999999999999999999886543110 0 000
Q ss_pred HHHHHHHHHHHHHHhcCCCCcc-------------cccCCCC-CChhHHHhhcCcHHHHHHhCCCCC--CCcccCChHhH
Q 012982 260 ATNARNELLDLLQDMTGLATLY-------------DFSKKVP-YPTELVTRLLRIDEVKKALGAKET--IVFEDCSDVVG 323 (452)
Q Consensus 260 a~~~~~~~~~~~~~~~g~~n~Y-------------di~~~~~-~~~~~~~~ylN~~~V~~aL~v~~~--~~~~~cs~~v~ 323 (452)
....|...+.......+..+.| +.+..|. ++...+..|||+++||++|||+.. ..|..|+..+
T Consensus 253 ~~~~C~~~i~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~~~~~~- 331 (437)
T PLN02209 253 SNKKCLKLVEEYHKCTDNINSHHTLIANCDDSNTQHISPDCYYYPYHLVECWANNESVREALHVDKGSIGEWIRDHRGI- 331 (437)
T ss_pred ChHHHHHHHHHHHHHhhcCCccccccccccccccccCCCCcccccHHHHHHHhCCHHHHHHhCCCCCCCCCCccccchh-
Confidence 1122322222221222222222 2222231 223468899999999999999743 2799998755
Q ss_pred HhhhcCccccHHHHHHHHHhceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCc-E
Q 012982 324 EALHADEMKSVKFMVEFLVRNTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGN-L 402 (452)
Q Consensus 324 ~~~~~d~~~~~~~~l~~Ll~~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~-l 402 (452)
.+..|.+.++...++.|++++|||||+||.|++||+.|+++|+++|+|++++. |++|+++++++||+|+++| |
T Consensus 332 -~~~~d~~~~~~~~~~~l~~girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~-----~~~w~~~~q~aG~vk~y~n~L 405 (437)
T PLN02209 332 -PYKSDIRSSIPYHMNNSINGYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDD-----WRPWMIKGQIAGYTRTYSNKM 405 (437)
T ss_pred -hcccchhhhHHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhcCCccCCC-----eeeeEECCEeeeEEEEeCCce
Confidence 35567666666666666657999999999999999999999999999999875 5799999999999999996 9
Q ss_pred EEEEEcCCccccCCCCCHHHHHHHHHHHcCCCc
Q 012982 403 SHVVVLGAGHLVPTDQPLNSQIMIEDWVLDKGL 435 (452)
Q Consensus 403 tf~~V~~AGHmvp~dqP~~~~~~i~~fl~~~~~ 435 (452)
||++|++|||||| +||++|++||++|+.++.+
T Consensus 406 tfv~V~~AGHmVp-~qP~~al~m~~~fi~~~~l 437 (437)
T PLN02209 406 TFATVKGGGHTAE-YLPEESSIMFQRWISGQPL 437 (437)
T ss_pred EEEEEcCCCCCcC-cCHHHHHHHHHHHHcCCCC
Confidence 9999999999998 7999999999999988754
No 6
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=5.5e-70 Score=538.43 Aligned_cols=304 Identities=22% Similarity=0.424 Sum_probs=252.6
Q ss_pred ccceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccC
Q 012982 117 IFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQL 196 (452)
Q Consensus 117 ~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~ 196 (452)
.|||||||||+||||||+.++...+ +++++|+|+++||++||++||+|+++||||+||||||||||++|.+|+++|.+
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~~-~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~- 78 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDKT-GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYI- 78 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCcc-ccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhccc-
Confidence 4899999999999999987654444 44556699999999999999999999999999999999999999999988753
Q ss_pred CCCceeecceeEecCCCCChhhhhhhhHHHhhhcCCCCHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhcC
Q 012982 197 PSSKRVNLQGVAIGNGLTDPATQVATHALNAYFSGLINERQKDELEKAQGEAIRLVKMGNWSEATNARNELLDLLQDMTG 276 (452)
Q Consensus 197 ~~~~~inLkGi~igng~~~p~~q~~~~~~~a~~~gli~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g 276 (452)
....+||||||+||||+++|..|..++.+++|.+|+|++++++.+++.|..+.. ....+...|..+...+...++
T Consensus 79 ~~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~-----~~~~~~~~c~~~~~~~~~~~~ 153 (319)
T PLN02213 79 CCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYY-----NVDPSNTQCLKLTEEYHKCTA 153 (319)
T ss_pred ccCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCcc-----CCCCCcHHHHHHHHHHHHHHh
Confidence 234579999999999999999999999999999999999999988875432211 011234457666665555666
Q ss_pred CCCcccccCC-CCC-----------ChhHHHhhcCcHHHHHHhCCCC--CCCcccCChHhHHhhhcCccccHHHHHHHHH
Q 012982 277 LATLYDFSKK-VPY-----------PTELVTRLLRIDEVKKALGAKE--TIVFEDCSDVVGEALHADEMKSVKFMVEFLV 342 (452)
Q Consensus 277 ~~n~Ydi~~~-~~~-----------~~~~~~~ylN~~~V~~aL~v~~--~~~~~~cs~~v~~~~~~d~~~~~~~~l~~Ll 342 (452)
..+.||++.. |.. +...+..|||+++||++|||+. +..|..|+..|. +..|...++...++.|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~c~~~v~--~~~d~~~~~~~~~~~l~ 231 (319)
T PLN02213 154 KINIHHILTPDCDVTNVTSPDCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNRTIP--YNHDIVSSIPYHMNNSI 231 (319)
T ss_pred cCCHhhcccCcccCccCCCCCcccchhHHHHHHhCCHHHHHHhCcCCCCCCCCccCCcccc--cccccccchHHHHHHHh
Confidence 6788887743 311 2246899999999999999975 358999999886 55666655555566555
Q ss_pred hceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCc-EEEEEEcCCccccCCCCCHH
Q 012982 343 RNTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGN-LSHVVVLGAGHLVPTDQPLN 421 (452)
Q Consensus 343 ~~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~-ltf~~V~~AGHmvp~dqP~~ 421 (452)
+++|||||+||.|++||+.|+++|+++|+|++++. |++|+++++++||+|++++ |||++|++|||||| +||++
T Consensus 232 ~~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~-----~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~ 305 (319)
T PLN02213 232 SGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHN-----WRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNE 305 (319)
T ss_pred cCceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCC-----CccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHH
Confidence 56999999999999999999999999999998865 6799999999999999986 99999999999998 79999
Q ss_pred HHHHHHHHHcCCCc
Q 012982 422 SQIMIEDWVLDKGL 435 (452)
Q Consensus 422 ~~~~i~~fl~~~~~ 435 (452)
+++||++||.++.+
T Consensus 306 al~m~~~fi~~~~~ 319 (319)
T PLN02213 306 TFIMFQRWISGQPL 319 (319)
T ss_pred HHHHHHHHHcCCCC
Confidence 99999999988753
No 7
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-69 Score=538.94 Aligned_cols=389 Identities=29% Similarity=0.473 Sum_probs=312.7
Q ss_pred ceeeeeecCCCC-----CceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccc
Q 012982 34 TKSGYLPVNPAT-----GSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLK 108 (452)
Q Consensus 34 ~~sGyl~v~~~~-----~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~ 108 (452)
.++|-++|++.. ...+|||+|++++ +|++||+||||||||||||++|+|+|+||.||+.+.. + .-.
T Consensus 67 ~~~G~lpv~~~~g~~d~ed~~ffy~fe~~n----dp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~---P--~~~ 137 (498)
T COG2939 67 ATAGILPVRDYTGYPDAEDFFFFYTFESPN----DPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTS---P--SYP 137 (498)
T ss_pred hhccccchhhccCCcccceeEEEEEecCCC----CCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCC---C--CCC
Confidence 345655554321 2248899999866 6889999999999999999999999999999998731 1 111
Q ss_pred cCCCCcccccceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCC--CEEEEeccCCccchhHHH
Q 012982 109 PNPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNR--PIYITGESYAGKYVPAIG 186 (452)
Q Consensus 109 ~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~--~~yl~GESYgG~yvP~lA 186 (452)
.||+||++++||||||||+|||||++ ..++.+.+.+.+.+|++.|++.|++.||++.+. |+||+||||||+|+|.||
T Consensus 138 ~NP~SW~~~adLvFiDqPvGTGfS~a-~~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A 216 (498)
T COG2939 138 DNPGSWLDFADLVFIDQPVGTGFSRA-LGDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFA 216 (498)
T ss_pred CCccccccCCceEEEecCcccCcccc-cccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHH
Confidence 79999999999999999999999997 334567789999999999999999999999777 999999999999999999
Q ss_pred HHHHHhcccCCCCceeecceeEecCC-CCChhhhhhhhHHHhhhcC----CCCHHHHHHHHHHH--HHHHHHHhcCCchh
Q 012982 187 YFILKQNKQLPSSKRVNLQGVAIGNG-LTDPATQVATHALNAYFSG----LINERQKDELEKAQ--GEAIRLVKMGNWSE 259 (452)
Q Consensus 187 ~~i~~~n~~~~~~~~inLkGi~igng-~~~p~~q~~~~~~~a~~~g----li~~~~~~~~~~~~--~~~~~~~~~~~~~~ 259 (452)
..|++++. ...-.+||++++|||| +++|..|+.+|..+|...+ ....+.+.++++.| +.|..+...+.-..
T Consensus 217 ~~L~~~~~--~~~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~ 294 (498)
T COG2939 217 HELLEDNI--ALNGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSG 294 (498)
T ss_pred HHHHHhcc--ccCCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCch
Confidence 99999862 2234589999999999 9999999999999987544 44556666666643 33445554443222
Q ss_pred HHHHHHHHH--------HHHHHhcC--CCCcccccCCCCCC---------hhHHHhhcCcHHHHHHhCCCCCCCcccCCh
Q 012982 260 ATNARNELL--------DLLQDMTG--LATLYDFSKKVPYP---------TELVTRLLRIDEVKKALGAKETIVFEDCSD 320 (452)
Q Consensus 260 a~~~~~~~~--------~~~~~~~g--~~n~Ydi~~~~~~~---------~~~~~~ylN~~~V~~aL~v~~~~~~~~cs~ 320 (452)
....|.... +++. .+| ..|+||++..|.++ .....+|+|.+.++++++... ..|..|+.
T Consensus 295 ~~~~c~~~~~~~~~~~~~~~~-r~~~~~~n~y~~r~~~~d~g~~~~~y~~~~~~ld~~~~~~~~~~~~~~~-d~~~~c~t 372 (498)
T COG2939 295 SLQPCENASAYLTGLMREYVG-RAGGRLLNVYDIREECRDPGLGGSCYDTLSTSLDYFNFDPEQEVNDPEV-DNISGCTT 372 (498)
T ss_pred hhhHHHHHHHHHHhcchhhhc-cccccccccccchhhcCCCCcccccccceeeccccccccchhccccccc-cchhccch
Confidence 333333221 1222 233 47999999887543 245667888778888887643 37999999
Q ss_pred HhHHhh---hcCccccHHHHHHHHHhc-eeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEe--CCEEee
Q 012982 321 VVGEAL---HADEMKSVKFMVEFLVRN-TKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKV--KEELAG 394 (452)
Q Consensus 321 ~v~~~~---~~d~~~~~~~~l~~Ll~~-irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~--~g~~~G 394 (452)
++...| ..++..+....+..++.+ +.++++.|+.|.+||+.|++.|..+|+|.+..+|..+.-.+|.. ..+..|
T Consensus 373 ~a~~~f~~~~~~~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~~~a~~~~Lkw~~~~g~~d~~~~~~~~~~t~e~~~ 452 (498)
T COG2939 373 DAMTDFLTFTGGWAKPSRYLVLNLLVNNVWILLYAGDKDFICNLRGNMALDPKLKWLGASGYFDASTPFFWSRLTLEEMG 452 (498)
T ss_pred HHHHhhhhhcCCcccccHHHHhhhhhcCCceeeeecCchhHhhhhhhcccCCcceEeeecchhhhcCCCcccccchhhcc
Confidence 998877 467777777777777764 99999999999999999999999999999999999988888864 678888
Q ss_pred EEEeeCcEEEEEEcCCccccCCCCCHHHHHHHHHHHcCCCcc
Q 012982 395 YVQKWGNLSHVVVLGAGHLVPTDQPLNSQIMIEDWVLDKGLF 436 (452)
Q Consensus 395 ~~k~~~~ltf~~V~~AGHmvp~dqP~~~~~~i~~fl~~~~~~ 436 (452)
-+++++|++|+.+++||||||.|+|+.+++|++.|+.+...+
T Consensus 453 ~~~s~~n~~~~r~y~aGHMvp~d~P~~~~~~~~~~~~~~~~~ 494 (498)
T COG2939 453 GYKSYRNLTFLRIYEAGHMVPYDRPESSLEMVNLWINGYGAF 494 (498)
T ss_pred cccccCCceEEEEecCcceeecCChHHHHHHHHHHHhhcccc
Confidence 889999999999999999999999999999999999987665
No 8
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.9e-69 Score=502.30 Aligned_cols=377 Identities=31% Similarity=0.498 Sum_probs=338.3
Q ss_pred eeeeeecCCCCCceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhh-hhhhhcccCeEEccCCcccccccccccCCCC
Q 012982 35 KSGYLPVNPATGSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSM-TGNFLELGPWRVTLSQRQNAEQLSLKPNPGS 113 (452)
Q Consensus 35 ~sGyl~v~~~~~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~-~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~S 113 (452)
-+||++|+. ++++|||+|.+.... ...+|+.+||+||||+||. +|+|.|+||... .+++|+.+
T Consensus 4 ~wg~v~vr~--~a~~F~wly~~~~~~---ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~-----------~~~~r~~T 67 (414)
T KOG1283|consen 4 DWGYVDVRT--GAHMFWWLYYATANV---KSERPLALWLQGGPGASSTGFGNFEELGPLDL-----------DGSPRDWT 67 (414)
T ss_pred cccceeeec--CceEEEEEeeecccc---ccCCCeeEEecCCCCCCCcCccchhhcCCccc-----------CCCcCCch
Confidence 489999987 899999999887542 3589999999999999876 799999999966 47889999
Q ss_pred cccccceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhc
Q 012982 114 WNRIFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQN 193 (452)
Q Consensus 114 W~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n 193 (452)
|.+.|||||||.|||+||||.+..+.+.++..++|.|+.+.|+.||..||||+.+||||+-|||||++++.+|..+.+..
T Consensus 68 Wlk~adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aI 147 (414)
T KOG1283|consen 68 WLKDADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAI 147 (414)
T ss_pred hhhhccEEEecCCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHH
Confidence 99999999999999999999998889999999999999999999999999999999999999999999999999998876
Q ss_pred ccCCCCceeecceeEecCCCCChhhhhhhhHHHhhhcCCCCHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHH
Q 012982 194 KQLPSSKRVNLQGVAIGNGLTDPATQVATHALNAYFSGLINERQKDELEKAQGEAIRLVKMGNWSEATNARNELLDLLQD 273 (452)
Q Consensus 194 ~~~~~~~~inLkGi~igng~~~p~~q~~~~~~~a~~~gli~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 273 (452)
+. ++.++|+.||++|+.||+|...+-+...++++.+++|+...+..++..++|...++++.|..++.........+..
T Consensus 148 k~--G~i~~nf~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~~ 225 (414)
T KOG1283|consen 148 KR--GEIKLNFIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLISR 225 (414)
T ss_pred hc--CceeecceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcceee
Confidence 53 4567999999999999999999999999999999999999999999999999999999888887765555555555
Q ss_pred hcCCCCcccccCCCCCC----------------------------hhHHHhhcCcHHHHHHhCCCC-CCCcccCChHhHH
Q 012982 274 MTGLATLYDFSKKVPYP----------------------------TELVTRLLRIDEVKKALGAKE-TIVFEDCSDVVGE 324 (452)
Q Consensus 274 ~~g~~n~Ydi~~~~~~~----------------------------~~~~~~ylN~~~V~~aL~v~~-~~~~~~cs~~v~~ 324 (452)
.+..++.||+..+...+ .+.+.++||.+ ||++|++.+ ++.|-..+.+|+.
T Consensus 226 ~sn~VdfYNil~~t~~d~~~~ss~~~~~~~~~~rrl~~~~~~~~~~D~L~~lM~g~-vrkkLgIip~~~~wGgqsg~vFt 304 (414)
T KOG1283|consen 226 ESNGVDFYNILTKTLGDQYSLSSRAAMTPEEVMRRLLVRFVGDEDRDKLSDLMNGP-VRKKLGIIPGGVKWGGQSGDVFT 304 (414)
T ss_pred cccCcceeeeeccCCCcchhhhhhhhcchHHHHHHHHhccCcchhHHHHHHHhccc-ccccccccCCCCcccCcCCchHH
Confidence 56667888887653211 25577888874 999999975 5699999999999
Q ss_pred hhhcCccccHHHHHHHHHhc-eeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEE
Q 012982 325 ALHADEMKSVKFMVEFLVRN-TKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLS 403 (452)
Q Consensus 325 ~~~~d~~~~~~~~l~~Ll~~-irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~lt 403 (452)
.+..|+|.|+...+.+||++ ++|.||||++|.||++.|+++|+..|+|++.+.|+..+|...+++-..+||.|.|+||.
T Consensus 305 ~lq~dFMKPvi~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~s~~l~gy~ktyknl~ 384 (414)
T KOG1283|consen 305 KLQGDFMKPVISKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITVSRVLEGYEKTYKNLS 384 (414)
T ss_pred HhhhhhcccHHHHHHHHHhCCceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccceeecchhhhhhccce
Confidence 99999999999999999986 99999999999999999999999999999999999998888888778999999999999
Q ss_pred EEEEcCCccccCCCCCHHHHHHHHHHH
Q 012982 404 HVVVLGAGHLVPTDQPLNSQIMIEDWV 430 (452)
Q Consensus 404 f~~V~~AGHmvp~dqP~~~~~~i~~fl 430 (452)
|.+|..||||||.|+|+.+.+|++.+.
T Consensus 385 f~wilraghmvp~Dnp~~a~hmlr~vt 411 (414)
T KOG1283|consen 385 FFWILRAGHMVPADNPAAASHMLRHVT 411 (414)
T ss_pred eEEeecccCcccCCCHHHHhhheeecc
Confidence 999999999999999999999998764
No 9
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.36 E-value=4.8e-11 Score=112.77 Aligned_cols=106 Identities=15% Similarity=0.184 Sum_probs=72.0
Q ss_pred CCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCcccccceeeeecCCCcceeeccCCCCCCCChH
Q 012982 66 QTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQI 145 (452)
Q Consensus 66 ~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~ 145 (452)
+.|+||+++|.+|++..+..+.+ . +.+..+++.+| ..|.|.|..... ...+.+
T Consensus 12 ~~~~iv~lhG~~~~~~~~~~~~~-----------------~-------l~~~~~vi~~D-~~G~G~S~~~~~--~~~~~~ 64 (257)
T TIGR03611 12 DAPVVVLSSGLGGSGSYWAPQLD-----------------V-------LTQRFHVVTYD-HRGTGRSPGELP--PGYSIA 64 (257)
T ss_pred CCCEEEEEcCCCcchhHHHHHHH-----------------H-------HHhccEEEEEc-CCCCCCCCCCCc--ccCCHH
Confidence 57999999999888776643321 1 12347899999 559999953222 223566
Q ss_pred HHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCCh
Q 012982 146 SVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDP 216 (452)
Q Consensus 146 ~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p 216 (452)
+.++++.+++... ...+++|+|+|+||..+..+|.+..+ .++++++.+++..+
T Consensus 65 ~~~~~~~~~i~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~~~-----------~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 65 HMADDVLQLLDAL-------NIERFHFVGHALGGLIGLQLALRYPE-----------RLLSLVLINAWSRP 117 (257)
T ss_pred HHHHHHHHHHHHh-------CCCcEEEEEechhHHHHHHHHHHChH-----------HhHHheeecCCCCC
Confidence 6677776655432 34579999999999888777764432 47788887776543
No 10
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.34 E-value=5e-11 Score=114.37 Aligned_cols=129 Identities=21% Similarity=0.267 Sum_probs=78.1
Q ss_pred eeeeeecCCCCCceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhh-hhhhcccCeEEccCCcccccccccccCCCC
Q 012982 35 KSGYLPVNPATGSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMT-GNFLELGPWRVTLSQRQNAEQLSLKPNPGS 113 (452)
Q Consensus 35 ~sGyl~v~~~~~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~-g~f~e~GP~~i~~~~~~~~~~~~l~~N~~S 113 (452)
..++++++ +..+.|..+.. +...|.+|+++||||+++.+ ..+.+ .+..
T Consensus 3 ~~~~~~~~---~~~~~~~~~~~-------~~~~~~vl~~hG~~g~~~~~~~~~~~-----------------~l~~---- 51 (288)
T TIGR01250 3 IEGIITVD---GGYHLFTKTGG-------EGEKIKLLLLHGGPGMSHEYLENLRE-----------------LLKE---- 51 (288)
T ss_pred ccceecCC---CCeEEEEeccC-------CCCCCeEEEEcCCCCccHHHHHHHHH-----------------HHHh----
Confidence 35666664 34444443322 12357889999999998653 22211 1111
Q ss_pred cccccceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhc
Q 012982 114 WNRIFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQN 193 (452)
Q Consensus 114 W~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n 193 (452)
+..+++.+|.| |.|.|..........+.++.++++..++.. +...+++|+|+|+||..+..+|....
T Consensus 52 --~g~~vi~~d~~-G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~liG~S~Gg~ia~~~a~~~p--- 118 (288)
T TIGR01250 52 --EGREVIMYDQL-GCGYSDQPDDSDELWTIDYFVDELEEVREK-------LGLDKFYLLGHSWGGMLAQEYALKYG--- 118 (288)
T ss_pred --cCCEEEEEcCC-CCCCCCCCCcccccccHHHHHHHHHHHHHH-------cCCCcEEEEEeehHHHHHHHHHHhCc---
Confidence 14789999954 999995322111124566677776554432 22456999999999988877775432
Q ss_pred ccCCCCceeecceeEecCCCCC
Q 012982 194 KQLPSSKRVNLQGVAIGNGLTD 215 (452)
Q Consensus 194 ~~~~~~~~inLkGi~igng~~~ 215 (452)
-.++++++.++...
T Consensus 119 --------~~v~~lvl~~~~~~ 132 (288)
T TIGR01250 119 --------QHLKGLIISSMLDS 132 (288)
T ss_pred --------cccceeeEeccccc
Confidence 25788888877653
No 11
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.28 E-value=2.9e-10 Score=111.26 Aligned_cols=105 Identities=15% Similarity=0.087 Sum_probs=73.8
Q ss_pred CCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCcccccceeeeecCCCcceeeccCCC----CCCC
Q 012982 67 TPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDNPIGAGFSFAATND----EIPR 142 (452)
Q Consensus 67 ~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~~----~~~~ 142 (452)
.|.+|+++|.++++.++-.+.+ . +.+.++++.+| ..|.|.|...... ....
T Consensus 29 ~~~vlllHG~~~~~~~w~~~~~-----------------~-------L~~~~~vi~~D-lpG~G~S~~~~~~~~~~~~~~ 83 (294)
T PLN02824 29 GPALVLVHGFGGNADHWRKNTP-----------------V-------LAKSHRVYAID-LLGYGYSDKPNPRSAPPNSFY 83 (294)
T ss_pred CCeEEEECCCCCChhHHHHHHH-----------------H-------HHhCCeEEEEc-CCCCCCCCCCccccccccccC
Confidence 3789999999999988754432 1 23446899999 5599999643221 1234
Q ss_pred ChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCC
Q 012982 143 DQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLT 214 (452)
Q Consensus 143 ~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~ 214 (452)
+.++.|+++.++|.+. ...+++|+|+|.||..+-.+|.+..+ .++++++.++..
T Consensus 84 ~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p~-----------~v~~lili~~~~ 137 (294)
T PLN02824 84 TFETWGEQLNDFCSDV-------VGDPAFVICNSVGGVVGLQAAVDAPE-----------LVRGVMLINISL 137 (294)
T ss_pred CHHHHHHHHHHHHHHh-------cCCCeEEEEeCHHHHHHHHHHHhChh-----------heeEEEEECCCc
Confidence 6677777777766644 24689999999999887777765443 578888888754
No 12
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.27 E-value=2.8e-10 Score=108.40 Aligned_cols=102 Identities=14% Similarity=0.132 Sum_probs=73.0
Q ss_pred CCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCcccccceeeeecCCCcceeeccCCCCCCCC
Q 012982 64 LSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRD 143 (452)
Q Consensus 64 ~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~ 143 (452)
+.+.|.||+++|.+|.+..+..+.+ . +.+..+++.+|. .|-|.|... ...+
T Consensus 13 ~~~~~~iv~lhG~~~~~~~~~~~~~-----------------~-------l~~~~~vi~~D~-~G~G~s~~~----~~~~ 63 (255)
T PRK10673 13 PHNNSPIVLVHGLFGSLDNLGVLAR-----------------D-------LVNDHDIIQVDM-RNHGLSPRD----PVMN 63 (255)
T ss_pred CCCCCCEEEECCCCCchhHHHHHHH-----------------H-------HhhCCeEEEECC-CCCCCCCCC----CCCC
Confidence 4578999999999998877643321 1 234578999995 599998532 1246
Q ss_pred hHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCC
Q 012982 144 QISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNG 212 (452)
Q Consensus 144 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng 212 (452)
.++.++|+.+++..+ ...+++|+|+|+||..+..+|.+..+ .++++++.+.
T Consensus 64 ~~~~~~d~~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~~~-----------~v~~lvli~~ 114 (255)
T PRK10673 64 YPAMAQDLLDTLDAL-------QIEKATFIGHSMGGKAVMALTALAPD-----------RIDKLVAIDI 114 (255)
T ss_pred HHHHHHHHHHHHHHc-------CCCceEEEEECHHHHHHHHHHHhCHh-----------hcceEEEEec
Confidence 777888888877653 23579999999999988888765433 4778777653
No 13
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.27 E-value=8.1e-10 Score=107.94 Aligned_cols=126 Identities=17% Similarity=0.218 Sum_probs=76.5
Q ss_pred CCCceeeeeecCCCCCceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccC
Q 012982 31 ALPTKSGYLPVNPATGSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPN 110 (452)
Q Consensus 31 ~~~~~sGyl~v~~~~~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N 110 (452)
..+..+.+++++ +..++|. ... +.|.+|.++|.|..+..+-.+.+
T Consensus 11 ~~~~~~~~~~~~---~~~i~y~---~~G-------~~~~iv~lHG~~~~~~~~~~~~~---------------------- 55 (286)
T PRK03204 11 LYPFESRWFDSS---RGRIHYI---DEG-------TGPPILLCHGNPTWSFLYRDIIV---------------------- 55 (286)
T ss_pred cccccceEEEcC---CcEEEEE---ECC-------CCCEEEEECCCCccHHHHHHHHH----------------------
Confidence 344567888884 3456544 222 24778899999866655532210
Q ss_pred CCCcccccceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHH
Q 012982 111 PGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFIL 190 (452)
Q Consensus 111 ~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~ 190 (452)
.+.+..+++-+| ..|.|.|-.. .....+.++.++++.++++. +...+++|+|+|+||..+-.+|..-.
T Consensus 56 --~l~~~~~vi~~D-~~G~G~S~~~--~~~~~~~~~~~~~~~~~~~~-------~~~~~~~lvG~S~Gg~va~~~a~~~p 123 (286)
T PRK03204 56 --ALRDRFRCVAPD-YLGFGLSERP--SGFGYQIDEHARVIGEFVDH-------LGLDRYLSMGQDWGGPISMAVAVERA 123 (286)
T ss_pred --HHhCCcEEEEEC-CCCCCCCCCC--CccccCHHHHHHHHHHHHHH-------hCCCCEEEEEECccHHHHHHHHHhCh
Confidence 123457899999 5599999421 11223455556665554433 23467999999999965544443222
Q ss_pred HhcccCCCCceeecceeEecCCCC
Q 012982 191 KQNKQLPSSKRVNLQGVAIGNGLT 214 (452)
Q Consensus 191 ~~n~~~~~~~~inLkGi~igng~~ 214 (452)
+ .++++++.++..
T Consensus 124 ~-----------~v~~lvl~~~~~ 136 (286)
T PRK03204 124 D-----------RVRGVVLGNTWF 136 (286)
T ss_pred h-----------heeEEEEECccc
Confidence 1 688888877653
No 14
>PHA02857 monoglyceride lipase; Provisional
Probab=99.25 E-value=8.7e-10 Score=106.72 Aligned_cols=123 Identities=15% Similarity=0.160 Sum_probs=81.1
Q ss_pred CceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCccc-ccceeeee
Q 012982 46 GSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNR-IFGLLFID 124 (452)
Q Consensus 46 ~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~-~anllfiD 124 (452)
+..|+|..++... ..+|+||.++|..++|..+-.+.+. +.+ -..++-+|
T Consensus 10 g~~l~~~~~~~~~------~~~~~v~llHG~~~~~~~~~~~~~~------------------------l~~~g~~via~D 59 (276)
T PHA02857 10 NDYIYCKYWKPIT------YPKALVFISHGAGEHSGRYEELAEN------------------------ISSLGILVFSHD 59 (276)
T ss_pred CCEEEEEeccCCC------CCCEEEEEeCCCccccchHHHHHHH------------------------HHhCCCEEEEcc
Confidence 6789998887632 2468999999997777766333211 222 36789999
Q ss_pred cCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeec
Q 012982 125 NPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNL 204 (452)
Q Consensus 125 qPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inL 204 (452)
..|.|.|... .....+.....+|+.+++..+-+. +...+++|+|+|+||..+..+|.+.. -.+
T Consensus 60 -~~G~G~S~~~--~~~~~~~~~~~~d~~~~l~~~~~~---~~~~~~~lvG~S~GG~ia~~~a~~~p-----------~~i 122 (276)
T PHA02857 60 -HIGHGRSNGE--KMMIDDFGVYVRDVVQHVVTIKST---YPGVPVFLLGHSMGATISILAAYKNP-----------NLF 122 (276)
T ss_pred -CCCCCCCCCc--cCCcCCHHHHHHHHHHHHHHHHhh---CCCCCEEEEEcCchHHHHHHHHHhCc-----------ccc
Confidence 6699999432 111234445567777766554443 34678999999999976655553321 158
Q ss_pred ceeEecCCCCC
Q 012982 205 QGVAIGNGLTD 215 (452)
Q Consensus 205 kGi~igng~~~ 215 (452)
+|+++.++.++
T Consensus 123 ~~lil~~p~~~ 133 (276)
T PHA02857 123 TAMILMSPLVN 133 (276)
T ss_pred ceEEEeccccc
Confidence 99999888765
No 15
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.16 E-value=3.4e-09 Score=104.17 Aligned_cols=136 Identities=15% Similarity=0.161 Sum_probs=83.4
Q ss_pred CCCCCCCCCceeeeeecCCCCCc--eEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccc
Q 012982 25 SLLPKEALPTKSGYLPVNPATGS--AIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNA 102 (452)
Q Consensus 25 ~~~~~~~~~~~sGyl~v~~~~~~--~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~ 102 (452)
..+|+. |+.-.|+.|....+. .++|.-. . ++ +.|.||.++|.|+.+..+..+.+
T Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~i~y~~~---G----~~-~~~~lvliHG~~~~~~~w~~~~~-------------- 67 (302)
T PRK00870 12 ENLPDY--PFAPHYVDVDDGDGGPLRMHYVDE---G----PA-DGPPVLLLHGEPSWSYLYRKMIP-------------- 67 (302)
T ss_pred cCCcCC--CCCceeEeecCCCCceEEEEEEec---C----CC-CCCEEEEECCCCCchhhHHHHHH--------------
Confidence 334444 445688998653233 4555532 2 12 45789999999888877643321
Q ss_pred cccccccCCCCcccccceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccch
Q 012982 103 EQLSLKPNPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYV 182 (452)
Q Consensus 103 ~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yv 182 (452)
.+.. +..+++.+| ..|.|.|... +.....+.++.++++.++|.. ....++.|+|+|+||..+
T Consensus 68 ---~L~~------~gy~vi~~D-l~G~G~S~~~-~~~~~~~~~~~a~~l~~~l~~-------l~~~~v~lvGhS~Gg~ia 129 (302)
T PRK00870 68 ---ILAA------AGHRVIAPD-LIGFGRSDKP-TRREDYTYARHVEWMRSWFEQ-------LDLTDVTLVCQDWGGLIG 129 (302)
T ss_pred ---HHHh------CCCEEEEEC-CCCCCCCCCC-CCcccCCHHHHHHHHHHHHHH-------cCCCCEEEEEEChHHHHH
Confidence 1111 247899999 5599999421 111123556666666555442 234589999999999887
Q ss_pred hHHHHHHHHhcccCCCCceeecceeEecCCC
Q 012982 183 PAIGYFILKQNKQLPSSKRVNLQGVAIGNGL 213 (452)
Q Consensus 183 P~lA~~i~~~n~~~~~~~~inLkGi~igng~ 213 (452)
-.+|.+..+ .++++++.++.
T Consensus 130 ~~~a~~~p~-----------~v~~lvl~~~~ 149 (302)
T PRK00870 130 LRLAAEHPD-----------RFARLVVANTG 149 (302)
T ss_pred HHHHHhChh-----------heeEEEEeCCC
Confidence 777754332 57788877653
No 16
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.16 E-value=2.2e-09 Score=107.85 Aligned_cols=125 Identities=14% Similarity=0.214 Sum_probs=80.1
Q ss_pred CceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhh-hhhhcccCeEEccCCcccccccccccCCCCccc-ccceeee
Q 012982 46 GSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMT-GNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNR-IFGLLFI 123 (452)
Q Consensus 46 ~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~-g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~-~anllfi 123 (452)
+..+|+..+...+ .+.+|+||+++|..+.++.+ -.+. + .+.+ -.+++-+
T Consensus 71 g~~l~~~~~~p~~-----~~~~~~iv~lHG~~~~~~~~~~~~~---~---------------------~l~~~g~~v~~~ 121 (349)
T PLN02385 71 GVEIFSKSWLPEN-----SRPKAAVCFCHGYGDTCTFFFEGIA---R---------------------KIASSGYGVFAM 121 (349)
T ss_pred CCEEEEEEEecCC-----CCCCeEEEEECCCCCccchHHHHHH---H---------------------HHHhCCCEEEEe
Confidence 5678887665322 13569999999986654432 1111 0 1222 3679999
Q ss_pred ecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceee
Q 012982 124 DNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVN 203 (452)
Q Consensus 124 DqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~in 203 (452)
|.| |.|.|... .....+.++.++|+.++++.. ...+++...+++|+|+|+||..+..+|.+-.+ .
T Consensus 122 D~~-G~G~S~~~--~~~~~~~~~~~~dv~~~l~~l-~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~-----------~ 186 (349)
T PLN02385 122 DYP-GFGLSEGL--HGYIPSFDDLVDDVIEHYSKI-KGNPEFRGLPSFLFGQSMGGAVALKVHLKQPN-----------A 186 (349)
T ss_pred cCC-CCCCCCCC--CCCcCCHHHHHHHHHHHHHHH-HhccccCCCCEEEEEeccchHHHHHHHHhCcc-----------h
Confidence 965 99999432 223346777888888776654 33335566789999999999766555433211 5
Q ss_pred cceeEecCCCC
Q 012982 204 LQGVAIGNGLT 214 (452)
Q Consensus 204 LkGi~igng~~ 214 (452)
++|+++.++..
T Consensus 187 v~glVLi~p~~ 197 (349)
T PLN02385 187 WDGAILVAPMC 197 (349)
T ss_pred hhheeEecccc
Confidence 78888888754
No 17
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.15 E-value=4.6e-09 Score=104.63 Aligned_cols=137 Identities=15% Similarity=0.165 Sum_probs=85.0
Q ss_pred eeeeeecCCCCCceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCc
Q 012982 35 KSGYLPVNPATGSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSW 114 (452)
Q Consensus 35 ~sGyl~v~~~~~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW 114 (452)
..+++...+ +..++|..+..... ...+|+||+++|..+.++ + .+.+. ...+
T Consensus 33 ~~~~~~~~d--g~~l~~~~~~~~~~----~~~~~~VvllHG~~~~~~-~-~~~~~---------------------~~~L 83 (330)
T PLN02298 33 SKSFFTSPR--GLSLFTRSWLPSSS----SPPRALIFMVHGYGNDIS-W-TFQST---------------------AIFL 83 (330)
T ss_pred ccceEEcCC--CCEEEEEEEecCCC----CCCceEEEEEcCCCCCcc-e-ehhHH---------------------HHHH
Confidence 467777654 67899876653221 125689999999843322 1 00000 0012
Q ss_pred cc-ccceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhc
Q 012982 115 NR-IFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQN 193 (452)
Q Consensus 115 ~~-~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n 193 (452)
.+ -.+|+.+| -.|.|.|... .....+.+..++|+..+++..... .++.+.+++|+|+|+||..+..+|.+ .
T Consensus 84 ~~~Gy~V~~~D-~rGhG~S~~~--~~~~~~~~~~~~D~~~~i~~l~~~-~~~~~~~i~l~GhSmGG~ia~~~a~~----~ 155 (330)
T PLN02298 84 AQMGFACFALD-LEGHGRSEGL--RAYVPNVDLVVEDCLSFFNSVKQR-EEFQGLPRFLYGESMGGAICLLIHLA----N 155 (330)
T ss_pred HhCCCEEEEec-CCCCCCCCCc--cccCCCHHHHHHHHHHHHHHHHhc-ccCCCCCEEEEEecchhHHHHHHHhc----C
Confidence 33 47899999 5599999421 222346677888988877655432 23445689999999999766554432 1
Q ss_pred ccCCCCceeecceeEecCCCCC
Q 012982 194 KQLPSSKRVNLQGVAIGNGLTD 215 (452)
Q Consensus 194 ~~~~~~~~inLkGi~igng~~~ 215 (452)
. -.++|+++.+++..
T Consensus 156 p-------~~v~~lvl~~~~~~ 170 (330)
T PLN02298 156 P-------EGFDGAVLVAPMCK 170 (330)
T ss_pred c-------ccceeEEEeccccc
Confidence 1 15889998887654
No 18
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.11 E-value=4.1e-10 Score=103.48 Aligned_cols=104 Identities=17% Similarity=0.198 Sum_probs=70.2
Q ss_pred EEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCcccccceeeeecCCCcceeeccCCCCCCCChHHHHH
Q 012982 70 LIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQISVAK 149 (452)
Q Consensus 70 ilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~ 149 (452)
||+++|.+|.+..+..+.+ .+ .+..+++.+| ..|.|.|..... ....+.++.++
T Consensus 1 vv~~hG~~~~~~~~~~~~~-----------------~l-------~~~~~v~~~d-~~G~G~s~~~~~-~~~~~~~~~~~ 54 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAE-----------------AL-------ARGYRVIAFD-LPGHGRSDPPPD-YSPYSIEDYAE 54 (228)
T ss_dssp EEEE-STTTTGGGGHHHHH-----------------HH-------HTTSEEEEEE-CTTSTTSSSHSS-GSGGSHHHHHH
T ss_pred eEEECCCCCCHHHHHHHHH-----------------HH-------hCCCEEEEEe-cCCccccccccc-cCCcchhhhhh
Confidence 6899999998876644332 11 1456799999 559999954321 12345666677
Q ss_pred HHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCChh
Q 012982 150 HLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDPA 217 (452)
Q Consensus 150 d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p~ 217 (452)
++.++|+..- ..+++|+|+|+||..+..+|.+..+ .++|+++.++.....
T Consensus 55 ~l~~~l~~~~-------~~~~~lvG~S~Gg~~a~~~a~~~p~-----------~v~~~vl~~~~~~~~ 104 (228)
T PF12697_consen 55 DLAELLDALG-------IKKVILVGHSMGGMIALRLAARYPD-----------RVKGLVLLSPPPPLP 104 (228)
T ss_dssp HHHHHHHHTT-------TSSEEEEEETHHHHHHHHHHHHSGG-----------GEEEEEEESESSSHH
T ss_pred hhhhcccccc-------ccccccccccccccccccccccccc-----------ccccceeeccccccc
Confidence 7666554322 2689999999999877777755322 688999988887653
No 19
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.11 E-value=3.3e-09 Score=101.95 Aligned_cols=106 Identities=23% Similarity=0.164 Sum_probs=70.9
Q ss_pred CCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCcccccceeeeecCCCcceeeccCCCCCCCChH
Q 012982 66 QTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQI 145 (452)
Q Consensus 66 ~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~ 145 (452)
+.|+||+++|.+|.+..+..+.+ .+ .+..+++.+| ..|-|.|..... ...+.+
T Consensus 27 ~~~~vv~~hG~~~~~~~~~~~~~-----------------~l-------~~~~~vi~~D-~~G~G~S~~~~~--~~~~~~ 79 (278)
T TIGR03056 27 AGPLLLLLHGTGASTHSWRDLMP-----------------PL-------ARSFRVVAPD-LPGHGFTRAPFR--FRFTLP 79 (278)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHH-----------------HH-------hhCcEEEeec-CCCCCCCCCccc--cCCCHH
Confidence 45899999999888776533221 11 2237899999 569999953221 234667
Q ss_pred HHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCCh
Q 012982 146 SVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDP 216 (452)
Q Consensus 146 ~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p 216 (452)
..++++.++++.+ ..++++|+|+|+||..+..+|.+.. -.++++++.++...+
T Consensus 80 ~~~~~l~~~i~~~-------~~~~~~lvG~S~Gg~~a~~~a~~~p-----------~~v~~~v~~~~~~~~ 132 (278)
T TIGR03056 80 SMAEDLSALCAAE-------GLSPDGVIGHSAGAAIALRLALDGP-----------VTPRMVVGINAALMP 132 (278)
T ss_pred HHHHHHHHHHHHc-------CCCCceEEEECccHHHHHHHHHhCC-----------cccceEEEEcCcccc
Confidence 7788877766432 2457899999999977666654331 257788888776543
No 20
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.05 E-value=3.7e-08 Score=99.51 Aligned_cols=131 Identities=12% Similarity=0.072 Sum_probs=78.3
Q ss_pred CCceeeeeecCCCCCceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCC
Q 012982 32 LPTKSGYLPVNPATGSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNP 111 (452)
Q Consensus 32 ~~~~sGyl~v~~~~~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~ 111 (452)
.+....++.... ...++|.-..+.. ...+.|.||.++|.++.+..|..+.+ .
T Consensus 59 ~~~~~~~~~~~g--~~~i~Y~~~G~g~----~~~~gp~lvllHG~~~~~~~w~~~~~-----------------~----- 110 (360)
T PLN02679 59 IYERCKKWKWKG--EYSINYLVKGSPE----VTSSGPPVLLVHGFGASIPHWRRNIG-----------------V----- 110 (360)
T ss_pred hhccCceEEECC--ceeEEEEEecCcc----cCCCCCeEEEECCCCCCHHHHHHHHH-----------------H-----
Confidence 333455666632 1266665332110 01134778999999988887743321 0
Q ss_pred CCcccccceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHH-H
Q 012982 112 GSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFI-L 190 (452)
Q Consensus 112 ~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i-~ 190 (452)
..+...++.+|. .|.|.|.... ....+.++.++++.++|... ...+++|+|+|+||..+-.+|... .
T Consensus 111 --L~~~~~via~Dl-~G~G~S~~~~--~~~~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~~P 178 (360)
T PLN02679 111 --LAKNYTVYAIDL-LGFGASDKPP--GFSYTMETWAELILDFLEEV-------VQKPTVLIGNSVGSLACVIAASESTR 178 (360)
T ss_pred --HhcCCEEEEECC-CCCCCCCCCC--CccccHHHHHHHHHHHHHHh-------cCCCeEEEEECHHHHHHHHHHHhcCh
Confidence 123468999995 4999994321 12345667777777766532 245899999999996554444321 1
Q ss_pred HhcccCCCCceeecceeEecCCC
Q 012982 191 KQNKQLPSSKRVNLQGVAIGNGL 213 (452)
Q Consensus 191 ~~n~~~~~~~~inLkGi~igng~ 213 (452)
+ .++|+++.|+.
T Consensus 179 ~-----------rV~~LVLi~~~ 190 (360)
T PLN02679 179 D-----------LVRGLVLLNCA 190 (360)
T ss_pred h-----------hcCEEEEECCc
Confidence 1 57888887764
No 21
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.04 E-value=9.2e-09 Score=100.65 Aligned_cols=104 Identities=17% Similarity=0.159 Sum_probs=72.1
Q ss_pred CCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCcccccceeeeecCCCcceeeccCCCCCCCChHH
Q 012982 67 TPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQIS 146 (452)
Q Consensus 67 ~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~ 146 (452)
.|.+|+++|.|+.+..+-.+.+ . +.+...++-+| ..|-|.|..... ..+...
T Consensus 27 g~~vvllHG~~~~~~~w~~~~~-----------------~-------L~~~~~via~D-~~G~G~S~~~~~---~~~~~~ 78 (295)
T PRK03592 27 GDPIVFLHGNPTSSYLWRNIIP-----------------H-------LAGLGRCLAPD-LIGMGASDKPDI---DYTFAD 78 (295)
T ss_pred CCEEEEECCCCCCHHHHHHHHH-----------------H-------HhhCCEEEEEc-CCCCCCCCCCCC---CCCHHH
Confidence 4789999999999888743321 1 23345899999 559999953221 235666
Q ss_pred HHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCCh
Q 012982 147 VAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDP 216 (452)
Q Consensus 147 ~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p 216 (452)
.|+|+.++++.. ...+++|+|+|.||..+-.+|.+..+ .++++++.++...+
T Consensus 79 ~a~dl~~ll~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~p~-----------~v~~lil~~~~~~~ 130 (295)
T PRK03592 79 HARYLDAWFDAL-------GLDDVVLVGHDWGSALGFDWAARHPD-----------RVRGIAFMEAIVRP 130 (295)
T ss_pred HHHHHHHHHHHh-------CCCCeEEEEECHHHHHHHHHHHhChh-----------heeEEEEECCCCCC
Confidence 677766655542 34689999999999887777765543 58899998875543
No 22
>PLN02578 hydrolase
Probab=99.03 E-value=3.3e-08 Score=99.61 Aligned_cols=100 Identities=17% Similarity=0.180 Sum_probs=66.2
Q ss_pred CEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCcccccceeeeecCCCcceeeccCCCCCCCChHHH
Q 012982 68 PLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQISV 147 (452)
Q Consensus 68 PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~ 147 (452)
|-+|.++|-++.+..+.... | . +.+..+++.+|.| |.|.|... ....+.+..
T Consensus 87 ~~vvliHG~~~~~~~w~~~~---~--------------~-------l~~~~~v~~~D~~-G~G~S~~~---~~~~~~~~~ 138 (354)
T PLN02578 87 LPIVLIHGFGASAFHWRYNI---P--------------E-------LAKKYKVYALDLL-GFGWSDKA---LIEYDAMVW 138 (354)
T ss_pred CeEEEECCCCCCHHHHHHHH---H--------------H-------HhcCCEEEEECCC-CCCCCCCc---ccccCHHHH
Confidence 44688998766655552221 1 1 1345789999965 99998422 122355566
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCC
Q 012982 148 AKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGL 213 (452)
Q Consensus 148 a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~ 213 (452)
++++.+++++.. ..+++|+|+|+||..+..+|.+..+ .++++++.|+.
T Consensus 139 a~~l~~~i~~~~-------~~~~~lvG~S~Gg~ia~~~A~~~p~-----------~v~~lvLv~~~ 186 (354)
T PLN02578 139 RDQVADFVKEVV-------KEPAVLVGNSLGGFTALSTAVGYPE-----------LVAGVALLNSA 186 (354)
T ss_pred HHHHHHHHHHhc-------cCCeEEEEECHHHHHHHHHHHhChH-----------hcceEEEECCC
Confidence 777777666542 4689999999999877777766544 57888887764
No 23
>PRK06489 hypothetical protein; Provisional
Probab=99.03 E-value=3.2e-08 Score=99.92 Aligned_cols=59 Identities=17% Similarity=0.157 Sum_probs=46.8
Q ss_pred ceeEEEEeccCCccCChhhH--HHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCC----ccccCCC
Q 012982 344 NTKVLLYQGHFDLRDGVVST--EAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGA----GHLVPTD 417 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~--~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~A----GHmvp~d 417 (452)
++||||++|+.|.++|.... ++..+.+ ++..+++|.+| ||++. +
T Consensus 292 ~~PvLvI~G~~D~~~p~~~~~~~~la~~i-----------------------------p~a~l~~i~~a~~~~GH~~~-e 341 (360)
T PRK06489 292 KAPVLAINSADDERNPPETGVMEAALKRV-----------------------------KHGRLVLIPASPETRGHGTT-G 341 (360)
T ss_pred CCCEEEEecCCCcccChhhHHHHHHHHhC-----------------------------cCCeEEEECCCCCCCCcccc-c
Confidence 48999999999999987665 4444443 22357899996 99986 8
Q ss_pred CCHHHHHHHHHHHcC
Q 012982 418 QPLNSQIMIEDWVLD 432 (452)
Q Consensus 418 qP~~~~~~i~~fl~~ 432 (452)
+|++..+.|.+|+..
T Consensus 342 ~P~~~~~~i~~FL~~ 356 (360)
T PRK06489 342 SAKFWKAYLAEFLAQ 356 (360)
T ss_pred CHHHHHHHHHHHHHh
Confidence 999999999999963
No 24
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.03 E-value=9.5e-09 Score=99.58 Aligned_cols=117 Identities=15% Similarity=0.129 Sum_probs=75.4
Q ss_pred CceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCcccccceeeeec
Q 012982 46 GSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDN 125 (452)
Q Consensus 46 ~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDq 125 (452)
+..+.|+..+... ..|.||+++|-++.+..+..+.+ .+ .+..+++.+|
T Consensus 11 ~~~~~~~~~~~~~-------~~~plvllHG~~~~~~~w~~~~~-----------------~L-------~~~~~vi~~D- 58 (276)
T TIGR02240 11 GQSIRTAVRPGKE-------GLTPLLIFNGIGANLELVFPFIE-----------------AL-------DPDLEVIAFD- 58 (276)
T ss_pred CcEEEEEEecCCC-------CCCcEEEEeCCCcchHHHHHHHH-----------------Hh-------ccCceEEEEC-
Confidence 4577887654211 34678999987666666532221 11 2457899999
Q ss_pred CCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecc
Q 012982 126 PIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQ 205 (452)
Q Consensus 126 PvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLk 205 (452)
..|-|.|-.. . ...+.+..++++.+++... ...+++|+|+|+||..+-.+|.+-.+ .++
T Consensus 59 l~G~G~S~~~-~--~~~~~~~~~~~~~~~i~~l-------~~~~~~LvG~S~GG~va~~~a~~~p~-----------~v~ 117 (276)
T TIGR02240 59 VPGVGGSSTP-R--HPYRFPGLAKLAARMLDYL-------DYGQVNAIGVSWGGALAQQFAHDYPE-----------RCK 117 (276)
T ss_pred CCCCCCCCCC-C--CcCcHHHHHHHHHHHHHHh-------CcCceEEEEECHHHHHHHHHHHHCHH-----------Hhh
Confidence 5599999421 1 1235566666666555442 23579999999999777766654433 588
Q ss_pred eeEecCCCCC
Q 012982 206 GVAIGNGLTD 215 (452)
Q Consensus 206 Gi~igng~~~ 215 (452)
++++.++...
T Consensus 118 ~lvl~~~~~~ 127 (276)
T TIGR02240 118 KLILAATAAG 127 (276)
T ss_pred heEEeccCCc
Confidence 9998887654
No 25
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.03 E-value=6.1e-09 Score=99.60 Aligned_cols=59 Identities=12% Similarity=-0.048 Sum_probs=49.6
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCCCHHHH
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQPLNSQ 423 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dqP~~~~ 423 (452)
+++|||++|..|.++|....+...+.+ ++..++.+.++||+++.++|+...
T Consensus 196 ~~P~lii~G~~D~~~~~~~~~~~~~~i-----------------------------~~~~~~~i~~~gH~~~~e~p~~f~ 246 (256)
T PRK10349 196 SMPFLRLYGYLDGLVPRKVVPMLDKLW-----------------------------PHSESYIFAKAAHAPFISHPAEFC 246 (256)
T ss_pred CCCeEEEecCCCccCCHHHHHHHHHhC-----------------------------CCCeEEEeCCCCCCccccCHHHHH
Confidence 489999999999999887776555554 233589999999999999999999
Q ss_pred HHHHHHHc
Q 012982 424 IMIEDWVL 431 (452)
Q Consensus 424 ~~i~~fl~ 431 (452)
+.+.+|-.
T Consensus 247 ~~l~~~~~ 254 (256)
T PRK10349 247 HLLVALKQ 254 (256)
T ss_pred HHHHHHhc
Confidence 99999864
No 26
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.01 E-value=2.4e-08 Score=93.31 Aligned_cols=58 Identities=17% Similarity=0.196 Sum_probs=49.4
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCCCHHHH
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQPLNSQ 423 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dqP~~~~ 423 (452)
++||++++|+.|.++|....+.+.+.+. +.++..+.++||+++.++|+...
T Consensus 193 ~~Pvlii~g~~D~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~gH~~~~~~p~~~~ 243 (251)
T TIGR02427 193 AVPTLCIAGDQDGSTPPELVREIADLVP-----------------------------GARFAEIRGAGHIPCVEQPEAFN 243 (251)
T ss_pred CCCeEEEEeccCCcCChHHHHHHHHhCC-----------------------------CceEEEECCCCCcccccChHHHH
Confidence 4899999999999999887776665542 22478899999999999999999
Q ss_pred HHHHHHH
Q 012982 424 IMIEDWV 430 (452)
Q Consensus 424 ~~i~~fl 430 (452)
+.+++|+
T Consensus 244 ~~i~~fl 250 (251)
T TIGR02427 244 AALRDFL 250 (251)
T ss_pred HHHHHHh
Confidence 9999997
No 27
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.01 E-value=2.9e-08 Score=96.00 Aligned_cols=59 Identities=15% Similarity=0.073 Sum_probs=50.8
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCCCHHHH
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQPLNSQ 423 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dqP~~~~ 423 (452)
++|||++.|..|.++|...++.+.+.+. +..++.|.+|||+++.++|+...
T Consensus 223 ~~Pvlli~G~~D~~v~~~~~~~~~~~~~-----------------------------~~~~~~i~~agH~~~~e~p~~~~ 273 (282)
T TIGR03343 223 KAKTLVTWGRDDRFVPLDHGLKLLWNMP-----------------------------DAQLHVFSRCGHWAQWEHADAFN 273 (282)
T ss_pred CCCEEEEEccCCCcCCchhHHHHHHhCC-----------------------------CCEEEEeCCCCcCCcccCHHHHH
Confidence 4799999999999999877777666552 33578899999999999999999
Q ss_pred HHHHHHHc
Q 012982 424 IMIEDWVL 431 (452)
Q Consensus 424 ~~i~~fl~ 431 (452)
++|.+|+.
T Consensus 274 ~~i~~fl~ 281 (282)
T TIGR03343 274 RLVIDFLR 281 (282)
T ss_pred HHHHHHhh
Confidence 99999985
No 28
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.01 E-value=2.9e-08 Score=96.32 Aligned_cols=139 Identities=15% Similarity=0.183 Sum_probs=86.3
Q ss_pred CCCCCCceeeeeecCCCCCceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCccccccccc
Q 012982 28 PKEALPTKSGYLPVNPATGSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSL 107 (452)
Q Consensus 28 ~~~~~~~~sGyl~v~~~~~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l 107 (452)
+-...+..+=|+.+.+ +... |.++-... +++++-++.++|= |++++. .
T Consensus 59 ~~~~v~~~~~~v~i~~--~~~i--w~~~~~~~----~~~~~plVliHGy-GAg~g~-----------------------f 106 (365)
T KOG4409|consen 59 SSVPVPYSKKYVRIPN--GIEI--WTITVSNE----SANKTPLVLIHGY-GAGLGL-----------------------F 106 (365)
T ss_pred hhcCCCcceeeeecCC--Ccee--EEEeeccc----ccCCCcEEEEecc-chhHHH-----------------------H
Confidence 3344455577777763 2222 22322221 2356667778863 444432 1
Q ss_pred ccCCCCcccccceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHH
Q 012982 108 KPNPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGY 187 (452)
Q Consensus 108 ~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~ 187 (452)
..|=.+..+.-||-.|| ..|-|.|.... .+.+...+-..+.+-+.+|.... .-.+.+|+|||+||......|.
T Consensus 107 ~~Nf~~La~~~~vyaiD-llG~G~SSRP~---F~~d~~~~e~~fvesiE~WR~~~---~L~KmilvGHSfGGYLaa~YAl 179 (365)
T KOG4409|consen 107 FRNFDDLAKIRNVYAID-LLGFGRSSRPK---FSIDPTTAEKEFVESIEQWRKKM---GLEKMILVGHSFGGYLAAKYAL 179 (365)
T ss_pred HHhhhhhhhcCceEEec-ccCCCCCCCCC---CCCCcccchHHHHHHHHHHHHHc---CCcceeEeeccchHHHHHHHHH
Confidence 22222345577899999 55999994321 33333444558889999998754 4558999999999988877777
Q ss_pred HHHHhcccCCCCceeecceeEecCCCCCh
Q 012982 188 FILKQNKQLPSSKRVNLQGVAIGNGLTDP 216 (452)
Q Consensus 188 ~i~~~n~~~~~~~~inLkGi~igng~~~p 216 (452)
+..+ .++-+++.+||--|
T Consensus 180 KyPe-----------rV~kLiLvsP~Gf~ 197 (365)
T KOG4409|consen 180 KYPE-----------RVEKLILVSPWGFP 197 (365)
T ss_pred hChH-----------hhceEEEecccccc
Confidence 7766 35567788877544
No 29
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=98.99 E-value=2.3e-08 Score=93.31 Aligned_cols=58 Identities=10% Similarity=-0.064 Sum_probs=48.9
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCCCHHHH
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQPLNSQ 423 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dqP~~~~ 423 (452)
+++|+|.+|..|.++|....+.+.+.+. +.++..+.++||+++.++|+...
T Consensus 188 ~~Pvlii~g~~D~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~gH~~~~e~p~~~~ 238 (245)
T TIGR01738 188 SVPFLRLYGYLDGLVPAKVVPYLDKLAP-----------------------------HSELYIFAKAAHAPFLSHAEAFC 238 (245)
T ss_pred CCCEEEEeecCCcccCHHHHHHHHHhCC-----------------------------CCeEEEeCCCCCCccccCHHHHH
Confidence 4799999999999999887776655542 22478899999999999999999
Q ss_pred HHHHHHH
Q 012982 424 IMIEDWV 430 (452)
Q Consensus 424 ~~i~~fl 430 (452)
+.|.+|+
T Consensus 239 ~~i~~fi 245 (245)
T TIGR01738 239 ALLVAFK 245 (245)
T ss_pred HHHHhhC
Confidence 9999985
No 30
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.97 E-value=5.8e-08 Score=99.51 Aligned_cols=107 Identities=13% Similarity=0.149 Sum_probs=68.7
Q ss_pred CCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCcccccceeeeecCCCcceeeccCCCCCCCChH
Q 012982 66 QTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQI 145 (452)
Q Consensus 66 ~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~ 145 (452)
..|.||.++|.++.+..+.... . . +.+..+|+-+| ..|.|.|... .....+.+
T Consensus 104 ~~p~vvllHG~~~~~~~~~~~~-------~----------~-------L~~~~~vi~~D-~rG~G~S~~~--~~~~~~~~ 156 (402)
T PLN02894 104 DAPTLVMVHGYGASQGFFFRNF-------D----------A-------LASRFRVIAID-QLGWGGSSRP--DFTCKSTE 156 (402)
T ss_pred CCCEEEEECCCCcchhHHHHHH-------H----------H-------HHhCCEEEEEC-CCCCCCCCCC--CcccccHH
Confidence 5699999999987666552211 0 1 23347899999 5599998321 11112334
Q ss_pred HHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCC
Q 012982 146 SVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGL 213 (452)
Q Consensus 146 ~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~ 213 (452)
++.+.+.+.+.+|.+.. ...+++|+|+|+||..+..+|.+..+ .++++++.++.
T Consensus 157 ~~~~~~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~p~-----------~v~~lvl~~p~ 210 (402)
T PLN02894 157 ETEAWFIDSFEEWRKAK---NLSNFILLGHSFGGYVAAKYALKHPE-----------HVQHLILVGPA 210 (402)
T ss_pred HHHHHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhCch-----------hhcEEEEECCc
Confidence 44555666667776542 34589999999999776666654322 57788887765
No 31
>PRK10749 lysophospholipase L2; Provisional
Probab=98.95 E-value=3.3e-08 Score=98.60 Aligned_cols=133 Identities=14% Similarity=0.028 Sum_probs=82.6
Q ss_pred eeeeecCCCCCceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCcc
Q 012982 36 SGYLPVNPATGSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWN 115 (452)
Q Consensus 36 sGyl~v~~~~~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~ 115 (452)
.+++.-.+ +..++|+.+... ..+|+||.++|-.+.+..+..+. +. +. .
T Consensus 32 ~~~~~~~~--g~~l~~~~~~~~-------~~~~~vll~HG~~~~~~~y~~~~---~~--------------l~------~ 79 (330)
T PRK10749 32 EAEFTGVD--DIPIRFVRFRAP-------HHDRVVVICPGRIESYVKYAELA---YD--------------LF------H 79 (330)
T ss_pred ceEEEcCC--CCEEEEEEccCC-------CCCcEEEEECCccchHHHHHHHH---HH--------------HH------H
Confidence 34444333 567888877632 24679999999865554442221 10 10 1
Q ss_pred cccceeeeecCCCcceeeccCCC---CCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHh
Q 012982 116 RIFGLLFIDNPIGAGFSFAATND---EIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQ 192 (452)
Q Consensus 116 ~~anllfiDqPvGtGfSy~~~~~---~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~ 192 (452)
+-.+++-+| -.|-|.|...... ....+.++.++|+..+++...+. +...+++|+|+|+||..+-.+|.+-
T Consensus 80 ~g~~v~~~D-~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~~~~~~l~GhSmGG~ia~~~a~~~--- 152 (330)
T PRK10749 80 LGYDVLIID-HRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQP---GPYRKRYALAHSMGGAILTLFLQRH--- 152 (330)
T ss_pred CCCeEEEEc-CCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhc---CCCCCeEEEEEcHHHHHHHHHHHhC---
Confidence 235789999 5599999532111 11235677788888877766543 3357899999999997665555432
Q ss_pred cccCCCCceeecceeEecCCCCC
Q 012982 193 NKQLPSSKRVNLQGVAIGNGLTD 215 (452)
Q Consensus 193 n~~~~~~~~inLkGi~igng~~~ 215 (452)
. -.++|+++.++...
T Consensus 153 -p-------~~v~~lvl~~p~~~ 167 (330)
T PRK10749 153 -P-------GVFDAIALCAPMFG 167 (330)
T ss_pred -C-------CCcceEEEECchhc
Confidence 1 15789998887643
No 32
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.94 E-value=2.6e-08 Score=101.59 Aligned_cols=127 Identities=20% Similarity=0.188 Sum_probs=81.6
Q ss_pred CceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCcccccceeeeec
Q 012982 46 GSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDN 125 (452)
Q Consensus 46 ~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDq 125 (452)
+..+|++.+.... .+.+|+||+++|..+.+..+-.+.+ .+. .+-.+++-+|
T Consensus 120 ~~~l~~~~~~p~~-----~~~~~~Vl~lHG~~~~~~~~~~~a~-----------------~L~------~~Gy~V~~~D- 170 (395)
T PLN02652 120 RNALFCRSWAPAA-----GEMRGILIIIHGLNEHSGRYLHFAK-----------------QLT------SCGFGVYAMD- 170 (395)
T ss_pred CCEEEEEEecCCC-----CCCceEEEEECCchHHHHHHHHHHH-----------------HHH------HCCCEEEEeC-
Confidence 4567777776532 2357899999999777665432221 111 1235789999
Q ss_pred CCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecc
Q 012982 126 PIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQ 205 (452)
Q Consensus 126 PvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLk 205 (452)
-.|-|.|... ..+..+.+..++|+.++++..-..+| ..+++|+|+|+||..+..+|. +.+ ..-.++
T Consensus 171 ~rGhG~S~~~--~~~~~~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~----~p~-----~~~~v~ 236 (395)
T PLN02652 171 WIGHGGSDGL--HGYVPSLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAAS----YPS-----IEDKLE 236 (395)
T ss_pred CCCCCCCCCC--CCCCcCHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHh----ccC-----cccccc
Confidence 5599998432 22344667778888887776655443 458999999999977654442 111 011588
Q ss_pred eeEecCCCCC
Q 012982 206 GVAIGNGLTD 215 (452)
Q Consensus 206 Gi~igng~~~ 215 (452)
|+++.+++..
T Consensus 237 glVL~sP~l~ 246 (395)
T PLN02652 237 GIVLTSPALR 246 (395)
T ss_pred eEEEECcccc
Confidence 9999888754
No 33
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=98.94 E-value=2.3e-08 Score=94.46 Aligned_cols=100 Identities=24% Similarity=0.280 Sum_probs=67.8
Q ss_pred CCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCcccccceeeeecCCCcceeeccCCCCCCCChHH
Q 012982 67 TPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQIS 146 (452)
Q Consensus 67 ~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~ 146 (452)
.|.||+++|.+|++..|-.+.+ .+ +..+++.+| ..|.|.|.... ..+.++
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~-----------------~l--------~~~~vi~~D-~~G~G~S~~~~----~~~~~~ 51 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGE-----------------AL--------PDYPRLYID-LPGHGGSAAIS----VDGFAD 51 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHH-----------------Hc--------CCCCEEEec-CCCCCCCCCcc----ccCHHH
Confidence 4789999999999877743321 01 237899999 66999994321 235666
Q ss_pred HHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCC
Q 012982 147 VAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGL 213 (452)
Q Consensus 147 ~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~ 213 (452)
.++++.+++.. +...+++++|+|+||..+-.+|.+..+ -.++++++.++.
T Consensus 52 ~~~~l~~~l~~-------~~~~~~~lvG~S~Gg~va~~~a~~~~~----------~~v~~lvl~~~~ 101 (242)
T PRK11126 52 VSRLLSQTLQS-------YNILPYWLVGYSLGGRIAMYYACQGLA----------GGLCGLIVEGGN 101 (242)
T ss_pred HHHHHHHHHHH-------cCCCCeEEEEECHHHHHHHHHHHhCCc----------ccccEEEEeCCC
Confidence 67766665543 235689999999999777766654321 027788876654
No 34
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.93 E-value=1.9e-08 Score=93.78 Aligned_cols=105 Identities=22% Similarity=0.329 Sum_probs=66.2
Q ss_pred CCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCcccccceeeeecCCCcceeeccCCCCCCCChHH
Q 012982 67 TPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQIS 146 (452)
Q Consensus 67 ~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~ 146 (452)
+|++|.++|.+|.+..+-.+.+ .+ .+..+++-+| .+|.|.|.... .....+.++
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~-----------------~L-------~~~~~v~~~d-~~g~G~s~~~~-~~~~~~~~~ 54 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIE-----------------LL-------GPHFRCLAID-LPGHGSSQSPD-EIERYDFEE 54 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHH-----------------Hh-------cccCeEEEEc-CCCCCCCCCCC-ccChhhHHH
Confidence 3789999999888776532211 11 1346899999 55999994321 112234455
Q ss_pred HHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCC
Q 012982 147 VAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLT 214 (452)
Q Consensus 147 ~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~ 214 (452)
.++++ +..+.+. +..++++|+|+|+||..+..+|.+..+ .++++++.++..
T Consensus 55 ~~~~~---~~~~~~~---~~~~~~~l~G~S~Gg~ia~~~a~~~~~-----------~v~~lil~~~~~ 105 (251)
T TIGR03695 55 AAQDI---LATLLDQ---LGIEPFFLVGYSMGGRIALYYALQYPE-----------RVQGLILESGSP 105 (251)
T ss_pred HHHHH---HHHHHHH---cCCCeEEEEEeccHHHHHHHHHHhCch-----------heeeeEEecCCC
Confidence 55552 2333332 235689999999999887777765432 577888877653
No 35
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.91 E-value=1.6e-07 Score=97.58 Aligned_cols=137 Identities=11% Similarity=0.084 Sum_probs=82.0
Q ss_pred CCCCCceeeeeecCCCCCceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccc
Q 012982 29 KEALPTKSGYLPVNPATGSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLK 108 (452)
Q Consensus 29 ~~~~~~~sGyl~v~~~~~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~ 108 (452)
+-..+.-.-|+..+ +..+||+.....+ ....|.+|+++|.+|.+..|.... =| .+.
T Consensus 171 ~~~~~~~~~~~~~~---~~~l~~~~~gp~~-----~~~k~~VVLlHG~~~s~~~W~~~~--~~--------------~L~ 226 (481)
T PLN03087 171 DCDCKFCTSWLSSS---NESLFVHVQQPKD-----NKAKEDVLFIHGFISSSAFWTETL--FP--------------NFS 226 (481)
T ss_pred ccccceeeeeEeeC---CeEEEEEEecCCC-----CCCCCeEEEECCCCccHHHHHHHH--HH--------------HHH
Confidence 33333344666653 3577777655332 223478999999999888774210 00 111
Q ss_pred cCCCCcccccceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHH
Q 012982 109 PNPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYF 188 (452)
Q Consensus 109 ~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~ 188 (452)
. .+.+...++.+|.| |-|.|-.. .....+.++.++++. +.+++. +...+++|+|+|+||..+-.+|.+
T Consensus 227 ~---~~~~~yrVia~Dl~-G~G~S~~p--~~~~ytl~~~a~~l~---~~ll~~---lg~~k~~LVGhSmGG~iAl~~A~~ 294 (481)
T PLN03087 227 D---AAKSTYRLFAVDLL-GFGRSPKP--ADSLYTLREHLEMIE---RSVLER---YKVKSFHIVAHSLGCILALALAVK 294 (481)
T ss_pred H---HhhCCCEEEEECCC-CCCCCcCC--CCCcCCHHHHHHHHH---HHHHHH---cCCCCEEEEEECHHHHHHHHHHHh
Confidence 1 12445789999954 99998422 112235555555553 234443 335689999999999887777765
Q ss_pred HHHhcccCCCCceeecceeEecCC
Q 012982 189 ILKQNKQLPSSKRVNLQGVAIGNG 212 (452)
Q Consensus 189 i~~~n~~~~~~~~inLkGi~igng 212 (452)
..+ .++++++.++
T Consensus 295 ~Pe-----------~V~~LVLi~~ 307 (481)
T PLN03087 295 HPG-----------AVKSLTLLAP 307 (481)
T ss_pred ChH-----------hccEEEEECC
Confidence 443 4678887765
No 36
>PRK07581 hypothetical protein; Validated
Probab=98.91 E-value=8.6e-08 Score=95.89 Aligned_cols=59 Identities=19% Similarity=0.049 Sum_probs=51.1
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcC-CccccCCCCCHHH
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLG-AGHLVPTDQPLNS 422 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~-AGHmvp~dqP~~~ 422 (452)
++||||+.|+.|.++|....+.+.+.+. +.++.+|.+ +||+++.+||+..
T Consensus 275 ~~PtLvI~G~~D~~~p~~~~~~l~~~ip-----------------------------~a~l~~i~~~~GH~~~~~~~~~~ 325 (339)
T PRK07581 275 TAKTFVMPISTDLYFPPEDCEAEAALIP-----------------------------NAELRPIESIWGHLAGFGQNPAD 325 (339)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC-----------------------------CCeEEEeCCCCCccccccCcHHH
Confidence 4899999999999999988887766652 224788998 9999999999999
Q ss_pred HHHHHHHHc
Q 012982 423 QIMIEDWVL 431 (452)
Q Consensus 423 ~~~i~~fl~ 431 (452)
..+|++|+.
T Consensus 326 ~~~~~~~~~ 334 (339)
T PRK07581 326 IAFIDAALK 334 (339)
T ss_pred HHHHHHHHH
Confidence 999999984
No 37
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=98.89 E-value=1.8e-07 Score=95.08 Aligned_cols=134 Identities=13% Similarity=0.085 Sum_probs=82.7
Q ss_pred CCCCCCceeeeeecCCCCCceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCccccccccc
Q 012982 28 PKEALPTKSGYLPVNPATGSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSL 107 (452)
Q Consensus 28 ~~~~~~~~sGyl~v~~~~~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l 107 (452)
|--.+++-+|+....+ +-.+||.- . . +...|.+|.++|.|+.+..+-.+.+ .
T Consensus 98 ~~~~~~~~~~~~~~~~--~~~~~y~~--~-G-----~~~~~~ivllHG~~~~~~~w~~~~~-----------------~- 149 (383)
T PLN03084 98 PIFGLKMGAQSQASSD--LFRWFCVE--S-G-----SNNNPPVLLIHGFPSQAYSYRKVLP-----------------V- 149 (383)
T ss_pred ccccccccceeEEcCC--ceEEEEEe--c-C-----CCCCCeEEEECCCCCCHHHHHHHHH-----------------H-
Confidence 4444555566665422 44555442 2 2 2246899999999988777643321 1
Q ss_pred ccCCCCcccccceeeeecCCCcceeeccCCC-CCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHH
Q 012982 108 KPNPGSWNRIFGLLFIDNPIGAGFSFAATND-EIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIG 186 (452)
Q Consensus 108 ~~N~~SW~~~anllfiDqPvGtGfSy~~~~~-~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA 186 (452)
..+..+++-+| -.|.|+|...... ....+.++.++++.+++++. ...+++|+|+|+||..+-.+|
T Consensus 150 ------L~~~~~Via~D-lpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l-------~~~~~~LvG~s~GG~ia~~~a 215 (383)
T PLN03084 150 ------LSKNYHAIAFD-WLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDEL-------KSDKVSLVVQGYFSPPVVKYA 215 (383)
T ss_pred ------HhcCCEEEEEC-CCCCCCCCCCcccccccCCHHHHHHHHHHHHHHh-------CCCCceEEEECHHHHHHHHHH
Confidence 12347899999 5599999543211 11346667777777666543 235799999999996555444
Q ss_pred HHHHHhcccCCCCceeecceeEecCCCC
Q 012982 187 YFILKQNKQLPSSKRVNLQGVAIGNGLT 214 (452)
Q Consensus 187 ~~i~~~n~~~~~~~~inLkGi~igng~~ 214 (452)
.+..+ .++++++.|+..
T Consensus 216 ~~~P~-----------~v~~lILi~~~~ 232 (383)
T PLN03084 216 SAHPD-----------KIKKLILLNPPL 232 (383)
T ss_pred HhChH-----------hhcEEEEECCCC
Confidence 43322 588999888754
No 38
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.89 E-value=3.1e-07 Score=90.53 Aligned_cols=127 Identities=16% Similarity=0.224 Sum_probs=77.8
Q ss_pred eeeeeecCCCCCceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCc
Q 012982 35 KSGYLPVNPATGSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSW 114 (452)
Q Consensus 35 ~sGyl~v~~~~~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW 114 (452)
..+|+.+.+ +..++|.-.. . +. .|-+|+++||||.++..... . .+.
T Consensus 5 ~~~~~~~~~--~~~l~y~~~g--~-----~~-~~~lvllHG~~~~~~~~~~~----~--------------~~~------ 50 (306)
T TIGR01249 5 VSGYLNVSD--NHQLYYEQSG--N-----PD-GKPVVFLHGGPGSGTDPGCR----R--------------FFD------ 50 (306)
T ss_pred cCCeEEcCC--CcEEEEEECc--C-----CC-CCEEEEECCCCCCCCCHHHH----h--------------ccC------
Confidence 357888865 6778875432 1 22 34568899999986532100 0 010
Q ss_pred ccccceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcc
Q 012982 115 NRIFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNK 194 (452)
Q Consensus 115 ~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~ 194 (452)
.+..+|+.+| ..|.|.|..... ....+.++.++++..++. . +...+++++|+||||..+..+|.+..+
T Consensus 51 ~~~~~vi~~D-~~G~G~S~~~~~-~~~~~~~~~~~dl~~l~~----~---l~~~~~~lvG~S~GG~ia~~~a~~~p~--- 118 (306)
T TIGR01249 51 PETYRIVLFD-QRGCGKSTPHAC-LEENTTWDLVADIEKLRE----K---LGIKNWLVFGGSWGSTLALAYAQTHPE--- 118 (306)
T ss_pred ccCCEEEEEC-CCCCCCCCCCCC-cccCCHHHHHHHHHHHHH----H---cCCCCEEEEEECHHHHHHHHHHHHChH---
Confidence 1357899999 559999953211 122345556666554333 2 224579999999999877777665433
Q ss_pred cCCCCceeecceeEecCCCCC
Q 012982 195 QLPSSKRVNLQGVAIGNGLTD 215 (452)
Q Consensus 195 ~~~~~~~inLkGi~igng~~~ 215 (452)
.++++++.+....
T Consensus 119 --------~v~~lvl~~~~~~ 131 (306)
T TIGR01249 119 --------VVTGLVLRGIFLL 131 (306)
T ss_pred --------hhhhheeeccccC
Confidence 4678777776554
No 39
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.85 E-value=3.7e-07 Score=91.54 Aligned_cols=63 Identities=10% Similarity=-0.035 Sum_probs=52.1
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcC-CccccCCCCCHHH
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLG-AGHLVPTDQPLNS 422 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~-AGHmvp~dqP~~~ 422 (452)
++|+||+.|+.|.++|....+.+.+.+. ++-.+.+|.+ +||+++.++|++.
T Consensus 277 ~~PtLvi~G~~D~~~p~~~~~~~~~~i~----------------------------p~a~l~~i~~~aGH~~~lE~Pe~~ 328 (343)
T PRK08775 277 RVPTVVVAVEGDRLVPLADLVELAEGLG----------------------------PRGSLRVLRSPYGHDAFLKETDRI 328 (343)
T ss_pred CCCeEEEEeCCCEeeCHHHHHHHHHHcC----------------------------CCCeEEEEeCCccHHHHhcCHHHH
Confidence 4799999999999999888888777652 1224788874 9999999999999
Q ss_pred HHHHHHHHcCCC
Q 012982 423 QIMIEDWVLDKG 434 (452)
Q Consensus 423 ~~~i~~fl~~~~ 434 (452)
..+|++|+....
T Consensus 329 ~~~l~~FL~~~~ 340 (343)
T PRK08775 329 DAILTTALRSTG 340 (343)
T ss_pred HHHHHHHHHhcc
Confidence 999999996543
No 40
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=98.74 E-value=4.8e-07 Score=91.25 Aligned_cols=102 Identities=13% Similarity=0.018 Sum_probs=67.2
Q ss_pred CCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCcccccceeeeecCCCcceeeccCCCCCCCChH
Q 012982 66 QTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQI 145 (452)
Q Consensus 66 ~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~ 145 (452)
+.|.+|+++|.+|++..+..+.+ .+ .+..+++-+| ..|.|.|-.. ....+.+
T Consensus 130 ~~~~vl~~HG~~~~~~~~~~~~~-----------------~l-------~~~~~v~~~d-~~g~G~s~~~---~~~~~~~ 181 (371)
T PRK14875 130 DGTPVVLIHGFGGDLNNWLFNHA-----------------AL-------AAGRPVIALD-LPGHGASSKA---VGAGSLD 181 (371)
T ss_pred CCCeEEEECCCCCccchHHHHHH-----------------HH-------hcCCEEEEEc-CCCCCCCCCC---CCCCCHH
Confidence 46889999999888877644432 11 1236899999 5599998321 1234566
Q ss_pred HHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCC
Q 012982 146 SVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGL 213 (452)
Q Consensus 146 ~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~ 213 (452)
+.++++.++++. +...+++|+|+|+||..+..+|.+..+ .++++++.++.
T Consensus 182 ~~~~~~~~~~~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~~~-----------~v~~lv~~~~~ 231 (371)
T PRK14875 182 ELAAAVLAFLDA-------LGIERAHLVGHSMGGAVALRLAARAPQ-----------RVASLTLIAPA 231 (371)
T ss_pred HHHHHHHHHHHh-------cCCccEEEEeechHHHHHHHHHHhCch-----------heeEEEEECcC
Confidence 666666555532 334579999999999888777755322 46677766554
No 41
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.74 E-value=4.1e-07 Score=107.83 Aligned_cols=106 Identities=17% Similarity=0.174 Sum_probs=70.0
Q ss_pred CCCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCcccccceeeeecCCCcceeeccCC-----CC
Q 012982 65 SQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDNPIGAGFSFAATN-----DE 139 (452)
Q Consensus 65 ~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~-----~~ 139 (452)
++.|.+|++||.+|++..|..+.+ .+ .+..+++.+| ..|-|.|..... ..
T Consensus 1369 ~~~~~vVllHG~~~s~~~w~~~~~-----------------~L-------~~~~rVi~~D-l~G~G~S~~~~~~~~~~~~ 1423 (1655)
T PLN02980 1369 AEGSVVLFLHGFLGTGEDWIPIMK-----------------AI-------SGSARCISID-LPGHGGSKIQNHAKETQTE 1423 (1655)
T ss_pred CCCCeEEEECCCCCCHHHHHHHHH-----------------HH-------hCCCEEEEEc-CCCCCCCCCcccccccccc
Confidence 356899999999999887633321 11 2346899999 459999853221 11
Q ss_pred CCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCC
Q 012982 140 IPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGL 213 (452)
Q Consensus 140 ~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~ 213 (452)
...+.+..++++.+++.. +...+++|+|+|+||..+-.+|.+..+ .++++++.++.
T Consensus 1424 ~~~si~~~a~~l~~ll~~-------l~~~~v~LvGhSmGG~iAl~~A~~~P~-----------~V~~lVlis~~ 1479 (1655)
T PLN02980 1424 PTLSVELVADLLYKLIEH-------ITPGKVTLVGYSMGARIALYMALRFSD-----------KIEGAVIISGS 1479 (1655)
T ss_pred ccCCHHHHHHHHHHHHHH-------hCCCCEEEEEECHHHHHHHHHHHhChH-----------hhCEEEEECCC
Confidence 223556677776665543 234589999999999877777655433 56777776653
No 42
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.72 E-value=1.9e-06 Score=87.77 Aligned_cols=64 Identities=11% Similarity=0.011 Sum_probs=51.9
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEc-CCccccCCCCCHHH
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVL-GAGHLVPTDQPLNS 422 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~-~AGHmvp~dqP~~~ 422 (452)
++||||+.|+.|.++|....++..+.+.=.+ ...+++.|. ++||+.++++|++.
T Consensus 309 ~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~-------------------------~~~~l~~i~~~~GH~~~le~p~~~ 363 (379)
T PRK00175 309 KARFLVVSFTSDWLFPPARSREIVDALLAAG-------------------------ADVSYAEIDSPYGHDAFLLDDPRY 363 (379)
T ss_pred CCCEEEEEECCccccCHHHHHHHHHHHHhcC-------------------------CCeEEEEeCCCCCchhHhcCHHHH
Confidence 4799999999999999998887777763110 112467775 99999999999999
Q ss_pred HHHHHHHHcC
Q 012982 423 QIMIEDWVLD 432 (452)
Q Consensus 423 ~~~i~~fl~~ 432 (452)
.+.|++|+.+
T Consensus 364 ~~~L~~FL~~ 373 (379)
T PRK00175 364 GRLVRAFLER 373 (379)
T ss_pred HHHHHHHHHh
Confidence 9999999964
No 43
>PLN02965 Probable pheophorbidase
Probab=98.70 E-value=2.3e-07 Score=88.89 Aligned_cols=59 Identities=12% Similarity=-0.035 Sum_probs=50.4
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCCCHHHH
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQPLNSQ 423 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dqP~~~~ 423 (452)
++|+++..|..|.++|....+.+.+.+. +-++..+.+|||+++.++|++..
T Consensus 193 ~vP~lvi~g~~D~~~~~~~~~~~~~~~~-----------------------------~a~~~~i~~~GH~~~~e~p~~v~ 243 (255)
T PLN02965 193 KVPRVYIKTAKDNLFDPVRQDVMVENWP-----------------------------PAQTYVLEDSDHSAFFSVPTTLF 243 (255)
T ss_pred CCCEEEEEcCCCCCCCHHHHHHHHHhCC-----------------------------cceEEEecCCCCchhhcCHHHHH
Confidence 5899999999999999977777666552 23478899999999999999999
Q ss_pred HHHHHHHc
Q 012982 424 IMIEDWVL 431 (452)
Q Consensus 424 ~~i~~fl~ 431 (452)
.+|.+|+.
T Consensus 244 ~~l~~~~~ 251 (255)
T PLN02965 244 QYLLQAVS 251 (255)
T ss_pred HHHHHHHH
Confidence 99999974
No 44
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.69 E-value=1.8e-07 Score=101.03 Aligned_cols=130 Identities=21% Similarity=0.230 Sum_probs=79.5
Q ss_pred CceEEEEEEEecCCCCCCC-CCCCEEEEecCCCChhhhhh--hhhcccCeEEccCCcccccccccccCCCCcccccceee
Q 012982 46 GSAIFYAYYEAQTPITSSL-SQTPLLIWLQGGPGCSSMTG--NFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLF 122 (452)
Q Consensus 46 ~~~lfy~~~es~~~~~~~~-~~~PlilWlnGGPG~SS~~g--~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllf 122 (452)
+..+..|++...+. ++ ++-|++++++||| +++.+ ...|.= .=+.+-+.||+
T Consensus 375 G~~i~~~l~~P~~~---~~~k~yP~i~~~hGGP--~~~~~~~~~~~~q---------------------~~~~~G~~V~~ 428 (620)
T COG1506 375 GETIHGWLYKPPGF---DPRKKYPLIVYIHGGP--SAQVGYSFNPEIQ---------------------VLASAGYAVLA 428 (620)
T ss_pred CCEEEEEEecCCCC---CCCCCCCEEEEeCCCC--ccccccccchhhH---------------------HHhcCCeEEEE
Confidence 66899999987553 23 2359999999999 44433 111111 11356678999
Q ss_pred eecCCCcc-eeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCce
Q 012982 123 IDNPIGAG-FSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKR 201 (452)
Q Consensus 123 iDqPvGtG-fSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~ 201 (452)
++ |.|++ |...=.....-.--....+|+.+++. |+.+.|..-..++.|+|.|||| +++..++.+..
T Consensus 429 ~n-~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGG----ymtl~~~~~~~------- 495 (620)
T COG1506 429 PN-YRGSTGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGG----YMTLLAATKTP------- 495 (620)
T ss_pred eC-CCCCCccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHH----HHHHHHHhcCc-------
Confidence 99 87764 33210000000001124667888888 8888888877899999999999 45555554321
Q ss_pred eecceeEecCCCCC
Q 012982 202 VNLQGVAIGNGLTD 215 (452)
Q Consensus 202 inLkGi~igng~~~ 215 (452)
.++..+...+.++
T Consensus 496 -~f~a~~~~~~~~~ 508 (620)
T COG1506 496 -RFKAAVAVAGGVD 508 (620)
T ss_pred -hhheEEeccCcch
Confidence 3555555555544
No 45
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=98.67 E-value=1.1e-06 Score=85.12 Aligned_cols=115 Identities=16% Similarity=0.225 Sum_probs=75.8
Q ss_pred eeeeeecCCCCCceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCc
Q 012982 35 KSGYLPVNPATGSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSW 114 (452)
Q Consensus 35 ~sGyl~v~~~~~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW 114 (452)
..+|+.+. . +.+++.|.- +.+.|+++.|+|=|=.+=.+=+-.+ .+.
T Consensus 23 ~hk~~~~~----g-I~~h~~e~g------~~~gP~illlHGfPe~wyswr~q~~-----------------~la------ 68 (322)
T KOG4178|consen 23 SHKFVTYK----G-IRLHYVEGG------PGDGPIVLLLHGFPESWYSWRHQIP-----------------GLA------ 68 (322)
T ss_pred ceeeEEEc----c-EEEEEEeec------CCCCCEEEEEccCCccchhhhhhhh-----------------hhh------
Confidence 46788872 2 888888862 4478999999999877654411100 011
Q ss_pred ccccceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHh
Q 012982 115 NRIFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQ 192 (452)
Q Consensus 115 ~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~ 192 (452)
.....++.+| -.|-|+|..... -...+....+.|+..+| .. +..+++.|+|++||+..+=.+|....+.
T Consensus 69 ~~~~rviA~D-lrGyG~Sd~P~~-~~~Yt~~~l~~di~~ll----d~---Lg~~k~~lvgHDwGaivaw~la~~~Per 137 (322)
T KOG4178|consen 69 SRGYRVIAPD-LRGYGFSDAPPH-ISEYTIDELVGDIVALL----DH---LGLKKAFLVGHDWGAIVAWRLALFYPER 137 (322)
T ss_pred hcceEEEecC-CCCCCCCCCCCC-cceeeHHHHHHHHHHHH----HH---hccceeEEEeccchhHHHHHHHHhChhh
Confidence 1116688999 679999954221 12234555666655444 32 3477899999999998888888877774
No 46
>PLN02511 hydrolase
Probab=98.65 E-value=6.9e-07 Score=91.17 Aligned_cols=116 Identities=17% Similarity=0.167 Sum_probs=67.9
Q ss_pred eeeecCCCCCceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhh-h-hhhhcccCeEEccCCcccccccccccCCCCc
Q 012982 37 GYLPVNPATGSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSM-T-GNFLELGPWRVTLSQRQNAEQLSLKPNPGSW 114 (452)
Q Consensus 37 Gyl~v~~~~~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~-~-g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW 114 (452)
-++...+ +..+.+..+...... .+.++|++|.++|..|+|.. + -.+.. .+ .
T Consensus 74 e~l~~~D--G~~~~ldw~~~~~~~--~~~~~p~vvllHG~~g~s~~~y~~~~~~-----------------~~------~ 126 (388)
T PLN02511 74 ECLRTPD--GGAVALDWVSGDDRA--LPADAPVLILLPGLTGGSDDSYVRHMLL-----------------RA------R 126 (388)
T ss_pred EEEECCC--CCEEEEEecCccccc--CCCCCCEEEEECCCCCCCCCHHHHHHHH-----------------HH------H
Confidence 4555544 556655444321110 24468999999999998642 2 11110 00 1
Q ss_pred ccccceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHH
Q 012982 115 NRIFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIG 186 (452)
Q Consensus 115 ~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA 186 (452)
.+-.+++-+| -+|.|-|-...+.. .....++|+.++++..-.++| +.+++++|+|.||..+-.++
T Consensus 127 ~~g~~vv~~d-~rG~G~s~~~~~~~---~~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl 191 (388)
T PLN02511 127 SKGWRVVVFN-SRGCADSPVTTPQF---YSASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYL 191 (388)
T ss_pred HCCCEEEEEe-cCCCCCCCCCCcCE---EcCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHH
Confidence 2346789999 56999984322211 122346677666655555443 57899999999997655444
No 47
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.50 E-value=3.7e-06 Score=84.04 Aligned_cols=61 Identities=11% Similarity=0.157 Sum_probs=50.1
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCC-CHHH
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQ-PLNS 422 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dq-P~~~ 422 (452)
++++|+++|..|.+++..+++.+.+++.-+ +-++..+.+++|++..+. ++.+
T Consensus 270 ~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~---------------------------~~~l~~~~g~~H~i~~E~~~~~v 322 (332)
T TIGR01607 270 DIPILFIHSKGDCVCSYEGTVSFYNKLSIS---------------------------NKELHTLEDMDHVITIEPGNEEV 322 (332)
T ss_pred CCCEEEEEeCCCCccCHHHHHHHHHhccCC---------------------------CcEEEEECCCCCCCccCCCHHHH
Confidence 479999999999999999999888775321 124678999999999985 6788
Q ss_pred HHHHHHHHc
Q 012982 423 QIMIEDWVL 431 (452)
Q Consensus 423 ~~~i~~fl~ 431 (452)
.+.+.+||.
T Consensus 323 ~~~i~~wL~ 331 (332)
T TIGR01607 323 LKKIIEWIS 331 (332)
T ss_pred HHHHHHHhh
Confidence 888889985
No 48
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.43 E-value=7.3e-07 Score=82.75 Aligned_cols=55 Identities=24% Similarity=0.216 Sum_probs=46.6
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCCCHHHH
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQPLNSQ 423 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dqP~~~~ 423 (452)
++++++++|..|.++|....+...+.+ ++..++.+.++||....+.|+...
T Consensus 175 ~~p~l~i~~~~D~~~p~~~~~~~~~~~-----------------------------~~~~~~~~~~~GH~~~~~~~~~~~ 225 (230)
T PF00561_consen 175 KVPTLIIWGEDDPLVPPESSEQLAKLI-----------------------------PNSQLVLIEGSGHFAFLEGPDEFN 225 (230)
T ss_dssp TSEEEEEEETTCSSSHHHHHHHHHHHS-----------------------------TTEEEEEETTCCSTHHHHSHHHHH
T ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHhc-----------------------------CCCEEEECCCCChHHHhcCHHhhh
Confidence 489999999999999998888855554 233588999999999999999988
Q ss_pred HHHH
Q 012982 424 IMIE 427 (452)
Q Consensus 424 ~~i~ 427 (452)
++|.
T Consensus 226 ~~i~ 229 (230)
T PF00561_consen 226 EIII 229 (230)
T ss_dssp HHHH
T ss_pred hhhc
Confidence 8875
No 49
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.40 E-value=2.8e-05 Score=76.39 Aligned_cols=135 Identities=16% Similarity=0.187 Sum_probs=90.5
Q ss_pred eeeeecCCCCCceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCcc
Q 012982 36 SGYLPVNPATGSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWN 115 (452)
Q Consensus 36 sGyl~v~~~~~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~ 115 (452)
-|+....+ +..++|+.+....+ .+-+|++++|.=.++.-+-.+.+ .+..
T Consensus 11 ~~~~~~~d--~~~~~~~~~~~~~~------~~g~Vvl~HG~~Eh~~ry~~la~-----------------~l~~------ 59 (298)
T COG2267 11 EGYFTGAD--GTRLRYRTWAAPEP------PKGVVVLVHGLGEHSGRYEELAD-----------------DLAA------ 59 (298)
T ss_pred cceeecCC--CceEEEEeecCCCC------CCcEEEEecCchHHHHHHHHHHH-----------------HHHh------
Confidence 45555544 78999999987642 22899999998666665533221 1221
Q ss_pred cccceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhccc
Q 012982 116 RIFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQ 195 (452)
Q Consensus 116 ~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~ 195 (452)
.=++++=+|+ .|.|.|.. ...+...+..+...|+..+++..-.. ....|+||+|+|.||-.+...+.+..
T Consensus 60 ~G~~V~~~D~-RGhG~S~r-~~rg~~~~f~~~~~dl~~~~~~~~~~---~~~~p~~l~gHSmGg~Ia~~~~~~~~----- 129 (298)
T COG2267 60 RGFDVYALDL-RGHGRSPR-GQRGHVDSFADYVDDLDAFVETIAEP---DPGLPVFLLGHSMGGLIALLYLARYP----- 129 (298)
T ss_pred CCCEEEEecC-CCCCCCCC-CCcCCchhHHHHHHHHHHHHHHHhcc---CCCCCeEEEEeCcHHHHHHHHHHhCC-----
Confidence 2245778895 49999962 23344556777777877777766554 34779999999999955544443332
Q ss_pred CCCCceeecceeEecCCCCChh
Q 012982 196 LPSSKRVNLQGVAIGNGLTDPA 217 (452)
Q Consensus 196 ~~~~~~inLkGi~igng~~~p~ 217 (452)
-+++|+++-+|++...
T Consensus 130 ------~~i~~~vLssP~~~l~ 145 (298)
T COG2267 130 ------PRIDGLVLSSPALGLG 145 (298)
T ss_pred ------ccccEEEEECccccCC
Confidence 2799999999998754
No 50
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.38 E-value=5.9e-05 Score=72.27 Aligned_cols=265 Identities=15% Similarity=0.146 Sum_probs=149.4
Q ss_pred CceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhh-hh----hhhhcccCeEEccCCcccccccccccCCCCcccccce
Q 012982 46 GSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSS-MT----GNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGL 120 (452)
Q Consensus 46 ~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS-~~----g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anl 120 (452)
+..+|.-.+...+ .++.+-+|+.++|.=+-|| .+ -.|..+| .-+
T Consensus 37 G~~lft~~W~p~~----~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g---------------------------~~v 85 (313)
T KOG1455|consen 37 GAKLFTQSWLPLS----GTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSG---------------------------FAV 85 (313)
T ss_pred CCEeEEEecccCC----CCCCceEEEEEcCCcccchhhHHHHHHHHHhCC---------------------------CeE
Confidence 5678877766543 2356779999998655443 22 2222222 125
Q ss_pred eeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCc
Q 012982 121 LFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSK 200 (452)
Q Consensus 121 lfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~ 200 (452)
--+| -.|-|.|.. -..+..+.+.+++|...|+..+..+ .++++.|.||+|||.||- +|..+..+..
T Consensus 86 ~a~D-~~GhG~SdG--l~~yi~~~d~~v~D~~~~~~~i~~~-~e~~~lp~FL~GeSMGGA----V~Ll~~~k~p------ 151 (313)
T KOG1455|consen 86 YAID-YEGHGRSDG--LHAYVPSFDLVVDDVISFFDSIKER-EENKGLPRFLFGESMGGA----VALLIALKDP------ 151 (313)
T ss_pred EEee-ccCCCcCCC--CcccCCcHHHHHHHHHHHHHHHhhc-cccCCCCeeeeecCcchH----HHHHHHhhCC------
Confidence 6689 559999964 3457889999999999888877654 589999999999999994 4444444322
Q ss_pred eeecceeEecCCCCChhhhhhhhHHHhhhcCCCCHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhcCCCCc
Q 012982 201 RVNLQGVAIGNGLTDPATQVATHALNAYFSGLINERQKDELEKAQGEAIRLVKMGNWSEATNARNELLDLLQDMTGLATL 280 (452)
Q Consensus 201 ~inLkGi~igng~~~p~~q~~~~~~~a~~~gli~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~n~ 280 (452)
--..|+++..++.--...... .... ..++..+... ...
T Consensus 152 -~~w~G~ilvaPmc~i~~~~kp------------~p~v--------------------------~~~l~~l~~l---iP~ 189 (313)
T KOG1455|consen 152 -NFWDGAILVAPMCKISEDTKP------------HPPV--------------------------ISILTLLSKL---IPT 189 (313)
T ss_pred -cccccceeeecccccCCccCC------------CcHH--------------------------HHHHHHHHHh---CCc
Confidence 146677766665321100000 0000 0011111111 111
Q ss_pred ccccCCCCCChhHHHhhcCcHHHHHHhCCCCCCCcccCChHhHHhhhcCccccHHHHHHHHHhc--eeEEEEeccCCccC
Q 012982 281 YDFSKKVPYPTELVTRLLRIDEVKKALGAKETIVFEDCSDVVGEALHADEMKSVKFMVEFLVRN--TKVLLYQGHFDLRD 358 (452)
Q Consensus 281 Ydi~~~~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~~cs~~v~~~~~~d~~~~~~~~l~~Ll~~--irVliy~Gd~D~i~ 358 (452)
|-+--.. +.+...+.+++.|+.+.-++- .|..- ..+..+ .+.. .....++.-+++ ++++|.||..|.+|
T Consensus 190 wk~vp~~----d~~~~~~kdp~~r~~~~~npl-~y~g~-pRl~T~--~ElL-r~~~~le~~l~~vtvPflilHG~dD~VT 260 (313)
T KOG1455|consen 190 WKIVPTK----DIIDVAFKDPEKRKILRSDPL-CYTGK-PRLKTA--YELL-RVTADLEKNLNEVTVPFLILHGTDDKVT 260 (313)
T ss_pred eeecCCc----cccccccCCHHHHHHhhcCCc-eecCC-ccHHHH--HHHH-HHHHHHHHhcccccccEEEEecCCCccc
Confidence 1110000 123334556677777666432 22110 001000 1111 122334444443 79999999999999
Q ss_pred ChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCC-CCCHH---HHHHHHHHHcCC
Q 012982 359 GVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPT-DQPLN---SQIMIEDWVLDK 433 (452)
Q Consensus 359 n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~-dqP~~---~~~~i~~fl~~~ 433 (452)
-..+++...+.-.-..+ |+-.++|+=|-.-. +-+|. ++.-|.+||..+
T Consensus 261 Dp~~Sk~Lye~A~S~DK---------------------------TlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 261 DPKVSKELYEKASSSDK---------------------------TLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred CcHHHHHHHHhccCCCC---------------------------ceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 99999988876432211 57788899998776 44444 555667777543
No 51
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.35 E-value=5e-06 Score=82.65 Aligned_cols=60 Identities=23% Similarity=0.305 Sum_probs=52.8
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCCCHHHH
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQPLNSQ 423 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dqP~~~~ 423 (452)
+.||||..|+.|.++|...++...+++ +|..+..|.+|||-+..++|++..
T Consensus 264 ~~pvlii~G~~D~~~p~~~~~~~~~~~-----------------------------pn~~~~~I~~~gH~~h~e~Pe~~~ 314 (326)
T KOG1454|consen 264 KCPVLIIWGDKDQIVPLELAEELKKKL-----------------------------PNAELVEIPGAGHLPHLERPEEVA 314 (326)
T ss_pred CCceEEEEcCcCCccCHHHHHHHHhhC-----------------------------CCceEEEeCCCCcccccCCHHHHH
Confidence 378999999999999999777776665 355799999999999999999999
Q ss_pred HHHHHHHcC
Q 012982 424 IMIEDWVLD 432 (452)
Q Consensus 424 ~~i~~fl~~ 432 (452)
..|..|+..
T Consensus 315 ~~i~~Fi~~ 323 (326)
T KOG1454|consen 315 ALLRSFIAR 323 (326)
T ss_pred HHHHHHHHH
Confidence 999999964
No 52
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.35 E-value=4.2e-05 Score=76.94 Aligned_cols=63 Identities=11% Similarity=-0.009 Sum_probs=49.7
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEE-cCCccccCCCCCHHH
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVV-LGAGHLVPTDQPLNS 422 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V-~~AGHmvp~dqP~~~ 422 (452)
+++||++.|+.|.++|...++...+.+.= . . -..+++.+ .++||+++.++|++.
T Consensus 288 ~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~--~------~-----------------~~v~~~~i~~~~GH~~~le~p~~~ 342 (351)
T TIGR01392 288 KAPFLVVSITSDWLFPPAESRELAKALPA--A------G-----------------LRVTYVEIESPYGHDAFLVETDQV 342 (351)
T ss_pred CCCEEEEEeCCccccCHHHHHHHHHHHhh--c------C-----------------CceEEEEeCCCCCcchhhcCHHHH
Confidence 47999999999999999998888777630 0 0 01134455 589999999999999
Q ss_pred HHHHHHHHc
Q 012982 423 QIMIEDWVL 431 (452)
Q Consensus 423 ~~~i~~fl~ 431 (452)
.+.|.+|+.
T Consensus 343 ~~~l~~FL~ 351 (351)
T TIGR01392 343 EELIRGFLR 351 (351)
T ss_pred HHHHHHHhC
Confidence 999999973
No 53
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=98.29 E-value=7.6e-06 Score=79.42 Aligned_cols=58 Identities=10% Similarity=-0.071 Sum_probs=47.7
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCCCHHHH
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQPLNSQ 423 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dqP~~~~ 423 (452)
++|++++.|..|.++|..-.+++++.+. +. ..+++ ++||++++.+|+...
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~~--~~---------------------------~~~~l-~~gH~p~ls~P~~~~ 260 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRWP--PS---------------------------QVYEL-ESDHSPFFSTPFLLF 260 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhCC--cc---------------------------EEEEE-CCCCCccccCHHHHH
Confidence 4799999999999999988888777753 11 35667 599999999999999
Q ss_pred HHHHHHHc
Q 012982 424 IMIEDWVL 431 (452)
Q Consensus 424 ~~i~~fl~ 431 (452)
.+|.++..
T Consensus 261 ~~i~~~a~ 268 (273)
T PLN02211 261 GLLIKAAA 268 (273)
T ss_pred HHHHHHHH
Confidence 99988764
No 54
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=98.26 E-value=2.9e-05 Score=79.96 Aligned_cols=79 Identities=20% Similarity=0.280 Sum_probs=53.1
Q ss_pred cceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCC
Q 012982 118 FGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLP 197 (452)
Q Consensus 118 anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~ 197 (452)
.++|-+|.| |.|.|.... ...+. ..+...+.+|+...|.....++.|+|.|+||.+++.+|..-.+
T Consensus 223 y~vl~~D~p-G~G~s~~~~---~~~d~----~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~------ 288 (414)
T PRK05077 223 IAMLTIDMP-SVGFSSKWK---LTQDS----SLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPP------ 288 (414)
T ss_pred CEEEEECCC-CCCCCCCCC---ccccH----HHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCc------
Confidence 679999977 999994211 11111 2222445667766676667899999999999888877743211
Q ss_pred CCceeecceeEecCCCCC
Q 012982 198 SSKRVNLQGVAIGNGLTD 215 (452)
Q Consensus 198 ~~~~inLkGi~igng~~~ 215 (452)
.++++++.++..+
T Consensus 289 -----ri~a~V~~~~~~~ 301 (414)
T PRK05077 289 -----RLKAVACLGPVVH 301 (414)
T ss_pred -----CceEEEEECCccc
Confidence 5788887777654
No 55
>PRK05855 short chain dehydrogenase; Validated
Probab=98.26 E-value=4.6e-05 Score=81.52 Aligned_cols=98 Identities=17% Similarity=0.191 Sum_probs=65.0
Q ss_pred CceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCcccccceeeeec
Q 012982 46 GSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDN 125 (452)
Q Consensus 46 ~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDq 125 (452)
+..+.|+.+. +.+.|.||.++|.++.+..+..+.+ .+ .+..+|+.+|
T Consensus 12 g~~l~~~~~g--------~~~~~~ivllHG~~~~~~~w~~~~~-----------------~L-------~~~~~Vi~~D- 58 (582)
T PRK05855 12 GVRLAVYEWG--------DPDRPTVVLVHGYPDNHEVWDGVAP-----------------LL-------ADRFRVVAYD- 58 (582)
T ss_pred CEEEEEEEcC--------CCCCCeEEEEcCCCchHHHHHHHHH-----------------Hh-------hcceEEEEec-
Confidence 5567666432 1246899999999888776643321 11 2347899999
Q ss_pred CCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchh
Q 012982 126 PIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVP 183 (452)
Q Consensus 126 PvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP 183 (452)
..|.|.|..... ....+.++.++|+.++++..- ...+++|+|+|+||..+-
T Consensus 59 ~~G~G~S~~~~~-~~~~~~~~~a~dl~~~i~~l~------~~~~~~lvGhS~Gg~~a~ 109 (582)
T PRK05855 59 VRGAGRSSAPKR-TAAYTLARLADDFAAVIDAVS------PDRPVHLLAHDWGSIQGW 109 (582)
T ss_pred CCCCCCCCCCCc-ccccCHHHHHHHHHHHHHHhC------CCCcEEEEecChHHHHHH
Confidence 559999953221 123467788888888777531 135799999999995443
No 56
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.22 E-value=0.00021 Score=72.91 Aligned_cols=64 Identities=14% Similarity=0.069 Sum_probs=52.3
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcC-CccccCCCCCHHH
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLG-AGHLVPTDQPLNS 422 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~-AGHmvp~dqP~~~ 422 (452)
+.|||++.|+.|.++|....++..+.+.-.+ .+.++.+|.+ +||+.+.++|+..
T Consensus 323 ~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~-------------------------~~a~l~~I~s~~GH~~~le~p~~~ 377 (389)
T PRK06765 323 EANVLMIPCKQDLLQPPRYNYKMVDILQKQG-------------------------KYAEVYEIESINGHMAGVFDIHLF 377 (389)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHhhhcC-------------------------CCeEEEEECCCCCcchhhcCHHHH
Confidence 4799999999999999988887766653100 1346888985 9999999999999
Q ss_pred HHHHHHHHcC
Q 012982 423 QIMIEDWVLD 432 (452)
Q Consensus 423 ~~~i~~fl~~ 432 (452)
...|++|+..
T Consensus 378 ~~~I~~FL~~ 387 (389)
T PRK06765 378 EKKIYEFLNR 387 (389)
T ss_pred HHHHHHHHcc
Confidence 9999999964
No 57
>PLN02872 triacylglycerol lipase
Probab=98.21 E-value=0.0001 Score=75.30 Aligned_cols=60 Identities=12% Similarity=0.065 Sum_probs=49.1
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccc---cCCCCCH
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHL---VPTDQPL 420 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHm---vp~dqP~ 420 (452)
+++|+|+.|..|.+++...++++.+++.-. ..+..+.++||+ ...+.|+
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~----------------------------~~l~~l~~~gH~dfi~~~eape 376 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELPSK----------------------------PELLYLENYGHIDFLLSTSAKE 376 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCCCc----------------------------cEEEEcCCCCCHHHHhCcchHH
Confidence 479999999999999999999998887410 135678999996 3458999
Q ss_pred HHHHHHHHHHc
Q 012982 421 NSQIMIEDWVL 431 (452)
Q Consensus 421 ~~~~~i~~fl~ 431 (452)
.+.+.|.+|+.
T Consensus 377 ~V~~~Il~fL~ 387 (395)
T PLN02872 377 DVYNHMIQFFR 387 (395)
T ss_pred HHHHHHHHHHH
Confidence 99999999996
No 58
>PRK10566 esterase; Provisional
Probab=98.19 E-value=3.8e-05 Score=72.98 Aligned_cols=60 Identities=17% Similarity=0.201 Sum_probs=45.9
Q ss_pred eeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCCCHHHHH
Q 012982 345 TKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQPLNSQI 424 (452)
Q Consensus 345 irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dqP~~~~~ 424 (452)
.+||+.+|..|.++|...++++.+.++-.+.+ .++++.++.++||.+. | ..+.
T Consensus 187 ~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~-----------------------~~~~~~~~~~~~H~~~---~-~~~~ 239 (249)
T PRK10566 187 RPLLLWHGLADDVVPAAESLRLQQALRERGLD-----------------------KNLTCLWEPGVRHRIT---P-EALD 239 (249)
T ss_pred CCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCC-----------------------cceEEEecCCCCCccC---H-HHHH
Confidence 69999999999999999999988877533221 2457899999999974 3 3556
Q ss_pred HHHHHHc
Q 012982 425 MIEDWVL 431 (452)
Q Consensus 425 ~i~~fl~ 431 (452)
.+.+||.
T Consensus 240 ~~~~fl~ 246 (249)
T PRK10566 240 AGVAFFR 246 (249)
T ss_pred HHHHHHH
Confidence 6666775
No 59
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.18 E-value=2.2e-05 Score=74.04 Aligned_cols=108 Identities=21% Similarity=0.283 Sum_probs=71.8
Q ss_pred CCCEEEEecCCCChhhh-hhhhhcccCeEEccCCcccccccccccCCCCcccccceeeeecCCCcceeeccCCCCCCCCh
Q 012982 66 QTPLLIWLQGGPGCSSM-TGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQ 144 (452)
Q Consensus 66 ~~PlilWlnGGPG~SS~-~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~~ 144 (452)
.-|+++.++|| |.|.+ +..|. -+.+.. -..-++-+| -+|.|-|...+..+ -+.
T Consensus 73 ~gpil~l~HG~-G~S~LSfA~~a-------------------~el~s~---~~~r~~a~D-lRgHGeTk~~~e~d--lS~ 126 (343)
T KOG2564|consen 73 EGPILLLLHGG-GSSALSFAIFA-------------------SELKSK---IRCRCLALD-LRGHGETKVENEDD--LSL 126 (343)
T ss_pred CccEEEEeecC-cccchhHHHHH-------------------HHHHhh---cceeEEEee-ccccCccccCChhh--cCH
Confidence 56999999998 87776 34442 011100 011237789 89999997766544 467
Q ss_pred HHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCC
Q 012982 145 ISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGL 213 (452)
Q Consensus 145 ~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~ 213 (452)
+..++|+...++.+|..- ..++.|+|+|.||-.+.+.| ..+ .+ -+|.|+.+.+=+
T Consensus 127 eT~~KD~~~~i~~~fge~----~~~iilVGHSmGGaIav~~a----~~k-~l-----psl~Gl~viDVV 181 (343)
T KOG2564|consen 127 ETMSKDFGAVIKELFGEL----PPQIILVGHSMGGAIAVHTA----ASK-TL-----PSLAGLVVIDVV 181 (343)
T ss_pred HHHHHHHHHHHHHHhccC----CCceEEEeccccchhhhhhh----hhh-hc-----hhhhceEEEEEe
Confidence 888999999999998643 45799999999996553333 221 11 257888776544
No 60
>PRK10985 putative hydrolase; Provisional
Probab=98.17 E-value=0.00017 Score=71.84 Aligned_cols=46 Identities=11% Similarity=-0.092 Sum_probs=34.6
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCC
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQ 418 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dq 418 (452)
.+++++++|+.|.+++....+...+.. ++++++.+.++||+.+.+.
T Consensus 255 ~~P~lii~g~~D~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 255 RKPTLIIHAKDDPFMTHEVIPKPESLP-----------------------------PNVEYQLTEHGGHVGFVGG 300 (324)
T ss_pred CCCEEEEecCCCCCCChhhChHHHHhC-----------------------------CCeEEEECCCCCceeeCCC
Confidence 479999999999999876554432211 3456889999999999874
No 61
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.02 E-value=8.3e-05 Score=68.75 Aligned_cols=59 Identities=17% Similarity=0.193 Sum_probs=44.4
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCCCHHHH
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQPLNSQ 423 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dqP~~~~ 423 (452)
.+++++..|+.|.+.+......+.+.+.. ...++++.++||+.+.++|+...
T Consensus 221 ~~P~l~i~g~~d~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~gH~~~~~~p~~~~ 272 (282)
T COG0596 221 TVPTLIIHGEDDPVVPAELARRLAAALPN----------------------------DARLVVIPGAGHFPHLEAPEAFA 272 (282)
T ss_pred CCCeEEEecCCCCcCCHHHHHHHHhhCCC----------------------------CceEEEeCCCCCcchhhcHHHHH
Confidence 38999999999966666554445444432 12578999999999999999887
Q ss_pred HHHHHHH
Q 012982 424 IMIEDWV 430 (452)
Q Consensus 424 ~~i~~fl 430 (452)
+.+.+|+
T Consensus 273 ~~i~~~~ 279 (282)
T COG0596 273 AALLAFL 279 (282)
T ss_pred HHHHHHH
Confidence 7777654
No 62
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=98.01 E-value=0.00014 Score=70.47 Aligned_cols=78 Identities=22% Similarity=0.198 Sum_probs=52.6
Q ss_pred cceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCC
Q 012982 118 FGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLP 197 (452)
Q Consensus 118 anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~ 197 (452)
.+++-+|.| |.|.|... ..+.++..+|+.++++.+-+..|.+ .++.++|+|.||..+-.+|. ..
T Consensus 58 ~~v~~~Dl~-G~G~S~~~-----~~~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~----~~---- 121 (274)
T TIGR03100 58 FPVLRFDYR-GMGDSEGE-----NLGFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAP----AD---- 121 (274)
T ss_pred CEEEEeCCC-CCCCCCCC-----CCCHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhh----hC----
Confidence 678999955 99998421 1245556777777777655544433 46999999999965444432 11
Q ss_pred CCceeecceeEecCCCCC
Q 012982 198 SSKRVNLQGVAIGNGLTD 215 (452)
Q Consensus 198 ~~~~inLkGi~igng~~~ 215 (452)
-.++|+++.+++..
T Consensus 122 ----~~v~~lil~~p~~~ 135 (274)
T TIGR03100 122 ----LRVAGLVLLNPWVR 135 (274)
T ss_pred ----CCccEEEEECCccC
Confidence 16899999998754
No 63
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=97.93 E-value=5.3e-05 Score=70.39 Aligned_cols=91 Identities=16% Similarity=0.147 Sum_probs=57.6
Q ss_pred cccceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhccc
Q 012982 116 RIFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQ 195 (452)
Q Consensus 116 ~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~ 195 (452)
+=..|+.+|..-+.||+..-........-....+|+.++++...++. .....++.|+|.||||+.+..++.+ ..
T Consensus 13 ~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG~~a~~~~~~----~~- 86 (213)
T PF00326_consen 13 QGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGGYLALLAATQ----HP- 86 (213)
T ss_dssp TT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHHHHHHHHHHH----TC-
T ss_pred CCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccc-cccceeEEEEcccccccccchhhcc----cc-
Confidence 44678999977667776532111122223456778888776665543 4556789999999999777666542 21
Q ss_pred CCCCceeecceeEecCCCCChhh
Q 012982 196 LPSSKRVNLQGVAIGNGLTDPAT 218 (452)
Q Consensus 196 ~~~~~~inLkGi~igng~~~p~~ 218 (452)
-.+++++.++|.+|...
T Consensus 87 ------~~f~a~v~~~g~~d~~~ 103 (213)
T PF00326_consen 87 ------DRFKAAVAGAGVSDLFS 103 (213)
T ss_dssp ------CGSSEEEEESE-SSTTC
T ss_pred ------eeeeeeeccceecchhc
Confidence 15788999999888654
No 64
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.76 E-value=4e-05 Score=76.50 Aligned_cols=134 Identities=20% Similarity=0.278 Sum_probs=80.1
Q ss_pred eEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCcccccceeeeecCC
Q 012982 48 AIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDNPI 127 (452)
Q Consensus 48 ~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDqPv 127 (452)
.-.||++++.+.- +|++|||+|++||| |.+.+.=|..+. ...+=+...+...+|.+|-..
T Consensus 105 ~~s~Wlvk~P~~~--~pk~DpVlIYlHGG-------GY~l~~~p~qi~-----------~L~~i~~~l~~~SILvLDYsL 164 (374)
T PF10340_consen 105 SQSYWLVKAPNRF--KPKSDPVLIYLHGG-------GYFLGTTPSQIE-----------FLLNIYKLLPEVSILVLDYSL 164 (374)
T ss_pred cceEEEEeCCccc--CCCCCcEEEEEcCC-------eeEecCCHHHHH-----------HHHHHHHHcCCCeEEEEeccc
Confidence 5679999852211 47789999999999 445555555432 111111122233899999432
Q ss_pred CcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeeccee
Q 012982 128 GAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGV 207 (452)
Q Consensus 128 GtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi 207 (452)
-. | ......+|+-. .++.+..+...+. ...+++.|.|+|-||+.+-.+..++.+.+.. .--+.+
T Consensus 165 t~--~-~~~~~~yPtQL----~qlv~~Y~~Lv~~---~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~------~~Pk~~ 228 (374)
T PF10340_consen 165 TS--S-DEHGHKYPTQL----RQLVATYDYLVES---EGNKNIILMGDSAGGNLALSFLQYLKKPNKL------PYPKSA 228 (374)
T ss_pred cc--c-ccCCCcCchHH----HHHHHHHHHHHhc---cCCCeEEEEecCccHHHHHHHHHHHhhcCCC------CCCcee
Confidence 22 0 00112233222 2333333434422 2357899999999999999999888664432 234689
Q ss_pred EecCCCCChh
Q 012982 208 AIGNGLTDPA 217 (452)
Q Consensus 208 ~igng~~~p~ 217 (452)
++..||+++.
T Consensus 229 iLISPWv~l~ 238 (374)
T PF10340_consen 229 ILISPWVNLV 238 (374)
T ss_pred EEECCCcCCc
Confidence 9999999985
No 65
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.40 E-value=0.0018 Score=62.97 Aligned_cols=96 Identities=21% Similarity=0.184 Sum_probs=61.4
Q ss_pred CCCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCcccccceeeeecCCCcceeeccCCCCCCC
Q 012982 63 SLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPR 142 (452)
Q Consensus 63 ~~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~ 142 (452)
+..+.|-++-++|==|+--.|.-+.-+ -.. ++. +.+.-|| -.--|.|- ...+.
T Consensus 48 ~~~~~Pp~i~lHGl~GS~~Nw~sv~k~------Ls~-------~l~---------~~v~~vd-~RnHG~Sp----~~~~h 100 (315)
T KOG2382|consen 48 NLERAPPAIILHGLLGSKENWRSVAKN------LSR-------KLG---------RDVYAVD-VRNHGSSP----KITVH 100 (315)
T ss_pred ccCCCCceEEecccccCCCCHHHHHHH------hcc-------ccc---------CceEEEe-cccCCCCc----ccccc
Confidence 466889999999855553333222110 000 111 1677788 78888883 23456
Q ss_pred ChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHH
Q 012982 143 DQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFI 189 (452)
Q Consensus 143 ~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i 189 (452)
+-...|+|+..|+...-.. ++..+..|.|+|.|| -..+++...
T Consensus 101 ~~~~ma~dv~~Fi~~v~~~---~~~~~~~l~GHsmGG-~~~~m~~t~ 143 (315)
T KOG2382|consen 101 NYEAMAEDVKLFIDGVGGS---TRLDPVVLLGHSMGG-VKVAMAETL 143 (315)
T ss_pred CHHHHHHHHHHHHHHcccc---cccCCceecccCcch-HHHHHHHHH
Confidence 7788899988888776542 567899999999999 334444333
No 66
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.38 E-value=0.0066 Score=64.22 Aligned_cols=82 Identities=11% Similarity=0.080 Sum_probs=50.1
Q ss_pred cceeeeecCCCcceeeccCCCCCCCChHHHH-HHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhc-cc
Q 012982 118 FGLLFIDNPIGAGFSFAATNDEIPRDQISVA-KHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQN-KQ 195 (452)
Q Consensus 118 anllfiDqPvGtGfSy~~~~~~~~~~~~~~a-~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n-~~ 195 (452)
.+++-|| -.|-|.|... .+.++.+ +.+.++|..+.+. ....++.++|.|.||..+...+..+.... .
T Consensus 221 f~V~~iD-wrgpg~s~~~------~~~ddY~~~~i~~al~~v~~~---~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~- 289 (532)
T TIGR01838 221 HTVFVIS-WRNPDASQAD------KTFDDYIRDGVIAALEVVEAI---TGEKQVNCVGYCIGGTLLSTALAYLAARGDD- 289 (532)
T ss_pred cEEEEEE-CCCCCccccc------CChhhhHHHHHHHHHHHHHHh---cCCCCeEEEEECcCcHHHHHHHHHHHHhCCC-
Confidence 5688889 5688877321 1233333 4466666666543 34678999999999988755333333321 1
Q ss_pred CCCCceeecceeEecCCCCCh
Q 012982 196 LPSSKRVNLQGVAIGNGLTDP 216 (452)
Q Consensus 196 ~~~~~~inLkGi~igng~~~p 216 (452)
-.++++++.+..+|.
T Consensus 290 ------~rv~slvll~t~~Df 304 (532)
T TIGR01838 290 ------KRIKSATFFTTLLDF 304 (532)
T ss_pred ------CccceEEEEecCcCC
Confidence 157787777666664
No 67
>PRK10115 protease 2; Provisional
Probab=97.32 E-value=0.0013 Score=71.97 Aligned_cols=135 Identities=16% Similarity=0.111 Sum_probs=73.4
Q ss_pred CceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCcccccceeeeec
Q 012982 46 GSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDN 125 (452)
Q Consensus 46 ~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDq 125 (452)
+..+-.|++...... .....|++|+.+||||.+...+...+. .+|.+.-=++.+=.
T Consensus 426 G~~Ip~~l~~~~~~~--~~~~~P~ll~~hGg~~~~~~p~f~~~~----------------------~~l~~rG~~v~~~n 481 (686)
T PRK10115 426 GVEVPVSLVYHRKHF--RKGHNPLLVYGYGSYGASIDADFSFSR----------------------LSLLDRGFVYAIVH 481 (686)
T ss_pred CCEEEEEEEEECCCC--CCCCCCEEEEEECCCCCCCCCCccHHH----------------------HHHHHCCcEEEEEE
Confidence 566776655433211 133569999999999998643222111 12333332333333
Q ss_pred CCCcc-eee--ccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCcee
Q 012982 126 PIGAG-FSF--AATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRV 202 (452)
Q Consensus 126 PvGtG-fSy--~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~i 202 (452)
++|.| |-. ........ -...-+|+..+.+...++ .--...++.|.|-||||..+-. ++.+...
T Consensus 482 ~RGs~g~G~~w~~~g~~~~--k~~~~~D~~a~~~~Lv~~-g~~d~~rl~i~G~S~GG~l~~~----~~~~~Pd------- 547 (686)
T PRK10115 482 VRGGGELGQQWYEDGKFLK--KKNTFNDYLDACDALLKL-GYGSPSLCYGMGGSAGGMLMGV----AINQRPE------- 547 (686)
T ss_pred cCCCCccCHHHHHhhhhhc--CCCcHHHHHHHHHHHHHc-CCCChHHeEEEEECHHHHHHHH----HHhcChh-------
Confidence 77654 332 11110000 012345666655444443 2334678999999999964443 3332211
Q ss_pred ecceeEecCCCCChhh
Q 012982 203 NLQGVAIGNGLTDPAT 218 (452)
Q Consensus 203 nLkGi~igng~~~p~~ 218 (452)
.+++++...|++|...
T Consensus 548 lf~A~v~~vp~~D~~~ 563 (686)
T PRK10115 548 LFHGVIAQVPFVDVVT 563 (686)
T ss_pred heeEEEecCCchhHhh
Confidence 5889999999988754
No 68
>PRK11071 esterase YqiA; Provisional
Probab=97.16 E-value=0.0074 Score=55.22 Aligned_cols=53 Identities=17% Similarity=-0.001 Sum_probs=43.7
Q ss_pred eeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCCCHHHHH
Q 012982 345 TKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQPLNSQI 424 (452)
Q Consensus 345 irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dqP~~~~~ 424 (452)
.+|+|.+|..|-++|+..+.+..+.. ..+.+.||+|..- ..+..++
T Consensus 137 ~~v~iihg~~De~V~~~~a~~~~~~~--------------------------------~~~~~~ggdH~f~--~~~~~~~ 182 (190)
T PRK11071 137 DLIWLLQQTGDEVLDYRQAVAYYAAC--------------------------------RQTVEEGGNHAFV--GFERYFN 182 (190)
T ss_pred hhEEEEEeCCCCcCCHHHHHHHHHhc--------------------------------ceEEECCCCcchh--hHHHhHH
Confidence 68999999999999999998887742 2567899999983 3388889
Q ss_pred HHHHHHc
Q 012982 425 MIEDWVL 431 (452)
Q Consensus 425 ~i~~fl~ 431 (452)
.+.+|+.
T Consensus 183 ~i~~fl~ 189 (190)
T PRK11071 183 QIVDFLG 189 (190)
T ss_pred HHHHHhc
Confidence 9999873
No 69
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=97.14 E-value=0.0045 Score=68.55 Aligned_cols=84 Identities=18% Similarity=0.245 Sum_probs=52.9
Q ss_pred cccceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCC--------------CCCCCCEEEEeccCCccc
Q 012982 116 RIFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDP--------------LFKNRPIYITGESYAGKY 181 (452)
Q Consensus 116 ~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp--------------~~~~~~~yl~GESYgG~y 181 (452)
.=+.+|++| .+|+|-|-..-. .-..+-.+|..+ +.+|+.... ...+-++-++|.||||..
T Consensus 278 rGYaVV~~D-~RGtg~SeG~~~----~~~~~E~~D~~~-vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~ 351 (767)
T PRK05371 278 RGFAVVYVS-GIGTRGSDGCPT----TGDYQEIESMKA-VIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTL 351 (767)
T ss_pred CCeEEEEEc-CCCCCCCCCcCc----cCCHHHHHHHHH-HHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHH
Confidence 456799999 899999954311 111233445544 445665321 123569999999999966
Q ss_pred hhHHHHHHHHhcccCCCCceeecceeEecCCCCCh
Q 012982 182 VPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDP 216 (452)
Q Consensus 182 vP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p 216 (452)
.-.+|..-. -.||+|+-..++.+.
T Consensus 352 ~~~aAa~~p-----------p~LkAIVp~a~is~~ 375 (767)
T PRK05371 352 PNAVATTGV-----------EGLETIIPEAAISSW 375 (767)
T ss_pred HHHHHhhCC-----------CcceEEEeeCCCCcH
Confidence 554442211 268999988888764
No 70
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=97.14 E-value=0.0034 Score=69.27 Aligned_cols=62 Identities=16% Similarity=0.192 Sum_probs=49.6
Q ss_pred eeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCCC-HHHH
Q 012982 345 TKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQP-LNSQ 423 (452)
Q Consensus 345 irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dqP-~~~~ 423 (452)
.+.|+.+|..|..+.+..+..++++|+-.|.. | ..+++.+..|-.-.-.. ...+
T Consensus 683 ~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~-~------------------------~~~vypde~H~is~~~~~~~~~ 737 (755)
T KOG2100|consen 683 PKLLLIHGTEDDNVHFQQSAILIKALQNAGVP-F------------------------RLLVYPDENHGISYVEVISHLY 737 (755)
T ss_pred CCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCc-e------------------------EEEEeCCCCcccccccchHHHH
Confidence 46899999999999999999999999876664 3 57889999998776554 3455
Q ss_pred HHHHHHHc
Q 012982 424 IMIEDWVL 431 (452)
Q Consensus 424 ~~i~~fl~ 431 (452)
..+..|+.
T Consensus 738 ~~~~~~~~ 745 (755)
T KOG2100|consen 738 EKLDRFLR 745 (755)
T ss_pred HHHHHHHH
Confidence 66667775
No 71
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=97.10 E-value=0.02 Score=57.50 Aligned_cols=61 Identities=13% Similarity=0.090 Sum_probs=45.7
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCCC---H
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQP---L 420 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dqP---~ 420 (452)
+++|++++|..|.++|...++.+.+.+.-. ..++.+ .++||+.+.+.+ +
T Consensus 286 ~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~---------------------------~~~~~~-~~~gH~~~~~~~~~~~ 337 (350)
T TIGR01836 286 KMPILNIYAERDHLVPPDASKALNDLVSSE---------------------------DYTELS-FPGGHIGIYVSGKAQK 337 (350)
T ss_pred CCCeEEEecCCCCcCCHHHHHHHHHHcCCC---------------------------CeEEEE-cCCCCEEEEECchhHh
Confidence 479999999999999999999888876411 113444 458999988866 5
Q ss_pred HHHHHHHHHHcC
Q 012982 421 NSQIMIEDWVLD 432 (452)
Q Consensus 421 ~~~~~i~~fl~~ 432 (452)
.+...+.+|+..
T Consensus 338 ~v~~~i~~wl~~ 349 (350)
T TIGR01836 338 EVPPAIGKWLQA 349 (350)
T ss_pred hhhHHHHHHHHh
Confidence 666777788753
No 72
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.09 E-value=0.0033 Score=60.65 Aligned_cols=128 Identities=15% Similarity=0.096 Sum_probs=78.9
Q ss_pred CceEEEEEEEecCCCCCCCCCCCEEEEecCCCCh---hh-hhhhhhcccCeEEccCCcccccccccccCCCCcc-cccce
Q 012982 46 GSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGC---SS-MTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWN-RIFGL 120 (452)
Q Consensus 46 ~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~---SS-~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~-~~anl 120 (452)
..++|.|+++... ...+|+||.++|-.+- +. ++..+. . .+. .-.++
T Consensus 9 ~g~~~~~~~~p~~-----~~~~~~VlllHG~g~~~~~~~~~~~~la---~---------------------~La~~Gy~V 59 (266)
T TIGR03101 9 HGFRFCLYHPPVA-----VGPRGVVIYLPPFAEEMNKSRRMVALQA---R---------------------AFAAGGFGV 59 (266)
T ss_pred CCcEEEEEecCCC-----CCCceEEEEECCCcccccchhHHHHHHH---H---------------------HHHHCCCEE
Confidence 5678999987643 2247999999985331 11 111010 0 111 23678
Q ss_pred eeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCc
Q 012982 121 LFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSK 200 (452)
Q Consensus 121 lfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~ 200 (452)
+-+|. .|.|.|..... ..+.+...+|+..+ .+|++.. ...+++|+|+|+||..+..+|.+..+
T Consensus 60 l~~Dl-~G~G~S~g~~~---~~~~~~~~~Dv~~a-i~~L~~~---~~~~v~LvG~SmGG~vAl~~A~~~p~--------- 122 (266)
T TIGR03101 60 LQIDL-YGCGDSAGDFA---AARWDVWKEDVAAA-YRWLIEQ---GHPPVTLWGLRLGALLALDAANPLAA--------- 122 (266)
T ss_pred EEECC-CCCCCCCCccc---cCCHHHHHHHHHHH-HHHHHhc---CCCCEEEEEECHHHHHHHHHHHhCcc---------
Confidence 99995 59999943211 12445556776654 4455542 24689999999999887776644321
Q ss_pred eeecceeEecCCCCChhhhhh
Q 012982 201 RVNLQGVAIGNGLTDPATQVA 221 (452)
Q Consensus 201 ~inLkGi~igng~~~p~~q~~ 221 (452)
.++++++-++.++......
T Consensus 123 --~v~~lVL~~P~~~g~~~l~ 141 (266)
T TIGR03101 123 --KCNRLVLWQPVVSGKQQLQ 141 (266)
T ss_pred --ccceEEEeccccchHHHHH
Confidence 5778998888887654433
No 73
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=97.07 E-value=0.0048 Score=59.84 Aligned_cols=50 Identities=18% Similarity=0.128 Sum_probs=35.7
Q ss_pred eeEEEEeccCCccCCh-hhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCCC
Q 012982 345 TKVLLYQGHFDLRDGV-VSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQP 419 (452)
Q Consensus 345 irVliy~Gd~D~i~n~-~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dqP 419 (452)
.+++|.+|..|..++. ...+.+.+.++-.+ .+.++.++.|+||--..-.+
T Consensus 212 ~plli~~G~~D~~v~~~~~~~~~~~~l~~~g-------------------------~~v~~~~~~g~~H~f~~~~~ 262 (275)
T TIGR02821 212 STILIDQGTADQFLDEQLRPDAFEQACRAAG-------------------------QALTLRRQAGYDHSYYFIAS 262 (275)
T ss_pred CCeeEeecCCCcccCccccHHHHHHHHHHcC-------------------------CCeEEEEeCCCCccchhHHH
Confidence 5899999999999998 45666666654222 13468889999998765443
No 74
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=97.06 E-value=0.0016 Score=55.78 Aligned_cols=40 Identities=20% Similarity=0.211 Sum_probs=31.7
Q ss_pred eEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccc
Q 012982 346 KVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHL 413 (452)
Q Consensus 346 rVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHm 413 (452)
+|++.+|..|.+++....+.+.+++.. +-.+..|.+++|+
T Consensus 106 pv~~i~g~~D~~~~~~~~~~~~~~~~~----------------------------~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 106 PVLFIHGENDPLVPPEQVRRLYEALPG----------------------------PKELYIIPGAGHF 145 (145)
T ss_dssp EEEEEEETT-SSSHHHHHHHHHHHHCS----------------------------SEEEEEETTS-TT
T ss_pred cEEEEEECCCCcCCHHHHHHHHHHcCC----------------------------CcEEEEeCCCcCc
Confidence 999999999999999999888888751 1147999999996
No 75
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.98 E-value=0.0088 Score=57.42 Aligned_cols=125 Identities=21% Similarity=0.269 Sum_probs=70.0
Q ss_pred CceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCcccccc-----e
Q 012982 46 GSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFG-----L 120 (452)
Q Consensus 46 ~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~an-----l 120 (452)
+...-||+|.-... ++..||+|.|+|+=|..+..-++. .|++.|+ |
T Consensus 44 g~~r~y~l~vP~g~----~~~apLvv~LHG~~~sgag~~~~s-------------------------g~d~lAd~~gFlV 94 (312)
T COG3509 44 GLKRSYRLYVPPGL----PSGAPLVVVLHGSGGSGAGQLHGT-------------------------GWDALADREGFLV 94 (312)
T ss_pred CCccceEEEcCCCC----CCCCCEEEEEecCCCChHHhhccc-------------------------chhhhhcccCcEE
Confidence 56888999986542 556799999999877755432221 2333322 3
Q ss_pred eeeec------CCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcc
Q 012982 121 LFIDN------PIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNK 194 (452)
Q Consensus 121 lfiDq------PvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~ 194 (452)
+|-|+ +-+.|-++...+ .....++ +..+.+.+.....+| ......+||+|-|-||..+-.++-...+
T Consensus 95 ~yPdg~~~~wn~~~~~~~~~p~~--~~~g~dd-Vgflr~lva~l~~~~-gidp~RVyvtGlS~GG~Ma~~lac~~p~--- 167 (312)
T COG3509 95 AYPDGYDRAWNANGCGNWFGPAD--RRRGVDD-VGFLRALVAKLVNEY-GIDPARVYVTGLSNGGRMANRLACEYPD--- 167 (312)
T ss_pred ECcCccccccCCCcccccCCccc--ccCCccH-HHHHHHHHHHHHHhc-CcCcceEEEEeeCcHHHHHHHHHhcCcc---
Confidence 33321 445555543221 1222232 233334344444444 4456789999999999665554433222
Q ss_pred cCCCCceeecceeEecCCCC
Q 012982 195 QLPSSKRVNLQGVAIGNGLT 214 (452)
Q Consensus 195 ~~~~~~~inLkGi~igng~~ 214 (452)
-+.++++..|..
T Consensus 168 --------~faa~A~VAg~~ 179 (312)
T COG3509 168 --------IFAAIAPVAGLL 179 (312)
T ss_pred --------cccceeeeeccc
Confidence 466777766665
No 76
>PLN02442 S-formylglutathione hydrolase
Probab=96.87 E-value=0.0051 Score=59.99 Aligned_cols=56 Identities=18% Similarity=0.153 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCCh
Q 012982 147 VAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDP 216 (452)
Q Consensus 147 ~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p 216 (452)
..+++...+..+++. ....+++|+|.|+||.-+-.+|.+..+ .+++++..+|..++
T Consensus 125 ~~~~l~~~i~~~~~~---~~~~~~~i~G~S~GG~~a~~~a~~~p~-----------~~~~~~~~~~~~~~ 180 (283)
T PLN02442 125 VVKELPKLLSDNFDQ---LDTSRASIFGHSMGGHGALTIYLKNPD-----------KYKSVSAFAPIANP 180 (283)
T ss_pred HHHHHHHHHHHHHHh---cCCCceEEEEEChhHHHHHHHHHhCch-----------hEEEEEEECCccCc
Confidence 445555566666543 345679999999999766555543222 46788888888764
No 77
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=96.86 E-value=0.0037 Score=58.10 Aligned_cols=28 Identities=11% Similarity=-0.064 Sum_probs=24.6
Q ss_pred eEEEEeccCCccCChhhHHHHHhhcccc
Q 012982 346 KVLLYQGHFDLRDGVVSTEAWVKTMKWE 373 (452)
Q Consensus 346 rVliy~Gd~D~i~n~~g~~~~i~~l~w~ 373 (452)
+++|.+|..|.+||...++...+.++.-
T Consensus 170 ~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 170 IMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred eEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 5789999999999999999999888643
No 78
>PRK13604 luxD acyl transferase; Provisional
Probab=96.84 E-value=0.033 Score=54.63 Aligned_cols=46 Identities=7% Similarity=0.092 Sum_probs=38.3
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCC
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPT 416 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~ 416 (452)
+.|||+++|+.|-.||..+++.+.++++- ++..+..+.||+|....
T Consensus 202 ~~PvLiIHG~~D~lVp~~~s~~l~e~~~s---------------------------~~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 202 DIPFIAFTANNDSWVKQSEVIDLLDSIRS---------------------------EQCKLYSLIGSSHDLGE 247 (307)
T ss_pred CCCEEEEEcCCCCccCHHHHHHHHHHhcc---------------------------CCcEEEEeCCCccccCc
Confidence 48999999999999999999999988641 12248999999998764
No 79
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=96.75 E-value=0.012 Score=58.59 Aligned_cols=144 Identities=11% Similarity=0.162 Sum_probs=86.2
Q ss_pred eecCCCCCceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCcc-cc
Q 012982 39 LPVNPATGSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWN-RI 117 (452)
Q Consensus 39 l~v~~~~~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~-~~ 117 (452)
.+|.......++-+.|...... ....+|++|++|||=-|-+.- .. ....+-.++. +.
T Consensus 64 ~dv~~~~~~~l~vRly~P~~~~--~~~~~p~lvyfHGGGf~~~S~---------~~-----------~~y~~~~~~~a~~ 121 (336)
T KOG1515|consen 64 KDVTIDPFTNLPVRLYRPTSSS--SETKLPVLVYFHGGGFCLGSA---------NS-----------PAYDSFCTRLAAE 121 (336)
T ss_pred eeeEecCCCCeEEEEEcCCCCC--cccCceEEEEEeCCccEeCCC---------CC-----------chhHHHHHHHHHH
Confidence 3333334678999999876542 126899999999996553210 00 1111111222 44
Q ss_pred cceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHH-HhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccC
Q 012982 118 FGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITG-FINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQL 196 (452)
Q Consensus 118 anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~-f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~ 196 (452)
++.+-| .++|-.+. +..+|...++.-+.+.-++.+ |++..-+. ++++|+|.|-||..+-.+|.++.+..
T Consensus 122 ~~~vvv----SVdYRLAP-Eh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~--~rv~l~GDSaGGNia~~va~r~~~~~--- 191 (336)
T KOG1515|consen 122 LNCVVV----SVDYRLAP-EHPFPAAYDDGWAALKWVLKNSWLKLGADP--SRVFLAGDSAGGNIAHVVAQRAADEK--- 191 (336)
T ss_pred cCeEEE----ecCcccCC-CCCCCccchHHHHHHHHHHHhHHHHhCCCc--ccEEEEccCccHHHHHHHHHHHhhcc---
Confidence 444433 23444321 233555555544444444444 77654333 34999999999999999999998742
Q ss_pred CCCceeecceeEecCCCCCh
Q 012982 197 PSSKRVNLQGVAIGNGLTDP 216 (452)
Q Consensus 197 ~~~~~inLkGi~igng~~~p 216 (452)
...+.|+|.++..|+...
T Consensus 192 --~~~~ki~g~ili~P~~~~ 209 (336)
T KOG1515|consen 192 --LSKPKIKGQILIYPFFQG 209 (336)
T ss_pred --CCCcceEEEEEEecccCC
Confidence 124689999998887654
No 80
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.67 E-value=0.0016 Score=63.23 Aligned_cols=82 Identities=11% Similarity=0.075 Sum_probs=52.5
Q ss_pred cccceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhccc
Q 012982 116 RIFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQ 195 (452)
Q Consensus 116 ~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~ 195 (452)
...|++.||.+.+..-.|.. ...+...+++++.++|+...+.. .....+++|+|+|+||+.+-.+|.++.+
T Consensus 65 ~~~nVi~vD~~~~~~~~y~~----a~~~~~~v~~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~---- 135 (275)
T cd00707 65 GDYNVIVVDWGRGANPNYPQ----AVNNTRVVGAELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG---- 135 (275)
T ss_pred CCCEEEEEECccccccChHH----HHHhHHHHHHHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC----
Confidence 34889999976541111110 11234556777777776665532 3445689999999999998888876533
Q ss_pred CCCCceeecceeEecCCC
Q 012982 196 LPSSKRVNLQGVAIGNGL 213 (452)
Q Consensus 196 ~~~~~~inLkGi~igng~ 213 (452)
+++.|+..++.
T Consensus 136 -------~v~~iv~LDPa 146 (275)
T cd00707 136 -------KLGRITGLDPA 146 (275)
T ss_pred -------ccceeEEecCC
Confidence 46677766654
No 81
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=96.27 E-value=0.0092 Score=63.86 Aligned_cols=128 Identities=15% Similarity=0.155 Sum_probs=75.7
Q ss_pred CceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCc-ccccceeeee
Q 012982 46 GSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSW-NRIFGLLFID 124 (452)
Q Consensus 46 ~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW-~~~anllfiD 124 (452)
+..|+...|.... .+..|+||.++|-...+.... +.. . ....-| .+-..+|-+|
T Consensus 6 G~~L~~~~~~P~~-----~~~~P~Il~~~gyg~~~~~~~-----~~~--------------~-~~~~~l~~~Gy~vv~~D 60 (550)
T TIGR00976 6 GTRLAIDVYRPAG-----GGPVPVILSRTPYGKDAGLRW-----GLD--------------K-TEPAWFVAQGYAVVIQD 60 (550)
T ss_pred CCEEEEEEEecCC-----CCCCCEEEEecCCCCchhhcc-----ccc--------------c-ccHHHHHhCCcEEEEEe
Confidence 6788887776432 236799999996533221100 000 0 000012 2346799999
Q ss_pred cCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeec
Q 012982 125 NPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNL 204 (452)
Q Consensus 125 qPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inL 204 (452)
..|.|.|..... ..+ .+.++|+.+++ +|+.+.| +.+.++.++|.||||..+-.+|. ... -.|
T Consensus 61 -~RG~g~S~g~~~---~~~-~~~~~D~~~~i-~~l~~q~-~~~~~v~~~G~S~GG~~a~~~a~----~~~-------~~l 122 (550)
T TIGR00976 61 -TRGRGASEGEFD---LLG-SDEAADGYDLV-DWIAKQP-WCDGNVGMLGVSYLAVTQLLAAV----LQP-------PAL 122 (550)
T ss_pred -ccccccCCCceE---ecC-cccchHHHHHH-HHHHhCC-CCCCcEEEEEeChHHHHHHHHhc----cCC-------Cce
Confidence 789999953211 111 34567776644 4776655 34568999999999965444442 111 268
Q ss_pred ceeEecCCCCCh
Q 012982 205 QGVAIGNGLTDP 216 (452)
Q Consensus 205 kGi~igng~~~p 216 (452)
++++..++..+.
T Consensus 123 ~aiv~~~~~~d~ 134 (550)
T TIGR00976 123 RAIAPQEGVWDL 134 (550)
T ss_pred eEEeecCcccch
Confidence 999988887664
No 82
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=96.11 E-value=0.022 Score=46.62 Aligned_cols=63 Identities=24% Similarity=0.225 Sum_probs=52.3
Q ss_pred eeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCCCHHHHH
Q 012982 345 TKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQPLNSQI 424 (452)
Q Consensus 345 irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dqP~~~~~ 424 (452)
.+||+.+|..|.++|+.++++..+.|.- -..+++.+.||-+....-.-+.+
T Consensus 35 ~piL~l~~~~Dp~TP~~~a~~~~~~l~~-----------------------------s~lvt~~g~gHg~~~~~s~C~~~ 85 (103)
T PF08386_consen 35 PPILVLGGTHDPVTPYEGARAMAARLPG-----------------------------SRLVTVDGAGHGVYAGGSPCVDK 85 (103)
T ss_pred CCEEEEecCcCCCCcHHHHHHHHHHCCC-----------------------------ceEEEEeccCcceecCCChHHHH
Confidence 7999999999999999999999998741 14899999999999755556788
Q ss_pred HHHHHHcCCCcc
Q 012982 425 MIEDWVLDKGLF 436 (452)
Q Consensus 425 ~i~~fl~~~~~~ 436 (452)
++++|+....+-
T Consensus 86 ~v~~yl~~G~lP 97 (103)
T PF08386_consen 86 AVDDYLLDGTLP 97 (103)
T ss_pred HHHHHHHcCCCC
Confidence 999998754443
No 83
>PRK10162 acetyl esterase; Provisional
Probab=95.95 E-value=0.017 Score=57.23 Aligned_cols=46 Identities=17% Similarity=0.160 Sum_probs=34.1
Q ss_pred CCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCCh
Q 012982 166 KNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDP 216 (452)
Q Consensus 166 ~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p 216 (452)
...++.|+|+|.||..+..+|.++.+... ....++|+++..|+.+.
T Consensus 152 d~~~i~l~G~SaGG~la~~~a~~~~~~~~-----~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 152 NMSRIGFAGDSAGAMLALASALWLRDKQI-----DCGKVAGVLLWYGLYGL 197 (318)
T ss_pred ChhHEEEEEECHHHHHHHHHHHHHHhcCC-----CccChhheEEECCccCC
Confidence 35689999999999999988877755321 12357888888887663
No 84
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=95.88 E-value=0.22 Score=48.75 Aligned_cols=66 Identities=27% Similarity=0.278 Sum_probs=48.4
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccC--CCCCHH
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVP--TDQPLN 421 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp--~dqP~~ 421 (452)
+.+|+||+|..|.++|+..++..++++--.|. .+++|.++.+++|+.. ...|++
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~------------------------a~V~~~~~~~~~H~~~~~~~~~~a 274 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGG------------------------ADVEYVRYPGGGHLGAAFASAPDA 274 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCC------------------------CCEEEEecCCCChhhhhhcCcHHH
Confidence 47999999999999999999999988753331 2467899999999965 456655
Q ss_pred HHHHHHHHHcCCC
Q 012982 422 SQIMIEDWVLDKG 434 (452)
Q Consensus 422 ~~~~i~~fl~~~~ 434 (452)
.. -|++-+.|++
T Consensus 275 ~~-Wl~~rf~G~~ 286 (290)
T PF03583_consen 275 LA-WLDDRFAGKP 286 (290)
T ss_pred HH-HHHHHHCCCC
Confidence 44 4444444544
No 85
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=95.75 E-value=0.59 Score=49.04 Aligned_cols=83 Identities=17% Similarity=0.193 Sum_probs=58.2
Q ss_pred HHHHHHHhc-eeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCcccc
Q 012982 336 FMVEFLVRN-TKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLV 414 (452)
Q Consensus 336 ~~l~~Ll~~-irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmv 414 (452)
+.|....++ -|+|+|||..|.++|..++.++.+++.-..... ..++..++ .|..|+|.||--
T Consensus 344 pDLsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~-----------~~~v~dF~------RlF~vPGm~HC~ 406 (474)
T PF07519_consen 344 PDLSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGA-----------LADVDDFY------RLFMVPGMGHCG 406 (474)
T ss_pred cCHHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccc-----------ccccccee------EEEecCCCcccC
Confidence 445555554 799999999999999999999998874221100 01233444 489999999984
Q ss_pred C--CCCCHHHHHHHHHHHcCCCc
Q 012982 415 P--TDQPLNSQIMIEDWVLDKGL 435 (452)
Q Consensus 415 p--~dqP~~~~~~i~~fl~~~~~ 435 (452)
- -..|-.++..|.+|+.+...
T Consensus 407 gG~g~~~~d~l~aL~~WVE~G~A 429 (474)
T PF07519_consen 407 GGPGPDPFDALTALVDWVENGKA 429 (474)
T ss_pred CCCCCCCCCHHHHHHHHHhCCCC
Confidence 4 34666788888899974443
No 86
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=95.54 E-value=0.052 Score=50.56 Aligned_cols=102 Identities=18% Similarity=0.264 Sum_probs=68.7
Q ss_pred EEEEecCCCChhhhhhhhhc-ccCeEEccCCcccccccccccCCCCcccccceeeeecCCCcceeeccCCCCCCCChHHH
Q 012982 69 LLIWLQGGPGCSSMTGNFLE-LGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQISV 147 (452)
Q Consensus 69 lilWlnGGPG~SS~~g~f~e-~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~ 147 (452)
-+|++++|=|+++.+--+.. +++ . ..++..|+.| |-+ .......+.++.
T Consensus 2 ~lf~~p~~gG~~~~y~~la~~l~~-----------------------~-~~~v~~i~~~-~~~-----~~~~~~~si~~l 51 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYRPLARALPD-----------------------D-VIGVYGIEYP-GRG-----DDEPPPDSIEEL 51 (229)
T ss_dssp EEEEESSTTCSGGGGHHHHHHHTT-----------------------T-EEEEEEECST-TSC-----TTSHEESSHHHH
T ss_pred eEEEEcCCccCHHHHHHHHHhCCC-----------------------C-eEEEEEEecC-CCC-----CCCCCCCCHHHH
Confidence 47888988787666533321 111 0 3557778844 555 112245678888
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCC
Q 012982 148 AKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLT 214 (452)
Q Consensus 148 a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~ 214 (452)
|++..+.|+.-. | ..|++|+|.|+||..+=.+|.+|.++. ..+..+++.++..
T Consensus 52 a~~y~~~I~~~~---~---~gp~~L~G~S~Gg~lA~E~A~~Le~~G--------~~v~~l~liD~~~ 104 (229)
T PF00975_consen 52 ASRYAEAIRARQ---P---EGPYVLAGWSFGGILAFEMARQLEEAG--------EEVSRLILIDSPP 104 (229)
T ss_dssp HHHHHHHHHHHT---S---SSSEEEEEETHHHHHHHHHHHHHHHTT---------SESEEEEESCSS
T ss_pred HHHHHHHhhhhC---C---CCCeeehccCccHHHHHHHHHHHHHhh--------hccCceEEecCCC
Confidence 888877776443 2 239999999999999999999988764 3677888888653
No 87
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=95.44 E-value=0.097 Score=54.03 Aligned_cols=68 Identities=10% Similarity=-0.007 Sum_probs=45.4
Q ss_pred ccceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHH
Q 012982 117 IFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFI 189 (452)
Q Consensus 117 ~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i 189 (452)
.+|||-+|.| |-|-|.... ...+...+|+++.++|+...+.. .+.-.+++|+|+|.||+.+-.+|.+.
T Consensus 73 d~nVI~VDw~-g~g~s~y~~---a~~~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~ 140 (442)
T TIGR03230 73 SANVIVVDWL-SRAQQHYPT---SAAYTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLT 140 (442)
T ss_pred CCEEEEEECC-CcCCCCCcc---ccccHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhC
Confidence 4799999976 444442111 12244667888887776554332 35567899999999999888777543
No 88
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.36 E-value=0.12 Score=48.59 Aligned_cols=64 Identities=20% Similarity=0.274 Sum_probs=45.6
Q ss_pred ceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHh
Q 012982 119 GLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQ 192 (452)
Q Consensus 119 nllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~ 192 (452)
.++=|+.| |=|--+. ....++.++.|+.+...|+. -+..+|+-++|+|+||+.+=.+|.++.+.
T Consensus 35 el~avqlP-GR~~r~~---ep~~~di~~Lad~la~el~~------~~~d~P~alfGHSmGa~lAfEvArrl~~~ 98 (244)
T COG3208 35 ELLAVQLP-GRGDRFG---EPLLTDIESLADELANELLP------PLLDAPFALFGHSMGAMLAFEVARRLERA 98 (244)
T ss_pred heeeecCC-CcccccC---CcccccHHHHHHHHHHHhcc------ccCCCCeeecccchhHHHHHHHHHHHHHc
Confidence 46667755 5553322 23456788888888776653 25588999999999999888888888664
No 89
>PLN00021 chlorophyllase
Probab=95.25 E-value=0.14 Score=50.65 Aligned_cols=61 Identities=11% Similarity=0.026 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHhhh-CC---CCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCC
Q 012982 148 AKHLFAAITGFINL-DP---LFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLT 214 (452)
Q Consensus 148 a~d~~~fL~~f~~~-fp---~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~ 214 (452)
+.++.+++.+-++. .| +...++++|+|+|.||..+-.+|.+..+.. ....+++++..+++.
T Consensus 102 ~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~------~~~~v~ali~ldPv~ 166 (313)
T PLN00021 102 AAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVS------LPLKFSALIGLDPVD 166 (313)
T ss_pred HHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccc------cccceeeEEeecccc
Confidence 44555555543322 11 233468999999999988777776554321 124678888777764
No 90
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=95.03 E-value=0.093 Score=49.12 Aligned_cols=40 Identities=20% Similarity=0.291 Sum_probs=29.2
Q ss_pred CCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCC
Q 012982 164 LFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLT 214 (452)
Q Consensus 164 ~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~ 214 (452)
..-.+++|++|.|-||.....++....+ .+.++++..|..
T Consensus 93 ~iD~~RVyv~G~S~Gg~ma~~la~~~pd-----------~faa~a~~sG~~ 132 (220)
T PF10503_consen 93 NIDPSRVYVTGLSNGGMMANVLACAYPD-----------LFAAVAVVSGVP 132 (220)
T ss_pred ccCCCceeeEEECHHHHHHHHHHHhCCc-----------cceEEEeecccc
Confidence 4557799999999999666666654433 577888877763
No 91
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=94.59 E-value=0.51 Score=47.87 Aligned_cols=109 Identities=19% Similarity=0.259 Sum_probs=69.7
Q ss_pred CCCCCEEEEecCCCChhhh------hhhhhcccCeEEccCCcccccccccccCCCCcccccceeeeecCCCcceeeccCC
Q 012982 64 LSQTPLLIWLQGGPGCSSM------TGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDNPIGAGFSFAATN 137 (452)
Q Consensus 64 ~~~~PlilWlnGGPG~SS~------~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~ 137 (452)
..++|+++.+.|=.|.|.- ....++.| +++. -.. ++|.|-|-.+++
T Consensus 122 ~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r~V--------------------------VfN-~RG~~g~~LtTp 173 (409)
T KOG1838|consen 122 DGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YRVV--------------------------VFN-HRGLGGSKLTTP 173 (409)
T ss_pred CCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cEEE--------------------------EEC-CCCCCCCccCCC
Confidence 4578999999999988753 34445566 4332 122 899999976655
Q ss_pred CCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCC
Q 012982 138 DEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLT 214 (452)
Q Consensus 138 ~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~ 214 (452)
.-+.... .+|+.++++---++|| .+++|.+|.|+||.. +.+++-|..++ . --..|++|-|||-
T Consensus 174 r~f~ag~---t~Dl~~~v~~i~~~~P---~a~l~avG~S~Gg~i---L~nYLGE~g~~----~-~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 174 RLFTAGW---TEDLREVVNHIKKRYP---QAPLFAVGFSMGGNI---LTNYLGEEGDN----T-PLIAAVAVCNPWD 236 (409)
T ss_pred ceeecCC---HHHHHHHHHHHHHhCC---CCceEEEEecchHHH---HHHHhhhccCC----C-CceeEEEEeccch
Confidence 4332221 3455554444445666 569999999999954 55666665432 1 1356788888883
No 92
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=94.58 E-value=0.012 Score=59.69 Aligned_cols=79 Identities=22% Similarity=0.281 Sum_probs=50.9
Q ss_pred cceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCC
Q 012982 118 FGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLP 197 (452)
Q Consensus 118 anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~ 197 (452)
..||-||-| |||+|.. .+.+.+ .+.++..+..|+...|+.-..++.++|-|.||.|++.+|.-=.+
T Consensus 219 iA~LtvDmP-G~G~s~~-----~~l~~D--~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~------ 284 (411)
T PF06500_consen 219 IAMLTVDMP-GQGESPK-----WPLTQD--SSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDP------ 284 (411)
T ss_dssp -EEEEE--T-TSGGGTT-----T-S-S---CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTT------
T ss_pred CEEEEEccC-CCccccc-----CCCCcC--HHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhccc------
Confidence 458999977 9999932 122221 24566778888888898888999999999999998887732211
Q ss_pred CCceeecceeEecCCCCC
Q 012982 198 SSKRVNLQGVAIGNGLTD 215 (452)
Q Consensus 198 ~~~~inLkGi~igng~~~ 215 (452)
.|||++.-.+.++
T Consensus 285 -----RlkavV~~Ga~vh 297 (411)
T PF06500_consen 285 -----RLKAVVALGAPVH 297 (411)
T ss_dssp -----T-SEEEEES---S
T ss_pred -----ceeeEeeeCchHh
Confidence 6888775444443
No 93
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=94.58 E-value=0.27 Score=47.44 Aligned_cols=116 Identities=22% Similarity=0.272 Sum_probs=72.1
Q ss_pred CCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCcccccceeeeecCCCcceeeccCC-----CCCC
Q 012982 67 TPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDNPIGAGFSFAATN-----DEIP 141 (452)
Q Consensus 67 ~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~-----~~~~ 141 (452)
+++++|+-|-||.-..+--|.+. +..+- +....++=|. =.|+|..... ....
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~-----------------L~~~l---~~~~~i~~is---h~Gh~~~~~~~~~~~~~~~ 58 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSA-----------------LYEKL---NPQFEILGIS---HAGHSTSPSNSKFSPNGRL 58 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHH-----------------HHHhC---CCCCeeEEec---CCCCcCCcccccccCCCCc
Confidence 58999999999999987555421 11110 3344455455 2345443322 2334
Q ss_pred CChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCC
Q 012982 142 RDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLT 214 (452)
Q Consensus 142 ~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~ 214 (452)
.+.++..+.-.+||+++....+ ..+.+++|.|+|-|+ +++.+++++.. ....+++++++--|-+
T Consensus 59 ~sL~~QI~hk~~~i~~~~~~~~-~~~~~liLiGHSIGa----yi~levl~r~~----~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 59 FSLQDQIEHKIDFIKELIPQKN-KPNVKLILIGHSIGA----YIALEVLKRLP----DLKFRVKKVILLFPTI 122 (266)
T ss_pred cCHHHHHHHHHHHHHHHhhhhc-CCCCcEEEEeCcHHH----HHHHHHHHhcc----ccCCceeEEEEeCCcc
Confidence 5777777788899999987543 257899999999999 55556665542 1124666666544443
No 94
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=94.35 E-value=0.08 Score=48.68 Aligned_cols=121 Identities=15% Similarity=0.226 Sum_probs=76.5
Q ss_pred CceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCcccccceeeeec
Q 012982 46 GSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDN 125 (452)
Q Consensus 46 ~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDq 125 (452)
...+.=|...+++ ++|++|.|+|--|- .|++.-+ .. .... +=..||+-||
T Consensus 64 ~vtL~a~~~~~E~-------S~pTlLyfh~NAGN---mGhr~~i------~~--------~fy~-----~l~mnv~ivs- 113 (300)
T KOG4391|consen 64 KVTLDAYLMLSES-------SRPTLLYFHANAGN---MGHRLPI------AR--------VFYV-----NLKMNVLIVS- 113 (300)
T ss_pred ceeEeeeeecccC-------CCceEEEEccCCCc---ccchhhH------HH--------HHHH-----HcCceEEEEE-
Confidence 4555555555433 68999999987664 2222211 00 0000 2346788899
Q ss_pred CCCcceeeccCC-CCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeec
Q 012982 126 PIGAGFSFAATN-DEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNL 204 (452)
Q Consensus 126 PvGtGfSy~~~~-~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inL 204 (452)
=+|-|.|..... .+...+ . ++..+++-.+|....+++.|+|.|-||.-+-.+|.+-.+ .+
T Consensus 114 YRGYG~S~GspsE~GL~lD-s-------~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~-----------ri 174 (300)
T KOG4391|consen 114 YRGYGKSEGSPSEEGLKLD-S-------EAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD-----------RI 174 (300)
T ss_pred eeccccCCCCccccceecc-H-------HHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchh-----------he
Confidence 889999965422 122222 2 234455566889999999999999999777766654433 67
Q ss_pred ceeEecCCCCC
Q 012982 205 QGVAIGNGLTD 215 (452)
Q Consensus 205 kGi~igng~~~ 215 (452)
.++++.|-+++
T Consensus 175 ~~~ivENTF~S 185 (300)
T KOG4391|consen 175 SAIIVENTFLS 185 (300)
T ss_pred eeeeeechhcc
Confidence 78998887754
No 95
>COG1647 Esterase/lipase [General function prediction only]
Probab=94.17 E-value=0.78 Score=42.56 Aligned_cols=60 Identities=17% Similarity=0.148 Sum_probs=49.6
Q ss_pred eeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCC-CCHHHH
Q 012982 345 TKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTD-QPLNSQ 423 (452)
Q Consensus 345 irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~d-qP~~~~ 423 (452)
.+++|..|..|-.+|..+++...+++.-..++ ..+..++||-+-.| +.+...
T Consensus 182 ~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~Ke---------------------------L~~~e~SgHVIt~D~Erd~v~ 234 (243)
T COG1647 182 SPTLVVQGRQDEMVPAESANFIYDHVESDDKE---------------------------LKWLEGSGHVITLDKERDQVE 234 (243)
T ss_pred cchhheecccCCCCCHHHHHHHHHhccCCcce---------------------------eEEEccCCceeecchhHHHHH
Confidence 69999999999999999999999988644332 67899999999998 455577
Q ss_pred HHHHHHHc
Q 012982 424 IMIEDWVL 431 (452)
Q Consensus 424 ~~i~~fl~ 431 (452)
+.+-+||.
T Consensus 235 e~V~~FL~ 242 (243)
T COG1647 235 EDVITFLE 242 (243)
T ss_pred HHHHHHhh
Confidence 77777875
No 96
>PRK11460 putative hydrolase; Provisional
Probab=94.01 E-value=0.21 Score=47.09 Aligned_cols=62 Identities=19% Similarity=0.085 Sum_probs=46.9
Q ss_pred eeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCCCHHHHH
Q 012982 345 TKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQPLNSQI 424 (452)
Q Consensus 345 irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dqP~~~~~ 424 (452)
.+|++.+|..|.++|...+++..+.|+-.+ .+.++.+++++||.+..+.-+.+.+
T Consensus 149 ~pvli~hG~~D~vvp~~~~~~~~~~L~~~g-------------------------~~~~~~~~~~~gH~i~~~~~~~~~~ 203 (232)
T PRK11460 149 TTIHLIHGGEDPVIDVAHAVAAQEALISLG-------------------------GDVTLDIVEDLGHAIDPRLMQFALD 203 (232)
T ss_pred CcEEEEecCCCCccCHHHHHHHHHHHHHCC-------------------------CCeEEEEECCCCCCCCHHHHHHHHH
Confidence 589999999999999999998888875221 1346888899999997655555555
Q ss_pred HHHHHHc
Q 012982 425 MIEDWVL 431 (452)
Q Consensus 425 ~i~~fl~ 431 (452)
-|++++.
T Consensus 204 ~l~~~l~ 210 (232)
T PRK11460 204 RLRYTVP 210 (232)
T ss_pred HHHHHcc
Confidence 5665553
No 97
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=93.99 E-value=0.71 Score=44.65 Aligned_cols=63 Identities=17% Similarity=0.122 Sum_probs=43.5
Q ss_pred eeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCCCHHHHH
Q 012982 345 TKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQPLNSQI 424 (452)
Q Consensus 345 irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dqP~~~~~ 424 (452)
.|||++.|+.-.-. ..+...-.+|+= .+-|++.|.++|=||-.+||+...+
T Consensus 220 c~vLlvvG~~Sp~~--~~vv~~ns~Ldp---------------------------~~ttllkv~dcGglV~eEqP~klae 270 (283)
T PF03096_consen 220 CPVLLVVGDNSPHV--DDVVEMNSKLDP---------------------------TKTTLLKVADCGGLVLEEQPGKLAE 270 (283)
T ss_dssp S-EEEEEETTSTTH--HHHHHHHHHS-C---------------------------CCEEEEEETT-TT-HHHH-HHHHHH
T ss_pred CCeEEEEecCCcch--hhHHHHHhhcCc---------------------------ccceEEEecccCCcccccCcHHHHH
Confidence 79999999876544 223334444421 1337999999999999999999999
Q ss_pred HHHHHHcCCCcc
Q 012982 425 MIEDWVLDKGLF 436 (452)
Q Consensus 425 ~i~~fl~~~~~~ 436 (452)
.|+-|+.|-+++
T Consensus 271 a~~lFlQG~G~~ 282 (283)
T PF03096_consen 271 AFKLFLQGMGYL 282 (283)
T ss_dssp HHHHHHHHTTB-
T ss_pred HHHHHHccCCcC
Confidence 999999998765
No 98
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=93.88 E-value=1.8 Score=41.94 Aligned_cols=37 Identities=16% Similarity=0.248 Sum_probs=34.1
Q ss_pred EEEEEEcCCccccCCCCCHHHHHHHHHHHcCCCcccc
Q 012982 402 LSHVVVLGAGHLVPTDQPLNSQIMIEDWVLDKGLFAA 438 (452)
Q Consensus 402 ltf~~V~~AGHmvp~dqP~~~~~~i~~fl~~~~~~~~ 438 (452)
-|++.|.++|-++..+||.+..+-|+-|+.|-+++.+
T Consensus 275 ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~Gy~~s 311 (326)
T KOG2931|consen 275 TTLLKMADCGGLVQEEQPGKLAEAFKYFLQGMGYLPS 311 (326)
T ss_pred ceEEEEcccCCcccccCchHHHHHHHHHHccCCcccc
Confidence 4789999999999999999999999999999999844
No 99
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=93.21 E-value=0.31 Score=51.53 Aligned_cols=117 Identities=19% Similarity=0.211 Sum_probs=67.2
Q ss_pred CCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCcccccc----------eeeeecCCCcceee
Q 012982 64 LSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFG----------LLFIDNPIGAGFSF 133 (452)
Q Consensus 64 ~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~an----------llfiDqPvGtGfSy 133 (452)
-+..|+++..-||||. .++.|.++|.+... |++|| =+|+----
T Consensus 639 gkkYptvl~VYGGP~V--------------------------QlVnnsfkgi~ylR~~~LaslGy~Vv~ID-nRGS~hRG 691 (867)
T KOG2281|consen 639 GKKYPTVLNVYGGPGV--------------------------QLVNNSFKGIQYLRFCRLASLGYVVVFID-NRGSAHRG 691 (867)
T ss_pred CCCCceEEEEcCCCce--------------------------EEeeccccceehhhhhhhhhcceEEEEEc-CCCccccc
Confidence 3458999999999997 78888888887543 68999 55543110
Q ss_pred ccCCCCCCCChHHH-HHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCC
Q 012982 134 AATNDEIPRDQISV-AKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNG 212 (452)
Q Consensus 134 ~~~~~~~~~~~~~~-a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng 212 (452)
-.=.+.+....-++ ++|=.+.||-..++.--..-.++-|-|-||||. ++...+.+-.+ -++..+-|.+
T Consensus 692 lkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGY----LSlm~L~~~P~-------IfrvAIAGap 760 (867)
T KOG2281|consen 692 LKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGY----LSLMGLAQYPN-------IFRVAIAGAP 760 (867)
T ss_pred hhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccH----HHHHHhhcCcc-------eeeEEeccCc
Confidence 00000011111111 223335455444443112245799999999994 44444443221 3566667888
Q ss_pred CCChhh
Q 012982 213 LTDPAT 218 (452)
Q Consensus 213 ~~~p~~ 218 (452)
+++...
T Consensus 761 VT~W~~ 766 (867)
T KOG2281|consen 761 VTDWRL 766 (867)
T ss_pred ceeeee
Confidence 887753
No 100
>COG4099 Predicted peptidase [General function prediction only]
Probab=93.20 E-value=1.6 Score=42.26 Aligned_cols=121 Identities=17% Similarity=0.170 Sum_probs=63.3
Q ss_pred CCceEEEEEEEecCCCCCCCCCCCEEEEecCCC-Chhhhh-hhhhcccCeEEccCCcccccccccccCCCCcccccceee
Q 012982 45 TGSAIFYAYYEAQTPITSSLSQTPLLIWLQGGP-GCSSMT-GNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLF 122 (452)
Q Consensus 45 ~~~~lfy~~~es~~~~~~~~~~~PlilWlnGGP-G~SS~~-g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllf 122 (452)
.+.++=|-+|..+.-.. +.+..||+|||||+= |.+--. -+.+..|-.-...... . .|
T Consensus 170 tgneLkYrly~Pkdy~p-dkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~ped------q--------------cf 228 (387)
T COG4099 170 TGNELKYRLYTPKDYAP-DKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPED------Q--------------CF 228 (387)
T ss_pred cCceeeEEEecccccCC-CCccccEEEEEecCCCCCchhhhhhhcCccceeeecccC------c--------------eE
Confidence 47789999998754322 455569999999863 333222 2333344443321110 0 22
Q ss_pred eecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHH
Q 012982 123 IDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILK 191 (452)
Q Consensus 123 iDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~ 191 (452)
|=.|- |+-.-+.++. ..+..-....+.+.+=+..++..-.+++|++|-|-||.-.-+++.+..+
T Consensus 229 VlAPQ---y~~if~d~e~--~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPd 292 (387)
T COG4099 229 VLAPQ---YNPIFADSEE--KTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPD 292 (387)
T ss_pred EEccc---cccccccccc--ccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCch
Confidence 22222 1110000111 1111122233444444455667778999999999999877666666554
No 101
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=92.90 E-value=0.25 Score=51.94 Aligned_cols=37 Identities=19% Similarity=0.071 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHH
Q 012982 149 KHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIG 186 (452)
Q Consensus 149 ~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA 186 (452)
....+++++-...|. -..+++.|+|+|.||+.+-.++
T Consensus 158 ~~al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~~ 194 (493)
T cd00312 158 RLALKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLLL 194 (493)
T ss_pred HHHHHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhHh
Confidence 344566777766662 4567899999999997654443
No 102
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=92.82 E-value=0.21 Score=45.48 Aligned_cols=60 Identities=12% Similarity=0.064 Sum_probs=43.7
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCCCHHHH
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQPLNSQ 423 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dqP~~~~ 423 (452)
+++.||.||..|-.|+-..+- ||..+. ..-.+-...+.+|..+..-|++..
T Consensus 216 kcPtli~hG~kDp~~~~~hv~-fi~~~~----------------------------~~a~~~~~peGkHn~hLrya~eFn 266 (277)
T KOG2984|consen 216 KCPTLIMHGGKDPFCGDPHVC-FIPVLK----------------------------SLAKVEIHPEGKHNFHLRYAKEFN 266 (277)
T ss_pred cCCeeEeeCCcCCCCCCCCcc-chhhhc----------------------------ccceEEEccCCCcceeeechHHHH
Confidence 489999999999999544331 111110 011245678899999999999999
Q ss_pred HHHHHHHcC
Q 012982 424 IMIEDWVLD 432 (452)
Q Consensus 424 ~~i~~fl~~ 432 (452)
.++.+|++.
T Consensus 267 klv~dFl~~ 275 (277)
T KOG2984|consen 267 KLVLDFLKS 275 (277)
T ss_pred HHHHHHHhc
Confidence 999999864
No 103
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=92.19 E-value=1.7 Score=42.64 Aligned_cols=47 Identities=15% Similarity=0.123 Sum_probs=37.4
Q ss_pred CCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCChhh
Q 012982 165 FKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDPAT 218 (452)
Q Consensus 165 ~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p~~ 218 (452)
...+++.|+|+|-||+.+..+|....+... ...++.++..+++|...
T Consensus 149 ~dp~~i~v~GdSAGG~La~~~a~~~~~~~~-------~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 149 IDPSRIAVAGDSAGGHLALALALAARDRGL-------PLPAAQVLISPLLDLTS 195 (312)
T ss_pred CCccceEEEecCcccHHHHHHHHHHHhcCC-------CCceEEEEEecccCCcc
Confidence 346789999999999999999988877521 35678888888888754
No 104
>PRK11460 putative hydrolase; Provisional
Probab=91.53 E-value=0.28 Score=46.24 Aligned_cols=37 Identities=5% Similarity=-0.080 Sum_probs=23.3
Q ss_pred HHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHH
Q 012982 150 HLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGY 187 (452)
Q Consensus 150 d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~ 187 (452)
.+.++++.+.++. ....++++|+|.|.||..+-.++.
T Consensus 86 ~l~~~i~~~~~~~-~~~~~~i~l~GfS~Gg~~al~~a~ 122 (232)
T PRK11460 86 TFIETVRYWQQQS-GVGASATALIGFSQGAIMALEAVK 122 (232)
T ss_pred HHHHHHHHHHHhc-CCChhhEEEEEECHHHHHHHHHHH
Confidence 3444444443332 345678999999999977655543
No 105
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=91.10 E-value=0.45 Score=43.35 Aligned_cols=50 Identities=18% Similarity=0.256 Sum_probs=35.1
Q ss_pred HHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCChhhhhh
Q 012982 155 ITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDPATQVA 221 (452)
Q Consensus 155 L~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p~~q~~ 221 (452)
+.+.++. .....+.|+|-|.||.|+..+|.+. +++. ++.||.+.|...++
T Consensus 49 l~~~i~~---~~~~~~~liGSSlGG~~A~~La~~~-------------~~~a-vLiNPav~p~~~l~ 98 (187)
T PF05728_consen 49 LEQLIEE---LKPENVVLIGSSLGGFYATYLAERY-------------GLPA-VLINPAVRPYELLQ 98 (187)
T ss_pred HHHHHHh---CCCCCeEEEEEChHHHHHHHHHHHh-------------CCCE-EEEcCCCCHHHHHH
Confidence 4444443 3344599999999999988887655 4555 67799998865433
No 106
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=91.02 E-value=0.15 Score=49.32 Aligned_cols=82 Identities=20% Similarity=0.182 Sum_probs=54.3
Q ss_pred cceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCC
Q 012982 118 FGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLP 197 (452)
Q Consensus 118 anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~ 197 (452)
..+|.+| .+|+|-|...- .....+-++|.++ +.+|+...| ..+-++-++|.||+|......|..-
T Consensus 58 Y~vV~~D-~RG~g~S~G~~----~~~~~~e~~D~~d-~I~W~~~Qp-ws~G~VGm~G~SY~G~~q~~~A~~~-------- 122 (272)
T PF02129_consen 58 YAVVVQD-VRGTGGSEGEF----DPMSPNEAQDGYD-TIEWIAAQP-WSNGKVGMYGISYGGFTQWAAAARR-------- 122 (272)
T ss_dssp -EEEEEE--TTSTTS-S-B-----TTSHHHHHHHHH-HHHHHHHCT-TEEEEEEEEEETHHHHHHHHHHTTT--------
T ss_pred CEEEEEC-CcccccCCCcc----ccCChhHHHHHHH-HHHHHHhCC-CCCCeEEeeccCHHHHHHHHHHhcC--------
Confidence 4588999 99999995432 1114556777777 777887765 4455899999999997766665411
Q ss_pred CCceeecceeEecCCCCChh
Q 012982 198 SSKRVNLQGVAIGNGLTDPA 217 (452)
Q Consensus 198 ~~~~inLkGi~igng~~~p~ 217 (452)
.-.||.|+...+..|..
T Consensus 123 ---~p~LkAi~p~~~~~d~~ 139 (272)
T PF02129_consen 123 ---PPHLKAIVPQSGWSDLY 139 (272)
T ss_dssp ----TTEEEEEEESE-SBTC
T ss_pred ---CCCceEEEecccCCccc
Confidence 12689998877776643
No 107
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=90.85 E-value=0.57 Score=48.53 Aligned_cols=95 Identities=12% Similarity=-0.011 Sum_probs=52.6
Q ss_pred ceeeeecCCCcceeeccCC---CCCC-CChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcc
Q 012982 119 GLLFIDNPIGAGFSFAATN---DEIP-RDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNK 194 (452)
Q Consensus 119 nllfiDqPvGtGfSy~~~~---~~~~-~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~ 194 (452)
-||+++ -+==|-|..... .... -+.+|+-.|+..|++.+-.++....+.|+.++|-||||..+.-+-.+..+
T Consensus 61 ~~v~lE-HRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~--- 136 (434)
T PF05577_consen 61 LVVALE-HRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPH--- 136 (434)
T ss_dssp EEEEE---TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TT---
T ss_pred cEEEee-hhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCC---
Confidence 355555 455555543111 1111 36789999999999988877766678899999999999554444333322
Q ss_pred cCCCCceeecceeEecCCCCChhhhhhhhHH
Q 012982 195 QLPSSKRVNLQGVAIGNGLTDPATQVATHAL 225 (452)
Q Consensus 195 ~~~~~~~inLkGi~igng~~~p~~q~~~~~~ 225 (452)
-+.|.+--.+.+.....+..|.+
T Consensus 137 --------~~~ga~ASSapv~a~~df~~y~~ 159 (434)
T PF05577_consen 137 --------LFDGAWASSAPVQAKVDFWEYFE 159 (434)
T ss_dssp --------T-SEEEEET--CCHCCTTTHHHH
T ss_pred --------eeEEEEeccceeeeecccHHHHH
Confidence 24566666666655544444433
No 108
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=90.53 E-value=0.68 Score=42.94 Aligned_cols=58 Identities=19% Similarity=0.198 Sum_probs=41.5
Q ss_pred eeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCCCHHHHH
Q 012982 345 TKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQPLNSQI 424 (452)
Q Consensus 345 irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dqP~~~~~ 424 (452)
++|++.+|+.|-++|....+...+.|+-.+ .++++.++.+.||-+. .+.+.
T Consensus 156 ~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~-------------------------~~v~~~~~~g~gH~i~----~~~~~ 206 (216)
T PF02230_consen 156 TPILIIHGDEDPVVPFEWAEKTAEFLKAAG-------------------------ANVEFHEYPGGGHEIS----PEELR 206 (216)
T ss_dssp S-EEEEEETT-SSSTHHHHHHHHHHHHCTT--------------------------GEEEEEETT-SSS------HHHHH
T ss_pred CcEEEEecCCCCcccHHHHHHHHHHHHhcC-------------------------CCEEEEEcCCCCCCCC----HHHHH
Confidence 699999999999999999888877774222 2457889999999986 46667
Q ss_pred HHHHHHc
Q 012982 425 MIEDWVL 431 (452)
Q Consensus 425 ~i~~fl~ 431 (452)
.+++||.
T Consensus 207 ~~~~~l~ 213 (216)
T PF02230_consen 207 DLREFLE 213 (216)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7777875
No 109
>PLN02454 triacylglycerol lipase
Probab=89.11 E-value=1 Score=45.95 Aligned_cols=69 Identities=16% Similarity=0.240 Sum_probs=50.8
Q ss_pred ChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCC
Q 012982 143 DQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTD 215 (452)
Q Consensus 143 ~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~ 215 (452)
+...+.+++...|+...+++|+.+ ..++++|||.||-.+...|..|.+.... ...+++..+..|.|-+.
T Consensus 204 ~~~S~r~qvl~~V~~l~~~Yp~~~-~sI~vTGHSLGGALAtLaA~di~~~g~~---~~~~~V~~~TFGsPRVG 272 (414)
T PLN02454 204 TKLSARSQLLAKIKELLERYKDEK-LSIVLTGHSLGASLATLAAFDIVENGVS---GADIPVTAIVFGSPQVG 272 (414)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCCC-ceEEEEecCHHHHHHHHHHHHHHHhccc---ccCCceEEEEeCCCccc
Confidence 344678888899999998887653 3599999999999998888888764210 12345667788887764
No 110
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=88.80 E-value=3.7 Score=38.07 Aligned_cols=49 Identities=20% Similarity=0.148 Sum_probs=40.9
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCCCHH
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQPLN 421 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dqP~~ 421 (452)
..|||-.+|..|-|+|...+..+++.+.- . .+-.|.||-|.-..+|-+.
T Consensus 199 ~C~VLTvhGs~D~IVPve~AkefAk~i~n--H---------------------------~L~iIEgADHnyt~~q~~l 247 (269)
T KOG4667|consen 199 QCRVLTVHGSEDEIVPVEDAKEFAKIIPN--H---------------------------KLEIIEGADHNYTGHQSQL 247 (269)
T ss_pred cCceEEEeccCCceeechhHHHHHHhccC--C---------------------------ceEEecCCCcCccchhhhH
Confidence 37999999999999999999999998842 1 3788999999988776554
No 111
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=88.20 E-value=0.81 Score=41.60 Aligned_cols=62 Identities=15% Similarity=0.161 Sum_probs=50.2
Q ss_pred CChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCC
Q 012982 142 RDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGL 213 (452)
Q Consensus 142 ~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~ 213 (452)
++.+++|.|+.+.++.+.++ .+.+++.|+|-|+|.=.+|.+..++...... .++++.+..+-
T Consensus 45 rtP~~~a~Dl~~~i~~y~~~---w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~-------~v~~v~Ll~p~ 106 (192)
T PF06057_consen 45 RTPEQTAADLARIIRHYRAR---WGRKRVVLIGYSFGADVLPFIYNRLPAALRA-------RVAQVVLLSPS 106 (192)
T ss_pred CCHHHHHHHHHHHHHHHHHH---hCCceEEEEeecCCchhHHHHHhhCCHHHHh-------heeEEEEeccC
Confidence 46789999999988888875 5688999999999999999999999776433 56777665544
No 112
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=88.07 E-value=0.83 Score=41.78 Aligned_cols=65 Identities=14% Similarity=0.086 Sum_probs=47.1
Q ss_pred hHHHHHHHHHHHHHHhhh---CCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCCh
Q 012982 144 QISVAKHLFAAITGFINL---DPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDP 216 (452)
Q Consensus 144 ~~~~a~d~~~fL~~f~~~---fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p 216 (452)
..+..+|+.++++-..+. + ++..++++|+|+|-||+.+..++..+.+... ..++++++..|++|.
T Consensus 45 ~p~~~~D~~~a~~~l~~~~~~~-~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~-------~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 45 FPAALEDVKAAYRWLLKNADKL-GIDPERIVLIGDSAGGHLALSLALRARDRGL-------PKPKGIILISPWTDL 112 (211)
T ss_dssp TTHHHHHHHHHHHHHHHTHHHH-TEEEEEEEEEEETHHHHHHHHHHHHHHHTTT-------CHESEEEEESCHSST
T ss_pred ccccccccccceeeeccccccc-cccccceEEeecccccchhhhhhhhhhhhcc-------cchhhhhcccccccc
Confidence 344556666555444432 2 3557799999999999999999988877532 258999999998765
No 113
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=87.53 E-value=3.1 Score=49.29 Aligned_cols=102 Identities=14% Similarity=0.165 Sum_probs=66.6
Q ss_pred CCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCcccccceeeeecCCCcceeeccCCCCCCCChHH
Q 012982 67 TPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQIS 146 (452)
Q Consensus 67 ~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~ 146 (452)
.|-++.++|+.|.+..+..+... + .+...++-+|.| |.|-+ .....+.++
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~-----------------l-------~~~~~v~~~~~~-g~~~~-----~~~~~~l~~ 1117 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRY-----------------L-------DPQWSIYGIQSP-RPDGP-----MQTATSLDE 1117 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHh-----------------c-------CCCCcEEEEECC-CCCCC-----CCCCCCHHH
Confidence 46688899998887766444321 1 123456777866 55533 123457788
Q ss_pred HHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCC
Q 012982 147 VAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNG 212 (452)
Q Consensus 147 ~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng 212 (452)
.|+++.+.++... + ..|+.|+|+|+||..+-.+|.++.++.. .+..+++.++
T Consensus 1118 la~~~~~~i~~~~---~---~~p~~l~G~S~Gg~vA~e~A~~l~~~~~--------~v~~l~l~~~ 1169 (1296)
T PRK10252 1118 VCEAHLATLLEQQ---P---HGPYHLLGYSLGGTLAQGIAARLRARGE--------EVAFLGLLDT 1169 (1296)
T ss_pred HHHHHHHHHHhhC---C---CCCEEEEEechhhHHHHHHHHHHHHcCC--------ceeEEEEecC
Confidence 8888877776532 2 3589999999999999999888866432 4555555554
No 114
>COG0400 Predicted esterase [General function prediction only]
Probab=87.06 E-value=0.71 Score=42.80 Aligned_cols=59 Identities=20% Similarity=0.278 Sum_probs=43.4
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCCCHHHH
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQPLNSQ 423 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dqP~~~~ 423 (452)
.+||++.+|..|-+||..-+++..+.++-.|.+ ....++. .||.++. +.+
T Consensus 146 ~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~-------------------------v~~~~~~-~GH~i~~----e~~ 195 (207)
T COG0400 146 GTPILLSHGTEDPVVPLALAEALAEYLTASGAD-------------------------VEVRWHE-GGHEIPP----EEL 195 (207)
T ss_pred CCeEEEeccCcCCccCHHHHHHHHHHHHHcCCC-------------------------EEEEEec-CCCcCCH----HHH
Confidence 479999999999999999999998887644332 2344444 9999975 455
Q ss_pred HHHHHHHcC
Q 012982 424 IMIEDWVLD 432 (452)
Q Consensus 424 ~~i~~fl~~ 432 (452)
+.+++|+..
T Consensus 196 ~~~~~wl~~ 204 (207)
T COG0400 196 EAARSWLAN 204 (207)
T ss_pred HHHHHHHHh
Confidence 556667643
No 115
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=86.99 E-value=0.63 Score=43.15 Aligned_cols=57 Identities=19% Similarity=0.157 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCCh
Q 012982 147 VAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDP 216 (452)
Q Consensus 147 ~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p 216 (452)
.++.+.+++....+. ....++++|.|-|=||..+-.++.+. . -.+.|++.-+|++-.
T Consensus 86 s~~~l~~li~~~~~~--~i~~~ri~l~GFSQGa~~al~~~l~~----p-------~~~~gvv~lsG~~~~ 142 (216)
T PF02230_consen 86 SAERLDELIDEEVAY--GIDPSRIFLGGFSQGAAMALYLALRY----P-------EPLAGVVALSGYLPP 142 (216)
T ss_dssp HHHHHHHHHHHHHHT--T--GGGEEEEEETHHHHHHHHHHHCT----S-------STSSEEEEES---TT
T ss_pred HHHHHHHHHHHHHHc--CCChhheehhhhhhHHHHHHHHHHHc----C-------cCcCEEEEeeccccc
Confidence 344444555554443 25677899999999996555554322 1 168899988887644
No 116
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=86.68 E-value=2.4 Score=46.98 Aligned_cols=44 Identities=11% Similarity=0.028 Sum_probs=32.1
Q ss_pred ChHHHHHHHHHHHHHHhh----------hCCCCCCCCEEEEeccCCccchhHHHH
Q 012982 143 DQISVAKHLFAAITGFIN----------LDPLFKNRPIYITGESYAGKYVPAIGY 187 (452)
Q Consensus 143 ~~~~~a~d~~~fL~~f~~----------~fp~~~~~~~yl~GESYgG~yvP~lA~ 187 (452)
+..+.+.|+.. |+..+. .+..+...++++.|||.||+.+..++.
T Consensus 521 n~rQ~v~Dll~-L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~ 574 (792)
T TIGR03502 521 NLRQSILDLLG-LRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIA 574 (792)
T ss_pred CHHHHHHHHHH-HHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHH
Confidence 56788888876 444444 123356789999999999988887774
No 117
>PRK04940 hypothetical protein; Provisional
Probab=86.20 E-value=2.9 Score=37.71 Aligned_cols=61 Identities=20% Similarity=0.291 Sum_probs=38.5
Q ss_pred hHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCChhhhhh
Q 012982 144 QISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDPATQVA 221 (452)
Q Consensus 144 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p~~q~~ 221 (452)
..++...+.+.+.++... .. ..++.|+|-|-||.|+..+|.+. .++.| +.||.+.|...+.
T Consensus 39 P~~a~~~l~~~i~~~~~~--~~-~~~~~liGSSLGGyyA~~La~~~-------------g~~aV-LiNPAv~P~~~L~ 99 (180)
T PRK04940 39 PKHDMQHLLKEVDKMLQL--SD-DERPLICGVGLGGYWAERIGFLC-------------GIRQV-IFNPNLFPEENME 99 (180)
T ss_pred HHHHHHHHHHHHHHhhhc--cC-CCCcEEEEeChHHHHHHHHHHHH-------------CCCEE-EECCCCChHHHHH
Confidence 344444444444444321 11 24799999999999988887664 55555 5699999865433
No 118
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=84.50 E-value=5.9 Score=40.80 Aligned_cols=36 Identities=17% Similarity=0.200 Sum_probs=24.2
Q ss_pred CCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCC
Q 012982 167 NRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGL 213 (452)
Q Consensus 167 ~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~ 213 (452)
.....|+|.|+||.-+-++|.+-.+ .+.+++..+|.
T Consensus 287 ~~~~~IaG~S~GGl~AL~~al~~Pd-----------~Fg~v~s~Sgs 322 (411)
T PRK10439 287 ADRTVVAGQSFGGLAALYAGLHWPE-----------RFGCVLSQSGS 322 (411)
T ss_pred ccceEEEEEChHHHHHHHHHHhCcc-----------cccEEEEeccc
Confidence 3468999999999766666654433 45566665554
No 119
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=83.92 E-value=0.29 Score=48.78 Aligned_cols=71 Identities=15% Similarity=0.165 Sum_probs=47.8
Q ss_pred cccceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHH
Q 012982 116 RIFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILK 191 (452)
Q Consensus 116 ~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~ 191 (452)
...|||.||--.++.-.|.. ...+...+++.+.+||+...... .....+++|+|+|-|+|.+-..++++..
T Consensus 103 ~d~NVI~VDWs~~a~~~Y~~----a~~n~~~vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 103 GDYNVIVVDWSRGASNNYPQ----AVANTRLVGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp S-EEEEEEE-HHHHSS-HHH----HHHHHHHHHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred CCceEEEEcchhhccccccc----hhhhHHHHHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 36799999976665544432 12345567778878777776433 4556789999999999999888888866
No 120
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=83.84 E-value=1.8 Score=36.74 Aligned_cols=62 Identities=18% Similarity=0.268 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCC
Q 012982 146 SVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLT 214 (452)
Q Consensus 146 ~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~ 214 (452)
...+.+.+.|++..++.| ..++.|+|||-||-.+..+|..+.++... ...+++-+..|.|-+
T Consensus 45 ~~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~----~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPS----SSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTT----STTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccc----cccceeeeecCCccc
Confidence 345566677777777665 57899999999999999999999876421 124566677776655
No 121
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=83.63 E-value=2.2 Score=43.31 Aligned_cols=60 Identities=20% Similarity=0.212 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHhhhCCCCCC-CCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCChh
Q 012982 147 VAKHLFAAITGFINLDPLFKN-RPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDPA 217 (452)
Q Consensus 147 ~a~d~~~fL~~f~~~fp~~~~-~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p~ 217 (452)
.|.|...+|..-.+.+|...+ .|+.+.|.|||| |...|+.+|. +-.+.||+=..++.-|.
T Consensus 162 qAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~a----------P~~~~~~iDns~~~~p~ 222 (403)
T PF11144_consen 162 QAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKIA----------PWLFDGVIDNSSYALPP 222 (403)
T ss_pred HHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhhC----------ccceeEEEecCccccch
Confidence 488999999998899999875 799999999999 4444544542 12466666556666553
No 122
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=83.20 E-value=3.1 Score=43.13 Aligned_cols=99 Identities=14% Similarity=0.142 Sum_probs=51.6
Q ss_pred CCCCCEEEEecCCC---Chhhh----hhhhhcccCeEEccCCcccccccccccCCCCcccccceeeeecCCCcceeeccC
Q 012982 64 LSQTPLLIWLQGGP---GCSSM----TGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDNPIGAGFSFAAT 136 (452)
Q Consensus 64 ~~~~PlilWlnGGP---G~SS~----~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~ 136 (452)
.+..||++|++||= |.+|. -..|...|=+.+..- ....+...|.....+-=- .++..+
T Consensus 91 a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSv--------NYRLG~lGfL~~~~~~~~-------~~~~~n 155 (491)
T COG2272 91 AEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSV--------NYRLGALGFLDLSSLDTE-------DAFASN 155 (491)
T ss_pred CCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEe--------Ccccccceeeehhhcccc-------cccccc
Confidence 34579999999985 55554 255666664433211 133444444333222111 111000
Q ss_pred CCCCCCCh-HHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHH
Q 012982 137 NDEIPRDQ-ISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAI 185 (452)
Q Consensus 137 ~~~~~~~~-~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~l 185 (452)
... ++++ ..+++++.++.|-. -..++=|+|||-|++-+..+
T Consensus 156 -----~Gl~Dqil--ALkWV~~NIe~FGG-Dp~NVTl~GeSAGa~si~~L 197 (491)
T COG2272 156 -----LGLLDQIL--ALKWVRDNIEAFGG-DPQNVTLFGESAGAASILTL 197 (491)
T ss_pred -----ccHHHHHH--HHHHHHHHHHHhCC-CccceEEeeccchHHHHHHh
Confidence 111 2221 23667777776632 34579999999999665443
No 123
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=83.20 E-value=1.9 Score=37.53 Aligned_cols=44 Identities=20% Similarity=0.286 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHh
Q 012982 146 SVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQ 192 (452)
Q Consensus 146 ~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~ 192 (452)
.+.+++...+++...++| ..+++|+|+|.||..+-.+|..+.++
T Consensus 9 ~~~~~i~~~~~~~~~~~p---~~~i~v~GHSlGg~lA~l~a~~~~~~ 52 (153)
T cd00741 9 SLANLVLPLLKSALAQYP---DYKIHVTGHSLGGALAGLAGLDLRGR 52 (153)
T ss_pred HHHHHHHHHHHHHHHHCC---CCeEEEEEcCHHHHHHHHHHHHHHhc
Confidence 344455555555555444 56899999999999999999888764
No 124
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=83.10 E-value=2.7 Score=39.25 Aligned_cols=59 Identities=12% Similarity=0.211 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCC
Q 012982 148 AKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTD 215 (452)
Q Consensus 148 a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~ 215 (452)
..++...++...+++| +.+++++|+|-||-.+..+|..+.++.. ..+++.+..|.|-+-
T Consensus 111 ~~~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~~------~~~i~~~tFg~P~vg 169 (229)
T cd00519 111 YNQVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRGP------GSDVTVYTFGQPRVG 169 (229)
T ss_pred HHHHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhCC------CCceEEEEeCCCCCC
Confidence 3344455555555544 5689999999999999888888876531 236778888887663
No 125
>PF03283 PAE: Pectinacetylesterase
Probab=82.74 E-value=2.9 Score=42.20 Aligned_cols=139 Identities=16% Similarity=0.127 Sum_probs=67.6
Q ss_pred CceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhh----hhcccCeEEccCCccccccc--ccccCCCCcccccc
Q 012982 46 GSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGN----FLELGPWRVTLSQRQNAEQL--SLKPNPGSWNRIFG 119 (452)
Q Consensus 46 ~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~----f~e~GP~~i~~~~~~~~~~~--~l~~N~~SW~~~an 119 (452)
++--.|++-++.. ..++-++|.|+||=.|-+..-- ..++|-..--+......+.+ ....||.=+ ..|
T Consensus 34 GS~~~yy~~~g~g-----~~s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~--~wN 106 (361)
T PF03283_consen 34 GSPPGYYFRPGSG-----SGSNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFY--NWN 106 (361)
T ss_pred CCCCcEEEccCCC-----CCCceEEEEeccchhcCChhHHhhhccCccccccchhhhccccccccCCcccCCccc--ccc
Confidence 3444455544422 2257899999999888764221 22334332111100000000 234555222 256
Q ss_pred eeeeecCCCcceeeccCCCCCC-CChHHHHHHHHHHHHHHhhhCCCCC-CCCEEEEeccCCccchhHHHHHHHHh
Q 012982 120 LLFIDNPIGAGFSFAATNDEIP-RDQISVAKHLFAAITGFINLDPLFK-NRPIYITGESYAGKYVPAIGYFILKQ 192 (452)
Q Consensus 120 llfiDqPvGtGfSy~~~~~~~~-~~~~~~a~d~~~fL~~f~~~fp~~~-~~~~yl~GESYgG~yvP~lA~~i~~~ 192 (452)
+|||=.=-|.-|+=...+.... .+..-....+++++.+++... .+. ..++.|+|.|-||.=+..-+.++.+.
T Consensus 107 ~V~vpYC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~-gl~~a~~vlltG~SAGG~g~~~~~d~~~~~ 180 (361)
T PF03283_consen 107 HVFVPYCDGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSN-GLPNAKQVLLTGCSAGGLGAILHADYVRDR 180 (361)
T ss_pred EEEEEecCCccccCcccccccCCceeEeecHHHHHHHHHHHHHh-cCcccceEEEeccChHHHHHHHHHHHHHHH
Confidence 7888544444444211100010 011111334444455554332 232 46899999999998877777777664
No 126
>COG0400 Predicted esterase [General function prediction only]
Probab=82.49 E-value=4.6 Score=37.44 Aligned_cols=78 Identities=12% Similarity=-0.001 Sum_probs=47.2
Q ss_pred CCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecc
Q 012982 126 PIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQ 205 (452)
Q Consensus 126 PvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLk 205 (452)
+....|+......-...+....+..+.+||....+.+ ....+++++.|-|=|+.++..+..+..+ .++
T Consensus 58 g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~-gi~~~~ii~~GfSqGA~ial~~~l~~~~-----------~~~ 125 (207)
T COG0400 58 GGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEY-GIDSSRIILIGFSQGANIALSLGLTLPG-----------LFA 125 (207)
T ss_pred CcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHh-CCChhheEEEecChHHHHHHHHHHhCch-----------hhc
Confidence 3344455543221111223334666677777777765 5567899999999999776655544322 567
Q ss_pred eeEecCCCCC
Q 012982 206 GVAIGNGLTD 215 (452)
Q Consensus 206 Gi~igng~~~ 215 (452)
|+++-.|..-
T Consensus 126 ~ail~~g~~~ 135 (207)
T COG0400 126 GAILFSGMLP 135 (207)
T ss_pred cchhcCCcCC
Confidence 7777666643
No 127
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=82.44 E-value=1.6 Score=44.04 Aligned_cols=64 Identities=19% Similarity=0.253 Sum_probs=39.6
Q ss_pred cceeeee-------cCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchh
Q 012982 118 FGLLFID-------NPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVP 183 (452)
Q Consensus 118 anllfiD-------qPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP 183 (452)
|-|||++ +|.|.= ||.+...----+.+|+-.|+.+ |..++++...=+..|+..+|-||||+...
T Consensus 112 AllVFaEHRyYGeS~PFG~~-s~k~~~hlgyLtseQALADfA~-ll~~lK~~~~a~~~pvIafGGSYGGMLaA 182 (492)
T KOG2183|consen 112 ALLVFAEHRYYGESLPFGSQ-SYKDARHLGYLTSEQALADFAE-LLTFLKRDLSAEASPVIAFGGSYGGMLAA 182 (492)
T ss_pred ceEEEeehhccccCCCCcch-hccChhhhccccHHHHHHHHHH-HHHHHhhccccccCcEEEecCchhhHHHH
Confidence 4567766 466665 4432111111255677677766 66667665445688999999999994433
No 128
>PLN02571 triacylglycerol lipase
Probab=81.57 E-value=4.5 Score=41.41 Aligned_cols=70 Identities=10% Similarity=0.059 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCC---CCceeecceeEecCCCCC
Q 012982 145 ISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLP---SSKRVNLQGVAIGNGLTD 215 (452)
Q Consensus 145 ~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~---~~~~inLkGi~igng~~~ 215 (452)
..+.+++...|+.+.+++|.. ..+++++|||.||-.+...|..|....-... ....+.+..+..|.|-+.
T Consensus 204 ~Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVG 276 (413)
T PLN02571 204 TSARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVG 276 (413)
T ss_pred hhHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCcc
Confidence 345677888888888877654 4479999999999999888888865321100 011244666667776654
No 129
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=81.47 E-value=1.9 Score=39.84 Aligned_cols=42 Identities=14% Similarity=0.037 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHH
Q 012982 146 SVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFI 189 (452)
Q Consensus 146 ~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i 189 (452)
-+-.|+.+++..|++.+++ +|||+|+|+|=|+..+-.|-+..
T Consensus 75 ~ay~DV~~AF~~yL~~~n~--GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 75 LAYSDVRAAFDYYLANYNN--GRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhHHHHHHHHHHHHHhcCC--CCCEEEEEeChHHHHHHHHHHHH
Confidence 3456888999999988654 89999999999996655444433
No 130
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=80.87 E-value=12 Score=35.67 Aligned_cols=40 Identities=30% Similarity=0.399 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhc
Q 012982 145 ISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQN 193 (452)
Q Consensus 145 ~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n 193 (452)
++..+.=.+|++++.- +++++||.|+|-|. ++..+|+..+
T Consensus 92 ~~QV~HKlaFik~~~P-----k~~ki~iiGHSiGa----Ym~Lqil~~~ 131 (301)
T KOG3975|consen 92 QDQVDHKLAFIKEYVP-----KDRKIYIIGHSIGA----YMVLQILPSI 131 (301)
T ss_pred hhHHHHHHHHHHHhCC-----CCCEEEEEecchhH----HHHHHHhhhc
Confidence 3333444477777663 38899999999987 5566666653
No 131
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=80.24 E-value=5.8 Score=39.39 Aligned_cols=58 Identities=21% Similarity=0.220 Sum_probs=40.3
Q ss_pred cccceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCC-CCCCCCEEEEeccCCccc
Q 012982 116 RIFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDP-LFKNRPIYITGESYAGKY 181 (452)
Q Consensus 116 ~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp-~~~~~~~yl~GESYgG~y 181 (452)
..+|++... .+|+|+|.. .+ +.++.+.+- +++.++++..+ .-+.+.+.+.|+|-||-.
T Consensus 170 ~~aNvl~fN-YpGVg~S~G-----~~-s~~dLv~~~-~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~V 228 (365)
T PF05677_consen 170 LGANVLVFN-YPGVGSSTG-----PP-SRKDLVKDY-QACVRYLRDEEQGPKAKNIILYGHSLGGGV 228 (365)
T ss_pred cCCcEEEEC-CCccccCCC-----CC-CHHHHHHHH-HHHHHHHHhcccCCChheEEEeeccccHHH
Confidence 457999999 669999943 23 345666655 44666665433 346689999999999944
No 132
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=79.96 E-value=7.9 Score=34.53 Aligned_cols=76 Identities=16% Similarity=0.173 Sum_probs=48.3
Q ss_pred ccceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccC
Q 012982 117 IFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQL 196 (452)
Q Consensus 117 ~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~ 196 (452)
...++-+|.| |-|.+. ....+.+..++...+.++.. . ...++.++|+|+||..+-.+|.++.++.
T Consensus 25 ~~~v~~~~~~-g~~~~~-----~~~~~~~~~~~~~~~~l~~~---~---~~~~~~l~g~s~Gg~~a~~~a~~l~~~~--- 89 (212)
T smart00824 25 RRDVSALPLP-GFGPGE-----PLPASADALVEAQAEAVLRA---A---GGRPFVLVGHSSGGLLAHAVAARLEARG--- 89 (212)
T ss_pred CccEEEecCC-CCCCCC-----CCCCCHHHHHHHHHHHHHHh---c---CCCCeEEEEECHHHHHHHHHHHHHHhCC---
Confidence 3567888844 665442 12345556666555555432 2 2568999999999999988888887643
Q ss_pred CCCceeecceeEecCC
Q 012982 197 PSSKRVNLQGVAIGNG 212 (452)
Q Consensus 197 ~~~~~inLkGi~igng 212 (452)
..++++++.+.
T Consensus 90 -----~~~~~l~~~~~ 100 (212)
T smart00824 90 -----IPPAAVVLLDT 100 (212)
T ss_pred -----CCCcEEEEEcc
Confidence 14566665544
No 133
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=79.25 E-value=3.7 Score=38.49 Aligned_cols=64 Identities=23% Similarity=0.334 Sum_probs=41.2
Q ss_pred cceeeeecCCCcceeeccCCCCCCCChHHHH-HHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHH
Q 012982 118 FGLLFIDNPIGAGFSFAATNDEIPRDQISVA-KHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAI 185 (452)
Q Consensus 118 anllfiDqPvGtGfSy~~~~~~~~~~~~~~a-~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~l 185 (452)
+.||-.| =.|.|-|.....+..+....+-| .|+-.+| .++++ .....|.|.+|+||||+..-.+
T Consensus 58 f~Vlt~d-yRG~g~S~p~~~~~~~~~~~DwA~~D~~aal-~~~~~--~~~~~P~y~vgHS~GGqa~gL~ 122 (281)
T COG4757 58 FEVLTFD-YRGIGQSRPASLSGSQWRYLDWARLDFPAAL-AALKK--ALPGHPLYFVGHSFGGQALGLL 122 (281)
T ss_pred ceEEEEe-cccccCCCccccccCccchhhhhhcchHHHH-HHHHh--hCCCCceEEeeccccceeeccc
Confidence 4688888 88999998765554444444433 3444433 33332 1246799999999999765443
No 134
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=79.01 E-value=4 Score=39.39 Aligned_cols=38 Identities=24% Similarity=0.250 Sum_probs=31.6
Q ss_pred hHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccc
Q 012982 144 QISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKY 181 (452)
Q Consensus 144 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~y 181 (452)
-.+++..+.+.+.......|+=..-++||+|||-|..=
T Consensus 85 a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g 122 (289)
T PF10081_consen 85 AREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYG 122 (289)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccc
Confidence 35678889999999998888877778999999988743
No 135
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=78.76 E-value=2.8 Score=38.89 Aligned_cols=47 Identities=13% Similarity=0.077 Sum_probs=34.4
Q ss_pred HHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCC
Q 012982 155 ITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGL 213 (452)
Q Consensus 155 L~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~ 213 (452)
-.+|++.+|+....++-|.|-|.||-.+-.+|.++. .++.++..+|.
T Consensus 9 Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~------------~i~avVa~~ps 55 (213)
T PF08840_consen 9 AIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP------------QISAVVAISPS 55 (213)
T ss_dssp HHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS------------SEEEEEEES--
T ss_pred HHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC------------CccEEEEeCCc
Confidence 456888899998899999999999988887776663 46677766654
No 136
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=78.03 E-value=14 Score=35.89 Aligned_cols=92 Identities=14% Similarity=0.068 Sum_probs=48.1
Q ss_pred HHHHHHHhc-eeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCcccc
Q 012982 336 FMVEFLVRN-TKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLV 414 (452)
Q Consensus 336 ~~l~~Ll~~-irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmv 414 (452)
+.++.+-++ +||+|..|-.|.++=-.=..+.+... .+.+.|.-....+=....++.--+++...-.-+.+.+-||+.
T Consensus 203 ~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f--~~l~Hf~~~~~~seee~~kI~~~f~~~~~~~sv~f~~dgHf~ 280 (297)
T PF06342_consen 203 EYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKF--KGLDHFNIEKEISEEEKPKILKSFASGQKGASVFFAKDGHFQ 280 (297)
T ss_pred HHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHh--CCccceeeecCCChhHHHHHHHHHhcCCceeEEEEecCChHH
Confidence 345555443 89999999999988555555554432 222222110000000000111111111233457788889999
Q ss_pred CCCCCHHHHHHHHHH
Q 012982 415 PTDQPLNSQIMIEDW 429 (452)
Q Consensus 415 p~dqP~~~~~~i~~f 429 (452)
.=.|++-.-+.+...
T Consensus 281 qK~~A~lIA~~i~~m 295 (297)
T PF06342_consen 281 QKFRADLIAEAIKKM 295 (297)
T ss_pred hHHHHHHHHHHHHHh
Confidence 888888766666554
No 137
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=75.64 E-value=8.6 Score=36.04 Aligned_cols=65 Identities=17% Similarity=0.176 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHhhhC--CCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeE-ecCCCCChh
Q 012982 145 ISVAKHLFAAITGFINLD--PLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVA-IGNGLTDPA 217 (452)
Q Consensus 145 ~~~a~d~~~fL~~f~~~f--p~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~-igng~~~p~ 217 (452)
.+.++.+.+.++...+.. ..-..+++.|+|||.||. +|+..+..... ..-++++|+ ++.|...+.
T Consensus 60 ~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGl----var~~l~~~~~----~~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 60 QRQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGL----VARSALSLPNY----DPDSVKTIITLGTPHRGSP 127 (225)
T ss_pred HHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhH----HHHHHHhcccc----ccccEEEEEEEcCCCCCcc
Confidence 344555555555555443 233578999999999994 44444332211 112566666 777776553
No 138
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=74.94 E-value=16 Score=36.26 Aligned_cols=107 Identities=21% Similarity=0.283 Sum_probs=67.3
Q ss_pred CCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCcccccceeeeecCCCcceeeccCCCCCCCC
Q 012982 64 LSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRD 143 (452)
Q Consensus 64 ~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~ 143 (452)
+.-..|+|.+-|--| |.|+|=.. +|..+..---.||. | |-+-|. .-.++.+
T Consensus 240 ~ngq~LvIC~EGNAG-------FYEvG~m~---------tP~~lgYsvLGwNh---------P-GFagST---G~P~p~n 290 (517)
T KOG1553|consen 240 GNGQDLVICFEGNAG-------FYEVGVMN---------TPAQLGYSVLGWNH---------P-GFAGST---GLPYPVN 290 (517)
T ss_pred CCCceEEEEecCCcc-------ceEeeeec---------ChHHhCceeeccCC---------C-CccccC---CCCCccc
Confidence 455789999988765 56776431 11123333333443 5 544452 2345667
Q ss_pred hHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCC
Q 012982 144 QISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTD 215 (452)
Q Consensus 144 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~ 215 (452)
+..+++.+.+|-.+=+ .|+..++.|.|-|-||.-+...|.-. -++|++++..-+-|
T Consensus 291 ~~nA~DaVvQfAI~~L----gf~~edIilygWSIGGF~~~waAs~Y------------PdVkavvLDAtFDD 346 (517)
T KOG1553|consen 291 TLNAADAVVQFAIQVL----GFRQEDIILYGWSIGGFPVAWAASNY------------PDVKAVVLDATFDD 346 (517)
T ss_pred chHHHHHHHHHHHHHc----CCCccceEEEEeecCCchHHHHhhcC------------CCceEEEeecchhh
Confidence 7777766665554443 57788999999999998888777443 37889887655543
No 139
>KOG3101 consensus Esterase D [General function prediction only]
Probab=74.40 E-value=54 Score=30.53 Aligned_cols=138 Identities=17% Similarity=0.220 Sum_probs=66.9
Q ss_pred CCCceeeeeecCC----CCCceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhh-------h-hhhhcccCeEEccCC
Q 012982 31 ALPTKSGYLPVNP----ATGSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSM-------T-GNFLELGPWRVTLSQ 98 (452)
Q Consensus 31 ~~~~~sGyl~v~~----~~~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~-------~-g~f~e~GP~~i~~~~ 98 (452)
+.++.-|+..|-. +-+..|=|-.|-....+ +.+.-|+++||.|= -|.-. + -.-.+.|=..|.+|.
T Consensus 6 snk~f~G~q~vy~H~S~tl~c~Mtf~vylPp~a~--~~k~~P~lf~LSGL-TCT~~Nfi~Ksg~qq~As~hgl~vV~PDT 82 (283)
T KOG3101|consen 6 SNKCFGGRQKVYKHNSNTLKCSMTFGVYLPPDAP--RGKRCPVLFYLSGL-TCTHENFIEKSGFQQQASKHGLAVVAPDT 82 (283)
T ss_pred ccccccceeeeeeccccccccceEEEEecCCCcc--cCCcCceEEEecCC-cccchhhHhhhhHHHhHhhcCeEEECCCC
Confidence 3445567666632 22445656555333322 24456999999963 44321 1 112346666676663
Q ss_pred cccccccccccCCCCcccccceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhh-hCCCCCCCCEEEEeccC
Q 012982 99 RQNAEQLSLKPNPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFIN-LDPLFKNRPIYITGESY 177 (452)
Q Consensus 99 ~~~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~-~fp~~~~~~~yl~GESY 177 (452)
. +-...+.--+.|| |==.|.||=-..+..... .-.+.=+.+.+-|-+-+. .+-..-..+.-|+|+|+
T Consensus 83 S--PRG~~v~g~~esw---------DFG~GAGFYvnAt~epw~-~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSM 150 (283)
T KOG3101|consen 83 S--PRGVEVAGDDESW---------DFGQGAGFYVNATQEPWA-KHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSM 150 (283)
T ss_pred C--CCccccCCCcccc---------cccCCceeEEecccchHh-hhhhHHHHHHHHHHHHhccccccccchhcceecccc
Confidence 2 1111333344566 435677775322222111 112233333322333332 12223345689999999
Q ss_pred Cccchh
Q 012982 178 AGKYVP 183 (452)
Q Consensus 178 gG~yvP 183 (452)
|||=+-
T Consensus 151 GGhGAl 156 (283)
T KOG3101|consen 151 GGHGAL 156 (283)
T ss_pred CCCceE
Confidence 997644
No 140
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=73.97 E-value=11 Score=39.09 Aligned_cols=115 Identities=17% Similarity=0.277 Sum_probs=74.8
Q ss_pred CceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhhhhc---ccCeEEccCCcccccccccccCCCCcccccceee
Q 012982 46 GSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLE---LGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLF 122 (452)
Q Consensus 46 ~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~f~e---~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllf 122 (452)
...++|.|.+.+- .-||.+.|.|=-.+-...|.++- ..|+ |||
T Consensus 275 reEi~yYFnPGD~-------KPPL~VYFSGyR~aEGFEgy~MMk~Lg~Pf---------------------------LL~ 320 (511)
T TIGR03712 275 RQEFIYYFNPGDF-------KPPLNVYFSGYRPAEGFEGYFMMKRLGAPF---------------------------LLI 320 (511)
T ss_pred CCeeEEecCCcCC-------CCCeEEeeccCcccCcchhHHHHHhcCCCe---------------------------EEe
Confidence 3456666655543 46999999996666555555443 2455 666
Q ss_pred eecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCcee
Q 012982 123 IDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRV 202 (452)
Q Consensus 123 iDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~i 202 (452)
=| |+=-|=++.... ++.-+.+.+.+++-++.- .|..+++.|.|-|+|..=+-+.+. ++
T Consensus 321 ~D-pRleGGaFYlGs-------~eyE~~I~~~I~~~L~~L-gF~~~qLILSGlSMGTfgAlYYga-------------~l 378 (511)
T TIGR03712 321 GD-PRLEGGAFYLGS-------DEYEQGIINVIQEKLDYL-GFDHDQLILSGLSMGTFGALYYGA-------------KL 378 (511)
T ss_pred ec-cccccceeeeCc-------HHHHHHHHHHHHHHHHHh-CCCHHHeeeccccccchhhhhhcc-------------cC
Confidence 67 766666654322 222334455566666543 688999999999999855444443 35
Q ss_pred ecceeEecCCCCCh
Q 012982 203 NLQGVAIGNGLTDP 216 (452)
Q Consensus 203 nLkGi~igng~~~p 216 (452)
+-.+|+||-|+++-
T Consensus 379 ~P~AIiVgKPL~NL 392 (511)
T TIGR03712 379 SPHAIIVGKPLVNL 392 (511)
T ss_pred CCceEEEcCcccch
Confidence 77799999998774
No 141
>COG0627 Predicted esterase [General function prediction only]
Probab=73.77 E-value=6.5 Score=38.94 Aligned_cols=117 Identities=15% Similarity=0.116 Sum_probs=59.3
Q ss_pred CCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccC-CCCcccccceeeeecCCCcceeeccCCCCCCCCh
Q 012982 66 QTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPN-PGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQ 144 (452)
Q Consensus 66 ~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N-~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~~ 144 (452)
++--++|+.+|..|.. -.+...++.+-..+.. ...+.-+ -.-+....++--|+ |+|.|.|+..+....+...
T Consensus 52 ~~ipV~~~l~G~t~~~--~~~~~~~g~~~~a~~~----g~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~~~~ 124 (316)
T COG0627 52 RDIPVLYLLSGLTCNE--PNVYLLDGLRRQADES----GWAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPPWAS 124 (316)
T ss_pred CCCCEEEEeCCCCCCC--CceEeccchhhhhhhc----CeEEecCCCCcccCCCCccccc-cCCCccceecccccCcccc
Confidence 3334455556788875 2333444444322211 0011111 22244555566667 8999999876532221111
Q ss_pred HHHHHHHHHHH-----HHHhhhCCCCCC-CCEEEEeccCCccchhHHHHHHHH
Q 012982 145 ISVAKHLFAAI-----TGFINLDPLFKN-RPIYITGESYAGKYVPAIGYFILK 191 (452)
Q Consensus 145 ~~~a~d~~~fL-----~~f~~~fp~~~~-~~~yl~GESYgG~yvP~lA~~i~~ 191 (452)
. .-+++.|| ..+.+.||--.+ ..-.|+|.|.||+=+-.+|.+-.+
T Consensus 125 ~--~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd 175 (316)
T COG0627 125 G--PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPD 175 (316)
T ss_pred C--ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcc
Confidence 0 12222222 234445543221 368999999999887777766543
No 142
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=73.72 E-value=4.6 Score=38.40 Aligned_cols=58 Identities=21% Similarity=0.147 Sum_probs=44.4
Q ss_pred eeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCCCHHHHH
Q 012982 345 TKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQPLNSQI 424 (452)
Q Consensus 345 irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dqP~~~~~ 424 (452)
.||||++|..|-++|+....+..+..+=+ ....+|+||||--..--| .-.+
T Consensus 193 ~PVLiiHgtdDevv~~sHg~~Lye~~k~~----------------------------~epl~v~g~gH~~~~~~~-~yi~ 243 (258)
T KOG1552|consen 193 CPVLIIHGTDDEVVDFSHGKALYERCKEK----------------------------VEPLWVKGAGHNDIELYP-EYIE 243 (258)
T ss_pred CCEEEEecccCceecccccHHHHHhcccc----------------------------CCCcEEecCCCcccccCH-HHHH
Confidence 69999999999999999888777665311 236889999999776555 5566
Q ss_pred HHHHHHc
Q 012982 425 MIEDWVL 431 (452)
Q Consensus 425 ~i~~fl~ 431 (452)
.+++|+.
T Consensus 244 ~l~~f~~ 250 (258)
T KOG1552|consen 244 HLRRFIS 250 (258)
T ss_pred HHHHHHH
Confidence 6777774
No 143
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=73.09 E-value=5.5 Score=41.37 Aligned_cols=41 Identities=12% Similarity=0.072 Sum_probs=30.5
Q ss_pred hHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHH
Q 012982 144 QISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGY 187 (452)
Q Consensus 144 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~ 187 (452)
.++..+++.+.+++.++.. ..+++.|+|+|.||..+-.++.
T Consensus 141 ~~~~~~~Lk~lIe~~~~~~---g~~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 141 LPETMDGLKKKLETVYKAS---GGKKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred HHHHHHHHHHHHHHHHHHc---CCCCEEEEEECHhHHHHHHHHH
Confidence 3455677888888887753 4679999999999966665554
No 144
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=72.58 E-value=7.1 Score=36.84 Aligned_cols=67 Identities=9% Similarity=0.032 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCChh
Q 012982 146 SVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDPA 217 (452)
Q Consensus 146 ~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p~ 217 (452)
..+..+.+||+...+. -...+++|.+||.|+..+-..-..+...... ....-+|..|++.+|-++..
T Consensus 74 ~s~~~l~~~L~~L~~~---~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~--~~~~~~~~~viL~ApDid~d 140 (233)
T PF05990_consen 74 FSGPALARFLRDLARA---PGIKRIHILAHSMGNRVLLEALRQLASEGER--PDVKARFDNVILAAPDIDND 140 (233)
T ss_pred HHHHHHHHHHHHHHhc---cCCceEEEEEeCchHHHHHHHHHHHHhcccc--hhhHhhhheEEEECCCCCHH
Confidence 4455565655555443 2467999999999998887777777665321 01123788899999888764
No 145
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=72.36 E-value=18 Score=27.83 Aligned_cols=78 Identities=14% Similarity=0.152 Sum_probs=49.9
Q ss_pred ceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhhhhhhcccCeEEccCCcccccccccccCCCCcccccceeeeecC
Q 012982 47 SAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDNP 126 (452)
Q Consensus 47 ~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDqP 126 (452)
..||+..+...+ + .+.+++.++|--..|..+..|. . .+..+ -..|+-+| -
T Consensus 2 ~~L~~~~w~p~~-----~-~k~~v~i~HG~~eh~~ry~~~a---~--------------~L~~~------G~~V~~~D-~ 51 (79)
T PF12146_consen 2 TKLFYRRWKPEN-----P-PKAVVVIVHGFGEHSGRYAHLA---E--------------FLAEQ------GYAVFAYD-H 51 (79)
T ss_pred cEEEEEEecCCC-----C-CCEEEEEeCCcHHHHHHHHHHH---H--------------HHHhC------CCEEEEEC-C
Confidence 467777776543 2 5789999998744444443332 1 12222 24578899 7
Q ss_pred CCcceeeccCCCCCCCChHHHHHHHHHHHH
Q 012982 127 IGAGFSFAATNDEIPRDQISVAKHLFAAIT 156 (452)
Q Consensus 127 vGtGfSy~~~~~~~~~~~~~~a~d~~~fL~ 156 (452)
+|-|.|-. ......+.++..+|+..|++
T Consensus 52 rGhG~S~g--~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 52 RGHGRSEG--KRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CcCCCCCC--cccccCCHHHHHHHHHHHhC
Confidence 79999953 23456678888888887763
No 146
>PLN02719 triacylglycerol lipase
Probab=72.26 E-value=10 Score=39.71 Aligned_cols=71 Identities=13% Similarity=0.160 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHhhhCCCC--CCCCEEEEeccCCccchhHHHHHHHHhcccC-CCCceeecceeEecCCCCC
Q 012982 145 ISVAKHLFAAITGFINLDPLF--KNRPIYITGESYAGKYVPAIGYFILKQNKQL-PSSKRVNLQGVAIGNGLTD 215 (452)
Q Consensus 145 ~~~a~d~~~fL~~f~~~fp~~--~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~-~~~~~inLkGi~igng~~~ 215 (452)
..+.+++...|+...+++|.. ....+.|+|+|-||-.+...|..|.+..-.. .....+.+.-+..|.|-+.
T Consensus 273 ~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVG 346 (518)
T PLN02719 273 FSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVG 346 (518)
T ss_pred hhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCcc
Confidence 456778888899988888764 3457999999999999999898887642110 0011234445556666553
No 147
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=71.99 E-value=31 Score=33.05 Aligned_cols=89 Identities=21% Similarity=0.225 Sum_probs=57.7
Q ss_pred CEEEEecCCCChhhhh-hhhhcccCeEEccCCcccccccccccCCCCcccccceeeeecCCCcceeeccCCCCCCCChHH
Q 012982 68 PLLIWLQGGPGCSSMT-GNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQIS 146 (452)
Q Consensus 68 PlilWlnGGPG~SS~~-g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~ 146 (452)
|.+|+++++=|.-..+ .+..+++|-. -++-++.| |-|.- .....+.++
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~~-------------------------~v~~l~a~-g~~~~-----~~~~~~l~~ 49 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPLL-------------------------PVYGLQAP-GYGAG-----EQPFASLDD 49 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccCc-------------------------eeeccccC-ccccc-----ccccCCHHH
Confidence 5789999887775443 3444555531 13335544 33321 112346777
Q ss_pred HHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhc
Q 012982 147 VAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQN 193 (452)
Q Consensus 147 ~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n 193 (452)
.|+...+.|+ +..|+ -|.+|.|.|+||..+=.+|.++..+-
T Consensus 50 ~a~~yv~~Ir---~~QP~---GPy~L~G~S~GG~vA~evA~qL~~~G 90 (257)
T COG3319 50 MAAAYVAAIR---RVQPE---GPYVLLGWSLGGAVAFEVAAQLEAQG 90 (257)
T ss_pred HHHHHHHHHH---HhCCC---CCEEEEeeccccHHHHHHHHHHHhCC
Confidence 7777766665 44564 39999999999999999999998764
No 148
>PRK14567 triosephosphate isomerase; Provisional
Probab=71.87 E-value=9.4 Score=36.49 Aligned_cols=61 Identities=18% Similarity=0.164 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCChh
Q 012982 145 ISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDPA 217 (452)
Q Consensus 145 ~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p~ 217 (452)
.+.++++..++++++..+-+-....+=|. |||---|.=+..|.+.. ++.|++||.+..++.
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~~---------diDG~LVGgasL~~~ 238 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSLP---------DVDGGLIGGASLKAA 238 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcCC---------CCCEEEeehhhhcHH
Confidence 45678888999999865311112233333 99999999999998853 699999999998874
No 149
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=71.78 E-value=43 Score=33.28 Aligned_cols=120 Identities=15% Similarity=0.182 Sum_probs=67.8
Q ss_pred CceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhh--h----hhhhhcccCeEEccCCcccccccccccCCCCcccccc
Q 012982 46 GSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSS--M----TGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFG 119 (452)
Q Consensus 46 ~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS--~----~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~an 119 (452)
+.-.+.|.-..+ ....|+++-++|==|.|. . ...+.+-| ..
T Consensus 60 ~~~~ldw~~~p~------~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg---------------------------~~ 106 (345)
T COG0429 60 GFIDLDWSEDPR------AAKKPLVVLFHGLEGSSNSPYARGLMRALSRRG---------------------------WL 106 (345)
T ss_pred CEEEEeeccCcc------ccCCceEEEEeccCCCCcCHHHHHHHHHHHhcC---------------------------Ce
Confidence 445666654321 235699999999666543 1 12222222 23
Q ss_pred eeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCC
Q 012982 120 LLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSS 199 (452)
Q Consensus 120 llfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~ 199 (452)
++-.+ -+|.|.+-...+.-+... ..+|+..++..-.+.+| .+|+|.+|-|.|| -++|.++.++....
T Consensus 107 ~Vv~~-~Rgcs~~~n~~p~~yh~G---~t~D~~~~l~~l~~~~~---~r~~~avG~SLGg---nmLa~ylgeeg~d~--- 173 (345)
T COG0429 107 VVVFH-FRGCSGEANTSPRLYHSG---ETEDIRFFLDWLKARFP---PRPLYAVGFSLGG---NMLANYLGEEGDDL--- 173 (345)
T ss_pred EEEEe-cccccCCcccCcceeccc---chhHHHHHHHHHHHhCC---CCceEEEEecccH---HHHHHHHHhhccCc---
Confidence 45556 788888743232211111 12566555544444454 7899999999999 56788887764331
Q ss_pred ceeecceeEecCCC
Q 012982 200 KRVNLQGVAIGNGL 213 (452)
Q Consensus 200 ~~inLkGi~igng~ 213 (452)
....++++-+|+
T Consensus 174 --~~~aa~~vs~P~ 185 (345)
T COG0429 174 --PLDAAVAVSAPF 185 (345)
T ss_pred --ccceeeeeeCHH
Confidence 124555555554
No 150
>PRK14566 triosephosphate isomerase; Provisional
Probab=71.21 E-value=9.2 Score=36.69 Aligned_cols=60 Identities=22% Similarity=0.269 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCChh
Q 012982 146 SVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDPA 217 (452)
Q Consensus 146 ~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p~ 217 (452)
+.|+++..||++++...-+.....+=|. |||---|.-+..|.+.. ++.|++||..-.++.
T Consensus 189 e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~---------dIDG~LVGgASL~~~ 248 (260)
T PRK14566 189 EQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQP---------DVDGGLIGGASLNST 248 (260)
T ss_pred HHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcCC---------CCCeEEechHhcCHH
Confidence 4578889999999864311111223343 99999999999998754 799999999988874
No 151
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=69.66 E-value=18 Score=38.54 Aligned_cols=33 Identities=12% Similarity=-0.009 Sum_probs=24.0
Q ss_pred HHHHHHhhhCCCCCCCCEEEEeccCCccchhHHH
Q 012982 153 AAITGFINLDPLFKNRPIYITGESYAGKYVPAIG 186 (452)
Q Consensus 153 ~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA 186 (452)
+++++.+..|- =-.+++-|+|+|.||..+-.+.
T Consensus 181 ~wv~~~I~~FG-Gdp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 181 RWVKDNIPSFG-GDPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred HHHHHHHHhcC-CCCCeEEEEeechhHHHHHHHh
Confidence 66777776663 3456899999999997775543
No 152
>PLN02753 triacylglycerol lipase
Probab=69.44 E-value=7.7 Score=40.79 Aligned_cols=73 Identities=14% Similarity=0.169 Sum_probs=48.9
Q ss_pred ChHHHHHHHHHHHHHHhhhCCC--CCCCCEEEEeccCCccchhHHHHHHHHhccc-CCCCceeecceeEecCCCCC
Q 012982 143 DQISVAKHLFAAITGFINLDPL--FKNRPIYITGESYAGKYVPAIGYFILKQNKQ-LPSSKRVNLQGVAIGNGLTD 215 (452)
Q Consensus 143 ~~~~~a~d~~~fL~~f~~~fp~--~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~-~~~~~~inLkGi~igng~~~ 215 (452)
+...+.+++...|+...+++|. .....++|+|+|-||-.+...|..|.+..-. ......+++.-+..|.|-+.
T Consensus 285 ~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVG 360 (531)
T PLN02753 285 AKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVG 360 (531)
T ss_pred chhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCcc
Confidence 4456778888889998887763 2356899999999999999888888663211 00111234555556666553
No 153
>COG5510 Predicted small secreted protein [Function unknown]
Probab=68.75 E-value=2.2 Score=28.57 Aligned_cols=22 Identities=23% Similarity=0.085 Sum_probs=18.3
Q ss_pred CCccchHHHHHHHHHhhcCCCC
Q 012982 1 MKSTTTIYFLFCFFFFLHHSPS 22 (452)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~ 22 (452)
||++.-+++++++.+++..+|-
T Consensus 2 mk~t~l~i~~vll~s~llaaCN 23 (44)
T COG5510 2 MKKTILLIALVLLASTLLAACN 23 (44)
T ss_pred chHHHHHHHHHHHHHHHHHHhh
Confidence 8898999998888887777774
No 154
>PLN02324 triacylglycerol lipase
Probab=67.17 E-value=9.8 Score=38.95 Aligned_cols=49 Identities=14% Similarity=0.083 Sum_probs=38.3
Q ss_pred ChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHh
Q 012982 143 DQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQ 192 (452)
Q Consensus 143 ~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~ 192 (452)
+...+.+++...|+...+++|.. ...+.++|||-||-.+...|..|.+.
T Consensus 191 ~k~SareqVl~eV~~L~~~Yp~e-~~sItvTGHSLGGALAtLaA~dl~~~ 239 (415)
T PLN02324 191 DTTSAQEQVQGELKRLLELYKNE-EISITFTGHSLGAVMSVLSAADLVYG 239 (415)
T ss_pred chhHHHHHHHHHHHHHHHHCCCC-CceEEEecCcHHHHHHHHHHHHHHHh
Confidence 33456777888888888877643 34799999999999998888888764
No 155
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=66.96 E-value=10 Score=35.59 Aligned_cols=37 Identities=22% Similarity=0.221 Sum_probs=27.6
Q ss_pred HHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHh
Q 012982 152 FAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQ 192 (452)
Q Consensus 152 ~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~ 192 (452)
.++++...+.+++ +++|+|||=||..+-+.|..+.+.
T Consensus 72 ~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~~ 108 (224)
T PF11187_consen 72 LAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDDE 108 (224)
T ss_pred HHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccHH
Confidence 3556666665543 599999999999988888776543
No 156
>PLN02408 phospholipase A1
Probab=64.44 E-value=10 Score=38.29 Aligned_cols=46 Identities=17% Similarity=0.116 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHh
Q 012982 146 SVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQ 192 (452)
Q Consensus 146 ~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~ 192 (452)
.+.+++.+.|+..++++|+. ...++++|||-||-.+...|..|.+.
T Consensus 179 s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~~ 224 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKTT 224 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHHh
Confidence 45677778888888887754 34699999999999998888888764
No 157
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=63.66 E-value=13 Score=34.60 Aligned_cols=49 Identities=18% Similarity=0.055 Sum_probs=35.5
Q ss_pred ChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHh
Q 012982 143 DQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQ 192 (452)
Q Consensus 143 ~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~ 192 (452)
+.+..++.+.+.|.+..+..+. +.+++.++|+|.||.++=+....+.+.
T Consensus 54 gI~~~g~rL~~eI~~~~~~~~~-~~~~IsfIgHSLGGli~r~al~~~~~~ 102 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDYES-KIRKISFIGHSLGGLIARYALGLLHDK 102 (217)
T ss_pred hhHHHHHHHHHHHHHhcccccc-ccccceEEEecccHHHHHHHHHHhhhc
Confidence 3455678888888888876532 257999999999998886655555554
No 158
>PRK10299 PhoPQ regulatory protein; Provisional
Probab=62.71 E-value=5.8 Score=26.97 Aligned_cols=9 Identities=22% Similarity=0.213 Sum_probs=8.3
Q ss_pred CCccchHHH
Q 012982 1 MKSTTTIYF 9 (452)
Q Consensus 1 ~~~~~~~~~ 9 (452)
|||.|||++
T Consensus 1 ~kk~rwiil 9 (47)
T PRK10299 1 MKKFRWVVL 9 (47)
T ss_pred CceeeehHH
Confidence 999999987
No 159
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=62.57 E-value=25 Score=34.55 Aligned_cols=69 Identities=13% Similarity=0.126 Sum_probs=38.0
Q ss_pred ChHHHHHHHHHHHHHHhhhC-CC-CCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCChhh
Q 012982 143 DQISVAKHLFAAITGFINLD-PL-FKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDPAT 218 (452)
Q Consensus 143 ~~~~~a~d~~~fL~~f~~~f-p~-~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p~~ 218 (452)
+.++.++|+.++ .++++.. .. +...++.|.|+|=|..=+-.+.. ..+.. ...-.++|+|+-.|+.|...
T Consensus 82 SL~~D~~eI~~~-v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~---~~~~~---~~~~~VdG~ILQApVSDREa 152 (303)
T PF08538_consen 82 SLDRDVEEIAQL-VEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLS---SPNPS---PSRPPVDGAILQAPVSDREA 152 (303)
T ss_dssp -HHHHHHHHHHH-HHHHHHHS------S-EEEEEECCHHHHHHHHHH---H-TT------CCCEEEEEEEEE---TTS
T ss_pred hhhhHHHHHHHH-HHHHHHhhccccCCccEEEEecCCCcHHHHHHHh---ccCcc---ccccceEEEEEeCCCCChhH
Confidence 567778888764 4455432 11 45679999999999965544333 32210 11347999999999888653
No 160
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=62.56 E-value=29 Score=32.60 Aligned_cols=66 Identities=20% Similarity=0.119 Sum_probs=48.2
Q ss_pred CCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCC
Q 012982 140 IPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLT 214 (452)
Q Consensus 140 ~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~ 214 (452)
+..+..+.++.+.++|+.+.. ..+++.|+|.|-|+.-+-...+++.+.... ..=+++.+++||+.-
T Consensus 25 ~~~Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~----~~~~l~fVl~gnP~r 90 (225)
T PF08237_consen 25 YDESVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDP----PPDDLSFVLIGNPRR 90 (225)
T ss_pred cchHHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCC----CcCceEEEEecCCCC
Confidence 334556667788888887776 478999999999998888877777764321 113678899999863
No 161
>PRK07868 acyl-CoA synthetase; Validated
Probab=61.90 E-value=10 Score=43.84 Aligned_cols=64 Identities=19% Similarity=0.143 Sum_probs=49.2
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEE-EEEcCCccccCC---CCC
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSH-VVVLGAGHLVPT---DQP 419 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf-~~V~~AGHmvp~---dqP 419 (452)
+.+||++.|..|.++|...++.+.+.+. +..+ ..+.++|||.++ .-|
T Consensus 297 ~~P~L~i~G~~D~ivp~~~~~~l~~~i~-----------------------------~a~~~~~~~~~GH~g~~~g~~a~ 347 (994)
T PRK07868 297 TCPVLAFVGEVDDIGQPASVRGIRRAAP-----------------------------NAEVYESLIRAGHFGLVVGSRAA 347 (994)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC-----------------------------CCeEEEEeCCCCCEeeeechhhh
Confidence 3799999999999999999998877652 1123 567899999654 467
Q ss_pred HHHHHHHHHHHcCCCcc
Q 012982 420 LNSQIMIEDWVLDKGLF 436 (452)
Q Consensus 420 ~~~~~~i~~fl~~~~~~ 436 (452)
+.....|.+||..+.--
T Consensus 348 ~~~wp~i~~wl~~~~~~ 364 (994)
T PRK07868 348 QQTWPTVADWVKWLEGD 364 (994)
T ss_pred hhhChHHHHHHHHhccC
Confidence 77778899999855543
No 162
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=60.64 E-value=16 Score=36.22 Aligned_cols=139 Identities=18% Similarity=0.183 Sum_probs=67.2
Q ss_pred CceEEEEEEEecCCCCCCCCCCCEEEEecCCCChhhhh---hhhhcccCeEEccCCcccccccccccCCCCcccccceee
Q 012982 46 GSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMT---GNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLF 122 (452)
Q Consensus 46 ~~~lfy~~~es~~~~~~~~~~~PlilWlnGGPG~SS~~---g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllf 122 (452)
+..++=|++.-++. ....|.||.++|..|.+... ..+...|=..+..+-...+ .........
T Consensus 66 g~~V~g~l~~P~~~----~~~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~rGqg---~~~~d~~~~-------- 130 (320)
T PF05448_consen 66 GSRVYGWLYRPKNA----KGKLPAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDVRGQG---GRSPDYRGS-------- 130 (320)
T ss_dssp GEEEEEEEEEES-S----SSSEEEEEEE--TT--GGGHHHHHHHHHTT-EEEEE--TTTS---SSS-B-SSB--------
T ss_pred CCEEEEEEEecCCC----CCCcCEEEEecCCCCCCCCcccccccccCCeEEEEecCCCCC---CCCCCcccc--------
Confidence 67788888876532 34789999999987775433 2344444444332210000 000000000
Q ss_pred eecCCCcceeeccCCCCCCCC--hHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCc
Q 012982 123 IDNPIGAGFSFAATNDEIPRD--QISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSK 200 (452)
Q Consensus 123 iDqPvGtGfSy~~~~~~~~~~--~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~ 200 (452)
..+..-|+......+ .+.+ ...+..|.+++ ..|+...|+.-.+++.++|+|-||...-.+|. +-+
T Consensus 131 -~~~~~~g~~~~g~~~-~~e~~yyr~~~~D~~ra-vd~l~slpevD~~rI~v~G~SqGG~lal~~aa-Ld~--------- 197 (320)
T PF05448_consen 131 -SGGTLKGHITRGIDD-NPEDYYYRRVYLDAVRA-VDFLRSLPEVDGKRIGVTGGSQGGGLALAAAA-LDP--------- 197 (320)
T ss_dssp -SSS-SSSSTTTTTTS--TTT-HHHHHHHHHHHH-HHHHHTSTTEEEEEEEEEEETHHHHHHHHHHH-HSS---------
T ss_pred -CCCCCccHHhcCccC-chHHHHHHHHHHHHHHH-HHHHHhCCCcCcceEEEEeecCchHHHHHHHH-hCc---------
Confidence 001122222110000 0111 12345666664 45666788888899999999999977655553 311
Q ss_pred eeecceeEecCCCC
Q 012982 201 RVNLQGVAIGNGLT 214 (452)
Q Consensus 201 ~inLkGi~igng~~ 214 (452)
.+++++...|+.
T Consensus 198 --rv~~~~~~vP~l 209 (320)
T PF05448_consen 198 --RVKAAAADVPFL 209 (320)
T ss_dssp --T-SEEEEESESS
T ss_pred --cccEEEecCCCc
Confidence 477777766654
No 163
>PLN02310 triacylglycerol lipase
Probab=60.45 E-value=20 Score=36.70 Aligned_cols=64 Identities=13% Similarity=0.156 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHhhhCCC-CCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCC
Q 012982 146 SVAKHLFAAITGFINLDPL-FKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTD 215 (452)
Q Consensus 146 ~~a~d~~~fL~~f~~~fp~-~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~ 215 (452)
.+.+++.+.++...+.+++ -....+.|+|||-||-.+...|..|.+... .+++.-+..|.|-+.
T Consensus 186 sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~~------~~~v~vyTFGsPRVG 250 (405)
T PLN02310 186 SASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTIP------DLFVSVISFGAPRVG 250 (405)
T ss_pred hHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhCc------CcceeEEEecCCCcc
Confidence 3455666667776665542 224579999999999998888877754321 234444555665553
No 164
>PLN02429 triosephosphate isomerase
Probab=60.27 E-value=19 Score=35.50 Aligned_cols=69 Identities=17% Similarity=0.228 Sum_probs=48.5
Q ss_pred CCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhh-CCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecc
Q 012982 127 IGAGFSFAATNDEIPRDQISVAKHLFAAITGFINL-DPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQ 205 (452)
Q Consensus 127 vGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~-fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLk 205 (452)
+|||-+- ..+.++.+.+++++|+.. +.+-....+-|. |||---|.-+..+..+. ++.
T Consensus 230 IGTGk~a----------s~e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~~---------diD 287 (315)
T PLN02429 230 IGTGKVA----------SPQQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKEE---------DID 287 (315)
T ss_pred hCCCCCC----------CHHHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcCC---------CCC
Confidence 6777762 224577888899998864 222122334444 99999999998887643 799
Q ss_pred eeEecCCCCChh
Q 012982 206 GVAIGNGLTDPA 217 (452)
Q Consensus 206 Gi~igng~~~p~ 217 (452)
|++||.+.+++.
T Consensus 288 G~LVGgASL~~~ 299 (315)
T PLN02429 288 GFLVGGASLKGP 299 (315)
T ss_pred EEEeecceecHH
Confidence 999999998764
No 165
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=59.64 E-value=21 Score=33.74 Aligned_cols=61 Identities=20% Similarity=0.217 Sum_probs=46.3
Q ss_pred eeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCCCH---H
Q 012982 345 TKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQPL---N 421 (452)
Q Consensus 345 irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dqP~---~ 421 (452)
.++|+.+|..|.++|...++.......-. +...+.+.+++|....+.+. .
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~H~~~~~~~~~~~~ 285 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARER---------------------------PKKLLFVPGGGHIDLYDNPPAVEQ 285 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccC---------------------------CceEEEecCCccccccCccHHHHH
Confidence 69999999999999988887777664310 23578899999999986655 5
Q ss_pred HHHHHHHHHcC
Q 012982 422 SQIMIEDWVLD 432 (452)
Q Consensus 422 ~~~~i~~fl~~ 432 (452)
++.-+.+|+..
T Consensus 286 ~~~~~~~f~~~ 296 (299)
T COG1073 286 ALDKLAEFLER 296 (299)
T ss_pred HHHHHHHHHHH
Confidence 66667777653
No 166
>PLN02761 lipase class 3 family protein
Probab=58.31 E-value=16 Score=38.39 Aligned_cols=72 Identities=13% Similarity=0.156 Sum_probs=46.2
Q ss_pred hHHHHHHHHHHHHHHhhhCCCC---CCCCEEEEeccCCccchhHHHHHHHHhcccC--CCCceeecceeEecCCCCC
Q 012982 144 QISVAKHLFAAITGFINLDPLF---KNRPIYITGESYAGKYVPAIGYFILKQNKQL--PSSKRVNLQGVAIGNGLTD 215 (452)
Q Consensus 144 ~~~~a~d~~~fL~~f~~~fp~~---~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~--~~~~~inLkGi~igng~~~ 215 (452)
...+.+++...|+...+.+|+. ....++++|||-||-.+-..|..|.+.+-.. .....+++.-+..|.|-+.
T Consensus 267 k~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVG 343 (527)
T PLN02761 267 SFSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVG 343 (527)
T ss_pred chhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcC
Confidence 3456778888888888877532 2346999999999999888888886532110 0012234555555665543
No 167
>PLN00413 triacylglycerol lipase
Probab=57.52 E-value=11 Score=39.14 Aligned_cols=39 Identities=10% Similarity=0.310 Sum_probs=30.6
Q ss_pred HHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHH
Q 012982 150 HLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILK 191 (452)
Q Consensus 150 d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~ 191 (452)
++.+.|++.++.+| +.+++++|||.||..+...|..+..
T Consensus 269 ~i~~~Lk~ll~~~p---~~kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 269 TILRHLKEIFDQNP---TSKFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHHHHHHCC---CCeEEEEecCHHHHHHHHHHHHHHh
Confidence 45567778887766 4479999999999998888876654
No 168
>PLN02561 triosephosphate isomerase
Probab=56.98 E-value=21 Score=34.21 Aligned_cols=59 Identities=15% Similarity=0.198 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHhhh-CCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCCh
Q 012982 146 SVAKHLFAAITGFINL-DPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDP 216 (452)
Q Consensus 146 ~~a~d~~~fL~~f~~~-fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p 216 (452)
+.++++.+++++++.+ +..-....+-|. |||---|.-+..+.... ++.|++||.+-.++
T Consensus 180 ~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~~---------~iDG~LVG~ASL~~ 239 (253)
T PLN02561 180 AQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQP---------DVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcCC---------CCCeEEEehHhhHH
Confidence 3567788888888853 322222344444 99999999999987643 79999999999886
No 169
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=56.73 E-value=16 Score=32.66 Aligned_cols=43 Identities=9% Similarity=0.118 Sum_probs=34.4
Q ss_pred eeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCC
Q 012982 345 TKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTD 417 (452)
Q Consensus 345 irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~d 417 (452)
++.+++.++.|..||+.-++.+.++++- .++.+.++||+...+
T Consensus 115 ~~~~viaS~nDp~vp~~~a~~~A~~l~a------------------------------~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 115 FPSIVIASDNDPYVPFERAQRLAQRLGA------------------------------ELIILGGGGHFNAAS 157 (171)
T ss_dssp CCEEEEEETTBSSS-HHHHHHHHHHHT-------------------------------EEEEETS-TTSSGGG
T ss_pred CCeEEEEcCCCCccCHHHHHHHHHHcCC------------------------------CeEECCCCCCccccc
Confidence 4558999999999999999999998841 489999999997654
No 170
>PLN02847 triacylglycerol lipase
Probab=56.70 E-value=19 Score=38.50 Aligned_cols=65 Identities=17% Similarity=0.223 Sum_probs=40.0
Q ss_pred ChHHHHHHHHH----HHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecC-CCCCh
Q 012982 143 DQISVAKHLFA----AITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGN-GLTDP 216 (452)
Q Consensus 143 ~~~~~a~d~~~----fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~ign-g~~~p 216 (452)
.....|..+.. .|++-+..+|+| ++.|+|||.||-.+..++..+.++. . .-++..+..+. ++++.
T Consensus 225 Gml~AArwI~~~i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLRe~~-~-----fssi~CyAFgPp~cvS~ 294 (633)
T PLN02847 225 GMVAAARWIAKLSTPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILREQK-E-----FSSTTCVTFAPAACMTW 294 (633)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHhcCC-C-----CCCceEEEecCchhcCH
Confidence 35455554444 444555667765 7999999999998888876554322 1 12566666665 34444
No 171
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=56.28 E-value=29 Score=33.13 Aligned_cols=78 Identities=15% Similarity=0.137 Sum_probs=48.3
Q ss_pred ccceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCC-CCCCEEEEeccCCccchhHHHHHHHHhccc
Q 012982 117 IFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLF-KNRPIYITGESYAGKYVPAIGYFILKQNKQ 195 (452)
Q Consensus 117 ~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~-~~~~~yl~GESYgG~yvP~lA~~i~~~n~~ 195 (452)
..|++=.| =.|-|.|...... .+..+.. ++.-+|++. .+ +..+++|+|.|-|..= +-.+..+
T Consensus 88 n~nv~~~D-YSGyG~S~G~psE---~n~y~Di----~avye~Lr~--~~g~~~~Iil~G~SiGt~~----tv~Lasr--- 150 (258)
T KOG1552|consen 88 NCNVVSYD-YSGYGRSSGKPSE---RNLYADI----KAVYEWLRN--RYGSPERIILYGQSIGTVP----TVDLASR--- 150 (258)
T ss_pred cceEEEEe-cccccccCCCccc---ccchhhH----HHHHHHHHh--hcCCCceEEEEEecCCchh----hhhHhhc---
Confidence 34566778 6699999543221 1333223 345555554 34 5789999999999843 2222221
Q ss_pred CCCCceeecceeEecCCCCChh
Q 012982 196 LPSSKRVNLQGVAIGNGLTDPA 217 (452)
Q Consensus 196 ~~~~~~inLkGi~igng~~~p~ 217 (452)
..+.|+++-+|+++-.
T Consensus 151 ------~~~~alVL~SPf~S~~ 166 (258)
T KOG1552|consen 151 ------YPLAAVVLHSPFTSGM 166 (258)
T ss_pred ------CCcceEEEeccchhhh
Confidence 1388999999988753
No 172
>PLN02934 triacylglycerol lipase
Probab=54.47 E-value=17 Score=38.22 Aligned_cols=39 Identities=10% Similarity=0.156 Sum_probs=31.0
Q ss_pred HHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHH
Q 012982 150 HLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILK 191 (452)
Q Consensus 150 d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~ 191 (452)
.+...|+++++++|. .+++++|||-||-.+...|..+..
T Consensus 306 ~v~~~lk~ll~~~p~---~kIvVTGHSLGGALAtLaA~~L~l 344 (515)
T PLN02934 306 AVRSKLKSLLKEHKN---AKFVVTGHSLGGALAILFPTVLVL 344 (515)
T ss_pred HHHHHHHHHHHHCCC---CeEEEeccccHHHHHHHHHHHHHH
Confidence 466778888887765 579999999999988888766654
No 173
>PLN02162 triacylglycerol lipase
Probab=54.25 E-value=14 Score=38.34 Aligned_cols=39 Identities=10% Similarity=0.093 Sum_probs=29.4
Q ss_pred HHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHH
Q 012982 150 HLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILK 191 (452)
Q Consensus 150 d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~ 191 (452)
.+.+.|++.+.++|+ .+++++|||-||-.+...|..+..
T Consensus 263 ~I~~~L~~lL~k~p~---~kliVTGHSLGGALAtLaAa~L~~ 301 (475)
T PLN02162 263 TIRQMLRDKLARNKN---LKYILTGHSLGGALAALFPAILAI 301 (475)
T ss_pred HHHHHHHHHHHhCCC---ceEEEEecChHHHHHHHHHHHHHH
Confidence 455567777777664 579999999999888777766654
No 174
>PLN02802 triacylglycerol lipase
Probab=54.21 E-value=27 Score=36.74 Aligned_cols=63 Identities=10% Similarity=0.049 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCC
Q 012982 146 SVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLT 214 (452)
Q Consensus 146 ~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~ 214 (452)
.+.+++.+-|+.+++++|.. ...++|+|||-||-.+-..|..|.+.... ...+..+..|.|-+
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e-~~sI~VTGHSLGGALAtLaA~dL~~~~~~-----~~pV~vyTFGsPRV 371 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGE-ELSITVTGHSLGAALALLVADELATCVPA-----APPVAVFSFGGPRV 371 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCC-cceEEEeccchHHHHHHHHHHHHHHhCCC-----CCceEEEEcCCCCc
Confidence 45667777788888776532 24799999999999998888888664321 12344455555554
No 175
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=53.53 E-value=33 Score=32.61 Aligned_cols=59 Identities=20% Similarity=0.259 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHhhh-CCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCChh
Q 012982 146 SVAKHLFAAITGFINL-DPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDPA 217 (452)
Q Consensus 146 ~~a~d~~~fL~~f~~~-fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p~ 217 (452)
+.++++..++++++.. +.+ ....+-|. |||---|.=+..+.+.. ++.|+++|.+..++.
T Consensus 176 ~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~~---------~vDG~LVG~Asl~~~ 235 (242)
T cd00311 176 EQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQP---------DIDGVLVGGASLKAE 235 (242)
T ss_pred HHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcCC---------CCCEEEeehHhhCHH
Confidence 3467788889998864 222 22344444 99999999998888753 689999999988754
No 176
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=52.83 E-value=3.3e+02 Score=29.36 Aligned_cols=28 Identities=7% Similarity=-0.142 Sum_probs=25.1
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcc
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMK 371 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~ 371 (452)
+++|+++.|..|.|+|+..+....+.+.
T Consensus 441 ~~Pvl~va~~~DHIvPw~s~~~~~~l~g 468 (560)
T TIGR01839 441 KCDSFSVAGTNDHITPWDAVYRSALLLG 468 (560)
T ss_pred CCCeEEEecCcCCcCCHHHHHHHHHHcC
Confidence 4799999999999999999999887764
No 177
>PLN02442 S-formylglutathione hydrolase
Probab=52.22 E-value=8.4 Score=37.37 Aligned_cols=47 Identities=19% Similarity=0.122 Sum_probs=34.6
Q ss_pred ceeEEEEeccCCccCChh-hHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccC
Q 012982 344 NTKVLLYQGHFDLRDGVV-STEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVP 415 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~-g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp 415 (452)
+.+|++.+|+.|.+|+.. .++.+.+.++-.+ .+.++..+.+++|...
T Consensus 217 ~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g-------------------------~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 217 SATILIDQGEADKFLKEQLLPENFEEACKEAG-------------------------APVTLRLQPGYDHSYF 264 (283)
T ss_pred CCCEEEEECCCCccccccccHHHHHHHHHHcC-------------------------CCeEEEEeCCCCccHH
Confidence 479999999999999874 4666666653111 1357889999999755
No 178
>PF05049 IIGP: Interferon-inducible GTPase (IIGP); InterPro: IPR007743 Interferon-inducible GTPase (IIGP) is thought to play a role in in intracellular defence. IIGP is predominantly associated with the Golgi apparatus and also localizes to the endoplasmic reticulum and exerts a distinct role in IFN-induced intracellular membrane trafficking or processing [].; GO: 0005525 GTP binding, 0016817 hydrolase activity, acting on acid anhydrides, 0016020 membrane; PDB: 1TPZ_A 1TQD_A 1TQ6_A 1TQ2_B 1TQ4_A.
Probab=52.11 E-value=12 Score=38.01 Aligned_cols=62 Identities=24% Similarity=0.368 Sum_probs=36.0
Q ss_pred CCCEEEEecCCCCh--hhhhhhhhcccCeEEccCCcc--cccccccccCCCCcccccceeeeecCCCcce
Q 012982 66 QTPLLIWLQGGPGC--SSMTGNFLELGPWRVTLSQRQ--NAEQLSLKPNPGSWNRIFGLLFIDNPIGAGF 131 (452)
Q Consensus 66 ~~PlilWlnGGPG~--SS~~g~f~e~GP~~i~~~~~~--~~~~~~l~~N~~SW~~~anllfiDqPvGtGf 131 (452)
+.|+=|-+-|.+|+ ||+.-.+-++|+=. ++.+ +...-+..+.+|.--+.-||.+||-| |+|=
T Consensus 33 ~~~l~IaV~G~sGsGKSSfINalrGl~~~d---~~aA~tGv~etT~~~~~Y~~p~~pnv~lWDlP-G~gt 98 (376)
T PF05049_consen 33 NAPLNIAVTGESGSGKSSFINALRGLGHED---EGAAPTGVVETTMEPTPYPHPKFPNVTLWDLP-GIGT 98 (376)
T ss_dssp H--EEEEEEESTTSSHHHHHHHHTT--TTS---TTS--SSSHSCCTS-EEEE-SS-TTEEEEEE---GGG
T ss_pred cCceEEEEECCCCCCHHHHHHHHhCCCCCC---cCcCCCCCCcCCCCCeeCCCCCCCCCeEEeCC-CCCC
Confidence 46888999997766 99998888877731 1111 11122566677777888999999987 7773
No 179
>PLN03037 lipase class 3 family protein; Provisional
Probab=51.76 E-value=32 Score=36.30 Aligned_cols=46 Identities=15% Similarity=0.224 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHhhhCCCC-CCCCEEEEeccCCccchhHHHHHHHHh
Q 012982 147 VAKHLFAAITGFINLDPLF-KNRPIYITGESYAGKYVPAIGYFILKQ 192 (452)
Q Consensus 147 ~a~d~~~fL~~f~~~fp~~-~~~~~yl~GESYgG~yvP~lA~~i~~~ 192 (452)
+.+++.+.|+...+.+++. ....++|+|||.||-.+-..|..|.+.
T Consensus 296 areQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~ 342 (525)
T PLN03037 296 ASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARS 342 (525)
T ss_pred hHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHh
Confidence 3345556666666665532 345799999999999988888777664
No 180
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=51.30 E-value=97 Score=32.48 Aligned_cols=41 Identities=15% Similarity=0.135 Sum_probs=32.0
Q ss_pred ChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchh
Q 012982 143 DQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVP 183 (452)
Q Consensus 143 ~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP 183 (452)
+..|+-.|+.+|+++--.+|+.-.+.|++.+|-||.|....
T Consensus 147 Ss~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsA 187 (514)
T KOG2182|consen 147 SSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSA 187 (514)
T ss_pred hHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHH
Confidence 56788889999988887888654455999999999994433
No 181
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=51.19 E-value=11 Score=34.82 Aligned_cols=72 Identities=8% Similarity=0.091 Sum_probs=46.0
Q ss_pred CcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeeccee
Q 012982 128 GAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGV 207 (452)
Q Consensus 128 GtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi 207 (452)
-+||-+++ ...+.+++..++.++++=-++.+|.- +.+-+.|+|-|.|.+.....++.+ -.+.|+
T Consensus 102 svgY~l~~----q~htL~qt~~~~~~gv~filk~~~n~--k~l~~gGHSaGAHLa~qav~R~r~----------prI~gl 165 (270)
T KOG4627|consen 102 SVGYNLCP----QVHTLEQTMTQFTHGVNFILKYTENT--KVLTFGGHSAGAHLAAQAVMRQRS----------PRIWGL 165 (270)
T ss_pred EeccCcCc----ccccHHHHHHHHHHHHHHHHHhcccc--eeEEEcccchHHHHHHHHHHHhcC----------chHHHH
Confidence 34555432 23577888888888777666766543 348888999998766555544321 256777
Q ss_pred EecCCCCC
Q 012982 208 AIGNGLTD 215 (452)
Q Consensus 208 ~igng~~~ 215 (452)
++-.|+-+
T Consensus 166 ~l~~GvY~ 173 (270)
T KOG4627|consen 166 ILLCGVYD 173 (270)
T ss_pred HHHhhHhh
Confidence 76666543
No 182
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=51.05 E-value=22 Score=36.26 Aligned_cols=39 Identities=10% Similarity=0.068 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHH
Q 012982 147 VAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFI 189 (452)
Q Consensus 147 ~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i 189 (452)
....+...++.-++. .++++.|+|||+||.++-.+-...
T Consensus 102 ~~~~lk~~ie~~~~~----~~~kv~li~HSmGgl~~~~fl~~~ 140 (389)
T PF02450_consen 102 YFTKLKQLIEEAYKK----NGKKVVLIAHSMGGLVARYFLQWM 140 (389)
T ss_pred HHHHHHHHHHHHHHh----cCCcEEEEEeCCCchHHHHHHHhc
Confidence 344444444444432 388999999999996665554444
No 183
>COG3117 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=50.27 E-value=14 Score=33.45 Aligned_cols=109 Identities=9% Similarity=0.056 Sum_probs=54.8
Q ss_pred CCccchH--HHHHHHHHhhcCCCCCC-----CCCCCCCCCceeeeee--cCCCCCceEEEEEEE--ecCCC--CCCCCCC
Q 012982 1 MKSTTTI--YFLFCFFFFLHHSPSSS-----SLLPKEALPTKSGYLP--VNPATGSAIFYAYYE--AQTPI--TSSLSQT 67 (452)
Q Consensus 1 ~~~~~~~--~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~sGyl~--v~~~~~~~lfy~~~e--s~~~~--~~~~~~~ 67 (452)
||+.||| ||||+.+|+++=..+.. ...|+.+.|+|+|.=. +.=++.+.+-|.+.- .++-. +.--=+.
T Consensus 1 ~~~~Rw~~~ILll~a~~~~~w~~~~~~~~~~~v~~~~d~p~Y~~e~~~~~~~de~G~~~y~l~a~~~eh~~~~~~t~ft~ 80 (188)
T COG3117 1 SMSRRWVYLILLLAALALSGWLLGLEQDEIEQVRPNPDEPAYTMEGLDTTVYDEQGKLKYRLTAQHVEHYSDSSDTHFTA 80 (188)
T ss_pred CcchhHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCceeecCcceeEECCCcceeEEeehhhhhhcccccceEEec
Confidence 6889999 55555556555444433 3346667777765422 111124666666542 11110 0012356
Q ss_pred CEEEEecCCCChhhhhhhhhccc-CeEEccCCcccccccccccCCCCcccccceeeeecCCCc
Q 012982 68 PLLIWLQGGPGCSSMTGNFLELG-PWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDNPIGA 129 (452)
Q Consensus 68 PlilWlnGGPG~SS~~g~f~e~G-P~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDqPvGt 129 (452)
|++..+.+ ++ ++.+..+. ...-++......-|++=.+-+.+.
T Consensus 81 P~l~lf~e-------------~~q~w~v~Ad~-------a~l~~d~~l~l~~~vvv~~~t~d~ 123 (188)
T COG3117 81 PVLTLFRE-------------NRQTWTVQADR-------AKLTKDGKLYLLGDVVVVALTPDS 123 (188)
T ss_pred ceEEEEcC-------------CCccEEEEhhh-------heecCCceEEEEeceeEEeecCCc
Confidence 88887743 32 34454443 223333445555556655655555
No 184
>PTZ00333 triosephosphate isomerase; Provisional
Probab=50.25 E-value=30 Score=33.17 Aligned_cols=60 Identities=18% Similarity=0.196 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHhhh-CCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCCh
Q 012982 145 ISVAKHLFAAITGFINL-DPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDP 216 (452)
Q Consensus 145 ~~~a~d~~~fL~~f~~~-fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p 216 (452)
.+.++++..++++++.. +-+.....+-|. |||---|.-+..+.... ++.|++||....++
T Consensus 182 ~e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~~---------~vDG~LvG~asl~~ 242 (255)
T PTZ00333 182 PEQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQP---------DIDGFLVGGASLKP 242 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcCC---------CCCEEEEehHhhhh
Confidence 35678888899998853 221122234444 99999999999987743 79999999988764
No 185
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=49.04 E-value=10 Score=24.58 Aligned_cols=12 Identities=50% Similarity=0.988 Sum_probs=6.5
Q ss_pred CEEEEecCCCCh
Q 012982 68 PLLIWLQGGPGC 79 (452)
Q Consensus 68 PlilWlnGGPG~ 79 (452)
-=+|||+|-||-
T Consensus 25 gRTiWFqGdPGp 36 (39)
T PF09292_consen 25 GRTIWFQGDPGP 36 (39)
T ss_dssp S-EEEESS---T
T ss_pred CCEEEeeCCCCC
Confidence 458999999983
No 186
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=48.40 E-value=11 Score=29.29 Aligned_cols=27 Identities=15% Similarity=0.413 Sum_probs=23.4
Q ss_pred HHHHHHHHHHhhhCCCCCCCCEEEEeccC
Q 012982 149 KHLFAAITGFINLDPLFKNRPIYITGESY 177 (452)
Q Consensus 149 ~d~~~fL~~f~~~fp~~~~~~~yl~GESY 177 (452)
-|++++.+.|+-.+ |-.+++.+.|+||
T Consensus 7 vdIYDAvRaflLr~--Y~~KrfIV~g~S~ 33 (100)
T PF07389_consen 7 VDIYDAVRAFLLRH--YYDKRFIVYGRSN 33 (100)
T ss_pred hhHHHHHHHHHHHH--HccceEEEecchH
Confidence 47889999999875 7788999999999
No 187
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=46.86 E-value=49 Score=31.60 Aligned_cols=75 Identities=17% Similarity=0.245 Sum_probs=51.0
Q ss_pred eeeeec--CCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhh-CCCCCCCCEEEEeccCCccchhHHHHHHHHhcccC
Q 012982 120 LLFIDN--PIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINL-DPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQL 196 (452)
Q Consensus 120 llfiDq--PvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~-fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~ 196 (452)
+|=.++ -+|||-+- ..+.++++.+++++++.. +. -....+-|. |||---|.-+..+....
T Consensus 162 vIAYEPvWAIGtG~~a----------s~~~~~~v~~~Ir~~l~~~~~-~~~~~~~Il---YGGSV~~~N~~~l~~~~--- 224 (250)
T PRK00042 162 VIAYEPVWAIGTGKTA----------TPEQAQEVHAFIRAVLAELYG-EVAEKVRIL---YGGSVKPDNAAELMAQP--- 224 (250)
T ss_pred EEEECCHHHhCCCCCC----------CHHHHHHHHHHHHHHHHHhcc-cccCCceEE---EcCCCCHHHHHHHhcCC---
Confidence 344552 26777761 224577888999998863 21 112334444 99999999998887643
Q ss_pred CCCceeecceeEecCCCCChh
Q 012982 197 PSSKRVNLQGVAIGNGLTDPA 217 (452)
Q Consensus 197 ~~~~~inLkGi~igng~~~p~ 217 (452)
++.|++||.+..++.
T Consensus 225 ------~vDG~LVG~Asl~~~ 239 (250)
T PRK00042 225 ------DIDGALVGGASLKAE 239 (250)
T ss_pred ------CCCEEEEeeeeechH
Confidence 789999999988764
No 188
>PRK13792 lysozyme inhibitor; Provisional
Probab=46.22 E-value=1.4e+02 Score=25.36 Aligned_cols=26 Identities=15% Similarity=0.111 Sum_probs=16.2
Q ss_pred CCccchHHHHHHHHHhhcCCCCCCCCCC
Q 012982 1 MKSTTTIYFLFCFFFFLHHSPSSSSLLP 28 (452)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 28 (452)
||+. +.+|||.+.+|-.+|+..+..|
T Consensus 1 mk~~--l~~ll~~~~~lLsaCs~~~~~~ 26 (127)
T PRK13792 1 MKKA--LWLLLAAVPVVLVACGGSDDDK 26 (127)
T ss_pred ChhH--HHHHHHHHHhheecccCCCCCc
Confidence 8876 4555555555566677765544
No 189
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=46.20 E-value=18 Score=33.34 Aligned_cols=48 Identities=21% Similarity=0.197 Sum_probs=30.4
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCCCH
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQPL 420 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dqP~ 420 (452)
++++|-+.|..|.+++...++...+... . . ..+...++||.+|...++
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~~--------~--------------------~-~~v~~h~gGH~vP~~~~~ 208 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMFD--------P--------------------D-ARVIEHDGGHHVPRKKED 208 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHHH--------H--------------------H-EEEEEESSSSS----HHH
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhcc--------C--------------------C-cEEEEECCCCcCcCChhh
Confidence 4899999999999999887777765542 1 1 257788999999987664
No 190
>PF07265 TAP35_44: Tapetum specific protein TAP35/TAP44; InterPro: IPR009891 This family consists of several plant tapetum specific proteins. Members of this family are found in Arabidopsis thaliana, Brassica napus and Sinapis alba. Members of this family may be involved in sporopollenin formation and/or deposition [].
Probab=45.98 E-value=15 Score=29.48 Aligned_cols=18 Identities=28% Similarity=0.604 Sum_probs=11.5
Q ss_pred CCccchH---HHHHHHHHhhc
Q 012982 1 MKSTTTI---YFLFCFFFFLH 18 (452)
Q Consensus 1 ~~~~~~~---~~~~~~~~~~~ 18 (452)
|.+|+-| ||||+++|||.
T Consensus 1 MS~iSk~sslcLlll~~ff~s 21 (119)
T PF07265_consen 1 MSKISKVSSLCLLLLVVFFLS 21 (119)
T ss_pred CchhHHHHHHHHHHHHHHHHc
Confidence 5566655 77777766654
No 191
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=45.45 E-value=51 Score=30.82 Aligned_cols=57 Identities=21% Similarity=0.286 Sum_probs=40.7
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCCCH--H
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQPL--N 421 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dqP~--~ 421 (452)
+++-|-+-|+.|.++|..-++..++.-. + ..+....+||+||.-.|. .
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~~~-----------------------------~-a~vl~HpggH~VP~~~~~~~~ 212 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAESFK-----------------------------D-ATVLEHPGGHIVPNKAKYKEK 212 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHhcC-----------------------------C-CeEEecCCCccCCCchHHHHH
Confidence 4788999999999999988877776642 1 157788999999986542 2
Q ss_pred HHHHHHHHH
Q 012982 422 SQIMIEDWV 430 (452)
Q Consensus 422 ~~~~i~~fl 430 (452)
+.+.|+.++
T Consensus 213 i~~fi~~~~ 221 (230)
T KOG2551|consen 213 IADFIQSFL 221 (230)
T ss_pred HHHHHHHHH
Confidence 334444444
No 192
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=44.93 E-value=24 Score=35.28 Aligned_cols=41 Identities=29% Similarity=0.434 Sum_probs=31.3
Q ss_pred HHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhc
Q 012982 150 HLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQN 193 (452)
Q Consensus 150 d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n 193 (452)
.+.+-++.....+| +..++++|+|-||-++...|..|....
T Consensus 156 ~~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~ 196 (336)
T KOG4569|consen 156 GLDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNG 196 (336)
T ss_pred HHHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcC
Confidence 33344555556555 558999999999999999999998864
No 193
>PRK07868 acyl-CoA synthetase; Validated
Probab=44.48 E-value=53 Score=38.00 Aligned_cols=21 Identities=19% Similarity=0.279 Sum_probs=17.2
Q ss_pred CCCEEEEeccCCccchhHHHH
Q 012982 167 NRPIYITGESYAGKYVPAIGY 187 (452)
Q Consensus 167 ~~~~yl~GESYgG~yvP~lA~ 187 (452)
..+++|+|.|.||..+-.+|.
T Consensus 140 ~~~v~lvG~s~GG~~a~~~aa 160 (994)
T PRK07868 140 GRDVHLVGYSQGGMFCYQAAA 160 (994)
T ss_pred CCceEEEEEChhHHHHHHHHH
Confidence 458999999999987766654
No 194
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=44.45 E-value=59 Score=29.72 Aligned_cols=48 Identities=27% Similarity=0.262 Sum_probs=32.3
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCC
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPT 416 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~ 416 (452)
+.+|++..|..|..++....+.+.+.|+-.+. .+.+.++.|++|-...
T Consensus 145 ~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~-------------------------~~~~~~y~ga~HgF~~ 192 (218)
T PF01738_consen 145 KAPVLILFGENDPFFPPEEVEALEEALKAAGV-------------------------DVEVHVYPGAGHGFAN 192 (218)
T ss_dssp -S-EEEEEETT-TTS-HHHHHHHHHHHHCTTT-------------------------TEEEEEETT--TTTTS
T ss_pred CCCEeecCccCCCCCChHHHHHHHHHHHhcCC-------------------------cEEEEECCCCcccccC
Confidence 37999999999999999998888888743222 3467888889997443
No 195
>PRK14565 triosephosphate isomerase; Provisional
Probab=43.85 E-value=49 Score=31.31 Aligned_cols=53 Identities=21% Similarity=0.229 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCChhh
Q 012982 146 SVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDPAT 218 (452)
Q Consensus 146 ~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p~~ 218 (452)
+.++++.++++++.. .+-|. |||---|.-+..+.+.. ++.|++||.+..++..
T Consensus 174 e~i~~~~~~Ir~~~~--------~~~Il---YGGSV~~~N~~~l~~~~---------~iDG~LvG~asl~~~~ 226 (237)
T PRK14565 174 DAIAEAFEIIRSYDS--------KSHII---YGGSVNQENIRDLKSIN---------QLSGVLVGSASLDVDS 226 (237)
T ss_pred HHHHHHHHHHHHhCC--------CceEE---EcCccCHhhHHHHhcCC---------CCCEEEEechhhcHHH
Confidence 457777888887631 22333 99999999999988742 7999999999988653
No 196
>PRK15492 triosephosphate isomerase; Provisional
Probab=41.33 E-value=60 Score=31.20 Aligned_cols=60 Identities=18% Similarity=0.133 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHhhh-CCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCChhh
Q 012982 146 SVAKHLFAAITGFINL-DPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDPAT 218 (452)
Q Consensus 146 ~~a~d~~~fL~~f~~~-fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p~~ 218 (452)
+.+++..+++++++.. +-+- ...+-|. |||---|.-+..|.... ++.|++||..-.++..
T Consensus 189 e~~~~~~~~Ir~~l~~~~~~~-~~~irIL---YGGSV~~~N~~~l~~~~---------diDG~LvG~aSl~~~~ 249 (260)
T PRK15492 189 DYADEKHAVIKQCLIELFGDA-GDDIPVF---YGGSVNAENANELFGQP---------HIDGLFIGRSAWDADK 249 (260)
T ss_pred HHHHHHHHHHHHHHHHHhccc-cCceeEE---EcCccCHHHHHHHhcCC---------CCCEEEeehhhcCHHH
Confidence 3457778889988742 3221 2345555 99999999999998753 7999999999888753
No 197
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=40.79 E-value=15 Score=33.31 Aligned_cols=15 Identities=40% Similarity=0.995 Sum_probs=13.1
Q ss_pred CCCEEEEecCCCChh
Q 012982 66 QTPLLIWLQGGPGCS 80 (452)
Q Consensus 66 ~~PlilWlnGGPG~S 80 (452)
+.|-|+|.=|||||.
T Consensus 6 ~~~~IifVlGGPGsg 20 (195)
T KOG3079|consen 6 DKPPIIFVLGGPGSG 20 (195)
T ss_pred cCCCEEEEEcCCCCC
Confidence 578899999999994
No 198
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=40.65 E-value=24 Score=32.25 Aligned_cols=58 Identities=14% Similarity=0.141 Sum_probs=33.7
Q ss_pred CCCcceeeccCCCCCCCChHHHHHHHHHHHHHHh-hhCCCCCCCCEEEEeccCCccchhHHHHHHHH
Q 012982 126 PIGAGFSFAATNDEIPRDQISVAKHLFAAITGFI-NLDPLFKNRPIYITGESYAGKYVPAIGYFILK 191 (452)
Q Consensus 126 PvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~-~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~ 191 (452)
=.|||-|-..-+.+. .+-+.|.. ...|+ .++|+-+ -+.|.|-|+|+..+-.+|.+..+
T Consensus 68 fRgVG~S~G~fD~Gi--GE~~Da~a----aldW~~~~hp~s~--~~~l~GfSFGa~Ia~~la~r~~e 126 (210)
T COG2945 68 FRGVGRSQGEFDNGI--GELEDAAA----ALDWLQARHPDSA--SCWLAGFSFGAYIAMQLAMRRPE 126 (210)
T ss_pred ccccccccCcccCCc--chHHHHHH----HHHHHHhhCCCch--hhhhcccchHHHHHHHHHHhccc
Confidence 689999965432221 23223333 33444 4566532 26999999999666666655544
No 199
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=40.63 E-value=32 Score=34.15 Aligned_cols=52 Identities=17% Similarity=-0.039 Sum_probs=35.0
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCC-CHHH
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQ-PLNS 422 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dq-P~~~ 422 (452)
+.+|++-.|-.|.+||..++-+..++|.=+ + ...+....||..+.+. -+..
T Consensus 262 ~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~-K---------------------------~l~vyp~~~He~~~~~~~~~~ 313 (320)
T PF05448_consen 262 KCPVLFSVGLQDPVCPPSTQFAAYNAIPGP-K---------------------------ELVVYPEYGHEYGPEFQEDKQ 313 (320)
T ss_dssp -SEEEEEEETT-SSS-HHHHHHHHCC--SS-E---------------------------EEEEETT--SSTTHHHHHHHH
T ss_pred CCCEEEEEecCCCCCCchhHHHHHhccCCC-e---------------------------eEEeccCcCCCchhhHHHHHH
Confidence 379999999999999999999999998522 1 3688899999876554 4433
Q ss_pred H
Q 012982 423 Q 423 (452)
Q Consensus 423 ~ 423 (452)
+
T Consensus 314 ~ 314 (320)
T PF05448_consen 314 L 314 (320)
T ss_dssp H
T ss_pred H
Confidence 3
No 200
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=40.55 E-value=22 Score=32.89 Aligned_cols=48 Identities=27% Similarity=0.326 Sum_probs=29.3
Q ss_pred ceeEEEEeccCCccCChhhHH-HHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCcccc
Q 012982 344 NTKVLLYQGHFDLRDGVVSTE-AWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLV 414 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~-~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmv 414 (452)
+.+||+++|..|.+.|..-.. ..+++|+-.+.. -+++.+.+.+|||++
T Consensus 115 ~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~-----------------------~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 115 KGPILLISGEDDQIWPSSEMAEQIEERLKAAGFP-----------------------HNVEHLSYPGAGHLI 163 (213)
T ss_dssp -SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT----------------------------EEEEETTB-S--
T ss_pred CCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCC-----------------------CcceEEEcCCCCcee
Confidence 479999999999999877755 455667533322 145789999999995
No 201
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=39.66 E-value=22 Score=36.14 Aligned_cols=39 Identities=18% Similarity=0.248 Sum_probs=21.6
Q ss_pred CCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCChhh
Q 012982 168 RPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDPAT 218 (452)
Q Consensus 168 ~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p~~ 218 (452)
.++-++||||||-- |.+.+.+. ..++..++-+||.-|..
T Consensus 228 ~~i~~~GHSFGGAT----a~~~l~~d--------~r~~~~I~LD~W~~Pl~ 266 (379)
T PF03403_consen 228 SRIGLAGHSFGGAT----ALQALRQD--------TRFKAGILLDPWMFPLG 266 (379)
T ss_dssp EEEEEEEETHHHHH----HHHHHHH---------TT--EEEEES---TTS-
T ss_pred hheeeeecCchHHH----HHHHHhhc--------cCcceEEEeCCcccCCC
Confidence 36899999999932 32332222 25778889999988753
No 202
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=39.64 E-value=4.2e+02 Score=26.83 Aligned_cols=62 Identities=13% Similarity=-0.016 Sum_probs=48.5
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCCCHHHH
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQPLNSQ 423 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dqP~~~~ 423 (452)
+.|||+..=..|+..|..-.++..+.|.-.+. | ....-..||-...-..+...
T Consensus 306 ~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~--~-------------------------~~i~S~~GHDaFL~e~~~~~ 358 (368)
T COG2021 306 KAPVLVVGITSDWLFPPELQRALAEALPAAGA--L-------------------------REIDSPYGHDAFLVESEAVG 358 (368)
T ss_pred ccCEEEEEecccccCCHHHHHHHHHhccccCc--e-------------------------EEecCCCCchhhhcchhhhh
Confidence 47999999999999999999999988853322 1 13334459999888888888
Q ss_pred HHHHHHHcC
Q 012982 424 IMIEDWVLD 432 (452)
Q Consensus 424 ~~i~~fl~~ 432 (452)
..|+.||..
T Consensus 359 ~~i~~fL~~ 367 (368)
T COG2021 359 PLIRKFLAL 367 (368)
T ss_pred HHHHHHhhc
Confidence 999999853
No 203
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=39.44 E-value=39 Score=37.36 Aligned_cols=92 Identities=18% Similarity=0.306 Sum_probs=50.2
Q ss_pred EEEecCCCCh-------hhhhhhhhcccCeEEccCCcccccccccccCCCCcccccceeeeecCCCcceeeccCCCCCCC
Q 012982 70 LIWLQGGPGC-------SSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPR 142 (452)
Q Consensus 70 ilWlnGGPG~-------SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~ 142 (452)
+|++-|--|+ +|...+-...||++=.. -..||++. +-.-+| ..==||- =.-.
T Consensus 92 VLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~----------~~d~~~~~----DFFaVD--FnEe~tA-----m~G~ 150 (973)
T KOG3724|consen 92 VLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTE----------DRDNPFSF----DFFAVD--FNEEFTA-----MHGH 150 (973)
T ss_pred EEEecCCCCchHHHHHHHHHHhhhhcCCchhhhh----------cccCcccc----ceEEEc--ccchhhh-----hccH
Confidence 4667777665 23445555688887432 34555554 222233 0001110 0112
Q ss_pred ChHHHHHHHHHHHHHHh---hhCCCCC---CCCEEEEeccCCccch
Q 012982 143 DQISVAKHLFAAITGFI---NLDPLFK---NRPIYITGESYAGKYV 182 (452)
Q Consensus 143 ~~~~~a~d~~~fL~~f~---~~fp~~~---~~~~yl~GESYgG~yv 182 (452)
+..+.++.+.++++.-+ +.-+||+ ...+.|+||||||.-+
T Consensus 151 ~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVA 196 (973)
T KOG3724|consen 151 ILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVA 196 (973)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHH
Confidence 34555666666655444 4445665 5569999999999653
No 204
>COG3150 Predicted esterase [General function prediction only]
Probab=38.94 E-value=72 Score=28.58 Aligned_cols=63 Identities=22% Similarity=0.371 Sum_probs=41.6
Q ss_pred CCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCChhhh
Q 012982 140 IPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDPATQ 219 (452)
Q Consensus 140 ~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p~~q 219 (452)
.+.+..++++.+...+++ ...+..-|+|-|-||.|+..|+.+. -|+.+ |.||.+-|...
T Consensus 38 l~h~p~~a~~ele~~i~~-------~~~~~p~ivGssLGGY~At~l~~~~-------------Girav-~~NPav~P~e~ 96 (191)
T COG3150 38 LPHDPQQALKELEKAVQE-------LGDESPLIVGSSLGGYYATWLGFLC-------------GIRAV-VFNPAVRPYEL 96 (191)
T ss_pred CCCCHHHHHHHHHHHHHH-------cCCCCceEEeecchHHHHHHHHHHh-------------CChhh-hcCCCcCchhh
Confidence 566777777777766653 4455588999999997766555333 34443 56888887665
Q ss_pred hhhh
Q 012982 220 VATH 223 (452)
Q Consensus 220 ~~~~ 223 (452)
+..|
T Consensus 97 l~gy 100 (191)
T COG3150 97 LTGY 100 (191)
T ss_pred hhhh
Confidence 4443
No 205
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=38.67 E-value=54 Score=29.55 Aligned_cols=66 Identities=14% Similarity=0.056 Sum_probs=38.0
Q ss_pred cccceeeeecCCC--cceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHH
Q 012982 116 RIFGLLFIDNPIG--AGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYF 188 (452)
Q Consensus 116 ~~anllfiDqPvG--tGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~ 188 (452)
+.|-|.|++.... ...+-. .+.--+..|.++..|+..+=..+ =....+-++|||||+.-+-.-+..
T Consensus 62 ~vAvV~WlgYdaP~~~~~~a~-----~~~~A~~ga~~L~~f~~gl~a~~--~~~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPDAA-----SPGYARAGAPRLARFLDGLRATH--GPDAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred CeEEEEEcCCCCCCCcccccc-----CchHHHHHHHHHHHHHHHhhhhc--CCCCCEEEEEecchhHHHHHHhhh
Confidence 6778888763333 222210 01112445677777776665544 124579999999999665544433
No 206
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=38.64 E-value=15 Score=34.32 Aligned_cols=56 Identities=23% Similarity=0.246 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCChh
Q 012982 147 VAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDPA 217 (452)
Q Consensus 147 ~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p~ 217 (452)
+.+++..+|++=|...+ .+ ..|+|.|+||.-+-.+|.+..+ .+.+++..+|..++.
T Consensus 98 l~~el~p~i~~~~~~~~---~~-~~i~G~S~GG~~Al~~~l~~Pd-----------~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDP---DR-RAIAGHSMGGYGALYLALRHPD-----------LFGAVIAFSGALDPS 153 (251)
T ss_dssp HHTHHHHHHHHHSSEEE---CC-EEEEEETHHHHHHHHHHHHSTT-----------TESEEEEESEESETT
T ss_pred hhccchhHHHHhccccc---ce-eEEeccCCCcHHHHHHHHhCcc-----------ccccccccCcccccc
Confidence 34455555555444332 22 8999999999666665555433 467777777776654
No 207
>PF06414 Zeta_toxin: Zeta toxin; InterPro: IPR010488 This entry represents a domain originally identified in bacterial zeta toxin proteins, where it comprises the whole protein []. It has subsequently been found in a number of other proteins, such as polynucleotide kinase and 2',3'-cyclic-nucleotide 3'-phosphodiesterase. It appears to function as a kinase domain [, ].; GO: 0005524 ATP binding, 0016301 kinase activity; PDB: 2P5T_H 1GVN_B 3Q8X_D.
Probab=37.76 E-value=28 Score=31.71 Aligned_cols=34 Identities=29% Similarity=0.539 Sum_probs=20.3
Q ss_pred CCCCCEEEEecCCCCh--hhhhhhhhc-c---cCeEEccC
Q 012982 64 LSQTPLLIWLQGGPGC--SSMTGNFLE-L---GPWRVTLS 97 (452)
Q Consensus 64 ~~~~PlilWlnGGPG~--SS~~g~f~e-~---GP~~i~~~ 97 (452)
+...|+++.+-|+||| |++...+.+ . |...|+.|
T Consensus 11 ~~~~P~~~i~aG~~GsGKSt~~~~~~~~~~~~~~v~i~~D 50 (199)
T PF06414_consen 11 PQEKPTLIIIAGQPGSGKSTLARQLLEEFGGGGIVVIDAD 50 (199)
T ss_dssp --SS-EEEEEES-TTSTTHHHHHHHHHHT-TT-SEEE-GG
T ss_pred cccCCEEEEEeCCCCCCHHHHHHHhhhhccCCCeEEEehH
Confidence 5578999999999999 677655444 2 45556655
No 208
>COG4425 Predicted membrane protein [Function unknown]
Probab=37.41 E-value=43 Score=34.52 Aligned_cols=35 Identities=29% Similarity=0.492 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCc
Q 012982 145 ISVAKHLFAAITGFINLDPLFKNRPIYITGESYAG 179 (452)
Q Consensus 145 ~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG 179 (452)
.++|+-+.+++-.+.++-|+=..-++||.|||-|.
T Consensus 374 ~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa 408 (588)
T COG4425 374 ADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGA 408 (588)
T ss_pred hhHHHHHHHHHHHHHHhCCcCCCCceEEecccccc
Confidence 46788999999999999999888899999999886
No 209
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=36.80 E-value=80 Score=30.32 Aligned_cols=41 Identities=17% Similarity=0.173 Sum_probs=27.6
Q ss_pred CCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCC
Q 012982 168 RPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLT 214 (452)
Q Consensus 168 ~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~ 214 (452)
.++.|+|||=||+-+-.+|....+ ....+++++++..+|+-
T Consensus 91 s~l~l~GHSrGGk~Af~~al~~~~------~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 91 SKLALAGHSRGGKVAFAMALGNAS------SSLDLRFSALILLDPVD 131 (259)
T ss_pred cceEEeeeCCCCHHHHHHHhhhcc------cccccceeEEEEecccc
Confidence 469999999999855444433321 11236889998887764
No 210
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=36.70 E-value=57 Score=33.52 Aligned_cols=64 Identities=16% Similarity=0.111 Sum_probs=45.0
Q ss_pred ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCC---CCCH
Q 012982 344 NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPT---DQPL 420 (452)
Q Consensus 344 ~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~---dqP~ 420 (452)
++++|.+.|..|-|||+..++...+-..--+.. .=++..+.++||+--. .-++
T Consensus 338 ~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~------------------------~k~~~~~~~~GH~Gvf~G~r~~~ 393 (406)
T TIGR01849 338 RVALLTVEGENDDISGLGQTKAALRLCTGIPED------------------------MKRHHLQPGVGHYGVFSGSRFRE 393 (406)
T ss_pred ccceEEEeccCCCcCCHHHhHHHHHHhhcCChh------------------------hceEeecCCCCeEEEeeChhhhh
Confidence 378999999999999999999888753100111 0147888899998443 3445
Q ss_pred HHHHHHHHHHc
Q 012982 421 NSQIMIEDWVL 431 (452)
Q Consensus 421 ~~~~~i~~fl~ 431 (452)
...-.|.+||.
T Consensus 394 ~i~P~i~~wl~ 404 (406)
T TIGR01849 394 EIYPLVREFIR 404 (406)
T ss_pred hhchHHHHHHH
Confidence 56667788874
No 211
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=36.36 E-value=60 Score=35.45 Aligned_cols=69 Identities=19% Similarity=0.198 Sum_probs=48.9
Q ss_pred CCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhh-CCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecc
Q 012982 127 IGAGFSFAATNDEIPRDQISVAKHLFAAITGFINL-DPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQ 205 (452)
Q Consensus 127 vGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~-fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLk 205 (452)
+|||-+- ..+.|+++..+|++++.. +-+-....+=|. |||---|.-+..|.... ++.
T Consensus 566 IGTG~~A----------t~e~aqevh~~IR~~l~~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~---------diD 623 (645)
T PRK13962 566 IGTGKVA----------TPEQAQEVHAFIRKLVAELYGEEAARKVRIL---YGGSVKSENAAGLFNQP---------DID 623 (645)
T ss_pred cCCCCCC----------CHHHHHHHHHHHHHHHHHHhChhhhccceEE---ecCCCCHhHHHHHhcCC---------CCC
Confidence 5777761 235678888999999853 211111223333 99999999999998753 799
Q ss_pred eeEecCCCCChh
Q 012982 206 GVAIGNGLTDPA 217 (452)
Q Consensus 206 Gi~igng~~~p~ 217 (452)
|++||..-.++.
T Consensus 624 G~LVGgASL~~~ 635 (645)
T PRK13962 624 GGLVGGASLKAQ 635 (645)
T ss_pred eEEeehHhcCHH
Confidence 999999988874
No 212
>COG0149 TpiA Triosephosphate isomerase [Carbohydrate transport and metabolism]
Probab=35.75 E-value=1.3e+02 Score=28.70 Aligned_cols=75 Identities=19% Similarity=0.222 Sum_probs=52.2
Q ss_pred eeeeec--CCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhh-CCCCCCCCEEEEeccCCccchhHHHHHHHHhcccC
Q 012982 120 LLFIDN--PIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINL-DPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQL 196 (452)
Q Consensus 120 llfiDq--PvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~-fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~ 196 (452)
+|=.++ .+|||-|- ..+.++.+..|++..... +.+- ..+-|- |||-.=|.=+..+..+
T Consensus 162 vIAYEPvWAIGTG~~a----------t~~~a~~v~~~Ir~~~~~~~~~~--~~v~Il---YGGSV~~~N~~e~~~~---- 222 (251)
T COG0149 162 VIAYEPVWAIGTGKSA----------SPADAEEVHAFIRAVLAELFGAE--EKVRIL---YGGSVKPGNAAELAAQ---- 222 (251)
T ss_pred EEEECCHHHhcCCCCC----------CHHHHHHHHHHHHHHHHHhcCCC--CCeEEE---EeCCcChhHHHHHhcC----
Confidence 444452 37999882 224577888889888864 2222 445555 8898888888888764
Q ss_pred CCCceeecceeEecCCCCChhh
Q 012982 197 PSSKRVNLQGVAIGNGLTDPAT 218 (452)
Q Consensus 197 ~~~~~inLkGi~igng~~~p~~ 218 (452)
.++.|+.||.+.+++..
T Consensus 223 -----~~idG~LVGgAslka~~ 239 (251)
T COG0149 223 -----PDIDGALVGGASLKADD 239 (251)
T ss_pred -----CCCCeEEEcceeecchh
Confidence 37999999999987643
No 213
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=34.13 E-value=48 Score=29.53 Aligned_cols=39 Identities=10% Similarity=0.083 Sum_probs=26.4
Q ss_pred CCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCC
Q 012982 167 NRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTD 215 (452)
Q Consensus 167 ~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~ 215 (452)
..+.+|+|+|.|+.-+-..+. ++. .-+++|+++..|.-.
T Consensus 54 ~~~~ilVaHSLGc~~~l~~l~---~~~-------~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 54 DEPTILVAHSLGCLTALRWLA---EQS-------QKKVAGALLVAPFDP 92 (171)
T ss_dssp TTTEEEEEETHHHHHHHHHHH---HTC-------CSSEEEEEEES--SC
T ss_pred CCCeEEEEeCHHHHHHHHHHh---hcc-------cccccEEEEEcCCCc
Confidence 668999999999955444433 322 238999999999854
No 214
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=32.68 E-value=46 Score=32.86 Aligned_cols=66 Identities=12% Similarity=0.182 Sum_probs=39.9
Q ss_pred ccceeeeecCCCcc-eeeccC----------CCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHH
Q 012982 117 IFGLLFIDNPIGAG-FSFAAT----------NDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAI 185 (452)
Q Consensus 117 ~anllfiDqPvGtG-fSy~~~----------~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~l 185 (452)
..-|+|.||=|||| |--... .+-......+-....|.||...|+- +..+|++|-|=|...+=.+
T Consensus 65 ~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~AYrFL~~~yep-----GD~Iy~FGFSRGAf~aRVl 139 (423)
T COG3673 65 VTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREAYRFLIFNYEP-----GDEIYAFGFSRGAFSARVL 139 (423)
T ss_pred ceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCC-----CCeEEEeeccchhHHHHHH
Confidence 44589999999988 221100 0011122344456667777776652 6789999999887554444
Q ss_pred HH
Q 012982 186 GY 187 (452)
Q Consensus 186 A~ 187 (452)
|-
T Consensus 140 ag 141 (423)
T COG3673 140 AG 141 (423)
T ss_pred HH
Confidence 43
No 215
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=32.28 E-value=69 Score=34.44 Aligned_cols=50 Identities=26% Similarity=0.161 Sum_probs=39.5
Q ss_pred HHHh-ceeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCC
Q 012982 340 FLVR-NTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTD 417 (452)
Q Consensus 340 ~Ll~-~irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~d 417 (452)
.|++ +.+||++.|..|..|.-...|..-++|.-.- ..++|.+|+|.+-.-
T Consensus 299 ~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~----------------------------elhVI~~adhsmaip 349 (784)
T KOG3253|consen 299 ALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEV----------------------------ELHVIGGADHSMAIP 349 (784)
T ss_pred hhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccc----------------------------eEEEecCCCccccCC
Confidence 4555 5899999999999999999888888875322 268899999986543
No 216
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=32.28 E-value=31 Score=30.68 Aligned_cols=28 Identities=18% Similarity=0.307 Sum_probs=23.8
Q ss_pred CCCCCCEEEEeccCCccchhHHHHHHHH
Q 012982 164 LFKNRPIYITGESYAGKYVPAIGYFILK 191 (452)
Q Consensus 164 ~~~~~~~yl~GESYgG~yvP~lA~~i~~ 191 (452)
....-|+.|-|.||||+...++|..+..
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~~A 112 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADELQA 112 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhhcC
Confidence 4556799999999999999999988754
No 217
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=31.93 E-value=70 Score=30.87 Aligned_cols=59 Identities=14% Similarity=0.079 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCC
Q 012982 146 SVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGL 213 (452)
Q Consensus 146 ~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~ 213 (452)
++++-+-+-|+.++-..-+=.-.++-|+|+|-||+-+=++|..+. ..+++.+++-.+++
T Consensus 98 ~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a---------~~lkfsaLIGiDPV 156 (307)
T PF07224_consen 98 SVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYA---------TSLKFSALIGIDPV 156 (307)
T ss_pred HHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhccc---------ccCchhheeccccc
Confidence 344444444555553322334568999999999998777776553 12456565554544
No 218
>COG3896 Chloramphenicol 3-O-phosphotransferase [Defense mechanisms]
Probab=31.49 E-value=31 Score=30.55 Aligned_cols=26 Identities=38% Similarity=0.740 Sum_probs=21.3
Q ss_pred CEEEEecCCC--Chhhhhhhhhcc--cCeE
Q 012982 68 PLLIWLQGGP--GCSSMTGNFLEL--GPWR 93 (452)
Q Consensus 68 PlilWlnGGP--G~SS~~g~f~e~--GP~~ 93 (452)
-=|+.||||| |-||+--.|+++ ||+.
T Consensus 23 griVlLNG~~saGKSSiA~A~Q~~~a~pwm 52 (205)
T COG3896 23 GRIVLLNGGSSAGKSSIALAFQDLAAEPWM 52 (205)
T ss_pred ceEEEecCCCccchhHHHHHHHHHhhcchh
Confidence 4578899999 669999999986 7874
No 219
>PF03207 OspD: Borrelia outer surface protein D (OspD); InterPro: IPR004894 This is a family of outer surface proteins from Borrelia. The function of these proteins is unknown.
Probab=31.17 E-value=30 Score=30.38 Aligned_cols=40 Identities=33% Similarity=0.411 Sum_probs=27.0
Q ss_pred CCccchHHHHHHHHHhhcCCCCCCCC-C-CCCCCCceeeeeec
Q 012982 1 MKSTTTIYFLFCFFFFLHHSPSSSSL-L-PKEALPTKSGYLPV 41 (452)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~sGyl~v 41 (452)
||+..-|.|+-+|| ||..||.-.+- + ....+.---||++-
T Consensus 1 mkklikill~slfl-llsisc~hdkqelssksnlnnqkgyldn 42 (254)
T PF03207_consen 1 MKKLIKILLLSLFL-LLSISCVHDKQELSSKSNLNNQKGYLDN 42 (254)
T ss_pred ChhHHHHHHHHHHH-HHhhhhccchhhhccccccccccccccc
Confidence 78777666666666 88889987643 2 34455556788874
No 220
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=30.35 E-value=35 Score=30.66 Aligned_cols=81 Identities=17% Similarity=0.153 Sum_probs=47.9
Q ss_pred eeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCce
Q 012982 122 FIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKR 201 (452)
Q Consensus 122 fiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~ 201 (452)
-|+-|+..+.. .+..+..+.+.++.+.|+++..+-| +.++.|+|-|=|+..+-..+.. . .+.....
T Consensus 44 ~V~YpA~~~~~------~y~~S~~~G~~~~~~~i~~~~~~CP---~~kivl~GYSQGA~V~~~~~~~----~-~l~~~~~ 109 (179)
T PF01083_consen 44 GVEYPASLGPN------SYGDSVAAGVANLVRLIEEYAARCP---NTKIVLAGYSQGAMVVGDALSG----D-GLPPDVA 109 (179)
T ss_dssp E--S---SCGG------SCHHHHHHHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHH----T-TSSHHHH
T ss_pred ecCCCCCCCcc------cccccHHHHHHHHHHHHHHHHHhCC---CCCEEEEecccccHHHHHHHHh----c-cCChhhh
Confidence 35666665552 1233456677888888999999888 5689999999999666655544 0 0000011
Q ss_pred eeccee-EecCCCCCh
Q 012982 202 VNLQGV-AIGNGLTDP 216 (452)
Q Consensus 202 inLkGi-~igng~~~p 216 (452)
=++.++ .+|||...+
T Consensus 110 ~~I~avvlfGdP~~~~ 125 (179)
T PF01083_consen 110 DRIAAVVLFGDPRRGA 125 (179)
T ss_dssp HHEEEEEEES-TTTBT
T ss_pred hhEEEEEEecCCcccC
Confidence 256665 588887643
No 221
>PRK14731 coaE dephospho-CoA kinase; Provisional
Probab=30.17 E-value=55 Score=30.09 Aligned_cols=32 Identities=25% Similarity=0.365 Sum_probs=27.1
Q ss_pred CCCEEEEecCCCCh--hhhhhhhhcccCeEEccC
Q 012982 66 QTPLLIWLQGGPGC--SSMTGNFLELGPWRVTLS 97 (452)
Q Consensus 66 ~~PlilWlnGGPG~--SS~~g~f~e~GP~~i~~~ 97 (452)
..|+++-+.||+|| |.+.-.|.+.|-..++.|
T Consensus 3 ~~~~~igitG~igsGKSt~~~~l~~~g~~v~d~D 36 (208)
T PRK14731 3 SLPFLVGVTGGIGSGKSTVCRFLAEMGCELFEAD 36 (208)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHCCCeEEecc
Confidence 45799999999999 777888888998888765
No 222
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=29.61 E-value=37 Score=31.12 Aligned_cols=55 Identities=18% Similarity=0.210 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCC
Q 012982 145 ISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNG 212 (452)
Q Consensus 145 ~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng 212 (452)
+.+..++. ....+++..|+....++-++|-|+||.++-.+|.. + -.+++++.--|
T Consensus 76 ~~~~~~~~-aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~----~--------~~~~a~v~~yg 130 (218)
T PF01738_consen 76 EQVAADLQ-AAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAAR----D--------PRVDAAVSFYG 130 (218)
T ss_dssp HHHHHHHH-HHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCC----T--------TTSSEEEEES-
T ss_pred HHHHHHHH-HHHHHHHhccccCCCcEEEEEEecchHHhhhhhhh----c--------cccceEEEEcC
Confidence 34455553 35666777776677899999999999776655422 1 14667777666
No 223
>PF08194 DIM: DIM protein; InterPro: IPR013172 Drosophila immune-induced molecules (DIMs) are short proteins induced during the immune response of Drosophila []. This entry includes DIMs 1 to 4 and DIM23.
Probab=29.61 E-value=45 Score=21.61 Aligned_cols=19 Identities=16% Similarity=0.210 Sum_probs=8.9
Q ss_pred CCccchHHHHHHHHHhhcCC
Q 012982 1 MKSTTTIYFLFCFFFFLHHS 20 (452)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~ 20 (452)
||..+-+ |+|.+|.|+..+
T Consensus 1 Mk~l~~a-~~l~lLal~~a~ 19 (36)
T PF08194_consen 1 MKCLSLA-FALLLLALAAAV 19 (36)
T ss_pred CceeHHH-HHHHHHHHHhcc
Confidence 7776652 333333344433
No 224
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=29.07 E-value=39 Score=30.84 Aligned_cols=52 Identities=23% Similarity=0.268 Sum_probs=30.6
Q ss_pred HHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCC
Q 012982 150 HLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGL 213 (452)
Q Consensus 150 d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~ 213 (452)
++.+++....+++ .....+++|+|+|.||..+-.+|.+-.+ .+.++++..|.
T Consensus 78 ~~~~~i~~~~~~~-~id~~~i~l~G~S~Gg~~a~~~a~~~p~-----------~~~~~~~~~g~ 129 (212)
T TIGR01840 78 SLHQLIDAVKANY-SIDPNRVYVTGLSAGGGMTAVLGCTYPD-----------VFAGGASNAGL 129 (212)
T ss_pred HHHHHHHHHHHhc-CcChhheEEEEECHHHHHHHHHHHhCch-----------hheEEEeecCC
Confidence 3434444333333 2345689999999999765555543211 46677666655
No 225
>PF00121 TIM: Triosephosphate isomerase; InterPro: IPR000652 Triosephosphate isomerase (5.3.1.1 from EC) (TIM) [] is the glycolytic enzyme that catalyses the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. TIM plays an important role in several metabolic pathways and is essential for efficient energy production. It is present in eukaryotes as well as in prokaryotes. TIM is a dimer of identical subunits, each of which is made up of about 250 amino-acid residues. A glutamic acid residue is involved in the catalytic mechanism [, ]. The tertiary structure of TIM has eight beta/alpha motifs folded into a barrel structure. The TIM barrel fold occurs ubiquitously and is found in numerous other enzymes that can be involved in energy metabolism, macromolecule metabolism, or small molecule metabolism []. The sequence around the active site residue is perfectly conserved in all known TIM's. Deficiencies in TIM are associated with haemolytic anaemia coupled with a progressive, severe neurological disorder [].; GO: 0004807 triose-phosphate isomerase activity, 0008152 metabolic process; PDB: 2YPI_A 1YPI_A 1NEY_B 1NF0_B 1I45_A 7TIM_A 3YPI_B 2H6R_H 2Y63_A 1N55_A ....
Probab=29.04 E-value=17 Score=34.57 Aligned_cols=70 Identities=21% Similarity=0.242 Sum_probs=45.0
Q ss_pred CCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhh-CCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeec
Q 012982 126 PIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINL-DPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNL 204 (452)
Q Consensus 126 PvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~-fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inL 204 (452)
.+|||-+- ..+.++.+.++|++++.. +.+-..+.+-|. |||---|.=+..+.... ++
T Consensus 168 AIGtG~~a----------s~~~~~~~~~~Ir~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~~---------~i 225 (244)
T PF00121_consen 168 AIGTGKTA----------SPEQIQEVHAFIREILAELYGEEVANNIRIL---YGGSVNPENAAELLSQP---------DI 225 (244)
T ss_dssp GTSSSS-C----------CHHHHHHHHHHHHHHHHHHTHHHHHHHSEEE---EESSESTTTHHHHHTST---------T-
T ss_pred cccCCCCC----------CHHHHHHHHHHHHHHHHHhccccccCceeEE---ECCcCCcccHHHHhcCC---------CC
Confidence 46887761 234577888889888743 100111223333 88888888888887643 79
Q ss_pred ceeEecCCCCChh
Q 012982 205 QGVAIGNGLTDPA 217 (452)
Q Consensus 205 kGi~igng~~~p~ 217 (452)
.|++||...+++.
T Consensus 226 DG~LVG~asl~~~ 238 (244)
T PF00121_consen 226 DGVLVGGASLKAE 238 (244)
T ss_dssp SEEEESGGGGSTH
T ss_pred CEEEEchhhhccc
Confidence 9999999988875
No 226
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=28.85 E-value=33 Score=23.16 Aligned_cols=32 Identities=28% Similarity=0.382 Sum_probs=22.6
Q ss_pred CCCChhhhhhhhHHHhhhcCCCCHHHHHHHHH
Q 012982 212 GLTDPATQVATHALNAYFSGLINERQKDELEK 243 (452)
Q Consensus 212 g~~~p~~q~~~~~~~a~~~gli~~~~~~~~~~ 243 (452)
|.+||.....--..-|+..|+||++....+.+
T Consensus 12 Giidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 12 GIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp SEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 56677665555567888999999998776654
No 227
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=28.41 E-value=23 Score=34.32 Aligned_cols=31 Identities=16% Similarity=0.375 Sum_probs=20.3
Q ss_pred HHHHhhhCCCCCCCCEEEEeccCCccchhHH
Q 012982 155 ITGFINLDPLFKNRPIYITGESYAGKYVPAI 185 (452)
Q Consensus 155 L~~f~~~fp~~~~~~~yl~GESYgG~yvP~l 185 (452)
|..|...-..|....++|+|+|-||..+..+
T Consensus 263 ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLl 293 (425)
T COG5153 263 LDILGAVRRIYPDARIWLTGHSLGGAIASLL 293 (425)
T ss_pred HHHHHHHHHhCCCceEEEeccccchHHHHHh
Confidence 3344433335667899999999999544433
No 228
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=28.41 E-value=23 Score=34.32 Aligned_cols=31 Identities=16% Similarity=0.375 Sum_probs=20.3
Q ss_pred HHHHhhhCCCCCCCCEEEEeccCCccchhHH
Q 012982 155 ITGFINLDPLFKNRPIYITGESYAGKYVPAI 185 (452)
Q Consensus 155 L~~f~~~fp~~~~~~~yl~GESYgG~yvP~l 185 (452)
|..|...-..|....++|+|+|-||..+..+
T Consensus 263 ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLl 293 (425)
T KOG4540|consen 263 LDILGAVRRIYPDARIWLTGHSLGGAIASLL 293 (425)
T ss_pred HHHHHHHHHhCCCceEEEeccccchHHHHHh
Confidence 3344433335667899999999999544433
No 229
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=27.50 E-value=91 Score=31.90 Aligned_cols=46 Identities=15% Similarity=0.219 Sum_probs=37.6
Q ss_pred CChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHH
Q 012982 142 RDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFIL 190 (452)
Q Consensus 142 ~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~ 190 (452)
++-++.|.|+-+ |.+||.+ +.+.+++.|.|-|+|--..|..-.++.
T Consensus 303 rtPe~~a~Dl~r-~i~~y~~--~w~~~~~~liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 303 RTPEQIAADLSR-LIRFYAR--RWGAKRVLLIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred CCHHHHHHHHHH-HHHHHHH--hhCcceEEEEeecccchhhHHHHHhCC
Confidence 467899999977 7777765 577889999999999999997766663
No 230
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=26.95 E-value=87 Score=28.74 Aligned_cols=55 Identities=20% Similarity=0.337 Sum_probs=37.4
Q ss_pred eeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCCCHHHHH
Q 012982 345 TKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQPLNSQI 424 (452)
Q Consensus 345 irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dqP~~~~~ 424 (452)
.+++|++|+.|-++...-...|.+.. .++.+++.+|.|+..-.-. ...+
T Consensus 150 ~~~lvi~g~~Ddvv~l~~~l~~~~~~------------------------------~~~~i~i~~a~HFF~gKl~-~l~~ 198 (210)
T COG2945 150 SPGLVIQGDADDVVDLVAVLKWQESI------------------------------KITVITIPGADHFFHGKLI-ELRD 198 (210)
T ss_pred CCceeEecChhhhhcHHHHHHhhcCC------------------------------CCceEEecCCCceecccHH-HHHH
Confidence 69999999999666544444443331 3468999999999876544 4445
Q ss_pred HHHHHH
Q 012982 425 MIEDWV 430 (452)
Q Consensus 425 ~i~~fl 430 (452)
.+.+|+
T Consensus 199 ~i~~~l 204 (210)
T COG2945 199 TIADFL 204 (210)
T ss_pred HHHHHh
Confidence 555565
No 231
>COG3596 Predicted GTPase [General function prediction only]
Probab=26.05 E-value=95 Score=30.14 Aligned_cols=59 Identities=24% Similarity=0.214 Sum_probs=35.4
Q ss_pred CCCEEEEecC--CCChhhhh-hhhh-cccCeEEccCCcccccccccccCCCCccc--ccceeeeecCCCcceee
Q 012982 66 QTPLLIWLQG--GPGCSSMT-GNFL-ELGPWRVTLSQRQNAEQLSLKPNPGSWNR--IFGLLFIDNPIGAGFSF 133 (452)
Q Consensus 66 ~~PlilWlnG--GPG~SS~~-g~f~-e~GP~~i~~~~~~~~~~~~l~~N~~SW~~--~anllfiDqPvGtGfSy 133 (452)
..||.+.+-| |=|=||++ .+|+ |.-|.....-+ ..+-.+.|.. .-+|+.+|.| |.|=+.
T Consensus 37 ~~pvnvLi~G~TG~GKSSliNALF~~~~~~v~~vg~~--------t~~~~~~~~~~~~~~l~lwDtP-G~gdg~ 101 (296)
T COG3596 37 KEPVNVLLMGATGAGKSSLINALFQGEVKEVSKVGVG--------TDITTRLRLSYDGENLVLWDTP-GLGDGK 101 (296)
T ss_pred cCceeEEEecCCCCcHHHHHHHHHhccCceeeecccC--------CCchhhHHhhccccceEEecCC-Ccccch
Confidence 5799999999 55559987 5663 33444322211 1122223332 2689999977 888873
No 232
>PF10609 ParA: ParA/MinD ATPase like; InterPro: IPR019591 This entry represents ATPases involved in plasmid partitioning []. It also contains cytosolic Fe-S cluster assembling factors, NBP35 and CFD1 which are required for biogenesis and export of both ribosomal subunits probably through assembling the ISCs in RLI1, a protein which performs rRNA processing and ribosome export [, , ].; PDB: 2PH1_A 3KB1_B.
Probab=25.57 E-value=41 Score=26.15 Aligned_cols=12 Identities=50% Similarity=0.822 Sum_probs=8.4
Q ss_pred ceeeeecCCCcc
Q 012982 119 GLLFIDNPIGAG 130 (452)
Q Consensus 119 nllfiDqPvGtG 130 (452)
+.|.||-|.|||
T Consensus 2 D~LiiD~PPGTg 13 (81)
T PF10609_consen 2 DYLIIDLPPGTG 13 (81)
T ss_dssp CEEEEE--SCSS
T ss_pred CEEEEeCCCCCC
Confidence 568899999998
No 233
>KOG3877 consensus NADH:ubiquinone oxidoreductase, NDUFA10/42kDa subunit [Energy production and conversion]
Probab=24.93 E-value=98 Score=30.07 Aligned_cols=51 Identities=24% Similarity=0.356 Sum_probs=36.6
Q ss_pred cccccceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccc
Q 012982 114 WNRIFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKY 181 (452)
Q Consensus 114 W~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~y 181 (452)
.++.+-||-||-|+|+|.|. .|+++.+ +.=|..||++.-..+|+ .|||+-.
T Consensus 67 f~enSkvI~VeGnI~sGK~k-------------lAKelAe--~Lgf~hfP~~~~d~iyv--dsyg~D~ 117 (393)
T KOG3877|consen 67 FHENSKVIVVEGNIGSGKTK-------------LAKELAE--QLGFVHFPEFRMDDIYV--DSYGNDL 117 (393)
T ss_pred hcccceEEEEeCCcccCchh-------------HHHHHHH--HhCCcccccccccceee--cccCccc
Confidence 46777899999999999982 3444433 22356799987777777 6898843
No 234
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=24.74 E-value=64 Score=33.54 Aligned_cols=76 Identities=16% Similarity=0.009 Sum_probs=46.5
Q ss_pred EEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCc---cccCCCCCHHHHH
Q 012982 348 LLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAG---HLVPTDQPLNSQI 424 (452)
Q Consensus 348 liy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AG---Hmvp~dqP~~~~~ 424 (452)
=+..||=|-.+|.... .+.. .|.+.+.+ ++-. . .-+......+.+....|+- |+--.-.++ ..+
T Consensus 377 ~~~~~DGDgTVp~~S~-~~c~--~w~g~~~~--~~~~-~------~~~~~~~~~~~~~~~~G~~~a~Hv~ilg~~~-l~e 443 (473)
T KOG2369|consen 377 GIFYGDGDGTVPLVSA-SMCA--NWQGKQFN--AGIA-V------TREEDKHQPVNLDESHGSSSAEHVDILGDEE-LLE 443 (473)
T ss_pred ceeecCCCCccchHHH-Hhhh--hhhccccc--cccc-c------ccccccCCCccccccCCccchhhhhhccChH-HHH
Confidence 3788999999999999 4444 88887644 2211 0 0111122346677777777 876665554 455
Q ss_pred HHHHHHcCCCcc
Q 012982 425 MIEDWVLDKGLF 436 (452)
Q Consensus 425 ~i~~fl~~~~~~ 436 (452)
.|.+.+.+..=-
T Consensus 444 ~i~k~~~g~~~~ 455 (473)
T KOG2369|consen 444 EILKVLLGAIDQ 455 (473)
T ss_pred HHHHHhccCCCC
Confidence 566666654443
No 235
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=24.43 E-value=95 Score=29.69 Aligned_cols=41 Identities=20% Similarity=0.173 Sum_probs=29.5
Q ss_pred CCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCCh
Q 012982 165 FKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDP 216 (452)
Q Consensus 165 ~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p 216 (452)
....+++|+|.|+||..+-.+|.+..+ .+++++..+|+.++
T Consensus 135 ~~~~~~~~~G~S~GG~~a~~~a~~~p~-----------~~~~~~~~~~~~~~ 175 (275)
T TIGR02821 135 LDGERQGITGHSMGGHGALVIALKNPD-----------RFKSVSAFAPIVAP 175 (275)
T ss_pred CCCCceEEEEEChhHHHHHHHHHhCcc-----------cceEEEEECCccCc
Confidence 345689999999999766666544322 46788888888765
No 236
>TIGR00419 tim triosephosphate isomerase. Triosephosphate isomerase (tim/TPIA) is the glycolytic enzyme that catalyzes the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. The active site of the enzyme is located between residues 240-258 of the model ([AV]-Y-E-P-[LIVM]-W-[SA]-I-G-T-[GK]) with E being the active site residue. There is a slight deviation from this sequence within the archeal members of this family.
Probab=24.27 E-value=1.3e+02 Score=27.86 Aligned_cols=70 Identities=11% Similarity=0.233 Sum_probs=44.6
Q ss_pred eeeeecC--CCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCC
Q 012982 120 LLFIDNP--IGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLP 197 (452)
Q Consensus 120 llfiDqP--vGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~ 197 (452)
+|=.+++ +|||-+- ..+.++++..+++ +-+ +... .+-|. |||---|.=+..+..+.
T Consensus 133 vIAYEPvWAIGtG~~a----------s~~~~~~v~~~ir-~~~---~~~~-~~~Il---YGGSV~~~N~~~l~~~~---- 190 (205)
T TIGR00419 133 VVAVEPPELIGTGIPV----------SPAQPEVVHGSVR-AVK---EVNE-SVRVL---CGAGISTGEDAELAAQL---- 190 (205)
T ss_pred EEEECCHHHhCCCCCC----------CHHHHHHHHHHHH-hhh---hhcC-CceEE---EeCCCCHHHHHHHhcCC----
Confidence 4555622 6777761 1234667777777 221 2222 33333 99999999998887753
Q ss_pred CCceeecceeEecCCCCCh
Q 012982 198 SSKRVNLQGVAIGNGLTDP 216 (452)
Q Consensus 198 ~~~~inLkGi~igng~~~p 216 (452)
++.|+++|.+.+++
T Consensus 191 -----~iDG~LvG~Asl~a 204 (205)
T TIGR00419 191 -----GAEGVLLASGSLKA 204 (205)
T ss_pred -----CCCEEEEeeeeecC
Confidence 78999999887654
No 237
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=24.12 E-value=47 Score=29.92 Aligned_cols=23 Identities=26% Similarity=0.418 Sum_probs=18.6
Q ss_pred CCccchHHHHHHHHHhhcCCCCC
Q 012982 1 MKSTTTIYFLFCFFFFLHHSPSS 23 (452)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~ 23 (452)
||+++.-+...||||.|.+++-.
T Consensus 1 Mkki~~als~v~ll~~~a~pa~A 23 (237)
T COG3700 1 MKKITQALSAVCLLFALASPAVA 23 (237)
T ss_pred ChhHHHHHHHHHHHHHhcchhhh
Confidence 99999988899999877766543
No 238
>cd00412 pyrophosphatase Inorganic pyrophosphatase. These enzymes hydrolyze inorganic pyrophosphate (PPi) to two molecules of orthophosphates (Pi). The reaction requires bivalent cations. The enzymes in general exist as homooligomers.
Probab=23.98 E-value=2.3e+02 Score=24.88 Aligned_cols=46 Identities=22% Similarity=0.179 Sum_probs=31.7
Q ss_pred ChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHh
Q 012982 143 DQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQ 192 (452)
Q Consensus 143 ~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~ 192 (452)
+..++...+.+-++.||+.+..+.+.+..-+ +|..-+.-|.+++++
T Consensus 107 ~l~Dl~~~~l~~I~~fF~~YK~le~~k~~~~----~g~~~~~~A~~~I~~ 152 (155)
T cd00412 107 DISDVPPHLLDEIKHFFEHYKDLEGKKEVKV----AGWKDKEEALKIIKE 152 (155)
T ss_pred ChHHCCHHHHHHHHHHHHHhcccCCCCceEE----CcCcCHHHHHHHHHH
Confidence 3455667777889999998887776443322 366677888887764
No 239
>COG0221 Ppa Inorganic pyrophosphatase [Energy production and conversion]
Probab=23.96 E-value=1.8e+02 Score=26.06 Aligned_cols=31 Identities=13% Similarity=0.216 Sum_probs=25.7
Q ss_pred ccccCCCCcccccceeeeecCCCcceeeccC
Q 012982 106 SLKPNPGSWNRIFGLLFIDNPIGAGFSFAAT 136 (452)
Q Consensus 106 ~l~~N~~SW~~~anllfiDqPvGtGfSy~~~ 136 (452)
....+.|-+.+.+..+.+|++..+++.|..+
T Consensus 23 ~~s~~KyE~dk~~~~~~vdR~l~~~~~YP~N 53 (171)
T COG0221 23 KGSNIKYEVDKETGRLLVDRPLKTPMGYPVN 53 (171)
T ss_pred CCCccceEEeeecCceeeeecCCCCCcCCcc
Confidence 4455888899999999999999999998743
No 240
>PRK06762 hypothetical protein; Provisional
Probab=23.07 E-value=47 Score=28.94 Aligned_cols=20 Identities=20% Similarity=0.493 Sum_probs=14.9
Q ss_pred CEEEEecCCCCh--hhhhhhhh
Q 012982 68 PLLIWLQGGPGC--SSMTGNFL 87 (452)
Q Consensus 68 PlilWlnGGPG~--SS~~g~f~ 87 (452)
|.++|+.|.||| |.+.-.+.
T Consensus 2 ~~li~i~G~~GsGKST~A~~L~ 23 (166)
T PRK06762 2 TTLIIIRGNSGSGKTTIAKQLQ 23 (166)
T ss_pred CeEEEEECCCCCCHHHHHHHHH
Confidence 789999999999 44444443
No 241
>PF05436 MF_alpha_N: Mating factor alpha precursor N-terminus; InterPro: IPR008675 This entry contains the N-terminal regions of the Saccharomyces mating factor alpha precursor protein. All proteins in this family contain one or more copies of IPR006742 from INTERPRO further toward their C terminus.; GO: 0007618 mating, 0005576 extracellular region
Probab=22.87 E-value=1.5e+02 Score=23.25 Aligned_cols=15 Identities=27% Similarity=0.636 Sum_probs=10.3
Q ss_pred CCCce--eeeeecCCCC
Q 012982 31 ALPTK--SGYLPVNPAT 45 (452)
Q Consensus 31 ~~~~~--sGyl~v~~~~ 45 (452)
.+|.. -||+++....
T Consensus 32 ~iP~EAiiGyLDl~~d~ 48 (86)
T PF05436_consen 32 NIPAEAIIGYLDLGGDN 48 (86)
T ss_pred cCCHHHHhceeccCCCC
Confidence 55554 5999997643
No 242
>TIGR02052 MerP mercuric transport protein periplasmic component. This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403).
Probab=22.62 E-value=42 Score=25.20 Aligned_cols=20 Identities=25% Similarity=0.286 Sum_probs=12.0
Q ss_pred CCccchHHHHHHHHHhhcCC
Q 012982 1 MKSTTTIYFLFCFFFFLHHS 20 (452)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~ 20 (452)
||++-++.++|..+|++--+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~ 20 (92)
T TIGR02052 1 MKKLATLLALFVLTSLPAWA 20 (92)
T ss_pred ChhHHHHHHHHHHhcchhhh
Confidence 88887766555555444433
No 243
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=22.26 E-value=69 Score=27.17 Aligned_cols=15 Identities=27% Similarity=0.598 Sum_probs=13.7
Q ss_pred CCCEEEEecCCCChh
Q 012982 66 QTPLLIWLQGGPGCS 80 (452)
Q Consensus 66 ~~PlilWlnGGPG~S 80 (452)
++||+|-|+|.||+.
T Consensus 51 ~KpLVlSfHG~tGtG 65 (127)
T PF06309_consen 51 RKPLVLSFHGWTGTG 65 (127)
T ss_pred CCCEEEEeecCCCCc
Confidence 689999999999984
No 244
>PRK13733 conjugal transfer protein TraV; Provisional
Probab=21.66 E-value=81 Score=28.11 Aligned_cols=24 Identities=21% Similarity=0.268 Sum_probs=16.9
Q ss_pred CCccchHHHHHHHHHhhcCCCCCCC
Q 012982 1 MKSTTTIYFLFCFFFFLHHSPSSSS 25 (452)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~ 25 (452)
||++...++|++.| ||++-++..+
T Consensus 1 MK~~~~li~l~~~L-lL~GCAg~~s 24 (171)
T PRK13733 1 MKQISLLIPLLGTL-LLSGCAGTNS 24 (171)
T ss_pred CchhhHHHHHHHHH-HhccccCCCC
Confidence 89887777776666 6777777433
No 245
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=21.63 E-value=1.4e+02 Score=28.15 Aligned_cols=43 Identities=14% Similarity=0.134 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHH
Q 012982 145 ISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYF 188 (452)
Q Consensus 145 ~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~ 188 (452)
.+...|+.. ...|+...|+-...++.++|-|+||+.+-.+|.+
T Consensus 90 ~~~~~d~~a-~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~ 132 (236)
T COG0412 90 AEVLADIDA-ALDYLARQPQVDPKRIGVVGFCMGGGLALLAATR 132 (236)
T ss_pred HHHHHHHHH-HHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcc
Confidence 556666644 6677777777677889999999999776555533
No 246
>PRK14905 triosephosphate isomerase/PTS system glucose/sucrose-specific transporter subunit IIB; Provisional
Probab=21.39 E-value=2.1e+02 Score=28.86 Aligned_cols=60 Identities=18% Similarity=0.175 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHhh-hCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCChhh
Q 012982 146 SVAKHLFAAITGFIN-LDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDPAT 218 (452)
Q Consensus 146 ~~a~d~~~fL~~f~~-~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p~~ 218 (452)
+.++...+++++++. .+-+- ...+-|. |||---|.-+..+.... ++.|+++|.+.+++..
T Consensus 190 ~~~~~~~~~Ir~~l~~~~~~~-~~~v~IL---YGGSV~~~N~~~l~~~~---------~iDG~LVG~asl~~~~ 250 (355)
T PRK14905 190 EYADEKHAIIKQCLFELFAEE-SKKIPVL---YGGSVNLENANELIMKP---------HIDGLFIGRSAWDAQC 250 (355)
T ss_pred HHHHHHHHHHHHHHHHHhccc-cCceeEE---EeCcCCHHHHHHHhcCC---------CCCEEEechhhccHHH
Confidence 456777888888864 23212 2334444 99999999999987743 7999999999998753
No 247
>KOG1643 consensus Triosephosphate isomerase [Carbohydrate transport and metabolism]
Probab=21.35 E-value=1.5e+02 Score=27.36 Aligned_cols=83 Identities=20% Similarity=0.352 Sum_probs=51.6
Q ss_pred cCCCCcccccceeeeecC---CCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhh--CCCCCCCCEEEEeccCCccchh
Q 012982 109 PNPGSWNRIFGLLFIDNP---IGAGFSFAATNDEIPRDQISVAKHLFAAITGFINL--DPLFKNRPIYITGESYAGKYVP 183 (452)
Q Consensus 109 ~N~~SW~~~anllfiDqP---vGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~--fp~~~~~~~yl~GESYgG~yvP 183 (452)
.+-.+|.+. +|-.+ | +|||..- ..+.|+++...|+.|++. -+.-...--.|.|-|--|
T Consensus 151 d~v~~w~ni--viAYE-PVWAIGTGk~a----------tp~QaqEVh~~iR~wl~~~vs~~Va~~~RIiYGGSV~g---- 213 (247)
T KOG1643|consen 151 DKVKDWSNI--VIAYE-PVWAIGTGKTA----------TPEQAQEVHAEIRKWLKSNVSDAVASSTRIIYGGSVNG---- 213 (247)
T ss_pred HhcCCccce--EEEee-ceeeecCCCCC----------CHHHHHHHHHHHHHHHhhcchhhhhhceEEEecccccc----
Confidence 344557653 34445 4 5888761 235689999999999975 223334445665555544
Q ss_pred HHHHHHHHhcccCCCCceeecceeEecCCCCChh
Q 012982 184 AIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDPA 217 (452)
Q Consensus 184 ~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p~ 217 (452)
.-+..|.+. -.+.|+++|..-+-|.
T Consensus 214 ~N~~el~~~---------~diDGFLVGGaSLKpe 238 (247)
T KOG1643|consen 214 GNCKELAKK---------PDIDGFLVGGASLKPE 238 (247)
T ss_pred ccHHHhccc---------ccccceEEcCcccChH
Confidence 444455443 2788999998877764
No 248
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.03 E-value=1.7e+02 Score=29.51 Aligned_cols=66 Identities=9% Similarity=-0.013 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHHhcccCCCCceeecceeEecCCCCChhh
Q 012982 147 VAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDPAT 218 (452)
Q Consensus 147 ~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~~p~~ 218 (452)
...++..+|+..-+. -...++||..||+|+-.+-....++.-++.. .....++-+++-.+-+|.+.
T Consensus 173 Sr~aLe~~lr~La~~---~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~---~l~~ki~nViLAaPDiD~DV 238 (377)
T COG4782 173 SRPALERLLRYLATD---KPVKRIYLLAHSMGTWLLMEALRQLAIRADR---PLPAKIKNVILAAPDIDVDV 238 (377)
T ss_pred hHHHHHHHHHHHHhC---CCCceEEEEEecchHHHHHHHHHHHhccCCc---chhhhhhheEeeCCCCChhh
Confidence 344555544444443 2256899999999996665555555444321 12345777888778777643
No 249
>PRK10949 protease 4; Provisional
Probab=20.98 E-value=72 Score=34.75 Aligned_cols=56 Identities=23% Similarity=0.328 Sum_probs=39.1
Q ss_pred cceeeeecCCCcceeeccCCCCCCCChHHHHHHHHHHHHHHhhhCCCCCCCCEEEEeccCC--ccchhHHHHHHHHh
Q 012982 118 FGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYA--GKYVPAIGYFILKQ 192 (452)
Q Consensus 118 anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yl~GESYg--G~yvP~lA~~i~~~ 192 (452)
+=+|-+|.|.|+|.. ..+++.++|++|=+ .++|++-.|++|+ |.|+...|.+|.-+
T Consensus 115 givL~i~s~gG~~~a--------------~~~eI~~ai~~fk~-----sGKpVvA~~~~~~s~~YyLASaAD~I~l~ 172 (618)
T PRK10949 115 GIVLDLKNFAGADQP--------------SMQYIGKALREFRD-----SGKPVYAVGDSYSQGQYYLASFANKIYLS 172 (618)
T ss_pred EEEEEeCCCCCccHH--------------HHHHHHHHHHHHHH-----hCCeEEEEecCccchhhhhhhhCCEEEEC
Confidence 447778877666554 24566777777743 2679999999997 77777777776543
No 250
>TIGR03598 GTPase_YsxC ribosome biogenesis GTP-binding protein YsxC/EngB. Members of this protein family are a GTPase associated with ribosome biogenesis, typified by YsxC from Bacillus subutilis. The family is widely but not universally distributed among bacteria. Members commonly are called EngB based on homology to EngA, one of several other GTPases of ribosome biogenesis. Cutoffs as set find essentially all bacterial members, but also identify large numbers of eukaryotic (probably organellar) sequences. This protein is found in about 80 percent of bacterial genomes.
Probab=20.73 E-value=3.4e+02 Score=23.68 Aligned_cols=26 Identities=15% Similarity=0.093 Sum_probs=18.8
Q ss_pred CCCCCCEEEEecCCCCh--hhhhhhhhc
Q 012982 63 SLSQTPLLIWLQGGPGC--SSMTGNFLE 88 (452)
Q Consensus 63 ~~~~~PlilWlnGGPG~--SS~~g~f~e 88 (452)
.|+++..-+-+-|-||+ ||+.-.+..
T Consensus 13 ~~~~~~~~i~ivG~~~~GKStlin~l~~ 40 (179)
T TIGR03598 13 LPPDDGPEIAFAGRSNVGKSSLINALTN 40 (179)
T ss_pred CCCCCCCEEEEEcCCCCCHHHHHHHHhC
Confidence 46677778888888877 787766544
No 251
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=20.68 E-value=3.8e+02 Score=28.41 Aligned_cols=58 Identities=17% Similarity=0.190 Sum_probs=28.5
Q ss_pred ceeeccCCCCCCCChHHHHHHH-HHHHHHHhhhCCCCCCCCEEEEeccCCccchhHHHHHHHH
Q 012982 130 GFSFAATNDEIPRDQISVAKHL-FAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILK 191 (452)
Q Consensus 130 GfSy~~~~~~~~~~~~~~a~d~-~~fL~~f~~~fp~~~~~~~yl~GESYgG~yvP~lA~~i~~ 191 (452)
||=|-....+.|.|.--.-+++ .+.+++=+..|- =....+=|+|||-|.. .+..+++.
T Consensus 180 GFL~l~~~~eaPGNmGl~DQqLAl~WV~~Ni~aFG-Gnp~~vTLFGESAGaA---Sv~aHLls 238 (601)
T KOG4389|consen 180 GFLYLPGHPEAPGNMGLLDQQLALQWVQENIAAFG-GNPSRVTLFGESAGAA---SVVAHLLS 238 (601)
T ss_pred eEEecCCCCCCCCccchHHHHHHHHHHHHhHHHhC-CCcceEEEeccccchh---hhhheecC
Confidence 5665533334555532222222 133444444331 1245799999999973 34444443
No 252
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=20.46 E-value=53 Score=26.35 Aligned_cols=15 Identities=13% Similarity=0.066 Sum_probs=8.1
Q ss_pred CCccchHHHHHHHHH
Q 012982 1 MKSTTTIYFLFCFFF 15 (452)
Q Consensus 1 ~~~~~~~~~~~~~~~ 15 (452)
|.|.+.++|+|||-.
T Consensus 1 MaSK~~llL~l~LA~ 15 (95)
T PF07172_consen 1 MASKAFLLLGLLLAA 15 (95)
T ss_pred CchhHHHHHHHHHHH
Confidence 666665555554433
No 253
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=20.28 E-value=1.4e+02 Score=32.54 Aligned_cols=58 Identities=17% Similarity=0.139 Sum_probs=40.2
Q ss_pred eEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccCCCCCHHHHHH
Q 012982 346 KVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQPLNSQIM 425 (452)
Q Consensus 346 rVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp~dqP~~~~~~ 425 (452)
.+|+..|-.|..|++---.+|+.+|+--..+ ...|-+-+=-.|||--...+.+...+.
T Consensus 611 ~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td----------------------~~plLlkt~M~aGHgG~SgRf~~lee~ 668 (682)
T COG1770 611 AILVTTGLNDPRVQYWEPAKWVAKLRELKTD----------------------GNPLLLKTNMDAGHGGASGRFQRLEEI 668 (682)
T ss_pred ceEEEccccCCccccchHHHHHHHHhhcccC----------------------CCcEEEEecccccCCCCCCchHHHHHH
Confidence 6778899999999999999999888532221 112445555899997666666554443
No 254
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=20.12 E-value=88 Score=28.12 Aligned_cols=44 Identities=18% Similarity=0.222 Sum_probs=32.5
Q ss_pred eeEEEEeccCCccCChhhHHHHHhhcccccchhhhhccCceeEeCCEEeeEEEeeCcEEEEEEcCCccccC
Q 012982 345 TKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVP 415 (452)
Q Consensus 345 irVliy~Gd~D~i~n~~g~~~~i~~l~w~g~~~f~~a~~~~w~~~g~~~G~~k~~~~ltf~~V~~AGHmvp 415 (452)
-+++|++|+.|..++ .++.+.++|+-.|. ..++..+.+++|...
T Consensus 167 Pp~~i~~g~~D~l~~--~~~~~~~~L~~~gv-------------------------~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 167 PPTLIIHGEDDVLVD--DSLRFAEKLKKAGV-------------------------DVELHVYPGMPHGFF 210 (211)
T ss_dssp HEEEEEEETTSTTHH--HHHHHHHHHHHTT--------------------------EEEEEEETTEETTGG
T ss_pred CCeeeeccccccchH--HHHHHHHHHHHCCC-------------------------CEEEEEECCCeEEee
Confidence 499999999998764 56778888763222 235888999999754
No 255
>PF15632 ATPgrasp_Ter: ATP-grasp in the biosynthetic pathway with Ter operon
Probab=20.02 E-value=2.6e+02 Score=27.89 Aligned_cols=70 Identities=11% Similarity=0.251 Sum_probs=46.1
Q ss_pred EEec-CCCChhhhhhhhhcccCeEEccCCcccccccccccCC-CCcccccceeeeecCCCcceeeccCCCCCCCChHHHH
Q 012982 71 IWLQ-GGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNP-GSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQISVA 148 (452)
Q Consensus 71 lWln-GGPG~SS~~g~f~e~GP~~i~~~~~~~~~~~~l~~N~-~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a 148 (452)
|||| |+|+...++..+..+++++|-... .++ ..-...++-.|++ |. ..
T Consensus 2 iwfn~~~s~~~~~i~~lr~~~~~~i~~sh----------~~~~~~~~~~aD~~~~e-P~-------------------~~ 51 (329)
T PF15632_consen 2 IWFNRGFSSQRDIIRSLRANRDFTIIASH----------RDPRAPILYAADEAYLE-PA-------------------DG 51 (329)
T ss_pred EEecCCCccHHHHHHHHHcCCCeEEEEEe----------CCCCchHHhcCceeeec-CC-------------------CH
Confidence 7998 678888888888888999886322 121 1234455555555 42 13
Q ss_pred HHHHHHHHHHhhhCCCCCCCCEEEEe
Q 012982 149 KHLFAAITGFINLDPLFKNRPIYITG 174 (452)
Q Consensus 149 ~d~~~fL~~f~~~fp~~~~~~~yl~G 174 (452)
++..+++.+|.+++ +-++++.|
T Consensus 52 ~~yv~~~l~~C~~~----~Idv~~P~ 73 (329)
T PF15632_consen 52 EEYVDWCLDFCKEH----GIDVFVPG 73 (329)
T ss_pred HHHHHHHHHHHHHh----CCeEEEcC
Confidence 45678899999876 56788865
Done!