Citrus Sinensis ID: 012982

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450--
MKSTTTIYFLFCFFFFLHHSPSSSSLLPKEALPTKSGYLPVNPATGSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDPATQVATHALNAYFSGLINERQKDELEKAQGEAIRLVKMGNWSEATNARNELLDLLQDMTGLATLYDFSKKVPYPTELVTRLLRIDEVKKALGAKETIVFEDCSDVVGEALHADEMKSVKFMVEFLVRNTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQPLNSQIMIEDWVLDKGLFAANHHKKPPPSSFRLL
cccHHHHHHHHHHHHHHcccccccccccccccccccEEEEccccccccEEEEEEECccccccccccccEEEEccccccHHHHHHHHHHccccEEEccccccccccccccccccccccccEEEECccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccEEEEcccccccHHHHHHHHHHHHcccccccccEEEEEEEEcccccccHHHHccHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHccHHHHHHHHccccccccccccHHHHHHHcccccccHHHHHHHHHccccEEEEccccccccccHHHHHHHHHccccccccccccccEEEEEccEEEEEEEEEccEEEEEEcccccccccccHHHHHHHHHHHHcccccccccccccccccccccc
**STTTIYFLFCFFFFLHHSPSSSSLLPKEALPTKSGYLPVNPATGSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDPATQVATHALNAYFSGLINERQKDELEKAQGEAIRLVKMGNWSEATNARNELLDLLQDMTGLATLYDFSKKVPYPTELVTRLLRIDEVKKALGAKETIVFEDCSDVVGEALHADEMKSVKFMVEFLVRNTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQPLNSQIMIEDWVLDK*******************
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SSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MKSTTTIYFLFCFFFFLHHSPSSSSLLPKEALPTKSGYLPVNPATGSAIFYAYYEAQTPITSSLSQTPLLIWLQGGPGCSSMTGNFLELGPWRVTLSQRQNAEQLSLKPNPGSWNRIFGLLFIDNPIGAGFSFAATNDEIPRDQISVAKHLFAAITGFINLDPLFKNRPIYITGESYAGKYVPAIGYFILKQNKQLPSSKRVNLQGVAIGNGLTDPATQVATHALNAYFSGLIxxxxxxxxxxxxxxxxxxxxxGNWSEATNARNELLDLLQDMTGLATLYDFSKKVPYPTELVTRLLRIDEVKKALGAKETIVFEDCSDVVGEALHADEMKSVKFMVEFLVRNTKVLLYQGHFDLRDGVVSTEAWVKTMKWEGIESFLMAERKVWKVKEELAGYVQKWGNLSHVVVLGAGHLVPTDQPLNSQIMIEDWVLDKGLFAANHHKKPPPSSFRLL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Serine carboxypeptidase-like 50 Probable carboxypeptidase.probableQ9M9Q6
Serine carboxypeptidase S10 family member 1 Probable carboxypeptidase.probableQ54DY7
Probable serine carboxypeptidase CPVL May be involved in the digestion of phagocytosed particles in the lysosome, participation in an inflammatory protease cascade, and trimming of peptides for antigen presentation.probableQ9H3G5

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1IVY, chain A
Confidence level:very confident
Coverage over the Query: 20-435
View the alignment between query and template
View the model in PyMOL
Template: 1AC5, chain A
Confidence level:very confident
Coverage over the Query: 31-438
View the alignment between query and template
View the model in PyMOL