Query 012984
Match_columns 452
No_of_seqs 208 out of 807
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 20:01:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012984.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012984hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qhp_A Type 1 capsular polysac 96.8 0.0011 3.8E-08 57.7 4.8 96 312-418 65-162 (166)
2 2bfw_A GLGA glycogen synthase; 94.7 0.019 6.6E-07 51.1 3.7 89 312-412 106-197 (200)
3 3c48_A Predicted glycosyltrans 94.7 0.027 9.2E-07 56.5 5.1 93 313-416 317-411 (438)
4 2gek_A Phosphatidylinositol ma 93.7 0.014 4.9E-07 57.7 0.6 93 313-417 274-370 (406)
5 3okp_A GDP-mannose-dependent a 93.6 0.18 6E-06 49.3 8.3 92 313-416 264-365 (394)
6 2jjm_A Glycosyl transferase, g 93.5 0.12 4.2E-06 51.0 7.1 94 312-418 275-373 (394)
7 1f0k_A MURG, UDP-N-acetylgluco 92.3 0.084 2.9E-06 51.4 3.9 82 313-412 246-339 (364)
8 2iw1_A Lipopolysaccharide core 92.2 0.084 2.9E-06 51.4 3.7 92 312-416 261-357 (374)
9 2nzw_A Alpha1,3-fucosyltransfe 91.3 0.66 2.3E-05 46.7 9.1 126 248-403 177-307 (371)
10 3oy2_A Glycosyltransferase B73 90.3 0.071 2.4E-06 53.0 0.9 95 313-418 265-378 (413)
11 3rhz_A GTF3, nucleotide sugar 89.7 0.21 7.1E-06 49.7 3.8 92 312-418 224-324 (339)
12 2f9f_A First mannosyl transfer 89.2 0.067 2.3E-06 47.2 -0.2 43 312-355 88-130 (177)
13 2r60_A Glycosyl transferase, g 89.1 0.23 7.9E-06 50.9 3.8 96 312-418 345-447 (499)
14 1rzu_A Glycogen synthase 1; gl 88.3 1.5 5.3E-05 44.3 9.3 85 314-408 358-455 (485)
15 3fro_A GLGA glycogen synthase; 86.7 0.16 5.4E-06 50.4 0.7 93 312-416 321-416 (439)
16 2x6q_A Trehalose-synthase TRET 84.3 0.38 1.3E-05 47.8 2.1 90 314-416 308-400 (416)
17 2qzs_A Glycogen synthase; glyc 83.3 0.61 2.1E-05 47.4 3.2 86 314-409 359-457 (485)
18 2x0d_A WSAF; GT4 family, trans 76.1 0.95 3.3E-05 45.8 1.9 94 312-419 305-399 (413)
19 3s28_A Sucrose synthase 1; gly 74.0 2.9 9.8E-05 46.4 5.2 94 314-418 656-757 (816)
20 3nb0_A Glycogen [starch] synth 67.3 4.4 0.00015 44.1 4.6 104 313-420 510-623 (725)
21 1vgv_A UDP-N-acetylglucosamine 66.9 0.66 2.3E-05 45.3 -1.8 75 313-406 274-352 (384)
22 2iuy_A Avigt4, glycosyltransfe 66.4 2.2 7.6E-05 40.8 1.9 73 313-397 223-307 (342)
23 2vsy_A XCC0866; transferase, g 62.4 2.5 8.6E-05 43.7 1.5 37 313-351 445-481 (568)
24 2o6l_A UDP-glucuronosyltransfe 60.8 26 0.0009 29.6 7.8 87 316-413 79-167 (170)
25 1uqt_A Alpha, alpha-trehalose- 58.1 5.2 0.00018 41.4 3.0 92 312-414 342-438 (482)
26 3beo_A UDP-N-acetylglucosamine 57.9 1.4 4.9E-05 42.6 -1.3 36 313-354 274-309 (375)
27 3s2u_A UDP-N-acetylglucosamine 46.9 22 0.00076 34.7 5.5 87 314-410 245-338 (365)
28 3vue_A GBSS-I, granule-bound s 46.4 18 0.00061 37.7 4.9 102 313-419 393-500 (536)
29 3dzc_A UDP-N-acetylglucosamine 28.1 16 0.00055 36.3 0.8 36 313-354 299-334 (396)
30 1iir_A Glycosyltransferase GTF 25.0 29 0.001 34.1 2.1 66 316-395 296-366 (415)
31 4fzr_A SSFS6; structural genom 24.6 52 0.0018 31.9 3.9 83 314-410 293-382 (398)
32 2xci_A KDO-transferase, 3-deox 24.2 42 0.0014 32.8 3.1 41 313-354 269-310 (374)
33 3otg_A CALG1; calicheamicin, T 23.1 37 0.0013 32.9 2.5 84 314-411 301-391 (412)
34 3ot5_A UDP-N-acetylglucosamine 23.1 31 0.0011 34.3 1.9 98 313-445 293-394 (403)
35 2iyf_A OLED, oleandomycin glyc 22.1 39 0.0013 33.1 2.4 85 317-410 295-381 (430)
36 3ia7_A CALG4; glycosysltransfe 21.9 67 0.0023 30.8 4.0 79 316-408 292-378 (402)
37 2hy7_A Glucuronosyltransferase 21.0 42 0.0014 33.1 2.3 41 313-354 276-323 (406)
No 1
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=96.78 E-value=0.0011 Score=57.68 Aligned_cols=96 Identities=6% Similarity=0.108 Sum_probs=62.9
Q ss_pred cchhhcccccceEEecCCCCCCCCchHHHHHhhCceeEEeecCcccccccccCCCCCCCceEEEeecCccccccccHHHH
Q 012984 312 PIRFMRPMLRATFCLQPPGDTPTRRSTFDGFLAGCIPVFFEEQSAKSQYVWHLPGEMYDEFSVFIPKEDVVFKGLKIVDV 391 (452)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~ssrrl~DAi~~GCIPVii~d~~~~~qy~w~LPfD~w~~fsV~I~e~dv~~~~~~l~~i 391 (452)
..+..+.|+.+..++.|.-.......+.|||++||||||..+..... -++--+ ... .++..+.. .+.+.
T Consensus 65 ~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~---~~~~~~--~~~--~~~~~~~~----~l~~~ 133 (166)
T 3qhp_A 65 SNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSAT---RQFALD--ERS--LFEPNNAK----DLSAK 133 (166)
T ss_dssp HHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGG---GGGCSS--GGG--EECTTCHH----HHHHH
T ss_pred HHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCch---hhhccC--Cce--EEcCCCHH----HHHHH
Confidence 46788999999999998754444556999999999999995432100 012112 222 55666665 44444
Q ss_pred HcCC--CHHHHHHHHHHHHhhcceeeEec
Q 012984 392 LMSI--PNAKVRRMRERVIELMPGVIYRR 418 (452)
Q Consensus 392 L~~I--~~~~i~~Mq~~l~~v~~~f~Y~~ 418 (452)
|..+ .++...+|.++.++...+|.|..
T Consensus 134 i~~l~~~~~~~~~~~~~~~~~~~~~s~~~ 162 (166)
T 3qhp_A 134 IDWWLENKLERERMQNEYAKSALNYTLEN 162 (166)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHCChhh
Confidence 4433 67888999999888777777754
No 2
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=94.69 E-value=0.019 Score=51.12 Aligned_cols=89 Identities=9% Similarity=0.112 Sum_probs=60.3
Q ss_pred cchhhcccccceEEecCCCCCCCCchHHHHHhhCceeEEeecCcccccccccCCCCCCCceEEEeecCccccccccHHHH
Q 012984 312 PIRFMRPMLRATFCLQPPGDTPTRRSTFDGFLAGCIPVFFEEQSAKSQYVWHLPGEMYDEFSVFIPKEDVVFKGLKIVDV 391 (452)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~ssrrl~DAi~~GCIPVii~d~~~~~qy~w~LPfD~w~~fsV~I~e~dv~~~~~~l~~i 391 (452)
..++.+.|+.+.+++.|.-.......++|||++|| |||.++..... ++- + ....+.++..+.. .+.+.
T Consensus 106 ~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~-PvI~~~~~~~~----e~~-~--~~~g~~~~~~~~~----~l~~~ 173 (200)
T 2bfw_A 106 REFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA-IPIASAVGGLR----DII-T--NETGILVKAGDPG----ELANA 173 (200)
T ss_dssp HHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTC-EEEEESCHHHH----HHC-C--TTTCEEECTTCHH----HHHHH
T ss_pred HHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCC-CEEEeCCCChH----HHc-C--CCceEEecCCCHH----HHHHH
Confidence 45788999999999999865545566999999998 68887753211 111 3 2334566666655 55555
Q ss_pred HcCC---CHHHHHHHHHHHHhhcc
Q 012984 392 LMSI---PNAKVRRMRERVIELMP 412 (452)
Q Consensus 392 L~~I---~~~~i~~Mq~~l~~v~~ 412 (452)
|..+ .++++.+|.++.++...
T Consensus 174 i~~l~~~~~~~~~~~~~~a~~~~~ 197 (200)
T 2bfw_A 174 ILKALELSRSDLSKFRENCKKRAM 197 (200)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHH
Confidence 5443 67888999988876544
No 3
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=94.69 E-value=0.027 Score=56.52 Aligned_cols=93 Identities=13% Similarity=0.114 Sum_probs=62.9
Q ss_pred chhhcccccceEEecCCCCCCCCchHHHHHhhCceeEEeecCcccccccccCCCCCCCceEEEeecCccccccccHHHHH
Q 012984 313 IRFMRPMLRATFCLQPPGDTPTRRSTFDGFLAGCIPVFFEEQSAKSQYVWHLPGEMYDEFSVFIPKEDVVFKGLKIVDVL 392 (452)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~ssrrl~DAi~~GCIPVii~d~~~~~qy~w~LPfD~w~~fsV~I~e~dv~~~~~~l~~iL 392 (452)
.+..+.|+.+.+++.|.-.......++|||++|| |||.++..... ++ .. -....+.++..|.. .|.+.|
T Consensus 317 ~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~~~~----e~-i~-~~~~g~~~~~~d~~----~la~~i 385 (438)
T 3c48_A 317 SELVAVYRAADIVAVPSFNESFGLVAMEAQASGT-PVIAARVGGLP----IA-VA-EGETGLLVDGHSPH----AWADAL 385 (438)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTC-CEEEESCTTHH----HH-SC-BTTTEEEESSCCHH----HHHHHH
T ss_pred HHHHHHHHhCCEEEECccccCCchHHHHHHHcCC-CEEecCCCChh----HH-hh-CCCcEEECCCCCHH----HHHHHH
Confidence 5678899999999999865545566999999999 88888753110 11 11 13346677766666 555554
Q ss_pred cCC--CHHHHHHHHHHHHhhcceeeE
Q 012984 393 MSI--PNAKVRRMRERVIELMPGVIY 416 (452)
Q Consensus 393 ~~I--~~~~i~~Mq~~l~~v~~~f~Y 416 (452)
..+ .++...+|.++.++....|.|
T Consensus 386 ~~l~~~~~~~~~~~~~~~~~~~~~s~ 411 (438)
T 3c48_A 386 ATLLDDDETRIRMGEDAVEHARTFSW 411 (438)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCHHHHHHHHHHHHHHHHhCCH
Confidence 443 577788898888776655555
No 4
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=93.70 E-value=0.014 Score=57.66 Aligned_cols=93 Identities=15% Similarity=0.144 Sum_probs=62.5
Q ss_pred chhhcccccceEEecCC--CCCCCCchHHHHHhhCceeEEeecCcccccccccCCCCCCCceEEEeecCccccccccHHH
Q 012984 313 IRFMRPMLRATFCLQPP--GDTPTRRSTFDGFLAGCIPVFFEEQSAKSQYVWHLPGEMYDEFSVFIPKEDVVFKGLKIVD 390 (452)
Q Consensus 313 ~~y~~~m~~S~FCL~P~--Gd~~ssrrl~DAi~~GCIPVii~d~~~~~qy~w~LPfD~w~~fsV~I~e~dv~~~~~~l~~ 390 (452)
.++.+.|+.+.+++.|. +.+.+ ..++|||++|| |||.++..... ++- + -....+.++..+.. .+.+
T Consensus 274 ~~~~~~~~~adv~v~ps~~~e~~~-~~~~Ea~a~G~-PvI~~~~~~~~----e~i-~-~~~~g~~~~~~d~~----~l~~ 341 (406)
T 2gek_A 274 ATKASAMRSADVYCAPHLGGESFG-IVLVEAMAAGT-AVVASDLDAFR----RVL-A-DGDAGRLVPVDDAD----GMAA 341 (406)
T ss_dssp HHHHHHHHHSSEEEECCCSCCSSC-HHHHHHHHHTC-EEEECCCHHHH----HHH-T-TTTSSEECCTTCHH----HHHH
T ss_pred HHHHHHHHHCCEEEecCCCCCCCc-hHHHHHHHcCC-CEEEecCCcHH----HHh-c-CCCceEEeCCCCHH----HHHH
Confidence 45689999999999995 44554 45999999998 88888763111 111 1 12345566666666 5555
Q ss_pred HHcCC--CHHHHHHHHHHHHhhcceeeEe
Q 012984 391 VLMSI--PNAKVRRMRERVIELMPGVIYR 417 (452)
Q Consensus 391 iL~~I--~~~~i~~Mq~~l~~v~~~f~Y~ 417 (452)
.|..+ .++...+|.++.++....|.|.
T Consensus 342 ~i~~l~~~~~~~~~~~~~~~~~~~~~s~~ 370 (406)
T 2gek_A 342 ALIGILEDDQLRAGYVARASERVHRYDWS 370 (406)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHGGGGBHH
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHhCCHH
Confidence 55444 5778889988888776666553
No 5
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=93.58 E-value=0.18 Score=49.34 Aligned_cols=92 Identities=11% Similarity=0.126 Sum_probs=62.9
Q ss_pred chhhcccccceEEecCCCC-------CCCCchHHHHHhhCceeEEeecCcccccccccCCCCCCCceEEEeecCcccccc
Q 012984 313 IRFMRPMLRATFCLQPPGD-------TPTRRSTFDGFLAGCIPVFFEEQSAKSQYVWHLPGEMYDEFSVFIPKEDVVFKG 385 (452)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd-------~~ssrrl~DAi~~GCIPVii~d~~~~~qy~w~LPfD~w~~fsV~I~e~dv~~~~ 385 (452)
.+..+.|+.+.+++.|.-. ......++|||++|| |||.++..... ++--+ . ..+.++..+..
T Consensus 264 ~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~-PvI~~~~~~~~----e~i~~--~-~g~~~~~~d~~--- 332 (394)
T 3okp_A 264 QDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGV-PVIAGTSGGAP----ETVTP--A-TGLVVEGSDVD--- 332 (394)
T ss_dssp HHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTC-CEEECSSTTGG----GGCCT--T-TEEECCTTCHH---
T ss_pred HHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCC-CEEEeCCCChH----HHHhc--C-CceEeCCCCHH---
Confidence 6778899999999999765 444556999999995 88888753110 11112 2 56777777766
Q ss_pred ccHHHHHcCC--CHHHHHHHHHHHHhhc-ceeeE
Q 012984 386 LKIVDVLMSI--PNAKVRRMRERVIELM-PGVIY 416 (452)
Q Consensus 386 ~~l~~iL~~I--~~~~i~~Mq~~l~~v~-~~f~Y 416 (452)
.+.+.|..+ .++...+|.++.++.. .+|.|
T Consensus 333 -~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~ 365 (394)
T 3okp_A 333 -KLSELLIELLDDPIRRAAMGAAGRAHVEAEWSW 365 (394)
T ss_dssp -HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTBH
T ss_pred -HHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCH
Confidence 555555443 6788889988877644 44655
No 6
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=93.53 E-value=0.12 Score=51.02 Aligned_cols=94 Identities=12% Similarity=0.125 Sum_probs=64.0
Q ss_pred cchhhcccccceEEecCCCCCCCCchHHHHHhhCceeEEeecCcccccccccCCC--CCCCceEEEeecCccccccccHH
Q 012984 312 PIRFMRPMLRATFCLQPPGDTPTRRSTFDGFLAGCIPVFFEEQSAKSQYVWHLPG--EMYDEFSVFIPKEDVVFKGLKIV 389 (452)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~ssrrl~DAi~~GCIPVii~d~~~~~qy~w~LPf--D~w~~fsV~I~e~dv~~~~~~l~ 389 (452)
..+..+.|+.+.+++.|.-.......++|||++|| |||.++.. ..+- + -....+.++..|.. .+.
T Consensus 275 ~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~-PvI~~~~~-------~~~e~v~-~~~~g~~~~~~d~~----~la 341 (394)
T 2jjm_A 275 QDNVAELLAMSDLMLLLSEKESFGLVLLEAMACGV-PCIGTRVG-------GIPEVIQ-HGDTGYLCEVGDTT----GVA 341 (394)
T ss_dssp CSCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTTC-CEEEECCT-------TSTTTCC-BTTTEEEECTTCHH----HHH
T ss_pred hhhHHHHHHhCCEEEeccccCCCchHHHHHHhcCC-CEEEecCC-------ChHHHhh-cCCceEEeCCCCHH----HHH
Confidence 35677899999999998755444556999999995 88888753 1222 2 13456777777766 555
Q ss_pred HHHcCC--CHHHHHHHHHHHHhhc-ceeeEec
Q 012984 390 DVLMSI--PNAKVRRMRERVIELM-PGVIYRR 418 (452)
Q Consensus 390 ~iL~~I--~~~~i~~Mq~~l~~v~-~~f~Y~~ 418 (452)
+.|..+ .++...+|.++.++.. ..|.|..
T Consensus 342 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~ 373 (394)
T 2jjm_A 342 DQAIQLLKDEELHRNMGERARESVYEQFRSEK 373 (394)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHSCHHH
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 555443 5777888988887755 6666633
No 7
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=92.33 E-value=0.084 Score=51.45 Aligned_cols=82 Identities=16% Similarity=0.119 Sum_probs=60.3
Q ss_pred chhhcccccceEEecCCCCCCCCchHHHHHhhCceeEEeecCcccccccccCC--------C--CCCCceEEEeecCc--
Q 012984 313 IRFMRPMLRATFCLQPPGDTPTRRSTFDGFLAGCIPVFFEEQSAKSQYVWHLP--------G--EMYDEFSVFIPKED-- 380 (452)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~ssrrl~DAi~~GCIPVii~d~~~~~qy~w~LP--------f--D~w~~fsV~I~e~d-- 380 (452)
.+..+.|+.+..++.|.| ...+.|||++|+ |||..+.. ..| . + ....+.++..|
T Consensus 246 ~~~~~~~~~ad~~v~~sg----~~~~~EAma~G~-Pvi~~~~~-------g~~~~q~~~~~~~~~--~g~g~~~~~~d~~ 311 (364)
T 1f0k_A 246 DDMAAAYAWADVVVCRSG----ALTVSEIAAAGL-PALFVPFQ-------HKDRQQYWNALPLEK--AGAAKIIEQPQLS 311 (364)
T ss_dssp SCHHHHHHHCSEEEECCC----HHHHHHHHHHTC-CEEECCCC-------CTTCHHHHHHHHHHH--TTSEEECCGGGCC
T ss_pred hhHHHHHHhCCEEEECCc----hHHHHHHHHhCC-CEEEeeCC-------CCchhHHHHHHHHHh--CCcEEEeccccCC
Confidence 456788999999999987 455899999997 88888753 112 1 2 12377888777
Q ss_pred cccccccHHHHHcCCCHHHHHHHHHHHHhhcc
Q 012984 381 VVFKGLKIVDVLMSIPNAKVRRMRERVIELMP 412 (452)
Q Consensus 381 v~~~~~~l~~iL~~I~~~~i~~Mq~~l~~v~~ 412 (452)
.. .|.+.|..+.++...+|.++.++...
T Consensus 312 ~~----~la~~i~~l~~~~~~~~~~~~~~~~~ 339 (364)
T 1f0k_A 312 VD----AVANTLAGWSRETLLTMAERARAASI 339 (364)
T ss_dssp HH----HHHHHHHTCCHHHHHHHHHHHHHTCC
T ss_pred HH----HHHHHHHhcCHHHHHHHHHHHHHhhc
Confidence 56 78888887777778888888876554
No 8
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=92.18 E-value=0.084 Score=51.36 Aligned_cols=92 Identities=13% Similarity=0.053 Sum_probs=62.5
Q ss_pred cchhhcccccceEEecCCCCCCCCchHHHHHhhCceeEEeecCcccccccccCCC--CCCCceEEEee-cCccccccccH
Q 012984 312 PIRFMRPMLRATFCLQPPGDTPTRRSTFDGFLAGCIPVFFEEQSAKSQYVWHLPG--EMYDEFSVFIP-KEDVVFKGLKI 388 (452)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~ssrrl~DAi~~GCIPVii~d~~~~~qy~w~LPf--D~w~~fsV~I~-e~dv~~~~~~l 388 (452)
..+..+.|+.+.+++.|.-.......++|||++|+ |||.++.. ..+- . -....+.++ ..+.. .+
T Consensus 261 ~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~-Pvi~~~~~-------~~~e~i~-~~~~g~~~~~~~~~~----~l 327 (374)
T 2iw1_A 261 RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGL-PVLTTAVC-------GYAHYIA-DANCGTVIAEPFSQE----QL 327 (374)
T ss_dssp CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTC-CEEEETTS-------TTTHHHH-HHTCEEEECSSCCHH----HH
T ss_pred cccHHHHHHhcCEEEeccccCCcccHHHHHHHCCC-CEEEecCC-------Cchhhhc-cCCceEEeCCCCCHH----HH
Confidence 34678899999999998755444566999999999 89988853 1111 1 124566676 55655 45
Q ss_pred HHHHcCC--CHHHHHHHHHHHHhhcceeeE
Q 012984 389 VDVLMSI--PNAKVRRMRERVIELMPGVIY 416 (452)
Q Consensus 389 ~~iL~~I--~~~~i~~Mq~~l~~v~~~f~Y 416 (452)
.+.|..+ .++...+|.++.++....+.|
T Consensus 328 ~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~ 357 (374)
T 2iw1_A 328 NEVLRKALTQSPLRMAWAENARHYADTQDL 357 (374)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHcChHHHHHHHHHHHHHHHHhhH
Confidence 4444433 678889999998877665544
No 9
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A*
Probab=91.29 E-value=0.66 Score=46.71 Aligned_cols=126 Identities=13% Similarity=0.145 Sum_probs=71.5
Q ss_pred CCCceEEEEecCCCCCCCchHHHHHHHHHhhcCCCchhhhcCCCCcccceeEEeccCCCcccCCcchhhcccccceEEec
Q 012984 248 SRRSTLMLFAGGGGVGANPNIRRSIRNECKSNHSSEVVAAAGGGGHFNKVCDIVDCSNGICEHDPIRFMRPMLRATFCLQ 327 (452)
Q Consensus 248 ~~R~~L~~F~G~~~~~~~~~iR~~L~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~y~~~m~~S~FCL~ 327 (452)
..++-++.+.-+-+. ...|..+++.+. + .-.+ -..-.|.+..| .......+.+++-||.|+
T Consensus 177 ~~K~k~v~wvvSnc~---~~~R~~~~~~L~-k-~i~V-------------d~~G~c~~~~~-~~~~~~~~~l~~YKFyLa 237 (371)
T 2nzw_A 177 PLKRGFASFVASNPN---APIRNAFYDALN-S-IEPV-------------TGGGSVRNTLG-YNVKNKNEFLSQYKFNLC 237 (371)
T ss_dssp TTSSEEEEECCSCCC---CHHHHHHHHHHT-T-TSCC-------------EECSSTTCCSS-SCCSCHHHHHTTEEEEEE
T ss_pred CCCceEEEEEEeCCC---cHHHHHHHHHHh-C-cCCE-------------eeCCCccCCCC-CccccHHHHHhcCcEEEE
Confidence 345555555543332 257999999888 5 2211 01111211111 122456778899999997
Q ss_pred CC---CCCCCCchHHHHHhhCceeEEeecCcccccccccCCCCCCCceEEEeecCccccccccHHHHHcCCC--HHHHHH
Q 012984 328 PP---GDTPTRRSTFDGFLAGCIPVFFEEQSAKSQYVWHLPGEMYDEFSVFIPKEDVVFKGLKIVDVLMSIP--NAKVRR 402 (452)
Q Consensus 328 P~---Gd~~ssrrl~DAi~~GCIPVii~d~~~~~qy~w~LPfD~w~~fsV~I~e~dv~~~~~~l~~iL~~I~--~~~i~~ 402 (452)
.- -...-+--||+|+.+|||||+++... +.+ .+|-+ + +|..+|..+.. .|.+.|+.+. ++.+.+
T Consensus 238 fENs~c~dYvTEK~~~al~~g~VPI~~G~~~-~~~---~~Pp~---S---fI~~~dF~s~~-~La~yL~~L~~n~~~Y~~ 306 (371)
T 2nzw_A 238 FENTQGYGYVTEKIIDAYFSHTIPIYWGSPS-VAK---DFNPK---S---FVNVHDFKNFD-EAIDYIKYLHTHKNAYLD 306 (371)
T ss_dssp ECSSCCTTCCCTHHHHHHHTTCEEEEESCTT-GGG---TSCGG---G---SEEGGGSSSHH-HHHHHHHHHHTCHHHHHH
T ss_pred EeccCCCCcccHHHHHHHhCCeEEEEECCCc-hhh---hCCCC---c---eEEcccCCCHH-HHHHHHHHHhcCHHHHHH
Confidence 43 34455566999999999999999763 111 23432 2 34555555444 6777776554 444544
Q ss_pred H
Q 012984 403 M 403 (452)
Q Consensus 403 M 403 (452)
+
T Consensus 307 y 307 (371)
T 2nzw_A 307 M 307 (371)
T ss_dssp H
T ss_pred H
Confidence 3
No 10
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=90.28 E-value=0.071 Score=53.04 Aligned_cols=95 Identities=9% Similarity=0.067 Sum_probs=60.1
Q ss_pred chhhcccccceEEecCCCCCCCCchHHHHHhhCceeEEeecCcccccccccCCCCCCCc--------------eEE--Ee
Q 012984 313 IRFMRPMLRATFCLQPPGDTPTRRSTFDGFLAGCIPVFFEEQSAKSQYVWHLPGEMYDE--------------FSV--FI 376 (452)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~ssrrl~DAi~~GCIPVii~d~~~~~qy~w~LPfD~w~~--------------fsV--~I 376 (452)
.+..+.|+.+..++.|.-.......+.|||++|| |||.++..... ++--+ -.. ..+ .+
T Consensus 265 ~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~-PvI~s~~~g~~----e~v~~-~~~~~i~~~~~~~~~~~~G~~gl~ 338 (413)
T 3oy2_A 265 ERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGK-PLIISAVGGAD----DYFSG-DCVYKIKPSAWISVDDRDGIGGIE 338 (413)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTC-CEEEECCHHHH----HHSCT-TTSEEECCCEEEECTTTCSSCCEE
T ss_pred HHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCC-CEEEcCCCChH----HHHcc-CcccccccccccccccccCcceee
Confidence 4677889999999998754444456999999997 89988763210 11101 111 133 45
Q ss_pred ecCccccccccHHHHHcCC--CHHHHHHHHHHHHhhc-ceeeEec
Q 012984 377 PKEDVVFKGLKIVDVLMSI--PNAKVRRMRERVIELM-PGVIYRR 418 (452)
Q Consensus 377 ~e~dv~~~~~~l~~iL~~I--~~~~i~~Mq~~l~~v~-~~f~Y~~ 418 (452)
+..+.. .|.+.| .+ .++...+|.++.++.. .+|.|..
T Consensus 339 ~~~d~~----~la~~i-~l~~~~~~~~~~~~~a~~~~~~~fs~~~ 378 (413)
T 3oy2_A 339 GIIDVD----DLVEAF-TFFKDEKNRKEYGKRVQDFVKTKPTWDD 378 (413)
T ss_dssp EECCHH----HHHHHH-HHTTSHHHHHHHHHHHHHHHTTSCCHHH
T ss_pred CCCCHH----HHHHHH-HHhcCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 555555 454444 32 5677788988888754 6777644
No 11
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=89.67 E-value=0.21 Score=49.66 Aligned_cols=92 Identities=15% Similarity=0.090 Sum_probs=64.1
Q ss_pred cchhhcccccceEEecCCCCC-------CCCchHHHHHhhCceeEEeecCcccccccccCCC--CCCCceEEEeecCccc
Q 012984 312 PIRFMRPMLRATFCLQPPGDT-------PTRRSTFDGFLAGCIPVFFEEQSAKSQYVWHLPG--EMYDEFSVFIPKEDVV 382 (452)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~-------~ssrrl~DAi~~GCIPVii~d~~~~~qy~w~LPf--D~w~~fsV~I~e~dv~ 382 (452)
..+..+.|+++.|+|+..-.. -....++|+|++|+ |||.++.. .++- . =....+.++ ++.
T Consensus 224 ~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~-PVI~~~~~-------~~~~~v~-~~~~G~~~~--~~~ 292 (339)
T 3rhz_A 224 DEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGI-PVIVQEGI-------ANQELIE-NNGLGWIVK--DVE 292 (339)
T ss_dssp HHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTC-CEEEETTC-------TTTHHHH-HHTCEEEES--SHH
T ss_pred HHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCC-CEEEccCh-------hHHHHHH-hCCeEEEeC--CHH
Confidence 355667787899999972110 12345999999997 99998875 3332 1 123445454 455
Q ss_pred cccccHHHHHcCCCHHHHHHHHHHHHhhcceeeEec
Q 012984 383 FKGLKIVDVLMSIPNAKVRRMRERVIELMPGVIYRR 418 (452)
Q Consensus 383 ~~~~~l~~iL~~I~~~~i~~Mq~~l~~v~~~f~Y~~ 418 (452)
++.+.|..++++++.+|+++.++..+.+..+.
T Consensus 293 ----e~~~~i~~l~~~~~~~m~~na~~~a~~~~~~~ 324 (339)
T 3rhz_A 293 ----EAIMKVKNVNEDEYIELVKNVRSFNPILRKGF 324 (339)
T ss_dssp ----HHHHHHHHCCHHHHHHHHHHHHHHTHHHHTTH
T ss_pred ----HHHHHHHHhCHHHHHHHHHHHHHHHHHhhccH
Confidence 78888888999999999999998877766543
No 12
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=89.21 E-value=0.067 Score=47.16 Aligned_cols=43 Identities=14% Similarity=0.132 Sum_probs=32.6
Q ss_pred cchhhcccccceEEecCCCCCCCCchHHHHHhhCceeEEeecCc
Q 012984 312 PIRFMRPMLRATFCLQPPGDTPTRRSTFDGFLAGCIPVFFEEQS 355 (452)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~ssrrl~DAi~~GCIPVii~d~~ 355 (452)
..+..+.|+.+.+++.|.-.......++|||++|| |||.++..
T Consensus 88 ~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~ 130 (177)
T 2f9f_A 88 EEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGK-PVIAVNEG 130 (177)
T ss_dssp HHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTC-CEEEESSH
T ss_pred HHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCC-cEEEeCCC
Confidence 35578999999999997643333455899999998 88888753
No 13
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=89.12 E-value=0.23 Score=50.88 Aligned_cols=96 Identities=9% Similarity=0.124 Sum_probs=60.2
Q ss_pred cchhhcccccc----eEEecCCCCCCCCchHHHHHhhCceeEEeecCcccccccccCCCCCCCceEEEeecCcccccccc
Q 012984 312 PIRFMRPMLRA----TFCLQPPGDTPTRRSTFDGFLAGCIPVFFEEQSAKSQYVWHLPGEMYDEFSVFIPKEDVVFKGLK 387 (452)
Q Consensus 312 ~~~y~~~m~~S----~FCL~P~Gd~~ssrrl~DAi~~GCIPVii~d~~~~~qy~w~LPfD~w~~fsV~I~e~dv~~~~~~ 387 (452)
..+..+.|+.+ ..++.|.-.......+.|||++|| |||.++..... ++--+ ....+.++..|.. .
T Consensus 345 ~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~-PvI~s~~~g~~----e~v~~--~~~g~l~~~~d~~----~ 413 (499)
T 2r60_A 345 QQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGL-PAVVTRNGGPA----EILDG--GKYGVLVDPEDPE----D 413 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTC-CEEEESSBHHH----HHTGG--GTSSEEECTTCHH----H
T ss_pred HHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCC-CEEEecCCCHH----HHhcC--CceEEEeCCCCHH----H
Confidence 35678889999 888888644333445999999998 88888753110 11112 2235566666665 4
Q ss_pred HHHHHcCC--CHHHHHHHHHHHHhhcc-eeeEec
Q 012984 388 IVDVLMSI--PNAKVRRMRERVIELMP-GVIYRR 418 (452)
Q Consensus 388 l~~iL~~I--~~~~i~~Mq~~l~~v~~-~f~Y~~ 418 (452)
+.+.|..+ .++...+|.++.++... +|.|..
T Consensus 414 la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~ 447 (499)
T 2r60_A 414 IARGLLKAFESEETWSAYQEKGKQRVEERYTWQE 447 (499)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHHHHHHHSBHHH
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 44444332 57778888888776544 477644
No 14
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=88.29 E-value=1.5 Score=44.29 Aligned_cols=85 Identities=7% Similarity=-0.015 Sum_probs=54.7
Q ss_pred hhhcccccceEEecCCCCCCCCchHHHHHhhCceeEEeecCcccccccccCCCCCCC--------ceEEEeecCcccccc
Q 012984 314 RFMRPMLRATFCLQPPGDTPTRRSTFDGFLAGCIPVFFEEQSAKSQYVWHLPGEMYD--------EFSVFIPKEDVVFKG 385 (452)
Q Consensus 314 ~y~~~m~~S~FCL~P~Gd~~ssrrl~DAi~~GCIPVii~d~~~~~qy~w~LPfD~w~--------~fsV~I~e~dv~~~~ 385 (452)
...+.|+.+..++.|.-.......+.|||++|+ |||.++..... ++--| .+ ...+.++..|..
T Consensus 358 ~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~-PvI~s~~gg~~----e~v~~-~~~~~~~~~~~~G~l~~~~d~~--- 428 (485)
T 1rzu_A 358 LSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGC-IPVVARTGGLA----DTVID-ANHAALASKAATGVQFSPVTLD--- 428 (485)
T ss_dssp HHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC-EEEEESSHHHH----HHCCB-CCHHHHHTTCCCBEEESSCSHH---
T ss_pred HHHHHHhcCCEEEECcccCCCCHHHHHHHHCCC-CEEEeCCCChh----heecc-cccccccccCCcceEeCCCCHH---
Confidence 346889999999998765444556999999997 77777753110 11112 21 455677777766
Q ss_pred ccHHHHHcCC-----CHHHHHHHHHHHH
Q 012984 386 LKIVDVLMSI-----PNAKVRRMRERVI 408 (452)
Q Consensus 386 ~~l~~iL~~I-----~~~~i~~Mq~~l~ 408 (452)
.|.+.|..+ .++...+|.++.+
T Consensus 429 -~la~~i~~ll~~~~~~~~~~~~~~~~~ 455 (485)
T 1rzu_A 429 -GLKQAIRRTVRYYHDPKLWTQMQKLGM 455 (485)
T ss_dssp -HHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 555554432 5677888887775
No 15
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=86.74 E-value=0.16 Score=50.40 Aligned_cols=93 Identities=9% Similarity=0.109 Sum_probs=62.9
Q ss_pred cchhhcccccceEEecCCCCCCCCchHHHHHhhCceeEEeecCcccccccccCCCCCCCceEEEeecCccccccccHHHH
Q 012984 312 PIRFMRPMLRATFCLQPPGDTPTRRSTFDGFLAGCIPVFFEEQSAKSQYVWHLPGEMYDEFSVFIPKEDVVFKGLKIVDV 391 (452)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~ssrrl~DAi~~GCIPVii~d~~~~~qy~w~LPfD~w~~fsV~I~e~dv~~~~~~l~~i 391 (452)
..+..+.|+.+..++.|.-.......++|||++|| |||.++..... ++--+ ...+.++..|.. .+.+.
T Consensus 321 ~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~-Pvi~s~~~~~~----e~~~~---~~g~~~~~~d~~----~la~~ 388 (439)
T 3fro_A 321 REFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA-IPIASAVGGLR----DIITN---ETGILVKAGDPG----ELANA 388 (439)
T ss_dssp HHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTC-EEEEESSTHHH----HHCCT---TTCEEECTTCHH----HHHHH
T ss_pred HHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCC-CeEEcCCCCcc----eeEEc---CceEEeCCCCHH----HHHHH
Confidence 35577899999999999766555566999999996 88888753110 11112 245677777766 55555
Q ss_pred HcCC---CHHHHHHHHHHHHhhcceeeE
Q 012984 392 LMSI---PNAKVRRMRERVIELMPGVIY 416 (452)
Q Consensus 392 L~~I---~~~~i~~Mq~~l~~v~~~f~Y 416 (452)
|..+ .++...+|.++.++....|.|
T Consensus 389 i~~ll~~~~~~~~~~~~~~~~~~~~~s~ 416 (439)
T 3fro_A 389 ILKALELSRSDLSKFRENCKKRAMSFSW 416 (439)
T ss_dssp HHHHHHHTTTTTHHHHHHHHHHHHTSCH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHhhCcH
Confidence 5433 467788888888876666655
No 16
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=84.32 E-value=0.38 Score=47.78 Aligned_cols=90 Identities=13% Similarity=0.085 Sum_probs=56.3
Q ss_pred hhhcccccceEEecCCCCCCCCchHHHHHhhCceeEEeecCcccccccccCCCCCCCceEEEeecCccccccccHHHHHc
Q 012984 314 RFMRPMLRATFCLQPPGDTPTRRSTFDGFLAGCIPVFFEEQSAKSQYVWHLPGEMYDEFSVFIPKEDVVFKGLKIVDVLM 393 (452)
Q Consensus 314 ~y~~~m~~S~FCL~P~Gd~~ssrrl~DAi~~GCIPVii~d~~~~~qy~w~LPfD~w~~fsV~I~e~dv~~~~~~l~~iL~ 393 (452)
+..+.|+.+..++.|.-.......+.|||++|| |||.++..... ++--+ ....+.++ +.. .+.+.|.
T Consensus 308 ~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~-PvI~~~~~g~~----e~i~~--~~~g~l~~--d~~----~la~~i~ 374 (416)
T 2x6q_A 308 EVNAFQRASDVILQMSIREGFGLTVTEAMWKGK-PVIGRAVGGIK----FQIVD--GETGFLVR--DAN----EAVEVVL 374 (416)
T ss_dssp HHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTC-CEEEESCHHHH----HHCCB--TTTEEEES--SHH----HHHHHHH
T ss_pred HHHHHHHhCCEEEECCCcCCCccHHHHHHHcCC-CEEEccCCCCh----hheec--CCCeEEEC--CHH----HHHHHHH
Confidence 577888999999888744444456999999998 88888753100 11112 23445555 444 4444443
Q ss_pred CC--CHHHHHHHHHHHHhhc-ceeeE
Q 012984 394 SI--PNAKVRRMRERVIELM-PGVIY 416 (452)
Q Consensus 394 ~I--~~~~i~~Mq~~l~~v~-~~f~Y 416 (452)
.+ .++...+|.++.++.. .+|.|
T Consensus 375 ~ll~~~~~~~~~~~~a~~~~~~~fs~ 400 (416)
T 2x6q_A 375 YLLKHPEVSKEMGAKAKERVRKNFII 400 (416)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHTBH
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHcCH
Confidence 33 5778888888877643 35655
No 17
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=83.31 E-value=0.61 Score=47.36 Aligned_cols=86 Identities=10% Similarity=0.084 Sum_probs=55.2
Q ss_pred hhhcccccceEEecCCCCCCCCchHHHHHhhCceeEEeecCcccccccccCCCCCCC--------ceEEEeecCcccccc
Q 012984 314 RFMRPMLRATFCLQPPGDTPTRRSTFDGFLAGCIPVFFEEQSAKSQYVWHLPGEMYD--------EFSVFIPKEDVVFKG 385 (452)
Q Consensus 314 ~y~~~m~~S~FCL~P~Gd~~ssrrl~DAi~~GCIPVii~d~~~~~qy~w~LPfD~w~--------~fsV~I~e~dv~~~~ 385 (452)
...+.|+.+..++.|.-.......+.|||++|| |||.++..... ++--+ -. ...+.++..+..
T Consensus 359 ~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~-PvI~s~~gg~~----e~v~~-~~~~~~~~~~~~G~l~~~~d~~--- 429 (485)
T 2qzs_A 359 FSHRIMGGADVILVPSRFEPCGLTQLYGLKYGT-LPLVRRTGGLA----DTVSD-CSLENLADGVASGFVFEDSNAW--- 429 (485)
T ss_dssp HHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC-EEEEESSHHHH----HHCCB-CCHHHHHTTCCCBEEECSSSHH---
T ss_pred HHHHHHHhCCEEEECCccCCCcHHHHHHHHCCC-CEEECCCCCcc----ceecc-CccccccccccceEEECCCCHH---
Confidence 346889999999998755444556899999997 77777652100 11112 11 456677777766
Q ss_pred ccHHHHHcCC-----CHHHHHHHHHHHHh
Q 012984 386 LKIVDVLMSI-----PNAKVRRMRERVIE 409 (452)
Q Consensus 386 ~~l~~iL~~I-----~~~~i~~Mq~~l~~ 409 (452)
.|.+.|..+ .++...+|.++.++
T Consensus 430 -~la~~i~~ll~~~~~~~~~~~~~~~~~~ 457 (485)
T 2qzs_A 430 -SLLRAIRRAFVLWSRPSLWRFVQRQAMA 457 (485)
T ss_dssp -HHHHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 555555442 56778888877753
No 18
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=76.11 E-value=0.95 Score=45.76 Aligned_cols=94 Identities=12% Similarity=0.022 Sum_probs=53.8
Q ss_pred cchhhcccccceEEecCCC-CCCCCchHHHHHhhCceeEEeecCcccccccccCCCCCCCceEEEeecCccccccccHHH
Q 012984 312 PIRFMRPMLRATFCLQPPG-DTPTRRSTFDGFLAGCIPVFFEEQSAKSQYVWHLPGEMYDEFSVFIPKEDVVFKGLKIVD 390 (452)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~G-d~~ssrrl~DAi~~GCIPVii~d~~~~~qy~w~LPfD~w~~fsV~I~e~dv~~~~~~l~~ 390 (452)
..+..+.|+.+..++.|.- .+++- -+.|||++|| |||..+.-. .++.-| ..-.+.++..|.. .|.+
T Consensus 305 ~~~l~~~~~~adv~v~pS~~E~~g~-~~lEAmA~G~-PVV~~~~g~-----~e~v~~--~~~G~lv~~~d~~----~la~ 371 (413)
T 2x0d_A 305 LEDYADLLKRSSIGISLMISPHPSY-PPLEMAHFGL-RVITNKYEN-----KDLSNW--HSNIVSLEQLNPE----NIAE 371 (413)
T ss_dssp HHHHHHHHHHCCEEECCCSSSSCCS-HHHHHHHTTC-EEEEECBTT-----BCGGGT--BTTEEEESSCSHH----HHHH
T ss_pred HHHHHHHHHhCCEEEEecCCCCCCc-HHHHHHhCCC-cEEEeCCCc-----chhhhc--CCCEEEeCCCCHH----HHHH
Confidence 4577889999999998863 34443 4789999998 777755421 122212 3456778888877 5655
Q ss_pred HHcCCCHHHHHHHHHHHHhhcceeeEecC
Q 012984 391 VLMSIPNAKVRRMRERVIELMPGVIYRRH 419 (452)
Q Consensus 391 iL~~I~~~~i~~Mq~~l~~v~~~f~Y~~p 419 (452)
.|..+-.+.-.+.+ +..+....|.|...
T Consensus 372 ai~~ll~~~~~~~~-~~~~~~~~~~W~~~ 399 (413)
T 2x0d_A 372 TLVELCMSFNNRDV-DKKESSNMMFYINE 399 (413)
T ss_dssp HHHHHHHHTC--------CCBSCGGGCCC
T ss_pred HHHHHHcCHHHHHH-hHHHHHHhCCHHHH
Confidence 55443222111111 33444456777554
No 19
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=74.05 E-value=2.9 Score=46.43 Aligned_cols=94 Identities=10% Similarity=0.079 Sum_probs=57.3
Q ss_pred hhhcccc-cceEEecCCCCCCCCchHHHHHhhCceeEEeecCcccccccccCCCCCCCceEEEeecCccccccccHHHHH
Q 012984 314 RFMRPML-RATFCLQPPGDTPTRRSTFDGFLAGCIPVFFEEQSAKSQYVWHLPGEMYDEFSVFIPKEDVVFKGLKIVDVL 392 (452)
Q Consensus 314 ~y~~~m~-~S~FCL~P~Gd~~ssrrl~DAi~~GCIPVii~d~~~~~qy~w~LPfD~w~~fsV~I~e~dv~~~~~~l~~iL 392 (452)
+....++ .+..++.|.=.......+.|||++|| |||.++..... ++--| ..-.+.++..|.. .+.+.|
T Consensus 656 eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~-PVIasd~GG~~----EiV~d--g~~Gllv~p~D~e----~LA~aI 724 (816)
T 3s28_A 656 ELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCKGGPA----EIIVH--GKSGFHIDPYHGD----QAADTL 724 (816)
T ss_dssp HHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTC-CEEEESSBTHH----HHCCB--TTTBEEECTTSHH----HHHHHH
T ss_pred HHHHHHHhcCeEEEECCCccCccHHHHHHHHcCC-CEEEeCCCChH----HHHcc--CCcEEEeCCCCHH----HHHHHH
Confidence 3445565 34566666544334455899999998 88888753110 11112 3345677777766 555544
Q ss_pred cC------CCHHHHHHHHHHHHhhc-ceeeEec
Q 012984 393 MS------IPNAKVRRMRERVIELM-PGVIYRR 418 (452)
Q Consensus 393 ~~------I~~~~i~~Mq~~l~~v~-~~f~Y~~ 418 (452)
.. -.++...+|.++.++.. .+|.|..
T Consensus 725 ~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~ 757 (816)
T 3s28_A 725 ADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQI 757 (816)
T ss_dssp HHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHH
T ss_pred HHHHHHhccCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 22 15778888988888755 7787754
No 20
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=67.26 E-value=4.4 Score=44.07 Aligned_cols=104 Identities=11% Similarity=0.065 Sum_probs=63.0
Q ss_pred chhhcccccceEEecCCCCCCCCchHHHHHhhCceeEEeecCcccccccccCCCCCC----CceEEEeecCc---ccccc
Q 012984 313 IRFMRPMLRATFCLQPPGDTPTRRSTFDGFLAGCIPVFFEEQSAKSQYVWHLPGEMY----DEFSVFIPKED---VVFKG 385 (452)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~ssrrl~DAi~~GCIPVii~d~~~~~qy~w~LPfD~w----~~fsV~I~e~d---v~~~~ 385 (452)
.++.+.|+.+...+.|.=..+...-..|||++|+ |||.++-..... +..... - ....+.|+..+ ..+-.
T Consensus 510 ~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~-PvI~s~~gG~~d--~V~dg~-~~~~~~~tG~lV~~rd~~d~ee~a 585 (725)
T 3nb0_A 510 LDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGV-PSITTNVSGFGS--YMEDLI-ETNQAKDYGIYIVDRRFKAPDESV 585 (725)
T ss_dssp CCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTC-CEEEETTBHHHH--HHHTTS-CHHHHHHTTEEEECCSSSCHHHHH
T ss_pred hHHHHHHhhceEEEeccccCCCCHHHHHHHHcCC-CEEEeCCCChhh--hhhccc-cccCCCCceEEEeCCCCCCHHHHH
Confidence 4788999999999999755444455789999997 677776531000 011111 0 02344553221 11000
Q ss_pred ccHHHHHc---CCCHHHHHHHHHHHHhhcceeeEecCC
Q 012984 386 LKIVDVLM---SIPNAKVRRMRERVIELMPGVIYRRHE 420 (452)
Q Consensus 386 ~~l~~iL~---~I~~~~i~~Mq~~l~~v~~~f~Y~~p~ 420 (452)
..|.+.|. .-++++..+|+++.+++...|.|....
T Consensus 586 eaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA 623 (725)
T 3nb0_A 586 EQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMG 623 (725)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 03444443 347888899999999999999997643
No 21
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=66.93 E-value=0.66 Score=45.28 Aligned_cols=75 Identities=17% Similarity=0.228 Sum_probs=46.7
Q ss_pred chhhcccccceEEecCCCCCCCCchHHHHHhhCceeEEeecCcccccccccCCC--CCCCceEEEeecCccccccccHHH
Q 012984 313 IRFMRPMLRATFCLQPPGDTPTRRSTFDGFLAGCIPVFFEEQSAKSQYVWHLPG--EMYDEFSVFIPKEDVVFKGLKIVD 390 (452)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~ssrrl~DAi~~GCIPVii~d~~~~~qy~w~LPf--D~w~~fsV~I~e~dv~~~~~~l~~ 390 (452)
.+..+.|+.+...+.|.|.. +.|||++|+ |||.++... ..+- + -. ..+.++. |.. .|.+
T Consensus 274 ~~~~~~~~~ad~~v~~Sg~~-----~lEA~a~G~-PvI~~~~~~------~~~e~v~-~g-~g~lv~~-d~~----~la~ 334 (384)
T 1vgv_A 274 LPFVWLMNHAWLILTDSGGI-----QEEAPSLGK-PVLVMRDTT------ERPEAVT-AG-TVRLVGT-DKQ----RIVE 334 (384)
T ss_dssp HHHHHHHHHCSEEEESSSTG-----GGTGGGGTC-CEEEESSCC------SCHHHHH-HT-SEEEECS-SHH----HHHH
T ss_pred HHHHHHHHhCcEEEECCcch-----HHHHHHcCC-CEEEccCCC------Ccchhhh-CC-ceEEeCC-CHH----HHHH
Confidence 45678899999988887421 679999997 999987521 1221 2 12 5666655 544 4544
Q ss_pred HHcCC--CHHHHHHHHHH
Q 012984 391 VLMSI--PNAKVRRMRER 406 (452)
Q Consensus 391 iL~~I--~~~~i~~Mq~~ 406 (452)
.|..+ .++...+|.++
T Consensus 335 ~i~~ll~d~~~~~~~~~~ 352 (384)
T 1vgv_A 335 EVTRLLKDENEYQAMSRA 352 (384)
T ss_dssp HHHHHHHCHHHHHHHHSS
T ss_pred HHHHHHhChHHHhhhhhc
Confidence 44433 45566666554
No 22
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=66.42 E-value=2.2 Score=40.80 Aligned_cols=73 Identities=12% Similarity=0.048 Sum_probs=47.5
Q ss_pred chhhcccccceEEecCCC----------CCCCCchHHHHHhhCceeEEeecCcccccccccCCCCCC--CceEEEeecCc
Q 012984 313 IRFMRPMLRATFCLQPPG----------DTPTRRSTFDGFLAGCIPVFFEEQSAKSQYVWHLPGEMY--DEFSVFIPKED 380 (452)
Q Consensus 313 ~~y~~~m~~S~FCL~P~G----------d~~ssrrl~DAi~~GCIPVii~d~~~~~qy~w~LPfD~w--~~fsV~I~e~d 380 (452)
.+..+.|+.+..++.|.- .......+.|||++|| |||.++..... ++ .. - ....+.++. +
T Consensus 223 ~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~-PvI~s~~~~~~----e~-~~-~~~~~~g~~~~~-d 294 (342)
T 2iuy_A 223 ERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGT-PVVGTGNGCLA----EI-VP-SVGEVVGYGTDF-A 294 (342)
T ss_dssp HHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTC-CEEECCTTTHH----HH-GG-GGEEECCSSSCC-C
T ss_pred HHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCC-CEEEcCCCChH----HH-hc-ccCCCceEEcCC-C
Confidence 456788999999999876 3344456999999997 88888753110 00 01 1 234455565 6
Q ss_pred cccccccHHHHHcCCCH
Q 012984 381 VVFKGLKIVDVLMSIPN 397 (452)
Q Consensus 381 v~~~~~~l~~iL~~I~~ 397 (452)
.. .+.+.|..+-.
T Consensus 295 ~~----~l~~~i~~l~~ 307 (342)
T 2iuy_A 295 PD----EARRTLAGLPA 307 (342)
T ss_dssp HH----HHHHHHHTSCC
T ss_pred HH----HHHHHHHHHHH
Confidence 66 77777776654
No 23
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=62.40 E-value=2.5 Score=43.74 Aligned_cols=37 Identities=19% Similarity=0.389 Sum_probs=30.0
Q ss_pred chhhcccccceEEecCCCCCCCCchHHHHHhhCceeEEe
Q 012984 313 IRFMRPMLRATFCLQPPGDTPTRRSTFDGFLAGCIPVFF 351 (452)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~ssrrl~DAi~~GCIPVii 351 (452)
.+..+.|+.+..++.|.-.+. ...+.|||.+|+ |||.
T Consensus 445 ~~~~~~~~~adv~v~ps~~~~-g~~~lEAma~G~-Pvv~ 481 (568)
T 2vsy_A 445 PQYLARYRHADLFLDTHPYNA-HTTASDALWTGC-PVLT 481 (568)
T ss_dssp HHHHHHGGGCSEEECCSSSCC-SHHHHHHHHTTC-CEEB
T ss_pred HHHHHHHhcCCEEeeCCCCCC-cHHHHHHHhCCC-CEEe
Confidence 467888999999998876633 345889999996 9999
No 24
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=60.84 E-value=26 Score=29.62 Aligned_cols=87 Identities=13% Similarity=0.083 Sum_probs=45.9
Q ss_pred hccc--ccceEEecCCCCCCCCchHHHHHhhCceeEEeecCcccccccccCCCCCCCceEEEeecCccccccccHHHHHc
Q 012984 316 MRPM--LRATFCLQPPGDTPTRRSTFDGFLAGCIPVFFEEQSAKSQYVWHLPGEMYDEFSVFIPKEDVVFKGLKIVDVLM 393 (452)
Q Consensus 316 ~~~m--~~S~FCL~P~Gd~~ssrrl~DAi~~GCIPVii~d~~~~~qy~w~LPfD~w~~fsV~I~e~dv~~~~~~l~~iL~ 393 (452)
.+.| ..+....+..|. ..+.|||.+| +|+|+.+.. ..|..+-.-+. .....+.++..++... .|.+.|+
T Consensus 79 ~~~l~~~~ad~~I~~~G~----~t~~Ea~~~G-~P~i~~p~~-~~Q~~na~~l~-~~g~g~~~~~~~~~~~--~l~~~i~ 149 (170)
T 2o6l_A 79 NDLLGHPKTRAFITHGGA----NGIYEAIYHG-IPMVGIPLF-ADQPDNIAHMK-ARGAAVRVDFNTMSST--DLLNALK 149 (170)
T ss_dssp HHHHTSTTEEEEEECCCH----HHHHHHHHHT-CCEEECCCS-TTHHHHHHHHH-TTTSEEECCTTTCCHH--HHHHHHH
T ss_pred HHHhcCCCcCEEEEcCCc----cHHHHHHHcC-CCEEeccch-hhHHHHHHHHH-HcCCeEEeccccCCHH--HHHHHHH
Confidence 3455 677777776553 4588999999 699988753 11111100012 3456777876543211 3444444
Q ss_pred CCCHHHHHHHHHHHHhhcce
Q 012984 394 SIPNAKVRRMRERVIELMPG 413 (452)
Q Consensus 394 ~I~~~~i~~Mq~~l~~v~~~ 413 (452)
.+-.+ .+|+++.+++...
T Consensus 150 ~ll~~--~~~~~~a~~~~~~ 167 (170)
T 2o6l_A 150 RVIND--PSYKENVMKLSRI 167 (170)
T ss_dssp HHHHC--HHHHHHHHHHC--
T ss_pred HHHcC--HHHHHHHHHHHHH
Confidence 33111 2367777666544
No 25
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=58.05 E-value=5.2 Score=41.43 Aligned_cols=92 Identities=10% Similarity=0.004 Sum_probs=55.9
Q ss_pred cchhhcccccceEEecCC-CCCCCCchHHHHHhhCc----eeEEeecCcccccccccCCCCCCCceEEEeecCccccccc
Q 012984 312 PIRFMRPMLRATFCLQPP-GDTPTRRSTFDGFLAGC----IPVFFEEQSAKSQYVWHLPGEMYDEFSVFIPKEDVVFKGL 386 (452)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~-Gd~~ssrrl~DAi~~GC----IPVii~d~~~~~qy~w~LPfD~w~~fsV~I~e~dv~~~~~ 386 (452)
..+....++.+.-|+.|+ -+|.+-- ..|||++|+ -|||+++...-. -++ + -++.|+..|+..-..
T Consensus 342 ~~el~~ly~~ADv~v~pS~~EGfgLv-~lEAmA~g~~~~~gpvV~S~~~G~~---~~l--~----~g~lv~p~d~~~lA~ 411 (482)
T 1uqt_A 342 RKLLMKIFRYSDVGLVTPLRDGMNLV-AKEYVAAQDPANPGVLVLSQFAGAA---NEL--T----SALIVNPYDRDEVAA 411 (482)
T ss_dssp HHHHHHHHHHCSEEEECCSSBSCCHH-HHHHHHHSCTTSCCEEEEETTBGGG---GTC--T----TSEEECTTCHHHHHH
T ss_pred HHHHHHHHHHccEEEECCCcccCCch-HHHHHHhCCCCCCCCEEEECCCCCH---HHh--C----CeEEECCCCHHHHHH
Confidence 456778888888888775 4555544 779999998 689998743100 012 2 246777777661111
Q ss_pred cHHHHHcCCCHHHHHHHHHHHHhhccee
Q 012984 387 KIVDVLMSIPNAKVRRMRERVIELMPGV 414 (452)
Q Consensus 387 ~l~~iL~~I~~~~i~~Mq~~l~~v~~~f 414 (452)
.|..+| ..++++..+|.+++++....+
T Consensus 412 ai~~lL-~~~~~~r~~~~~~~~~~v~~~ 438 (482)
T 1uqt_A 412 ALDRAL-TMSLAERISRHAEMLDVIVKN 438 (482)
T ss_dssp HHHHHH-TCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHH-cCCHHHHHHHHHHHHHHHHhC
Confidence 233334 336676777766666554444
No 26
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=57.89 E-value=1.4 Score=42.60 Aligned_cols=36 Identities=22% Similarity=0.277 Sum_probs=29.0
Q ss_pred chhhcccccceEEecCCCCCCCCchHHHHHhhCceeEEeecC
Q 012984 313 IRFMRPMLRATFCLQPPGDTPTRRSTFDGFLAGCIPVFFEEQ 354 (452)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~ssrrl~DAi~~GCIPVii~d~ 354 (452)
.+..+.|+.+.+++.|.| .-+.|||++|+ |||.++.
T Consensus 274 ~~~~~~~~~ad~~v~~sg-----~~~lEA~a~G~-Pvi~~~~ 309 (375)
T 3beo_A 274 IDFHNVAARSYLMLTDSG-----GVQEEAPSLGV-PVLVLRD 309 (375)
T ss_dssp HHHHHHHHTCSEEEECCH-----HHHHHHHHHTC-CEEECSS
T ss_pred HHHHHHHHhCcEEEECCC-----ChHHHHHhcCC-CEEEecC
Confidence 367788999999998873 22789999997 9998865
No 27
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=46.93 E-value=22 Score=34.72 Aligned_cols=87 Identities=14% Similarity=0.127 Sum_probs=53.9
Q ss_pred hhhcccccceEEecCCCCCCCCchHHHHHhhCceeEEeecCcccccccccCC-----CCCCCceEEEeecCccccccccH
Q 012984 314 RFMRPMLRATFCLQPPGDTPTRRSTFDGFLAGCIPVFFEEQSAKSQYVWHLP-----GEMYDEFSVFIPKEDVVFKGLKI 388 (452)
Q Consensus 314 ~y~~~m~~S~FCL~P~Gd~~ssrrl~DAi~~GCIPVii~d~~~~~qy~w~LP-----fD~w~~fsV~I~e~dv~~~~~~l 388 (452)
+..+.|+.+..+.+-.| ...+.|++.+|. |+|+-+-.... .=|.. +. -...++.|+++++... .|
T Consensus 245 dm~~~l~~aDlvI~raG----~~Tv~E~~a~G~-P~Ilip~p~~~--~~~Q~~NA~~l~-~~G~a~~l~~~~~~~~--~L 314 (365)
T 3s2u_A 245 DMAAAYAWADLVICRAG----ALTVSELTAAGL-PAFLVPLPHAI--DDHQTRNAEFLV-RSGAGRLLPQKSTGAA--EL 314 (365)
T ss_dssp CHHHHHHHCSEEEECCC----HHHHHHHHHHTC-CEEECC-------CCHHHHHHHHHH-TTTSEEECCTTTCCHH--HH
T ss_pred hhhhhhccceEEEecCC----cchHHHHHHhCC-CeEEeccCCCC--CcHHHHHHHHHH-HCCCEEEeecCCCCHH--HH
Confidence 45678999999988766 234789999997 88875431000 00111 11 2456889998876422 24
Q ss_pred HHHHcCC--CHHHHHHHHHHHHhh
Q 012984 389 VDVLMSI--PNAKVRRMRERVIEL 410 (452)
Q Consensus 389 ~~iL~~I--~~~~i~~Mq~~l~~v 410 (452)
.+.|..+ .++++.+|.++.+++
T Consensus 315 ~~~i~~ll~d~~~~~~m~~~a~~~ 338 (365)
T 3s2u_A 315 AAQLSEVLMHPETLRSMADQARSL 338 (365)
T ss_dssp HHHHHHHHHCTHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCHHHHHHHHHHHHhc
Confidence 4333332 478899999998765
No 28
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=46.41 E-value=18 Score=37.73 Aligned_cols=102 Identities=10% Similarity=0.024 Sum_probs=53.1
Q ss_pred chhhcccccceEEecCCCCCCCCchHHHHHhhCceeEEeecCcccc------cccccCCCCCCCceEEEeecCccccccc
Q 012984 313 IRFMRPMLRATFCLQPPGDTPTRRSTFDGFLAGCIPVFFEEQSAKS------QYVWHLPGEMYDEFSVFIPKEDVVFKGL 386 (452)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~ssrrl~DAi~~GCIPVii~d~~~~~------qy~w~LPfD~w~~fsV~I~e~dv~~~~~ 386 (452)
......++.|.+.+.|.=..+-...+.|||++||.+ |.++--.-. .-.|..+. .+.-...++..|...-..
T Consensus 393 ~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~Pv-I~s~~gG~~e~V~dg~~G~~~~~--~~~~g~l~~~~d~~~la~ 469 (536)
T 3vue_A 393 PLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPC-ACASTGGLVDTVIEGKTGFHMGR--LSVDCKVVEPSDVKKVAA 469 (536)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCE-EECSCTHHHHHCCBTTTEEECCC--CCSCTTCCCHHHHHHHHH
T ss_pred HHHHHHHHhhheeecccccCCCCHHHHHHHHcCCCE-EEcCCCCchheeeCCCCcccccc--CCCceeEECCCCHHHHHH
Confidence 345567888999999875555555688999999855 555421000 00011111 011112344444440001
Q ss_pred cHHHHHcCCCHHHHHHHHHHHHhhcceeeEecC
Q 012984 387 KIVDVLMSIPNAKVRRMRERVIELMPGVIYRRH 419 (452)
Q Consensus 387 ~l~~iL~~I~~~~i~~Mq~~l~~v~~~f~Y~~p 419 (452)
.|...|....++++.+|+++. +.+.|.|...
T Consensus 470 ai~ral~~~~~~~~~~~~~~a--m~~~fSW~~~ 500 (536)
T 3vue_A 470 TLKRAIKVVGTPAYEEMVRNC--MNQDLSWKGP 500 (536)
T ss_dssp HHHHHHHHTTSHHHHHHHHHH--HHSCCSSHHH
T ss_pred HHHHHHHhcCcHHHHHHHHHH--HHhcCCHHHH
Confidence 233334434566778887765 3467777653
No 29
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=28.14 E-value=16 Score=36.29 Aligned_cols=36 Identities=25% Similarity=0.272 Sum_probs=28.3
Q ss_pred chhhcccccceEEecCCCCCCCCchHHHHHhhCceeEEeecC
Q 012984 313 IRFMRPMLRATFCLQPPGDTPTRRSTFDGFLAGCIPVFFEEQ 354 (452)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~ssrrl~DAi~~GCIPVii~d~ 354 (452)
.++...|+.|.+.+.+.| +. ..||+.+|+ |||+.++
T Consensus 299 ~~~~~l~~~ad~vv~~SG-g~----~~EA~a~G~-PvV~~~~ 334 (396)
T 3dzc_A 299 LPFVYLMDRAHIILTDSG-GI----QEEAPSLGK-PVLVMRE 334 (396)
T ss_dssp HHHHHHHHHCSEEEESCS-GG----GTTGGGGTC-CEEECCS
T ss_pred HHHHHHHHhcCEEEECCc-cH----HHHHHHcCC-CEEEccC
Confidence 467789999999998886 22 259999986 9999854
No 30
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=24.96 E-value=29 Score=34.13 Aligned_cols=66 Identities=18% Similarity=0.081 Sum_probs=41.4
Q ss_pred hcccccceEEecCCCCCCCCchHHHHHhhCceeEEeecCcccccccccCCC-----CCCCceEEEeecCccccccccHHH
Q 012984 316 MRPMLRATFCLQPPGDTPTRRSTFDGFLAGCIPVFFEEQSAKSQYVWHLPG-----EMYDEFSVFIPKEDVVFKGLKIVD 390 (452)
Q Consensus 316 ~~~m~~S~FCL~P~Gd~~ssrrl~DAi~~GCIPVii~d~~~~~qy~w~LPf-----D~w~~fsV~I~e~dv~~~~~~l~~ 390 (452)
.+.|.++...+...|. ..+.||+.+| +|+|+-+... +.+. . .....+.++.+++.. . .|.+
T Consensus 296 ~~~l~~~d~~v~~~G~----~t~~Ea~~~G-~P~i~~p~~~------dQ~~na~~l~-~~g~g~~~~~~~~~~-~-~l~~ 361 (415)
T 1iir_A 296 QVLFGRVAAVIHHGGA----GTTHVAARAG-APQILLPQMA------DQPYYAGRVA-ELGVGVAHDGPIPTF-D-SLSA 361 (415)
T ss_dssp HHHGGGSSEEEECCCH----HHHHHHHHHT-CCEEECCCST------THHHHHHHHH-HHTSEEECSSSSCCH-H-HHHH
T ss_pred HHHHhhCCEEEeCCCh----hHHHHHHHcC-CCEEECCCCC------ccHHHHHHHH-HCCCcccCCcCCCCH-H-HHHH
Confidence 5678888888887664 4588999999 5888765421 2222 2 345677777654321 1 4666
Q ss_pred HHcCC
Q 012984 391 VLMSI 395 (452)
Q Consensus 391 iL~~I 395 (452)
.|+.+
T Consensus 362 ~i~~l 366 (415)
T 1iir_A 362 ALATA 366 (415)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66655
No 31
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=24.60 E-value=52 Score=31.86 Aligned_cols=83 Identities=14% Similarity=0.112 Sum_probs=45.6
Q ss_pred hhhcccccceEEecCCCCCCCCchHHHHHhhCceeEEeecCcccccccccCCC-----CCCCceEEEeecCccccccccH
Q 012984 314 RFMRPMLRATFCLQPPGDTPTRRSTFDGFLAGCIPVFFEEQSAKSQYVWHLPG-----EMYDEFSVFIPKEDVVFKGLKI 388 (452)
Q Consensus 314 ~y~~~m~~S~FCL~P~Gd~~ssrrl~DAi~~GCIPVii~d~~~~~qy~w~LPf-----D~w~~fsV~I~e~dv~~~~~~l 388 (452)
+..++|..+..+....|. ..+.||+.+|. |||+.+.. .+.+. . .....+.++.+++... .|
T Consensus 293 ~~~~ll~~ad~~v~~gG~----~t~~Ea~~~G~-P~v~~p~~------~~q~~~a~~~~-~~g~g~~~~~~~~~~~--~l 358 (398)
T 4fzr_A 293 PLSAIMPACDVVVHHGGH----GTTLTCLSEGV-PQVSVPVI------AEVWDSARLLH-AAGAGVEVPWEQAGVE--SV 358 (398)
T ss_dssp CHHHHGGGCSEEEECCCH----HHHHHHHHTTC-CEEECCCS------GGGHHHHHHHH-HTTSEEECC---------CH
T ss_pred CHHHHHhhCCEEEecCCH----HHHHHHHHhCC-CEEecCCc------hhHHHHHHHHH-HcCCEEecCcccCCHH--HH
Confidence 466788888888877662 34789999995 88885432 12222 2 2446677765532211 34
Q ss_pred HHHHcCC--CHHHHHHHHHHHHhh
Q 012984 389 VDVLMSI--PNAKVRRMRERVIEL 410 (452)
Q Consensus 389 ~~iL~~I--~~~~i~~Mq~~l~~v 410 (452)
.+.|+.+ .++..++|++...++
T Consensus 359 ~~ai~~ll~~~~~~~~~~~~~~~~ 382 (398)
T 4fzr_A 359 LAACARIRDDSSYVGNARRLAAEM 382 (398)
T ss_dssp HHHHHHHHHCTHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHH
Confidence 4333322 355566666665543
No 32
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=24.24 E-value=42 Score=32.84 Aligned_cols=41 Identities=7% Similarity=-0.056 Sum_probs=28.5
Q ss_pred chhhcccccceEEecCCCCC-CCCchHHHHHhhCceeEEeecC
Q 012984 313 IRFMRPMLRATFCLQPPGDT-PTRRSTFDGFLAGCIPVFFEEQ 354 (452)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~-~ssrrl~DAi~~GCIPVii~d~ 354 (452)
.+....|+.+..++.|.... .....+.|||++|| |||.+++
T Consensus 269 ~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~-PVI~~~~ 310 (374)
T 2xci_A 269 GILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGI-PVIYGPY 310 (374)
T ss_dssp SCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTC-CEEECSC
T ss_pred HHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhCC-CEEECCC
Confidence 56778899998766654322 11244889999998 8887654
No 33
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=23.11 E-value=37 Score=32.86 Aligned_cols=84 Identities=8% Similarity=0.048 Sum_probs=48.7
Q ss_pred hhhcccccceEEecCCCCCCCCchHHHHHhhCceeEEeecCcccccccccCCC-----CCCCceEEEeecCccccccccH
Q 012984 314 RFMRPMLRATFCLQPPGDTPTRRSTFDGFLAGCIPVFFEEQSAKSQYVWHLPG-----EMYDEFSVFIPKEDVVFKGLKI 388 (452)
Q Consensus 314 ~y~~~m~~S~FCL~P~Gd~~ssrrl~DAi~~GCIPVii~d~~~~~qy~w~LPf-----D~w~~fsV~I~e~dv~~~~~~l 388 (452)
+..+.|+.+...+.+.|. ..+.|||.+|+ |||+.+... +.+. . -....+.++..++... .|
T Consensus 301 ~~~~~l~~ad~~v~~~g~----~t~~Ea~a~G~-P~v~~p~~~------~q~~~~~~v~-~~g~g~~~~~~~~~~~--~l 366 (412)
T 3otg_A 301 PQAALLPHVDLVVHHGGS----GTTLGALGAGV-PQLSFPWAG------DSFANAQAVA-QAGAGDHLLPDNISPD--SV 366 (412)
T ss_dssp CHHHHGGGCSEEEESCCH----HHHHHHHHHTC-CEEECCCST------THHHHHHHHH-HHTSEEECCGGGCCHH--HH
T ss_pred CHHHHHhcCcEEEECCch----HHHHHHHHhCC-CEEecCCch------hHHHHHHHHH-HcCCEEecCcccCCHH--HH
Confidence 467888999988887763 34889999995 999854320 1111 1 1345667776532111 34
Q ss_pred HHHHcCC--CHHHHHHHHHHHHhhc
Q 012984 389 VDVLMSI--PNAKVRRMRERVIELM 411 (452)
Q Consensus 389 ~~iL~~I--~~~~i~~Mq~~l~~v~ 411 (452)
.+.|..+ .++...+|++..+++.
T Consensus 367 ~~ai~~ll~~~~~~~~~~~~~~~~~ 391 (412)
T 3otg_A 367 SGAAKRLLAEESYRAGARAVAAEIA 391 (412)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHh
Confidence 4443332 3556666666655443
No 34
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=23.06 E-value=31 Score=34.33 Aligned_cols=98 Identities=12% Similarity=0.175 Sum_probs=57.5
Q ss_pred chhhcccccceEEecCCCCCCCCchHHHHHhhCceeEEeecCcccccccccCCC--CCCCceEEEeecCccccccccHHH
Q 012984 313 IRFMRPMLRATFCLQPPGDTPTRRSTFDGFLAGCIPVFFEEQSAKSQYVWHLPG--EMYDEFSVFIPKEDVVFKGLKIVD 390 (452)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~ssrrl~DAi~~GCIPVii~d~~~~~qy~w~LPf--D~w~~fsV~I~e~dv~~~~~~l~~ 390 (452)
.++...|+.|.+.+.+.|. - ..||+.+| +|||+.+++. ..|. + ....+.++. +.. .|.+
T Consensus 293 ~~~~~l~~~ad~vv~~SGg----~-~~EA~a~g-~PvV~~~~~~------~~~e~v~--~g~~~lv~~-d~~----~l~~ 353 (403)
T 3ot5_A 293 IDFHNFLRKSYLVFTDSGG----V-QEEAPGMG-VPVLVLRDTT------ERPEGIE--AGTLKLIGT-NKE----NLIK 353 (403)
T ss_dssp HHHHHHHHHEEEEEECCHH----H-HHHGGGTT-CCEEECCSSC------SCHHHHH--HTSEEECCS-CHH----HHHH
T ss_pred HHHHHHHHhcCEEEECCcc----H-HHHHHHhC-CCEEEecCCC------cchhhee--CCcEEEcCC-CHH----HHHH
Confidence 4788999999998877642 1 15999998 5999885431 1221 2 123445543 333 3444
Q ss_pred HHcCC--CHHHHHHHHHHHHhhcceeeEecCCcccccCCcccHHHHHHHHHHHHhhh
Q 012984 391 VLMSI--PNAKVRRMRERVIELMPGVIYRRHESTLGLKAKKDAFDIAIEGTLERIRS 445 (452)
Q Consensus 391 iL~~I--~~~~i~~Mq~~l~~v~~~f~Y~~p~~~~~~~~~~DAf~~~~~~l~~Ri~~ 445 (452)
.+..+ .++...+|.++.. . | +. ++|-+-+++.|...+..
T Consensus 354 ai~~ll~~~~~~~~m~~~~~----~--~----g~------~~aa~rI~~~l~~~l~~ 394 (403)
T 3ot5_A 354 EALDLLDNKESHDKMAQAAN----P--Y----GD------GFAANRILAAIKSHFEE 394 (403)
T ss_dssp HHHHHHHCHHHHHHHHHSCC----T--T----CC------SCHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCHHHHHHHHhhcC----c--c----cC------CcHHHHHHHHHHHHhCC
Confidence 33332 4666777765321 1 2 22 57888888888776653
No 35
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=22.10 E-value=39 Score=33.12 Aligned_cols=85 Identities=13% Similarity=0.148 Sum_probs=44.5
Q ss_pred cccccceEEecCCCCCCCCchHHHHHhhCceeEEeecCcccccccccCCCCCCCceEEEeecCccccccccHHHHHcCC-
Q 012984 317 RPMLRATFCLQPPGDTPTRRSTFDGFLAGCIPVFFEEQSAKSQYVWHLPGEMYDEFSVFIPKEDVVFKGLKIVDVLMSI- 395 (452)
Q Consensus 317 ~~m~~S~FCL~P~Gd~~ssrrl~DAi~~GCIPVii~d~~~~~qy~w~LPfD~w~~fsV~I~e~dv~~~~~~l~~iL~~I- 395 (452)
+.|+.+...+...|. ..+.|||.+| +|||+.+... .|+..---.. .....+.++.+++... .|.+.|+.+
T Consensus 295 ~~l~~ad~~v~~~G~----~t~~Ea~~~G-~P~i~~p~~~-~q~~~a~~~~-~~g~g~~~~~~~~~~~--~l~~~i~~ll 365 (430)
T 2iyf_A 295 AILRQADLFVTHAGA----GGSQEGLATA-TPMIAVPQAV-DQFGNADMLQ-GLGVARKLATEEATAD--LLRETALALV 365 (430)
T ss_dssp HHHTTCSEEEECCCH----HHHHHHHHTT-CCEEECCCSH-HHHHHHHHHH-HTTSEEECCCC-CCHH--HHHHHHHHHH
T ss_pred HHhhccCEEEECCCc----cHHHHHHHhC-CCEEECCCcc-chHHHHHHHH-HcCCEEEcCCCCCCHH--HHHHHHHHHH
Confidence 678888876666553 3588999998 5888876421 1110000011 2345677776533111 344444333
Q ss_pred -CHHHHHHHHHHHHhh
Q 012984 396 -PNAKVRRMRERVIEL 410 (452)
Q Consensus 396 -~~~~i~~Mq~~l~~v 410 (452)
.++..++|++..+++
T Consensus 366 ~~~~~~~~~~~~~~~~ 381 (430)
T 2iyf_A 366 DDPEVARRLRRIQAEM 381 (430)
T ss_dssp HCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHH
Confidence 355455555554443
No 36
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=21.92 E-value=67 Score=30.76 Aligned_cols=79 Identities=14% Similarity=0.174 Sum_probs=46.0
Q ss_pred hcccccceEEecCCCCCCCCchHHHHHhhCceeEEeecC-cccccccccCCC-----CCCCceEEEeecCccccccccHH
Q 012984 316 MRPMLRATFCLQPPGDTPTRRSTFDGFLAGCIPVFFEEQ-SAKSQYVWHLPG-----EMYDEFSVFIPKEDVVFKGLKIV 389 (452)
Q Consensus 316 ~~~m~~S~FCL~P~Gd~~ssrrl~DAi~~GCIPVii~d~-~~~~qy~w~LPf-----D~w~~fsV~I~e~dv~~~~~~l~ 389 (452)
.+.|..+..++...|. -.+.||+.+|+ |+|+-.. . .+.+. . .....+.++.+++... .|.
T Consensus 292 ~~ll~~ad~~v~~~G~----~t~~Ea~~~G~-P~v~~p~~~------~~q~~~a~~~~-~~g~g~~~~~~~~~~~--~l~ 357 (402)
T 3ia7_A 292 HSVLAHARACLTHGTT----GAVLEAFAAGV-PLVLVPHFA------TEAAPSAERVI-ELGLGSVLRPDQLEPA--SIR 357 (402)
T ss_dssp HHHHTTEEEEEECCCH----HHHHHHHHTTC-CEEECGGGC------GGGHHHHHHHH-HTTSEEECCGGGCSHH--HHH
T ss_pred HHHHhhCCEEEECCCH----HHHHHHHHhCC-CEEEeCCCc------ccHHHHHHHHH-HcCCEEEccCCCCCHH--HHH
Confidence 4889999998888774 23689999995 9887654 2 13332 2 3456777776543211 344
Q ss_pred HHHcCC--CHHHHHHHHHHHH
Q 012984 390 DVLMSI--PNAKVRRMRERVI 408 (452)
Q Consensus 390 ~iL~~I--~~~~i~~Mq~~l~ 408 (452)
+.|+.+ .++...+|++.-.
T Consensus 358 ~~~~~ll~~~~~~~~~~~~~~ 378 (402)
T 3ia7_A 358 EAVERLAADSAVRERVRRMQR 378 (402)
T ss_dssp HHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHcCHHHHHHHHHHHH
Confidence 444333 2444444544443
No 37
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=20.97 E-value=42 Score=33.14 Aligned_cols=41 Identities=15% Similarity=0.155 Sum_probs=32.1
Q ss_pred chhhcccccceEEecCCCCCCCCchHHHHH-------hhCceeEEeecC
Q 012984 313 IRFMRPMLRATFCLQPPGDTPTRRSTFDGF-------LAGCIPVFFEEQ 354 (452)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~ssrrl~DAi-------~~GCIPVii~d~ 354 (452)
.+..+.|+.+..++.|.-.......+.||| ++|+ |||.++.
T Consensus 276 ~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~-PVIas~~ 323 (406)
T 2hy7_A 276 AQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGL-PAVCPNA 323 (406)
T ss_dssp HHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTC-CEEEEGG
T ss_pred HHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCC-cEEEehh
Confidence 467788999999999865444445588999 9995 9999876
Done!