Query 012985
Match_columns 452
No_of_seqs 233 out of 1466
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 08:21:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012985.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012985hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 9E-110 2E-114 862.0 34.4 379 71-451 24-431 (454)
2 PLN02209 serine carboxypeptida 100.0 1.7E-92 3.7E-97 737.9 37.6 370 72-451 20-419 (437)
3 PLN03016 sinapoylglucose-malat 100.0 2.4E-92 5.3E-97 736.5 36.5 367 73-451 19-415 (433)
4 PF00450 Peptidase_S10: Serine 100.0 2.6E-91 5.7E-96 723.1 27.3 366 81-451 1-399 (415)
5 PTZ00472 serine carboxypeptida 100.0 2.3E-85 5E-90 690.7 35.0 349 85-451 41-442 (462)
6 PLN02213 sinapoylglucose-malat 100.0 3.9E-65 8.5E-70 514.5 27.5 276 165-451 1-301 (319)
7 COG2939 Carboxypeptidase C (ca 100.0 6.7E-59 1.5E-63 478.5 20.7 345 88-450 73-473 (498)
8 KOG1283 Serine carboxypeptidas 100.0 1.8E-57 3.8E-62 441.0 17.6 351 91-450 3-396 (414)
9 TIGR03611 RutD pyrimidine util 98.2 5.4E-06 1.2E-10 78.2 9.7 116 107-262 2-117 (257)
10 TIGR01250 pro_imino_pep_2 prol 98.2 5.6E-06 1.2E-10 79.2 9.8 131 91-261 2-132 (288)
11 PRK00870 haloalkane dehalogena 98.2 3.3E-05 7.2E-10 76.8 13.9 141 73-259 7-149 (302)
12 PHA02857 monoglyceride lipase; 98.1 2.4E-05 5.1E-10 76.4 10.8 124 102-261 9-133 (276)
13 TIGR03056 bchO_mg_che_rel puta 98.0 3.7E-05 8.1E-10 74.1 11.3 110 116-263 24-133 (278)
14 PLN02824 hydrolase, alpha/beta 97.9 9.9E-05 2.1E-09 72.9 11.5 123 95-260 12-137 (294)
15 TIGR01249 pro_imino_pep_1 prol 97.9 0.00011 2.3E-09 73.6 11.1 126 93-261 6-131 (306)
16 PRK10673 acyl-CoA esterase; Pr 97.9 8.2E-05 1.8E-09 71.2 9.7 104 115-258 11-114 (255)
17 PLN02298 hydrolase, alpha/beta 97.7 0.00029 6.3E-09 71.0 11.6 137 92-261 33-170 (330)
18 PLN02385 hydrolase; alpha/beta 97.7 0.0003 6.4E-09 71.8 11.7 128 102-261 70-198 (349)
19 PF12697 Abhydrolase_6: Alpha/ 97.6 0.00014 3.1E-09 66.3 6.9 103 123-262 1-103 (228)
20 PF10340 DUF2424: Protein of u 97.6 0.00026 5.6E-09 73.0 9.1 133 105-264 105-239 (374)
21 PRK03204 haloalkane dehalogena 97.6 0.00072 1.6E-08 67.1 11.6 121 93-260 16-136 (286)
22 TIGR02240 PHA_depoly_arom poly 97.5 0.00054 1.2E-08 67.1 10.4 117 103-261 11-127 (276)
23 TIGR03695 menH_SHCHC 2-succiny 97.5 0.00033 7.1E-09 64.9 8.3 105 120-260 1-105 (251)
24 PRK03592 haloalkane dehalogena 97.5 0.00057 1.2E-08 67.5 10.3 115 103-262 16-130 (295)
25 PLN02652 hydrolase; alpha/beta 97.5 0.00095 2E-08 69.9 12.1 129 101-261 118-246 (395)
26 PRK11126 2-succinyl-6-hydroxy- 97.5 0.00036 7.8E-09 66.3 8.2 100 120-259 2-101 (242)
27 COG1506 DAP2 Dipeptidyl aminop 97.4 0.00052 1.1E-08 75.9 9.6 141 95-263 367-510 (620)
28 PRK05077 frsA fermentation/res 97.4 0.0012 2.5E-08 69.6 11.0 122 103-261 178-301 (414)
29 PLN02894 hydrolase, alpha/beta 97.3 0.002 4.3E-08 67.5 12.2 119 105-260 93-211 (402)
30 PLN02679 hydrolase, alpha/beta 97.2 0.0022 4.7E-08 66.0 10.6 104 119-259 87-190 (360)
31 TIGR02427 protocat_pcaD 3-oxoa 97.2 0.0022 4.7E-08 59.6 9.6 102 118-258 11-112 (251)
32 TIGR03343 biphenyl_bphD 2-hydr 97.2 0.0024 5.1E-08 62.1 9.9 106 119-258 29-134 (282)
33 PLN03084 alpha/beta hydrolase 97.2 0.0032 6.8E-08 65.7 11.3 131 89-260 102-232 (383)
34 TIGR01840 esterase_phb esteras 97.1 0.0023 5E-08 60.6 9.2 116 117-259 10-129 (212)
35 PLN02211 methyl indole-3-aceta 97.1 0.0024 5.2E-08 63.1 9.5 106 118-259 16-121 (273)
36 KOG4178 Soluble epoxide hydrol 97.1 0.0057 1.2E-07 61.7 12.1 140 89-266 20-159 (322)
37 PRK10349 carboxylesterase BioH 97.1 0.002 4.4E-08 62.0 8.2 94 121-258 14-107 (256)
38 PRK10749 lysophospholipase L2; 97.0 0.0042 9E-08 62.9 10.3 127 102-261 39-167 (330)
39 PRK14875 acetoin dehydrogenase 97.0 0.0048 1E-07 62.6 10.6 104 117-259 128-231 (371)
40 TIGR01738 bioH putative pimelo 96.9 0.0024 5.1E-08 59.3 7.2 96 120-259 4-99 (245)
41 PLN03087 BODYGUARD 1 domain co 96.9 0.0061 1.3E-07 65.4 10.8 134 88-258 173-307 (481)
42 PLN02965 Probable pheophorbida 96.9 0.0041 9E-08 60.1 8.4 101 123-259 6-106 (255)
43 PLN02578 hydrolase 96.9 0.0058 1.3E-07 62.6 9.8 112 103-259 75-186 (354)
44 TIGR02821 fghA_ester_D S-formy 96.8 0.029 6.2E-07 55.4 13.6 52 202-262 123-175 (275)
45 KOG4409 Predicted hydrolase/ac 96.7 0.011 2.3E-07 60.3 10.1 132 93-263 67-198 (365)
46 TIGR03101 hydr2_PEP hydrolase, 96.7 0.014 2.9E-07 58.0 10.6 125 103-263 9-137 (266)
47 PRK06489 hypothetical protein; 96.7 0.0087 1.9E-07 61.4 9.5 141 89-259 39-188 (360)
48 TIGR01607 PST-A Plasmodium sub 96.7 0.013 2.8E-07 59.7 10.7 153 102-261 6-186 (332)
49 PRK08775 homoserine O-acetyltr 96.7 0.0084 1.8E-07 61.0 9.3 75 164-260 98-173 (343)
50 COG0596 MhpC Predicted hydrola 96.6 0.011 2.4E-07 54.0 8.7 104 120-261 21-124 (282)
51 PLN02442 S-formylglutathione h 96.5 0.035 7.6E-07 55.2 12.2 56 197-263 126-181 (283)
52 PRK05855 short chain dehydroge 96.5 0.014 3E-07 62.9 9.9 100 103-234 12-111 (582)
53 PRK10566 esterase; Provisional 96.4 0.016 3.4E-07 55.5 8.9 108 107-237 14-127 (249)
54 PLN02511 hydrolase 96.3 0.018 4E-07 59.9 9.2 114 95-235 75-191 (388)
55 KOG2564 Predicted acetyltransf 96.3 0.011 2.4E-07 58.6 6.8 108 118-257 72-179 (343)
56 cd00707 Pancreat_lipase_like P 96.2 0.0069 1.5E-07 60.2 5.4 113 117-259 33-146 (275)
57 PLN02980 2-oxoglutarate decarb 96.2 0.038 8.3E-07 67.7 12.4 107 117-259 1368-1479(1655)
58 COG3509 LpqC Poly(3-hydroxybut 96.0 0.056 1.2E-06 54.0 10.7 126 102-260 43-179 (312)
59 PRK00175 metX homoserine O-ace 96.0 0.05 1.1E-06 56.4 11.0 133 103-260 32-182 (379)
60 TIGR03230 lipo_lipase lipoprot 95.8 0.034 7.4E-07 59.0 8.4 80 165-258 73-152 (442)
61 KOG1515 Arylacetamide deacetyl 95.7 0.096 2.1E-06 53.7 11.2 145 92-263 62-210 (336)
62 PF00561 Abhydrolase_1: alpha/ 95.6 0.03 6.4E-07 51.8 6.4 79 166-260 1-79 (230)
63 TIGR03100 hydr1_PEP hydrolase, 95.6 0.078 1.7E-06 52.3 9.7 79 165-261 57-135 (274)
64 PRK07581 hypothetical protein; 95.5 0.11 2.3E-06 52.6 10.7 129 103-259 25-158 (339)
65 KOG1455 Lysophospholipase [Lip 95.4 0.12 2.6E-06 51.9 10.3 114 102-237 36-149 (313)
66 TIGR00976 /NonD putative hydro 95.3 0.063 1.4E-06 58.5 8.7 130 102-263 5-135 (550)
67 PRK10985 putative hydrolase; P 95.2 0.14 3.1E-06 51.6 10.6 109 103-236 41-150 (324)
68 PLN00021 chlorophyllase 95.1 0.058 1.3E-06 54.7 7.3 116 117-262 49-168 (313)
69 COG2267 PldB Lysophospholipase 95.1 0.24 5.1E-06 49.9 11.5 138 90-263 8-145 (298)
70 PRK10162 acetyl esterase; Prov 94.9 0.11 2.3E-06 52.6 8.5 63 197-262 135-197 (318)
71 PRK10115 protease 2; Provision 94.6 0.07 1.5E-06 59.9 6.9 142 95-264 418-563 (686)
72 KOG1454 Predicted hydrolase/ac 94.5 0.17 3.6E-06 51.7 8.8 96 118-241 56-152 (326)
73 KOG2100 Dipeptidyl aminopeptid 94.4 0.13 2.9E-06 58.2 8.7 137 103-263 507-647 (755)
74 PF00326 Peptidase_S9: Prolyl 94.4 0.029 6.3E-07 52.7 3.0 92 164-265 13-104 (213)
75 PF06500 DUF1100: Alpha/beta h 93.9 0.05 1.1E-06 57.0 3.6 83 164-263 217-299 (411)
76 PF00975 Thioesterase: Thioest 93.5 0.28 6.2E-06 46.2 7.8 101 122-259 2-103 (229)
77 PF12695 Abhydrolase_5: Alpha/ 92.8 0.3 6.5E-06 42.1 6.3 94 122-259 1-94 (145)
78 PF10230 DUF2305: Uncharacteri 92.8 0.76 1.6E-05 45.5 9.8 241 120-423 2-248 (266)
79 PF10503 Esterase_phd: Esteras 92.6 0.52 1.1E-05 45.5 8.1 50 202-259 82-131 (220)
80 KOG4391 Predicted alpha/beta h 91.5 0.55 1.2E-05 45.3 6.6 122 104-262 65-186 (300)
81 PRK11460 putative hydrolase; P 90.8 1.1 2.4E-05 43.2 8.3 36 200-236 87-122 (232)
82 PRK11071 esterase YqiA; Provis 90.5 1.1 2.4E-05 41.9 7.8 78 121-237 2-81 (190)
83 cd00312 Esterase_lipase Estera 90.4 1.4 3E-05 47.1 9.4 39 196-235 156-194 (493)
84 PF07859 Abhydrolase_3: alpha/ 89.8 0.51 1.1E-05 43.9 4.9 63 195-262 47-112 (211)
85 COG0657 Aes Esterase/lipase [L 89.8 3.2 6.8E-05 41.5 11.0 46 215-264 150-195 (312)
86 TIGR01392 homoserO_Ac_trn homo 89.0 4.4 9.5E-05 41.2 11.5 133 103-260 15-162 (351)
87 PF05990 DUF900: Alpha/beta hy 88.5 0.65 1.4E-05 45.1 4.7 72 192-263 67-140 (233)
88 PLN02454 triacylglycerol lipas 87.6 1.3 2.9E-05 46.6 6.6 68 194-262 206-273 (414)
89 KOG1838 Alpha/beta hydrolase [ 87.3 3.7 8E-05 43.1 9.6 131 95-260 97-236 (409)
90 PLN02872 triacylglycerol lipas 86.4 2.6 5.6E-05 44.3 8.0 96 118-231 72-174 (395)
91 PRK05371 x-prolyl-dipeptidyl a 86.3 1.8 3.8E-05 49.4 7.2 89 159-262 273-375 (767)
92 PF02129 Peptidase_S15: X-Pro 86.3 1.3 2.7E-05 43.6 5.4 83 166-264 58-140 (272)
93 PF01764 Lipase_3: Lipase (cla 86.0 1.6 3.4E-05 37.9 5.3 62 196-261 46-107 (140)
94 COG4099 Predicted peptidase [G 85.0 14 0.0003 37.5 11.8 114 101-240 169-292 (387)
95 KOG3975 Uncharacterized conser 83.1 4.2 9.1E-05 40.1 7.1 102 117-242 26-131 (301)
96 PRK13604 luxD acyl transferase 82.8 13 0.00028 37.8 10.9 124 102-261 18-142 (307)
97 PF07519 Tannase: Tannase and 82.7 33 0.00072 36.9 14.7 86 196-293 98-192 (474)
98 cd00741 Lipase Lipase. Lipase 81.3 2.6 5.6E-05 37.5 4.8 43 196-241 10-52 (153)
99 PF06342 DUF1057: Alpha/beta h 79.8 23 0.0005 35.7 11.1 105 117-259 32-136 (297)
100 PF11288 DUF3089: Protein of u 79.5 2.7 5.9E-05 40.2 4.5 44 195-240 75-118 (207)
101 cd00519 Lipase_3 Lipase (class 79.3 4.1 8.9E-05 38.8 5.8 58 198-261 112-169 (229)
102 PF02230 Abhydrolase_2: Phosph 79.0 2.5 5.4E-05 39.9 4.1 74 196-279 86-165 (216)
103 PF11144 DUF2920: Protein of u 78.5 3.5 7.5E-05 43.3 5.3 61 195-263 161-222 (403)
104 PRK10252 entF enterobactin syn 78.4 12 0.00026 44.7 10.6 102 120-258 1068-1169(1296)
105 PF00151 Lipase: Lipase; Inte 76.6 0.63 1.4E-05 47.7 -0.8 71 164-240 103-173 (331)
106 KOG2183 Prolylcarboxypeptidase 76.3 9.4 0.0002 40.3 7.5 61 165-229 111-179 (492)
107 PLN02571 triacylglycerol lipas 75.3 7.2 0.00016 41.2 6.6 67 195-262 205-277 (413)
108 COG0400 Predicted esterase [Ge 75.2 11 0.00023 36.1 7.2 150 106-280 5-157 (207)
109 PF05728 UPF0227: Uncharacteri 73.9 3.6 7.7E-05 38.7 3.6 52 201-266 46-97 (187)
110 PLN02733 phosphatidylcholine-s 73.1 7.5 0.00016 41.5 6.2 40 194-236 142-181 (440)
111 TIGR03502 lipase_Pla1_cef extr 72.9 14 0.0003 42.3 8.5 45 192-236 521-574 (792)
112 PF05677 DUF818: Chlamydia CHL 71.4 9 0.0002 39.5 6.0 61 164-233 170-231 (365)
113 PF05577 Peptidase_S28: Serine 69.3 7 0.00015 41.1 5.0 73 191-271 87-159 (434)
114 KOG4627 Kynurenine formamidase 69.3 5.8 0.00013 38.2 3.8 73 175-261 101-173 (270)
115 PLN02753 triacylglycerol lipas 68.2 13 0.00027 40.5 6.6 71 192-262 285-361 (531)
116 PF07819 PGAP1: PGAP1-like pro 67.9 28 0.00062 33.4 8.5 35 195-229 61-97 (225)
117 PLN02719 triacylglycerol lipas 67.3 13 0.00029 40.2 6.5 69 194-262 273-347 (518)
118 PF05448 AXE1: Acetyl xylan es 66.1 24 0.00052 35.9 7.9 145 102-262 65-211 (320)
119 KOG3101 Esterase D [General fu 65.8 58 0.0013 31.6 9.7 152 89-264 7-180 (283)
120 smart00824 PKS_TE Thioesterase 64.0 29 0.00062 31.1 7.4 76 165-258 25-100 (212)
121 PF03283 PAE: Pectinacetyleste 63.7 64 0.0014 33.5 10.6 150 103-261 34-198 (361)
122 PRK04940 hypothetical protein; 63.1 11 0.00024 35.4 4.3 40 217-267 60-99 (180)
123 PRK10439 enterobactin/ferric e 61.7 81 0.0017 33.3 11.1 35 217-259 288-322 (411)
124 PRK06765 homoserine O-acetyltr 61.0 12 0.00026 39.2 4.8 49 394-450 321-370 (389)
125 PF06057 VirJ: Bacterial virul 61.0 13 0.00028 35.2 4.4 105 120-259 2-106 (192)
126 PLN03082 Iron-sulfur cluster a 60.6 5.4 0.00012 36.8 1.8 65 118-183 76-147 (163)
127 PF08237 PE-PPE: PE-PPE domain 59.7 29 0.00063 33.5 6.9 87 166-259 3-89 (225)
128 PRK14566 triosephosphate isome 58.7 20 0.00043 35.6 5.5 62 193-263 187-248 (260)
129 PRK14567 triosephosphate isome 58.2 22 0.00047 35.2 5.7 61 194-263 178-238 (253)
130 PLN02761 lipase class 3 family 57.9 24 0.00052 38.3 6.4 69 194-262 268-344 (527)
131 TIGR01836 PHA_synth_III_C poly 55.5 23 0.00049 36.0 5.6 28 396-423 286-313 (350)
132 PF08386 Abhydrolase_4: TAP-li 55.4 23 0.0005 29.6 4.7 41 397-449 35-75 (103)
133 PLN02408 phospholipase A1 54.8 31 0.00066 36.0 6.4 64 195-261 179-242 (365)
134 PF10081 Abhydrolase_9: Alpha/ 54.7 27 0.00059 35.1 5.7 35 194-228 86-120 (289)
135 PF06259 Abhydrolase_8: Alpha/ 54.0 27 0.00059 32.6 5.4 67 164-237 62-129 (177)
136 COG0429 Predicted hydrolase of 53.9 1.9E+02 0.0041 29.9 11.7 123 104-259 61-185 (345)
137 COG2272 PnbA Carboxylesterase 53.6 96 0.0021 33.6 9.9 33 201-234 165-197 (491)
138 COG2945 Predicted hydrolase of 52.9 14 0.00031 35.1 3.3 59 175-241 69-127 (210)
139 KOG2182 Hydrolytic enzymes of 52.6 43 0.00092 36.2 7.1 65 166-235 119-190 (514)
140 COG3319 Thioesterase domains o 52.5 66 0.0014 31.9 8.1 89 121-242 1-90 (257)
141 KOG2281 Dipeptidyl aminopeptid 52.4 50 0.0011 37.0 7.6 127 104-264 623-766 (867)
142 KOG1552 Predicted alpha/beta h 51.8 43 0.00094 33.1 6.6 111 117-264 57-167 (258)
143 PLN02802 triacylglycerol lipas 50.8 32 0.0007 37.3 5.9 65 195-262 309-373 (509)
144 PLN02847 triacylglycerol lipas 50.7 27 0.00058 38.7 5.4 62 190-257 223-288 (633)
145 PLN02324 triacylglycerol lipas 50.6 38 0.00083 35.9 6.4 68 194-262 193-267 (415)
146 TIGR01911 HesB_rel_seleno HesB 50.5 14 0.0003 30.7 2.5 58 122-180 28-90 (92)
147 PLN02934 triacylglycerol lipas 49.4 40 0.00086 36.6 6.3 41 198-241 305-345 (515)
148 KOG4569 Predicted lipase [Lipi 48.9 35 0.00075 35.0 5.7 61 198-262 155-215 (336)
149 PF11187 DUF2974: Protein of u 48.0 36 0.00078 32.9 5.4 39 198-240 69-107 (224)
150 PHA02857 monoglyceride lipase; 47.5 37 0.0008 32.6 5.5 47 394-451 207-253 (276)
151 TIGR03343 biphenyl_bphD 2-hydr 46.5 45 0.00099 31.9 5.9 46 394-451 221-266 (282)
152 PLN00413 triacylglycerol lipas 46.1 24 0.00052 38.0 4.1 40 199-241 269-308 (479)
153 PF05057 DUF676: Putative seri 46.0 30 0.00064 32.9 4.4 49 192-241 54-102 (217)
154 PF12146 Hydrolase_4: Putative 45.9 1.1E+02 0.0024 24.3 7.1 79 103-205 1-79 (79)
155 COG0400 Predicted esterase [Ge 44.8 18 0.00039 34.6 2.7 45 395-439 145-189 (207)
156 PLN02310 triacylglycerol lipas 44.4 46 0.001 35.2 5.8 64 195-261 186-250 (405)
157 COG4425 Predicted membrane pro 44.0 49 0.0011 35.4 5.8 35 194-228 374-408 (588)
158 KOG3079 Uridylate kinase/adeny 43.3 13 0.00029 35.0 1.5 16 118-133 5-20 (195)
159 PF12740 Chlorophyllase2: Chlo 42.9 1.4E+02 0.0031 29.6 8.7 66 192-260 62-131 (259)
160 PLN02561 triosephosphate isome 42.9 50 0.0011 32.6 5.5 60 194-262 179-239 (253)
161 PRK09504 sufA iron-sulfur clus 42.6 21 0.00046 31.0 2.6 65 119-184 38-108 (122)
162 PLN02298 hydrolase, alpha/beta 42.2 35 0.00076 34.0 4.5 30 395-424 250-279 (330)
163 PRK11190 Fe/S biogenesis prote 41.9 62 0.0014 30.6 5.8 64 121-185 24-95 (192)
164 PF12695 Abhydrolase_5: Alpha/ 41.9 26 0.00056 29.7 3.0 33 391-423 99-131 (145)
165 PLN02429 triosephosphate isome 41.7 50 0.0011 33.7 5.4 61 194-263 238-299 (315)
166 PLN02162 triacylglycerol lipas 41.3 38 0.00082 36.4 4.7 41 198-241 262-302 (475)
167 PLN03037 lipase class 3 family 40.5 59 0.0013 35.5 6.0 64 196-261 296-360 (525)
168 PRK07868 acyl-CoA synthetase; 39.6 69 0.0015 37.7 7.0 40 216-262 140-179 (994)
169 PF03959 FSH1: Serine hydrolas 39.4 26 0.00056 33.1 2.9 127 119-264 3-149 (212)
170 COG0627 Predicted esterase [Ge 39.1 1.2E+02 0.0025 31.1 7.7 129 119-263 52-190 (316)
171 KOG1553 Predicted alpha/beta h 39.1 60 0.0013 33.7 5.5 106 118-262 241-346 (517)
172 PRK09502 iscA iron-sulfur clus 38.9 28 0.00061 29.4 2.7 64 120-184 24-93 (107)
173 TIGR03611 RutD pyrimidine util 38.7 49 0.0011 30.5 4.6 42 396-449 198-239 (257)
174 TIGR01738 bioH putative pimelo 38.1 63 0.0014 29.3 5.2 44 395-450 187-230 (245)
175 COG4757 Predicted alpha/beta h 38.1 68 0.0015 31.6 5.4 124 165-294 57-196 (281)
176 TIGR01607 PST-A Plasmodium sub 37.6 50 0.0011 33.5 4.8 46 396-451 270-315 (332)
177 PRK10349 carboxylesterase BioH 37.6 59 0.0013 30.8 5.1 46 394-451 194-239 (256)
178 PRK10749 lysophospholipase L2; 37.4 31 0.00068 34.7 3.3 50 396-450 259-308 (330)
179 PF00681 Plectin: Plectin repe 36.6 32 0.00068 24.4 2.3 32 258-289 12-43 (45)
180 TIGR03056 bchO_mg_che_rel puta 36.1 55 0.0012 30.9 4.6 43 396-450 220-262 (278)
181 PF01083 Cutinase: Cutinase; 35.8 72 0.0016 29.5 5.2 85 166-263 40-126 (179)
182 TIGR02427 protocat_pcaD 3-oxoa 35.8 77 0.0017 28.7 5.5 30 394-423 191-220 (251)
183 PF00326 Peptidase_S9: Prolyl 34.4 36 0.00078 31.5 3.0 33 395-427 143-175 (213)
184 PF07849 DUF1641: Protein of u 34.3 15 0.00032 26.0 0.2 18 348-365 14-31 (42)
185 COG4782 Uncharacterized protei 34.2 61 0.0013 33.7 4.7 120 117-263 113-237 (377)
186 TIGR01249 pro_imino_pep_1 prol 33.5 93 0.002 30.7 5.9 43 396-450 248-290 (306)
187 PTZ00333 triosephosphate isome 33.0 87 0.0019 31.0 5.5 61 193-262 181-242 (255)
188 PF15253 STIL_N: SCL-interrupt 32.8 47 0.001 35.1 3.7 37 89-128 198-235 (410)
189 PF08840 BAAT_C: BAAT / Acyl-C 32.6 31 0.00066 32.8 2.2 35 205-239 10-44 (213)
190 PRK15492 triosephosphate isome 32.4 1E+02 0.0022 30.6 5.9 60 194-263 188-248 (260)
191 PF03583 LIP: Secretory lipase 32.1 1.1E+02 0.0025 30.4 6.3 67 194-263 45-116 (290)
192 TIGR03341 YhgI_GntY IscR-regul 32.1 86 0.0019 29.6 5.1 64 121-185 23-94 (190)
193 PLN03087 BODYGUARD 1 domain co 31.5 95 0.0021 33.6 5.9 50 389-450 410-460 (481)
194 PF07389 DUF1500: Protein of u 31.5 36 0.00078 28.1 2.0 36 198-241 7-42 (100)
195 cd00311 TIM Triosephosphate is 31.3 1.1E+02 0.0024 29.9 5.9 59 194-262 175-234 (242)
196 PRK03204 haloalkane dehalogena 30.9 60 0.0013 31.8 4.0 45 396-451 227-271 (286)
197 PF15128 T_cell_tran_alt: T-ce 30.5 37 0.0008 27.8 1.9 25 1-25 23-47 (92)
198 COG2819 Predicted hydrolase of 30.4 4.2E+02 0.0091 26.4 9.7 36 197-233 113-153 (264)
199 COG3896 Chloramphenicol 3-O-ph 30.0 38 0.00081 31.5 2.1 28 119-147 21-52 (205)
200 PF12697 Abhydrolase_6: Alpha/ 29.4 92 0.002 27.5 4.7 45 394-450 174-218 (228)
201 TIGR02011 IscA iron-sulfur clu 29.0 44 0.00095 28.1 2.3 65 119-184 21-91 (105)
202 PRK14565 triosephosphate isome 28.6 1E+02 0.0022 30.2 5.1 55 192-263 171-225 (237)
203 PF04414 tRNA_deacylase: D-ami 28.5 1.4E+02 0.0029 28.9 5.8 47 192-241 105-152 (213)
204 PRK00042 tpiA triosephosphate 27.3 1.5E+02 0.0032 29.2 6.0 60 194-263 179-239 (250)
205 PF00756 Esterase: Putative es 27.2 49 0.0011 31.4 2.6 45 210-263 109-153 (251)
206 PLN02385 hydrolase; alpha/beta 27.0 91 0.002 31.5 4.7 29 396-424 279-307 (349)
207 KOG3967 Uncharacterized conser 26.6 98 0.0021 30.2 4.4 40 192-237 171-210 (297)
208 TIGR01838 PHA_synth_I poly(R)- 26.4 3.2E+02 0.0069 30.0 8.9 85 166-263 221-305 (532)
209 COG3208 GrsT Predicted thioest 26.4 75 0.0016 31.2 3.7 66 166-242 34-99 (244)
210 PLN02652 hydrolase; alpha/beta 25.9 95 0.0021 32.5 4.6 28 396-423 324-351 (395)
211 TIGR01840 esterase_phb esteras 25.3 46 0.001 31.0 2.0 29 397-425 169-197 (212)
212 KOG3724 Negative regulator of 25.0 96 0.0021 35.6 4.6 93 123-231 92-196 (973)
213 PF06309 Torsin: Torsin; Inte 24.7 58 0.0013 28.8 2.3 17 117-133 49-65 (127)
214 PRK13604 luxD acyl transferase 24.6 86 0.0019 31.9 3.9 35 389-423 195-229 (307)
215 TIGR01250 pro_imino_pep_2 prol 24.6 1.3E+02 0.0028 28.0 5.0 47 391-450 226-272 (288)
216 PF03583 LIP: Secretory lipase 24.4 61 0.0013 32.4 2.8 31 396-426 219-249 (290)
217 PRK00870 haloalkane dehalogena 24.3 1.1E+02 0.0023 30.0 4.5 52 390-451 233-284 (302)
218 PF10503 Esterase_phd: Esteras 23.2 69 0.0015 30.9 2.8 26 396-421 169-194 (220)
219 PRK03995 hypothetical protein; 23.1 1.5E+02 0.0032 29.6 5.1 47 192-241 157-203 (267)
220 PF06821 Ser_hydrolase: Serine 23.1 65 0.0014 29.6 2.5 39 216-261 54-92 (171)
221 KOG1516 Carboxylesterase and r 23.0 4E+02 0.0088 28.7 9.0 34 201-235 180-213 (545)
222 TIGR01997 sufA_proteo FeS asse 22.6 79 0.0017 26.6 2.7 64 120-184 24-93 (107)
223 PRK13962 bifunctional phosphog 22.2 1.4E+02 0.003 33.6 5.2 62 193-263 573-635 (645)
224 PF08538 DUF1749: Protein of u 22.0 2.5E+02 0.0055 28.6 6.6 71 192-265 82-153 (303)
225 PRK06762 hypothetical protein; 21.7 53 0.0012 29.3 1.6 13 121-133 2-14 (166)
226 PF09292 Neil1-DNA_bind: Endon 21.1 57 0.0012 22.6 1.2 12 120-131 24-35 (39)
227 PRK07581 hypothetical protein; 20.9 1.8E+02 0.0039 29.0 5.5 43 396-450 275-318 (339)
228 PRK13623 iron-sulfur cluster i 20.8 74 0.0016 27.2 2.2 62 122-184 34-101 (115)
229 cd01427 HAD_like Haloacid deha 20.8 1.9E+02 0.0042 23.4 4.8 39 381-424 25-63 (139)
230 COG0529 CysC Adenylylsulfate k 20.7 86 0.0019 29.7 2.7 24 117-141 19-44 (197)
231 PF03403 PAF-AH_p_II: Platelet 20.3 65 0.0014 33.6 2.1 38 218-264 229-266 (379)
232 PRK08775 homoserine O-acetyltr 20.0 1.2E+02 0.0025 30.6 3.9 44 396-450 277-321 (343)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=9.3e-110 Score=862.05 Aligned_cols=379 Identities=49% Similarity=0.891 Sum_probs=346.8
Q ss_pred CccCCccccCCCCCCCCCceeEeeEEEecCCCCceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcC
Q 012985 71 MMEADKIKTLPGQPEGVDFDQYAGYLTVDPKAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNS 150 (452)
Q Consensus 71 ~~~~d~v~~LPg~~~~~~~~~ysGyv~V~~~~~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~ 150 (452)
.+++|+|++|||++.+++|+||||||+|+++.+++||||||||+.+|+++||||||||||||||++ |+|.|+|||+|+.
T Consensus 24 ~~~~~~I~~LPG~~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~ 102 (454)
T KOG1282|consen 24 VDEADLIKSLPGQPGPLPFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKY 102 (454)
T ss_pred cchhhhhhcCCCCCCCCCcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcC
Confidence 567799999999998899999999999999999999999999999999999999999999999997 9999999999999
Q ss_pred CCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccc
Q 012985 151 DGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHY 230 (452)
Q Consensus 151 ~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~y 230 (452)
+|++|+.|||||||.||||||||||||||||+++++++. .+|+.+|+|++.||++||++||||++|||||+||||||||
T Consensus 103 ~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~-~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~Y 181 (454)
T KOG1282|consen 103 NGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYK-TGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHY 181 (454)
T ss_pred CCCcceeCCccccccccEEEEecCCcCCccccCCCCcCc-CCcHHHHHHHHHHHHHHHHhChhhcCCCeEEeccccccee
Confidence 999999999999999999999999999999999999887 5999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHcCC--CCceeeeeeeEEecccccccccccchhhhhhccCCCCHHHHHHHHHhhhhcC------CCCchhH
Q 012985 231 VPQLAYTILSKNT--SKTIINLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINKYCDFAT------GQLSTSC 302 (452)
Q Consensus 231 vP~lA~~I~~~n~--~~~~inLkGI~IGNg~id~~~~~~~~~~y~~~~glIs~~~~~~i~~~C~~~~------~~~~~~C 302 (452)
||+||+.|++.|. ..+.|||||++||||++|+..|..++.+|+|.||+||+++++.+++.|++.. ...+..|
T Consensus 182 VP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~~~~~C 261 (454)
T KOG1282|consen 182 VPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVDPSNTKC 261 (454)
T ss_pred hHHHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccCCchhHH
Confidence 9999999999993 4678999999999999999999999999999999999999999999998732 1336789
Q ss_pred HHHHHHHH-HHhCCCcccccccccCCCCCCCCCCCCCccccCCCchhHHhhhcCcHHHHhhccCCccC---cccCCCCc-
Q 012985 303 DQYQTQGV-REYGQIDLYNVYAPLCKSSAPPPPTAGVIREYDPCSDKYVNSYLNLAEVQAALHAKHTN---WSTCSDLT- 377 (452)
Q Consensus 303 ~~a~~~~~-~~~g~in~YnI~~~~C~~~~~~~~~~~~~~~~dpc~~~~~~~YLN~~dVq~ALhv~~~~---w~~Cs~~v- 377 (452)
.++++.+. ...+++|.|+|+.+.|...............+++|.+.+.+.|||+++||+||||+... |+.||+.|
T Consensus 262 ~~~~~~~~~~~~~~i~~y~i~~~~C~~~~~~~~~~~~~~~~~~c~~~~~~~ylN~~~VrkALh~~~~~~~~W~~Cn~~v~ 341 (454)
T KOG1282|consen 262 NKAVEEFDSKTTGDIDNYYILTPDCYPTSYELKKPTDCYGYDPCLSDYAEKYLNRPEVRKALHANKTSIGKWERCNDEVN 341 (454)
T ss_pred HHHHHHHHHHHhccCchhhhcchhhccccccccccccccccCCchhhhHHHhcCCHHHHHHhCCCCCCCCcccccChhhh
Confidence 99999888 55679999999999998621110111124567899988889999999999999998864 99999999
Q ss_pred --ccCCCCChHHHHHHHHHcC-CeEEEEecCCCcccCchhHHHHHHhCCCCCCcceeceEeC-Ce------------EEE
Q 012985 378 --WTDSPSTVLPTIQQLIASG-IRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYAD-GW------------WIC 441 (452)
Q Consensus 378 --~~d~~~s~lp~i~~LL~~g-irVlIYsGD~D~i~p~~Gt~~wi~~L~w~~~~~w~pW~~~-g~------------~~~ 441 (452)
|.+...+|+|.+++++.++ +||||||||.|++||++||++||++|+++.+++||||+++ ++ +++
T Consensus 342 ~~~~~~~~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~t 421 (454)
T KOG1282|consen 342 YNYNDDIKSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFAT 421 (454)
T ss_pred cccccCccchHHHHHHHhhcCceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEE
Confidence 6799999999999999966 9999999999999999999999999999999999999985 32 589
Q ss_pred EEecCccccC
Q 012985 442 ARVQGSDIHH 451 (452)
Q Consensus 442 ~~~~g~~~~~ 451 (452)
+||+||||+.
T Consensus 422 VrGaGH~VP~ 431 (454)
T KOG1282|consen 422 VRGAGHMVPY 431 (454)
T ss_pred EeCCcccCCC
Confidence 9999999985
No 2
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=1.7e-92 Score=737.94 Aligned_cols=370 Identities=27% Similarity=0.513 Sum_probs=319.7
Q ss_pred ccCCccccCCCCCCCCCceeEeeEEEecCCCCceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCC
Q 012985 72 MEADKIKTLPGQPEGVDFDQYAGYLTVDPKAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSD 151 (452)
Q Consensus 72 ~~~d~v~~LPg~~~~~~~~~ysGyv~V~~~~~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~ 151 (452)
++.|+|++|||++.++++++|||||+|+++.+++||||||||+.+|+++||+|||||||||||+ +|+|.|+|||+++.+
T Consensus 20 ~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~-~g~f~e~GP~~~~~~ 98 (437)
T PLN02209 20 RSGSIVKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCL-SGLFFENGPLALKNK 98 (437)
T ss_pred CccCeeecCCCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHh-hhHHHhcCCceeccC
Confidence 4568999999997789999999999999877899999999999999999999999999999999 699999999999876
Q ss_pred C-----CccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccc
Q 012985 152 G-----KTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESY 226 (452)
Q Consensus 152 ~-----~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESY 226 (452)
+ .++++||+||++.|||||||||+||||||+++...+. +++++|+++++||+.||++||+|+++||||+||||
T Consensus 99 ~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~--~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESY 176 (437)
T PLN02209 99 VYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERT--SDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSY 176 (437)
T ss_pred CCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCcc--CCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCc
Confidence 4 3789999999999999999999999999987765543 66778999999999999999999999999999999
Q ss_pred cccccHHHHHHHHHcC--CCCceeeeeeeEEecccccccccccchhhhhhccCCCCHHHHHHHHHhhhhcC---CCCchh
Q 012985 227 AGHYVPQLAYTILSKN--TSKTIINLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINKYCDFAT---GQLSTS 301 (452)
Q Consensus 227 gG~yvP~lA~~I~~~n--~~~~~inLkGI~IGNg~id~~~~~~~~~~y~~~~glIs~~~~~~i~~~C~~~~---~~~~~~ 301 (452)
||||||.+|++|+++| ..+++||||||+||||++||..|..++.+|++.||+|++++++.+++.|.... ...+..
T Consensus 177 aG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~~~~~~~~~ 256 (437)
T PLN02209 177 SGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYFSVDPSNKK 256 (437)
T ss_pred CceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhcccccccCCCChHH
Confidence 9999999999999987 24568999999999999999999999999999999999999999999996421 134568
Q ss_pred HHHHHHHHHHHhCCCcccccccccCCCCCCCCCCCCCccccCCCch---hHHhhhcCcHHHHhhccCCcc---CcccCCC
Q 012985 302 CDQYQTQGVREYGQIDLYNVYAPLCKSSAPPPPTAGVIREYDPCSD---KYVNSYLNLAEVQAALHAKHT---NWSTCSD 375 (452)
Q Consensus 302 C~~a~~~~~~~~g~in~YnI~~~~C~~~~~~~~~~~~~~~~dpc~~---~~~~~YLN~~dVq~ALhv~~~---~w~~Cs~ 375 (452)
|.+++..+....+.+|.|+++.+.|...... ....+|.. ..+..|||+++||+||||+.. .|..|+.
T Consensus 257 C~~~i~~~~~~~~~~~~~~~~~~~c~~~~~~-------~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~~~~ 329 (437)
T PLN02209 257 CLKLVEEYHKCTDNINSHHTLIANCDDSNTQ-------HISPDCYYYPYHLVECWANNESVREALHVDKGSIGEWIRDHR 329 (437)
T ss_pred HHHHHHHHHHHhhcCCccccccccccccccc-------cCCCCcccccHHHHHHHhCCHHHHHHhCCCCCCCCCCccccc
Confidence 9988887666667889998766678543211 12235643 367899999999999999853 3999988
Q ss_pred Cc-ccCCCCChHHHHHHHHHcCCeEEEEecCCCcccCchhHHHHHHhCCCCCCcceeceEeCCe-------------EEE
Q 012985 376 LT-WTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGW-------------WIC 441 (452)
Q Consensus 376 ~v-~~d~~~s~lp~i~~LL~~girVlIYsGD~D~i~p~~Gt~~wi~~L~w~~~~~w~pW~~~g~-------------~~~ 441 (452)
.+ +.+...++++.+.++|.+|+|||||+||.|++||++||++|+++|+|+++++|+||+.+++ +++
T Consensus 330 ~~~~~~d~~~~~~~~~~~l~~girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~ 409 (437)
T PLN02209 330 GIPYKSDIRSSIPYHMNNSINGYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFAT 409 (437)
T ss_pred hhhcccchhhhHHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEE
Confidence 76 5433445566666677789999999999999999999999999999999999999986652 678
Q ss_pred EEecCccccC
Q 012985 442 ARVQGSDIHH 451 (452)
Q Consensus 442 ~~~~g~~~~~ 451 (452)
+|++||||++
T Consensus 410 V~~AGHmVp~ 419 (437)
T PLN02209 410 VKGGGHTAEY 419 (437)
T ss_pred EcCCCCCcCc
Confidence 8999999964
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=2.4e-92 Score=736.48 Aligned_cols=367 Identities=29% Similarity=0.567 Sum_probs=320.0
Q ss_pred cCCccccCCCCCCCCCceeEeeEEEecCCCCceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCC-
Q 012985 73 EADKIKTLPGQPEGVDFDQYAGYLTVDPKAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSD- 151 (452)
Q Consensus 73 ~~d~v~~LPg~~~~~~~~~ysGyv~V~~~~~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~- 151 (452)
+.+.|++|||+...++|++|||||+|+++.+.+||||||||+.+|+++||+|||||||||||+ .|+|.|+|||+++.+
T Consensus 19 ~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~-~g~~~e~GP~~~~~~~ 97 (433)
T PLN03016 19 SASIVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCL-GGIIFENGPVGLKFEV 97 (433)
T ss_pred ccCeeecCcCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHH-HHHHHhcCCceeeccc
Confidence 348899999997778999999999999877899999999999999999999999999999999 699999999998743
Q ss_pred ----CCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEecccc
Q 012985 152 ----GKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYA 227 (452)
Q Consensus 152 ----~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYg 227 (452)
+.++++|++||++.|||||||||+||||||+++..++ .+|.++|++++.||+.||++||+|+++||||+|||||
T Consensus 98 ~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~--~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYa 175 (433)
T PLN03016 98 FNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDK--TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYS 175 (433)
T ss_pred cCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCc--cCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCcc
Confidence 3578999999999999999999999999999876654 3677788999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHcC--CCCceeeeeeeEEecccccccccccchhhhhhccCCCCHHHHHHHHHhhhhcC---CCCchhH
Q 012985 228 GHYVPQLAYTILSKN--TSKTIINLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINKYCDFAT---GQLSTSC 302 (452)
Q Consensus 228 G~yvP~lA~~I~~~n--~~~~~inLkGI~IGNg~id~~~~~~~~~~y~~~~glIs~~~~~~i~~~C~~~~---~~~~~~C 302 (452)
|||||.+|++|+++| ...++||||||+||||++||..|..++.+|+|.||+|++++++.+++.|+... ...+..|
T Consensus 176 G~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~~~~~~~~C 255 (433)
T PLN03016 176 GMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQC 255 (433)
T ss_pred ceehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccccccCCCchHHH
Confidence 999999999999988 24578999999999999999999999999999999999999999999997421 1346789
Q ss_pred HHHHHHHHHHhCCCcccccccccCCCCCCCCCCCCCccccCCCch---hHHhhhcCcHHHHhhccCCcc---CcccCCCC
Q 012985 303 DQYQTQGVREYGQIDLYNVYAPLCKSSAPPPPTAGVIREYDPCSD---KYVNSYLNLAEVQAALHAKHT---NWSTCSDL 376 (452)
Q Consensus 303 ~~a~~~~~~~~g~in~YnI~~~~C~~~~~~~~~~~~~~~~dpc~~---~~~~~YLN~~dVq~ALhv~~~---~w~~Cs~~ 376 (452)
..+++.+....+.+|+|||+.+.|..... ..++|.. ..++.|||+++||+||||+.. .|..|+..
T Consensus 256 ~~~~~~~~~~~~~~n~yni~~~~~~~~~~---------~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~cn~~ 326 (433)
T PLN03016 256 LKLTEEYHKCTAKINIHHILTPDCDVTNV---------TSPDCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNRT 326 (433)
T ss_pred HHHHHHHHHHhcCCChhhccCCccccccc---------CCCcccccchHHHHHHhCCHHHHHHhCCCCCCCCCCccCCcc
Confidence 99988877778899999999877743210 1135653 367899999999999999752 39999998
Q ss_pred c-ccCCCCChHHHHHHHHHcCCeEEEEecCCCcccCchhHHHHHHhCCCCCCcceeceEeCCe-------------EEEE
Q 012985 377 T-WTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGW-------------WICA 442 (452)
Q Consensus 377 v-~~d~~~s~lp~i~~LL~~girVlIYsGD~D~i~p~~Gt~~wi~~L~w~~~~~w~pW~~~g~-------------~~~~ 442 (452)
+ +.+...++++.+.+++.+|+|||||+||.|++||++||++|+++|+|+++++|+||+++++ ++.+
T Consensus 327 v~~~~d~~~~~~~~~~~l~~~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V 406 (433)
T PLN03016 327 IPYNHDIVSSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATI 406 (433)
T ss_pred cccccccchhhHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEE
Confidence 8 5433345667777777789999999999999999999999999999999999999986542 6788
Q ss_pred EecCccccC
Q 012985 443 RVQGSDIHH 451 (452)
Q Consensus 443 ~~~g~~~~~ 451 (452)
|++||||++
T Consensus 407 ~~AGHmVp~ 415 (433)
T PLN03016 407 KAGGHTAEY 415 (433)
T ss_pred cCCCCCCCC
Confidence 899999975
No 4
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=2.6e-91 Score=723.12 Aligned_cols=366 Identities=40% Similarity=0.749 Sum_probs=297.5
Q ss_pred CCCCCCCCceeEeeEEEecCCCCceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCC-CccccCC
Q 012985 81 PGQPEGVDFDQYAGYLTVDPKAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDG-KTLYRNE 159 (452)
Q Consensus 81 Pg~~~~~~~~~ysGyv~V~~~~~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~-~~l~~N~ 159 (452)
||...++++++|||||+|+++.+++||||||||+.+++++||||||||||||||+ +|+|.|+|||+++.++ .++++||
T Consensus 1 pg~~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~l~~n~ 79 (415)
T PF00450_consen 1 PGLDEPVPFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSM-WGLFGENGPFRINPDGPYTLEDNP 79 (415)
T ss_dssp TT-SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-TH-HHHHCTTSSEEEETTSTSEEEE-T
T ss_pred CCCCCCCCceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccc-cccccccCceEEeecccccccccc
Confidence 7877778999999999999888899999999999999999999999999999999 6999999999999553 7899999
Q ss_pred CCccccceeEEEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHH
Q 012985 160 YAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTIL 239 (452)
Q Consensus 160 ~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~ 239 (452)
+||+++||||||||||||||||+++..++. .+++++|+++++||+.||.+||+|+++||||+||||||||||.+|.+|+
T Consensus 80 ~sW~~~an~l~iD~PvGtGfS~~~~~~~~~-~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~ 158 (415)
T PF00450_consen 80 YSWNKFANLLFIDQPVGTGFSYGNDPSDYV-WNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYIL 158 (415)
T ss_dssp T-GGGTSEEEEE--STTSTT-EESSGGGGS--SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHH
T ss_pred cccccccceEEEeecCceEEeecccccccc-chhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhh
Confidence 999999999999999999999998877655 4889999999999999999999999999999999999999999999999
Q ss_pred HcC--CCCceeeeeeeEEecccccccccccchhhhhhccCCCCHHHHHHHHHhhhhc--CCCCchhHHHHHHHHHH----
Q 012985 240 SKN--TSKTIINLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINKYCDFA--TGQLSTSCDQYQTQGVR---- 311 (452)
Q Consensus 240 ~~n--~~~~~inLkGI~IGNg~id~~~~~~~~~~y~~~~glIs~~~~~~i~~~C~~~--~~~~~~~C~~a~~~~~~---- 311 (452)
++| ...+.||||||+||||++||..+..++.+|+|.||+|++++++.+.+.|... .......|..+.+.+..
T Consensus 159 ~~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~ 238 (415)
T PF00450_consen 159 QQNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACPQCQKAITECAAALDELSCQYAI 238 (415)
T ss_dssp HHTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSHSSSCCHHHHHHHHHHHHHHCHH
T ss_pred hccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccccccchhhHHHHHHHhhhhhccc
Confidence 998 2346899999999999999999999999999999999999999999999642 12456789888877765
Q ss_pred --HhCCCcccccccccCCCCCCCCCCCCCccccCCCchhHHhhhcCcHHHHhhccCCc---cCcccCCCCc-c----cCC
Q 012985 312 --EYGQIDLYNVYAPLCKSSAPPPPTAGVIREYDPCSDKYVNSYLNLAEVQAALHAKH---TNWSTCSDLT-W----TDS 381 (452)
Q Consensus 312 --~~g~in~YnI~~~~C~~~~~~~~~~~~~~~~dpc~~~~~~~YLN~~dVq~ALhv~~---~~w~~Cs~~v-~----~d~ 381 (452)
..+++|+|||+.+.|...... .......+++....+..|||+++||+||||+. ..|..|++.| + .|.
T Consensus 239 ~~~~~~~n~Ydi~~~~~~~~~~~---~~~~~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~~~~w~~~~~~V~~~~~~~d~ 315 (415)
T PF00450_consen 239 SQCNGGINPYDIRQPCYNPSRSS---YDNSPSNDPPDDDYLEAYLNRPDVREALHVPVDSNVNWQSCNDAVNFNWLYDDF 315 (415)
T ss_dssp HHHHTTSETTSTTSEETT-SHCT---TCCCCTTTTTCHHHHHHHHTSHHHHHHTT-STTTSSS--SB-HHHHHHCCTCCC
T ss_pred ccccCCcceeeeecccccccccc---ccccccccccchhhHHHHhccHHHHHhhCCCcccCCcccccCcccccccccccc
Confidence 347999999998654311000 00011223445678999999999999999972 2399999977 2 477
Q ss_pred CCChHHHHHHHHHcCCeEEEEecCCCcccCchhHHHHHHhCCCCCCcceeceEe--CC------------eEEEEEecCc
Q 012985 382 PSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYA--DG------------WWICARVQGS 447 (452)
Q Consensus 382 ~~s~lp~i~~LL~~girVlIYsGD~D~i~p~~Gt~~wi~~L~w~~~~~w~pW~~--~g------------~~~~~~~~g~ 447 (452)
+.++.+.+++||++|+|||||+||+|++||+.||++||++|+|+++++|++|.. ++ .++.++++||
T Consensus 316 ~~~~~~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGH 395 (415)
T PF00450_consen 316 MPSSIPDLPELLDNGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGH 395 (415)
T ss_dssp -SBCHHHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--S
T ss_pred cccchhhhhhhhhccceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcc
Confidence 889999999999999999999999999999999999999999999999999987 44 2899999999
Q ss_pred cccC
Q 012985 448 DIHH 451 (452)
Q Consensus 448 ~~~~ 451 (452)
|||+
T Consensus 396 mvP~ 399 (415)
T PF00450_consen 396 MVPQ 399 (415)
T ss_dssp SHHH
T ss_pred cChh
Confidence 9974
No 5
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=2.3e-85 Score=690.67 Aligned_cols=349 Identities=29% Similarity=0.569 Sum_probs=299.9
Q ss_pred CCCCceeEeeEEEecC-CCCceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCcc
Q 012985 85 EGVDFDQYAGYLTVDP-KAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWN 163 (452)
Q Consensus 85 ~~~~~~~ysGyv~V~~-~~~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~ 163 (452)
++.++++|||||+|+. ..+++||||||||+.+|+++||+|||||||||||+ +|+|.|+|||+|+.++.++++||+||+
T Consensus 41 ~~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~-~G~f~E~GP~~i~~~~~~~~~n~~sW~ 119 (462)
T PTZ00472 41 CDPSVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSM-FALLAENGPCLMNETTGDIYNNTYSWN 119 (462)
T ss_pred cCCCCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHH-HhhhccCCCeEEeCCCCceeECCcccc
Confidence 4567899999999975 45789999999999999999999999999999999 699999999999999888999999999
Q ss_pred ccceeEEEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcC-
Q 012985 164 NVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKN- 242 (452)
Q Consensus 164 ~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n- 242 (452)
+.+||||||||+||||||++.. ++. .+++++|+|+++||+.||++||+|++++|||+||||||||+|.+|.+|+++|
T Consensus 120 ~~~~~l~iDqP~G~G~S~~~~~-~~~-~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~ 197 (462)
T PTZ00472 120 NEAYVIYVDQPAGVGFSYADKA-DYD-HNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNK 197 (462)
T ss_pred cccCeEEEeCCCCcCcccCCCC-CCC-CChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhcc
Confidence 9999999999999999999754 444 4778999999999999999999999999999999999999999999999998
Q ss_pred C-CCceeeeeeeEEecccccccccccchhhhhhc-------cCCCCHHHHHHHHH---hh-------hhcCCCCchhHHH
Q 012985 243 T-SKTIINLKGIAIGNAWIDDNLCTKGMFDFFWT-------HALNSDETNAAINK---YC-------DFATGQLSTSCDQ 304 (452)
Q Consensus 243 ~-~~~~inLkGI~IGNg~id~~~~~~~~~~y~~~-------~glIs~~~~~~i~~---~C-------~~~~~~~~~~C~~ 304 (452)
. ...+||||||+|||||+||..|..++.+|+|. +|+|++++++++.+ .| ..........|..
T Consensus 198 ~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~~~~~~~c~~ 277 (462)
T PTZ00472 198 KGDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPDDADSSCSV 277 (462)
T ss_pred ccCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccCCCcchHHHH
Confidence 2 34689999999999999999999999999996 58999999988864 34 2211123345755
Q ss_pred HHHHHHH-----HhCCCcccccccccCCCCCCCCCCCCCccccCCCch-hHHhhhcCcHHHHhhccCCccCcccCCCCc-
Q 012985 305 YQTQGVR-----EYGQIDLYNVYAPLCKSSAPPPPTAGVIREYDPCSD-KYVNSYLNLAEVQAALHAKHTNWSTCSDLT- 377 (452)
Q Consensus 305 a~~~~~~-----~~g~in~YnI~~~~C~~~~~~~~~~~~~~~~dpc~~-~~~~~YLN~~dVq~ALhv~~~~w~~Cs~~v- 377 (452)
+...|.. ..+++|+|||+.+ |.. ++|.+ ..+..|||+++||+||||+...|+.|++.|
T Consensus 278 a~~~c~~~~~~~~~~g~n~Ydi~~~-c~~--------------~~c~~~~~~~~yLN~~~Vq~AL~v~~~~w~~c~~~V~ 342 (462)
T PTZ00472 278 ARALCNEYIAVYSATGLNNYDIRKP-CIG--------------PLCYNMDNTIAFMNREDVQSSLGVKPATWQSCNMEVN 342 (462)
T ss_pred HHHHHHHHHHHHHhcCCChhheecc-CCC--------------CCccCHHHHHHHhCCHHHHHHhCCCCCCceeCCHHHH
Confidence 5544432 1367999999975 742 35764 578999999999999999865599999988
Q ss_pred --c-cCCCCChHHHHHHHHHcCCeEEEEecCCCcccCchhHHHHHHhCCCCCCc-----ceece-EeCC-----------
Q 012985 378 --W-TDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVET-----AWYPW-YADG----------- 437 (452)
Q Consensus 378 --~-~d~~~s~lp~i~~LL~~girVlIYsGD~D~i~p~~Gt~~wi~~L~w~~~~-----~w~pW-~~~g----------- 437 (452)
+ .|.+.++.+.+++||++|+|||||+||.|++||+.||++|+++|+|++++ +|+|| +.++
T Consensus 343 ~~~~~D~~~~~~~~l~~LL~~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~ 422 (462)
T PTZ00472 343 LMFEMDWMKNFNYTVPGLLEDGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAAS 422 (462)
T ss_pred HHhhhccccchHHHHHHHHhcCceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEec
Confidence 3 38888899999999999999999999999999999999999999999864 66899 4333
Q ss_pred ------eEEEEEecCccccC
Q 012985 438 ------WWICARVQGSDIHH 451 (452)
Q Consensus 438 ------~~~~~~~~g~~~~~ 451 (452)
.++.++++|||+|+
T Consensus 423 ~~~~~l~~~~V~~AGH~vp~ 442 (462)
T PTZ00472 423 NTSSGFSFVQVYNAGHMVPM 442 (462)
T ss_pred ccCCCeEEEEECCCCccChh
Confidence 25566789999986
No 6
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=3.9e-65 Score=514.49 Aligned_cols=276 Identities=27% Similarity=0.489 Sum_probs=234.3
Q ss_pred cceeEEEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcC--
Q 012985 165 VANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKN-- 242 (452)
Q Consensus 165 ~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n-- 242 (452)
+|||||||||+||||||+++..++ .+|+++|+|++.||+.||++||||+++||||+||||||||||.||+.|+++|
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~--~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~ 78 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDK--TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYI 78 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCc--cccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhccc
Confidence 489999999999999999766554 3677788999999999999999999999999999999999999999999988
Q ss_pred CCCceeeeeeeEEecccccccccccchhhhhhccCCCCHHHHHHHHHhhhhcC---CCCchhHHHHHHHHHHHhCCCccc
Q 012985 243 TSKTIINLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINKYCDFAT---GQLSTSCDQYQTQGVREYGQIDLY 319 (452)
Q Consensus 243 ~~~~~inLkGI~IGNg~id~~~~~~~~~~y~~~~glIs~~~~~~i~~~C~~~~---~~~~~~C~~a~~~~~~~~g~in~Y 319 (452)
....+||||||+|||||+||..+..++.+|+|.||+|++++++.+.+.|.... ......|.+++..+....+.+|+|
T Consensus 79 ~~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~ 158 (319)
T PLN02213 79 CCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIH 158 (319)
T ss_pred ccCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHHHHHhcCCHh
Confidence 34568999999999999999999999999999999999999999999997421 134568999888777777899999
Q ss_pred ccccccCCCCCCCCCCCCCccccCCCch---hHHhhhcCcHHHHhhccCCc---cCcccCCCCc-ccCCCCChHHHHHHH
Q 012985 320 NVYAPLCKSSAPPPPTAGVIREYDPCSD---KYVNSYLNLAEVQAALHAKH---TNWSTCSDLT-WTDSPSTVLPTIQQL 392 (452)
Q Consensus 320 nI~~~~C~~~~~~~~~~~~~~~~dpc~~---~~~~~YLN~~dVq~ALhv~~---~~w~~Cs~~v-~~d~~~s~lp~i~~L 392 (452)
|++.+.|..... ..++|.. ..+..|||+++||+||||+. ..|..||..| +.....++++.+.++
T Consensus 159 ~~~~~~~~~~~~---------~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~c~~~v~~~~d~~~~~~~~~~~ 229 (319)
T PLN02213 159 HILTPDCDVTNV---------TSPDCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNRTIPYNHDIVSSIPYHMNN 229 (319)
T ss_pred hcccCcccCccC---------CCCCcccchhHHHHHHhCCHHHHHHhCcCCCCCCCCccCCcccccccccccchHHHHHH
Confidence 999766743110 1135652 36899999999999999974 2399999988 443334566666677
Q ss_pred HHcCCeEEEEecCCCcccCchhHHHHHHhCCCCCCcceeceEeCC-------------eEEEEEecCccccC
Q 012985 393 IASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADG-------------WWICARVQGSDIHH 451 (452)
Q Consensus 393 L~~girVlIYsGD~D~i~p~~Gt~~wi~~L~w~~~~~w~pW~~~g-------------~~~~~~~~g~~~~~ 451 (452)
|.+|+|||||+||.|++||++||++|+++|+|++.++|+||++++ .++.+|++||||++
T Consensus 230 l~~~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~~ 301 (319)
T PLN02213 230 SISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEY 301 (319)
T ss_pred HhcCceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCCc
Confidence 778999999999999999999999999999999999999998654 26778899999975
No 7
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=6.7e-59 Score=478.51 Aligned_cols=345 Identities=25% Similarity=0.471 Sum_probs=280.7
Q ss_pred CceeEeeEEEecCCCCceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccc-cCCCCccccc
Q 012985 88 DFDQYAGYLTVDPKAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLY-RNEYAWNNVA 166 (452)
Q Consensus 88 ~~~~ysGyv~V~~~~~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~-~N~~sW~~~a 166 (452)
++++|+||.... -.+|||+||++.+|+++|++|||||||||||+ +|+|.|+||+||+.+.+... .||+||+.++
T Consensus 73 pv~~~~g~~d~e----d~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~-~g~l~elGP~rI~~~~~P~~~~NP~SW~~~a 147 (498)
T COG2939 73 PVRDYTGYPDAE----DFFFFYTFESPNDPANRPVIFWLNGGPGCSSV-TGLLGELGPKRIQSGTSPSYPDNPGSWLDFA 147 (498)
T ss_pred chhhccCCcccc----eeEEEEEecCCCCCCCCceEEEecCCCChHhh-hhhhhhcCCeeeeCCCCCCCCCCccccccCC
Confidence 467788883332 23999999999999999999999999999999 79999999999999842233 6999999999
Q ss_pred eeEEEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCC--CEEEEeccccccccHHHHHHHHHcC-C
Q 012985 167 NVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNR--DFFITGESYAGHYVPQLAYTILSKN-T 243 (452)
Q Consensus 167 nvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~--~~yi~GESYgG~yvP~lA~~I~~~n-~ 243 (452)
||||||||+||||||+.. .+.. .+...+.+|++.|++.||+.||+|.+. ++||+||||||||+|.||+.|+++| .
T Consensus 148 dLvFiDqPvGTGfS~a~~-~e~~-~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~ 225 (498)
T COG2939 148 DLVFIDQPVGTGFSRALG-DEKK-KDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIA 225 (498)
T ss_pred ceEEEecCcccCcccccc-cccc-cchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccc
Confidence 999999999999999832 2232 366678999999999999999999877 9999999999999999999999987 4
Q ss_pred CCceeeeeeeEEecc-cccccccccchhhhhhc----cCCCCHHHHHHHHHhhhhc----------CCCCchhHHHHHHH
Q 012985 244 SKTIINLKGIAIGNA-WIDDNLCTKGMFDFFWT----HALNSDETNAAINKYCDFA----------TGQLSTSCDQYQTQ 308 (452)
Q Consensus 244 ~~~~inLkGI~IGNg-~id~~~~~~~~~~y~~~----~glIs~~~~~~i~~~C~~~----------~~~~~~~C~~a~~~ 308 (452)
.+..+||++++|||| +|||.+++..+..++.. ++..+.+.++++++.|+.. .......|..+...
T Consensus 226 ~~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~~~~~~ 305 (498)
T COG2939 226 LNGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCENASAY 305 (498)
T ss_pred cCCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHHHHHHH
Confidence 456899999999999 99999999999988875 4566778888888877642 11234568777766
Q ss_pred HHHHh------CC---CcccccccccCCCCCCCCCCCCCccccCCCch--hHHhhhcCcHHHHhhccCCccCcccCCCCc
Q 012985 309 GVREY------GQ---IDLYNVYAPLCKSSAPPPPTAGVIREYDPCSD--KYVNSYLNLAEVQAALHAKHTNWSTCSDLT 377 (452)
Q Consensus 309 ~~~~~------g~---in~YnI~~~~C~~~~~~~~~~~~~~~~dpc~~--~~~~~YLN~~dVq~ALhv~~~~w~~Cs~~v 377 (452)
|.... .+ .|.|||+. .|..... ..-|.+ .++..|+|...+|+++......|..|..++
T Consensus 306 ~~~~~~~~~~r~~~~~~n~y~~r~-~~~d~g~----------~~~~y~~~~~~ld~~~~~~~~~~~~~~~d~~~~c~t~a 374 (498)
T COG2939 306 LTGLMREYVGRAGGRLLNVYDIRE-ECRDPGL----------GGSCYDTLSTSLDYFNFDPEQEVNDPEVDNISGCTTDA 374 (498)
T ss_pred HHhcchhhhccccccccccccchh-hcCCCCc----------ccccccceeeccccccccchhccccccccchhccchHH
Confidence 65432 23 89999986 4754211 123543 367889998899999998887799999988
Q ss_pred ---c----cCCCCChHHHHHHHHHcCCeEEEEecCCCcccCchhHHHHHHhCCCCCCcce-----eceEeC---------
Q 012985 378 ---W----TDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAW-----YPWYAD--------- 436 (452)
Q Consensus 378 ---~----~d~~~s~lp~i~~LL~~girVlIYsGD~D~i~p~~Gt~~wi~~L~w~~~~~w-----~pW~~~--------- 436 (452)
| .+...+....+..++.+|+.+++|.||.|.+|++.|++.|..+|+|.+...| ++|...
T Consensus 375 ~~~f~~~~~~~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~~~a~~~~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~ 454 (498)
T COG2939 375 MTDFLTFTGGWAKPSRYLVLNLLVNNVWILLYAGDKDFICNLRGNMALDPKLKWLGASGYFDASTPFFWSRLTLEEMGGY 454 (498)
T ss_pred HHhhhhhcCCcccccHHHHhhhhhcCCceeeeecCchhHhhhhhhcccCCcceEeeecchhhhcCCCcccccchhhcccc
Confidence 3 2556677788889999999999999999999999999999999999998644 345431
Q ss_pred -----CeEEEEEecCcccc
Q 012985 437 -----GWWICARVQGSDIH 450 (452)
Q Consensus 437 -----g~~~~~~~~g~~~~ 450 (452)
-.++.+|-+||||+
T Consensus 455 ~s~~n~~~~r~y~aGHMvp 473 (498)
T COG2939 455 KSYRNLTFLRIYEAGHMVP 473 (498)
T ss_pred cccCCceEEEEecCcceee
Confidence 13899999999995
No 8
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.8e-57 Score=441.04 Aligned_cols=351 Identities=23% Similarity=0.419 Sum_probs=285.4
Q ss_pred eEeeEEEecCCCCceEEEEEEecCCC-CCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeE
Q 012985 91 QYAGYLTVDPKAGRALFYYFVESPQS-SSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVL 169 (452)
Q Consensus 91 ~ysGyv~V~~~~~~~lFy~f~ea~~~-~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvl 169 (452)
+-.|||+|. .+.++|+|++.+... ...+||.|||+||||.||.|||+|+|+||...+ +++|+.+|.|.|+||
T Consensus 3 ~~wg~v~vr--~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~-----~~~r~~TWlk~adll 75 (414)
T KOG1283|consen 3 EDWGYVDVR--TGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLD-----GSPRDWTWLKDADLL 75 (414)
T ss_pred ccccceeee--cCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccC-----CCcCCchhhhhccEE
Confidence 347999997 468999999998754 478899999999999999999999999999865 567999999999999
Q ss_pred EEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcC-CCCcee
Q 012985 170 FLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKN-TSKTII 248 (452)
Q Consensus 170 fiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n-~~~~~i 248 (452)
|||.|||+||||.+..+.|. .+++++|.|+.+.|+.||..+|||+.+||||+-|||||+..+.+|..+.+.- .++.+.
T Consensus 76 fvDnPVGaGfSyVdg~~~Y~-~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~ 154 (414)
T KOG1283|consen 76 FVDNPVGAGFSYVDGSSAYT-TNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKL 154 (414)
T ss_pred EecCCCcCceeeecCccccc-ccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceee
Confidence 99999999999999887676 5899999999999999999999999999999999999999999999887766 456889
Q ss_pred eeeeeEEecccccccccccchhhhhhccCCCCHHHHHHHHH---hhhhcC-----CCCchhHHHHHHHHHHHhCCCcccc
Q 012985 249 NLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINK---YCDFAT-----GQLSTSCDQYQTQGVREYGQIDLYN 320 (452)
Q Consensus 249 nLkGI~IGNg~id~~~~~~~~~~y~~~~glIs~~~~~~i~~---~C~~~~-----~~~~~~C~~a~~~~~~~~g~in~Yn 320 (452)
|+.|+++|++||+|..-..++.+|++..+++++...+.+.+ .|.... ..++.......+.+..+..++|.||
T Consensus 155 nf~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~~~sn~VdfYN 234 (414)
T KOG1283|consen 155 NFIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLISRESNGVDFYN 234 (414)
T ss_pred cceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcceeecccCcceee
Confidence 99999999999999999999999999999999988877754 343210 1233333344445556677899999
Q ss_pred cccccCCCCCC-CCCCC--------CCcccc-CCCchhHHhhhcCcHHHHhhccCCccC--cccCCCCccc----CCCCC
Q 012985 321 VYAPLCKSSAP-PPPTA--------GVIREY-DPCSDKYVNSYLNLAEVQAALHAKHTN--WSTCSDLTWT----DSPST 384 (452)
Q Consensus 321 I~~~~C~~~~~-~~~~~--------~~~~~~-dpc~~~~~~~YLN~~dVq~ALhv~~~~--w~~Cs~~v~~----d~~~s 384 (452)
|..+.-.+... .+.+. +..... .+-..+.+.++||-| ||++|++.++. |-..+..+|. |+|++
T Consensus 235 il~~t~~d~~~~ss~~~~~~~~~~rrl~~~~~~~~~~D~L~~lM~g~-vrkkLgIip~~~~wGgqsg~vFt~lq~dFMKP 313 (414)
T KOG1283|consen 235 ILTKTLGDQYSLSSRAAMTPEEVMRRLLVRFVGDEDRDKLSDLMNGP-VRKKLGIIPGGVKWGGQSGDVFTKLQGDFMKP 313 (414)
T ss_pred eeccCCCcchhhhhhhhcchHHHHHHHHhccCcchhHHHHHHHhccc-ccccccccCCCCcccCcCCchHHHhhhhhccc
Confidence 99875433221 11000 000011 122234688999988 99999998764 9999999953 99999
Q ss_pred hHHHHHHHHHcCCeEEEEecCCCcccCchhHHHHHHhCCCCCCccee--ceE---e------------CCeEEEEEecCc
Q 012985 385 VLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWY--PWY---A------------DGWWICARVQGS 447 (452)
Q Consensus 385 ~lp~i~~LL~~girVlIYsGD~D~i~p~~Gt~~wi~~L~w~~~~~w~--pW~---~------------~g~~~~~~~~g~ 447 (452)
++..+.+||++|++|.||+|++|.||.+.|+++|+++|+|+....+. ||+ + +-.+.-+--+||
T Consensus 314 vi~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~s~~l~gy~ktyknl~f~wilragh 393 (414)
T KOG1283|consen 314 VISKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITVSRVLEGYEKTYKNLSFFWILRAGH 393 (414)
T ss_pred HHHHHHHHHhCCceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccceeecchhhhhhccceeEEeecccC
Confidence 99999999999999999999999999999999999999999987443 442 2 123555677899
Q ss_pred ccc
Q 012985 448 DIH 450 (452)
Q Consensus 448 ~~~ 450 (452)
||+
T Consensus 394 mvp 396 (414)
T KOG1283|consen 394 MVP 396 (414)
T ss_pred ccc
Confidence 986
No 9
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=98.24 E-value=5.4e-06 Score=78.24 Aligned_cols=116 Identities=22% Similarity=0.313 Sum_probs=75.6
Q ss_pred EEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCC
Q 012985 107 FYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSS 186 (452)
Q Consensus 107 Fy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~ 186 (452)
+|..+.. ..++.|+||+++|.+|.+.. +..+.+ .+ .+..+++.+|.| |.|.|-.....
T Consensus 2 ~~~~~~~--~~~~~~~iv~lhG~~~~~~~-~~~~~~-----------~l-------~~~~~vi~~D~~-G~G~S~~~~~~ 59 (257)
T TIGR03611 2 HYELHGP--PDADAPVVVLSSGLGGSGSY-WAPQLD-----------VL-------TQRFHVVTYDHR-GTGRSPGELPP 59 (257)
T ss_pred EEEEecC--CCCCCCEEEEEcCCCcchhH-HHHHHH-----------HH-------HhccEEEEEcCC-CCCCCCCCCcc
Confidence 4555433 23467999999998777665 543332 11 234799999987 77777543222
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccccc
Q 012985 187 DYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (452)
Q Consensus 187 ~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~ 262 (452)
.+ +.++.++++.+++.. . +..+++|+|+|+||..+..+|...-+ .++++++.+++..+
T Consensus 60 ~~---~~~~~~~~~~~~i~~----~---~~~~~~l~G~S~Gg~~a~~~a~~~~~--------~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 60 GY---SIAHMADDVLQLLDA----L---NIERFHFVGHALGGLIGLQLALRYPE--------RLLSLVLINAWSRP 117 (257)
T ss_pred cC---CHHHHHHHHHHHHHH----h---CCCcEEEEEechhHHHHHHHHHHChH--------HhHHheeecCCCCC
Confidence 22 345566666666643 2 34679999999999999988875332 37888887776554
No 10
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=98.23 E-value=5.6e-06 Score=79.21 Aligned_cols=131 Identities=24% Similarity=0.298 Sum_probs=80.3
Q ss_pred eEeeEEEecCCCCceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEE
Q 012985 91 QYAGYLTVDPKAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLF 170 (452)
Q Consensus 91 ~ysGyv~V~~~~~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlf 170 (452)
+..++++++. ..+.|.-+. .+...|.||+++||||+++..+..+.+. +.. +-.+|+.
T Consensus 2 ~~~~~~~~~~---~~~~~~~~~---~~~~~~~vl~~hG~~g~~~~~~~~~~~~-----------l~~------~g~~vi~ 58 (288)
T TIGR01250 2 QIEGIITVDG---GYHLFTKTG---GEGEKIKLLLLHGGPGMSHEYLENLREL-----------LKE------EGREVIM 58 (288)
T ss_pred CccceecCCC---CeEEEEecc---CCCCCCeEEEEcCCCCccHHHHHHHHHH-----------HHh------cCCEEEE
Confidence 4566777752 344444332 2234688999999999987633333221 111 2478999
Q ss_pred EecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeee
Q 012985 171 LETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINL 250 (452)
Q Consensus 171 iDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inL 250 (452)
+|.| |.|.|......+.. .+-+..++++..++. . +..++++|+|+|+||..+..+|..- +-.+
T Consensus 59 ~d~~-G~G~s~~~~~~~~~-~~~~~~~~~~~~~~~----~---~~~~~~~liG~S~Gg~ia~~~a~~~--------p~~v 121 (288)
T TIGR01250 59 YDQL-GCGYSDQPDDSDEL-WTIDYFVDELEEVRE----K---LGLDKFYLLGHSWGGMLAQEYALKY--------GQHL 121 (288)
T ss_pred EcCC-CCCCCCCCCccccc-ccHHHHHHHHHHHHH----H---cCCCcEEEEEeehHHHHHHHHHHhC--------cccc
Confidence 9987 77777532221100 134455666555443 2 2345799999999999988888642 2347
Q ss_pred eeeEEeccccc
Q 012985 251 KGIAIGNAWID 261 (452)
Q Consensus 251 kGI~IGNg~id 261 (452)
+++++.++...
T Consensus 122 ~~lvl~~~~~~ 132 (288)
T TIGR01250 122 KGLIISSMLDS 132 (288)
T ss_pred ceeeEeccccc
Confidence 88888877653
No 11
>PRK00870 haloalkane dehalogenase; Provisional
Probab=98.16 E-value=3.3e-05 Score=76.76 Aligned_cols=141 Identities=21% Similarity=0.258 Sum_probs=87.4
Q ss_pred cCCccccCCCCCCCCCceeEeeEEEecCCCCc--eEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcC
Q 012985 73 EADKIKTLPGQPEGVDFDQYAGYLTVDPKAGR--ALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNS 150 (452)
Q Consensus 73 ~~d~v~~LPg~~~~~~~~~ysGyv~V~~~~~~--~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~ 150 (452)
+..++.+||.+|. --.|+.++..+|. .++|.- . .++ +.|.||.++|.|+.+.. |..+.+
T Consensus 7 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~y~~--~-G~~-~~~~lvliHG~~~~~~~-w~~~~~-------- 67 (302)
T PRK00870 7 PDSRFENLPDYPF------APHYVDVDDGDGGPLRMHYVD--E-GPA-DGPPVLLLHGEPSWSYL-YRKMIP-------- 67 (302)
T ss_pred CcccccCCcCCCC------CceeEeecCCCCceEEEEEEe--c-CCC-CCCEEEEECCCCCchhh-HHHHHH--------
Confidence 3457888998774 2457888864444 466552 2 223 46889999999877776 544431
Q ss_pred CCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccc
Q 012985 151 DGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHY 230 (452)
Q Consensus 151 ~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~y 230 (452)
.|.. +..+|+.+|.| |-|.| .........+.++.|+++.++|. .. ...++.|+|+|+||..
T Consensus 68 ---~L~~------~gy~vi~~Dl~-G~G~S--~~~~~~~~~~~~~~a~~l~~~l~----~l---~~~~v~lvGhS~Gg~i 128 (302)
T PRK00870 68 ---ILAA------AGHRVIAPDLI-GFGRS--DKPTRREDYTYARHVEWMRSWFE----QL---DLTDVTLVCQDWGGLI 128 (302)
T ss_pred ---HHHh------CCCEEEEECCC-CCCCC--CCCCCcccCCHHHHHHHHHHHHH----Hc---CCCCEEEEEEChHHHH
Confidence 1211 34799999987 66655 32211000133445555555554 32 3468999999999998
Q ss_pred cHHHHHHHHHcCCCCceeeeeeeEEeccc
Q 012985 231 VPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (452)
Q Consensus 231 vP~lA~~I~~~n~~~~~inLkGI~IGNg~ 259 (452)
+-.+|..--+ .++++++.++.
T Consensus 129 a~~~a~~~p~--------~v~~lvl~~~~ 149 (302)
T PRK00870 129 GLRLAAEHPD--------RFARLVVANTG 149 (302)
T ss_pred HHHHHHhChh--------heeEEEEeCCC
Confidence 8888864222 37888877654
No 12
>PHA02857 monoglyceride lipase; Provisional
Probab=98.08 E-value=2.4e-05 Score=76.40 Aligned_cols=124 Identities=15% Similarity=0.161 Sum_probs=81.9
Q ss_pred CCceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccc-cceeEEEecCCCcccc
Q 012985 102 AGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNN-VANVLFLETPAGVGFS 180 (452)
Q Consensus 102 ~~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~-~anvlfiDqPvGvGfS 180 (452)
.|..|+|.+++.. +..+|+||.++|.+++|.. |-.+.+ .+.+ -..++.+|.| |.|.|
T Consensus 9 ~g~~l~~~~~~~~--~~~~~~v~llHG~~~~~~~-~~~~~~------------------~l~~~g~~via~D~~-G~G~S 66 (276)
T PHA02857 9 DNDYIYCKYWKPI--TYPKALVFISHGAGEHSGR-YEELAE------------------NISSLGILVFSHDHI-GHGRS 66 (276)
T ss_pred CCCEEEEEeccCC--CCCCEEEEEeCCCccccch-HHHHHH------------------HHHhCCCEEEEccCC-CCCCC
Confidence 5678999888774 3456999999998666665 544432 1223 3689999976 77776
Q ss_pred ccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccc
Q 012985 181 YSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWI 260 (452)
Q Consensus 181 y~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~i 260 (452)
-... ....+-....+|+..++....++++ ..+++|+|+|.||..+..+|.+ . +-+++|+++.+|.+
T Consensus 67 ~~~~---~~~~~~~~~~~d~~~~l~~~~~~~~---~~~~~lvG~S~GG~ia~~~a~~---~-----p~~i~~lil~~p~~ 132 (276)
T PHA02857 67 NGEK---MMIDDFGVYVRDVVQHVVTIKSTYP---GVPVFLLGHSMGATISILAAYK---N-----PNLFTAMILMSPLV 132 (276)
T ss_pred CCcc---CCcCCHHHHHHHHHHHHHHHHhhCC---CCCEEEEEcCchHHHHHHHHHh---C-----ccccceEEEecccc
Confidence 4321 1111223456777777765544443 5789999999999877666643 1 22489999998876
Q ss_pred c
Q 012985 261 D 261 (452)
Q Consensus 261 d 261 (452)
+
T Consensus 133 ~ 133 (276)
T PHA02857 133 N 133 (276)
T ss_pred c
Confidence 5
No 13
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.05 E-value=3.7e-05 Score=74.05 Aligned_cols=110 Identities=18% Similarity=0.107 Sum_probs=72.0
Q ss_pred CCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChh
Q 012985 116 SSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNN 195 (452)
Q Consensus 116 ~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~ 195 (452)
.+...|.||+++|.+|.+.. |..+.+ .| .+..+++.+|.| |-|.|....... .+-+.
T Consensus 24 g~~~~~~vv~~hG~~~~~~~-~~~~~~-----------~l-------~~~~~vi~~D~~-G~G~S~~~~~~~---~~~~~ 80 (278)
T TIGR03056 24 GPTAGPLLLLLHGTGASTHS-WRDLMP-----------PL-------ARSFRVVAPDLP-GHGFTRAPFRFR---FTLPS 80 (278)
T ss_pred CCCCCCeEEEEcCCCCCHHH-HHHHHH-----------HH-------hhCcEEEeecCC-CCCCCCCccccC---CCHHH
Confidence 34456999999999777666 543332 12 123789999976 777664332211 24456
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccccccc
Q 012985 196 TAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDN 263 (452)
Q Consensus 196 ~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~~ 263 (452)
.|+++.++++. . ..++++|+|+|+||..+..+|.+. +-.++++++.++..++.
T Consensus 81 ~~~~l~~~i~~----~---~~~~~~lvG~S~Gg~~a~~~a~~~--------p~~v~~~v~~~~~~~~~ 133 (278)
T TIGR03056 81 MAEDLSALCAA----E---GLSPDGVIGHSAGAAIALRLALDG--------PVTPRMVVGINAALMPF 133 (278)
T ss_pred HHHHHHHHHHH----c---CCCCceEEEECccHHHHHHHHHhC--------CcccceEEEEcCccccc
Confidence 67777666643 2 346789999999998877777542 22478899988876643
No 14
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=97.90 E-value=9.9e-05 Score=72.90 Aligned_cols=123 Identities=16% Similarity=0.135 Sum_probs=79.3
Q ss_pred EEEecCCCCceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecC
Q 012985 95 YLTVDPKAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETP 174 (452)
Q Consensus 95 yv~V~~~~~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqP 174 (452)
|++++ +.+++|.-. .+ ..|.||+|+|.++.+.. +-.+.+ .| .+..+++.+|.|
T Consensus 12 ~~~~~---~~~i~y~~~----G~-~~~~vlllHG~~~~~~~-w~~~~~-----------~L-------~~~~~vi~~Dlp 64 (294)
T PLN02824 12 TWRWK---GYNIRYQRA----GT-SGPALVLVHGFGGNADH-WRKNTP-----------VL-------AKSHRVYAIDLL 64 (294)
T ss_pred eEEEc---CeEEEEEEc----CC-CCCeEEEECCCCCChhH-HHHHHH-----------HH-------HhCCeEEEEcCC
Confidence 66664 455665422 11 23789999999888887 655443 12 244699999987
Q ss_pred CCccccccCCCCCCC---CCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeee
Q 012985 175 AGVGFSYSNTSSDYS---NPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLK 251 (452)
Q Consensus 175 vGvGfSy~~~~~~~~---~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLk 251 (452)
|.|.|-........ ..+.++.|+++..+|.++ ..++++|+|+|.||..+-.+|.+--+ .++
T Consensus 65 -G~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p~--------~v~ 128 (294)
T PLN02824 65 -GYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-------VGDPAFVICNSVGGVVGLQAAVDAPE--------LVR 128 (294)
T ss_pred -CCCCCCCCccccccccccCCHHHHHHHHHHHHHHh-------cCCCeEEEEeCHHHHHHHHHHHhChh--------hee
Confidence 66666432211100 014455677776666643 34689999999999999888865332 389
Q ss_pred eeEEecccc
Q 012985 252 GIAIGNAWI 260 (452)
Q Consensus 252 GI~IGNg~i 260 (452)
++++.|+..
T Consensus 129 ~lili~~~~ 137 (294)
T PLN02824 129 GVMLINISL 137 (294)
T ss_pred EEEEECCCc
Confidence 999988754
No 15
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=97.86 E-value=0.00011 Score=73.58 Aligned_cols=126 Identities=19% Similarity=0.349 Sum_probs=75.2
Q ss_pred eeEEEecCCCCceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEe
Q 012985 93 AGYLTVDPKAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLE 172 (452)
Q Consensus 93 sGyv~V~~~~~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiD 172 (452)
.+|+.+.+ +..++|.-. ..++ .|-||+++||||.++. ... .. + + . .+..+|+.+|
T Consensus 6 ~~~~~~~~--~~~l~y~~~---g~~~-~~~lvllHG~~~~~~~-~~~-~~---~--------~--~----~~~~~vi~~D 60 (306)
T TIGR01249 6 SGYLNVSD--NHQLYYEQS---GNPD-GKPVVFLHGGPGSGTD-PGC-RR---F--------F--D----PETYRIVLFD 60 (306)
T ss_pred CCeEEcCC--CcEEEEEEC---cCCC-CCEEEEECCCCCCCCC-HHH-Hh---c--------c--C----ccCCEEEEEC
Confidence 47888864 577887632 1223 3457889999987654 111 10 0 0 0 1457999999
Q ss_pred cCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeee
Q 012985 173 TPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKG 252 (452)
Q Consensus 173 qPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkG 252 (452)
.| |.|.|..... ... .+..+.++|+.. +.+.. +..+++++|+||||..+-.+|.+--+ .+++
T Consensus 61 ~~-G~G~S~~~~~-~~~-~~~~~~~~dl~~----l~~~l---~~~~~~lvG~S~GG~ia~~~a~~~p~--------~v~~ 122 (306)
T TIGR01249 61 QR-GCGKSTPHAC-LEE-NTTWDLVADIEK----LREKL---GIKNWLVFGGSWGSTLALAYAQTHPE--------VVTG 122 (306)
T ss_pred CC-CCCCCCCCCC-ccc-CCHHHHHHHHHH----HHHHc---CCCCEEEEEECHHHHHHHHHHHHChH--------hhhh
Confidence 87 7777753211 111 122344555444 44433 34579999999999888777765322 3688
Q ss_pred eEEeccccc
Q 012985 253 IAIGNAWID 261 (452)
Q Consensus 253 I~IGNg~id 261 (452)
+++-+..+.
T Consensus 123 lvl~~~~~~ 131 (306)
T TIGR01249 123 LVLRGIFLL 131 (306)
T ss_pred heeeccccC
Confidence 888776654
No 16
>PRK10673 acyl-CoA esterase; Provisional
Probab=97.85 E-value=8.2e-05 Score=71.19 Aligned_cols=104 Identities=14% Similarity=0.123 Sum_probs=73.7
Q ss_pred CCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCCh
Q 012985 115 QSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDN 194 (452)
Q Consensus 115 ~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~ 194 (452)
+.+.++|.||+++|.+|.+.. +..+.+. +.+..+++.+|.| |-|.|.. ...+ +-+
T Consensus 11 ~~~~~~~~iv~lhG~~~~~~~-~~~~~~~------------------l~~~~~vi~~D~~-G~G~s~~--~~~~---~~~ 65 (255)
T PRK10673 11 QNPHNNSPIVLVHGLFGSLDN-LGVLARD------------------LVNDHDIIQVDMR-NHGLSPR--DPVM---NYP 65 (255)
T ss_pred CCCCCCCCEEEECCCCCchhH-HHHHHHH------------------HhhCCeEEEECCC-CCCCCCC--CCCC---CHH
Confidence 456778999999999888776 5554421 2245799999987 6666643 2222 445
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecc
Q 012985 195 NTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNA 258 (452)
Q Consensus 195 ~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg 258 (452)
+-++|+..+|..+ ..++++|+|+|.||..+..+|.+--+ .++++++.++
T Consensus 66 ~~~~d~~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~~~--------~v~~lvli~~ 114 (255)
T PRK10673 66 AMAQDLLDTLDAL-------QIEKATFIGHSMGGKAVMALTALAPD--------RIDKLVAIDI 114 (255)
T ss_pred HHHHHHHHHHHHc-------CCCceEEEEECHHHHHHHHHHHhCHh--------hcceEEEEec
Confidence 6788888877642 34579999999999999888865332 3788887663
No 17
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=97.72 E-value=0.00029 Score=70.98 Aligned_cols=137 Identities=19% Similarity=0.218 Sum_probs=83.2
Q ss_pred EeeEEEecCCCCceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCcc-ccceeEE
Q 012985 92 YAGYLTVDPKAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWN-NVANVLF 170 (452)
Q Consensus 92 ysGyv~V~~~~~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~-~~anvlf 170 (452)
..++++.. .|..|+|+.+........+|+||+++|..+.++..+-.+. ..+. +-.+|+.
T Consensus 33 ~~~~~~~~--dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~------------------~~L~~~Gy~V~~ 92 (330)
T PLN02298 33 SKSFFTSP--RGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTA------------------IFLAQMGFACFA 92 (330)
T ss_pred ccceEEcC--CCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHH------------------HHHHhCCCEEEE
Confidence 35566653 4678888655432222467899999998433221111111 0123 3479999
Q ss_pred EecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeee
Q 012985 171 LETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINL 250 (452)
Q Consensus 171 iDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inL 250 (452)
+|.| |-|.|- ....+. .+-+..++|+..|++....+ .++...+++|+|+|.||..+-.++.. . +-.+
T Consensus 93 ~D~r-GhG~S~--~~~~~~-~~~~~~~~D~~~~i~~l~~~-~~~~~~~i~l~GhSmGG~ia~~~a~~----~----p~~v 159 (330)
T PLN02298 93 LDLE-GHGRSE--GLRAYV-PNVDLVVEDCLSFFNSVKQR-EEFQGLPRFLYGESMGGAICLLIHLA----N----PEGF 159 (330)
T ss_pred ecCC-CCCCCC--CccccC-CCHHHHHHHHHHHHHHHHhc-ccCCCCCEEEEEecchhHHHHHHHhc----C----cccc
Confidence 9997 666553 222221 14456788888888754432 23445689999999999877655532 1 1248
Q ss_pred eeeEEeccccc
Q 012985 251 KGIAIGNAWID 261 (452)
Q Consensus 251 kGI~IGNg~id 261 (452)
+|+++.+++.+
T Consensus 160 ~~lvl~~~~~~ 170 (330)
T PLN02298 160 DGAVLVAPMCK 170 (330)
T ss_pred eeEEEeccccc
Confidence 99999888764
No 18
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=97.71 E-value=0.0003 Score=71.78 Aligned_cols=128 Identities=16% Similarity=0.234 Sum_probs=80.8
Q ss_pred CCceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccc-cceeEEEecCCCcccc
Q 012985 102 AGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNN-VANVLFLETPAGVGFS 180 (452)
Q Consensus 102 ~~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~-~anvlfiDqPvGvGfS 180 (452)
.|..+||..+...+ .+.+|+||+++|..+.++..+-.+.+ .+.+ -.+|+-+|.| |.|.|
T Consensus 70 ~g~~l~~~~~~p~~-~~~~~~iv~lHG~~~~~~~~~~~~~~------------------~l~~~g~~v~~~D~~-G~G~S 129 (349)
T PLN02385 70 RGVEIFSKSWLPEN-SRPKAAVCFCHGYGDTCTFFFEGIAR------------------KIASSGYGVFAMDYP-GFGLS 129 (349)
T ss_pred CCCEEEEEEEecCC-CCCCeEEEEECCCCCccchHHHHHHH------------------HHHhCCCEEEEecCC-CCCCC
Confidence 46788887665432 24679999999975554431111111 1222 4789999997 66666
Q ss_pred ccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccc
Q 012985 181 YSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWI 260 (452)
Q Consensus 181 y~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~i 260 (452)
-. ...+. .+-+..++|+..+++. +..-+++...+++|+|+|+||..+-.+|.+ + +-.++|+++.+|..
T Consensus 130 ~~--~~~~~-~~~~~~~~dv~~~l~~-l~~~~~~~~~~~~LvGhSmGG~val~~a~~---~-----p~~v~glVLi~p~~ 197 (349)
T PLN02385 130 EG--LHGYI-PSFDDLVDDVIEHYSK-IKGNPEFRGLPSFLFGQSMGGAVALKVHLK---Q-----PNAWDGAILVAPMC 197 (349)
T ss_pred CC--CCCCc-CCHHHHHHHHHHHHHH-HHhccccCCCCEEEEEeccchHHHHHHHHh---C-----cchhhheeEecccc
Confidence 43 22221 1445677888777765 333445666789999999999887666543 1 22378998888765
Q ss_pred c
Q 012985 261 D 261 (452)
Q Consensus 261 d 261 (452)
.
T Consensus 198 ~ 198 (349)
T PLN02385 198 K 198 (349)
T ss_pred c
Confidence 3
No 19
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=97.61 E-value=0.00014 Score=66.30 Aligned_cols=103 Identities=24% Similarity=0.304 Sum_probs=68.4
Q ss_pred EEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChhhHHHHHH
Q 012985 123 VLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYT 202 (452)
Q Consensus 123 ~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~ 202 (452)
||+++|.+|.+.. |..+.+ .| .+..+|+.+|.| |.|.|-.... +...+-++.++++.+
T Consensus 1 vv~~hG~~~~~~~-~~~~~~-----------~l-------~~~~~v~~~d~~-G~G~s~~~~~--~~~~~~~~~~~~l~~ 58 (228)
T PF12697_consen 1 VVFLHGFGGSSES-WDPLAE-----------AL-------ARGYRVIAFDLP-GHGRSDPPPD--YSPYSIEDYAEDLAE 58 (228)
T ss_dssp EEEE-STTTTGGG-GHHHHH-----------HH-------HTTSEEEEEECT-TSTTSSSHSS--GSGGSHHHHHHHHHH
T ss_pred eEEECCCCCCHHH-HHHHHH-----------HH-------hCCCEEEEEecC-Cccccccccc--cCCcchhhhhhhhhh
Confidence 6899999888876 555443 12 156789999987 7776654322 111133445555555
Q ss_pred HHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccccc
Q 012985 203 FLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (452)
Q Consensus 203 fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~ 262 (452)
+| +... .++++|+|+|+||..+-.+|.+.-+ .++|+++-++....
T Consensus 59 ~l----~~~~---~~~~~lvG~S~Gg~~a~~~a~~~p~--------~v~~~vl~~~~~~~ 103 (228)
T PF12697_consen 59 LL----DALG---IKKVILVGHSMGGMIALRLAARYPD--------RVKGLVLLSPPPPL 103 (228)
T ss_dssp HH----HHTT---TSSEEEEEETHHHHHHHHHHHHSGG--------GEEEEEEESESSSH
T ss_pred cc----cccc---ccccccccccccccccccccccccc--------ccccceeecccccc
Confidence 54 4443 3689999999999999888865322 58999998888764
No 20
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.59 E-value=0.00026 Score=73.02 Aligned_cols=133 Identities=19% Similarity=0.295 Sum_probs=81.3
Q ss_pred eEEEEEEecC--CCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCcccccc
Q 012985 105 ALFYYFVESP--QSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYS 182 (452)
Q Consensus 105 ~lFy~f~ea~--~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~ 182 (452)
.-.||+++++ .+|++||++|+++|| |.+.+.=|+.+.. -.+-|..-+...||.+|-..-. | .
T Consensus 105 ~~s~Wlvk~P~~~~pk~DpVlIYlHGG--------GY~l~~~p~qi~~-----L~~i~~~l~~~SILvLDYsLt~--~-~ 168 (374)
T PF10340_consen 105 SQSYWLVKAPNRFKPKSDPVLIYLHGG--------GYFLGTTPSQIEF-----LLNIYKLLPEVSILVLDYSLTS--S-D 168 (374)
T ss_pred cceEEEEeCCcccCCCCCcEEEEEcCC--------eeEecCCHHHHHH-----HHHHHHHcCCCeEEEEeccccc--c-c
Confidence 3479999974 358889999999998 4444444544311 1111222223489999954322 0 0
Q ss_pred CCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccccc
Q 012985 183 NTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (452)
Q Consensus 183 ~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~ 262 (452)
.....|+ . +..++.+..+...+.. ...++.+.|+|-||+-+-.+.+++.+.+ .... =|..++.+||+++
T Consensus 169 ~~~~~yP--t---QL~qlv~~Y~~Lv~~~---G~~nI~LmGDSAGGnL~Ls~LqyL~~~~--~~~~-Pk~~iLISPWv~l 237 (374)
T PF10340_consen 169 EHGHKYP--T---QLRQLVATYDYLVESE---GNKNIILMGDSAGGNLALSFLQYLKKPN--KLPY-PKSAILISPWVNL 237 (374)
T ss_pred cCCCcCc--h---HHHHHHHHHHHHHhcc---CCCeEEEEecCccHHHHHHHHHHHhhcC--CCCC-CceeEEECCCcCC
Confidence 0222333 1 2333333333333332 3468999999999999999999987655 1122 2788899999998
Q ss_pred cc
Q 012985 263 NL 264 (452)
Q Consensus 263 ~~ 264 (452)
..
T Consensus 238 ~~ 239 (374)
T PF10340_consen 238 VP 239 (374)
T ss_pred cC
Confidence 73
No 21
>PRK03204 haloalkane dehalogenase; Provisional
Probab=97.56 E-value=0.00072 Score=67.06 Aligned_cols=121 Identities=18% Similarity=0.324 Sum_probs=71.0
Q ss_pred eeEEEecCCCCceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEe
Q 012985 93 AGYLTVDPKAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLE 172 (452)
Q Consensus 93 sGyv~V~~~~~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiD 172 (452)
+.+++++ +..++|-- . . ..|.+|.|+|.|..+.. |-.+.+ .+.+..+++-+|
T Consensus 16 ~~~~~~~---~~~i~y~~--~--G--~~~~iv~lHG~~~~~~~-~~~~~~------------------~l~~~~~vi~~D 67 (286)
T PRK03204 16 SRWFDSS---RGRIHYID--E--G--TGPPILLCHGNPTWSFL-YRDIIV------------------ALRDRFRCVAPD 67 (286)
T ss_pred ceEEEcC---CcEEEEEE--C--C--CCCEEEEECCCCccHHH-HHHHHH------------------HHhCCcEEEEEC
Confidence 4577774 34566542 2 1 34789999999754444 433321 123458999999
Q ss_pred cCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeee
Q 012985 173 TPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKG 252 (452)
Q Consensus 173 qPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkG 252 (452)
.| |.|.|- ...+.. .+-+..|+++..++ +.. ...+++|+|+|+||..+-.+|..- .-.+++
T Consensus 68 ~~-G~G~S~--~~~~~~-~~~~~~~~~~~~~~----~~~---~~~~~~lvG~S~Gg~va~~~a~~~--------p~~v~~ 128 (286)
T PRK03204 68 YL-GFGLSE--RPSGFG-YQIDEHARVIGEFV----DHL---GLDRYLSMGQDWGGPISMAVAVER--------ADRVRG 128 (286)
T ss_pred CC-CCCCCC--CCCccc-cCHHHHHHHHHHHH----HHh---CCCCEEEEEECccHHHHHHHHHhC--------hhheeE
Confidence 87 666553 222211 12234455554444 433 346799999999998655554321 234889
Q ss_pred eEEecccc
Q 012985 253 IAIGNAWI 260 (452)
Q Consensus 253 I~IGNg~i 260 (452)
+++.++..
T Consensus 129 lvl~~~~~ 136 (286)
T PRK03204 129 VVLGNTWF 136 (286)
T ss_pred EEEECccc
Confidence 88887653
No 22
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=97.54 E-value=0.00054 Score=67.08 Aligned_cols=117 Identities=19% Similarity=0.147 Sum_probs=74.0
Q ss_pred CceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCcccccc
Q 012985 103 GRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYS 182 (452)
Q Consensus 103 ~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~ 182 (452)
+..+.|+..+. + +..|.||+++|-++.+.. |..+.+ .| .+..+|+.+|.| |-|.|
T Consensus 11 ~~~~~~~~~~~--~-~~~~plvllHG~~~~~~~-w~~~~~-----------~L-------~~~~~vi~~Dl~-G~G~S-- 65 (276)
T TIGR02240 11 GQSIRTAVRPG--K-EGLTPLLIFNGIGANLEL-VFPFIE-----------AL-------DPDLEVIAFDVP-GVGGS-- 65 (276)
T ss_pred CcEEEEEEecC--C-CCCCcEEEEeCCCcchHH-HHHHHH-----------Hh-------ccCceEEEECCC-CCCCC--
Confidence 45677876532 2 344678999996555555 543332 11 245799999987 55555
Q ss_pred CCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccccc
Q 012985 183 NTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWID 261 (452)
Q Consensus 183 ~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id 261 (452)
..... . .+-+..++++.+|+.. . .-++++|+|+|+||..+-.+|.+--+ .++++++.|+...
T Consensus 66 ~~~~~-~-~~~~~~~~~~~~~i~~----l---~~~~~~LvG~S~GG~va~~~a~~~p~--------~v~~lvl~~~~~~ 127 (276)
T TIGR02240 66 STPRH-P-YRFPGLAKLAARMLDY----L---DYGQVNAIGVSWGGALAQQFAHDYPE--------RCKKLILAATAAG 127 (276)
T ss_pred CCCCC-c-CcHHHHHHHHHHHHHH----h---CcCceEEEEECHHHHHHHHHHHHCHH--------HhhheEEeccCCc
Confidence 32211 1 1334455666665554 2 34689999999999988887764322 3899999888754
No 23
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=97.53 E-value=0.00033 Score=64.94 Aligned_cols=105 Identities=23% Similarity=0.346 Sum_probs=65.6
Q ss_pred CCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChhhHHH
Q 012985 120 KPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAED 199 (452)
Q Consensus 120 ~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d 199 (452)
+|+||.++|.+|.+.. |-.+.+ .| + +-.+|+-+|.| |.|.|-. .......+.++.+++
T Consensus 1 ~~~vv~~hG~~~~~~~-~~~~~~-----------~L-----~--~~~~v~~~d~~-g~G~s~~--~~~~~~~~~~~~~~~ 58 (251)
T TIGR03695 1 KPVLVFLHGFLGSGAD-WQALIE-----------LL-----G--PHFRCLAIDLP-GHGSSQS--PDEIERYDFEEAAQD 58 (251)
T ss_pred CCEEEEEcCCCCchhh-HHHHHH-----------Hh-----c--ccCeEEEEcCC-CCCCCCC--CCccChhhHHHHHHH
Confidence 4889999998877766 533321 11 1 34789999977 6666633 221111133334444
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccc
Q 012985 200 SYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWI 260 (452)
Q Consensus 200 ~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~i 260 (452)
++..+.+++ ..++++|+|+|+||..+..+|.+.- -.++++++.++..
T Consensus 59 ---~~~~~~~~~---~~~~~~l~G~S~Gg~ia~~~a~~~~--------~~v~~lil~~~~~ 105 (251)
T TIGR03695 59 ---ILATLLDQL---GIEPFFLVGYSMGGRIALYYALQYP--------ERVQGLILESGSP 105 (251)
T ss_pred ---HHHHHHHHc---CCCeEEEEEeccHHHHHHHHHHhCc--------hheeeeEEecCCC
Confidence 233444444 3578999999999998888887532 2478888876643
No 24
>PRK03592 haloalkane dehalogenase; Provisional
Probab=97.52 E-value=0.00057 Score=67.52 Aligned_cols=115 Identities=19% Similarity=0.250 Sum_probs=75.7
Q ss_pred CceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCcccccc
Q 012985 103 GRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYS 182 (452)
Q Consensus 103 ~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~ 182 (452)
+..++|.-. .+.|.||+++|.|+.+.. +-.+.+ .| .+...|+-+|.| |-|+|--
T Consensus 16 g~~i~y~~~------G~g~~vvllHG~~~~~~~-w~~~~~-----------~L-------~~~~~via~D~~-G~G~S~~ 69 (295)
T PRK03592 16 GSRMAYIET------GEGDPIVFLHGNPTSSYL-WRNIIP-----------HL-------AGLGRCLAPDLI-GMGASDK 69 (295)
T ss_pred CEEEEEEEe------CCCCEEEEECCCCCCHHH-HHHHHH-----------HH-------hhCCEEEEEcCC-CCCCCCC
Confidence 456666532 134789999999988877 544432 12 233489999987 6666632
Q ss_pred CCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccccc
Q 012985 183 NTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (452)
Q Consensus 183 ~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~ 262 (452)
. ..++ +....|+|+..++.. . ...+++|+|+|.||.++-.+|.+--+ .++++++.|+...+
T Consensus 70 ~-~~~~---~~~~~a~dl~~ll~~----l---~~~~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lil~~~~~~~ 130 (295)
T PRK03592 70 P-DIDY---TFADHARYLDAWFDA----L---GLDDVVLVGHDWGSALGFDWAARHPD--------RVRGIAFMEAIVRP 130 (295)
T ss_pred C-CCCC---CHHHHHHHHHHHHHH----h---CCCCeEEEEECHHHHHHHHHHHhChh--------heeEEEEECCCCCC
Confidence 2 1222 445566776666654 2 34689999999999888877765433 38999999985544
No 25
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=97.50 E-value=0.00095 Score=69.85 Aligned_cols=129 Identities=21% Similarity=0.199 Sum_probs=83.1
Q ss_pred CCCceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCcccc
Q 012985 101 KAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFS 180 (452)
Q Consensus 101 ~~~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfS 180 (452)
..+..+|+..++... .+.+|+||+++|.++.+.. |-.+.+ .+. .+-.+|+-+|.| |-|.|
T Consensus 118 ~~~~~l~~~~~~p~~-~~~~~~Vl~lHG~~~~~~~-~~~~a~-----------~L~------~~Gy~V~~~D~r-GhG~S 177 (395)
T PLN02652 118 ARRNALFCRSWAPAA-GEMRGILIIIHGLNEHSGR-YLHFAK-----------QLT------SCGFGVYAMDWI-GHGGS 177 (395)
T ss_pred CCCCEEEEEEecCCC-CCCceEEEEECCchHHHHH-HHHHHH-----------HHH------HCCCEEEEeCCC-CCCCC
Confidence 345688888776642 3457899999998776554 433332 011 134689999987 55555
Q ss_pred ccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccc
Q 012985 181 YSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWI 260 (452)
Q Consensus 181 y~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~i 260 (452)
-. ...+. .+.+..++|+..+++..-..+| ..+++|+|+|+||..+..++. +. +..-.++|+++.+|++
T Consensus 178 ~~--~~~~~-~~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~----~p--~~~~~v~glVL~sP~l 245 (395)
T PLN02652 178 DG--LHGYV-PSLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAAS----YP--SIEDKLEGIVLTSPAL 245 (395)
T ss_pred CC--CCCCC-cCHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHh----cc--CcccccceEEEECccc
Confidence 32 22222 1444567888888887666665 458999999999987765442 11 1122588999988876
Q ss_pred c
Q 012985 261 D 261 (452)
Q Consensus 261 d 261 (452)
+
T Consensus 246 ~ 246 (395)
T PLN02652 246 R 246 (395)
T ss_pred c
Confidence 4
No 26
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=97.49 E-value=0.00036 Score=66.29 Aligned_cols=100 Identities=21% Similarity=0.255 Sum_probs=65.5
Q ss_pred CCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChhhHHH
Q 012985 120 KPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAED 199 (452)
Q Consensus 120 ~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d 199 (452)
+|.||+++|.||++.. |-.+.+ .. +..+++.+|-| |-|.|. .... .+-+..|++
T Consensus 2 ~p~vvllHG~~~~~~~-w~~~~~----------------~l---~~~~vi~~D~~-G~G~S~--~~~~---~~~~~~~~~ 55 (242)
T PRK11126 2 LPWLVFLHGLLGSGQD-WQPVGE----------------AL---PDYPRLYIDLP-GHGGSA--AISV---DGFADVSRL 55 (242)
T ss_pred CCEEEEECCCCCChHH-HHHHHH----------------Hc---CCCCEEEecCC-CCCCCC--Cccc---cCHHHHHHH
Confidence 5889999999888776 644431 11 24899999977 555553 2221 133455666
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccc
Q 012985 200 SYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (452)
Q Consensus 200 ~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~ 259 (452)
+.++|. . +...+++++|+|+||..+-.+|.+.... .++++++.++.
T Consensus 56 l~~~l~----~---~~~~~~~lvG~S~Gg~va~~~a~~~~~~-------~v~~lvl~~~~ 101 (242)
T PRK11126 56 LSQTLQ----S---YNILPYWLVGYSLGGRIAMYYACQGLAG-------GLCGLIVEGGN 101 (242)
T ss_pred HHHHHH----H---cCCCCeEEEEECHHHHHHHHHHHhCCcc-------cccEEEEeCCC
Confidence 665554 2 3457999999999998888887652111 27788887654
No 27
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=97.43 E-value=0.00052 Score=75.87 Aligned_cols=141 Identities=19% Similarity=0.228 Sum_probs=87.8
Q ss_pred EEEecCCCCceEEEEEEecCC-CCC-CCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEe
Q 012985 95 YLTVDPKAGRALFYYFVESPQ-SSS-SKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLE 172 (452)
Q Consensus 95 yv~V~~~~~~~lFy~f~ea~~-~~~-~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiD 172 (452)
++.+....|..+..|++.... ++. .-|++++++||| ++. +|. ..+.. -..=+.+-+.||+++
T Consensus 367 ~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~-~~~-------~~~~~------~q~~~~~G~~V~~~n 430 (620)
T COG1506 367 PVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQ-VGY-------SFNPE------IQVLASAGYAVLAPN 430 (620)
T ss_pred EEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCC--ccc-ccc-------ccchh------hHHHhcCCeEEEEeC
Confidence 344444457788899887653 332 359999999999 444 331 11100 012235678999999
Q ss_pred cCCCcc-ccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeee
Q 012985 173 TPAGVG-FSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLK 251 (452)
Q Consensus 173 qPvGvG-fSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLk 251 (452)
|-|++ |+..=........+. ...+|+..++. |+++.|.....++.|+|.||||.. +..++.+. . -+|
T Consensus 431 -~RGS~GyG~~F~~~~~~~~g~-~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGym----tl~~~~~~----~-~f~ 498 (620)
T COG1506 431 -YRGSTGYGREFADAIRGDWGG-VDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYM----TLLAATKT----P-RFK 498 (620)
T ss_pred -CCCCCccHHHHHHhhhhccCC-ccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHH----HHHHHhcC----c-hhh
Confidence 56554 432201111111122 35789999999 999999888889999999999954 44444442 2 477
Q ss_pred eeEEeccccccc
Q 012985 252 GIAIGNAWIDDN 263 (452)
Q Consensus 252 GI~IGNg~id~~ 263 (452)
..+...+.++..
T Consensus 499 a~~~~~~~~~~~ 510 (620)
T COG1506 499 AAVAVAGGVDWL 510 (620)
T ss_pred eEEeccCcchhh
Confidence 777777766654
No 28
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.38 E-value=0.0012 Score=69.57 Aligned_cols=122 Identities=19% Similarity=0.208 Sum_probs=74.1
Q ss_pred CceEEEEEEecCCCCCCCCeEEEECCCCChhh--hhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCcccc
Q 012985 103 GRALFYYFVESPQSSSSKPLVLWLNGGPGCSS--LGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFS 180 (452)
Q Consensus 103 ~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS--~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfS 180 (452)
+..|.-|++... ..+..|+||. .||.++.. . +..+.+ .+ -.+-.+||-+|.| |.|.|
T Consensus 178 g~~l~g~l~~P~-~~~~~P~Vli-~gG~~~~~~~~-~~~~~~-----------~L------a~~Gy~vl~~D~p-G~G~s 236 (414)
T PRK05077 178 GGPITGFLHLPK-GDGPFPTVLV-CGGLDSLQTDY-YRLFRD-----------YL------APRGIAMLTIDMP-SVGFS 236 (414)
T ss_pred CcEEEEEEEECC-CCCCccEEEE-eCCcccchhhh-HHHHHH-----------HH------HhCCCEEEEECCC-CCCCC
Confidence 335555555433 3356798885 56666532 2 222210 01 1223789999999 88887
Q ss_pred ccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccc
Q 012985 181 YSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWI 260 (452)
Q Consensus 181 y~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~i 260 (452)
-... .. . ........+..|+...|.....++.|+|.|+||.+++.+|..-. -.++++++.+|.+
T Consensus 237 ~~~~---~~--~---d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p--------~ri~a~V~~~~~~ 300 (414)
T PRK05077 237 SKWK---LT--Q---DSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEP--------PRLKAVACLGPVV 300 (414)
T ss_pred CCCC---cc--c---cHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCC--------cCceEEEEECCcc
Confidence 4321 10 1 12223344556677777777789999999999999999885421 1378888877775
Q ss_pred c
Q 012985 261 D 261 (452)
Q Consensus 261 d 261 (452)
+
T Consensus 301 ~ 301 (414)
T PRK05077 301 H 301 (414)
T ss_pred c
Confidence 4
No 29
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=97.34 E-value=0.002 Score=67.49 Aligned_cols=119 Identities=13% Similarity=0.157 Sum_probs=71.8
Q ss_pred eEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCC
Q 012985 105 ALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNT 184 (452)
Q Consensus 105 ~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~ 184 (452)
.+.+..++. +.++|.||+|+|.++.+.. +....+ .| .+..+|+.+|.| |-|.| ..
T Consensus 93 ~~~~~~~~~---~~~~p~vvllHG~~~~~~~-~~~~~~-----------~L-------~~~~~vi~~D~r-G~G~S--~~ 147 (402)
T PLN02894 93 FINTVTFDS---KEDAPTLVMVHGYGASQGF-FFRNFD-----------AL-------ASRFRVIAIDQL-GWGGS--SR 147 (402)
T ss_pred eEEEEEecC---CCCCCEEEEECCCCcchhH-HHHHHH-----------HH-------HhCCEEEEECCC-CCCCC--CC
Confidence 444444432 2467999999998776655 322110 12 234789999987 55555 22
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccc
Q 012985 185 SSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWI 260 (452)
Q Consensus 185 ~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~i 260 (452)
.. +.....++..+.+.+.+..|.+.. ...+++|+|+|+||..+-.+|..- .-.++++++.++..
T Consensus 148 ~~-~~~~~~~~~~~~~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~--------p~~v~~lvl~~p~~ 211 (402)
T PLN02894 148 PD-FTCKSTEETEAWFIDSFEEWRKAK---NLSNFILLGHSFGGYVAAKYALKH--------PEHVQHLILVGPAG 211 (402)
T ss_pred CC-cccccHHHHHHHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhC--------chhhcEEEEECCcc
Confidence 21 211122333444566666776644 345899999999998777766542 23478888877653
No 30
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=97.21 E-value=0.0022 Score=65.96 Aligned_cols=104 Identities=18% Similarity=0.121 Sum_probs=65.0
Q ss_pred CCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChhhHH
Q 012985 119 SKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAE 198 (452)
Q Consensus 119 ~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~ 198 (452)
+.|.||.|+|.++.+.. |..+.+ . ..+...|+.+|.| |-|.| ....+.. .+-+..|+
T Consensus 87 ~gp~lvllHG~~~~~~~-w~~~~~-----------~-------L~~~~~via~Dl~-G~G~S--~~~~~~~-~~~~~~a~ 143 (360)
T PLN02679 87 SGPPVLLVHGFGASIPH-WRRNIG-----------V-------LAKNYTVYAIDLL-GFGAS--DKPPGFS-YTMETWAE 143 (360)
T ss_pred CCCeEEEECCCCCCHHH-HHHHHH-----------H-------HhcCCEEEEECCC-CCCCC--CCCCCcc-ccHHHHHH
Confidence 45788999999887776 544432 1 1234789999988 55554 3322211 13355667
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccc
Q 012985 199 DSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (452)
Q Consensus 199 d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~ 259 (452)
++..||.. +...+++|+|+|+||..+-.+|..- . +=.++|+++.|+.
T Consensus 144 ~l~~~l~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~---~----P~rV~~LVLi~~~ 190 (360)
T PLN02679 144 LILDFLEE-------VVQKPTVLIGNSVGSLACVIAASES---T----RDLVRGLVLLNCA 190 (360)
T ss_pred HHHHHHHH-------hcCCCeEEEEECHHHHHHHHHHHhc---C----hhhcCEEEEECCc
Confidence 77666653 2346899999999996655544321 1 1137888888764
No 31
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=97.19 E-value=0.0022 Score=59.61 Aligned_cols=102 Identities=17% Similarity=0.211 Sum_probs=63.6
Q ss_pred CCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChhhH
Q 012985 118 SSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTA 197 (452)
Q Consensus 118 ~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A 197 (452)
+.+|++|.++|-++.+.. +..+.|. | .+..+++.+|.| |.|.|-.. ... .+.++.+
T Consensus 11 ~~~~~li~~hg~~~~~~~-~~~~~~~-----------l-------~~~~~v~~~d~~-G~G~s~~~-~~~---~~~~~~~ 66 (251)
T TIGR02427 11 DGAPVLVFINSLGTDLRM-WDPVLPA-----------L-------TPDFRVLRYDKR-GHGLSDAP-EGP---YSIEDLA 66 (251)
T ss_pred CCCCeEEEEcCcccchhh-HHHHHHH-----------h-------hcccEEEEecCC-CCCCCCCC-CCC---CCHHHHH
Confidence 367999999986444444 4434321 1 134699999987 66665321 111 2445567
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecc
Q 012985 198 EDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNA 258 (452)
Q Consensus 198 ~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg 258 (452)
+++.++++. . ...+++|+|+|+||..+-.+|..-.+ .++++++.++
T Consensus 67 ~~~~~~i~~----~---~~~~v~liG~S~Gg~~a~~~a~~~p~--------~v~~li~~~~ 112 (251)
T TIGR02427 67 DDVLALLDH----L---GIERAVFCGLSLGGLIAQGLAARRPD--------RVRALVLSNT 112 (251)
T ss_pred HHHHHHHHH----h---CCCceEEEEeCchHHHHHHHHHHCHH--------HhHHHhhccC
Confidence 777666653 2 34579999999999988888765322 2566665543
No 32
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=97.17 E-value=0.0024 Score=62.10 Aligned_cols=106 Identities=13% Similarity=0.113 Sum_probs=61.4
Q ss_pred CCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChhhHH
Q 012985 119 SKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAE 198 (452)
Q Consensus 119 ~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~ 198 (452)
+.|.||+|+|.++.+.. +..+... +. .-..+..+|+-+|.| |-|.|-... .+.. .....++
T Consensus 29 ~~~~ivllHG~~~~~~~-~~~~~~~-----------~~---~l~~~~~~vi~~D~~-G~G~S~~~~-~~~~--~~~~~~~ 89 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGG-WSNYYRN-----------IG---PFVDAGYRVILKDSP-GFNKSDAVV-MDEQ--RGLVNAR 89 (282)
T ss_pred CCCeEEEECCCCCchhh-HHHHHHH-----------HH---HHHhCCCEEEEECCC-CCCCCCCCc-Cccc--ccchhHH
Confidence 34779999997554433 3211100 00 001234899999987 666653221 1111 1113456
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecc
Q 012985 199 DSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNA 258 (452)
Q Consensus 199 d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg 258 (452)
++.++++. . ..++++++|+|+||..+-.+|.+--+. ++++++.++
T Consensus 90 ~l~~~l~~----l---~~~~~~lvG~S~Gg~ia~~~a~~~p~~--------v~~lvl~~~ 134 (282)
T TIGR03343 90 AVKGLMDA----L---DIEKAHLVGNSMGGATALNFALEYPDR--------IGKLILMGP 134 (282)
T ss_pred HHHHHHHH----c---CCCCeeEEEECchHHHHHHHHHhChHh--------hceEEEECC
Confidence 66555543 2 456899999999999999988754332 667776655
No 33
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=97.16 E-value=0.0032 Score=65.70 Aligned_cols=131 Identities=18% Similarity=0.121 Sum_probs=77.9
Q ss_pred ceeEeeEEEecCCCCceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCcccccee
Q 012985 89 FDQYAGYLTVDPKAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANV 168 (452)
Q Consensus 89 ~~~ysGyv~V~~~~~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anv 168 (452)
+++-+|+... .++-.+||. +. .+...|.||.|+|.|+.+.. |-.+.+ .| .+..+|
T Consensus 102 ~~~~~~~~~~--~~~~~~~y~--~~--G~~~~~~ivllHG~~~~~~~-w~~~~~-----------~L-------~~~~~V 156 (383)
T PLN03084 102 LKMGAQSQAS--SDLFRWFCV--ES--GSNNNPPVLLIHGFPSQAYS-YRKVLP-----------VL-------SKNYHA 156 (383)
T ss_pred ccccceeEEc--CCceEEEEE--ec--CCCCCCeEEEECCCCCCHHH-HHHHHH-----------HH-------hcCCEE
Confidence 4444555553 235566655 22 34456899999999877766 544432 12 234799
Q ss_pred EEEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCcee
Q 012985 169 LFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTII 248 (452)
Q Consensus 169 lfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~i 248 (452)
+-+|.| |-|+|.......-...+-++.++++..|++. . ...+++|+|+|+||..+-.+|..- +-
T Consensus 157 ia~Dlp-G~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~----l---~~~~~~LvG~s~GG~ia~~~a~~~--------P~ 220 (383)
T PLN03084 157 IAFDWL-GFGFSDKPQPGYGFNYTLDEYVSSLESLIDE----L---KSDKVSLVVQGYFSPPVVKYASAH--------PD 220 (383)
T ss_pred EEECCC-CCCCCCCCcccccccCCHHHHHHHHHHHHHH----h---CCCCceEEEECHHHHHHHHHHHhC--------hH
Confidence 999987 6666643221100001334556666666654 2 345799999999996554444321 22
Q ss_pred eeeeeEEecccc
Q 012985 249 NLKGIAIGNAWI 260 (452)
Q Consensus 249 nLkGI~IGNg~i 260 (452)
.++++++.|+..
T Consensus 221 ~v~~lILi~~~~ 232 (383)
T PLN03084 221 KIKKLILLNPPL 232 (383)
T ss_pred hhcEEEEECCCC
Confidence 389999988764
No 34
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=97.13 E-value=0.0023 Score=60.56 Aligned_cols=116 Identities=17% Similarity=0.116 Sum_probs=59.9
Q ss_pred CCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCCCCCC----CC
Q 012985 117 SSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSN----PG 192 (452)
Q Consensus 117 ~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~----~~ 192 (452)
.+..|+|++|+|+++..+. +....+ +. .+- + ..-+.||..|.| |.|.+ ...-++.. ..
T Consensus 10 ~~~~P~vv~lHG~~~~~~~-~~~~~~---~~------~~a-~----~~g~~Vv~Pd~~-g~~~~--~~~~~~~~~~~~~~ 71 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASA-YVIDWG---WK------AAA-D----RYGFVLVAPEQT-SYNSS--NNCWDWFFTHHRAR 71 (212)
T ss_pred CCCCCEEEEeCCCCCCHHH-HhhhcC---hH------HHH-H----hCCeEEEecCCc-Ccccc--CCCCCCCCccccCC
Confidence 4568999999999876654 221000 00 000 0 123567777876 22221 11101000 01
Q ss_pred ChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccc
Q 012985 193 DNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (452)
Q Consensus 193 ~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~ 259 (452)
......++..++....++++ ....+++|+|+|.||..+-.+|.. + .-.+.++++..|.
T Consensus 72 ~~~~~~~~~~~i~~~~~~~~-id~~~i~l~G~S~Gg~~a~~~a~~---~-----p~~~~~~~~~~g~ 129 (212)
T TIGR01840 72 GTGEVESLHQLIDAVKANYS-IDPNRVYVTGLSAGGGMTAVLGCT---Y-----PDVFAGGASNAGL 129 (212)
T ss_pred CCccHHHHHHHHHHHHHhcC-cChhheEEEEECHHHHHHHHHHHh---C-----chhheEEEeecCC
Confidence 11234455555555445543 344689999999999876666543 1 1125666665544
No 35
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=97.12 E-value=0.0024 Score=63.10 Aligned_cols=106 Identities=17% Similarity=0.168 Sum_probs=65.4
Q ss_pred CCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChhhH
Q 012985 118 SSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTA 197 (452)
Q Consensus 118 ~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A 197 (452)
.++|.||+++|..+.++. |..+.+ .|.. +-.+++-+|.| |.|.|...... . .+-++.+
T Consensus 16 ~~~p~vvliHG~~~~~~~-w~~~~~-----------~L~~------~g~~vi~~dl~-g~G~s~~~~~~-~--~~~~~~~ 73 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWC-WYKIRC-----------LMEN------SGYKVTCIDLK-SAGIDQSDADS-V--TTFDEYN 73 (273)
T ss_pred CCCCeEEEECCCCCCcCc-HHHHHH-----------HHHh------CCCEEEEeccc-CCCCCCCCccc-C--CCHHHHH
Confidence 678999999998666665 543331 1211 23689999998 66665332111 1 1334455
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccc
Q 012985 198 EDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (452)
Q Consensus 198 ~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~ 259 (452)
+++.+++ +... ..++++|+|+||||..+-.++...-+ .++++++.++.
T Consensus 74 ~~l~~~i----~~l~--~~~~v~lvGhS~GG~v~~~~a~~~p~--------~v~~lv~~~~~ 121 (273)
T PLN02211 74 KPLIDFL----SSLP--ENEKVILVGHSAGGLSVTQAIHRFPK--------KICLAVYVAAT 121 (273)
T ss_pred HHHHHHH----HhcC--CCCCEEEEEECchHHHHHHHHHhChh--------heeEEEEeccc
Confidence 5555444 4432 24789999999999988777754322 26777776554
No 36
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=97.12 E-value=0.0057 Score=61.75 Aligned_cols=140 Identities=17% Similarity=0.146 Sum_probs=90.2
Q ss_pred ceeEeeEEEecCCCCceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCcccccee
Q 012985 89 FDQYAGYLTVDPKAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANV 168 (452)
Q Consensus 89 ~~~ysGyv~V~~~~~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anv 168 (452)
.....+|++++. +++++.|. .+++.|++|.|+|=|=.+=. += + +...|.. +-..+
T Consensus 20 ~~~~hk~~~~~g-----I~~h~~e~--g~~~gP~illlHGfPe~wys-wr-~----------q~~~la~------~~~rv 74 (322)
T KOG4178|consen 20 SAISHKFVTYKG-----IRLHYVEG--GPGDGPIVLLLHGFPESWYS-WR-H----------QIPGLAS------RGYRV 74 (322)
T ss_pred hhcceeeEEEcc-----EEEEEEee--cCCCCCEEEEEccCCccchh-hh-h----------hhhhhhh------cceEE
Confidence 456678888852 78888888 78899999999998876554 20 0 0011111 12679
Q ss_pred EEEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCcee
Q 012985 169 LFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTII 248 (452)
Q Consensus 169 lfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~i 248 (452)
+.+|.+ |-|+|-.... ....+-...+.|+..+|.. +...++++.|++||+..+=.+|..--++. ...+
T Consensus 75 iA~Dlr-GyG~Sd~P~~--~~~Yt~~~l~~di~~lld~-------Lg~~k~~lvgHDwGaivaw~la~~~Perv--~~lv 142 (322)
T KOG4178|consen 75 IAPDLR-GYGFSDAPPH--ISEYTIDELVGDIVALLDH-------LGLKKAFLVGHDWGAIVAWRLALFYPERV--DGLV 142 (322)
T ss_pred EecCCC-CCCCCCCCCC--cceeeHHHHHHHHHHHHHH-------hccceeEEEeccchhHHHHHHHHhChhhc--ceEE
Confidence 999986 5555543333 1112455677777776663 23678999999999998888887665553 2244
Q ss_pred eeeeeEEecccccccccc
Q 012985 249 NLKGIAIGNAWIDDNLCT 266 (452)
Q Consensus 249 nLkGI~IGNg~id~~~~~ 266 (452)
++.+... ||..+|....
T Consensus 143 ~~nv~~~-~p~~~~~~~~ 159 (322)
T KOG4178|consen 143 TLNVPFP-NPKLKPLDSS 159 (322)
T ss_pred EecCCCC-Ccccchhhhh
Confidence 5555544 6777765543
No 37
>PRK10349 carboxylesterase BioH; Provisional
Probab=97.07 E-value=0.002 Score=62.02 Aligned_cols=94 Identities=16% Similarity=0.158 Sum_probs=61.4
Q ss_pred CeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChhhHHHH
Q 012985 121 PLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDS 200 (452)
Q Consensus 121 Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~ 200 (452)
|.||.|+|.++++.. |-.+.+ .+.+..+|+.+|.| |.|.|-. ...+ +.++.++++
T Consensus 14 ~~ivllHG~~~~~~~-w~~~~~------------------~L~~~~~vi~~Dl~-G~G~S~~--~~~~---~~~~~~~~l 68 (256)
T PRK10349 14 VHLVLLHGWGLNAEV-WRCIDE------------------ELSSHFTLHLVDLP-GFGRSRG--FGAL---SLADMAEAV 68 (256)
T ss_pred CeEEEECCCCCChhH-HHHHHH------------------HHhcCCEEEEecCC-CCCCCCC--CCCC---CHHHHHHHH
Confidence 569999998777777 543332 12356899999987 6666642 2211 333444443
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecc
Q 012985 201 YTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNA 258 (452)
Q Consensus 201 ~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg 258 (452)
.+ +...+++++|+|+||..+..+|..- +-.++++++.|+
T Consensus 69 ~~-----------~~~~~~~lvGhS~Gg~ia~~~a~~~--------p~~v~~lili~~ 107 (256)
T PRK10349 69 LQ-----------QAPDKAIWLGWSLGGLVASQIALTH--------PERVQALVTVAS 107 (256)
T ss_pred Hh-----------cCCCCeEEEEECHHHHHHHHHHHhC--------hHhhheEEEecC
Confidence 32 1236899999999999888887542 224788888766
No 38
>PRK10749 lysophospholipase L2; Provisional
Probab=97.01 E-value=0.0042 Score=62.95 Aligned_cols=127 Identities=14% Similarity=0.099 Sum_probs=78.4
Q ss_pred CCceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccc
Q 012985 102 AGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSY 181 (452)
Q Consensus 102 ~~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy 181 (452)
.|..++|+.++.. ..+|+||.++|-.+.+.. |..+. +. +. .+-.+|+-+|.| |-|.|-
T Consensus 39 ~g~~l~~~~~~~~---~~~~~vll~HG~~~~~~~-y~~~~---~~--------l~------~~g~~v~~~D~~-G~G~S~ 96 (330)
T PRK10749 39 DDIPIRFVRFRAP---HHDRVVVICPGRIESYVK-YAELA---YD--------LF------HLGYDVLIIDHR-GQGRSG 96 (330)
T ss_pred CCCEEEEEEccCC---CCCcEEEEECCccchHHH-HHHHH---HH--------HH------HCCCeEEEEcCC-CCCCCC
Confidence 3567888877642 456899999997554433 43322 11 10 134689999986 777764
Q ss_pred cCCCCCC--CCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccc
Q 012985 182 SNTSSDY--SNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (452)
Q Consensus 182 ~~~~~~~--~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~ 259 (452)
....... ...+-+..++|+..+++...+.+ ...+++++|+|+||..+-.+|.. . .-.++|+++.+|.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~~~~l~GhSmGG~ia~~~a~~---~-----p~~v~~lvl~~p~ 165 (330)
T PRK10749 97 RLLDDPHRGHVERFNDYVDDLAAFWQQEIQPG---PYRKRYALAHSMGGAILTLFLQR---H-----PGVFDAIALCAPM 165 (330)
T ss_pred CCCCCCCcCccccHHHHHHHHHHHHHHHHhcC---CCCCeEEEEEcHHHHHHHHHHHh---C-----CCCcceEEEECch
Confidence 2211100 00133456777777777654433 35789999999999877666643 2 1237899998876
Q ss_pred cc
Q 012985 260 ID 261 (452)
Q Consensus 260 id 261 (452)
..
T Consensus 166 ~~ 167 (330)
T PRK10749 166 FG 167 (330)
T ss_pred hc
Confidence 54
No 39
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=97.00 E-value=0.0048 Score=62.64 Aligned_cols=104 Identities=17% Similarity=0.151 Sum_probs=65.7
Q ss_pred CCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChhh
Q 012985 117 SSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNT 196 (452)
Q Consensus 117 ~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~ 196 (452)
+.+.|.+|+++|.+|.+.. |..+.+ .|. +..+++-+|.| |.|.|-... . ..+..+.
T Consensus 128 ~~~~~~vl~~HG~~~~~~~-~~~~~~-----------~l~-------~~~~v~~~d~~-g~G~s~~~~-~---~~~~~~~ 183 (371)
T PRK14875 128 EGDGTPVVLIHGFGGDLNN-WLFNHA-----------ALA-------AGRPVIALDLP-GHGASSKAV-G---AGSLDEL 183 (371)
T ss_pred CCCCCeEEEECCCCCccch-HHHHHH-----------HHh-------cCCEEEEEcCC-CCCCCCCCC-C---CCCHHHH
Confidence 3456889999998887776 554442 121 23689999987 777663211 1 1133444
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccc
Q 012985 197 AEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (452)
Q Consensus 197 A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~ 259 (452)
++++..++ +.+ ...+++|.|+|+||..+..+|..- .-.++++++.++.
T Consensus 184 ~~~~~~~~----~~~---~~~~~~lvG~S~Gg~~a~~~a~~~--------~~~v~~lv~~~~~ 231 (371)
T PRK14875 184 AAAVLAFL----DAL---GIERAHLVGHSMGGAVALRLAARA--------PQRVASLTLIAPA 231 (371)
T ss_pred HHHHHHHH----Hhc---CCccEEEEeechHHHHHHHHHHhC--------chheeEEEEECcC
Confidence 55554444 433 346899999999999998888652 1236777766553
No 40
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=96.94 E-value=0.0024 Score=59.27 Aligned_cols=96 Identities=15% Similarity=0.138 Sum_probs=58.2
Q ss_pred CCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChhhHHH
Q 012985 120 KPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAED 199 (452)
Q Consensus 120 ~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d 199 (452)
+|.||+++|.++.+.. |-.+.+ .| .+..+|+.+|.| |-|.|- ...++ +-++.+++
T Consensus 4 ~~~iv~~HG~~~~~~~-~~~~~~-----------~l-------~~~~~vi~~d~~-G~G~s~--~~~~~---~~~~~~~~ 58 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEV-FRCLDE-----------EL-------SAHFTLHLVDLP-GHGRSR--GFGPL---SLADAAEA 58 (245)
T ss_pred CceEEEEcCCCCchhh-HHHHHH-----------hh-------ccCeEEEEecCC-cCccCC--CCCCc---CHHHHHHH
Confidence 4889999997665555 433321 11 134789999987 555543 22111 22333333
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccc
Q 012985 200 SYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (452)
Q Consensus 200 ~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~ 259 (452)
+.+ .. ..+++++|+|+||..+..+|.+--+ .++++++.++.
T Consensus 59 ~~~-------~~----~~~~~lvG~S~Gg~~a~~~a~~~p~--------~v~~~il~~~~ 99 (245)
T TIGR01738 59 IAA-------QA----PDPAIWLGWSLGGLVALHIAATHPD--------RVRALVTVASS 99 (245)
T ss_pred HHH-------hC----CCCeEEEEEcHHHHHHHHHHHHCHH--------hhheeeEecCC
Confidence 322 11 2589999999999988888764322 26787776654
No 41
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=96.90 E-value=0.0061 Score=65.37 Aligned_cols=134 Identities=18% Similarity=0.197 Sum_probs=80.3
Q ss_pred CceeEeeEEEecCCCCceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhh-hhhcCCeeEcCCCCccccCCCCccccc
Q 012985 88 DFDQYAGYLTVDPKAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGA-MEELGPFRVNSDGKTLYRNEYAWNNVA 166 (452)
Q Consensus 88 ~~~~ysGyv~V~~~~~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~-~~E~GP~~v~~~~~~l~~N~~sW~~~a 166 (452)
..+.-.-|++.+ +..|||....... +..+|.||+|+|.+|.+.. |.. +.+ .+.. .+.+..
T Consensus 173 ~~~~~~~~~~~~---~~~l~~~~~gp~~-~~~k~~VVLlHG~~~s~~~-W~~~~~~-----------~L~~---~~~~~y 233 (481)
T PLN03087 173 DCKFCTSWLSSS---NESLFVHVQQPKD-NKAKEDVLFIHGFISSSAF-WTETLFP-----------NFSD---AAKSTY 233 (481)
T ss_pred ccceeeeeEeeC---CeEEEEEEecCCC-CCCCCeEEEECCCCccHHH-HHHHHHH-----------HHHH---HhhCCC
Confidence 344455778764 3678888665432 2345789999999888776 542 110 0111 134567
Q ss_pred eeEEEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCc
Q 012985 167 NVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKT 246 (452)
Q Consensus 167 nvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~ 246 (452)
.++-+|.| |-|-| ....+.. .+.++.++++. +.+++.. ...+++|+|+|+||..+-.+|.+--+
T Consensus 234 rVia~Dl~-G~G~S--~~p~~~~-ytl~~~a~~l~---~~ll~~l---g~~k~~LVGhSmGG~iAl~~A~~~Pe------ 297 (481)
T PLN03087 234 RLFAVDLL-GFGRS--PKPADSL-YTLREHLEMIE---RSVLERY---KVKSFHIVAHSLGCILALALAVKHPG------ 297 (481)
T ss_pred EEEEECCC-CCCCC--cCCCCCc-CCHHHHHHHHH---HHHHHHc---CCCCEEEEEECHHHHHHHHHHHhChH------
Confidence 99999988 54544 3322111 13333344442 2344443 35689999999999988888765322
Q ss_pred eeeeeeeEEecc
Q 012985 247 IINLKGIAIGNA 258 (452)
Q Consensus 247 ~inLkGI~IGNg 258 (452)
.++++++.++
T Consensus 298 --~V~~LVLi~~ 307 (481)
T PLN03087 298 --AVKSLTLLAP 307 (481)
T ss_pred --hccEEEEECC
Confidence 2788888775
No 42
>PLN02965 Probable pheophorbidase
Probab=96.85 E-value=0.0041 Score=60.14 Aligned_cols=101 Identities=12% Similarity=0.213 Sum_probs=62.6
Q ss_pred EEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChhhHHHHHH
Q 012985 123 VLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYT 202 (452)
Q Consensus 123 ~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~ 202 (452)
||.++|.++.+.. |-...+ .|. .+...|+-+|.| |.|.|-...... .+.+..|+|+..
T Consensus 6 vvllHG~~~~~~~-w~~~~~-----------~L~------~~~~~via~Dl~-G~G~S~~~~~~~---~~~~~~a~dl~~ 63 (255)
T PLN02965 6 FVFVHGASHGAWC-WYKLAT-----------LLD------AAGFKSTCVDLT-GAGISLTDSNTV---SSSDQYNRPLFA 63 (255)
T ss_pred EEEECCCCCCcCc-HHHHHH-----------HHh------hCCceEEEecCC-cCCCCCCCcccc---CCHHHHHHHHHH
Confidence 8889998755545 432221 111 234689999987 666663221111 134556666666
Q ss_pred HHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccc
Q 012985 203 FLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (452)
Q Consensus 203 fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~ 259 (452)
++.. .+ ..++++++|+|+||..+..+|...-+ .++++++.|+.
T Consensus 64 ~l~~----l~--~~~~~~lvGhSmGG~ia~~~a~~~p~--------~v~~lvl~~~~ 106 (255)
T PLN02965 64 LLSD----LP--PDHKVILVGHSIGGGSVTEALCKFTD--------KISMAIYVAAA 106 (255)
T ss_pred HHHh----cC--CCCCEEEEecCcchHHHHHHHHhCch--------heeEEEEEccc
Confidence 6653 22 12589999999999988888864322 26788887764
No 43
>PLN02578 hydrolase
Probab=96.85 E-value=0.0058 Score=62.58 Aligned_cols=112 Identities=17% Similarity=0.183 Sum_probs=69.8
Q ss_pred CceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCcccccc
Q 012985 103 GRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYS 182 (452)
Q Consensus 103 ~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~ 182 (452)
+..++|.-.. +.|-||.++|-++.+.. +.... | .| .+..+|+-+|.| |-|.|-.
T Consensus 75 ~~~i~Y~~~g------~g~~vvliHG~~~~~~~-w~~~~---~--------~l-------~~~~~v~~~D~~-G~G~S~~ 128 (354)
T PLN02578 75 GHKIHYVVQG------EGLPIVLIHGFGASAFH-WRYNI---P--------EL-------AKKYKVYALDLL-GFGWSDK 128 (354)
T ss_pred CEEEEEEEcC------CCCeEEEECCCCCCHHH-HHHHH---H--------HH-------hcCCEEEEECCC-CCCCCCC
Confidence 4566665321 23557899987554444 33222 1 11 235789999998 6665532
Q ss_pred CCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccc
Q 012985 183 NTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (452)
Q Consensus 183 ~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~ 259 (452)
. ...+ +.+..++++.+|++.. ...+++|+|+|+||..+..+|.+--+ .++++++.|+.
T Consensus 129 ~-~~~~---~~~~~a~~l~~~i~~~-------~~~~~~lvG~S~Gg~ia~~~A~~~p~--------~v~~lvLv~~~ 186 (354)
T PLN02578 129 A-LIEY---DAMVWRDQVADFVKEV-------VKEPAVLVGNSLGGFTALSTAVGYPE--------LVAGVALLNSA 186 (354)
T ss_pred c-cccc---CHHHHHHHHHHHHHHh-------ccCCeEEEEECHHHHHHHHHHHhChH--------hcceEEEECCC
Confidence 2 1122 3445567777777643 24689999999999988888775433 37888887764
No 44
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=96.75 E-value=0.029 Score=55.44 Aligned_cols=52 Identities=21% Similarity=0.171 Sum_probs=34.8
Q ss_pred HHHHHHHHH-CCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccccc
Q 012985 202 TFLVNWFER-FPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (452)
Q Consensus 202 ~fL~~f~~~-fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~ 262 (452)
+.|..+.+. ++ ....+++|+|+|+||..+-.+|..-- =.+++++..+|+.++
T Consensus 123 ~~l~~~~~~~~~-~~~~~~~~~G~S~GG~~a~~~a~~~p--------~~~~~~~~~~~~~~~ 175 (275)
T TIGR02821 123 QELPALVAAQFP-LDGERQGITGHSMGGHGALVIALKNP--------DRFKSVSAFAPIVAP 175 (275)
T ss_pred HHHHHHHHhhCC-CCCCceEEEEEChhHHHHHHHHHhCc--------ccceEEEEECCccCc
Confidence 344444443 44 44568999999999987766664321 126788888888775
No 45
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.70 E-value=0.011 Score=60.29 Aligned_cols=132 Identities=14% Similarity=0.267 Sum_probs=79.9
Q ss_pred eeEEEecCCCCceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEe
Q 012985 93 AGYLTVDPKAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLE 172 (452)
Q Consensus 93 sGyv~V~~~~~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiD 172 (452)
+=|+.+... .. -|.++-...+++++-++.++|= |.++. +|. +|=-+..+..||-.||
T Consensus 67 ~~~v~i~~~--~~--iw~~~~~~~~~~~~plVliHGy-GAg~g---~f~---------------~Nf~~La~~~~vyaiD 123 (365)
T KOG4409|consen 67 KKYVRIPNG--IE--IWTITVSNESANKTPLVLIHGY-GAGLG---LFF---------------RNFDDLAKIRNVYAID 123 (365)
T ss_pred eeeeecCCC--ce--eEEEeecccccCCCcEEEEecc-chhHH---HHH---------------HhhhhhhhcCceEEec
Confidence 445666522 22 2444433344677777889983 33322 222 1223445588999999
Q ss_pred cCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeee
Q 012985 173 TPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKG 252 (452)
Q Consensus 173 qPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkG 252 (452)
.| ||..|..+. +.. +.+.+-+.+.+-+++|.... +=.+.+|+|||+||......|.+--++ ++-
T Consensus 124 ll---G~G~SSRP~-F~~-d~~~~e~~fvesiE~WR~~~---~L~KmilvGHSfGGYLaa~YAlKyPer--------V~k 187 (365)
T KOG4409|consen 124 LL---GFGRSSRPK-FSI-DPTTAEKEFVESIEQWRKKM---GLEKMILVGHSFGGYLAAKYALKYPER--------VEK 187 (365)
T ss_pred cc---CCCCCCCCC-CCC-CcccchHHHHHHHHHHHHHc---CCcceeEeeccchHHHHHHHHHhChHh--------hce
Confidence 88 555544432 321 22233447778888898866 345899999999997766666544333 778
Q ss_pred eEEeccccccc
Q 012985 253 IAIGNAWIDDN 263 (452)
Q Consensus 253 I~IGNg~id~~ 263 (452)
+++.+||--++
T Consensus 188 LiLvsP~Gf~~ 198 (365)
T KOG4409|consen 188 LILVSPWGFPE 198 (365)
T ss_pred EEEeccccccc
Confidence 88888886655
No 46
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=96.67 E-value=0.014 Score=58.01 Aligned_cols=125 Identities=12% Similarity=0.066 Sum_probs=75.0
Q ss_pred CceEEEEEEecCCCCCCCCeEEEECCCCC---hhhhhhhhhhhcCCeeEcCCCCccccCCCCcc-ccceeEEEecCCCcc
Q 012985 103 GRALFYYFVESPQSSSSKPLVLWLNGGPG---CSSLGYGAMEELGPFRVNSDGKTLYRNEYAWN-NVANVLFLETPAGVG 178 (452)
Q Consensus 103 ~~~lFy~f~ea~~~~~~~Pl~lWlnGGPG---cSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~-~~anvlfiDqPvGvG 178 (452)
...+|.|+++.... ..+|+||.++|-.+ ++.-.+..+.+ .+. +-.+++-+|.| |.|
T Consensus 9 ~g~~~~~~~~p~~~-~~~~~VlllHG~g~~~~~~~~~~~~la~------------------~La~~Gy~Vl~~Dl~-G~G 68 (266)
T TIGR03101 9 HGFRFCLYHPPVAV-GPRGVVIYLPPFAEEMNKSRRMVALQAR------------------AFAAGGFGVLQIDLY-GCG 68 (266)
T ss_pred CCcEEEEEecCCCC-CCceEEEEECCCcccccchhHHHHHHHH------------------HHHHCCCEEEEECCC-CCC
Confidence 45688888876532 34799999998532 11110111110 111 34789999987 666
Q ss_pred ccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecc
Q 012985 179 FSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNA 258 (452)
Q Consensus 179 fSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg 258 (452)
.|-.... + .+....++|+..++ .|++... ..+++|+|+|.||..+..+|.+. .-.++++++-+|
T Consensus 69 ~S~g~~~-~---~~~~~~~~Dv~~ai-~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~--------p~~v~~lVL~~P 132 (266)
T TIGR03101 69 DSAGDFA-A---ARWDVWKEDVAAAY-RWLIEQG---HPPVTLWGLRLGALLALDAANPL--------AAKCNRLVLWQP 132 (266)
T ss_pred CCCCccc-c---CCHHHHHHHHHHHH-HHHHhcC---CCCEEEEEECHHHHHHHHHHHhC--------ccccceEEEecc
Confidence 6643221 1 13334456655543 3454432 46899999999999988777442 223788888888
Q ss_pred ccccc
Q 012985 259 WIDDN 263 (452)
Q Consensus 259 ~id~~ 263 (452)
.++-.
T Consensus 133 ~~~g~ 137 (266)
T TIGR03101 133 VVSGK 137 (266)
T ss_pred ccchH
Confidence 77654
No 47
>PRK06489 hypothetical protein; Provisional
Probab=96.67 E-value=0.0087 Score=61.39 Aligned_cols=141 Identities=15% Similarity=0.154 Sum_probs=72.3
Q ss_pred ceeEeeEEEecCCCCceEEEEEEecC---CCCCCCCeEEEECCCCChhhhhhh--hhhhcCCeeEcCCCCccccCCCCcc
Q 012985 89 FDQYAGYLTVDPKAGRALFYYFVESP---QSSSSKPLVLWLNGGPGCSSLGYG--AMEELGPFRVNSDGKTLYRNEYAWN 163 (452)
Q Consensus 89 ~~~ysGyv~V~~~~~~~lFy~f~ea~---~~~~~~Pl~lWlnGGPGcSS~~~g--~~~E~GP~~v~~~~~~l~~N~~sW~ 163 (452)
|...+|. +++ +..++|.-+... .+.++.|.||.++|++|.+.. +- .+.+ ..+.. ...--.
T Consensus 39 ~~~~~~~-~~~---g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~-~~~~~~~~---~l~~~-------~~~l~~ 103 (360)
T PRK06489 39 FTFHSGE-TLP---ELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKS-FLSPTFAG---ELFGP-------GQPLDA 103 (360)
T ss_pred eeccCCC-CcC---CceEEEEecCCCCcccccCCCCeEEEeCCCCCchhh-hccchhHH---HhcCC-------CCcccc
Confidence 4555664 332 456666633210 012336889999999886655 31 1110 00000 000113
Q ss_pred ccceeEEEecCCCccccccCCCC---CCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCE-EEEeccccccccHHHHHHHH
Q 012985 164 NVANVLFLETPAGVGFSYSNTSS---DYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDF-FITGESYAGHYVPQLAYTIL 239 (452)
Q Consensus 164 ~~anvlfiDqPvGvGfSy~~~~~---~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~-yi~GESYgG~yvP~lA~~I~ 239 (452)
+..+|+.+|.| |.|.|-..... .....+-++.|+++..++. +.. .-.++ +|+|+|+||..+-.+|.+--
T Consensus 104 ~~~~Via~Dl~-GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~---~~l---gi~~~~~lvG~SmGG~vAl~~A~~~P 176 (360)
T PRK06489 104 SKYFIILPDGI-GHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVT---EGL---GVKHLRLILGTSMGGMHAWMWGEKYP 176 (360)
T ss_pred cCCEEEEeCCC-CCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHH---Hhc---CCCceeEEEEECHHHHHHHHHHHhCc
Confidence 55799999988 77766321110 0000122344444444332 222 22456 48999999988877775532
Q ss_pred HcCCCCceeeeeeeEEeccc
Q 012985 240 SKNTSKTIINLKGIAIGNAW 259 (452)
Q Consensus 240 ~~n~~~~~inLkGI~IGNg~ 259 (452)
+ .++++++.++.
T Consensus 177 ~--------~V~~LVLi~s~ 188 (360)
T PRK06489 177 D--------FMDALMPMASQ 188 (360)
T ss_pred h--------hhheeeeeccC
Confidence 2 26777766553
No 48
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=96.65 E-value=0.013 Score=59.67 Aligned_cols=153 Identities=14% Similarity=0.112 Sum_probs=87.0
Q ss_pred CCceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhh---hc----CCeeEcCCCCccccC---CCCc-cccceeEE
Q 012985 102 AGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAME---EL----GPFRVNSDGKTLYRN---EYAW-NNVANVLF 170 (452)
Q Consensus 102 ~~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~---E~----GP~~v~~~~~~l~~N---~~sW-~~~anvlf 170 (452)
.|..|+++..+.. ..+.+|+.++|==+-+. +-.+. |. +|+.|+.+.. ..++ -..+ .+-.+|+-
T Consensus 6 ~g~~l~~~~~~~~---~~kg~v~i~HG~~eh~~--~~~~~~~~~~~~~~~~~~~~~~ry-~~y~~~~~~~l~~~G~~V~~ 79 (332)
T TIGR01607 6 DGLLLKTYSWIVK---NAIGIIVLIHGLKSHLR--LQFLKINAKIVNNDRAVLIDTDNY-YIYKDSWIENFNKNGYSVYG 79 (332)
T ss_pred CCCeEEEeeeecc---CCeEEEEEECCCchhhh--hhhhhcCcccCCCCeeEEEcCCcc-eEeeHHHHHHHHHCCCcEEE
Confidence 4667888877653 35689999998423332 11121 11 3444432210 0000 0122 24478999
Q ss_pred EecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHC----------------CCCC-CCCEEEEeccccccccHH
Q 012985 171 LETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERF----------------PQYK-NRDFFITGESYAGHYVPQ 233 (452)
Q Consensus 171 iDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~f----------------Pey~-~~~~yi~GESYgG~yvP~ 233 (452)
+|.| |.|.|-+.........+-+..++|+..+++..-+.- .++. +.|+||+|+|.||..+-.
T Consensus 80 ~D~r-GHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~ 158 (332)
T TIGR01607 80 LDLQ-GHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALR 158 (332)
T ss_pred eccc-ccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHH
Confidence 9985 888886542211111245667888888887654310 0233 679999999999998877
Q ss_pred HHHHHHHcCCCCceeeeeeeEEeccccc
Q 012985 234 LAYTILSKNTSKTIINLKGIAIGNAWID 261 (452)
Q Consensus 234 lA~~I~~~n~~~~~inLkGI~IGNg~id 261 (452)
++...-+.........++|+++-.|.+.
T Consensus 159 ~~~~~~~~~~~~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 159 LLELLGKSNENNDKLNIKGCISLSGMIS 186 (332)
T ss_pred HHHHhccccccccccccceEEEeccceE
Confidence 7665432210001246899987777764
No 49
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=96.65 E-value=0.0084 Score=61.02 Aligned_cols=75 Identities=15% Similarity=0.043 Sum_probs=50.7
Q ss_pred ccceeEEEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCC-CCEEEEeccccccccHHHHHHHHHcC
Q 012985 164 NVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKN-RDFFITGESYAGHYVPQLAYTILSKN 242 (452)
Q Consensus 164 ~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~-~~~yi~GESYgG~yvP~lA~~I~~~n 242 (452)
+...|+.+|.| |++.+. ...+ +....|+|+..||.. +.- +.+.|+|+|+||..+-.+|.+--++
T Consensus 98 ~~~~Vi~~Dl~---G~g~s~-~~~~---~~~~~a~dl~~ll~~-------l~l~~~~~lvG~SmGG~vA~~~A~~~P~~- 162 (343)
T PRK08775 98 ARFRLLAFDFI---GADGSL-DVPI---DTADQADAIALLLDA-------LGIARLHAFVGYSYGALVGLQFASRHPAR- 162 (343)
T ss_pred cccEEEEEeCC---CCCCCC-CCCC---CHHHHHHHHHHHHHH-------cCCCcceEEEEECHHHHHHHHHHHHChHh-
Confidence 56899999998 444332 2222 334567777777664 222 3467999999999888888754433
Q ss_pred CCCceeeeeeeEEecccc
Q 012985 243 TSKTIINLKGIAIGNAWI 260 (452)
Q Consensus 243 ~~~~~inLkGI~IGNg~i 260 (452)
++++++.++..
T Consensus 163 -------V~~LvLi~s~~ 173 (343)
T PRK08775 163 -------VRTLVVVSGAH 173 (343)
T ss_pred -------hheEEEECccc
Confidence 78888887753
No 50
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.57 E-value=0.011 Score=53.96 Aligned_cols=104 Identities=21% Similarity=0.259 Sum_probs=63.7
Q ss_pred CCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChhhHHH
Q 012985 120 KPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAED 199 (452)
Q Consensus 120 ~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d 199 (452)
.|.+++++|+|+++.. +....+. +..... + .+++.+|+| |.|.|. .. .+ .....+++
T Consensus 21 ~~~i~~~hg~~~~~~~-~~~~~~~-----------~~~~~~---~-~~~~~~d~~-g~g~s~-~~--~~---~~~~~~~~ 77 (282)
T COG0596 21 GPPLVLLHGFPGSSSV-WRPVFKV-----------LPALAA---R-YRVIAPDLR-GHGRSD-PA--GY---SLSAYADD 77 (282)
T ss_pred CCeEEEeCCCCCchhh-hHHHHHH-----------hhcccc---c-eEEEEeccc-CCCCCC-cc--cc---cHHHHHHH
Confidence 6799999999999888 4331110 111111 1 899999999 999986 11 11 11112444
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccccc
Q 012985 200 SYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWID 261 (452)
Q Consensus 200 ~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id 261 (452)
+..|+ +.+ ...++++.|+|+||..+-.++....+ .++++++.++...
T Consensus 78 ~~~~~----~~~---~~~~~~l~G~S~Gg~~~~~~~~~~p~--------~~~~~v~~~~~~~ 124 (282)
T COG0596 78 LAALL----DAL---GLEKVVLVGHSMGGAVALALALRHPD--------RVRGLVLIGPAPP 124 (282)
T ss_pred HHHHH----HHh---CCCceEEEEecccHHHHHHHHHhcch--------hhheeeEecCCCC
Confidence 44444 433 23349999999997766666654433 4677777666554
No 51
>PLN02442 S-formylglutathione hydrolase
Probab=96.48 E-value=0.035 Score=55.23 Aligned_cols=56 Identities=16% Similarity=0.110 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccccccc
Q 012985 197 AEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDN 263 (452)
Q Consensus 197 A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~~ 263 (452)
.+++...+..+++ .....+++|+|+|+||+-+-.+|.+- .=.+++++..+|..++.
T Consensus 126 ~~~l~~~i~~~~~---~~~~~~~~i~G~S~GG~~a~~~a~~~--------p~~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 126 VKELPKLLSDNFD---QLDTSRASIFGHSMGGHGALTIYLKN--------PDKYKSVSAFAPIANPI 181 (283)
T ss_pred HHHHHHHHHHHHH---hcCCCceEEEEEChhHHHHHHHHHhC--------chhEEEEEEECCccCcc
Confidence 3444444554443 34456799999999998666655431 11378888888887754
No 52
>PRK05855 short chain dehydrogenase; Validated
Probab=96.46 E-value=0.014 Score=62.93 Aligned_cols=100 Identities=16% Similarity=0.179 Sum_probs=64.9
Q ss_pred CceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCcccccc
Q 012985 103 GRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYS 182 (452)
Q Consensus 103 ~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~ 182 (452)
+..+.|+-+. +.+.|.||.++|.++.+.. |..+.+. | .+..+|+.+|.| |.|.|..
T Consensus 12 g~~l~~~~~g----~~~~~~ivllHG~~~~~~~-w~~~~~~-----------L-------~~~~~Vi~~D~~-G~G~S~~ 67 (582)
T PRK05855 12 GVRLAVYEWG----DPDRPTVVLVHGYPDNHEV-WDGVAPL-----------L-------ADRFRVVAYDVR-GAGRSSA 67 (582)
T ss_pred CEEEEEEEcC----CCCCCeEEEEcCCCchHHH-HHHHHHH-----------h-------hcceEEEEecCC-CCCCCCC
Confidence 5667776442 2347999999999777666 5544421 1 234789999987 7777754
Q ss_pred CCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHH
Q 012985 183 NTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQL 234 (452)
Q Consensus 183 ~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~l 234 (452)
..... ..+.+..++|+..+++.. - ..++++|+|+|+||..+-.+
T Consensus 68 ~~~~~--~~~~~~~a~dl~~~i~~l---~---~~~~~~lvGhS~Gg~~a~~~ 111 (582)
T PRK05855 68 PKRTA--AYTLARLADDFAAVIDAV---S---PDRPVHLLAHDWGSIQGWEA 111 (582)
T ss_pred CCccc--ccCHHHHHHHHHHHHHHh---C---CCCcEEEEecChHHHHHHHH
Confidence 32211 124567788888888752 1 13579999999999554333
No 53
>PRK10566 esterase; Provisional
Probab=96.39 E-value=0.016 Score=55.53 Aligned_cols=108 Identities=13% Similarity=0.116 Sum_probs=61.9
Q ss_pred EEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccc-cceeEEEecCCCccccccCCC
Q 012985 107 FYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNN-VANVLFLETPAGVGFSYSNTS 185 (452)
Q Consensus 107 Fy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~-~anvlfiDqPvGvGfSy~~~~ 185 (452)
+|-.+++....+..|+||.++|++|.... +..+.. .+.+ -.+++.+|.| |.|-|+....
T Consensus 14 ~~~~~p~~~~~~~~p~vv~~HG~~~~~~~-~~~~~~------------------~l~~~G~~v~~~d~~-g~G~~~~~~~ 73 (249)
T PRK10566 14 VLHAFPAGQRDTPLPTVFFYHGFTSSKLV-YSYFAV------------------ALAQAGFRVIMPDAP-MHGARFSGDE 73 (249)
T ss_pred eEEEcCCCCCCCCCCEEEEeCCCCcccch-HHHHHH------------------HHHhCCCEEEEecCC-cccccCCCcc
Confidence 34334443323457999999999887654 332221 1122 3689999977 5554543211
Q ss_pred CCCCCCCC-----hhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHH
Q 012985 186 SDYSNPGD-----NNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYT 237 (452)
Q Consensus 186 ~~~~~~~~-----~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~ 237 (452)
. .. ..+ ....+++..++ .|+...+.....+++|+|+|+||..+-.++.+
T Consensus 74 ~-~~-~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~ 127 (249)
T PRK10566 74 A-RR-LNHFWQILLQNMQEFPTLR-AAIREEGWLLDDRLAVGGASMGGMTALGIMAR 127 (249)
T ss_pred c-cc-hhhHHHHHHHHHHHHHHHH-HHHHhcCCcCccceeEEeecccHHHHHHHHHh
Confidence 1 00 010 12344554433 44555554556789999999999998877653
No 54
>PLN02511 hydrolase
Probab=96.28 E-value=0.018 Score=59.93 Aligned_cols=114 Identities=18% Similarity=0.214 Sum_probs=68.8
Q ss_pred EEEecCCCCceEEEEEEec--CCCCCCCCeEEEECCCCChhhhhhh-hhhhcCCeeEcCCCCccccCCCCccccceeEEE
Q 012985 95 YLTVDPKAGRALFYYFVES--PQSSSSKPLVLWLNGGPGCSSLGYG-AMEELGPFRVNSDGKTLYRNEYAWNNVANVLFL 171 (452)
Q Consensus 95 yv~V~~~~~~~lFy~f~ea--~~~~~~~Pl~lWlnGGPGcSS~~~g-~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfi 171 (452)
++... .|..+.+.++.. ...+.++|+||.|+|..|+|.-.|- .+.. ....+-.+++-+
T Consensus 75 ~l~~~--DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~-----------------~~~~~g~~vv~~ 135 (388)
T PLN02511 75 CLRTP--DGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLL-----------------RARSKGWRVVVF 135 (388)
T ss_pred EEECC--CCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHH-----------------HHHHCCCEEEEE
Confidence 45543 345555544432 2245678999999999888643121 1110 001245689999
Q ss_pred ecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHH
Q 012985 172 ETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLA 235 (452)
Q Consensus 172 DqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA 235 (452)
|.| |-|-|-..... + .....++|+..+++..-.++| +.+++++|+|.||..+-.++
T Consensus 136 d~r-G~G~s~~~~~~-~---~~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl 191 (388)
T PLN02511 136 NSR-GCADSPVTTPQ-F---YSASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYL 191 (388)
T ss_pred ecC-CCCCCCCCCcC-E---EcCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHH
Confidence 987 55544321111 1 113456788888877667776 56899999999998765544
No 55
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.26 E-value=0.011 Score=58.56 Aligned_cols=108 Identities=23% Similarity=0.395 Sum_probs=76.7
Q ss_pred CCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChhhH
Q 012985 118 SSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTA 197 (452)
Q Consensus 118 ~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A 197 (452)
..-|+++.++|| |.|.|.|..|.- .+..+ -..-+|-+| --|.|=+..++..|+ +-+..+
T Consensus 72 t~gpil~l~HG~-G~S~LSfA~~a~-----------el~s~-----~~~r~~a~D-lRgHGeTk~~~e~dl---S~eT~~ 130 (343)
T KOG2564|consen 72 TEGPILLLLHGG-GSSALSFAIFAS-----------ELKSK-----IRCRCLALD-LRGHGETKVENEDDL---SLETMS 130 (343)
T ss_pred CCccEEEEeecC-cccchhHHHHHH-----------HHHhh-----cceeEEEee-ccccCccccCChhhc---CHHHHH
Confidence 456999999998 999998877761 11111 112247789 489998888877775 456789
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEec
Q 012985 198 EDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGN 257 (452)
Q Consensus 198 ~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGN 257 (452)
+|+...+++||..-| .+++|+|||.||-...+.|.. ...-+|-|+.+.+
T Consensus 131 KD~~~~i~~~fge~~----~~iilVGHSmGGaIav~~a~~-------k~lpsl~Gl~viD 179 (343)
T KOG2564|consen 131 KDFGAVIKELFGELP----PQIILVGHSMGGAIAVHTAAS-------KTLPSLAGLVVID 179 (343)
T ss_pred HHHHHHHHHHhccCC----CceEEEeccccchhhhhhhhh-------hhchhhhceEEEE
Confidence 999999998885433 369999999999888665542 1233588887744
No 56
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.22 E-value=0.0069 Score=60.22 Aligned_cols=113 Identities=13% Similarity=0.135 Sum_probs=67.3
Q ss_pred CCCCCeEEEECCCCChh-hhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChh
Q 012985 117 SSSKPLVLWLNGGPGCS-SLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNN 195 (452)
Q Consensus 117 ~~~~Pl~lWlnGGPGcS-S~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~ 195 (452)
..++|++|+++|-.|.. ..-+-.+. +.+.-....||+.+|-+.+..-.|.. . . .+...
T Consensus 33 ~~~~p~vilIHG~~~~~~~~~~~~l~----------------~~ll~~~~~nVi~vD~~~~~~~~y~~--a-~--~~~~~ 91 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEESWISDLR----------------KAYLSRGDYNVIVVDWGRGANPNYPQ--A-V--NNTRV 91 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCcHHHHHH----------------HHHHhcCCCEEEEEECccccccChHH--H-H--HhHHH
Confidence 35679999999976654 22010010 11111145899999987431111110 0 0 13345
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccc
Q 012985 196 TAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (452)
Q Consensus 196 ~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~ 259 (452)
.++++..+|+...+.. .....+++|+|+|.|||.+-.+|...-+ .++.|+.-+|.
T Consensus 92 v~~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~--------~v~~iv~LDPa 146 (275)
T cd00707 92 VGAELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG--------KLGRITGLDPA 146 (275)
T ss_pred HHHHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC--------ccceeEEecCC
Confidence 6677777777666543 2345689999999999999888876422 37777775554
No 57
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=96.17 E-value=0.038 Score=67.70 Aligned_cols=107 Identities=16% Similarity=0.212 Sum_probs=67.1
Q ss_pred CCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCC-----CCCCCC
Q 012985 117 SSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTS-----SDYSNP 191 (452)
Q Consensus 117 ~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~-----~~~~~~ 191 (452)
.++.|.||+|+|.+|.+.. |-.+.+ .| .+..+++.+|.| |-|.|..... .... .
T Consensus 1368 ~~~~~~vVllHG~~~s~~~-w~~~~~-----------~L-------~~~~rVi~~Dl~-G~G~S~~~~~~~~~~~~~~-~ 1426 (1655)
T PLN02980 1368 NAEGSVVLFLHGFLGTGED-WIPIMK-----------AI-------SGSARCISIDLP-GHGGSKIQNHAKETQTEPT-L 1426 (1655)
T ss_pred CCCCCeEEEECCCCCCHHH-HHHHHH-----------HH-------hCCCEEEEEcCC-CCCCCCCcccccccccccc-C
Confidence 4567899999999888876 544332 12 234799999987 5555532211 0000 1
Q ss_pred CChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccc
Q 012985 192 GDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (452)
Q Consensus 192 ~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~ 259 (452)
+.+..|+++..++.. +...+++|+|+|+||..+-.+|.+--+ .++++++.++.
T Consensus 1427 si~~~a~~l~~ll~~-------l~~~~v~LvGhSmGG~iAl~~A~~~P~--------~V~~lVlis~~ 1479 (1655)
T PLN02980 1427 SVELVADLLYKLIEH-------ITPGKVTLVGYSMGARIALYMALRFSD--------KIEGAVIISGS 1479 (1655)
T ss_pred CHHHHHHHHHHHHHH-------hCCCCEEEEEECHHHHHHHHHHHhChH--------hhCEEEEECCC
Confidence 334455555555542 234689999999999988888764322 36777776653
No 58
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.04 E-value=0.056 Score=54.02 Aligned_cols=126 Identities=18% Similarity=0.275 Sum_probs=72.0
Q ss_pred CCceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccce-----eEEEec---
Q 012985 102 AGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVAN-----VLFLET--- 173 (452)
Q Consensus 102 ~~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~an-----vlfiDq--- 173 (452)
++.+.-||++.-..-++.+||||.|+|+=|...- + .+-..|++.|. |+|-|+
T Consensus 43 ~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag-~-------------------~~~sg~d~lAd~~gFlV~yPdg~~~ 102 (312)
T COG3509 43 NGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAG-Q-------------------LHGTGWDALADREGFLVAYPDGYDR 102 (312)
T ss_pred CCCccceEEEcCCCCCCCCCEEEEEecCCCChHH-h-------------------hcccchhhhhcccCcEEECcCcccc
Confidence 3566778988877778888999999998555443 2 12234555543 444431
Q ss_pred ---CCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeee
Q 012985 174 ---PAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINL 250 (452)
Q Consensus 174 ---PvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inL 250 (452)
|-+.|-+|..... . .+...+..+.+.+.....+| ......+||+|-|-||..+-.|+-.--+ -+
T Consensus 103 ~wn~~~~~~~~~p~~~--~--~g~ddVgflr~lva~l~~~~-gidp~RVyvtGlS~GG~Ma~~lac~~p~--------~f 169 (312)
T COG3509 103 AWNANGCGNWFGPADR--R--RGVDDVGFLRALVAKLVNEY-GIDPARVYVTGLSNGGRMANRLACEYPD--------IF 169 (312)
T ss_pred ccCCCcccccCCcccc--c--CCccHHHHHHHHHHHHHHhc-CcCcceEEEEeeCcHHHHHHHHHhcCcc--------cc
Confidence 3344444332211 0 12223444444444444445 3355689999999999877776643211 25
Q ss_pred eeeEEecccc
Q 012985 251 KGIAIGNAWI 260 (452)
Q Consensus 251 kGI~IGNg~i 260 (452)
.+|++..|..
T Consensus 170 aa~A~VAg~~ 179 (312)
T COG3509 170 AAIAPVAGLL 179 (312)
T ss_pred cceeeeeccc
Confidence 5666666555
No 59
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=96.03 E-value=0.05 Score=56.39 Aligned_cols=133 Identities=14% Similarity=0.073 Sum_probs=73.9
Q ss_pred CceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhh----------hhhc-CCeeEcCCCCccccCCCCccccceeEEE
Q 012985 103 GRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGA----------MEEL-GPFRVNSDGKTLYRNEYAWNNVANVLFL 171 (452)
Q Consensus 103 ~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~----------~~E~-GP~~v~~~~~~l~~N~~sW~~~anvlfi 171 (452)
+..++|.-+-. .+++.+|.||.++|-+|.+.. +.. +..+ ||-+ .+ -.+...||-+
T Consensus 32 ~~~~~y~~~G~-~~~~~~p~vvl~HG~~~~~~~-~~~~~~~~~~~~~w~~~~~~~~------~l------~~~~~~vi~~ 97 (379)
T PRK00175 32 PVELAYETYGT-LNADRSNAVLICHALTGDHHV-AGPHSPDDPKPGWWDNMVGPGK------PI------DTDRYFVICS 97 (379)
T ss_pred CceEEEEeccc-cCCCCCCEEEEeCCcCCchhh-cccccccCCCCcchhhccCCCC------cc------CccceEEEec
Confidence 45688875431 123457999999999887765 221 1111 1100 00 0245789999
Q ss_pred ecCCCccccccCCCC------CCCCCCChhhHHHHHHHHHHHHHHCCCCCCCC-EEEEeccccccccHHHHHHHHHcCCC
Q 012985 172 ETPAGVGFSYSNTSS------DYSNPGDNNTAEDSYTFLVNWFERFPQYKNRD-FFITGESYAGHYVPQLAYTILSKNTS 244 (452)
Q Consensus 172 DqPvGvGfSy~~~~~------~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~-~yi~GESYgG~yvP~lA~~I~~~n~~ 244 (452)
|.|-+.|.|.+..+. .+...-...+.+++.+.+..+++.. .-.+ ++|+|+|+||..+-.+|..--+
T Consensus 98 Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l---~~~~~~~lvG~S~Gg~ia~~~a~~~p~---- 170 (379)
T PRK00175 98 NVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDAL---GITRLAAVVGGSMGGMQALEWAIDYPD---- 170 (379)
T ss_pred cCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHh---CCCCceEEEEECHHHHHHHHHHHhChH----
Confidence 988444545332110 0000000123344444455555544 2345 5899999999888888876433
Q ss_pred CceeeeeeeEEecccc
Q 012985 245 KTIINLKGIAIGNAWI 260 (452)
Q Consensus 245 ~~~inLkGI~IGNg~i 260 (452)
.++++++.|+..
T Consensus 171 ----~v~~lvl~~~~~ 182 (379)
T PRK00175 171 ----RVRSALVIASSA 182 (379)
T ss_pred ----hhhEEEEECCCc
Confidence 388898887643
No 60
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=95.77 E-value=0.034 Score=58.99 Aligned_cols=80 Identities=15% Similarity=0.096 Sum_probs=52.3
Q ss_pred cceeEEEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCC
Q 012985 165 VANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTS 244 (452)
Q Consensus 165 ~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~ 244 (452)
..||+-+|-| |++.+...... .+...+|+++.+||+...+.. .+.-.+++|+|+|.|||.+-.+|...-
T Consensus 73 d~nVI~VDw~---g~g~s~y~~a~--~~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~p----- 141 (442)
T TIGR03230 73 SANVIVVDWL---SRAQQHYPTSA--AYTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLTK----- 141 (442)
T ss_pred CCEEEEEECC---CcCCCCCcccc--ccHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhCC-----
Confidence 4799999998 33332211111 134567888888887655444 355678999999999998888775421
Q ss_pred CceeeeeeeEEecc
Q 012985 245 KTIINLKGIAIGNA 258 (452)
Q Consensus 245 ~~~inLkGI~IGNg 258 (452)
-.+..|.+-+|
T Consensus 142 ---~rV~rItgLDP 152 (442)
T TIGR03230 142 ---HKVNRITGLDP 152 (442)
T ss_pred ---cceeEEEEEcC
Confidence 12666666555
No 61
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=95.72 E-value=0.096 Score=53.73 Aligned_cols=145 Identities=15% Similarity=0.220 Sum_probs=89.8
Q ss_pred EeeEEEecCCCCceEEEEEEecCCC-C-CCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCcc-cccee
Q 012985 92 YAGYLTVDPKAGRALFYYFVESPQS-S-SSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWN-NVANV 168 (452)
Q Consensus 92 ysGyv~V~~~~~~~lFy~f~ea~~~-~-~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~-~~anv 168 (452)
++.=|+++ ....++-+.|..... + ..+|++||++||=-|-+... ...+.+-.++. +.+|.
T Consensus 62 ~~~dv~~~--~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~---------------~~~y~~~~~~~a~~~~~ 124 (336)
T KOG1515|consen 62 TSKDVTID--PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSAN---------------SPAYDSFCTRLAAELNC 124 (336)
T ss_pred eeeeeEec--CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCC---------------CchhHHHHHHHHHHcCe
Confidence 34445554 356788988876543 3 68999999999966654310 00111112222 45565
Q ss_pred EEEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHH-HHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCce
Q 012985 169 LFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVN-WFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTI 247 (452)
Q Consensus 169 lfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~-f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~ 247 (452)
+-| .|+|--... ..++. .-++.-+.+.-|+.+ |++..-..+ .++|+|.|-||-.+-.+|.++.+.. ...
T Consensus 125 vvv----SVdYRLAPE-h~~Pa-~y~D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~--~~~ 194 (336)
T KOG1515|consen 125 VVV----SVDYRLAPE-HPFPA-AYDDGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEK--LSK 194 (336)
T ss_pred EEE----ecCcccCCC-CCCCc-cchHHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhcc--CCC
Confidence 543 346665533 23442 333333444444444 776654443 3999999999999999999998752 246
Q ss_pred eeeeeeEEeccccccc
Q 012985 248 INLKGIAIGNAWIDDN 263 (452)
Q Consensus 248 inLkGI~IGNg~id~~ 263 (452)
+.|||+++--|++.-.
T Consensus 195 ~ki~g~ili~P~~~~~ 210 (336)
T KOG1515|consen 195 PKIKGQILIYPFFQGT 210 (336)
T ss_pred cceEEEEEEecccCCC
Confidence 8899999977776543
No 62
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=95.57 E-value=0.03 Score=51.84 Aligned_cols=79 Identities=18% Similarity=0.185 Sum_probs=54.1
Q ss_pred ceeEEEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCC
Q 012985 166 ANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSK 245 (452)
Q Consensus 166 anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~ 245 (452)
++|+-+|+| |.|+|....... ...-..+++.+.+..++++.+ ..+++++|+||||..+-.+|..--+
T Consensus 1 f~vi~~d~r-G~g~S~~~~~~~----~~~~~~~~~~~~~~~~~~~l~---~~~~~~vG~S~Gg~~~~~~a~~~p~----- 67 (230)
T PF00561_consen 1 FDVILFDLR-GFGYSSPHWDPD----FPDYTTDDLAADLEALREALG---IKKINLVGHSMGGMLALEYAAQYPE----- 67 (230)
T ss_dssp EEEEEEECT-TSTTSSSCCGSG----SCTHCHHHHHHHHHHHHHHHT---TSSEEEEEETHHHHHHHHHHHHSGG-----
T ss_pred CEEEEEeCC-CCCCCCCCccCC----cccccHHHHHHHHHHHHHHhC---CCCeEEEEECCChHHHHHHHHHCch-----
Confidence 368889976 777775300011 233456777777777777775 3459999999999888777755322
Q ss_pred ceeeeeeeEEecccc
Q 012985 246 TIINLKGIAIGNAWI 260 (452)
Q Consensus 246 ~~inLkGI~IGNg~i 260 (452)
.+++|++.++..
T Consensus 68 ---~v~~lvl~~~~~ 79 (230)
T PF00561_consen 68 ---RVKKLVLISPPP 79 (230)
T ss_dssp ---GEEEEEEESESS
T ss_pred ---hhcCcEEEeeec
Confidence 589998877764
No 63
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=95.55 E-value=0.078 Score=52.32 Aligned_cols=79 Identities=20% Similarity=0.206 Sum_probs=53.9
Q ss_pred cceeEEEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCC
Q 012985 165 VANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTS 244 (452)
Q Consensus 165 ~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~ 244 (452)
-.+++-+|.| |.|-|-... .+-+...+|+..+++.+-+.+|.+ .+++++|+|.||..+-.+|..
T Consensus 57 G~~v~~~Dl~-G~G~S~~~~------~~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~~------- 120 (274)
T TIGR03100 57 GFPVLRFDYR-GMGDSEGEN------LGFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAPA------- 120 (274)
T ss_pred CCEEEEeCCC-CCCCCCCCC------CCHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhhh-------
Confidence 3789999987 777664321 133456677777777665666654 469999999999765544421
Q ss_pred CceeeeeeeEEeccccc
Q 012985 245 KTIINLKGIAIGNAWID 261 (452)
Q Consensus 245 ~~~inLkGI~IGNg~id 261 (452)
.-.++|+++.||++.
T Consensus 121 --~~~v~~lil~~p~~~ 135 (274)
T TIGR03100 121 --DLRVAGLVLLNPWVR 135 (274)
T ss_pred --CCCccEEEEECCccC
Confidence 124899999998754
No 64
>PRK07581 hypothetical protein; Validated
Probab=95.50 E-value=0.11 Score=52.60 Aligned_cols=129 Identities=12% Similarity=0.020 Sum_probs=69.6
Q ss_pred CceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCcccccc
Q 012985 103 GRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYS 182 (452)
Q Consensus 103 ~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~ 182 (452)
+..++|.-... ..+...|+||.++|++|.+.. +......||- +. .+...||-+|.| |.|.|-.
T Consensus 25 ~~~l~y~~~G~-~~~~~~~~vll~~~~~~~~~~-~~~~~~~~~~--------l~------~~~~~vi~~D~~-G~G~S~~ 87 (339)
T PRK07581 25 DARLAYKTYGT-LNAAKDNAILYPTWYSGTHQD-NEWLIGPGRA--------LD------PEKYFIIIPNMF-GNGLSSS 87 (339)
T ss_pred CceEEEEecCc-cCCCCCCEEEEeCCCCCCccc-chhhccCCCc--------cC------cCceEEEEecCC-CCCCCCC
Confidence 45677664432 123456888877665554434 2111111111 11 245789999998 7776643
Q ss_pred CCCC--CCCC--CCChhhHHHHHHHHHHHHHHCCCCCCCC-EEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEec
Q 012985 183 NTSS--DYSN--PGDNNTAEDSYTFLVNWFERFPQYKNRD-FFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGN 257 (452)
Q Consensus 183 ~~~~--~~~~--~~~~~~A~d~~~fL~~f~~~fPey~~~~-~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGN 257 (452)
.... .+.. ......|+++........+.. .-.+ .+|+|+|+||..+-.+|.+--+. ++++++.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l---gi~~~~~lvG~S~GG~va~~~a~~~P~~--------V~~Lvli~ 156 (339)
T PRK07581 88 PSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKF---GIERLALVVGWSMGAQQTYHWAVRYPDM--------VERAAPIA 156 (339)
T ss_pred CCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHh---CCCceEEEEEeCHHHHHHHHHHHHCHHH--------Hhhheeee
Confidence 2211 1110 001124555554333333322 3356 57999999999999998765444 67777766
Q ss_pred cc
Q 012985 258 AW 259 (452)
Q Consensus 258 g~ 259 (452)
+.
T Consensus 157 ~~ 158 (339)
T PRK07581 157 GT 158 (339)
T ss_pred cC
Confidence 54
No 65
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=95.44 E-value=0.12 Score=51.91 Aligned_cols=114 Identities=23% Similarity=0.225 Sum_probs=76.1
Q ss_pred CCceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccc
Q 012985 102 AGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSY 181 (452)
Q Consensus 102 ~~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy 181 (452)
.|..||.-......+++.+-+|+.++|.=+-||..|--+.. .|.. .-.-|-.+|++ |-|.|-
T Consensus 36 rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~-----------~l~~------~g~~v~a~D~~-GhG~Sd 97 (313)
T KOG1455|consen 36 RGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAK-----------RLAK------SGFAVYAIDYE-GHGRSD 97 (313)
T ss_pred CCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHH-----------HHHh------CCCeEEEeecc-CCCcCC
Confidence 46789876655544557888999999965555432321111 1111 12347789985 777775
Q ss_pred cCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHH
Q 012985 182 SNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYT 237 (452)
Q Consensus 182 ~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~ 237 (452)
+ ...|. .+-+..+.|...|+..+-. .+++++.+.|++|||.||-.+-.++.+
T Consensus 98 G--l~~yi-~~~d~~v~D~~~~~~~i~~-~~e~~~lp~FL~GeSMGGAV~Ll~~~k 149 (313)
T KOG1455|consen 98 G--LHAYV-PSFDLVVDDVISFFDSIKE-REENKGLPRFLFGESMGGAVALLIALK 149 (313)
T ss_pred C--CcccC-CcHHHHHHHHHHHHHHHhh-ccccCCCCeeeeecCcchHHHHHHHhh
Confidence 3 34454 3667788898888877554 558899999999999999776666654
No 66
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=95.29 E-value=0.063 Score=58.53 Aligned_cols=130 Identities=19% Similarity=0.157 Sum_probs=79.0
Q ss_pred CCceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCc-cccceeEEEecCCCcccc
Q 012985 102 AGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAW-NNVANVLFLETPAGVGFS 180 (452)
Q Consensus 102 ~~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW-~~~anvlfiDqPvGvGfS 180 (452)
.|..|+..++... +.+..|+||.++|-...+... . +.. . ....-| .+-..|+-+|. -|.|.|
T Consensus 5 DG~~L~~~~~~P~-~~~~~P~Il~~~gyg~~~~~~-~-----~~~--------~-~~~~~l~~~Gy~vv~~D~-RG~g~S 67 (550)
T TIGR00976 5 DGTRLAIDVYRPA-GGGPVPVILSRTPYGKDAGLR-W-----GLD--------K-TEPAWFVAQGYAVVIQDT-RGRGAS 67 (550)
T ss_pred CCCEEEEEEEecC-CCCCCCEEEEecCCCCchhhc-c-----ccc--------c-ccHHHHHhCCcEEEEEec-cccccC
Confidence 4677887766543 234679999999743322110 0 000 0 000112 23578999996 588888
Q ss_pred ccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccc
Q 012985 181 YSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWI 260 (452)
Q Consensus 181 y~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~i 260 (452)
-+.... + + ...++|+..+++ |+.+.|.- +.++.++|+||||...-.+|.. + .-.||+|+..++..
T Consensus 68 ~g~~~~-~---~-~~~~~D~~~~i~-~l~~q~~~-~~~v~~~G~S~GG~~a~~~a~~---~-----~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 68 EGEFDL-L---G-SDEAADGYDLVD-WIAKQPWC-DGNVGMLGVSYLAVTQLLAAVL---Q-----PPALRAIAPQEGVW 132 (550)
T ss_pred CCceEe-c---C-cccchHHHHHHH-HHHhCCCC-CCcEEEEEeChHHHHHHHHhcc---C-----CCceeEEeecCccc
Confidence 654221 1 2 456778777666 67666643 4689999999999765555432 1 23589999988887
Q ss_pred ccc
Q 012985 261 DDN 263 (452)
Q Consensus 261 d~~ 263 (452)
|..
T Consensus 133 d~~ 135 (550)
T TIGR00976 133 DLY 135 (550)
T ss_pred chh
Confidence 754
No 67
>PRK10985 putative hydrolase; Provisional
Probab=95.24 E-value=0.14 Score=51.64 Aligned_cols=109 Identities=19% Similarity=0.195 Sum_probs=57.1
Q ss_pred CceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhh-hhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccc
Q 012985 103 GRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGA-MEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSY 181 (452)
Q Consensus 103 ~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~-~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy 181 (452)
|..+.+++.+....+.++|+||.++|.+|++...+.. +.+ .+.. +-.+++-+|.+ |.|=|-
T Consensus 41 g~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~-----------~l~~------~G~~v~~~d~r-G~g~~~ 102 (324)
T PRK10985 41 GDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLE-----------AAQK------RGWLGVVMHFR-GCSGEP 102 (324)
T ss_pred CCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHH-----------HHHH------CCCEEEEEeCC-CCCCCc
Confidence 3444444444333456789999999999875432211 111 1111 12467777875 443221
Q ss_pred cCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHH
Q 012985 182 SNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAY 236 (452)
Q Consensus 182 ~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~ 236 (452)
......+. .+ ..+|+..+++..-+++| ..+++++|+|.||..+-..+.
T Consensus 103 ~~~~~~~~-~~---~~~D~~~~i~~l~~~~~---~~~~~~vG~S~GG~i~~~~~~ 150 (324)
T PRK10985 103 NRLHRIYH-SG---ETEDARFFLRWLQREFG---HVPTAAVGYSLGGNMLACLLA 150 (324)
T ss_pred cCCcceEC-CC---chHHHHHHHHHHHHhCC---CCCEEEEEecchHHHHHHHHH
Confidence 11111111 12 23555554443334454 468999999999987554443
No 68
>PLN00021 chlorophyllase
Probab=95.11 E-value=0.058 Score=54.75 Aligned_cols=116 Identities=13% Similarity=0.127 Sum_probs=68.7
Q ss_pred CCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChhh
Q 012985 117 SSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNT 196 (452)
Q Consensus 117 ~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~ 196 (452)
....|+|++++|+.+.... |..+.+ .|. +| -..|+.+|-+ |++.... ..+-+.
T Consensus 49 ~g~~PvVv~lHG~~~~~~~-y~~l~~-----------~La----s~--G~~VvapD~~---g~~~~~~------~~~i~d 101 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSF-YSQLLQ-----------HIA----SH--GFIVVAPQLY---TLAGPDG------TDEIKD 101 (313)
T ss_pred CCCCCEEEEECCCCCCccc-HHHHHH-----------HHH----hC--CCEEEEecCC---CcCCCCc------hhhHHH
Confidence 4578999999998766554 433332 011 11 2567777766 3432111 122334
Q ss_pred HHHHHHHHHHHHHH-CC---CCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccccc
Q 012985 197 AEDSYTFLVNWFER-FP---QYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (452)
Q Consensus 197 A~d~~~fL~~f~~~-fP---ey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~ 262 (452)
+.++..++.+-++. .| +....+++|+|+|.||+.+-.+|....+.. ....+++++.-+++...
T Consensus 102 ~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~---~~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 102 AAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVS---LPLKFSALIGLDPVDGT 168 (313)
T ss_pred HHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccc---cccceeeEEeecccccc
Confidence 56666666654433 22 234467999999999998888886543321 23468888887776543
No 69
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=95.09 E-value=0.24 Score=49.91 Aligned_cols=138 Identities=18% Similarity=0.195 Sum_probs=88.6
Q ss_pred eeEeeEEEecCCCCceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeE
Q 012985 90 DQYAGYLTVDPKAGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVL 169 (452)
Q Consensus 90 ~~ysGyv~V~~~~~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvl 169 (452)
..-.|+.... .+..++|+.+++.+++. .+|++++|.=.++.- |-.+.+ .+. .+=..|+
T Consensus 8 ~~~~~~~~~~--d~~~~~~~~~~~~~~~~--g~Vvl~HG~~Eh~~r-y~~la~-----------~l~------~~G~~V~ 65 (298)
T COG2267 8 TRTEGYFTGA--DGTRLRYRTWAAPEPPK--GVVVLVHGLGEHSGR-YEELAD-----------DLA------ARGFDVY 65 (298)
T ss_pred ccccceeecC--CCceEEEEeecCCCCCC--cEEEEecCchHHHHH-HHHHHH-----------HHH------hCCCEEE
Confidence 3444555543 46789999998865544 899999998566554 533331 111 1336789
Q ss_pred EEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceee
Q 012985 170 FLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIIN 249 (452)
Q Consensus 170 fiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~in 249 (452)
=+|.| |-|-|.- ...... .+-.+...|+..|++..-+. ....++||+|+|-||-.+...+..- .-+
T Consensus 66 ~~D~R-GhG~S~r-~~rg~~-~~f~~~~~dl~~~~~~~~~~---~~~~p~~l~gHSmGg~Ia~~~~~~~--------~~~ 131 (298)
T COG2267 66 ALDLR-GHGRSPR-GQRGHV-DSFADYVDDLDAFVETIAEP---DPGLPVFLLGHSMGGLIALLYLARY--------PPR 131 (298)
T ss_pred EecCC-CCCCCCC-CCcCCc-hhHHHHHHHHHHHHHHHhcc---CCCCCeEEEEeCcHHHHHHHHHHhC--------Ccc
Confidence 99997 7777751 122111 12234455555555554443 3478999999999998777666543 246
Q ss_pred eeeeEEeccccccc
Q 012985 250 LKGIAIGNAWIDDN 263 (452)
Q Consensus 250 LkGI~IGNg~id~~ 263 (452)
++|+++-+|++...
T Consensus 132 i~~~vLssP~~~l~ 145 (298)
T COG2267 132 IDGLVLSSPALGLG 145 (298)
T ss_pred ccEEEEECccccCC
Confidence 99999999988765
No 70
>PRK10162 acetyl esterase; Provisional
Probab=94.90 E-value=0.11 Score=52.63 Aligned_cols=63 Identities=10% Similarity=0.020 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccccc
Q 012985 197 AEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (452)
Q Consensus 197 A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~ 262 (452)
+.+.++++.+.-+.+. ....+++|+|+|.||+.+-.++....+.. .....++|+++..|++|.
T Consensus 135 ~~~a~~~l~~~~~~~~-~d~~~i~l~G~SaGG~la~~~a~~~~~~~--~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 135 IVAVCCYFHQHAEDYG-INMSRIGFAGDSAGAMLALASALWLRDKQ--IDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred HHHHHHHHHHhHHHhC-CChhHEEEEEECHHHHHHHHHHHHHHhcC--CCccChhheEEECCccCC
Confidence 4444445544433331 23468999999999999999987765542 113457889988888874
No 71
>PRK10115 protease 2; Provisional
Probab=94.61 E-value=0.07 Score=59.88 Aligned_cols=142 Identities=13% Similarity=0.068 Sum_probs=80.6
Q ss_pred EEEecCCCCceEEEEEEecCC--CCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEe
Q 012985 95 YLTVDPKAGRALFYYFVESPQ--SSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLE 172 (452)
Q Consensus 95 yv~V~~~~~~~lFy~f~ea~~--~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiD 172 (452)
.|.+....|..+-.|++-.+. .....|++|+.+||||.+... +...+. ..|...-=++.+=
T Consensus 418 ~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p-~f~~~~----------------~~l~~rG~~v~~~ 480 (686)
T PRK10115 418 HLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDA-DFSFSR----------------LSLLDRGFVYAIV 480 (686)
T ss_pred EEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCC-CccHHH----------------HHHHHCCcEEEEE
Confidence 344444557777776665332 234569999999999998652 222211 1233333333333
Q ss_pred cCCCccccccCC--CCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeee
Q 012985 173 TPAGVGFSYSNT--SSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINL 250 (452)
Q Consensus 173 qPvGvGfSy~~~--~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inL 250 (452)
.+-|.| .|+.. ..+.. ..-...-+|+....+... .-.--....+.|.|-||||.-+-.++ .+. +=-+
T Consensus 481 n~RGs~-g~G~~w~~~g~~-~~k~~~~~D~~a~~~~Lv-~~g~~d~~rl~i~G~S~GG~l~~~~~----~~~----Pdlf 549 (686)
T PRK10115 481 HVRGGG-ELGQQWYEDGKF-LKKKNTFNDYLDACDALL-KLGYGSPSLCYGMGGSAGGMLMGVAI----NQR----PELF 549 (686)
T ss_pred EcCCCC-ccCHHHHHhhhh-hcCCCcHHHHHHHHHHHH-HcCCCChHHeEEEEECHHHHHHHHHH----hcC----hhhe
Confidence 356544 44421 01000 011135677777665433 33333456899999999997444333 221 1249
Q ss_pred eeeEEecccccccc
Q 012985 251 KGIAIGNAWIDDNL 264 (452)
Q Consensus 251 kGI~IGNg~id~~~ 264 (452)
++++.+.|++|...
T Consensus 550 ~A~v~~vp~~D~~~ 563 (686)
T PRK10115 550 HGVIAQVPFVDVVT 563 (686)
T ss_pred eEEEecCCchhHhh
Confidence 99999999999754
No 72
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=94.51 E-value=0.17 Score=51.73 Aligned_cols=96 Identities=21% Similarity=0.239 Sum_probs=62.2
Q ss_pred CCCCeEEEECC-CCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChhh
Q 012985 118 SSKPLVLWLNG-GPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNT 196 (452)
Q Consensus 118 ~~~Pl~lWlnG-GPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~ 196 (452)
.++|-||.++| |-++.+- .++= .+.++..---|+=||-| |++|+..... +..-+
T Consensus 56 ~~~~pvlllHGF~~~~~~w-----~~~~-------------~~L~~~~~~~v~aiDl~---G~g~~s~~~~----~~~y~ 110 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSW-----RRVV-------------PLLSKAKGLRVLAIDLP---GHGYSSPLPR----GPLYT 110 (326)
T ss_pred CCCCcEEEeccccCCcccH-----hhhc-------------cccccccceEEEEEecC---CCCcCCCCCC----CCcee
Confidence 57888999998 4333322 2111 12223333458889998 6776433221 33356
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHc
Q 012985 197 AEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSK 241 (452)
Q Consensus 197 A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~ 241 (452)
+.+...-+..|+. ++...+++|.|+||||..+=.+|....+.
T Consensus 111 ~~~~v~~i~~~~~---~~~~~~~~lvghS~Gg~va~~~Aa~~P~~ 152 (326)
T KOG1454|consen 111 LRELVELIRRFVK---EVFVEPVSLVGHSLGGIVALKAAAYYPET 152 (326)
T ss_pred hhHHHHHHHHHHH---hhcCcceEEEEeCcHHHHHHHHHHhCccc
Confidence 7777777777776 44567899999999999998888875544
No 73
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=94.45 E-value=0.13 Score=58.23 Aligned_cols=137 Identities=22% Similarity=0.167 Sum_probs=79.9
Q ss_pred CceEEEEEEecCC--CCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCcccc-ceeEEEecCCCccc
Q 012985 103 GRALFYYFVESPQ--SSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNV-ANVLFLETPAGVGF 179 (452)
Q Consensus 103 ~~~lFy~f~ea~~--~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~-anvlfiDqPvGvGf 179 (452)
|-..++++.-.+. +.+.-||+++..||||+-+. .+.| .+..|.+.+.+. +=|+-|| +.|+|+
T Consensus 507 ~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v-~~~~-------------~~~~~~~~~s~~g~~v~~vd-~RGs~~ 571 (755)
T KOG2100|consen 507 GITANAILILPPNFDPSKKYPLLVVVYGGPGSQSV-TSKF-------------SVDWNEVVVSSRGFAVLQVD-GRGSGG 571 (755)
T ss_pred cEEEEEEEecCCCCCCCCCCCEEEEecCCCCccee-eeeE-------------EecHHHHhhccCCeEEEEEc-CCCcCC
Confidence 4456666665543 23456999999999993333 1111 122344433333 4578899 789986
Q ss_pred cccCC-CCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecc
Q 012985 180 SYSNT-SSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNA 258 (452)
Q Consensus 180 Sy~~~-~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg 258 (452)
.--.- ...+...|+. ..+|.....+.+.+.+ -.-..++.|+|-||||- ++..++.+. +.--+|--+.-+|
T Consensus 572 ~G~~~~~~~~~~lG~~-ev~D~~~~~~~~~~~~-~iD~~ri~i~GwSyGGy----~t~~~l~~~---~~~~fkcgvavaP 642 (755)
T KOG2100|consen 572 YGWDFRSALPRNLGDV-EVKDQIEAVKKVLKLP-FIDRSRVAIWGWSYGGY----LTLKLLESD---PGDVFKCGVAVAP 642 (755)
T ss_pred cchhHHHHhhhhcCCc-chHHHHHHHHHHHhcc-cccHHHeEEeccChHHH----HHHHHhhhC---cCceEEEEEEecc
Confidence 53221 1111112433 3577777777777666 33344699999999995 444555442 1233566567788
Q ss_pred ccccc
Q 012985 259 WIDDN 263 (452)
Q Consensus 259 ~id~~ 263 (452)
++|..
T Consensus 643 Vtd~~ 647 (755)
T KOG2100|consen 643 VTDWL 647 (755)
T ss_pred eeeee
Confidence 88765
No 74
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=94.44 E-value=0.029 Score=52.71 Aligned_cols=92 Identities=14% Similarity=0.083 Sum_probs=60.3
Q ss_pred ccceeEEEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCC
Q 012985 164 NVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNT 243 (452)
Q Consensus 164 ~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~ 243 (452)
+=..|+.+|..-+.||+..-....... .-....+|+...++..-++. ......+.|+|.||||+.+-.++.+ +
T Consensus 13 ~Gy~v~~~~~rGs~g~g~~~~~~~~~~-~~~~~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG~~a~~~~~~---~-- 85 (213)
T PF00326_consen 13 QGYAVLVPNYRGSGGYGKDFHEAGRGD-WGQADVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGGYLALLAATQ---H-- 85 (213)
T ss_dssp TT-EEEEEE-TTSSSSHHHHHHTTTTG-TTHHHHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHHHHHHHHHHH---T--
T ss_pred CCEEEEEEcCCCCCccchhHHHhhhcc-ccccchhhHHHHHHHHhccc-cccceeEEEEcccccccccchhhcc---c--
Confidence 446899999988888776422221111 22346777877776554444 5566789999999999988877762 2
Q ss_pred CCceeeeeeeEEeccccccccc
Q 012985 244 SKTIINLKGIAIGNAWIDDNLC 265 (452)
Q Consensus 244 ~~~~inLkGI~IGNg~id~~~~ 265 (452)
.-.++.++.++|.+|....
T Consensus 86 ---~~~f~a~v~~~g~~d~~~~ 104 (213)
T PF00326_consen 86 ---PDRFKAAVAGAGVSDLFSY 104 (213)
T ss_dssp ---CCGSSEEEEESE-SSTTCS
T ss_pred ---ceeeeeeeccceecchhcc
Confidence 2237899999999887543
No 75
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=93.88 E-value=0.05 Score=56.99 Aligned_cols=83 Identities=18% Similarity=0.157 Sum_probs=55.6
Q ss_pred ccceeEEEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCC
Q 012985 164 NVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNT 243 (452)
Q Consensus 164 ~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~ 243 (452)
+=.+||=+|-| |||+|.... +. +..+.++..+..|+...|+.-...+.++|-|.||.|++.+|..=..
T Consensus 217 rGiA~LtvDmP-G~G~s~~~~---l~-----~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~--- 284 (411)
T PF06500_consen 217 RGIAMLTVDMP-GQGESPKWP---LT-----QDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDP--- 284 (411)
T ss_dssp CT-EEEEE--T-TSGGGTTT----S------S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTT---
T ss_pred CCCEEEEEccC-CCcccccCC---CC-----cCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhccc---
Confidence 44689999998 999984321 11 1234566777788889999999999999999999999999964212
Q ss_pred CCceeeeeeeEEeccccccc
Q 012985 244 SKTIINLKGIAIGNAWIDDN 263 (452)
Q Consensus 244 ~~~~inLkGI~IGNg~id~~ 263 (452)
.|||++.-.|.++..
T Consensus 285 -----RlkavV~~Ga~vh~~ 299 (411)
T PF06500_consen 285 -----RLKAVVALGAPVHHF 299 (411)
T ss_dssp -----T-SEEEEES---SCG
T ss_pred -----ceeeEeeeCchHhhh
Confidence 389987766666543
No 76
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=93.54 E-value=0.28 Score=46.16 Aligned_cols=101 Identities=16% Similarity=0.204 Sum_probs=66.7
Q ss_pred eEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccc-cceeEEEecCCCccccccCCCCCCCCCCChhhHHHH
Q 012985 122 LVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNN-VANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDS 200 (452)
Q Consensus 122 l~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~-~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~ 200 (452)
.|+++.+|=|.++. |-.+.. .+ .+ ..+|..|+.| |+.-... .. .+-++.|+..
T Consensus 2 ~lf~~p~~gG~~~~-y~~la~-----------~l-------~~~~~~v~~i~~~---~~~~~~~---~~-~si~~la~~y 55 (229)
T PF00975_consen 2 PLFCFPPAGGSASS-YRPLAR-----------AL-------PDDVIGVYGIEYP---GRGDDEP---PP-DSIEELASRY 55 (229)
T ss_dssp EEEEESSTTCSGGG-GHHHHH-----------HH-------TTTEEEEEEECST---TSCTTSH---EE-SSHHHHHHHH
T ss_pred eEEEEcCCccCHHH-HHHHHH-----------hC-------CCCeEEEEEEecC---CCCCCCC---CC-CCHHHHHHHH
Confidence 57888988675555 544441 11 12 4789999988 5541111 11 2556667766
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccc
Q 012985 201 YTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (452)
Q Consensus 201 ~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~ 259 (452)
.+.++ ...|+ .|++|+|.|+||..+=.+|.++.++. ...+.+++.++.
T Consensus 56 ~~~I~---~~~~~---gp~~L~G~S~Gg~lA~E~A~~Le~~G-----~~v~~l~liD~~ 103 (229)
T PF00975_consen 56 AEAIR---ARQPE---GPYVLAGWSFGGILAFEMARQLEEAG-----EEVSRLILIDSP 103 (229)
T ss_dssp HHHHH---HHTSS---SSEEEEEETHHHHHHHHHHHHHHHTT------SESEEEEESCS
T ss_pred HHHhh---hhCCC---CCeeehccCccHHHHHHHHHHHHHhh-----hccCceEEecCC
Confidence 65554 45653 39999999999999999999988873 457788887754
No 77
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=92.84 E-value=0.3 Score=42.08 Aligned_cols=94 Identities=21% Similarity=0.328 Sum_probs=57.9
Q ss_pred eEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChhhHHHHH
Q 012985 122 LVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSY 201 (452)
Q Consensus 122 l~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~ 201 (452)
+||+++|+.|.... +..+.+ .+.. +-.+++.+|.| |.|-+ .....+++++
T Consensus 1 ~vv~~HG~~~~~~~-~~~~~~-----------~l~~------~G~~v~~~~~~-~~~~~-----------~~~~~~~~~~ 50 (145)
T PF12695_consen 1 VVVLLHGWGGSRRD-YQPLAE-----------ALAE------QGYAVVAFDYP-GHGDS-----------DGADAVERVL 50 (145)
T ss_dssp EEEEECTTTTTTHH-HHHHHH-----------HHHH------TTEEEEEESCT-TSTTS-----------HHSHHHHHHH
T ss_pred CEEEECCCCCCHHH-HHHHHH-----------HHHH------CCCEEEEEecC-CCCcc-----------chhHHHHHHH
Confidence 58999999776555 555543 1111 23678888876 33322 0112333433
Q ss_pred HHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccc
Q 012985 202 TFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (452)
Q Consensus 202 ~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~ 259 (452)
+.+. ..++ ..++++++|+|.||..+..++..- -.+++++.-+|+
T Consensus 51 ~~~~---~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~---------~~v~~~v~~~~~ 94 (145)
T PF12695_consen 51 ADIR---AGYP--DPDRIILIGHSMGGAIAANLAARN---------PRVKAVVLLSPY 94 (145)
T ss_dssp HHHH---HHHC--TCCEEEEEEETHHHHHHHHHHHHS---------TTESEEEEESES
T ss_pred HHHH---hhcC--CCCcEEEEEEccCcHHHHHHhhhc---------cceeEEEEecCc
Confidence 3332 3333 567999999999999888877632 237888887775
No 78
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=92.78 E-value=0.76 Score=45.47 Aligned_cols=241 Identities=18% Similarity=0.198 Sum_probs=128.0
Q ss_pred CCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCC----CCCCCCChh
Q 012985 120 KPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSS----DYSNPGDNN 195 (452)
Q Consensus 120 ~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~----~~~~~~~~~ 195 (452)
+++++|+-|=||.-.. |--|.+ .|..+- +....|+=+... ||+...... +....+-++
T Consensus 2 ~~li~~IPGNPGlv~f-Y~~Fl~-----------~L~~~l---~~~~~i~~ish~---Gh~~~~~~~~~~~~~~~~sL~~ 63 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEF-YEEFLS-----------ALYEKL---NPQFEILGISHA---GHSTSPSNSKFSPNGRLFSLQD 63 (266)
T ss_pred cEEEEEECCCCChHHH-HHHHHH-----------HHHHhC---CCCCeeEEecCC---CCcCCcccccccCCCCccCHHH
Confidence 5899999999999998 877763 233321 566777777765 777665441 111136677
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccccccccccchhhhhhc
Q 012985 196 TAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNLCTKGMFDFFWT 275 (452)
Q Consensus 196 ~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~~~~~~~~~~y~~~ 275 (452)
+.+.-.+||+++....+ ..+.+++|.|||=|+..+ .+|+++.. ....++++++.-=|.+....+... ...+..
T Consensus 64 QI~hk~~~i~~~~~~~~-~~~~~liLiGHSIGayi~----levl~r~~-~~~~~V~~~~lLfPTi~~ia~Sp~-G~~l~~ 136 (266)
T PF10230_consen 64 QIEHKIDFIKELIPQKN-KPNVKLILIGHSIGAYIA----LEVLKRLP-DLKFRVKKVILLFPTIEDIAKSPN-GRRLTP 136 (266)
T ss_pred HHHHHHHHHHHHhhhhc-CCCCcEEEEeCcHHHHHH----HHHHHhcc-ccCCceeEEEEeCCccccccCCch-hHHHHH
Confidence 88888999998887654 246799999999887554 44444431 123556666554444433322111 000000
Q ss_pred cCCCCHHHHHHHHHh-hhhcCCCCchhHHHHHHHHHHH-hCCCcccccccccCCCCCCCCCCCCCccccCCCchhHHhhh
Q 012985 276 HALNSDETNAAINKY-CDFATGQLSTSCDQYQTQGVRE-YGQIDLYNVYAPLCKSSAPPPPTAGVIREYDPCSDKYVNSY 353 (452)
Q Consensus 276 ~glIs~~~~~~i~~~-C~~~~~~~~~~C~~a~~~~~~~-~g~in~YnI~~~~C~~~~~~~~~~~~~~~~dpc~~~~~~~Y 353 (452)
. +........+... +-.. ..-+.+ +...+... .+. .++.........
T Consensus 137 ~-~~~~~~~~~~~~~~~~l~--~~lP~~--~~~~lv~~~~~~--------------------------~~~~~~~t~~~l 185 (266)
T PF10230_consen 137 L-LFSPPPLVWLASFLSFLL--SLLPES--VLRWLVRWVMGF--------------------------PPPAVEATTKFL 185 (266)
T ss_pred H-HhhccHHHHHHHHHHHHH--HHCCHH--HHHHHHHHHcCC--------------------------ChHHHHHHHHHh
Confidence 0 0000000000000 0000 000000 01111110 010 011222345556
Q ss_pred cCcHHHHhhccCCccCcccCCCCcccCCCCChHHHHHHHHHcCCeEEEEecCCCcccCchhHHHHHHhCC
Q 012985 354 LNLAEVQAALHAKHTNWSTCSDLTWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALN 423 (452)
Q Consensus 354 LN~~dVq~ALhv~~~~w~~Cs~~v~~d~~~s~lp~i~~LL~~girVlIYsGD~D~i~p~~Gt~~wi~~L~ 423 (452)
.|..-|++||+...+....-. .+. ....++..-+++.|+++|.|..|-=||..--+..++...
T Consensus 186 ~~~~~v~qaL~Ma~~Em~~I~----~~d---~~~~~~~~~~~~~kl~f~fg~~D~Wvp~~~~~~l~~~~~ 248 (266)
T PF10230_consen 186 LSPRVVRQALYMARDEMREIR----EDD---NDELIKHHNENGDKLWFYFGQNDHWVPNETRDELIERYP 248 (266)
T ss_pred cCHHHHHHHHHHHHHHHHHcc----Ccc---hHHHHHHhccCCCEEEEEEeCCCCCCCHHHHHHHHHHcC
Confidence 777888999986643111110 011 234445554558999999999999999888777777754
No 79
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=92.55 E-value=0.52 Score=45.50 Aligned_cols=50 Identities=18% Similarity=0.203 Sum_probs=33.3
Q ss_pred HHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccc
Q 012985 202 TFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (452)
Q Consensus 202 ~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~ 259 (452)
..|.+.+......-.+++|++|.|-||...-.|+..--+ -+.++++-.|.
T Consensus 82 ~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd--------~faa~a~~sG~ 131 (220)
T PF10503_consen 82 AALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPD--------LFAAVAVVSGV 131 (220)
T ss_pred HHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCc--------cceEEEeeccc
Confidence 333444444335567789999999999887777754333 26777776665
No 80
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=91.46 E-value=0.55 Score=45.27 Aligned_cols=122 Identities=24% Similarity=0.351 Sum_probs=77.9
Q ss_pred ceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccC
Q 012985 104 RALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSN 183 (452)
Q Consensus 104 ~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~ 183 (452)
-.|.-|.+.++ .++|++|.++|--|- | |.+.-+ .+ .... +=..||+-+|- .|-|-|-+.
T Consensus 65 vtL~a~~~~~E---~S~pTlLyfh~NAGN--m--Ghr~~i------~~--~fy~-----~l~mnv~ivsY-RGYG~S~Gs 123 (300)
T KOG4391|consen 65 VTLDAYLMLSE---SSRPTLLYFHANAGN--M--GHRLPI------AR--VFYV-----NLKMNVLIVSY-RGYGKSEGS 123 (300)
T ss_pred eeEeeeeeccc---CCCceEEEEccCCCc--c--cchhhH------HH--HHHH-----HcCceEEEEEe-eccccCCCC
Confidence 34555555543 388999999986554 2 333311 00 0111 23468999996 577766654
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccccc
Q 012985 184 TSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (452)
Q Consensus 184 ~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~ 262 (452)
.+.. +-.-.|+...+.| -..|...+++++++|.|-||.-+-.+|.+-.+ .+.++++.|-+++-
T Consensus 124 psE~----GL~lDs~avldyl----~t~~~~dktkivlfGrSlGGAvai~lask~~~--------ri~~~ivENTF~SI 186 (300)
T KOG4391|consen 124 PSEE----GLKLDSEAVLDYL----MTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD--------RISAIIVENTFLSI 186 (300)
T ss_pred cccc----ceeccHHHHHHHH----hcCccCCcceEEEEecccCCeeEEEeeccchh--------heeeeeeechhccc
Confidence 3321 3333344333333 46788889999999999999998888876544 38899999988875
No 81
>PRK11460 putative hydrolase; Provisional
Probab=90.81 E-value=1.1 Score=43.17 Aligned_cols=36 Identities=8% Similarity=-0.031 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHH
Q 012985 200 SYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAY 236 (452)
Q Consensus 200 ~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~ 236 (452)
+.++++.+.++. ....++++|+|.|.||..+-.++.
T Consensus 87 l~~~i~~~~~~~-~~~~~~i~l~GfS~Gg~~al~~a~ 122 (232)
T PRK11460 87 FIETVRYWQQQS-GVGASATALIGFSQGAIMALEAVK 122 (232)
T ss_pred HHHHHHHHHHhc-CCChhhEEEEEECHHHHHHHHHHH
Confidence 334444333333 344568999999999998876664
No 82
>PRK11071 esterase YqiA; Provisional
Probab=90.51 E-value=1.1 Score=41.86 Aligned_cols=78 Identities=15% Similarity=0.231 Sum_probs=47.7
Q ss_pred CeEEEECCCCChhhhhhh--hhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChhhHH
Q 012985 121 PLVLWLNGGPGCSSLGYG--AMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAE 198 (452)
Q Consensus 121 Pl~lWlnGGPGcSS~~~g--~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~ 198 (452)
|.||+|+|-+|++.. +- .+.+. +..+- ...+++..|-| |+. +
T Consensus 2 p~illlHGf~ss~~~-~~~~~~~~~-----------l~~~~----~~~~v~~~dl~---g~~-----------------~ 45 (190)
T PRK11071 2 STLLYLHGFNSSPRS-AKATLLKNW-----------LAQHH----PDIEMIVPQLP---PYP-----------------A 45 (190)
T ss_pred CeEEEECCCCCCcch-HHHHHHHHH-----------HHHhC----CCCeEEeCCCC---CCH-----------------H
Confidence 789999998777665 22 11110 00000 12457888887 431 1
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHH
Q 012985 199 DSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYT 237 (452)
Q Consensus 199 d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~ 237 (452)
+..+++..+.+.. ..++++|+|.|.||.++-.+|..
T Consensus 46 ~~~~~l~~l~~~~---~~~~~~lvG~S~Gg~~a~~~a~~ 81 (190)
T PRK11071 46 DAAELLESLVLEH---GGDPLGLVGSSLGGYYATWLSQC 81 (190)
T ss_pred HHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHH
Confidence 2334455555544 34689999999999999888864
No 83
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=90.38 E-value=1.4 Score=47.09 Aligned_cols=39 Identities=21% Similarity=0.180 Sum_probs=26.5
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHH
Q 012985 196 TAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLA 235 (452)
Q Consensus 196 ~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA 235 (452)
.....++++++--+.|. -..+++.|+|+|.||+-+-.++
T Consensus 156 D~~~al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~~ 194 (493)
T cd00312 156 DQRLALKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLLL 194 (493)
T ss_pred HHHHHHHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhHh
Confidence 34555666666666664 3456899999999998654443
No 84
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=89.82 E-value=0.51 Score=43.88 Aligned_cols=63 Identities=21% Similarity=0.297 Sum_probs=46.9
Q ss_pred hhHHHHHHHHHHHHHH---CCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccccc
Q 012985 195 NTAEDSYTFLVNWFER---FPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (452)
Q Consensus 195 ~~A~d~~~fL~~f~~~---fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~ 262 (452)
...+|+.++++-..+. + ++...+++|+|+|-||+.+-.++..+.+.. ...++++++..|++|.
T Consensus 47 ~~~~D~~~a~~~l~~~~~~~-~~d~~~i~l~G~SAGg~la~~~~~~~~~~~----~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 47 AALEDVKAAYRWLLKNADKL-GIDPERIVLIGDSAGGHLALSLALRARDRG----LPKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHHHHTHHHH-TEEEEEEEEEEETHHHHHHHHHHHHHHHTT----TCHESEEEEESCHSST
T ss_pred ccccccccceeeeccccccc-cccccceEEeecccccchhhhhhhhhhhhc----ccchhhhhcccccccc
Confidence 4555666555544433 2 245678999999999999999998887764 2339999999998876
No 85
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=89.82 E-value=3.2 Score=41.50 Aligned_cols=46 Identities=15% Similarity=0.169 Sum_probs=38.4
Q ss_pred CCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccccccc
Q 012985 215 KNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNL 264 (452)
Q Consensus 215 ~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~~~ 264 (452)
..+++.|+|+|-||+-+-.++...-+.. ...+++.++..|++|...
T Consensus 150 dp~~i~v~GdSAGG~La~~~a~~~~~~~----~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 150 DPSRIAVAGDSAGGHLALALALAARDRG----LPLPAAQVLISPLLDLTS 195 (312)
T ss_pred CccceEEEecCcccHHHHHHHHHHHhcC----CCCceEEEEEecccCCcc
Confidence 3578999999999999999999887753 345788888899998865
No 86
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=89.02 E-value=4.4 Score=41.24 Aligned_cols=133 Identities=15% Similarity=0.123 Sum_probs=70.0
Q ss_pred CceEEEEEEecCCCCCCCCeEEEECCCCChhhhh-h------hhhhhc-CCeeEcCCCCccccCCCCccccceeEEEecC
Q 012985 103 GRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLG-Y------GAMEEL-GPFRVNSDGKTLYRNEYAWNNVANVLFLETP 174 (452)
Q Consensus 103 ~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~-~------g~~~E~-GP~~v~~~~~~l~~N~~sW~~~anvlfiDqP 174 (452)
+..++|.-+... +...+|.||.++|=.|.+-.. | |.+..+ || ...--.+...|+-+|.|
T Consensus 15 ~~~~~y~~~g~~-~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~------------~~~l~~~~~~vi~~D~~ 81 (351)
T TIGR01392 15 DVRVAYETYGTL-NAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGP------------GRAIDTDRYFVVCSNVL 81 (351)
T ss_pred CceEEEEecccc-CCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCC------------CCCcCCCceEEEEecCC
Confidence 467888755331 123468999999976654331 0 011100 11 00111255799999987
Q ss_pred CC--ccccccCC--CCC--CCCCCChhhHHHHHHHHHHHHHHCCCCCCCC-EEEEeccccccccHHHHHHHHHcCCCCce
Q 012985 175 AG--VGFSYSNT--SSD--YSNPGDNNTAEDSYTFLVNWFERFPQYKNRD-FFITGESYAGHYVPQLAYTILSKNTSKTI 247 (452)
Q Consensus 175 vG--vGfSy~~~--~~~--~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~-~yi~GESYgG~yvP~lA~~I~~~n~~~~~ 247 (452)
| -|-|-..+ ... +.......+.+++.+.+..+++.. .-.+ ++|+|+|+||..+-.+|..--+
T Consensus 82 -G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~l~G~S~Gg~ia~~~a~~~p~------- 150 (351)
T TIGR01392 82 -GGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHL---GIEQIAAVVGGSMGGMQALEWAIDYPE------- 150 (351)
T ss_pred -CCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHc---CCCCceEEEEECHHHHHHHHHHHHChH-------
Confidence 4 33221100 000 100001123444444555555543 2345 9999999999888888765322
Q ss_pred eeeeeeEEecccc
Q 012985 248 INLKGIAIGNAWI 260 (452)
Q Consensus 248 inLkGI~IGNg~i 260 (452)
.++++++.++..
T Consensus 151 -~v~~lvl~~~~~ 162 (351)
T TIGR01392 151 -RVRAIVVLATSA 162 (351)
T ss_pred -hhheEEEEccCC
Confidence 378888877643
No 87
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=88.50 E-value=0.65 Score=45.08 Aligned_cols=72 Identities=13% Similarity=0.149 Sum_probs=48.2
Q ss_pred CChhhHHHHHHHHHHHHHHCCCC-CCCCEEEEeccccccccHHHHHHHHHcCC-CCceeeeeeeEEeccccccc
Q 012985 192 GDNNTAEDSYTFLVNWFERFPQY-KNRDFFITGESYAGHYVPQLAYTILSKNT-SKTIINLKGIAIGNAWIDDN 263 (452)
Q Consensus 192 ~~~~~A~d~~~fL~~f~~~fPey-~~~~~yi~GESYgG~yvP~lA~~I~~~n~-~~~~inLkGI~IGNg~id~~ 263 (452)
.|.+.|...-..|..|++..-+. ..++++|.+||.|+.-+-..-..+..... ....-.|..|++-+|.+|..
T Consensus 67 ~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d 140 (233)
T PF05990_consen 67 YDRESARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDND 140 (233)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHH
Confidence 34444544444455555443333 46799999999999988888877777651 12234788999999988863
No 88
>PLN02454 triacylglycerol lipase
Probab=87.55 E-value=1.3 Score=46.59 Aligned_cols=68 Identities=18% Similarity=0.283 Sum_probs=52.9
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccccc
Q 012985 194 NNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (452)
Q Consensus 194 ~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~ 262 (452)
..+.+++...++...+++|.++ ..++|+|||-||-.+-..|..|..+......++++.|..|.|-+..
T Consensus 206 ~S~r~qvl~~V~~l~~~Yp~~~-~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 206 LSARSQLLAKIKELLERYKDEK-LSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQVGN 273 (414)
T ss_pred HHHHHHHHHHHHHHHHhCCCCC-ceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCcccC
Confidence 3577889999999999998764 3699999999999998888888775311234567778888888765
No 89
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=87.27 E-value=3.7 Score=43.15 Aligned_cols=131 Identities=21% Similarity=0.351 Sum_probs=80.2
Q ss_pred EEEecCCCCceEEEEEEecCC----CCCCCCeEEEECCCCChhhhhh-----hhhhhcCCeeEcCCCCccccCCCCcccc
Q 012985 95 YLTVDPKAGRALFYYFVESPQ----SSSSKPLVLWLNGGPGCSSLGY-----GAMEELGPFRVNSDGKTLYRNEYAWNNV 165 (452)
Q Consensus 95 yv~V~~~~~~~lFy~f~ea~~----~~~~~Pl~lWlnGGPGcSS~~~-----g~~~E~GP~~v~~~~~~l~~N~~sW~~~ 165 (452)
+|...+ .|.-.+=|+..... +..++|+++.|.|=.|.|.-.| ...++.| +++
T Consensus 97 ii~~~D-GG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r~----------------- 157 (409)
T KOG1838|consen 97 IIKTSD-GGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YRV----------------- 157 (409)
T ss_pred EEEeCC-CCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cEE-----------------
Confidence 444432 23444446544332 3578899999999888876321 3344445 331
Q ss_pred ceeEEEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCC
Q 012985 166 ANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSK 245 (452)
Q Consensus 166 anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~ 245 (452)
+-+- +.|.|-|--+++.-|.. ++. +|+-++++.--++|| .+++|.+|.|+||..+ .+++-+.. .
T Consensus 158 ---VVfN-~RG~~g~~LtTpr~f~a-g~t---~Dl~~~v~~i~~~~P---~a~l~avG~S~Gg~iL---~nYLGE~g--~ 221 (409)
T KOG1838|consen 158 ---VVFN-HRGLGGSKLTTPRLFTA-GWT---EDLREVVNHIKKRYP---QAPLFAVGFSMGGNIL---TNYLGEEG--D 221 (409)
T ss_pred ---EEEC-CCCCCCCccCCCceeec-CCH---HHHHHHHHHHHHhCC---CCceEEEEecchHHHH---HHHhhhcc--C
Confidence 1122 57888887776665542 544 555555555557899 5799999999999753 45554442 1
Q ss_pred ceeeeeeeEEecccc
Q 012985 246 TIINLKGIAIGNAWI 260 (452)
Q Consensus 246 ~~inLkGI~IGNg~i 260 (452)
..-=..|++|-|||-
T Consensus 222 ~~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 222 NTPLIAAVAVCNPWD 236 (409)
T ss_pred CCCceeEEEEeccch
Confidence 123367888888883
No 90
>PLN02872 triacylglycerol lipase
Probab=86.38 E-value=2.6 Score=44.28 Aligned_cols=96 Identities=18% Similarity=0.183 Sum_probs=56.0
Q ss_pred CCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCc-cccceeEEEecCCCccccccCCC-----CCCCCC
Q 012985 118 SSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAW-NNVANVLFLETPAGVGFSYSNTS-----SDYSNP 191 (452)
Q Consensus 118 ~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW-~~~anvlfiDqPvGvGfSy~~~~-----~~~~~~ 191 (452)
..+|.||.++|..++|.. |..- +|-+ .+ .+-. .+-..|.-.|. -|.|+|+.... ..+...
T Consensus 72 ~~~~~Vll~HGl~~ss~~-w~~~---~~~~------sl---a~~La~~GydV~l~n~-RG~~~s~gh~~~~~~~~~fw~~ 137 (395)
T PLN02872 72 QRGPPVLLQHGLFMAGDA-WFLN---SPEQ------SL---GFILADHGFDVWVGNV-RGTRWSYGHVTLSEKDKEFWDW 137 (395)
T ss_pred CCCCeEEEeCcccccccc-eeec---Cccc------ch---HHHHHhCCCCcccccc-cccccccCCCCCCccchhccCC
Confidence 457899999998777766 4211 1200 00 0001 12246666775 57787765321 111112
Q ss_pred CChhhH-HHHHHHHHHHHHHCCCCCCCCEEEEecccccccc
Q 012985 192 GDNNTA-EDSYTFLVNWFERFPQYKNRDFFITGESYAGHYV 231 (452)
Q Consensus 192 ~~~~~A-~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yv 231 (452)
+-++.| .|+-+++....+.. .++++++|+|.||..+
T Consensus 138 s~~e~a~~Dl~a~id~i~~~~----~~~v~~VGhS~Gg~~~ 174 (395)
T PLN02872 138 SWQELALYDLAEMIHYVYSIT----NSKIFIVGHSQGTIMS 174 (395)
T ss_pred cHHHHHHHHHHHHHHHHHhcc----CCceEEEEECHHHHHH
Confidence 344556 68888887766532 3689999999999654
No 91
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=86.31 E-value=1.8 Score=49.42 Aligned_cols=89 Identities=21% Similarity=0.253 Sum_probs=57.7
Q ss_pred CCCccccceeEEEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCC--------------CCCCCCEEEEec
Q 012985 159 EYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFP--------------QYKNRDFFITGE 224 (452)
Q Consensus 159 ~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fP--------------ey~~~~~yi~GE 224 (452)
.|=..+=.+|+++|. .|+|-|-+.... ...+..+|....+. |+...+ .+.+-++-++|.
T Consensus 273 ~~~~~rGYaVV~~D~-RGtg~SeG~~~~-----~~~~E~~D~~~vIe-Wl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~ 345 (767)
T PRK05371 273 DYFLPRGFAVVYVSG-IGTRGSDGCPTT-----GDYQEIESMKAVID-WLNGRATAYTDRTRGKEVKADWSNGKVAMTGK 345 (767)
T ss_pred HHHHhCCeEEEEEcC-CCCCCCCCcCcc-----CCHHHHHHHHHHHH-HHhhCCccccccccccccccCCCCCeeEEEEE
Confidence 333345579999995 799988775322 22344555555444 666321 122458999999
Q ss_pred cccccccHHHHHHHHHcCCCCceeeeeeeEEecccccc
Q 012985 225 SYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (452)
Q Consensus 225 SYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~ 262 (452)
||+|...-.+|..- .-.||.|+-..|+.|.
T Consensus 346 SY~G~~~~~aAa~~--------pp~LkAIVp~a~is~~ 375 (767)
T PRK05371 346 SYLGTLPNAVATTG--------VEGLETIIPEAAISSW 375 (767)
T ss_pred cHHHHHHHHHHhhC--------CCcceEEEeeCCCCcH
Confidence 99998777666432 2349999988777663
No 92
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=86.26 E-value=1.3 Score=43.60 Aligned_cols=83 Identities=24% Similarity=0.252 Sum_probs=57.7
Q ss_pred ceeEEEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCC
Q 012985 166 ANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSK 245 (452)
Q Consensus 166 anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~ 245 (452)
..+|.+| .-|+|-|.+..... ..+.++|.++.+ +|+...|--. -++-++|.||+|.....+|..-
T Consensus 58 Y~vV~~D-~RG~g~S~G~~~~~-----~~~e~~D~~d~I-~W~~~Qpws~-G~VGm~G~SY~G~~q~~~A~~~------- 122 (272)
T PF02129_consen 58 YAVVVQD-VRGTGGSEGEFDPM-----SPNEAQDGYDTI-EWIAAQPWSN-GKVGMYGISYGGFTQWAAAARR------- 122 (272)
T ss_dssp -EEEEEE--TTSTTS-S-B-TT-----SHHHHHHHHHHH-HHHHHCTTEE-EEEEEEEETHHHHHHHHHHTTT-------
T ss_pred CEEEEEC-CcccccCCCccccC-----ChhHHHHHHHHH-HHHHhCCCCC-CeEEeeccCHHHHHHHHHHhcC-------
Confidence 5789999 58999998764331 455677777654 5777776544 4799999999999888887622
Q ss_pred ceeeeeeeEEecccccccc
Q 012985 246 TIINLKGIAIGNAWIDDNL 264 (452)
Q Consensus 246 ~~inLkGI~IGNg~id~~~ 264 (452)
.-.||.|+..-+..|...
T Consensus 123 -~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 123 -PPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp --TTEEEEEEESE-SBTCC
T ss_pred -CCCceEEEecccCCcccc
Confidence 334999999988888654
No 93
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=85.97 E-value=1.6 Score=37.87 Aligned_cols=62 Identities=21% Similarity=0.317 Sum_probs=44.5
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccccc
Q 012985 196 TAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWID 261 (452)
Q Consensus 196 ~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id 261 (452)
..+.+.+.|+++.++.| +.++.|+|||-||-.+..+|..+.++. .....+++-+..|.|-+.
T Consensus 46 ~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~-~~~~~~~~~~~fg~P~~~ 107 (140)
T PF01764_consen 46 LYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHG-PSSSSNVKCYTFGAPRVG 107 (140)
T ss_dssp HHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCT-TTSTTTEEEEEES-S--B
T ss_pred HHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcc-cccccceeeeecCCcccc
Confidence 44566777777777777 578999999999999999999998875 112456777777766653
No 94
>COG4099 Predicted peptidase [General function prediction only]
Probab=85.02 E-value=14 Score=37.49 Aligned_cols=114 Identities=22% Similarity=0.287 Sum_probs=60.2
Q ss_pred CCCceEEEEEEecC-CCC--CCCCeEEEECCC-CChhhh------hhhhhhhcCCeeEcCCCCccccCCCCccccceeEE
Q 012985 101 KAGRALFYYFVESP-QSS--SSKPLVLWLNGG-PGCSSL------GYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLF 170 (452)
Q Consensus 101 ~~~~~lFy~f~ea~-~~~--~~~Pl~lWlnGG-PGcSS~------~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlf 170 (452)
..+..|-|-||..+ -+| +.-||||||+|+ -|.+-. +.|+..+.||- .=.|
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pe--------------------dqcf 228 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPE--------------------DQCF 228 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeeccc--------------------CceE
Confidence 56788999888764 233 344999999995 333221 12444444441 1145
Q ss_pred EecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHH
Q 012985 171 LETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILS 240 (452)
Q Consensus 171 iDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~ 240 (452)
|=.|- |..--.|.....+ .--....+.+..=+...+..-.+.+|++|-|-||.-.=.++.+.-+
T Consensus 229 VlAPQ-----y~~if~d~e~~t~-~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPd 292 (387)
T COG4099 229 VLAPQ-----YNPIFADSEEKTL-LYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPD 292 (387)
T ss_pred EEccc-----ccccccccccccc-hhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCch
Confidence 54552 3221111110011 1112222333333344556667789999999999877666655443
No 95
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=83.05 E-value=4.2 Score=40.11 Aligned_cols=102 Identities=24% Similarity=0.482 Sum_probs=52.9
Q ss_pred CCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCC----CccccceeEEEecCCCccccccCCCCCCCCCC
Q 012985 117 SSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEY----AWNNVANVLFLETPAGVGFSYSNTSSDYSNPG 192 (452)
Q Consensus 117 ~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~----sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~ 192 (452)
-+++|+++|+-|-||-++. |--|.- .|..|-- -|+ ..++=-.+-|+-+==+-+.+..+. -+
T Consensus 26 ~~~~~li~~IpGNPG~~gF-Y~~F~~-----------~L~~~l~~r~~~wt-Ish~~H~~~P~sl~~~~s~~~~ei--fs 90 (301)
T KOG3975|consen 26 GEDKPLIVWIPGNPGLLGF-YTEFAR-----------HLHLNLIDRLPVWT-ISHAGHALMPASLREDHSHTNEEI--FS 90 (301)
T ss_pred CCCceEEEEecCCCCchhH-HHHHHH-----------HHHHhcccccceeE-EeccccccCCcccccccccccccc--cc
Confidence 3789999999999999887 644431 1111110 121 011111122311111111111111 14
Q ss_pred ChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcC
Q 012985 193 DNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKN 242 (452)
Q Consensus 193 ~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n 242 (452)
-+++.+.=.+|++++. | +++++||.|+|=|.- +..+|+..+
T Consensus 91 L~~QV~HKlaFik~~~---P--k~~ki~iiGHSiGaY----m~Lqil~~~ 131 (301)
T KOG3975|consen 91 LQDQVDHKLAFIKEYV---P--KDRKIYIIGHSIGAY----MVLQILPSI 131 (301)
T ss_pred hhhHHHHHHHHHHHhC---C--CCCEEEEEecchhHH----HHHHHhhhc
Confidence 4455666677777544 4 688999999998653 444555543
No 96
>PRK13604 luxD acyl transferase; Provisional
Probab=82.80 E-value=13 Score=37.85 Aligned_cols=124 Identities=13% Similarity=0.176 Sum_probs=70.8
Q ss_pred CCceEEEEEEecC-CCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCcccc
Q 012985 102 AGRALFYYFVESP-QSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFS 180 (452)
Q Consensus 102 ~~~~lFy~f~ea~-~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfS 180 (452)
.|..|.=|+.+.. .++...|++|..+| .|+....+..+. .+-+.+=.++|-.|.=-|+|=|
T Consensus 18 dG~~L~Gwl~~P~~~~~~~~~~vIi~HG-f~~~~~~~~~~A-----------------~~La~~G~~vLrfD~rg~~GeS 79 (307)
T PRK13604 18 NGQSIRVWETLPKENSPKKNNTILIASG-FARRMDHFAGLA-----------------EYLSSNGFHVIRYDSLHHVGLS 79 (307)
T ss_pred CCCEEEEEEEcCcccCCCCCCEEEEeCC-CCCChHHHHHHH-----------------HHHHHCCCEEEEecCCCCCCCC
Confidence 4677887887775 34566788888776 555432122222 2333456789999975556877
Q ss_pred ccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccc
Q 012985 181 YSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWI 260 (452)
Q Consensus 181 y~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~i 260 (452)
-++. .+... +. -..|+...+ .|+++. ...++.|.|+|.||..+...|. ..+++++++..|..
T Consensus 80 ~G~~-~~~t~-s~--g~~Dl~aai-d~lk~~---~~~~I~LiG~SmGgava~~~A~----------~~~v~~lI~~sp~~ 141 (307)
T PRK13604 80 SGTI-DEFTM-SI--GKNSLLTVV-DWLNTR---GINNLGLIAASLSARIAYEVIN----------EIDLSFLITAVGVV 141 (307)
T ss_pred CCcc-ccCcc-cc--cHHHHHHHH-HHHHhc---CCCceEEEEECHHHHHHHHHhc----------CCCCCEEEEcCCcc
Confidence 4322 12211 11 234443222 233332 1357999999999987533332 22478888877776
Q ss_pred c
Q 012985 261 D 261 (452)
Q Consensus 261 d 261 (452)
+
T Consensus 142 ~ 142 (307)
T PRK13604 142 N 142 (307)
T ss_pred c
Confidence 5
No 97
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=82.69 E-value=33 Score=36.92 Aligned_cols=86 Identities=17% Similarity=0.180 Sum_probs=58.9
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccccccccccchh--h-h
Q 012985 196 TAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNLCTKGMF--D-F 272 (452)
Q Consensus 196 ~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~~~~~~~~~--~-y 272 (452)
++.---..++.||.+-|+| -|..|-|=||+=.-..|++--+. +.||+.|.|-++......... . .
T Consensus 98 ~~~~aK~l~~~~Yg~~p~~----sY~~GcS~GGRqgl~~AQryP~d--------fDGIlAgaPA~~~~~~~~~~~~~~~~ 165 (474)
T PF07519_consen 98 TTVVAKALIEAFYGKAPKY----SYFSGCSTGGRQGLMAAQRYPED--------FDGILAGAPAINWTHLQLAHAWPAQV 165 (474)
T ss_pred HHHHHHHHHHHHhCCCCCc----eEEEEeCCCcchHHHHHHhChhh--------cCeEEeCCchHHHHHHHHHhhhhhhh
Confidence 3333446677888887755 79999999999999999887665 899999999998754332211 1 1
Q ss_pred hhc--cCCCCHHHHHHH----HHhhhh
Q 012985 273 FWT--HALNSDETNAAI----NKYCDF 293 (452)
Q Consensus 273 ~~~--~glIs~~~~~~i----~~~C~~ 293 (452)
... .+.++...++.| .++|+.
T Consensus 166 ~~~~~~~~~~~~~~~~i~~avl~~CD~ 192 (474)
T PF07519_consen 166 MYPDPGGYLSPCKLDLIHAAVLAACDA 192 (474)
T ss_pred hccCCCCCCCHHHHHHHHHHHHHhccc
Confidence 111 356777766554 457764
No 98
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=81.27 E-value=2.6 Score=37.50 Aligned_cols=43 Identities=16% Similarity=0.294 Sum_probs=31.7
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHc
Q 012985 196 TAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSK 241 (452)
Q Consensus 196 ~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~ 241 (452)
.++.+...+++...++| ..+++|+|+|-||..+-.+|..+..+
T Consensus 10 ~~~~i~~~~~~~~~~~p---~~~i~v~GHSlGg~lA~l~a~~~~~~ 52 (153)
T cd00741 10 LANLVLPLLKSALAQYP---DYKIHVTGHSLGGALAGLAGLDLRGR 52 (153)
T ss_pred HHHHHHHHHHHHHHHCC---CCeEEEEEcCHHHHHHHHHHHHHHhc
Confidence 34444455555555555 56899999999999999999888765
No 99
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=79.77 E-value=23 Score=35.66 Aligned_cols=105 Identities=22% Similarity=0.298 Sum_probs=67.9
Q ss_pred CCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChhh
Q 012985 117 SSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNT 196 (452)
Q Consensus 117 ~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~ 196 (452)
.++..+|+=++|-||+-= -|-.+=|... ..---++=|--| ||.++....+. .-+
T Consensus 32 gs~~gTVv~~hGsPGSH~----DFkYi~~~l~--------------~~~iR~I~iN~P---Gf~~t~~~~~~-----~~~ 85 (297)
T PF06342_consen 32 GSPLGTVVAFHGSPGSHN----DFKYIRPPLD--------------EAGIRFIGINYP---GFGFTPGYPDQ-----QYT 85 (297)
T ss_pred CCCceeEEEecCCCCCcc----chhhhhhHHH--------------HcCeEEEEeCCC---CCCCCCCCccc-----ccC
Confidence 345568999999999832 2222211110 122346677788 77776554332 334
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccc
Q 012985 197 AEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (452)
Q Consensus 197 A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~ 259 (452)
.++-..|..+++++- +.+ ..+.+.|||-|+--+-++|... ++.|+++.||.
T Consensus 86 n~er~~~~~~ll~~l-~i~-~~~i~~gHSrGcenal~la~~~----------~~~g~~lin~~ 136 (297)
T PF06342_consen 86 NEERQNFVNALLDEL-GIK-GKLIFLGHSRGCENALQLAVTH----------PLHGLVLINPP 136 (297)
T ss_pred hHHHHHHHHHHHHHc-CCC-CceEEEEeccchHHHHHHHhcC----------ccceEEEecCC
Confidence 556667888888876 344 5788889999999888888643 36788887775
No 100
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=79.46 E-value=2.7 Score=40.23 Aligned_cols=44 Identities=14% Similarity=0.217 Sum_probs=35.3
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHH
Q 012985 195 NTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILS 240 (452)
Q Consensus 195 ~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~ 240 (452)
..-.|+..++..|++.++ ++|||.|+|||=|+..+-.|-+.-.+
T Consensus 75 ~ay~DV~~AF~~yL~~~n--~GRPfILaGHSQGs~~l~~LL~e~~~ 118 (207)
T PF11288_consen 75 LAYSDVRAAFDYYLANYN--NGRPFILAGHSQGSMHLLRLLKEEIA 118 (207)
T ss_pred hhHHHHHHHHHHHHHhcC--CCCCEEEEEeChHHHHHHHHHHHHhc
Confidence 355688899999999887 58999999999999877766655443
No 101
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=79.26 E-value=4.1 Score=38.81 Aligned_cols=58 Identities=16% Similarity=0.287 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccccc
Q 012985 198 EDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWID 261 (452)
Q Consensus 198 ~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id 261 (452)
+++...++...+++| +.+++++|||-||-.+-.+|..+.++. ...+++.+..|.|-+.
T Consensus 112 ~~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~---~~~~i~~~tFg~P~vg 169 (229)
T cd00519 112 NQVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRG---PGSDVTVYTFGQPRVG 169 (229)
T ss_pred HHHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhC---CCCceEEEEeCCCCCC
Confidence 344455555555555 567999999999999988888877652 2345778888877764
No 102
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=78.98 E-value=2.5 Score=39.90 Aligned_cols=74 Identities=14% Similarity=0.048 Sum_probs=41.7
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccccccccccc------ch
Q 012985 196 TAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNLCTK------GM 269 (452)
Q Consensus 196 ~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~~~~~~------~~ 269 (452)
.++.+.+++....+.. ...++++|.|-|-||...-.++.+ . .-.|.|++.-+|++-...... .-
T Consensus 86 s~~~l~~li~~~~~~~--i~~~ri~l~GFSQGa~~al~~~l~---~-----p~~~~gvv~lsG~~~~~~~~~~~~~~~~~ 155 (216)
T PF02230_consen 86 SAERLDELIDEEVAYG--IDPSRIFLGGFSQGAAMALYLALR---Y-----PEPLAGVVALSGYLPPESELEDRPEALAK 155 (216)
T ss_dssp HHHHHHHHHHHHHHTT----GGGEEEEEETHHHHHHHHHHHC---T-----SSTSSEEEEES---TTGCCCHCCHCCCCT
T ss_pred HHHHHHHHHHHHHHcC--CChhheehhhhhhHHHHHHHHHHH---c-----CcCcCEEEEeeccccccccccccccccCC
Confidence 3444445555444332 456789999999999877666632 2 226889999999876543322 12
Q ss_pred hhhhhccCCC
Q 012985 270 FDFFWTHALN 279 (452)
Q Consensus 270 ~~y~~~~glI 279 (452)
...++.||--
T Consensus 156 ~pi~~~hG~~ 165 (216)
T PF02230_consen 156 TPILIIHGDE 165 (216)
T ss_dssp S-EEEEEETT
T ss_pred CcEEEEecCC
Confidence 3466677643
No 103
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=78.54 E-value=3.5 Score=43.28 Aligned_cols=61 Identities=20% Similarity=0.230 Sum_probs=46.1
Q ss_pred hhHHHHHHHHHHHHHHCCCCCC-CCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccccccc
Q 012985 195 NTAEDSYTFLVNWFERFPQYKN-RDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDN 263 (452)
Q Consensus 195 ~~A~d~~~fL~~f~~~fPey~~-~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~~ 263 (452)
.+|.|...+|..-.++||..+. .|+.+.|.|||| |...|+.+|.= -.+.||+=-.++.-|.
T Consensus 161 MqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~aP-------~~~~~~iDns~~~~p~ 222 (403)
T PF11144_consen 161 MQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKIAP-------WLFDGVIDNSSYALPP 222 (403)
T ss_pred HHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhhCc-------cceeEEEecCccccch
Confidence 4799999999999999999986 799999999976 66666666633 3366666555555553
No 104
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=78.45 E-value=12 Score=44.74 Aligned_cols=102 Identities=11% Similarity=0.213 Sum_probs=64.3
Q ss_pred CCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChhhHHH
Q 012985 120 KPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAED 199 (452)
Q Consensus 120 ~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d 199 (452)
.|-++.++|+.|.+.. |..+.+. + .....++-+|.| |+.... ... .+-++.|++
T Consensus 1068 ~~~l~~lh~~~g~~~~-~~~l~~~-----------l-------~~~~~v~~~~~~---g~~~~~-~~~---~~l~~la~~ 1121 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQ-FSVLSRY-----------L-------DPQWSIYGIQSP---RPDGPM-QTA---TSLDEVCEA 1121 (1296)
T ss_pred CCCeEEecCCCCchHH-HHHHHHh-----------c-------CCCCcEEEEECC---CCCCCC-CCC---CCHHHHHHH
Confidence 4668889998887666 6554421 1 234677888988 433221 111 245567777
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecc
Q 012985 200 SYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNA 258 (452)
Q Consensus 200 ~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg 258 (452)
+...++. ..| ..+++++|+|+||..+-.+|.++.++. ..+..+++-++
T Consensus 1122 ~~~~i~~---~~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~~-----~~v~~l~l~~~ 1169 (1296)
T PRK10252 1122 HLATLLE---QQP---HGPYHLLGYSLGGTLAQGIAARLRARG-----EEVAFLGLLDT 1169 (1296)
T ss_pred HHHHHHh---hCC---CCCEEEEEechhhHHHHHHHHHHHHcC-----CceeEEEEecC
Confidence 7666653 233 358999999999999999998876642 23455555444
No 105
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=76.64 E-value=0.63 Score=47.70 Aligned_cols=71 Identities=14% Similarity=0.190 Sum_probs=48.3
Q ss_pred ccceeEEEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHH
Q 012985 164 NVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILS 240 (452)
Q Consensus 164 ~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~ 240 (452)
...|||.||--.+..-.|.... .+...+++.+-.||+...+.+ .+...+++|+|+|-|+|.+-.+++++-.
T Consensus 103 ~d~NVI~VDWs~~a~~~Y~~a~-----~n~~~vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 103 GDYNVIVVDWSRGASNNYPQAV-----ANTRLVGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp S-EEEEEEE-HHHHSS-HHHHH-----HHHHHHHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred CCceEEEEcchhhccccccchh-----hhHHHHHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 4679999998666554443211 244567788888888776443 2335689999999999999999988766
No 106
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=76.30 E-value=9.4 Score=40.26 Aligned_cols=61 Identities=25% Similarity=0.353 Sum_probs=40.0
Q ss_pred cceeEEEe-------cCCCccccccCCC-CCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEecccccc
Q 012985 165 VANVLFLE-------TPAGVGFSYSNTS-SDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGH 229 (452)
Q Consensus 165 ~anvlfiD-------qPvGvGfSy~~~~-~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~ 229 (452)
.|-|+|+| +|.|.- ||.+.. -.|- +.+|+-.|+.. |..++++-+.=+..++..+|-||||+
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~-s~k~~~hlgyL--tseQALADfA~-ll~~lK~~~~a~~~pvIafGGSYGGM 179 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQ-SYKDARHLGYL--TSEQALADFAE-LLTFLKRDLSAEASPVIAFGGSYGGM 179 (492)
T ss_pred CceEEEeehhccccCCCCcch-hccChhhhccc--cHHHHHHHHHH-HHHHHhhccccccCcEEEecCchhhH
Confidence 46788887 587777 665432 2332 55555555554 45567665544677999999999994
No 107
>PLN02571 triacylglycerol lipase
Probab=75.34 E-value=7.2 Score=41.20 Aligned_cols=67 Identities=10% Similarity=0.169 Sum_probs=50.7
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcC-C-----CCceeeeeeeEEecccccc
Q 012985 195 NTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKN-T-----SKTIINLKGIAIGNAWIDD 262 (452)
Q Consensus 195 ~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n-~-----~~~~inLkGI~IGNg~id~ 262 (452)
.+.++++..|+.+.+++|.. ..+++|+|||-||-.+-..|..|.... . ....+++..+..|.|-+..
T Consensus 205 Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVGN 277 (413)
T PLN02571 205 SARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVGD 277 (413)
T ss_pred hHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCccC
Confidence 45678889999999988865 347999999999999988888887643 1 1123567777888877764
No 108
>COG0400 Predicted esterase [General function prediction only]
Probab=75.18 E-value=11 Score=36.14 Aligned_cols=150 Identities=16% Similarity=0.154 Sum_probs=80.5
Q ss_pred EEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCC
Q 012985 106 LFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTS 185 (452)
Q Consensus 106 lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~ 185 (452)
.|+..+++.. ...+|++|||+|= |.....+..+ |-.+.++..-+..|. .+. ..+....|+.....
T Consensus 5 ~~~~~i~~~~-~p~~~~iilLHG~-Ggde~~~~~~----~~~~~P~~~~is~rG-------~v~--~~g~~~~f~~~~~~ 69 (207)
T COG0400 5 PFIPRIEKPG-DPAAPLLILLHGL-GGDELDLVPL----PELILPNATLVSPRG-------PVA--ENGGPRFFRRYDEG 69 (207)
T ss_pred cccccccCCC-CCCCcEEEEEecC-CCChhhhhhh----hhhcCCCCeEEcCCC-------Ccc--ccCcccceeecCCC
Confidence 3444455543 4567999999982 4444322111 112333321122111 111 22334445544333
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccccccccc
Q 012985 186 SDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNLC 265 (452)
Q Consensus 186 ~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~~~~ 265 (452)
. +...+....++.+.+||....++.. ....++++.|-|-|+.++-.+... . +-.++|+++=.|..-+...
T Consensus 70 ~-~d~edl~~~~~~~~~~l~~~~~~~g-i~~~~ii~~GfSqGA~ial~~~l~---~-----~~~~~~ail~~g~~~~~~~ 139 (207)
T COG0400 70 S-FDQEDLDLETEKLAEFLEELAEEYG-IDSSRIILIGFSQGANIALSLGLT---L-----PGLFAGAILFSGMLPLEPE 139 (207)
T ss_pred c-cchhhHHHHHHHHHHHHHHHHHHhC-CChhheEEEecChHHHHHHHHHHh---C-----chhhccchhcCCcCCCCCc
Confidence 2 1112334567778888888887763 345789999999999877665533 2 3357888887777655432
Q ss_pred ---ccchhhhhhccCCCC
Q 012985 266 ---TKGMFDFFWTHALNS 280 (452)
Q Consensus 266 ---~~~~~~y~~~~glIs 280 (452)
.......+..||--|
T Consensus 140 ~~~~~~~~pill~hG~~D 157 (207)
T COG0400 140 LLPDLAGTPILLSHGTED 157 (207)
T ss_pred cccccCCCeEEEeccCcC
Confidence 223344555565433
No 109
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=73.92 E-value=3.6 Score=38.69 Aligned_cols=52 Identities=21% Similarity=0.240 Sum_probs=36.7
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccccccccc
Q 012985 201 YTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNLCT 266 (452)
Q Consensus 201 ~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~~~~~ 266 (452)
...+.+..+.. ....+.|+|.|-||.|+-.+|.+. +++. ++.||.+.|....
T Consensus 46 ~~~l~~~i~~~---~~~~~~liGSSlGG~~A~~La~~~----------~~~a-vLiNPav~p~~~l 97 (187)
T PF05728_consen 46 IAQLEQLIEEL---KPENVVLIGSSLGGFYATYLAERY----------GLPA-VLINPAVRPYELL 97 (187)
T ss_pred HHHHHHHHHhC---CCCCeEEEEEChHHHHHHHHHHHh----------CCCE-EEEcCCCCHHHHH
Confidence 34444444433 455699999999999999998754 3555 6679999986543
No 110
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=73.09 E-value=7.5 Score=41.47 Aligned_cols=40 Identities=15% Similarity=0.088 Sum_probs=31.2
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHH
Q 012985 194 NNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAY 236 (452)
Q Consensus 194 ~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~ 236 (452)
++..+++.+.++..+++.+ .+++.|+|||.||-++=.++.
T Consensus 142 ~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 142 PETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred HHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHHHHHH
Confidence 3467788888888887654 679999999999977666554
No 111
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=72.89 E-value=14 Score=42.31 Aligned_cols=45 Identities=9% Similarity=-0.000 Sum_probs=32.4
Q ss_pred CChhhHHHHHHHHHHHH------H---HCCCCCCCCEEEEeccccccccHHHHH
Q 012985 192 GDNNTAEDSYTFLVNWF------E---RFPQYKNRDFFITGESYAGHYVPQLAY 236 (452)
Q Consensus 192 ~~~~~A~d~~~fL~~f~------~---~fPey~~~~~yi~GESYgG~yvP~lA~ 236 (452)
+-++.+.|++.+....- + .+..+...++++.|||.||..+..++.
T Consensus 521 n~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~ 574 (792)
T TIGR03502 521 NLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIA 574 (792)
T ss_pred CHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHH
Confidence 44677778776655432 1 233466789999999999999888884
No 112
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=71.35 E-value=9 Score=39.46 Aligned_cols=61 Identities=28% Similarity=0.384 Sum_probs=39.3
Q ss_pred ccceeEEEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHH-CCCCCCCCEEEEeccccccccHH
Q 012985 164 NVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFER-FPQYKNRDFFITGESYAGHYVPQ 233 (452)
Q Consensus 164 ~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~-fPey~~~~~yi~GESYgG~yvP~ 233 (452)
..+|||..--| |||+|.+..+ -++.++| ++.+.++++. .-.-+.+++.+.|+|-||-....
T Consensus 170 ~~aNvl~fNYp-GVg~S~G~~s-------~~dLv~~-~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~ 231 (365)
T PF05677_consen 170 LGANVLVFNYP-GVGSSTGPPS-------RKDLVKD-YQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAE 231 (365)
T ss_pred cCCcEEEECCC-ccccCCCCCC-------HHHHHHH-HHHHHHHHHhcccCCChheEEEeeccccHHHHHH
Confidence 45899999965 9999966432 1233333 2334444443 32346689999999999976554
No 113
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=69.31 E-value=7 Score=41.14 Aligned_cols=73 Identities=14% Similarity=0.160 Sum_probs=47.4
Q ss_pred CCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccccccccccchh
Q 012985 191 PGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNLCTKGMF 270 (452)
Q Consensus 191 ~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~~~~~~~~~ 270 (452)
.+.+|+-+|+..|++.+-+++....+.|+.++|-||||.-..-+-.+--+ -+.|..--+|.+....++..|.
T Consensus 87 Lt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~--------~~~ga~ASSapv~a~~df~~y~ 158 (434)
T PF05577_consen 87 LTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPH--------LFDGAWASSAPVQAKVDFWEYF 158 (434)
T ss_dssp -SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TT--------T-SEEEEET--CCHCCTTTHHH
T ss_pred cCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCC--------eeEEEEeccceeeeecccHHHH
Confidence 37789999999999998888876677899999999999655444433211 1556666666666655555444
Q ss_pred h
Q 012985 271 D 271 (452)
Q Consensus 271 ~ 271 (452)
+
T Consensus 159 ~ 159 (434)
T PF05577_consen 159 E 159 (434)
T ss_dssp H
T ss_pred H
Confidence 4
No 114
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=69.28 E-value=5.8 Score=38.17 Aligned_cols=73 Identities=16% Similarity=0.074 Sum_probs=51.1
Q ss_pred CCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeE
Q 012985 175 AGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIA 254 (452)
Q Consensus 175 vGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~ 254 (452)
+-|||-+++... .-+++-.++..+++--|+.+|.-+ .+-+.|||-|.|-+.++..++.. -.+.|++
T Consensus 101 asvgY~l~~q~h-----tL~qt~~~~~~gv~filk~~~n~k--~l~~gGHSaGAHLa~qav~R~r~-------prI~gl~ 166 (270)
T KOG4627|consen 101 ASVGYNLCPQVH-----TLEQTMTQFTHGVNFILKYTENTK--VLTFGGHSAGAHLAAQAVMRQRS-------PRIWGLI 166 (270)
T ss_pred EEeccCcCcccc-----cHHHHHHHHHHHHHHHHHhcccce--eEEEcccchHHHHHHHHHHHhcC-------chHHHHH
Confidence 456888876442 557889999999998889998543 59999999999877666655322 2355555
Q ss_pred Eeccccc
Q 012985 255 IGNAWID 261 (452)
Q Consensus 255 IGNg~id 261 (452)
+-.|+-+
T Consensus 167 l~~GvY~ 173 (270)
T KOG4627|consen 167 LLCGVYD 173 (270)
T ss_pred HHhhHhh
Confidence 5555543
No 115
>PLN02753 triacylglycerol lipase
Probab=68.17 E-value=13 Score=40.48 Aligned_cols=71 Identities=17% Similarity=0.211 Sum_probs=52.1
Q ss_pred CChhhHHHHHHHHHHHHHHCCC--CCCCCEEEEeccccccccHHHHHHHHHcC----CCCceeeeeeeEEecccccc
Q 012985 192 GDNNTAEDSYTFLVNWFERFPQ--YKNRDFFITGESYAGHYVPQLAYTILSKN----TSKTIINLKGIAIGNAWIDD 262 (452)
Q Consensus 192 ~~~~~A~d~~~fL~~f~~~fPe--y~~~~~yi~GESYgG~yvP~lA~~I~~~n----~~~~~inLkGI~IGNg~id~ 262 (452)
+...+.+++...++...+++|. +....++|+|||-||-.+-..|..|.+.. .....+++.-+..|.|-+..
T Consensus 285 ~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVGN 361 (531)
T PLN02753 285 AKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVGN 361 (531)
T ss_pred chhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCccC
Confidence 3345788899999999988863 23568999999999999999888887643 11224566677777776654
No 116
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=67.86 E-value=28 Score=33.44 Aligned_cols=35 Identities=20% Similarity=0.200 Sum_probs=25.2
Q ss_pred hhHHHHHHHHHHHHHHC--CCCCCCCEEEEecccccc
Q 012985 195 NTAEDSYTFLVNWFERF--PQYKNRDFFITGESYAGH 229 (452)
Q Consensus 195 ~~A~d~~~fL~~f~~~f--Pey~~~~~yi~GESYgG~ 229 (452)
+.++.+.+.++..++.. ..-..+++.|+|||.||.
T Consensus 61 ~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGl 97 (225)
T PF07819_consen 61 RQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGL 97 (225)
T ss_pred HHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhH
Confidence 45666666777666654 223577899999999995
No 117
>PLN02719 triacylglycerol lipase
Probab=67.35 E-value=13 Score=40.20 Aligned_cols=69 Identities=17% Similarity=0.273 Sum_probs=50.8
Q ss_pred hhhHHHHHHHHHHHHHHCCCC--CCCCEEEEeccccccccHHHHHHHHHcC-C---CCceeeeeeeEEecccccc
Q 012985 194 NNTAEDSYTFLVNWFERFPQY--KNRDFFITGESYAGHYVPQLAYTILSKN-T---SKTIINLKGIAIGNAWIDD 262 (452)
Q Consensus 194 ~~~A~d~~~fL~~f~~~fPey--~~~~~yi~GESYgG~yvP~lA~~I~~~n-~---~~~~inLkGI~IGNg~id~ 262 (452)
..+.+++...++...+.+|.+ ....++|+|||-||-.+--.|..|.+.. . ....+++.-+..|.|-+..
T Consensus 273 ~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVGN 347 (518)
T PLN02719 273 FSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVGN 347 (518)
T ss_pred hhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCccC
Confidence 356778899999999999865 3357999999999999999998887753 1 1123455567777776654
No 118
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=66.07 E-value=24 Score=35.94 Aligned_cols=145 Identities=13% Similarity=0.105 Sum_probs=68.0
Q ss_pred CCceEEEEEEecCCCCCCCCeEEEECCCCChhhhhh--hhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccc
Q 012985 102 AGRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGY--GAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGF 179 (452)
Q Consensus 102 ~~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~--g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGf 179 (452)
.|..++=|+..-+......|.||.++|..|.+.... -.+...|=..+..+-...- .+..+..-...+..-|+
T Consensus 65 ~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~rGqg------~~~~d~~~~~~~~~~g~ 138 (320)
T PF05448_consen 65 DGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDVRGQG------GRSPDYRGSSGGTLKGH 138 (320)
T ss_dssp GGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHHHHHTT-EEEEE--TTTS------SSS-B-SSBSSS-SSSS
T ss_pred CCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccccccCCeEEEEecCCCCC------CCCCCccccCCCCCccH
Confidence 456677676665544578899999999877754411 1233444333322211010 00000000011111122
Q ss_pred cccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccc
Q 012985 180 SYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (452)
Q Consensus 180 Sy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~ 259 (452)
-.-...+.-.+.--.....|.+..+ .|+...|+.-.+.+.++|+|-||...-.+|.. +. .++.++...|+
T Consensus 139 ~~~g~~~~~e~~yyr~~~~D~~rav-d~l~slpevD~~rI~v~G~SqGG~lal~~aaL--d~-------rv~~~~~~vP~ 208 (320)
T PF05448_consen 139 ITRGIDDNPEDYYYRRVYLDAVRAV-DFLRSLPEVDGKRIGVTGGSQGGGLALAAAAL--DP-------RVKAAAADVPF 208 (320)
T ss_dssp TTTTTTS-TTT-HHHHHHHHHHHHH-HHHHTSTTEEEEEEEEEEETHHHHHHHHHHHH--SS-------T-SEEEEESES
T ss_pred HhcCccCchHHHHHHHHHHHHHHHH-HHHHhCCCcCcceEEEEeecCchHHHHHHHHh--Cc-------cccEEEecCCC
Confidence 1110000000000012234444433 35678999989999999999999887666652 22 27888888777
Q ss_pred ccc
Q 012985 260 IDD 262 (452)
Q Consensus 260 id~ 262 (452)
+.+
T Consensus 209 l~d 211 (320)
T PF05448_consen 209 LCD 211 (320)
T ss_dssp SSS
T ss_pred ccc
Confidence 655
No 119
>KOG3101 consensus Esterase D [General function prediction only]
Probab=65.83 E-value=58 Score=31.63 Aligned_cols=152 Identities=17% Similarity=0.247 Sum_probs=73.3
Q ss_pred ceeEeeEEEecCC----CCceEEEEEEecCCCCC--CCCeEEEECCCCChhhh------hh-hhhhhcCCeeEcCCCC--
Q 012985 89 FDQYAGYLTVDPK----AGRALFYYFVESPQSSS--SKPLVLWLNGGPGCSSL------GY-GAMEELGPFRVNSDGK-- 153 (452)
Q Consensus 89 ~~~ysGyv~V~~~----~~~~lFy~f~ea~~~~~--~~Pl~lWlnGGPGcSS~------~~-g~~~E~GP~~v~~~~~-- 153 (452)
.+++-|+.-|-+. .+-.|=|-.+-....++ .-|+++||.| --|.-- |+ -.-.+.|=-.|.+|..
T Consensus 7 nk~f~G~q~vy~H~S~tl~c~Mtf~vylPp~a~~~k~~P~lf~LSG-LTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPR 85 (283)
T KOG3101|consen 7 NKCFGGRQKVYKHNSNTLKCSMTFGVYLPPDAPRGKRCPVLFYLSG-LTCTHENFIEKSGFQQQASKHGLAVVAPDTSPR 85 (283)
T ss_pred cccccceeeeeeccccccccceEEEEecCCCcccCCcCceEEEecC-CcccchhhHhhhhHHHhHhhcCeEEECCCCCCC
Confidence 5667777777542 23356665444333343 3599999997 355321 00 1112455556666531
Q ss_pred --ccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHH----HHH-HCCCCCCCCEEEEeccc
Q 012985 154 --TLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVN----WFE-RFPQYKNRDFFITGESY 226 (452)
Q Consensus 154 --~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~----f~~-~fPey~~~~~yi~GESY 226 (452)
.+.-.+-|| |==.|.||= .+.+..-.. .. -.+|..+.+ -+. .+-..-..+.-|+|+|.
T Consensus 86 G~~v~g~~esw---------DFG~GAGFY-vnAt~epw~-~~----yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSM 150 (283)
T KOG3101|consen 86 GVEVAGDDESW---------DFGQGAGFY-VNATQEPWA-KH----YRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSM 150 (283)
T ss_pred ccccCCCcccc---------cccCCceeE-EecccchHh-hh----hhHHHHHHHHHHHHhccccccccchhcceecccc
Confidence 222334466 334566663 332221110 11 123333322 111 22223334689999999
Q ss_pred cccccHHHHHHHHHcCCCCceeeeeeeEEecccccccc
Q 012985 227 AGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNL 264 (452)
Q Consensus 227 gG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~~~ 264 (452)
|||=+-.++- +| .=..|++.-=.|..+|..
T Consensus 151 GGhGAl~~~L----kn----~~kykSvSAFAPI~NP~~ 180 (283)
T KOG3101|consen 151 GGHGALTIYL----KN----PSKYKSVSAFAPICNPIN 180 (283)
T ss_pred CCCceEEEEE----cC----cccccceeccccccCccc
Confidence 9985433321 12 113556655556666644
No 120
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=64.05 E-value=29 Score=31.14 Aligned_cols=76 Identities=17% Similarity=0.245 Sum_probs=45.4
Q ss_pred cceeEEEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCC
Q 012985 165 VANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTS 244 (452)
Q Consensus 165 ~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~ 244 (452)
..+++.+|.| |+..+... . ...+..++.....+. ...+ ..++.++|+|+||..+-.+|..+.++.
T Consensus 25 ~~~v~~~~~~---g~~~~~~~---~-~~~~~~~~~~~~~l~---~~~~---~~~~~l~g~s~Gg~~a~~~a~~l~~~~-- 89 (212)
T smart00824 25 RRDVSALPLP---GFGPGEPL---P-ASADALVEAQAEAVL---RAAG---GRPFVLVGHSSGGLLAHAVAARLEARG-- 89 (212)
T ss_pred CccEEEecCC---CCCCCCCC---C-CCHHHHHHHHHHHHH---HhcC---CCCeEEEEECHHHHHHHHHHHHHHhCC--
Confidence 4678889876 44322211 1 122334444444333 3333 568999999999999999999877652
Q ss_pred CceeeeeeeEEecc
Q 012985 245 KTIINLKGIAIGNA 258 (452)
Q Consensus 245 ~~~inLkGI~IGNg 258 (452)
...+++++.++
T Consensus 90 ---~~~~~l~~~~~ 100 (212)
T smart00824 90 ---IPPAAVVLLDT 100 (212)
T ss_pred ---CCCcEEEEEcc
Confidence 23556655443
No 121
>PF03283 PAE: Pectinacetylesterase
Probab=63.70 E-value=64 Score=33.52 Aligned_cols=150 Identities=20% Similarity=0.223 Sum_probs=76.8
Q ss_pred CceEEEEEEecCCCCCCCCeEEEECCCCChhhhhh---hhhhhcCCee-----EcCCC---CccccCCCCccccceeEEE
Q 012985 103 GRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGY---GAMEELGPFR-----VNSDG---KTLYRNEYAWNNVANVLFL 171 (452)
Q Consensus 103 ~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~---g~~~E~GP~~-----v~~~~---~~l~~N~~sW~~~anvlfi 171 (452)
|..-.|++-+.. ...++-++|.|.||=.|.+..- -...++|-.. +..+| ..-..||.=++ .|++||
T Consensus 34 GS~~~yy~~~g~-g~~s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~~--wN~V~v 110 (361)
T PF03283_consen 34 GSPPGYYFRPGS-GSGSNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFYN--WNHVFV 110 (361)
T ss_pred CCCCcEEEccCC-CCCCceEEEEeccchhcCChhHHhhhccCccccccchhhhccccccccCCcccCCcccc--ccEEEE
Confidence 344445555542 3557789999999988877410 1122334322 11111 11234553222 677888
Q ss_pred ecCCCccccccCCCCCCCCCC--ChhhHHHHHHH-HHHHHHH-CCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCce
Q 012985 172 ETPAGVGFSYSNTSSDYSNPG--DNNTAEDSYTF-LVNWFER-FPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTI 247 (452)
Q Consensus 172 DqPvGvGfSy~~~~~~~~~~~--~~~~A~d~~~f-L~~f~~~-fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~ 247 (452)
= --+|=+++-+.......+ -.-....+++. |...++. +++ ..++.|+|.|-||.-+..-+..|.+.=. ..
T Consensus 111 p--YC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG~g~~~~~d~~~~~lp--~~ 184 (361)
T PF03283_consen 111 P--YCDGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGGLGAILHADYVRDRLP--SS 184 (361)
T ss_pred E--ecCCccccCcccccccCCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHHHHHHHHHHHHHHHhc--cC
Confidence 4 444555533221111001 11223334444 4444444 553 4579999999999888777777766531 13
Q ss_pred eeeeeeEEeccccc
Q 012985 248 INLKGIAIGNAWID 261 (452)
Q Consensus 248 inLkGI~IGNg~id 261 (452)
..++++.=..-++|
T Consensus 185 ~~v~~~~DsG~f~d 198 (361)
T PF03283_consen 185 VKVKCLSDSGFFLD 198 (361)
T ss_pred ceEEEecccccccc
Confidence 45555544444444
No 122
>PRK04940 hypothetical protein; Provisional
Probab=63.10 E-value=11 Score=35.36 Aligned_cols=40 Identities=10% Similarity=0.169 Sum_probs=31.6
Q ss_pred CCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccccccccccc
Q 012985 217 RDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNLCTK 267 (452)
Q Consensus 217 ~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~~~~~~ 267 (452)
.++.|+|.|-||.|+-.||.+- .+|.|+ .||.+.|.....
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~----------g~~aVL-iNPAv~P~~~L~ 99 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC----------GIRQVI-FNPNLFPEENME 99 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH----------CCCEEE-ECCCCChHHHHH
Confidence 4799999999999999999763 366664 599999975433
No 123
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=61.66 E-value=81 Score=33.32 Aligned_cols=35 Identities=9% Similarity=0.071 Sum_probs=23.6
Q ss_pred CCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccc
Q 012985 217 RDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (452)
Q Consensus 217 ~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~ 259 (452)
....|+|.|+||--.-.+|-.-.+ .+.+++.-+|-
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd--------~Fg~v~s~Sgs 322 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPE--------RFGCVLSQSGS 322 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCcc--------cccEEEEeccc
Confidence 358999999999877666643222 25666666654
No 124
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=61.03 E-value=12 Score=39.16 Aligned_cols=49 Identities=10% Similarity=-0.088 Sum_probs=33.2
Q ss_pred HcCCeEEEEecCCCcccCchhHHHHHHhCCCCCCcceeceEeCCeEEEEEe-cCcccc
Q 012985 394 ASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGWWICARV-QGSDIH 450 (452)
Q Consensus 394 ~~girVlIYsGD~D~i~p~~Gt~~wi~~L~w~~~~~w~pW~~~g~~~~~~~-~g~~~~ 450 (452)
+-..+|+|..|+.|.++|..-.+...+.+.=.+ .+.+++++.+ .||+.+
T Consensus 321 ~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~--------~~a~l~~I~s~~GH~~~ 370 (389)
T PRK06765 321 NIEANVLMIPCKQDLLQPPRYNYKMVDILQKQG--------KYAEVYEIESINGHMAG 370 (389)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcC--------CCeEEEEECCCCCcchh
Confidence 336899999999999999888777666553111 1234455653 788754
No 125
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=60.95 E-value=13 Score=35.25 Aligned_cols=105 Identities=14% Similarity=0.236 Sum_probs=69.4
Q ss_pred CCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChhhHHH
Q 012985 120 KPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAED 199 (452)
Q Consensus 120 ~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d 199 (452)
+-++|.+.|-=|...++ -.+.+ .|.. +=..|+=||++ .|--.. -+-+++|.|
T Consensus 2 Dt~~v~~SGDgGw~~~d-~~~a~-----------~l~~------~G~~VvGvdsl-----~Yfw~~-----rtP~~~a~D 53 (192)
T PF06057_consen 2 DTLAVFFSGDGGWRDLD-KQIAE-----------ALAK------QGVPVVGVDSL-----RYFWSE-----RTPEQTAAD 53 (192)
T ss_pred CEEEEEEeCCCCchhhh-HHHHH-----------HHHH------CCCeEEEechH-----HHHhhh-----CCHHHHHHH
Confidence 44778888865776654 22211 1111 22456666655 443222 155789999
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccc
Q 012985 200 SYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (452)
Q Consensus 200 ~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~ 259 (452)
+-+.++.+.++. +.++|.|+|-|+|.-.+|.+..++-..- +=.+++|.+-.+-
T Consensus 54 l~~~i~~y~~~w---~~~~vvLiGYSFGADvlP~~~nrLp~~~----r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 54 LARIIRHYRARW---GRKRVVLIGYSFGADVLPFIYNRLPAAL----RARVAQVVLLSPS 106 (192)
T ss_pred HHHHHHHHHHHh---CCceEEEEeecCCchhHHHHHhhCCHHH----HhheeEEEEeccC
Confidence 999999988866 5789999999999999999998875542 3346777664443
No 126
>PLN03082 Iron-sulfur cluster assembly; Provisional
Probab=60.57 E-value=5.4 Score=36.78 Aligned_cols=65 Identities=25% Similarity=0.287 Sum_probs=46.6
Q ss_pred CCCCeEEEECCCCChhhhhhhhhhhcC----CeeEcCCCCccccCCCC--ccccceeEEEecCCCccccc-cC
Q 012985 118 SSKPLVLWLNGGPGCSSLGYGAMEELG----PFRVNSDGKTLYRNEYA--WNNVANVLFLETPAGVGFSY-SN 183 (452)
Q Consensus 118 ~~~Pl~lWlnGGPGcSS~~~g~~~E~G----P~~v~~~~~~l~~N~~s--W~~~anvlfiDqPvGvGfSy-~~ 183 (452)
+..+|=|-+.|| |||++.|++-.+.- -..+..+|-++.-.+.+ +.+-+-|=|+|...|.||-+ .|
T Consensus 76 ~~~~LRl~V~~g-GCSG~~Y~~~ld~~~~~~D~v~e~~Gv~vvVD~~s~~~L~Gs~IDYve~l~~~gF~f~~N 147 (163)
T PLN03082 76 EDKMLRLSVETG-GCSGFQYVFELDDKTNSDDRVFEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFVVSTN 147 (163)
T ss_pred CCceEEEEEecC-CCCCceeeeEEccCCCCCCEEEecCCeEEEECHHHHHHhCCCEEEeecCCCCCeeEEecC
Confidence 456899999999 99998765543322 24555566566666655 55667899999999999998 44
No 127
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=59.74 E-value=29 Score=33.54 Aligned_cols=87 Identities=14% Similarity=0.074 Sum_probs=55.7
Q ss_pred ceeEEEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCC
Q 012985 166 ANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSK 245 (452)
Q Consensus 166 anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~ 245 (452)
.+...|+-|++.+.=-+-....+. .+-.+-++.+...+..+.. ..+++.|+|.|-|+.-+-...+++.+... .
T Consensus 3 ~~~~~V~YPa~f~P~~g~~~~t~~-~Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~-~ 75 (225)
T PF08237_consen 3 YNVVAVDYPASFWPVTGIGSPTYD-ESVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGD-P 75 (225)
T ss_pred cceEEecCCchhcCcCCCCCCccc-hHHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCC-C
Confidence 355667777754431111111122 1444556667777776554 57899999999999988888888877541 1
Q ss_pred ceeeeeeeEEeccc
Q 012985 246 TIINLKGIAIGNAW 259 (452)
Q Consensus 246 ~~inLkGI~IGNg~ 259 (452)
..=+|+-+++||+-
T Consensus 76 ~~~~l~fVl~gnP~ 89 (225)
T PF08237_consen 76 PPDDLSFVLIGNPR 89 (225)
T ss_pred CcCceEEEEecCCC
Confidence 11468899999985
No 128
>PRK14566 triosephosphate isomerase; Provisional
Probab=58.71 E-value=20 Score=35.62 Aligned_cols=62 Identities=18% Similarity=0.363 Sum_probs=47.7
Q ss_pred ChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccccccc
Q 012985 193 DNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDN 263 (452)
Q Consensus 193 ~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~~ 263 (452)
+.+.|+++..|+++++...-+.....+=|. |||.--|.-+..|+... ++.|++||.+-+|+.
T Consensus 187 t~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~------dIDG~LVGgASL~~~ 248 (260)
T PRK14566 187 TPEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQP------DVDGGLIGGASLNST 248 (260)
T ss_pred CHHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcCC------CCCeEEechHhcCHH
Confidence 356799999999999975422212234444 99999999999998764 589999999999873
No 129
>PRK14567 triosephosphate isomerase; Provisional
Probab=58.21 E-value=22 Score=35.20 Aligned_cols=61 Identities=20% Similarity=0.300 Sum_probs=47.3
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccccccc
Q 012985 194 NNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDN 263 (452)
Q Consensus 194 ~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~~ 263 (452)
.+.++++..|+++++..+-+-....+=|. |||.--|.=+..|+... ++.|++||.+-+++.
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~~------diDG~LVGgasL~~~ 238 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSLP------DVDGGLIGGASLKAA 238 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcCC------CCCEEEeehhhhcHH
Confidence 56899999999999987522112234444 99999999999998764 589999999998863
No 130
>PLN02761 lipase class 3 family protein
Probab=57.91 E-value=24 Score=38.34 Aligned_cols=69 Identities=14% Similarity=0.161 Sum_probs=49.9
Q ss_pred hhhHHHHHHHHHHHHHHCCCC-C--CCCEEEEeccccccccHHHHHHHHHcC-C----CCceeeeeeeEEecccccc
Q 012985 194 NNTAEDSYTFLVNWFERFPQY-K--NRDFFITGESYAGHYVPQLAYTILSKN-T----SKTIINLKGIAIGNAWIDD 262 (452)
Q Consensus 194 ~~~A~d~~~fL~~f~~~fPey-~--~~~~yi~GESYgG~yvP~lA~~I~~~n-~----~~~~inLkGI~IGNg~id~ 262 (452)
..+.+++...++...+.+|.. + ...++|+|||-||-.+-..|..|...+ . ....+++.-+..|.|-+..
T Consensus 268 ~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVGN 344 (527)
T PLN02761 268 FSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVGN 344 (527)
T ss_pred hhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcCC
Confidence 356788899999988888643 2 235999999999999988888887643 1 1234566677777776654
No 131
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=55.47 E-value=23 Score=36.04 Aligned_cols=28 Identities=14% Similarity=0.161 Sum_probs=25.3
Q ss_pred CCeEEEEecCCCcccCchhHHHHHHhCC
Q 012985 396 GIRVWIYSGDTDGRVPVTSSRYSINALN 423 (452)
Q Consensus 396 girVlIYsGD~D~i~p~~Gt~~wi~~L~ 423 (452)
..+|++.+|+.|.++|....+.+.+.+.
T Consensus 286 ~~Pvliv~G~~D~i~~~~~~~~~~~~~~ 313 (350)
T TIGR01836 286 KMPILNIYAERDHLVPPDASKALNDLVS 313 (350)
T ss_pred CCCeEEEecCCCCcCCHHHHHHHHHHcC
Confidence 5899999999999999999998888764
No 132
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=55.38 E-value=23 Score=29.65 Aligned_cols=41 Identities=15% Similarity=0.184 Sum_probs=34.2
Q ss_pred CeEEEEecCCCcccCchhHHHHHHhCCCCCCcceeceEeCCeEEEEEecCccc
Q 012985 397 IRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGWWICARVQGSDI 449 (452)
Q Consensus 397 irVlIYsGD~D~i~p~~Gt~~wi~~L~w~~~~~w~pW~~~g~~~~~~~~g~~~ 449 (452)
.+|||.++..|.+.|+.+.+...+.|.- .+.|...+.||-+
T Consensus 35 ~piL~l~~~~Dp~TP~~~a~~~~~~l~~------------s~lvt~~g~gHg~ 75 (103)
T PF08386_consen 35 PPILVLGGTHDPVTPYEGARAMAARLPG------------SRLVTVDGAGHGV 75 (103)
T ss_pred CCEEEEecCcCCCCcHHHHHHHHHHCCC------------ceEEEEeccCcce
Confidence 8999999999999999999999998753 2566777777654
No 133
>PLN02408 phospholipase A1
Probab=54.77 E-value=31 Score=35.98 Aligned_cols=64 Identities=16% Similarity=0.173 Sum_probs=44.2
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccccc
Q 012985 195 NTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWID 261 (452)
Q Consensus 195 ~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id 261 (452)
...+++.+-++...+.+|.. ...++|+|||-||-.+-..|..|.......+ .++-+..|.|-+.
T Consensus 179 s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~--~V~v~tFGsPRVG 242 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKTTFKRAP--MVTVISFGGPRVG 242 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHHhcCCCC--ceEEEEcCCCCcc
Confidence 45677888888888888865 3469999999999999888888876421111 2344555555544
No 134
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=54.72 E-value=27 Score=35.07 Aligned_cols=35 Identities=14% Similarity=0.380 Sum_probs=28.2
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccc
Q 012985 194 NNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAG 228 (452)
Q Consensus 194 ~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG 228 (452)
.++|+.+++.+.......|+=..-++|++|||-|.
T Consensus 86 ~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa 120 (289)
T PF10081_consen 86 REAARALFEAVYARWSTLPEDRRPKLYLYGESLGA 120 (289)
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccc
Confidence 46778888888888888888655569999999854
No 135
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=54.04 E-value=27 Score=32.56 Aligned_cols=67 Identities=25% Similarity=0.240 Sum_probs=39.2
Q ss_pred ccceeEEEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHC-CCCCCCCEEEEeccccccccHHHHHH
Q 012985 164 NVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERF-PQYKNRDFFITGESYAGHYVPQLAYT 237 (452)
Q Consensus 164 ~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~f-Pey~~~~~yi~GESYgG~yvP~lA~~ 237 (452)
+.|-|.|++-.+..+....--...+ -+..|.+|-.|+...=... | .-.+-++|||||..-+-..+..
T Consensus 62 ~vAvV~WlgYdaP~~~~~~a~~~~~----A~~ga~~L~~f~~gl~a~~~~---~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPDAASPGY----ARAGAPRLARFLDGLRATHGP---DAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred CeEEEEEcCCCCCCCccccccCchH----HHHHHHHHHHHHHHhhhhcCC---CCCEEEEEecchhHHHHHHhhh
Confidence 7888999855444211111111111 1345666666666654444 2 4479999999998877766655
No 136
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=53.89 E-value=1.9e+02 Score=29.87 Aligned_cols=123 Identities=25% Similarity=0.338 Sum_probs=68.0
Q ss_pred ceEEEEEEecCCCCCCCCeEEEECCCCChhhhhh--hhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccc
Q 012985 104 RALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGY--GAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSY 181 (452)
Q Consensus 104 ~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~--g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy 181 (452)
--.+.|... . ....+|+++-++|==|.|.--| |++. .+.+. -..++-.+- -|-|.+-
T Consensus 61 ~~~ldw~~~-p-~~~~~P~vVl~HGL~G~s~s~y~r~L~~------------~~~~r------g~~~Vv~~~-Rgcs~~~ 119 (345)
T COG0429 61 FIDLDWSED-P-RAAKKPLVVLFHGLEGSSNSPYARGLMR------------ALSRR------GWLVVVFHF-RGCSGEA 119 (345)
T ss_pred EEEEeeccC-c-cccCCceEEEEeccCCCCcCHHHHHHHH------------HHHhc------CCeEEEEec-ccccCCc
Confidence 345566432 2 2345599999999555443211 2221 12111 134455553 4555443
Q ss_pred cCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccc
Q 012985 182 SNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAW 259 (452)
Q Consensus 182 ~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~ 259 (452)
.....-|. .++. +|+..||..-..+|| .++||.+|-|.||. +||.++.+.. .....-.++.+-+|+
T Consensus 120 n~~p~~yh-~G~t---~D~~~~l~~l~~~~~---~r~~~avG~SLGgn---mLa~ylgeeg--~d~~~~aa~~vs~P~ 185 (345)
T COG0429 120 NTSPRLYH-SGET---EDIRFFLDWLKARFP---PRPLYAVGFSLGGN---MLANYLGEEG--DDLPLDAAVAVSAPF 185 (345)
T ss_pred ccCcceec-ccch---hHHHHHHHHHHHhCC---CCceEEEEecccHH---HHHHHHHhhc--cCcccceeeeeeCHH
Confidence 32333333 3554 555555554445677 79999999999995 5677777663 223336677776665
No 137
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=53.60 E-value=96 Score=33.56 Aligned_cols=33 Identities=18% Similarity=0.227 Sum_probs=22.4
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEeccccccccHHH
Q 012985 201 YTFLVNWFERFPQYKNRDFFITGESYAGHYVPQL 234 (452)
Q Consensus 201 ~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~l 234 (452)
++.+++.-+.|-.= ..++-|+|||-|++-+-.+
T Consensus 165 LkWV~~NIe~FGGD-p~NVTl~GeSAGa~si~~L 197 (491)
T COG2272 165 LKWVRDNIEAFGGD-PQNVTLFGESAGAASILTL 197 (491)
T ss_pred HHHHHHHHHHhCCC-ccceEEeeccchHHHHHHh
Confidence 35555656677542 3479999999988765444
No 138
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=52.86 E-value=14 Score=35.11 Aligned_cols=59 Identities=24% Similarity=0.313 Sum_probs=44.4
Q ss_pred CCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHc
Q 012985 175 AGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSK 241 (452)
Q Consensus 175 vGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~ 241 (452)
-|||=|-+.-.... ++.+.|....+.++ .++|+-+ .+.+.|-|+|+-.+.++|.+.-+.
T Consensus 69 RgVG~S~G~fD~Gi---GE~~Da~aaldW~~---~~hp~s~--~~~l~GfSFGa~Ia~~la~r~~e~ 127 (210)
T COG2945 69 RGVGRSQGEFDNGI---GELEDAAAALDWLQ---ARHPDSA--SCWLAGFSFGAYIAMQLAMRRPEI 127 (210)
T ss_pred cccccccCcccCCc---chHHHHHHHHHHHH---hhCCCch--hhhhcccchHHHHHHHHHHhcccc
Confidence 69998887655432 67777887777777 4888643 379999999998888888776443
No 139
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=52.62 E-value=43 Score=36.21 Aligned_cols=65 Identities=26% Similarity=0.318 Sum_probs=45.4
Q ss_pred ceeEEEec-------CCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHH
Q 012985 166 ANVLFLET-------PAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLA 235 (452)
Q Consensus 166 anvlfiDq-------PvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA 235 (452)
|.|+.+|. |.+++ |.++ -.+ -+..|+-.|+..|++.--.+|+.-.+.+++.+|-||.|-...=+-
T Consensus 119 A~v~~lEHRFYG~S~P~~~~-st~n--lk~--LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R 190 (514)
T KOG2182|consen 119 ATVFQLEHRFYGQSSPIGDL-STSN--LKY--LSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFR 190 (514)
T ss_pred CeeEEeeeeccccCCCCCCC-cccc--hhh--hhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHH
Confidence 45666764 66665 3332 222 367788899999999888889766666999999999986544333
No 140
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=52.47 E-value=66 Score=31.86 Aligned_cols=89 Identities=17% Similarity=0.303 Sum_probs=55.9
Q ss_pred CeEEEECCCCChhhhhhhhhh-hcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChhhHHH
Q 012985 121 PLVLWLNGGPGCSSLGYGAME-ELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAED 199 (452)
Q Consensus 121 Pl~lWlnGGPGcSS~~~g~~~-E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d 199 (452)
|.+++++++=|.-.. |-.|. +++ +..-++-++.| ||--. .... .+-++.|+.
T Consensus 1 ~pLF~fhp~~G~~~~-~~~L~~~l~-------------------~~~~v~~l~a~---g~~~~--~~~~--~~l~~~a~~ 53 (257)
T COG3319 1 PPLFCFHPAGGSVLA-YAPLAAALG-------------------PLLPVYGLQAP---GYGAG--EQPF--ASLDDMAAA 53 (257)
T ss_pred CCEEEEcCCCCcHHH-HHHHHHHhc-------------------cCceeeccccC---ccccc--cccc--CCHHHHHHH
Confidence 568888876555333 32222 222 23456778877 33211 1112 144555665
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcC
Q 012985 200 SYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKN 242 (452)
Q Consensus 200 ~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n 242 (452)
....|+ +..|+ -|.++.|.|+||.-+=.+|.++..+-
T Consensus 54 yv~~Ir---~~QP~---GPy~L~G~S~GG~vA~evA~qL~~~G 90 (257)
T COG3319 54 YVAAIR---RVQPE---GPYVLLGWSLGGAVAFEVAAQLEAQG 90 (257)
T ss_pred HHHHHH---HhCCC---CCEEEEeeccccHHHHHHHHHHHhCC
Confidence 555555 57784 49999999999999999999998873
No 141
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=52.44 E-value=50 Score=36.96 Aligned_cols=127 Identities=22% Similarity=0.275 Sum_probs=70.9
Q ss_pred ceEEEEEEecCC--CC-CCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccc----------eeEE
Q 012985 104 RALFYYFVESPQ--SS-SSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVA----------NVLF 170 (452)
Q Consensus 104 ~~lFy~f~ea~~--~~-~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~a----------nvlf 170 (452)
.-+.|-.+-... +| +.-|++|.+-||||.- ++.|.+.|.+.. =|++
T Consensus 623 g~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQ---------------------lVnnsfkgi~ylR~~~LaslGy~Vv~ 681 (867)
T KOG2281|consen 623 GLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQ---------------------LVNNSFKGIQYLRFCRLASLGYVVVF 681 (867)
T ss_pred CcEEEEEEEccccCCCCCCCceEEEEcCCCceE---------------------EeeccccceehhhhhhhhhcceEEEE
Confidence 345565554443 22 3479999999999862 455777776542 3689
Q ss_pred EecCCCcc---ccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCC-CCCEEEEeccccccccHHHHHHHHHcCCCCc
Q 012985 171 LETPAGVG---FSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYK-NRDFFITGESYAGHYVPQLAYTILSKNTSKT 246 (452)
Q Consensus 171 iDqPvGvG---fSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~-~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~ 246 (452)
||.- |+- .-+-..-. . +.+.- .++|=.+-||-.-++.- |. -..+-|-|-||||. |+...+.+- +
T Consensus 682 IDnR-GS~hRGlkFE~~ik-~-kmGqV-E~eDQVeglq~Laeq~g-fidmdrV~vhGWSYGGY----LSlm~L~~~---P 749 (867)
T KOG2281|consen 682 IDNR-GSAHRGLKFESHIK-K-KMGQV-EVEDQVEGLQMLAEQTG-FIDMDRVGVHGWSYGGY----LSLMGLAQY---P 749 (867)
T ss_pred EcCC-CccccchhhHHHHh-h-ccCee-eehhhHHHHHHHHHhcC-cccchheeEeccccccH----HHHHHhhcC---c
Confidence 9963 321 11100000 0 11222 24555555654445543 33 34699999999994 444434432 1
Q ss_pred eeeeeeeEEecccccccc
Q 012985 247 IINLKGIAIGNAWIDDNL 264 (452)
Q Consensus 247 ~inLkGI~IGNg~id~~~ 264 (452)
. -+|-.+-|.|+++...
T Consensus 750 ~-IfrvAIAGapVT~W~~ 766 (867)
T KOG2281|consen 750 N-IFRVAIAGAPVTDWRL 766 (867)
T ss_pred c-eeeEEeccCcceeeee
Confidence 2 2666677888888754
No 142
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=51.81 E-value=43 Score=33.14 Aligned_cols=111 Identities=21% Similarity=0.269 Sum_probs=69.7
Q ss_pred CCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChhh
Q 012985 117 SSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNT 196 (452)
Q Consensus 117 ~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~ 196 (452)
....+.+|+.+|= +.- .|.+.|+ ..+.+=.=..|+.=.|- -|-|.|-++.+. .+....
T Consensus 57 ~~~~~~lly~hGN---a~D-lgq~~~~-------------~~~l~~~ln~nv~~~DY-SGyG~S~G~psE----~n~y~D 114 (258)
T KOG1552|consen 57 EAAHPTLLYSHGN---AAD-LGQMVEL-------------FKELSIFLNCNVVSYDY-SGYGRSSGKPSE----RNLYAD 114 (258)
T ss_pred cccceEEEEcCCc---ccc-hHHHHHH-------------HHHHhhcccceEEEEec-ccccccCCCccc----ccchhh
Confidence 3346999999875 222 3433331 11122223467888886 688888776543 255566
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccccccc
Q 012985 197 AEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNL 264 (452)
Q Consensus 197 A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~~~ 264 (452)
.+..+++|++ ++- +..++.++|.|-|..-.-.+|. + .+ +.|+++-+|+++-..
T Consensus 115 i~avye~Lr~---~~g--~~~~Iil~G~SiGt~~tv~Las----r----~~--~~alVL~SPf~S~~r 167 (258)
T KOG1552|consen 115 IKAVYEWLRN---RYG--SPERIILYGQSIGTVPTVDLAS----R----YP--LAAVVLHSPFTSGMR 167 (258)
T ss_pred HHHHHHHHHh---hcC--CCceEEEEEecCCchhhhhHhh----c----CC--cceEEEeccchhhhh
Confidence 7778888874 442 5789999999998654223332 1 12 999999999988543
No 143
>PLN02802 triacylglycerol lipase
Probab=50.78 E-value=32 Score=37.28 Aligned_cols=65 Identities=11% Similarity=0.123 Sum_probs=45.1
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccccc
Q 012985 195 NTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (452)
Q Consensus 195 ~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~ 262 (452)
.+.+++..-++.+++++|.. ...++|+|||-||-..-..|..|...... .+++.-+..|.|-+..
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e-~~sI~VTGHSLGGALAtLaA~dL~~~~~~--~~pV~vyTFGsPRVGN 373 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGE-ELSITVTGHSLGAALALLVADELATCVPA--APPVAVFSFGGPRVGN 373 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCC-cceEEEeccchHHHHHHHHHHHHHHhCCC--CCceEEEEcCCCCccc
Confidence 45678888888888877643 24799999999999998888888665311 1234455556555543
No 144
>PLN02847 triacylglycerol lipase
Probab=50.71 E-value=27 Score=38.65 Aligned_cols=62 Identities=15% Similarity=0.250 Sum_probs=39.6
Q ss_pred CCCChhhHHHHHHHH----HHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEec
Q 012985 190 NPGDNNTAEDSYTFL----VNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGN 257 (452)
Q Consensus 190 ~~~~~~~A~d~~~fL----~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGN 257 (452)
+.+--..|+.+...+ ++-++.+|.| ++.|+|||.||-.+.-++..+.++. ..-+++.+..|-
T Consensus 223 H~Gml~AArwI~~~i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLRe~~---~fssi~CyAFgP 288 (633)
T PLN02847 223 HCGMVAAARWIAKLSTPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILREQK---EFSSTTCVTFAP 288 (633)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHhcCC---CCCCceEEEecC
Confidence 345555666655544 4445567754 6999999999998888866554332 123456666664
No 145
>PLN02324 triacylglycerol lipase
Probab=50.61 E-value=38 Score=35.86 Aligned_cols=68 Identities=18% Similarity=0.174 Sum_probs=47.2
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCC-------CCceeeeeeeEEecccccc
Q 012985 194 NNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNT-------SKTIINLKGIAIGNAWIDD 262 (452)
Q Consensus 194 ~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~-------~~~~inLkGI~IGNg~id~ 262 (452)
..+-+++..-|+..++.+|... ..++|+|||-||-.+-..|..|.+... ....+++.-+..|.|-+..
T Consensus 193 ~SareqVl~eV~~L~~~Yp~e~-~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGsPRVGN 267 (415)
T PLN02324 193 TSAQEQVQGELKRLLELYKNEE-ISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGSPRIGD 267 (415)
T ss_pred hHHHHHHHHHHHHHHHHCCCCC-ceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecCCCcCC
Confidence 3566788888888888887532 479999999999999888888876421 0123445555566665543
No 146
>TIGR01911 HesB_rel_seleno HesB-like selenoprotein. This model represents a family of small proteins related to HesB and its close homologs, which are likely to be invovlved in iron-sulfur cluster assembly (See TIGR00049 and pfam01521). Several members are selenoproteins, with a TGA codon and Sec residue that aligns to the conserved Cys of the HesB domain. A variable Cys/Ser/Gly-rich C-terminal region is not included in the seed alignment and model.
Probab=50.46 E-value=14 Score=30.65 Aligned_cols=58 Identities=17% Similarity=0.257 Sum_probs=33.5
Q ss_pred eEEEECCCCChhhhhhhhhhhc---CCeeEcCCCCccccCCCCcccc--ceeEEEecCCCcccc
Q 012985 122 LVLWLNGGPGCSSLGYGAMEEL---GPFRVNSDGKTLYRNEYAWNNV--ANVLFLETPAGVGFS 180 (452)
Q Consensus 122 l~lWlnGGPGcSS~~~g~~~E~---GP~~v~~~~~~l~~N~~sW~~~--anvlfiDqPvGvGfS 180 (452)
|=|.+.|| |||++.|+.=.+. +-..+..+|-++.-.+.|-.-. +-|=|+|...|.||-
T Consensus 28 LRi~v~~g-GCsG~~Y~~~ld~~~~~D~v~~~~gv~v~vD~~s~~~l~G~~iDy~~~~~g~gF~ 90 (92)
T TIGR01911 28 IRIHFAGM-GCMGPMFNLIADEEKEGDEIEKIHDLTFLIDKNLIDQFGGFSIECAEENFGAGFS 90 (92)
T ss_pred EEEEEeCC-CccCcccceEecCCCCCCEEEEeCCEEEEECHHHHHHhCCCEEEEecCCCCCcEE
Confidence 88889998 9999876544322 2223333444444444443333 346677777776663
No 147
>PLN02934 triacylglycerol lipase
Probab=49.43 E-value=40 Score=36.65 Aligned_cols=41 Identities=15% Similarity=0.220 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHc
Q 012985 198 EDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSK 241 (452)
Q Consensus 198 ~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~ 241 (452)
..+..-|+.+++.+|. .+++|+|||-||-.+-..|..+..+
T Consensus 305 ~~v~~~lk~ll~~~p~---~kIvVTGHSLGGALAtLaA~~L~l~ 345 (515)
T PLN02934 305 YAVRSKLKSLLKEHKN---AKFVVTGHSLGGALAILFPTVLVLQ 345 (515)
T ss_pred HHHHHHHHHHHHHCCC---CeEEEeccccHHHHHHHHHHHHHHh
Confidence 4566778888888875 4699999999999888777666543
No 148
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=48.88 E-value=35 Score=35.00 Aligned_cols=61 Identities=21% Similarity=0.312 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccccc
Q 012985 198 EDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (452)
Q Consensus 198 ~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~ 262 (452)
..+.+-++...+++| +..++++|||-||-.+...|..|..... ....+++=+-.|-|-+.+
T Consensus 155 ~~~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~~-~~~~~v~v~tFG~PRvGn 215 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNGL-KTSSPVKVYTFGQPRVGN 215 (336)
T ss_pred HHHHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcCC-CCCCceEEEEecCCCccc
Confidence 344444555556777 5689999999999999999999988751 123455556666655443
No 149
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=47.96 E-value=36 Score=32.87 Aligned_cols=39 Identities=18% Similarity=0.376 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHH
Q 012985 198 EDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILS 240 (452)
Q Consensus 198 ~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~ 240 (452)
+...+++++..+.+|+ +++|+|||=||..+-+.|..+.+
T Consensus 69 ~~A~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~ 107 (224)
T PF11187_consen 69 KSALAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDD 107 (224)
T ss_pred HHHHHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccH
Confidence 4556777777777763 59999999999988888877543
No 150
>PHA02857 monoglyceride lipase; Provisional
Probab=47.49 E-value=37 Score=32.62 Aligned_cols=47 Identities=13% Similarity=0.104 Sum_probs=35.6
Q ss_pred HcCCeEEEEecCCCcccCchhHHHHHHhCCCCCCcceeceEeCCeEEEEEecCccccC
Q 012985 394 ASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGWWICARVQGSDIHH 451 (452)
Q Consensus 394 ~~girVlIYsGD~D~i~p~~Gt~~wi~~L~w~~~~~w~pW~~~g~~~~~~~~g~~~~~ 451 (452)
+-.++|||..|+.|.+||....+.+.+++.- +.....+.+.||+++.
T Consensus 207 ~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~-----------~~~~~~~~~~gH~~~~ 253 (276)
T PHA02857 207 KIKTPILILQGTNNEISDVSGAYYFMQHANC-----------NREIKIYEGAKHHLHK 253 (276)
T ss_pred cCCCCEEEEecCCCCcCChHHHHHHHHHccC-----------CceEEEeCCCcccccC
Confidence 3468999999999999999999998887532 1244555667787763
No 151
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=46.49 E-value=45 Score=31.87 Aligned_cols=46 Identities=13% Similarity=0.031 Sum_probs=34.9
Q ss_pred HcCCeEEEEecCCCcccCchhHHHHHHhCCCCCCcceeceEeCCeEEEEEecCccccC
Q 012985 394 ASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGWWICARVQGSDIHH 451 (452)
Q Consensus 394 ~~girVlIYsGD~D~i~p~~Gt~~wi~~L~w~~~~~w~pW~~~g~~~~~~~~g~~~~~ 451 (452)
+-.++|++..|..|.++|..-.+.+.+.+. +.+.+.+.++||+++.
T Consensus 221 ~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~------------~~~~~~i~~agH~~~~ 266 (282)
T TIGR03343 221 EIKAKTLVTWGRDDRFVPLDHGLKLLWNMP------------DAQLHVFSRCGHWAQW 266 (282)
T ss_pred hCCCCEEEEEccCCCcCCchhHHHHHHhCC------------CCEEEEeCCCCcCCcc
Confidence 346899999999999999877776666542 4556677788998763
No 152
>PLN00413 triacylglycerol lipase
Probab=46.10 E-value=24 Score=37.96 Aligned_cols=40 Identities=18% Similarity=0.370 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHc
Q 012985 199 DSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSK 241 (452)
Q Consensus 199 d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~ 241 (452)
.+..-|++.++.+|+ .+++|+|||-||..+-..|..+..+
T Consensus 269 ~i~~~Lk~ll~~~p~---~kliVTGHSLGGALAtLaA~~L~~~ 308 (479)
T PLN00413 269 TILRHLKEIFDQNPT---SKFILSGHSLGGALAILFTAVLIMH 308 (479)
T ss_pred HHHHHHHHHHHHCCC---CeEEEEecCHHHHHHHHHHHHHHhc
Confidence 566777777787774 4699999999999988888766543
No 153
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=45.96 E-value=30 Score=32.94 Aligned_cols=49 Identities=14% Similarity=0.112 Sum_probs=36.6
Q ss_pred CChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHc
Q 012985 192 GDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSK 241 (452)
Q Consensus 192 ~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~ 241 (452)
+-+..|+.+.+.|.+..+..+.- .+++.++|+|.||.++=.+...+.+.
T Consensus 54 gI~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~ 102 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDK 102 (217)
T ss_pred hhHHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhc
Confidence 44567788888888777766543 47999999999999987666666554
No 154
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=45.92 E-value=1.1e+02 Score=24.31 Aligned_cols=79 Identities=23% Similarity=0.283 Sum_probs=49.7
Q ss_pred CceEEEEEEecCCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCcccccc
Q 012985 103 GRALFYYFVESPQSSSSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYS 182 (452)
Q Consensus 103 ~~~lFy~f~ea~~~~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~ 182 (452)
|.+||+..++.+.. .+.+|+.++|--..|.- |..+.+ + |.. +-.+|.-.|. .|-|.|-+
T Consensus 1 G~~L~~~~w~p~~~--~k~~v~i~HG~~eh~~r-y~~~a~---~--------L~~------~G~~V~~~D~-rGhG~S~g 59 (79)
T PF12146_consen 1 GTKLFYRRWKPENP--PKAVVVIVHGFGEHSGR-YAHLAE---F--------LAE------QGYAVFAYDH-RGHGRSEG 59 (79)
T ss_pred CcEEEEEEecCCCC--CCEEEEEeCCcHHHHHH-HHHHHH---H--------HHh------CCCEEEEECC-CcCCCCCC
Confidence 35688877766433 78999999996444443 544442 1 211 3357889997 58888865
Q ss_pred CCCCCCCCCCChhhHHHHHHHHH
Q 012985 183 NTSSDYSNPGDNNTAEDSYTFLV 205 (452)
Q Consensus 183 ~~~~~~~~~~~~~~A~d~~~fL~ 205 (452)
... +. .+-++..+|+..|++
T Consensus 60 ~rg--~~-~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 60 KRG--HI-DSFDDYVDDLHQFIQ 79 (79)
T ss_pred ccc--cc-CCHHHHHHHHHHHhC
Confidence 332 22 255677788877764
No 155
>COG0400 Predicted esterase [General function prediction only]
Probab=44.77 E-value=18 Score=34.61 Aligned_cols=45 Identities=18% Similarity=0.232 Sum_probs=37.7
Q ss_pred cCCeEEEEecCCCcccCchhHHHHHHhCCCCCCcceeceEeCCeE
Q 012985 395 SGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGWW 439 (452)
Q Consensus 395 ~girVlIYsGD~D~i~p~~Gt~~wi~~L~w~~~~~w~pW~~~g~~ 439 (452)
++.+|++.+|..|.|||..-+++..+.|.=.+.+-+.-|+..|+.
T Consensus 145 ~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~~GH~ 189 (207)
T COG0400 145 AGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHEGGHE 189 (207)
T ss_pred CCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEecCCCc
Confidence 579999999999999999999999888876777777777666653
No 156
>PLN02310 triacylglycerol lipase
Probab=44.44 E-value=46 Score=35.17 Aligned_cols=64 Identities=14% Similarity=0.154 Sum_probs=42.8
Q ss_pred hhHHHHHHHHHHHHHHCCC-CCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccccc
Q 012985 195 NTAEDSYTFLVNWFERFPQ-YKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWID 261 (452)
Q Consensus 195 ~~A~d~~~fL~~f~~~fPe-y~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id 261 (452)
.+.+++..-++...+.+++ -....+.|+|||-||-.+-..|..|.... +.+++.-+..|.|-+.
T Consensus 186 sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~---~~~~v~vyTFGsPRVG 250 (405)
T PLN02310 186 SASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTI---PDLFVSVISFGAPRVG 250 (405)
T ss_pred hHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhC---cCcceeEEEecCCCcc
Confidence 3556677777777776653 22347999999999999877777765432 2344555666666654
No 157
>COG4425 Predicted membrane protein [Function unknown]
Probab=43.99 E-value=49 Score=35.43 Aligned_cols=35 Identities=14% Similarity=0.458 Sum_probs=30.3
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccc
Q 012985 194 NNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAG 228 (452)
Q Consensus 194 ~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG 228 (452)
.++|+.+++..-....+.|+=..-++|+.|||-|.
T Consensus 374 ~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa 408 (588)
T COG4425 374 ADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGA 408 (588)
T ss_pred hhHHHHHHHHHHHHHHhCCcCCCCceEEecccccc
Confidence 46899999999999999998776689999999864
No 158
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=43.33 E-value=13 Score=35.00 Aligned_cols=16 Identities=38% Similarity=0.897 Sum_probs=13.8
Q ss_pred CCCCeEEEECCCCChh
Q 012985 118 SSKPLVLWLNGGPGCS 133 (452)
Q Consensus 118 ~~~Pl~lWlnGGPGcS 133 (452)
.++|-|+|+-|||||-
T Consensus 5 ~~~~~IifVlGGPGsg 20 (195)
T KOG3079|consen 5 LDKPPIIFVLGGPGSG 20 (195)
T ss_pred ccCCCEEEEEcCCCCC
Confidence 4679999999999983
No 159
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=42.94 E-value=1.4e+02 Score=29.63 Aligned_cols=66 Identities=14% Similarity=0.177 Sum_probs=37.9
Q ss_pred CChhhHHHHHHHHHHHHH-HCCCC---CCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccc
Q 012985 192 GDNNTAEDSYTFLVNWFE-RFPQY---KNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWI 260 (452)
Q Consensus 192 ~~~~~A~d~~~fL~~f~~-~fPey---~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~i 260 (452)
.+.+.++.+..+|.+=++ ..|.. .-.++.|+|||=||+-+-.++... . .....+++++++..+|+=
T Consensus 62 ~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~--~-~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 62 DEVASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGN--A-SSSLDLRFSALILLDPVD 131 (259)
T ss_pred hhHHHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhh--c-ccccccceeEEEEecccc
Confidence 344556666666554222 22311 112599999999999544443322 1 123357899999877664
No 160
>PLN02561 triosephosphate isomerase
Probab=42.90 E-value=50 Score=32.65 Aligned_cols=60 Identities=15% Similarity=0.252 Sum_probs=47.0
Q ss_pred hhhHHHHHHHHHHHHHH-CCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccccc
Q 012985 194 NNTAEDSYTFLVNWFER-FPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (452)
Q Consensus 194 ~~~A~d~~~fL~~f~~~-fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~ 262 (452)
.+.++++..|++.++.+ |......++-|. |||-.-|.-+..|... .++.|++||.+-+|+
T Consensus 179 ~~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~------~~iDG~LVG~ASL~~ 239 (253)
T PLN02561 179 PAQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQ------PDVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcC------CCCCeEEEehHhhHH
Confidence 46789999999998864 533333445555 9999999999998765 368999999999996
No 161
>PRK09504 sufA iron-sulfur cluster assembly scaffold protein; Provisional
Probab=42.62 E-value=21 Score=31.05 Aligned_cols=65 Identities=22% Similarity=0.282 Sum_probs=42.4
Q ss_pred CCCeEEEECCCCChhhhhhhhh--hhcCCe--eEcCCCCccccCCCC--ccccceeEEEecCCCccccccCC
Q 012985 119 SKPLVLWLNGGPGCSSLGYGAM--EELGPF--RVNSDGKTLYRNEYA--WNNVANVLFLETPAGVGFSYSNT 184 (452)
Q Consensus 119 ~~Pl~lWlnGGPGcSS~~~g~~--~E~GP~--~v~~~~~~l~~N~~s--W~~~anvlfiDqPvGvGfSy~~~ 184 (452)
...|=|-+.|| |||++.|++- .|.+|- .+..+|-++...+.+ +-+-+-|=|+|.+.|.||-+.|.
T Consensus 38 ~~~LRi~v~~g-GCsG~~Y~~~l~~e~~~~D~v~e~~g~~v~Id~~s~~~L~g~~IDy~~~~~~~gF~f~NP 108 (122)
T PRK09504 38 MKGVRLGVKQT-GCAGFGYVLDSVSEPDKDDLVFEHDGAKLFVPLQAMPFIDGTEVDYVREGLNQIFKFHNP 108 (122)
T ss_pred CceEEEEEECC-CCCceEEEeeecCCCCCCCEEEEeCCEEEEEcHHHHHhhCCcEEEeecCCCcceEEEECC
Confidence 34577777776 9998877542 444443 334445444444433 55667888999999999988664
No 162
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=42.20 E-value=35 Score=34.04 Aligned_cols=30 Identities=17% Similarity=0.087 Sum_probs=26.6
Q ss_pred cCCeEEEEecCCCcccCchhHHHHHHhCCC
Q 012985 395 SGIRVWIYSGDTDGRVPVTSSRYSINALNL 424 (452)
Q Consensus 395 ~girVlIYsGD~D~i~p~~Gt~~wi~~L~w 424 (452)
-.++|||.+|+.|.+||....+.+.+++..
T Consensus 250 i~~PvLii~G~~D~ivp~~~~~~l~~~i~~ 279 (330)
T PLN02298 250 VSIPFIVLHGSADVVTDPDVSRALYEEAKS 279 (330)
T ss_pred cCCCEEEEecCCCCCCCHHHHHHHHHHhcc
Confidence 358999999999999999999998888754
No 163
>PRK11190 Fe/S biogenesis protein NfuA; Provisional
Probab=41.90 E-value=62 Score=30.58 Aligned_cols=64 Identities=14% Similarity=0.249 Sum_probs=42.3
Q ss_pred CeEEEECCCCChhhhhhhhhh----hc--CCeeEcCCCCccccCCCC--ccccceeEEEecCCCccccccCCC
Q 012985 121 PLVLWLNGGPGCSSLGYGAME----EL--GPFRVNSDGKTLYRNEYA--WNNVANVLFLETPAGVGFSYSNTS 185 (452)
Q Consensus 121 Pl~lWlnGGPGcSS~~~g~~~----E~--GP~~v~~~~~~l~~N~~s--W~~~anvlfiDqPvGvGfSy~~~~ 185 (452)
.|=|.+.|| |||++.|+.-. |. +=..+..+|-++.-.+.| +.+-+-|=|+|...|.||.+.|..
T Consensus 24 ~LRI~V~~g-GCsG~~Y~~~~~~~~~~~~~D~v~e~~gv~v~Vd~~S~~~L~G~~IDyve~~~g~gF~f~NPN 95 (192)
T PRK11190 24 QIRVFVINP-GTPNAECGVSYCPPDAVEATDTELKFDGFSAYVDELSAPFLEDAEIDFVTDQLGSQLTLKAPN 95 (192)
T ss_pred eEEEEEECC-CcCCceeeeEEeecCCCCCCCEEEEeCCEEEEECcchHhHhCCCEEEEeecCCCCceEEECCC
Confidence 355556675 99987655433 11 224445555556556655 567788999999999999997654
No 164
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=41.86 E-value=26 Score=29.74 Aligned_cols=33 Identities=30% Similarity=0.328 Sum_probs=27.5
Q ss_pred HHHHcCCeEEEEecCCCcccCchhHHHHHHhCC
Q 012985 391 QLIASGIRVWIYSGDTDGRVPVTSSRYSINALN 423 (452)
Q Consensus 391 ~LL~~girVlIYsGD~D~i~p~~Gt~~wi~~L~ 423 (452)
.+-...++|++..|+.|.++|....+...++++
T Consensus 99 ~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~ 131 (145)
T PF12695_consen 99 DLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP 131 (145)
T ss_dssp HHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC
T ss_pred hhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC
Confidence 344566899999999999999999999888887
No 165
>PLN02429 triosephosphate isomerase
Probab=41.70 E-value=50 Score=33.73 Aligned_cols=61 Identities=13% Similarity=0.270 Sum_probs=47.0
Q ss_pred hhhHHHHHHHHHHHHHH-CCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccccccc
Q 012985 194 NNTAEDSYTFLVNWFER-FPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDN 263 (452)
Q Consensus 194 ~~~A~d~~~fL~~f~~~-fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~~ 263 (452)
.+.++.+..|+++|+.. +.+-....+-|. |||-.-|.-+..|..+. ++.|++||.+.+++.
T Consensus 238 ~e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~~------diDG~LVGgASL~~~ 299 (315)
T PLN02429 238 PQQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKEE------DIDGFLVGGASLKGP 299 (315)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcCC------CCCEEEeecceecHH
Confidence 46789999999999874 433222344555 99999999999987653 689999999998763
No 166
>PLN02162 triacylglycerol lipase
Probab=41.34 E-value=38 Score=36.41 Aligned_cols=41 Identities=15% Similarity=0.194 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHc
Q 012985 198 EDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSK 241 (452)
Q Consensus 198 ~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~ 241 (452)
..+.+-|+..+.++|. .+++|+|||-||-.+--.|..+..+
T Consensus 262 ~~I~~~L~~lL~k~p~---~kliVTGHSLGGALAtLaAa~L~~~ 302 (475)
T PLN02162 262 YTIRQMLRDKLARNKN---LKYILTGHSLGGALAALFPAILAIH 302 (475)
T ss_pred HHHHHHHHHHHHhCCC---ceEEEEecChHHHHHHHHHHHHHHc
Confidence 3455666777777774 5699999999999887777665543
No 167
>PLN03037 lipase class 3 family protein; Provisional
Probab=40.46 E-value=59 Score=35.45 Aligned_cols=64 Identities=19% Similarity=0.238 Sum_probs=41.2
Q ss_pred hHHHHHHHHHHHHHHCCCC-CCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccccc
Q 012985 196 TAEDSYTFLVNWFERFPQY-KNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWID 261 (452)
Q Consensus 196 ~A~d~~~fL~~f~~~fPey-~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id 261 (452)
+-+++..-++...+.+|+. ....++|+|||-||-.+--.|..|...... ..++.-+..|.|-+.
T Consensus 296 areQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~p~--~~~VtvyTFGsPRVG 360 (525)
T PLN03037 296 ASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSVPA--LSNISVISFGAPRVG 360 (525)
T ss_pred hHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhCCC--CCCeeEEEecCCCcc
Confidence 3456777777777777653 345799999999999987777777664311 113344445555443
No 168
>PRK07868 acyl-CoA synthetase; Validated
Probab=39.64 E-value=69 Score=37.74 Aligned_cols=40 Identities=25% Similarity=0.233 Sum_probs=27.5
Q ss_pred CCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccccc
Q 012985 216 NRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (452)
Q Consensus 216 ~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~ 262 (452)
..+++++|+|.||..+-.+|..-.. -.++++++-+.-+|.
T Consensus 140 ~~~v~lvG~s~GG~~a~~~aa~~~~-------~~v~~lvl~~~~~d~ 179 (994)
T PRK07868 140 GRDVHLVGYSQGGMFCYQAAAYRRS-------KDIASIVTFGSPVDT 179 (994)
T ss_pred CCceEEEEEChhHHHHHHHHHhcCC-------CccceEEEEeccccc
Confidence 4589999999999998777753111 136777666665553
No 169
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=39.39 E-value=26 Score=33.13 Aligned_cols=127 Identities=16% Similarity=0.182 Sum_probs=55.4
Q ss_pred CCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccc-cceeEEEecCCCc----ccccc---------CC
Q 012985 119 SKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNN-VANVLFLETPAGV----GFSYS---------NT 184 (452)
Q Consensus 119 ~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~-~anvlfiDqPvGv----GfSy~---------~~ 184 (452)
.+|=||.|+|. |.|+-.+ -..+++++ ....+ .+..+|+|-|.-+ |.... ..
T Consensus 3 ~k~riLcLHG~-~~na~if--~~q~~~l~------------~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~ 67 (212)
T PF03959_consen 3 RKPRILCLHGY-GQNAEIF--RQQTSALR------------KALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDP 67 (212)
T ss_dssp ---EEEEE--T-T--HHHH--HHHTHHHH------------HHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHT
T ss_pred CCceEEEeCCC-CcCHHHH--HHHHHHHH------------HHHhhCcEEEEEecCCcccCCcccccccccccccccCCC
Confidence 57889999997 6666521 22223332 11223 6788888887655 22211 11
Q ss_pred CCC--CCCC----CChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecc
Q 012985 185 SSD--YSNP----GDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNA 258 (452)
Q Consensus 185 ~~~--~~~~----~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg 258 (452)
... +... ......++.++.|.++++...-| .=|.|-|=|+..+..|+....+........+||-+++-+|
T Consensus 68 ~~~~~W~~~~~~~~~~~~~~~sl~~l~~~i~~~GPf----dGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg 143 (212)
T PF03959_consen 68 GPFYSWWDPDDDDHEYEGLDESLDYLRDYIEENGPF----DGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISG 143 (212)
T ss_dssp T--EESS---S-SGGG---HHHHHHHHHHHHHH-------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES-
T ss_pred CcceeeeecCCCcccccCHHHHHHHHHHHHHhcCCe----EEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcc
Confidence 100 0000 11234456666777777654322 3499999999999888877665531113567788777777
Q ss_pred cccccc
Q 012985 259 WIDDNL 264 (452)
Q Consensus 259 ~id~~~ 264 (452)
+.-+..
T Consensus 144 ~~p~~~ 149 (212)
T PF03959_consen 144 FPPPDP 149 (212)
T ss_dssp ---EEE
T ss_pred cCCCch
Confidence 765543
No 170
>COG0627 Predicted esterase [General function prediction only]
Probab=39.09 E-value=1.2e+02 Score=31.05 Aligned_cols=129 Identities=20% Similarity=0.215 Sum_probs=65.0
Q ss_pred CCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCc--cccC-CCCccccceeEEEecCCCccccccCC-CCCCCCCCCh
Q 012985 119 SKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKT--LYRN-EYAWNNVANVLFLETPAGVGFSYSNT-SSDYSNPGDN 194 (452)
Q Consensus 119 ~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~--l~~N-~~sW~~~anvlfiDqPvGvGfSy~~~-~~~~~~~~~~ 194 (452)
.+--|+|+.+|..|..- ++.+.++++-..+... +.-+ -.-+....++--|+ |+|.|.|+=.+ ..... ...
T Consensus 52 ~~ipV~~~l~G~t~~~~---~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~~--~~~ 125 (316)
T COG0627 52 RDIPVLYLLSGLTCNEP---NVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPPW--ASG 125 (316)
T ss_pred CCCCEEEEeCCCCCCCC---ceEeccchhhhhhhcCeEEecCCCCcccCCCCccccc-cCCCccceecccccCcc--ccC
Confidence 33334455556888731 2233444432222111 1111 12233444444455 79999887322 21111 111
Q ss_pred hhHHHHHHHHH-----HHHHHCCCCCC-CCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccccccc
Q 012985 195 NTAEDSYTFLV-----NWFERFPQYKN-RDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDN 263 (452)
Q Consensus 195 ~~A~d~~~fL~-----~f~~~fPey~~-~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~~ 263 (452)
..+.+.||. .|.+.||--++ ..-.|+|+|.||+=+=.+|.+-.++ ++.+.==.|+++|.
T Consensus 126 --~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~--------f~~~sS~Sg~~~~s 190 (316)
T COG0627 126 --PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDR--------FKSASSFSGILSPS 190 (316)
T ss_pred --ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcch--------hceecccccccccc
Confidence 244555554 45566773332 3688999999999888877654332 44454445555554
No 171
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=39.06 E-value=60 Score=33.72 Aligned_cols=106 Identities=25% Similarity=0.430 Sum_probs=63.7
Q ss_pred CCCCeEEEECCCCChhhhhhhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChhhH
Q 012985 118 SSKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNTA 197 (452)
Q Consensus 118 ~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A 197 (452)
.-+-|||...|--| |.|+|=.. ....+.+---.|| .| ||.-|+ ...++. ++..++
T Consensus 241 ngq~LvIC~EGNAG--------FYEvG~m~---tP~~lgYsvLGwN---------hP---GFagST-G~P~p~-n~~nA~ 295 (517)
T KOG1553|consen 241 NGQDLVICFEGNAG--------FYEVGVMN---TPAQLGYSVLGWN---------HP---GFAGST-GLPYPV-NTLNAA 295 (517)
T ss_pred CCceEEEEecCCcc--------ceEeeeec---ChHHhCceeeccC---------CC---CccccC-CCCCcc-cchHHH
Confidence 34678888777543 44555321 1111222233454 36 666553 333553 666677
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccccc
Q 012985 198 EDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (452)
Q Consensus 198 ~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~ 262 (452)
+.+.+|-.+=+ .|+..++.|.|.|-||.-+..+|.- .-+.|++++ ++-.|+
T Consensus 296 DaVvQfAI~~L----gf~~edIilygWSIGGF~~~waAs~---------YPdVkavvL-DAtFDD 346 (517)
T KOG1553|consen 296 DAVVQFAIQVL----GFRQEDIILYGWSIGGFPVAWAASN---------YPDVKAVVL-DATFDD 346 (517)
T ss_pred HHHHHHHHHHc----CCCccceEEEEeecCCchHHHHhhc---------CCCceEEEe-ecchhh
Confidence 77777666533 4557899999999999988777742 557888866 444444
No 172
>PRK09502 iscA iron-sulfur cluster assembly protein; Provisional
Probab=38.89 E-value=28 Score=29.42 Aligned_cols=64 Identities=20% Similarity=0.359 Sum_probs=40.5
Q ss_pred CCeEEEECCCCChhhhhhhhh--hhcCC--eeEcCCCCccccCC--CCccccceeEEEecCCCccccccCC
Q 012985 120 KPLVLWLNGGPGCSSLGYGAM--EELGP--FRVNSDGKTLYRNE--YAWNNVANVLFLETPAGVGFSYSNT 184 (452)
Q Consensus 120 ~Pl~lWlnGGPGcSS~~~g~~--~E~GP--~~v~~~~~~l~~N~--~sW~~~anvlfiDqPvGvGfSy~~~ 184 (452)
..|=|.+.+| |||++.|..- .|..+ ..+..++-++...+ ..+-+-+-|=|+|.+.|.||...+.
T Consensus 24 ~~LRi~v~~~-GCsG~~Y~l~~~~~~~~~D~~~~~~g~~v~id~~s~~~l~g~~IDy~~~~~~~~F~f~NP 93 (107)
T PRK09502 24 FGLRLGVRTS-GCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNP 93 (107)
T ss_pred ceEEEEEECC-CcCCeeeEeeecCCCCCCCEEEEcCCeEEEEeHHHHhHhCCCEEEEeeCCCCceEEEECC
Confidence 3466666664 9998755542 34433 23344444443333 3466777899999999999998654
No 173
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=38.65 E-value=49 Score=30.49 Aligned_cols=42 Identities=21% Similarity=0.080 Sum_probs=31.0
Q ss_pred CCeEEEEecCCCcccCchhHHHHHHhCCCCCCcceeceEeCCeEEEEEecCccc
Q 012985 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGWWICARVQGSDI 449 (452)
Q Consensus 396 girVlIYsGD~D~i~p~~Gt~~wi~~L~w~~~~~w~pW~~~g~~~~~~~~g~~~ 449 (452)
.++|+|.+|+.|.+||....+.+.+.+. +...+.+.+.||+.
T Consensus 198 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~------------~~~~~~~~~~gH~~ 239 (257)
T TIGR03611 198 QHPVLLIANRDDMLVPYTQSLRLAAALP------------NAQLKLLPYGGHAS 239 (257)
T ss_pred CccEEEEecCcCcccCHHHHHHHHHhcC------------CceEEEECCCCCCc
Confidence 5899999999999999988887776643 12334455677764
No 174
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=38.12 E-value=63 Score=29.27 Aligned_cols=44 Identities=14% Similarity=0.015 Sum_probs=32.1
Q ss_pred cCCeEEEEecCCCcccCchhHHHHHHhCCCCCCcceeceEeCCeEEEEEecCcccc
Q 012985 395 SGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGWWICARVQGSDIH 450 (452)
Q Consensus 395 ~girVlIYsGD~D~i~p~~Gt~~wi~~L~w~~~~~w~pW~~~g~~~~~~~~g~~~~ 450 (452)
-..+|+|.+|..|.++|....+.+.+.+. +.+.+.+-+.||+.+
T Consensus 187 i~~Pvlii~g~~D~~~~~~~~~~~~~~~~------------~~~~~~~~~~gH~~~ 230 (245)
T TIGR01738 187 ISVPFLRLYGYLDGLVPAKVVPYLDKLAP------------HSELYIFAKAAHAPF 230 (245)
T ss_pred CCCCEEEEeecCCcccCHHHHHHHHHhCC------------CCeEEEeCCCCCCcc
Confidence 35899999999999999888776655542 234455557788765
No 175
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=38.08 E-value=68 Score=31.62 Aligned_cols=124 Identities=15% Similarity=0.093 Sum_probs=69.9
Q ss_pred cceeEEEecCCCccccccCCCCCCCCCCChh-hHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCC
Q 012985 165 VANVLFLETPAGVGFSYSNTSSDYSNPGDNN-TAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNT 243 (452)
Q Consensus 165 ~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~-~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~ 243 (452)
=+.||-.|- -|+|=|.....+.... .-.+ +-.|+-..|..-=++-| ..|.|.+||||||+-.--+++.= +.+.
T Consensus 57 Gf~Vlt~dy-RG~g~S~p~~~~~~~~-~~~DwA~~D~~aal~~~~~~~~---~~P~y~vgHS~GGqa~gL~~~~~-k~~a 130 (281)
T COG4757 57 GFEVLTFDY-RGIGQSRPASLSGSQW-RYLDWARLDFPAALAALKKALP---GHPLYFVGHSFGGQALGLLGQHP-KYAA 130 (281)
T ss_pred CceEEEEec-ccccCCCccccccCcc-chhhhhhcchHHHHHHHHhhCC---CCceEEeeccccceeecccccCc-ccce
Confidence 357888885 6888776544332211 2222 33455444443333344 68999999999999876665543 2220
Q ss_pred ----C---------CceeeeeeeEEecccccccccccchh-hhhhccC-CCCHHHHHHHHHhhhhc
Q 012985 244 ----S---------KTIINLKGIAIGNAWIDDNLCTKGMF-DFFWTHA-LNSDETNAAINKYCDFA 294 (452)
Q Consensus 244 ----~---------~~~inLkGI~IGNg~id~~~~~~~~~-~y~~~~g-lIs~~~~~~i~~~C~~~ 294 (452)
+ ...-.|+-+.++|-..-+.+-..++. .-+...| -++-..+.+-..-|...
T Consensus 131 ~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p 196 (281)
T COG4757 131 FAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHP 196 (281)
T ss_pred eeEeccccccccchhhhhcccceeeccccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCc
Confidence 0 11245677777776666655544432 2233334 34555667777788764
No 176
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=37.58 E-value=50 Score=33.46 Aligned_cols=46 Identities=11% Similarity=-0.007 Sum_probs=34.1
Q ss_pred CCeEEEEecCCCcccCchhHHHHHHhCCCCCCcceeceEeCCeEEEEEecCccccC
Q 012985 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGWWICARVQGSDIHH 451 (452)
Q Consensus 396 girVlIYsGD~D~i~p~~Gt~~wi~~L~w~~~~~w~pW~~~g~~~~~~~~g~~~~~ 451 (452)
.+++|+.+|+.|.+++..+++.+.+++.-+ +...+..-+.+|++++
T Consensus 270 ~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~----------~~~l~~~~g~~H~i~~ 315 (332)
T TIGR01607 270 DIPILFIHSKGDCVCSYEGTVSFYNKLSIS----------NKELHTLEDMDHVITI 315 (332)
T ss_pred CCCEEEEEeCCCCccCHHHHHHHHHhccCC----------CcEEEEECCCCCCCcc
Confidence 589999999999999999999888775432 2233344466777764
No 177
>PRK10349 carboxylesterase BioH; Provisional
Probab=37.56 E-value=59 Score=30.79 Aligned_cols=46 Identities=11% Similarity=-0.081 Sum_probs=34.4
Q ss_pred HcCCeEEEEecCCCcccCchhHHHHHHhCCCCCCcceeceEeCCeEEEEEecCccccC
Q 012985 394 ASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGWWICARVQGSDIHH 451 (452)
Q Consensus 394 ~~girVlIYsGD~D~i~p~~Gt~~wi~~L~w~~~~~w~pW~~~g~~~~~~~~g~~~~~ 451 (452)
+-.++|+|..|..|.++|....+...+.+ .+...+.+.+.||+++.
T Consensus 194 ~i~~P~lii~G~~D~~~~~~~~~~~~~~i------------~~~~~~~i~~~gH~~~~ 239 (256)
T PRK10349 194 NVSMPFLRLYGYLDGLVPRKVVPMLDKLW------------PHSESYIFAKAAHAPFI 239 (256)
T ss_pred hcCCCeEEEecCCCccCCHHHHHHHHHhC------------CCCeEEEeCCCCCCccc
Confidence 34689999999999999987765444442 34467888889998763
No 178
>PRK10749 lysophospholipase L2; Provisional
Probab=37.40 E-value=31 Score=34.68 Aligned_cols=50 Identities=8% Similarity=-0.068 Sum_probs=36.2
Q ss_pred CCeEEEEecCCCcccCchhHHHHHHhCCCCCCcceeceEeCCeEEEEEecCcccc
Q 012985 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGWWICARVQGSDIH 450 (452)
Q Consensus 396 girVlIYsGD~D~i~p~~Gt~~wi~~L~w~~~~~w~pW~~~g~~~~~~~~g~~~~ 450 (452)
.++|||.+|+.|.+||..+++.+.+.++-.+. +..+.+.+..-+.||+++
T Consensus 259 ~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~-----~~~~~~l~~~~gagH~~~ 308 (330)
T PRK10749 259 TTPLLLLQAEEERVVDNRMHDRFCEARTAAGH-----PCEGGKPLVIKGAYHEIL 308 (330)
T ss_pred CCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCC-----CCCCceEEEeCCCcchhh
Confidence 58999999999999999999988877643221 112334555667888765
No 179
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=36.60 E-value=32 Score=24.43 Aligned_cols=32 Identities=13% Similarity=0.049 Sum_probs=25.4
Q ss_pred ccccccccccchhhhhhccCCCCHHHHHHHHH
Q 012985 258 AWIDDNLCTKGMFDFFWTHALNSDETNAAINK 289 (452)
Q Consensus 258 g~id~~~~~~~~~~y~~~~glIs~~~~~~i~~ 289 (452)
|.+||.+...-..+=+...|+||.+++..+.+
T Consensus 12 Giidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 12 GIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp SEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 77899887776677899999999999887754
No 180
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=36.08 E-value=55 Score=30.91 Aligned_cols=43 Identities=19% Similarity=0.254 Sum_probs=32.3
Q ss_pred CCeEEEEecCCCcccCchhHHHHHHhCCCCCCcceeceEeCCeEEEEEecCcccc
Q 012985 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGWWICARVQGSDIH 450 (452)
Q Consensus 396 girVlIYsGD~D~i~p~~Gt~~wi~~L~w~~~~~w~pW~~~g~~~~~~~~g~~~~ 450 (452)
.++|+|..|+.|.++|....+.+.+.+. +...+.+.+.||+++
T Consensus 220 ~~P~lii~g~~D~~vp~~~~~~~~~~~~------------~~~~~~~~~~gH~~~ 262 (278)
T TIGR03056 220 TIPLHLIAGEEDKAVPPDESKRAATRVP------------TATLHVVPGGGHLVH 262 (278)
T ss_pred CCCEEEEEeCCCcccCHHHHHHHHHhcc------------CCeEEEECCCCCccc
Confidence 5899999999999999887777766542 234455667788754
No 181
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=35.84 E-value=72 Score=29.50 Aligned_cols=85 Identities=16% Similarity=0.207 Sum_probs=53.2
Q ss_pred ceeEEEecCCCccc-cccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCC
Q 012985 166 ANVLFLETPAGVGF-SYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTS 244 (452)
Q Consensus 166 anvlfiDqPvGvGf-Sy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~ 244 (452)
.++--|+-|+..+. +|.. +...-+.++...++.+..+.| +.+|.|+|-|=|+..+-.++.. .....
T Consensus 40 ~~~~~V~YpA~~~~~~y~~--------S~~~G~~~~~~~i~~~~~~CP---~~kivl~GYSQGA~V~~~~~~~--~~l~~ 106 (179)
T PF01083_consen 40 VAVQGVEYPASLGPNSYGD--------SVAAGVANLVRLIEEYAARCP---NTKIVLAGYSQGAMVVGDALSG--DGLPP 106 (179)
T ss_dssp EEEEE--S---SCGGSCHH--------HHHHHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHH--TTSSH
T ss_pred eEEEecCCCCCCCcccccc--------cHHHHHHHHHHHHHHHHHhCC---CCCEEEEecccccHHHHHHHHh--ccCCh
Confidence 34555778888777 3432 445677888899999999999 5689999999999888777665 00001
Q ss_pred Cceeeeee-eEEeccccccc
Q 012985 245 KTIINLKG-IAIGNAWIDDN 263 (452)
Q Consensus 245 ~~~inLkG-I~IGNg~id~~ 263 (452)
...=++.+ +++|||.-.+.
T Consensus 107 ~~~~~I~avvlfGdP~~~~~ 126 (179)
T PF01083_consen 107 DVADRIAAVVLFGDPRRGAG 126 (179)
T ss_dssp HHHHHEEEEEEES-TTTBTT
T ss_pred hhhhhEEEEEEecCCcccCC
Confidence 11224566 57899887543
No 182
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=35.84 E-value=77 Score=28.69 Aligned_cols=30 Identities=23% Similarity=0.315 Sum_probs=24.8
Q ss_pred HcCCeEEEEecCCCcccCchhHHHHHHhCC
Q 012985 394 ASGIRVWIYSGDTDGRVPVTSSRYSINALN 423 (452)
Q Consensus 394 ~~girVlIYsGD~D~i~p~~Gt~~wi~~L~ 423 (452)
+-..+|++.+|+.|.++|....+.+.+.+.
T Consensus 191 ~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~ 220 (251)
T TIGR02427 191 AIAVPTLCIAGDQDGSTPPELVREIADLVP 220 (251)
T ss_pred hcCCCeEEEEeccCCcCChHHHHHHHHhCC
Confidence 346899999999999999988777776653
No 183
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=34.40 E-value=36 Score=31.54 Aligned_cols=33 Identities=33% Similarity=0.304 Sum_probs=28.8
Q ss_pred cCCeEEEEecCCCcccCchhHHHHHHhCCCCCC
Q 012985 395 SGIRVWIYSGDTDGRVPVTSSRYSINALNLPVE 427 (452)
Q Consensus 395 ~girVlIYsGD~D~i~p~~Gt~~wi~~L~w~~~ 427 (452)
...+|||.+|+.|.+||...++.+.++|+-.+.
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~ 175 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGK 175 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTS
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCC
Confidence 458999999999999999999999999884443
No 184
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=34.25 E-value=15 Score=26.00 Aligned_cols=18 Identities=22% Similarity=-0.022 Sum_probs=14.8
Q ss_pred hHHhhhcCcHHHHhhccC
Q 012985 348 KYVNSYLNLAEVQAALHA 365 (452)
Q Consensus 348 ~~~~~YLN~~dVq~ALhv 365 (452)
.-+-.-|++||||++|++
T Consensus 14 ~gl~~~l~DpdvqrgL~~ 31 (42)
T PF07849_consen 14 FGLLRALRDPDVQRGLGF 31 (42)
T ss_pred HHHHHHHcCHHHHHHHHH
Confidence 345677999999999985
No 185
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=34.18 E-value=61 Score=33.74 Aligned_cols=120 Identities=13% Similarity=0.234 Sum_probs=68.1
Q ss_pred CCCCCeEEEECCCCChhhhhhhhhhhcCCeeE----cCCCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCC
Q 012985 117 SSSKPLVLWLNGGPGCSSLGYGAMEELGPFRV----NSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPG 192 (452)
Q Consensus 117 ~~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v----~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~ 192 (452)
...+-++++++| |.+-.|=+++|. +..+...+.=-+||-..+++ -+|. -
T Consensus 113 s~~k~vlvFvHG--------fNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l-----------------~~Yn--~ 165 (377)
T COG4782 113 SSAKTVLVFVHG--------FNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSL-----------------LGYN--Y 165 (377)
T ss_pred cCCCeEEEEEcc--------cCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCee-----------------eecc--c
Confidence 367899999998 777777778773 22221122222334333331 1232 3
Q ss_pred ChhhHHHHHHHHHHHHHHCCCC-CCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccccccc
Q 012985 193 DNNTAEDSYTFLVNWFERFPQY-KNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDN 263 (452)
Q Consensus 193 ~~~~A~d~~~fL~~f~~~fPey-~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~~ 263 (452)
|++.++.....|.+.+..--+= .-+++||..||.|.--+-..-+++.-++.......++=+++-.|-+|-.
T Consensus 166 DreS~~~Sr~aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~D 237 (377)
T COG4782 166 DRESTNYSRPALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVD 237 (377)
T ss_pred chhhhhhhHHHHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChh
Confidence 4444444444444444322111 1468999999998876666666665554111455678888887777753
No 186
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=33.53 E-value=93 Score=30.72 Aligned_cols=43 Identities=19% Similarity=0.175 Sum_probs=32.9
Q ss_pred CCeEEEEecCCCcccCchhHHHHHHhCCCCCCcceeceEeCCeEEEEEecCcccc
Q 012985 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGWWICARVQGSDIH 450 (452)
Q Consensus 396 girVlIYsGD~D~i~p~~Gt~~wi~~L~w~~~~~w~pW~~~g~~~~~~~~g~~~~ 450 (452)
.++++|.+|+.|.+||...++..-+++. +.+.+.+.+.||..+
T Consensus 248 ~~P~lii~g~~D~~~p~~~~~~~~~~~~------------~~~~~~~~~~gH~~~ 290 (306)
T TIGR01249 248 NIPTYIVHGRYDLCCPLQSAWALHKAFP------------EAELKVTNNAGHSAF 290 (306)
T ss_pred CCCeEEEecCCCCCCCHHHHHHHHHhCC------------CCEEEEECCCCCCCC
Confidence 4899999999999999988777776643 244555667788764
No 187
>PTZ00333 triosephosphate isomerase; Provisional
Probab=32.97 E-value=87 Score=30.97 Aligned_cols=61 Identities=15% Similarity=0.335 Sum_probs=46.8
Q ss_pred ChhhHHHHHHHHHHHHH-HCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccccc
Q 012985 193 DNNTAEDSYTFLVNWFE-RFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (452)
Q Consensus 193 ~~~~A~d~~~fL~~f~~-~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~ 262 (452)
+.+.++++..++++++. +|.......+-|. |||-.-|.-+..|.... ++.|++||.+.+++
T Consensus 181 ~~e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~~------~vDG~LvG~asl~~ 242 (255)
T PTZ00333 181 TPEQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQP------DIDGFLVGGASLKP 242 (255)
T ss_pred CHHHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcCC------CCCEEEEehHhhhh
Confidence 35678999999999886 3543333345454 99999999999987753 68999999999874
No 188
>PF15253 STIL_N: SCL-interrupting locus protein N-terminus
Probab=32.80 E-value=47 Score=35.09 Aligned_cols=37 Identities=43% Similarity=0.743 Sum_probs=28.1
Q ss_pred ceeEeeEEEecCCCCceEEEEEEecCCCCCCCCeE-EEECC
Q 012985 89 FDQYAGYLTVDPKAGRALFYYFVESPQSSSSKPLV-LWLNG 128 (452)
Q Consensus 89 ~~~ysGyv~V~~~~~~~lFy~f~ea~~~~~~~Pl~-lWlnG 128 (452)
...-.|||+.|+. |++.. +.|+.....+.||| +||.|
T Consensus 198 ~~~k~GfLTmDqt--Rkl~l-LlesDpk~~slPLVGiWlsG 235 (410)
T PF15253_consen 198 GTYKSGFLTMDQT--RKLLL-LLESDPKASSLPLVGIWLSG 235 (410)
T ss_pred cccccceeeEccc--cceEE-EeccCCCccCCCceeeEecC
Confidence 3457999999864 77777 78886555677876 89987
No 189
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=32.57 E-value=31 Score=32.79 Aligned_cols=35 Identities=20% Similarity=0.327 Sum_probs=28.7
Q ss_pred HHHHHHCCCCCCCCEEEEeccccccccHHHHHHHH
Q 012985 205 VNWFERFPQYKNRDFFITGESYAGHYVPQLAYTIL 239 (452)
Q Consensus 205 ~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~ 239 (452)
.+|++..|+....++-|.|-|.||-.+-.+|.+.-
T Consensus 10 i~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~ 44 (213)
T PF08840_consen 10 IDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP 44 (213)
T ss_dssp HHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS
T ss_pred HHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC
Confidence 35778999999899999999999999988888753
No 190
>PRK15492 triosephosphate isomerase; Provisional
Probab=32.43 E-value=1e+02 Score=30.56 Aligned_cols=60 Identities=17% Similarity=0.297 Sum_probs=46.8
Q ss_pred hhhHHHHHHHHHHHHH-HCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccccccc
Q 012985 194 NNTAEDSYTFLVNWFE-RFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDN 263 (452)
Q Consensus 194 ~~~A~d~~~fL~~f~~-~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~~ 263 (452)
.+.+++...++++++. .+.+- ..++-|. |||-.-|.-+..|.... ++.|++||.+-+|+.
T Consensus 188 ~e~~~~~~~~Ir~~l~~~~~~~-~~~irIL---YGGSV~~~N~~~l~~~~------diDG~LvG~aSl~~~ 248 (260)
T PRK15492 188 ADYADEKHAVIKQCLIELFGDA-GDDIPVF---YGGSVNAENANELFGQP------HIDGLFIGRSAWDAD 248 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhccc-cCceeEE---EcCccCHHHHHHHhcCC------CCCEEEeehhhcCHH
Confidence 4567889999999864 45332 3345555 99999999999998764 689999999999874
No 191
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=32.11 E-value=1.1e+02 Score=30.45 Aligned_cols=67 Identities=18% Similarity=0.075 Sum_probs=43.1
Q ss_pred hhhHHHHHHHHHHHHHHCCC--C-CCCCEEEEeccccccccHHHHHHHHHcCCCCceee--eeeeEEeccccccc
Q 012985 194 NNTAEDSYTFLVNWFERFPQ--Y-KNRDFFITGESYAGHYVPQLAYTILSKNTSKTIIN--LKGIAIGNAWIDDN 263 (452)
Q Consensus 194 ~~~A~d~~~fL~~f~~~fPe--y-~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~in--LkGI~IGNg~id~~ 263 (452)
...|..+++.++.-.+..+. + .+.++.|+|.|=||+=. ..|..+... -.+.++ |+|.+.|.+..|..
T Consensus 45 ~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa-~~AA~l~~~--YApeL~~~l~Gaa~gg~~~dl~ 116 (290)
T PF03583_consen 45 RSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAA-LWAAELAPS--YAPELNRDLVGAAAGGPPADLA 116 (290)
T ss_pred HhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHH-HHHHHHhHH--hCcccccceeEEeccCCccCHH
Confidence 34566666666664444432 2 35789999999888765 334333222 135678 99999999877653
No 192
>TIGR03341 YhgI_GntY IscR-regulated protein YhgI. IscR (TIGR02010) is an iron-sulfur cluster-binding transcriptional regulator (see Genome Property GenProp0138). Members of this protein family include YhgI, whose expression is under control of IscR, and show sequence similarity to IscA, a known protein of iron-sulfur cluster biosynthesis. These two lines of evidence strongly suggest a role as an iron-sulfur cluster biosynthesis protein. An older study designated this protein GntY and suggested a role for it and for the product of an adjacent gene, based on complementation studies, in gluconate utilization.
Probab=32.10 E-value=86 Score=29.58 Aligned_cols=64 Identities=11% Similarity=0.202 Sum_probs=42.6
Q ss_pred CeEEEECCCCChhhhhhhhh----hhcC--CeeEcCCCCccccCCCC--ccccceeEEEecCCCccccccCCC
Q 012985 121 PLVLWLNGGPGCSSLGYGAM----EELG--PFRVNSDGKTLYRNEYA--WNNVANVLFLETPAGVGFSYSNTS 185 (452)
Q Consensus 121 Pl~lWlnGGPGcSS~~~g~~----~E~G--P~~v~~~~~~l~~N~~s--W~~~anvlfiDqPvGvGfSy~~~~ 185 (452)
.|=|-+.|| |||++.|+.- .|.. =..+..+|-++.-.+.| +-+-+-|=|+|...|.||.+.|..
T Consensus 23 ~LRv~V~~g-GCsG~~Y~l~~~~~~~~~~~D~v~e~~g~~v~Vd~~s~~~L~g~~IDyve~~~g~gF~f~NPn 94 (190)
T TIGR03341 23 GIRVFVVNP-GTPYAECCVSYCPPDEVEPSDIKLEFNGFSAYVDALSAPFLEDAVIDFVTDRMGGQLTLKAPN 94 (190)
T ss_pred eEEEEEECC-ccCCceeeeEEcccCCCCCCCEEEEeCCEEEEEccchhhHhCCCEEEEeecCCCceeEEeCCc
Confidence 466667775 9998766542 2322 23444455555545544 677788999999999999997653
No 193
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=31.50 E-value=95 Score=33.59 Aligned_cols=50 Identities=14% Similarity=0.073 Sum_probs=37.6
Q ss_pred HHHHHH-cCCeEEEEecCCCcccCchhHHHHHHhCCCCCCcceeceEeCCeEEEEEecCcccc
Q 012985 389 IQQLIA-SGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGWWICARVQGSDIH 450 (452)
Q Consensus 389 i~~LL~-~girVlIYsGD~D~i~p~~Gt~~wi~~L~w~~~~~w~pW~~~g~~~~~~~~g~~~~ 450 (452)
+..+++ -.++|||..|+.|.++|....+...+.+. +.+...+-++||+.+
T Consensus 410 l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP------------~a~l~vI~~aGH~~~ 460 (481)
T PLN03087 410 LDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVP------------RARVKVIDDKDHITI 460 (481)
T ss_pred HHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCC------------CCEEEEeCCCCCcch
Confidence 445553 36899999999999999998887666653 345567788899754
No 194
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=31.47 E-value=36 Score=28.06 Aligned_cols=36 Identities=22% Similarity=0.391 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHc
Q 012985 198 EDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSK 241 (452)
Q Consensus 198 ~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~ 241 (452)
-|+|++.+.|+-++ |..+.|.+-|+|| .+-+-|++.
T Consensus 7 vdIYDAvRaflLr~--Y~~KrfIV~g~S~------~IlhNIyrl 42 (100)
T PF07389_consen 7 VDIYDAVRAFLLRH--YYDKRFIVYGRSN------AILHNIYRL 42 (100)
T ss_pred hhHHHHHHHHHHHH--HccceEEEecchH------HHHHHHHHH
Confidence 57888888888876 5678999999999 455555543
No 195
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=31.35 E-value=1.1e+02 Score=29.92 Aligned_cols=59 Identities=19% Similarity=0.401 Sum_probs=46.1
Q ss_pred hhhHHHHHHHHHHHHHH-CCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccccc
Q 012985 194 NNTAEDSYTFLVNWFER-FPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDD 262 (452)
Q Consensus 194 ~~~A~d~~~fL~~f~~~-fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~ 262 (452)
.+.+++...|+++++.. +.+ ....+-|. |||-.-|.=+..|++.. ++.|++||.+.+++
T Consensus 175 ~~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~~------~vDG~LVG~Asl~~ 234 (242)
T cd00311 175 PEQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQP------DIDGVLVGGASLKA 234 (242)
T ss_pred HHHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcCC------CCCEEEeehHhhCH
Confidence 45688999999999864 433 33445555 99999999999988763 58999999999975
No 196
>PRK03204 haloalkane dehalogenase; Provisional
Probab=30.87 E-value=60 Score=31.83 Aligned_cols=45 Identities=11% Similarity=-0.052 Sum_probs=31.4
Q ss_pred CCeEEEEecCCCcccCchhHHHHHHhCCCCCCcceeceEeCCeEEEEEecCccccC
Q 012985 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGWWICARVQGSDIHH 451 (452)
Q Consensus 396 girVlIYsGD~D~i~p~~Gt~~wi~~L~w~~~~~w~pW~~~g~~~~~~~~g~~~~~ 451 (452)
..+|+|..|+.|.+++.......+.+ -..+.+...+.+.||++|+
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~-----------~ip~~~~~~i~~aGH~~~~ 271 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRA-----------TFPDHVLVELPNAKHFIQE 271 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHH-----------hcCCCeEEEcCCCcccccc
Confidence 69999999999998876654333332 1233466777888998774
No 197
>PF15128 T_cell_tran_alt: T-cell leukemia translocation-altered
Probab=30.46 E-value=37 Score=27.81 Aligned_cols=25 Identities=36% Similarity=0.478 Sum_probs=22.3
Q ss_pred CceehhHHHHHHHHHHhhHHhhhhh
Q 012985 1 MKVSLTTTTTWWLLLSLSCYQLACY 25 (452)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~ 25 (452)
|||+|--.-+-||+|++-+.++|=+
T Consensus 23 mrv~ifkllL~WlvlsLl~I~lAWk 47 (92)
T PF15128_consen 23 MRVQIFKLLLGWLVLSLLAIHLAWK 47 (92)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999988888865
No 198
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=30.42 E-value=4.2e+02 Score=26.43 Aligned_cols=36 Identities=22% Similarity=0.377 Sum_probs=22.5
Q ss_pred HHHHHHHHHH----HHHH-CCCCCCCCEEEEeccccccccHH
Q 012985 197 AEDSYTFLVN----WFER-FPQYKNRDFFITGESYAGHYVPQ 233 (452)
Q Consensus 197 A~d~~~fL~~----f~~~-fPey~~~~~yi~GESYgG~yvP~ 233 (452)
|+.+.+||.+ |.+. .+- +..+--|+||||||-++-.
T Consensus 113 ~~~f~~fL~~~lkP~Ie~~y~~-~~~~~~i~GhSlGGLfvl~ 153 (264)
T COG2819 113 GDAFREFLTEQLKPFIEARYRT-NSERTAIIGHSLGGLFVLF 153 (264)
T ss_pred hHHHHHHHHHhhHHHHhccccc-CcccceeeeecchhHHHHH
Confidence 4555566654 3333 332 3335899999999987743
No 199
>COG3896 Chloramphenicol 3-O-phosphotransferase [Defense mechanisms]
Probab=30.02 E-value=38 Score=31.48 Aligned_cols=28 Identities=36% Similarity=0.615 Sum_probs=22.0
Q ss_pred CCCeEEEECCCC--Chhhhhhhhhhhc--CCee
Q 012985 119 SKPLVLWLNGGP--GCSSLGYGAMEEL--GPFR 147 (452)
Q Consensus 119 ~~Pl~lWlnGGP--GcSS~~~g~~~E~--GP~~ 147 (452)
..--++.||||| |-||+. -+|||+ |||.
T Consensus 21 ~~griVlLNG~~saGKSSiA-~A~Q~~~a~pwm 52 (205)
T COG3896 21 PEGRIVLLNGGSSAGKSSIA-LAFQDLAAEPWM 52 (205)
T ss_pred CCceEEEecCCCccchhHHH-HHHHHHhhcchh
Confidence 334578899987 779996 899987 7874
No 200
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=29.36 E-value=92 Score=27.52 Aligned_cols=45 Identities=18% Similarity=0.161 Sum_probs=32.5
Q ss_pred HcCCeEEEEecCCCcccCchhHHHHHHhCCCCCCcceeceEeCCeEEEEEecCcccc
Q 012985 394 ASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGWWICARVQGSDIH 450 (452)
Q Consensus 394 ~~girVlIYsGD~D~i~p~~Gt~~wi~~L~w~~~~~w~pW~~~g~~~~~~~~g~~~~ 450 (452)
.-..+|++..|+.|.+++..-.+.+.+.+. . .+++.+.+.||+++
T Consensus 174 ~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~--~----------~~~~~~~~~gH~~~ 218 (228)
T PF12697_consen 174 RIKVPVLVIHGEDDPIVPPESAEELADKLP--N----------AELVVIPGAGHFLF 218 (228)
T ss_dssp GSSSEEEEEEETTSSSSHHHHHHHHHHHST--T----------EEEEEETTSSSTHH
T ss_pred ccCCCeEEeecCCCCCCCHHHHHHHHHHCC--C----------CEEEEECCCCCccH
Confidence 347999999999999999555555555542 1 24566777888865
No 201
>TIGR02011 IscA iron-sulfur cluster assembly protein IscA. This clade is limited to the proteobacteria.
Probab=28.98 E-value=44 Score=28.10 Aligned_cols=65 Identities=20% Similarity=0.325 Sum_probs=41.7
Q ss_pred CCCeEEEECCCCChhhhhhhhh--hhcCCe--eEcCCCCccccCCC--CccccceeEEEecCCCccccccCC
Q 012985 119 SKPLVLWLNGGPGCSSLGYGAM--EELGPF--RVNSDGKTLYRNEY--AWNNVANVLFLETPAGVGFSYSNT 184 (452)
Q Consensus 119 ~~Pl~lWlnGGPGcSS~~~g~~--~E~GP~--~v~~~~~~l~~N~~--sW~~~anvlfiDqPvGvGfSy~~~ 184 (452)
..+|=|.+.+| |||++.|.+- .|..+- .+..+|-++...+. .+-+-+-|=|+|.+.|.||...+.
T Consensus 21 ~~~lRi~v~~~-GCsG~~y~l~l~~~~~~~D~v~~~~g~~v~id~~s~~~l~g~~IDy~~~~~~~~F~~~nP 91 (105)
T TIGR02011 21 GFGLRLGVKTS-GCSGMAYVLEFVDEPTPDDIVFEDKGVKIVIDGKSLQYLDGTQLDFVKEGLNEGFKFTNP 91 (105)
T ss_pred CceEEEEEeCC-CCCCEEEEeeecCCCCCCCEEEEcCCEEEEEcHHHhHHhCCCEEEEecCCCcceEEEECC
Confidence 34667777776 9998656543 354443 33444544444443 356667889999999999988653
No 202
>PRK14565 triosephosphate isomerase; Provisional
Probab=28.56 E-value=1e+02 Score=30.17 Aligned_cols=55 Identities=20% Similarity=0.355 Sum_probs=42.8
Q ss_pred CChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccccccc
Q 012985 192 GDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDN 263 (452)
Q Consensus 192 ~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~~ 263 (452)
-+.+.++++..+++++. .++-|. |||..-|.-+..+.... ++.|++||.+.+++.
T Consensus 171 a~~e~i~~~~~~Ir~~~--------~~~~Il---YGGSV~~~N~~~l~~~~------~iDG~LvG~asl~~~ 225 (237)
T PRK14565 171 PSNDAIAEAFEIIRSYD--------SKSHII---YGGSVNQENIRDLKSIN------QLSGVLVGSASLDVD 225 (237)
T ss_pred CCHHHHHHHHHHHHHhC--------CCceEE---EcCccCHhhHHHHhcCC------CCCEEEEechhhcHH
Confidence 34567899999999863 233333 99999999999988753 589999999999864
No 203
>PF04414 tRNA_deacylase: D-aminoacyl-tRNA deacylase; InterPro: IPR007508 D-aminoacyl-tRNA deacylases hydrolyse the ester bond between the polynucleotide and the D-amino acid, thereby preventing the accumulation of such mis-acylated and metabolically inactive tRNA molecules. Several aminoacyl-tRNA synthetases have the ability to transfer the D-isomer of their amino acid onto their cognate tRNA. ; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 1YQE_A 2GFQ_B.
Probab=28.51 E-value=1.4e+02 Score=28.85 Aligned_cols=47 Identities=21% Similarity=0.254 Sum_probs=33.2
Q ss_pred CChhhHHHHHHHHHHHHHHCCCCCC-CCEEEEeccccccccHHHHHHHHHc
Q 012985 192 GDNNTAEDSYTFLVNWFERFPQYKN-RDFFITGESYAGHYVPQLAYTILSK 241 (452)
Q Consensus 192 ~~~~~A~d~~~fL~~f~~~fPey~~-~~~yi~GESYgG~yvP~lA~~I~~~ 241 (452)
+|+.+++.+.+.+...+..-++-.- +.+.-+| ||||.|.+...+++.
T Consensus 105 ~d~~a~~~vA~avl~~~~~~~~~~~~~~~ig~G---G~HYapr~t~~~l~~ 152 (213)
T PF04414_consen 105 NDPDAAEAVARAVLEVLESDEKAECCPVAIGFG---GGHYAPRFTKLALET 152 (213)
T ss_dssp T-HHHHHHHHHHHHHHHHHTTCSTT-EEEEEE----S-TT-HHHHHHHHHC
T ss_pred CChHHHHHHHHHHHHHhcccccccccceeEEec---CcccchhhhhhhhcC
Confidence 7788889888988888887654321 4566666 889999999999875
No 204
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=27.28 E-value=1.5e+02 Score=29.22 Aligned_cols=60 Identities=17% Similarity=0.304 Sum_probs=46.1
Q ss_pred hhhHHHHHHHHHHHHH-HCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccccccc
Q 012985 194 NNTAEDSYTFLVNWFE-RFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDN 263 (452)
Q Consensus 194 ~~~A~d~~~fL~~f~~-~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~~ 263 (452)
.+.++++..|+++++. +|. -...++-|. |||-.-|.=+..+... .++.|++||.+.+++.
T Consensus 179 ~~~~~~v~~~Ir~~l~~~~~-~~~~~~~Il---YGGSV~~~N~~~l~~~------~~vDG~LVG~Asl~~~ 239 (250)
T PRK00042 179 PEQAQEVHAFIRAVLAELYG-EVAEKVRIL---YGGSVKPDNAAELMAQ------PDIDGALVGGASLKAE 239 (250)
T ss_pred HHHHHHHHHHHHHHHHHhcc-cccCCceEE---EcCCCCHHHHHHHhcC------CCCCEEEEeeeeechH
Confidence 4678999999999986 343 223344444 9999999999998765 3689999999998763
No 205
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=27.22 E-value=49 Score=31.38 Aligned_cols=45 Identities=18% Similarity=0.124 Sum_probs=33.4
Q ss_pred HCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccccccc
Q 012985 210 RFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDN 263 (452)
Q Consensus 210 ~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~~ 263 (452)
+|+-...+ .+|+|.|.||.-+-.+|.+-.+. +.+++.-+|.+++.
T Consensus 109 ~~~~~~~~-~~i~G~S~GG~~Al~~~l~~Pd~--------F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 109 NYRTDPDR-RAIAGHSMGGYGALYLALRHPDL--------FGAVIAFSGALDPS 153 (251)
T ss_dssp HSSEEECC-EEEEEETHHHHHHHHHHHHSTTT--------ESEEEEESEESETT
T ss_pred hcccccce-eEEeccCCCcHHHHHHHHhCccc--------cccccccCcccccc
Confidence 56655555 89999999998887777553332 78888888887765
No 206
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=26.97 E-value=91 Score=31.48 Aligned_cols=29 Identities=14% Similarity=0.255 Sum_probs=25.2
Q ss_pred CCeEEEEecCCCcccCchhHHHHHHhCCC
Q 012985 396 GIRVWIYSGDTDGRVPVTSSRYSINALNL 424 (452)
Q Consensus 396 girVlIYsGD~D~i~p~~Gt~~wi~~L~w 424 (452)
.++|||.+|+.|.+||....+...+++.-
T Consensus 279 ~~P~Lii~G~~D~vv~~~~~~~l~~~~~~ 307 (349)
T PLN02385 279 SLPLLILHGEADKVTDPSVSKFLYEKASS 307 (349)
T ss_pred CCCEEEEEeCCCCccChHHHHHHHHHcCC
Confidence 68999999999999999888888777643
No 207
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=26.63 E-value=98 Score=30.16 Aligned_cols=40 Identities=23% Similarity=0.357 Sum_probs=24.5
Q ss_pred CChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHH
Q 012985 192 GDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYT 237 (452)
Q Consensus 192 ~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~ 237 (452)
+..+.|+.++..+. .| -+...+|++.+||||---..+..+
T Consensus 171 t~veh~~yvw~~~v-----~p-a~~~sv~vvahsyGG~~t~~l~~~ 210 (297)
T KOG3967|consen 171 TPVEHAKYVWKNIV-----LP-AKAESVFVVAHSYGGSLTLDLVER 210 (297)
T ss_pred chHHHHHHHHHHHh-----cc-cCcceEEEEEeccCChhHHHHHHh
Confidence 34455555554443 23 345689999999999755444443
No 208
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=26.42 E-value=3.2e+02 Score=30.02 Aligned_cols=85 Identities=9% Similarity=0.020 Sum_probs=51.0
Q ss_pred ceeEEEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCC
Q 012985 166 ANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSK 245 (452)
Q Consensus 166 anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~ 245 (452)
..|+-||-+ |-|.|....+ -++-..+.+..++..+.+.. ...+++++|+|.||..+...+.......
T Consensus 221 f~V~~iDwr-gpg~s~~~~~------~ddY~~~~i~~al~~v~~~~---g~~kv~lvG~cmGGtl~a~ala~~aa~~--- 287 (532)
T TIGR01838 221 HTVFVISWR-NPDASQADKT------FDDYIRDGVIAALEVVEAIT---GEKQVNCVGYCIGGTLLSTALAYLAARG--- 287 (532)
T ss_pred cEEEEEECC-CCCcccccCC------hhhhHHHHHHHHHHHHHHhc---CCCCeEEEEECcCcHHHHHHHHHHHHhC---
Confidence 567778864 5565532211 22233345666666666544 4678999999999998765333222221
Q ss_pred ceeeeeeeEEeccccccc
Q 012985 246 TIINLKGIAIGNAWIDDN 263 (452)
Q Consensus 246 ~~inLkGI~IGNg~id~~ 263 (452)
..-.++++.+-+..+|..
T Consensus 288 ~~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 288 DDKRIKSATFFTTLLDFS 305 (532)
T ss_pred CCCccceEEEEecCcCCC
Confidence 012478888888777754
No 209
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=26.36 E-value=75 Score=31.24 Aligned_cols=66 Identities=17% Similarity=0.241 Sum_probs=41.5
Q ss_pred ceeEEEecCCCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHcC
Q 012985 166 ANVLFLETPAGVGFSYSNTSSDYSNPGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKN 242 (452)
Q Consensus 166 anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n 242 (452)
.-++=|+-| |-|=-+... .. .+-++.|..+..-|+ |-++.+|+-++|+|+||...=.+|.++.+.-
T Consensus 34 iel~avqlP-GR~~r~~ep---~~-~di~~Lad~la~el~------~~~~d~P~alfGHSmGa~lAfEvArrl~~~g 99 (244)
T COG3208 34 IELLAVQLP-GRGDRFGEP---LL-TDIESLADELANELL------PPLLDAPFALFGHSMGAMLAFEVARRLERAG 99 (244)
T ss_pred hheeeecCC-CcccccCCc---cc-ccHHHHHHHHHHHhc------cccCCCCeeecccchhHHHHHHHHHHHHHcC
Confidence 346777766 444222211 11 233444444444332 2467899999999999999999999987763
No 210
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=25.88 E-value=95 Score=32.52 Aligned_cols=28 Identities=14% Similarity=0.118 Sum_probs=25.7
Q ss_pred CCeEEEEecCCCcccCchhHHHHHHhCC
Q 012985 396 GIRVWIYSGDTDGRVPVTSSRYSINALN 423 (452)
Q Consensus 396 girVlIYsGD~D~i~p~~Gt~~wi~~L~ 423 (452)
.+++||.+|+.|.++|...++.+.+++.
T Consensus 324 ~vPvLIi~G~~D~vvp~~~a~~l~~~~~ 351 (395)
T PLN02652 324 TVPFMVLHGTADRVTDPLASQDLYNEAA 351 (395)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhcC
Confidence 6999999999999999999999988753
No 211
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=25.33 E-value=46 Score=31.03 Aligned_cols=29 Identities=17% Similarity=0.014 Sum_probs=24.6
Q ss_pred CeEEEEecCCCcccCchhHHHHHHhCCCC
Q 012985 397 IRVWIYSGDTDGRVPVTSSRYSINALNLP 425 (452)
Q Consensus 397 irVlIYsGD~D~i~p~~Gt~~wi~~L~w~ 425 (452)
-+++|++|+.|.+||....+...++|+--
T Consensus 169 p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 169 PIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred CeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 45789999999999999999988877543
No 212
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=24.97 E-value=96 Score=35.58 Aligned_cols=93 Identities=20% Similarity=0.280 Sum_probs=51.4
Q ss_pred EEEECCCCCh----hhhh--hhhhhhcCCeeEcCCCCccccCCCCccccceeEEEecCCCccccccCCCCCCCCCCChhh
Q 012985 123 VLWLNGGPGC----SSLG--YGAMEELGPFRVNSDGKTLYRNEYAWNNVANVLFLETPAGVGFSYSNTSSDYSNPGDNNT 196 (452)
Q Consensus 123 ~lWlnGGPGc----SS~~--~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGvGfSy~~~~~~~~~~~~~~~ 196 (452)
||++-|--|+ =|++ --+-...||++=..+ .+||++. +.+-|=|=| -||. ..-..-.+.
T Consensus 92 VLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~----~d~~~~~-DFFaVDFnE-----e~tA------m~G~~l~dQ 155 (973)
T KOG3724|consen 92 VLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTED----RDNPFSF-DFFAVDFNE-----EFTA------MHGHILLDQ 155 (973)
T ss_pred EEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhc----ccCcccc-ceEEEcccc-----hhhh------hccHhHHHH
Confidence 6778776664 2332 123335799983322 3466665 332222211 1221 111133567
Q ss_pred HHHHHHHHHHHHH---HCCCCC---CCCEEEEecccccccc
Q 012985 197 AEDSYTFLVNWFE---RFPQYK---NRDFFITGESYAGHYV 231 (452)
Q Consensus 197 A~d~~~fL~~f~~---~fPey~---~~~~yi~GESYgG~yv 231 (452)
+|.+.+++..-+. +-+||+ ...+.|.|||+||..+
T Consensus 156 tEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVA 196 (973)
T KOG3724|consen 156 TEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVA 196 (973)
T ss_pred HHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHH
Confidence 7777777665554 445666 5569999999999643
No 213
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=24.67 E-value=58 Score=28.79 Aligned_cols=17 Identities=41% Similarity=0.635 Sum_probs=14.8
Q ss_pred CCCCCeEEEECCCCChh
Q 012985 117 SSSKPLVLWLNGGPGCS 133 (452)
Q Consensus 117 ~~~~Pl~lWlnGGPGcS 133 (452)
...+||||-|+|.||+.
T Consensus 49 ~p~KpLVlSfHG~tGtG 65 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTG 65 (127)
T ss_pred CCCCCEEEEeecCCCCc
Confidence 46789999999999974
No 214
>PRK13604 luxD acyl transferase; Provisional
Probab=24.60 E-value=86 Score=31.89 Aligned_cols=35 Identities=11% Similarity=0.223 Sum_probs=28.4
Q ss_pred HHHHHHcCCeEEEEecCCCcccCchhHHHHHHhCC
Q 012985 389 IQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALN 423 (452)
Q Consensus 389 i~~LL~~girVlIYsGD~D~i~p~~Gt~~wi~~L~ 423 (452)
++.+-+-..+||+++|+.|..||..+++...++++
T Consensus 195 i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~ 229 (307)
T PRK13604 195 INKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIR 229 (307)
T ss_pred HHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhc
Confidence 33333335899999999999999999999998864
No 215
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=24.56 E-value=1.3e+02 Score=28.01 Aligned_cols=47 Identities=9% Similarity=0.017 Sum_probs=32.1
Q ss_pred HHHHcCCeEEEEecCCCcccCchhHHHHHHhCCCCCCcceeceEeCCeEEEEEecCcccc
Q 012985 391 QLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGWWICARVQGSDIH 450 (452)
Q Consensus 391 ~LL~~girVlIYsGD~D~i~p~~Gt~~wi~~L~w~~~~~w~pW~~~g~~~~~~~~g~~~~ 450 (452)
.|.+-.++|++.+|+.|.+ +....+.+.+.+. +...+.+.+.||+.+
T Consensus 226 ~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~------------~~~~~~~~~~gH~~~ 272 (288)
T TIGR01250 226 KLSEIKVPTLLTVGEFDTM-TPEAAREMQELIA------------GSRLVVFPDGSHMTM 272 (288)
T ss_pred HhhccCCCEEEEecCCCcc-CHHHHHHHHHhcc------------CCeEEEeCCCCCCcc
Confidence 3444569999999999985 4466666665542 124566778888765
No 216
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=24.43 E-value=61 Score=32.39 Aligned_cols=31 Identities=23% Similarity=0.301 Sum_probs=27.3
Q ss_pred CCeEEEEecCCCcccCchhHHHHHHhCCCCC
Q 012985 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPV 426 (452)
Q Consensus 396 girVlIYsGD~D~i~p~~Gt~~wi~~L~w~~ 426 (452)
..+|+||+|..|-++|+..++..++++-=.+
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G 249 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAG 249 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcC
Confidence 4799999999999999999999999865444
No 217
>PRK00870 haloalkane dehalogenase; Provisional
Probab=24.30 E-value=1.1e+02 Score=30.03 Aligned_cols=52 Identities=10% Similarity=-0.157 Sum_probs=32.2
Q ss_pred HHHHHcCCeEEEEecCCCcccCchhHHHHHHhCCCCCCcceeceEeCCeEEEEEecCccccC
Q 012985 390 QQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGWWICARVQGSDIHH 451 (452)
Q Consensus 390 ~~LL~~girVlIYsGD~D~i~p~~Gt~~wi~~L~w~~~~~w~pW~~~g~~~~~~~~g~~~~~ 451 (452)
+.|.+-.++|+|..|+.|.++|... +...+.+. .. .+ -..+.+.+.||++|.
T Consensus 233 ~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~--~~-~~------~~~~~i~~~gH~~~~ 284 (302)
T PRK00870 233 AVLERWDKPFLTAFSDSDPITGGGD-AILQKRIP--GA-AG------QPHPTIKGAGHFLQE 284 (302)
T ss_pred HhhhcCCCceEEEecCCCCcccCch-HHHHhhcc--cc-cc------cceeeecCCCccchh
Confidence 3445557999999999999999754 44333321 10 00 013456678888763
No 218
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=23.25 E-value=69 Score=30.87 Aligned_cols=26 Identities=15% Similarity=0.271 Sum_probs=22.0
Q ss_pred CCeEEEEecCCCcccCchhHHHHHHh
Q 012985 396 GIRVWIYSGDTDGRVPVTSSRYSINA 421 (452)
Q Consensus 396 girVlIYsGD~D~i~p~~Gt~~wi~~ 421 (452)
+++++|++|+.|.+|+....+..+++
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q 194 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQ 194 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHH
Confidence 56889999999999999987776654
No 219
>PRK03995 hypothetical protein; Provisional
Probab=23.09 E-value=1.5e+02 Score=29.64 Aligned_cols=47 Identities=17% Similarity=0.253 Sum_probs=32.5
Q ss_pred CChhhHHHHHHHHHHHHHHCCCCCCCCEEEEeccccccccHHHHHHHHHc
Q 012985 192 GDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSK 241 (452)
Q Consensus 192 ~~~~~A~d~~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~ 241 (452)
.|+.+++-+.+.+...++.-+.-..+.+.-+| ||||.|.+...+++.
T Consensus 157 ~d~~a~~~vA~avl~~l~~~~~~~~~~~iGiG---GgHYapr~T~~~l~~ 203 (267)
T PRK03995 157 KNERAGEILAEAVIEVLDSIEYEKFKPAIGIG---GGHYAPKFTKLALES 203 (267)
T ss_pred CCcHHHHHHHHHHHHHHhcccccCCCEEEEEC---CCCccHHHHHHHhhC
Confidence 66677777777777776532212334566666 889999999988865
No 220
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=23.07 E-value=65 Score=29.59 Aligned_cols=39 Identities=5% Similarity=0.012 Sum_probs=28.1
Q ss_pred CCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccccc
Q 012985 216 NRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWID 261 (452)
Q Consensus 216 ~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id 261 (452)
..+.+|+|||.|+.-+-..+. .+ ...+++|+++..|.-.
T Consensus 54 ~~~~ilVaHSLGc~~~l~~l~---~~----~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 54 DEPTILVAHSLGCLTALRWLA---EQ----SQKKVAGALLVAPFDP 92 (171)
T ss_dssp TTTEEEEEETHHHHHHHHHHH---HT----CCSSEEEEEEES--SC
T ss_pred CCCeEEEEeCHHHHHHHHHHh---hc----ccccccEEEEEcCCCc
Confidence 567999999999987666665 22 2457999999999844
No 221
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=22.97 E-value=4e+02 Score=28.66 Aligned_cols=34 Identities=15% Similarity=0.216 Sum_probs=23.5
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEeccccccccHHHH
Q 012985 201 YTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLA 235 (452)
Q Consensus 201 ~~fL~~f~~~fPey~~~~~yi~GESYgG~yvP~lA 235 (452)
++++++--..|-. ..+++-|+|+|.||..|-.+.
T Consensus 180 L~wv~~~I~~FGG-dp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 180 LRWVKDNIPSFGG-DPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred HHHHHHHHHhcCC-CCCeEEEEeechhHHHHHHHh
Confidence 4555555555642 345799999999999886544
No 222
>TIGR01997 sufA_proteo FeS assembly scaffold SufA. This model represents the SufA protein of the SUF system of iron-sulfur cluster biosynthesis. This system performs FeS biosynthesis even during oxidative stress and tends to be absent in obligate anaerobic and microaerophilic bacteria.
Probab=22.60 E-value=79 Score=26.62 Aligned_cols=64 Identities=22% Similarity=0.306 Sum_probs=38.9
Q ss_pred CCeEEEECCCCChhhhhhhhh--hhcCC--eeEcCCCCccccCCCC--ccccceeEEEecCCCccccccCC
Q 012985 120 KPLVLWLNGGPGCSSLGYGAM--EELGP--FRVNSDGKTLYRNEYA--WNNVANVLFLETPAGVGFSYSNT 184 (452)
Q Consensus 120 ~Pl~lWlnGGPGcSS~~~g~~--~E~GP--~~v~~~~~~l~~N~~s--W~~~anvlfiDqPvGvGfSy~~~ 184 (452)
..|=|-+.+| |||++.|.+= .|..| ..+..++-++...+.+ +-+-+-|=|++...|.||-+.+.
T Consensus 24 ~~lRi~v~~~-GC~G~~y~~~l~~~~~~~D~v~~~~g~~v~id~~s~~~l~g~~IDy~~~~~~~~F~~~NP 93 (107)
T TIGR01997 24 VGIRLGVKKT-GCAGMEYVLDLVSEPKKDDDLIEHDGAKVFVAPEAVLFILGTQVDFVRTTLRQGFKFNNP 93 (107)
T ss_pred cEEEEEEECC-CCCCcEEEeeecCCCCCCCEEEecCCEEEEEcHHHHhhhCCCEEEEEEcCCcceEEEECC
Confidence 3455556654 8888765431 23333 3344445455444444 55566788999999999988653
No 223
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=22.16 E-value=1.4e+02 Score=33.64 Aligned_cols=62 Identities=16% Similarity=0.283 Sum_probs=47.4
Q ss_pred ChhhHHHHHHHHHHHHH-HCCCCCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccccccc
Q 012985 193 DNNTAEDSYTFLVNWFE-RFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDN 263 (452)
Q Consensus 193 ~~~~A~d~~~fL~~f~~-~fPey~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~~ 263 (452)
+.+.|+++..|+++++. +|-+-....+=|. |||---|.-+..|.... ++.|++||.+-+++.
T Consensus 573 t~e~aqevh~~IR~~l~~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~------diDG~LVGgASL~~~ 635 (645)
T PRK13962 573 TPEQAQEVHAFIRKLVAELYGEEAARKVRIL---YGGSVKSENAAGLFNQP------DIDGGLVGGASLKAQ 635 (645)
T ss_pred CHHHHHHHHHHHHHHHHHHhChhhhccceEE---ecCCCCHhHHHHHhcCC------CCCeEEeehHhcCHH
Confidence 35689999999999996 3432222233343 99999999999998764 689999999998874
No 224
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=21.99 E-value=2.5e+02 Score=28.55 Aligned_cols=71 Identities=13% Similarity=0.071 Sum_probs=40.1
Q ss_pred CChhhHHHHHHHHHHHHHHCCC-CCCCCEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEeccccccccc
Q 012985 192 GDNNTAEDSYTFLVNWFERFPQ-YKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNLC 265 (452)
Q Consensus 192 ~~~~~A~d~~~fL~~f~~~fPe-y~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~~~~ 265 (452)
+-++.++|+-.+++-+-..... +...++.|+|||=|.-=+-... ...+.....-.++|+++-.|+-|.+..
T Consensus 82 SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl---~~~~~~~~~~~VdG~ILQApVSDREa~ 153 (303)
T PF08538_consen 82 SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYL---SSPNPSPSRPPVDGAILQAPVSDREAI 153 (303)
T ss_dssp -HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHH---HH-TT---CCCEEEEEEEEE---TTST
T ss_pred hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHH---hccCccccccceEEEEEeCCCCChhHh
Confidence 5566788887777655555322 4567899999999876544333 333311225679999999998887643
No 225
>PRK06762 hypothetical protein; Provisional
Probab=21.75 E-value=53 Score=29.27 Aligned_cols=13 Identities=15% Similarity=0.493 Sum_probs=11.3
Q ss_pred CeEEEECCCCChh
Q 012985 121 PLVLWLNGGPGCS 133 (452)
Q Consensus 121 Pl~lWlnGGPGcS 133 (452)
|.++|+.|.|||.
T Consensus 2 ~~li~i~G~~GsG 14 (166)
T PRK06762 2 TTLIIIRGNSGSG 14 (166)
T ss_pred CeEEEEECCCCCC
Confidence 7899999988873
No 226
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=21.06 E-value=57 Score=22.60 Aligned_cols=12 Identities=33% Similarity=1.043 Sum_probs=6.3
Q ss_pred CCeEEEECCCCC
Q 012985 120 KPLVLWLNGGPG 131 (452)
Q Consensus 120 ~Pl~lWlnGGPG 131 (452)
.--+||++|-||
T Consensus 24 ~gRTiWFqGdPG 35 (39)
T PF09292_consen 24 NGRTIWFQGDPG 35 (39)
T ss_dssp TS-EEEESS---
T ss_pred CCCEEEeeCCCC
Confidence 345799999888
No 227
>PRK07581 hypothetical protein; Validated
Probab=20.90 E-value=1.8e+02 Score=29.02 Aligned_cols=43 Identities=12% Similarity=0.048 Sum_probs=31.8
Q ss_pred CCeEEEEecCCCcccCchhHHHHHHhCCCCCCcceeceEeCCeEEEEEe-cCcccc
Q 012985 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGWWICARV-QGSDIH 450 (452)
Q Consensus 396 girVlIYsGD~D~i~p~~Gt~~wi~~L~w~~~~~w~pW~~~g~~~~~~~-~g~~~~ 450 (452)
.++|||..|+.|.++|....+.+.+.+ + +.+.+.+.+ .||+.+
T Consensus 275 ~~PtLvI~G~~D~~~p~~~~~~l~~~i--p----------~a~l~~i~~~~GH~~~ 318 (339)
T PRK07581 275 TAKTFVMPISTDLYFPPEDCEAEAALI--P----------NAELRPIESIWGHLAG 318 (339)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhC--C----------CCeEEEeCCCCCcccc
Confidence 589999999999999998888776655 1 124455555 687654
No 228
>PRK13623 iron-sulfur cluster insertion protein ErpA; Provisional
Probab=20.84 E-value=74 Score=27.16 Aligned_cols=62 Identities=27% Similarity=0.448 Sum_probs=36.5
Q ss_pred eEEEECCCCChhhhhhhhhhhc--CC--eeEcCCCCccccCCCC--ccccceeEEEecCCCccccccCC
Q 012985 122 LVLWLNGGPGCSSLGYGAMEEL--GP--FRVNSDGKTLYRNEYA--WNNVANVLFLETPAGVGFSYSNT 184 (452)
Q Consensus 122 l~lWlnGGPGcSS~~~g~~~E~--GP--~~v~~~~~~l~~N~~s--W~~~anvlfiDqPvGvGfSy~~~ 184 (452)
|-|.+.+| |||+..|++-.+. .+ ..+..+|-++...+.+ +-+-+-|=|+|.+.|.||-+.|.
T Consensus 34 LRi~v~~~-GCsG~~y~l~l~~~~~~~D~v~e~~gv~v~id~~s~~~l~g~~IDy~~~~~~~~F~f~NP 101 (115)
T PRK13623 34 LRVYITGG-GCSGFQYGFTFDEQVNEDDTTIEKQGVTLVVDPMSLQYLVGAEVDYTEGLEGSRFVIKNP 101 (115)
T ss_pred EEEEEeCC-CCCCcEEEEEECCCCCCCCEEEEcCCEEEEEcHHHHHHhCCCEEEeecCCCcceEEEECC
Confidence 66667766 8888755443322 22 2233344344333322 44556788999999999988654
No 229
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=20.80 E-value=1.9e+02 Score=23.44 Aligned_cols=39 Identities=15% Similarity=0.187 Sum_probs=30.8
Q ss_pred CCCChHHHHHHHHHcCCeEEEEecCCCcccCchhHHHHHHhCCC
Q 012985 381 SPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNL 424 (452)
Q Consensus 381 ~~~s~lp~i~~LL~~girVlIYsGD~D~i~p~~Gt~~wi~~L~w 424 (452)
....+...++.|.++|+++.|.+|.. ....+.+++.+++
T Consensus 25 ~~~~~~~~l~~l~~~g~~i~ivS~~~-----~~~~~~~~~~~~~ 63 (139)
T cd01427 25 LYPGVKEALKELKEKGIKLALATNKS-----RREVLELLEELGL 63 (139)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCch-----HHHHHHHHHHcCC
Confidence 44567788999999999999999877 4555677777776
No 230
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=20.74 E-value=86 Score=29.66 Aligned_cols=24 Identities=38% Similarity=0.800 Sum_probs=18.0
Q ss_pred CCCCCeEEEECC--CCChhhhhhhhhh
Q 012985 117 SSSKPLVLWLNG--GPGCSSLGYGAME 141 (452)
Q Consensus 117 ~~~~Pl~lWlnG--GPGcSS~~~g~~~ 141 (452)
...+|.+|||.| |-|=|.++ .++.
T Consensus 19 ~~~~~~viW~TGLSGsGKSTiA-~ale 44 (197)
T COG0529 19 KGQKGAVIWFTGLSGSGKSTIA-NALE 44 (197)
T ss_pred hCCCCeEEEeecCCCCCHHHHH-HHHH
Confidence 356799999999 77777775 5554
No 231
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=20.29 E-value=65 Score=33.61 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=23.2
Q ss_pred CEEEEeccccccccHHHHHHHHHcCCCCceeeeeeeEEecccccccc
Q 012985 218 DFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNL 264 (452)
Q Consensus 218 ~~yi~GESYgG~yvP~lA~~I~~~n~~~~~inLkGI~IGNg~id~~~ 264 (452)
.+-++||||||--+-+.+..- ..+|..++-+||+-|..
T Consensus 229 ~i~~~GHSFGGATa~~~l~~d---------~r~~~~I~LD~W~~Pl~ 266 (379)
T PF03403_consen 229 RIGLAGHSFGGATALQALRQD---------TRFKAGILLDPWMFPLG 266 (379)
T ss_dssp EEEEEEETHHHHHHHHHHHH----------TT--EEEEES---TTS-
T ss_pred heeeeecCchHHHHHHHHhhc---------cCcceEEEeCCcccCCC
Confidence 599999999997766554432 23677788889888753
No 232
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=20.05 E-value=1.2e+02 Score=30.65 Aligned_cols=44 Identities=18% Similarity=0.174 Sum_probs=32.9
Q ss_pred CCeEEEEecCCCcccCchhHHHHHHhCCCCCCcceeceEeCCeEEEEEe-cCcccc
Q 012985 396 GIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGWWICARV-QGSDIH 450 (452)
Q Consensus 396 girVlIYsGD~D~i~p~~Gt~~wi~~L~w~~~~~w~pW~~~g~~~~~~~-~g~~~~ 450 (452)
.++|||..|+.|.++|....+...+.+. .+.+.+.+-+ .||+++
T Consensus 277 ~~PtLvi~G~~D~~~p~~~~~~~~~~i~-----------p~a~l~~i~~~aGH~~~ 321 (343)
T PRK08775 277 RVPTVVVAVEGDRLVPLADLVELAEGLG-----------PRGSLRVLRSPYGHDAF 321 (343)
T ss_pred CCCeEEEEeCCCEeeCHHHHHHHHHHcC-----------CCCeEEEEeCCccHHHH
Confidence 4799999999999999888888777663 1234555653 788765
Done!