BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012986
(452 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P78789|YC63_SCHPO Uncharacterized protein C1919.03c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC1919.03c PE=1 SV=2
Length = 298
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 11/63 (17%)
Query: 368 IQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRLWSTVLWLYPGTYEIKFIVD 427
I++ G GE+V V GSF+ W +I++ ++S ++ +L L PGT KF+VD
Sbjct: 103 IRWRGGGEVVYVTGSFSRWKKKIQL-----------LKSEDYTVLLQLRPGTQRFKFLVD 151
Query: 428 GQW 430
G W
Sbjct: 152 GIW 154
>sp|Q9R078|AAKB1_MOUSE 5'-AMP-activated protein kinase subunit beta-1 OS=Mus musculus
GN=Prkab1 PE=1 SV=2
Length = 270
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 21/124 (16%)
Query: 337 TEINKAEKLISDKDEELIAAEESLSGLEVVEIQ-------YSGDGEIVEVAGSFNGWHHR 389
+I +E++ + + EE +A + L + Q ++G G+ V ++GSFN W
Sbjct: 44 ADIFHSEEIKAPEKEEFLAWQHDLEANDKAPAQARPTVFRWTGGGKEVYLSGSFNNW--- 100
Query: 390 IKMDPLPSSSIIEPIRSRL-WSTVLWLYPGTYEIKFIVDGQWKVDPQRESVT-KGGICNN 447
S + RS+ + +L L G ++ KF VDGQW DP VT + G NN
Sbjct: 101 ---------SKLPLTRSQNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGTVNN 151
Query: 448 ILRV 451
I++V
Sbjct: 152 IIQV 155
>sp|P80386|AAKB1_RAT 5'-AMP-activated protein kinase subunit beta-1 OS=Rattus norvegicus
GN=Prkab1 PE=1 SV=4
Length = 270
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 21/123 (17%)
Query: 338 EINKAEKLISDKDEELIAAEESLSGLEVVEIQ-------YSGDGEIVEVAGSFNGWHHRI 390
+I E++ + + EE +A + L E Q ++G G+ V ++GSFN W
Sbjct: 45 DIFHTEEMKAPEKEEFLAWQHDLEVNEKAPAQARPTVFRWTGGGKEVYLSGSFNNW---- 100
Query: 391 KMDPLPSSSIIEPIRSRL-WSTVLWLYPGTYEIKFIVDGQWKVDPQRESVT-KGGICNNI 448
S + RS+ + +L L G ++ KF VDGQW DP VT + G NNI
Sbjct: 101 --------SKLPLTRSQNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGTVNNI 152
Query: 449 LRV 451
++V
Sbjct: 153 IQV 155
>sp|O43741|AAKB2_HUMAN 5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens
GN=PRKAB2 PE=1 SV=1
Length = 272
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 13/86 (15%)
Query: 368 IQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRL-WSTVLWLYPGTYEIKFIV 426
I++S G+ V ++GSFN W +I + I+S + +L L G ++ KF V
Sbjct: 81 IRWSEGGKEVFISGSFNNWSTKIPL-----------IKSHNDFVAILDLPEGEHQYKFFV 129
Query: 427 DGQWKVDPQRESVT-KGGICNNILRV 451
DGQW DP VT + G NN++ V
Sbjct: 130 DGQWVHDPSEPVVTSQLGTINNLIHV 155
>sp|Q944A6|SNF4_ARATH Sucrose nonfermenting 4-like protein OS=Arabidopsis thaliana
GN=SNF4 PE=1 SV=1
Length = 487
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 374 GEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRLWSTVLWLYPGTYEIKFIVDGQWKVD 433
G V ++GSF W + M PL + + + L PG ++ KF VDG+W+ D
Sbjct: 31 GRRVFLSGSFTRWTEHVPMSPLEGCPTV-------FQVICNLTPGYHQYKFFVDGEWRHD 83
Query: 434 PQRESVT-KGGICNNIL 449
+ V+ GG+ N I
Sbjct: 84 EHQPFVSGNGGVVNTIF 100
>sp|Q6PAM0|AAKB2_MOUSE 5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus
GN=Prkab2 PE=1 SV=1
Length = 271
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 13/86 (15%)
Query: 368 IQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRL-WSTVLWLYPGTYEIKFIV 426
I++S G+ V ++GSFN W +I + I+S + +L L G ++ KF V
Sbjct: 80 IRWSEGGKEVFISGSFNNWSTKIPL-----------IKSHNDFVAILDLPEGEHQYKFFV 128
Query: 427 DGQWKVDPQRESVT-KGGICNNILRV 451
DGQW DP VT + G NN++ V
Sbjct: 129 DGQWVHDPSEPVVTSQLGTINNLIHV 154
>sp|Q9QZH4|AAKB2_RAT 5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus
GN=Prkab2 PE=1 SV=1
Length = 271
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 13/86 (15%)
Query: 368 IQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRL-WSTVLWLYPGTYEIKFIV 426
I++S G+ V ++GSFN W +I + I+S + +L L G ++ KF V
Sbjct: 80 IRWSEGGKEVFISGSFNNWSTKIPL-----------IKSHNDFVAILDLPEGEHQYKFFV 128
Query: 427 DGQWKVDPQRESVT-KGGICNNILRV 451
DGQW DP VT + G NN++ V
Sbjct: 129 DGQWVHDPSEPVVTSQLGTINNLIHV 154
>sp|Q9Y478|AAKB1_HUMAN 5'-AMP-activated protein kinase subunit beta-1 OS=Homo sapiens
GN=PRKAB1 PE=1 SV=4
Length = 270
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 14/86 (16%)
Query: 368 IQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRL-WSTVLWLYPGTYEIKFIV 426
+++G G+ V ++GSFN W S + RS + +L L G ++ KF V
Sbjct: 82 FRWTGGGKEVYLSGSFNNW------------SKLPLTRSHNNFVAILDLPEGEHQYKFFV 129
Query: 427 DGQWKVDPQRESVT-KGGICNNILRV 451
DGQW DP VT + G NNI++V
Sbjct: 130 DGQWTHDPSEPIVTSQLGTVNNIIQV 155
>sp|Q5R801|AAKB1_PONAB 5'-AMP-activated protein kinase subunit beta-1 OS=Pongo abelii
GN=PRKAB1 PE=2 SV=3
Length = 270
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 14/86 (16%)
Query: 368 IQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRL-WSTVLWLYPGTYEIKFIV 426
+++G G+ V ++GSFN W S + RS + +L L G ++ KF V
Sbjct: 82 FRWTGGGKEVYLSGSFNNW------------SKLPLTRSHNNFVAILDLPEGEHQYKFFV 129
Query: 427 DGQWKVDPQRESVT-KGGICNNILRV 451
DGQW DP VT + G NNI++V
Sbjct: 130 DGQWTHDPSEPIVTSQLGTVNNIIQV 155
>sp|Q5BIS9|AAKB1_BOVIN 5'-AMP-activated protein kinase subunit beta-1 OS=Bos taurus
GN=PRKAB1 PE=2 SV=3
Length = 270
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 14/86 (16%)
Query: 368 IQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRL-WSTVLWLYPGTYEIKFIV 426
+++G G+ V ++GSFN W S + RS + +L L G ++ KF V
Sbjct: 82 FRWTGGGKEVYLSGSFNNW------------SKLPLTRSHNNFVAILDLPEGEHQYKFFV 129
Query: 427 DGQWKVDPQRESVT-KGGICNNILRV 451
DGQW DP VT + G NN+++V
Sbjct: 130 DGQWTHDPSEPVVTSQLGTVNNVIQV 155
>sp|P80387|AAKB1_PIG 5'-AMP-activated protein kinase subunit beta-1 (Fragment) OS=Sus
scrofa GN=PRKAB1 PE=1 SV=1
Length = 122
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 12/85 (14%)
Query: 368 IQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRLWSTVLWLYPGTYEIKFIVD 427
+++G G+ V ++GSFN W PL S + +L L G ++ KF+VD
Sbjct: 47 FRWTGGGKEVYLSGSFNNWSKL----PLTRSH-------NNFVAILDLPEGEHQYKFLVD 95
Query: 428 GQWKVDPQRESVT-KGGICNNILRV 451
GQW DP VT + G NNI++V
Sbjct: 96 GQWTHDPSEPVVTSQLGTVNNIIQV 120
>sp|Q04739|GAL83_YEAST SNF1 protein kinase subunit beta-3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GAL83 PE=1 SV=1
Length = 417
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 366 VEIQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRLWSTVLWLYPGTYEIKFI 425
V+I + G V V GSF GW I + P+P + L L L PGT+ +FI
Sbjct: 164 VDITWQQGGNKVYVTGSFTGWRKMIGLVPVPG-------QPGLMHVKLQLPPGTHRFRFI 216
Query: 426 VDGQWK 431
VD + +
Sbjct: 217 VDNELR 222
>sp|P34164|SIP2_YEAST SNF1 protein kinase subunit beta-2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SIP2 PE=1 SV=3
Length = 415
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 366 VEIQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRLWSTVLWLYPGTYEIKFI 425
VEI++ G V V GSF W I + +P S + + L L PGT+ +FI
Sbjct: 166 VEIRWQQGGSKVYVTGSFTKWRKMIGL--IPDSD-----NNGSFHVKLRLLPGTHRFRFI 218
Query: 426 VDGQWKV 432
VD + +V
Sbjct: 219 VDNELRV 225
>sp|Q9SCY5|KINB2_ARATH SNF1-related protein kinase regulatory subunit beta-2
OS=Arabidopsis thaliana GN=KINB2 PE=1 SV=1
Length = 289
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 12/69 (17%)
Query: 368 IQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRLWSTVLWLYP-GTYEIKFIV 426
I + G+ + V GS++ W R ++ RS T++ + P G YE +FIV
Sbjct: 106 ITWCHGGKEIAVEGSWDNWKTRSRLQ-----------RSGKDFTIMKVLPSGVYEYRFIV 154
Query: 427 DGQWKVDPQ 435
DGQW+ P+
Sbjct: 155 DGQWRHAPE 163
>sp|Q7SFQ9|MRS2_NEUCR Mitochondrial inner membrane magnesium transporter mrs2
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=mrs2 PE=3 SV=1
Length = 547
Score = 37.0 bits (84), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 314 LSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEESLSGLEVVEIQ---Y 370
LS L++ I++EKL + ++ +K V+ + KL+ D EEL+ A++ L+ + + E Y
Sbjct: 317 LSELEDDIDREKLRVLLVLSKRVSTFEQKAKLVRDAIEELLEADDDLASMYLTEKTHDLY 376
Query: 371 SGDGEIVEV 379
G+ + E+
Sbjct: 377 RGEDDHTEI 385
>sp|Q4I298|MRS2_GIBZE Mitochondrial inner membrane magnesium transporter MRS2
OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC
9075 / NRRL 31084) GN=MRS2 PE=3 SV=1
Length = 498
Score = 36.6 bits (83), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 314 LSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEESLSGLEVVEIQ---Y 370
LS L++ I++ KL + ++ +K V+ + KL+ D E+L+ A++ L+ + + E Y
Sbjct: 268 LSELEDDIDRHKLRMLLILSKRVSTFEQKAKLVRDAIEDLLEADDDLADMYLTEKTHDLY 327
Query: 371 SGDGEIVEVAGSFNGWH 387
G+ + EV +H
Sbjct: 328 RGEDDHTEVEMLLESYH 344
>sp|Q6C8H7|LPE10_YARLI Mitochondrial inner membrane magnesium transporter LPE10
OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=LPE10 PE=3 SV=1
Length = 455
Score = 36.2 bits (82), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 314 LSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEESLSGLEVVE 367
LS L++ I++EKL ++Q+K ++ + LI D +EL+ +E L+GL + E
Sbjct: 247 LSELEQDIDREKLRHLLIQSKKLSAFLQKATLIRDVIDELLDTDEDLAGLYLTE 300
>sp|Q7V5U2|ATPB_PROMM ATP synthase subunit beta OS=Prochlorococcus marinus (strain MIT
9313) GN=atpD PE=3 SV=1
Length = 488
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 207 LSDPSFVGEVSPNLNGHYEKADMEEKVANF--IQNGDLDIIEDRAMILNGS 255
LS P FV E+ ++G Y K +EE +A F I +G+LD + ++A L G+
Sbjct: 423 LSQPFFVAEIFTGMSGKYVK--LEETIAGFNMIMSGELDHLPEQAFYLVGN 471
>sp|Q46J68|ATPB_PROMT ATP synthase subunit beta OS=Prochlorococcus marinus (strain
NATL2A) GN=atpD PE=3 SV=1
Length = 488
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 207 LSDPSFVGEVSPNLNGHYEKADMEEKVANFIQNGDLDIIEDRAMILNGS 255
LS P FV E+ ++G Y K + K N I +G+LD + ++A L GS
Sbjct: 423 LSQPFFVAEIFTGMSGKYVKLEDTIKGFNMILSGELDQLPEQAFYLVGS 471
>sp|A2C4I4|ATPB_PROM1 ATP synthase subunit beta OS=Prochlorococcus marinus (strain
NATL1A) GN=atpD PE=3 SV=1
Length = 488
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 207 LSDPSFVGEVSPNLNGHYEKADMEEKVANFIQNGDLDIIEDRAMILNGS 255
LS P FV E+ ++G Y K + K N I +G+LD + ++A L GS
Sbjct: 423 LSQPFFVAEIFTGMSGKYVKLEDTIKGFNMILSGELDQLPEQAFYLVGS 471
>sp|P11048|LMNA_XENLA Lamin-A OS=Xenopus laevis GN=lmna PE=2 SV=1
Length = 665
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 295 ENQLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELI 354
E Q EI + + +LS+L++Q+ + L L+ E + + +L++DKD E+
Sbjct: 283 EAQEEIQQSRIRIDSLSAQLSQLQKQLAAREAKLRDLEDAYARERDSSRRLLADKDREMA 342
Query: 355 AAEESLSG-----LEVVEIQYSGDGEIVEVAGSFNGWHHRIKMDPLPSS 398
+ E+++I+ + D EI G R+++ P P++
Sbjct: 343 EMRARMQQQLDEYQELLDIKLALDMEINAYRKLLEGEEERLRLSPSPNT 391
>sp|Q6EIZ1|K22E_CANFA Keratin, type II cytoskeletal 2 epidermal OS=Canis familiaris
GN=KRT2 PE=2 SV=1
Length = 633
Score = 33.1 bits (74), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 294 RENQLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEEL 353
+E ++EI L M+ + + E++ +K+Q + + A++ + K + A+ +SD +E L
Sbjct: 402 KEVKMEISELNRMIQRLQGEIAHVKKQCKSVQEAIAEAEQKGEHAVKDAQGKLSDLEEAL 461
Query: 354 IAAEESLSGL-----EVVEIQYSGDGEIVEVAGSFNGWHHRIKMD 393
A E L+GL E++ ++ + D EI G R+ D
Sbjct: 462 QQAREDLAGLLRDYQELMNVKLALDVEIATYRKLLEGEECRMSGD 506
>sp|Q74KB1|RNY_LACJO Ribonuclease Y OS=Lactobacillus johnsonii (strain CNCM I-12250 /
La1 / NCC 533) GN=rny PE=3 SV=1
Length = 540
Score = 32.0 bits (71), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 43/69 (62%), Gaps = 12/69 (17%)
Query: 290 EARRRENQL-----EIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEK 344
E R+EN+L IDH +L QK+ +L++ + QI+K LQ + + + N+A++
Sbjct: 103 EVSRQENRLLQREDAIDHKDSLLDQKDSQLTQKENQIKK-------LQAQVLEKENRADQ 155
Query: 345 LISDKDEEL 353
L+++++++L
Sbjct: 156 LVTEREKKL 164
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.128 0.356
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 159,432,201
Number of Sequences: 539616
Number of extensions: 6565055
Number of successful extensions: 45831
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 293
Number of HSP's that attempted gapping in prelim test: 40395
Number of HSP's gapped (non-prelim): 2997
length of query: 452
length of database: 191,569,459
effective HSP length: 121
effective length of query: 331
effective length of database: 126,275,923
effective search space: 41797330513
effective search space used: 41797330513
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)