Query 012986
Match_columns 452
No_of_seqs 142 out of 756
Neff 3.3
Searched_HMMs 29240
Date Mon Mar 25 20:03:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012986.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012986hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nme_A Ptpkis1 protein, SEX4 g 99.9 9.1E-24 3.1E-28 203.3 10.6 119 326-452 123-253 (294)
2 1z0n_A 5'-AMP-activated protei 99.9 2.6E-22 9E-27 166.2 9.9 82 360-452 7-89 (96)
3 2qlv_B Protein SIP2, protein S 99.9 7E-22 2.4E-26 189.2 11.1 84 362-452 2-86 (252)
4 4aee_A Alpha amylase, catalyti 99.5 1.3E-14 4.6E-19 152.7 8.4 79 361-449 15-102 (696)
5 4aef_A Neopullulanase (alpha-a 99.2 1.8E-11 6.1E-16 127.4 8.5 68 363-440 16-84 (645)
6 2z0b_A GDE5, KIAA1434, putativ 98.3 2.1E-06 7.1E-11 74.6 8.3 61 361-426 6-75 (131)
7 3c8d_A Enterochelin esterase; 98.2 2.8E-06 9.6E-11 83.6 9.1 81 361-451 28-149 (403)
8 1ac0_A Glucoamylase; hydrolase 97.9 7.7E-06 2.6E-10 68.0 4.3 75 362-441 5-93 (108)
9 1m7x_A 1,4-alpha-glucan branch 97.6 0.00016 5.4E-09 75.6 9.6 68 364-440 25-100 (617)
10 3k1d_A 1,4-alpha-glucan-branch 97.5 0.00021 7.1E-09 77.2 8.3 69 363-440 135-211 (722)
11 3aml_A OS06G0726400 protein; s 97.3 0.00037 1.3E-08 75.4 7.9 66 364-439 65-144 (755)
12 1cyg_A Cyclodextrin glucanotra 96.2 0.016 5.4E-07 61.1 10.1 74 362-441 578-667 (680)
13 1bf2_A Isoamylase; hydrolase, 96.1 0.0057 1.9E-07 65.7 6.0 56 365-430 17-85 (750)
14 2laa_A Beta/alpha-amylase; SBD 96.1 0.013 4.5E-07 49.9 7.1 66 364-439 5-78 (104)
15 1qho_A Alpha-amylase; glycosid 96.1 0.022 7.6E-07 60.1 10.2 71 362-441 580-673 (686)
16 3vgf_A Malto-oligosyltrehalose 96.0 0.0039 1.3E-07 64.5 4.1 61 365-438 10-73 (558)
17 2vn4_A Glucoamylase; hydrolase 95.9 0.027 9.2E-07 59.7 9.8 73 364-441 497-583 (599)
18 2wsk_A Glycogen debranching en 95.8 0.013 4.4E-07 61.9 7.1 54 365-429 20-77 (657)
19 3bmv_A Cyclomaltodextrin gluca 95.8 0.02 6.8E-07 60.4 8.3 74 362-441 582-670 (683)
20 2bhu_A Maltooligosyltrehalose 95.8 0.008 2.7E-07 63.0 5.2 62 365-440 35-97 (602)
21 2vr5_A Glycogen operon protein 95.6 0.017 5.9E-07 61.7 7.1 55 365-430 30-91 (718)
22 1d3c_A Cyclodextrin glycosyltr 95.6 0.026 8.8E-07 59.6 8.3 74 362-441 585-673 (686)
23 1vem_A Beta-amylase; beta-alph 94.8 0.063 2.2E-06 55.9 8.1 73 361-441 417-506 (516)
24 2e8y_A AMYX protein, pullulana 94.7 0.074 2.5E-06 56.7 8.4 66 365-440 114-186 (718)
25 1wzl_A Alpha-amylase II; pullu 94.3 0.058 2E-06 55.8 6.6 59 364-427 23-87 (585)
26 2fhf_A Pullulanase; multiple d 94.3 0.052 1.8E-06 61.3 6.6 67 365-440 305-385 (1083)
27 1j0h_A Neopullulanase; beta-al 93.1 0.08 2.7E-06 54.8 5.0 61 362-427 21-89 (588)
28 3m07_A Putative alpha amylase; 93.0 0.16 5.3E-06 53.7 7.1 62 365-440 43-107 (618)
29 4aio_A Limit dextrinase; hydro 92.8 0.14 4.9E-06 54.0 6.6 65 365-439 137-215 (884)
30 2wan_A Pullulanase; hydrolase, 92.7 0.15 5.1E-06 56.3 6.7 63 365-438 326-398 (921)
31 1gcy_A Glucan 1,4-alpha-maltot 92.4 0.023 8E-07 58.0 0.0 70 363-440 430-517 (527)
32 3faw_A Reticulocyte binding pr 92.4 0.11 3.7E-06 57.5 5.1 65 366-439 146-224 (877)
33 2ya0_A Putative alkaline amylo 92.2 0.21 7.1E-06 53.3 6.8 65 365-438 25-105 (714)
34 2wan_A Pullulanase; hydrolase, 89.8 0.37 1.3E-05 53.3 6.1 50 373-431 162-221 (921)
35 1ji1_A Alpha-amylase I; beta/a 88.3 0.27 9.3E-06 51.3 3.6 60 364-428 30-96 (637)
36 1ea9_C Cyclomaltodextrinase; h 87.3 0.15 5.2E-06 52.7 1.0 60 363-427 22-86 (583)
37 2ya1_A Putative alkaline amylo 83.3 1.9 6.5E-05 48.3 7.3 63 366-437 333-411 (1014)
38 2c3v_A Alpha-amylase G-6; carb 83.2 2.3 8E-05 36.0 6.2 66 364-438 10-82 (102)
39 4fch_A Outer membrane protein 83.2 0.78 2.7E-05 42.1 3.5 51 373-431 11-63 (221)
40 2eef_A Protein phosphatase 1, 67.5 6.5 0.00022 35.5 5.0 63 373-437 59-132 (156)
41 4fe9_A Outer membrane protein 60.7 7.7 0.00026 38.9 4.6 46 374-427 150-197 (470)
42 2djm_A Glucoamylase A; beta sa 50.1 38 0.0013 28.6 6.5 58 374-434 33-98 (106)
43 4fe9_A Outer membrane protein 43.5 19 0.00064 36.0 4.2 53 374-434 260-319 (470)
44 4dny_A Metalloprotease STCE; m 41.3 27 0.00092 30.9 4.3 25 411-436 98-123 (126)
45 4fem_A Outer membrane protein 39.2 20 0.0007 34.6 3.6 51 374-432 149-201 (358)
46 4ham_A LMO2241 protein; struct 34.5 32 0.0011 28.7 3.6 31 61-91 16-47 (134)
47 3tqn_A Transcriptional regulat 34.2 34 0.0011 27.9 3.6 35 61-95 11-46 (113)
48 3qh9_A Liprin-beta-2; coiled-c 32.2 1.1E+02 0.0036 25.4 6.2 50 298-358 26-75 (81)
49 3tnu_B Keratin, type II cytosk 32.0 1.3E+02 0.0043 25.6 7.0 64 296-359 34-97 (129)
50 2jnz_A PHL P 3 allergen; timot 31.6 84 0.0029 26.8 5.8 57 364-433 28-90 (108)
51 4fch_A Outer membrane protein 28.9 31 0.0011 31.4 2.8 49 375-430 117-169 (221)
52 3tnu_A Keratin, type I cytoske 27.5 1.3E+02 0.0043 25.7 6.2 63 297-359 37-99 (131)
53 3mxz_A Tubulin-specific chaper 27.2 1E+02 0.0036 26.5 5.6 63 298-360 33-104 (116)
54 4aef_A Neopullulanase (alpha-a 26.3 82 0.0028 32.8 5.8 50 364-426 125-178 (645)
55 3neu_A LIN1836 protein; struct 25.5 63 0.0022 26.8 3.9 34 61-94 15-49 (125)
56 2b5u_A Colicin E3; high resolu 25.4 90 0.0031 33.4 5.8 47 310-360 319-365 (551)
57 2eap_A Lymphocyte cytosolic pr 25.1 40 0.0014 28.4 2.5 33 76-108 7-39 (90)
58 2r9f_A Calpain-1 catalytic sub 24.0 40 0.0014 33.2 2.7 25 416-440 120-147 (339)
59 1mhx_A Immunoglobulin-binding 23.8 26 0.00087 27.7 1.1 14 426-439 48-61 (65)
60 1ew4_A CYAY protein; friedreic 21.6 49 0.0017 27.8 2.5 18 418-436 67-84 (106)
61 2nqa_A Calpain 8; calpain, cal 21.5 34 0.0012 33.3 1.7 25 416-440 115-142 (326)
62 4egu_A Histidine triad (HIT) p 20.8 55 0.0019 26.6 2.6 34 77-111 44-77 (119)
No 1
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=99.89 E-value=9.1e-24 Score=203.26 Aligned_cols=119 Identities=24% Similarity=0.351 Sum_probs=102.3
Q ss_pred HHHHHHHHHHhhhcchhhhhcccchHH------HHHHHhh-C--CCceEEEEEEec-CCceEEEEeeeCCCccccccCCC
Q 012986 326 LALSVLQTKAVTEINKAEKLISDKDEE------LIAAEES-L--SGLEVVEIQYSG-DGEIVEVAGSFNGWHHRIKMDPL 395 (452)
Q Consensus 326 ~aLa~~~~k~~~ei~eA~kli~eK~~~------LdaAe~a-L--sgL~~VTF~W~g-~AkeV~IaGSFNnWq~~IpMeKd 395 (452)
.++|||-.+.++.+.+|-+.|.++++- +..+... + -..++|+|+|++ +|++|+|+|+|++|+..++|.++
T Consensus 123 vv~ayLm~~~g~s~~~A~~~v~~~Rp~~Pn~~~l~~~~~~~L~~~~k~~v~f~~~~~~~~~V~v~GsF~~W~~~~~l~k~ 202 (294)
T 3nme_A 123 VALTYMFWVQGYKLMEAHKLLMSKRSCFPKLDAIRNATIDILTGLKRKTVTLTLKDKGFSRVEISGLDIGWGQRIPLTLG 202 (294)
T ss_dssp HHHHHHHHTSCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECSSCSCEEEEETTTEEEEEEECEEC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHhCCCCCChhhhhHHHHHhhhccccccceeeeccCCCCEEEEEEeccCCCCcccceEc
Confidence 688999999999999999999888872 2222222 2 445899999999 59999999999999988999986
Q ss_pred CCCCcccccCCCcEEEEEEeCCceEEEEEEEcCEeeeCCCCCee-cc-CCccceEEEeC
Q 012986 396 PSSSIIEPIRSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRESV-TK-GGICNNILRVI 452 (452)
Q Consensus 396 ~sss~~~~k~sGvFsttL~LPPG~YEYKFIVDGeW~~DPdnPtV-tD-~GnvNNVL~Ve 452 (452)
.+.|.|++++.||||.|+|||+|||+|++||++|.+ .+ .|++||||.|.
T Consensus 203 --------~~~g~~~~~~~L~~G~y~YkFiVDG~w~~d~~~~~~~~d~~G~~nn~~~v~ 253 (294)
T 3nme_A 203 --------KGTGFWILKRELPEGQFEYKYIIDGEWTHNEAEPFIGPNKDGHTNNYAKVV 253 (294)
T ss_dssp --------TTTCEEEEEEEECSEEEEEEEEETTEEECCTTSCEECSCTTSCCEEEEEEC
T ss_pred --------CCCCEEEEEEECCCceEEEEEEECCEEeeCCCCCeeeECCCCCEeEEEEEC
Confidence 247999999999999999999999999999999987 45 79999999984
No 2
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A
Probab=99.87 E-value=2.6e-22 Score=166.22 Aligned_cols=82 Identities=34% Similarity=0.584 Sum_probs=73.8
Q ss_pred CCCceEEEEEEecCCceEEEEeeeCCCccccccCCCCCCCcccccCCCcEEEEEEeCCceEEEEEEEcCEeeeCCCCCee
Q 012986 360 LSGLEVVEIQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRESV 439 (452)
Q Consensus 360 LsgL~~VTF~W~g~AkeV~IaGSFNnWq~~IpMeKd~sss~~~~k~sGvFsttL~LPPG~YEYKFIVDGeW~~DPdnPtV 439 (452)
-...++|+|+|..+|++|+|+|+||+|+ .++|.+ ..|.|++++.|+||.|+|||+|||+|++||.+|++
T Consensus 7 ~~~~~~v~F~wap~a~~V~v~GdFn~W~-~~~m~~----------~~g~w~~~v~l~~G~~~YKf~VdG~~~~DP~~~~~ 75 (96)
T 1z0n_A 7 PAQARPTVFRWTGGGKEVYLSGSFNNWS-KLPMTR----------SQNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIV 75 (96)
T ss_dssp ---CEEEEEEECSCCSCEEEEEGGGTTC-CEECEE----------ETTEEEEEEEECSEEEEEEEEETTEEECCTTSCEE
T ss_pred CCCceEEEEEECCCCcEEEEEEEeCCCc-cccCEE----------CCCEEEEEEEccCCCEEEEEEECCeEEcCCCCCeE
Confidence 4567999999998899999999999999 789986 35899999999999999999999999999999998
Q ss_pred cc-CCccceEEEeC
Q 012986 440 TK-GGICNNILRVI 452 (452)
Q Consensus 440 tD-~GnvNNVL~Ve 452 (452)
.+ .|+.||||.|.
T Consensus 76 ~d~~G~~Nnvi~V~ 89 (96)
T 1z0n_A 76 TSQLGTVNNIIQVK 89 (96)
T ss_dssp ECTTSCEEEEEEEC
T ss_pred ECCCCCEeEEEEEc
Confidence 87 79999999984
No 3
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} SCOP: b.1.18.21 d.353.1.1
Probab=99.86 E-value=7e-22 Score=189.22 Aligned_cols=84 Identities=31% Similarity=0.422 Sum_probs=77.3
Q ss_pred CceEEEEEEecCCceEEEEeeeCCCccccccCCCCCCCcccccCCCcEEEEEEeCCceEEEEEEEcCEeeeCCCCCeecc
Q 012986 362 GLEVVEIQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRESVTK 441 (452)
Q Consensus 362 gL~~VTF~W~g~AkeV~IaGSFNnWq~~IpMeKd~sss~~~~k~sGvFsttL~LPPG~YEYKFIVDGeW~~DPdnPtVtD 441 (452)
.+++|+|+|.++|++|+|+|+|++|++.++|.|.. ...|.|++++.||||.|+|||+|||+|++||.+|++.+
T Consensus 2 ~~vpv~f~W~~~a~~V~V~GsF~~W~~~~~m~k~~-------~~~G~f~~tv~LppG~y~YKFiVDG~w~~Dp~~p~~~d 74 (252)
T 2qlv_B 2 LMVPVEIRWQQGGSKVYVTGSFTKWRKMIGLIPDS-------DNNGSFHVKLRLLPGTHRFRFIVDNELRVSDFLPTATD 74 (252)
T ss_dssp CCEEEEEEECSCCSCEEEEEGGGTTSSCEECEECS-------SSTTCEEEEEEECSEEEEEEEEETTEEECCTTSCEEBC
T ss_pred CcEEEEEEEeCCCcEEEEEEEeCCCcCcccceecc-------CCCCcEEEEEECCCCEEEEEEEECCEEEeCCCCCEEec
Confidence 57899999999999999999999999888999742 25799999999999999999999999999999999887
Q ss_pred -CCccceEEEeC
Q 012986 442 -GGICNNILRVI 452 (452)
Q Consensus 442 -~GnvNNVL~Ve 452 (452)
.|+.||+|.|.
T Consensus 75 ~~G~~nNvi~V~ 86 (252)
T 2qlv_B 75 QMGNFVNYIEVR 86 (252)
T ss_dssp SSCCCEEEEEEC
T ss_pred CCCcCcceeecc
Confidence 79999999984
No 4
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=99.51 E-value=1.3e-14 Score=152.66 Aligned_cols=79 Identities=19% Similarity=0.229 Sum_probs=68.0
Q ss_pred CCceEEEEEEec--CCceEEEEeeeCCCccc-cccCCCCCCCcccccCCCcEEEEEEeCCceEEEEEEEcCEee--eCCC
Q 012986 361 SGLEVVEIQYSG--DGEIVEVAGSFNGWHHR-IKMDPLPSSSIIEPIRSRLWSTVLWLYPGTYEIKFIVDGQWK--VDPQ 435 (452)
Q Consensus 361 sgL~~VTF~W~g--~AkeV~IaGSFNnWq~~-IpMeKd~sss~~~~k~sGvFsttL~LPPG~YEYKFIVDGeW~--~DPd 435 (452)
.+..+|+|+++. +|++|+|+|+||+|++. .+|.+ .+|.|++++.||||.|||||+|||+|+ +||+
T Consensus 15 ~~~~~v~f~~~~~~~~~~v~~~G~Fn~w~~~~~~~~~----------~~~~~~~~~~L~~g~~~y~f~vdg~~~~~~d~~ 84 (696)
T 4aee_A 15 KGRYIVKFTRHWPQYAKNIYLIGEFTSLYPGFVKLRK----------IEEQGIVYLKLWPGEYGYGFQIDNDFENVLDPD 84 (696)
T ss_dssp EEEEEEEEEEECCTTCSCEEEEETTSCSSTTSCBCEE----------ETTEEEEEEEECSEEEEEEEEETTCCSCCCCTT
T ss_pred CCcEEEEEEEECCCCCcEEEEEEecCCCCCCCcceEe----------cCCeEEEEEEcCCceEEEEEEECCEEeecCCCC
Confidence 355789999987 59999999999999764 77875 489999999999999999999999999 8899
Q ss_pred CCeec---c-CCccceEE
Q 012986 436 RESVT---K-GGICNNIL 449 (452)
Q Consensus 436 nPtVt---D-~GnvNNVL 449 (452)
+|... + .|..|+|.
T Consensus 85 ~~~~~y~~~~~g~~n~~~ 102 (696)
T 4aee_A 85 NEEKKCVHTSFFPEYKKC 102 (696)
T ss_dssp CCCEEEEECSSCTTSEEE
T ss_pred CCcccccccCCcccccee
Confidence 88644 3 58899885
No 5
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=99.21 E-value=1.8e-11 Score=127.44 Aligned_cols=68 Identities=22% Similarity=0.506 Sum_probs=60.6
Q ss_pred ceEEEEEEecCCceEEEEeeeCCCccc-cccCCCCCCCcccccCCCcEEEEEEeCCceEEEEEEEcCEeeeCCCCCeec
Q 012986 363 LEVVEIQYSGDGEIVEVAGSFNGWHHR-IKMDPLPSSSIIEPIRSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRESVT 440 (452)
Q Consensus 363 L~~VTF~W~g~AkeV~IaGSFNnWq~~-IpMeKd~sss~~~~k~sGvFsttL~LPPG~YEYKFIVDGeW~~DPdnPtVt 440 (452)
...|.|.++..|+.|+|+|+||+|.+. .+|++ .+|.|.+++.||||.|+|||+|||+|..||.+|...
T Consensus 16 ~~~~~~~~~~~~~~~yl~G~Fn~w~~~~~~m~~----------~g~~~~~~v~L~~G~y~Y~f~vdg~~~~dp~n~~~~ 84 (645)
T 4aef_A 16 VAEVEFSLIREGSYAYLLGDFNAFNEGSFRMEQ----------EGKNWKIKIALPEGVWHYAFSIDGKFVLDPDNPERR 84 (645)
T ss_dssp EEEEEEEEECCSSCEEEEETTTTTCTTSSEEEE----------CSSEEEEEEEECSEEEEEEEEETTEEECCTTCCCEE
T ss_pred EEEEEEecCCCCeEEEEEEcCCCCCCCcccceE----------cCCEEEEEEEeCCceEEEEEEECCeEecCCCCCCcc
Confidence 467888999989999999999999874 67875 568999999999999999999999999999998654
No 6
>2z0b_A GDE5, KIAA1434, putative glycerophosphodiester phosphodiesterase; CBM20 domain, starch-binding, hydrolase, STR genomics, NPPSFA; 2.00A {Homo sapiens}
Probab=98.28 E-value=2.1e-06 Score=74.65 Aligned_cols=61 Identities=25% Similarity=0.539 Sum_probs=48.8
Q ss_pred CCceEEEEEEec---CCceEEEEee---eCCCccc--cccCCCCCCCcccccCCCcEEEEEEeCCc-eEEEEEEE
Q 012986 361 SGLEVVEIQYSG---DGEIVEVAGS---FNGWHHR--IKMDPLPSSSIIEPIRSRLWSTVLWLYPG-TYEIKFIV 426 (452)
Q Consensus 361 sgL~~VTF~W~g---~AkeV~IaGS---FNnWq~~--IpMeKd~sss~~~~k~sGvFsttL~LPPG-~YEYKFIV 426 (452)
.....|+|+... .++.|+|+|+ +.+|++. ++|....- ......|.+++.||+| .+||||++
T Consensus 6 ~~~v~V~F~v~~~~~~ge~v~vvGs~~~LG~W~p~~av~L~~~~~-----~~~~~~W~~~v~lp~~~~~eYKyvi 75 (131)
T 2z0b_A 6 SGPSQVAFEIRGTLLPGEVFAICGSCDALGNWNPQNAVALLPEND-----TGESMLWKATIVLSRGVSVQYRYFK 75 (131)
T ss_dssp CCCEEEEEEEECCCCTTCEEEEEESSGGGTTTCGGGCEECEECCT-----TCCSSEEEEEEEECTTCCEEEEEEE
T ss_pred CCeEEEEEEEeeecCCCCEEEEEeCCCcCCCCCcccccccccccc-----CCCCCeEEEEEEcCCCCcEEEEEEE
Confidence 345789999875 3899999999 8899974 68876310 0157899999999998 59999999
No 7
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=98.23 E-value=2.8e-06 Score=83.61 Aligned_cols=81 Identities=21% Similarity=0.206 Sum_probs=64.8
Q ss_pred CCceEEEEEEecC-C-------ceEEEEeeeCCCcc------ccccCCCCCCCcccccCCCcEEEEEEeCCceE-EEEEE
Q 012986 361 SGLEVVEIQYSGD-G-------EIVEVAGSFNGWHH------RIKMDPLPSSSIIEPIRSRLWSTVLWLYPGTY-EIKFI 425 (452)
Q Consensus 361 sgL~~VTF~W~g~-A-------keV~IaGSFNnWq~------~IpMeKd~sss~~~~k~sGvFsttL~LPPG~Y-EYKFI 425 (452)
.+...|||.|.++ | ++|+|. +++|+. ..+|+|. .+.|+|+.++.||+|-| .|.|+
T Consensus 28 ~~~~~vtF~~~~p~a~~~~~~~~~V~~~--~~~~~d~~~~~~~~~m~r~--------~~~~~W~~t~~l~~~~~~~Y~~~ 97 (403)
T 3c8d_A 28 DEMFEVTFWWRDPQGSEEYSTIKRVWVY--ITGVTDHHQNSQPQSMQRI--------AGTDVWQWTTQLNANWRGSYCFI 97 (403)
T ss_dssp SSEEEEEEEEECTTCSTTTCCCCEEEEE--ETTTC-------CCBCEEC--------TTSSEEEEEEEEETTCEEEEEEE
T ss_pred CCcEEEEEEeeCCCcccccCccceEEEE--CcCCCccccccCccccccC--------CCCCeEEEEEEECCCcEEEEEEE
Confidence 4568999999987 5 799998 344432 2468874 37899999999999999 99999
Q ss_pred Ec------------------------CEeeeCCCCCeecc-C-CccceEEEe
Q 012986 426 VD------------------------GQWKVDPQRESVTK-G-GICNNILRV 451 (452)
Q Consensus 426 VD------------------------GeW~~DPdnPtVtD-~-GnvNNVL~V 451 (452)
|| |..+.||.+|.... . |...|+|.|
T Consensus 98 ~~~~~~~~~~~~~~~~~~r~~w~~~~~~~~~DP~n~~~~~~~~~~~~s~~~~ 149 (403)
T 3c8d_A 98 PTERDDIFSAPSPDRLELREGWRKLLPQAIADPLNPQSWKGGLGHAVSALEM 149 (403)
T ss_dssp EESCCSTTCCC--CHHHHHHHHHHHGGGCBCCTTCSSEECCSSSSCEEEEEC
T ss_pred ecCcccccccccchHHHHHHHHHHhhcccccCCCCCCCCCCCCCcccccccC
Confidence 99 77889999998764 3 777788875
No 8
>1ac0_A Glucoamylase; hydrolase, starch binding domain; HET: GLC BGC GLO; NMR {Aspergillus niger} SCOP: b.3.1.1 PDB: 1acz_A* 1kul_A 1kum_A
Probab=97.90 E-value=7.7e-06 Score=67.97 Aligned_cols=75 Identities=27% Similarity=0.484 Sum_probs=55.9
Q ss_pred CceEEEEEEec---CCceEEEEeeeC---CCccc--cccCCCCCCCcccccCCCcEEEEEEeCCc-eEEEEEEEc---C-
Q 012986 362 GLEVVEIQYSG---DGEIVEVAGSFN---GWHHR--IKMDPLPSSSIIEPIRSRLWSTVLWLYPG-TYEIKFIVD---G- 428 (452)
Q Consensus 362 gL~~VTF~W~g---~AkeV~IaGSFN---nWq~~--IpMeKd~sss~~~~k~sGvFsttL~LPPG-~YEYKFIVD---G- 428 (452)
+...|+|.... .|+.|+|+|+.. +|++. ++|....- ..+.+.|.+++.||+| .+||||+|. |
T Consensus 5 ~~v~V~F~v~~~t~~Ge~v~vvGs~~~LG~W~~~~a~~l~~~~~-----~~~~~~W~~~v~lp~~~~~eYKy~v~~~~g~ 79 (108)
T 1ac0_A 5 TAVAVTFDLTATTTYGENIYLVGSISQLGDWETSDGIALSADKY-----TSSDPLWYVTVTLPAGESFEYKFIRIESDDS 79 (108)
T ss_dssp CCCCEEEEEECCCCSSCCEECCCSSSTTCSSSGGGSCCBBCSSS-----SSSCSSCEEEECCCSSSCEECCCEECCSSSC
T ss_pred CeEEEEEEEeeECCCCCEEEEEeCcHHHCCCCHHHCcccccccc-----CCcCCeEEEEEEeCCCCeEEEEEEEEcCCCC
Confidence 45678888775 389999999864 89964 68876310 0145899999999999 599999993 4
Q ss_pred -EeeeCCCCCeecc
Q 012986 429 -QWKVDPQRESVTK 441 (452)
Q Consensus 429 -eW~~DPdnPtVtD 441 (452)
.|-.+|+.-...+
T Consensus 80 ~~WE~g~nR~~~~p 93 (108)
T 1ac0_A 80 VEWESDPNREYTVP 93 (108)
T ss_dssp CCCCCSSCCEECCC
T ss_pred EEeccCCCEEEECC
Confidence 4888887765554
No 9
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=97.61 E-value=0.00016 Score=75.63 Aligned_cols=68 Identities=24% Similarity=0.329 Sum_probs=53.6
Q ss_pred eEEEEEEecC-CceEEEEeeeCCCcc-ccccCCCCCCCcccccCCCcEEEEEE-eCCceEEEEEEE---cCEe--eeCCC
Q 012986 364 EVVEIQYSGD-GEIVEVAGSFNGWHH-RIKMDPLPSSSIIEPIRSRLWSTVLW-LYPGTYEIKFIV---DGQW--KVDPQ 435 (452)
Q Consensus 364 ~~VTF~W~g~-AkeV~IaGSFNnWq~-~IpMeKd~sss~~~~k~sGvFsttL~-LPPG~YEYKFIV---DGeW--~~DPd 435 (452)
..|+|+..++ |++|.|.|+|++|.. .++|.+. ...|+|++.+. +++|.+ |+|.| ||.+ +.||-
T Consensus 25 ~gv~F~vwAP~A~~V~L~gdfn~~~~~~~~M~~~--------~~~GvW~~~v~~~~~g~~-Y~f~i~~~~g~~~~~~DPy 95 (617)
T 1m7x_A 25 TGTRFSVWAPNARRVSVVGQFNYWDGRRHPMRLR--------KESGIWELFIPGAHNGQL-YKYEMIDANGNLRLKSDPY 95 (617)
T ss_dssp EEEEEEEECSSCSCEEEEEGGGTSCTTTCBCCCC--------TTTTEEEEEEETCCTTCE-EEEEEECTTSCEEEECCTT
T ss_pred CcEEEEEECCCCCEEEEEEEeCCCCCceeEeEEC--------CCCCEEEEEEcCCCCCCE-EEEEEEcCCCcEEEecCcc
Confidence 5789986665 999999999999975 4789863 25799999997 788875 99999 6775 57877
Q ss_pred CCeec
Q 012986 436 RESVT 440 (452)
Q Consensus 436 nPtVt 440 (452)
...+.
T Consensus 96 a~~~~ 100 (617)
T 1m7x_A 96 AFEAQ 100 (617)
T ss_dssp CSSEE
T ss_pred ceeec
Confidence 65544
No 10
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=97.46 E-value=0.00021 Score=77.24 Aligned_cols=69 Identities=26% Similarity=0.325 Sum_probs=53.8
Q ss_pred ceEEEEEEecC-CceEEEEeeeCCCccc-cccCCCCCCCcccccCCCcEEEEEE-eCCceEEEEEEE---cCEe--eeCC
Q 012986 363 LEVVEIQYSGD-GEIVEVAGSFNGWHHR-IKMDPLPSSSIIEPIRSRLWSTVLW-LYPGTYEIKFIV---DGQW--KVDP 434 (452)
Q Consensus 363 L~~VTF~W~g~-AkeV~IaGSFNnWq~~-IpMeKd~sss~~~~k~sGvFsttL~-LPPG~YEYKFIV---DGeW--~~DP 434 (452)
..-|+|+..+| |+.|.|+|+||+|... .+|.+. ...|+|++.+. +.+|. .|||.| ||+| +.||
T Consensus 135 ~~g~~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~--------~~~GvW~~~i~~~~~g~-~Y~y~i~~~~g~~~~~~DP 205 (722)
T 3k1d_A 135 VSGVSFAVWAPNAKGVSLIGEFNGWNGHEAPMRVL--------GPSGVWELFWPDFPCDG-LYKFRVHGADGVVTDRADP 205 (722)
T ss_dssp EEEEEEEEECTTCSEEEEEEGGGTTCCCSCBCEEC--------GGGCEEEEEEETCCTTC-EEEEEEECTTSCEEEECCT
T ss_pred CceEEEEEECCCCCEEEEEeecCCCCCCcccCEEc--------CCCCEEEEEeCCCCCCC-EEEEEEEcCCCcEEEeecc
Confidence 45689986666 9999999999999864 789864 25699999997 88885 588888 5765 6788
Q ss_pred CCCeec
Q 012986 435 QRESVT 440 (452)
Q Consensus 435 dnPtVt 440 (452)
-...+.
T Consensus 206 ya~~~~ 211 (722)
T 3k1d_A 206 FAFGTE 211 (722)
T ss_dssp TCSSBC
T ss_pred cceeec
Confidence 776554
No 11
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=97.30 E-value=0.00037 Score=75.37 Aligned_cols=66 Identities=18% Similarity=0.366 Sum_probs=50.8
Q ss_pred eEEEEEEecC-CceEEEEeeeCCCccc-cccCCCCCCCcccccCCCcEEEEEE-------eCCceEEEEEEEc---CEe-
Q 012986 364 EVVEIQYSGD-GEIVEVAGSFNGWHHR-IKMDPLPSSSIIEPIRSRLWSTVLW-------LYPGTYEIKFIVD---GQW- 430 (452)
Q Consensus 364 ~~VTF~W~g~-AkeV~IaGSFNnWq~~-IpMeKd~sss~~~~k~sGvFsttL~-------LPPG~YEYKFIVD---GeW- 430 (452)
..|+|+..+| |+.|.|+|+|++|... ++|.+. ..|+|++.+. +++|.+ |||.|+ |.|
T Consensus 65 ~gv~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~---------~~GvW~~~v~~~~g~~~i~~g~~-Y~y~i~~~~g~~~ 134 (755)
T 3aml_A 65 GATIYREWAPAAQEAQLIGEFNNWNGAKHKMEKD---------KFGIWSIKISHVNGKPAIPHNSK-VKFRFRHGGGAWV 134 (755)
T ss_dssp TEEEEEEECTTCSEEEEEEGGGTTCCTTCBCEEC---------TTSEEEEEEECBTTBCSSCTTEE-EEEEEECTTCCCE
T ss_pred CeEEEEEECCCCCEEEEEEecCCCCCceeeceeC---------CCCEEEEEEcccccccCCCCCCE-EEEEEECCCCcEE
Confidence 3588986655 9999999999999764 889863 6799999998 788875 888886 455
Q ss_pred -eeCCCCCee
Q 012986 431 -KVDPQRESV 439 (452)
Q Consensus 431 -~~DPdnPtV 439 (452)
+.||-...+
T Consensus 135 ~~~dpya~~~ 144 (755)
T 3aml_A 135 DRIPAWIRYA 144 (755)
T ss_dssp EECCTTCSCE
T ss_pred ecCCcchheE
Confidence 347755443
No 12
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=96.25 E-value=0.016 Score=61.13 Aligned_cols=74 Identities=22% Similarity=0.316 Sum_probs=55.4
Q ss_pred CceEEEEEEec----CCceEEEEeeeC---CCccc--c-ccCCCCCCCcccccCCCcEEEEEEeCCc-eEEEEEEE---c
Q 012986 362 GLEVVEIQYSG----DGEIVEVAGSFN---GWHHR--I-KMDPLPSSSIIEPIRSRLWSTVLWLYPG-TYEIKFIV---D 427 (452)
Q Consensus 362 gL~~VTF~W~g----~AkeV~IaGSFN---nWq~~--I-pMeKd~sss~~~~k~sGvFsttL~LPPG-~YEYKFIV---D 427 (452)
+...|+|+... .++.|+|+|+-. +|++. + +|.... ......|.+++.||+| .+||||++ +
T Consensus 578 ~~v~v~f~v~~~~~~~ge~v~v~G~~~~LG~W~~~~a~~~l~~~~------~~~~~~W~~~v~lp~~~~~eyK~v~~~~~ 651 (680)
T 1cyg_A 578 DQVSVRFVVNNATTNLGQNIYIVGNVYELGNWDTSKAIGPMFNQV------VYSYPTWYIDVSVPEGKTIEFKFIKKDSQ 651 (680)
T ss_dssp CEEEEEEEEESCCCCSSCEEEEEESSGGGBTTCGGGCBCCCBCSS------SSCTTCEEEEEEEESSCEEEEEEEEECTT
T ss_pred CeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccc------CCCCCcEEEEEEeCCCCcEEEEEEEEeCC
Confidence 45789998865 389999999987 89975 5 676510 0256899999999988 79999998 3
Q ss_pred C--EeeeCCCCCeecc
Q 012986 428 G--QWKVDPQRESVTK 441 (452)
Q Consensus 428 G--eW~~DPdnPtVtD 441 (452)
| .|-..|+.-....
T Consensus 652 ~~~~WE~g~Nr~~~~~ 667 (680)
T 1cyg_A 652 GNVTWESGSNHVYTTP 667 (680)
T ss_dssp SCEEECCSSCEEEECC
T ss_pred CCeEeCCCCCeeEECC
Confidence 4 3777766655444
No 13
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=96.11 E-value=0.0057 Score=65.75 Aligned_cols=56 Identities=9% Similarity=0.095 Sum_probs=44.6
Q ss_pred EEEEEEecC-CceEEEEeeeCCCcc-----ccccCCCCCCCcccccCCCcEEEEEE-eC------CceEEEEEEEcCEe
Q 012986 365 VVEIQYSGD-GEIVEVAGSFNGWHH-----RIKMDPLPSSSIIEPIRSRLWSTVLW-LY------PGTYEIKFIVDGQW 430 (452)
Q Consensus 365 ~VTF~W~g~-AkeV~IaGSFNnWq~-----~IpMeKd~sss~~~~k~sGvFsttL~-LP------PG~YEYKFIVDGeW 430 (452)
.|+|+..++ |+.|.|.+ |++|.. .++|.+. ..|+|++.+. +. +|.|.|+|.|+|.|
T Consensus 17 ~~~F~vwap~A~~V~l~l-~~~~~~~~~~~~~~m~~~---------~~gvW~~~v~~~~~~~~~~~g~y~Y~y~v~g~~ 85 (750)
T 1bf2_A 17 NITFRVYSSQATRIVLYL-YSAGYGVQESATYTLSPA---------GSGVWAVTVPVSSIKAAGITGAVYYGYRAWGPN 85 (750)
T ss_dssp EEEEEEECSSCSEEEEEE-ESSSSSCCCSEEEECEEC---------STTEEEEEEEHHHHHHTTCCSCCEEEEEEEBTT
T ss_pred EEEEEEECCCCCEEEEEE-EccCCCCccceEEecccC---------CCCEEEEEECCcccccccCCCCEEEEEEEEeee
Confidence 388986665 99999998 987652 4778763 5699999986 66 89999999999753
No 14
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A
Probab=96.10 E-value=0.013 Score=49.91 Aligned_cols=66 Identities=18% Similarity=0.244 Sum_probs=51.5
Q ss_pred eEEEEEEecCCceEEEEeeeC--CCccc--cccCCCCCCCcccccCCCcE-EEEEEeCCc-eEEEEEEEcCE--eeeCCC
Q 012986 364 EVVEIQYSGDGEIVEVAGSFN--GWHHR--IKMDPLPSSSIIEPIRSRLW-STVLWLYPG-TYEIKFIVDGQ--WKVDPQ 435 (452)
Q Consensus 364 ~~VTF~W~g~AkeV~IaGSFN--nWq~~--IpMeKd~sss~~~~k~sGvF-sttL~LPPG-~YEYKFIVDGe--W~~DPd 435 (452)
..|+|.|..++++|+|-..+. +|++. ++|.+. .-.+ | .+++.||.| .++|+|. ||. |-.++.
T Consensus 5 ~~vtiyY~~g~~~vylHyg~~~g~Wt~~~~v~M~~~--------~~~g-w~~~TI~l~~g~~~~~~F~-dG~~~WDNn~g 74 (104)
T 2laa_A 5 NKVTIYYKKGFNSPYIHYRPAGGSWTAAPGVKMQDA--------EISG-YAKITVDIGSASQLEAAFN-DGNNNWDSNNT 74 (104)
T ss_dssp CEEEEEEECSSSSCEEEEEETTSCCCSSSCEECEEE--------TTTT-EEEEEEECTTCSCEEEEEE-CSSSCEESTTT
T ss_pred CEEEEEEcCCCCcEEEEEcCCCCCCCcCCccccccc--------cCCC-eEEEEEECCCCCEEEEEEe-CCCCcCcCCCC
Confidence 578899998899999999985 79874 688753 1134 6 699999976 8999995 874 998877
Q ss_pred CCee
Q 012986 436 RESV 439 (452)
Q Consensus 436 nPtV 439 (452)
.-+.
T Consensus 75 ~Nyt 78 (104)
T 2laa_A 75 KNYS 78 (104)
T ss_dssp SCEE
T ss_pred ccEE
Confidence 6543
No 15
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=96.08 E-value=0.022 Score=60.10 Aligned_cols=71 Identities=21% Similarity=0.371 Sum_probs=54.3
Q ss_pred CceEEEEEEec-----CCceEEEEeeeC---CCcc--------cc-ccCCCCCCCcccccCCCcEEEEEEeCCc-eEEEE
Q 012986 362 GLEVVEIQYSG-----DGEIVEVAGSFN---GWHH--------RI-KMDPLPSSSIIEPIRSRLWSTVLWLYPG-TYEIK 423 (452)
Q Consensus 362 gL~~VTF~W~g-----~AkeV~IaGSFN---nWq~--------~I-pMeKd~sss~~~~k~sGvFsttL~LPPG-~YEYK 423 (452)
....|+|+... .|+.|+|+|+.. +|.+ .+ +|.. .....|++++.||+| .+|||
T Consensus 580 ~~v~v~F~v~~~~t~~~G~~l~v~G~~~~LG~W~~~~~~~~~~a~~~l~~---------~~~~~W~~~v~l~~~~~~eyK 650 (686)
T 1qho_A 580 TQTSVVFTVKSAPPTNLGDKIYLTGNIPELGNWSTDTSGAVNNAQGPLLA---------PNYPDWFYVFSVPAGKTIQFK 650 (686)
T ss_dssp SEEEEEEEEESCCCCCTTCEEEEEESSGGGTTTCCCCSSCSSCCBCCCBC---------TTTTSEEEEEEEETTCEEEEE
T ss_pred CeEEEEEEEecccCCCCCCEEEEEeChHHhCCCCCccccchhhhhccccc---------CCCCcEEEEEEeCCCCeEEEE
Confidence 35678888764 478999999986 7987 34 6664 256899999999999 59999
Q ss_pred EEE---cC--EeeeCCCCCeecc
Q 012986 424 FIV---DG--QWKVDPQRESVTK 441 (452)
Q Consensus 424 FIV---DG--eW~~DPdnPtVtD 441 (452)
|+| +| .|-..|+.-...+
T Consensus 651 y~~~~~~~~~~We~~~nr~~~~~ 673 (686)
T 1qho_A 651 FFIKRADGTIQWENGSNHVATTP 673 (686)
T ss_dssp EEEECTTSCEEECCSSCEEEECC
T ss_pred EEEEcCCCCEEeCCCCCeeEECC
Confidence 999 34 4877777655554
No 16
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=96.02 E-value=0.0039 Score=64.46 Aligned_cols=61 Identities=13% Similarity=0.069 Sum_probs=50.6
Q ss_pred EEEEEEecC-CceEEEEeeeCCCccccccCCCCCCCcccccCCCcEEEEEE-eCCceEEEEEEEcCE-eeeCCCCCe
Q 012986 365 VVEIQYSGD-GEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRLWSTVLW-LYPGTYEIKFIVDGQ-WKVDPQRES 438 (452)
Q Consensus 365 ~VTF~W~g~-AkeV~IaGSFNnWq~~IpMeKd~sss~~~~k~sGvFsttL~-LPPG~YEYKFIVDGe-W~~DPdnPt 438 (452)
.|+|+..+| |+.|.|.|.|+ ..++|.+. ..|+|++.+. +.+|. .|+|.|||. .+.||-...
T Consensus 10 ~~~f~vwap~a~~v~l~~~~~---~~~~m~~~---------~~g~w~~~~~~~~~g~-~Y~~~~~~~~~~~DP~~~~ 73 (558)
T 3vgf_A 10 EVIFTLWAPYQKSVKLKVLEK---GLYEMERD---------EKGYFTITLNNVKVRD-RYKYVLDDASEIPDPASRY 73 (558)
T ss_dssp EEEEEEECTTCSCCEEEETTT---EEEECEEC---------TTCEEEEEESSCCTTC-EEEEECTTSCEECCTTCSC
T ss_pred cEEEEEECCCCCEEEEEEecC---ceeecccC---------CCCEEEEEECCCCCCC-EEEEEEeCCccccCcchhh
Confidence 588987665 99999999987 46899874 5799999996 88995 699999997 788987653
No 17
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=95.88 E-value=0.027 Score=59.66 Aligned_cols=73 Identities=27% Similarity=0.474 Sum_probs=53.4
Q ss_pred eEEEEEEec---CCceEEEEeeeC---CCccc--cccCCCCCCCcccccCCCcEEEEEEeCCc-eEEEEEEE---cC--E
Q 012986 364 EVVEIQYSG---DGEIVEVAGSFN---GWHHR--IKMDPLPSSSIIEPIRSRLWSTVLWLYPG-TYEIKFIV---DG--Q 429 (452)
Q Consensus 364 ~~VTF~W~g---~AkeV~IaGSFN---nWq~~--IpMeKd~sss~~~~k~sGvFsttL~LPPG-~YEYKFIV---DG--e 429 (452)
..|+|+... .|+.|+|+|+-. +|++. ++|....- ..++..|++++.||+| .+||||+| +| .
T Consensus 497 v~v~F~v~~~t~~Ge~l~vvGs~~~LG~W~~~~a~~L~~~~~-----t~~~~~W~~~v~lp~~~~~eYKyvv~~~~g~~~ 571 (599)
T 2vn4_A 497 VAVTFHELVSTQFGQTVKVAGNAAALGNWSTSAAVALDAVNY-----ADNHPLWIGTVNLEAGDVVEYKYINVGQDGSVT 571 (599)
T ss_dssp EEEEEEEECCCCTTCEEEEEESSGGGTTTCTTTSEECBCTTC-----BTTBCEEEEEEEEETTCEEEEEEEEECTTCCEE
T ss_pred EEEEEEEeEEcCCCCEEEEEecccCCCCcChhheeecccccC-----CCCCCcEEEEEEcCCCCcEEEEEEEECCCCceE
Confidence 568888775 389999999886 89864 78876310 0124799999999998 59999999 33 3
Q ss_pred eeeCCCCCeecc
Q 012986 430 WKVDPQRESVTK 441 (452)
Q Consensus 430 W~~DPdnPtVtD 441 (452)
|-..|+.-...+
T Consensus 572 WE~g~NR~~~~p 583 (599)
T 2vn4_A 572 WESDPNHTYTVP 583 (599)
T ss_dssp ECCSSCEEEECC
T ss_pred eCCCCCEEEecC
Confidence 777766655444
No 18
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=95.83 E-value=0.013 Score=61.94 Aligned_cols=54 Identities=24% Similarity=0.330 Sum_probs=43.6
Q ss_pred EEEEEEecC-CceEEEEeeeCCCc--cccccCCCCCCCcccccCCCcEEEEEE-eCCceEEEEEEEcCE
Q 012986 365 VVEIQYSGD-GEIVEVAGSFNGWH--HRIKMDPLPSSSIIEPIRSRLWSTVLW-LYPGTYEIKFIVDGQ 429 (452)
Q Consensus 365 ~VTF~W~g~-AkeV~IaGSFNnWq--~~IpMeKd~sss~~~~k~sGvFsttL~-LPPG~YEYKFIVDGe 429 (452)
.|+|+..++ |+.|.|.+ |+++. ..++|.+ ...|+|++.+. +.+|.+ |+|.|+|.
T Consensus 20 g~~F~vwap~A~~V~l~~-f~~~~~~~~~~m~~---------~~~g~w~~~v~~~~~g~~-Y~y~v~~~ 77 (657)
T 2wsk_A 20 GVNFTLFSAHAERVELCV-FDANGQEHRYDLPG---------HSGDIWHGYLPDARPGLR-YGYRVHGP 77 (657)
T ss_dssp EEEEEEECSSCSEEEEEE-ECTTCCEEEEECCE---------EETTEEEEEEETCCTTCE-EEEEEECC
T ss_pred eEEEEEECCCCCEEEEEE-ECCCCCEEEEeCcC---------CCCCEEEEEECCCCCCCE-EEEEEeee
Confidence 588986665 99999999 98765 3588986 36799999885 788987 99999983
No 19
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=95.78 E-value=0.02 Score=60.43 Aligned_cols=74 Identities=20% Similarity=0.288 Sum_probs=53.8
Q ss_pred CceEEEEEEec----CCceEEEEeeeC---CCccc--c-ccCCCCCCCcccccCCCcEEEEEEeCCc-eEEEEEEEcC--
Q 012986 362 GLEVVEIQYSG----DGEIVEVAGSFN---GWHHR--I-KMDPLPSSSIIEPIRSRLWSTVLWLYPG-TYEIKFIVDG-- 428 (452)
Q Consensus 362 gL~~VTF~W~g----~AkeV~IaGSFN---nWq~~--I-pMeKd~sss~~~~k~sGvFsttL~LPPG-~YEYKFIVDG-- 428 (452)
....|+|+... .++.|+|+|+.. +|++. + +|.... ......|.+++.||+| .+||||++=.
T Consensus 582 ~~v~v~f~v~~~~~~~g~~v~v~G~~~~LG~W~~~~a~~~l~~~~------~~~~~~W~~~v~lp~~~~~eyK~~~~~~~ 655 (683)
T 3bmv_A 582 NQICVRFVVNNASTVYGENVYLTGNVAELGNWDTSKAIGPMFNQV------VYQYPTWYYDVSVPAGTTIQFKFIKKNGN 655 (683)
T ss_dssp SEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCGGGCBCSCBCSS------SSCTTSEEEEEEEETTCEEEEEEEEESSS
T ss_pred CeEEEEEEEEeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccC------CCCCCcEEEEEEeCCCCcEEEEEEEEcCC
Confidence 35789998865 389999999997 89974 5 676510 0156899999999998 7999999832
Q ss_pred --EeeeCCCCCeecc
Q 012986 429 --QWKVDPQRESVTK 441 (452)
Q Consensus 429 --eW~~DPdnPtVtD 441 (452)
.|-..|+.-+..+
T Consensus 656 ~~~WE~g~Nr~~~~~ 670 (683)
T 3bmv_A 656 TITWEGGSNHTYTVP 670 (683)
T ss_dssp CCEECCSSCEEEECC
T ss_pred ceEecCCCCeeEECC
Confidence 3666655544443
No 20
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=95.76 E-value=0.008 Score=62.95 Aligned_cols=62 Identities=19% Similarity=0.187 Sum_probs=49.5
Q ss_pred EEEEEEecC-CceEEEEeeeCCCccccccCCCCCCCcccccCCCcEEEEEEeCCceEEEEEEEcCEeeeCCCCCeec
Q 012986 365 VVEIQYSGD-GEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRESVT 440 (452)
Q Consensus 365 ~VTF~W~g~-AkeV~IaGSFNnWq~~IpMeKd~sss~~~~k~sGvFsttL~LPPG~YEYKFIVDGeW~~DPdnPtVt 440 (452)
.|+|+..++ |+.|.|.|. + ..++|.+. ..|+|++.+.+.+|.+ |+|.|||..+.||-...+.
T Consensus 35 ~~~f~vwap~a~~v~l~~~---~-~~~~m~~~---------~~g~w~~~~~~~~g~~-Y~~~v~g~~~~DPya~~~~ 97 (602)
T 2bhu_A 35 GTRFRLWTSTARTVAVRVN---G-TEHVMTSL---------GGGIYELELPVGPGAR-YLFVLDGVPTPDPYARFLP 97 (602)
T ss_dssp CEEEEEECSSCSSEEEEET---T-EEEECEEE---------ETTEEEEEESCCTTCE-EEEEETTEEECCTTCSCCT
T ss_pred eEEEEEECCCCCEEEEEEc---C-CEEeCeeC---------CCcEEEEEEECCCCcE-EEEEECCeEecCCCccccC
Confidence 688976655 999999994 2 35899873 5799999999889986 9999999777888776543
No 21
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=95.61 E-value=0.017 Score=61.74 Aligned_cols=55 Identities=20% Similarity=0.317 Sum_probs=43.4
Q ss_pred EEEEEEecC-CceEEEEeeeCCCc-----cccccCCCCCCCcccccCCCcEEEEEE-eCCceEEEEEEEcCEe
Q 012986 365 VVEIQYSGD-GEIVEVAGSFNGWH-----HRIKMDPLPSSSIIEPIRSRLWSTVLW-LYPGTYEIKFIVDGQW 430 (452)
Q Consensus 365 ~VTF~W~g~-AkeV~IaGSFNnWq-----~~IpMeKd~sss~~~~k~sGvFsttL~-LPPG~YEYKFIVDGeW 430 (452)
.|+|+..++ |+.|.|.+ |+.+. ..++|.+ ...|+|.+.+. +.+|.+ |+|.|+|.|
T Consensus 30 g~~F~vwap~A~~V~l~l-f~~~~~~~~~~~~~m~~---------~~~gvw~~~v~~~~~g~~-Y~y~v~g~~ 91 (718)
T 2vr5_A 30 GVNFSLFSENAEKVELLL-YSLTNQKYPKEIIEVKN---------KTGDIWHVFVPGLRPGQL-YAYRVYGPY 91 (718)
T ss_dssp EEEEEEECSSCSEEEEEE-CCSSCCSSCSEEEEECE---------ESSSEEEEEEETCCTTCE-EEEEEECCE
T ss_pred eEEEEEECCCCCEEEEEE-EcCCCCCCcceEEeCcc---------CCCCEEEEEeCCCCCCCE-EEEEEeeec
Confidence 588986665 99999999 87543 2478886 35799999985 789987 999999853
No 22
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=95.60 E-value=0.026 Score=59.58 Aligned_cols=74 Identities=20% Similarity=0.280 Sum_probs=53.2
Q ss_pred CceEEEEEEec----CCceEEEEeeeC---CCccc--c-ccCCCCCCCcccccCCCcEEEEEEeCCc-eEEEEEEEc--C
Q 012986 362 GLEVVEIQYSG----DGEIVEVAGSFN---GWHHR--I-KMDPLPSSSIIEPIRSRLWSTVLWLYPG-TYEIKFIVD--G 428 (452)
Q Consensus 362 gL~~VTF~W~g----~AkeV~IaGSFN---nWq~~--I-pMeKd~sss~~~~k~sGvFsttL~LPPG-~YEYKFIVD--G 428 (452)
....|+|+... .++.|+|+|+.. +|++. + +|.... ......|.+++.||.| .+||||++= +
T Consensus 585 ~~v~v~f~v~~~~~~~g~~~~v~G~~~~LG~W~~~~a~~~l~~~~------~~~~~~W~~~v~lp~~~~~eyK~~~~~~~ 658 (686)
T 1d3c_A 585 DQVSVRFVVNNATTALGQNVYLTGSVSELGNWDPAKAIGPMYNQV------VYQYPNWYYDVSVPAGKTIEFKFLKKQGS 658 (686)
T ss_dssp SEEEEEEEEECCCCCTTCEEEEEESSGGGTTTCGGGCBCCCBCSS------SSCTTCEEEEEEEETTCEEEEEEEEEETT
T ss_pred CeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccc------CCCCCeEEEEEEeCCCCcEEEEEEEEcCC
Confidence 35789998865 389999999987 89975 5 676410 0256899999999998 799999982 2
Q ss_pred --EeeeCCCCCeecc
Q 012986 429 --QWKVDPQRESVTK 441 (452)
Q Consensus 429 --eW~~DPdnPtVtD 441 (452)
.|-..|+.-+..+
T Consensus 659 ~~~WE~g~Nr~~~~~ 673 (686)
T 1d3c_A 659 TVTWEGGSNHTFTAP 673 (686)
T ss_dssp EEEECCSSCEEEECC
T ss_pred ceEecCCCCeEEECC
Confidence 3666555544333
No 23
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=94.75 E-value=0.063 Score=55.94 Aligned_cols=73 Identities=19% Similarity=0.264 Sum_probs=52.5
Q ss_pred CCceEEEEEEec----CCceEEEEeeeC---CCccc---cccCCCCCCCcccccCCCcEEEEEEeCCc-eEEEEEEE-c-
Q 012986 361 SGLEVVEIQYSG----DGEIVEVAGSFN---GWHHR---IKMDPLPSSSIIEPIRSRLWSTVLWLYPG-TYEIKFIV-D- 427 (452)
Q Consensus 361 sgL~~VTF~W~g----~AkeV~IaGSFN---nWq~~---IpMeKd~sss~~~~k~sGvFsttL~LPPG-~YEYKFIV-D- 427 (452)
.....|+|+... .|+.|+|+|+-. +|++. ++|... ..++.|++++.||+| .+||||+| |
T Consensus 417 ~~~v~V~F~v~~~~t~~Ge~v~vvGs~~eLG~W~~~~a~~~l~~~--------~~p~~W~~~v~lp~~~~~eYKyv~~~~ 488 (516)
T 1vem_A 417 VTPVMQTIVVKNVPTTIGDTVYITGNRAELGSWDTKQYPIQLYYD--------SHSNDWRGNVVLPAERNIEFKAFIKSK 488 (516)
T ss_dssp CCEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCSSSSCEECEEE--------TTTTEEEEEEEEETTCCEEEEEEEECT
T ss_pred cCccceEEEEeeccCCCCCEEEEEeChhhhCCCChhhhceecccC--------CCCCEEEEEEEECCCCcEEEEEEEEeC
Confidence 345889998764 389999999986 79875 356531 234599999999998 59999998 2
Q ss_pred -C---EeeeCCCCCeecc
Q 012986 428 -G---QWKVDPQRESVTK 441 (452)
Q Consensus 428 -G---eW~~DPdnPtVtD 441 (452)
| .|-..++.-...+
T Consensus 489 ~g~v~~WE~g~NR~~~~p 506 (516)
T 1vem_A 489 DGTVKSWQTIQQSWNPVP 506 (516)
T ss_dssp TSCEEEECSSCEEESSCC
T ss_pred CCCeeEEeCCCCEEEecC
Confidence 2 4666665544333
No 24
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=94.65 E-value=0.074 Score=56.72 Aligned_cols=66 Identities=18% Similarity=0.197 Sum_probs=49.1
Q ss_pred EEEEEEecC-CceEEEEeeeCCCcc-ccccCCCCCCCcccccCCCcEEEEEE-eCCceEEEEEEEc--CEe--eeCCCCC
Q 012986 365 VVEIQYSGD-GEIVEVAGSFNGWHH-RIKMDPLPSSSIIEPIRSRLWSTVLW-LYPGTYEIKFIVD--GQW--KVDPQRE 437 (452)
Q Consensus 365 ~VTF~W~g~-AkeV~IaGSFNnWq~-~IpMeKd~sss~~~~k~sGvFsttL~-LPPG~YEYKFIVD--GeW--~~DPdnP 437 (452)
.|+|+..++ |..|.|.+.+++|.. .++|.+. ..|+|++.+. +.+|. .|+|.|+ |.| ..||-..
T Consensus 114 ~~~f~vwap~a~~V~l~~~~~~~~~~~~~m~~~---------~~g~w~~~v~~~~~g~-~Y~f~v~~~g~~~~~~DPya~ 183 (718)
T 2e8y_A 114 HTVFKVWAPAATSAAVKLSHPNKSGRTFQMTRL---------EKGVYAVTVTGDLHGY-EYLFCICNNSEWMETVDQYAK 183 (718)
T ss_dssp EEEEEEECTTCSEEEEEEECTTSCCEEEECEEC---------GGGEEEEEEESCCTTC-EEEEEEEETTEEEEECCTTCS
T ss_pred cEEEEEECCCCCEEEEEEEcCCCcceEEeCccC---------CCCEEEEEECCCCCCC-eEEEEEEeCCeEEEecCCccc
Confidence 588986665 999999999998864 3889874 5699999987 46673 4666664 774 5688776
Q ss_pred eec
Q 012986 438 SVT 440 (452)
Q Consensus 438 tVt 440 (452)
.+.
T Consensus 184 ~~~ 186 (718)
T 2e8y_A 184 AVT 186 (718)
T ss_dssp SBC
T ss_pred ccc
Confidence 543
No 25
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=94.35 E-value=0.058 Score=55.78 Aligned_cols=59 Identities=15% Similarity=0.051 Sum_probs=42.9
Q ss_pred eEEEEE-EecCCceEEE-EeeeCCCcc----ccccCCCCCCCcccccCCCcEEEEEEeCCceEEEEEEEc
Q 012986 364 EVVEIQ-YSGDGEIVEV-AGSFNGWHH----RIKMDPLPSSSIIEPIRSRLWSTVLWLYPGTYEIKFIVD 427 (452)
Q Consensus 364 ~~VTF~-W~g~AkeV~I-aGSFNnWq~----~IpMeKd~sss~~~~k~sGvFsttL~LPPG~YEYKFIVD 427 (452)
..++|+ |...+++|.| .|+|++|+. .++|.+.... ...|+|++.+......+.|+|.|.
T Consensus 23 ~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~m~~~~~~-----~~~~~w~~~i~~~~~~~~Y~f~i~ 87 (585)
T 1wzl_A 23 LRVRLRAKKGDVVRCEVLYADRYASPEEELAHALAGKAGSD-----ERFDYFEALLECSTKRVKYVFLLT 87 (585)
T ss_dssp EEEEEEEETTTCSEEEEEEECTTCCTTSCCEEEECEEEEEC-----SSEEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEEEECCCCccEEEEEECCCcCCCCCceEEEEEEEeecC-----CCEEEEEEEEECCCCeEEEEEEEE
Confidence 455554 3345999999 899999965 4789874210 124579999998777789999985
No 26
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A*
Probab=94.31 E-value=0.052 Score=61.33 Aligned_cols=67 Identities=18% Similarity=0.096 Sum_probs=50.5
Q ss_pred EEEEEEecC-CceEEEEe-eeCCCcc-ccccCCCCCCCcccccCCCcEEEEEE-eCCceEEEEEEEc------CE----e
Q 012986 365 VVEIQYSGD-GEIVEVAG-SFNGWHH-RIKMDPLPSSSIIEPIRSRLWSTVLW-LYPGTYEIKFIVD------GQ----W 430 (452)
Q Consensus 365 ~VTF~W~g~-AkeV~IaG-SFNnWq~-~IpMeKd~sss~~~~k~sGvFsttL~-LPPG~YEYKFIVD------Ge----W 430 (452)
.|+|+..++ |..|.|.+ +|++|.. .++|.+. ...|+|++.+. +.+|.| |+|.|+ |. .
T Consensus 305 gv~F~vwAP~A~~V~L~l~d~~~~~~~~~~m~~~--------~~~GvW~~~v~~~~~G~~-Y~y~v~~~~p~~g~~~~~~ 375 (1083)
T 2fhf_A 305 GVTFRVWAPTAQQVELVIYSADKKVIASHPMTRD--------SASGAWSWQGGSDLKGAF-YRYAMTVYHPQSRKVEQYE 375 (1083)
T ss_dssp EEEEEEECTTCSEEEEEEECTTCCEEEEEECEEC--------TTTCEEEEEECGGGTTCE-EEEEEEEEETTTTEEEEEE
T ss_pred eEEEEEECCCCCEEEEEEEcCCCCccceEECeEC--------CCCCEEEEEECCCCCCCE-EEEEEEeecCCCCccccce
Confidence 588986665 99999999 8899975 4789853 25699999885 788875 777775 43 4
Q ss_pred eeCCCCCeec
Q 012986 431 KVDPQRESVT 440 (452)
Q Consensus 431 ~~DPdnPtVt 440 (452)
..||....+.
T Consensus 376 ~~DPYa~~~~ 385 (1083)
T 2fhf_A 376 VTDPYAHSLS 385 (1083)
T ss_dssp ECCTTCSCBC
T ss_pred ecCCccceec
Confidence 6788776544
No 27
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=93.10 E-value=0.08 Score=54.78 Aligned_cols=61 Identities=15% Similarity=0.147 Sum_probs=43.9
Q ss_pred CceEEEEE-EecCCceEEE-EeeeCCCcc------ccccCCCCCCCcccccCCCcEEEEEEeCCceEEEEEEEc
Q 012986 362 GLEVVEIQ-YSGDGEIVEV-AGSFNGWHH------RIKMDPLPSSSIIEPIRSRLWSTVLWLYPGTYEIKFIVD 427 (452)
Q Consensus 362 gL~~VTF~-W~g~AkeV~I-aGSFNnWq~------~IpMeKd~sss~~~~k~sGvFsttL~LPPG~YEYKFIVD 427 (452)
...+++|+ |...+++|.| .|+|++|+. .++|.+.... ...|+|++.+......+.|+|.|.
T Consensus 21 ~~~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~~~m~~~~~~-----~~~~~w~~~v~~~~~~~~Y~f~i~ 89 (588)
T 1j0h_A 21 ETLHLRLRTKKDDIDRVELLHGDPYDWQNGAWQFQMMPMRKTGSD-----ELFDYWFAEVKPPYRRLRYGFVLY 89 (588)
T ss_dssp SCEEEEEEEETTTCSEEEEEEECTTCEETTEECCEEEECEEEEEC-----SSEEEEEEEECCTTSCEEEEEEEE
T ss_pred CEEEEEEEECCCCccEEEEEECCCCCccccccceEEEEeEEeecC-----CCeEEEEEEEECCCcEEEEEEEEE
Confidence 34566665 3446999999 799999864 4789874210 124679999988777788999885
No 28
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=93.01 E-value=0.16 Score=53.70 Aligned_cols=62 Identities=19% Similarity=0.233 Sum_probs=47.2
Q ss_pred EEEEEEecC-CceEEEEeeeCCCccccccCCCCCCCcccccCCCcEEEEE-EeCCceEEEEEEEc-CEeeeCCCCCeec
Q 012986 365 VVEIQYSGD-GEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRLWSTVL-WLYPGTYEIKFIVD-GQWKVDPQRESVT 440 (452)
Q Consensus 365 ~VTF~W~g~-AkeV~IaGSFNnWq~~IpMeKd~sss~~~~k~sGvFsttL-~LPPG~YEYKFIVD-GeW~~DPdnPtVt 440 (452)
.|+|+..+| |+.|.|.+ +|. .++|.+. ..|+|.+.+ .+.+|. .|+|.|+ |..+.||......
T Consensus 43 ~~~F~vwap~a~~v~l~~---~~~-~~~m~~~---------~~g~~~~~~~~~~~g~-~Y~y~v~~~~~~~DP~a~~~~ 107 (618)
T 3m07_A 43 VVRFRLWATGQQKVMLRL---AGK-DQEMQAN---------GDGWFTLDVAGVTPGT-EYNFVLSDGMVVPDPASRAQK 107 (618)
T ss_dssp EEEEEEECTTCSCEEEEE---TTE-EEECEEC---------STTEEEEEEETCCTTC-EEEEEETTSCEECCTTCSCBS
T ss_pred cEEEEEECCCCCEEEEEE---CCC-cccCeec---------CCEEEEEEeCCCCCCC-EEEEEEeCCeEeccccceeee
Confidence 588986665 99999998 354 4799874 568999988 478886 5899995 5688899876543
No 29
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=92.83 E-value=0.14 Score=54.04 Aligned_cols=65 Identities=17% Similarity=0.040 Sum_probs=45.1
Q ss_pred EEEEEEecC-CceEEEEeeeCCCccc--cccCCCCCCCcccccCCCcEEEEEE-eCCceEEEEEEEcCE----------e
Q 012986 365 VVEIQYSGD-GEIVEVAGSFNGWHHR--IKMDPLPSSSIIEPIRSRLWSTVLW-LYPGTYEIKFIVDGQ----------W 430 (452)
Q Consensus 365 ~VTF~W~g~-AkeV~IaGSFNnWq~~--IpMeKd~sss~~~~k~sGvFsttL~-LPPG~YEYKFIVDGe----------W 430 (452)
-|+|+..+| |+.|.|.+-+++|... ..|.+ ...|+|++.+. +.+|.| |+|.|+|. .
T Consensus 137 g~~F~vwAp~A~~V~l~l~~~~~~~~~~~~~~~---------~~~g~W~~~~~~~~~g~~-Y~y~v~~~~~~~~~~~~~~ 206 (884)
T 4aio_A 137 SVSLHLWAPTAQGVSVCFFDGPAGPALETVQLK---------ESNGVWSVTGPREWENRY-YLYEVDVYHPTKAQVLKCL 206 (884)
T ss_dssp EEEEEEECTTCSEEEEEEESTTTSCEEEEEECE---------EETTEEEEEEEGGGTTCE-EEEEEEEEETTTTEEEEEE
T ss_pred EEEEEEECCCCCEEEEEEEeCCCCCeeeeeeec---------CCCCEEEEEECCCCCCCE-EEEEEeCCCCCcccccCcc
Confidence 589986665 9999999965556543 23333 36899999986 677754 88888752 3
Q ss_pred eeCCCCCee
Q 012986 431 KVDPQRESV 439 (452)
Q Consensus 431 ~~DPdnPtV 439 (452)
..||-...+
T Consensus 207 ~~DPya~~~ 215 (884)
T 4aio_A 207 AGDPYARSL 215 (884)
T ss_dssp ECCTTCSEE
T ss_pred ccCCCeeee
Confidence 458766443
No 30
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=92.68 E-value=0.15 Score=56.33 Aligned_cols=63 Identities=16% Similarity=0.238 Sum_probs=46.8
Q ss_pred EEEEEEecC-CceEEEEeeeCCCc----cccccCCCCCCCcccccCCCcEEEEEE-eCCceEEEEEEE--cCE--eeeCC
Q 012986 365 VVEIQYSGD-GEIVEVAGSFNGWH----HRIKMDPLPSSSIIEPIRSRLWSTVLW-LYPGTYEIKFIV--DGQ--WKVDP 434 (452)
Q Consensus 365 ~VTF~W~g~-AkeV~IaGSFNnWq----~~IpMeKd~sss~~~~k~sGvFsttL~-LPPG~YEYKFIV--DGe--W~~DP 434 (452)
.|+|+..++ |..|.|.+ |++|. ..++|.+. ..|+|++.+. +.+|.+ |+|.| +|. .+.||
T Consensus 326 gv~F~vwaP~A~~V~l~l-f~~~~~~~~~~~~m~~~---------~~gvW~~~v~~~~~g~~-Y~y~v~~~g~~~~~~DP 394 (921)
T 2wan_A 326 ATSFRVWAPTASNVQLLL-YNSEKGSITKQLEMQKS---------DNGTWKLQVSGNLENWY-YLYQVTVNGTTQTAVDP 394 (921)
T ss_dssp EEEEEEECTTCSEEEEEE-ESSSSSCCSEEEECEEC---------GGGEEEEEEESCCTTCE-EEEEEECSSCEEEECCT
T ss_pred eEEEEEECCCCCEEEEEE-EeCCCCCcCeEEeCeeC---------CCCEEEEEEccCCCCCE-EEEEEEeCCeEEEecCC
Confidence 688987666 99999997 99994 34889874 5699999986 567753 66666 565 45688
Q ss_pred CCCe
Q 012986 435 QRES 438 (452)
Q Consensus 435 dnPt 438 (452)
-...
T Consensus 395 ya~~ 398 (921)
T 2wan_A 395 YARA 398 (921)
T ss_dssp TCSS
T ss_pred ccee
Confidence 7654
No 31
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=92.43 E-value=0.023 Score=57.95 Aligned_cols=70 Identities=20% Similarity=0.404 Sum_probs=0.0
Q ss_pred ceEEEEEE-ec---CCceEEEEeeeC---CCccc--cccCCCCCCCcccccCCCcEEEEEEeCCc-eEEEEEEE-c--C-
Q 012986 363 LEVVEIQY-SG---DGEIVEVAGSFN---GWHHR--IKMDPLPSSSIIEPIRSRLWSTVLWLYPG-TYEIKFIV-D--G- 428 (452)
Q Consensus 363 L~~VTF~W-~g---~AkeV~IaGSFN---nWq~~--IpMeKd~sss~~~~k~sGvFsttL~LPPG-~YEYKFIV-D--G- 428 (452)
...|+|+. .. .++.|+|+|+-. +|++. ++|... .....|++++.||+| .+||||+| | |
T Consensus 430 ~v~v~F~v~~~~t~~G~~v~v~G~~~~LG~W~~~~a~~l~~~--------~~~~~W~~~v~lp~~~~~eyKy~~~~~~~~ 501 (527)
T 1gcy_A 430 LVSVSFRCDNGATQMGDSVYAVGNVSQLGNWSPAAALRLTDT--------SGYPTWKGSIALPAGQNEEWKCLIRNEANA 501 (527)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEEEecccCCCCCeEEEEcChhHhCCCCcccCccCccC--------CCCCeEEEEEEeCCCCcEEEEEEEEeCCCC
Confidence 46788886 32 489999999987 79873 778631 256789999999999 59999997 3 3
Q ss_pred ----EeeeCCCCCeec
Q 012986 429 ----QWKVDPQRESVT 440 (452)
Q Consensus 429 ----eW~~DPdnPtVt 440 (452)
.|-..|+.-...
T Consensus 502 ~~~~~We~g~nr~~~~ 517 (527)
T 1gcy_A 502 TQVRQWQGGANNSLTP 517 (527)
T ss_dssp ----------------
T ss_pred cceeEecCCCCeeEEC
Confidence 366666554433
No 32
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=92.36 E-value=0.11 Score=57.52 Aligned_cols=65 Identities=17% Similarity=0.194 Sum_probs=49.1
Q ss_pred EEEEEecC-CceEEEEe-eeCCCcc---ccccCCCCCCCcccccCCCcEEEEEEeCCce-----EEEEEEEc--CE--ee
Q 012986 366 VEIQYSGD-GEIVEVAG-SFNGWHH---RIKMDPLPSSSIIEPIRSRLWSTVLWLYPGT-----YEIKFIVD--GQ--WK 431 (452)
Q Consensus 366 VTF~W~g~-AkeV~IaG-SFNnWq~---~IpMeKd~sss~~~~k~sGvFsttL~LPPG~-----YEYKFIVD--Ge--W~ 431 (452)
|.|+..++ |+.|.|.+ ++++|.. .++|.+. ..|+|++.+.+.||. +.|+|.|+ |. ..
T Consensus 146 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~---------~~gvW~~~v~~~~G~~~~~g~~Y~yrv~~~~~~~~~ 216 (877)
T 3faw_A 146 VEASLWSPSADSVTMIIYDKDNQNRVVATTPLVKN---------NKGVWQTILDTKLGIKNYTGYYYLYEIKRGKDKVKI 216 (877)
T ss_dssp EEEEEECTTCSEEEEEEEETTEEEEEEEEEECEEC---------TTSEEEEEECGGGTCSCCTTCEEEEEEEETTEEEEE
T ss_pred EEEEEECCCCCEEEEEEEeCCCCccceeeeccccC---------CCCEEEEEECCCCCCccCCCeEEEEEEeeCCceeEe
Confidence 88987665 99999998 6777853 5889873 679999999776762 67888886 33 46
Q ss_pred eCCCCCee
Q 012986 432 VDPQRESV 439 (452)
Q Consensus 432 ~DPdnPtV 439 (452)
.||-...+
T Consensus 217 ~DPYA~~~ 224 (877)
T 3faw_A 217 LDPYAKSL 224 (877)
T ss_dssp CCTTCSCB
T ss_pred cCccceec
Confidence 68887544
No 33
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=92.20 E-value=0.21 Score=53.28 Aligned_cols=65 Identities=18% Similarity=0.274 Sum_probs=47.5
Q ss_pred EEEEEEecC-CceEEEEe-eeCCCcc---ccccCCCCCCCcccccCCCcEEEEEEe--CCc-----eEEEEEEEc--CEe
Q 012986 365 VVEIQYSGD-GEIVEVAG-SFNGWHH---RIKMDPLPSSSIIEPIRSRLWSTVLWL--YPG-----TYEIKFIVD--GQW 430 (452)
Q Consensus 365 ~VTF~W~g~-AkeV~IaG-SFNnWq~---~IpMeKd~sss~~~~k~sGvFsttL~L--PPG-----~YEYKFIVD--GeW 430 (452)
.|+|+..++ |+.|.|.+ ++++|.. .++|.+. ..|+|++.+.- .+| -+.|+|.|+ |.+
T Consensus 25 gv~F~vwap~A~~V~l~l~~~~~~~~~~~~~~m~~~---------~~gvW~~~v~~~~~~g~~~~~g~~Y~y~v~~~~~~ 95 (714)
T 2ya0_A 25 QVDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKG---------ERGTWKQTLDSTNKLGITDFTGYYYQYQIERQGKT 95 (714)
T ss_dssp EEEEEEECTTCSEEEEEEECSSCTTSEEEEEECEEC---------GGGEEEEEECTTCSSSCSCCTTCEEEEEEEETTEE
T ss_pred EEEEEEECCCCCEEEEEEEeCCCCCccceEEeCccC---------CCCEEEEEECCccCCCccccCCcEEEEEEEeCCce
Confidence 388986665 99999999 8888864 4889863 56999998863 134 267888886 643
Q ss_pred --eeCCCCCe
Q 012986 431 --KVDPQRES 438 (452)
Q Consensus 431 --~~DPdnPt 438 (452)
..||-...
T Consensus 96 ~~~~DPya~~ 105 (714)
T 2ya0_A 96 VLALDPYAKS 105 (714)
T ss_dssp EEECCTTCSE
T ss_pred EEecCCceee
Confidence 57987644
No 34
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=89.81 E-value=0.37 Score=53.26 Aligned_cols=50 Identities=24% Similarity=0.472 Sum_probs=37.8
Q ss_pred CCceEEEEeee-------CCCccc--cc-cCCCCCCCcccccCCCcEEEEEEeCCceEEEEEEEcCEee
Q 012986 373 DGEIVEVAGSF-------NGWHHR--IK-MDPLPSSSIIEPIRSRLWSTVLWLYPGTYEIKFIVDGQWK 431 (452)
Q Consensus 373 ~AkeV~IaGSF-------NnWq~~--Ip-MeKd~sss~~~~k~sGvFsttL~LPPG~YEYKFIVDGeW~ 431 (452)
.+..+.+.|+| .+|++. .. |.. ..+|.|..+-.||+|.||||+.++|.|.
T Consensus 162 ~~~~~~~~g~~~~~~g~~~~w~p~~~~~~~~~---------~~~~~y~~~~~l~~g~y~~kv~~~~~w~ 221 (921)
T 2wan_A 162 NPVTAVLVGDLQQALGAANNWSPDDDHTLLKK---------INPNLYQLSGTLPAGTYQYKIALDHSWN 221 (921)
T ss_dssp CCCCEEEEETTSGGGTCSSSSCTTCGGGBCEE---------EETTEEEEEEEECSEEEEEEEEETTSSS
T ss_pred cccccccccchhhhccccccCCCCCCcceeec---------cCCcceeeeeccCCcceeEEEeecCccc
Confidence 35567888866 468764 22 332 2578999999999999999999998774
No 35
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=88.28 E-value=0.27 Score=51.34 Aligned_cols=60 Identities=10% Similarity=0.086 Sum_probs=41.6
Q ss_pred eEEEEEEe----cC-CceEEEEeeeCCCccccccCC--CCCCCcccccCCCcEEEEEEeCCceEEEEEEEcC
Q 012986 364 EVVEIQYS----GD-GEIVEVAGSFNGWHHRIKMDP--LPSSSIIEPIRSRLWSTVLWLYPGTYEIKFIVDG 428 (452)
Q Consensus 364 ~~VTF~W~----g~-AkeV~IaGSFNnWq~~IpMeK--d~sss~~~~k~sGvFsttL~LPPG~YEYKFIVDG 428 (452)
..|+|+.. ++ ++.|.|.+.|++-...++|.+ ... ....|+|++.+........|+|.|+|
T Consensus 30 ~~v~f~v~~~~~ap~a~~V~l~~~~~~~~~~~~m~~~~~~~-----~~~~~~w~~~i~~~~~g~~Y~f~i~~ 96 (637)
T 1ji1_A 30 QSVTLKLRTFKGDITSANIKYWDTADNAFHWVPMVWDSNDP-----TGTFDYWKGTIPASPSIKYYRFQIND 96 (637)
T ss_dssp CCEEEEEEEETTCCSEEEEEEEETTTTEEEEEECEEEEECT-----TSSEEEEEEEECCCSSCEEEEEEEEE
T ss_pred CEEEEEEEEecCcCCeeEEEEEEecCCCEEEEEeEEeeccc-----cCCeeEEEEEEECCCceEEEEEEEEE
Confidence 35788754 44 899999999875112488986 311 02458999999876566679999974
No 36
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=87.35 E-value=0.15 Score=52.73 Aligned_cols=60 Identities=18% Similarity=0.211 Sum_probs=42.1
Q ss_pred ceEEEEE-EecCCceEEE-EeeeCCCcc---ccccCCCCCCCcccccCCCcEEEEEEeCCceEEEEEEEc
Q 012986 363 LEVVEIQ-YSGDGEIVEV-AGSFNGWHH---RIKMDPLPSSSIIEPIRSRLWSTVLWLYPGTYEIKFIVD 427 (452)
Q Consensus 363 L~~VTF~-W~g~AkeV~I-aGSFNnWq~---~IpMeKd~sss~~~~k~sGvFsttL~LPPG~YEYKFIVD 427 (452)
...++|+ |...+++|.| .|+|++|.. .++|.+.... ...|+|++.+......+.|||.|.
T Consensus 22 ~~~~~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~M~~~~~~-----~~~~~w~~~i~~~~~~~~Y~f~i~ 86 (583)
T 1ea9_C 22 TVHLRIRTKKDDMTAVYALAGDKYMWDHTMEYVPMTKLATD-----ELFDYWECEVTPPYRRVKYGFLLQ 86 (583)
T ss_dssp CEECCCEECTTCCSBEEEEEECSSSCTTTCEEEEECEEEEC-----SSCEEECCEECCTTSCEEECBCCE
T ss_pred EEEEEEEECCCCccEEEEEECCCcCCCCcEEEEEEEEEecc-----CCeEEEEEEEECCCceEEEEEEEE
Confidence 3455554 3445999999 799999975 4789874210 124679999987777778888874
No 37
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=83.31 E-value=1.9 Score=48.31 Aligned_cols=63 Identities=17% Similarity=0.295 Sum_probs=45.7
Q ss_pred EEEEEecC-CceEEEEe-eeCCCcc---ccccCCCCCCCcccccCCCcEEEEEEeC--Cc-----eEEEEEEEc--CE--
Q 012986 366 VEIQYSGD-GEIVEVAG-SFNGWHH---RIKMDPLPSSSIIEPIRSRLWSTVLWLY--PG-----TYEIKFIVD--GQ-- 429 (452)
Q Consensus 366 VTF~W~g~-AkeV~IaG-SFNnWq~---~IpMeKd~sss~~~~k~sGvFsttL~LP--PG-----~YEYKFIVD--Ge-- 429 (452)
|.|+..++ |+.|.|.+ +|++|.. .++|.+. ..|+|++.+.-. +| -+.|+|.|+ |.
T Consensus 333 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~---------~~gvW~~~v~~~~~~g~~~~~G~~Y~y~i~~~~~~~ 403 (1014)
T 2ya1_A 333 VDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKG---------ERGTWKQTLDSTNKLGITDFTGYYYQYQIERQGKTV 403 (1014)
T ss_dssp EEEEEECTTCSEEEEEEECSSCTTSEEEEEECEEC---------GGGEEEEEECTTCSSCCSCCTTCEEEEEEEETTEEE
T ss_pred EEEEEECCCCCEEEEEEEECCCCCccceEEecccC---------CCCEEEEEEcccccCCccccCCcEEEEEEEeCCeEE
Confidence 78986665 99999999 8888864 4889863 579999988631 23 256777775 54
Q ss_pred eeeCCCCC
Q 012986 430 WKVDPQRE 437 (452)
Q Consensus 430 W~~DPdnP 437 (452)
...||-..
T Consensus 404 ~~~DPYa~ 411 (1014)
T 2ya1_A 404 LALDPYAK 411 (1014)
T ss_dssp EECCTTCS
T ss_pred EecCccce
Confidence 45788654
No 38
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=83.23 E-value=2.3 Score=36.01 Aligned_cols=66 Identities=17% Similarity=0.258 Sum_probs=47.8
Q ss_pred eEEEEEEecCCceEEEEeeeC--CCccc--cccCCCCCCCcccccCCCcEEEEEEeCCc-eEEEEEEEcC--EeeeCCCC
Q 012986 364 EVVEIQYSGDGEIVEVAGSFN--GWHHR--IKMDPLPSSSIIEPIRSRLWSTVLWLYPG-TYEIKFIVDG--QWKVDPQR 436 (452)
Q Consensus 364 ~~VTF~W~g~AkeV~IaGSFN--nWq~~--IpMeKd~sss~~~~k~sGvFsttL~LPPG-~YEYKFIVDG--eW~~DPdn 436 (452)
..|++-|..++..|+|==.+. .|+.. ++|.+. ...|.|..+|.|+.+ .++|.| -|| .|-.+...
T Consensus 10 ~~vTvyY~sg~~~~ylHy~~~~g~Wt~vpgv~M~~~--------~~~Gw~~~TI~~~~~~~l~~~F-~dG~~~WDNN~g~ 80 (102)
T 2c3v_A 10 TDITIYYKTGWTHPHIHYSLNQGAWTTLPGVPLTKS--------EXEGXVKVTIEAEEGSQLRAAF-NNGSGQWDNNQGR 80 (102)
T ss_dssp CSEEEEEECCCSSCEEEEEETTCCBCCTTCEECEEC--------SSTTEEEEEECCCTTCEEEEEE-ECSSSCEECGGGT
T ss_pred CEEEEEEcCCCCcEEEEEeCCCCCcccCCCcCcccc--------ccCCceEEEEecCCCceEEEEE-eCCCcccccCCCc
Confidence 457777777788888876665 48763 789763 147888999999975 899999 565 59775554
Q ss_pred Ce
Q 012986 437 ES 438 (452)
Q Consensus 437 Pt 438 (452)
-+
T Consensus 81 Ny 82 (102)
T 2c3v_A 81 DY 82 (102)
T ss_dssp CE
T ss_pred ce
Confidence 43
No 39
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=83.20 E-value=0.78 Score=42.07 Aligned_cols=51 Identities=12% Similarity=0.059 Sum_probs=40.0
Q ss_pred CCceEEEEeeeCCCcc--ccccCCCCCCCcccccCCCcEEEEEEeCCceEEEEEEEcCEee
Q 012986 373 DGEIVEVAGSFNGWHH--RIKMDPLPSSSIIEPIRSRLWSTVLWLYPGTYEIKFIVDGQWK 431 (452)
Q Consensus 373 ~AkeV~IaGSFNnWq~--~IpMeKd~sss~~~~k~sGvFsttL~LPPG~YEYKFIVDGeW~ 431 (452)
..++++|+|++++|.. ..+|.+.. ...|.|...+.|+.|. +|||.-+..|-
T Consensus 11 ~p~~lY~vG~~~gW~~~~~~~m~~~~-------~~~g~y~~~~yl~ag~-~fKf~~~~~~~ 63 (221)
T 4fch_A 11 PPKTMFIVGSMLDTDWKVWKPMAGVY-------GMDGQFYSMIYFDANS-EFKFGTKENEY 63 (221)
T ss_dssp CCSCCEEEETTTCTTSCCEEECEECT-------TCTTEEEEEEEECTTE-EEEEESSTTCC
T ss_pred CcceEEEEecCCCCCCCccceeeecc-------CCCceEEEEEEEcCCC-eEEEeeccCcc
Confidence 3688999999999863 36787652 2579999999998774 89999886653
No 40
>2eef_A Protein phosphatase 1, regulatory (inhibitor) subunit 3B; CBM_21 domain, carbohydrate binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.54 E-value=6.5 Score=35.50 Aligned_cols=63 Identities=13% Similarity=0.253 Sum_probs=43.6
Q ss_pred CCceEEEEeeeCCCccc--cccCCCCCCCcccccCCCcEEEEEEeCC----c---eEEEEEEEcCE--eeeCCCCC
Q 012986 373 DGEIVEVAGSFNGWHHR--IKMDPLPSSSIIEPIRSRLWSTVLWLYP----G---TYEIKFIVDGQ--WKVDPQRE 437 (452)
Q Consensus 373 ~AkeV~IaGSFNnWq~~--IpMeKd~sss~~~~k~sGvFsttL~LPP----G---~YEYKFIVDGe--W~~DPdnP 437 (452)
-.+.|.|.=+|++|... +++....+ ..+......|...+.||+ + .+-.+|.|+|+ |-.+....
T Consensus 59 feK~V~VR~T~D~Wkt~~dv~a~y~~~--~~~~~~~D~F~F~I~lp~~~~~~~~leFcIrY~v~g~eyWDNN~G~N 132 (156)
T 2eef_A 59 FEKTVKIRMTFDTWKSYTDFPCQYVKD--TYAGSDRDTFSFDISLPEKIQSYERMEFAVYYECNGQTYWDSNRGKN 132 (156)
T ss_dssp SCCEEEEEEESSTTSSEEEEECEECCC--SSSCSSSCEEEECCCCCSCCCTTSCCEEEEEEEETTEEEEESGGGSC
T ss_pred CCcEEEEEEeECCCcccEEEEEEEccc--cCCCCCceEEEEEEECCCccCCCcEEEEEEEEEeCCCEEecCCCCee
Confidence 37999999999999875 45544321 111124568999999886 3 67889999997 76654443
No 41
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=60.68 E-value=7.7 Score=38.86 Aligned_cols=46 Identities=15% Similarity=0.272 Sum_probs=35.2
Q ss_pred CceEEEEeeeCCCccc--cccCCCCCCCcccccCCCcEEEEEEeCCceEEEEEEEc
Q 012986 374 GEIVEVAGSFNGWHHR--IKMDPLPSSSIIEPIRSRLWSTVLWLYPGTYEIKFIVD 427 (452)
Q Consensus 374 AkeV~IaGSFNnWq~~--IpMeKd~sss~~~~k~sGvFsttL~LPPG~YEYKFIVD 427 (452)
....+|+|++++|... .+|.++. ...+.|.....+..+. +|||+.-
T Consensus 150 ~~~~YlvG~~~gW~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~-~fK~~~~ 197 (470)
T 4fe9_A 150 PDGYYIVGDFTGWDGNSAQQMKKDA-------LDENLYILEAEIESTS-NFKIFPA 197 (470)
T ss_dssp TTCEEEEETTTCSSGGGCEECEECS-------SCTTEEEEEEEESSCC-EEEEEEG
T ss_pred cceeEEEcccCCCCcccCeeeeeec-------CCCceEEEEEEeccCc-eEEEeec
Confidence 4679999999999854 4565542 3678999988887766 7999974
No 42
>2djm_A Glucoamylase A; beta sandwich, anti-parallel, strach binding, carbohydrate binding, sugar binding protein; NMR {Rhizopus oryzae} PDB: 2v8l_A* 2v8m_A* 2vq4_A
Probab=50.07 E-value=38 Score=28.65 Aligned_cols=58 Identities=16% Similarity=0.221 Sum_probs=38.8
Q ss_pred CceEEEEee--eCCCcc-c--cccCCCCCCCcccccCCCcEEEEEEeCCc-eEEEEEEEcCE--eeeCC
Q 012986 374 GEIVEVAGS--FNGWHH-R--IKMDPLPSSSIIEPIRSRLWSTVLWLYPG-TYEIKFIVDGQ--WKVDP 434 (452)
Q Consensus 374 AkeV~IaGS--FNnWq~-~--IpMeKd~sss~~~~k~sGvFsttL~LPPG-~YEYKFIVDGe--W~~DP 434 (452)
.+.|.|.=+ |++|.. . ++.....+. ...+-..|...+.||+- .+-.+|.|+|+ |-.+.
T Consensus 33 eK~V~VR~T~~~D~W~t~~~dv~a~y~~~~---~~~~~D~F~F~i~l~~~~eFcIrY~v~g~eyWDNN~ 98 (106)
T 2djm_A 33 SKKVTVVYADGSDNWNNNGNIIAASFSGPI---SGSNYEYWTFSASVKGIKEFYIKYEVSGKTYYDNNN 98 (106)
T ss_dssp CEEEEEEEEETTSSCSSCCCEEECEEEEEC---TTSSCEEEEEEECCSSEEEEEEEEEESSCEEEECSS
T ss_pred CcEEEEEECCCcCCCccccEEEEEEEecCC---CCCCeEEEEEEEECCCCeEEEEEEEECCcEEEcCCC
Confidence 678888877 999987 3 222211100 01356789999999866 68889999996 65443
No 43
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=43.52 E-value=19 Score=36.04 Aligned_cols=53 Identities=15% Similarity=0.287 Sum_probs=37.3
Q ss_pred CceEEEEeeeCCCccc-------cccCCCCCCCcccccCCCcEEEEEEeCCceEEEEEEEcCEeeeCC
Q 012986 374 GEIVEVAGSFNGWHHR-------IKMDPLPSSSIIEPIRSRLWSTVLWLYPGTYEIKFIVDGQWKVDP 434 (452)
Q Consensus 374 AkeV~IaGSFNnWq~~-------IpMeKd~sss~~~~k~sGvFsttL~LPPG~YEYKFIVDGeW~~DP 434 (452)
...++|+|++++|.-. .+|.... ...+.|...+.+..| .+|||.-++.|-.+-
T Consensus 260 ~~~lyivG~~~~wg~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~a~-gefKF~~~~~W~~~~ 319 (470)
T 4fe9_A 260 PTELYMTGSAYNWGTPAGDPNAWKALVPVN-------GTKGTFWGIFYFAAN-DQVKFAPQANWGNDF 319 (470)
T ss_dssp CSCCEEEEGGGGGGCSTTCTTTCEECEECT-------TCTTEEEEEEEECTT-CEEEEESSSSSSSCB
T ss_pred cceEEEEeecccCCCCCCCccccccccccc-------CcCceEEEEEEECCC-ceEEEEecCCccccc
Confidence 5689999999987531 2333321 356889888888654 589999998886543
No 44
>4dny_A Metalloprotease STCE; metzincin, bacterial zinc metalloprotease, O-linked glycoPro hydrolase; 1.61A {Escherichia coli}
Probab=41.31 E-value=27 Score=30.90 Aligned_cols=25 Identities=32% Similarity=0.461 Sum_probs=20.5
Q ss_pred EEEEeCCc-eEEEEEEEcCEeeeCCCC
Q 012986 411 TVLWLYPG-TYEIKFIVDGQWKVDPQR 436 (452)
Q Consensus 411 ttL~LPPG-~YEYKFIVDGeW~~DPdn 436 (452)
.++.|..| .|.|+| ++|+|+.+-+.
T Consensus 98 ~svtl~rG~t~~F~y-~~g~Wv~~gd~ 123 (126)
T 4dny_A 98 RKVTLSVGNTLLFKY-VNGQWFRSGEL 123 (126)
T ss_dssp EEEEECTTCEEEEEE-ETTEEEETTCC
T ss_pred cEEEecCCCEEEEEE-cCCEEEEcccc
Confidence 34578899 799999 99999987654
No 45
>4fem_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: ACX; 2.50A {Bacteroides thetaiotaomicron}
Probab=39.20 E-value=20 Score=34.62 Aligned_cols=51 Identities=12% Similarity=0.062 Sum_probs=37.9
Q ss_pred CceEEEEeeeCCCcc--ccccCCCCCCCcccccCCCcEEEEEEeCCceEEEEEEEcCEeee
Q 012986 374 GEIVEVAGSFNGWHH--RIKMDPLPSSSIIEPIRSRLWSTVLWLYPGTYEIKFIVDGQWKV 432 (452)
Q Consensus 374 AkeV~IaGSFNnWq~--~IpMeKd~sss~~~~k~sGvFsttL~LPPG~YEYKFIVDGeW~~ 432 (452)
...++|+|++.+|.. ..+|.+.. ...|.|.....|+.| .+|||.-...|-.
T Consensus 149 p~~lYlvG~~~~~~w~~~~~l~~~~-------~~~g~y~~~~yl~~~-~~fKf~~~~~~~~ 201 (358)
T 4fem_A 149 PKTMFIVGSMLDTDWKVWKPMAGVY-------GMDGQFYSMIYFDAN-SEFKFGTKENEYI 201 (358)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECT-------TSTTEEEEEEEECTT-EEEEEESSTTCCB
T ss_pred cceEEEeccccCCCCcccceeeecc-------CCCceEEEEEEecCC-ceEEeccccCCcc
Confidence 578999999987643 35676542 357999999999876 6799988766543
No 46
>4ham_A LMO2241 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, winged helix-turn-helix, four helix bundle; 1.91A {Listeria monocytogenes}
Probab=34.47 E-value=32 Score=28.73 Aligned_cols=31 Identities=19% Similarity=0.354 Sum_probs=27.2
Q ss_pred chHHHHHHHHHHHhcCCCCCC-CCChHHHHHh
Q 012986 61 NEELYNDLREFLSTVGLSESH-VPSMKELSAH 91 (452)
Q Consensus 61 ~~~l~~d~~ef~s~~~lp~~~-vps~kel~~h 91 (452)
-+.++..|++.+-.=.|++|. +||.+||.++
T Consensus 16 Y~QI~~~i~~~I~~G~l~pG~~LPser~La~~ 47 (134)
T 4ham_A 16 YEQIVQKIKEQVVKGVLQEGEKILSIREFASR 47 (134)
T ss_dssp HHHHHHHHHHHHHHTSSCTTCEECCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCCCCCccHHHHHHH
Confidence 367899999999999999995 9999999875
No 47
>3tqn_A Transcriptional regulator, GNTR family; regulatory functions; 2.80A {Coxiella burnetii}
Probab=34.23 E-value=34 Score=27.92 Aligned_cols=35 Identities=17% Similarity=0.303 Sum_probs=29.1
Q ss_pred chHHHHHHHHHHHhcCCCCCC-CCChHHHHHhchhh
Q 012986 61 NEELYNDLREFLSTVGLSESH-VPSMKELSAHGRDD 95 (452)
Q Consensus 61 ~~~l~~d~~ef~s~~~lp~~~-vps~kel~~hgr~d 95 (452)
-..+++.|++.+..-.||+|. +||.+||.++=.+-
T Consensus 11 ~~~i~~~i~~~I~~g~~~~G~~lPs~~~La~~~~vS 46 (113)
T 3tqn_A 11 YQQLRDKIVEAIIDGSYVEGEMIPSIRKISTEYQIN 46 (113)
T ss_dssp HHHHHHHHHHHHHHTSSCTTCEECCHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHcCCCCCCCcCcCHHHHHHHHCcC
Confidence 357899999999999999885 89999999874443
No 48
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=32.17 E-value=1.1e+02 Score=25.43 Aligned_cols=50 Identities=24% Similarity=0.312 Sum_probs=33.8
Q ss_pred hhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhcccchHHHHHHHh
Q 012986 298 LEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEE 358 (452)
Q Consensus 298 ~e~~~~~~m~~qkele~~r~k~q~e~~K~aLa~~~~k~~~ei~eA~kli~eK~~~LdaAe~ 358 (452)
-||++|++=+.--|-|-.+-...+--||+.|+.|+ +.+..|+.++..-..
T Consensus 26 qEi~~Lr~kv~elEnErlQyEkKLKsTK~El~~Lq-----------~qLe~kd~ei~rL~~ 75 (81)
T 3qh9_A 26 QELRHLKIKVEELENERNQYEWKLKATKAEVAQLQ-----------EQVALKDAEIERLHS 75 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH-----------HHHHhhHHHHHHHHH
Confidence 47888887776666666666778888998888774 445555555544443
No 49
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=31.98 E-value=1.3e+02 Score=25.61 Aligned_cols=64 Identities=17% Similarity=0.292 Sum_probs=48.2
Q ss_pred chhhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhcccchHHHHHHHhh
Q 012986 296 NQLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEES 359 (452)
Q Consensus 296 ~~~e~~~~~~m~~qkele~~r~k~q~e~~K~aLa~~~~k~~~ei~eA~kli~eK~~~LdaAe~a 359 (452)
..-||.+++-.+..-+.|+.-++.+...-..+|+-++...+.++..++..|.....+|..++..
T Consensus 34 ~k~Ei~elrr~iq~L~~el~~l~~~~~~LE~~l~e~e~~~~~~l~~~q~~i~~lE~eL~~~r~e 97 (129)
T 3tnu_B 34 TKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAELEEALQKAKQD 97 (129)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 3457888888877777777767666666667778888888888889998888877777766554
No 50
>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}
Probab=31.60 E-value=84 Score=26.78 Aligned_cols=57 Identities=19% Similarity=0.359 Sum_probs=39.4
Q ss_pred eEEEEEEecC---CceEEEEe-eeCCCccccccCCCCCCCcccccCCCcEEEEE-EeCCceEEEEEEE-cCEeeeC
Q 012986 364 EVVEIQYSGD---GEIVEVAG-SFNGWHHRIKMDPLPSSSIIEPIRSRLWSTVL-WLYPGTYEIKFIV-DGQWKVD 433 (452)
Q Consensus 364 ~~VTF~W~g~---AkeV~IaG-SFNnWq~~IpMeKd~sss~~~~k~sGvFsttL-~LPPG~YEYKFIV-DGeW~~D 433 (452)
.-|.+.+.++ -..|.|.| +-.+| ++|.+ . ..+|...- ..+.|-+.||+.. ||+|.+-
T Consensus 28 l~VlV~nv~G~GdI~~V~Ik~~~~~~W---~~M~r---------n-Ga~W~~~s~~~L~GplSfRvtts~G~~~va 90 (108)
T 2jnz_A 28 LVLDIKYTRPGDSLAEVELRQHGSEEW---EPLTK---------K-GNVWEVKSSKPLVGPFNFRFMSKGGMRNVF 90 (108)
T ss_dssp EEEEEEEEBTTBCEEEEEEECTTCCCC---EECEE---------E-TTEEEEECSSCCCSSEEEEEEETTTEEEEE
T ss_pred EEEEEEEeCCCCCEEEEEEEeCCCCcE---eEccc---------c-CCEeEeCCCCCCCCCEEEEEEEcCCcEEEE
Confidence 4566777654 36789996 77788 48986 3 56898765 1345688888888 5787664
No 51
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=28.88 E-value=31 Score=31.39 Aligned_cols=49 Identities=16% Similarity=0.259 Sum_probs=33.9
Q ss_pred ceEEEEeee--CCCccc--cccCCCCCCCcccccCCCcEEEEEEeCCceEEEEEEEcCEe
Q 012986 375 EIVEVAGSF--NGWHHR--IKMDPLPSSSIIEPIRSRLWSTVLWLYPGTYEIKFIVDGQW 430 (452)
Q Consensus 375 keV~IaGSF--NnWq~~--IpMeKd~sss~~~~k~sGvFsttL~LPPG~YEYKFIVDGeW 430 (452)
..|+|+|+- ++|... .+|.... ...+.|.....|..|.+.++|-++..|
T Consensus 117 ~~v~liG~at~~gW~~~~~~~~t~~~-------t~~g~~~~~~~l~~Ge~k~~~~~~~DW 169 (221)
T 4fch_A 117 AEVYLFGNTTGGSWAFNDEWKFTVPA-------TKDGNFVSPAMTASGEVRMCFKTDLDW 169 (221)
T ss_dssp CCEEEEBGGGTSBCSCBGGGBCBCCS-------STTCCEECCCCCSCEECEEEECCSSCG
T ss_pred ceEEEEEeecCCCCCCCcccceeecc-------CCCceEEeEEEecCCcEEEEEcCCCCc
Confidence 469999984 588754 4555321 367889888899999877766555444
No 52
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=27.51 E-value=1.3e+02 Score=25.73 Aligned_cols=63 Identities=16% Similarity=0.211 Sum_probs=41.2
Q ss_pred hhhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhcccchHHHHHHHhh
Q 012986 297 QLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEES 359 (452)
Q Consensus 297 ~~e~~~~~~m~~qkele~~r~k~q~e~~K~aLa~~~~k~~~ei~eA~kli~eK~~~LdaAe~a 359 (452)
.-||.+++-.+..-+.|+..++.+...-..+|+-++...+.++..++..|.....+|..++..
T Consensus 37 k~Ei~elrr~iq~L~~el~~l~~~~~sLE~~l~e~e~~~~~~l~~~q~~i~~lE~eL~~~r~e 99 (131)
T 3tnu_A 37 KSEISELRRTMQNLEIELQSQLSMKASLENSLEETKGRYCMQLAQIQEMIGSVEEQLAQLRCE 99 (131)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346777777666666666656555555556677777777888888888888777777666554
No 53
>3mxz_A Tubulin-specific chaperone A; helix bundle; 1.60A {Arabidopsis thaliana}
Probab=27.18 E-value=1e+02 Score=26.48 Aligned_cols=63 Identities=8% Similarity=0.178 Sum_probs=51.6
Q ss_pred hhhHHHHHHhH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhccc---c----hHHHHHHHhhC
Q 012986 298 LEIDHLKFMLH--QKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISD---K----DEELIAAEESL 360 (452)
Q Consensus 298 ~e~~~~~~m~~--qkele~~r~k~q~e~~K~aLa~~~~k~~~ei~eA~kli~e---K----~~~LdaAe~aL 360 (452)
-+-+++..|-. -++-++.+..+-+.++++++.-++.+...++.+-+.+|.+ + ..++.+|+.++
T Consensus 33 ~q~~kiekmk~e~~dey~iKkq~evL~Et~~mipd~~~RL~~a~~~L~~~l~~~~~~~~~~~ee~~~Ak~~l 104 (116)
T 3mxz_A 33 REAAKTADMKDKGADPYDLKQQENVLGESRMMIPDCHKRLESALADLKSTLAELEETDEKEGPEIEDAKKTV 104 (116)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-CCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHH
Confidence 34566677765 3788999999999999999999999999999999999984 2 34888888875
No 54
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=26.33 E-value=82 Score=32.79 Aligned_cols=50 Identities=10% Similarity=0.011 Sum_probs=33.9
Q ss_pred eEEEEEEec-CCceEEEEeeeCCCccccccCCCCCCCcccccCCC---cEEEEEEeCCceEEEEEEE
Q 012986 364 EVVEIQYSG-DGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSR---LWSTVLWLYPGTYEIKFIV 426 (452)
Q Consensus 364 ~~VTF~W~g-~AkeV~IaGSFNnWq~~IpMeKd~sss~~~~k~sG---vFsttL~LPPG~YEYKFIV 426 (452)
..+.|+-.. ....|.+.|. ..+||.+.. ..+ .|.+.+..+.....|+|.|
T Consensus 125 ~~~r~~~~~~~~~~~~~~~~-----~~~~m~~~~--------~~~~~d~w~~~v~~~~~~~~Y~f~i 178 (645)
T 4aef_A 125 VHVLLRTQKGVIKGATFLGE-----KHVPMRKKA--------SDELFDYFEVIVEGGDKRLNYSFEV 178 (645)
T ss_dssp EEEEEEEETTTEEEEEEESS-----SEEECEEEE--------ECSSEEEEEEEEECSCSCEEEEEEE
T ss_pred EEEEEEcccCCcceEEEeCC-----CEEEEEEEe--------cCCCeEEEEEEEECCCCceEEEEEE
Confidence 344444333 3677877753 458998852 344 4888898888888899988
No 55
>3neu_A LIN1836 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; 1.58A {Listeria innocua}
Probab=25.52 E-value=63 Score=26.80 Aligned_cols=34 Identities=12% Similarity=0.167 Sum_probs=28.3
Q ss_pred chHHHHHHHHHHHhcCCCCC-CCCChHHHHHhchh
Q 012986 61 NEELYNDLREFLSTVGLSES-HVPSMKELSAHGRD 94 (452)
Q Consensus 61 ~~~l~~d~~ef~s~~~lp~~-~vps~kel~~hgr~ 94 (452)
-..++..|++.+..-.+|+| .+||.+||.++=.+
T Consensus 15 ~~~i~~~i~~~I~~g~~~~g~~Lps~~~La~~~~v 49 (125)
T 3neu_A 15 YSQISDWMKKQMITGEWKGEDKLPSVREMGVKLAV 49 (125)
T ss_dssp HHHHHHHHHHHHHTTSSCTTCBCCCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHCc
Confidence 36789999999999999887 58999999987444
No 56
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=25.45 E-value=90 Score=33.41 Aligned_cols=47 Identities=21% Similarity=0.297 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhcccchHHHHHHHhhC
Q 012986 310 KEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEESL 360 (452)
Q Consensus 310 kele~~r~k~q~e~~K~aLa~~~~k~~~ei~eA~kli~eK~~~LdaAe~aL 360 (452)
-|-+|-|++.+|+++--..|-.+-+ +.++++++.+.+.+||+|...+
T Consensus 319 Aer~~e~a~ael~~a~k~~a~~~er----~~~t~~~~~~~~~~~~~~n~~~ 365 (551)
T 2b5u_A 319 AERNYERARAELNQANEDVARNQER----QAKAVQVYNSRKSELDAANKTL 365 (551)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHhhHHHHHhhhhHH
Confidence 3445666666666655555544443 3478888888888888887764
No 57
>2eap_A Lymphocyte cytosolic protein 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.14 E-value=40 Score=28.42 Aligned_cols=33 Identities=27% Similarity=0.402 Sum_probs=29.4
Q ss_pred CCCCCCCCChHHHHHhchhhHHHHHHhhhHHHH
Q 012986 76 GLSESHVPSMKELSAHGRDDLANIVRRRGYKFI 108 (452)
Q Consensus 76 ~lp~~~vps~kel~~hgr~dlan~vrrrgyk~i 108 (452)
|..=..||+|+|-..=...|+|.-+|+.||+=+
T Consensus 7 ~m~~~~~ps~seV~~Wsp~~VadWLkk~g~~~c 39 (90)
T 2eap_A 7 GMALRNVPFRSEVLGWDPDSLADYFKKLNYKDC 39 (90)
T ss_dssp CSSTTCCCCHHHHTTCCTTTHHHHHHHTTCHHH
T ss_pred cccccccccCccccccCHHHHHHHHHHcCCchH
Confidence 555678999999999999999999999999663
No 58
>2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A
Probab=24.02 E-value=40 Score=33.16 Aligned_cols=25 Identities=24% Similarity=0.534 Sum_probs=20.4
Q ss_pred CCceEEEEEEEcCEee---eCCCCCeec
Q 012986 416 YPGTYEIKFIVDGQWK---VDPQRESVT 440 (452)
Q Consensus 416 PPG~YEYKFIVDGeW~---~DPdnPtVt 440 (452)
+.|.|.++|..+|+|+ +|+..|+..
T Consensus 120 ~~G~y~vr~~~~G~W~~VvVDD~LP~~~ 147 (339)
T 2r9f_A 120 YAGIFHFQLWQFGEWVDVVVDDLLPTKD 147 (339)
T ss_dssp CCSEEEEEEEETTEEEEEEEESCEEEET
T ss_pred CCceEEEEEeeCCEEEEEEEcCCCcccC
Confidence 5699999999999996 477777654
No 59
>1mhx_A Immunoglobulin-binding protein G; alpha-beta protein, redesigned first beta-hairpin, immune SY; 1.80A {Finegoldia magna} SCOP: d.15.7.1 PDB: 1mi0_A
Probab=23.84 E-value=26 Score=27.65 Aligned_cols=14 Identities=36% Similarity=0.847 Sum_probs=11.5
Q ss_pred EcCEeeeCCCCCee
Q 012986 426 VDGQWKVDPQRESV 439 (452)
Q Consensus 426 VDGeW~~DPdnPtV 439 (452)
|||+|.+||.-.+.
T Consensus 48 vdgeWsYD~ATkTF 61 (65)
T 1mhx_A 48 VDGEWTYDDAAKTF 61 (65)
T ss_dssp CCSEEEEETTTTEE
T ss_pred CccEEEecCceeEE
Confidence 68999999987654
No 60
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=21.60 E-value=49 Score=27.83 Aligned_cols=18 Identities=22% Similarity=0.595 Sum_probs=13.7
Q ss_pred ceEEEEEEEcCEeeeCCCC
Q 012986 418 GTYEIKFIVDGQWKVDPQR 436 (452)
Q Consensus 418 G~YEYKFIVDGeW~~DPdn 436 (452)
|-|+|.|. +|.|+++-+.
T Consensus 67 sG~hfd~~-~~~Wi~~r~g 84 (106)
T 1ew4_A 67 GGYHFDLK-GDEWICDRSG 84 (106)
T ss_dssp CEEEEEEE-TTEEEETTTC
T ss_pred Cceeeeec-CCEEEECCCC
Confidence 33889985 8999987554
No 61
>2nqa_A Calpain 8; calpain, calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC; HET: AR7; 2.20A {Homo sapiens}
Probab=21.51 E-value=34 Score=33.35 Aligned_cols=25 Identities=24% Similarity=0.667 Sum_probs=20.2
Q ss_pred CCceEEEEEEEcCEee---eCCCCCeec
Q 012986 416 YPGTYEIKFIVDGQWK---VDPQRESVT 440 (452)
Q Consensus 416 PPG~YEYKFIVDGeW~---~DPdnPtVt 440 (452)
+.|.|.++|..+|+|+ +|+..|+..
T Consensus 115 ~~G~y~vr~~~~G~w~~VvVDD~lP~~~ 142 (326)
T 2nqa_A 115 YAGIFHFQFWQYGEWVEVVIDDRLPTKN 142 (326)
T ss_dssp CSSEEEEEEECSSSEEEEEEECCEEEET
T ss_pred CCceEEEEEEECCEEEEEEEeCcCcccC
Confidence 4699999999999996 477777654
No 62
>4egu_A Histidine triad (HIT) protein; structural genomics, center for structural genomics of infec diseases, csgid, HIT domain, unknown function; HET: 5GP; 0.95A {Clostridium difficile}
Probab=20.78 E-value=55 Score=26.58 Aligned_cols=34 Identities=15% Similarity=0.170 Sum_probs=29.1
Q ss_pred CCCCCCCChHHHHHhchhhHHHHHHhhhHHHHHHH
Q 012986 77 LSESHVPSMKELSAHGRDDLANIVRRRGYKFIRQL 111 (452)
Q Consensus 77 lp~~~vps~kel~~hgr~dlan~vrrrgyk~i~~l 111 (452)
+|--|++++.+|...-+.+||.+++ ..-++.+.+
T Consensus 44 iPk~H~~~l~dL~~~e~~~l~~~~~-~~~~~~~~~ 77 (119)
T 4egu_A 44 VPKKHYDSLIDIPDKEMDIVSHIHV-VINKIAKEK 77 (119)
T ss_dssp EESSCCSSGGGSCGGGTHHHHHHHH-HHHHHHHHH
T ss_pred EechhhCCHhHCCHhHHHHHHHHHH-HHHHHHHHh
Confidence 5778999999999998999999997 677777765
Done!