Query 012987
Match_columns 452
No_of_seqs 272 out of 2064
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 20:04:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012987.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012987hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o0f_A Putative metal-dependen 100.0 1.1E-61 3.8E-66 484.9 31.5 270 70-368 10-286 (301)
2 2yb1_A Amidohydrolase; HET: AM 100.0 5.7E-52 1.9E-56 412.3 29.5 262 72-360 1-267 (292)
3 3e38_A Two-domain protein cont 100.0 6.3E-28 2.2E-32 245.1 15.5 163 70-345 16-198 (343)
4 2yxo_A Histidinol phosphatase; 99.9 1.7E-23 6E-28 202.0 12.4 188 74-346 1-229 (267)
5 1m65_A Hypothetical protein YC 99.9 5.5E-23 1.9E-27 196.3 13.8 184 72-346 1-197 (245)
6 2anu_A Hypothetical protein TM 99.9 1.5E-22 5.3E-27 196.2 11.8 164 70-356 17-215 (255)
7 3qy7_A Tyrosine-protein phosph 99.7 4.4E-18 1.5E-22 166.7 8.9 176 74-347 1-200 (262)
8 2wje_A CPS4B, tyrosine-protein 99.7 5.7E-18 2E-22 163.3 9.0 175 74-346 5-208 (247)
9 2hnh_A DNA polymerase III alph 99.7 6.6E-17 2.3E-21 181.9 18.9 84 73-159 5-90 (910)
10 2w9m_A Polymerase X; SAXS, DNA 99.7 4.3E-17 1.5E-21 175.8 15.8 211 31-346 285-521 (578)
11 2hpi_A DNA polymerase III alph 99.6 1.5E-15 5E-20 174.2 17.9 99 72-172 5-113 (1220)
12 3b0x_A DNA polymerase beta fam 99.6 3.3E-15 1.1E-19 161.0 16.8 69 72-140 336-418 (575)
13 3f2b_A DNA-directed DNA polyme 99.5 7.4E-14 2.5E-18 158.0 10.5 103 71-175 113-227 (1041)
14 3dcp_A Histidinol-phosphatase; 99.4 1.3E-11 4.3E-16 122.1 16.4 67 73-139 1-97 (283)
15 1v77_A PH1877P, hypothetical p 98.6 2.1E-07 7.2E-12 87.9 9.8 53 74-139 9-62 (212)
16 2y1h_A Putative deoxyribonucle 91.1 0.35 1.2E-05 45.7 6.6 62 72-134 4-65 (272)
17 1zzm_A Putative deoxyribonucle 87.8 0.99 3.4E-05 42.1 7.0 55 72-127 3-57 (259)
18 3rcm_A TATD family hydrolase; 83.2 1.1 3.9E-05 43.6 5.0 54 72-126 1-54 (287)
19 1xwy_A DNAse TATD, deoxyribonu 82.2 1.6 5.4E-05 40.8 5.4 55 72-127 3-57 (264)
20 1yix_A Deoxyribonuclease YCFH; 81.1 1.3 4.5E-05 41.2 4.4 55 72-127 1-58 (265)
21 3gg7_A Uncharacterized metallo 81.0 0.59 2E-05 44.9 2.0 50 73-127 2-51 (254)
22 2gzx_A Putative TATD related D 80.9 2.2 7.5E-05 39.6 5.9 54 73-127 1-54 (265)
23 2xio_A Putative deoxyribonucle 80.0 1.4 4.7E-05 42.7 4.2 55 72-127 1-65 (301)
24 3lmz_A Putative sugar isomeras 67.6 11 0.00038 34.7 7.0 21 278-298 32-52 (257)
25 4gbu_A NADPH dehydrogenase 1; 67.4 7.5 0.00026 39.5 6.2 24 252-275 97-122 (400)
26 3p6l_A Sugar phosphate isomera 67.2 13 0.00044 34.3 7.4 46 277-339 23-82 (262)
27 1j6o_A TATD-related deoxyribon 67.1 2.9 0.0001 39.4 2.9 57 70-127 9-65 (268)
28 3ipw_A Hydrolase TATD family p 63.3 4.8 0.00017 40.0 3.7 56 70-126 24-89 (325)
29 4gxw_A Adenosine deaminase; am 63.0 3.4 0.00011 42.0 2.5 30 71-103 28-57 (380)
30 3rys_A Adenosine deaminase 1; 62.0 3.9 0.00013 40.9 2.8 31 70-103 11-41 (343)
31 3iar_A Adenosine deaminase; pu 61.4 3.9 0.00013 41.3 2.6 30 71-103 5-34 (367)
32 3vni_A Xylose isomerase domain 61.0 10 0.00035 35.5 5.4 44 278-338 19-65 (294)
33 2vc7_A Aryldialkylphosphatase; 60.2 7.1 0.00024 37.2 4.2 64 73-136 17-96 (314)
34 3ngf_A AP endonuclease, family 60.2 14 0.00046 34.4 6.1 43 277-338 24-66 (269)
35 3pao_A Adenosine deaminase; st 60.0 3.9 0.00014 40.5 2.4 29 72-103 10-38 (326)
36 4a3u_A NCR, NADH\:flavin oxido 57.4 10 0.00035 37.9 5.0 23 252-274 80-104 (358)
37 2qul_A D-tagatose 3-epimerase; 55.9 26 0.0009 32.4 7.3 46 278-340 19-67 (290)
38 2q02_A Putative cytoplasmic pr 54.2 27 0.00091 32.0 7.0 15 251-265 19-33 (272)
39 3e2v_A 3'-5'-exonuclease; stru 51.9 16 0.00054 37.4 5.3 56 70-126 10-75 (401)
40 3kws_A Putative sugar isomeras 51.8 24 0.00083 32.8 6.4 43 278-338 40-82 (287)
41 2zvr_A Uncharacterized protein 51.2 15 0.00051 34.5 4.7 45 279-340 44-89 (290)
42 3cqj_A L-ribulose-5-phosphate 51.2 26 0.00089 32.8 6.5 54 277-338 31-84 (295)
43 3f4w_A Putative hexulose 6 pho 49.9 31 0.001 30.9 6.5 65 255-337 42-107 (211)
44 2x7v_A Probable endonuclease 4 49.1 40 0.0014 31.0 7.4 49 270-335 6-62 (287)
45 3cjp_A Predicted amidohydrolas 48.3 29 0.00099 32.1 6.2 35 73-112 3-37 (272)
46 3gka_A N-ethylmaleimide reduct 47.7 29 0.001 34.8 6.5 23 252-274 88-112 (361)
47 1qwg_A PSL synthase;, (2R)-pho 47.1 33 0.0011 32.9 6.4 71 253-338 57-132 (251)
48 1k77_A EC1530, hypothetical pr 46.7 22 0.00077 32.3 5.1 43 277-338 16-58 (260)
49 4ab4_A Xenobiotic reductase B; 46.3 32 0.0011 34.5 6.5 23 252-274 80-104 (362)
50 3ktc_A Xylose isomerase; putat 45.1 22 0.00074 34.3 5.0 44 278-338 35-79 (333)
51 2pgf_A Adenosine deaminase; me 44.8 12 0.00042 37.4 3.1 29 72-103 44-72 (371)
52 3dx5_A Uncharacterized protein 44.7 17 0.00059 33.7 4.0 18 279-296 18-35 (286)
53 1z41_A YQJM, probable NADH-dep 44.6 34 0.0011 33.6 6.3 23 252-274 84-108 (338)
54 1914_A Signal recognition part 43.8 4.4 0.00015 38.6 -0.3 30 7-36 113-142 (232)
55 3qc0_A Sugar isomerase; TIM ba 43.2 8.1 0.00028 35.6 1.4 14 251-264 18-31 (275)
56 3gr7_A NADPH dehydrogenase; fl 42.9 26 0.00089 34.7 5.2 23 252-274 84-108 (340)
57 3aam_A Endonuclease IV, endoiv 42.9 58 0.002 29.8 7.4 20 278-297 16-35 (270)
58 2ob3_A Parathion hydrolase; me 42.8 28 0.00096 33.9 5.4 60 73-132 16-92 (330)
59 3kru_A NADH:flavin oxidoreduct 42.2 35 0.0012 33.9 6.0 23 252-274 82-106 (343)
60 3qxb_A Putative xylose isomera 41.6 38 0.0013 32.1 6.0 50 281-339 40-89 (316)
61 3ngf_A AP endonuclease, family 41.2 66 0.0022 29.6 7.5 48 83-131 18-65 (269)
62 3h4u_A Amidohydrolase; signatu 41.0 46 0.0016 33.3 6.8 63 73-137 88-184 (479)
63 3l5a_A NADH/flavin oxidoreduct 40.7 29 0.00098 35.5 5.2 23 252-274 105-129 (419)
64 3hgj_A Chromate reductase; TIM 40.3 37 0.0013 33.6 5.9 44 253-296 83-172 (349)
65 1i60_A IOLI protein; beta barr 40.1 35 0.0012 31.2 5.3 14 251-264 14-27 (278)
66 4i6k_A Amidohydrolase family p 39.9 25 0.00084 33.4 4.4 56 70-126 23-92 (294)
67 3tva_A Xylose isomerase domain 39.9 37 0.0013 31.6 5.5 49 279-344 24-76 (290)
68 3l5l_A Xenobiotic reductase A; 39.1 36 0.0012 33.9 5.5 23 252-274 81-105 (363)
69 3dz1_A Dihydrodipicolinate syn 38.8 67 0.0023 31.2 7.4 81 264-367 75-159 (313)
70 1icp_A OPR1, 12-oxophytodienoa 38.0 47 0.0016 33.3 6.3 23 252-274 92-116 (376)
71 2qw5_A Xylose isomerase-like T 37.5 52 0.0018 31.4 6.3 50 280-339 35-87 (335)
72 1bf6_A Phosphotriesterase homo 37.4 27 0.00092 32.4 4.1 64 73-136 6-82 (291)
73 3aal_A Probable endonuclease 4 37.1 88 0.003 29.3 7.8 44 278-338 20-72 (303)
74 3k30_A Histamine dehydrogenase 37.0 41 0.0014 36.1 6.0 23 252-274 90-114 (690)
75 2hsa_B 12-oxophytodienoate red 36.8 67 0.0023 32.5 7.2 23 252-274 94-118 (402)
76 3cny_A Inositol catabolism pro 35.2 31 0.001 32.1 4.1 41 250-292 30-71 (301)
77 2d73_A Alpha-glucosidase SUSB; 35.1 1.4E+02 0.0048 32.9 9.7 82 249-348 416-512 (738)
78 3obe_A Sugar phosphate isomera 34.7 44 0.0015 31.8 5.3 13 252-264 37-49 (305)
79 3tjl_A NADPH dehydrogenase; OL 34.6 55 0.0019 33.4 6.2 23 252-274 93-117 (407)
80 2hk0_A D-psicose 3-epimerase; 34.3 30 0.001 32.7 3.9 45 278-340 39-86 (309)
81 1qtw_A Endonuclease IV; DNA re 34.1 73 0.0025 29.1 6.6 44 276-336 12-63 (285)
82 3jr2_A Hexulose-6-phosphate sy 33.9 48 0.0016 30.2 5.1 53 71-130 60-112 (218)
83 1k77_A EC1530, hypothetical pr 33.8 48 0.0016 30.0 5.2 45 87-132 14-58 (260)
84 2gou_A Oxidoreductase, FMN-bin 33.5 75 0.0026 31.6 6.9 23 252-274 82-106 (365)
85 3fkr_A L-2-keto-3-deoxyarabona 33.2 82 0.0028 30.5 7.0 82 263-368 75-162 (309)
86 3lnp_A Amidohydrolase family p 33.0 77 0.0026 31.4 7.0 61 73-137 87-177 (468)
87 3kws_A Putative sugar isomeras 32.8 56 0.0019 30.2 5.6 43 88-130 38-80 (287)
88 3u0h_A Xylose isomerase domain 32.6 17 0.00057 33.5 1.7 17 280-296 20-36 (281)
89 2g0w_A LMO2234 protein; putati 31.6 32 0.0011 32.4 3.6 14 251-264 36-49 (296)
90 2zds_A Putative DNA-binding pr 31.6 1E+02 0.0035 29.0 7.3 52 277-338 16-69 (340)
91 3l23_A Sugar phosphate isomera 31.3 38 0.0013 32.2 4.1 45 278-339 31-78 (303)
92 3kts_A Glycerol uptake operon 30.7 1.4E+02 0.0046 27.4 7.5 63 249-337 39-105 (192)
93 3a24_A Alpha-galactosidase; gl 30.5 1.1E+02 0.0039 33.0 8.0 82 249-348 345-429 (641)
94 4f0r_A 5-methylthioadenosine/S 30.3 1E+02 0.0035 30.3 7.3 62 72-137 64-155 (447)
95 3s5o_A 4-hydroxy-2-oxoglutarat 30.2 1.4E+02 0.0048 28.8 8.1 95 251-368 64-168 (307)
96 2q02_A Putative cytoplasmic pr 30.0 1.1E+02 0.0037 27.7 6.9 46 86-131 17-68 (272)
97 4dyk_A Amidohydrolase; adenosi 29.9 67 0.0023 31.7 5.8 62 72-137 66-157 (451)
98 3vni_A Xylose isomerase domain 29.9 62 0.0021 29.9 5.3 46 87-132 16-65 (294)
99 3ur8_A Glucan endo-1,3-beta-D- 29.8 85 0.0029 31.0 6.4 48 85-137 12-59 (323)
100 4e38_A Keto-hydroxyglutarate-a 29.1 2.1E+02 0.0071 26.8 8.7 46 253-299 24-69 (232)
101 1fa2_A Beta-amylase; TIM barre 28.9 1.3E+02 0.0043 31.6 7.7 60 280-360 38-110 (498)
102 1vyr_A Pentaerythritol tetrani 28.9 69 0.0023 31.9 5.7 23 252-274 82-106 (364)
103 1bxb_A Xylose isomerase; xylos 28.8 70 0.0024 31.6 5.7 44 278-338 35-87 (387)
104 3nqb_A Adenine deaminase 2; PS 28.2 21 0.00072 38.2 1.8 60 72-134 89-154 (608)
105 1wa3_A 2-keto-3-deoxy-6-phosph 28.2 81 0.0028 28.0 5.6 41 88-134 71-111 (205)
106 4dzh_A Amidohydrolase; adenosi 27.8 97 0.0033 31.0 6.7 62 72-137 73-164 (472)
107 1vhc_A Putative KHG/KDPG aldol 27.8 2.5E+02 0.0086 25.8 9.0 48 251-299 5-52 (224)
108 1i60_A IOLI protein; beta barr 27.7 1.2E+02 0.0042 27.3 6.9 45 87-131 13-63 (278)
109 1vkf_A Glycerol uptake operon 27.1 1.2E+02 0.0043 27.6 6.6 61 251-337 43-106 (188)
110 2r14_A Morphinone reductase; H 27.0 72 0.0025 32.0 5.5 23 252-274 86-110 (377)
111 1wdp_A Beta-amylase; (beta/alp 27.0 1.3E+02 0.0043 31.6 7.3 60 280-360 37-109 (495)
112 2f6k_A Metal-dependent hydrola 26.7 43 0.0015 31.3 3.6 35 73-107 2-54 (307)
113 1xim_A D-xylose isomerase; iso 26.3 67 0.0023 31.9 5.1 47 278-341 35-91 (393)
114 1o94_A Tmadh, trimethylamine d 26.2 63 0.0022 35.0 5.2 23 252-274 85-109 (729)
115 2qul_A D-tagatose 3-epimerase; 25.7 83 0.0028 28.9 5.3 45 88-132 17-65 (290)
116 2xfr_A Beta-amylase; hydrolase 25.6 1.4E+02 0.0047 31.6 7.3 60 280-360 35-107 (535)
117 2yxb_A Coenzyme B12-dependent 25.5 1E+02 0.0035 26.8 5.6 49 85-133 53-106 (161)
118 3cqj_A L-ribulose-5-phosphate 25.4 68 0.0023 29.8 4.7 46 86-131 28-83 (295)
119 2z00_A Dihydroorotase; zinc bi 25.3 62 0.0021 31.5 4.6 60 73-132 50-117 (426)
120 3jx9_A Putative phosphoheptose 24.7 37 0.0013 30.5 2.5 25 85-109 87-112 (170)
121 1ps9_A 2,4-dienoyl-COA reducta 24.5 62 0.0021 34.6 4.7 23 252-274 82-106 (671)
122 3ovp_A Ribulose-phosphate 3-ep 24.4 1.1E+02 0.0038 28.3 5.9 58 72-138 64-121 (228)
123 3lmz_A Putative sugar isomeras 24.4 81 0.0028 28.7 4.9 59 70-131 15-78 (257)
124 3em5_A Beta-1,3-glucanase; gly 24.3 1E+02 0.0035 30.4 5.8 46 85-135 11-56 (316)
125 1yx1_A Hypothetical protein PA 24.2 59 0.002 29.8 3.9 16 281-296 28-43 (264)
126 2wvv_A Alpha-L-fucosidase; alp 23.4 80 0.0027 32.5 5.1 52 85-138 75-147 (450)
127 3u0h_A Xylose isomerase domain 23.4 37 0.0013 31.1 2.3 56 73-131 4-64 (281)
128 2eja_A URO-D, UPD, uroporphyri 23.4 77 0.0026 30.7 4.8 43 251-296 217-259 (338)
129 1olt_A Oxygen-independent copr 23.1 1.2E+02 0.0042 30.7 6.5 55 237-295 109-169 (457)
130 3tha_A Tryptophan synthase alp 23.0 95 0.0032 29.6 5.2 79 228-334 59-142 (252)
131 4e38_A Keto-hydroxyglutarate-a 23.0 81 0.0028 29.6 4.6 45 86-135 91-135 (232)
132 3m5v_A DHDPS, dihydrodipicolin 22.9 2.2E+02 0.0076 27.2 7.9 81 265-368 77-160 (301)
133 3mpg_A Dihydroorotase, dhoase; 22.4 91 0.0031 30.7 5.2 38 73-110 54-93 (428)
134 1muw_A Xylose isomerase; atomi 22.0 89 0.003 30.8 5.0 49 278-339 35-88 (386)
135 3inp_A D-ribulose-phosphate 3- 21.9 1.3E+02 0.0043 28.5 5.8 41 255-296 75-116 (246)
136 2g0w_A LMO2234 protein; putati 21.9 1.2E+02 0.004 28.4 5.6 46 87-132 35-86 (296)
137 3flu_A DHDPS, dihydrodipicolin 21.8 2.2E+02 0.0074 27.3 7.6 94 251-367 57-158 (297)
138 2ood_A BLR3880 protein; PSI-II 21.8 81 0.0028 31.7 4.7 41 94-136 124-166 (475)
139 3cny_A Inositol catabolism pro 21.7 1.1E+02 0.0037 28.2 5.3 45 86-132 29-73 (301)
140 3daq_A DHDPS, dihydrodipicolin 21.7 1.7E+02 0.0057 28.0 6.7 83 263-368 69-154 (292)
141 2dvt_A Thermophilic reversible 21.5 2E+02 0.0069 26.8 7.3 15 324-338 149-163 (327)
142 2ehh_A DHDPS, dihydrodipicolin 21.5 2.5E+02 0.0084 26.8 7.9 37 264-300 68-106 (294)
143 2yxg_A DHDPS, dihydrodipicolin 21.5 2.2E+02 0.0075 27.1 7.5 37 264-300 68-106 (289)
144 2zds_A Putative DNA-binding pr 21.3 1.9E+02 0.0064 27.1 7.0 44 87-130 14-67 (340)
145 3cpr_A Dihydrodipicolinate syn 21.2 2.5E+02 0.0084 27.0 7.9 81 264-367 84-167 (304)
146 3l21_A DHDPS, dihydrodipicolin 21.2 1.8E+02 0.0061 28.0 6.9 82 263-367 82-166 (304)
147 3si9_A DHDPS, dihydrodipicolin 21.0 1.7E+02 0.0057 28.5 6.6 83 263-368 89-174 (315)
148 3t7v_A Methylornithine synthas 20.8 1.4E+02 0.0047 28.9 6.0 40 253-294 128-167 (350)
149 1xla_A D-xylose isomerase; iso 20.8 98 0.0033 30.7 5.0 49 278-339 35-88 (394)
150 1q6o_A Humps, 3-keto-L-gulonat 20.8 1.7E+02 0.0057 26.3 6.3 53 71-130 57-109 (216)
151 1f6k_A N-acetylneuraminate lya 20.6 2.2E+02 0.0076 27.1 7.4 83 263-368 71-156 (293)
152 3qze_A DHDPS, dihydrodipicolin 20.5 2.5E+02 0.0085 27.2 7.8 95 251-368 73-175 (314)
153 2d59_A Hypothetical protein PH 20.5 1.1E+02 0.0038 25.9 4.7 38 91-131 91-128 (144)
154 2gwg_A 4-oxalomesaconate hydra 20.4 3.2E+02 0.011 26.0 8.6 67 256-337 96-176 (350)
155 3tak_A DHDPS, dihydrodipicolin 20.3 2.2E+02 0.0077 27.0 7.3 94 251-367 51-152 (291)
156 3na8_A Putative dihydrodipicol 20.2 1.7E+02 0.0059 28.3 6.6 81 263-366 91-174 (315)
No 1
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=100.00 E-value=1.1e-61 Score=484.93 Aligned_cols=270 Identities=30% Similarity=0.463 Sum_probs=247.9
Q ss_pred CCceEEceeeeCCCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeEEEEEEEEeEecCCCCCCCC
Q 012987 70 DNNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEISTIFCQRGSESEE 149 (452)
Q Consensus 70 ~~~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI~GiEis~~~~~~~~~~g~ 149 (452)
...|++|||+||+||||.++|++++++|++.|+++|||||||++.|+.++.+++++.||.+|+|+||++.+. +.
T Consensus 10 ~m~~~~DLH~Hs~~SDG~~~~~elv~~A~~~Gl~~iaiTDH~~~~g~~~~~~~~~~~gi~~i~GvEis~~~~------~~ 83 (301)
T 3o0f_A 10 PPAQGWDIHCHTVFSDGTETPRTLVEQARKLGLHGVAIADHDTTAGWDEATEASEEIGLPLLLGTEITAVDE------DV 83 (301)
T ss_dssp CCSSSEEEEECCTTTTCSSCHHHHHHHHHHTTCSEEEECCBTCCTTHHHHHHHHHHHTCCEEEEEEEEEEET------TE
T ss_pred cccceEEeeECCCCCCCCCCHHHHHHHHHHcCCCEEEEcCCCccccHHHHHHHHHhcCCEEEEEEEEEEEeC------Cc
Confidence 446799999999999999999999999999999999999999999999999999999999999999999985 56
Q ss_pred cEEEEEEecCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCC--CCCCHHHHHHHHHHcCcc
Q 012987 150 PVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKG--VAPGRLHVARAMVEAGHV 227 (452)
Q Consensus 150 ~vHILgy~~d~~~~~~~~L~~~L~~ir~~R~~R~~~~v~~L~~~Gi~i~~e~v~~~a~~~--~~~gr~hia~aLv~~G~v 227 (452)
.+|||+|+++. ..+.|.++|+.+|+.|.+|+++|+++|++. ++++||++.++++.+ ..+||||||++|+++||+
T Consensus 84 ~vHiL~~~~d~---~~~~l~~~l~~~~~~R~~R~~~i~~~L~~~-~~i~~e~v~~~a~~~~~~~igR~HiA~~Lv~~G~~ 159 (301)
T 3o0f_A 84 SVHMLAFQYDP---SNEHISSMFANTRAARLRRTKRMVERLSQD-FPITWDDVLAQVKEGERTTIGRPHIADALVAAGVY 159 (301)
T ss_dssp EEEEEEESCCT---TCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSCCHHHHHTTCTTGGGSCCCHHHHHHHHHHTTSC
T ss_pred eEEEEEEcCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHhcCCCCCCcCHHHHHHHHHHcCCC
Confidence 89999999874 358899999999999999999999999999 999999998876542 468999999999999999
Q ss_pred ccHHHHHHHHhhcCCCccccCCCCCHHHHHHHHHHcCCEEEEeCCCCCC-----CcHHHHHHHHHcCCcEEEEeCCCCCh
Q 012987 228 ENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALK-----NPAAIIRKLKDVGLHGLEVYRSDGKL 302 (452)
Q Consensus 228 ~~~~~af~~yL~~g~p~yv~~~~~~~eeaI~~I~~aGGvaVLAHP~~~~-----~~~~li~~l~~~GldGIEV~~~~~~~ 302 (452)
.+..++|++||++|+|+|||..+++++|+|++|+++||++|||||+++. ...+++.+|++.|+|||||+|++++.
T Consensus 160 ~~~~~aF~~~l~~g~~~yV~~~~~~~~eaI~~I~~aGGvaVLAHP~r~~~~r~~~~~~~l~~l~~~GldgIEv~~~~~~~ 239 (301)
T 3o0f_A 160 ETRSDAFADAVSAKSKYYIPTPSPSTHEVIAAVKGAGGVVVAAHAGDPQRNRRLLSDEQLDAMIADGLDGLEVWHRGNPP 239 (301)
T ss_dssp SSHHHHHTTTTSTTSTTCCCCCCCBHHHHHHHHHHTTCEEEECSTTCTTTCSSCCCHHHHHHHHHHTCCEEEEESTTSCH
T ss_pred CCHHHHHHHHHcCCCccccCccCCCHHHHHHHHHHCCCEEEecChhhhccccccCcHHHHHHHHHCCCCEEEEeCCCCCH
Confidence 9999999999999999999999999999999999999999999997753 34678999999999999999999998
Q ss_pred hhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeeeccCCCCCCCCCCccCCCccCChhHHHHHhc
Q 012987 303 VDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGGSDYHGRGGHGESELGSVKLPVLVLNDFLK 368 (452)
Q Consensus 303 ~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgGSDfHg~~~~~~~~lG~~~~p~~~~~~~~~ 368 (452)
++.+ ++.++|+++||++||||||||+.+ +..||.+.+|++.++.|..
T Consensus 240 ~~~~-----------------~~~~lA~~~gL~~tgGSD~Hg~~~--~~~lG~~~~~~~~~~~l~~ 286 (301)
T 3o0f_A 240 EQRE-----------------RLLTIAARHDLLVTGGSDWHGKGK--PNGLGENLTDDDTVREILC 286 (301)
T ss_dssp HHHH-----------------HHHHHHHHHTCEEEECCCBCGGGS--SCCTTSSCBCHHHHHHHHH
T ss_pred HHHH-----------------HHHHHHHHcCCceEEEcCCCCCCC--CCcCCCcCCCHHHHHHHHH
Confidence 8765 789999999999999999999854 4789999999887666553
No 2
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=100.00 E-value=5.7e-52 Score=412.34 Aligned_cols=262 Identities=32% Similarity=0.483 Sum_probs=234.1
Q ss_pred ceEEceeeeCCCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeEEEEEEEEeEecCCCCCCCCcE
Q 012987 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEISTIFCQRGSESEEPV 151 (452)
Q Consensus 72 ~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI~GiEis~~~~~~~~~~g~~v 151 (452)
++++|||+||.+|||..+|++++++|++.|++.|||||||++.|+.++.+++++.||++|+|+|+++.+. +..+
T Consensus 1 M~~~DLH~Ht~~SDg~~~~~elv~~A~~~Gl~~iaiTDH~~~~g~~~~~~~~~~~gi~vi~G~Ei~~~~~------~~~~ 74 (292)
T 2yb1_A 1 MANIDLHFHSRTSDGALTPTEVIDRAAARAPALLALTDHDCTGGLAEAAAAAARRGIPFLNGVEVSVSWG------RHTV 74 (292)
T ss_dssp -CCEECCBCCTTTTCSSCHHHHHHHHHTTCCSEEEECCBTCCTTHHHHHHHHHHTTCCEEEEEEEEEEET------TEEE
T ss_pred CCccccccCCCccCCCCCHHHHHHHHHHCCCCEEEEecCCccccHHHHHHHHHHcCCEEEEEEEEEEecC------Ccee
Confidence 4689999999999999999999999999999999999999999999999998889999999999999874 4578
Q ss_pred EEEEEecCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCCHHHHHHHHHHcCccccHH
Q 012987 152 HILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRLHVARAMVEAGHVENLK 231 (452)
Q Consensus 152 HILgy~~d~~~~~~~~L~~~L~~ir~~R~~R~~~~v~~L~~~Gi~i~~e~v~~~a~~~~~~gr~hia~aLv~~G~v~~~~ 231 (452)
|+|+|+++. ..+.+.+++..+++.|.+|+++|+++|++.|++++++++..+++++..+||||||++|++.|++.+..
T Consensus 75 hil~~~~d~---~~~~l~~~~~~~~~~r~~r~~~~~~~l~~~g~~~~~~~v~~~a~~~~~igr~H~a~~lv~~g~~~~~~ 151 (292)
T 2yb1_A 75 HIVGLGIDP---AEPALAAGLKSIREGRLERARQMGASLEAAGIAGCFDGAMRWCDNPEMISRTHFARHLVDSGAVKDMR 151 (292)
T ss_dssp EEEEESCCT---TCHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCTTHHHHHHTTCSSGGGCCHHHHHHHHHHTTSSSSHH
T ss_pred EEEEEecCc---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCHHHHHHhccCCCCcCHHHHHHHHHHcCCcCCHH
Confidence 999999874 23679999999999999999999999999999999999988765555689999999999999999999
Q ss_pred HHHHHHhhcCCCccccCCCCCHHHHHHHHHHcCCEEEEeCCCCCCCc----HHHHHHHHHcCCcEEEEeCCCCChhhhhh
Q 012987 232 QAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNP----AAIIRKLKDVGLHGLEVYRSDGKLVDVNF 307 (452)
Q Consensus 232 ~af~~yL~~g~p~yv~~~~~~~eeaI~~I~~aGGvaVLAHP~~~~~~----~~li~~l~~~GldGIEV~~~~~~~~~~~~ 307 (452)
++|++||+.++|+|++..+++++++|++|+.+||++|+|||+++... ..++++|++.|++||||+++.++..+..
T Consensus 152 ~~f~~yl~~~~~~~v~~~~~~~~~~i~~i~~~Gg~~VlAHP~r~~~~~~~~~~~l~~l~~~g~~giEv~~~~~~~~~~~- 230 (292)
T 2yb1_A 152 TVFRKYLTPGKPGYVSHQWASLEDAVGWIVGAGGMAVIAHPGRYDMGRTLIERLILDFQAAGGQGIEVASGSHSLDDMH- 230 (292)
T ss_dssp HHHHHSSSTTSTTCCCCCCBCHHHHHHHHHHTTCEEEECCGGGSSCCHHHHHHHHHHHHHTTCCEEEEEETTCCHHHHH-
T ss_pred HHHHHHHccCCceeccCCCCCHHHHHHHHHHcCCEEEEECcCccccchhhHHHHHHHHHhCCCCEEEEeCCCCCHHHHH-
Confidence 99999999999999999999999999999999999999999987632 4677888899999999999998866443
Q ss_pred hhhhhhHHHHHhhHHHHHHHHHHHcCCeeeeccCCCCCCCCCCccCCCcc-CCh
Q 012987 308 LEKIDNFLLLLCLRQITYTDLADTYGLLKLGGSDYHGRGGHGESELGSVK-LPV 360 (452)
Q Consensus 308 l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgGSDfHg~~~~~~~~lG~~~-~p~ 360 (452)
.+.++|+++||++|+|||||++.++ +..+|.+. +|+
T Consensus 231 ----------------~~~~~a~~~gl~~t~GSDaH~~~~~-~~~lG~~~~~~~ 267 (292)
T 2yb1_A 231 ----------------KFALHADRHGLYASSGSDFHAPGEG-GRDVGHTEDLPP 267 (292)
T ss_dssp ----------------HHHHHHHHHTCEEEEECCBCSTTC----CTTCCCCCCT
T ss_pred ----------------HHHHHHHHcCCceEEeeCCCCcCCC-CCcCCCCCCChH
Confidence 6889999999999999999998643 56899875 444
No 3
>3e38_A Two-domain protein containing predicted PHP-like dependent phosphoesterase; structural genomics; 2.20A {Bacteroides vulgatus atcc 8482}
Probab=99.95 E-value=6.3e-28 Score=245.10 Aligned_cols=163 Identities=25% Similarity=0.307 Sum_probs=133.5
Q ss_pred CCceEEceeeeCCCCCCCCCHHHHHHHHHHcCCcEEEEecC------------CCCCCHHHHHHHHHhCCCeEEEEEEEE
Q 012987 70 DNNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDH------------DTMSGIPEAIETARRFGMKIIPGVEIS 137 (452)
Q Consensus 70 ~~~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDH------------dt~~g~~~~~~~a~~~gi~vI~GiEis 137 (452)
..||++|||+||.||||..+|++++++|++.|+++|||||| |++.++.++.+.+++.||.+|||+||+
T Consensus 16 ~~~~~~DlH~Ht~~SDg~~~~~elv~~A~~~Gl~~iaiTDH~~~~~~~~~~~~d~~~g~~~~~~~a~~~gi~vi~G~Ei~ 95 (343)
T 3e38_A 16 YTTLKCDFHMHSVFSDGLVWPTVRVDEAYRDGLDAISLTEHIEYRPHKQDVVSDHNRSFDLCREQAEKLGILLIKGSEIT 95 (343)
T ss_dssp CEEEEEECCBCCTTTTCSBCHHHHHHHHHHTTCSEECCEEESSCCTTTTTBCCCTTHHHHHHHHHHHHHTCEECCEEEEE
T ss_pred CCEEEEECCCCCCCCCCCCCHHHHHHHHHHcCCCEEEECCCCcccccccccchhHHHHHHHHHHHHHhCCCEEEEEEEEE
Confidence 34999999999999999999999999999999999999999 566788889888888999999999999
Q ss_pred eEecCCCCCCCCcEEEEEEecCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCCHHHH
Q 012987 138 TIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRLHV 217 (452)
Q Consensus 138 ~~~~~~~~~~g~~vHILgy~~d~~~~~~~~L~~~L~~ir~~R~~R~~~~v~~L~~~Gi~i~~e~v~~~a~~~~~~gr~hi 217 (452)
+.+ +.+|+|+|+.+.. .
T Consensus 96 ~~~--------~~gHiL~l~~~~~---~---------------------------------------------------- 112 (343)
T 3e38_A 96 RAM--------APGHFNAIFLSDS---N---------------------------------------------------- 112 (343)
T ss_dssp CST--------TTCEEEEESCSCS---G----------------------------------------------------
T ss_pred EcC--------CCcEEEEEeCCCC---C----------------------------------------------------
Confidence 863 3689999987510 0
Q ss_pred HHHHHHcCccccHHHHHHHHhhcCCCccccCCCCCHHHHHHHHHHcCCEEEEeCCCCCCC-------cHHHHHHH-HHcC
Q 012987 218 ARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKN-------PAAIIRKL-KDVG 289 (452)
Q Consensus 218 a~aLv~~G~v~~~~~af~~yL~~g~p~yv~~~~~~~eeaI~~I~~aGGvaVLAHP~~~~~-------~~~li~~l-~~~G 289 (452)
+....+++++++.|++.||++|+|||++... ... +.++ ...+
T Consensus 113 -----------------------------~~~~~~~~eli~~v~~~Ggl~iiAHP~r~~~~~~g~~~~~~-~~e~l~~~~ 162 (343)
T 3e38_A 113 -----------------------------PLEQKDYKDAFREAKKQGAFMFWNHPGWDSQQPDTTKWWPE-HTALYQEGC 162 (343)
T ss_dssp -----------------------------GGCCSSHHHHHHHHHHTTCEEEECCTTCTTTSSSCCCCCHH-HHHHHHTTC
T ss_pred -----------------------------CCcccCHHHHHHHHHHCCCEEEEeCCCCcccCccccccccc-hHHHhcccC
Confidence 0012578999999999999999999998531 111 3333 3479
Q ss_pred CcEEEEeCCCCChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeeeccCCCCC
Q 012987 290 LHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGGSDYHGR 345 (452)
Q Consensus 290 ldGIEV~~~~~~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgGSDfHg~ 345 (452)
+|||||||+....+ +..++|+.++|..+||||+|++
T Consensus 163 iDaIEv~N~~~~n~--------------------~A~~la~~~~l~~~~GSDaH~~ 198 (343)
T 3e38_A 163 MHGIEVANGHLYMP--------------------EAIQWCLDKNLTMIGTSDIHQP 198 (343)
T ss_dssp CSEEEEEETTEECT--------------------HHHHHHHHHTCEEEEECCBCSC
T ss_pred ccEEEEcCCCCccH--------------------HHHHHHhhCCCceEeECCCCCC
Confidence 99999999864211 3567899999999999999997
No 4
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=99.89 E-value=1.7e-23 Score=201.98 Aligned_cols=188 Identities=19% Similarity=0.212 Sum_probs=123.4
Q ss_pred EEceeeeCCCC-CCCCCHHHHHHHHHHcCCcEEEEecCCCCC-------C---------HHHHHHHHHhC-CCeEEEEEE
Q 012987 74 VFELHSHSNFS-DGYLSPSKLVERAHCNGVKVLALTDHDTMS-------G---------IPEAIETARRF-GMKIIPGVE 135 (452)
Q Consensus 74 ~vDLH~HT~~S-DG~~sp~elv~~A~~~Gl~~iaITDHdt~~-------g---------~~~~~~~a~~~-gi~vI~GiE 135 (452)
++||||||.+| ||..+|++++++|++.|++.||||||+++. + +.++.++.+++ +|.+++|+|
T Consensus 1 ~~DlH~Ht~~S~DG~~~~ee~v~~A~~~Gl~~iaiTDH~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~i~i~~G~E 80 (267)
T 2yxo_A 1 MVDSHVHTPLCGHAEGHPEAYLEEARAKGLKGVVFTDHSPMPPWYDPESRMRLEALPFYLLALERVRERAQDLYVGIGLE 80 (267)
T ss_dssp CEEEEECCGGGSSCCSCHHHHHHHHHHTTCSEEEEEEECCCCTTSSGGGSCCGGGHHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred CCccCcCcCCCCCCCCCHHHHHHHHHHcCCCEEEEcCCCCCCcccCccccccHHHHHHHHHHHHHHHHHhcCCcEEEEEE
Confidence 48999999999 999999999999999999999999999987 3 33444555554 999999999
Q ss_pred EEeEecCCCCCCCCcEEEEEEecCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCCHH
Q 012987 136 ISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRL 215 (452)
Q Consensus 136 is~~~~~~~~~~g~~vHILgy~~d~~~~~~~~L~~~L~~ir~~R~~R~~~~v~~L~~~Gi~i~~e~v~~~a~~~~~~gr~ 215 (452)
+++..+ + + +.+.++ |...+++. .+++.
T Consensus 81 i~~~~~----------~-----~-------~~~~~~------------------l~~~~~d~-------------vi~s~ 107 (267)
T 2yxo_A 81 ADFHPG----------T-----E-------GFLAQL------------------LRRYPFDY-------------VIGSV 107 (267)
T ss_dssp EECCTT----------C-----H-------HHHHHH------------------HHSSCCSC-------------EEEEC
T ss_pred eccCCC----------c-----H-------HHHHHH------------------HHhCCCCE-------------EEEee
Confidence 998531 0 0 111111 22211110 12233
Q ss_pred HHHHHHHHcCccc----------cHHHHHHHHhhcCCCccccCCCCCHHHHHHHHHHcCCEEEEeCCCCCC---C-----
Q 012987 216 HVARAMVEAGHVE----------NLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALK---N----- 277 (452)
Q Consensus 216 hia~aLv~~G~v~----------~~~~af~~yL~~g~p~yv~~~~~~~eeaI~~I~~aGGvaVLAHP~~~~---~----- 277 (452)
|++.. .++.. +..+++..| .++++++|+. ||++|+|||.++. .
T Consensus 108 H~~~~---~~~~~~~~~~~~~~~~~~~~~~~y---------------~~~~~~~i~~-g~~~vlaHp~~~~~~~~~~~~~ 168 (267)
T 2yxo_A 108 HYLGA---WPLDHPDHQEEYAWRDLKEVFRAY---------------FQEVEKAARS-GLFHAIGHLDLPKKFGHRLPEE 168 (267)
T ss_dssp CCBTT---BCTTCGGGGGGGGGSCHHHHHHHH---------------HHHHHHHHTS-SCCSEESCTTGGGTTSCCCCHH
T ss_pred EecCC---cCCCcHHHHHHHhcCCHHHHHHHH---------------HHHHHHHHhc-CCCCEEeCccHHHHhCCCCChH
Confidence 32211 01111 123333333 3788999986 9999999998632 1
Q ss_pred -----cHHHHHHHHHcCCcEEEEeCCCCChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeeeccCCCCCC
Q 012987 278 -----PAAIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGGSDYHGRG 346 (452)
Q Consensus 278 -----~~~li~~l~~~GldGIEV~~~~~~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgGSDfHg~~ 346 (452)
...+++.+++.| .+|||.++........ . .....+.++|.++|+.+|+|||+|++.
T Consensus 169 ~~~~~~~~~l~~~~~~g-~~iEvn~~~~~~~~~~----~--------~~~~~~~~~~~~~g~~~~~gSDaH~~~ 229 (267)
T 2yxo_A 169 ALLELAEPALRAVAEAG-LFLDVNTAGLRRPAKE----V--------YPAPALLRRARELGIGLVLGSDAHRPE 229 (267)
T ss_dssp HHHHHHHHHHHHHHHHT-CEEEEEGGGGGSTTCS----C--------BSCHHHHHHHHHHTCCEEEECCBSSGG
T ss_pred HHHHHHHHHHHHHHHcC-CEEEEEchHhcCCCCC----C--------CCCHHHHHHHHHcCCCEEEecCCCCHH
Confidence 124577788888 6999977643211000 0 001268899999999999999999973
No 5
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=99.89 E-value=5.5e-23 Score=196.34 Aligned_cols=184 Identities=21% Similarity=0.230 Sum_probs=119.3
Q ss_pred ceEEceeeeCCCCC-CCCCHHHHHHHHHHcCCcEEEEecCCC-CCCHHH--HH---HHH--HhCCCeEEEEEEEEeEecC
Q 012987 72 NVVFELHSHSNFSD-GYLSPSKLVERAHCNGVKVLALTDHDT-MSGIPE--AI---ETA--RRFGMKIIPGVEISTIFCQ 142 (452)
Q Consensus 72 ~~~vDLH~HT~~SD-G~~sp~elv~~A~~~Gl~~iaITDHdt-~~g~~~--~~---~~a--~~~gi~vI~GiEis~~~~~ 142 (452)
+|++||||||.+|| |..+|++++++|++.|++.||||||++ +.+... .. +.+ +..||.+++|+|+++...
T Consensus 1 m~~~DlH~Ht~~Sd~g~~~~~e~v~~A~~~Gl~~iaiTDH~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~G~Ei~~~~~- 79 (245)
T 1m65_A 1 MYPVDLHMHTVASTHAYSTLSDYIAQAKQKGIKLFAITDHGPDMEDAPHHWHFINMRIWPRVVDGVGILRGIEANIKNV- 79 (245)
T ss_dssp -CCEECCBCCTTSTTCCCCHHHHHHHHHHHTCCEEEEEEECTTSTTCCCTHHHHGGGGSCSEETTEEEEEEEEEEBCST-
T ss_pred CCceEeCcCCCCCCCCCCcHHHHHHHHHHCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHhcCCCeEEEEEEeeeeCC-
Confidence 46899999999994 777999999999999999999999998 655321 11 111 225899999999998531
Q ss_pred CCCCCCCcEEEEEEecCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCCHHHHHHHHH
Q 012987 143 RGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRLHVARAMV 222 (452)
Q Consensus 143 ~~~~~g~~vHILgy~~d~~~~~~~~L~~~L~~ir~~R~~R~~~~v~~L~~~Gi~i~~e~v~~~a~~~~~~gr~hia~aLv 222 (452)
..+ ++. ...+ ++.| .+- ++..|
T Consensus 80 -------~~~-----~~~----~~~~------------------~~~l---d~v---------------i~~~h------ 101 (245)
T 1m65_A 80 -------DGE-----IDC----SGKM------------------FDSL---DLI---------------IAGFH------ 101 (245)
T ss_dssp -------TCC-----BSC----CHHH------------------HHHC---SEE---------------EEECC------
T ss_pred -------CCc-----hhH----HHHH------------------HhhC---CEE---------------EEeec------
Confidence 011 111 0111 1111 000 00000
Q ss_pred HcCccccHHHHHHHHhhcCCCccccCCC-CCHHHHHHHHHHcCCEEEEeCCCCCCC---cHHHHHHHHHcCCcEEEEeCC
Q 012987 223 EAGHVENLKQAFARYLYDGGPAYSTGSE-PLAEVAVQLIHRTGGLAVLAHPWALKN---PAAIIRKLKDVGLHGLEVYRS 298 (452)
Q Consensus 223 ~~G~v~~~~~af~~yL~~g~p~yv~~~~-~~~eeaI~~I~~aGGvaVLAHP~~~~~---~~~li~~l~~~GldGIEV~~~ 298 (452)
.++|.+... ..++++++.|+ +||++|+|||+++.. ...+++.+++.| .+||+.++
T Consensus 102 -------------------~~~~~~~~~~~~~~~~~~~i~-~g~~~vlaHp~~~~~~~~~~~~~~~~~~~g-~~iEvn~~ 160 (245)
T 1m65_A 102 -------------------EPVFAPHDKATNTQAMIATIA-SGNVHIISHPGNPKYEIDVKAVAEAAAKHQ-VALEINNS 160 (245)
T ss_dssp -------------------TTTSCCCCHHHHHHHHHHHHH-TSCCSEECCTTCTTSCCCHHHHHHHHHHHT-CEEEEETT
T ss_pred -------------------CCccCcchHHHHHHHHHHHHh-CCCCCEEECCCCccchhHHHHHHHHHHHcC-CEEEEECC
Confidence 011222111 34678899898 999999999987542 356788889999 79999998
Q ss_pred CCChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeeeccCCCCCC
Q 012987 299 DGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGGSDYHGRG 346 (452)
Q Consensus 299 ~~~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgGSDfHg~~ 346 (452)
........ .. .....+.++|+++|+.+|+|||+|++.
T Consensus 161 ~~~~~~~g---~~--------~~~~~~~~~~~~~g~~~~~gSDaH~~~ 197 (245)
T 1m65_A 161 SFLHSRKG---SE--------DNCREVAAAVRDAGGWVALGSDSHTAF 197 (245)
T ss_dssp C---------------------CHHHHHHHHHHHTCCEEEECCBSSGG
T ss_pred CCcccCCC---CC--------CchHHHHHHHHHcCCEEEEECCCCChH
Confidence 76300000 00 011267889999999999999999973
No 6
>2anu_A Hypothetical protein TM0559; predicted metal-dependent phosphoesterase (PHP famil structural genomics, joint center for structural genomics; 2.40A {Thermotoga maritima} SCOP: c.6.3.1
Probab=99.88 E-value=1.5e-22 Score=196.25 Aligned_cols=164 Identities=24% Similarity=0.337 Sum_probs=120.4
Q ss_pred CCceEEceeeeCCCCCCCCCHHHHHHHHHHcCCcEEEEecCCC----CCC---------------HHH--------HHHH
Q 012987 70 DNNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT----MSG---------------IPE--------AIET 122 (452)
Q Consensus 70 ~~~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt----~~g---------------~~~--------~~~~ 122 (452)
..|+++|||+||.+|||..+|++++++|++.|++.||||||+. +.+ +.+ +.++
T Consensus 17 ~~~~~~DlH~Ht~~SDg~~t~ee~v~~A~~~Gl~~i~iTDH~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 96 (255)
T 2anu_A 17 TEWLLCDFHVHTNMSDGHLPLGEVVDLFGKHGVDVVSITDHIVDRRTLEQRKRNGEPLGAITEDKFQDYLKRLWREQKRA 96 (255)
T ss_dssp CEEEEEEEEECCTTTTCSSCHHHHHHHHHHTTCSEEEEEEEEECHHHHHHHHHTTCCCCSCCSTTHHHHHHHHHHHHHHH
T ss_pred CceEEEEEeecCCCcCCCCCHHHHHHHHHHCCCCEEEEcCCCCcccccccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 4589999999999999999999999999999999999999972 322 111 2223
Q ss_pred HHhCCCeEEEEEEEEeEecCCCCCCCCcEEEEEEecCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHH
Q 012987 123 ARRFGMKIIPGVEISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHV 202 (452)
Q Consensus 123 a~~~gi~vI~GiEis~~~~~~~~~~g~~vHILgy~~d~~~~~~~~L~~~L~~ir~~R~~R~~~~v~~L~~~Gi~i~~e~v 202 (452)
++..+|.+++|+|+++. +..+|+|+++.+.
T Consensus 97 ~~~~~i~v~~G~Ei~~~--------~~~~h~l~~~~~~------------------------------------------ 126 (255)
T 2anu_A 97 WEEYGMILIPGVEITNN--------TDLYHIVAVDVKE------------------------------------------ 126 (255)
T ss_dssp HHHHSCEEEEEEEEEET--------TTTEEEEEESCCS------------------------------------------
T ss_pred ccccCcEEEEEEEEeeC--------CCCeeEEEecccc------------------------------------------
Confidence 34569999999999984 2469999997531
Q ss_pred HHHhCCCCCCCHHHHHHHHHHcCccccHHHHHHHHhhcCCCccccCCCCCHHHHHHHHHHcCCEEEEeCCCCCCCcH---
Q 012987 203 AKIAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNPA--- 279 (452)
Q Consensus 203 ~~~a~~~~~~gr~hia~aLv~~G~v~~~~~af~~yL~~g~p~yv~~~~~~~eeaI~~I~~aGGvaVLAHP~~~~~~~--- 279 (452)
|+ + ....++++++.++..|+++|+|||+++....
T Consensus 127 ----------------------------------~~--------~-~~~~~~~~l~~i~~~g~~~ilaHp~~~~~~~~~~ 163 (255)
T 2anu_A 127 ----------------------------------YV--------D-PSLPVEEIVEKLKEQNALVIAAHPDRKKQDEEHL 163 (255)
T ss_dssp ----------------------------------CC--------C-TTSCHHHHHHHHHHTTCEEEECCCCTTC-----C
T ss_pred ----------------------------------cc--------C-CCCCHHHHHHHHHHCCCeEEEeCCCccccccccc
Confidence 00 0 0136789999999999999999998764321
Q ss_pred --HHH---HHHHHcCCcEEEEeCCCCChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeeeccCCCCCCCCCCccCC
Q 012987 280 --AII---RKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGGSDYHGRGGHGESELG 354 (452)
Q Consensus 280 --~li---~~l~~~GldGIEV~~~~~~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgGSDfHg~~~~~~~~lG 354 (452)
... +.+ ...+++||+.++.. +..+|+++|+.+++|||+|.+. .+|
T Consensus 164 ~~~~~~~~~~~-~~~~~aiEin~~~~------------------------~~~~~~~~g~~~~~gSDAH~~~-----~ig 213 (255)
T 2anu_A 164 SWYLWANMERF-KDTFDAWEIANRDD------------------------LFNSVGVKKYRYVANSDFHELW-----HVY 213 (255)
T ss_dssp CCHHHHSTTTT-TTTCSEEEEEETTE------------------------ECHHHHHTTCCEEEECCBCSGG-----GGS
T ss_pred cccccchhhhh-hccCcEEEEcCCCc------------------------hhhHHHHcCCceEeccCCCCCc-----ccC
Confidence 011 111 23689999998641 1125778999999999999973 466
Q ss_pred Cc
Q 012987 355 SV 356 (452)
Q Consensus 355 ~~ 356 (452)
..
T Consensus 214 ~~ 215 (255)
T 2anu_A 214 SW 215 (255)
T ss_dssp SE
T ss_pred Cc
Confidence 53
No 7
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=99.73 E-value=4.4e-18 Score=166.71 Aligned_cols=176 Identities=18% Similarity=0.210 Sum_probs=116.4
Q ss_pred EEceeeeCCC--CCCCCCHHH---HHHHHHHcCCcEEEEecCCCCCC-----------HHHHHHHHHh--CCCeEEEEEE
Q 012987 74 VFELHSHSNF--SDGYLSPSK---LVERAHCNGVKVLALTDHDTMSG-----------IPEAIETARR--FGMKIIPGVE 135 (452)
Q Consensus 74 ~vDLH~HT~~--SDG~~sp~e---lv~~A~~~Gl~~iaITDHdt~~g-----------~~~~~~~a~~--~gi~vI~GiE 135 (452)
++|+||||.+ |||..++++ ++++|.+.|++.|++|||..... +.++.+..++ .+|.+++|+|
T Consensus 1 m~D~H~H~~~~~ddG~~~~~~sl~~~~~a~~~G~~~i~~T~H~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~i~I~~G~E 80 (262)
T 3qy7_A 1 MIDIHCHILPAMDDGAGDSADSIEMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAADQLNKRLIKEDIPLHVLPGQE 80 (262)
T ss_dssp CEESSBCCSTTSSSSCSSHHHHHHHHHHHHHTTCCEEECCCBSEETTEECCHHHHHHHHHHHHHHHHHTTCCCEEECCCE
T ss_pred CEEEeecCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEecCeE
Confidence 5899999998 599999997 99999999999999999964221 2223333333 4799999999
Q ss_pred EEeEecCCCCCCCCcEEEEEEecCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCCHH
Q 012987 136 ISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRL 215 (452)
Q Consensus 136 is~~~~~~~~~~g~~vHILgy~~d~~~~~~~~L~~~L~~ir~~R~~R~~~~v~~L~~~Gi~i~~e~v~~~a~~~~~~gr~ 215 (452)
+..... .... +.+..+ ..++ +.
T Consensus 81 v~~~~~----------------------~~~~----------------------l~~~~~-~~l~------~~------- 102 (262)
T 3qy7_A 81 IRIYGE----------------------VEQD----------------------LAKRQL-LSLN------DT------- 102 (262)
T ss_dssp EECCTT----------------------HHHH----------------------HHTTCS-CCGG------GS-------
T ss_pred Eecchh----------------------HHHH----------------------HhcCCC-cEEC------Cc-------
Confidence 987421 0011 111000 0000 00
Q ss_pred HHHHHHHHcCccccHHHHHHHHhhcCCCccccCCCCCHHHHHHHHHHcCCEEEEeCCCCCCC---cHHHHHHHHHcCCcE
Q 012987 216 HVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKN---PAAIIRKLKDVGLHG 292 (452)
Q Consensus 216 hia~aLv~~G~v~~~~~af~~yL~~g~p~yv~~~~~~~eeaI~~I~~aGGvaVLAHP~~~~~---~~~li~~l~~~GldG 292 (452)
+|+--.-|. ......+.++|..|..+|+++|+|||.++.. ..+.+..|++.|+ +
T Consensus 103 --------------------~~vl~e~~~--~~~~~~~~~~l~~i~~~g~v~ILAHPeRy~~~~~~~~~l~~l~~~G~-~ 159 (262)
T 3qy7_A 103 --------------------KYILIEFPF--DHVPRYAEQLFYDLQLKGYIPVIAHPERNREIRENPSLLYHLVEKGA-A 159 (262)
T ss_dssp --------------------SEEEEECCT--TCCCTTHHHHHHHHHHTTCEEEEECGGGCHHHHHCTHHHHHHHHTTC-E
T ss_pred --------------------eEEEEeCCC--ccCHHHHHHHHHHHHHCCCcEEEECCCccccccccHHHHHHHHHCCC-E
Confidence 000000000 0112468999999999999999999987642 2357889999995 8
Q ss_pred EEEeCCCCCh---hhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeeeccCCCCCCC
Q 012987 293 LEVYRSDGKL---VDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGGSDYHGRGG 347 (452)
Q Consensus 293 IEV~~~~~~~---~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgGSDfHg~~~ 347 (452)
+|+..+.... ... ..+...|.++|++.+.|||+|++..
T Consensus 160 iEiN~~s~~g~~g~~~-----------------~~~~~~~~~~gl~~~igSDaH~~~~ 200 (262)
T 3qy7_A 160 SQITSGSLAGIFGKQL-----------------KAFSLRLVEANLIHFVASDAHNVKT 200 (262)
T ss_dssp EEEEHHHHHTTTCHHH-----------------HHHHHHHHHTTCCCEEECCBCSSSS
T ss_pred EEEECCccCcccchHH-----------------HHHHHHHHhCCCeEEEEccCCCCCC
Confidence 9998653211 111 2567788899999999999999853
No 8
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=99.72 E-value=5.7e-18 Score=163.32 Aligned_cols=175 Identities=22% Similarity=0.166 Sum_probs=115.4
Q ss_pred EEceeeeCCCC--CCCCCHH---HHHHHHHHcCCcEEEEecCCCCC----CHH-------HHHHHHHh--CCCeEEEEEE
Q 012987 74 VFELHSHSNFS--DGYLSPS---KLVERAHCNGVKVLALTDHDTMS----GIP-------EAIETARR--FGMKIIPGVE 135 (452)
Q Consensus 74 ~vDLH~HT~~S--DG~~sp~---elv~~A~~~Gl~~iaITDHdt~~----g~~-------~~~~~a~~--~gi~vI~GiE 135 (452)
++|+||||.+| ||..+++ +++++|.+.|++.|++|||.... ... ++.+..++ .+|.+++|+|
T Consensus 5 m~D~H~Ht~~~~ddg~~~~e~~~e~i~~A~~~Gi~~i~~TdH~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~G~E 84 (247)
T 2wje_A 5 MIDIHSHIVFDVDDGPKSREESKALLAESYRQGVRTIVSTSHRRKGMFETPEEKIAENFLQVREIAKEVASDLVIAYGAE 84 (247)
T ss_dssp EEECCBCCSTTSSSSCSSHHHHHHHHHHHHHTTEEEEECCCEEBTTTBCCCHHHHHHHHHHHHHHHHHHCTTCEEECCCE
T ss_pred CEEEecccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEeeE
Confidence 68999999998 9999998 69999999999999999996532 111 12221222 4899999999
Q ss_pred EEeEecCCCCCCCCcEEEEEEecCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCCHH
Q 012987 136 ISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRL 215 (452)
Q Consensus 136 is~~~~~~~~~~g~~vHILgy~~d~~~~~~~~L~~~L~~ir~~R~~R~~~~v~~L~~~Gi~i~~e~v~~~a~~~~~~gr~ 215 (452)
+.... .+.+. +.+.. -..+ .+.
T Consensus 85 ~~~~~--------------------------~~~~~------------------l~~~~-~~~l------~gs------- 106 (247)
T 2wje_A 85 IYYTP--------------------------DVLDK------------------LEKKR-IPTL------NDS------- 106 (247)
T ss_dssp EECCT--------------------------HHHHH------------------HHTTC-SCCG------GGS-------
T ss_pred EeecH--------------------------HHHHH------------------HhcCC-ccEE------CCC-------
Confidence 98631 11110 11100 0000 000
Q ss_pred HHHHHHHHcCccccHHHHHHHHhhcCCCccccCCCCCHHHHHHHHHHcCCEEEEeCCCCCCC---cHHHHHHHHHcCCcE
Q 012987 216 HVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKN---PAAIIRKLKDVGLHG 292 (452)
Q Consensus 216 hia~aLv~~G~v~~~~~af~~yL~~g~p~yv~~~~~~~eeaI~~I~~aGGvaVLAHP~~~~~---~~~li~~l~~~GldG 292 (452)
+|+--.-+. .......++++..+..+|+++|+|||.++.. ..+++..+++.|+.
T Consensus 107 --------------------~~vl~e~~~--~~~~~~~~~~i~~i~~~g~~~vlaHp~r~~~~~~~~~~l~~l~~~G~~- 163 (247)
T 2wje_A 107 --------------------RYALIEFSM--NTPYRDIHSALSKILMLGITPVIAHIERYDALENNEKRVRELIDMGCY- 163 (247)
T ss_dssp --------------------SEEEEECCT--TCCHHHHHHHHHHHHTTTCEEEETTGGGCGGGTTCHHHHHHHHHTTCE-
T ss_pred --------------------eEEEEeCCC--CcchHHHHHHHHHHHHCCCcEEEEehhhHHHHhhCHHHHHHHHHCCCE-
Confidence 000000000 0001235789999999999999999987642 35788999999997
Q ss_pred EEEeCCCC--Ch------hhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeeeccCCCCCC
Q 012987 293 LEVYRSDG--KL------VDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGGSDYHGRG 346 (452)
Q Consensus 293 IEV~~~~~--~~------~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgGSDfHg~~ 346 (452)
+|+.++.. .. ... ..+..++.++|+++|.|||+|++.
T Consensus 164 lEiN~~s~~~~~~~g~~~~~~-----------------~~~~~~~~~~gl~~~~GSDaH~~~ 208 (247)
T 2wje_A 164 TQVNSSHVLKPKLFGERYKFM-----------------KKRAQYFLEQDLVHVIASDMHNLD 208 (247)
T ss_dssp EEEEHHHHSCCCSSCCSCHHH-----------------HHHHHHHHHTTCCSEEECCBCCSS
T ss_pred EEEecHhhHhcCCCCCcChHH-----------------HHHHHHHHHCCCeEEEEeCCCCCc
Confidence 99987543 21 111 157788889999999999999984
No 9
>2hnh_A DNA polymerase III alpha subunit; DNA replication, nucleotidyltransferase, beta, PHP, transferase; HET: DNA; 2.30A {Escherichia coli} PDB: 2hqa_A*
Probab=99.72 E-value=6.6e-17 Score=181.87 Aligned_cols=84 Identities=26% Similarity=0.411 Sum_probs=75.5
Q ss_pred eEEceeeeCCCC--CCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeEEEEEEEEeEecCCCCCCCCc
Q 012987 73 VVFELHSHSNFS--DGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEISTIFCQRGSESEEP 150 (452)
Q Consensus 73 ~~vDLH~HT~~S--DG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI~GiEis~~~~~~~~~~g~~ 150 (452)
.++||||||.|| ||..+|++++++|++.|+++||||||+++.|+.++++++++.||++|+|+|+++.++..+ ...
T Consensus 5 ~~vdLH~HT~~S~lDG~~~~~elv~~A~~~Gl~alAITDH~~~~G~~~~~~~~~~~gIk~I~G~Ei~~~~~~~~---~~~ 81 (910)
T 2hnh_A 5 RFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGAGIKPIVGADFNVQCDLLG---DEL 81 (910)
T ss_dssp CCCCCCBCCGGGSSSCCSCHHHHHHHHHHTTCSEEEECCBTCCTTHHHHHHHHHHHTCEEEEEEEEEEECTTTT---TCC
T ss_pred ceeeecccccCchhcccCCHHHHHHHHHHCCCCEEEEEeCCcchhHHHHHHHHHHCCCeEEEEEEEEEecCCCC---ccc
Confidence 479999999999 999999999999999999999999999999999999999999999999999999864110 125
Q ss_pred EEEEEEecC
Q 012987 151 VHILAYYSS 159 (452)
Q Consensus 151 vHILgy~~d 159 (452)
+|+++|+.+
T Consensus 82 ~hlv~la~n 90 (910)
T 2hnh_A 82 THLTVLAAN 90 (910)
T ss_dssp EEEEEEECS
T ss_pred ceEEEEEcC
Confidence 899999974
No 10
>2w9m_A Polymerase X; SAXS, DNA repair, DNA polymerase, DNA replication; 2.46A {Deinococcus radiodurans}
Probab=99.72 E-value=4.3e-17 Score=175.82 Aligned_cols=211 Identities=17% Similarity=0.157 Sum_probs=132.0
Q ss_pred hhhhhhccccc-cceeccCccCCCCCCCCccccccc---ccCCCCceEEceeeeCCCCCCCCCHHHHHHHHHHcCCcEEE
Q 012987 31 AEQSLAFNSVT-EWVYLDQSHSSSSSEDDFGVHQIL---NRAVDNNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLA 106 (452)
Q Consensus 31 ~~~~~a~~~~~-~W~~~~~~~~~~~~~~~f~~~~~~---~~~~~~~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~ia 106 (452)
.++..-|.... .|+-|-.+ ....++.+..++ .--...+|++||||||.||||..+|++++++|++.|++.||
T Consensus 285 ~~E~~if~~lgl~~i~Pe~R----e~~~e~~~a~lp~~~~lv~~~~~~~DlH~HT~~SDG~~t~eemv~~A~~~Gl~~Ia 360 (578)
T 2w9m_A 285 PTEAVVFHALDLPFRPAEYR----EPEHDDLWQTLPDPAELVTVGDLRGMIHTHSTWSDGGASIREMAEATLTLGHEFLG 360 (578)
T ss_dssp CSHHHHHHHTTCCCCCGGGC----SGGGTTTTTTSCCGGGSCCGGGCCEEEEECCTTTTCSSCHHHHHHHHHHTTCSEEE
T ss_pred CCHHHHHHHcCCCCCChhhc----CCcChhhhccCCCcccccchhhhceEEEecCCccCCCCCHHHHHHHHHHCCCeEEE
Confidence 34555566555 78877654 222334322222 10014588999999999999999999999999999999999
Q ss_pred EecCCCCCCH------HHHH-------HHHHhCCCeEEEEEEEEeEecCCCCCCCCcEEEEEEecCCCCCchHHHHHHHH
Q 012987 107 LTDHDTMSGI------PEAI-------ETARRFGMKIIPGVEISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLA 173 (452)
Q Consensus 107 ITDHdt~~g~------~~~~-------~~a~~~gi~vI~GiEis~~~~~~~~~~g~~vHILgy~~d~~~~~~~~L~~~L~ 173 (452)
||||++..+. ..+. ++.++ ||.+++|+|+++... + . ++. ..+ +
T Consensus 361 iTDH~~~~~~~~~~~~~~~~~~~~~i~~l~~~-gi~il~GiEv~i~~~------G-~-------ld~----~~~---~-- 416 (578)
T 2w9m_A 361 TADHSRAAYYANGLTIERLREQLKEIRELQRA-GLPIVAGSEVDILDD------G-S-------LDF----PDD---V-- 416 (578)
T ss_dssp ECEEBTTCGGGTCBCHHHHHHHHHHHHHHHHT-TCCEECEEEEEBCTT------S-C-------BSS----CHH---H--
T ss_pred EcCCCCccccccCCCHHHHHHHHHHHHHHHhc-CCeEEEeeeecccCC------c-c-------hhh----HHH---H--
Confidence 9999988543 2222 23333 999999999998631 1 1 110 011 0
Q ss_pred HHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCCHHHHHHHHHHcCccccHHHHHHHHhhcCCCccccCCCCCH
Q 012987 174 NIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLA 253 (452)
Q Consensus 174 ~ir~~R~~R~~~~v~~L~~~Gi~i~~e~v~~~a~~~~~~gr~hia~aLv~~G~v~~~~~af~~yL~~g~p~yv~~~~~~~ 253 (452)
|....+. ++..|.. +..+..+ ..
T Consensus 417 ----------------l~~~D~v---------------I~svH~~-------~~~~~~~-------------------~~ 439 (578)
T 2w9m_A 417 ----------------LGELDYV---------------VVSVHSN-------FTLDAAR-------------------QT 439 (578)
T ss_dssp ----------------HTTSSEE---------------EEECCSC-------TTSCHHH-------------------HH
T ss_pred ----------------HhcCCEE---------------EEEeccC-------CCCCHHH-------------------HH
Confidence 0000000 0000100 0000000 12
Q ss_pred HHHHHHHHHcCCEEEEeCCCCC---------CCcHHHHHHHHHcCCcEEEEeCCCCChhhhhhhhhhhhHHHHHhhHHHH
Q 012987 254 EVAVQLIHRTGGLAVLAHPWAL---------KNPAAIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQIT 324 (452)
Q Consensus 254 eeaI~~I~~aGGvaVLAHP~~~---------~~~~~li~~l~~~GldGIEV~~~~~~~~~~~~l~~~~n~~~l~~~~~~~ 324 (452)
++++++++ .|+++|+|||... .+.+.++..+++.| .+||+.++....... ..
T Consensus 440 ~~~~~ai~-~g~v~IlaHP~~~~~~~~~~~~~~~~~il~~~~e~g-~~lEIN~~~~r~~~~-----------------~~ 500 (578)
T 2w9m_A 440 ERLIRAVS-HPLVTVLGHATGRLLLRRPGYALDLDAVLGACEANG-TVVEINANAARLDLD-----------------WR 500 (578)
T ss_dssp HHHHHHHT-CSSCCEECSTTCCBTTTBCCCCCCHHHHHHHHHHHT-CEEEEECSTTTCBSC-----------------HH
T ss_pred HHHHHHHh-cCCCeEEECcchhhcCCCcCchhhHHHHHHHHHHCC-CEEEEECCCCCcCcH-----------------HH
Confidence 45666666 5999999999742 12346788888888 499998775432211 16
Q ss_pred HHHHHHHcCCeeeeccCCCCCC
Q 012987 325 YTDLADTYGLLKLGGSDYHGRG 346 (452)
Q Consensus 325 ~~~lA~~~gLl~tgGSDfHg~~ 346 (452)
+.++|.+ |+.++.|||+|.+.
T Consensus 501 ~~~~a~e-Gl~i~igSDAH~~~ 521 (578)
T 2w9m_A 501 EALRWRE-RLKFAINTDAHVPG 521 (578)
T ss_dssp HHHHHTT-TCCEEEECCCSSGG
T ss_pred HHHHHHc-CCEEEEECCCCChh
Confidence 7889999 99999999999974
No 11
>2hpi_A DNA polymerase III alpha subunit; POL-beta-like nucleotidyltransferase fold, transferase; HET: DNA; 3.00A {Thermus aquaticus} PDB: 2hpm_A* 3e0d_A*
Probab=99.65 E-value=1.5e-15 Score=174.20 Aligned_cols=99 Identities=25% Similarity=0.297 Sum_probs=80.3
Q ss_pred ceEEceeeeCCCC--CCCCCHHHHHHHHHH--cCCcEEEEecCCCCCCHHHHHHHHHhCCCeEEEEEEEEeEecCC-CCC
Q 012987 72 NVVFELHSHSNFS--DGYLSPSKLVERAHC--NGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEISTIFCQR-GSE 146 (452)
Q Consensus 72 ~~~vDLH~HT~~S--DG~~sp~elv~~A~~--~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI~GiEis~~~~~~-~~~ 146 (452)
+.++|||+||.|| ||..+|++++++|++ .|+++||||||+++.|+.++++.|++.||++|+|+|+++....+ +.+
T Consensus 5 ~~fvdLH~HT~~SlLDG~~~~~elv~~A~~~~~G~~alAITDH~~~~G~~~f~~~a~~~gIk~I~G~E~~~~~~~~~d~~ 84 (1220)
T 2hpi_A 5 LKFAHLHQHTQFSLLDGAAKLQDLLKWVKETTPEDPALAMTDHGNLFGAVEFYKKATAMGVKPIIGYEAYVAAESRFDRK 84 (1220)
T ss_dssp CCCCCCSBCCTTSTTTCCCCHHHHHHHHHHHCCSSCEEEEEEETCCTTHHHHHHHHHTTTCEEEEEEEEEEESSCTTCCC
T ss_pred CcEeEcccccCCCcccccCCHHHHHHHHHhccCCCCEEEEEecCcchhHHHHHHHHHHcCCeEEEEEEEEEecccccccc
Confidence 4589999999999 999999999999999 99999999999999999999999999999999999999975422 110
Q ss_pred C----CC-cEEEEEEecCCCCCchHHHHHHH
Q 012987 147 S----EE-PVHILAYYSSCGPSKYEELENFL 172 (452)
Q Consensus 147 ~----g~-~vHILgy~~d~~~~~~~~L~~~L 172 (452)
. .. ..|++.|..+ ..++..|.+++
T Consensus 85 ~~~~~d~~~~hLvlLAkN--~~GY~NL~kLi 113 (1220)
T 2hpi_A 85 RGKGLDGGYFHLTLLAKD--FTGYQNLVRLA 113 (1220)
T ss_dssp CC-----CEEEEEEEECS--HHHHHHHHHHH
T ss_pred ccccccCccceEEEEEcC--HHHHHHHHHHH
Confidence 0 11 3799999864 33455555443
No 12
>3b0x_A DNA polymerase beta family (X family); structural genomics, riken structural genomics/proteomics in RSGI, polxc, PHP, DRP lyase; HET: DNA DGT; 1.36A {Thermus thermophilus} PDB: 3au2_A* 3au6_A* 3auo_A* 3b0y_A*
Probab=99.63 E-value=3.3e-15 Score=160.96 Aligned_cols=69 Identities=28% Similarity=0.302 Sum_probs=57.9
Q ss_pred ceEEceeeeCCCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHH------H-------HHHHHHh-CCCeEEEEEEEE
Q 012987 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIP------E-------AIETARR-FGMKIIPGVEIS 137 (452)
Q Consensus 72 ~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~------~-------~~~~a~~-~gi~vI~GiEis 137 (452)
.|++||||||.||||..+|++++++|++.|++.|+||||++..++. + +.++.++ .+|++++|+|++
T Consensus 336 ~~~~DlH~HT~~SDG~~t~ee~v~~A~~~G~~~iaiTDH~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~i~i~~G~Ei~ 415 (575)
T 3b0x_A 336 QVKGDLQVHSTYSDGQNTLEELWEAAKTMGYRYLAVTDHSPAVRVAGGPSPEEALKRVGEIRRFNETHGPPYLLAGAEVD 415 (575)
T ss_dssp GCCEEEEECCTTTTCSCCHHHHHHHHHHTTCSEEEEEEECTTTTTSSCSCHHHHHHHHHHHHHHHHHHCSSEEEEEEEEE
T ss_pred hcCeeEeecCCccCCCCCHHHHHHHHHHCCCCEEEEcCCCCccccccCCCHHHHHHHHHHHHHHHHhcCCCeEEEEEeec
Confidence 6899999999999999999999999999999999999999876531 1 2223234 489999999999
Q ss_pred eEe
Q 012987 138 TIF 140 (452)
Q Consensus 138 ~~~ 140 (452)
+..
T Consensus 416 ~~~ 418 (575)
T 3b0x_A 416 IHP 418 (575)
T ss_dssp BCT
T ss_pred ccC
Confidence 853
No 13
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C, DNA polymerase III; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=99.47 E-value=7.4e-14 Score=158.03 Aligned_cols=103 Identities=28% Similarity=0.389 Sum_probs=84.3
Q ss_pred CceEEceeeeCCCC--CCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeEEEEEEEEeEecCCCC---
Q 012987 71 NNVVFELHSHSNFS--DGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEISTIFCQRGS--- 145 (452)
Q Consensus 71 ~~~~vDLH~HT~~S--DG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI~GiEis~~~~~~~~--- 145 (452)
.++++|||+||.|| ||..+|++++++|++.|+++||||||+++.|+.+++++|++.||++|+|+|+++.+.....
T Consensus 113 ~~~~vdLH~HT~~S~lDG~~~~~eLv~~A~~~G~~aiAITDH~~~~G~~~~~~~a~~~gIk~I~G~E~~~~~~~~~~~~~ 192 (1041)
T 3f2b_A 113 GEKRVELHLHTPMSQMDAVTSVTKLIEQAKKWGHPAIAVTDHAVVQSFPEAYSAAKKHGMKVIYGLEANIVDDGVPIAYN 192 (1041)
T ss_dssp TSCCCBCCBCCTTSTTTCCSCHHHHHHHHHHTTCSCEEECCBSCCTTHHHHHHHHHHHTCCEEEEEEEEEECC-------
T ss_pred CcceEEcccCCcCccccccCCHHHHHHHHHHCCCCEEEEecccchhhHHHHHHHHHHCCCEEEEEEEEEEEeCCcccccc
Confidence 46899999999999 9999999999999999999999999999999999999999999999999999997642100
Q ss_pred -------CCCCcEEEEEEecCCCCCchHHHHHHHHHH
Q 012987 146 -------ESEEPVHILAYYSSCGPSKYEELENFLANI 175 (452)
Q Consensus 146 -------~~g~~vHILgy~~d~~~~~~~~L~~~L~~i 175 (452)
......|++.|..+ ..++..|.++++..
T Consensus 193 ~~~~~~~~~~~~~hlvlLAkN--~~Gy~nL~kLvS~a 227 (1041)
T 3f2b_A 193 ETHRRLGSGSGPFHVTLLAQN--ETGLKNLFKLVSLS 227 (1041)
T ss_dssp -----------CEEEEEEECS--HHHHHHHHHHHHHH
T ss_pred cccccccccCCCceEEEEeCC--HHHHHHHHHHHHHH
Confidence 01234699998764 45677777766543
No 14
>3dcp_A Histidinol-phosphatase; HISK, histidine biosynthesis, NESG, LMR141, structural genomics, PSI-2, protein structure initiative; 2.10A {Listeria monocytogenes str}
Probab=99.35 E-value=1.3e-11 Score=122.05 Aligned_cols=67 Identities=18% Similarity=0.330 Sum_probs=53.0
Q ss_pred eEEceeeeCCCCC-CC-CCHHHHHHHHHHcCCcEEEEecCCCCCC-H---------------------H----HHHHHHH
Q 012987 73 VVFELHSHSNFSD-GY-LSPSKLVERAHCNGVKVLALTDHDTMSG-I---------------------P----EAIETAR 124 (452)
Q Consensus 73 ~~vDLH~HT~~SD-G~-~sp~elv~~A~~~Gl~~iaITDHdt~~g-~---------------------~----~~~~~a~ 124 (452)
|++|+|+||.+|| |. .++++++++|+++|++.|+||||..... + . ++.++.+
T Consensus 1 m~~D~H~Ht~~s~~~~~~~~~e~~~~A~~~G~~~i~~TdH~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~Y~~~i~~l~~ 80 (283)
T 3dcp_A 1 MKRDGHTHTEFCPHGTHDDVEEMVLKAIELDFDEYSIVEHAPLSSEFMKNTAGDKEAVTTASMAMSDLPYYFKKMNHIKK 80 (283)
T ss_dssp CCEEEEECCTTCTTSCCCCHHHHHHHHHHTTCCEEEEEEECCCCHHHHHTBCSCTHHHHTTSCCGGGHHHHHHHHHHHHH
T ss_pred CCeEEeeCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEecCCCCcchhhhcccccccccccccchHHHHHHHHHHHHHHHH
Confidence 5799999999997 55 6999999999999999999999987642 1 1 1122233
Q ss_pred hC--CCeEEEEEEEEeE
Q 012987 125 RF--GMKIIPGVEISTI 139 (452)
Q Consensus 125 ~~--gi~vI~GiEis~~ 139 (452)
++ +|.++.|+|+...
T Consensus 81 ~y~~~I~Il~GiE~d~~ 97 (283)
T 3dcp_A 81 KYASDLLIHIGFEVDYL 97 (283)
T ss_dssp HTTTTCEEEEEEEEECC
T ss_pred HccCCCeEEEEEEeccc
Confidence 33 7999999999874
No 15
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=98.55 E-value=2.1e-07 Score=87.94 Aligned_cols=53 Identities=9% Similarity=-0.063 Sum_probs=40.5
Q ss_pred EEceeeeCCCCCCCCCHHHHHHHHHHcCCcEEEEecCCC-CCCHHHHHHHHHhCCCeEEEEEEEEeE
Q 012987 74 VFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT-MSGIPEAIETARRFGMKIIPGVEISTI 139 (452)
Q Consensus 74 ~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt-~~g~~~~~~~a~~~gi~vI~GiEis~~ 139 (452)
++|||+| +.++++.|++. ++.+|||||.. +.+...+.+.. .++.+ .|+|++..
T Consensus 9 ~~D~hvh---------~~e~~~~A~~~-~~~i~itdH~~~~~~~~~~~~l~--~~~~I-~GvEi~~~ 62 (212)
T 1v77_A 9 FIEMDIR---------DKEAYELAKEW-FDEVVVSIKFNEEVDKEKLREAR--KEYGK-VAILLSNP 62 (212)
T ss_dssp CEEEEEC---------SHHHHHHHHHH-CSEEEEEEEESSCCCHHHHHHHH--HHHSC-EEEEEESC
T ss_pred EEEeCcC---------HHHHHHHHHHH-hcEEEEeeccCcccchhhHHHHH--hcCCe-eEEEEecC
Confidence 8999999 99999999999 99999999954 33433333332 33555 99999863
No 16
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=91.05 E-value=0.35 Score=45.67 Aligned_cols=62 Identities=15% Similarity=0.195 Sum_probs=46.1
Q ss_pred ceEEceeeeCCCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeEEEEE
Q 012987 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGV 134 (452)
Q Consensus 72 ~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI~Gi 134 (452)
++.+|.|||-.......+++++++.+.+.|++.+.++-.+ ......+.+.+++++..+++++
T Consensus 4 m~~iD~H~Hl~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~-~~~~~~~~~l~~~~~~~i~~~~ 65 (272)
T 2y1h_A 4 VGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEH-SGEFEKIMQLSERYNGFVLPCL 65 (272)
T ss_dssp CCEEEEEECTTSGGGTTTHHHHHHHHHHTTEEEEEECCSS-GGGHHHHHHHHHHTTTTEEEEE
T ss_pred CcEEEEeeCCCchhhhcCHHHHHHHHHHCCCCEEEEeCCC-HHHHHHHHHHHHHCCCCEEEEE
Confidence 5689999998766444589999999999999987776332 3455667777887775565543
No 17
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=87.85 E-value=0.99 Score=42.10 Aligned_cols=55 Identities=15% Similarity=0.207 Sum_probs=40.1
Q ss_pred ceEEceeeeCCCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCC
Q 012987 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG 127 (452)
Q Consensus 72 ~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~g 127 (452)
++.+|.|||-....-..+++++++.+.+.|++.+.++-.+ ......+.+.+++++
T Consensus 3 m~~iD~H~Hl~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~-~~~~~~~~~l~~~~~ 57 (259)
T 1zzm_A 3 CRFIDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPATE-AENFARVLALAENYQ 57 (259)
T ss_dssp CCEEESCBCTTSTTTTTCHHHHHHHHHHTTEEEEEEECCS-GGGHHHHHHHHHHCT
T ss_pred ceEEEeeecCCchhhccCHHHHHHHHHHcCCCEEEEecCC-HHHHHHHHHHHHhCC
Confidence 4589999998876545579999999999999987665222 334556666666654
No 18
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=83.16 E-value=1.1 Score=43.55 Aligned_cols=54 Identities=20% Similarity=0.208 Sum_probs=39.8
Q ss_pred ceEEceeeeCCCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhC
Q 012987 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRF 126 (452)
Q Consensus 72 ~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~ 126 (452)
++.+|-|||-...+-....++++++|++.|++.+.++== +......+.++++++
T Consensus 1 M~~iD~H~HL~~~~~~~d~~~vl~~a~~~gV~~~v~~g~-~~~~~~~~~~la~~~ 54 (287)
T 3rcm_A 1 MQLIDIGVNLTNSSFHDQQAAIVERALEAGVTQMLLTGT-SLAVSEQALELCQQL 54 (287)
T ss_dssp CCEEEEEECTTCGGGTTCHHHHHHHHHHTTEEEEEECCC-SHHHHHHHHHHHHHH
T ss_pred CceEEEeecCCchhcccCHHHHHHHHHHcCCeEEEEecC-CHHHHHHHHHHHHhC
Confidence 367999999987655568999999999999998887611 122345566666654
No 19
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=82.20 E-value=1.6 Score=40.83 Aligned_cols=55 Identities=20% Similarity=0.212 Sum_probs=37.4
Q ss_pred ceEEceeeeCCCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCC
Q 012987 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG 127 (452)
Q Consensus 72 ~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~g 127 (452)
++.+|.|||-...+-..+++++++.+.+.|++.+.++--+ ......+.+.+++++
T Consensus 3 m~~iD~H~Hl~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~-~~~~~~~~~l~~~~~ 57 (264)
T 1xwy_A 3 YRMFDIGVNLTSSQFAKDRDDVVACAFDAGVNGLLITGTN-LRESQQAQKLARQYS 57 (264)
T ss_dssp --CEEEEECTTSGGGTTTHHHHHHHHHHTTCCEEEECCCS-HHHHHHHHHHHHHST
T ss_pred CcEEEEeeCCCChhhccCHHHHHHHHHHCCCCEEEEeCCC-HHHHHHHHHHHHhCC
Confidence 3479999998765434579999999999999987764221 223445556666654
No 20
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=81.06 E-value=1.3 Score=41.18 Aligned_cols=55 Identities=11% Similarity=0.051 Sum_probs=37.4
Q ss_pred ceEEceeeeCCCCCC---CCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCC
Q 012987 72 NVVFELHSHSNFSDG---YLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG 127 (452)
Q Consensus 72 ~~~vDLH~HT~~SDG---~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~g 127 (452)
+|.+|.|||....+- ..+++++++.+.+.|++.+.+.-.+ ......+.+.+++++
T Consensus 1 m~~iD~H~Hl~~~~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~-~~~~~~~~~~~~~~p 58 (265)
T 1yix_A 1 MFLVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATT-LPSYLHMRDLVGERD 58 (265)
T ss_dssp CCEEEEEECGGGSCTTTTCSSHHHHHHHHHHTTEEEEEECCSS-HHHHHHHHHHHCSCT
T ss_pred CcEEEEeeCCCchhhcccccCHHHHHHHHHHCCCCEEEEeCCC-HHHHHHHHHHHHHCC
Confidence 358999999865432 5689999999999999997774322 112334455555544
No 21
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=80.97 E-value=0.59 Score=44.92 Aligned_cols=50 Identities=16% Similarity=0.226 Sum_probs=38.2
Q ss_pred eEEceeeeCCCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCC
Q 012987 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG 127 (452)
Q Consensus 73 ~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~g 127 (452)
+.+|-|||-.+.+ ..++++++|++.|+..+.++ .+......+.++++++.
T Consensus 2 ~liDtH~HL~~~~---d~~~vl~~a~~~gV~~i~v~--~~~~~~~~~~~la~~~~ 51 (254)
T 3gg7_A 2 SLIDFHVHLDLYP---DPVAVARACEERQLTVLSVT--TTPAAWRGTLALAAGRP 51 (254)
T ss_dssp CCEEEEECGGGSS---SHHHHHHHHHHTTCEEEECC--SSGGGHHHHHGGGTTCT
T ss_pred ceEEEeeCCCCCC---CHHHHHHHHHHCCCcEEEec--CCHHHHHHHHHHHHhCC
Confidence 4799999998653 78999999999999987764 34555666666666653
No 22
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=80.90 E-value=2.2 Score=39.56 Aligned_cols=54 Identities=20% Similarity=0.255 Sum_probs=38.0
Q ss_pred eEEceeeeCCCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCC
Q 012987 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG 127 (452)
Q Consensus 73 ~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~g 127 (452)
|.+|.|+|........+++++++.+.+.|++.+.+.-.+ ......+.+.+++++
T Consensus 1 m~iD~H~Hl~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~-~~~~~~~~~~~~~~p 54 (265)
T 2gzx_A 1 MLIDTHVHLNDEQYDDDLSEVITRAREAGVDRMFVVGFN-KSTIERAMKLIDEYD 54 (265)
T ss_dssp -CEEEEECTTSGGGTTTHHHHHHHHHHTTCCEEEEEECS-HHHHHHHHHHHHHCT
T ss_pred CeEEEeeCCCCcccccCHHHHHHHHHHcCCCEEEEeCCC-HHHHHHHHHHHHhCC
Confidence 479999998765444579999999999999987776544 222344555666654
No 23
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=80.03 E-value=1.4 Score=42.70 Aligned_cols=55 Identities=18% Similarity=0.201 Sum_probs=38.1
Q ss_pred ceEEceeeeCCCC--CCC--------CCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCC
Q 012987 72 NVVFELHSHSNFS--DGY--------LSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG 127 (452)
Q Consensus 72 ~~~vDLH~HT~~S--DG~--------~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~g 127 (452)
++.+|.|||-... ++. .+++++++.|++.|++.+.++=.+ ......+.+.+++++
T Consensus 1 ~~~iD~H~Hl~~~~~~~~~~~~~~h~~d~~~vl~~~~~~GV~~~v~~~~~-~~~~~~~~~la~~~~ 65 (301)
T 2xio_A 1 MKFIDIGINLTDPMFRGIYRGVQKHQDDLQDVIGRAVEIGVKKFMITGGN-LQDSKDALHLAQTNG 65 (301)
T ss_dssp CCEEEEEECTTCGGGGTEETTEECSCCCHHHHHHHHHHHTEEEEEECCCS-HHHHHHHHHHHTTCT
T ss_pred CeEEEEcCCCCChHhcccccccccCccCHHHHHHHHHHCCCCEEEEeCCC-HHHHHHHHHHHHHCC
Confidence 3579999998765 332 588999999999999998887321 223344555555543
No 24
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=67.57 E-value=11 Score=34.73 Aligned_cols=21 Identities=14% Similarity=0.216 Sum_probs=14.6
Q ss_pred cHHHHHHHHHcCCcEEEEeCC
Q 012987 278 PAAIIRKLKDVGLHGLEVYRS 298 (452)
Q Consensus 278 ~~~li~~l~~~GldGIEV~~~ 298 (452)
..+.++.++++|++|||++..
T Consensus 32 ~~~~l~~~~~~G~~~vEl~~~ 52 (257)
T 3lmz_A 32 LDTTLKTLERLDIHYLCIKDF 52 (257)
T ss_dssp HHHHHHHHHHTTCCEEEECTT
T ss_pred HHHHHHHHHHhCCCEEEEecc
Confidence 456677777777777777753
No 25
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=67.37 E-value=7.5 Score=39.52 Aligned_cols=24 Identities=17% Similarity=-0.092 Sum_probs=19.4
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCCC
Q 012987 252 LAEVAVQLIHRTGGLAV--LAHPWAL 275 (452)
Q Consensus 252 ~~eeaI~~I~~aGGvaV--LAHP~~~ 275 (452)
....+++.||+.|+.++ |.|+++.
T Consensus 97 ~~k~l~davH~~G~~i~~QL~H~Gr~ 122 (400)
T 4gbu_A 97 EWTKIFNAIHEKKSFVWVQLAVLGWA 122 (400)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGGG
T ss_pred HHHHHHHHHHhcCCceEEeeeecCcc
Confidence 35678899999999988 7898753
No 26
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=67.25 E-value=13 Score=34.27 Aligned_cols=46 Identities=20% Similarity=0.300 Sum_probs=32.7
Q ss_pred CcHHHHHHHHHcCCcEEEEeCCC--------------CChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeeec
Q 012987 277 NPAAIIRKLKDVGLHGLEVYRSD--------------GKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGG 339 (452)
Q Consensus 277 ~~~~li~~l~~~GldGIEV~~~~--------------~~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgG 339 (452)
...+.++.++++|++|||++... .++.+. ..+.++++++||-+++.
T Consensus 23 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~l~~~gl~i~~~ 82 (262)
T 3p6l_A 23 PLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQ-----------------KEIKELAASKGIKIVGT 82 (262)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHH-----------------HHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHH-----------------HHHHHHHHHcCCeEEEE
Confidence 45678888999999999998532 122222 26788899999977654
No 27
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=67.07 E-value=2.9 Score=39.44 Aligned_cols=57 Identities=7% Similarity=0.165 Sum_probs=41.3
Q ss_pred CCceEEceeeeCCCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCC
Q 012987 70 DNNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG 127 (452)
Q Consensus 70 ~~~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~g 127 (452)
++.-++|.|||-.+.+-..+++++++.+.+.|++.+.++-.+ ......+.+.+++++
T Consensus 9 ~~~~~~~~~~hl~~~~~~~~~~~~l~~~~~~GV~~~v~~~~~-~~~~~~~~~l~~~~p 65 (268)
T 1j6o_A 9 HHHHMVDTHAHLHFHQFDDDRNAVISSFEENNIEFVVNVGVN-LEDSKKSLDLSKTSD 65 (268)
T ss_dssp CCCCEEEEEECTTSGGGTTTHHHHHHTTTTTTEEEEEEECSS-HHHHHHHHHHHTTCT
T ss_pred ccccccccccCCCChhhccCHHHHHHHHHHcCCCEEEEeCCC-HHHHHHHHHHHHHCC
Confidence 345689999999988777899999999999999877664321 222345556666655
No 28
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=63.27 E-value=4.8 Score=39.98 Aligned_cols=56 Identities=16% Similarity=0.280 Sum_probs=41.0
Q ss_pred CCceEEceeeeCCCCC--C--------CCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhC
Q 012987 70 DNNVVFELHSHSNFSD--G--------YLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRF 126 (452)
Q Consensus 70 ~~~~~vDLH~HT~~SD--G--------~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~ 126 (452)
..++.+|.|||-+... | .-..++++++|++.|+..+.++== +......+.++++++
T Consensus 24 ~~m~~iDtH~HL~~~~f~g~y~gk~~h~~d~~~vl~rA~~aGV~~ii~~g~-~~~~~~~~~~La~~~ 89 (325)
T 3ipw_A 24 MAQQFIDIGANLTDDNYFGNYHGKHYHEEDIDVVLQRAERNGLSHIIITSG-CLNDFKKAIEIINKY 89 (325)
T ss_dssp CCCCEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECCC-SHHHHHHHHHHHHHH
T ss_pred cCCCeEEEEECCCchHhccccccccccccCHHHHHHHHHHcCCcEEEEccC-CHHHHHHHHHHHHHC
Confidence 3467899999988652 2 568899999999999998877632 233455666777665
No 29
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=62.98 E-value=3.4 Score=41.99 Aligned_cols=30 Identities=27% Similarity=0.268 Sum_probs=27.2
Q ss_pred CceEEceeeeCCCCCCCCCHHHHHHHHHHcCCc
Q 012987 71 NNVVFELHSHSNFSDGYLSPSKLVERAHCNGVK 103 (452)
Q Consensus 71 ~~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~ 103 (452)
...+++||+|- ||+++|+.+++.|++.|++
T Consensus 28 ~LPKvELH~HL---dGsl~p~tl~~LA~~~g~~ 57 (380)
T 4gxw_A 28 ALPKVELHCHL---LGAVRHDTFVALAQRSGAP 57 (380)
T ss_dssp HSCEEECCBBG---GGCCCHHHHHHHHHHHTCS
T ss_pred hChhHHhhcCC---cCCCCHHHHHHHHHHhCCC
Confidence 35689999997 8999999999999999976
No 30
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=62.02 E-value=3.9 Score=40.89 Aligned_cols=31 Identities=35% Similarity=0.507 Sum_probs=28.1
Q ss_pred CCceEEceeeeCCCCCCCCCHHHHHHHHHHcCCc
Q 012987 70 DNNVVFELHSHSNFSDGYLSPSKLVERAHCNGVK 103 (452)
Q Consensus 70 ~~~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~ 103 (452)
....+++||+|- ||+++|+.+.+.|+++|++
T Consensus 11 ~~lPK~ELH~Hl---~Gsl~p~tl~~la~~~~~~ 41 (343)
T 3rys_A 11 TAPPVAELHLHI---EGTLQPELIFALAERNGIE 41 (343)
T ss_dssp SCCCEEECSBBG---GGGCCHHHHHHHHHHTTCC
T ss_pred hcCCceeeEecC---ccCCCHHHHHHHHHhcCCC
Confidence 446799999998 9999999999999999976
No 31
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=61.43 E-value=3.9 Score=41.34 Aligned_cols=30 Identities=27% Similarity=0.500 Sum_probs=27.4
Q ss_pred CceEEceeeeCCCCCCCCCHHHHHHHHHHcCCc
Q 012987 71 NNVVFELHSHSNFSDGYLSPSKLVERAHCNGVK 103 (452)
Q Consensus 71 ~~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~ 103 (452)
...+++||+|- ||+++|+.+.+.|+++|++
T Consensus 5 ~lPK~ELH~HL---~Gsl~p~tl~~La~~~~~~ 34 (367)
T 3iar_A 5 DKPKVELHVHL---DGSIKPETILYYGRRRGIA 34 (367)
T ss_dssp CSCEEECCBBG---GGSCCHHHHHHHHHHHTCC
T ss_pred CCCeeEeeecc---cCCCCHHHHHHHHHhcCCC
Confidence 45699999998 9999999999999999975
No 32
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=60.97 E-value=10 Score=35.46 Aligned_cols=44 Identities=18% Similarity=0.117 Sum_probs=33.0
Q ss_pred cHHHHHHHHHcCCcEEEEeCCC---CChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeee
Q 012987 278 PAAIIRKLKDVGLHGLEVYRSD---GKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLG 338 (452)
Q Consensus 278 ~~~li~~l~~~GldGIEV~~~~---~~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tg 338 (452)
....++.+++.|++|||+.... .+..+. ..+.++++++||-+++
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~-----------------~~~~~~l~~~gl~i~~ 65 (294)
T 3vni_A 19 YKYYIEKVAKLGFDILEIAASPLPFYSDIQI-----------------NELKACAHGNGITLTV 65 (294)
T ss_dssp HHHHHHHHHHHTCSEEEEESTTGGGCCHHHH-----------------HHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCCEEEecCcccCCcCHHHH-----------------HHHHHHHHHcCCeEEE
Confidence 4677888899999999999542 222222 2688899999999887
No 33
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=60.23 E-value=7.1 Score=37.20 Aligned_cols=64 Identities=19% Similarity=0.135 Sum_probs=42.2
Q ss_pred eEEceeeeCCCC--CC-----C----CCHH-HH---HHHHHHcCCcEEEEecCCCC-CCHHHHHHHHHhCCCeEEEEEEE
Q 012987 73 VVFELHSHSNFS--DG-----Y----LSPS-KL---VERAHCNGVKVLALTDHDTM-SGIPEAIETARRFGMKIIPGVEI 136 (452)
Q Consensus 73 ~~vDLH~HT~~S--DG-----~----~sp~-el---v~~A~~~Gl~~iaITDHdt~-~g~~~~~~~a~~~gi~vI~GiEi 136 (452)
-.+|.|+|...+ +. . ++.. ++ +++|++.|+..+...=++.. .....+.+++++.|+.+++++-+
T Consensus 17 G~iD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~ 96 (314)
T 2vc7_A 17 GFTLIHEHLRVFSEAVRQQWPHLYNEDEEFRNAVNEVKRAMQFGVKTIVDPTVMGLGRDIRFMEKVVKATGINLVAGTGI 96 (314)
T ss_dssp CSEESSCBSCBCCHHHHHHCGGGCCHHHHHHHHHHHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEECEEB
T ss_pred CCcccccccccCcchhcccCcchhhhcccHHHHHHHHHHHHHcCCCEEEecCCCCCCcCHHHHHHHHHHcCCeEEEEeec
Confidence 479999999763 21 1 0122 23 48899999998876666533 33666777788888877766544
No 34
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=60.18 E-value=14 Score=34.37 Aligned_cols=43 Identities=14% Similarity=0.079 Sum_probs=32.7
Q ss_pred CcHHHHHHHHHcCCcEEEEeCCCCChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeee
Q 012987 277 NPAAIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLG 338 (452)
Q Consensus 277 ~~~~li~~l~~~GldGIEV~~~~~~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tg 338 (452)
...+.++.+++.|++|||+..+... +.+ .+.++++++||-+++
T Consensus 24 ~~~~~l~~~~~~G~~~vEl~~~~~~--~~~-----------------~~~~~l~~~gl~~~~ 66 (269)
T 3ngf_A 24 PFLERFRLAAEAGFGGVEFLFPYDF--DAD-----------------VIARELKQHNLTQVL 66 (269)
T ss_dssp CHHHHHHHHHHTTCSEEECSCCTTS--CHH-----------------HHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHcCCCEEEecCCccC--CHH-----------------HHHHHHHHcCCcEEE
Confidence 3467888899999999999876421 121 678889999998775
No 35
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=59.98 E-value=3.9 Score=40.51 Aligned_cols=29 Identities=34% Similarity=0.368 Sum_probs=26.8
Q ss_pred ceEEceeeeCCCCCCCCCHHHHHHHHHHcCCc
Q 012987 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVK 103 (452)
Q Consensus 72 ~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~ 103 (452)
..+++||+|- ||+++|+.+.+.|+++|++
T Consensus 10 lPK~ELH~Hl---~Gsl~~~t~~~la~~~~~~ 38 (326)
T 3pao_A 10 LPKAELHLHL---EGTLEPELLFALAERNRIA 38 (326)
T ss_dssp SCEEECSBBG---GGGCCHHHHHHHHHHTTCC
T ss_pred CCceEEEecc---cCCCCHHHHHHHHHhcCCC
Confidence 4689999998 9999999999999999976
No 36
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=57.43 E-value=10 Score=37.89 Aligned_cols=23 Identities=30% Similarity=0.242 Sum_probs=18.5
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012987 252 LAEVAVQLIHRTGGLAV--LAHPWA 274 (452)
Q Consensus 252 ~~eeaI~~I~~aGGvaV--LAHP~~ 274 (452)
....+++.||+.|+.++ |.|+++
T Consensus 80 ~~k~l~~avh~~G~~i~~QL~H~Gr 104 (358)
T 4a3u_A 80 AWLPITQAVHDAGGLIFAQLWHMGR 104 (358)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCGG
T ss_pred HHHHHHHHHHhcCCceeeccccccc
Confidence 34678899999999877 788875
No 37
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=55.94 E-value=26 Score=32.36 Aligned_cols=46 Identities=15% Similarity=0.164 Sum_probs=33.6
Q ss_pred cHHHHHHHHHcCCcEEEEeCCCCCh---hhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeeecc
Q 012987 278 PAAIIRKLKDVGLHGLEVYRSDGKL---VDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGGS 340 (452)
Q Consensus 278 ~~~li~~l~~~GldGIEV~~~~~~~---~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgGS 340 (452)
..+.++.+++.|++|||+....... .+. ..+.++++++||-+++.+
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~-----------------~~~~~~l~~~gl~~~~~~ 67 (290)
T 2qul_A 19 FPATAKRIAGLGFDLMEISLGEFHNLSDAKK-----------------RELKAVADDLGLTVMCCI 67 (290)
T ss_dssp HHHHHHHHHHTTCSEEEEESTTGGGSCHHHH-----------------HHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHhCCCEEEEecCCccccchhhH-----------------HHHHHHHHHcCCceEEec
Confidence 4677888899999999998654221 221 267888999999888743
No 38
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=54.24 E-value=27 Score=31.98 Aligned_cols=15 Identities=20% Similarity=0.067 Sum_probs=10.7
Q ss_pred CCHHHHHHHHHHcCC
Q 012987 251 PLAEVAVQLIHRTGG 265 (452)
Q Consensus 251 ~~~eeaI~~I~~aGG 265 (452)
.+++++++.++++|-
T Consensus 19 ~~~~~~l~~~~~~G~ 33 (272)
T 2q02_A 19 LSIEAFFRLVKRLEF 33 (272)
T ss_dssp SCHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHcCC
Confidence 467777777777763
No 39
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=51.88 E-value=16 Score=37.41 Aligned_cols=56 Identities=21% Similarity=0.169 Sum_probs=42.0
Q ss_pred CCceEEceeeeCCCC--CC--------CCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhC
Q 012987 70 DNNVVFELHSHSNFS--DG--------YLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRF 126 (452)
Q Consensus 70 ~~~~~vDLH~HT~~S--DG--------~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~ 126 (452)
..+.++|.|||-+.+ +| .-..++++++|++.|+..+.+|== ++.....+.++|+++
T Consensus 10 ~~~~~iDih~nL~d~~f~g~y~~~~~h~~D~~~vl~rA~~~GV~~ii~~g~-~l~~s~~~~~La~~~ 75 (401)
T 3e2v_A 10 SPLKYYDIGLNLTDPMFHGIYNGKQYHPADYVKLLERAAQRHVKNALVTGS-SIAESQSAIELVSSV 75 (401)
T ss_dssp -CCCEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECCC-SHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEeCcCcHHHhhhccccccCccCHHHHHHHHHHCCCCEEEEecC-CHHHHHHHHHHHHHC
Confidence 346789999999876 44 257899999999999999988732 234456677778765
No 40
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=51.84 E-value=24 Score=32.81 Aligned_cols=43 Identities=12% Similarity=0.049 Sum_probs=25.9
Q ss_pred cHHHHHHHHHcCCcEEEEeCCCCChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeee
Q 012987 278 PAAIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLG 338 (452)
Q Consensus 278 ~~~li~~l~~~GldGIEV~~~~~~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tg 338 (452)
..+.++.+++.|++|||++.... ..+.+ .+.++++++||-+++
T Consensus 40 ~~~~l~~~~~~G~~~vEl~~~~~-~~~~~-----------------~~~~~l~~~gl~v~~ 82 (287)
T 3kws_A 40 LNEKLDFMEKLGVVGFEPGGGGL-AGRVN-----------------EIKQALNGRNIKVSA 82 (287)
T ss_dssp HHHHHHHHHHTTCCEEECBSTTC-GGGHH-----------------HHHHHHTTSSCEECE
T ss_pred HHHHHHHHHHcCCCEEEecCCch-HHHHH-----------------HHHHHHHHcCCeEEE
Confidence 45566677777777777776522 22221 466677777776653
No 41
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=51.18 E-value=15 Score=34.46 Aligned_cols=45 Identities=24% Similarity=0.248 Sum_probs=31.8
Q ss_pred HHHHHHHHHcCCcEEEEeCCCCChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCee-eecc
Q 012987 279 AAIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLK-LGGS 340 (452)
Q Consensus 279 ~~li~~l~~~GldGIEV~~~~~~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~-tgGS 340 (452)
.+.++.+++.|++|||+........+.+ .+.++++++||-+ +.+.
T Consensus 44 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~-----------------~~~~~l~~~gl~~~~~~~ 89 (290)
T 2zvr_A 44 RKGMELAKRVGYQAVEIAVRDPSIVDWN-----------------EVKILSEELNLPICAIGT 89 (290)
T ss_dssp HHHHHHHHHHTCSEEEEECSCGGGSCHH-----------------HHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHHHhCCCEEEEcCCCcchhhHH-----------------HHHHHHHHcCCeEEEEec
Confidence 4667778889999999987542222222 5788899999987 4444
No 42
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=51.18 E-value=26 Score=32.76 Aligned_cols=54 Identities=9% Similarity=0.043 Sum_probs=32.1
Q ss_pred CcHHHHHHHHHcCCcEEEEeCCCCChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeee
Q 012987 277 NPAAIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLG 338 (452)
Q Consensus 277 ~~~~li~~l~~~GldGIEV~~~~~~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tg 338 (452)
...+.++.+++.|++|||+....... ..... ..+. .....+.++++++||-+++
T Consensus 31 ~~~~~l~~~~~~G~~~iEl~~~~~~~-~~~~~-~~~~------~~~~~~~~~l~~~gl~i~~ 84 (295)
T 3cqj_A 31 CWLERLQLAKTLGFDFVEMSVDETDE-RLSRL-DWSR------EQRLALVNAIVETGVRVPS 84 (295)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCSSHH-HHGGG-GCCH------HHHHHHHHHHHHHCCEEEE
T ss_pred CHHHHHHHHHhcCCCEEEEecCCccc-ccCcc-cCCH------HHHHHHHHHHHHcCCeEEE
Confidence 34567888889999999998654210 00000 0000 0112678889999998764
No 43
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=49.90 E-value=31 Score=30.92 Aligned_cols=65 Identities=17% Similarity=0.128 Sum_probs=42.3
Q ss_pred HHHHHHHHc-CCEEEEeCCCCCCCcHHHHHHHHHcCCcEEEEeCCCCChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcC
Q 012987 255 VAVQLIHRT-GGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYG 333 (452)
Q Consensus 255 eaI~~I~~a-GGvaVLAHP~~~~~~~~li~~l~~~GldGIEV~~~~~~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~g 333 (452)
++|+.|++. .+++|.+|+.........++.+.+.|.|+|=+.... ..+... .+.+.++++|
T Consensus 42 ~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~~~~-~~~~~~-----------------~~~~~~~~~g 103 (211)
T 3f4w_A 42 NAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLGVT-DVLTIQ-----------------SCIRAAKEAG 103 (211)
T ss_dssp HHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTS-CHHHHH-----------------HHHHHHHHHT
T ss_pred HHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEeCCC-ChhHHH-----------------HHHHHHHHcC
Confidence 567777776 478888887543333445788888899998885432 122211 4667788888
Q ss_pred Ceee
Q 012987 334 LLKL 337 (452)
Q Consensus 334 Ll~t 337 (452)
+.+.
T Consensus 104 ~~~~ 107 (211)
T 3f4w_A 104 KQVV 107 (211)
T ss_dssp CEEE
T ss_pred CeEE
Confidence 6554
No 44
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=49.13 E-value=40 Score=31.01 Aligned_cols=49 Identities=10% Similarity=0.123 Sum_probs=32.5
Q ss_pred eCCCCCCCcHHHHHHHHHcCCcEEEEeCCCC--------ChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCe
Q 012987 270 AHPWALKNPAAIIRKLKDVGLHGLEVYRSDG--------KLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLL 335 (452)
Q Consensus 270 AHP~~~~~~~~li~~l~~~GldGIEV~~~~~--------~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl 335 (452)
+|-.........++.+++.|++|||++.... +..+. ..+.++++++||-
T Consensus 6 ~~~~~~~~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~-----------------~~~~~~l~~~gl~ 62 (287)
T 2x7v_A 6 AHMPISKGFDRVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAA-----------------TKFKREMKKHGID 62 (287)
T ss_dssp EECCCTTCGGGHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHH-----------------HHHHHHHHHHTCC
T ss_pred eeeccccCHHHHHHHHHHcCCCEEEEeCCCcccccccCCCHHHH-----------------HHHHHHHHHcCCC
Confidence 3433333456788889999999999975211 11221 2678889999997
No 45
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=48.33 E-value=29 Score=32.12 Aligned_cols=35 Identities=17% Similarity=0.220 Sum_probs=29.1
Q ss_pred eEEceeeeCCCCCCCCCHHHHHHHHHHcCCcEEEEecCCC
Q 012987 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT 112 (452)
Q Consensus 73 ~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt 112 (452)
|.+|.|+|... .++++++.+.+.|++.+.+.-...
T Consensus 3 m~iD~H~Hl~~-----~~~~~l~~m~~~Gv~~~v~~~~~~ 37 (272)
T 3cjp_A 3 LIIDGHTHVIL-----PVEKHIKIMDEAGVDKTILFSTSI 37 (272)
T ss_dssp CCEEEEEECCS-----SHHHHHHHHHHHTCCEEEEECCSC
T ss_pred eEEEehhhcCC-----CHHHHHHHHHHcCCCEEEEeCCCC
Confidence 57999999854 358999999999999988876643
No 46
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=47.72 E-value=29 Score=34.76 Aligned_cols=23 Identities=22% Similarity=0.196 Sum_probs=18.0
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012987 252 LAEVAVQLIHRTGGLAV--LAHPWA 274 (452)
Q Consensus 252 ~~eeaI~~I~~aGGvaV--LAHP~~ 274 (452)
....+++.||+.|+.++ |.|+++
T Consensus 88 ~~k~l~~avH~~G~~i~~QL~H~Gr 112 (361)
T 3gka_A 88 GWRLVTDAVHAAGGRIFLQLWHVGR 112 (361)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCTT
T ss_pred HHHHHHHHHHhcCCeEEEeeccCCc
Confidence 35678899999999876 688765
No 47
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=47.06 E-value=33 Score=32.90 Aligned_cols=71 Identities=8% Similarity=0.092 Sum_probs=48.0
Q ss_pred HHHHHHHHHHcCCEEEEeCCC-----CCCCcHHHHHHHHHcCCcEEEEeCCCCChhhhhhhhhhhhHHHHHhhHHHHHHH
Q 012987 253 AEVAVQLIHRTGGLAVLAHPW-----ALKNPAAIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTD 327 (452)
Q Consensus 253 ~eeaI~~I~~aGGvaVLAHP~-----~~~~~~~li~~l~~~GldGIEV~~~~~~~~~~~~l~~~~n~~~l~~~~~~~~~~ 327 (452)
++|-|++.|++|=-+..-..+ .....++.++..++.|++.||+-...-+..... ..++.+
T Consensus 57 l~eki~l~~~~gV~v~~GGTl~E~~~~qg~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~---------------~~~~I~ 121 (251)
T 1qwg_A 57 VKEKINYYKDWGIKVYPGGTLFEYAYSKGKFDEFLNECEKLGFEAVEISDGSSDISLEE---------------RNNAIK 121 (251)
T ss_dssp HHHHHHHHHTTTCEEEECHHHHHHHHHTTCHHHHHHHHHHHTCCEEEECCSSSCCCHHH---------------HHHHHH
T ss_pred HHHHHHHHHHcCCeEECCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEECCCcccCCHHH---------------HHHHHH
Confidence 788899999988333332211 013456788889999999999998765433221 126788
Q ss_pred HHHHcCCeeee
Q 012987 328 LADTYGLLKLG 338 (452)
Q Consensus 328 lA~~~gLl~tg 338 (452)
.+.++|+.+..
T Consensus 122 ~~~~~G~~v~~ 132 (251)
T 1qwg_A 122 RAKDNGFMVLT 132 (251)
T ss_dssp HHHHTTCEEEE
T ss_pred HHHHCCCEEee
Confidence 89999987744
No 48
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=46.69 E-value=22 Score=32.34 Aligned_cols=43 Identities=7% Similarity=-0.065 Sum_probs=31.8
Q ss_pred CcHHHHHHHHHcCCcEEEEeCCCCChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeee
Q 012987 277 NPAAIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLG 338 (452)
Q Consensus 277 ~~~~li~~l~~~GldGIEV~~~~~~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tg 338 (452)
...+.++.+++.|++|||+..+... +.+ .+.++++++||-+++
T Consensus 16 ~~~~~l~~~~~~G~~~vEl~~~~~~--~~~-----------------~~~~~l~~~gl~~~~ 58 (260)
T 1k77_A 16 PFIERFAAARKAGFDAVEFLFPYNY--STL-----------------QIQKQLEQNHLTLAL 58 (260)
T ss_dssp CGGGHHHHHHHHTCSEEECSCCTTS--CHH-----------------HHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHhCCCEEEecCCCCC--CHH-----------------HHHHHHHHcCCceEE
Confidence 3456788888999999999875321 111 578889999998875
No 49
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=46.27 E-value=32 Score=34.51 Aligned_cols=23 Identities=22% Similarity=0.154 Sum_probs=18.1
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012987 252 LAEVAVQLIHRTGGLAV--LAHPWA 274 (452)
Q Consensus 252 ~~eeaI~~I~~aGGvaV--LAHP~~ 274 (452)
....+++.||+.|+.++ |.|+++
T Consensus 80 ~~k~l~~avH~~G~~i~~QL~H~Gr 104 (362)
T 4ab4_A 80 GWNNVTKAVHAAGGRIFLQLWHVGR 104 (362)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCTT
T ss_pred HHHHHHHHHHhcCCEEEEEeccCcc
Confidence 35678899999999876 788765
No 50
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=45.13 E-value=22 Score=34.33 Aligned_cols=44 Identities=20% Similarity=0.172 Sum_probs=28.8
Q ss_pred cHHHHHHHHHc-CCcEEEEeCCCCChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeee
Q 012987 278 PAAIIRKLKDV-GLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLG 338 (452)
Q Consensus 278 ~~~li~~l~~~-GldGIEV~~~~~~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tg 338 (452)
..+.++.+++. |++|||+..+.....+.+ .+.++++++||-+++
T Consensus 35 ~~e~l~~aa~~~G~~~VEl~~~~~~~~~~~-----------------~l~~~l~~~Gl~i~~ 79 (333)
T 3ktc_A 35 TIDQINAAKEVGELSYVDLPYPFTPGVTLS-----------------EVKDALKDAGLKAIG 79 (333)
T ss_dssp HHHHHHHHHHHSSEEEEEEEESCSTTCCHH-----------------HHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHhCCCCEEEecCCCcchhHHH-----------------HHHHHHHHcCCeEEE
Confidence 35667777788 888888875543222222 567788888887653
No 51
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=44.81 E-value=12 Score=37.38 Aligned_cols=29 Identities=24% Similarity=0.171 Sum_probs=26.1
Q ss_pred ceEEceeeeCCCCCCCCCHHHHHHHHHHcCCc
Q 012987 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVK 103 (452)
Q Consensus 72 ~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~ 103 (452)
..+++||+|- ||+++|+.+++.|++.|++
T Consensus 44 lPK~eLH~Hl---~gsl~~~~l~~la~~~~~~ 72 (371)
T 2pgf_A 44 IPKCELHCHL---DLCFSADFFVSCIRKYNLQ 72 (371)
T ss_dssp SCEEEEEEEG---GGCCCHHHHHHHHHHTTCC
T ss_pred CcHhhheeCC---ccCCCHHHHHHHHHHcCCC
Confidence 5689999998 9999999999999999853
No 52
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=44.67 E-value=17 Score=33.71 Aligned_cols=18 Identities=22% Similarity=0.569 Sum_probs=9.3
Q ss_pred HHHHHHHHHcCCcEEEEe
Q 012987 279 AAIIRKLKDVGLHGLEVY 296 (452)
Q Consensus 279 ~~li~~l~~~GldGIEV~ 296 (452)
.+.++.++++|++|||++
T Consensus 18 ~~~l~~~~~~G~~~vEl~ 35 (286)
T 3dx5_A 18 TDIVQFAYENGFEGIELW 35 (286)
T ss_dssp HHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHhCCCEEEEc
Confidence 344445555555555554
No 53
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=44.57 E-value=34 Score=33.65 Aligned_cols=23 Identities=17% Similarity=0.053 Sum_probs=17.9
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012987 252 LAEVAVQLIHRTGGLAV--LAHPWA 274 (452)
Q Consensus 252 ~~eeaI~~I~~aGGvaV--LAHP~~ 274 (452)
....+++.||+.|+.++ |.|+++
T Consensus 84 ~~~~~~~~vh~~g~~i~~QL~h~Gr 108 (338)
T 1z41_A 84 GFAKLTEQVKEQGSKIGIQLAHAGR 108 (338)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHhcCCEEEEEecCCCc
Confidence 35678899999999755 889754
No 54
>1914_A Signal recognition particle 9/14 fusion protein; ALU domain, RNA binding, signal recognition particle (SRP), translation regulation; 2.53A {Mus musculus} SCOP: d.49.1.1 d.49.1.1 PDB: 1e8o_A* 1e8s_A 1ry1_C*
Probab=43.84 E-value=4.4 Score=38.55 Aligned_cols=30 Identities=33% Similarity=0.560 Sum_probs=7.6
Q ss_pred cccccchhhhhhhccCCCCCCCCchhhhhh
Q 012987 7 VEKRSKDKKKKKKQKRGGGKKKMTAEQSLA 36 (452)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 36 (452)
..||++|||+|++++.-+.+++++-++.+.
T Consensus 113 LKKrdKKkkKk~~~~~k~~~~~~~~~~~~~ 142 (232)
T 1914_A 113 LKKRDKKNKSKKSKPAQGGEQKLISEEDDS 142 (232)
T ss_dssp SBCC-----------CCEEEEEC-------
T ss_pred cCccccchhhhhhhhhhhhhhhhhhhhhcc
Confidence 567777776666666655556666555443
No 55
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=43.21 E-value=8.1 Score=35.58 Aligned_cols=14 Identities=21% Similarity=0.093 Sum_probs=8.4
Q ss_pred CCHHHHHHHHHHcC
Q 012987 251 PLAEVAVQLIHRTG 264 (452)
Q Consensus 251 ~~~eeaI~~I~~aG 264 (452)
.+++++++.++++|
T Consensus 18 ~~~~~~l~~~~~~G 31 (275)
T 3qc0_A 18 CGFAEAVDICLKHG 31 (275)
T ss_dssp CCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHcC
Confidence 35666666666655
No 56
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=42.91 E-value=26 Score=34.66 Aligned_cols=23 Identities=26% Similarity=0.173 Sum_probs=18.6
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012987 252 LAEVAVQLIHRTGGLAV--LAHPWA 274 (452)
Q Consensus 252 ~~eeaI~~I~~aGGvaV--LAHP~~ 274 (452)
....+++.||+.|+.++ |.|+++
T Consensus 84 ~~~~~~~~vh~~G~~i~~QL~H~Gr 108 (340)
T 3gr7_A 84 GLRELVGLVKEHGAAIGIQLAHAGR 108 (340)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHhCCCeEEEEeccCCC
Confidence 45788999999999877 678764
No 57
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=42.86 E-value=58 Score=29.83 Aligned_cols=20 Identities=15% Similarity=0.459 Sum_probs=15.7
Q ss_pred cHHHHHHHHHcCCcEEEEeC
Q 012987 278 PAAIIRKLKDVGLHGLEVYR 297 (452)
Q Consensus 278 ~~~li~~l~~~GldGIEV~~ 297 (452)
....++.+++.|++|||++.
T Consensus 16 ~~~~~~~~~~~G~~~vEl~~ 35 (270)
T 3aam_A 16 VAGAVEEATALGLTAFQIFA 35 (270)
T ss_dssp HHHHHHHHHHHTCSCEEEES
T ss_pred HHHHHHHHHHcCCCEEEEeC
Confidence 35667778888999999975
No 58
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=42.79 E-value=28 Score=33.91 Aligned_cols=60 Identities=17% Similarity=0.108 Sum_probs=38.0
Q ss_pred eEEceeeeCCCCCCC------------CCHHH-H---HHHHHHcCCcEEEEecCC-CCCCHHHHHHHHHhCCCeEEE
Q 012987 73 VVFELHSHSNFSDGY------------LSPSK-L---VERAHCNGVKVLALTDHD-TMSGIPEAIETARRFGMKIIP 132 (452)
Q Consensus 73 ~~vDLH~HT~~SDG~------------~sp~e-l---v~~A~~~Gl~~iaITDHd-t~~g~~~~~~~a~~~gi~vI~ 132 (452)
-.+|.|+|-.+.-+. -.+++ + +++|++.|+..|...=-+ .......+.+.++++++.++.
T Consensus 16 GliD~H~HL~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~aGV~~iv~~~~~~~~~~~~~~~~la~~~~~~i~~ 92 (330)
T 2ob3_A 16 GFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADVHIVA 92 (330)
T ss_dssp CSEEEEECSEECCTTHHHHCGGGGSCHHHHHHHHHHHHHHHHHTTCCEEEECCCGGGTCCHHHHHHHHHHHTCEEEC
T ss_pred CCceeeeCeecCCchhccCCCchhhhccCHHHHHHHHHHHHHHcCCCEEEeCCCCCcCCCHHHHHHHHHHhCCcEEE
Confidence 479999998763111 12334 3 788999999886443222 224567777778877766553
No 59
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=42.21 E-value=35 Score=33.89 Aligned_cols=23 Identities=22% Similarity=0.208 Sum_probs=18.6
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012987 252 LAEVAVQLIHRTGGLAV--LAHPWA 274 (452)
Q Consensus 252 ~~eeaI~~I~~aGGvaV--LAHP~~ 274 (452)
....+++.||+.|+.++ |.|+++
T Consensus 82 ~~~~~~~~vh~~G~~i~~QL~H~Gr 106 (343)
T 3kru_A 82 ELKKIVDICKANGAVMGIQLAHAGR 106 (343)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHhcCCceEeeehhhccC
Confidence 45788999999999877 678764
No 60
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=41.57 E-value=38 Score=32.12 Aligned_cols=50 Identities=16% Similarity=-0.039 Sum_probs=29.6
Q ss_pred HHHHHHHcCCcEEEEeCCCCChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeeec
Q 012987 281 IIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGG 339 (452)
Q Consensus 281 li~~l~~~GldGIEV~~~~~~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgG 339 (452)
.+..+++.|++|||+......+.....+ . ......+.++++++||-+++.
T Consensus 40 ~~~~a~~~G~~~vEl~~~~~~~~~~~~~--~-------~~~~~~~~~~l~~~Gl~i~~~ 89 (316)
T 3qxb_A 40 AGLVRDDLGLEYVQYTYDLTDPWWPDIE--R-------DRRAIAYAKAFRKAGLTIEST 89 (316)
T ss_dssp HHHHHHTSCCCEEEEETTTSCTTSCHHH--H-------HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHcCCCEEEeeccccCccccccc--h-------hhHHHHHHHHHHHcCCeEEEe
Confidence 4555678999999998654322100000 0 001126788899999987753
No 61
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=41.20 E-value=66 Score=29.57 Aligned_cols=48 Identities=4% Similarity=-0.150 Sum_probs=38.2
Q ss_pred CCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeEE
Q 012987 83 FSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKII 131 (452)
Q Consensus 83 ~SDG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI 131 (452)
+.-+.+++++.++.+++.|++.|-+..-.. ....++.+.+++.||.+.
T Consensus 18 ~~f~~~~~~~~l~~~~~~G~~~vEl~~~~~-~~~~~~~~~l~~~gl~~~ 65 (269)
T 3ngf_A 18 TMFNEVPFLERFRLAAEAGFGGVEFLFPYD-FDADVIARELKQHNLTQV 65 (269)
T ss_dssp TSCTTSCHHHHHHHHHHTTCSEEECSCCTT-SCHHHHHHHHHHTTCEEE
T ss_pred hhhccCCHHHHHHHHHHcCCCEEEecCCcc-CCHHHHHHHHHHcCCcEE
Confidence 335678999999999999999999975322 346778888889998874
No 62
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=41.00 E-value=46 Score=33.28 Aligned_cols=63 Identities=22% Similarity=0.317 Sum_probs=40.0
Q ss_pred eEEceeeeCCCC--CCC---------------------CCHHHH-------HHHHHHcCCcEEEEecC----CCCCCHHH
Q 012987 73 VVFELHSHSNFS--DGY---------------------LSPSKL-------VERAHCNGVKVLALTDH----DTMSGIPE 118 (452)
Q Consensus 73 ~~vDLH~HT~~S--DG~---------------------~sp~el-------v~~A~~~Gl~~iaITDH----dt~~g~~~ 118 (452)
=+||.|+|...+ .|. ++++++ +..+.+.|+..+ .|| ........
T Consensus 88 GlID~H~Hl~~~~~rg~~~~~~~~l~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv--~d~~~~~~~~~~~~~ 165 (479)
T 3h4u_A 88 GLVNTHHHMYQSLTRAVPAAQNAELFGWLTNLYKIWAHLTPEMIEVSTLTAMAELLQSGCTTS--SDHLYIYPNGSRLDD 165 (479)
T ss_dssp CEEECCCCGGGGGSCSCTTTTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEE--ECCBCCCCTTCCHHH
T ss_pred ceeecccccchhhhccccccCCCCHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHhCCeEEE--EECccccCCcchHHH
Confidence 379999999765 221 456554 445566786655 454 22234566
Q ss_pred HHHHHHhCCCeEEEEEEEE
Q 012987 119 AIETARRFGMKIIPGVEIS 137 (452)
Q Consensus 119 ~~~~a~~~gi~vI~GiEis 137 (452)
+.+.+...|+..+.+....
T Consensus 166 ~~~~~~~~g~r~~~~~~~~ 184 (479)
T 3h4u_A 166 SIGAAQRIGMRFHASRGAM 184 (479)
T ss_dssp HHHHHHHHTCEEEEEEEEC
T ss_pred HHHHHHHcCCEEEEEeeec
Confidence 7777778899887765543
No 63
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=40.66 E-value=29 Score=35.53 Aligned_cols=23 Identities=26% Similarity=0.281 Sum_probs=18.6
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012987 252 LAEVAVQLIHRTGGLAV--LAHPWA 274 (452)
Q Consensus 252 ~~eeaI~~I~~aGGvaV--LAHP~~ 274 (452)
....++++||+.|+.++ |.|+++
T Consensus 105 ~~k~l~~avh~~G~~i~~QL~H~Gr 129 (419)
T 3l5a_A 105 GLTNMASTMKQHGSLAIIQLAHAGR 129 (419)
T ss_dssp HHHHHHHHHHTTSCEEEEEEECCGG
T ss_pred HHHHHHHHHHhcCCEEEEEeccCCC
Confidence 45788899999999877 688875
No 64
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=40.30 E-value=37 Score=33.57 Aligned_cols=44 Identities=20% Similarity=0.209 Sum_probs=0.0
Q ss_pred HHHHHHHHHHcCCEEE--EeCCCCCCCcH--------------------------------------------HHHHHHH
Q 012987 253 AEVAVQLIHRTGGLAV--LAHPWALKNPA--------------------------------------------AIIRKLK 286 (452)
Q Consensus 253 ~eeaI~~I~~aGGvaV--LAHP~~~~~~~--------------------------------------------~li~~l~ 286 (452)
...+++.||+.|+.++ |.|+++..... .......
T Consensus 83 ~~~~~~~vh~~G~~i~~Ql~H~Gr~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~ 162 (349)
T 3hgj_A 83 LKELARRIREAGAVPGIQLAHAGRKAGTARPWEGGKPLGWRVVGPSPIPFDEGYPVPEPLDEAGMERILQAFVEGARRAL 162 (349)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCGGGCCBCCGGGTCCBCCCCCEESSSCCSSTTCCCCEECCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEeccCCccccccccccccccCCCcccCCCcccccCCCCCCccCCHHHHHHHHHHHHHHHHHHH
Q ss_pred HcCCcEEEEe
Q 012987 287 DVGLHGLEVY 296 (452)
Q Consensus 287 ~~GldGIEV~ 296 (452)
++|+||||+.
T Consensus 163 ~aGfDgVEih 172 (349)
T 3hgj_A 163 RAGFQVIELH 172 (349)
T ss_dssp HTTCCEEEEE
T ss_pred HcCCCEEEEC
No 65
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=40.09 E-value=35 Score=31.16 Aligned_cols=14 Identities=14% Similarity=0.351 Sum_probs=9.2
Q ss_pred CCHHHHHHHHHHcC
Q 012987 251 PLAEVAVQLIHRTG 264 (452)
Q Consensus 251 ~~~eeaI~~I~~aG 264 (452)
.+++++++.++++|
T Consensus 14 ~~~~~~l~~~~~~G 27 (278)
T 1i60_A 14 SNLKLDLELCEKHG 27 (278)
T ss_dssp CCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHhC
Confidence 45666777666665
No 66
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=39.93 E-value=25 Score=33.44 Aligned_cols=56 Identities=7% Similarity=0.100 Sum_probs=37.0
Q ss_pred CCceEEceeeeCCCCCC------------CCCHHHHHHHHHHcCCcEEEEecCCCCCC--HHHHHHHHHhC
Q 012987 70 DNNVVFELHSHSNFSDG------------YLSPSKLVERAHCNGVKVLALTDHDTMSG--IPEAIETARRF 126 (452)
Q Consensus 70 ~~~~~vDLH~HT~~SDG------------~~sp~elv~~A~~~Gl~~iaITDHdt~~g--~~~~~~~a~~~ 126 (452)
..++.+|-|+|-...+- ..+++++++.+.+.|++.+.+.-=+ ..+ ...+.++++++
T Consensus 23 ~p~~~iDtH~Hl~~~~~p~~~~~~~~p~~~~~~e~~l~~~~~~GV~~~V~v~~~-~~~~~n~~~~~~~~~~ 92 (294)
T 4i6k_A 23 MKMNCIDTHAHVFSTQDHSIETARYAPDYEATVQSFISHLDEHNFTHGVLVQPS-FLGTNNQAMLNAIQQY 92 (294)
T ss_dssp --CCSEEEEECCBCTTSCCCTTCSCCCCSCBCHHHHHHHHHHTTCCEEEEECCG-GGTTCCHHHHHHHHHS
T ss_pred CCCCceEeeeEeecCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCeEEEecCc-ccccchHHHHHHHHHC
Confidence 34567999999864311 4689999999999999998887321 111 23345555555
No 67
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=39.92 E-value=37 Score=31.55 Aligned_cols=49 Identities=10% Similarity=0.134 Sum_probs=34.4
Q ss_pred HHHHHHHHHcCCcEEEEeCCCC---ChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeeec-cCCCC
Q 012987 279 AAIIRKLKDVGLHGLEVYRSDG---KLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGG-SDYHG 344 (452)
Q Consensus 279 ~~li~~l~~~GldGIEV~~~~~---~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgG-SDfHg 344 (452)
.+.++.++++|++|||+..... +..+. ..+.++++++||-+++. +.+++
T Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~-----------------~~~~~~l~~~gl~~~~~~~~~~g 76 (290)
T 3tva_A 24 GVHLEVAQDLKVPTVQVHAPHPHTRTREHA-----------------QAFRAKCDAAGIQVTVIFGGFDG 76 (290)
T ss_dssp SBCHHHHHHTTCSEEEEECCCGGGCSHHHH-----------------HHHHHHHHHTTCEEEEEECCCTT
T ss_pred HHHHHHHHHcCCCEEEecCCCCCcCCHHHH-----------------HHHHHHHHHcCCEEEEEeeccCC
Confidence 3567888999999999997532 12222 26889999999987764 34454
No 68
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=39.12 E-value=36 Score=33.93 Aligned_cols=23 Identities=26% Similarity=0.221 Sum_probs=17.7
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012987 252 LAEVAVQLIHRTGGLAV--LAHPWA 274 (452)
Q Consensus 252 ~~eeaI~~I~~aGGvaV--LAHP~~ 274 (452)
....+++.||+.|+.++ |.|+++
T Consensus 81 ~~~~~~~~vh~~G~~i~~QL~H~Gr 105 (363)
T 3l5l_A 81 AFVPVVQAIKAAGSVPGIQIAHAGR 105 (363)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHhcCCEEEEEeccCCc
Confidence 35678899999999877 677653
No 69
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=38.77 E-value=67 Score=31.23 Aligned_cols=81 Identities=14% Similarity=0.070 Sum_probs=52.2
Q ss_pred CCEEEEeCCCCCCCc--HHHHHHHHHcCCcEEEEeCCCCChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcC--Ceeeec
Q 012987 264 GGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYG--LLKLGG 339 (452)
Q Consensus 264 GGvaVLAHP~~~~~~--~~li~~l~~~GldGIEV~~~~~~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~g--Ll~tgG 339 (452)
|.++|+|+-+..... .++.+...+.|.||+=+..|++.+.+.. ++ ..|.++|+.-+ +++.-
T Consensus 75 grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~~~~s~~~----------l~----~~f~~va~a~~~~lPiil- 139 (313)
T 3dz1_A 75 KSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPPPSLRTDEQ----------IT----TYFRQATEAIGDDVPWVL- 139 (313)
T ss_dssp TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTCCSHHH----------HH----HHHHHHHHHHCTTSCEEE-
T ss_pred CCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHH----------HH----HHHHHHHHhCCCCCcEEE-
Confidence 889999998754322 2455566788999999998876544332 11 27888888876 76653
Q ss_pred cCCCCCCCCCCccCCCccCChhHHHHHh
Q 012987 340 SDYHGRGGHGESELGSVKLPVLVLNDFL 367 (452)
Q Consensus 340 SDfHg~~~~~~~~lG~~~~p~~~~~~~~ 367 (452)
||-|. ...+.++.+++.++.
T Consensus 140 --Yn~P~------~tg~~l~~~~~~~La 159 (313)
T 3dz1_A 140 --QDYPL------TLSVVMTPKVIRQIV 159 (313)
T ss_dssp --EECHH------HHCCCCCHHHHHHHH
T ss_pred --EeCcc------ccCcCCCHHHHHHHH
Confidence 44331 123456677777765
No 70
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=37.96 E-value=47 Score=33.29 Aligned_cols=23 Identities=22% Similarity=0.264 Sum_probs=17.5
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012987 252 LAEVAVQLIHRTGGLAV--LAHPWA 274 (452)
Q Consensus 252 ~~eeaI~~I~~aGGvaV--LAHP~~ 274 (452)
....+++.||+.|+.++ |.|+++
T Consensus 92 ~~k~l~~avh~~G~~i~~QL~H~Gr 116 (376)
T 1icp_A 92 AWKPIVDAVHAKGGIFFCQIWHVGR 116 (376)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCTT
T ss_pred HHHHHHHHHHhcCCeEEEEeecCCC
Confidence 35678889999999766 788554
No 71
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=37.50 E-value=52 Score=31.44 Aligned_cols=50 Identities=24% Similarity=0.208 Sum_probs=31.9
Q ss_pred HHHHHHHHcCCcEEEEeCCCCChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCe---eeec
Q 012987 280 AIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLL---KLGG 339 (452)
Q Consensus 280 ~li~~l~~~GldGIEV~~~~~~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl---~tgG 339 (452)
..++.++++|++|||+........... .+. .....+.++++++||- +++.
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~~~~~~~~----~~~------~~~~~l~~~l~~~gL~~~~i~~~ 87 (335)
T 2qw5_A 35 AHIKKLQRFGYSGFEFPIAPGLPENYA----QDL------ENYTNLRHYLDSEGLENVKISTN 87 (335)
T ss_dssp HHHHHHHHTTCCEEEEECCCCCGGGHH----HHH------HHHHHHHHHHHHTTCTTCEEEEE
T ss_pred HHHHHHHHhCCCEEEEecCCCcccccc----cch------HHHHHHHHHHHHCCCCcceeEEE
Confidence 678888999999999986533211000 000 0112678889999998 7764
No 72
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=37.41 E-value=27 Score=32.38 Aligned_cols=64 Identities=11% Similarity=0.084 Sum_probs=40.4
Q ss_pred eEEceeeeCCCCC---------CCCC---HHHHHHHHHHcCCcEEEEecCCCC-CCHHHHHHHHHhCCCeEEEEEEE
Q 012987 73 VVFELHSHSNFSD---------GYLS---PSKLVERAHCNGVKVLALTDHDTM-SGIPEAIETARRFGMKIIPGVEI 136 (452)
Q Consensus 73 ~~vDLH~HT~~SD---------G~~s---p~elv~~A~~~Gl~~iaITDHdt~-~g~~~~~~~a~~~gi~vI~GiEi 136 (452)
-.+|.|+|-.... ...+ +.+.+++|.+.|+..+..+-++.. ..+..+.+.+++.|+.+++++-+
T Consensus 6 G~iD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~ 82 (291)
T 1bf6_A 6 GYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGY 82 (291)
T ss_dssp SEEEEEECSSEECHHHHTCGGGEECCHHHHHHHHHHHHHTTEEEEEECCCGGGTCCHHHHHHHHHHHCCEEEEEECC
T ss_pred ceeeeccCeecCCcccccCCCcccCCHHHHHHHHHHHHHcCCCEEEecCCCcCCCCHHHHHHHHHhcCCeEEEeecc
Confidence 5789999976321 1122 234667788999998765554323 23666777777778777665433
No 73
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=37.09 E-value=88 Score=29.31 Aligned_cols=44 Identities=9% Similarity=0.082 Sum_probs=30.1
Q ss_pred cHHHHHHHHHcCCcEEEEeCCCCC--------hhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCC-eeee
Q 012987 278 PAAIIRKLKDVGLHGLEVYRSDGK--------LVDVNFLEKIDNFLLLLCLRQITYTDLADTYGL-LKLG 338 (452)
Q Consensus 278 ~~~li~~l~~~GldGIEV~~~~~~--------~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gL-l~tg 338 (452)
....++.+++.|++|||++..... ..+. ..+.++++++|| .+++
T Consensus 20 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~-----------------~~~~~~l~~~gl~~~~~ 72 (303)
T 3aal_A 20 LLAASEEAASYGANTFMIYTGAPQNTKRKSIEELNI-----------------EAGRQHMQAHGIEEIVV 72 (303)
T ss_dssp HHHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCH-----------------HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHH-----------------HHHHHHHHHcCCceEEE
Confidence 567788889999999999632210 1111 267888999999 5554
No 74
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=37.02 E-value=41 Score=36.11 Aligned_cols=23 Identities=39% Similarity=0.410 Sum_probs=18.0
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012987 252 LAEVAVQLIHRTGGLAV--LAHPWA 274 (452)
Q Consensus 252 ~~eeaI~~I~~aGGvaV--LAHP~~ 274 (452)
...++++.||+.|+.++ |.|+++
T Consensus 90 ~~~~~~~~vh~~g~~i~~Ql~h~Gr 114 (690)
T 3k30_A 90 ALKRIADAIHEGGGLAGIELAHNGM 114 (690)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHhcCCEEEEEccCCcc
Confidence 45778899999999866 688654
No 75
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=36.82 E-value=67 Score=32.53 Aligned_cols=23 Identities=22% Similarity=0.222 Sum_probs=17.5
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012987 252 LAEVAVQLIHRTGGLAV--LAHPWA 274 (452)
Q Consensus 252 ~~eeaI~~I~~aGGvaV--LAHP~~ 274 (452)
....+++.||+.|+.++ |.|+++
T Consensus 94 ~~k~l~~avh~~G~~i~~QL~H~Gr 118 (402)
T 2hsa_B 94 EWKKIVDVVHAKGAVIFCQLWHVGR 118 (402)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCTT
T ss_pred HHHHHHHHHHhcCCeEEEEeccCCc
Confidence 35678889999999766 788654
No 76
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=35.21 E-value=31 Score=32.10 Aligned_cols=41 Identities=15% Similarity=0.043 Sum_probs=28.5
Q ss_pred CCCHHHHHHHHHHcCCEEE-EeCCCCCCCcHHHHHHHHHcCCcE
Q 012987 250 EPLAEVAVQLIHRTGGLAV-LAHPWALKNPAAIIRKLKDVGLHG 292 (452)
Q Consensus 250 ~~~~eeaI~~I~~aGGvaV-LAHP~~~~~~~~li~~l~~~GldG 292 (452)
..+++++++.++++|--.| +.+++. ....+-+.+.+.||.-
T Consensus 30 ~~~~~~~l~~~~~~G~~~vEl~~~~~--~~~~~~~~l~~~gl~~ 71 (301)
T 3cny_A 30 DNNLQQLLSDIVVAGFQGTEVGGFFP--GPEKLNYELKLRNLEI 71 (301)
T ss_dssp TCCHHHHHHHHHHHTCCEECCCTTCC--CHHHHHHHHHHTTCEE
T ss_pred CCCHHHHHHHHHHhCCCEEEecCCCC--CHHHHHHHHHHCCCeE
Confidence 4689999999999986555 446553 4455666677778753
No 77
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=35.10 E-value=1.4e+02 Score=32.88 Aligned_cols=82 Identities=12% Similarity=0.084 Sum_probs=53.7
Q ss_pred CCCCHHHHHHHHHHcCCEEEEeCCCCC------CCcHHHHHHHHHcCCcEEEEeCC-----CCC----hhhhhhhhhhhh
Q 012987 249 SEPLAEVAVQLIHRTGGLAVLAHPWAL------KNPAAIIRKLKDVGLHGLEVYRS-----DGK----LVDVNFLEKIDN 313 (452)
Q Consensus 249 ~~~~~eeaI~~I~~aGGvaVLAHP~~~------~~~~~li~~l~~~GldGIEV~~~-----~~~----~~~~~~l~~~~n 313 (452)
...+++|+++..++-|=-+++=|-+.- ...+..++.+.+.|+.||=+=.= ... ..-++.
T Consensus 416 pd~Dl~eL~~YA~sKGV~iilw~~t~~~~~n~e~~~d~~f~~~~~~Gv~GVKvdF~g~~~~r~~~h~~Q~~v~~------ 489 (738)
T 2d73_A 416 PDFDVKEIHRYAARKGIKMMMHHETSASVRNYERHMDKAYQFMADNGYNSVKSGYVGNIIPRGEHHYGQWMNNH------ 489 (738)
T ss_dssp TTCCHHHHHHHHHHTTCEEEEEEECTTBHHHHHHHHHHHHHHHHHTTCCEEEEECCSSCBSTTCCTTSHHHHHH------
T ss_pred CCCCHHHHHHHHHhCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHcCCCEEEeCccccCcCCcccccchHHHHH------
Confidence 346799999999998744444444432 11345677788999999999553 111 111111
Q ss_pred HHHHHhhHHHHHHHHHHHcCCeeeeccCCCCCCCC
Q 012987 314 FLLLLCLRQITYTDLADTYGLLKLGGSDYHGRGGH 348 (452)
Q Consensus 314 ~~~l~~~~~~~~~~lA~~~gLl~tgGSDfHg~~~~ 348 (452)
+ ..+.+-|.+|+|++ ||||+.+|
T Consensus 490 ------Y--~~i~~~AA~~~LmV----nfHg~~kP 512 (738)
T 2d73_A 490 ------Y--LYAVKKAADYKIMV----NAHEATRP 512 (738)
T ss_dssp ------H--HHHHHHHHHTTCEE----EETTSCCC
T ss_pred ------H--HHHHHHHHHcCcEE----EccCCcCC
Confidence 0 15678899999998 79998654
No 78
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=34.70 E-value=44 Score=31.80 Aligned_cols=13 Identities=8% Similarity=0.138 Sum_probs=6.3
Q ss_pred CHHHHHHHHHHcC
Q 012987 252 LAEVAVQLIHRTG 264 (452)
Q Consensus 252 ~~eeaI~~I~~aG 264 (452)
+++++++.++++|
T Consensus 37 ~l~~~l~~aa~~G 49 (305)
T 3obe_A 37 DMPNGLNRLAKAG 49 (305)
T ss_dssp THHHHHHHHHHHT
T ss_pred CHHHHHHHHHHcC
Confidence 3445555555444
No 79
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=34.59 E-value=55 Score=33.43 Aligned_cols=23 Identities=17% Similarity=0.163 Sum_probs=17.7
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012987 252 LAEVAVQLIHRTGGLAV--LAHPWA 274 (452)
Q Consensus 252 ~~eeaI~~I~~aGGvaV--LAHP~~ 274 (452)
....+++.||+.|+.++ |.|+++
T Consensus 93 ~~k~l~~avH~~G~~i~~QL~H~Gr 117 (407)
T 3tjl_A 93 AWKVITDKVHANGSFVSTQLIFLGR 117 (407)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHhcCCEEEEEeccCCC
Confidence 34678899999999877 678764
No 80
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=34.34 E-value=30 Score=32.71 Aligned_cols=45 Identities=20% Similarity=0.272 Sum_probs=31.8
Q ss_pred cHHHHHHHHHcCCcEEEEeCCC-CC--hhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeeecc
Q 012987 278 PAAIIRKLKDVGLHGLEVYRSD-GK--LVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGGS 340 (452)
Q Consensus 278 ~~~li~~l~~~GldGIEV~~~~-~~--~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgGS 340 (452)
... ++.+++.|++|||+.... .. ..+. ..+.++++++||-+++..
T Consensus 39 l~~-l~~~~~~G~~~vEl~~~~~~~~~~~~~-----------------~~l~~~l~~~gl~i~~~~ 86 (309)
T 2hk0_A 39 GPY-IEKVAKLGFDIIEVAAHHINEYSDAEL-----------------ATIRKSAKDNGIILTAGI 86 (309)
T ss_dssp HHH-HHHHHHTTCSEEEEEHHHHTTSCHHHH-----------------HHHHHHHHHTTCEEEEEC
T ss_pred HHH-HHHHHHhCCCEEEeccCCccccchhhH-----------------HHHHHHHHHcCCeEEEec
Confidence 356 888889999999998532 11 1221 267888999999888854
No 81
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=34.08 E-value=73 Score=29.15 Aligned_cols=44 Identities=5% Similarity=0.152 Sum_probs=30.4
Q ss_pred CCcHHHHHHHHHcCCcEEEEeCCCC--------ChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCee
Q 012987 276 KNPAAIIRKLKDVGLHGLEVYRSDG--------KLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLK 336 (452)
Q Consensus 276 ~~~~~li~~l~~~GldGIEV~~~~~--------~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~ 336 (452)
......++.+++.|++|||++.... +..+. ..+.++++++||-+
T Consensus 12 ~~l~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~-----------------~~~~~~l~~~gl~~ 63 (285)
T 1qtw_A 12 GGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTI-----------------DEFKAACEKYHYTS 63 (285)
T ss_dssp TCHHHHHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHH-----------------HHHHHHHHHTTCCG
T ss_pred cCHHHHHHHHHHcCCCEEEeeCCCCCcCcCCCCCHHHH-----------------HHHHHHHHHcCCCc
Confidence 3456788888999999999963211 11222 26788899999973
No 82
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=33.89 E-value=48 Score=30.17 Aligned_cols=53 Identities=13% Similarity=0.201 Sum_probs=37.1
Q ss_pred CceEEceeeeCCCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeE
Q 012987 71 NNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKI 130 (452)
Q Consensus 71 ~~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~v 130 (452)
.++.+|+|.|. .|+..++.+.+.|.+.+.+-+-..-....++.+.+++.|+.+
T Consensus 60 ~~i~ld~~l~d-------~p~~~~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~ 112 (218)
T 3jr2_A 60 HILVCDMKTTD-------GGAILSRMAFEAGADWITVSAAAHIATIAACKKVADELNGEI 112 (218)
T ss_dssp SEEEEEEEECS-------CHHHHHHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEE
T ss_pred CcEEEEEeecc-------cHHHHHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCcc
Confidence 36788999873 367789999999999998854332112345666777777654
No 83
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=33.78 E-value=48 Score=30.03 Aligned_cols=45 Identities=4% Similarity=-0.080 Sum_probs=35.5
Q ss_pred CCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeEEE
Q 012987 87 YLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIP 132 (452)
Q Consensus 87 ~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI~ 132 (452)
..++++.++.+++.|++.|-+.-... ....++.+.+++.|+.+..
T Consensus 14 ~~~~~~~l~~~~~~G~~~vEl~~~~~-~~~~~~~~~l~~~gl~~~~ 58 (260)
T 1k77_A 14 EVPFIERFAAARKAGFDAVEFLFPYN-YSTLQIQKQLEQNHLTLAL 58 (260)
T ss_dssp TSCGGGHHHHHHHHTCSEEECSCCTT-SCHHHHHHHHHHTTCEEEE
T ss_pred CCCHHHHHHHHHHhCCCEEEecCCCC-CCHHHHHHHHHHcCCceEE
Confidence 57899999999999999999875322 2367778888889988753
No 84
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=33.47 E-value=75 Score=31.60 Aligned_cols=23 Identities=17% Similarity=0.109 Sum_probs=17.2
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012987 252 LAEVAVQLIHRTGGLAV--LAHPWA 274 (452)
Q Consensus 252 ~~eeaI~~I~~aGGvaV--LAHP~~ 274 (452)
....+++.||+.|+.++ |.|+++
T Consensus 82 ~~~~l~~~vh~~g~~i~~QL~H~Gr 106 (365)
T 2gou_A 82 GWRIVTEAVHAKGCAIFAQLWHVGR 106 (365)
T ss_dssp HHHHHHHHHHHHSCEEEEEEECCTT
T ss_pred HHHHHHHHHHhcCCeEEEEeecCCC
Confidence 35678889999999755 788554
No 85
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=33.21 E-value=82 Score=30.55 Aligned_cols=82 Identities=11% Similarity=0.156 Sum_probs=53.7
Q ss_pred cCCEEEEeCCCCCCCc--HHHHHHHHHcCCcEEEEeCCCC----ChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCee
Q 012987 263 TGGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG----KLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLK 336 (452)
Q Consensus 263 aGGvaVLAHP~~~~~~--~~li~~l~~~GldGIEV~~~~~----~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~ 336 (452)
.|.++|+|+-+..... .++.+...+.|.||+=+..|++ .+.+... + ..|.++|+.-++++
T Consensus 75 ~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l----------~----~~f~~va~a~~lPi 140 (309)
T 3fkr_A 75 AGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPYHGATFRVPEAQI----------F----EFYARVSDAIAIPI 140 (309)
T ss_dssp TTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHH----------H----HHHHHHHHHCSSCE
T ss_pred CCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHH----------H----HHHHHHHHhcCCCE
Confidence 4679999998765322 2455666789999999998875 3333221 1 27889999888876
Q ss_pred eeccCCCCCCCCCCccCCCccCChhHHHHHhc
Q 012987 337 LGGSDYHGRGGHGESELGSVKLPVLVLNDFLK 368 (452)
Q Consensus 337 tgGSDfHg~~~~~~~~lG~~~~p~~~~~~~~~ 368 (452)
.- ||-| . ..+.++.+++.++.+
T Consensus 141 il---Yn~P-----~--tg~~l~~~~~~~La~ 162 (309)
T 3fkr_A 141 MV---QDAP-----A--SGTALSAPFLARMAR 162 (309)
T ss_dssp EE---EECG-----G--GCCCCCHHHHHHHHH
T ss_pred EE---EeCC-----C--CCCCCCHHHHHHHHh
Confidence 64 4443 1 235677777777753
No 86
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=33.05 E-value=77 Score=31.45 Aligned_cols=61 Identities=16% Similarity=0.125 Sum_probs=39.3
Q ss_pred eEEceeeeCCCC--CC---------------------CCCHHHH-------HHHHHHcCCcEEEEecCCCCCCHHHHHHH
Q 012987 73 VVFELHSHSNFS--DG---------------------YLSPSKL-------VERAHCNGVKVLALTDHDTMSGIPEAIET 122 (452)
Q Consensus 73 ~~vDLH~HT~~S--DG---------------------~~sp~el-------v~~A~~~Gl~~iaITDHdt~~g~~~~~~~ 122 (452)
=+||.|+|...+ .| ..+++++ +..+.+.|+..+. |+. .....+.+.
T Consensus 87 GlID~H~H~~~~~~~g~~~~~~l~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~--d~~--~~~~~~~~~ 162 (468)
T 3lnp_A 87 GWVNAHGHAAMSLFRGLADDLPLMTWLQEHVWPAEAQHVDEHFVKQGTELAIAEMIQSGTTTFA--DMY--FYPQQSGEA 162 (468)
T ss_dssp CEEECSCCGGGGGGTTSSCSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEE--ECC--SCHHHHHHH
T ss_pred CeechhhChhhhhhccCcCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEE--Ecc--cCHHHHHHH
Confidence 389999999544 22 2566654 4456778877654 552 223555667
Q ss_pred HHhCCCeEEEEEEEE
Q 012987 123 ARRFGMKIIPGVEIS 137 (452)
Q Consensus 123 a~~~gi~vI~GiEis 137 (452)
+.+.|+..+.+..+.
T Consensus 163 ~~~~g~r~~~~~~~~ 177 (468)
T 3lnp_A 163 ALAAGIRAVCFAPVL 177 (468)
T ss_dssp HHHHTCEEEEEEEEC
T ss_pred HHHcCCeEEEecccc
Confidence 777898888776654
No 87
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=32.85 E-value=56 Score=30.23 Aligned_cols=43 Identities=12% Similarity=0.013 Sum_probs=35.8
Q ss_pred CCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeE
Q 012987 88 LSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKI 130 (452)
Q Consensus 88 ~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~v 130 (452)
.++++.++.+++.|++.|-+.-.+.-....++.+.+++.||.+
T Consensus 38 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gl~v 80 (287)
T 3kws_A 38 ESLNEKLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNGRNIKV 80 (287)
T ss_dssp SSHHHHHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTTSSCEE
T ss_pred CCHHHHHHHHHHcCCCEEEecCCchHHHHHHHHHHHHHcCCeE
Confidence 6999999999999999999987754445677777888888876
No 88
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=32.58 E-value=17 Score=33.53 Aligned_cols=17 Identities=12% Similarity=0.212 Sum_probs=7.9
Q ss_pred HHHHHHHHcCCcEEEEe
Q 012987 280 AIIRKLKDVGLHGLEVY 296 (452)
Q Consensus 280 ~li~~l~~~GldGIEV~ 296 (452)
+.++.+++.|++|||+.
T Consensus 20 ~~l~~~~~~G~~~vEl~ 36 (281)
T 3u0h_A 20 LYLDLARETGYRYVDVP 36 (281)
T ss_dssp HHHHHHHHTTCSEECCC
T ss_pred HHHHHHHHcCCCEEEec
Confidence 34444444455555544
No 89
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=31.63 E-value=32 Score=32.37 Aligned_cols=14 Identities=14% Similarity=0.088 Sum_probs=6.9
Q ss_pred CCHHHHHHHHHHcC
Q 012987 251 PLAEVAVQLIHRTG 264 (452)
Q Consensus 251 ~~~eeaI~~I~~aG 264 (452)
.+++++++.++++|
T Consensus 36 ~~~~~~l~~a~~~G 49 (296)
T 2g0w_A 36 VSFPKRVKVAAENG 49 (296)
T ss_dssp SCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHcC
Confidence 34555555555444
No 90
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=31.56 E-value=1e+02 Score=29.03 Aligned_cols=52 Identities=25% Similarity=0.238 Sum_probs=32.3
Q ss_pred CcHHHHHHHHHcCCcEEEEeCC-CC-ChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeee
Q 012987 277 NPAAIIRKLKDVGLHGLEVYRS-DG-KLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLG 338 (452)
Q Consensus 277 ~~~~li~~l~~~GldGIEV~~~-~~-~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tg 338 (452)
...+.++.+++.|++|||+... .+ ...... .+ ......+.++++++||-+++
T Consensus 16 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~----~~------~~~~~~~~~~l~~~gl~i~~ 69 (340)
T 2zds_A 16 PLEEVCRLARDFGYDGLELACWGDHFEVDKAL----AD------PSYVDSRHQLLDKYGLKCWA 69 (340)
T ss_dssp CHHHHHHHHHHHTCSEEEEESSTTTCCHHHHH----HC------TTHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHcCCCEEEeccccccCCccccc----cC------HHHHHHHHHHHHHcCCeEEE
Confidence 3467788889999999999852 22 221000 00 00112678899999998864
No 91
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=31.30 E-value=38 Score=32.22 Aligned_cols=45 Identities=31% Similarity=0.454 Sum_probs=31.0
Q ss_pred cHHHHHHHHHcCCcEEEEeCCC-C--ChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeeec
Q 012987 278 PAAIIRKLKDVGLHGLEVYRSD-G--KLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGG 339 (452)
Q Consensus 278 ~~~li~~l~~~GldGIEV~~~~-~--~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgG 339 (452)
....++.++++|++|||++... + ...+. ..+.++++++||-+++.
T Consensus 31 ~~~~l~~~a~~G~~~VEl~~~~~~~~~~~~~-----------------~~~~~~l~~~GL~v~~~ 78 (303)
T 3l23_A 31 VAANLRKVKDMGYSKLELAGYGKGAIGGVPM-----------------MDFKKMAEDAGLKIISS 78 (303)
T ss_dssp HHHHHHHHHHTTCCEEEECCEETTEETTEEH-----------------HHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEeccccCcccCCCCH-----------------HHHHHHHHHcCCeEEEE
Confidence 4567888889999999997521 1 11111 15788899999988653
No 92
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=30.74 E-value=1.4e+02 Score=27.38 Aligned_cols=63 Identities=19% Similarity=0.130 Sum_probs=44.9
Q ss_pred CCCCHHHHHHHHHHcCCEEEEeCCCCC---CCcHHHHHHHHH-cCCcEEEEeCCCCChhhhhhhhhhhhHHHHHhhHHHH
Q 012987 249 SEPLAEVAVQLIHRTGGLAVLAHPWAL---KNPAAIIRKLKD-VGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQIT 324 (452)
Q Consensus 249 ~~~~~eeaI~~I~~aGGvaVLAHP~~~---~~~~~li~~l~~-~GldGIEV~~~~~~~~~~~~l~~~~n~~~l~~~~~~~ 324 (452)
+-.++.++++.++++|=.+++ ||... .....-+..|+. .+.|||=--++ .
T Consensus 39 ~i~~l~~~v~~lk~~~K~v~V-h~Dli~Gls~d~~ai~fL~~~~~pdGIIsTk~-------------------------~ 92 (192)
T 3kts_A 39 HVAQLKALVKYAQAGGKKVLL-HADLVNGLKNDDYAIDFLCTEICPDGIISTRG-------------------------N 92 (192)
T ss_dssp ETTTHHHHHHHHHHTTCEEEE-EGGGEETCCCSHHHHHHHHHTTCCSEEEESCH-------------------------H
T ss_pred cHHHHHHHHHHHHHcCCeEEE-ecCchhccCCcHHHHHHHHhCCCCCEEEeCcH-------------------------H
Confidence 346899999999999998888 99643 344556666665 37888643331 4
Q ss_pred HHHHHHHcCCeee
Q 012987 325 YTDLADTYGLLKL 337 (452)
Q Consensus 325 ~~~lA~~~gLl~t 337 (452)
....|++.||...
T Consensus 93 ~i~~Ak~~gL~tI 105 (192)
T 3kts_A 93 AIMKAKQHKMLAI 105 (192)
T ss_dssp HHHHHHHTTCEEE
T ss_pred HHHHHHHCCCeEE
Confidence 6677888888764
No 93
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=30.55 E-value=1.1e+02 Score=33.05 Aligned_cols=82 Identities=18% Similarity=0.224 Sum_probs=54.2
Q ss_pred CCCCHHHHHHHHHHcCCEEEEeCC-CCC-CCcHHHHHHHHHcCCcEEEEeCCCCChhh-hhhhhhhhhHHHHHhhHHHHH
Q 012987 249 SEPLAEVAVQLIHRTGGLAVLAHP-WAL-KNPAAIIRKLKDVGLHGLEVYRSDGKLVD-VNFLEKIDNFLLLLCLRQITY 325 (452)
Q Consensus 249 ~~~~~eeaI~~I~~aGGvaVLAHP-~~~-~~~~~li~~l~~~GldGIEV~~~~~~~~~-~~~l~~~~n~~~l~~~~~~~~ 325 (452)
....++++++..|+-|=-.++=|- ..+ ...+..++.+.+.|++||=+-.-.....+ ++++ ..+
T Consensus 345 p~~di~~l~~Ya~~kgV~i~lw~~~~~~~~~~~~~~~~~~~~Gv~gvK~Df~~~~~Q~~v~~y--------------~~i 410 (641)
T 3a24_A 345 KEIDLKELVDYAASKNVGIILWAGYHAFERDMENVCRHYAEMGVKGFKVDFMDRDDQEMTAFN--------------YRA 410 (641)
T ss_dssp TTCCHHHHHHHHHHTTCEEEEEEEHHHHHTSHHHHHHHHHHHTCCEEEEECCCCCSHHHHHHH--------------HHH
T ss_pred CcCCHHHHHHHHHhcCCEEEEEeeCcchHHHHHHHHHHHHHcCCCEEEECCCCCCcHHHHHHH--------------HHH
Confidence 346799999999998833333332 222 23456788889999999999664333222 1110 156
Q ss_pred HHHHHHcCCeeeeccCCCCCCCC
Q 012987 326 TDLADTYGLLKLGGSDYHGRGGH 348 (452)
Q Consensus 326 ~~lA~~~gLl~tgGSDfHg~~~~ 348 (452)
.+-|.+|+|+ -||||+.++
T Consensus 411 ~~~aA~~~l~----V~fHg~~~P 429 (641)
T 3a24_A 411 AEMCAKYKLI----LDLHGTHKP 429 (641)
T ss_dssp HHHHHHTTCE----EEECSCCCC
T ss_pred HHHHHHcCCE----EEcCCCcCC
Confidence 6778899988 589998754
No 94
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=30.33 E-value=1e+02 Score=30.27 Aligned_cols=62 Identities=19% Similarity=0.208 Sum_probs=39.7
Q ss_pred ceEEceeeeCCCC--CC---------------------CCCHHH-------HHHHHHHcCCcEEEEecCCCCCCHHHHHH
Q 012987 72 NVVFELHSHSNFS--DG---------------------YLSPSK-------LVERAHCNGVKVLALTDHDTMSGIPEAIE 121 (452)
Q Consensus 72 ~~~vDLH~HT~~S--DG---------------------~~sp~e-------lv~~A~~~Gl~~iaITDHdt~~g~~~~~~ 121 (452)
+-+||.|+|...+ .| ..++++ .+..+.+.|+..+. |+ ......+.+
T Consensus 64 PGlID~H~Hl~~~~~~g~~~~~~~~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~--d~--~~~~~~~~~ 139 (447)
T 4f0r_A 64 PGLINLHGHSAMSLLRGLADDKALMDWLTNYIWPTEGKHVHDDFVFDGSLLAMGEMIRGGTTTIN--DM--YFYNAAVAR 139 (447)
T ss_dssp ECEEEEEECGGGGGGTTSSCSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEE--EC--BSCHHHHHH
T ss_pred eCccchhhChhhHhhccCCCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEE--Ec--ccCHHHHHH
Confidence 4489999999554 22 255664 44556778987665 44 223455666
Q ss_pred HHHhCCCeEEEEEEEE
Q 012987 122 TARRFGMKIIPGVEIS 137 (452)
Q Consensus 122 ~a~~~gi~vI~GiEis 137 (452)
.+.+.|+..+.+..+.
T Consensus 140 ~~~~~g~r~~~~~~~~ 155 (447)
T 4f0r_A 140 AGLASGMRTFVGCSIL 155 (447)
T ss_dssp HHHHHTCEEEEEEEEC
T ss_pred HHHHcCCeEEEEchhc
Confidence 7777898887776654
No 95
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=30.18 E-value=1.4e+02 Score=28.79 Aligned_cols=95 Identities=16% Similarity=0.123 Sum_probs=56.2
Q ss_pred CCHHH---HHHHHHHc--CCEEEEeCCCCCCCc--HHHHHHHHHcCCcEEEEeCCCCCh---hhhhhhhhhhhHHHHHhh
Q 012987 251 PLAEV---AVQLIHRT--GGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDGKL---VDVNFLEKIDNFLLLLCL 320 (452)
Q Consensus 251 ~~~ee---aI~~I~~a--GGvaVLAHP~~~~~~--~~li~~l~~~GldGIEV~~~~~~~---~~~~~l~~~~n~~~l~~~ 320 (452)
++.+| +++.+.++ |.++|+||-+..... .++.+...+.|.||+=+..|++.. .+.. ++
T Consensus 64 Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~s~~~----------l~-- 131 (307)
T 3s5o_A 64 LTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAA----------LI-- 131 (307)
T ss_dssp SCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCTTGGGCCHHH----------HH--
T ss_pred CCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCcCCCCCCHHH----------HH--
Confidence 45544 44444443 779999998754322 244556678999999998886532 2222 11
Q ss_pred HHHHHHHHHHHcCCeeeeccCCCCCCCCCCccCCCccCChhHHHHHhc
Q 012987 321 RQITYTDLADTYGLLKLGGSDYHGRGGHGESELGSVKLPVLVLNDFLK 368 (452)
Q Consensus 321 ~~~~~~~lA~~~gLl~tgGSDfHg~~~~~~~~lG~~~~p~~~~~~~~~ 368 (452)
..|.++|+.-++++.- ||-|. . ..+.++.+++.++.+
T Consensus 132 --~~f~~ia~a~~lPiil---Yn~P~-----~-tg~~l~~~~~~~La~ 168 (307)
T 3s5o_A 132 --HHYTKVADLSPIPVVL---YSVPA-----N-TGLDLPVDAVVTLSQ 168 (307)
T ss_dssp --HHHHHHHHHCSSCEEE---EECHH-----H-HSCCCCHHHHHHHHT
T ss_pred --HHHHHHHhhcCCCEEE---EeCCc-----c-cCCCCCHHHHHHHhc
Confidence 2678888877776652 33331 1 124566666666653
No 96
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=29.99 E-value=1.1e+02 Score=27.72 Aligned_cols=46 Identities=13% Similarity=0.134 Sum_probs=35.6
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEecCC------CCCCHHHHHHHHHhCCCeEE
Q 012987 86 GYLSPSKLVERAHCNGVKVLALTDHD------TMSGIPEAIETARRFGMKII 131 (452)
Q Consensus 86 G~~sp~elv~~A~~~Gl~~iaITDHd------t~~g~~~~~~~a~~~gi~vI 131 (452)
...++++.++.+++.|++.|-+.... .-....++.+.+++.||.+.
T Consensus 17 ~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~ 68 (272)
T 2q02_A 17 PGLSIEAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIV 68 (272)
T ss_dssp TTSCHHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEE
T ss_pred CCCCHHHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEE
Confidence 35789999999999999999997421 12356778888888998753
No 97
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=29.93 E-value=67 Score=31.69 Aligned_cols=62 Identities=15% Similarity=0.183 Sum_probs=39.4
Q ss_pred ceEEceeeeCCCC--CC---------------------CCCHHH-------HHHHHHHcCCcEEEEecCCCCCCHHHHHH
Q 012987 72 NVVFELHSHSNFS--DG---------------------YLSPSK-------LVERAHCNGVKVLALTDHDTMSGIPEAIE 121 (452)
Q Consensus 72 ~~~vDLH~HT~~S--DG---------------------~~sp~e-------lv~~A~~~Gl~~iaITDHdt~~g~~~~~~ 121 (452)
+=+||.|+|...+ .| ..++++ .+..+.+.|+..+. |+. .....+.+
T Consensus 66 PG~ID~H~H~~~~~~~g~~~~~~l~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~--d~~--~~~~~~~~ 141 (451)
T 4dyk_A 66 PGLVNAHGHSAMSLFRGLADDLPLMTWLQDHIWPAEGQWVSEDFIRDGTELAIAEQVKGGITCFS--DMY--FYPQAICG 141 (451)
T ss_dssp ECEEECCCCGGGGGGTTSSCSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEE--EEC--SCHHHHHH
T ss_pred ecccchhhChhhHHhccCCCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEE--Ecc--cCHHHHHH
Confidence 3479999999544 22 255653 33445588877664 552 23455666
Q ss_pred HHHhCCCeEEEEEEEE
Q 012987 122 TARRFGMKIIPGVEIS 137 (452)
Q Consensus 122 ~a~~~gi~vI~GiEis 137 (452)
++.+.|+..+.+..+.
T Consensus 142 a~~~~g~r~~~~~~~~ 157 (451)
T 4dyk_A 142 VVHDSGVRAQVAIPVL 157 (451)
T ss_dssp HHHHHTCEEEEEEEEC
T ss_pred HHHHcCCeEEEEchhh
Confidence 6777899888777664
No 98
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=29.90 E-value=62 Score=29.93 Aligned_cols=46 Identities=15% Similarity=0.133 Sum_probs=34.6
Q ss_pred CCCHHHHHHHHHHcCCcEEEEecCCC--C--CCHHHHHHHHHhCCCeEEE
Q 012987 87 YLSPSKLVERAHCNGVKVLALTDHDT--M--SGIPEAIETARRFGMKIIP 132 (452)
Q Consensus 87 ~~sp~elv~~A~~~Gl~~iaITDHdt--~--~g~~~~~~~a~~~gi~vI~ 132 (452)
..++++.++.+++.|++.|-+....- + ....++.+.+++.|+.+..
T Consensus 16 ~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 65 (294)
T 3vni_A 16 EADYKYYIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNGITLTV 65 (294)
T ss_dssp CCCHHHHHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CcCHHHHHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEE
Confidence 35899999999999999999985431 1 1245666777889988754
No 99
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A
Probab=29.75 E-value=85 Score=31.03 Aligned_cols=48 Identities=13% Similarity=0.181 Sum_probs=40.8
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeEEEEEEEE
Q 012987 85 DGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEIS 137 (452)
Q Consensus 85 DG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI~GiEis 137 (452)
|-.-+|+++++..+..|++.|=|-|-| +.+..+++..||+++.|+-.+
T Consensus 12 ~nlp~p~~Vv~llks~gi~~VRlY~~D-----~~vL~Al~~sgi~V~lGV~n~ 59 (323)
T 3ur8_A 12 NNLPSDQDVIKLYNANNIKKMRIYYPH-----TNVFNALKGSNIEIILDVPNQ 59 (323)
T ss_dssp SSCCCHHHHHHHHHHTTCCEEEESSCC-----HHHHHHHTTCCCEEEEEECGG
T ss_pred CCCCCHHHHHHHHHhCCCCeEEecCCC-----HHHHHHHHhcCCeEEEecccc
Confidence 445689999999999999999998876 677778888999999999753
No 100
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=29.08 E-value=2.1e+02 Score=26.81 Aligned_cols=46 Identities=15% Similarity=0.109 Sum_probs=35.1
Q ss_pred HHHHHHHHHHcCCEEEEeCCCCCCCcHHHHHHHHHcCCcEEEEeCCC
Q 012987 253 AEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSD 299 (452)
Q Consensus 253 ~eeaI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GldGIEV~~~~ 299 (452)
+.++.+.+.+.+=++|+-.... .....+.+.+.+.|+..||+-...
T Consensus 24 m~~~~~~l~~~~vv~Vir~~~~-~~a~~~a~al~~gGi~~iEvt~~t 69 (232)
T 4e38_A 24 MSTINNQLKALKVIPVIAIDNA-EDIIPLGKVLAENGLPAAEITFRS 69 (232)
T ss_dssp HHHHHHHHHHHCEEEEECCSSG-GGHHHHHHHHHHTTCCEEEEETTS
T ss_pred HHHHHHHHHhCCEEEEEEcCCH-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence 5678899999999999976532 223467778899999999996543
No 101
>1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1
Probab=28.91 E-value=1.3e+02 Score=31.65 Aligned_cols=60 Identities=22% Similarity=0.284 Sum_probs=40.1
Q ss_pred HHHHHHHHcCCcEEEEe--CC----C----CChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeeeccCCCCCCCCC
Q 012987 280 AIIRKLKDVGLHGLEVY--RS----D----GKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGGSDYHGRGGHG 349 (452)
Q Consensus 280 ~li~~l~~~GldGIEV~--~~----~----~~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgGSDfHg~~~~~ 349 (452)
.-+..|+.+|+|||+|- .. . .+..-- ..+.+++++.||-+-.==-||..+.
T Consensus 38 ~~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsgY-----------------~~L~~mv~~~GLKlq~vmSFHqCGg-- 98 (498)
T 1fa2_A 38 DELKQVKAGGCDGVMVDVWWGIIEAKGPKQYDWSAY-----------------RELFQLVKKCGLKIQAIMSFHQCGG-- 98 (498)
T ss_dssp HHHHHHHHTTCCEEEEEEEHHHHTCSBTTBCCCHHH-----------------HHHHHHHHHTTCEEEEEEECSCBCC--
T ss_pred HHHHHHHHcCCCEEEEEeEeeeeccCCCCccCcHHH-----------------HHHHHHHHHcCCeEEEEEEeeecCC--
Confidence 45778999999999982 11 1 122211 1678999999998877777998753
Q ss_pred CccCCC-cc--CCh
Q 012987 350 ESELGS-VK--LPV 360 (452)
Q Consensus 350 ~~~lG~-~~--~p~ 360 (452)
.+|. |. +|.
T Consensus 99 --NVGD~~~IPLP~ 110 (498)
T 1fa2_A 99 --NVGDAVFIPIPQ 110 (498)
T ss_dssp --CTTCCCCBCSCH
T ss_pred --CCCCcccccCCH
Confidence 4664 44 454
No 102
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=28.88 E-value=69 Score=31.89 Aligned_cols=23 Identities=17% Similarity=0.052 Sum_probs=16.4
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012987 252 LAEVAVQLIHRTGGLAV--LAHPWA 274 (452)
Q Consensus 252 ~~eeaI~~I~~aGGvaV--LAHP~~ 274 (452)
....+++.||+.|+.++ |.|+++
T Consensus 82 ~~~~l~~~vh~~g~~i~~QL~H~Gr 106 (364)
T 1vyr_A 82 AWKKITAGVHAEDGRIAVQLWHTGR 106 (364)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCTT
T ss_pred HHHHHHHHHHhcCCeEEEEeccCCc
Confidence 34677888899988655 778654
No 103
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=28.78 E-value=70 Score=31.63 Aligned_cols=44 Identities=23% Similarity=0.294 Sum_probs=31.0
Q ss_pred cHHHHHHHHHcCCcEEEEe----CCCCC-----hhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeee
Q 012987 278 PAAIIRKLKDVGLHGLEVY----RSDGK-----LVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLG 338 (452)
Q Consensus 278 ~~~li~~l~~~GldGIEV~----~~~~~-----~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tg 338 (452)
..+.++.+++.|++|||+. .+... ..+. ..+.++++++||-+++
T Consensus 35 ~~e~l~~aa~~G~~~vEl~~~~~~p~~~~~~e~~~~~-----------------~~l~~~l~~~GL~i~~ 87 (387)
T 1bxb_A 35 PVYVVHKLAELGAYGVNLHDEDLIPRGTPPQERDQIV-----------------RRFKKALDETGLKVPM 87 (387)
T ss_dssp HHHHHHHHHHHTCSEEEEEHHHHSCTTCCTTHHHHHH-----------------HHHHHHHHHHTCBCCE
T ss_pred HHHHHHHHHHhCCCEEEecCcccCCCCCChhhhHHHH-----------------HHHHHHHHHhCCEEEE
Confidence 4567778888999999998 55332 1111 2678899999998753
No 104
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=28.22 E-value=21 Score=38.16 Aligned_cols=60 Identities=15% Similarity=0.261 Sum_probs=40.9
Q ss_pred ceEEceeeeCCCCCCCCCHHHHHHHHHHcCCcEEEEecCCC------CCCHHHHHHHHHhCCCeEEEEE
Q 012987 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT------MSGIPEAIETARRFGMKIIPGV 134 (452)
Q Consensus 72 ~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt------~~g~~~~~~~a~~~gi~vI~Gi 134 (452)
+-++|.|+|... +..+|+++.+.|...|+..+.. |.++ ..++..+.+.++..++.+++.+
T Consensus 89 PG~ID~H~Hl~~--~~~~~~~~~~~al~~GvTtvv~-~p~~~~~v~g~~~~~~~l~~a~~~~~~v~~~~ 154 (608)
T 3nqb_A 89 PGLIDTHMHIES--SMITPAAYAAAVVARGVTTIVW-DPHEFGNVHGVDGVRWAAKAIENLPLRAILLA 154 (608)
T ss_dssp ECEEEEEECGGG--GTSCHHHHHHHHHTTTEEEEEE-CCHHHHHHHTHHHHHHHHHHHTTCSSEEEEEE
T ss_pred cCeEecccCccc--ccCCHHHHHHHHHhCCeEEEEc-CCccccccCCHHHHHHHHHHhhhcCcEEEEec
Confidence 347999999854 4568999999999999987764 3332 2234445555666677666544
No 105
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=28.22 E-value=81 Score=27.95 Aligned_cols=41 Identities=22% Similarity=0.344 Sum_probs=31.3
Q ss_pred CCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeEEEEE
Q 012987 88 LSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGV 134 (452)
Q Consensus 88 ~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI~Gi 134 (452)
.++++ ++.|.+.|.++| +..... .++.+.+++.|+++++|+
T Consensus 71 ~~~~~-~~~a~~~Gad~i-v~~~~~----~~~~~~~~~~g~~vi~g~ 111 (205)
T 1wa3_A 71 TSVEQ-CRKAVESGAEFI-VSPHLD----EEISQFCKEKGVFYMPGV 111 (205)
T ss_dssp CSHHH-HHHHHHHTCSEE-ECSSCC----HHHHHHHHHHTCEEECEE
T ss_pred CCHHH-HHHHHHcCCCEE-EcCCCC----HHHHHHHHHcCCcEECCc
Confidence 36665 588889999999 654322 567788888999999965
No 106
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=27.82 E-value=97 Score=31.02 Aligned_cols=62 Identities=13% Similarity=0.242 Sum_probs=39.8
Q ss_pred ceEEceeeeCCCC--CC---------------------CCCHHHH-------HHHHHHcCCcEEEEecCCCCCCHHHHHH
Q 012987 72 NVVFELHSHSNFS--DG---------------------YLSPSKL-------VERAHCNGVKVLALTDHDTMSGIPEAIE 121 (452)
Q Consensus 72 ~~~vDLH~HT~~S--DG---------------------~~sp~el-------v~~A~~~Gl~~iaITDHdt~~g~~~~~~ 121 (452)
+=+||.|+|...+ .| ..+++++ +..+.+.|+..+. |+. .....+.+
T Consensus 73 PGlID~H~Hl~~~~~~g~~~~~~l~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~--d~~--~~~~~~~~ 148 (472)
T 4dzh_A 73 PGLVNAHTHNPMTLLRGVADDLPLMVWLQQHIWPVEAAVIGPEFVADGTTLAIAEMLRGGTTCVN--ENY--FFADVQAA 148 (472)
T ss_dssp ECEEEEEECGGGGGGTTSSCSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEE--EEC--SCHHHHHH
T ss_pred ECccccccChhhHHhccccCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEE--Ecc--cCHHHHHH
Confidence 3489999999764 22 1444443 3347788977665 554 23455667
Q ss_pred HHHhCCCeEEEEEEEE
Q 012987 122 TARRFGMKIIPGVEIS 137 (452)
Q Consensus 122 ~a~~~gi~vI~GiEis 137 (452)
.+.+.|+..+.+..+.
T Consensus 149 a~~~~g~r~~~~~~~~ 164 (472)
T 4dzh_A 149 VYKQHGFRALVGAVII 164 (472)
T ss_dssp HHHHTTCEEEEEEEEC
T ss_pred HHHHhCCeEEEEeccc
Confidence 7778899888776654
No 107
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=27.78 E-value=2.5e+02 Score=25.82 Aligned_cols=48 Identities=13% Similarity=0.066 Sum_probs=36.4
Q ss_pred CCHHHHHHHHHHcCCEEEEeCCCCCCCcHHHHHHHHHcCCcEEEEeCCC
Q 012987 251 PLAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSD 299 (452)
Q Consensus 251 ~~~eeaI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GldGIEV~~~~ 299 (452)
.+..++++.+...+=++|+-... .....++++.+.+.|++-||+-...
T Consensus 5 ~~~~~~~~~l~~~~ii~vir~~~-~~~~~~~~~al~~gGv~~iel~~k~ 52 (224)
T 1vhc_A 5 YTTQQIIEKLRELKIVPVIALDN-ADDILPLADTLAKNGLSVAEITFRS 52 (224)
T ss_dssp CCHHHHHHHHHHHCEEEEECCSS-GGGHHHHHHHHHHTTCCEEEEETTS
T ss_pred cchHHHHHHHHHCCeEEEEeCCC-HHHHHHHHHHHHHcCCCEEEEeccC
Confidence 46678899999999999986532 2223467788889999999998543
No 108
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=27.69 E-value=1.2e+02 Score=27.33 Aligned_cols=45 Identities=9% Similarity=0.039 Sum_probs=35.6
Q ss_pred CCCHHHHHHHHHHcCCcEEEEe-cCC-----CCCCHHHHHHHHHhCCCeEE
Q 012987 87 YLSPSKLVERAHCNGVKVLALT-DHD-----TMSGIPEAIETARRFGMKII 131 (452)
Q Consensus 87 ~~sp~elv~~A~~~Gl~~iaIT-DHd-----t~~g~~~~~~~a~~~gi~vI 131 (452)
..++++.++.+++.|++.|-+. -.. +-....++.+.+++.||.+.
T Consensus 13 ~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~ 63 (278)
T 1i60_A 13 NSNLKLDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPL 63 (278)
T ss_dssp TCCHHHHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEE
T ss_pred CCCHHHHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCee
Confidence 4789999999999999999998 332 22456778888888998764
No 109
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=27.08 E-value=1.2e+02 Score=27.61 Aligned_cols=61 Identities=13% Similarity=0.156 Sum_probs=43.4
Q ss_pred CCHHHHHHHHHHcCCEEEEeCCCCC---CCcHHHHHHHHHcCCcEEEEeCCCCChhhhhhhhhhhhHHHHHhhHHHHHHH
Q 012987 251 PLAEVAVQLIHRTGGLAVLAHPWAL---KNPAAIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTD 327 (452)
Q Consensus 251 ~~~eeaI~~I~~aGGvaVLAHP~~~---~~~~~li~~l~~~GldGIEV~~~~~~~~~~~~l~~~~n~~~l~~~~~~~~~~ 327 (452)
.++.++++.++++ |.+|+-||... .....-+..|...+.|||=--.+ ....
T Consensus 43 ~~L~~iv~~ik~~-gK~vivh~DlI~GLs~d~~ai~fL~~~~pdGIIsTk~-------------------------~~i~ 96 (188)
T 1vkf_A 43 LNLKFHLKILKDR-GKTVFVDMDFVNGLGEGEEAILFVKKAGADGIITIKP-------------------------KNYV 96 (188)
T ss_dssp TTHHHHHHHHHHT-TCEEEEEGGGEETCCSSHHHHHHHHHHTCSEEEESCH-------------------------HHHH
T ss_pred HHHHHHHHHHHHC-CCeEEEecCcccccCCCHHHHHHHHhcCCCEEEcCcH-------------------------HHHH
Confidence 4689999999999 89999999643 33444555565568888643321 4677
Q ss_pred HHHHcCCeee
Q 012987 328 LADTYGLLKL 337 (452)
Q Consensus 328 lA~~~gLl~t 337 (452)
.|+++||...
T Consensus 97 ~Akk~GL~tI 106 (188)
T 1vkf_A 97 VAKKNGIPAV 106 (188)
T ss_dssp HHHHTTCCEE
T ss_pred HHHHcCCEEe
Confidence 7888887654
No 110
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=27.01 E-value=72 Score=31.97 Aligned_cols=23 Identities=26% Similarity=0.187 Sum_probs=16.5
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012987 252 LAEVAVQLIHRTGGLAV--LAHPWA 274 (452)
Q Consensus 252 ~~eeaI~~I~~aGGvaV--LAHP~~ 274 (452)
....+++.||+.|+.++ |.|+++
T Consensus 86 ~~k~l~~avh~~G~~i~~QL~H~Gr 110 (377)
T 2r14_A 86 GWKGVVEAVHAKGGRIALQLWHVGR 110 (377)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCTT
T ss_pred HHHHHHHHHhhcCCeEEEEccCCcc
Confidence 34677888999998655 778544
No 111
>1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A*
Probab=26.99 E-value=1.3e+02 Score=31.60 Aligned_cols=60 Identities=22% Similarity=0.348 Sum_probs=40.2
Q ss_pred HHHHHHHHcCCcEEEEe--C-------C-CCChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeeeccCCCCCCCCC
Q 012987 280 AIIRKLKDVGLHGLEVY--R-------S-DGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGGSDYHGRGGHG 349 (452)
Q Consensus 280 ~li~~l~~~GldGIEV~--~-------~-~~~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgGSDfHg~~~~~ 349 (452)
.-+..|+.+|+|||+|- . | ..+..-- ..+.+++++.||-+-.==-||..+.
T Consensus 37 ~~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsgY-----------------~~l~~mv~~~GLKlq~vmSFHqCGg-- 97 (495)
T 1wdp_A 37 EQLLQLRAAGVDGVMVDVWWGIIELKGPKQYDWRAY-----------------RSLLQLVQECGLTLQAIMSFHQCGG-- 97 (495)
T ss_dssp HHHHHHHHTTCCEEEEEEEHHHHTCSSTTCCCCHHH-----------------HHHHHHHHHTTCEEEEEEECSCBCC--
T ss_pred HHHHHHHHcCCCEEEEEeEeeeeccCCCCccCcHHH-----------------HHHHHHHHHcCCeEEEEEEeeecCC--
Confidence 45778999999999982 1 1 1122211 1678999999998877777998753
Q ss_pred CccCCC-cc--CCh
Q 012987 350 ESELGS-VK--LPV 360 (452)
Q Consensus 350 ~~~lG~-~~--~p~ 360 (452)
.+|. |. +|.
T Consensus 98 --NVGD~~~IPLP~ 109 (495)
T 1wdp_A 98 --NVGDIVNIPIPQ 109 (495)
T ss_dssp --STTCSCCBCSCH
T ss_pred --CCCCcccccCCH
Confidence 4664 44 454
No 112
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=26.74 E-value=43 Score=31.27 Aligned_cols=35 Identities=14% Similarity=0.135 Sum_probs=21.5
Q ss_pred eEEceeeeCCCCC------------------CCCCHHHHHHHHHHcCCcEEEE
Q 012987 73 VVFELHSHSNFSD------------------GYLSPSKLVERAHCNGVKVLAL 107 (452)
Q Consensus 73 ~~vDLH~HT~~SD------------------G~~sp~elv~~A~~~Gl~~iaI 107 (452)
+.||.|+|-...+ ...+++++++.+.+.|++...+
T Consensus 2 ~~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~ 54 (307)
T 2f6k_A 2 SKIDFHTHYLPTSYVEALKRHVPGDPDGWPTPEWTPQLTLNFMRDNDISYSIL 54 (307)
T ss_dssp CEEEEEEECCCHHHHHHHHHHCCSSGGGSCCCCCCHHHHHHHHHHTTEEEEEE
T ss_pred CeEEEecCcCCHHHHHHHHHhccCCcccCcCCCCCHHHHHHHHHHcCCCEEEE
Confidence 4799999964321 1245666666666666665444
No 113
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=26.33 E-value=67 Score=31.88 Aligned_cols=47 Identities=19% Similarity=0.278 Sum_probs=31.8
Q ss_pred cHHHHHHHHHcCCcEEEEe----CCCCC-----hhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeee-eccC
Q 012987 278 PAAIIRKLKDVGLHGLEVY----RSDGK-----LVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKL-GGSD 341 (452)
Q Consensus 278 ~~~li~~l~~~GldGIEV~----~~~~~-----~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~t-gGSD 341 (452)
..+.++.+++.|++|||+. .+... ..+. ..+.++++++||-++ ..+.
T Consensus 35 ~~e~l~~aa~~G~~~VEl~~~~l~p~~~~~~~~~~~~-----------------~~l~~~l~~~GL~i~~~~~~ 91 (393)
T 1xim_A 35 PVEAVHKLAEIGAYGITFHDDDLVPFGSDAQTRDGII-----------------AGFKKALDETGLIVPMVTTN 91 (393)
T ss_dssp HHHHHHHHHHHTCSEEECBHHHHSCTTCCHHHHHHHH-----------------HHHHHHHHHHTCBCCEEECC
T ss_pred HHHHHHHHHHhCCCEEEeecccCCCccccccccHHHH-----------------HHHHHHHHHhCCEEEEEecC
Confidence 4566777888899999997 55432 1111 267889999999774 4443
No 114
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=26.24 E-value=63 Score=35.03 Aligned_cols=23 Identities=26% Similarity=0.141 Sum_probs=17.4
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012987 252 LAEVAVQLIHRTGGLAV--LAHPWA 274 (452)
Q Consensus 252 ~~eeaI~~I~~aGGvaV--LAHP~~ 274 (452)
....+++.||+.|+.++ |.|+++
T Consensus 85 ~~~~~~~~vh~~g~~i~~Ql~h~Gr 109 (729)
T 1o94_A 85 NLKAMTDEVHKYGALAGVELWYGGA 109 (729)
T ss_dssp HHHHHHHHHHTTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHhCCCeEEEEecCCCc
Confidence 35678889999999765 889643
No 115
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=25.69 E-value=83 Score=28.86 Aligned_cols=45 Identities=11% Similarity=0.146 Sum_probs=34.6
Q ss_pred CCHHHHHHHHHHcCCcEEEEecCCCCC----CHHHHHHHHHhCCCeEEE
Q 012987 88 LSPSKLVERAHCNGVKVLALTDHDTMS----GIPEAIETARRFGMKIIP 132 (452)
Q Consensus 88 ~sp~elv~~A~~~Gl~~iaITDHdt~~----g~~~~~~~a~~~gi~vI~ 132 (452)
.++++.++.+++.|++.|-|.-.+... ...++.+.+++.||.+..
T Consensus 17 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~ 65 (290)
T 2qul_A 17 VDFPATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMC 65 (290)
T ss_dssp CCHHHHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEE
T ss_pred ccHHHHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEE
Confidence 589999999999999999998654322 345666777788988754
No 116
>2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A*
Probab=25.58 E-value=1.4e+02 Score=31.59 Aligned_cols=60 Identities=27% Similarity=0.386 Sum_probs=40.1
Q ss_pred HHHHHHHHcCCcEEEEe--C-------C-CCChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeeeccCCCCCCCCC
Q 012987 280 AIIRKLKDVGLHGLEVY--R-------S-DGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGGSDYHGRGGHG 349 (452)
Q Consensus 280 ~li~~l~~~GldGIEV~--~-------~-~~~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgGSDfHg~~~~~ 349 (452)
.-+..|+.+|+|||+|- . | ..+..-- ..+.+++++.||-+-.==-||..+.
T Consensus 35 a~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsgY-----------------~~L~~mvr~~GLKlq~vmSFHqCGg-- 95 (535)
T 2xfr_A 35 AQLRKLVEAGVDGVMVDVWWGLVEGKGPKAYDWSAY-----------------KQLFELVQKAGLKLQAIMSFHQCGG-- 95 (535)
T ss_dssp HHHHHHHHTTCCEEEEEEEHHHHTCSSTTCCCCHHH-----------------HHHHHHHHHTTCEEEEEEECSCBCC--
T ss_pred HHHHHHHHcCCCEEEEEeEeeeeccCCCCccCcHHH-----------------HHHHHHHHHcCCeEEEEEEeeecCC--
Confidence 45778999999999982 1 1 1122211 1678999999998877777998753
Q ss_pred CccCCC-cc--CCh
Q 012987 350 ESELGS-VK--LPV 360 (452)
Q Consensus 350 ~~~lG~-~~--~p~ 360 (452)
.+|. |. +|.
T Consensus 96 --NVGD~~~IPLP~ 107 (535)
T 2xfr_A 96 --NVGDAVNIPIPQ 107 (535)
T ss_dssp --STTCSCCBCSCH
T ss_pred --CCCCcccccCCH
Confidence 4664 44 454
No 117
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=25.54 E-value=1e+02 Score=26.80 Aligned_cols=49 Identities=14% Similarity=0.233 Sum_probs=34.2
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEecCCCCC--CHHHHHHHHHhCC---CeEEEE
Q 012987 85 DGYLSPSKLVERAHCNGVKVLALTDHDTMS--GIPEAIETARRFG---MKIIPG 133 (452)
Q Consensus 85 DG~~sp~elv~~A~~~Gl~~iaITDHdt~~--g~~~~~~~a~~~g---i~vI~G 133 (452)
....+|+++++.|++.+.+.|+++=-++.. ...+..+..++.| ++++.|
T Consensus 53 G~~~p~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vG 106 (161)
T 2yxb_A 53 GLRQTPEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLG 106 (161)
T ss_dssp CSBCCHHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEE
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 445899999999999999999998665432 2344444444443 666665
No 118
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=25.38 E-value=68 Score=29.80 Aligned_cols=46 Identities=9% Similarity=0.043 Sum_probs=34.3
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEecCCC----------CCCHHHHHHHHHhCCCeEE
Q 012987 86 GYLSPSKLVERAHCNGVKVLALTDHDT----------MSGIPEAIETARRFGMKII 131 (452)
Q Consensus 86 G~~sp~elv~~A~~~Gl~~iaITDHdt----------~~g~~~~~~~a~~~gi~vI 131 (452)
+..++++.++.+++.|++.|-|.-... .....++.+.+++.||.+.
T Consensus 28 ~~~~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 83 (295)
T 3cqj_A 28 AGECWLERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVP 83 (295)
T ss_dssp CCSCHHHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEE
T ss_pred CCCCHHHHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEE
Confidence 458999999999999999999975432 1123456677778898753
No 119
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=25.27 E-value=62 Score=31.50 Aligned_cols=60 Identities=17% Similarity=0.144 Sum_probs=37.7
Q ss_pred eEEceeeeCCCC--CCCCCHHHHHHHHHHcCCcEEEEecC-CCC-C---CHHHHHHHHHhCC-CeEEE
Q 012987 73 VVFELHSHSNFS--DGYLSPSKLVERAHCNGVKVLALTDH-DTM-S---GIPEAIETARRFG-MKIIP 132 (452)
Q Consensus 73 ~~vDLH~HT~~S--DG~~sp~elv~~A~~~Gl~~iaITDH-dt~-~---g~~~~~~~a~~~g-i~vI~ 132 (452)
=+||.|+|...+ +-...+....+.+.+.|+..+..+=. +.. . .+..+.+.++..+ +.+++
T Consensus 50 G~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (426)
T 2z00_A 50 GFLDLHAHLREPGEEVKEDLFSGLLAAVRGGYTDLVSMPNTKPPVDTPEAVRALKEKAKALGLARLHP 117 (426)
T ss_dssp CEEEEEECCCTTTCTTTCCHHHHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHTSSEECC
T ss_pred CEEEeccccCCCCCCchHHHHHHHHHHHhCCccEEEecCCCCCCcChHHHHHHHHHHhcccCcccEEE
Confidence 379999998764 12345778889999999988766432 111 1 2344455555666 66543
No 120
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=24.65 E-value=37 Score=30.49 Aligned_cols=25 Identities=16% Similarity=-0.118 Sum_probs=21.4
Q ss_pred CCCCC-HHHHHHHHHHcCCcEEEEec
Q 012987 85 DGYLS-PSKLVERAHCNGVKVLALTD 109 (452)
Q Consensus 85 DG~~s-p~elv~~A~~~Gl~~iaITD 109 (452)
.|.-. |-+++..|+++|++.||||-
T Consensus 87 Sg~n~~~ie~A~~ake~G~~vIaITs 112 (170)
T 3jx9_A 87 DTERSDLLASLARYDAWHTPYSIITL 112 (170)
T ss_dssp CSCCHHHHHHHHHHHHHTCCEEEEES
T ss_pred CCCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 34444 78999999999999999998
No 121
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=24.49 E-value=62 Score=34.56 Aligned_cols=23 Identities=17% Similarity=0.312 Sum_probs=17.6
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012987 252 LAEVAVQLIHRTGGLAV--LAHPWA 274 (452)
Q Consensus 252 ~~eeaI~~I~~aGGvaV--LAHP~~ 274 (452)
....+++.||+.|+.++ |.|+++
T Consensus 82 ~~~~~~~~vh~~g~~i~~Ql~h~Gr 106 (671)
T 1ps9_A 82 HHRTITEAVHQEGGKIALQILHTGR 106 (671)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCGG
T ss_pred HHHHHHHHHHhcCCEEEEEeccCCc
Confidence 45778889999999755 888654
No 122
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=24.41 E-value=1.1e+02 Score=28.31 Aligned_cols=58 Identities=21% Similarity=0.359 Sum_probs=42.8
Q ss_pred ceEEceeeeCCCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeEEEEEEEEe
Q 012987 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEIST 138 (452)
Q Consensus 72 ~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI~GiEis~ 138 (452)
...+|.|++. .+|+.+++.+.+.|.+.|.+-- .......+..+.+++.|+++ |+.+..
T Consensus 64 ~~~~dvhLmv------~~p~~~i~~~~~aGad~itvH~-Ea~~~~~~~i~~i~~~G~k~--gval~p 121 (228)
T 3ovp_A 64 DPFFDMHMMV------SKPEQWVKPMAVAGANQYTFHL-EATENPGALIKDIRENGMKV--GLAIKP 121 (228)
T ss_dssp SSCEEEEEEC------SCGGGGHHHHHHHTCSEEEEEG-GGCSCHHHHHHHHHHTTCEE--EEEECT
T ss_pred CCcEEEEEEe------CCHHHHHHHHHHcCCCEEEEcc-CCchhHHHHHHHHHHcCCCE--EEEEcC
Confidence 4678999996 6778899999999999999932 12234566777778888874 666653
No 123
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=24.37 E-value=81 Score=28.70 Aligned_cols=59 Identities=7% Similarity=0.013 Sum_probs=40.4
Q ss_pred CCceEEceeeeCCCCCCCCCHHHHHHHHHHcCCcEEEEecCCC---CC--CHHHHHHHHHhCCCeEE
Q 012987 70 DNNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT---MS--GIPEAIETARRFGMKII 131 (452)
Q Consensus 70 ~~~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt---~~--g~~~~~~~a~~~gi~vI 131 (452)
...|++=+++.|.. ..++++.++.+++.|++.|-+....- .. ...++.+.+++.||.+.
T Consensus 15 ~~~~klg~~~~~~~---~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 78 (257)
T 3lmz_A 15 VNPFHLGMAGYTFV---NFDLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGY 78 (257)
T ss_dssp CCSSEEEECGGGGT---TSCHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEE
T ss_pred CCceEEEEEEEeec---CCCHHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 33455555444432 36999999999999999999986521 11 13466777788998765
No 124
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A*
Probab=24.26 E-value=1e+02 Score=30.36 Aligned_cols=46 Identities=15% Similarity=0.268 Sum_probs=39.5
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeEEEEEE
Q 012987 85 DGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVE 135 (452)
Q Consensus 85 DG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI~GiE 135 (452)
|-.-+|+++++..+..|++.|=|-|-| ..+..+++..||+++.|+-
T Consensus 11 ~nlp~p~~vv~llks~gi~~VRlYdaD-----~~vL~Al~~sgi~v~vGV~ 56 (316)
T 3em5_A 11 NNLPPVSEVIALYKKSNITRMRIYDPN-----QAVLEALRGSNIELILGVP 56 (316)
T ss_dssp TTCCCHHHHHHHHHHTTCCEEECSSCC-----HHHHHHHTTCCCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEecCC-----HHHHHHhhcCCceEEEecc
Confidence 445689999999999999999998876 4577788889999999996
No 125
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=24.19 E-value=59 Score=29.82 Aligned_cols=16 Identities=19% Similarity=0.262 Sum_probs=8.0
Q ss_pred HHHHHHHcCCcEEEEe
Q 012987 281 IIRKLKDVGLHGLEVY 296 (452)
Q Consensus 281 li~~l~~~GldGIEV~ 296 (452)
.++.+++.|++|||++
T Consensus 28 ~l~~a~~~G~~~vEl~ 43 (264)
T 1yx1_A 28 FLPLLAMAGAQRVELR 43 (264)
T ss_dssp GHHHHHHHTCSEEEEE
T ss_pred HHHHHHHcCCCEEEEE
Confidence 3444445555555554
No 126
>2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A*
Probab=23.44 E-value=80 Score=32.51 Aligned_cols=52 Identities=15% Similarity=0.147 Sum_probs=39.2
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEe---------------cCCCCC------CHHHHHHHHHhCCCeEEEEEEEEe
Q 012987 85 DGYLSPSKLVERAHCNGVKVLALT---------------DHDTMS------GIPEAIETARRFGMKIIPGVEIST 138 (452)
Q Consensus 85 DG~~sp~elv~~A~~~Gl~~iaIT---------------DHdt~~------g~~~~~~~a~~~gi~vI~GiEis~ 138 (452)
--.+.|++.++.|++.|++.+.+| ||+.+. -+.++.++|++.||++ |+=+|.
T Consensus 75 p~~fDp~~Wa~~~k~AGakyvvlTaKHHDGF~lwpSk~t~~n~~~~~~krDlv~el~~A~rk~Glk~--GlY~S~ 147 (450)
T 2wvv_A 75 PTKFDAKKWAKMAKEMGTKYVKITTKHHEGFCLWPSKYTKYTVANTPYKRDILGELVKAYNDEGIDV--HFYFSV 147 (450)
T ss_dssp CTTCCHHHHHHHHHHHTCSEEEEEEECTTCCBSSCCTTCSCBGGGSTTCSCHHHHHHHHHHHTTCEE--EEEEES
T ss_pred cccCCHHHHHHHHHHcCCcEEEEEEeecCCccccCCCCCCCccccCCCCCChHHHHHHHHHHcCCeE--EEEecH
Confidence 346899999999999999999987 444331 1467888999999776 555554
No 127
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=23.41 E-value=37 Score=31.09 Aligned_cols=56 Identities=16% Similarity=0.071 Sum_probs=39.2
Q ss_pred eEEceeeeCCCCCCCCCHHHHHHHHHHcCCcEEEEecCCC-----CCCHHHHHHHHHhCCCeEE
Q 012987 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT-----MSGIPEAIETARRFGMKII 131 (452)
Q Consensus 73 ~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt-----~~g~~~~~~~a~~~gi~vI 131 (452)
|++-++. +.+ ..+++++.++.+++.|++.|-+.-.+. -....++.+.+++.|+.+.
T Consensus 4 Mk~~~~~-~~~--~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~~~ 64 (281)
T 3u0h_A 4 MEPCLHP-TLV--DETSLVLYLDLARETGYRYVDVPFHWLEAEAERHGDAAVEAMFQRRGLVLA 64 (281)
T ss_dssp CEEEECG-GGT--TCCCHHHHHHHHHHTTCSEECCCHHHHHHHHHHHCHHHHHHHHHTTTCEEC
T ss_pred chhhhcc-hhc--cCCCHHHHHHHHHHcCCCEEEecHHHHHHHhcccCHHHHHHHHHHcCCceE
Confidence 4554544 233 347999999999999999998875431 1235667777788898763
No 128
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=23.39 E-value=77 Score=30.70 Aligned_cols=43 Identities=14% Similarity=0.123 Sum_probs=34.0
Q ss_pred CCHHHHHHHHHHcCCEEEEeCCCCCCCcHHHHHHHHHcCCcEEEEe
Q 012987 251 PLAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVY 296 (452)
Q Consensus 251 ~~~eeaI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GldGIEV~ 296 (452)
|...++++.|++.+|++++-|... ...+++.+.+.|+|++-+-
T Consensus 217 p~~k~i~~~i~~~~g~~~i~~~~g---~~~~l~~l~~~g~d~~~~d 259 (338)
T 2eja_A 217 PYVNYLISELKDFSDTPVIYFFRG---SSSFIDLAVDYRADALSVD 259 (338)
T ss_dssp HHHHHHHHHHHHHCCCCEEEEESS---HHHHHHHHTTSCCSEEECC
T ss_pred HHHHHHHHHHhhcCCCCEEEEcCC---cHHHHHHHHHcCCCEEEeC
Confidence 556889999998867889989743 2568888999999988763
No 129
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=23.07 E-value=1.2e+02 Score=30.72 Aligned_cols=55 Identities=15% Similarity=0.334 Sum_probs=35.5
Q ss_pred HhhcCCCccccCCCCCHHHHHHHHHHc------CCEEEEeCCCCCCCcHHHHHHHHHcCCcEEEE
Q 012987 237 YLYDGGPAYSTGSEPLAEVAVQLIHRT------GGLAVLAHPWALKNPAAIIRKLKDVGLHGLEV 295 (452)
Q Consensus 237 yL~~g~p~yv~~~~~~~eeaI~~I~~a------GGvaVLAHP~~~~~~~~li~~l~~~GldGIEV 295 (452)
|++.|.|.+.+. ..+.++++.|++. -.+.+-++|... .++.++.|++.|++-|++
T Consensus 109 ~fgGGtpt~l~~--~~l~~ll~~i~~~~~~~~~~eitie~~p~~l--~~e~l~~L~~~G~~risl 169 (457)
T 1olt_A 109 HWGGGTPTYLNK--AQISRLMKLLRENFQFNADAEISIEVDPREI--ELDVLDHLRAEGFNRLSM 169 (457)
T ss_dssp EEEESCGGGSCH--HHHHHHHHHHHHHSCEEEEEEEEEEECSSSC--CTHHHHHHHHTTCCEEEE
T ss_pred EEeCCCcccCCH--HHHHHHHHHHHHhCCCCCCcEEEEEEccCcC--CHHHHHHHHHcCCCEEEE
Confidence 455555544321 2356777777762 257788899754 346788889999886665
No 130
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=23.04 E-value=95 Score=29.58 Aligned_cols=79 Identities=14% Similarity=0.159 Sum_probs=0.0
Q ss_pred ccHHHHHHHHhhcCCCccccCCCCCHHHHHHHHHHcCC-----EEEEeCCCCCCCcHHHHHHHHHcCCcEEEEeCCCCCh
Q 012987 228 ENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGG-----LAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKL 302 (452)
Q Consensus 228 ~~~~~af~~yL~~g~p~yv~~~~~~~eeaI~~I~~aGG-----vaVLAHP~~~~~~~~li~~l~~~GldGIEV~~~~~~~ 302 (452)
..++.|-.+-|..| .+++++++++++.-. +.....|......+..++++++.|+|| +.=++-+.
T Consensus 59 pvIq~a~~rAL~~g---------~~~~~~~~~~~~~r~~~Pivlm~Y~N~i~~~G~e~F~~~~~~aGvdG--~IipDLP~ 127 (252)
T 3tha_A 59 EIIADAAKIALDQG---------VDIHSVFELLARIKTKKALVFMVYYNLIFSYGLEKFVKKAKSLGICA--LIVPELSF 127 (252)
T ss_dssp CHHHHHHHHHHHTT---------CCHHHHHHHHHHCCCSSEEEEECCHHHHHHHCHHHHHHHHHHTTEEE--EECTTCCG
T ss_pred HHHHHHHHHHHHCC---------CCHHHHHHHHHHHhcCCCEEEEeccCHHHHhhHHHHHHHHHHcCCCE--EEeCCCCH
Q ss_pred hhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCC
Q 012987 303 VDVNFLEKIDNFLLLLCLRQITYTDLADTYGL 334 (452)
Q Consensus 303 ~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gL 334 (452)
++.+ .+.+.|+++||
T Consensus 128 eE~~-----------------~~~~~~~~~Gl 142 (252)
T 3tha_A 128 EESD-----------------DLIKECERYNI 142 (252)
T ss_dssp GGCH-----------------HHHHHHHHTTC
T ss_pred HHHH-----------------HHHHHHHHcCC
No 131
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=23.02 E-value=81 Score=29.64 Aligned_cols=45 Identities=20% Similarity=0.366 Sum_probs=34.2
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeEEEEEE
Q 012987 86 GYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVE 135 (452)
Q Consensus 86 G~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI~GiE 135 (452)
|+..-.+-++.|.+.|.++|.. .+ -.++..++|+++|+.++||+-
T Consensus 91 GTVlt~~~a~~Ai~AGA~fIvs-P~----~~~~vi~~~~~~gi~~ipGv~ 135 (232)
T 4e38_A 91 GTILNGEQALAAKEAGATFVVS-PG----FNPNTVRACQEIGIDIVPGVN 135 (232)
T ss_dssp ECCCSHHHHHHHHHHTCSEEEC-SS----CCHHHHHHHHHHTCEEECEEC
T ss_pred CCcCCHHHHHHHHHcCCCEEEe-CC----CCHHHHHHHHHcCCCEEcCCC
Confidence 3433477899999999999963 32 236677888889999999964
No 132
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=22.90 E-value=2.2e+02 Score=27.25 Aligned_cols=81 Identities=16% Similarity=0.169 Sum_probs=49.3
Q ss_pred CEEEEeCCCCCCCc--HHHHHHHHHcCCcEEEEeCCCC-ChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeeeccC
Q 012987 265 GLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG-KLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGGSD 341 (452)
Q Consensus 265 GvaVLAHP~~~~~~--~~li~~l~~~GldGIEV~~~~~-~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgGSD 341 (452)
.++|+||-+..... .++.+...+.|.||+=+..|++ .+.+.. ++ ..+.++|+.-++++.-
T Consensus 77 rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~----------l~----~~f~~va~a~~lPiil--- 139 (301)
T 3m5v_A 77 KVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAPYYNKPTQQG----------LY----EHYKAIAQSVDIPVLL--- 139 (301)
T ss_dssp SCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHH----------HH----HHHHHHHHHCSSCEEE---
T ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHH----------HH----HHHHHHHHhCCCCEEE---
Confidence 49999998764322 2455566789999999998764 333322 11 2678888887776652
Q ss_pred CCCCCCCCCccCCCccCChhHHHHHhc
Q 012987 342 YHGRGGHGESELGSVKLPVLVLNDFLK 368 (452)
Q Consensus 342 fHg~~~~~~~~lG~~~~p~~~~~~~~~ 368 (452)
||-|. ...+.++.+++.++.+
T Consensus 140 Yn~P~------~tg~~l~~~~~~~La~ 160 (301)
T 3m5v_A 140 YNVPG------RTGCEISTDTIIKLFR 160 (301)
T ss_dssp EECHH------HHSCCCCHHHHHHHHH
T ss_pred EeCch------hhCcCCCHHHHHHHHh
Confidence 33321 1124566666666654
No 133
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=22.39 E-value=91 Score=30.73 Aligned_cols=38 Identities=11% Similarity=0.043 Sum_probs=29.4
Q ss_pred eEEceeeeCCCC--CCCCCHHHHHHHHHHcCCcEEEEecC
Q 012987 73 VVFELHSHSNFS--DGYLSPSKLVERAHCNGVKVLALTDH 110 (452)
Q Consensus 73 ~~vDLH~HT~~S--DG~~sp~elv~~A~~~Gl~~iaITDH 110 (452)
=++|.|+|...+ ...-+.....+.|.+.|+..+..+-+
T Consensus 54 G~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~ 93 (428)
T 3mpg_A 54 GLVDVHVHLREPGGEHKETIETGTLAAAKGGFTTICAMPN 93 (428)
T ss_dssp CEEEEEECCCTTTCTTTCCHHHHHHHHHHHTEEEEEECSC
T ss_pred CEEEEeeccCCCCCCchhHHHHHHHHHHhCCeEEEEeCCC
Confidence 379999998654 23456778899999999998887654
No 134
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=21.99 E-value=89 Score=30.82 Aligned_cols=49 Identities=16% Similarity=0.289 Sum_probs=31.3
Q ss_pred cHHHHHHHHHcCCcEEEEeC----CCCC-hhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeeec
Q 012987 278 PAAIIRKLKDVGLHGLEVYR----SDGK-LVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGG 339 (452)
Q Consensus 278 ~~~li~~l~~~GldGIEV~~----~~~~-~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgG 339 (452)
+.+.++.+++.|++|||++. +... ..+.. .....+.++++++||-+++-
T Consensus 35 ~~e~l~~aa~~G~~~VEl~~~~~~p~~~~~~~~~-------------~~~~~l~~~l~~~GL~i~~~ 88 (386)
T 1muw_A 35 PVETVQRLAELGAHGVTFHDDDLIPFGSSDTERE-------------SHIKRFRQALDATGMTVPMA 88 (386)
T ss_dssp HHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHH-------------HHHHHHHHHHHHHTCBCCEE
T ss_pred HHHHHHHHHHcCCCEEEeeCCCCCcccCcccccH-------------HHHHHHHHHHHHhCCeEEEE
Confidence 45677788889999999985 2221 11000 01126788999999977653
No 135
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=21.94 E-value=1.3e+02 Score=28.49 Aligned_cols=41 Identities=15% Similarity=0.233 Sum_probs=18.6
Q ss_pred HHHHHHHHcC-CEEEEeCCCCCCCcHHHHHHHHHcCCcEEEEe
Q 012987 255 VAVQLIHRTG-GLAVLAHPWALKNPAAIIRKLKDVGLHGLEVY 296 (452)
Q Consensus 255 eaI~~I~~aG-GvaVLAHP~~~~~~~~li~~l~~~GldGIEV~ 296 (452)
++|+.|++.. -+++-+|-. ..+++..++.++++|.|.|-+.
T Consensus 75 ~~v~~lr~~~p~~~ldvHLm-v~~p~~~i~~~~~aGAd~itvH 116 (246)
T 3inp_A 75 MVLKALRDYGITAGMDVHLM-VKPVDALIESFAKAGATSIVFH 116 (246)
T ss_dssp HHHHHHHHHTCCSCEEEEEE-CSSCHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHhCCCCeEEEEEe-eCCHHHHHHHHHHcCCCEEEEc
Confidence 3444444444 444444432 2233444455555555555443
No 136
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=21.91 E-value=1.2e+02 Score=28.37 Aligned_cols=46 Identities=20% Similarity=0.148 Sum_probs=35.7
Q ss_pred CCCHHHHHHHHHHcCCcEEEEecCC------CCCCHHHHHHHHHhCCCeEEE
Q 012987 87 YLSPSKLVERAHCNGVKVLALTDHD------TMSGIPEAIETARRFGMKIIP 132 (452)
Q Consensus 87 ~~sp~elv~~A~~~Gl~~iaITDHd------t~~g~~~~~~~a~~~gi~vI~ 132 (452)
..++++.++.|++.|++.|-|.-.+ .-....++.+.+++.||.+..
T Consensus 35 ~~~~~~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 86 (296)
T 2g0w_A 35 EVSFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTE 86 (296)
T ss_dssp TSCHHHHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCEEEE
T ss_pred CCCHHHHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCceEe
Confidence 3899999999999999999997531 123456777888889988654
No 137
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=21.77 E-value=2.2e+02 Score=27.25 Aligned_cols=94 Identities=12% Similarity=0.045 Sum_probs=55.0
Q ss_pred CCHHHHHHHH---HH--cCCEEEEeCCCCCCCc--HHHHHHHHHcCCcEEEEeCCCCC-hhhhhhhhhhhhHHHHHhhHH
Q 012987 251 PLAEVAVQLI---HR--TGGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDGK-LVDVNFLEKIDNFLLLLCLRQ 322 (452)
Q Consensus 251 ~~~eeaI~~I---~~--aGGvaVLAHP~~~~~~--~~li~~l~~~GldGIEV~~~~~~-~~~~~~l~~~~n~~~l~~~~~ 322 (452)
++.+|=.+++ .+ .|.++|+||-+..... .++.+...+.|.||+=+..|++. +.+.. ++
T Consensus 57 Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~----------l~---- 122 (297)
T 3flu_A 57 LSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEG----------IY---- 122 (297)
T ss_dssp SCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHH----------HH----
T ss_pred CCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHH----------HH----
Confidence 4555533333 22 3668999998764322 24556667899999999887643 33322 11
Q ss_pred HHHHHHHHHcCCeeeeccCCCCCCCCCCccCCCccCChhHHHHHh
Q 012987 323 ITYTDLADTYGLLKLGGSDYHGRGGHGESELGSVKLPVLVLNDFL 367 (452)
Q Consensus 323 ~~~~~lA~~~gLl~tgGSDfHg~~~~~~~~lG~~~~p~~~~~~~~ 367 (452)
..|.++|+.-++++.- ||-|. ...+.++.+++.++.
T Consensus 123 ~~f~~va~a~~lPiil---Yn~P~------~tg~~l~~~~~~~La 158 (297)
T 3flu_A 123 QHFKTIAEATSIPMII---YNVPG------RTVVSMTNDTILRLA 158 (297)
T ss_dssp HHHHHHHHHCCSCEEE---EECHH------HHSSCCCHHHHHHHT
T ss_pred HHHHHHHHhCCCCEEE---EECCc------hhccCCCHHHHHHHH
Confidence 2678888887776653 33321 112445666666655
No 138
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=21.75 E-value=81 Score=31.74 Aligned_cols=41 Identities=22% Similarity=0.291 Sum_probs=25.0
Q ss_pred HHHHHHcCCcEEEEecCCCCC--CHHHHHHHHHhCCCeEEEEEEE
Q 012987 94 VERAHCNGVKVLALTDHDTMS--GIPEAIETARRFGMKIIPGVEI 136 (452)
Q Consensus 94 v~~A~~~Gl~~iaITDHdt~~--g~~~~~~~a~~~gi~vI~GiEi 136 (452)
+..+.+.|+..+.- +-+.. .+..+.+.+++.|++++.|..+
T Consensus 124 ~~~~l~~GvTtv~~--~~~~~~~~~~~~~~~~~~~g~r~~~g~~~ 166 (475)
T 2ood_A 124 LDALLAAGTTTCQA--FTSSSPVATEELFEEASRRNMRVIAGLTG 166 (475)
T ss_dssp HHHHHHTTEEEEEE--ECCSSHHHHHHHHHHHHHHTCCEEECCEE
T ss_pred HHHHHhcCceEEEE--ecccCchhHHHHHHHHHHcCCeEEEEeee
Confidence 67888999877664 32221 2344456666778877655443
No 139
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=21.71 E-value=1.1e+02 Score=28.21 Aligned_cols=45 Identities=9% Similarity=-0.028 Sum_probs=36.1
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeEEE
Q 012987 86 GYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIP 132 (452)
Q Consensus 86 G~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI~ 132 (452)
..+++++.++.+++.|++.|-+..... ...++.+.+++.||.+..
T Consensus 29 ~~~~~~~~l~~~~~~G~~~vEl~~~~~--~~~~~~~~l~~~gl~~~~ 73 (301)
T 3cny_A 29 KDNNLQQLLSDIVVAGFQGTEVGGFFP--GPEKLNYELKLRNLEIAG 73 (301)
T ss_dssp TTCCHHHHHHHHHHHTCCEECCCTTCC--CHHHHHHHHHHTTCEECE
T ss_pred cCCCHHHHHHHHHHhCCCEEEecCCCC--CHHHHHHHHHHCCCeEEE
Confidence 357899999999999999999984332 567777888889988654
No 140
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=21.68 E-value=1.7e+02 Score=28.02 Aligned_cols=83 Identities=12% Similarity=0.072 Sum_probs=48.8
Q ss_pred cCCEEEEeCCCCCCCc--HHHHHHHHHcCCcEEEEeCCCC-ChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeeec
Q 012987 263 TGGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG-KLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGG 339 (452)
Q Consensus 263 aGGvaVLAHP~~~~~~--~~li~~l~~~GldGIEV~~~~~-~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgG 339 (452)
.|.++|+||-+..... .++.+...+.|.||+=+..|++ .+.+.. ++ ..|.++|+.-++++.-
T Consensus 69 ~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~----------l~----~~f~~ia~a~~lPiil- 133 (292)
T 3daq_A 69 DKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNKTNQRG----------LV----KHFEAIADAVKLPVVL- 133 (292)
T ss_dssp TTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHH----------HH----HHHHHHHHHHCSCEEE-
T ss_pred CCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHH----------HH----HHHHHHHHhCCCCEEE-
Confidence 3668999987654322 2345556678999999987753 333222 11 2677888876776653
Q ss_pred cCCCCCCCCCCccCCCccCChhHHHHHhc
Q 012987 340 SDYHGRGGHGESELGSVKLPVLVLNDFLK 368 (452)
Q Consensus 340 SDfHg~~~~~~~~lG~~~~p~~~~~~~~~ 368 (452)
||-|. ...+.++.+++.++.+
T Consensus 134 --Yn~P~------~tg~~l~~~~~~~La~ 154 (292)
T 3daq_A 134 --YNVPS------RTNMTIEPETVEILSQ 154 (292)
T ss_dssp --EECHH------HHSCCCCHHHHHHHHT
T ss_pred --Eeccc------ccCCCCCHHHHHHHhc
Confidence 44331 1124566666666654
No 141
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=21.52 E-value=2e+02 Score=26.78 Aligned_cols=15 Identities=0% Similarity=-0.135 Sum_probs=12.0
Q ss_pred HHHHHHHHcCCeeee
Q 012987 324 TYTDLADTYGLLKLG 338 (452)
Q Consensus 324 ~~~~lA~~~gLl~tg 338 (452)
.+.++|.++|+.+.-
T Consensus 149 ~~~~~a~~~~lpv~i 163 (327)
T 2dvt_A 149 PFWGEVEKLDVPFYL 163 (327)
T ss_dssp HHHHHHHHHTCCEEE
T ss_pred HHHHHHHHcCCeEEE
Confidence 578889999998753
No 142
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=21.51 E-value=2.5e+02 Score=26.79 Aligned_cols=37 Identities=22% Similarity=0.179 Sum_probs=24.1
Q ss_pred CCEEEEeCCCCCCCc--HHHHHHHHHcCCcEEEEeCCCC
Q 012987 264 GGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG 300 (452)
Q Consensus 264 GGvaVLAHP~~~~~~--~~li~~l~~~GldGIEV~~~~~ 300 (452)
|.++|+|+-+..... .++.+...+.|.||+=+..|++
T Consensus 68 grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 106 (294)
T 2ehh_A 68 GRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVPYY 106 (294)
T ss_dssp TSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 458888887654322 2344555677888888877754
No 143
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=21.48 E-value=2.2e+02 Score=27.07 Aligned_cols=37 Identities=16% Similarity=0.056 Sum_probs=24.8
Q ss_pred CCEEEEeCCCCCCCc--HHHHHHHHHcCCcEEEEeCCCC
Q 012987 264 GGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG 300 (452)
Q Consensus 264 GGvaVLAHP~~~~~~--~~li~~l~~~GldGIEV~~~~~ 300 (452)
|.++|+|+-+..... .++.+...+.|.||+=+..|++
T Consensus 68 gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 106 (289)
T 2yxg_A 68 GRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYY 106 (289)
T ss_dssp TSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred CCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 458888887754322 2344555677999998887754
No 144
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=21.27 E-value=1.9e+02 Score=27.12 Aligned_cols=44 Identities=18% Similarity=0.191 Sum_probs=33.6
Q ss_pred CCCHHHHHHHHHHcCCcEEEEecC-CCCC---------CHHHHHHHHHhCCCeE
Q 012987 87 YLSPSKLVERAHCNGVKVLALTDH-DTMS---------GIPEAIETARRFGMKI 130 (452)
Q Consensus 87 ~~sp~elv~~A~~~Gl~~iaITDH-dt~~---------g~~~~~~~a~~~gi~v 130 (452)
..++++.++.+++.|++.|-|.-. ..+. ...++.+.+++.||.+
T Consensus 14 ~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i 67 (340)
T 2zds_A 14 DLPLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKC 67 (340)
T ss_dssp TSCHHHHHHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEE
T ss_pred CCCHHHHHHHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeE
Confidence 578999999999999999999853 1121 2456677788889876
No 145
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=21.18 E-value=2.5e+02 Score=26.99 Aligned_cols=81 Identities=12% Similarity=0.074 Sum_probs=49.2
Q ss_pred CCEEEEeCCCCCCCc--HHHHHHHHHcCCcEEEEeCCCCC-hhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeeecc
Q 012987 264 GGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDGK-LVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGGS 340 (452)
Q Consensus 264 GGvaVLAHP~~~~~~--~~li~~l~~~GldGIEV~~~~~~-~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgGS 340 (452)
|.++|+|+-+..... .++.+...+.|.||+=+..|++. +.+.. ++ ..|.++|+.-++++.-
T Consensus 84 grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~----------l~----~~f~~ia~a~~lPiil-- 147 (304)
T 3cpr_A 84 DRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTPYYSKPSQEG----------LL----AHFGAIAAATEVPICL-- 147 (304)
T ss_dssp TTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHH----------HH----HHHHHHHHHCCSCEEE--
T ss_pred CCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHH----------HH----HHHHHHHHhcCCCEEE--
Confidence 559999998765422 24455567789999999887652 33222 11 2677888877776543
Q ss_pred CCCCCCCCCCccCCCccCChhHHHHHh
Q 012987 341 DYHGRGGHGESELGSVKLPVLVLNDFL 367 (452)
Q Consensus 341 DfHg~~~~~~~~lG~~~~p~~~~~~~~ 367 (452)
||-|. .- .+.++.+++.++.
T Consensus 148 -Yn~P~-----~t-g~~l~~~~~~~La 167 (304)
T 3cpr_A 148 -YDIPG-----RS-GIPIESDTMRRLS 167 (304)
T ss_dssp -EECHH-----HH-SSCCCHHHHHHHT
T ss_pred -EeCcc-----cc-CcCCCHHHHHHHH
Confidence 33331 11 2456666666664
No 146
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=21.17 E-value=1.8e+02 Score=28.04 Aligned_cols=82 Identities=21% Similarity=0.178 Sum_probs=49.7
Q ss_pred cCCEEEEeCCCCCCCc--HHHHHHHHHcCCcEEEEeCCCC-ChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeeec
Q 012987 263 TGGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG-KLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGG 339 (452)
Q Consensus 263 aGGvaVLAHP~~~~~~--~~li~~l~~~GldGIEV~~~~~-~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgG 339 (452)
.|.++|+||-+..... .++.+...+.|.||+=+..|++ .+.+.. ++ ..|.++|+.-++++.-
T Consensus 82 ~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~----------l~----~~f~~va~a~~lPiil- 146 (304)
T 3l21_A 82 GDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPYYSKPPQRG----------LQ----AHFTAVADATELPMLL- 146 (304)
T ss_dssp TTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHH----------HH----HHHHHHHTSCSSCEEE-
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHH----------HH----HHHHHHHHhcCCCEEE-
Confidence 4669999998754322 2455666788999999998764 333222 11 2678888887776653
Q ss_pred cCCCCCCCCCCccCCCccCChhHHHHHh
Q 012987 340 SDYHGRGGHGESELGSVKLPVLVLNDFL 367 (452)
Q Consensus 340 SDfHg~~~~~~~~lG~~~~p~~~~~~~~ 367 (452)
||-|. . -.+.++.+++.++.
T Consensus 147 --Yn~P~-----~-tg~~l~~~~~~~La 166 (304)
T 3l21_A 147 --YDIPG-----R-SAVPIEPDTIRALA 166 (304)
T ss_dssp --EECHH-----H-HSSCCCHHHHHHHH
T ss_pred --EeCcc-----c-cCCCCCHHHHHHHh
Confidence 33321 1 12455666666665
No 147
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=21.01 E-value=1.7e+02 Score=28.48 Aligned_cols=83 Identities=11% Similarity=0.151 Sum_probs=47.7
Q ss_pred cCCEEEEeCCCCCCCc--HHHHHHHHHcCCcEEEEeCCCCC-hhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeeec
Q 012987 263 TGGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDGK-LVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGG 339 (452)
Q Consensus 263 aGGvaVLAHP~~~~~~--~~li~~l~~~GldGIEV~~~~~~-~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgG 339 (452)
.|.++|+|+-+..... .++.+...+.|.||+=+..|++. +.+.. ++ ..|.++|+.-++++.-
T Consensus 89 ~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~----------l~----~~f~~va~a~~lPiil- 153 (315)
T 3si9_A 89 AKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQRG----------LY----THFSSIAKAISIPIII- 153 (315)
T ss_dssp TTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHH----------HH----HHHHHHHHHCSSCEEE-
T ss_pred CCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHH----------HH----HHHHHHHHcCCCCEEE-
Confidence 3668999987754322 24455667789999999877643 33221 11 2677888776665543
Q ss_pred cCCCCCCCCCCccCCCccCChhHHHHHhc
Q 012987 340 SDYHGRGGHGESELGSVKLPVLVLNDFLK 368 (452)
Q Consensus 340 SDfHg~~~~~~~~lG~~~~p~~~~~~~~~ 368 (452)
||-|. .-.+.++.+++.++.+
T Consensus 154 --Yn~P~------~tg~~l~~~~~~~La~ 174 (315)
T 3si9_A 154 --YNIPS------RSVIDMAVETMRDLCR 174 (315)
T ss_dssp --EECHH------HHSCCCCHHHHHHHHH
T ss_pred --EeCch------hhCCCCCHHHHHHHHh
Confidence 33221 1124455666665543
No 148
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=20.84 E-value=1.4e+02 Score=28.86 Aligned_cols=40 Identities=23% Similarity=0.249 Sum_probs=25.8
Q ss_pred HHHHHHHHHHcCCEEEEeCCCCCCCcHHHHHHHHHcCCcEEE
Q 012987 253 AEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLE 294 (452)
Q Consensus 253 ~eeaI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GldGIE 294 (452)
+.++++.|++..|+.+-..|+. ...+.++.|+++|++.+-
T Consensus 128 ~~~l~~~ik~~~~i~i~~s~g~--~~~e~l~~L~~aG~~~i~ 167 (350)
T 3t7v_A 128 FVELVQIVKEELGLPIMISPGL--MDNATLLKAREKGANFLA 167 (350)
T ss_dssp HHHHHHHHHHHHCSCEEEECSS--CCHHHHHHHHHTTEEEEE
T ss_pred HHHHHHHHHhhcCceEEEeCCC--CCHHHHHHHHHcCCCEEE
Confidence 3567777775545666666653 234667778888877664
No 149
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=20.79 E-value=98 Score=30.66 Aligned_cols=49 Identities=14% Similarity=0.116 Sum_probs=31.4
Q ss_pred cHHHHHHHHHcCCcEEEEeCC----CCC-hhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeeec
Q 012987 278 PAAIIRKLKDVGLHGLEVYRS----DGK-LVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGG 339 (452)
Q Consensus 278 ~~~li~~l~~~GldGIEV~~~----~~~-~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgG 339 (452)
..+.++.+++.|++|||+... ... ..+.. .....+.++++++||-+++-
T Consensus 35 l~e~l~~aa~~G~d~VEl~~~~~~~~~~~~~~~~-------------~~~~~l~~~l~~~GL~i~~~ 88 (394)
T 1xla_A 35 PVEAVHKLAELGAYGITFHDNDLIPFDATEAERE-------------KILGDFNQALKDTGLKVPMV 88 (394)
T ss_dssp HHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHH-------------HHHHHHHHHHHHHCCBCCEE
T ss_pred HHHHHHHHHHcCCCEEEecCCccCcccCCchhhH-------------HHHHHHHHHHHHcCCeEEEE
Confidence 456788888999999999852 211 11000 01126788899999977643
No 150
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=20.76 E-value=1.7e+02 Score=26.31 Aligned_cols=53 Identities=9% Similarity=0.099 Sum_probs=36.7
Q ss_pred CceEEceeeeCCCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeE
Q 012987 71 NNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKI 130 (452)
Q Consensus 71 ~~~~vDLH~HT~~SDG~~sp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~v 130 (452)
..++.|+|.|. .|..+++.+.+.|.+.+.+----.......+.+.+++.|..+
T Consensus 57 ~~v~lD~kl~d-------ip~t~~~~~~~~Gad~itvh~~~g~~~l~~~~~~~~~~g~~~ 109 (216)
T 1q6o_A 57 KIVLADAKIAD-------AGKILSRMCFEANADWVTVICCADINTAKGALDVAKEFNGDV 109 (216)
T ss_dssp SEEEEEEEECS-------CHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHTTCEE
T ss_pred CeEEEEEEecc-------cHHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHcCCCc
Confidence 46889999984 488889999999999988832111111345666667777664
No 151
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=20.63 E-value=2.2e+02 Score=27.09 Aligned_cols=83 Identities=13% Similarity=0.109 Sum_probs=49.2
Q ss_pred cCCEEEEeCCCCCCCc--HHHHHHHHHcCCcEEEEeCCCC-ChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeeec
Q 012987 263 TGGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG-KLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGG 339 (452)
Q Consensus 263 aGGvaVLAHP~~~~~~--~~li~~l~~~GldGIEV~~~~~-~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgG 339 (452)
.|.++|+|+-+..... .++.+...+.|.||+=+..|++ .+.+.. ++ ..|.++|+.-++++.-
T Consensus 71 ~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~----------l~----~~f~~va~a~~lPiil- 135 (293)
T 1f6k_A 71 KDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPE----------IK----HYYDTIIAETGSNMIV- 135 (293)
T ss_dssp TTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHH----------HH----HHHHHHHHHHCCCEEE-
T ss_pred CCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHH----------HH----HHHHHHHHhCCCCEEE-
Confidence 3569999998765432 2345556678999999988764 233222 11 2677888876665542
Q ss_pred cCCCCCCCCCCccCCCccCChhHHHHHhc
Q 012987 340 SDYHGRGGHGESELGSVKLPVLVLNDFLK 368 (452)
Q Consensus 340 SDfHg~~~~~~~~lG~~~~p~~~~~~~~~ 368 (452)
||-|. ...+.++.+++.++.+
T Consensus 136 --Yn~P~------~tg~~l~~~~~~~La~ 156 (293)
T 1f6k_A 136 --YSIPF------LTGVNMGIEQFGELYK 156 (293)
T ss_dssp --EECHH------HHCCCCCHHHHHHHHT
T ss_pred --EECcc------ccCcCCCHHHHHHHhc
Confidence 33321 1124566666666653
No 152
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=20.48 E-value=2.5e+02 Score=27.18 Aligned_cols=95 Identities=17% Similarity=0.158 Sum_probs=55.1
Q ss_pred CCHHHHHHHHH----H-cCCEEEEeCCCCCCCc--HHHHHHHHHcCCcEEEEeCCCC-ChhhhhhhhhhhhHHHHHhhHH
Q 012987 251 PLAEVAVQLIH----R-TGGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG-KLVDVNFLEKIDNFLLLLCLRQ 322 (452)
Q Consensus 251 ~~~eeaI~~I~----~-aGGvaVLAHP~~~~~~--~~li~~l~~~GldGIEV~~~~~-~~~~~~~l~~~~n~~~l~~~~~ 322 (452)
++.+|-.++++ . .|.++|+|+-+..... .++.+...+.|.||+=+..|++ .+.+.. + .
T Consensus 73 Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~s~~~----------l----~ 138 (314)
T 3qze_A 73 LDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNKPTQEG----------M----Y 138 (314)
T ss_dssp CCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHH----------H----H
T ss_pred CCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHH----------H----H
Confidence 45555443332 2 3668999988764322 2455666789999999998754 333322 1 1
Q ss_pred HHHHHHHHHcCCeeeeccCCCCCCCCCCccCCCccCChhHHHHHhc
Q 012987 323 ITYTDLADTYGLLKLGGSDYHGRGGHGESELGSVKLPVLVLNDFLK 368 (452)
Q Consensus 323 ~~~~~lA~~~gLl~tgGSDfHg~~~~~~~~lG~~~~p~~~~~~~~~ 368 (452)
..|.++|+.-++++.- ||-|. .-.+.++.+++.++.+
T Consensus 139 ~~f~~va~a~~lPiil---Yn~P~------~tg~~l~~~~~~~La~ 175 (314)
T 3qze_A 139 QHFRHIAEAVAIPQIL---YNVPG------RTSCDMLPETVERLSK 175 (314)
T ss_dssp HHHHHHHHHSCSCEEE---EECHH------HHSCCCCHHHHHHHHT
T ss_pred HHHHHHHHhcCCCEEE---EeCcc------ccCCCCCHHHHHHHhc
Confidence 2678888887776653 33321 1124566666666653
No 153
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=20.46 E-value=1.1e+02 Score=25.93 Aligned_cols=38 Identities=29% Similarity=0.272 Sum_probs=29.3
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhCCCeEE
Q 012987 91 SKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKII 131 (452)
Q Consensus 91 ~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vI 131 (452)
.++++.+.+.|...+.++... ...++.+.+++.|+.++
T Consensus 91 ~~vv~~~~~~gi~~i~~~~g~---~~~~l~~~a~~~Gi~vv 128 (144)
T 2d59_A 91 MEYVEQAIKKGAKVVWFQYNT---YNREASKKADEAGLIIV 128 (144)
T ss_dssp HHHHHHHHHHTCSEEEECTTC---CCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHcCCCEEEECCCc---hHHHHHHHHHHcCCEEE
Confidence 457888899999998776432 25778888899999876
No 154
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=20.45 E-value=3.2e+02 Score=26.04 Aligned_cols=67 Identities=9% Similarity=0.055 Sum_probs=36.2
Q ss_pred HHHHHHHcCC--EEEEeCCCCC----CCcHHHHHHHH-HcCCcEEEEeCCCC-------ChhhhhhhhhhhhHHHHHhhH
Q 012987 256 AVQLIHRTGG--LAVLAHPWAL----KNPAAIIRKLK-DVGLHGLEVYRSDG-------KLVDVNFLEKIDNFLLLLCLR 321 (452)
Q Consensus 256 aI~~I~~aGG--vaVLAHP~~~----~~~~~li~~l~-~~GldGIEV~~~~~-------~~~~~~~l~~~~n~~~l~~~~ 321 (452)
+.++++...+ +++..||... ......++++. +.|+.|||+..... ...+.. +
T Consensus 96 ~~~~~~~~p~rf~~~~~~p~~~~~~~~~a~~eL~r~~~~~g~~Gv~l~~~~~~~~~~~~~l~d~~----------~---- 161 (350)
T 2gwg_A 96 CYRVSQLFPDNFIGAAMLPQSPGVDPKTCIPELEKCVKEYGFVAINLNPDPSGGHWTSPPLTDRI----------W---- 161 (350)
T ss_dssp HHHHHHHSTTTEEEEEECCCCTTSCGGGGHHHHHHHHHTSCCCEEEECSCTTSSCCCSCCTTSGG----------G----
T ss_pred HHHHHHhCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHhccCCeEEEECCCCCCccCCCCCCCCHH----------H----
Confidence 4444554443 3455566432 11224455555 67999999843210 111111 0
Q ss_pred HHHHHHHHHHcCCeee
Q 012987 322 QITYTDLADTYGLLKL 337 (452)
Q Consensus 322 ~~~~~~lA~~~gLl~t 337 (452)
..+.++|.++|+.+.
T Consensus 162 -~p~~~~a~e~~lpv~ 176 (350)
T 2gwg_A 162 -YPIYEKMVELEIPAM 176 (350)
T ss_dssp -HHHHHHHHHHTCCEE
T ss_pred -HHHHHHHHHcCCeEE
Confidence 157888999999876
No 155
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=20.30 E-value=2.2e+02 Score=27.03 Aligned_cols=94 Identities=19% Similarity=0.147 Sum_probs=55.5
Q ss_pred CCHHHHHHHH---HH--cCCEEEEeCCCCCCCc--HHHHHHHHHcCCcEEEEeCCCC-ChhhhhhhhhhhhHHHHHhhHH
Q 012987 251 PLAEVAVQLI---HR--TGGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG-KLVDVNFLEKIDNFLLLLCLRQ 322 (452)
Q Consensus 251 ~~~eeaI~~I---~~--aGGvaVLAHP~~~~~~--~~li~~l~~~GldGIEV~~~~~-~~~~~~~l~~~~n~~~l~~~~~ 322 (452)
++.+|=.+++ .+ .|.++|+||-+..... .++.+...+.|.||+=+..|++ .+.+.. ++
T Consensus 51 Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~----------l~---- 116 (291)
T 3tak_A 51 LSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPYYNKPTQEG----------LY---- 116 (291)
T ss_dssp SCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHH----------HH----
T ss_pred CCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHH----------HH----
Confidence 4555544433 22 3668999998764322 2455566788999999988764 333322 11
Q ss_pred HHHHHHHHHcCCeeeeccCCCCCCCCCCccCCCccCChhHHHHHh
Q 012987 323 ITYTDLADTYGLLKLGGSDYHGRGGHGESELGSVKLPVLVLNDFL 367 (452)
Q Consensus 323 ~~~~~lA~~~gLl~tgGSDfHg~~~~~~~~lG~~~~p~~~~~~~~ 367 (452)
..+.++|+.-++++.- ||-|. ...+.++.+++.++.
T Consensus 117 ~~f~~ia~a~~lPiil---Yn~P~------~tg~~l~~~~~~~La 152 (291)
T 3tak_A 117 QHYKAIAEAVELPLIL---YNVPG------RTGVDLSNDTAVRLA 152 (291)
T ss_dssp HHHHHHHHHCCSCEEE---EECHH------HHSCCCCHHHHHHHT
T ss_pred HHHHHHHHhcCCCEEE---Eeccc------ccCCCCCHHHHHHHH
Confidence 2788888887776653 34331 112455666666654
No 156
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=20.23 E-value=1.7e+02 Score=28.33 Aligned_cols=81 Identities=12% Similarity=0.217 Sum_probs=50.2
Q ss_pred cCCEEEEeCCCCCCCc--HHHHHHHHHcCCcEEEEeCCCC-ChhhhhhhhhhhhHHHHHhhHHHHHHHHHHHcCCeeeec
Q 012987 263 TGGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG-KLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGG 339 (452)
Q Consensus 263 aGGvaVLAHP~~~~~~--~~li~~l~~~GldGIEV~~~~~-~~~~~~~l~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgG 339 (452)
.|.++|+|+-+..... .++.+...+.|.||+=+..|++ .+.+.. ++ ..|.++|+.-++++.-
T Consensus 91 ~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~----------l~----~~f~~va~a~~lPiil- 155 (315)
T 3na8_A 91 AHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPISYWKLNEAE----------VF----QHYRAVGEAIGVPVML- 155 (315)
T ss_dssp TTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCCCHHH----------HH----HHHHHHHHHCSSCEEE-
T ss_pred CCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHH----------HH----HHHHHHHHhCCCcEEE-
Confidence 4668999988754322 2455566788999999998764 333222 11 2788888887776653
Q ss_pred cCCCCCCCCCCccCCCccCChhHHHHH
Q 012987 340 SDYHGRGGHGESELGSVKLPVLVLNDF 366 (452)
Q Consensus 340 SDfHg~~~~~~~~lG~~~~p~~~~~~~ 366 (452)
||-|. ...+.++.+++.++
T Consensus 156 --Yn~P~------~tg~~l~~~~~~~L 174 (315)
T 3na8_A 156 --YNNPG------TSGIDMSVELILRI 174 (315)
T ss_dssp --EECHH------HHSCCCCHHHHHHH
T ss_pred --EeCcc------hhCcCCCHHHHHHH
Confidence 33321 11345667777777
Done!