Query 012988
Match_columns 452
No_of_seqs 391 out of 3835
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 08:23:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012988.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012988hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0605 NDR and related serine 100.0 3.4E-91 7.3E-96 675.2 39.1 434 8-443 63-496 (550)
2 KOG0598 Ribosomal protein S6 k 100.0 4E-73 8.6E-78 529.1 25.4 296 82-429 21-320 (357)
3 KOG0616 cAMP-dependent protein 100.0 2.5E-72 5.3E-77 507.2 26.3 293 82-430 40-338 (355)
4 KOG0608 Warts/lats-like serine 100.0 2.5E-70 5.5E-75 535.1 29.6 406 19-433 562-969 (1034)
5 KOG0694 Serine/threonine prote 100.0 9.6E-69 2.1E-73 532.4 24.3 302 81-436 363-670 (694)
6 KOG0610 Putative serine/threon 100.0 2.5E-66 5.5E-71 487.5 27.3 338 79-419 70-419 (459)
7 KOG0592 3-phosphoinositide-dep 100.0 4.8E-65 1E-69 492.9 23.9 285 82-409 69-355 (604)
8 KOG0612 Rho-associated, coiled 100.0 2.9E-65 6.4E-70 528.3 18.5 302 75-424 64-370 (1317)
9 KOG0690 Serine/threonine prote 100.0 1.6E-64 3.4E-69 461.0 14.2 300 79-431 161-465 (516)
10 KOG0615 Serine/threonine prote 100.0 7E-64 1.5E-68 470.4 18.9 266 84-402 170-447 (475)
11 KOG0575 Polo-like serine/threo 100.0 3.8E-61 8.3E-66 473.1 27.3 255 86-396 18-273 (592)
12 KOG0614 cGMP-dependent protein 100.0 2.6E-61 5.6E-66 462.0 10.3 297 82-430 416-717 (732)
13 cd05628 STKc_NDR1 Catalytic do 100.0 7.9E-58 1.7E-62 455.0 33.1 331 86-430 1-331 (363)
14 cd05599 STKc_NDR_like Catalyti 100.0 9.4E-58 2E-62 454.7 31.9 338 86-434 1-338 (364)
15 KOG0696 Serine/threonine prote 100.0 4E-60 8.7E-65 443.9 13.4 305 81-438 344-654 (683)
16 KOG0581 Mitogen-activated prot 100.0 1.7E-58 3.8E-63 431.1 22.6 260 82-399 75-342 (364)
17 cd05629 STKc_NDR_like_fungal C 100.0 3.8E-57 8.2E-62 452.5 33.5 343 86-430 1-343 (377)
18 KOG0595 Serine/threonine-prote 100.0 2.1E-57 4.6E-62 427.2 26.8 259 84-397 8-273 (429)
19 cd05627 STKc_NDR2 Catalytic do 100.0 1.3E-56 2.7E-61 445.9 31.0 331 86-430 1-331 (360)
20 cd05625 STKc_LATS1 Catalytic d 100.0 1.9E-56 4E-61 448.2 30.7 339 87-429 2-343 (382)
21 cd05626 STKc_LATS2 Catalytic d 100.0 4.2E-56 9.2E-61 445.4 31.7 339 87-430 2-344 (381)
22 cd05598 STKc_LATS Catalytic do 100.0 5.1E-56 1.1E-60 444.2 29.1 342 86-433 1-343 (376)
23 PTZ00263 protein kinase A cata 100.0 1.6E-55 3.5E-60 432.6 30.1 292 81-428 13-309 (329)
24 KOG0986 G protein-coupled rece 100.0 3.4E-57 7.3E-62 429.1 16.3 294 80-427 179-488 (591)
25 KOG0583 Serine/threonine prote 100.0 1.5E-55 3.2E-60 433.9 27.5 259 83-397 14-280 (370)
26 cd05621 STKc_ROCK2 Catalytic d 100.0 1E-54 2.2E-59 433.2 33.1 305 77-430 34-344 (370)
27 PTZ00426 cAMP-dependent protei 100.0 5.6E-55 1.2E-59 430.3 30.5 295 80-430 24-324 (340)
28 cd05601 STKc_CRIK Catalytic do 100.0 5E-55 1.1E-59 429.3 28.4 298 86-434 1-305 (330)
29 cd05571 STKc_PKB Catalytic dom 100.0 9.1E-55 2E-59 426.2 29.6 281 92-425 1-286 (323)
30 KOG0588 Serine/threonine prote 100.0 1.1E-55 2.4E-60 436.0 23.2 261 84-401 10-272 (786)
31 cd05573 STKc_ROCK_NDR_like Cat 100.0 5.3E-55 1.2E-59 432.4 28.2 323 86-431 1-324 (350)
32 cd05612 STKc_PRKX_like Catalyt 100.0 4E-55 8.6E-60 422.5 26.2 285 86-426 1-290 (291)
33 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1E-54 2.2E-59 427.7 29.2 289 86-429 1-294 (333)
34 cd05622 STKc_ROCK1 Catalytic d 100.0 4.4E-54 9.6E-59 428.9 33.0 307 75-430 32-344 (371)
35 KOG0033 Ca2+/calmodulin-depend 100.0 3.6E-57 7.8E-62 398.4 8.6 261 84-398 9-273 (355)
36 cd05596 STKc_ROCK Catalytic do 100.0 8E-54 1.7E-58 427.0 32.9 303 78-430 35-344 (370)
37 cd05585 STKc_YPK1_like Catalyt 100.0 1.8E-53 3.9E-58 415.0 30.0 279 94-425 1-282 (312)
38 cd05624 STKc_MRCK_beta Catalyt 100.0 2.7E-53 5.9E-58 417.2 30.9 292 86-425 1-299 (331)
39 cd05597 STKc_DMPK_like Catalyt 100.0 3.8E-53 8.1E-58 416.2 31.5 294 86-427 1-301 (331)
40 cd05590 STKc_nPKC_eta Catalyti 100.0 1.7E-53 3.6E-58 416.7 28.8 287 92-431 1-294 (320)
41 KOG0695 Serine/threonine prote 100.0 8.5E-55 1.8E-59 398.8 18.1 305 81-437 245-563 (593)
42 KOG0580 Serine/threonine prote 100.0 3.5E-55 7.7E-60 385.1 14.3 259 81-397 17-278 (281)
43 KOG0593 Predicted protein kina 100.0 4.7E-55 1E-59 395.9 15.4 260 86-398 2-290 (396)
44 cd05623 STKc_MRCK_alpha Cataly 100.0 5.8E-53 1.2E-57 415.0 31.6 293 86-426 1-300 (332)
45 cd05587 STKc_cPKC Catalytic do 100.0 4.2E-53 9.1E-58 414.6 30.3 294 87-433 1-300 (324)
46 cd05593 STKc_PKB_gamma Catalyt 100.0 6.6E-53 1.4E-57 413.8 29.7 281 92-425 1-286 (328)
47 KOG0585 Ca2+/calmodulin-depend 100.0 3.7E-54 7.9E-59 410.9 20.0 267 81-397 92-377 (576)
48 cd05614 STKc_MSK2_N N-terminal 100.0 6E-53 1.3E-57 414.9 29.3 287 87-425 1-302 (332)
49 cd05631 STKc_GRK4 Catalytic do 100.0 4.1E-53 8.9E-58 407.2 27.5 277 87-413 1-284 (285)
50 cd05595 STKc_PKB_beta Catalyti 100.0 7.2E-53 1.6E-57 412.8 29.3 282 92-426 1-287 (323)
51 cd05589 STKc_PKN Catalytic dom 100.0 8.2E-53 1.8E-57 412.6 29.7 288 88-429 1-296 (324)
52 cd05616 STKc_cPKC_beta Catalyt 100.0 1.2E-52 2.6E-57 411.2 30.5 290 87-430 1-296 (323)
53 cd05591 STKc_nPKC_epsilon Cata 100.0 1.2E-52 2.5E-57 411.0 30.1 282 92-426 1-290 (321)
54 KOG0600 Cdc2-related protein k 100.0 2.2E-53 4.8E-58 408.8 21.9 262 83-397 114-405 (560)
55 cd05620 STKc_nPKC_delta Cataly 100.0 2.4E-52 5.2E-57 407.8 29.6 281 92-428 1-286 (316)
56 cd05592 STKc_nPKC_theta_delta 100.0 3.1E-52 6.7E-57 407.0 29.5 291 92-438 1-296 (316)
57 cd05575 STKc_SGK Catalytic dom 100.0 3.9E-52 8.4E-57 407.6 29.5 281 92-425 1-286 (323)
58 KOG0597 Serine-threonine prote 100.0 6.1E-54 1.3E-58 416.2 16.0 254 86-397 2-256 (808)
59 cd05588 STKc_aPKC Catalytic do 100.0 4.5E-52 9.8E-57 408.1 29.6 291 92-435 1-307 (329)
60 cd05594 STKc_PKB_alpha Catalyt 100.0 3.6E-52 7.9E-57 408.2 28.3 282 92-426 1-288 (325)
61 KOG0591 NIMA (never in mitosis 100.0 5.9E-55 1.3E-59 391.6 7.6 250 81-382 14-274 (375)
62 cd05618 STKc_aPKC_iota Catalyt 100.0 7E-52 1.5E-56 406.8 30.1 303 92-447 1-319 (329)
63 cd05615 STKc_cPKC_alpha Cataly 100.0 1E-51 2.2E-56 404.6 30.3 290 87-430 1-296 (323)
64 cd05619 STKc_nPKC_theta Cataly 100.0 8.3E-52 1.8E-56 404.0 29.3 288 92-435 1-293 (316)
65 cd05604 STKc_SGK3 Catalytic do 100.0 6.9E-52 1.5E-56 406.2 28.8 283 92-427 1-288 (325)
66 KOG0578 p21-activated serine/t 100.0 3.4E-53 7.3E-58 413.9 19.2 257 83-396 270-527 (550)
67 KOG0661 MAPK related serine/th 100.0 6.9E-54 1.5E-58 409.5 14.0 259 83-397 7-296 (538)
68 cd05570 STKc_PKC Catalytic dom 100.0 7E-52 1.5E-56 404.9 28.6 285 92-432 1-294 (318)
69 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.8E-51 3.8E-56 403.6 30.3 286 92-430 1-300 (327)
70 KOG0032 Ca2+/calmodulin-depend 100.0 6.8E-52 1.5E-56 407.7 27.3 261 84-398 33-299 (382)
71 KOG0599 Phosphorylase kinase g 100.0 7.8E-54 1.7E-58 382.7 11.9 262 86-400 17-291 (411)
72 cd05584 STKc_p70S6K Catalytic 100.0 2E-51 4.4E-56 402.5 29.6 282 91-425 1-291 (323)
73 KOG0659 Cdk activating kinase 100.0 2.5E-52 5.3E-57 372.2 20.3 258 86-397 2-286 (318)
74 KOG0611 Predicted serine/threo 100.0 4.5E-53 9.7E-58 395.8 16.1 255 84-396 51-307 (668)
75 cd05602 STKc_SGK1 Catalytic do 100.0 3.6E-51 7.8E-56 401.1 29.4 281 92-425 1-286 (325)
76 cd05603 STKc_SGK2 Catalytic do 100.0 4.5E-51 9.8E-56 399.7 29.9 282 92-426 1-287 (321)
77 KOG0198 MEKK and related serin 100.0 3.9E-52 8.3E-57 394.6 21.0 259 85-397 16-281 (313)
78 KOG0663 Protein kinase PITSLRE 100.0 8.7E-52 1.9E-56 379.3 21.2 265 82-400 72-369 (419)
79 cd05586 STKc_Sck1_like Catalyt 100.0 3.5E-51 7.6E-56 402.1 26.4 280 94-425 1-288 (330)
80 cd05582 STKc_RSK_N N-terminal 100.0 9.6E-51 2.1E-55 396.9 26.3 281 91-425 1-289 (318)
81 cd05605 STKc_GRK4_like Catalyt 100.0 2.5E-50 5.4E-55 387.8 27.8 277 87-413 1-284 (285)
82 KOG0582 Ste20-like serine/thre 100.0 1.1E-50 2.3E-55 384.9 24.0 266 80-398 20-299 (516)
83 KOG0660 Mitogen-activated prot 100.0 2.5E-51 5.4E-56 381.6 18.3 262 85-398 21-316 (359)
84 cd05608 STKc_GRK1 Catalytic do 100.0 2.8E-50 6.1E-55 386.4 26.1 268 94-412 1-279 (280)
85 cd05580 STKc_PKA Catalytic dom 100.0 1.8E-49 3.9E-54 382.7 30.0 284 86-425 1-289 (290)
86 KOG0594 Protein kinase PCTAIRE 100.0 1.7E-49 3.7E-54 370.5 23.4 261 85-399 10-309 (323)
87 cd05630 STKc_GRK6 Catalytic do 100.0 4.4E-49 9.6E-54 379.2 26.9 274 87-413 1-284 (285)
88 cd05607 STKc_GRK7 Catalytic do 100.0 7.1E-49 1.5E-53 376.1 26.6 266 94-412 1-276 (277)
89 cd07848 STKc_CDKL5 Catalytic d 100.0 6.9E-49 1.5E-53 377.8 26.4 258 86-395 1-287 (287)
90 cd07871 STKc_PCTAIRE3 Catalyti 100.0 6.8E-49 1.5E-53 378.4 26.0 256 85-395 4-288 (288)
91 cd07869 STKc_PFTAIRE1 Catalyti 100.0 9.2E-49 2E-53 380.2 26.6 261 85-400 4-296 (303)
92 cd05609 STKc_MAST Catalytic do 100.0 4.1E-48 8.8E-53 376.0 31.0 303 86-424 1-305 (305)
93 KOG4717 Serine/threonine prote 100.0 8.9E-50 1.9E-54 383.2 18.5 257 86-400 18-278 (864)
94 cd05632 STKc_GRK5 Catalytic do 100.0 3.8E-48 8.2E-53 372.6 28.2 277 87-413 1-284 (285)
95 KOG0192 Tyrosine kinase specif 100.0 1.2E-48 2.6E-53 381.6 24.8 254 81-391 36-298 (362)
96 KOG0658 Glycogen synthase kina 100.0 2.2E-49 4.7E-54 369.2 17.4 253 86-399 24-313 (364)
97 KOG0201 Serine/threonine prote 100.0 7.8E-51 1.7E-55 385.6 7.7 256 86-398 13-269 (467)
98 cd05574 STKc_phototropin_like 100.0 2.3E-47 4.9E-52 372.5 30.0 308 86-415 1-312 (316)
99 cd06649 PKc_MEK2 Catalytic dom 100.0 1.2E-47 2.5E-52 377.2 28.1 261 83-400 2-309 (331)
100 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.1E-47 2.4E-52 378.0 26.7 263 87-400 1-298 (338)
101 PHA03212 serine/threonine kina 100.0 1.5E-47 3.2E-52 384.0 26.1 256 82-398 88-382 (391)
102 PTZ00036 glycogen synthase kin 100.0 1.6E-47 3.6E-52 389.5 26.1 258 82-400 62-359 (440)
103 KOG0589 Serine/threonine prote 100.0 4.8E-48 1E-52 375.7 20.2 257 85-397 3-263 (426)
104 KOG0667 Dual-specificity tyros 100.0 1.7E-47 3.8E-52 380.6 23.7 252 87-398 187-508 (586)
105 cd07862 STKc_CDK6 Catalytic do 100.0 5.8E-47 1.3E-51 364.9 26.6 255 86-395 1-290 (290)
106 cd07853 STKc_NLK Catalytic dom 100.0 4.7E-47 1E-51 378.9 26.8 260 87-399 1-295 (372)
107 KOG0607 MAP kinase-interacting 100.0 3E-48 6.6E-53 353.7 14.8 262 92-401 84-370 (463)
108 cd06650 PKc_MEK1 Catalytic dom 100.0 1.3E-46 2.8E-51 370.1 26.7 259 83-398 2-305 (333)
109 PTZ00284 protein kinase; Provi 100.0 8.5E-47 1.8E-51 387.9 25.9 255 83-397 126-443 (467)
110 cd07876 STKc_JNK2 Catalytic do 100.0 1.7E-46 3.7E-51 373.1 26.8 257 84-397 19-320 (359)
111 cd05577 STKc_GRK Catalytic dom 100.0 1.8E-46 3.9E-51 359.3 25.7 269 94-412 1-276 (277)
112 cd07863 STKc_CDK4 Catalytic do 100.0 2.3E-46 5E-51 360.3 26.5 254 87-395 1-288 (288)
113 PLN00034 mitogen-activated pro 100.0 6.4E-47 1.4E-51 375.2 23.2 254 83-397 71-333 (353)
114 cd07875 STKc_JNK1 Catalytic do 100.0 1.7E-46 3.7E-51 373.7 26.3 257 84-397 22-323 (364)
115 KOG0579 Ste20-like serine/thre 100.0 1.9E-48 4.2E-53 381.4 11.3 261 84-400 30-297 (1187)
116 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.3E-46 5E-51 364.4 25.9 259 85-398 5-292 (309)
117 cd05611 STKc_Rim15_like Cataly 100.0 3.4E-46 7.4E-51 353.7 26.1 257 92-401 2-260 (260)
118 KOG0604 MAP kinase-activated p 100.0 6.3E-48 1.4E-52 349.0 13.0 253 84-397 59-327 (400)
119 cd05610 STKc_MASTL Catalytic d 100.0 8.8E-46 1.9E-50 393.9 31.3 152 85-236 3-154 (669)
120 cd06625 STKc_MEKK3_like Cataly 100.0 7.8E-46 1.7E-50 351.5 27.6 259 86-395 2-263 (263)
121 cd05572 STKc_cGK_PKG Catalytic 100.0 4.7E-46 1E-50 353.1 25.9 257 94-402 1-262 (262)
122 PTZ00283 serine/threonine prot 100.0 4.8E-46 1E-50 383.4 27.2 262 82-397 28-302 (496)
123 PTZ00267 NIMA-related protein 100.0 5.9E-46 1.3E-50 382.1 27.3 257 86-398 67-329 (478)
124 cd05633 STKc_GRK3 Catalytic do 100.0 8E-46 1.7E-50 355.4 26.4 258 93-404 1-267 (279)
125 cd07874 STKc_JNK3 Catalytic do 100.0 7E-46 1.5E-50 368.1 26.1 257 84-397 15-316 (355)
126 PHA03207 serine/threonine kina 100.0 5.7E-46 1.2E-50 373.4 25.7 262 84-404 90-387 (392)
127 PF00069 Pkinase: Protein kina 100.0 3.7E-46 8.1E-51 352.8 22.5 255 88-395 1-260 (260)
128 cd05102 PTKc_VEGFR3 Catalytic 100.0 7E-46 1.5E-50 365.6 24.6 257 81-391 2-329 (338)
129 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2E-45 4.4E-50 356.3 26.8 260 85-399 5-293 (301)
130 cd05606 STKc_beta_ARK Catalyti 100.0 3.4E-45 7.4E-50 350.8 27.9 258 93-405 1-268 (278)
131 KOG0586 Serine/threonine prote 100.0 1.6E-46 3.5E-51 370.1 18.9 259 82-398 52-312 (596)
132 KOG4279 Serine/threonine prote 100.0 1.2E-46 2.6E-51 372.2 17.9 249 93-398 582-838 (1226)
133 cd07878 STKc_p38beta_MAPK11 Ca 100.0 5.6E-46 1.2E-50 367.0 22.6 256 85-398 14-304 (343)
134 KOG4236 Serine/threonine prote 100.0 4.6E-47 9.9E-52 365.3 14.3 257 92-407 570-835 (888)
135 cd06644 STKc_STK10_LOK Catalyt 100.0 4.7E-45 1E-49 352.2 27.4 265 84-404 10-281 (292)
136 cd06615 PKc_MEK Catalytic doma 100.0 4.3E-45 9.4E-50 355.3 26.8 255 86-397 1-292 (308)
137 KOG0574 STE20-like serine/thre 100.0 2E-48 4.4E-53 352.2 3.1 254 87-398 34-289 (502)
138 PTZ00266 NIMA-related protein 100.0 2.4E-45 5.2E-50 391.0 26.6 264 79-399 6-302 (1021)
139 cd07868 STKc_CDK8 Catalytic do 100.0 3E-45 6.5E-50 357.7 24.3 250 91-395 6-317 (317)
140 cd06652 STKc_MEKK2 Catalytic d 100.0 1.7E-44 3.8E-49 343.1 28.1 260 86-396 2-265 (265)
141 cd05579 STKc_MAST_like Catalyt 100.0 5.4E-45 1.2E-49 345.4 24.5 264 94-400 1-265 (265)
142 cd06619 PKc_MKK5 Catalytic dom 100.0 1.1E-44 2.3E-49 347.5 26.5 252 86-399 1-260 (279)
143 cd05613 STKc_MSK1_N N-terminal 100.0 1.2E-44 2.5E-49 349.0 26.9 266 87-404 1-280 (290)
144 KOG0197 Tyrosine kinases [Sign 100.0 1.6E-45 3.4E-50 359.2 20.1 253 79-390 199-455 (468)
145 cd06611 STKc_SLK_like Catalyti 100.0 7.6E-45 1.7E-49 348.4 24.6 259 85-399 4-269 (280)
146 cd06651 STKc_MEKK3 Catalytic d 100.0 1.7E-44 3.7E-49 343.4 26.8 259 86-396 2-265 (266)
147 PHA02988 hypothetical protein; 100.0 8.7E-45 1.9E-49 348.9 24.5 247 86-391 18-274 (283)
148 PHA03209 serine/threonine kina 100.0 6.1E-45 1.3E-49 361.5 23.9 251 85-398 65-357 (357)
149 cd06645 STKc_MAP4K3 Catalytic 100.0 8.5E-45 1.8E-49 345.5 23.9 255 85-394 8-267 (267)
150 cd07861 STKc_CDK1_euk Catalyti 100.0 2E-44 4.3E-49 346.1 26.4 255 87-395 1-285 (285)
151 cd05578 STKc_Yank1 Catalytic d 100.0 9.9E-45 2.1E-49 343.3 23.2 253 87-395 1-258 (258)
152 cd08223 STKc_Nek4 Catalytic do 100.0 5.4E-44 1.2E-48 337.7 28.0 253 87-395 1-257 (257)
153 cd05583 STKc_MSK_N N-terminal 100.0 2E-44 4.3E-49 347.0 25.3 273 87-411 1-287 (288)
154 cd06628 STKc_MAPKKK_Byr2_like 100.0 3.6E-44 7.8E-49 341.0 26.6 260 87-395 1-267 (267)
155 cd06646 STKc_MAP4K5 Catalytic 100.0 1.7E-44 3.8E-49 343.3 24.4 255 85-394 8-267 (267)
156 cd06643 STKc_SLK Catalytic dom 100.0 3.2E-44 6.9E-49 344.5 26.4 255 88-398 7-268 (282)
157 cd06655 STKc_PAK2 Catalytic do 100.0 8.4E-44 1.8E-48 344.3 28.9 256 85-397 18-274 (296)
158 cd07839 STKc_CDK5 Catalytic do 100.0 1.1E-44 2.4E-49 347.8 22.5 255 87-395 1-284 (284)
159 cd05061 PTKc_InsR Catalytic do 100.0 4.9E-44 1.1E-48 344.4 27.0 264 82-400 2-288 (288)
160 cd07847 STKc_CDKL1_4 Catalytic 100.0 4.4E-44 9.5E-49 343.8 26.6 257 86-395 1-286 (286)
161 PHA03390 pk1 serine/threonine- 100.0 3.2E-44 6.9E-49 342.1 25.4 249 86-397 14-267 (267)
162 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.5E-44 3.3E-49 347.4 23.4 255 86-398 1-268 (286)
163 cd06637 STKc_TNIK Catalytic do 100.0 3.3E-44 7.3E-49 342.2 25.5 253 85-395 5-272 (272)
164 cd08529 STKc_FA2-like Catalyti 100.0 8E-44 1.7E-48 336.2 27.8 253 87-395 1-256 (256)
165 cd06610 STKc_OSR1_SPAK Catalyt 100.0 5.6E-44 1.2E-48 339.2 26.9 259 86-395 1-267 (267)
166 cd08227 PK_STRAD_alpha Pseudok 100.0 2.5E-44 5.3E-49 353.0 24.7 264 90-399 2-314 (327)
167 cd06629 STKc_MAPKKK_Bck1_like 100.0 6.8E-44 1.5E-48 340.2 26.9 259 87-395 2-272 (272)
168 PHA03211 serine/threonine kina 100.0 3.1E-44 6.8E-49 364.9 26.0 253 85-397 168-460 (461)
169 cd06609 STKc_MST3_like Catalyt 100.0 4.3E-44 9.2E-49 342.1 25.3 257 86-399 1-258 (274)
170 cd06654 STKc_PAK1 Catalytic do 100.0 7.4E-44 1.6E-48 344.7 27.0 257 84-397 18-275 (296)
171 cd06631 STKc_YSK4 Catalytic do 100.0 7E-44 1.5E-48 338.8 26.4 260 87-395 1-265 (265)
172 KOG4721 Serine/threonine prote 100.0 6.1E-46 1.3E-50 360.4 12.3 246 80-392 118-364 (904)
173 cd06656 STKc_PAK3 Catalytic do 100.0 5.7E-44 1.2E-48 345.7 25.5 256 85-397 18-274 (297)
174 cd05106 PTKc_CSF-1R Catalytic 100.0 3.2E-44 7E-49 358.3 23.8 258 80-391 32-367 (374)
175 cd06630 STKc_MEKK1 Catalytic d 100.0 6.5E-44 1.4E-48 339.3 24.8 260 87-396 1-268 (268)
176 PHA03210 serine/threonine kina 100.0 1.2E-44 2.6E-49 373.9 21.0 286 83-420 145-491 (501)
177 cd06612 STKc_MST1_2 Catalytic 100.0 1.2E-43 2.6E-48 335.0 25.4 253 85-395 2-256 (256)
178 cd07846 STKc_CDKL2_3 Catalytic 100.0 4.7E-44 1E-48 343.7 22.7 257 86-395 1-286 (286)
179 cd07850 STKc_JNK Catalytic dom 100.0 1.1E-43 2.3E-48 352.2 25.5 255 85-396 15-315 (353)
180 cd06613 STKc_MAP4K3_like Catal 100.0 2.3E-43 4.9E-48 334.3 26.7 255 85-394 2-262 (262)
181 cd06639 STKc_myosinIIIB Cataly 100.0 4.6E-43 9.9E-48 338.0 29.2 260 80-396 16-291 (291)
182 cd07845 STKc_CDK10 Catalytic d 100.0 2.3E-43 5E-48 343.2 27.0 260 84-397 5-295 (309)
183 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.1E-43 2.3E-48 341.3 24.3 256 84-397 3-271 (284)
184 cd06626 STKc_MEKK4 Catalytic d 100.0 3.2E-43 7E-48 333.6 27.3 260 87-395 1-264 (264)
185 cd05104 PTKc_Kit Catalytic dom 100.0 8.4E-44 1.8E-48 355.5 24.4 258 81-392 30-370 (375)
186 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.8E-43 4E-48 339.1 25.8 254 84-395 14-282 (282)
187 cd07841 STKc_CDK7 Catalytic do 100.0 1.2E-43 2.6E-48 343.1 24.4 258 87-397 1-287 (298)
188 cd06632 STKc_MEKK1_plant Catal 100.0 2.9E-43 6.3E-48 332.6 26.4 254 87-395 1-258 (258)
189 KOG0577 Serine/threonine prote 100.0 3.3E-45 7.1E-50 356.7 13.3 251 88-397 28-283 (948)
190 cd06653 STKc_MEKK3_like_1 Cata 100.0 5.3E-43 1.1E-47 332.8 28.3 259 86-395 2-264 (264)
191 cd08218 STKc_Nek1 Catalytic do 100.0 4E-43 8.6E-48 331.7 27.2 253 87-395 1-256 (256)
192 cd07867 STKc_CDC2L6 Catalytic 100.0 1.7E-43 3.7E-48 345.1 25.2 249 92-395 7-317 (317)
193 cd08221 STKc_Nek9 Catalytic do 100.0 5.4E-43 1.2E-47 330.8 27.8 253 87-395 1-256 (256)
194 cd06638 STKc_myosinIIIA Cataly 100.0 3.3E-43 7.1E-48 337.9 26.7 258 81-395 13-286 (286)
195 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.8E-43 6.1E-48 335.2 25.7 252 84-391 3-260 (266)
196 cd06617 PKc_MKK3_6 Catalytic d 100.0 2.5E-43 5.5E-48 338.1 25.5 258 86-401 1-270 (283)
197 cd07832 STKc_CCRK Catalytic do 100.0 3E-43 6.5E-48 338.0 26.1 257 87-396 1-286 (286)
198 cd08220 STKc_Nek8 Catalytic do 100.0 4.6E-43 1E-47 331.0 26.7 252 87-395 1-256 (256)
199 cd05096 PTKc_DDR1 Catalytic do 100.0 3.1E-43 6.7E-48 341.5 26.2 255 84-390 3-299 (304)
200 cd05581 STKc_PDK1 Catalytic do 100.0 1.4E-43 3E-48 338.9 23.3 274 86-395 1-280 (280)
201 KOG0983 Mitogen-activated prot 100.0 1.7E-44 3.6E-49 323.0 15.6 260 82-398 88-355 (391)
202 cd05048 PTKc_Ror Catalytic Dom 100.0 2.2E-43 4.7E-48 338.7 24.2 255 83-392 2-279 (283)
203 cd07844 STKc_PCTAIRE_like Cata 100.0 5E-43 1.1E-47 337.7 26.7 256 85-395 4-291 (291)
204 KOG0662 Cyclin-dependent kinas 100.0 3.7E-44 8.1E-49 302.6 16.3 258 87-398 3-289 (292)
205 cd06607 STKc_TAO Catalytic dom 100.0 4.9E-43 1.1E-47 340.6 26.5 256 83-397 12-272 (307)
206 cd06616 PKc_MKK4 Catalytic dom 100.0 1.9E-43 4.1E-48 340.1 23.1 262 85-403 3-278 (288)
207 cd07860 STKc_CDK2_3 Catalytic 100.0 2.6E-43 5.6E-48 338.3 23.9 255 87-395 1-284 (284)
208 cd07833 STKc_CDKL Catalytic do 100.0 3.6E-43 7.7E-48 337.8 24.8 258 86-395 1-288 (288)
209 cd07837 STKc_CdkB_plant Cataly 100.0 5.7E-43 1.2E-47 337.8 26.4 257 86-396 1-295 (295)
210 cd06623 PKc_MAPKK_plant_like C 100.0 4.5E-43 9.8E-48 332.4 25.1 257 86-399 1-263 (264)
211 cd06605 PKc_MAPKK Catalytic do 100.0 1.7E-43 3.8E-48 335.8 22.2 254 86-397 1-262 (265)
212 cd06608 STKc_myosinIII_like Ca 100.0 6.5E-43 1.4E-47 333.1 26.0 255 84-395 4-275 (275)
213 PLN00009 cyclin-dependent kina 100.0 6.5E-43 1.4E-47 337.5 26.2 260 86-399 2-291 (294)
214 KOG4645 MAPKKK (MAP kinase kin 100.0 1.1E-45 2.5E-50 387.6 7.1 260 86-396 1235-1498(1509)
215 KOG0596 Dual specificity; seri 100.0 4.5E-44 9.8E-49 347.2 17.5 262 82-398 357-633 (677)
216 cd06658 STKc_PAK5 Catalytic do 100.0 1.7E-43 3.6E-48 341.6 21.5 256 86-398 22-278 (292)
217 cd08219 STKc_Nek3 Catalytic do 100.0 1.2E-42 2.7E-47 328.3 26.5 249 87-392 1-252 (255)
218 cd08217 STKc_Nek2 Catalytic do 100.0 1.2E-42 2.6E-47 329.3 26.4 253 87-395 1-265 (265)
219 cd07865 STKc_CDK9 Catalytic do 100.0 1.2E-42 2.5E-47 337.8 26.4 261 85-395 11-310 (310)
220 cd06648 STKc_PAK_II Catalytic 100.0 1.5E-42 3.2E-47 333.8 26.8 254 87-397 20-274 (285)
221 cd05088 PTKc_Tie2 Catalytic do 100.0 7.8E-43 1.7E-47 338.7 25.1 252 83-392 4-276 (303)
222 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.7E-42 3.8E-47 334.0 26.8 256 85-395 4-291 (291)
223 cd05052 PTKc_Abl Catalytic dom 100.0 2E-42 4.2E-47 328.7 26.8 252 82-391 2-257 (263)
224 cd07849 STKc_ERK1_2_like Catal 100.0 5.9E-43 1.3E-47 344.5 23.9 261 85-398 4-298 (336)
225 cd07858 STKc_TEY_MAPK_plant Ca 100.0 5.7E-43 1.2E-47 344.8 23.6 260 85-398 4-297 (337)
226 cd06659 STKc_PAK6 Catalytic do 100.0 6.1E-43 1.3E-47 338.5 23.3 254 87-397 22-276 (297)
227 cd07843 STKc_CDC2L1 Catalytic 100.0 6.6E-43 1.4E-47 337.2 23.5 256 85-395 4-293 (293)
228 cd07836 STKc_Pho85 Catalytic d 100.0 1.4E-42 3.1E-47 333.0 25.7 254 87-395 1-284 (284)
229 cd08228 STKc_Nek6 Catalytic do 100.0 1.4E-42 3.1E-47 330.0 25.4 252 86-391 2-260 (267)
230 cd06624 STKc_ASK Catalytic dom 100.0 2.3E-42 5.1E-47 329.0 26.7 255 84-395 6-268 (268)
231 PRK13184 pknD serine/threonine 100.0 1.5E-42 3.3E-47 368.2 28.1 265 86-382 2-278 (932)
232 cd06640 STKc_MST4 Catalytic do 100.0 8.6E-43 1.9E-47 333.8 23.6 256 86-399 4-260 (277)
233 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.3E-42 2.8E-47 348.7 25.8 258 80-391 31-392 (400)
234 cd07842 STKc_CDK8_like Catalyt 100.0 1.4E-42 3.1E-47 338.3 25.2 259 87-395 1-316 (316)
235 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 3.4E-42 7.5E-47 331.4 27.5 257 86-399 1-273 (287)
236 cd05090 PTKc_Ror1 Catalytic do 100.0 2E-42 4.3E-47 332.2 25.8 254 84-392 3-279 (283)
237 cd07855 STKc_ERK5 Catalytic do 100.0 6.6E-43 1.4E-47 343.9 22.9 263 86-398 5-300 (334)
238 cd07831 STKc_MOK Catalytic dom 100.0 1.7E-42 3.7E-47 332.0 25.1 251 88-395 1-282 (282)
239 cd05072 PTKc_Lyn Catalytic dom 100.0 2.6E-42 5.6E-47 327.3 26.1 251 82-391 2-256 (261)
240 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.7E-42 3.8E-47 342.1 25.9 257 84-398 13-304 (343)
241 cd05062 PTKc_IGF-1R Catalytic 100.0 1.8E-42 3.8E-47 331.5 25.1 256 82-392 2-274 (277)
242 cd06647 STKc_PAK_I Catalytic d 100.0 9.2E-43 2E-47 336.6 23.3 257 85-398 18-275 (293)
243 KOG0666 Cyclin C-dependent kin 100.0 3.5E-44 7.5E-49 326.2 12.4 262 86-398 24-343 (438)
244 cd06917 STKc_NAK1_like Catalyt 100.0 1.6E-42 3.5E-47 331.6 24.5 256 87-399 2-262 (277)
245 cd05054 PTKc_VEGFR Catalytic d 100.0 9.7E-43 2.1E-47 343.0 22.9 258 81-392 2-329 (337)
246 cd05093 PTKc_TrkB Catalytic do 100.0 3.4E-42 7.5E-47 331.6 26.2 253 83-391 2-274 (288)
247 cd06614 STKc_PAK Catalytic dom 100.0 5E-42 1.1E-46 330.0 27.1 262 83-401 16-279 (286)
248 cd05049 PTKc_Trk Catalytic dom 100.0 1.8E-42 4E-47 331.6 24.0 252 85-391 4-276 (280)
249 cd05051 PTKc_DDR Catalytic dom 100.0 2.8E-42 6.1E-47 333.2 25.5 256 84-391 3-292 (296)
250 KOG0603 Ribosomal protein S6 k 100.0 1.2E-43 2.7E-48 351.5 16.0 243 84-395 320-566 (612)
251 cd07835 STKc_CDK1_like Catalyt 100.0 2.4E-42 5.3E-47 331.4 24.4 254 88-395 1-283 (283)
252 cd05108 PTKc_EGFR Catalytic do 100.0 2.6E-42 5.6E-47 337.0 25.0 253 84-392 5-264 (316)
253 cd08225 STKc_Nek5 Catalytic do 100.0 4.1E-42 8.9E-47 324.7 25.1 253 87-395 1-257 (257)
254 cd06642 STKc_STK25-YSK1 Cataly 100.0 4.1E-43 8.8E-48 336.0 18.5 256 87-400 5-261 (277)
255 cd05114 PTKc_Tec_Rlk Catalytic 100.0 6.6E-42 1.4E-46 323.6 26.3 248 85-391 3-253 (256)
256 cd06641 STKc_MST3 Catalytic do 100.0 4.7E-42 1E-46 328.7 25.3 253 88-398 6-259 (277)
257 cd05123 STKc_AGC Catalytic dom 100.0 3.9E-42 8.6E-47 323.5 24.3 249 94-395 1-250 (250)
258 cd05032 PTKc_InsR_like Catalyt 100.0 5.5E-42 1.2E-46 327.8 25.6 255 82-391 2-273 (277)
259 KOG0584 Serine/threonine prote 100.0 1.6E-43 3.5E-48 349.3 15.0 256 86-398 39-302 (632)
260 cd05036 PTKc_ALK_LTK Catalytic 100.0 5.8E-42 1.3E-46 328.0 25.4 255 83-392 3-274 (277)
261 cd06635 STKc_TAO1 Catalytic do 100.0 8.6E-42 1.9E-46 333.5 27.0 253 86-397 25-282 (317)
262 KOG1989 ARK protein kinase fam 100.0 4E-43 8.7E-48 359.8 18.3 267 81-399 32-322 (738)
263 cd08229 STKc_Nek7 Catalytic do 100.0 3.2E-42 6.9E-47 327.6 23.3 251 86-390 2-259 (267)
264 cd06633 STKc_TAO3 Catalytic do 100.0 1.3E-41 2.8E-46 331.7 27.9 254 88-400 23-281 (313)
265 cd05122 PKc_STE Catalytic doma 100.0 1.7E-41 3.8E-46 318.4 27.8 251 87-394 1-253 (253)
266 cd05033 PTKc_EphR Catalytic do 100.0 1E-41 2.2E-46 324.3 25.9 253 85-392 3-261 (266)
267 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.4E-41 3E-46 322.9 26.8 252 86-391 2-260 (267)
268 cd07834 STKc_MAPK Catalytic do 100.0 1.8E-42 4E-47 340.0 21.4 262 87-399 1-296 (330)
269 cd06606 STKc_MAPKKK Catalytic 100.0 1.5E-41 3.2E-46 320.2 26.8 256 87-395 1-260 (260)
270 PTZ00024 cyclin-dependent prot 100.0 7.8E-42 1.7E-46 336.3 25.7 273 86-397 8-318 (335)
271 cd06627 STKc_Cdc7_like Catalyt 100.0 1.9E-41 4.2E-46 319.2 27.3 253 87-395 1-254 (254)
272 cd05053 PTKc_FGFR Catalytic do 100.0 8.5E-42 1.8E-46 329.4 25.4 257 81-392 7-287 (293)
273 cd07879 STKc_p38delta_MAPK13 C 100.0 6.4E-42 1.4E-46 338.0 25.1 259 85-402 14-307 (342)
274 cd07840 STKc_CDK9_like Catalyt 100.0 8.1E-42 1.7E-46 327.9 25.1 255 88-395 1-287 (287)
275 cd05068 PTKc_Frk_like Catalyti 100.0 1.4E-41 3.1E-46 322.3 26.4 251 82-391 2-256 (261)
276 cd07866 STKc_BUR1 Catalytic do 100.0 5.8E-42 1.3E-46 333.0 24.3 268 85-395 7-311 (311)
277 cd08215 STKc_Nek Catalytic dom 100.0 2E-41 4.4E-46 319.4 26.9 253 87-395 1-258 (258)
278 cd05084 PTKc_Fes Catalytic dom 100.0 1.1E-41 2.3E-46 321.4 24.9 245 92-391 1-248 (252)
279 cd05089 PTKc_Tie1 Catalytic do 100.0 1.1E-41 2.4E-46 329.6 25.7 249 86-392 2-271 (297)
280 cd08226 PK_STRAD_beta Pseudoki 100.0 2.5E-42 5.4E-47 338.9 21.3 261 92-398 4-314 (328)
281 cd05109 PTKc_HER2 Catalytic do 100.0 1.4E-41 3.1E-46 325.6 26.1 253 83-391 4-263 (279)
282 cd05059 PTKc_Tec_like Catalyti 100.0 9.5E-42 2.1E-46 322.7 24.4 249 85-392 3-254 (256)
283 cd07851 STKc_p38 Catalytic dom 100.0 3.8E-42 8.2E-47 339.7 22.5 256 84-397 13-303 (343)
284 cd07838 STKc_CDK4_6_like Catal 100.0 1.6E-41 3.4E-46 326.0 26.2 253 88-395 1-287 (287)
285 KOG1151 Tousled-like protein k 100.0 1.6E-42 3.5E-47 328.1 18.7 273 78-396 455-745 (775)
286 cd06618 PKc_MKK7 Catalytic dom 100.0 1.3E-41 2.8E-46 328.9 25.5 260 81-397 10-278 (296)
287 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.1E-41 2.5E-46 331.1 25.1 259 79-392 11-295 (307)
288 cd05055 PTKc_PDGFR Catalytic d 100.0 1.4E-41 3E-46 329.8 25.6 257 81-391 30-296 (302)
289 cd07854 STKc_MAPK4_6 Catalytic 100.0 8.6E-42 1.9E-46 337.1 24.6 260 85-398 4-306 (342)
290 cd05092 PTKc_TrkA Catalytic do 100.0 1.2E-41 2.7E-46 326.3 24.9 253 83-391 2-276 (280)
291 cd05091 PTKc_Ror2 Catalytic do 100.0 5.6E-42 1.2E-46 329.0 22.3 254 84-392 3-279 (283)
292 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2E-41 4.2E-46 320.7 25.6 249 85-392 3-254 (256)
293 cd06657 STKc_PAK4 Catalytic do 100.0 1E-41 2.2E-46 329.1 24.1 253 88-397 22-275 (292)
294 cd05071 PTKc_Src Catalytic dom 100.0 1.9E-41 4E-46 322.0 25.5 249 83-391 3-255 (262)
295 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.3E-41 2.8E-46 336.2 25.2 256 84-397 15-305 (345)
296 cd05116 PTKc_Syk Catalytic dom 100.0 2E-41 4.4E-46 320.6 25.2 245 93-391 2-250 (257)
297 cd07864 STKc_CDK12 Catalytic d 100.0 1.5E-41 3.2E-46 329.1 24.7 261 82-395 3-302 (302)
298 cd05148 PTKc_Srm_Brk Catalytic 100.0 7.8E-42 1.7E-46 323.8 22.2 249 84-391 4-256 (261)
299 KOG0194 Protein tyrosine kinas 100.0 3.2E-42 6.8E-47 341.1 20.1 259 79-391 150-415 (474)
300 KOG2345 Serine/threonine prote 100.0 6.6E-43 1.4E-47 309.0 13.6 265 82-392 17-296 (302)
301 cd06634 STKc_TAO2 Catalytic do 100.0 1.7E-41 3.6E-46 330.1 24.9 254 86-398 15-273 (308)
302 KOG1026 Nerve growth factor re 100.0 1.3E-42 2.8E-47 354.5 17.3 257 78-389 478-755 (774)
303 cd05099 PTKc_FGFR4 Catalytic d 100.0 3.3E-41 7.2E-46 328.9 26.4 256 81-391 7-288 (314)
304 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 3.1E-41 6.7E-46 319.8 25.5 249 82-390 2-254 (260)
305 cd05035 PTKc_Axl_like Catalyti 100.0 3E-41 6.4E-46 321.7 25.3 251 88-392 1-268 (273)
306 cd05067 PTKc_Lck_Blk Catalytic 100.0 4E-41 8.6E-46 319.1 25.9 250 82-391 2-255 (260)
307 cd07857 STKc_MPK1 Catalytic do 100.0 2.8E-41 6.1E-46 332.0 25.8 261 87-397 1-297 (332)
308 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.4E-41 5.1E-46 328.3 24.9 258 80-392 9-292 (304)
309 cd00192 PTKc Catalytic domain 100.0 3.7E-41 7.9E-46 318.3 25.6 246 92-392 1-260 (262)
310 cd05066 PTKc_EphR_A Catalytic 100.0 3.5E-41 7.7E-46 320.8 25.6 253 85-391 3-261 (267)
311 cd05094 PTKc_TrkC Catalytic do 100.0 3.4E-41 7.3E-46 325.2 25.7 252 84-391 3-277 (291)
312 cd05046 PTK_CCK4 Pseudokinase 100.0 3.1E-41 6.8E-46 322.3 24.6 254 84-392 3-272 (275)
313 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.7E-41 3.6E-46 335.1 23.2 258 81-392 2-335 (343)
314 cd08530 STKc_CNK2-like Catalyt 100.0 4.2E-41 9.1E-46 317.4 25.0 251 87-395 1-256 (256)
315 cd05107 PTKc_PDGFR_beta Cataly 100.0 2.3E-41 5.1E-46 339.5 24.6 259 80-392 31-395 (401)
316 cd05034 PTKc_Src_like Catalyti 100.0 7.6E-41 1.6E-45 317.1 26.7 250 82-390 2-255 (261)
317 cd05075 PTKc_Axl Catalytic dom 100.0 3.7E-41 8.1E-46 321.2 24.7 251 88-392 1-267 (272)
318 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 5.1E-41 1.1E-45 329.6 26.3 256 84-397 8-293 (328)
319 cd05063 PTKc_EphR_A2 Catalytic 100.0 6.1E-41 1.3E-45 319.1 26.1 255 83-391 2-262 (268)
320 KOG0671 LAMMER dual specificit 100.0 9.3E-43 2E-47 325.5 13.1 257 81-397 84-411 (415)
321 cd07852 STKc_MAPK15 Catalytic 100.0 2.5E-41 5.5E-46 333.0 24.0 265 84-398 5-301 (337)
322 cd05060 PTKc_Syk_like Catalyti 100.0 7.8E-41 1.7E-45 316.5 26.2 245 92-391 1-250 (257)
323 cd05097 PTKc_DDR_like Catalyti 100.0 3.9E-41 8.5E-46 325.4 24.4 256 84-391 3-291 (295)
324 cd05039 PTKc_Csk_like Catalyti 100.0 1E-40 2.2E-45 315.4 26.5 245 83-391 3-251 (256)
325 cd05576 STKc_RPK118_like Catal 100.0 2E-41 4.3E-46 317.0 21.2 231 97-395 4-237 (237)
326 cd05082 PTKc_Csk Catalytic dom 100.0 8.3E-41 1.8E-45 316.1 25.7 244 83-391 3-251 (256)
327 cd05069 PTKc_Yes Catalytic dom 100.0 1.1E-40 2.3E-45 316.2 26.4 249 83-391 3-255 (260)
328 cd05100 PTKc_FGFR3 Catalytic d 100.0 7.4E-41 1.6E-45 329.3 25.9 258 80-392 6-289 (334)
329 cd05050 PTKc_Musk Catalytic do 100.0 6.3E-41 1.4E-45 322.6 24.8 254 83-391 2-284 (288)
330 cd05065 PTKc_EphR_B Catalytic 100.0 9.6E-41 2.1E-45 318.0 25.8 255 85-391 3-263 (269)
331 cd08216 PK_STRAD Pseudokinase 100.0 3.1E-41 6.6E-46 328.9 22.7 255 98-398 12-301 (314)
332 cd07829 STKc_CDK_like Catalyti 100.0 3.6E-41 7.9E-46 322.6 22.6 254 88-395 1-282 (282)
333 cd05111 PTK_HER3 Pseudokinase 100.0 1.2E-40 2.5E-45 319.5 26.1 252 84-391 5-263 (279)
334 KOG0193 Serine/threonine prote 100.0 1.6E-42 3.5E-47 340.2 13.3 258 79-391 385-648 (678)
335 cd05095 PTKc_DDR2 Catalytic do 100.0 1.1E-40 2.4E-45 322.4 25.5 255 85-391 4-292 (296)
336 cd05045 PTKc_RET Catalytic dom 100.0 1E-40 2.2E-45 321.6 25.1 250 87-391 1-281 (290)
337 cd05047 PTKc_Tie Catalytic dom 100.0 1.6E-40 3.4E-45 316.9 25.9 242 92-391 1-263 (270)
338 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.7E-40 3.6E-45 318.9 25.9 252 86-391 3-276 (283)
339 cd05115 PTKc_Zap-70 Catalytic 100.0 1.9E-40 4.1E-45 314.2 25.4 244 93-391 2-250 (257)
340 cd05073 PTKc_Hck Catalytic dom 100.0 2.8E-40 6.1E-45 313.3 26.6 249 82-390 2-254 (260)
341 PF07714 Pkinase_Tyr: Protein 100.0 6.7E-41 1.5E-45 317.7 22.3 248 89-391 2-257 (259)
342 cd05040 PTKc_Ack_like Catalyti 100.0 1.6E-40 3.5E-45 314.0 24.9 246 92-391 1-253 (257)
343 cd07830 STKc_MAK_like Catalyti 100.0 1E-40 2.2E-45 320.0 23.3 252 88-395 1-283 (283)
344 KOG1035 eIF-2alpha kinase GCN2 100.0 7.8E-42 1.7E-46 357.3 16.6 271 85-396 478-875 (1351)
345 cd08222 STKc_Nek11 Catalytic d 100.0 7.8E-41 1.7E-45 316.9 22.0 253 87-395 1-260 (260)
346 cd05057 PTKc_EGFR_like Catalyt 100.0 3.6E-40 7.8E-45 315.9 26.6 251 84-390 5-262 (279)
347 cd05118 STKc_CMGC Catalytic do 100.0 1E-40 2.2E-45 319.7 22.4 254 88-395 1-283 (283)
348 cd05043 PTK_Ryk Pseudokinase d 100.0 3.4E-40 7.4E-45 316.1 25.8 254 83-391 3-271 (280)
349 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2.2E-40 4.8E-45 318.3 24.4 253 87-392 5-279 (284)
350 KOG0669 Cyclin T-dependent kin 100.0 3.7E-43 8E-48 311.0 4.4 263 85-397 16-320 (376)
351 cd05112 PTKc_Itk Catalytic dom 100.0 4.5E-40 9.8E-45 310.9 25.8 249 85-392 3-254 (256)
352 smart00219 TyrKc Tyrosine kina 100.0 4.5E-40 9.7E-45 310.6 25.4 248 88-391 1-256 (258)
353 cd05041 PTKc_Fes_like Catalyti 100.0 5.2E-40 1.1E-44 309.5 25.5 244 92-391 1-247 (251)
354 cd05056 PTKc_FAK Catalytic dom 100.0 5.1E-40 1.1E-44 313.2 25.2 252 83-391 3-260 (270)
355 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 6.7E-40 1.4E-44 314.7 26.0 252 86-391 4-278 (284)
356 cd05110 PTKc_HER4 Catalytic do 100.0 3.8E-40 8.2E-45 319.8 23.8 253 84-392 5-264 (303)
357 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.5E-40 3.2E-45 315.0 20.1 237 92-392 1-256 (258)
358 cd05085 PTKc_Fer Catalytic dom 100.0 1.1E-39 2.4E-44 307.1 25.9 243 92-391 1-246 (250)
359 KOG1187 Serine/threonine prote 100.0 2E-40 4.4E-45 325.8 21.5 202 82-337 71-280 (361)
360 cd05083 PTKc_Chk Catalytic dom 100.0 7.5E-40 1.6E-44 309.2 24.5 242 84-391 4-249 (254)
361 cd05042 PTKc_Aatyk Catalytic d 100.0 9.4E-40 2E-44 311.2 25.0 247 92-391 1-265 (269)
362 KOG0665 Jun-N-terminal kinase 100.0 3.6E-41 7.7E-46 308.1 14.3 268 85-412 16-328 (369)
363 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 8.6E-40 1.9E-44 310.6 24.3 237 92-392 1-260 (262)
364 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.3E-39 2.9E-44 310.3 25.6 247 92-391 1-265 (269)
365 cd08528 STKc_Nek10 Catalytic d 100.0 2E-39 4.3E-44 308.9 24.7 251 87-392 1-266 (269)
366 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.2E-39 2.6E-44 311.8 23.1 236 93-392 2-272 (274)
367 cd05058 PTKc_Met_Ron Catalytic 100.0 2E-39 4.4E-44 307.4 24.5 247 92-391 1-254 (262)
368 cd05044 PTKc_c-ros Catalytic d 100.0 1.1E-39 2.4E-44 310.5 22.5 245 92-391 1-265 (269)
369 KOG1095 Protein tyrosine kinas 100.0 5.6E-40 1.2E-44 346.5 22.1 254 83-391 689-956 (1025)
370 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2E-39 4.4E-44 310.8 23.8 254 85-391 3-278 (284)
371 KOG0668 Casein kinase II, alph 100.0 7.1E-41 1.5E-45 292.7 12.1 253 84-398 36-328 (338)
372 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2E-39 4.2E-44 306.7 23.0 234 92-391 1-256 (259)
373 PHA02882 putative serine/threo 100.0 2.7E-39 5.8E-44 312.6 24.2 258 83-391 9-291 (294)
374 KOG4250 TANK binding protein k 100.0 2.8E-40 6E-45 330.2 15.5 199 87-337 14-226 (732)
375 cd05074 PTKc_Tyro3 Catalytic d 100.0 5.7E-39 1.2E-43 306.2 23.8 250 88-391 1-267 (273)
376 PLN03225 Serine/threonine-prot 100.0 4.5E-39 9.7E-44 334.8 24.1 264 80-403 126-461 (566)
377 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.4E-38 3E-43 303.2 25.6 248 92-391 1-264 (268)
378 KOG0587 Traf2- and Nck-interac 100.0 2.8E-39 6.1E-44 328.8 21.2 261 81-398 14-288 (953)
379 KOG0670 U4/U6-associated splic 100.0 1.4E-40 3.1E-45 320.3 10.4 262 77-397 423-751 (752)
380 KOG1006 Mitogen-activated prot 100.0 7E-41 1.5E-45 298.7 6.3 262 81-398 59-333 (361)
381 PLN03224 probable serine/threo 100.0 1E-37 2.2E-42 317.3 25.0 265 81-396 140-504 (507)
382 KOG1290 Serine/threonine prote 100.0 4.6E-38 1E-42 301.5 20.0 138 78-220 69-222 (590)
383 KOG0664 Nemo-like MAPK-related 100.0 7.3E-40 1.6E-44 293.1 5.0 260 86-398 53-349 (449)
384 smart00220 S_TKc Serine/Threon 100.0 7.7E-37 1.7E-41 284.7 23.3 241 98-395 1-244 (244)
385 KOG0603 Ribosomal protein S6 k 100.0 4.1E-39 8.8E-44 319.4 6.5 282 93-438 1-291 (612)
386 KOG0199 ACK and related non-re 100.0 8.7E-38 1.9E-42 310.0 15.0 253 85-392 109-368 (1039)
387 KOG1152 Signal transduction se 100.0 4E-38 8.7E-43 306.9 11.4 202 85-337 560-771 (772)
388 KOG4257 Focal adhesion tyrosin 100.0 1.5E-37 3.2E-42 305.0 15.4 246 83-382 386-638 (974)
389 KOG1094 Discoidin domain recep 100.0 2.5E-37 5.5E-42 301.6 16.3 257 82-391 534-799 (807)
390 KOG4278 Protein tyrosine kinas 100.0 4.3E-37 9.4E-42 301.3 17.2 252 80-389 261-516 (1157)
391 KOG0196 Tyrosine kinase, EPH ( 100.0 2.4E-37 5.2E-42 310.6 13.8 255 81-391 624-886 (996)
392 KOG1027 Serine/threonine prote 100.0 2E-37 4.3E-42 314.0 13.3 245 91-396 514-771 (903)
393 KOG0984 Mitogen-activated prot 100.0 1.2E-36 2.7E-41 262.4 13.2 216 81-349 41-267 (282)
394 KOG1167 Serine/threonine prote 100.0 4.3E-36 9.4E-41 284.4 12.6 294 85-399 35-388 (418)
395 PLN00113 leucine-rich repeat r 100.0 4.5E-35 9.8E-40 326.6 19.7 239 87-392 691-947 (968)
396 KOG1025 Epidermal growth facto 100.0 6E-35 1.3E-39 294.4 17.8 246 89-390 699-951 (1177)
397 KOG0606 Microtubule-associated 100.0 6.5E-36 1.4E-40 309.8 10.9 268 84-427 81-350 (1205)
398 KOG0576 Mitogen-activated prot 100.0 2.4E-36 5.2E-41 299.0 7.1 260 83-397 12-276 (829)
399 KOG3653 Transforming growth fa 100.0 1.4E-34 3.1E-39 276.9 15.2 243 85-383 209-493 (534)
400 KOG0200 Fibroblast/platelet-de 100.0 1.2E-33 2.5E-38 296.9 23.1 256 80-391 290-574 (609)
401 KOG2052 Activin A type IB rece 100.0 5.5E-33 1.2E-37 264.3 18.2 250 84-390 209-497 (513)
402 smart00221 STYKc Protein kinas 100.0 1.4E-31 3.1E-36 246.8 21.8 211 88-348 1-215 (225)
403 cd00180 PKc Catalytic domain o 100.0 6.1E-31 1.3E-35 238.8 22.9 211 94-393 1-215 (215)
404 KOG1345 Serine/threonine kinas 100.0 6.9E-33 1.5E-37 248.3 9.1 255 85-396 23-291 (378)
405 PLN00181 protein SPA1-RELATED; 100.0 1.3E-31 2.8E-36 291.8 11.1 232 143-397 29-270 (793)
406 KOG1024 Receptor-like protein 100.0 1.7E-29 3.6E-34 236.8 15.3 258 78-390 276-549 (563)
407 KOG0590 Checkpoint kinase and 100.0 1.3E-30 2.8E-35 270.8 4.1 262 89-399 321-592 (601)
408 smart00750 KIND kinase non-cat 100.0 5.8E-29 1.3E-33 221.6 11.6 161 171-396 1-169 (176)
409 COG0515 SPS1 Serine/threonine 100.0 5.1E-27 1.1E-31 227.1 25.9 261 88-397 2-280 (384)
410 PRK09188 serine/threonine prot 100.0 5.6E-28 1.2E-32 236.3 16.8 146 82-237 14-163 (365)
411 KOG1164 Casein kinase (serine/ 100.0 1.8E-26 3.9E-31 225.6 23.2 253 87-382 19-286 (322)
412 KOG1163 Casein kinase (serine/ 99.9 1.8E-26 4E-31 203.9 15.0 245 82-374 11-264 (341)
413 KOG0606 Microtubule-associated 99.9 8.8E-28 1.9E-32 249.7 7.3 329 82-430 800-1130(1205)
414 KOG1165 Casein kinase (serine/ 99.9 2.1E-25 4.5E-30 205.6 15.4 218 83-348 25-252 (449)
415 cd05147 RIO1_euk RIO kinase fa 99.9 1.6E-25 3.4E-30 201.6 13.1 143 91-237 2-168 (190)
416 PRK10359 lipopolysaccharide co 99.9 4E-25 8.6E-30 201.6 13.6 142 84-236 29-184 (232)
417 cd05145 RIO1_like RIO kinase f 99.9 3.4E-24 7.3E-29 193.4 16.4 145 90-238 1-169 (190)
418 PF14531 Kinase-like: Kinase-l 99.9 1.8E-24 3.8E-29 203.2 14.1 232 88-380 14-288 (288)
419 PRK12274 serine/threonine prot 99.9 1.1E-23 2.3E-28 188.2 15.5 202 89-339 5-211 (218)
420 KOG4158 BRPK/PTEN-induced prot 99.9 2.8E-24 6.1E-29 202.4 11.9 274 80-400 151-521 (598)
421 KOG1240 Protein kinase contain 99.9 2E-24 4.4E-29 225.0 6.7 243 87-392 24-291 (1431)
422 PRK10345 hypothetical protein; 99.9 2.9E-22 6.2E-27 182.2 15.6 136 91-235 7-158 (210)
423 KOG0195 Integrin-linked kinase 99.9 3.2E-23 6.9E-28 186.4 6.8 238 83-381 187-434 (448)
424 smart00090 RIO RIO-like kinase 99.9 7.5E-22 1.6E-26 183.7 13.3 146 87-237 29-199 (237)
425 KOG0590 Checkpoint kinase and 99.9 2.3E-23 5.1E-28 216.7 -1.8 263 85-397 19-291 (601)
426 KOG1166 Mitotic checkpoint ser 99.9 2E-21 4.4E-26 206.3 12.3 199 81-333 693-901 (974)
427 PRK14879 serine/threonine prot 99.8 3.8E-20 8.2E-25 169.8 14.6 139 91-236 1-144 (211)
428 TIGR03724 arch_bud32 Kae1-asso 99.8 6.1E-20 1.3E-24 166.9 13.7 134 93-236 1-139 (199)
429 cd05144 RIO2_C RIO kinase fami 99.8 8.8E-20 1.9E-24 165.8 12.6 139 88-237 17-176 (198)
430 cd05119 RIO RIO kinase family, 99.8 3.2E-19 6.9E-24 160.5 11.9 140 91-237 2-165 (187)
431 PRK09605 bifunctional UGMP fam 99.8 4.2E-19 9E-24 185.2 14.5 138 88-236 335-477 (535)
432 KOG1033 eIF-2alpha kinase PEK/ 99.8 1.8E-20 4E-25 183.6 3.7 181 159-395 329-515 (516)
433 PRK01723 3-deoxy-D-manno-octul 99.8 1.9E-17 4.2E-22 154.4 15.4 138 92-236 37-192 (239)
434 KOG1023 Natriuretic peptide re 99.7 1.8E-17 3.9E-22 165.6 13.0 201 140-390 1-218 (484)
435 cd05120 APH_ChoK_like Aminogly 99.7 4.2E-17 9.2E-22 140.4 12.5 133 90-236 2-139 (155)
436 KOG0601 Cyclin-dependent kinas 99.7 6.3E-17 1.4E-21 161.7 6.0 259 85-398 113-385 (524)
437 PRK04750 ubiB putative ubiquin 99.6 7.1E-16 1.5E-20 157.9 7.6 145 86-238 120-316 (537)
438 TIGR01982 UbiB 2-polyprenylphe 99.6 2.4E-14 5.2E-19 144.9 14.0 140 92-237 123-308 (437)
439 KOG0601 Cyclin-dependent kinas 99.6 3.7E-15 7.9E-20 149.2 6.3 254 81-396 260-518 (524)
440 cd05146 RIO3_euk RIO kinase fa 99.5 1.8E-13 3.9E-18 122.5 14.7 141 91-236 2-174 (197)
441 cd05151 ChoK Choline Kinase (C 99.5 5.9E-14 1.3E-18 123.9 10.7 129 91-236 3-137 (170)
442 KOG1266 Protein kinase [Signal 99.5 3.2E-14 6.9E-19 132.0 8.1 212 137-403 118-342 (458)
443 KOG1243 Protein kinase [Genera 99.4 1.1E-12 2.5E-17 132.7 13.3 140 88-236 15-155 (690)
444 COG3642 Mn2+-dependent serine/ 99.4 2.4E-12 5.1E-17 111.5 12.5 134 92-235 2-140 (204)
445 KOG3087 Serine/threonine prote 99.3 2.1E-11 4.6E-16 105.1 13.0 144 90-235 11-165 (229)
446 cd05154 ACAD10_11_like Acyl-Co 99.3 1.5E-11 3.3E-16 113.2 11.6 141 92-236 4-207 (223)
447 KOG2137 Protein kinase [Signal 99.3 4E-12 8.6E-17 129.3 5.7 169 192-403 105-276 (700)
448 KOG3741 Poly(A) ribonuclease s 99.3 1.9E-10 4.1E-15 113.4 16.9 210 99-392 289-521 (655)
449 PRK15123 lipopolysaccharide co 99.1 2.4E-09 5.1E-14 101.2 16.8 133 101-235 37-194 (268)
450 PF01163 RIO1: RIO1 family; I 99.1 5E-10 1.1E-14 99.9 10.2 128 101-236 1-156 (188)
451 PF06293 Kdo: Lipopolysacchari 99.0 1.1E-08 2.5E-13 93.3 13.5 107 130-236 55-171 (206)
452 COG4248 Uncharacterized protei 99.0 2.3E-08 5.1E-13 96.6 15.7 232 90-382 15-289 (637)
453 KOG0576 Mitogen-activated prot 98.9 1.9E-10 4E-15 116.0 -2.1 245 84-397 240-489 (829)
454 COG0478 RIO-like serine/threon 98.8 1.8E-08 4E-13 92.7 10.2 137 89-235 94-251 (304)
455 PRK09902 hypothetical protein; 98.8 1.8E-07 4E-12 84.1 13.8 140 95-236 27-180 (216)
456 PF06176 WaaY: Lipopolysacchar 98.7 2.5E-07 5.4E-12 83.5 13.5 141 84-235 29-183 (229)
457 COG1718 RIO1 Serine/threonine 98.7 3.5E-07 7.6E-12 83.5 13.0 139 92-237 54-217 (268)
458 COG0661 AarF Predicted unusual 98.7 1.9E-07 4E-12 95.7 12.0 144 92-239 131-318 (517)
459 TIGR02172 Fb_sc_TIGR02172 Fibr 98.6 7.1E-07 1.5E-11 82.5 14.1 135 92-236 7-183 (226)
460 KOG1035 eIF-2alpha kinase GCN2 98.6 2.2E-06 4.7E-11 92.7 17.1 201 131-397 227-439 (1351)
461 PF01636 APH: Phosphotransfera 98.5 2E-06 4.3E-11 79.5 13.7 138 91-235 2-197 (239)
462 PF13095 FTA2: Kinetochore Sim 98.4 4.3E-06 9.4E-11 74.7 13.2 129 85-233 36-206 (207)
463 cd05150 APH Aminoglycoside 3'- 98.4 5E-06 1.1E-10 77.9 12.9 134 94-235 6-193 (244)
464 KOG1235 Predicted unusual prot 98.3 6E-06 1.3E-10 84.5 11.6 140 92-237 167-356 (538)
465 PLN02876 acyl-CoA dehydrogenas 98.3 1.5E-05 3.2E-10 87.8 15.2 146 90-237 42-259 (822)
466 COG2112 Predicted Ser/Thr prot 98.2 9.3E-06 2E-10 70.4 10.2 129 89-235 25-155 (201)
467 PF10707 YrbL-PhoP_reg: PhoP r 98.2 7E-05 1.5E-09 67.5 15.0 134 92-233 7-170 (199)
468 cd05155 APH_ChoK_like_1 Unchar 98.1 1.8E-05 3.9E-10 73.7 10.5 74 91-174 2-82 (235)
469 cd05157 ETNK_euk Ethanolamine 98.0 8.6E-05 1.9E-09 69.0 13.0 137 91-235 3-201 (235)
470 PRK09550 mtnK methylthioribose 98.0 0.00033 7.2E-09 69.9 16.1 80 91-172 31-117 (401)
471 KOG1826 Ras GTPase activating 97.9 5E-06 1.1E-10 91.9 3.1 254 85-396 1228-1496(2724)
472 cd05153 HomoserineK_II Homoser 97.9 9.1E-05 2E-09 71.5 10.5 138 90-235 18-205 (296)
473 PRK10593 hypothetical protein; 97.9 0.00032 6.8E-09 67.8 13.9 77 90-173 18-100 (297)
474 PF12260 PIP49_C: Protein-kina 97.8 0.00011 2.3E-09 65.9 8.5 99 134-236 7-112 (188)
475 TIGR02721 ycfN_thiK thiamine k 97.7 0.00022 4.8E-09 67.3 10.5 134 93-236 3-176 (256)
476 TIGR00938 thrB_alt homoserine 97.7 0.00072 1.6E-08 65.6 13.7 143 86-235 22-217 (307)
477 cd05156 ChoK_euk Choline Kinas 97.7 0.00035 7.6E-09 67.6 11.3 137 91-235 3-213 (302)
478 KOG2270 Serine/threonine prote 97.6 0.00085 1.8E-08 64.9 11.5 143 90-236 148-314 (520)
479 KOG2268 Serine/threonine prote 97.5 6.4E-05 1.4E-09 71.3 3.7 137 87-234 93-250 (465)
480 PRK05231 homoserine kinase; Pr 97.4 0.0034 7.3E-08 61.2 14.0 137 91-235 27-217 (319)
481 TIGR01767 MTRK 5-methylthiorib 97.3 0.0023 5E-08 62.7 11.6 83 93-177 2-92 (370)
482 PLN02236 choline kinase 97.2 0.0044 9.6E-08 61.1 11.8 139 90-236 40-232 (344)
483 cd05152 MPH2' Macrolide 2'-Pho 97.1 0.005 1.1E-07 58.8 11.6 31 206-236 186-217 (276)
484 TIGR02906 spore_CotS spore coa 97.1 0.015 3.3E-07 56.3 15.1 30 205-235 187-216 (313)
485 COG3173 Predicted aminoglycosi 97.1 0.0062 1.3E-07 58.8 11.2 149 87-239 26-232 (321)
486 PLN02756 S-methyl-5-thioribose 97.0 0.0078 1.7E-07 60.1 11.9 77 90-170 36-119 (418)
487 PLN02421 phosphotransferase, a 97.0 0.0054 1.2E-07 60.2 10.6 142 86-236 15-214 (330)
488 PRK12396 5-methylribose kinase 96.9 0.0089 1.9E-07 59.4 10.7 85 91-177 34-125 (409)
489 KOG1093 Predicted protein kina 96.7 0.0041 8.8E-08 62.7 7.1 81 314-398 110-200 (725)
490 PTZ00384 choline kinase; Provi 96.5 0.037 7.9E-07 55.3 12.5 77 90-174 54-137 (383)
491 PF03881 Fructosamin_kin: Fruc 96.2 0.12 2.6E-06 49.5 13.6 75 89-171 20-97 (288)
492 TIGR02904 spore_ysxE spore coa 96.1 0.12 2.5E-06 50.3 13.4 30 206-235 197-226 (309)
493 COG5072 ALK1 Serine/threonine 96.1 0.02 4.3E-07 55.7 7.6 73 157-235 297-370 (488)
494 PF07387 Seadorna_VP7: Seadorn 96.1 0.032 7E-07 50.6 8.1 101 113-232 87-189 (308)
495 PF01633 Choline_kinase: Choli 95.9 0.043 9.2E-07 50.0 8.9 30 206-235 144-174 (211)
496 PRK11768 serine/threonine prot 95.9 0.32 6.9E-06 47.6 15.4 70 98-172 37-113 (325)
497 PRK06148 hypothetical protein; 95.7 0.22 4.9E-06 56.2 14.8 138 91-235 30-236 (1013)
498 KOG1236 Predicted unusual prot 95.3 0.07 1.5E-06 52.7 8.0 61 161-222 320-381 (565)
499 smart00133 S_TK_X Extension to 95.2 0.021 4.5E-07 41.1 3.1 35 396-430 1-38 (64)
500 PTZ00296 choline kinase; Provi 95.1 0.41 8.9E-06 48.8 13.2 80 85-173 105-193 (442)
No 1
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=3.4e-91 Score=675.19 Aligned_cols=434 Identities=64% Similarity=1.001 Sum_probs=394.0
Q ss_pred hccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhhhcCCCCCCC
Q 012988 8 EVLGSKLTMEKVAAAKQFIENHYRAQMKNIQERKERRWVLERKLASSDVPMEEQINLIKDLERKETEFMRLKRHKICVDD 87 (452)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (452)
..+.+..|+++.+++++|++++|..+++..++|++|++.+++.+++.+.+.+.+.+.++.+..++.++.++++.++..+|
T Consensus 63 ~~~~s~~T~~k~~~~k~~ien~Y~~~~~~~~~R~er~~~le~~l~~~~~s~~~~~~~~~~~~~kEte~lR~~R~r~~~~D 142 (550)
T KOG0605|consen 63 EFLVSNKTKRKVAAAKQYIENHYSSQIKYLNERKERRKELEEKLASEDVSEEEQNELLKSLLSKETEYLRLRRTRLSLDD 142 (550)
T ss_pred ccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHhhHHHHHHHhccccCCccc
Confidence 34678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEee
Q 012988 88 FELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEY 167 (452)
Q Consensus 88 y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~ 167 (452)
|++++.||+||||.||+|+.+.||..||+|+++|+.+...+++++++.|++||...++|+||+||++|++.+++||||||
T Consensus 143 Fe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEy 222 (550)
T KOG0605|consen 143 FELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEY 222 (550)
T ss_pred chhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccc
Q 012988 168 LPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEH 247 (452)
Q Consensus 168 ~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~ 247 (452)
++||++..+|.+.+.|+++.+++|+++++.|++.||+.|+|||||||+|+|||..||+||+|||||..+........+..
T Consensus 223 lPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~ 302 (550)
T KOG0605|consen 223 LPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRL 302 (550)
T ss_pred cCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999987765433221111
Q ss_pred cccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHH
Q 012988 248 KTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 327 (452)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~e 327 (452)
......+.... ....++..+...++.....+...|+.+++..+.+.+|||.|||||++.+.+|+..+||||||||+||
T Consensus 303 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyE 380 (550)
T KOG0605|consen 303 DEQMQINLSEA--KPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYE 380 (550)
T ss_pred hhhhhhhhccC--CCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHH
Confidence 11111111111 1122222234456667899999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhcCccccCCCCCHHHHhcCCCcCCCCccccccCC
Q 012988 328 MLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLCDVEHRLGTGGAHQIKAHPWFKDVVWDKLYEME 407 (452)
Q Consensus 328 lltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~dp~~R~~~~~~~eil~hp~f~~~~~~~l~~~~ 407 (452)
||.|.+||.+.++.+++.+|+.|+..+.+|....++++|+|||.+||+||.+|+|.++++||++||||++|+|+.+.+.+
T Consensus 381 mLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~d~~~RLG~~G~~EIK~HPfF~~v~W~~l~~~~ 460 (550)
T KOG0605|consen 381 MLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLCDPENRLGSKGAEEIKKHPFFKGVDWDHLREMP 460 (550)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhcCHHHhcCcccHHHHhcCCccccCCcchhhcCC
Confidence 99999999999999999999999999999999999999999999999999999998899999999999999999999999
Q ss_pred CCccccCCCCccCCCCCCCCCCCCCCCCCCCCCCCC
Q 012988 408 AAFKPEINGELDTQNFMKFDELDPPASGRTSSGPSR 443 (452)
Q Consensus 408 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (452)
+||+|.++++.|++||++|++.+........+.++.
T Consensus 461 apfvP~v~~~~DT~yFddF~e~~~~~~~~~~~~~~~ 496 (550)
T KOG0605|consen 461 APFVPQVNSELDTQYFDDFPEEDSMTPTADKSGPSR 496 (550)
T ss_pred CCCCCCCCCcccccccccCcccccCcccccccccch
Confidence 999999999999999999998876666666555444
No 2
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=4e-73 Score=529.14 Aligned_cols=296 Identities=48% Similarity=0.850 Sum_probs=272.3
Q ss_pred CCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeE
Q 012988 82 KICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYL 161 (452)
Q Consensus 82 ~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~ 161 (452)
....++|+++++||+|+||+||+++.+.|++.||+|+++|..+.....+.++..|+.||..++||+||++++.|++.+.+
T Consensus 21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kL 100 (357)
T KOG0598|consen 21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKL 100 (357)
T ss_pred cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeE
Confidence 46679999999999999999999999999999999999999999988999999999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 162 YLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
|||+||+.||+|..+|++++.|+|+.+++|+++|+.||.|||+.|||||||||||||+|.+||++|+|||||+..-.
T Consensus 101 ylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~--- 177 (357)
T KOG0598|consen 101 YLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK--- 177 (357)
T ss_pred EEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhccc---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999985321
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSL 321 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSl 321 (452)
....+.++|||+.|||||++.+.+|+.++|||||
T Consensus 178 ----------------------------------------------~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsL 211 (357)
T KOG0598|consen 178 ----------------------------------------------DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSL 211 (357)
T ss_pred ----------------------------------------------CCCccccccCCccccChHHHhcCCCCcccchHhH
Confidence 1123446899999999999999999999999999
Q ss_pred hHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCC-CCHHHHhcCCCcCCCC
Q 012988 322 GAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGT-GGAHQIKAHPWFKDVV 399 (452)
Q Consensus 322 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~-~~~~eil~hp~f~~~~ 399 (452)
|+++|||++|.+||.+.+....+.+|...+ ...+. ..++.+++|||++||. ||++|+|. .++.+|.+||||.++|
T Consensus 212 GillYeML~G~pPF~~~~~~~~~~~I~~~k--~~~~p-~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~in 288 (357)
T KOG0598|consen 212 GILLYEMLTGKPPFYAEDVKKMYDKILKGK--LPLPP-GYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGIN 288 (357)
T ss_pred HHHHHHHhhCCCCCcCccHHHHHHHHhcCc--CCCCC-ccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCC
Confidence 999999999999999999999999998743 23332 2589999999999999 99999973 3899999999999999
Q ss_pred ccccc--cCCCCccccCCCCccCCCCCCCCCC
Q 012988 400 WDKLY--EMEAAFKPEINGELDTQNFMKFDEL 429 (452)
Q Consensus 400 ~~~l~--~~~~~~~p~~~~~~~~~~~~~~~~~ 429 (452)
|+.+. ++.|||+|...+..+.++|+.....
T Consensus 289 W~~l~~k~l~PpF~P~~~~~~~~~~Fd~eft~ 320 (357)
T KOG0598|consen 289 WEKLLAKKLSPPFKPNVTGLEDTSNFDNEFTS 320 (357)
T ss_pred HHHHHhcCCCCCeecCCCCccccccccHHHHh
Confidence 99995 6899999999999999999864433
No 3
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-72 Score=507.16 Aligned_cols=293 Identities=47% Similarity=0.915 Sum_probs=277.7
Q ss_pred CCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeE
Q 012988 82 KICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYL 161 (452)
Q Consensus 82 ~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~ 161 (452)
...+++|++++.||.|+||+|.+++.+.+|..||+|++.+..+.+-.++++..+|+.+|+.+.||++++|++.|.+.+++
T Consensus 40 ~~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~l 119 (355)
T KOG0616|consen 40 PYSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNL 119 (355)
T ss_pred CcchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeE
Confidence 37789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 162 YLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
||||||++||.|.+++++.++|++..+++|++||+.||+|||+++|++|||||||||||.+|++||+|||+|+...
T Consensus 120 ymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~---- 195 (355)
T KOG0616|consen 120 YMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVS---- 195 (355)
T ss_pred EEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEec----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999763
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSL 321 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSl 321 (452)
..+.+.||||.|+|||++...+|+.++|||||
T Consensus 196 ------------------------------------------------~rT~TlCGTPeYLAPEii~sk~ynkavDWWal 227 (355)
T KOG0616|consen 196 ------------------------------------------------GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWAL 227 (355)
T ss_pred ------------------------------------------------CcEEEecCCccccChHHhhcCCCCcchhHHHH
Confidence 23568999999999999999999999999999
Q ss_pred hHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCC--CCHHHHhcCCCcCCC
Q 012988 322 GAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGT--GGAHQIKAHPWFKDV 398 (452)
Q Consensus 322 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~--~~~~eil~hp~f~~~ 398 (452)
||++|||+.|.+||...++..++.+|+. ..+.||. .++++++|||++||+ |-.+|.|. ++..+|+.||||+++
T Consensus 228 GVLIYEMlaG~pPF~~~~~~~iY~KI~~--~~v~fP~--~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v 303 (355)
T KOG0616|consen 228 GVLIYEMLAGYPPFYDDNPIQIYEKILE--GKVKFPS--YFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGV 303 (355)
T ss_pred HHHHHHHHcCCCCCcCCChHHHHHHHHh--CcccCCc--ccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccc
Confidence 9999999999999999999999999998 6778886 799999999999999 99999886 379999999999999
Q ss_pred Cccccc--cCCCCccc-cCCCCccCCCCCCCCCCC
Q 012988 399 VWDKLY--EMEAAFKP-EINGELDTQNFMKFDELD 430 (452)
Q Consensus 399 ~~~~l~--~~~~~~~p-~~~~~~~~~~~~~~~~~~ 430 (452)
+|..+. ++++|++| .+..+.|+++|+.+...+
T Consensus 304 ~W~~i~~r~ie~P~~pp~~~~~gdtsnfd~y~e~~ 338 (355)
T KOG0616|consen 304 DWEAILQRKIEPPFEPPNIHGPGDTSNFDDYEEED 338 (355)
T ss_pred cHHHHhhccccCCCCCccccCCccccccccccccc
Confidence 999995 68999987 888999999999887665
No 4
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.5e-70 Score=535.07 Aligned_cols=406 Identities=45% Similarity=0.762 Sum_probs=357.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCeeEeceeccCC
Q 012988 19 VAAAKQFIENHYRAQMKNIQERKERRWVLERKLASSDVPMEEQINLIKDLERKETEFMRLKRHKICVDDFELLTIIGRGA 98 (452)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~i~~~LG~G~ 98 (452)
=.+.|=|.|+++.+.++..|+|..|+..+++++....++...+.+..+-+..+|.+|.++++-++...-|..++.||-|+
T Consensus 562 PqafkFfMEQHVEnvlksyqqr~~Rk~QLEkEM~kagLpd~~q~qMrkmL~QKESnYiRLkRaKMdKSmFvkik~iGvGA 641 (1034)
T KOG0608|consen 562 PQAFKFFMEQHVENVLKSYQQREKRKKQLEKEMVKAGLPDIMQNQMRKMLQQKESNYIRLKRAKMDKSMFVKIKTIGVGA 641 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhhHHHHHHhhccccceEEEeeecccc
Confidence 34556788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeecCCCChHHHHH
Q 012988 99 FGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDMMTLLM 178 (452)
Q Consensus 99 ~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~ 178 (452)
||+|.+++...|...||+|.+.|..+..++++.+++.|.+||...+++.||+||+.|+|.+++|+||+|++||++..+|.
T Consensus 642 FGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLI 721 (1034)
T KOG0608|consen 642 FGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLI 721 (1034)
T ss_pred cceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccccccCccccCCC
Q 012988 179 REDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEP 258 (452)
Q Consensus 179 ~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (452)
+-+.|+|+.+++|++++.+|+++.|..|+|||||||+|||||.+|||||+|||||.-+.-....... .-.+....++
T Consensus 722 rmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYY---q~gdH~RqDS 798 (1034)
T KOG0608|consen 722 RMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY---QEGDHHRQDS 798 (1034)
T ss_pred HhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceeccccccc---cCCCcccccc
Confidence 9999999999999999999999999999999999999999999999999999999766432211110 0111122222
Q ss_pred CCCCCCCCCCCCCCCCCCchhHHHH--hhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhhCCCCCC
Q 012988 259 MDIDGCFPDTDNKSSWKSPHEQLQH--WQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFY 336 (452)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~ 336 (452)
|+......+.+.. ...+.. ....++..+...+||+.|+|||++...+|+..+||||.|||||||+.|++||.
T Consensus 799 mep~~e~~d~~~~------lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~ 872 (1034)
T KOG0608|consen 799 MEPSPEWADISKC------LKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFL 872 (1034)
T ss_pred CCCchhhcccccc------chHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCcc
Confidence 2222111111111 111111 12334566778999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhcCccccCCCCCHHHHhcCCCcCCCCccccccCCCCccccCCC
Q 012988 337 ADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLCDVEHRLGTGGAHQIKAHPWFKDVVWDKLYEMEAAFKPEING 416 (452)
Q Consensus 337 ~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~dp~~R~~~~~~~eil~hp~f~~~~~~~l~~~~~~~~p~~~~ 416 (452)
...+-++..+|.+|...+.+|....+|.++.+||.+|.++++.|+|..++++|+.||||++|||..+++..++|+|.|..
T Consensus 873 ~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~sad~RLGkng~d~vKaHpfFkgIDfsslRkq~ApYIP~ItH 952 (1034)
T KOG0608|consen 873 ADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCCSADSRLGKNGADQVKAHPFFKGIDFSSLRKQRAPYIPRITH 952 (1034)
T ss_pred CCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhcChhhhhcccchhhhhcCccccccchHhhhhccCCcCccccC
Confidence 99999999999999999999999999999999999998899999999899999999999999999999999999999999
Q ss_pred CccCCCCCCCCCCCCCC
Q 012988 417 ELDTQNFMKFDELDPPA 433 (452)
Q Consensus 417 ~~~~~~~~~~~~~~~~~ 433 (452)
+.|++||+.++....-.
T Consensus 953 ptDTSNFdpvdpeklwn 969 (1034)
T KOG0608|consen 953 PTDTSNFDPVDPEKLWN 969 (1034)
T ss_pred CCccccCCcCCcccccc
Confidence 99999999998865433
No 5
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-69 Score=532.36 Aligned_cols=302 Identities=40% Similarity=0.737 Sum_probs=279.8
Q ss_pred CCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhC-CCceeeEEEEEEcCC
Q 012988 81 HKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVA-SHCIVKLYYSFQDTE 159 (452)
Q Consensus 81 ~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~~~~ 159 (452)
..+..++|.++++||+|+||+|++|..+.+++.||||+++|..+..++.++..+.|..|+.... ||+++.++.+|++.+
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~ 442 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE 442 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC
Confidence 4778899999999999999999999999999999999999999999999999999999999885 999999999999999
Q ss_pred eEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 160 YLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
++|+||||+.||++. +++..+.|++..+++|+++++.||.|||++||||||||.+|||+|.+|++||+|||+++..-
T Consensus 443 ~l~fvmey~~Ggdm~-~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m-- 519 (694)
T KOG0694|consen 443 HLFFVMEYVAGGDLM-HHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM-- 519 (694)
T ss_pred eEEEEEEecCCCcEE-EEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccC--
Confidence 999999999999944 44456889999999999999999999999999999999999999999999999999999642
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhh
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWW 319 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Diw 319 (452)
.....+.++||||.|||||++.+..|+.++|||
T Consensus 520 -----------------------------------------------~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW 552 (694)
T KOG0694|consen 520 -----------------------------------------------GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWW 552 (694)
T ss_pred -----------------------------------------------CCCCccccccCChhhcChhhhccCcccchhhHH
Confidence 112346689999999999999999999999999
Q ss_pred hhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCC--CCHHHHhcCCCcC
Q 012988 320 SLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGT--GGAHQIKAHPWFK 396 (452)
Q Consensus 320 SlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~--~~~~eil~hp~f~ 396 (452)
||||+|||||.|..||.+++..+.+..|+. ....+|. .+|.++.+++++||. +|++|+|. .++.+|+.||||+
T Consensus 553 ~lGVLlyeML~Gq~PF~gddEee~FdsI~~--d~~~yP~--~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr 628 (694)
T KOG0694|consen 553 GLGVLLYEMLVGESPFPGDDEEEVFDSIVN--DEVRYPR--FLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFR 628 (694)
T ss_pred HHHHHHHHHHcCCCCCCCCCHHHHHHHHhc--CCCCCCC--cccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccc
Confidence 999999999999999999999999999997 6677776 799999999999998 99999997 3799999999999
Q ss_pred CCCccccc--cCCCCccccCCCCccCCCCCCCCCCCCCCCCC
Q 012988 397 DVVWDKLY--EMEAAFKPEINGELDTQNFMKFDELDPPASGR 436 (452)
Q Consensus 397 ~~~~~~l~--~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 436 (452)
.|+|+.|. +++|||+|.++++.|.+||+.....+.|+.++
T Consensus 629 ~i~w~~L~~r~i~PPf~P~i~~~~D~snFd~eFt~e~p~Lt~ 670 (694)
T KOG0694|consen 629 SIDWDDLLNRRIKPPFVPTIKGPEDVSNFDEEFTSEKPALTP 670 (694)
T ss_pred cCCHHHHhhccCCCCCCcccCChhhhcccchhhhcCCCccCC
Confidence 99999995 69999999999999999999877777777776
No 6
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.5e-66 Score=487.55 Aligned_cols=338 Identities=33% Similarity=0.560 Sum_probs=274.7
Q ss_pred hcCCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC
Q 012988 79 KRHKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT 158 (452)
Q Consensus 79 ~~~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~ 158 (452)
+...+..++|++++.||.|.-|+||+|+.+.++..+|+|+|.+..+..+....+++.|.+||+.++||+++.||..|+.+
T Consensus 70 ~~~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~ 149 (459)
T KOG0610|consen 70 KDGSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETD 149 (459)
T ss_pred CCCccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeecc
Confidence 44667788999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred CeEEEEEeecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccC
Q 012988 159 EYLYLIMEYLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPL 236 (452)
Q Consensus 159 ~~~~lV~E~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~ 236 (452)
++.|+|||||+||+|..+++++ +.|++..+++|+++++.||+|||..|||+||||||||||.++|||.|+||.|+...
T Consensus 150 ~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 150 KYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRC 229 (459)
T ss_pred ceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccC
Confidence 9999999999999999999775 68999999999999999999999999999999999999999999999999999876
Q ss_pred CCCcchhhccccccCccccCCCC-CCCCCCCCCCCCC-C-----CCCchhHHHHh-hhhccccccccccCCccccchhcc
Q 012988 237 DCSTLYAIHEHKTIDDENMAEPM-DIDGCFPDTDNKS-S-----WKSPHEQLQHW-QMNRRKLAFSTVGTPDYIAPEVLL 308 (452)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~-----~~~~~~~~~~~-~~~~~~~~~~~~Gt~~y~APE~~~ 308 (452)
.-........... ......... -..+|+...-... . ........... .-.....+.+++||-.|+|||++.
T Consensus 230 ~~~Pt~~~s~~~~-~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~ 308 (459)
T KOG0610|consen 230 PVSPTLVKSSSPR-SSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIR 308 (459)
T ss_pred CCCCeeeccCCCC-CCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeee
Confidence 3211111000000 000000000 0012221110000 0 00000000000 011234567899999999999999
Q ss_pred CCCCCccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC-CH
Q 012988 309 KKGYGMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG-GA 386 (452)
Q Consensus 309 ~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~-~~ 386 (452)
+.+++.++|||+|||++||||.|..||.|.+..+++.+|+. ..+.||..+.++..++|||++||. ||.+|+|.. +|
T Consensus 309 G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~--~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA 386 (459)
T KOG0610|consen 309 GEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVG--QPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGA 386 (459)
T ss_pred cCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhc--CCCcCCCCCcchhHHHHHHHHHhccChhhhhccccch
Confidence 99999999999999999999999999999999999999997 788999888899999999999998 999999853 89
Q ss_pred HHHhcCCCcCCCCccccccCCCCccccCCCCcc
Q 012988 387 HQIKAHPWFKDVVWDKLYEMEAAFKPEINGELD 419 (452)
Q Consensus 387 ~eil~hp~f~~~~~~~l~~~~~~~~p~~~~~~~ 419 (452)
.||++||||++|+|+-++-..||++|...+...
T Consensus 387 ~eIK~HpFF~gVnWaLir~~~PP~iP~~~d~~~ 419 (459)
T KOG0610|consen 387 AEIKRHPFFEGVNWALIRCARPPEIPKPVDGGL 419 (459)
T ss_pred HHhhcCccccCCChhheeccCCCcCCCccccCc
Confidence 999999999999999667789999998765443
No 7
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-65 Score=492.93 Aligned_cols=285 Identities=40% Similarity=0.718 Sum_probs=256.7
Q ss_pred CCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEEcCCe
Q 012988 82 KICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQDTEY 160 (452)
Q Consensus 82 ~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~~ 160 (452)
.....||.+++.||.|+|++|++|+++.+++.|||||+.|..+.+...+.-+..|.++|..| .||.|++||..|+|+..
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 55678999999999999999999999999999999999999999988889999999999999 89999999999999999
Q ss_pred EEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCc
Q 012988 161 LYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCST 240 (452)
Q Consensus 161 ~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~ 240 (452)
+|+|+||+++|+|.++|.+.+.|++..+++|++||+.||+|||++|||||||||||||+|.||++||+|||.|+.++...
T Consensus 149 LYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~ 228 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQ 228 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999886543
Q ss_pred chhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhh
Q 012988 241 LYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWS 320 (452)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwS 320 (452)
....+.. .. . .......+++||-.|.+||++.....++.+|||+
T Consensus 229 ~~~~~~~---------~~----------~-----------------~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWA 272 (604)
T KOG0592|consen 229 KSQENPV---------DP----------N-----------------QASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWA 272 (604)
T ss_pred ccccCcc---------Cc----------c-----------------cccCcccceeeeecccCHHHhcCCCCCcccchHH
Confidence 2211000 00 0 0011134789999999999999999999999999
Q ss_pred hhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCCC
Q 012988 321 LGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDVV 399 (452)
Q Consensus 321 lGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~~ 399 (452)
||||||+|+.|.+||.+.++..++++|+. ....||. .+++.++|||+++|. ||.+|+ ++.+|++||||.+|+
T Consensus 273 lGCilyQmlaG~PPFra~NeyliFqkI~~--l~y~fp~--~fp~~a~dLv~KLLv~dp~~Rl---t~~qIk~HpFF~~Vd 345 (604)
T KOG0592|consen 273 LGCILYQMLAGQPPFRAANEYLIFQKIQA--LDYEFPE--GFPEDARDLIKKLLVRDPSDRL---TSQQIKAHPFFEGVD 345 (604)
T ss_pred HHHHHHHHhcCCCCCccccHHHHHHHHHH--hcccCCC--CCCHHHHHHHHHHHccCccccc---cHHHHhhCcccccCC
Confidence 99999999999999999999999999987 4455665 789999999999998 999999 899999999999999
Q ss_pred ccccccCCCC
Q 012988 400 WDKLYEMEAA 409 (452)
Q Consensus 400 ~~~l~~~~~~ 409 (452)
|++|.+..||
T Consensus 346 w~nlw~~~PP 355 (604)
T KOG0592|consen 346 WENLWQQTPP 355 (604)
T ss_pred hhhhhhcCCC
Confidence 9999876654
No 8
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-65 Score=528.34 Aligned_cols=302 Identities=52% Similarity=0.917 Sum_probs=281.9
Q ss_pred HhhhhcCCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEE
Q 012988 75 FMRLKRHKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYS 154 (452)
Q Consensus 75 ~~~~~~~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~ 154 (452)
...++...+..+||.|+++||+|+||.|.+++++.|++.||+|+++|-.+.++.....|..|.+||..-+.+.|+.+++.
T Consensus 64 v~~v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyA 143 (1317)
T KOG0612|consen 64 VKKVKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYA 143 (1317)
T ss_pred HHHHHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHH
Confidence 34455667888999999999999999999999999999999999999888888888999999999999999999999999
Q ss_pred EEcCCeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCc
Q 012988 155 FQDTEYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCK 234 (452)
Q Consensus 155 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~ 234 (452)
|+|+.++|+||||++||+|..++.+..+++++.+++|+++|+.||+.||+.|+|||||||+|||||..||+||+|||.|-
T Consensus 144 FQD~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsCl 223 (1317)
T KOG0612|consen 144 FQDERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCL 223 (1317)
T ss_pred hcCccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHH
Confidence 99999999999999999999999998899999999999999999999999999999999999999999999999999988
Q ss_pred cCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhcc----C-
Q 012988 235 PLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLL----K- 309 (452)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~----~- 309 (452)
.++.. | ...+...+|||.|.+||++. +
T Consensus 224 km~~d-----------------------G-------------------------~V~s~~aVGTPDYISPEvLqs~~~~~ 255 (1317)
T KOG0612|consen 224 KMDAD-----------------------G-------------------------TVRSSVAVGTPDYISPEVLQSQGDGK 255 (1317)
T ss_pred hcCCC-----------------------C-------------------------cEEeccccCCCCccCHHHHHhhcCCc
Confidence 76421 1 12234678999999999997 2
Q ss_pred CCCCccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhcCccccCCCCCHHHH
Q 012988 310 KGYGMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLCDVEHRLGTGGAHQI 389 (452)
Q Consensus 310 ~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~dp~~R~~~~~~~ei 389 (452)
+.|+..+||||+||++|||+.|..||+.++-.+++.+|++-+..+.||....+|.+++|||.++|++|+.|+|+++++++
T Consensus 256 g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~~~e~RLgrngiedi 335 (1317)
T KOG0612|consen 256 GEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLCDREVRLGRNGIEDI 335 (1317)
T ss_pred cccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhcChhhhcccccHHHH
Confidence 56899999999999999999999999999999999999998889999977789999999999999999999999999999
Q ss_pred hcCCCcCCCCccccccCCCCccccCCCCccCCCCC
Q 012988 390 KAHPWFKDVVWDKLYEMEAAFKPEINGELDTQNFM 424 (452)
Q Consensus 390 l~hp~f~~~~~~~l~~~~~~~~p~~~~~~~~~~~~ 424 (452)
..||||.+++|+++++..|||+|.+.++.|++||+
T Consensus 336 k~HpFF~g~~W~~iR~~~pP~vPevssd~DTsnFd 370 (1317)
T KOG0612|consen 336 KNHPFFEGIDWDNIRESVPPVVPEVSSDDDTSNFD 370 (1317)
T ss_pred HhCccccCCChhhhhhcCCCCCCcCCCCCcccccc
Confidence 99999999999999999999999999999999994
No 9
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-64 Score=461.04 Aligned_cols=300 Identities=42% Similarity=0.770 Sum_probs=278.5
Q ss_pred hcCCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC
Q 012988 79 KRHKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT 158 (452)
Q Consensus 79 ~~~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~ 158 (452)
.+.++..++|..+++||+|+||+|-+++.+.+++.||||++++..+..++.+.+-..|-.+|+..+||++..+-++|+..
T Consensus 161 ~~~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~ 240 (516)
T KOG0690|consen 161 RKNKVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQ 240 (516)
T ss_pred ccceeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccC
Confidence 34567889999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred CeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCC
Q 012988 159 EYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDC 238 (452)
Q Consensus 159 ~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~ 238 (452)
+.+|+||||+.||.|.-+|.+...|++..+++|.++|++||.|||+++||+||||.+|+|+|.|||+||+||||++.--.
T Consensus 241 drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~ 320 (516)
T KOG0690|consen 241 DRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK 320 (516)
T ss_pred ceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999985310
Q ss_pred CcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchh
Q 012988 239 STLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDW 318 (452)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Di 318 (452)
-...+.++||||.|+|||++....|+.++||
T Consensus 321 -------------------------------------------------~g~t~kTFCGTPEYLAPEVleDnDYgraVDW 351 (516)
T KOG0690|consen 321 -------------------------------------------------YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDW 351 (516)
T ss_pred -------------------------------------------------ccceeccccCChhhcCchhhccccccceeeh
Confidence 1223558999999999999999999999999
Q ss_pred hhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC--CHHHHhcCCCc
Q 012988 319 WSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG--GAHQIKAHPWF 395 (452)
Q Consensus 319 wSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~--~~~eil~hp~f 395 (452)
|.+||++|||++|+.||+..+....+.-|+. ..+.||. .++++++.|+..||. ||.+|+|.+ ++.||..|+||
T Consensus 352 WG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~--ed~kFPr--~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF 427 (516)
T KOG0690|consen 352 WGVGVVMYEMMCGRLPFYNKDHEKLFELILM--EDLKFPR--TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFF 427 (516)
T ss_pred hhhhHHHHHHHhccCcccccchhHHHHHHHh--hhccCCc--cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhh
Confidence 9999999999999999999999999988886 6788887 799999999999998 999999975 79999999999
Q ss_pred CCCCccccc--cCCCCccccCCCCccCCCCCCCCCCCC
Q 012988 396 KDVVWDKLY--EMEAAFKPEINGELDTQNFMKFDELDP 431 (452)
Q Consensus 396 ~~~~~~~l~--~~~~~~~p~~~~~~~~~~~~~~~~~~~ 431 (452)
.+|+|+.+. +++|||+|.+.++.|+++|++.....+
T Consensus 428 ~~v~W~~~~~Kki~PPfKPqVtSetDTryFD~EFT~q~ 465 (516)
T KOG0690|consen 428 ASVDWEATYRKKIEPPFKPQVTSETDTRYFDEEFTSQP 465 (516)
T ss_pred ccCCHHHHHHhccCCCCCCCcccccchhhhhhhhhcce
Confidence 999999985 699999999999999999997554443
No 10
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7e-64 Score=470.37 Aligned_cols=266 Identities=33% Similarity=0.563 Sum_probs=237.1
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcc----cchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVK----RGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE 159 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~ 159 (452)
..+.|.+.+.||+|+||.|-+|..+.||+.||||++.+..... ......+.+|++||+.|+|||||+++++|...+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 4577999999999999999999999999999999998865543 224456789999999999999999999999999
Q ss_pred eEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCC---CcEEEeeccCCccC
Q 012988 160 YLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKN---GHMKLSDFGLCKPL 236 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~---g~ikl~DFGla~~~ 236 (452)
+.||||||+.||+|.+.+-.++.+.+...+.+++|++.||.|||++||+||||||+|||+..+ ..+||+|||+|+..
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~ 329 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVS 329 (475)
T ss_pred ceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhcc
Confidence 999999999999999999999999999999999999999999999999999999999999876 68999999999976
Q ss_pred CCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCC---C
Q 012988 237 DCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGY---G 313 (452)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~---~ 313 (452)
+.. ..+.+.||||.|.|||++.+.++ .
T Consensus 330 g~~--------------------------------------------------sfm~TlCGTpsYvAPEVl~~kg~~~~~ 359 (475)
T KOG0615|consen 330 GEG--------------------------------------------------SFMKTLCGTPSYVAPEVLASKGVEYYP 359 (475)
T ss_pred ccc--------------------------------------------------eehhhhcCCccccChhheecCCeeccc
Confidence 422 23458899999999999997664 4
Q ss_pred ccchhhhhhHHHHHhhhCCCCCCCCChHH-HHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 314 MECDWWSLGAIMYEMLVGYPPFYADDPIT-TCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 314 ~~~DiwSlGvil~elltG~~Pf~~~~~~~-~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
.++|+|||||+||-+|+|.+||.+..... ...+|..++-.+.-+.|..+|.++.+||.+||. ||++|+ ++.|+|+
T Consensus 360 ~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~---s~~eaL~ 436 (475)
T KOG0615|consen 360 SKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRP---SADEALN 436 (475)
T ss_pred chheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCc---CHHHHhc
Confidence 58899999999999999999998765544 778888877676667778899999999999999 999999 9999999
Q ss_pred CCCcCCCCccc
Q 012988 392 HPWFKDVVWDK 402 (452)
Q Consensus 392 hp~f~~~~~~~ 402 (452)
||||+.++-..
T Consensus 437 hpW~~~~~~~s 447 (475)
T KOG0615|consen 437 HPWFKDAPCLS 447 (475)
T ss_pred Chhhhcccccc
Confidence 99999876433
No 11
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.8e-61 Score=473.09 Aligned_cols=255 Identities=37% Similarity=0.612 Sum_probs=240.8
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
.+|...+.||+|||++||.+++..+|+.||+|++.+..+.+..+.+.+.+|++|.+.|+|||||+++++|+|.+++|||+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
|+|..++|..++++.+.++|.++++|++||+.||.|||+++|||||||..|+|++++.++||+|||||..+...
T Consensus 98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~------ 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD------ 171 (592)
T ss_pred EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCc------
Confidence 99999999999999999999999999999999999999999999999999999999999999999999877422
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 325 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil 325 (452)
.....+.||||.|.|||++...+++..+||||+||+|
T Consensus 172 -------------------------------------------~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvm 208 (592)
T KOG0575|consen 172 -------------------------------------------GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVM 208 (592)
T ss_pred -------------------------------------------ccccceecCCCcccChhHhccCCCCCchhhhhhhhHH
Confidence 1223478999999999999999999999999999999
Q ss_pred HHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcC
Q 012988 326 YEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFK 396 (452)
Q Consensus 326 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~ 396 (452)
|.||+|++||...+-.+++.+|.. .+..+|. .+|.+|+|||.+||. ||.+|| ++.+|+.|+||.
T Consensus 209 YtLL~G~PPFetk~vkety~~Ik~--~~Y~~P~--~ls~~A~dLI~~lL~~~P~~Rp---sl~~vL~h~Ff~ 273 (592)
T KOG0575|consen 209 YTLLVGRPPFETKTVKETYNKIKL--NEYSMPS--HLSAEAKDLIRKLLRPNPSERP---SLDEVLDHPFFK 273 (592)
T ss_pred HhhhhCCCCcccchHHHHHHHHHh--cCccccc--ccCHHHHHHHHHHhcCCcccCC---CHHHHhcCHhhh
Confidence 999999999999999999999987 5566776 799999999999999 999999 999999999993
No 12
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-61 Score=462.03 Aligned_cols=297 Identities=37% Similarity=0.720 Sum_probs=280.6
Q ss_pred CCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeE
Q 012988 82 KICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYL 161 (452)
Q Consensus 82 ~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~ 161 (452)
.+.+.+++++..||-||||.|-++........+|+|+++|..+....+.+++..|.+||..+++|+||+||..|.+..++
T Consensus 416 ~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyv 495 (732)
T KOG0614|consen 416 QVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYV 495 (732)
T ss_pred ccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhh
Confidence 45567899999999999999999988777667999999999999999999999999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 162 YLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
||+||-|-||.|+..|..++.|++..+++|+..++.|++|||++|||+|||||+|.|++.+|.+||.|||+|+.+..
T Consensus 496 YmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~--- 572 (732)
T KOG0614|consen 496 YMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS--- 572 (732)
T ss_pred hhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhcc---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998753
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSL 321 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSl 321 (452)
...++++||||.|.|||++.+.+++.++|+|||
T Consensus 573 -----------------------------------------------g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaL 605 (732)
T KOG0614|consen 573 -----------------------------------------------GRKTWTFCGTPEYVAPEIILNKGHDRAVDYWAL 605 (732)
T ss_pred -----------------------------------------------CCceeeecCCcccccchhhhccCcchhhHHHHH
Confidence 245679999999999999999999999999999
Q ss_pred hHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCC--CCCHHHHhcCCCcCCC
Q 012988 322 GAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLG--TGGAHQIKAHPWFKDV 398 (452)
Q Consensus 322 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~--~~~~~eil~hp~f~~~ 398 (452)
|+++||||+|.+||.+.++..++..|+.+...+.+|. .++..+.+||++|.. +|.+|+| .+++.+|.+|.||.++
T Consensus 606 GIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr--~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gf 683 (732)
T KOG0614|consen 606 GILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPR--RITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGF 683 (732)
T ss_pred HHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhccc--ccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcC
Confidence 9999999999999999999999999999988888985 799999999999998 9999999 5699999999999999
Q ss_pred Cccccc--cCCCCccccCCCCccCCCCCCCCCCC
Q 012988 399 VWDKLY--EMEAAFKPEINGELDTQNFMKFDELD 430 (452)
Q Consensus 399 ~~~~l~--~~~~~~~p~~~~~~~~~~~~~~~~~~ 430 (452)
||+.|. .++||++|.+.++.|++||++|....
T Consensus 684 dweglr~~~L~pPi~~~va~ptD~s~Fd~~p~dn 717 (732)
T KOG0614|consen 684 DWEGLRSRTLPPPIIPSVANPTDVSNFDNFPPDN 717 (732)
T ss_pred ChhhhhhccCCCCccccCCCcccchhccCCCccc
Confidence 999996 59999999999999999999987654
No 13
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=7.9e-58 Score=455.04 Aligned_cols=331 Identities=53% Similarity=0.967 Sum_probs=270.0
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++++.||+|+||+||+|.++.+++.||+|++.+...........+.+|+.++..++||||+++++++.+...+|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 57999999999999999999999999999999998766555556677889999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
||++||+|.+++.+.+.+++..++.++.|++.||+|||++||+||||||+|||++.+|++||+|||+++.+.........
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~ 160 (363)
T cd05628 81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFY 160 (363)
T ss_pred cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccccc
Confidence 99999999999988889999999999999999999999999999999999999999999999999999865422110000
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 325 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil 325 (452)
.. .....+.+..+.. .........+..+........+||+.|+|||++.+..++.++|||||||++
T Consensus 161 ~~-------~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil 226 (363)
T cd05628 161 RN-------LNHSLPSDFTFQN-------MNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (363)
T ss_pred cc-------ccccccccccccc-------cccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHH
Confidence 00 0000000000000 000000011111222233467899999999999999999999999999999
Q ss_pred HHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhcCccccCCCCCHHHHhcCCCcCCCCcccccc
Q 012988 326 YEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLCDVEHRLGTGGAHQIKAHPWFKDVVWDKLYE 405 (452)
Q Consensus 326 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~dp~~R~~~~~~~eil~hp~f~~~~~~~l~~ 405 (452)
|||++|..||.+.+....+.++..+...+.+|....+++++++||.+|+++|.+|+++.++.+|++||||++++|+.+.+
T Consensus 227 ~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~hp~f~~~~~~~~~~ 306 (363)
T cd05628 227 YEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTNPFFEGVDWEHIRE 306 (363)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCCCCCCCCCHHHHHh
Confidence 99999999999999989999998877777888766789999999999988888887766999999999999999999987
Q ss_pred CCCCccccCCCCccCCCCCCCCCCC
Q 012988 406 MEAAFKPEINGELDTQNFMKFDELD 430 (452)
Q Consensus 406 ~~~~~~p~~~~~~~~~~~~~~~~~~ 430 (452)
.+++..+.+....+.++|+.+...+
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (363)
T cd05628 307 RPAAIPIEIKSIDDTSNFDEFPDSD 331 (363)
T ss_pred CCCCCCccCCCcchhhccCCCCccc
Confidence 6666667777888889998876544
No 14
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=9.4e-58 Score=454.73 Aligned_cols=338 Identities=60% Similarity=1.033 Sum_probs=276.8
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++++.||+|+||+||+|++..+|+.||||++.+...........+.+|+.+++.++||||++++++|.+.+.+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47999999999999999999999999999999998765555556677889999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
||++||+|.+++...+.+++..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+++.+.........
T Consensus 81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 160 (364)
T cd05599 81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFY 160 (364)
T ss_pred CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccccc
Confidence 99999999999988889999999999999999999999999999999999999999999999999999865422111000
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 325 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil 325 (452)
.. ...... ...+. ..............|...+.....+.+||+.|+|||++.+..++.++|||||||++
T Consensus 161 ~~-------~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il 229 (364)
T cd05599 161 RI-------LSHALP--SNFLD--FISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIM 229 (364)
T ss_pred cc-------cccccc--ccccc--cccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHH
Confidence 00 000000 00000 00000011111112222233334467899999999999999999999999999999
Q ss_pred HHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhcCccccCCCCCHHHHhcCCCcCCCCcccccc
Q 012988 326 YEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLCDVEHRLGTGGAHQIKAHPWFKDVVWDKLYE 405 (452)
Q Consensus 326 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~dp~~R~~~~~~~eil~hp~f~~~~~~~l~~ 405 (452)
|+|++|..||.+.+....+..+..+...+.+|....+++++++||.+||.+|.+|++..++.+++.||||++++|+.+..
T Consensus 230 ~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~~p~~R~~~~~~~~ll~h~~~~~~~~~~~~~ 309 (364)
T cd05599 230 YEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCCEAERRLGNNGVNEIKSHPFFKGVDWEHIRE 309 (364)
T ss_pred HHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHccCHhhcCCCCCHHHHhcCCCcCCCCHHHHhh
Confidence 99999999999999888888898888778888776789999999999999999999655699999999999999999988
Q ss_pred CCCCccccCCCCccCCCCCCCCCCCCCCC
Q 012988 406 MEAAFKPEINGELDTQNFMKFDELDPPAS 434 (452)
Q Consensus 406 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 434 (452)
..+++.|.+.+..|.++|+.++..+....
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (364)
T cd05599 310 RPAPIIPELKSITDTSNFDDFEEIDLDVP 338 (364)
T ss_pred cCCCCCCCCCCchhhhhcccccccccccc
Confidence 88999999999999999988776654333
No 15
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-60 Score=443.92 Aligned_cols=305 Identities=37% Similarity=0.696 Sum_probs=280.4
Q ss_pred CCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhC-CCceeeEEEEEEcCC
Q 012988 81 HKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVA-SHCIVKLYYSFQDTE 159 (452)
Q Consensus 81 ~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~~~~ 159 (452)
..+...+|..+.+||+|+||+|.+|..+.+.+.||||+++++.+...+.++--..|..+|.... -|+++++..+|++-+
T Consensus 344 d~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmD 423 (683)
T KOG0696|consen 344 DRIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMD 423 (683)
T ss_pred cceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhh
Confidence 3566789999999999999999999999999999999999999888888888888999998874 679999999999999
Q ss_pred eEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 160 YLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
.+|+||||+.||+|.-.++.-+.+.|..+.+|+++|+.||-|||++|||+||||.+|||+|.+||+||+|||+++.--.
T Consensus 424 RLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~- 502 (683)
T KOG0696|consen 424 RLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF- 502 (683)
T ss_pred heeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeeccccccccc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999985321
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhh
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWW 319 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Diw 319 (452)
....+.++||||.|+|||++..++|+.++|||
T Consensus 503 ------------------------------------------------~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWW 534 (683)
T KOG0696|consen 503 ------------------------------------------------DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWW 534 (683)
T ss_pred ------------------------------------------------CCcceeeecCCCcccccceEEecccccchhHH
Confidence 12345589999999999999999999999999
Q ss_pred hhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC--CHHHHhcCCCcC
Q 012988 320 SLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG--GAHQIKAHPWFK 396 (452)
Q Consensus 320 SlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~--~~~eil~hp~f~ 396 (452)
|+||+|||||.|++||.+.+..+.+..|.. ....+|. .+|.++.++++.+|. .|.+|+|.+ +-.+|..||||+
T Consensus 535 a~GVLLyEmlaGQpPFdGeDE~elF~aI~e--hnvsyPK--slSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR 610 (683)
T KOG0696|consen 535 AFGVLLYEMLAGQPPFDGEDEDELFQAIME--HNVSYPK--SLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFR 610 (683)
T ss_pred HHHHHHHHHHcCCCCCCCCCHHHHHHHHHH--ccCcCcc--cccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchh
Confidence 999999999999999999999999999987 5677886 799999999999998 999999975 678899999999
Q ss_pred CCCccccc--cCCCCccccCCCCccCCCCCCCCCCCCCCCCCCC
Q 012988 397 DVVWDKLY--EMEAAFKPEINGELDTQNFMKFDELDPPASGRTS 438 (452)
Q Consensus 397 ~~~~~~l~--~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (452)
.|+|+++. +++|||+|.++...+.+||+++...+++..++++
T Consensus 611 ~iDWek~E~~eiqPPfkPk~k~~r~~eNFD~~Ft~~~~~lTPpD 654 (683)
T KOG0696|consen 611 RIDWEKLERREIQPPFKPKIKCGRDAENFDKFFTREPTDLTPPD 654 (683)
T ss_pred hccHHHHhhccCCCCCCCccccCCchhhhhHHHhcCCCCCCCch
Confidence 99999995 7999999999999999999999888877777654
No 16
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-58 Score=431.09 Aligned_cols=260 Identities=31% Similarity=0.515 Sum_probs=232.8
Q ss_pred CCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCe-
Q 012988 82 KICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEY- 160 (452)
Q Consensus 82 ~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~- 160 (452)
.+..++.+.++.||+|..|+||+|+++.|++.||+|++... ......+.+.+|++|++..+||+||++|+.|.+++.
T Consensus 75 ~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~--~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~ 152 (364)
T KOG0581|consen 75 GISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN--IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEE 152 (364)
T ss_pred ccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc--CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCce
Confidence 35567889999999999999999999999999999999432 244456778999999999999999999999999994
Q ss_pred EEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 161 LYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHK-HNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 161 ~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~-~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
++|+||||+||||.+++...+.++|.....++.+++.||.|||. .+||||||||+|||+++.|.+||||||.++.+.++
T Consensus 153 isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS 232 (364)
T KOG0581|consen 153 ISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS 232 (364)
T ss_pred EEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh
Confidence 99999999999999999888999999999999999999999996 89999999999999999999999999999876422
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhh
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWW 319 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Diw 319 (452)
.+.+++||..|||||.+.+..|+.++|||
T Consensus 233 ---------------------------------------------------~a~tfvGT~~YMsPERi~g~~Ys~~sDIW 261 (364)
T KOG0581|consen 233 ---------------------------------------------------IANTFVGTSAYMSPERISGESYSVKSDIW 261 (364)
T ss_pred ---------------------------------------------------hcccccccccccChhhhcCCcCCccccee
Confidence 34578999999999999999999999999
Q ss_pred hhhHHHHHhhhCCCCCCCC-----ChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCC
Q 012988 320 SLGAIMYEMLVGYPPFYAD-----DPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHP 393 (452)
Q Consensus 320 SlGvil~elltG~~Pf~~~-----~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp 393 (452)
|||+.++|+.+|+.||... +..+.+..|.. ...+.+|.. .+|+++++||..||+ ||.+|+ ++.|+++||
T Consensus 262 SLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~-~ppP~lP~~-~fS~ef~~FV~~CL~Kdp~~R~---s~~qLl~Hp 336 (364)
T KOG0581|consen 262 SLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVD-EPPPRLPEG-EFSPEFRSFVSCCLRKDPSERP---SAKQLLQHP 336 (364)
T ss_pred cccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhc-CCCCCCCcc-cCCHHHHHHHHHHhcCCcccCC---CHHHHhcCH
Confidence 9999999999999999774 66677777775 245566653 599999999999999 999999 999999999
Q ss_pred CcCCCC
Q 012988 394 WFKDVV 399 (452)
Q Consensus 394 ~f~~~~ 399 (452)
|++...
T Consensus 337 fi~~~~ 342 (364)
T KOG0581|consen 337 FIKKFE 342 (364)
T ss_pred HHhhcc
Confidence 998644
No 17
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.8e-57 Score=452.49 Aligned_cols=343 Identities=52% Similarity=0.942 Sum_probs=272.3
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++++.||+|+||+||+|.++.+++.||||++.+...........+.+|+.+++.++||||++++++|.+..++|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 47999999999999999999999999999999998765555556677899999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
||++||+|.+++...+.+++..++.++.|++.||+|||++||+||||||+|||++.+|.+||+|||+++.+.........
T Consensus 81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 160 (377)
T cd05629 81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYY 160 (377)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence 99999999999988889999999999999999999999999999999999999999999999999999754321100000
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 325 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil 325 (452)
................... ..+..............|..+........+||+.|+|||++.+..++.++|||||||++
T Consensus 161 -~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 238 (377)
T cd05629 161 -QKLLQGKSNKNRIDNRNSV-AVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM 238 (377)
T ss_pred -ccccccccccccccccccc-ccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhh
Confidence 0000000000000000000 00000000111112222222222233456899999999999999999999999999999
Q ss_pred HHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhcCccccCCCCCHHHHhcCCCcCCCCcccccc
Q 012988 326 YEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLCDVEHRLGTGGAHQIKAHPWFKDVVWDKLYE 405 (452)
Q Consensus 326 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~dp~~R~~~~~~~eil~hp~f~~~~~~~l~~ 405 (452)
|||++|.+||.+.+....+..+..|...+.+|....++.++++||.+||++|.+|+++.++.+++.||||++++|+.+..
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~~~~~r~~r~~~~~~l~hp~~~~~~~~~~~~ 318 (377)
T cd05629 239 FECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLITNAENRLGRGGAHEIKSHPFFRGVDWDTIRQ 318 (377)
T ss_pred hhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhcCHhhcCCCCCHHHHhcCCCcCCCCHHHHcc
Confidence 99999999999988888888888887778888776789999999999999899988777999999999999999999999
Q ss_pred CCCCccccCCCCccCCCCCCCCCCC
Q 012988 406 MEAAFKPEINGELDTQNFMKFDELD 430 (452)
Q Consensus 406 ~~~~~~p~~~~~~~~~~~~~~~~~~ 430 (452)
..+|+.|.+....+..+|.......
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (377)
T cd05629 319 IRAPFIPQLKSITDTSYFPTDELEQ 343 (377)
T ss_pred CCCCcccCCCCccccccCCcccccc
Confidence 9999999998888888886655443
No 18
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-57 Score=427.22 Aligned_cols=259 Identities=34% Similarity=0.595 Sum_probs=233.9
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEE
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYL 163 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~l 163 (452)
..++|.+.+.||.|+||+||+|+++.++..||||.+.+..+ ....++.+..|+.||+.++|||||.+++++.+++++||
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~l 86 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYL 86 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEE
Confidence 46899999999999999999999999999999999987754 33456778899999999999999999999999999999
Q ss_pred EEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCC------CcEEEeeccCCccCC
Q 012988 164 IMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKN------GHMKLSDFGLCKPLD 237 (452)
Q Consensus 164 V~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~------g~ikl~DFGla~~~~ 237 (452)
|||||.||+|.+++++.+.+++..++.++.||+.||++||+++||||||||.||||+.. -.+||+|||+|+.+.
T Consensus 87 VMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~ 166 (429)
T KOG0595|consen 87 VMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQ 166 (429)
T ss_pred EEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCC
Confidence 99999999999999999999999999999999999999999999999999999999875 358999999999885
Q ss_pred CCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccch
Q 012988 238 CSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECD 317 (452)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~D 317 (452)
++ ....+.||+|.|||||++..+.|+.|+|
T Consensus 167 ~~--------------------------------------------------~~a~tlcGSplYMAPEV~~~~~YdAKAD 196 (429)
T KOG0595|consen 167 PG--------------------------------------------------SMAETLCGSPLYMAPEVIMSQQYDAKAD 196 (429)
T ss_pred ch--------------------------------------------------hHHHHhhCCccccCHHHHHhccccchhh
Confidence 32 2234789999999999999999999999
Q ss_pred hhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcC
Q 012988 318 WWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFK 396 (452)
Q Consensus 318 iwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~ 396 (452)
+||+|+|+|+|++|++||...+..+.+..+.......+.+. ..++....+|+..+|+ +|.+|. +..+-..|+|..
T Consensus 197 LWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~-~~~s~~~~~Ll~~ll~~~~~~~~---~~~~~~~~~~l~ 272 (429)
T KOG0595|consen 197 LWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLP-AELSNPLRELLISLLQRNPKDRI---SFEDFFDHPFLA 272 (429)
T ss_pred HHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchh-hhccCchhhhhhHHHhcCccccC---chHHhhhhhhcc
Confidence 99999999999999999999999999998877655555544 3678888899999998 999999 889999999986
Q ss_pred C
Q 012988 397 D 397 (452)
Q Consensus 397 ~ 397 (452)
.
T Consensus 273 ~ 273 (429)
T KOG0595|consen 273 A 273 (429)
T ss_pred c
Confidence 5
No 19
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.3e-56 Score=445.93 Aligned_cols=331 Identities=53% Similarity=0.953 Sum_probs=269.8
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++++.||+|+||+||+|.++.+++.||+|++.+...........+..|+.++..++||+|++++++|.+.+.+|+||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 57999999999999999999999999999999998765555566778899999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
||++||+|.+++.+.+.+++..++.++.|++.||+|||++||+||||||+|||++.+|++||+|||+++.+.........
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~ 160 (360)
T cd05627 81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFY 160 (360)
T ss_pred eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccc
Confidence 99999999999988889999999999999999999999999999999999999999999999999999865322110000
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 325 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil 325 (452)
... ... .+. +..............+..+........+||+.|+|||++.+..++.++|||||||++
T Consensus 161 ~~~-------~~~------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil 226 (360)
T cd05627 161 RNL-------THN------PPS-DFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (360)
T ss_pred ccc-------ccC------Ccc-cccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecccccee
Confidence 000 000 000 000000000000111112223334467899999999999999999999999999999
Q ss_pred HHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhcCccccCCCCCHHHHhcCCCcCCCCcccccc
Q 012988 326 YEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLCDVEHRLGTGGAHQIKAHPWFKDVVWDKLYE 405 (452)
Q Consensus 326 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~dp~~R~~~~~~~eil~hp~f~~~~~~~l~~ 405 (452)
|||++|+.||.+.+....+..+..+...+.+|....+++++++||.+|+.||.+|+++.++.++++||||++++|..+..
T Consensus 227 yel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~p~~R~~~~~~~ei~~hp~f~~~~~~~~~~ 306 (360)
T cd05627 227 YEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCTDSENRIGSNGVEEIKSHPFFEGVDWGHIRE 306 (360)
T ss_pred eecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhccChhhcCCCCCHHHHhcCCCCCCCCHHHHhc
Confidence 99999999999999988888888877777777766789999999999777999999877899999999999999999987
Q ss_pred CCCCccccCCCCccCCCCCCCCCCC
Q 012988 406 MEAAFKPEINGELDTQNFMKFDELD 430 (452)
Q Consensus 406 ~~~~~~p~~~~~~~~~~~~~~~~~~ 430 (452)
.+.+..+.+....|.++|..+....
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (360)
T cd05627 307 RPAAIPIEIKSIDDTSNFDEFPESD 331 (360)
T ss_pred CCCCCCccCCCcchhhhcCCCCccc
Confidence 6666666777888889998765443
No 20
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.9e-56 Score=448.25 Aligned_cols=339 Identities=47% Similarity=0.827 Sum_probs=268.5
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
+|++++.||+|+||+||+|+++.+++.||+|++.+...........+.+|+.+++.++||||++++++|.+.+.+|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 69999999999999999999999999999999987665555667789999999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcc
Q 012988 167 YLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHE 246 (452)
Q Consensus 167 ~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~ 246 (452)
||++|+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||++..+..........
T Consensus 82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~ 161 (382)
T cd05625 82 YIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ 161 (382)
T ss_pred CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccccc
Confidence 99999999999888889999999999999999999999999999999999999999999999999987543111000000
Q ss_pred ccccCccccCCCCCCCCCC--CCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHH
Q 012988 247 HKTIDDENMAEPMDIDGCF--PDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 324 (452)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvi 324 (452)
. .+............. +.............. ............+.+||+.|+|||++.+..|+.++|||||||+
T Consensus 162 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi 237 (382)
T cd05625 162 S---GDHVRQDSMDFSNEWGDPANCRCGDRLKPLER-RAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 237 (382)
T ss_pred c---ccccccccccccccccccccccccccccchhh-hhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHH
Confidence 0 000000000000000 000000000000000 0000011122345689999999999999999999999999999
Q ss_pred HHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhcCccccCCCCCHHHHhcCCCcCCCCcccc-
Q 012988 325 MYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLCDVEHRLGTGGAHQIKAHPWFKDVVWDKL- 403 (452)
Q Consensus 325 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~dp~~R~~~~~~~eil~hp~f~~~~~~~l- 403 (452)
+|||++|++||.+.++......+..+...+.+|....+++++.+||.+|+.+|.+|++..++.+++.||||++++|...
T Consensus 238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~p~~R~~~~~~~ei~~hp~f~~~~~~~~~ 317 (382)
T cd05625 238 LYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLCRGPEDRLGKNGADEIKAHPFFKTIDFSSDL 317 (382)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHccCHhHcCCCCCHHHHhcCCCcCCcChHHHH
Confidence 9999999999999988888888888777788887778999999999998779999997667999999999999999874
Q ss_pred ccCCCCccccCCCCccCCCCCCCCCC
Q 012988 404 YEMEAAFKPEINGELDTQNFMKFDEL 429 (452)
Q Consensus 404 ~~~~~~~~p~~~~~~~~~~~~~~~~~ 429 (452)
.+..+|+.|.+..+.|+++|+.++..
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (382)
T cd05625 318 RQQSAPYIPKITHPTDTSNFDPVDPD 343 (382)
T ss_pred hcCCCCccCcCCCcchhhhcCCCCcc
Confidence 56788999999999999999877643
No 21
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=4.2e-56 Score=445.41 Aligned_cols=339 Identities=47% Similarity=0.833 Sum_probs=262.7
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
.|++++.||+|+||+||+|.++.+++.||+|++.+...........+.+|+.+++.++||||+++++++.+.+++|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 69999999999999999999999999999999987766566667789999999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcc
Q 012988 167 YLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHE 246 (452)
Q Consensus 167 ~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~ 246 (452)
|++||+|.+++.+...+++..++.++.||+.||.|||+.||+||||||+|||++.+|++||+|||+++.+..........
T Consensus 82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~ 161 (381)
T cd05626 82 YIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQ 161 (381)
T ss_pred cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccccc
Confidence 99999999999888899999999999999999999999999999999999999999999999999987543211100000
Q ss_pred c-cccCccccCCCCCCCCCCCCCCCCCCCCCchhHHH--HhhhhccccccccccCCccccchhccCCCCCccchhhhhhH
Q 012988 247 H-KTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQ--HWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 323 (452)
Q Consensus 247 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGv 323 (452)
. ....... +........ .............. ...........+.+||+.|+|||++.+..++.++|||||||
T Consensus 162 ~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~ 236 (381)
T cd05626 162 KGSHIRQDS----MEPSDLWDD-VSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV 236 (381)
T ss_pred ccccccccc----cCccccccc-ccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence 0 0000000 000000000 00000000000000 00000111234568999999999999999999999999999
Q ss_pred HHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhcCccccCCCCCHHHHhcCCCcCCCCcccc
Q 012988 324 IMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLCDVEHRLGTGGAHQIKAHPWFKDVVWDKL 403 (452)
Q Consensus 324 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~dp~~R~~~~~~~eil~hp~f~~~~~~~l 403 (452)
++|||++|..||...+.......+..+...+.+|....+++++.+||.+||+.+.+|.++.++.+++.||||.+++|...
T Consensus 237 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~~~~~~ 316 (381)
T cd05626 237 ILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEVDFSSD 316 (381)
T ss_pred HHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCCChhHH
Confidence 99999999999999888777778877777777887777999999999998863333322239999999999999999875
Q ss_pred -ccCCCCccccCCCCccCCCCCCCCCCC
Q 012988 404 -YEMEAAFKPEINGELDTQNFMKFDELD 430 (452)
Q Consensus 404 -~~~~~~~~p~~~~~~~~~~~~~~~~~~ 430 (452)
....+|+.|.+..+.+.++|+..+...
T Consensus 317 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 344 (381)
T cd05626 317 IRTQPAPYVPKISHPMDTSNFDPVEEES 344 (381)
T ss_pred hhcCCCCccCcCCCcchhhhcCCCCccc
Confidence 456788999999999999998766543
No 22
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=5.1e-56 Score=444.15 Aligned_cols=342 Identities=47% Similarity=0.838 Sum_probs=269.5
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++++.||+|+||+||+|++..+++.||+|++.+...........+.+|+.+|+.++||||+++++.|.+.+.+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999998765555556677889999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
||++||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|..+.........
T Consensus 81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~ 160 (376)
T cd05598 81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY 160 (376)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccc
Confidence 99999999999988888999999999999999999999999999999999999999999999999998654311100000
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 325 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil 325 (452)
.. ........+............ . ...... ..............+||+.|+|||++.+..++.++|||||||++
T Consensus 161 ~~---~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~-~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 234 (376)
T cd05598 161 QK---GDHHRQDSMEPSEEWSEIDRC-R-LKPLER-RRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 234 (376)
T ss_pred cc---ccccccccccccccccccccc-c-ccchhh-hhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeecccee
Confidence 00 000000000000000000000 0 000000 00000011122356899999999999999999999999999999
Q ss_pred HHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhcCccccCCCCCHHHHhcCCCcCCCCcccc-c
Q 012988 326 YEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLCDVEHRLGTGGAHQIKAHPWFKDVVWDKL-Y 404 (452)
Q Consensus 326 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~dp~~R~~~~~~~eil~hp~f~~~~~~~l-~ 404 (452)
|+|++|+.||.+.+.......+..|...+.+|....+++++.+||.+|+.+|.+|++..++.++++||||++++|..+ .
T Consensus 235 yell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~~~p~~R~~~~t~~ell~h~~~~~~~~~~~~~ 314 (376)
T cd05598 235 YEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLCCGAEDRLGKNGADEIKAHPFFKGIDFASLIR 314 (376)
T ss_pred eehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHhcCHhhcCCCCCHHHHhCCCCcCCCCHHHHhh
Confidence 999999999999988888888887777777777667999999999998779999998778999999999999999998 4
Q ss_pred cCCCCccccCCCCccCCCCCCCCCCCCCC
Q 012988 405 EMEAAFKPEINGELDTQNFMKFDELDPPA 433 (452)
Q Consensus 405 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 433 (452)
...+++.|.+..+.+.++|...+......
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (376)
T cd05598 315 RQKAPYIPKITHPTDTSNFDPVDPEKLRS 343 (376)
T ss_pred cCCCCCCCcCCCcchhhhcCCCCcccccc
Confidence 67788999999999999988776554433
No 23
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.6e-55 Score=432.63 Aligned_cols=292 Identities=42% Similarity=0.813 Sum_probs=258.4
Q ss_pred CCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCe
Q 012988 81 HKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEY 160 (452)
Q Consensus 81 ~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~ 160 (452)
.....++|++++.||+|+||+||+|+++.+++.||+|++.+...........+.+|+.+++.++||||+++++++.+.+.
T Consensus 13 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 92 (329)
T PTZ00263 13 SSWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENR 92 (329)
T ss_pred CCCCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCE
Confidence 34556899999999999999999999999999999999987655555556778999999999999999999999999999
Q ss_pred EEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCc
Q 012988 161 LYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCST 240 (452)
Q Consensus 161 ~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~ 240 (452)
+|+||||++||+|.+++...+.+++..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 93 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~- 171 (329)
T PTZ00263 93 VYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR- 171 (329)
T ss_pred EEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC-
Confidence 9999999999999999988889999999999999999999999999999999999999999999999999998764311
Q ss_pred chhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhh
Q 012988 241 LYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWS 320 (452)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwS 320 (452)
....+||+.|+|||++.+..++.++||||
T Consensus 172 ---------------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Diws 200 (329)
T PTZ00263 172 ---------------------------------------------------TFTLCGTPEYLAPEVIQSKGHGKAVDWWT 200 (329)
T ss_pred ---------------------------------------------------cceecCChhhcCHHHHcCCCCCCcceeec
Confidence 11357999999999999999999999999
Q ss_pred hhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCC--CCHHHHhcCCCcCC
Q 012988 321 LGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGT--GGAHQIKAHPWFKD 397 (452)
Q Consensus 321 lGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~--~~~~eil~hp~f~~ 397 (452)
|||++|+|++|..||.+.+....+..+.. ..+.+|. .++..+++||.+||. ||.+|++. .++.+++.||||++
T Consensus 201 lG~il~elltg~~pf~~~~~~~~~~~i~~--~~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~ 276 (329)
T PTZ00263 201 MGVLLYEFIAGYPPFFDDTPFRIYEKILA--GRLKFPN--WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHG 276 (329)
T ss_pred hHHHHHHHHcCCCCCCCCCHHHHHHHHhc--CCcCCCC--CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCC
Confidence 99999999999999999888888887765 3445554 588999999999999 99999964 35899999999999
Q ss_pred CCccccc--cCCCCccccCCCCccCCCCCCCCC
Q 012988 398 VVWDKLY--EMEAAFKPEINGELDTQNFMKFDE 428 (452)
Q Consensus 398 ~~~~~l~--~~~~~~~p~~~~~~~~~~~~~~~~ 428 (452)
++|..+. ...+|+.+.+....+..+|.++..
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (329)
T PTZ00263 277 ANWDKLYARYYPAPIPVRVKSPGDTSNFEKYPD 309 (329)
T ss_pred CCHHHHHhCCCCCCcCCCCCCcccchhccCCcc
Confidence 9999885 456777888888888888877643
No 24
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-57 Score=429.09 Aligned_cols=294 Identities=36% Similarity=0.665 Sum_probs=258.3
Q ss_pred cCCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC
Q 012988 80 RHKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE 159 (452)
Q Consensus 80 ~~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~ 159 (452)
...+..+.|..-++||+||||.||-++.+.||+.||+|.+.|..+.++.......+|..||..++.++||.|-+.|++.+
T Consensus 179 ~qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd 258 (591)
T KOG0986|consen 179 LQPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKD 258 (591)
T ss_pred hhhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCC
Confidence 35677889999999999999999999999999999999999888777777777889999999999999999999999999
Q ss_pred eEEEEEeecCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCC
Q 012988 160 YLYLIMEYLPGGDMMTLLMRED--TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLD 237 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~ 237 (452)
.+|+||..|+||+|.-+|...+ .|++..+++|+++|+.||++||+.+||+|||||+|||+|+.||+.|+|.|||..+.
T Consensus 259 ~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~ 338 (591)
T KOG0986|consen 259 ALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIP 338 (591)
T ss_pred ceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecC
Confidence 9999999999999999887654 89999999999999999999999999999999999999999999999999998775
Q ss_pred CCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccch
Q 012988 238 CSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECD 317 (452)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~D 317 (452)
.+. .-...+||.+|||||++.++.|+..+|
T Consensus 339 ~g~--------------------------------------------------~~~~rvGT~GYMAPEvl~ne~Y~~s~D 368 (591)
T KOG0986|consen 339 EGK--------------------------------------------------PIRGRVGTVGYMAPEVLQNEVYDFSPD 368 (591)
T ss_pred CCC--------------------------------------------------ccccccCcccccCHHHHcCCcccCCcc
Confidence 332 122458999999999999999999999
Q ss_pred hhhhhHHHHHhhhCCCCCCCCCh----HHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC--CHHHHh
Q 012988 318 WWSLGAIMYEMLVGYPPFYADDP----ITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG--GAHQIK 390 (452)
Q Consensus 318 iwSlGvil~elltG~~Pf~~~~~----~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~--~~~eil 390 (452)
||||||+||||+.|+.||..... ++.-+.+.. ....+|+ .+|+++++|.+.+|+ ||.+|+|.. +++++.
T Consensus 369 wf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~--~~~ey~~--kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk 444 (591)
T KOG0986|consen 369 WFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLE--DPEEYSD--KFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVK 444 (591)
T ss_pred HHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhc--chhhccc--ccCHHHHHHHHHHHccCHHHhccCCCcCcchhh
Confidence 99999999999999999975432 233344443 5556664 799999999999999 999999963 899999
Q ss_pred cCCCcCCCCccccc--cCCCCccccCC-----CCccCCCCCCCC
Q 012988 391 AHPWFKDVVWDKLY--EMEAAFKPEIN-----GELDTQNFMKFD 427 (452)
Q Consensus 391 ~hp~f~~~~~~~l~--~~~~~~~p~~~-----~~~~~~~~~~~~ 427 (452)
+||||+++||..+. .++|||+|... +..|+..|++..
T Consensus 445 ~HpfFk~lnw~rleagml~PPfiPdp~aVyakDv~DIeqFs~VK 488 (591)
T KOG0986|consen 445 EHPFFKDLNWRRLEAGMLEPPFIPDPGAVYAKDVLDIEQFSTVK 488 (591)
T ss_pred hCcccccCCHhHHhccCCCCCCCCCccccchhhhhhhhhccccc
Confidence 99999999999995 68999999774 456677776544
No 25
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-55 Score=433.88 Aligned_cols=259 Identities=36% Similarity=0.663 Sum_probs=233.5
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhccc--chHHHHHHHHHHHHHhC-CCceeeEEEEEEcCC
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKR--GQVEHVRAERNLLAEVA-SHCIVKLYYSFQDTE 159 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~--~~~~~~~~E~~il~~l~-hp~iv~l~~~~~~~~ 159 (452)
...+.|.+.+.||+|+||+|++|++..+|..||+|++.+...... ...+.+.+|+.+++.+. ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 456789999999999999999999999999999998876533212 34566778999999999 999999999999999
Q ss_pred eEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCC-CcEEEeeccCCccCCC
Q 012988 160 YLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKN-GHMKLSDFGLCKPLDC 238 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~-g~ikl~DFGla~~~~~ 238 (452)
.+|+|||||.||+|.+++...+++.|..++.++.|++.||+|+|++||+||||||||||++.+ +++||+|||++.....
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~ 173 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPG 173 (370)
T ss_pred eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCC
Confidence 999999999999999999999999999999999999999999999999999999999999999 9999999999986520
Q ss_pred CcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCC-C-Cccc
Q 012988 239 STLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKG-Y-GMEC 316 (452)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~-~-~~~~ 316 (452)
......+.|||+.|+|||++.+.. | +.++
T Consensus 174 -------------------------------------------------~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~a 204 (370)
T KOG0583|consen 174 -------------------------------------------------EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAA 204 (370)
T ss_pred -------------------------------------------------CCCcccCCCCCcccCCHHHhCCCCCcCCchh
Confidence 112334789999999999999987 8 5899
Q ss_pred hhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCC-ChhHHHHHHHhhc-CccccCCCCCHHHHhcCCC
Q 012988 317 DWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKL-SPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPW 394 (452)
Q Consensus 317 DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~-s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~ 394 (452)
||||+||+||.|++|+.||...+...++..|.. ..+.+|. .+ |+++++||.+||. ||..|+ ++.+|+.|||
T Consensus 205 DvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~--~~~~~p~--~~~S~~~~~Li~~mL~~~P~~R~---t~~~i~~h~w 277 (370)
T KOG0583|consen 205 DVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRK--GEFKIPS--YLLSPEARSLIEKMLVPDPSTRI---TLLEILEHPW 277 (370)
T ss_pred hhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhc--CCccCCC--CcCCHHHHHHHHHHcCCCcccCC---CHHHHhhChh
Confidence 999999999999999999999999899988775 6677776 46 9999999999999 999999 9999999999
Q ss_pred cCC
Q 012988 395 FKD 397 (452)
Q Consensus 395 f~~ 397 (452)
|+.
T Consensus 278 ~~~ 280 (370)
T KOG0583|consen 278 FQK 280 (370)
T ss_pred hcc
Confidence 995
No 26
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1e-54 Score=433.17 Aligned_cols=305 Identities=47% Similarity=0.897 Sum_probs=261.3
Q ss_pred hhhcCCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEE
Q 012988 77 RLKRHKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQ 156 (452)
Q Consensus 77 ~~~~~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~ 156 (452)
.++......++|++++.||+|+||.||+|.++.+++.||+|++.+...........+.+|+.+++.++||||+++++++.
T Consensus 34 ~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~ 113 (370)
T cd05621 34 KIRKLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQ 113 (370)
T ss_pred HHHhcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE
Confidence 34455667789999999999999999999999999999999998765544445566888999999999999999999999
Q ss_pred cCCeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccC
Q 012988 157 DTEYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPL 236 (452)
Q Consensus 157 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~ 236 (452)
+++.+|+||||++||+|.+++.. ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|..+
T Consensus 114 ~~~~~~lv~Ey~~gg~L~~~l~~-~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~ 192 (370)
T cd05621 114 DDKYLYMVMEYMPGGDLVNLMSN-YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKM 192 (370)
T ss_pred cCCEEEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceec
Confidence 99999999999999999999854 46899999999999999999999999999999999999999999999999998865
Q ss_pred CCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCC----C
Q 012988 237 DCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKG----Y 312 (452)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~----~ 312 (452)
..... ....+.+||+.|+|||++.+.+ +
T Consensus 193 ~~~~~------------------------------------------------~~~~~~~gt~~Y~aPE~~~~~~~~~~~ 224 (370)
T cd05621 193 DETGM------------------------------------------------VRCDTAVGTPDYISPEVLKSQGGDGYY 224 (370)
T ss_pred ccCCc------------------------------------------------eecccCCCCcccCCHHHHhccCCCCCC
Confidence 31100 0112457999999999997643 7
Q ss_pred CccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhcCccccCCCCCHHHHhcC
Q 012988 313 GMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLCDVEHRLGTGGAHQIKAH 392 (452)
Q Consensus 313 ~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~dp~~R~~~~~~~eil~h 392 (452)
+.++|||||||++|+|++|..||.+.+....+..+......+.+|....++..+++||.+||.++..|+++.++.++++|
T Consensus 225 ~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 225 GRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 88999999999999999999999999888888888876666777776678999999999999866666655599999999
Q ss_pred CCcCCCCc--cccccCCCCccccCCCCccCCCCCCCCCCC
Q 012988 393 PWFKDVVW--DKLYEMEAAFKPEINGELDTQNFMKFDELD 430 (452)
Q Consensus 393 p~f~~~~~--~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~ 430 (452)
|||+...| ..+....+|+.|.+....+..+|+......
T Consensus 305 p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 344 (370)
T cd05621 305 PFFKNDQWNWDNIRETAAPVVPELSSDIDSSNFDDIEDDK 344 (370)
T ss_pred cccCCCCcChHhcCCCCCCcCCCCCCcchhhhcCCccccc
Confidence 99998655 455567889999999999999998665443
No 27
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=5.6e-55 Score=430.30 Aligned_cols=295 Identities=41% Similarity=0.803 Sum_probs=259.9
Q ss_pred cCCCCCCCeeEeceeccCCCeEEEEEEEccCC-CEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC
Q 012988 80 RHKICVDDFELLTIIGRGAFGEVRLCREKKSG-NIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT 158 (452)
Q Consensus 80 ~~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~ 158 (452)
...+..++|++++.||+|+||.||+|.++.++ ..||+|++.+...........+.+|+.+++.++||||+++++++.+.
T Consensus 24 ~~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~ 103 (340)
T PTZ00426 24 KNKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDE 103 (340)
T ss_pred CCCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeC
Confidence 45567789999999999999999999876655 68999999876555555667788999999999999999999999999
Q ss_pred CeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCC
Q 012988 159 EYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDC 238 (452)
Q Consensus 159 ~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~ 238 (452)
+.+|+||||+++|+|.+++.....+++..++.++.|++.||.|||++||+||||||+|||++.+|++||+|||+++.+..
T Consensus 104 ~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 104 SYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 99999999999999999998888999999999999999999999999999999999999999999999999999875421
Q ss_pred CcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchh
Q 012988 239 STLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDW 318 (452)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Di 318 (452)
. ..+.+||+.|+|||++.+..++.++||
T Consensus 184 ~----------------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Di 211 (340)
T PTZ00426 184 R----------------------------------------------------TYTLCGTPEYIAPEILLNVGHGKAADW 211 (340)
T ss_pred C----------------------------------------------------cceecCChhhcCHHHHhCCCCCccccc
Confidence 1 114579999999999999899999999
Q ss_pred hhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCC--CCHHHHhcCCCc
Q 012988 319 WSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGT--GGAHQIKAHPWF 395 (452)
Q Consensus 319 wSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~--~~~~eil~hp~f 395 (452)
|||||++|+|++|..||.+.+....+..+.. ....+|. .+++.+++||++||. ||.+|++. .+++++++||||
T Consensus 212 wSlGvil~ell~G~~Pf~~~~~~~~~~~i~~--~~~~~p~--~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f 287 (340)
T PTZ00426 212 WTLGIFIYEILVGCPPFYANEPLLIYQKILE--GIIYFPK--FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWF 287 (340)
T ss_pred cchhhHHHHHhcCCCCCCCCCHHHHHHHHhc--CCCCCCC--CCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCc
Confidence 9999999999999999999888888888775 3344554 688999999999999 99999764 389999999999
Q ss_pred CCCCccccc--cCCCCccccCCCCccCCCCCCCCCCC
Q 012988 396 KDVVWDKLY--EMEAAFKPEINGELDTQNFMKFDELD 430 (452)
Q Consensus 396 ~~~~~~~l~--~~~~~~~p~~~~~~~~~~~~~~~~~~ 430 (452)
++++|..+. .+.+|+.|......+.++|.++....
T Consensus 288 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 324 (340)
T PTZ00426 288 GNIDWVSLLHKNVEVPYKPKYKNVFDSSNFERVQEDL 324 (340)
T ss_pred CCCCHHHHHhCCCCCCcCCCCCCCcchhhcCCCcccc
Confidence 999999875 57889999999888888887655444
No 28
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=5e-55 Score=429.28 Aligned_cols=298 Identities=45% Similarity=0.832 Sum_probs=262.2
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++.+.||+|+||+||+|.++.+|+.||+|++++...........+.+|+.+++.++||||+++++++.+.+.+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 47999999999999999999999999999999998765544455667889999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 166 EYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 166 E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
||+++|+|.+++.+. ..+++..++.++.|++.||.|||+.||+||||||+|||++.+|.+||+|||++..+.....
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~--- 157 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM--- 157 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCc---
Confidence 999999999999776 6899999999999999999999999999999999999999999999999999986532110
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhcc------CCCCCccchh
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLL------KKGYGMECDW 318 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~------~~~~~~~~Di 318 (452)
.......||+.|+|||++. +..++.++||
T Consensus 158 ---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di 192 (330)
T cd05601 158 ---------------------------------------------VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDW 192 (330)
T ss_pred ---------------------------------------------eeeecccCCccccCHHHhccccccccCCCCCccee
Confidence 0111346999999999987 4567899999
Q ss_pred hhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhcCccccCCCCCHHHHhcCCCcCCC
Q 012988 319 WSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLCDVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 319 wSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
|||||++|+|++|..||...+....+..+......+.+|....+++++.+||.+||++|.+|+ ++.+++.||||..+
T Consensus 193 wslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~~p~~R~---t~~~l~~h~~~~~~ 269 (330)
T cd05601 193 WSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLCGQKERL---GYEGLCCHPFFSKI 269 (330)
T ss_pred ecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHccChhhCC---CHHHHhCCCCcCCC
Confidence 999999999999999999988888888888766666777766789999999999999999999 99999999999999
Q ss_pred CccccccCCCCccccCCCCccCCCCCCCCCCCCCCC
Q 012988 399 VWDKLYEMEAAFKPEINGELDTQNFMKFDELDPPAS 434 (452)
Q Consensus 399 ~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 434 (452)
+|..+....+++.|.+....+.++|.......+...
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (330)
T cd05601 270 DWNNIRNSLPPFVPTLKSDDDTSNFDEPEKNSTRRS 305 (330)
T ss_pred CHHHHhhCCCCccCcCCCcchhhhcCCCcccccccc
Confidence 999998888999999999889999876555544333
No 29
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=9.1e-55 Score=426.23 Aligned_cols=281 Identities=41% Similarity=0.757 Sum_probs=247.9
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeecCCC
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGG 171 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~gg 171 (452)
+.||+|+||+||+|.++.+|+.||+|++.+...........+.+|+.+++.++||||++++++|...+.+|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999999999999999998765555555677889999999999999999999999999999999999999
Q ss_pred ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccccccC
Q 012988 172 DMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTID 251 (452)
Q Consensus 172 sL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~ 251 (452)
+|..++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~------------ 148 (323)
T cd05571 81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD------------ 148 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC------------
Confidence 99999988889999999999999999999999999999999999999999999999999998743110
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhhC
Q 012988 252 DENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVG 331 (452)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~elltG 331 (452)
.......+||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 149 -------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg 191 (323)
T cd05571 149 -------------------------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 191 (323)
T ss_pred -------------------------------------CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcC
Confidence 0011245799999999999999999999999999999999999
Q ss_pred CCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC--CHHHHhcCCCcCCCCccccc--cC
Q 012988 332 YPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG--GAHQIKAHPWFKDVVWDKLY--EM 406 (452)
Q Consensus 332 ~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~--~~~eil~hp~f~~~~~~~l~--~~ 406 (452)
..||.+.+.......+.. ....+|. .+++++.+||.+||. ||.+|++.. ++.++++||||.+++|..+. .+
T Consensus 192 ~~Pf~~~~~~~~~~~~~~--~~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~~~~~~~~~ 267 (323)
T cd05571 192 RLPFYNQDHEKLFELILM--EEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINWQDVVQKKL 267 (323)
T ss_pred CCCCCCCCHHHHHHHHHc--CCCCCCC--CCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCC
Confidence 999998888777777665 3445554 689999999999999 999999643 69999999999999999985 57
Q ss_pred CCCccccCCCCccCCCCCC
Q 012988 407 EAAFKPEINGELDTQNFMK 425 (452)
Q Consensus 407 ~~~~~p~~~~~~~~~~~~~ 425 (452)
.+|+.|.+....+..+|+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~ 286 (323)
T cd05571 268 EPPFKPQVTSETDTRYFDE 286 (323)
T ss_pred CCCcCCCCCCcchhhhcCc
Confidence 7889999998888888864
No 30
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-55 Score=436.02 Aligned_cols=261 Identities=30% Similarity=0.565 Sum_probs=239.8
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEE
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYL 163 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~l 163 (452)
..+-|++.+.||.|+.|.|.+|++..||+..|||++.+...........+.+|+.||+.+.||||+++|++|++..++|+
T Consensus 10 tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lyl 89 (786)
T KOG0588|consen 10 TIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYL 89 (786)
T ss_pred cccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEE
Confidence 45779999999999999999999999999999999988755556666789999999999999999999999999999999
Q ss_pred EEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 164 IMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 164 V~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
|+||++||.|++++.+.+++++.+++.++.||+.|+.|+|..+|+||||||+|+|+|..++|||+|||+|..-.++
T Consensus 90 vlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g---- 165 (786)
T KOG0588|consen 90 VLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPG---- 165 (786)
T ss_pred EEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999754321
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCC-Cccchhhhhh
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGY-GMECDWWSLG 322 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~-~~~~DiwSlG 322 (452)
.+..+-||+|.|.|||++.|.+| +.++||||.|
T Consensus 166 ----------------------------------------------klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCG 199 (786)
T KOG0588|consen 166 ----------------------------------------------KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCG 199 (786)
T ss_pred ----------------------------------------------ccccccCCCcccCCchhhcCCCCCCCccccchhH
Confidence 23346799999999999999999 7899999999
Q ss_pred HHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCCCcc
Q 012988 323 AIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDVVWD 401 (452)
Q Consensus 323 vil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~~~~ 401 (452)
||||.||||++||.+++-...+.++.. +.+.+|. .+|++++|||.+||. ||..|+ +.+||++|||+.+..-.
T Consensus 200 VILfALLtG~LPFdDdNir~LLlKV~~--G~f~MPs--~Is~eaQdLLr~ml~VDp~~Ri---T~~eI~kHP~l~g~~~~ 272 (786)
T KOG0588|consen 200 VILFALLTGKLPFDDDNIRVLLLKVQR--GVFEMPS--NISSEAQDLLRRMLDVDPSTRI---TTEEILKHPFLSGYTSL 272 (786)
T ss_pred HHHHHHHhCCCCCCCccHHHHHHHHHc--CcccCCC--cCCHHHHHHHHHHhccCccccc---cHHHHhhCchhhcCCCC
Confidence 999999999999999998888888876 6677774 899999999999998 999999 99999999999976533
No 31
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=5.3e-55 Score=432.42 Aligned_cols=323 Identities=55% Similarity=0.982 Sum_probs=271.0
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++++.||+|+||+||+|.+..+|+.||||++.+...........+..|+.++..++||||+++++++.+.+++|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47999999999999999999999999999999998776555566778899999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
||+++|+|.+++...+.+++..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||++..+.........
T Consensus 81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~ 160 (350)
T cd05573 81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYY 160 (350)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccc
Confidence 99999999999988889999999999999999999999999999999999999999999999999999866432110000
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 325 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil 325 (452)
......... ......................||+.|+|||++.+..++.++|||||||++
T Consensus 161 ~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il 220 (350)
T cd05573 161 LNDSHNLLF--------------------RDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVIL 220 (350)
T ss_pred ccccccccc--------------------cccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhh
Confidence 000000000 000000000000011223356799999999999999999999999999999
Q ss_pred HHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhcCccccCCCCC-HHHHhcCCCcCCCCccccc
Q 012988 326 YEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLCDVEHRLGTGG-AHQIKAHPWFKDVVWDKLY 404 (452)
Q Consensus 326 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~dp~~R~~~~~-~~eil~hp~f~~~~~~~l~ 404 (452)
|+|++|+.||...+.......+..+...+.+|....+++++.+||.+||.||.+|+ + +.++++||||++++|+...
T Consensus 221 ~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~dp~~R~---~s~~~ll~hp~~~~~~~~~~~ 297 (350)
T cd05573 221 YEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLCDPEDRL---GSFEEIKSHPFFKGIDWENLR 297 (350)
T ss_pred hhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHccChhhcC---CCHHHHhcCCCcCCCCHHHHh
Confidence 99999999999999888888898887888888777789999999999999999999 7 9999999999999999999
Q ss_pred cCCCCccccCCCCccCCCCCCCCCCCC
Q 012988 405 EMEAAFKPEINGELDTQNFMKFDELDP 431 (452)
Q Consensus 405 ~~~~~~~p~~~~~~~~~~~~~~~~~~~ 431 (452)
...+++.|.+.+..+..+|+......+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (350)
T cd05573 298 ETKPPFVPELSSPLDTSNFDDFEDDKD 324 (350)
T ss_pred hCCCCcCCCCCCchhhhhcCCCCcccc
Confidence 888999999999999999988766554
No 32
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=4e-55 Score=422.45 Aligned_cols=285 Identities=41% Similarity=0.823 Sum_probs=252.6
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++++.||+|+||+||+|.++.+|+.||+|++...........+.+.+|+.+++.++||||+++++++.+...+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 47999999999999999999999999999999997665444445667889999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
||+++|+|.+++...+.+++..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+++.+...
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~------ 154 (291)
T cd05612 81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR------ 154 (291)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC------
Confidence 99999999999988889999999999999999999999999999999999999999999999999998754211
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 325 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil 325 (452)
....+||+.|+|||++.+..++.++|||||||++
T Consensus 155 ----------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il 188 (291)
T cd05612 155 ----------------------------------------------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILI 188 (291)
T ss_pred ----------------------------------------------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHH
Confidence 1135699999999999999999999999999999
Q ss_pred HHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC--CHHHHhcCCCcCCCCccc
Q 012988 326 YEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG--GAHQIKAHPWFKDVVWDK 402 (452)
Q Consensus 326 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~--~~~eil~hp~f~~~~~~~ 402 (452)
|+|++|..||.+.+....+..+... ...+|. .+++.+++||++||. ||.+|++.. ++.+++.||||..++|..
T Consensus 189 ~~l~~g~~pf~~~~~~~~~~~i~~~--~~~~~~--~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~ 264 (291)
T cd05612 189 YEMLVGYPPFFDDNPFGIYEKILAG--KLEFPR--HLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWDD 264 (291)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHhC--CcCCCc--cCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCHHH
Confidence 9999999999998888888877763 344554 578999999999999 999999532 599999999999999998
Q ss_pred cc--cCCCCccccCCCCccCCCCCCC
Q 012988 403 LY--EMEAAFKPEINGELDTQNFMKF 426 (452)
Q Consensus 403 l~--~~~~~~~p~~~~~~~~~~~~~~ 426 (452)
+. +..+++.|.+....++.+|+..
T Consensus 265 ~~~~~~~~~~~p~~~~~~~~~~~~~~ 290 (291)
T cd05612 265 VPQRKLKPPIVPKVSHDGDTSNFDDY 290 (291)
T ss_pred HhcCCCCCCEeCCCCCccccccccCC
Confidence 75 4667888998888888888653
No 33
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1e-54 Score=427.65 Aligned_cols=289 Identities=46% Similarity=0.840 Sum_probs=258.2
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++++.||+|+||.||+|++..+++.||+|++.+...........+.+|+.++..++||||+++++++.+.+.+|+||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999998765544555677889999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
||++||+|.+++...+.+++..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~------- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT------- 153 (333)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc-------
Confidence 9999999999998888999999999999999999999999999999999999999999999999999875421
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 325 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil 325 (452)
.....+||+.|+|||++.+..++.++|||||||++
T Consensus 154 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il 188 (333)
T cd05600 154 ---------------------------------------------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCML 188 (333)
T ss_pred ---------------------------------------------ccCCcccCccccChhHhcCCCCCCccceecchHHH
Confidence 11245799999999999999999999999999999
Q ss_pred HHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCC----CCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCCCc
Q 012988 326 YEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDS----KLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDVVW 400 (452)
Q Consensus 326 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~----~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~~~ 400 (452)
|+|++|..||.+.+..+.+..+..+...+..|... .+++++.+||.+||. +|.+|+ ++.++++||||.+++|
T Consensus 189 ~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~---s~~~ll~h~~~~~~~~ 265 (333)
T cd05600 189 YEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFG---SLEDIKNHPFFKEVDW 265 (333)
T ss_pred hhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcC---CHHHHHhCcccCCCCH
Confidence 99999999999998888888887766555555432 568999999999999 888889 8999999999999999
Q ss_pred cccccCCCCccccCCCCccCCCCCCCCCC
Q 012988 401 DKLYEMEAAFKPEINGELDTQNFMKFDEL 429 (452)
Q Consensus 401 ~~l~~~~~~~~p~~~~~~~~~~~~~~~~~ 429 (452)
..+.+..+++.|.+....+..+|+.+...
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (333)
T cd05600 266 NELRELKPPFVPELESEIDTGYFDDFENE 294 (333)
T ss_pred HHHhhCCCCCCCCCCCcchhhhccCCCCc
Confidence 99998899999999888887777655443
No 34
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=4.4e-54 Score=428.90 Aligned_cols=307 Identities=47% Similarity=0.890 Sum_probs=263.9
Q ss_pred HhhhhcCCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEE
Q 012988 75 FMRLKRHKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYS 154 (452)
Q Consensus 75 ~~~~~~~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~ 154 (452)
...++...+..++|++++.||+|+||.||+|+++.+++.||+|++.+...........+.+|+.+++.++||||++++++
T Consensus 32 ~~~~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~ 111 (371)
T cd05622 32 INKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYA 111 (371)
T ss_pred hhHHhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 34455667778999999999999999999999999999999999987555444555667889999999999999999999
Q ss_pred EEcCCeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCc
Q 012988 155 FQDTEYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCK 234 (452)
Q Consensus 155 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~ 234 (452)
+.+.+.+|+||||++||+|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||+++
T Consensus 112 ~~~~~~~~lv~Ey~~gg~L~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~ 190 (371)
T cd05622 112 FQDDRYLYMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 190 (371)
T ss_pred EEcCCEEEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCcee
Confidence 9999999999999999999998854 468999999999999999999999999999999999999999999999999988
Q ss_pred cCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCC---
Q 012988 235 PLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKG--- 311 (452)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~--- 311 (452)
.+.... .......+||+.|+|||++.+..
T Consensus 191 ~~~~~~------------------------------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~ 222 (371)
T cd05622 191 KMNKEG------------------------------------------------MVRCDTAVGTPDYISPEVLKSQGGDG 222 (371)
T ss_pred EcCcCC------------------------------------------------cccccCcccCccccCHHHHhccCCCc
Confidence 653110 00112457999999999997543
Q ss_pred -CCccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhcCccccCCCCCHHHHh
Q 012988 312 -YGMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLCDVEHRLGTGGAHQIK 390 (452)
Q Consensus 312 -~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~dp~~R~~~~~~~eil 390 (452)
++.++|||||||++|+|++|..||.+.+....+..+......+.+|....++..+++||.+||.+|..|+++.++.+|+
T Consensus 223 ~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~ 302 (371)
T cd05622 223 YYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIK 302 (371)
T ss_pred cCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHh
Confidence 7899999999999999999999999999888888888766667778777899999999999999778777766999999
Q ss_pred cCCCcCCCC--ccccccCCCCccccCCCCccCCCCCCCCCCC
Q 012988 391 AHPWFKDVV--WDKLYEMEAAFKPEINGELDTQNFMKFDELD 430 (452)
Q Consensus 391 ~hp~f~~~~--~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~ 430 (452)
+||||++.. |..+.+..+|+.|.+....+.++|.+.....
T Consensus 303 ~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (371)
T cd05622 303 RHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDIEEDK 344 (371)
T ss_pred cCcccCCCChhHHhcCCCCCCCCCCCCCcchhhhcCCCcccc
Confidence 999999855 5666778889999998888888887655443
No 35
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-57 Score=398.45 Aligned_cols=261 Identities=31% Similarity=0.585 Sum_probs=239.1
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEE
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYL 163 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~l 163 (452)
..+.|++-..||+|+|+.||++.+..+|+.||+|++....+..+ ..+.+.+|+.|-+.|+|||||++.+.+...++.||
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~-~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~yl 87 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 87 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc-cHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEE
Confidence 45789999999999999999999999999999999987766555 56789999999999999999999999999999999
Q ss_pred EEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCC---cEEEeeccCCccCCCCc
Q 012988 164 IMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNG---HMKLSDFGLCKPLDCST 240 (452)
Q Consensus 164 V~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g---~ikl~DFGla~~~~~~~ 240 (452)
|+|+|.|++|..-+-.+..++|..+-.+++||+.||.|+|.+||||||+||+|+|+.+.. -+||+|||+|..++.+
T Consensus 88 vFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g- 166 (355)
T KOG0033|consen 88 VFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDG- 166 (355)
T ss_pred EEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCc-
Confidence 999999999998887777899999999999999999999999999999999999996543 5899999999987521
Q ss_pred chhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhh
Q 012988 241 LYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWS 320 (452)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwS 320 (452)
.....++|||+|||||++...+|+..+|||+
T Consensus 167 -------------------------------------------------~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~ 197 (355)
T KOG0033|consen 167 -------------------------------------------------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWA 197 (355)
T ss_pred -------------------------------------------------cccccccCCCcccCHHHhhcCCCCCcchhhh
Confidence 1234678999999999999999999999999
Q ss_pred hhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCC
Q 012988 321 LGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 321 lGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
.||+||-||.|++||.+.+....+..|....-.++-|.++.+++++++||++||. ||.+|+ |+.|+|+|||+++-
T Consensus 198 cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRI---ta~EAL~HpWi~~r 273 (355)
T KOG0033|consen 198 CGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRI---TADEALKHPWICNR 273 (355)
T ss_pred hhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhc---cHHHHhCCchhcch
Confidence 9999999999999999999999999999977777777889999999999999999 999999 99999999999863
No 36
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=8e-54 Score=427.02 Aligned_cols=303 Identities=48% Similarity=0.899 Sum_probs=259.0
Q ss_pred hhcCCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEc
Q 012988 78 LKRHKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQD 157 (452)
Q Consensus 78 ~~~~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~ 157 (452)
+....+..++|++++.||+|+||+||+|+++.++..||+|++.+...........+.+|+.+++.++||||+++++++.+
T Consensus 35 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~ 114 (370)
T cd05596 35 ITKLRMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQD 114 (370)
T ss_pred hccCCCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence 34556778899999999999999999999999999999999987655444555667889999999999999999999999
Q ss_pred CCeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCC
Q 012988 158 TEYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLD 237 (452)
Q Consensus 158 ~~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~ 237 (452)
.+.+|+||||++||+|.+++.. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+||+|||++....
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~ 193 (370)
T cd05596 115 DKYLYMVMEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMD 193 (370)
T ss_pred CCEEEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence 9999999999999999998854 468999999999999999999999999999999999999999999999999987643
Q ss_pred CCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC----CCC
Q 012988 238 CSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK----GYG 313 (452)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~----~~~ 313 (452)
.... ......+||+.|+|||++.+. .++
T Consensus 194 ~~~~------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 225 (370)
T cd05596 194 ANGM------------------------------------------------VRCDTAVGTPDYISPEVLKSQGGDGYYG 225 (370)
T ss_pred CCCc------------------------------------------------ccCCCCCCCcCeECHHHhccCCCCCCCC
Confidence 1100 011245799999999998753 378
Q ss_pred ccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcC
Q 012988 314 MECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAH 392 (452)
Q Consensus 314 ~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~h 392 (452)
.++|||||||++|+|++|..||.+.+....+..+......+.+|....+|.++++||.+||. +|.. +++.++.++++|
T Consensus 226 ~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r-~~R~s~~ell~h 304 (370)
T cd05596 226 RECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVR-LGRNGVDEIKSH 304 (370)
T ss_pred CceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhc-cCCCCHHHHhcC
Confidence 99999999999999999999999999888888888766667778766789999999999998 6654 323399999999
Q ss_pred CCcCCCCccc--cccCCCCccccCCCCccCCCCCCCCCCC
Q 012988 393 PWFKDVVWDK--LYEMEAAFKPEINGELDTQNFMKFDELD 430 (452)
Q Consensus 393 p~f~~~~~~~--l~~~~~~~~p~~~~~~~~~~~~~~~~~~ 430 (452)
|||++.+|.. +.+..+++.|.+....+..+|+.....+
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 344 (370)
T cd05596 305 PFFKNDQWTFDNIRETVAPVVPELSSDIDTSNFDDIEDDD 344 (370)
T ss_pred cccCCCChhhHHhcCCCcCccCcCCCcchhhhcCCccccc
Confidence 9999988764 3466788999999999999988765544
No 37
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.8e-53 Score=415.02 Aligned_cols=279 Identities=44% Similarity=0.840 Sum_probs=246.8
Q ss_pred eccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeecCCCCh
Q 012988 94 IGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDM 173 (452)
Q Consensus 94 LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~ggsL 173 (452)
||+|+||+||+|++..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+.+.+|+||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 79999999999999999999999999876555555667788999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccccccCcc
Q 012988 174 MTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDE 253 (452)
Q Consensus 174 ~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~ 253 (452)
.+++...+.+++..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+++......
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~------------- 147 (312)
T cd05585 81 FHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD------------- 147 (312)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC-------------
Confidence 9999888899999999999999999999999999999999999999999999999999987532100
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhhCCC
Q 012988 254 NMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 333 (452)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~elltG~~ 333 (452)
......+||+.|+|||++.+..++.++|||||||++|+|++|..
T Consensus 148 ------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~ 191 (312)
T cd05585 148 ------------------------------------DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLP 191 (312)
T ss_pred ------------------------------------CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCC
Confidence 01124579999999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCCCccccc--cCCCCc
Q 012988 334 PFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDVVWDKLY--EMEAAF 410 (452)
Q Consensus 334 Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~~~~~l~--~~~~~~ 410 (452)
||.+.+....+..+.. ..+.+|. .+++++++||.+||. ||.+|++..++.+++.||||.+++|..+. ...+++
T Consensus 192 pf~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~~~~~~~~~~~~~~~ 267 (312)
T cd05585 192 PFYDENVNEMYRKILQ--EPLRFPD--GFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLSWKKLLMKGIQPPF 267 (312)
T ss_pred CcCCCCHHHHHHHHHc--CCCCCCC--cCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCc
Confidence 9998888887777765 3445554 689999999999999 99999987789999999999999998774 467888
Q ss_pred cccCCCCccCCCCCC
Q 012988 411 KPEINGELDTQNFMK 425 (452)
Q Consensus 411 ~p~~~~~~~~~~~~~ 425 (452)
.|.+....+.++|+.
T Consensus 268 ~~~~~~~~~~~~~~~ 282 (312)
T cd05585 268 KPAVSSAIDTSNFDE 282 (312)
T ss_pred CCCCCCccchhhcCc
Confidence 998888888888864
No 38
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=2.7e-53 Score=417.17 Aligned_cols=292 Identities=50% Similarity=0.909 Sum_probs=252.6
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++++.||+|+||+||+++++.+++.||+|++.+...........+..|+.++..++|++|+++++++.+.+.+|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 57999999999999999999999999999999998755444445566888999999999999999999999999999999
Q ss_pred eecCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 166 EYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 166 E~~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
||++||+|.+++.. ...+++..++.++.|++.||+|||++||+||||||+|||++.+|.+||+|||+++.......
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~--- 157 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT--- 157 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCc---
Confidence 99999999999977 46899999999999999999999999999999999999999999999999999876531100
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-----CCCCccchhh
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-----KGYGMECDWW 319 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-----~~~~~~~Diw 319 (452)
......+||+.|+|||++.+ ..++.++|||
T Consensus 158 ---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diw 192 (331)
T cd05624 158 ---------------------------------------------VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWW 192 (331)
T ss_pred ---------------------------------------------eeeccccCCcccCCHHHHhccccCCCCCCCcccEE
Confidence 00113469999999999875 4678999999
Q ss_pred hhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCC-CCCChhHHHHHHHhhcCccccCCCCCHHHHhcCCCcCCC
Q 012988 320 SLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDD-SKLSPEAKDLICRLLCDVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 320 SlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~-~~~s~~~~dLi~~mL~dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
||||++|+|++|+.||.+.+..+.+..+......+.+|.. ..++.++++||.+||+.+.+|++..+++++++||||+++
T Consensus 193 SlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~ 272 (331)
T cd05624 193 SLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI 272 (331)
T ss_pred eeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence 9999999999999999998888888888765555555542 357899999999999855567666689999999999999
Q ss_pred CccccccCCCCccccCCCCccCCCCCC
Q 012988 399 VWDKLYEMEAAFKPEINGELDTQNFMK 425 (452)
Q Consensus 399 ~~~~l~~~~~~~~p~~~~~~~~~~~~~ 425 (452)
+|+.+....+|+.|....+.+..+|+.
T Consensus 273 ~~~~~~~~~~~~~p~~~~~~~~~~~~~ 299 (331)
T cd05624 273 DWENIRNLEAPYIPDVSSPSDTSNFDV 299 (331)
T ss_pred CHHHHhhCCCCccCCCCCcchhhhcCC
Confidence 999999999999999888888777764
No 39
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=3.8e-53 Score=416.16 Aligned_cols=294 Identities=51% Similarity=0.918 Sum_probs=253.0
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++++.||+|+||+||+|++..+++.||+|++.+...........+.+|+.++..++|+||++++++|.+.+++|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 57999999999999999999999999999999998765555555677889999999999999999999999999999999
Q ss_pred eecCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 166 EYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 166 E~~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
||++||+|.+++.+ ...+++..++.++.|++.||+|||++||+||||||+|||++.+|.+||+|||++..+.....
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--- 157 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT--- 157 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC---
Confidence 99999999999976 46799999999999999999999999999999999999999999999999999875431100
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-----CCCCccchhh
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-----KGYGMECDWW 319 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-----~~~~~~~Diw 319 (452)
......+||+.|+|||++.. ..++.++|||
T Consensus 158 ---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diw 192 (331)
T cd05597 158 ---------------------------------------------VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWW 192 (331)
T ss_pred ---------------------------------------------ccccceeccccccCHHHHhhccccccCCCCcceee
Confidence 00112469999999999973 4578899999
Q ss_pred hhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCC-CCCChhHHHHHHHhhcCccccCCCCCHHHHhcCCCcCCC
Q 012988 320 SLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDD-SKLSPEAKDLICRLLCDVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 320 SlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~-~~~s~~~~dLi~~mL~dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
||||++|+|++|+.||.+.+..+.+..+......+.+|.. ..++.++++||++||+.|.+|+++.++.++++||||.++
T Consensus 193 slG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 193 SLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI 272 (331)
T ss_pred hhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence 9999999999999999998888888887765444554432 357999999999999866676666699999999999999
Q ss_pred CccccccCCCCccccCCCCccCCCCCCCC
Q 012988 399 VWDKLYEMEAAFKPEINGELDTQNFMKFD 427 (452)
Q Consensus 399 ~~~~l~~~~~~~~p~~~~~~~~~~~~~~~ 427 (452)
+|..+....+++.|......+..+|+..+
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (331)
T cd05597 273 DWDNIRNSTAPYVPEVSSPTDTSNFDVDD 301 (331)
T ss_pred CHHHHhhCCCCccCcCCCcchhhhcCCcc
Confidence 99999888888999998888888876544
No 40
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.7e-53 Score=416.68 Aligned_cols=287 Identities=37% Similarity=0.685 Sum_probs=248.5
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEEcCCeEEEEEeecCC
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQDTEYLYLIMEYLPG 170 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~~~~lV~E~~~g 170 (452)
+.||+|+||+||+|+++.+++.||+|++.+...........+..|..++..+ +||||+++++++.+.+.+|+||||++|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999999999999999999876554555566777888888876 699999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcccccc
Q 012988 171 GDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTI 250 (452)
Q Consensus 171 gsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~ 250 (452)
|+|..++.....+++..+..++.|++.||.|||++||+||||||+|||++.+|.+||+|||+++......
T Consensus 81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~---------- 150 (320)
T cd05590 81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG---------- 150 (320)
T ss_pred chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC----------
Confidence 9999999888899999999999999999999999999999999999999999999999999987532100
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhh
Q 012988 251 DDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 330 (452)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ellt 330 (452)
......+||+.|+|||++.+..++.++|||||||++|+|++
T Consensus 151 ---------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~ 191 (320)
T cd05590 151 ---------------------------------------KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLC 191 (320)
T ss_pred ---------------------------------------CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhh
Confidence 01124579999999999999999999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC---CHHHHhcCCCcCCCCccccc--
Q 012988 331 GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG---GAHQIKAHPWFKDVVWDKLY-- 404 (452)
Q Consensus 331 G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~---~~~eil~hp~f~~~~~~~l~-- 404 (452)
|+.||.+.+....+..+.. ....+|. .++.++++||.+||. ||.+|++.. +.++++.||||.+++|+.+.
T Consensus 192 g~~Pf~~~~~~~~~~~i~~--~~~~~~~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~~~~~~~ 267 (320)
T cd05590 192 GHAPFEAENEDDLFEAILN--DEVVYPT--WLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDWEKLNRR 267 (320)
T ss_pred CCCCCCCCCHHHHHHHHhc--CCCCCCC--CCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCHHHHHhC
Confidence 9999999988888887765 3334443 689999999999999 999999531 23999999999999999885
Q ss_pred cCCCCccccCCCCccCCCCCCCCCCCC
Q 012988 405 EMEAAFKPEINGELDTQNFMKFDELDP 431 (452)
Q Consensus 405 ~~~~~~~p~~~~~~~~~~~~~~~~~~~ 431 (452)
...+||.|.+.+..+.++|+.....+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (320)
T cd05590 268 QIEPPFRPRIKSREDVSNFDPDFIKED 294 (320)
T ss_pred CCCCCcCCCCCCcchhhhcCcccccCC
Confidence 478899999999999999986544443
No 41
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-55 Score=398.77 Aligned_cols=305 Identities=35% Similarity=0.648 Sum_probs=268.6
Q ss_pred CCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEEcCC
Q 012988 81 HKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQDTE 159 (452)
Q Consensus 81 ~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~ 159 (452)
+.+.+++|.++++||+|+|++|.+++.++|.+.||+|++++.-+.....+..++.|..+.... +||++|.+..+|+++.
T Consensus 245 ~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtes 324 (593)
T KOG0695|consen 245 QGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTES 324 (593)
T ss_pred cccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccc
Confidence 456789999999999999999999999999999999999988777778889999999998776 7999999999999999
Q ss_pred eEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 160 YLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
.+++|.||++||+|.-.+++++.++++.+++|..+|+.||+|||++|||+||||.+|||+|..|++||+|+|.++.--.
T Consensus 325 rlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~- 403 (593)
T KOG0695|consen 325 RLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG- 403 (593)
T ss_pred eEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999985321
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhh
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWW 319 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Diw 319 (452)
....+.++||||.|.|||++.+..|+.++|||
T Consensus 404 ------------------------------------------------~gd~tstfcgtpnyiapeilrgeeygfsvdww 435 (593)
T KOG0695|consen 404 ------------------------------------------------PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWW 435 (593)
T ss_pred ------------------------------------------------CCcccccccCCCcccchhhhcccccCceehHH
Confidence 12235588999999999999999999999999
Q ss_pred hhhHHHHHhhhCCCCCCC-------CChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC---CHHH
Q 012988 320 SLGAIMYEMLVGYPPFYA-------DDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG---GAHQ 388 (452)
Q Consensus 320 SlGvil~elltG~~Pf~~-------~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~---~~~e 388 (452)
+|||+++||+.|+.||.- .+.++.+.+++. ...+.+|. .+|-.+..+++..|+ ||.+|+|.. ++.+
T Consensus 436 algvlmfemmagrspfdivgm~n~d~ntedylfqvil-ekqiripr--slsvkas~vlkgflnkdp~erlgc~~~~g~~d 512 (593)
T KOG0695|consen 436 ALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVIL-EKQIRIPR--SLSVKASHVLKGFLNKDPKERLGCRPQTGFSD 512 (593)
T ss_pred HHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHh-hhcccccc--eeehhhHHHHHHhhcCCcHHhcCCCcccchhh
Confidence 999999999999999952 233444444443 24556665 688899999999998 999999853 8999
Q ss_pred HhcCCCcCCCCccccc--cCCCCccccCCCCccCCCCCCCCCCCCCCCCCC
Q 012988 389 IKAHPWFKDVVWDKLY--EMEAAFKPEINGELDTQNFMKFDELDPPASGRT 437 (452)
Q Consensus 389 il~hp~f~~~~~~~l~--~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (452)
+..|+||+.|+|+.+. ++.|||.|.+.+..+..+|+.....+++-.++-
T Consensus 513 ik~h~ffr~idwd~leqk~v~ppf~p~i~~d~~l~~fd~qft~e~~qltpd 563 (593)
T KOG0695|consen 513 IKSHAFFRSIDWDLLEQKQVLPPFQPQITDDYGLDNFDTQFTSEPVQLTPD 563 (593)
T ss_pred hhcchhhhhCCHHHHhhcccCCCCCCccccccCccccccccccCCcccCCC
Confidence 9999999999999995 478999999999999999998766665554443
No 42
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.5e-55 Score=385.12 Aligned_cols=259 Identities=39% Similarity=0.619 Sum_probs=240.3
Q ss_pred CCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCe
Q 012988 81 HKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEY 160 (452)
Q Consensus 81 ~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~ 160 (452)
....+++|++.+.||+|-||.||+|+.+.++-.||+|++.++.+........+.+|++|.+.|+||||.++|++|.+...
T Consensus 17 ~~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~r 96 (281)
T KOG0580|consen 17 KTWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKR 96 (281)
T ss_pred cccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccce
Confidence 45678999999999999999999999999999999999999988887777889999999999999999999999999999
Q ss_pred EEEEEeecCCCChHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCC
Q 012988 161 LYLIMEYLPGGDMMTLLM--REDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDC 238 (452)
Q Consensus 161 ~~lV~E~~~ggsL~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~ 238 (452)
+|+++||.++|+|...|. ....+++..+..|+.|++.||.|+|..+||||||||+|+|++..|.+||+|||.+...++
T Consensus 97 iyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~ 176 (281)
T KOG0580|consen 97 IYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 176 (281)
T ss_pred eEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCC
Confidence 999999999999999998 567899999999999999999999999999999999999999999999999999765321
Q ss_pred CcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchh
Q 012988 239 STLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDW 318 (452)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Di 318 (452)
....+.|||..|.+||++.+..++..+|+
T Consensus 177 ---------------------------------------------------~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~ 205 (281)
T KOG0580|consen 177 ---------------------------------------------------NKRKTLCGTLDYLPPEMVEGRGHDKFVDL 205 (281)
T ss_pred ---------------------------------------------------CCceeeecccccCCHhhcCCCCccchhhH
Confidence 12347899999999999999999999999
Q ss_pred hhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 319 WSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 319 wSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
|++|++.||++.|.+||...+..+++.+|.. ..+.+| ..++.+++|||.+||. +|.+|+ ...|++.|||...
T Consensus 206 w~lgvl~yeflvg~ppFes~~~~etYkrI~k--~~~~~p--~~is~~a~dlI~~ll~~~p~~r~---~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 206 WSLGVLCYEFLVGLPPFESQSHSETYKRIRK--VDLKFP--STISGGAADLISRLLVKNPIERL---ALTEVMDHPWIVA 278 (281)
T ss_pred HHHHHHHHHHHhcCCchhhhhhHHHHHHHHH--ccccCC--cccChhHHHHHHHHhccCccccc---cHHHHhhhHHHHh
Confidence 9999999999999999999999999999987 456666 4899999999999998 999999 8999999999853
No 43
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=4.7e-55 Score=395.89 Aligned_cols=260 Identities=31% Similarity=0.497 Sum_probs=221.4
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
+.|+.+.++|+|+||+||+|+++.||+.||||++..+.. .....+-..+|+.+|++++|+|+|.++++|.....+++|+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esed-d~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVF 80 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESED-DPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVF 80 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCc-cHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEe
Confidence 568999999999999999999999999999999875532 1222345689999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
|||+..-|..+-.....++++.++.|++|++.|+.|+|++++||||||||||||+.+|.+||||||+|+.+..+.
T Consensus 81 E~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg----- 155 (396)
T KOG0593|consen 81 EYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG----- 155 (396)
T ss_pred eecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCc-----
Confidence 999765444443334679999999999999999999999999999999999999999999999999999875211
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchhhhhhHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAI 324 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~DiwSlGvi 324 (452)
...+..+.|.+|+|||.+.+ ..|+..+||||+||+
T Consensus 156 --------------------------------------------d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv 191 (396)
T KOG0593|consen 156 --------------------------------------------DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCV 191 (396)
T ss_pred --------------------------------------------chhhhhhhhhhccChhhhcccCcCCCcccchhhhHH
Confidence 12235789999999999988 889999999999999
Q ss_pred HHHhhhCCCCCCCCChHHHHHHHhhccCc-----------------ccCCC----------CCCCChhHHHHHHHhhc-C
Q 012988 325 MYEMLVGYPPFYADDPITTCRKIVHWRNH-----------------LKFPD----------DSKLSPEAKDLICRLLC-D 376 (452)
Q Consensus 325 l~elltG~~Pf~~~~~~~~~~~i~~~~~~-----------------~~~p~----------~~~~s~~~~dLi~~mL~-d 376 (452)
+.||++|.+.|.+.++.+.+..|...-+. +.+|. .+.++.-+.||+++||. |
T Consensus 192 ~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~d 271 (396)
T KOG0593|consen 192 FAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMD 271 (396)
T ss_pred HHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCC
Confidence 99999999999999999988887652111 12222 13567889999999999 9
Q ss_pred ccccCCCCCHHHHhcCCCcCCC
Q 012988 377 VEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 377 p~~R~~~~~~~eil~hp~f~~~ 398 (452)
|.+|+ +.+|++.||||.++
T Consensus 272 P~~R~---sc~qll~H~yFd~~ 290 (396)
T KOG0593|consen 272 PDDRL---SCEQLLHHPYFDGF 290 (396)
T ss_pred ccccc---cHHHHhcChHHHHH
Confidence 99999 99999999999653
No 44
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=5.8e-53 Score=415.04 Aligned_cols=293 Identities=49% Similarity=0.899 Sum_probs=252.7
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++++.||+|+||+||++..+.+++.||+|++.+...........+..|+.++..++|++|+++++++.+.+.+|+||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 47999999999999999999999999999999997755545555566888999999999999999999999999999999
Q ss_pred eecCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 166 EYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 166 E~~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
||+++|+|.+++.+ ...+++..++.++.|++.||.|||+.||+||||||+|||++.++.+||+|||++..+....
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~---- 156 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG---- 156 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCC----
Confidence 99999999999976 4679999999999999999999999999999999999999999999999999987542110
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhcc-----CCCCCccchhh
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLL-----KKGYGMECDWW 319 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~-----~~~~~~~~Diw 319 (452)
.......+||+.|+|||++. ...++.++|||
T Consensus 157 --------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Dvw 192 (332)
T cd05623 157 --------------------------------------------TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWW 192 (332)
T ss_pred --------------------------------------------cceecccccCccccCHHHHhccccCCCCCCCcCCEE
Confidence 00111347999999999986 34678999999
Q ss_pred hhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCC-CCCChhHHHHHHHhhcCccccCCCCCHHHHhcCCCcCCC
Q 012988 320 SLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDD-SKLSPEAKDLICRLLCDVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 320 SlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~-~~~s~~~~dLi~~mL~dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
||||++|||++|+.||.+.+..+.+..+......+.+|.. ..+++++++||.+||+.+.+|+++.++.++++||||.++
T Consensus 193 SlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~ 272 (332)
T cd05623 193 SLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGI 272 (332)
T ss_pred eeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence 9999999999999999999988888888765555555543 357999999999999855667666699999999999999
Q ss_pred CccccccCCCCccccCCCCccCCCCCCC
Q 012988 399 VWDKLYEMEAAFKPEINGELDTQNFMKF 426 (452)
Q Consensus 399 ~~~~l~~~~~~~~p~~~~~~~~~~~~~~ 426 (452)
+|+.+....+++.|...++.+.+++.-.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (332)
T cd05623 273 DWDNIRNCEAPYIPEVSSPTDTSNFDVD 300 (332)
T ss_pred CHHHHhhCCCCccCCCCCCcccccCCCC
Confidence 9999988888999998888888777543
No 45
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=4.2e-53 Score=414.63 Aligned_cols=294 Identities=37% Similarity=0.725 Sum_probs=253.7
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCC-ceeeEEEEEEcCCeEEEEE
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASH-CIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp-~iv~l~~~~~~~~~~~lV~ 165 (452)
+|++++.||+|+||.||+|+++.+++.||||++.+.........+.+..|+.++..+.|+ +|+.++++|.+.+.+|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 589999999999999999999999999999999876554555567788899999999765 6889999999999999999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
||++||+|..++.....+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~------ 154 (324)
T cd05587 81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG------ 154 (324)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC------
Confidence 99999999999988888999999999999999999999999999999999999999999999999998743110
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 325 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil 325 (452)
.......+||+.|+|||++.+..++.++|||||||++
T Consensus 155 -------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil 191 (324)
T cd05587 155 -------------------------------------------GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLL 191 (324)
T ss_pred -------------------------------------------CCceeeecCCccccChhhhcCCCCCcccchhhhHHHH
Confidence 0011245799999999999999999999999999999
Q ss_pred HHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC--CHHHHhcCCCcCCCCccc
Q 012988 326 YEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG--GAHQIKAHPWFKDVVWDK 402 (452)
Q Consensus 326 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~--~~~eil~hp~f~~~~~~~ 402 (452)
|+|++|+.||.+.+....+..+.. ....+|. .++.++.+||.+||. ||.+|++.. ...++++||||+.++|..
T Consensus 192 ~elltG~~pf~~~~~~~~~~~i~~--~~~~~~~--~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~~~ 267 (324)
T cd05587 192 YEMLAGQPPFDGEDEDELFQSIME--HNVSYPK--SLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDWEK 267 (324)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHc--CCCCCCC--CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCHHH
Confidence 999999999999888888887765 3344443 689999999999999 999999642 458999999999999998
Q ss_pred cc--cCCCCccccCCCCccCCCCCCCCCCCCCC
Q 012988 403 LY--EMEAAFKPEINGELDTQNFMKFDELDPPA 433 (452)
Q Consensus 403 l~--~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 433 (452)
+. ...+++.|.+....+.++|+.+.......
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (324)
T cd05587 268 LERREIQPPFKPKVKGRRSAENFDKFFTREPPV 300 (324)
T ss_pred HHhCCCCCCccCcCCCcchhhhcCcccccCccc
Confidence 85 46788899998888888988765444333
No 46
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=6.6e-53 Score=413.83 Aligned_cols=281 Identities=41% Similarity=0.753 Sum_probs=245.9
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeecCCC
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGG 171 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~gg 171 (452)
+.||+|+||.||+|++..+|..||+|++.+...........+.+|+.+++.++||||+++++++.+.+.+|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999999999999999998765555556677889999999999999999999999999999999999999
Q ss_pred ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccccccC
Q 012988 172 DMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTID 251 (452)
Q Consensus 172 sL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~ 251 (452)
+|..++.....+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++......
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~----------- 149 (328)
T cd05593 81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA----------- 149 (328)
T ss_pred CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcc-----------
Confidence 999999888889999999999999999999999999999999999999999999999999987532100
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhhC
Q 012988 252 DENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVG 331 (452)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~elltG 331 (452)
......+||+.|+|||++.+..++.++|||||||++|+|++|
T Consensus 150 --------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG 191 (328)
T cd05593 150 --------------------------------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 191 (328)
T ss_pred --------------------------------------cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhC
Confidence 011245799999999999999999999999999999999999
Q ss_pred CCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCC--CCHHHHhcCCCcCCCCccccc--cC
Q 012988 332 YPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGT--GGAHQIKAHPWFKDVVWDKLY--EM 406 (452)
Q Consensus 332 ~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~--~~~~eil~hp~f~~~~~~~l~--~~ 406 (452)
+.||.+.+.......+.. ....+|. .+++++.+||.+||. ||.+|++. .++.++++||||.+++|..+. ..
T Consensus 192 ~~Pf~~~~~~~~~~~~~~--~~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~~~~ 267 (328)
T cd05593 192 RLPFYNQDHEKLFELILM--EDIKFPR--TLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQDVYDKKL 267 (328)
T ss_pred CCCCCCCCHHHHHHHhcc--CCccCCC--CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCC
Confidence 999998887777666654 3445554 689999999999999 99999864 279999999999999999885 46
Q ss_pred CCCccccCCCCccCCCCCC
Q 012988 407 EAAFKPEINGELDTQNFMK 425 (452)
Q Consensus 407 ~~~~~p~~~~~~~~~~~~~ 425 (452)
.+++.|.+..+.+..+|..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~ 286 (328)
T cd05593 268 VPPFKPQVTSETDTRYFDE 286 (328)
T ss_pred CCCcCCcCCCcchhhhcCc
Confidence 7888998888888887764
No 47
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-54 Score=410.88 Aligned_cols=267 Identities=37% Similarity=0.666 Sum_probs=230.0
Q ss_pred CCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcc-----------cchHHHHHHHHHHHHHhCCCcee
Q 012988 81 HKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVK-----------RGQVEHVRAERNLLAEVASHCIV 149 (452)
Q Consensus 81 ~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~-----------~~~~~~~~~E~~il~~l~hp~iv 149 (452)
....+++|++++.||+|.||+|-+|++..+++.||||++.+..... ...++.+.+|+.||+++.|||||
T Consensus 92 ~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV 171 (576)
T KOG0585|consen 92 DRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVV 171 (576)
T ss_pred cceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCee
Confidence 4556789999999999999999999999999999999998755432 22357899999999999999999
Q ss_pred eEEEEEEcC--CeEEEEEeecCCCChHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEE
Q 012988 150 KLYYSFQDT--EYLYLIMEYLPGGDMMTLLMREDT-LTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMK 226 (452)
Q Consensus 150 ~l~~~~~~~--~~~~lV~E~~~ggsL~~~l~~~~~-~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ik 226 (452)
+|+++..+. +.+|||+|||..|.+...- ..+. +++.+++.|++.++.||+|||.+|||||||||+|+||+++|++|
T Consensus 172 ~LiEvLDDP~s~~~YlVley~s~G~v~w~p-~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VK 250 (576)
T KOG0585|consen 172 KLIEVLDDPESDKLYLVLEYCSKGEVKWCP-PDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVK 250 (576)
T ss_pred EEEEeecCcccCceEEEEEeccCCccccCC-CCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEE
Confidence 999998764 5799999999988876432 2344 99999999999999999999999999999999999999999999
Q ss_pred EeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchh
Q 012988 227 LSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEV 306 (452)
Q Consensus 227 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~ 306 (452)
|+|||.+..+..+.. .....+ ....+|||.|+|||.
T Consensus 251 IsDFGVs~~~~~~~~---------------------------------~~~d~~-----------L~~tvGTPAF~APE~ 286 (576)
T KOG0585|consen 251 ISDFGVSNEFPQGSD---------------------------------EGSDDQ-----------LSRTVGTPAFFAPEL 286 (576)
T ss_pred eeccceeeecccCCc---------------------------------cccHHH-----------HhhcCCCccccchHh
Confidence 999999886632200 000111 113689999999999
Q ss_pred ccCCC---C-CccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccC
Q 012988 307 LLKKG---Y-GMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRL 381 (452)
Q Consensus 307 ~~~~~---~-~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~ 381 (452)
+.++. + +.+.||||+||+||.|+.|+.||.+....+.+.+|.+ ..+.||..+.+...++|||.+||+ ||..|+
T Consensus 287 c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn--~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri 364 (576)
T KOG0585|consen 287 CSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVN--DPLEFPENPEINEDLKDLIKRLLEKDPEQRI 364 (576)
T ss_pred hcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhc--CcccCCCcccccHHHHHHHHHHhhcChhhee
Confidence 98732 3 6799999999999999999999999999999999997 788999988899999999999999 999999
Q ss_pred CCCCHHHHhcCCCcCC
Q 012988 382 GTGGAHQIKAHPWFKD 397 (452)
Q Consensus 382 ~~~~~~eil~hp~f~~ 397 (452)
++.+|+.|||...
T Consensus 365 ---~l~~ik~Hpwvt~ 377 (576)
T KOG0585|consen 365 ---TLPDIKLHPWVTR 377 (576)
T ss_pred ---ehhhheecceecc
Confidence 9999999999853
No 48
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=6e-53 Score=414.88 Aligned_cols=287 Identities=44% Similarity=0.811 Sum_probs=240.8
Q ss_pred CeeEeceeccCCCeEEEEEEEc---cCCCEEEEEEeecchhcc-cchHHHHHHHHHHHHHh-CCCceeeEEEEEEcCCeE
Q 012988 87 DFELLTIIGRGAFGEVRLCREK---KSGNIYAMKKLKKSEMVK-RGQVEHVRAERNLLAEV-ASHCIVKLYYSFQDTEYL 161 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~---~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~~~ 161 (452)
+|++++.||+|+||+||+|++. .++..||+|++.+..... ....+.+..|+.+++.+ +||+|++++++|.+.+.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 5899999999999999999874 478999999997654332 23346678899999999 589999999999999999
Q ss_pred EEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 162 YLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
|+||||+++|+|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.+....
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~- 159 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEE- 159 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccC-
Confidence 9999999999999999888889999999999999999999999999999999999999999999999999987542110
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC-CCCccchhhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK-GYGMECDWWS 320 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~-~~~~~~DiwS 320 (452)
.......+||+.|+|||++.+. .++.++||||
T Consensus 160 -----------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diws 192 (332)
T cd05614 160 -----------------------------------------------KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWS 192 (332)
T ss_pred -----------------------------------------------CCccccccCCccccCHHHhcCCCCCCCcccccc
Confidence 0112245799999999999865 4789999999
Q ss_pred hhHHHHHhhhCCCCCCCCC----hHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC--CHHHHhcCC
Q 012988 321 LGAIMYEMLVGYPPFYADD----PITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG--GAHQIKAHP 393 (452)
Q Consensus 321 lGvil~elltG~~Pf~~~~----~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~--~~~eil~hp 393 (452)
|||++|+|++|..||.... .......+.. ....+| ..+++.+.+||.+||. ||.+|++.. +++++++||
T Consensus 193 lG~il~elltg~~pf~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~ 268 (332)
T cd05614 193 LGILIFELLTGASPFTLEGERNTQSEVSRRILK--CDPPFP--SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHP 268 (332)
T ss_pred chhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc--CCCCCC--CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCC
Confidence 9999999999999996432 2233333333 222333 3689999999999999 999999876 899999999
Q ss_pred CcCCCCccccc--cCCCCccccCCCCccCCCCCC
Q 012988 394 WFKDVVWDKLY--EMEAAFKPEINGELDTQNFMK 425 (452)
Q Consensus 394 ~f~~~~~~~l~--~~~~~~~p~~~~~~~~~~~~~ 425 (452)
||++++|..+. +..+++.|.+....+..+|..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (332)
T cd05614 269 FFKGLDWEALALRKVNPPFRPSIRNELDVGNFAE 302 (332)
T ss_pred CcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCc
Confidence 99999998875 577889999988888888865
No 49
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=4.1e-53 Score=407.16 Aligned_cols=277 Identities=32% Similarity=0.606 Sum_probs=232.1
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
.|++++.||+|+||+||+|.+..+|+.||+|++.+...........+.+|+.+++.++|++|+++++++.+.+.+|+|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 38899999999999999999999999999999987654444444567889999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 167 YLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 167 ~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
|+++|+|..++... ..+++..+..++.|++.||.|||+.||+||||||+|||++.++.+||+|||++.......
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 156 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE---- 156 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC----
Confidence 99999999887543 468999999999999999999999999999999999999999999999999987542110
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHH
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 324 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvi 324 (452)
......||+.|+|||++.+..++.++|||||||+
T Consensus 157 ----------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvi 190 (285)
T cd05631 157 ----------------------------------------------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCL 190 (285)
T ss_pred ----------------------------------------------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHH
Confidence 0113469999999999999999999999999999
Q ss_pred HHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCC--CCHHHHhcCCCcCCCCcc
Q 012988 325 MYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGT--GGAHQIKAHPWFKDVVWD 401 (452)
Q Consensus 325 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~--~~~~eil~hp~f~~~~~~ 401 (452)
+|+|++|+.||.+.+.......+.........+....++.++.+||++||. ||.+|++. .+++++++||||.+++|+
T Consensus 191 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~ 270 (285)
T cd05631 191 IYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFK 270 (285)
T ss_pred HHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHH
Confidence 999999999998765433222222211111222223689999999999999 99999953 259999999999999999
Q ss_pred cccc--CCCCcccc
Q 012988 402 KLYE--MEAAFKPE 413 (452)
Q Consensus 402 ~l~~--~~~~~~p~ 413 (452)
.+.. +++||+|.
T Consensus 271 ~~~~~~~~~~~~~~ 284 (285)
T cd05631 271 RLEANMLEPPFCPD 284 (285)
T ss_pred HHHhCcCCcCCCCC
Confidence 9964 68899885
No 50
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=7.2e-53 Score=412.77 Aligned_cols=282 Identities=40% Similarity=0.740 Sum_probs=246.3
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeecCCC
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGG 171 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~gg 171 (452)
+.||+|+||.||+|+++.+|..||+|++.+...........+.+|+.+++.++||||++++++|...+.+|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999999999999999998765444455667788999999999999999999999999999999999999
Q ss_pred ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccccccC
Q 012988 172 DMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTID 251 (452)
Q Consensus 172 sL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~ 251 (452)
+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++......
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~----------- 149 (323)
T cd05595 81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG----------- 149 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCC-----------
Confidence 999999888899999999999999999999999999999999999999999999999999987431100
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhhC
Q 012988 252 DENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVG 331 (452)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~elltG 331 (452)
......+||+.|+|||++.+..++.++|||||||++|+|++|
T Consensus 150 --------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g 191 (323)
T cd05595 150 --------------------------------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 191 (323)
T ss_pred --------------------------------------CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhC
Confidence 001235699999999999999999999999999999999999
Q ss_pred CCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCC--CCHHHHhcCCCcCCCCccccc--cC
Q 012988 332 YPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGT--GGAHQIKAHPWFKDVVWDKLY--EM 406 (452)
Q Consensus 332 ~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~--~~~~eil~hp~f~~~~~~~l~--~~ 406 (452)
+.||.+.+.......+.. ....+|. .+++++.+||.+||. ||.+|++. .++.++++||||.+++|..+. .+
T Consensus 192 ~~Pf~~~~~~~~~~~~~~--~~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~ 267 (323)
T cd05595 192 RLPFYNQDHERLFELILM--EEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKL 267 (323)
T ss_pred CCCCCCCCHHHHHHHHhc--CCCCCCC--CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCHHHHHhCCC
Confidence 999998888777777664 3344554 689999999999999 99999864 279999999999999999885 45
Q ss_pred CCCccccCCCCccCCCCCCC
Q 012988 407 EAAFKPEINGELDTQNFMKF 426 (452)
Q Consensus 407 ~~~~~p~~~~~~~~~~~~~~ 426 (452)
.+++.|.+....+...|+..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~ 287 (323)
T cd05595 268 LPPFKPQVTSEVDTRYFDDE 287 (323)
T ss_pred CCCcCCCCCChhhhhhcCcc
Confidence 68899999888888887643
No 51
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=8.2e-53 Score=412.55 Aligned_cols=288 Identities=39% Similarity=0.717 Sum_probs=247.5
Q ss_pred eeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHH---HHhCCCceeeEEEEEEcCCeEEEE
Q 012988 88 FELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLL---AEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 88 y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il---~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
|++++.||+|+||.||+|.+..+|+.||||++++.........+.+.+|+.++ +.++||||+++++++.+.+.+|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 78899999999999999999999999999999876544455566777777765 456799999999999999999999
Q ss_pred EeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 165 MEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
|||++||+|..++. .+.+++..+..++.|++.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 81 ~E~~~~~~L~~~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~----- 154 (324)
T cd05589 81 MEYAAGGDLMMHIH-TDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF----- 154 (324)
T ss_pred EcCCCCCcHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC-----
Confidence 99999999998875 457999999999999999999999999999999999999999999999999998743210
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHH
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 324 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvi 324 (452)
.......+||+.|+|||++.+..++.++|||||||+
T Consensus 155 --------------------------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~i 190 (324)
T cd05589 155 --------------------------------------------GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVL 190 (324)
T ss_pred --------------------------------------------CCcccccccCccccCHhHhcCCCCCcccchhhHHHH
Confidence 001124579999999999999999999999999999
Q ss_pred HHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC--CHHHHhcCCCcCCCCcc
Q 012988 325 MYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG--GAHQIKAHPWFKDVVWD 401 (452)
Q Consensus 325 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~--~~~eil~hp~f~~~~~~ 401 (452)
+|+|++|..||.+.+.......+... ...+|. .+++.+.+||.+||. ||.+|++.. ++.++++||||++++|.
T Consensus 191 l~el~~G~~pf~~~~~~~~~~~i~~~--~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~~ 266 (324)
T cd05589 191 IYEMLVGESPFPGDDEEEVFDSIVND--EVRYPR--FLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINWD 266 (324)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCC--CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCHH
Confidence 99999999999998888887777653 334443 689999999999999 999999753 79999999999999998
Q ss_pred ccc--cCCCCccccCCCCccCCCCCCCCCC
Q 012988 402 KLY--EMEAAFKPEINGELDTQNFMKFDEL 429 (452)
Q Consensus 402 ~l~--~~~~~~~p~~~~~~~~~~~~~~~~~ 429 (452)
.+. ...+++.|.+....|.++|......
T Consensus 267 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 296 (324)
T cd05589 267 DLLARKIKPPFVPTIKGPEDVSNFDEEFTS 296 (324)
T ss_pred HHHhCCCCcCccCCCCCcchhhhcCccccc
Confidence 874 4678899999988898888754333
No 52
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.2e-52 Score=411.17 Aligned_cols=290 Identities=36% Similarity=0.688 Sum_probs=249.7
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEEcCCeEEEEE
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
+|++++.||+|+||+||+|.+..++..||+|++.+..............|..++..+ +|++|+++++++.+.+.+|+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 589999999999999999999999999999999876544445556677788888877 5789999999999999999999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
||+++|+|..++...+.+++..+..++.|++.||.|||++||+||||||+|||++.+|.+||+|||+++......
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~----- 155 (323)
T cd05616 81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG----- 155 (323)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCC-----
Confidence 999999999999888899999999999999999999999999999999999999999999999999987432100
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 325 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil 325 (452)
......+||+.|+|||++.+..++.++|||||||++
T Consensus 156 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 191 (323)
T cd05616 156 --------------------------------------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLL 191 (323)
T ss_pred --------------------------------------------CccccCCCChhhcCHHHhcCCCCCCccchhchhHHH
Confidence 011245799999999999999999999999999999
Q ss_pred HHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC--CHHHHhcCCCcCCCCccc
Q 012988 326 YEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG--GAHQIKAHPWFKDVVWDK 402 (452)
Q Consensus 326 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~--~~~eil~hp~f~~~~~~~ 402 (452)
|+|++|+.||.+.+.......+.. ....+|. .++.++.+||.+||. ||.+|++.. ...+++.||||+.++|..
T Consensus 192 ~elltg~~Pf~~~~~~~~~~~i~~--~~~~~p~--~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~~~ 267 (323)
T cd05616 192 YEMLAGQAPFEGEDEDELFQSIME--HNVAYPK--SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEK 267 (323)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHh--CCCCCCC--cCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCCHHH
Confidence 999999999999888888877775 3344554 689999999999999 999999642 478999999999999999
Q ss_pred cc--cCCCCccccCCCCccCCCCCCCCCCC
Q 012988 403 LY--EMEAAFKPEINGELDTQNFMKFDELD 430 (452)
Q Consensus 403 l~--~~~~~~~p~~~~~~~~~~~~~~~~~~ 430 (452)
+. ...+|+.|.... .|..+|+.+....
T Consensus 268 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 296 (323)
T cd05616 268 LERKEVQPPYKPKACG-RDAENFDKFFTRH 296 (323)
T ss_pred HHhCCCCCCcCCcCCC-chhhhcCchhccC
Confidence 85 477888887653 6777777766543
No 53
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.2e-52 Score=410.99 Aligned_cols=282 Identities=39% Similarity=0.705 Sum_probs=245.4
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEEcCCeEEEEEeecCC
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQDTEYLYLIMEYLPG 170 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~~~~lV~E~~~g 170 (452)
+.||+|+||+||+|+++.+++.||+|++.+...........+..|..++..+ +||||++++++|.+.+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 4699999999999999999999999999876554555566777889998876 799999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcccccc
Q 012988 171 GDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTI 250 (452)
Q Consensus 171 gsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~ 250 (452)
|+|..++...+.+++..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~----------- 149 (321)
T cd05591 81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN----------- 149 (321)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccC-----------
Confidence 999999988889999999999999999999999999999999999999999999999999998753211
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhh
Q 012988 251 DDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 330 (452)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ellt 330 (452)
.......+||+.|+|||++.+..++.++|||||||++|+|++
T Consensus 150 --------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t 191 (321)
T cd05591 150 --------------------------------------GVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMA 191 (321)
T ss_pred --------------------------------------CccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhc
Confidence 001124579999999999999999999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC----CHHHHhcCCCcCCCCccccc-
Q 012988 331 GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG----GAHQIKAHPWFKDVVWDKLY- 404 (452)
Q Consensus 331 G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~----~~~eil~hp~f~~~~~~~l~- 404 (452)
|+.||.+.+....+..+.. ....+|. .++.++.+||.+||. ||.+|++.. ++.++++||||.+++|..+.
T Consensus 192 g~~Pf~~~~~~~~~~~i~~--~~~~~p~--~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~~~~~~ 267 (321)
T cd05591 192 GQPPFEADNEDDLFESILH--DDVLYPV--WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDWVLLEQ 267 (321)
T ss_pred CCCCCCCCCHHHHHHHHHc--CCCCCCC--CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCCHHHHHh
Confidence 9999999998888888875 3344443 588999999999999 999999642 78999999999999999885
Q ss_pred -cCCCCccccCCCCccCCCCCCC
Q 012988 405 -EMEAAFKPEINGELDTQNFMKF 426 (452)
Q Consensus 405 -~~~~~~~p~~~~~~~~~~~~~~ 426 (452)
...++|.|.+....+..+|+..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~ 290 (321)
T cd05591 268 RKIKPPFKPKIKTKRDVNNFDQD 290 (321)
T ss_pred CCCCCCCCCCCCCcchhhhcCCc
Confidence 4677889988887787777653
No 54
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.2e-53 Score=408.78 Aligned_cols=262 Identities=31% Similarity=0.465 Sum_probs=227.2
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC--Ce
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT--EY 160 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~--~~ 160 (452)
...+.|+.+++||+|+||.||+|++..||+.||+|++..... +........+|+.||++|+||||++|.+...+. +.
T Consensus 114 r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~-~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~s 192 (560)
T KOG0600|consen 114 RRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE-KEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGS 192 (560)
T ss_pred cchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccC-CCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCce
Confidence 345779999999999999999999999999999999976542 445566778999999999999999999998776 68
Q ss_pred EEEEEeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 161 LYLIMEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 161 ~~lV~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
+|||+|||+. ||.-++... -.|++.+++.|+.||+.||+|+|.+||+|||||.+|||||.+|.+||+|||||+.+...
T Consensus 193 iYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 193 IYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPS 271 (560)
T ss_pred EEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCC
Confidence 9999999965 888888663 47999999999999999999999999999999999999999999999999999976422
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchh
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDW 318 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~Di 318 (452)
. ....++.+-|++|+|||++++ ..|+.++|+
T Consensus 272 ~------------------------------------------------~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDl 303 (560)
T KOG0600|consen 272 G------------------------------------------------SAPYTSRVVTLWYRPPELLLGATSYGTAVDL 303 (560)
T ss_pred C------------------------------------------------CcccccceEEeeccChHHhcCCcccccceee
Confidence 1 122446788999999999998 679999999
Q ss_pred hhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccC--------cccCCC-----------------CCCCChhHHHHHHHh
Q 012988 319 WSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRN--------HLKFPD-----------------DSKLSPEAKDLICRL 373 (452)
Q Consensus 319 wSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~--------~~~~p~-----------------~~~~s~~~~dLi~~m 373 (452)
||+||||.||++|++.|.+.+..+++..|++.-+ ...+|. ...+++.+.+|+..|
T Consensus 304 WS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~l 383 (560)
T KOG0600|consen 304 WSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKL 383 (560)
T ss_pred hhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHH
Confidence 9999999999999999999999999999987222 112221 124689999999999
Q ss_pred hc-CccccCCCCCHHHHhcCCCcCC
Q 012988 374 LC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 374 L~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
|+ ||.+|. ||.++|.|+||..
T Consensus 384 L~ldP~kR~---tA~~aL~seyF~t 405 (560)
T KOG0600|consen 384 LSLDPDKRG---TASSALQSEYFTT 405 (560)
T ss_pred hccCccccc---cHHHHhcCccccc
Confidence 99 999999 9999999999943
No 55
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=2.4e-52 Score=407.80 Aligned_cols=281 Identities=37% Similarity=0.680 Sum_probs=241.5
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEEcCCeEEEEEeecCC
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQDTEYLYLIMEYLPG 170 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~~~~lV~E~~~g 170 (452)
+.||+|+||.||+|+++.+|..||+|++++..............|..++..+ +||||++++++|.+.+++|+||||++|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 4799999999999999999999999999876544344456677788888764 899999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcccccc
Q 012988 171 GDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTI 250 (452)
Q Consensus 171 gsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~ 250 (452)
|+|..++.....+++..+..++.|++.||+|||++||+||||||+|||++.+|.+||+|||+++......
T Consensus 81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------- 150 (316)
T cd05620 81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD---------- 150 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCC----------
Confidence 9999999888889999999999999999999999999999999999999999999999999987421100
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhh
Q 012988 251 DDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 330 (452)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ellt 330 (452)
......+||+.|+|||++.+..++.++|||||||++|+|++
T Consensus 151 ---------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~ 191 (316)
T cd05620 151 ---------------------------------------NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLI 191 (316)
T ss_pred ---------------------------------------CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHh
Confidence 01124579999999999999999999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCH-HHHhcCCCcCCCCccccc--cC
Q 012988 331 GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGA-HQIKAHPWFKDVVWDKLY--EM 406 (452)
Q Consensus 331 G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~-~eil~hp~f~~~~~~~l~--~~ 406 (452)
|..||.+.+.......+.. ....+|. .++.++++||.+||. ||.+|+ ++ .++++||||++++|..+. +.
T Consensus 192 g~~Pf~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~li~~~l~~dP~~R~---~~~~~~~~h~~f~~~~~~~~~~~~~ 264 (316)
T cd05620 192 GQSPFHGDDEDELFESIRV--DTPHYPR--WITKESKDILEKLFERDPTRRL---GVVGNIRGHPFFKTINWTALEKREL 264 (316)
T ss_pred CCCCCCCCCHHHHHHHHHh--CCCCCCC--CCCHHHHHHHHHHccCCHHHcC---CChHHHHcCCCcCCCCHHHHHhCCC
Confidence 9999998888777776654 2334443 588999999999999 999999 65 689999999999999874 46
Q ss_pred CCCccccCCCCccCCCCCCCCC
Q 012988 407 EAAFKPEINGELDTQNFMKFDE 428 (452)
Q Consensus 407 ~~~~~p~~~~~~~~~~~~~~~~ 428 (452)
.+++.|....+.+..+|.+...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~ 286 (316)
T cd05620 265 DPPFKPKVKSPSDYSNFDREFL 286 (316)
T ss_pred CCCcCCCCCCcchhhhcCcccc
Confidence 7889999988888888876433
No 56
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3.1e-52 Score=407.04 Aligned_cols=291 Identities=37% Similarity=0.684 Sum_probs=246.8
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEEcCCeEEEEEeecCC
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQDTEYLYLIMEYLPG 170 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~~~~lV~E~~~g 170 (452)
+.||+|+||+||+|.+..+++.||+|++++.........+....|..++..+ +||||+++++++...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999999999999999999876544444455566677777654 899999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcccccc
Q 012988 171 GDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTI 250 (452)
Q Consensus 171 gsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~ 250 (452)
|+|..++...+.+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~---------- 150 (316)
T cd05592 81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE---------- 150 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC----------
Confidence 9999999888899999999999999999999999999999999999999999999999999987542110
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhh
Q 012988 251 DDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 330 (452)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ellt 330 (452)
......+||+.|+|||++.+..++.++|||||||++|+|++
T Consensus 151 ---------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~ 191 (316)
T cd05592 151 ---------------------------------------GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLI 191 (316)
T ss_pred ---------------------------------------CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHh
Confidence 01124579999999999999999999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCC-HHHHhcCCCcCCCCccccc--cC
Q 012988 331 GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGG-AHQIKAHPWFKDVVWDKLY--EM 406 (452)
Q Consensus 331 G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~-~~eil~hp~f~~~~~~~l~--~~ 406 (452)
|..||.+.+....+..+.. ....+|. .++.++.+||.+||. ||.+|+ + ..+++.||||+.++|..+. +.
T Consensus 192 G~~Pf~~~~~~~~~~~i~~--~~~~~~~--~~~~~~~~ll~~~l~~~P~~R~---~~~~~l~~h~~~~~~~~~~~~~~~~ 264 (316)
T cd05592 192 GQSPFHGEDEDELFDSILN--DRPHFPR--WISKEAKDCLSKLFERDPTKRL---GVDGDIRQHPFFRGIDWERLEKREI 264 (316)
T ss_pred CCCCCCCCCHHHHHHHHHc--CCCCCCC--CCCHHHHHHHHHHccCCHHHcC---CChHHHHcCcccCCCCHHHHHhCCC
Confidence 9999999888777777764 2333443 688999999999999 999999 5 4589999999999998875 46
Q ss_pred CCCccccCCCCccCCCCCCCCCCCCCCCCCCC
Q 012988 407 EAAFKPEINGELDTQNFMKFDELDPPASGRTS 438 (452)
Q Consensus 407 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (452)
.+++.|......+..+|+.....+....++..
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (316)
T cd05592 265 PPPFKPKVKSPSDASNFDREFTNEKVRLSPVD 296 (316)
T ss_pred CCCcCCCCCCcchhhhcCcccccccccCCCcc
Confidence 78899999988899999866555544444433
No 57
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=3.9e-52 Score=407.63 Aligned_cols=281 Identities=41% Similarity=0.759 Sum_probs=241.7
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHH-HHHHhCCCceeeEEEEEEcCCeEEEEEeecCC
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERN-LLAEVASHCIVKLYYSFQDTEYLYLIMEYLPG 170 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~-il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~g 170 (452)
+.||+|+||+||+|+++.+|+.||+|++.+...........+..|.. +++.++||||+++++++.+.+.+|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999999999999999998765444444455555655 56789999999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcccccc
Q 012988 171 GDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTI 250 (452)
Q Consensus 171 gsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~ 250 (452)
|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~----------- 149 (323)
T cd05575 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH----------- 149 (323)
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC-----------
Confidence 999999988889999999999999999999999999999999999999999999999999998743110
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhh
Q 012988 251 DDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 330 (452)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ellt 330 (452)
.......+||+.|+|||++.+..++.++|||||||++|+|++
T Consensus 150 --------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~ 191 (323)
T cd05575 150 --------------------------------------SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLY 191 (323)
T ss_pred --------------------------------------CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhc
Confidence 001124579999999999999999999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC-CHHHHhcCCCcCCCCccccc--cC
Q 012988 331 GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG-GAHQIKAHPWFKDVVWDKLY--EM 406 (452)
Q Consensus 331 G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~-~~~eil~hp~f~~~~~~~l~--~~ 406 (452)
|..||.+.+..+.+..+... ...++ ..++..+.+||.+||. ||.+|++.. .+.+++.||||..++|..+. ++
T Consensus 192 g~~pf~~~~~~~~~~~i~~~--~~~~~--~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~~~~~~~~~ 267 (323)
T cd05575 192 GLPPFYSRDTAEMYDNILNK--PLRLK--PNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINWDDLVNKKI 267 (323)
T ss_pred CCCCCCCCCHHHHHHHHHcC--CCCCC--CCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCHHHHhhccC
Confidence 99999998888887777653 33333 3579999999999999 999999642 56899999999999999985 57
Q ss_pred CCCccccCCCCccCCCCCC
Q 012988 407 EAAFKPEINGELDTQNFMK 425 (452)
Q Consensus 407 ~~~~~p~~~~~~~~~~~~~ 425 (452)
.+|+.|.+....+.+.|+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~ 286 (323)
T cd05575 268 TPPFNPNVSGPMDLKHFDP 286 (323)
T ss_pred CCCcCCCCCCcchhhhcCc
Confidence 7889999888888888865
No 58
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=6.1e-54 Score=416.18 Aligned_cols=254 Identities=33% Similarity=0.602 Sum_probs=230.9
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|-+...||+|+||.||+|+.+.+.+.||+|.+.|..- ....+..+.+|++|++.++|||||.++++|+...++++|.
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr-~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt 80 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR-NEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT 80 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCC-chHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence 578999999999999999999999999999999987643 2334677999999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
|||.| +|..+|...+.++|+.++.++.+++.||.|||+++|+|||+||.|||++.+|++|+||||+|+.....+
T Consensus 81 e~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t----- 154 (808)
T KOG0597|consen 81 EYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT----- 154 (808)
T ss_pred hhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCc-----
Confidence 99966 999999999999999999999999999999999999999999999999999999999999999764221
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 325 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil 325 (452)
...+.+.|||.|||||++.+.+|+..+|+||||||+
T Consensus 155 --------------------------------------------~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcil 190 (808)
T KOG0597|consen 155 --------------------------------------------SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCIL 190 (808)
T ss_pred --------------------------------------------eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHH
Confidence 123467799999999999999999999999999999
Q ss_pred HHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 326 YEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 326 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
|||++|++||...+-......|.. .+...|. ..|..+..||+.+|. ||..|+ ++.+++.|||.++
T Consensus 191 YE~~~G~PPF~a~si~~Lv~~I~~--d~v~~p~--~~S~~f~nfl~gLL~kdP~~Rl---tW~~Ll~HpF~k~ 256 (808)
T KOG0597|consen 191 YELYVGQPPFYARSITQLVKSILK--DPVKPPS--TASSSFVNFLQGLLIKDPAQRL---TWTDLLGHPFWKG 256 (808)
T ss_pred HHHhcCCCCchHHHHHHHHHHHhc--CCCCCcc--cccHHHHHHHHHHhhcChhhcc---cHHHHhcChHHhh
Confidence 999999999999888888888876 4555554 799999999999998 999999 9999999999986
No 59
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=4.5e-52 Score=408.14 Aligned_cols=291 Identities=35% Similarity=0.654 Sum_probs=242.3
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEEcCCeEEEEEeecCC
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQDTEYLYLIMEYLPG 170 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~~~~lV~E~~~g 170 (452)
+.||+|+||+||+|++..+++.||+|++++...........+..|+.++..+ +||||++++++|.+.+.+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4699999999999999999999999999876554455566788999999988 799999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcccccc
Q 012988 171 GDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTI 250 (452)
Q Consensus 171 gsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~ 250 (452)
|+|..++...+.+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~----------- 149 (329)
T cd05588 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP----------- 149 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccC-----------
Confidence 999999988889999999999999999999999999999999999999999999999999998742100
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhh
Q 012988 251 DDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 330 (452)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ellt 330 (452)
.......+||+.|+|||++.+..++.++|||||||++|+|++
T Consensus 150 --------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~ 191 (329)
T cd05588 150 --------------------------------------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA 191 (329)
T ss_pred --------------------------------------CCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHH
Confidence 001124579999999999999999999999999999999999
Q ss_pred CCCCCCCCC--------hHH-HHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCC---CCHHHHhcCCCcCC
Q 012988 331 GYPPFYADD--------PIT-TCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGT---GGAHQIKAHPWFKD 397 (452)
Q Consensus 331 G~~Pf~~~~--------~~~-~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~---~~~~eil~hp~f~~ 397 (452)
|+.||.... ... ....+.. ....+|. .++.++.+||.+||+ ||.+|++. .++.++++||||.+
T Consensus 192 g~~Pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~ 267 (329)
T cd05588 192 GRSPFDIVGMSDNPDQNTEDYLFQVILE--KQIRIPR--SLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN 267 (329)
T ss_pred CCCCcccccccccccccchHHHHHHHHc--CCCCCCC--CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 999996321 111 2233332 3344554 689999999999999 99999953 25899999999999
Q ss_pred CCccccc--cCCCCccccCCCCccCCCCCCCCCCCCCCCC
Q 012988 398 VVWDKLY--EMEAAFKPEINGELDTQNFMKFDELDPPASG 435 (452)
Q Consensus 398 ~~~~~l~--~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 435 (452)
++|..+. +..+++.|.+....+..+|......+....+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (329)
T cd05588 268 IDWDLLEQKQVLPPYKPNIESDRDLDNFDPQFTDEPVQLT 307 (329)
T ss_pred CCHHHHHhCCCCCCccccCCCcchhhhcCCccccCccccC
Confidence 9999885 4667888888888787888765544433333
No 60
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=3.6e-52 Score=408.16 Aligned_cols=282 Identities=41% Similarity=0.753 Sum_probs=244.0
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeecCCC
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGG 171 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~gg 171 (452)
+.||+|+||+||+|.+..+|..||+|++.+...........+..|+.+++.++||||++++++|.+.+.+|+||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999999999999999998765544555667788999999999999999999999999999999999999
Q ss_pred ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcccccc
Q 012988 172 DMMTLLMREDTLTENVARFYIAQSVLAIESIHK-HNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTI 250 (452)
Q Consensus 172 sL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~-~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~ 250 (452)
+|..++.....+++..++.++.||+.||.|||+ .||+||||||+|||++.+|.+||+|||+++......
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~---------- 150 (325)
T cd05594 81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---------- 150 (325)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC----------
Confidence 999999888899999999999999999999997 799999999999999999999999999987432100
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhh
Q 012988 251 DDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 330 (452)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ellt 330 (452)
......+||+.|+|||++.+..++.++|||||||++|+|++
T Consensus 151 ---------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t 191 (325)
T cd05594 151 ---------------------------------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 191 (325)
T ss_pred ---------------------------------------cccccccCCcccCCHHHHccCCCCCccccccccceeeeecc
Confidence 01123569999999999999999999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCC--CCHHHHhcCCCcCCCCccccc--c
Q 012988 331 GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGT--GGAHQIKAHPWFKDVVWDKLY--E 405 (452)
Q Consensus 331 G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~--~~~~eil~hp~f~~~~~~~l~--~ 405 (452)
|..||.+.+.......+.. ....+|. .+++++.+||.+||. ||.+|++. .++.++++||||.++.|.... .
T Consensus 192 G~~Pf~~~~~~~~~~~i~~--~~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~~~ 267 (325)
T cd05594 192 GRLPFYNQDHEKLFELILM--EEIRFPR--TLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQDVYEKK 267 (325)
T ss_pred CCCCCCCCCHHHHHHHHhc--CCCCCCC--CCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCHHHHHhCC
Confidence 9999998887777766654 3445554 689999999999999 99999854 279999999999999999875 3
Q ss_pred CCCCccccCCCCccCCCCCCC
Q 012988 406 MEAAFKPEINGELDTQNFMKF 426 (452)
Q Consensus 406 ~~~~~~p~~~~~~~~~~~~~~ 426 (452)
..+++.|......+..+|+..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~ 288 (325)
T cd05594 268 LVPPFKPQVTSETDTRYFDEE 288 (325)
T ss_pred CCCCcCCcCCCcchhhhcCch
Confidence 567888888877787777643
No 61
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.9e-55 Score=391.60 Aligned_cols=250 Identities=34% Similarity=0.581 Sum_probs=219.6
Q ss_pred CCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEE-EEEcCC
Q 012988 81 HKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYY-SFQDTE 159 (452)
Q Consensus 81 ~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~-~~~~~~ 159 (452)
...++.+|+|+++||.|+||+||++.+..+|..+|.|.+.-. .......+....|+.+|++|+|||||++++ .|.++.
T Consensus 14 ~~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~-~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~ 92 (375)
T KOG0591|consen 14 PQKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFG-MMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDN 92 (375)
T ss_pred CcccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchh-hccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccc
Confidence 455667899999999999999999999999999999999743 444555677889999999999999999998 565555
Q ss_pred e-EEEEEeecCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH--CC--eeecCCCCCcEEECCCCcEEEeec
Q 012988 160 Y-LYLIMEYLPGGDMMTLLMR----EDTLTENVARFYIAQSVLAIESIHK--HN--YIHRDIKPDNLLLDKNGHMKLSDF 230 (452)
Q Consensus 160 ~-~~lV~E~~~ggsL~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~--~g--ivHrDlkp~NILl~~~g~ikl~DF 230 (452)
. ++||||||.+|+|..+++. .+.++|..++.|+.|++.||..+|. .. |+||||||.||+|+.+|.+||+||
T Consensus 93 evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDf 172 (375)
T KOG0591|consen 93 EVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDF 172 (375)
T ss_pred hhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccc
Confidence 5 9999999999999999854 4679999999999999999999999 44 999999999999999999999999
Q ss_pred cCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC
Q 012988 231 GLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK 310 (452)
Q Consensus 231 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~ 310 (452)
||++.+.... ..+.+.+|||.||+||.+...
T Consensus 173 GL~r~l~s~~-------------------------------------------------tfA~S~VGTPyYMSPE~i~~~ 203 (375)
T KOG0591|consen 173 GLGRFLSSKT-------------------------------------------------TFAHSLVGTPYYMSPERIHES 203 (375)
T ss_pred hhHhHhcchh-------------------------------------------------HHHHhhcCCCcccCHHHHhcC
Confidence 9999875332 224478999999999999999
Q ss_pred CCCccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCC
Q 012988 311 GYGMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLG 382 (452)
Q Consensus 311 ~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~ 382 (452)
+|+.++||||+||++|||+.-++||.+.+-.+...+|.++ ...+.|. ..+|.++..||..|++ ||..||+
T Consensus 204 ~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qg-d~~~~p~-~~YS~~l~~li~~ci~vd~~~RP~ 274 (375)
T KOG0591|consen 204 GYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQG-DYPPLPD-EHYSTDLRELINMCIAVDPEQRPD 274 (375)
T ss_pred CCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcC-CCCCCcH-HHhhhHHHHHHHHHccCCcccCCC
Confidence 9999999999999999999999999999999999999875 2223443 3789999999999999 9999995
No 62
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=7e-52 Score=406.76 Aligned_cols=303 Identities=36% Similarity=0.648 Sum_probs=247.3
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEEcCCeEEEEEeecCC
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQDTEYLYLIMEYLPG 170 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~~~~lV~E~~~g 170 (452)
+.||+|+||+||+|.++.+++.||+|++.+...........+.+|+.++..+ +||||+++++++.+.+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4699999999999999999999999999876544445566788899988876 799999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcccccc
Q 012988 171 GDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTI 250 (452)
Q Consensus 171 gsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~ 250 (452)
|+|..++...+.+++..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~----------- 149 (329)
T cd05618 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP----------- 149 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCC-----------
Confidence 999999988889999999999999999999999999999999999999999999999999998743110
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhh
Q 012988 251 DDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 330 (452)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ellt 330 (452)
.......+||+.|+|||++.+..++.++|||||||++|+|++
T Consensus 150 --------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~ 191 (329)
T cd05618 150 --------------------------------------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA 191 (329)
T ss_pred --------------------------------------CCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhh
Confidence 001124579999999999999999999999999999999999
Q ss_pred CCCCCCCC--------C-hHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCC---CCHHHHhcCCCcCC
Q 012988 331 GYPPFYAD--------D-PITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGT---GGAHQIKAHPWFKD 397 (452)
Q Consensus 331 G~~Pf~~~--------~-~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~---~~~~eil~hp~f~~ 397 (452)
|..||... . .......+.. ....+|. .++..+.+||.+||. ||.+|++. .++.++++||||++
T Consensus 192 g~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~--~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~ 267 (329)
T cd05618 192 GRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPR--SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 267 (329)
T ss_pred CCCCCccCCCcCCcccccHHHHHHHHhc--CCCCCCC--CCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 99999521 1 1112233332 3344554 688999999999999 99999953 24789999999999
Q ss_pred CCccccc--cCCCCccccCCCCccCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 012988 398 VVWDKLY--EMEAAFKPEINGELDTQNFMKFDELDPPASGRTSSGPSRKVCN 447 (452)
Q Consensus 398 ~~~~~l~--~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (452)
++|..+. +..+++.|.+.+..+..+|......++...++..+...+..|.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (329)
T cd05618 268 VDWDLMEQKQVVPPFKPNISGEFGLDNFDAQFTNEPVQLTPDDDDIVRKIDQ 319 (329)
T ss_pred CCHHHHHcCCCCcCccCCCCCcccchhcCcccccCCccCCCCcccccccccc
Confidence 9998774 4778899998888888888765444444444444444444443
No 63
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1e-51 Score=404.56 Aligned_cols=290 Identities=37% Similarity=0.712 Sum_probs=248.5
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhC-CCceeeEEEEEEcCCeEEEEE
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVA-SHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~~~~~~~lV~ 165 (452)
+|++.+.||+|+||+||+|+++.+|+.||+|++.+...........+..|+.++..+. |++|+++++++.+.+.+|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4889999999999999999999999999999998765544555667788999998886 567888999999999999999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
||++||+|..++...+.+++..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+++......
T Consensus 81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~----- 155 (323)
T cd05615 81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG----- 155 (323)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCC-----
Confidence 999999999999888899999999999999999999999999999999999999999999999999987532110
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 325 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil 325 (452)
......+||+.|+|||++.+..++.++|||||||++
T Consensus 156 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil 191 (323)
T cd05615 156 --------------------------------------------VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLL 191 (323)
T ss_pred --------------------------------------------ccccCccCCccccCHHHHcCCCCCCccchhhhHHHH
Confidence 011235699999999999999999999999999999
Q ss_pred HHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC--CHHHHhcCCCcCCCCccc
Q 012988 326 YEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG--GAHQIKAHPWFKDVVWDK 402 (452)
Q Consensus 326 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~--~~~eil~hp~f~~~~~~~ 402 (452)
|+|++|..||.+.+.......+.. ....+|. .++.++.+||.+||. ||.+|++.. ...++++||||+.++|..
T Consensus 192 ~elltG~~pf~~~~~~~~~~~i~~--~~~~~p~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~~~ 267 (323)
T cd05615 192 YEMLAGQPPFDGEDEDELFQSIME--HNVSYPK--SLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDWDK 267 (323)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHh--CCCCCCc--cCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCHHH
Confidence 999999999999888887777765 3344554 688999999999999 999999653 478999999999999998
Q ss_pred cc--cCCCCccccCCCCccCCCCCCCCCCC
Q 012988 403 LY--EMEAAFKPEINGELDTQNFMKFDELD 430 (452)
Q Consensus 403 l~--~~~~~~~p~~~~~~~~~~~~~~~~~~ 430 (452)
+. ...+|+.|..... ..++|+++....
T Consensus 268 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 296 (323)
T cd05615 268 LENREIQPPFKPKVCGK-GAENFDKFFTRG 296 (323)
T ss_pred HhcCCCCcCccCccCCC-chhhcCcccccc
Confidence 85 4678888876553 577887766443
No 64
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=8.3e-52 Score=403.95 Aligned_cols=288 Identities=36% Similarity=0.674 Sum_probs=246.6
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEEcCCeEEEEEeecCC
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQDTEYLYLIMEYLPG 170 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~~~~lV~E~~~g 170 (452)
+.||+|+||+||+|++..+++.||||++.+..............|..++..+ +||||+++++++.+.+.+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999999999999999999876543344455667788888764 899999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcccccc
Q 012988 171 GDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTI 250 (452)
Q Consensus 171 gsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~ 250 (452)
|+|..++.....+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------- 150 (316)
T cd05619 81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD---------- 150 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC----------
Confidence 9999999887889999999999999999999999999999999999999999999999999987431100
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhh
Q 012988 251 DDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 330 (452)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ellt 330 (452)
......+||+.|+|||++.+..++.++|||||||++|+|++
T Consensus 151 ---------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~ 191 (316)
T cd05619 151 ---------------------------------------AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLI 191 (316)
T ss_pred ---------------------------------------CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHh
Confidence 01124579999999999999999999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHH-HHhcCCCcCCCCccccc--cC
Q 012988 331 GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAH-QIKAHPWFKDVVWDKLY--EM 406 (452)
Q Consensus 331 G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~-eil~hp~f~~~~~~~l~--~~ 406 (452)
|..||.+.+..+....+... ...+|. .++.++++||.+||. ||.+|+ ++. +++.||||+.++|..+. ..
T Consensus 192 G~~pf~~~~~~~~~~~i~~~--~~~~~~--~~~~~~~~li~~~l~~~P~~R~---~~~~~l~~h~~~~~~~~~~~~~~~~ 264 (316)
T cd05619 192 GQSPFHGHDEEELFQSIRMD--NPCYPR--WLTREAKDILVKLFVREPERRL---GVKGDIRQHPFFREIDWSALEEREI 264 (316)
T ss_pred CCCCCCCCCHHHHHHHHHhC--CCCCCc--cCCHHHHHHHHHHhccCHhhcC---CChHHHHcCcccCCCCHHHHHhCCC
Confidence 99999988887777776542 233443 588999999999999 999999 665 89999999999999875 57
Q ss_pred CCCccccCCCCccCCCCCCCCCCCCCCCC
Q 012988 407 EAAFKPEINGELDTQNFMKFDELDPPASG 435 (452)
Q Consensus 407 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 435 (452)
++++.|...+..+.++|++....+.+..+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (316)
T cd05619 265 EPPFKPKVKSANDCSNFDKEFLNEKPRLS 293 (316)
T ss_pred CCCcCCCCCCccchhhcChhhhcCCcccC
Confidence 88999999999999999876655544444
No 65
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=6.9e-52 Score=406.19 Aligned_cols=283 Identities=40% Similarity=0.719 Sum_probs=242.9
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHH-HHHHhCCCceeeEEEEEEcCCeEEEEEeecCC
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERN-LLAEVASHCIVKLYYSFQDTEYLYLIMEYLPG 170 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~-il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~g 170 (452)
+.||+|+||+||+|.++.+|+.||+|++.+...........+..|.. +++.++||||+++++++...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999999999999999998765444444455566655 46779999999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcccccc
Q 012988 171 GDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTI 250 (452)
Q Consensus 171 gsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~ 250 (452)
|+|..++.....+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~----------- 149 (325)
T cd05604 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ----------- 149 (325)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC-----------
Confidence 999999988889999999999999999999999999999999999999999999999999998743110
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhh
Q 012988 251 DDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 330 (452)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ellt 330 (452)
.......+||+.|+|||++.+..++.++|||||||++|+|++
T Consensus 150 --------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~ 191 (325)
T cd05604 150 --------------------------------------SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLY 191 (325)
T ss_pred --------------------------------------CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhc
Confidence 001124579999999999999999999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC-CHHHHhcCCCcCCCCccccc--cC
Q 012988 331 GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG-GAHQIKAHPWFKDVVWDKLY--EM 406 (452)
Q Consensus 331 G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~-~~~eil~hp~f~~~~~~~l~--~~ 406 (452)
|..||.+.+..+.+..+... .+.++ ..++..+.++|.+||. ||.+|++.. ++.+++.||||+.++|..+. ++
T Consensus 192 G~~pf~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~~~~~~~~~~ 267 (325)
T cd05604 192 GLPPFYCRDVAEMYDNILHK--PLVLR--PGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSWTDLEQKKI 267 (325)
T ss_pred CCCCCCCCCHHHHHHHHHcC--CccCC--CCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCCHHHHHhCCC
Confidence 99999998888887777652 33333 3578999999999999 999999753 67899999999999998885 46
Q ss_pred CCCccccCCCCccCCCCCCCC
Q 012988 407 EAAFKPEINGELDTQNFMKFD 427 (452)
Q Consensus 407 ~~~~~p~~~~~~~~~~~~~~~ 427 (452)
++++.|......+.++|+...
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~ 288 (325)
T cd05604 268 PPPFNPNVEGPDDISNFDAVF 288 (325)
T ss_pred CCCcCCcCCCcchhhhcCCcc
Confidence 788999998888888887533
No 66
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-53 Score=413.86 Aligned_cols=257 Identities=32% Similarity=0.547 Sum_probs=231.2
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEE
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLY 162 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~ 162 (452)
-....|....+||+|+.|.||.|....+++.||||.+....... .+-+.+|+.+|+..+|+|||.+++.|.-.+.++
T Consensus 270 dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~---keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLW 346 (550)
T KOG0578|consen 270 DPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK---KELLLNEILVMRDLHHPNIVNFLDSYLVGDELW 346 (550)
T ss_pred ChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCc---hhhhHHHHHHHHhccchHHHHHHHHhcccceeE
Confidence 34467999999999999999999999999999999998764333 356889999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcch
Q 012988 163 LIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLY 242 (452)
Q Consensus 163 lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~ 242 (452)
+|||||+||+|.+.+. ...++|.+++.++++++.||+|||.+||+|||||.+|||++.+|.+||+|||+|..+....
T Consensus 347 VVMEym~ggsLTDvVt-~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~-- 423 (550)
T KOG0578|consen 347 VVMEYMEGGSLTDVVT-KTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ-- 423 (550)
T ss_pred EEEeecCCCchhhhhh-cccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeecccccc--
Confidence 9999999999999884 4569999999999999999999999999999999999999999999999999998775321
Q ss_pred hhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhh
Q 012988 243 AIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLG 322 (452)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlG 322 (452)
....+.+|||.|||||++....|+.++||||||
T Consensus 424 -----------------------------------------------~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLG 456 (550)
T KOG0578|consen 424 -----------------------------------------------SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLG 456 (550)
T ss_pred -----------------------------------------------CccccccCCCCccchhhhhhcccCccccchhhh
Confidence 123367999999999999999999999999999
Q ss_pred HHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcC
Q 012988 323 AIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFK 396 (452)
Q Consensus 323 vil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~ 396 (452)
++++||+-|++||...++...+..|.. ++.+.+.....+|++++||+.+||+ |+.+|+ +|.++|.||||+
T Consensus 457 IMaIEMveGEPPYlnE~PlrAlyLIa~-ng~P~lk~~~klS~~~kdFL~~cL~~dv~~Ra---sA~eLL~HpFl~ 527 (550)
T KOG0578|consen 457 IMAIEMVEGEPPYLNENPLRALYLIAT-NGTPKLKNPEKLSPELKDFLDRCLVVDVEQRA---SAKELLEHPFLK 527 (550)
T ss_pred hHHHHHhcCCCCccCCChHHHHHHHhh-cCCCCcCCccccCHHHHHHHHHHhhcchhcCC---CHHHHhcChhhh
Confidence 999999999999999988888877765 4566666666899999999999999 999999 999999999995
No 67
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-54 Score=409.48 Aligned_cols=259 Identities=32% Similarity=0.520 Sum_probs=224.8
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhC-CCceeeEEEEEEcCC-e
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVA-SHCIVKLYYSFQDTE-Y 160 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~~~~-~ 160 (452)
+..++|.++++||.|+||.||+|+.+.+|..||||.|++... .... -.-.+|+..|++++ |||||++.+++.+.+ .
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~-s~ee-~~nLREvksL~kln~hpniikL~Evi~d~~~~ 84 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFY-SWEE-CMNLREVKSLRKLNPHPNIIKLKEVIRDNDRI 84 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhc-cHHH-HHHHHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence 345789999999999999999999999999999999976533 2222 23467999999998 999999999999888 9
Q ss_pred EEEEEeecCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 161 LYLIMEYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 161 ~~lV~E~~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
+|+||||| ..+|+++++. ++.|++..++.|+.||+.||+|+|.+|+.||||||||||+.....+||+|||+|+.....
T Consensus 85 L~fVfE~M-d~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Sk 163 (538)
T KOG0661|consen 85 LYFVFEFM-DCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSK 163 (538)
T ss_pred EeeeHHhh-hhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccC
Confidence 99999999 6699999966 468999999999999999999999999999999999999999999999999999987533
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchh
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDW 318 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~Di 318 (452)
. ..+..+.|++|+|||+++. .-|+.++|+
T Consensus 164 p--------------------------------------------------PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~ 193 (538)
T KOG0661|consen 164 P--------------------------------------------------PYTEYVSTRWYRAPEVLLRSGYYSSPVDM 193 (538)
T ss_pred C--------------------------------------------------CcchhhhcccccchHHhhhccccCCchHH
Confidence 2 2336789999999999886 567999999
Q ss_pred hhhhHHHHHhhhCCCCCCCCChHHHHHHHhhc-----------------cCcccCCCC---------CCCChhHHHHHHH
Q 012988 319 WSLGAIMYEMLVGYPPFYADDPITTCRKIVHW-----------------RNHLKFPDD---------SKLSPEAKDLICR 372 (452)
Q Consensus 319 wSlGvil~elltG~~Pf~~~~~~~~~~~i~~~-----------------~~~~~~p~~---------~~~s~~~~dLi~~ 372 (452)
||+|||++|+.+-++.|.|.+..+.+.+|..- ...+.+|.. +..+.++.+||.+
T Consensus 194 wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ 273 (538)
T KOG0661|consen 194 WAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIER 273 (538)
T ss_pred HHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHH
Confidence 99999999999999999999999998888651 123334432 2478999999999
Q ss_pred hhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 373 LLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 373 mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
||. ||.+|| +|.++|+||||+.
T Consensus 274 ll~WDP~kRp---TA~~al~~pffq~ 296 (538)
T KOG0661|consen 274 LLAWDPDKRP---TASQALQHPFFQV 296 (538)
T ss_pred HhcCCCccCc---cHHHHhcCccccc
Confidence 999 999999 9999999999985
No 68
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=7e-52 Score=404.89 Aligned_cols=285 Identities=40% Similarity=0.733 Sum_probs=246.9
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEEcCCeEEEEEeecCC
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQDTEYLYLIMEYLPG 170 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~~~~lV~E~~~g 170 (452)
+.||+|+||+||+|.++.++..||+|++.+...........+..|+.++..+ +||||+++++++.+.+.+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999999999999999999876555555566778899999888 699999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcccccc
Q 012988 171 GDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTI 250 (452)
Q Consensus 171 gsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~ 250 (452)
|+|..++.+.+.+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----------- 149 (318)
T cd05570 81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG----------- 149 (318)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcC-----------
Confidence 999999988889999999999999999999999999999999999999999999999999998642110
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhh
Q 012988 251 DDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 330 (452)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ellt 330 (452)
.......+||+.|+|||++.+..++.++|||||||++|+|++
T Consensus 150 --------------------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~ 191 (318)
T cd05570 150 --------------------------------------GVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLA 191 (318)
T ss_pred --------------------------------------CCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhh
Confidence 001124579999999999999999999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCH-----HHHhcCCCcCCCCccccc
Q 012988 331 GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGA-----HQIKAHPWFKDVVWDKLY 404 (452)
Q Consensus 331 G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~-----~eil~hp~f~~~~~~~l~ 404 (452)
|..||.+.+.......+.. ....+|. .++.++.+||.+||. ||.+|+ ++ .+++.||||+.++|....
T Consensus 192 G~~pf~~~~~~~~~~~i~~--~~~~~~~--~~~~~~~~li~~~l~~dP~~R~---s~~~~~~~~ll~~~~~~~~~~~~~~ 264 (318)
T cd05570 192 GQSPFEGDDEDELFQSILE--DEVRYPR--WLSKEAKSILKSFLTKNPEKRL---GCLPTGEQDIKGHPFFREIDWDKLE 264 (318)
T ss_pred CCCCCCCCCHHHHHHHHHc--CCCCCCC--cCCHHHHHHHHHHccCCHHHcC---CCCCCCHHHHhcCCCcCCCCHHHHH
Confidence 9999998888777777765 3334443 689999999999999 999999 77 999999999999998774
Q ss_pred --cCCCCccccCCCCccCCCCCCCCCCCCC
Q 012988 405 --EMEAAFKPEINGELDTQNFMKFDELDPP 432 (452)
Q Consensus 405 --~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 432 (452)
...+|+.|.+....+.++|+.-...+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (318)
T cd05570 265 RKEIKPPFKPKIKGRFDVSNFDDEFTKEKP 294 (318)
T ss_pred hCCCCCCcCCCCCCcchhhhcCchhccCcc
Confidence 5778899999998888888754444433
No 69
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.8e-51 Score=403.61 Aligned_cols=286 Identities=36% Similarity=0.669 Sum_probs=241.9
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEEcCCeEEEEEeecCC
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQDTEYLYLIMEYLPG 170 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~~~~lV~E~~~g 170 (452)
+.||+|+||+||+|++..+++.||+|++.+...........+.+|+.++..+ +||+|+.+++++.+.+.+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4799999999999999999999999999876555555567788999999888 699999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcccccc
Q 012988 171 GDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTI 250 (452)
Q Consensus 171 gsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~ 250 (452)
|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~----------- 149 (327)
T cd05617 81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP----------- 149 (327)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCC-----------
Confidence 999999988889999999999999999999999999999999999999999999999999998743110
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhh
Q 012988 251 DDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 330 (452)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ellt 330 (452)
.......+||+.|+|||++.+..++.++|||||||++|+|++
T Consensus 150 --------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~ 191 (327)
T cd05617 150 --------------------------------------GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMA 191 (327)
T ss_pred --------------------------------------CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHh
Confidence 001124579999999999999999999999999999999999
Q ss_pred CCCCCCCC------ChH-HHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCC---CCHHHHhcCCCcCCCC
Q 012988 331 GYPPFYAD------DPI-TTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGT---GGAHQIKAHPWFKDVV 399 (452)
Q Consensus 331 G~~Pf~~~------~~~-~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~---~~~~eil~hp~f~~~~ 399 (452)
|..||... +.. .....+.. ....+|. .++..+.+||.+||. ||.+|++. .++.+++.||||+.++
T Consensus 192 g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~ 267 (327)
T cd05617 192 GRSPFDIITDNPDMNTEDYLFQVILE--KPIRIPR--FLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSID 267 (327)
T ss_pred CCCCCCccCCCcccccHHHHHHHHHh--CCCCCCC--CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCC
Confidence 99999532 122 22333332 3344554 688999999999999 99999963 2578999999999999
Q ss_pred ccccc--cCCCCccccCCCCccCCCCCCCCCCC
Q 012988 400 WDKLY--EMEAAFKPEINGELDTQNFMKFDELD 430 (452)
Q Consensus 400 ~~~l~--~~~~~~~p~~~~~~~~~~~~~~~~~~ 430 (452)
|+.+. ...++|.|.+.+..+.++|++....+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (327)
T cd05617 268 WDLLEKKQVTPPFKPQITDDYGLENFDTQFTSE 300 (327)
T ss_pred HHHHHhCCCCCCccCCCCCCcchhhcCCccccC
Confidence 99885 46788999998888888887654433
No 70
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-52 Score=407.75 Aligned_cols=261 Identities=37% Similarity=0.619 Sum_probs=240.3
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhC-CCceeeEEEEEEcCCeEE
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVA-SHCIVKLYYSFQDTEYLY 162 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~~~~~~~ 162 (452)
..+.|++.+.||.|.||.||+|+.+.+|+.||+|++.+...........+.+|+.||+.+. |||||.++++|++...++
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 3467999999999999999999999999999999999887766556778999999999998 999999999999999999
Q ss_pred EEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCC----CcEEEeeccCCccCCC
Q 012988 163 LIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKN----GHMKLSDFGLCKPLDC 238 (452)
Q Consensus 163 lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~----g~ikl~DFGla~~~~~ 238 (452)
+|||+|.||.|.+.+... .+++..+..++.|++.|+.|||+.||+||||||+|+|+... +.+|++|||+|.....
T Consensus 113 lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~ 191 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP 191 (382)
T ss_pred EEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence 999999999999999776 49999999999999999999999999999999999999643 4799999999987642
Q ss_pred CcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchh
Q 012988 239 STLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDW 318 (452)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Di 318 (452)
.......+||+.|+|||++...+|+..+||
T Consensus 192 --------------------------------------------------~~~~~~~~Gtp~y~APEvl~~~~y~~~~Di 221 (382)
T KOG0032|consen 192 --------------------------------------------------GERLHTIVGTPEYVAPEVLGGRPYGDEVDV 221 (382)
T ss_pred --------------------------------------------------CceEeeecCCccccCchhhcCCCCCcccch
Confidence 123447899999999999999999999999
Q ss_pred hhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 319 WSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 319 wSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
||+||++|.|++|.+||.+.+....+.+|......+..+.+..+|..++|||++||. ||..|+ ++.++|+|||+++
T Consensus 222 WS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~---ta~~~L~HpWi~~ 298 (382)
T KOG0032|consen 222 WSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRL---TAAQALQHPWIKS 298 (382)
T ss_pred hHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCC---CHHHHhcCccccC
Confidence 999999999999999999999999999999877777888888999999999999999 999999 9999999999986
Q ss_pred C
Q 012988 398 V 398 (452)
Q Consensus 398 ~ 398 (452)
.
T Consensus 299 ~ 299 (382)
T KOG0032|consen 299 I 299 (382)
T ss_pred C
Confidence 5
No 71
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.8e-54 Score=382.70 Aligned_cols=262 Identities=33% Similarity=0.590 Sum_probs=235.7
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhc-----ccchHHHHHHHHHHHHHh-CCCceeeEEEEEEcCC
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMV-----KRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQDTE 159 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~ 159 (452)
..|.-.+.||.|..++|.++.++.+|+.+|+|++.-.... .....+.-..|+.||+++ .||+|+++.++|+.+.
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s 96 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA 96 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence 4577788999999999999999999999999998643211 122345567899999998 5999999999999999
Q ss_pred eEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 160 YLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
.+++|+|.|+.|.|.++|.+.-.++|..++.+++|++.|++|||.++||||||||+|||++++-++||+|||+|..+..+
T Consensus 97 F~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~G 176 (411)
T KOG0599|consen 97 FVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPG 176 (411)
T ss_pred hhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCCc
Confidence 99999999999999999999899999999999999999999999999999999999999999999999999999987643
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC------CCCC
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK------KGYG 313 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~------~~~~ 313 (452)
. .....||||+|+|||.+.. .+|+
T Consensus 177 e--------------------------------------------------kLrelCGTPgYLAPEtikC~m~e~~pGYs 206 (411)
T KOG0599|consen 177 E--------------------------------------------------KLRELCGTPGYLAPETIKCSMYENHPGYS 206 (411)
T ss_pred h--------------------------------------------------hHHHhcCCCcccChhheeeecccCCCCcc
Confidence 2 2236799999999999863 5789
Q ss_pred ccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcC
Q 012988 314 MECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAH 392 (452)
Q Consensus 314 ~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~h 392 (452)
..+|+||+|||+|.||.|.+||.......++..|+.++-.+.-|.|..+|..++|||++||+ ||.+|+ +++|+|.|
T Consensus 207 ~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ri---take~LaH 283 (411)
T KOG0599|consen 207 KEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRI---TAKEALAH 283 (411)
T ss_pred chhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcc---cHHHHhcC
Confidence 99999999999999999999999999999999999988888889999999999999999999 999999 99999999
Q ss_pred CCcCCCCc
Q 012988 393 PWFKDVVW 400 (452)
Q Consensus 393 p~f~~~~~ 400 (452)
|||..+-.
T Consensus 284 pff~q~~~ 291 (411)
T KOG0599|consen 284 PFFIQIAQ 291 (411)
T ss_pred hHHHHHHH
Confidence 99975543
No 72
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2e-51 Score=402.54 Aligned_cols=282 Identities=44% Similarity=0.830 Sum_probs=241.4
Q ss_pred eceeccCCCeEEEEEEEc---cCCCEEEEEEeecchhcc-cchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 91 LTIIGRGAFGEVRLCREK---KSGNIYAMKKLKKSEMVK-RGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 91 ~~~LG~G~~g~V~~a~~~---~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
++.||+|+||.||+|++. .+++.||+|++.+..... ......+.+|+.+|+.++||||++++++|.+++.+|+|||
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence 368999999999999864 478999999998754322 2334567889999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcc
Q 012988 167 YLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHE 246 (452)
Q Consensus 167 ~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~ 246 (452)
|+++|+|.+++...+.+++..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~------- 153 (323)
T cd05584 81 YLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE------- 153 (323)
T ss_pred CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC-------
Confidence 9999999999988889999999999999999999999999999999999999999999999999998743210
Q ss_pred ccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHH
Q 012988 247 HKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 326 (452)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ 326 (452)
.......+||+.|+|||++.+..++.++|||||||++|
T Consensus 154 ------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 191 (323)
T cd05584 154 ------------------------------------------GTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMY 191 (323)
T ss_pred ------------------------------------------CCcccccCCCccccChhhccCCCCCCcceecccHHHHH
Confidence 00112357999999999999989999999999999999
Q ss_pred HhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCC--CCHHHHhcCCCcCCCCcccc
Q 012988 327 EMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGT--GGAHQIKAHPWFKDVVWDKL 403 (452)
Q Consensus 327 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~--~~~~eil~hp~f~~~~~~~l 403 (452)
+|++|..||.+.+.......+.. ....+|. .+++++.+||.+||. ||.+|++. .++.+++.||||...+|..+
T Consensus 192 ell~G~~pf~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~~~~~ 267 (323)
T cd05584 192 DMLTGAPPFTAENRKKTIDKILK--GKLNLPP--YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNWDDL 267 (323)
T ss_pred HHhcCCCCCCCCCHHHHHHHHHc--CCCCCCC--CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCCHHHH
Confidence 99999999999888877777765 3344443 688999999999999 99999964 27999999999999999888
Q ss_pred c--cCCCCccccCCCCccCCCCCC
Q 012988 404 Y--EMEAAFKPEINGELDTQNFMK 425 (452)
Q Consensus 404 ~--~~~~~~~p~~~~~~~~~~~~~ 425 (452)
. ...+++.+......+.+.|..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~ 291 (323)
T cd05584 268 LARKVEPPFKPLLQSEEDVSQFDS 291 (323)
T ss_pred hcCCCCCCcCCCCCCcchhhhcCc
Confidence 5 466778888877777776664
No 73
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.5e-52 Score=372.24 Aligned_cols=258 Identities=31% Similarity=0.528 Sum_probs=223.3
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|..+++||+|+||.||+|++..||+.||||+++.... +.+......+|+..|+.++|+||+.++++|.+.+.+-||+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~-kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNA-KDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeecccc-ccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence 568889999999999999999999999999999987643 3333445778999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 166 EYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 166 E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
|||+ .+|...++.. ..++...++.|+.+++.||+|||++.|+||||||.|+||+++|.+||+|||+|+.+....
T Consensus 81 Efm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~---- 155 (318)
T KOG0659|consen 81 EFMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN---- 155 (318)
T ss_pred Eecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCC----
Confidence 9995 5999998664 579999999999999999999999999999999999999999999999999999875321
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchhhhhhH
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 323 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~DiwSlGv 323 (452)
......+-|.+|+|||.+.| ..|+..+|+||.||
T Consensus 156 ---------------------------------------------~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGC 190 (318)
T KOG0659|consen 156 ---------------------------------------------RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGC 190 (318)
T ss_pred ---------------------------------------------cccccceeeeeccChHHhccchhcCCcchhhhHHH
Confidence 11123378999999999987 56999999999999
Q ss_pred HHHHhhhCCCCCCCCChHHHHHHHhhccCcc---------cCCC---------------CCCCChhHHHHHHHhhc-Ccc
Q 012988 324 IMYEMLVGYPPFYADDPITTCRKIVHWRNHL---------KFPD---------------DSKLSPEAKDLICRLLC-DVE 378 (452)
Q Consensus 324 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~---------~~p~---------------~~~~s~~~~dLi~~mL~-dp~ 378 (452)
|+.||+-|.+-|.|.++.+++..|+..-+.+ .+|+ .+..+.++.||+.+|+. ||.
T Consensus 191 I~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~ 270 (318)
T KOG0659|consen 191 IFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPK 270 (318)
T ss_pred HHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCch
Confidence 9999999999999999999998887622211 1111 12357889999999999 999
Q ss_pred ccCCCCCHHHHhcCCCcCC
Q 012988 379 HRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 379 ~R~~~~~~~eil~hp~f~~ 397 (452)
+|+ ++.|+++|+||..
T Consensus 271 ~Ri---ta~qaL~~~yf~~ 286 (318)
T KOG0659|consen 271 KRI---TASQALKHPYFKS 286 (318)
T ss_pred hcc---cHHHHhcchhhhc
Confidence 999 9999999999985
No 74
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.5e-53 Score=395.75 Aligned_cols=255 Identities=31% Similarity=0.590 Sum_probs=234.6
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEE
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYL 163 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~l 163 (452)
...+|++.+.||+|+||+|-+|.....|..||||-++++.+......-++++|++||..|+||||+.+|++|+..+.+.|
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvi 130 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVI 130 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEE
Confidence 34689999999999999999999999999999999999998888889999999999999999999999999999999999
Q ss_pred EEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 164 IMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 164 V~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
||||..+|.|++|+...+.+++.+++.+++||++|+.|+|.++++|||||.+|||+|.++++||+||||+..+..
T Consensus 131 vMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~----- 205 (668)
T KOG0611|consen 131 VMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYAD----- 205 (668)
T ss_pred EEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhcc-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999999886642
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCC-Cccchhhhhh
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGY-GMECDWWSLG 322 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~-~~~~DiwSlG 322 (452)
.....++||+|.|.+||++.+.+| ++.+|.||||
T Consensus 206 ---------------------------------------------~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLG 240 (668)
T KOG0611|consen 206 ---------------------------------------------KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLG 240 (668)
T ss_pred ---------------------------------------------ccHHHHhcCCcccCCccccCCCCCCCCccchhhHH
Confidence 223447899999999999999999 7899999999
Q ss_pred HHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcC
Q 012988 323 AIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFK 396 (452)
Q Consensus 323 vil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~ 396 (452)
|+||.|+.|..||.+.+...+..+|-.+ ...-| .-+..+.-||++||. ||+.|. ++.+|..|=|.+
T Consensus 241 vLLYtLVyGtMPFDG~Dhk~lvrQIs~G--aYrEP---~~PSdA~gLIRwmLmVNP~RRA---TieDiAsHWWvN 307 (668)
T KOG0611|consen 241 VLLYTLVYGTMPFDGRDHKRLVRQISRG--AYREP---ETPSDASGLIRWMLMVNPERRA---TIEDIASHWWVN 307 (668)
T ss_pred HHHHHHhhcccccCCchHHHHHHHhhcc--cccCC---CCCchHHHHHHHHHhcCcccch---hHHHHhhhheee
Confidence 9999999999999999999888888763 22223 245789999999998 999999 999999998874
No 75
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=3.6e-51 Score=401.09 Aligned_cols=281 Identities=39% Similarity=0.730 Sum_probs=239.3
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHH-HHHHhCCCceeeEEEEEEcCCeEEEEEeecCC
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERN-LLAEVASHCIVKLYYSFQDTEYLYLIMEYLPG 170 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~-il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~g 170 (452)
+.||+|+||+||+|++..+++.||+|++.+...........+..|.. +++.++||||+++++++.+.+.+|+||||++|
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999999999999999998765433333344444544 56788999999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcccccc
Q 012988 171 GDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTI 250 (452)
Q Consensus 171 gsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~ 250 (452)
|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~----------- 149 (325)
T cd05602 81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH----------- 149 (325)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccC-----------
Confidence 999999988888999999999999999999999999999999999999999999999999998753210
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhh
Q 012988 251 DDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 330 (452)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ellt 330 (452)
.......+||+.|+|||++.+..++.++|||||||++|+|++
T Consensus 150 --------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~ 191 (325)
T cd05602 150 --------------------------------------NGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLY 191 (325)
T ss_pred --------------------------------------CCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhc
Confidence 001124579999999999999999999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC-CHHHHhcCCCcCCCCccccc--cC
Q 012988 331 GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG-GAHQIKAHPWFKDVVWDKLY--EM 406 (452)
Q Consensus 331 G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~-~~~eil~hp~f~~~~~~~l~--~~ 406 (452)
|..||.+.+..+.+..+... ...++ ..++..+.+||.+||+ ||.+|++.. .+.++++|+||..++|..+. +.
T Consensus 192 g~~pf~~~~~~~~~~~i~~~--~~~~~--~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 267 (325)
T cd05602 192 GLPPFYSRNTAEMYDNILNK--PLQLK--PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINWDDLINKKI 267 (325)
T ss_pred CCCCCCCCCHHHHHHHHHhC--CcCCC--CCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCCHHHHHhCCC
Confidence 99999998888887777652 23333 3689999999999999 999999653 56799999999999999985 46
Q ss_pred CCCccccCCCCccCCCCCC
Q 012988 407 EAAFKPEINGELDTQNFMK 425 (452)
Q Consensus 407 ~~~~~p~~~~~~~~~~~~~ 425 (452)
.+++.|....+.+...|+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~ 286 (325)
T cd05602 268 TPPFNPNVSGPNDLRHFDP 286 (325)
T ss_pred CcCcCCCCCCcchhhhcCC
Confidence 7788888888777777764
No 76
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=4.5e-51 Score=399.70 Aligned_cols=282 Identities=41% Similarity=0.759 Sum_probs=240.2
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHH-HHHHhCCCceeeEEEEEEcCCeEEEEEeecCC
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERN-LLAEVASHCIVKLYYSFQDTEYLYLIMEYLPG 170 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~-il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~g 170 (452)
+.||+|+||+||+|++..+|+.||+|++.+...........+..|+. +++.++||||+++++++.+.+.+|+||||++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999999999999999998765444444455555654 67889999999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcccccc
Q 012988 171 GDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTI 250 (452)
Q Consensus 171 gsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~ 250 (452)
|+|...+.....+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++......
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~---------- 150 (321)
T cd05603 81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE---------- 150 (321)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC----------
Confidence 9999999888889999999999999999999999999999999999999999999999999987431100
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhh
Q 012988 251 DDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 330 (452)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ellt 330 (452)
......+||+.|+|||++.+..++.++|||||||++|+|++
T Consensus 151 ---------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~ 191 (321)
T cd05603 151 ---------------------------------------ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLY 191 (321)
T ss_pred ---------------------------------------CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhc
Confidence 01124579999999999999899999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC-CHHHHhcCCCcCCCCccccc--cC
Q 012988 331 GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG-GAHQIKAHPWFKDVVWDKLY--EM 406 (452)
Q Consensus 331 G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~-~~~eil~hp~f~~~~~~~l~--~~ 406 (452)
|..||.+.+....+..+.. ....+|. ..+..+.++|.+||. ||.+|++.. ++.++++||||..++|..+. .+
T Consensus 192 g~~pf~~~~~~~~~~~i~~--~~~~~~~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (321)
T cd05603 192 GLPPFYSRDVSQMYDNILH--KPLQLPG--GKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINWDDLYHKRI 267 (321)
T ss_pred CCCCCCCCCHHHHHHHHhc--CCCCCCC--CCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCHHHHhcCCC
Confidence 9999999888777777765 3344443 578999999999999 999999653 67899999999999999875 46
Q ss_pred CCCccccCCCCccCCCCCCC
Q 012988 407 EAAFKPEINGELDTQNFMKF 426 (452)
Q Consensus 407 ~~~~~p~~~~~~~~~~~~~~ 426 (452)
.+++.|......+...|+..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~ 287 (321)
T cd05603 268 TPPYNPNVAGPADLRHFDPE 287 (321)
T ss_pred CCCcCCCCCCcchhhhcCCc
Confidence 77888887777777777643
No 77
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-52 Score=394.63 Aligned_cols=259 Identities=35% Similarity=0.569 Sum_probs=218.0
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC--eEE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE--YLY 162 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~--~~~ 162 (452)
..+|...+.||+|+||.||++.+..+|..+|||.+..... ...+.+.+|+.+|++++|||||++++...... .++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~---~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~ 92 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDS---PTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYN 92 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccc---hhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeE
Confidence 4568889999999999999999999999999998876521 12567899999999999999999999754444 699
Q ss_pred EEEeecCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECC-CCcEEEeeccCCccCCCCc
Q 012988 163 LIMEYLPGGDMMTLLMRED-TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDK-NGHMKLSDFGLCKPLDCST 240 (452)
Q Consensus 163 lV~E~~~ggsL~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~-~g~ikl~DFGla~~~~~~~ 240 (452)
++|||+++|+|.+++.+.+ .+++..++.|.+|++.||.|||++|||||||||+|||++. +|.+||+|||+++......
T Consensus 93 i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred eeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 9999999999999998876 7999999999999999999999999999999999999999 7999999999998764200
Q ss_pred chhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCC-Cccchhh
Q 012988 241 LYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGY-GMECDWW 319 (452)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~-~~~~Diw 319 (452)
. .........||+.|||||++.++.. ..++|||
T Consensus 173 ~----------------------------------------------~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiW 206 (313)
T KOG0198|consen 173 T----------------------------------------------KSDSELSVQGTPNYMAPEVIRNGEVARRESDIW 206 (313)
T ss_pred c----------------------------------------------cccccccccCCccccCchhhcCCCcCCccchhh
Confidence 0 0111235689999999999986322 3599999
Q ss_pred hhhHHHHHhhhCCCCCCC-CChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 320 SLGAIMYEMLVGYPPFYA-DDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 320 SlGvil~elltG~~Pf~~-~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
||||++.||+||.+||.. ......+..+......+.+|. .+|+++++||.+|+. ||..|| +|.++|.|||.+.
T Consensus 207 SlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~--~ls~~a~~Fl~~C~~~~p~~Rp---ta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 207 SLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPD--SLSDEAKDFLRKCFKRDPEKRP---TAEELLEHPFLKQ 281 (313)
T ss_pred hcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCc--ccCHHHHHHHHHHhhcCcccCc---CHHHHhhChhhhc
Confidence 999999999999999987 455555555554333345554 699999999999999 999999 9999999999975
No 78
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=8.7e-52 Score=379.26 Aligned_cols=265 Identities=30% Similarity=0.467 Sum_probs=226.2
Q ss_pred CCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEc--CC
Q 012988 82 KICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQD--TE 159 (452)
Q Consensus 82 ~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~--~~ 159 (452)
--+.++|+.+..|++|+||.||+|+++.|++.||+|+++... .+...--...+|+.+|..++|||||.+-.+... -+
T Consensus 72 Crsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmek-ek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d 150 (419)
T KOG0663|consen 72 CRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEK-EKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMD 150 (419)
T ss_pred cccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeeccccc-ccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccc
Confidence 345678999999999999999999999999999999997664 233333456789999999999999999888754 45
Q ss_pred eEEEEEeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCC
Q 012988 160 YLYLIMEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDC 238 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~ 238 (452)
.+|||||||. -+|..++..- .+|...+++.++.|++.||+|||.+.|+||||||+|+|++..|.+||+|||+|+.+..
T Consensus 151 ~iy~VMe~~E-hDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygs 229 (419)
T KOG0663|consen 151 KIYIVMEYVE-HDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGS 229 (419)
T ss_pred eeeeeHHHHH-hhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcC
Confidence 7999999995 5999999774 4899999999999999999999999999999999999999999999999999998753
Q ss_pred CcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccch
Q 012988 239 STLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECD 317 (452)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~D 317 (452)
+. +..+..+-|.+|+|||++.+ ..|+.++|
T Consensus 230 p~-------------------------------------------------k~~T~lVVTLWYRaPELLLG~~tyst~iD 260 (419)
T KOG0663|consen 230 PL-------------------------------------------------KPYTPLVVTLWYRAPELLLGAKTYSTAVD 260 (419)
T ss_pred Cc-------------------------------------------------ccCcceEEEeeecCHHHhcCCcccCcchh
Confidence 31 22346788999999999998 56899999
Q ss_pred hhhhhHHHHHhhhCCCCCCCCChHHHHHHHhh---------ccCcc--------cCCCC-----------CCCChhHHHH
Q 012988 318 WWSLGAIMYEMLVGYPPFYADDPITTCRKIVH---------WRNHL--------KFPDD-----------SKLSPEAKDL 369 (452)
Q Consensus 318 iwSlGvil~elltG~~Pf~~~~~~~~~~~i~~---------~~~~~--------~~p~~-----------~~~s~~~~dL 369 (452)
+||+|||+.||+++++.|.|.+..+.+.+|+. |.+.. .++.. ..++....||
T Consensus 261 MWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~L 340 (419)
T KOG0663|consen 261 MWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDL 340 (419)
T ss_pred hhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHH
Confidence 99999999999999999999999999999976 22211 11110 1266999999
Q ss_pred HHHhhc-CccccCCCCCHHHHhcCCCcCCCCc
Q 012988 370 ICRLLC-DVEHRLGTGGAHQIKAHPWFKDVVW 400 (452)
Q Consensus 370 i~~mL~-dp~~R~~~~~~~eil~hp~f~~~~~ 400 (452)
+..||. ||.+|. ||.|.|+|+||.+...
T Consensus 341 ln~llt~dP~kR~---tA~~~L~h~~F~e~P~ 369 (419)
T KOG0663|consen 341 LNKLLTYDPGKRI---TAEDGLKHEYFRETPL 369 (419)
T ss_pred HHHHhccCccccc---cHHHhhcccccccCCC
Confidence 999999 999999 9999999999997543
No 79
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=3.5e-51 Score=402.05 Aligned_cols=280 Identities=43% Similarity=0.779 Sum_probs=239.1
Q ss_pred eccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh---CCCceeeEEEEEEcCCeEEEEEeecCC
Q 012988 94 IGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV---ASHCIVKLYYSFQDTEYLYLIMEYLPG 170 (452)
Q Consensus 94 LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l---~hp~iv~l~~~~~~~~~~~lV~E~~~g 170 (452)
||+|+||+||+|+++.+|+.||+|++.+..............|..++... .||||++++++|.+...+|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 79999999999999999999999999876554444455566677777765 699999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcccccc
Q 012988 171 GDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTI 250 (452)
Q Consensus 171 gsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~ 250 (452)
|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~---------- 150 (330)
T cd05586 81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDN---------- 150 (330)
T ss_pred ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC----------
Confidence 9999999888899999999999999999999999999999999999999999999999999987532110
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC-CCCccchhhhhhHHHHHhh
Q 012988 251 DDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK-GYGMECDWWSLGAIMYEML 329 (452)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~-~~~~~~DiwSlGvil~ell 329 (452)
......+||+.|+|||++.+. .++.++|||||||++|+|+
T Consensus 151 ---------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~ell 191 (330)
T cd05586 151 ---------------------------------------KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMC 191 (330)
T ss_pred ---------------------------------------CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEec
Confidence 011245799999999999764 5899999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC-CHHHHhcCCCcCCCCccccc--c
Q 012988 330 VGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG-GAHQIKAHPWFKDVVWDKLY--E 405 (452)
Q Consensus 330 tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~-~~~eil~hp~f~~~~~~~l~--~ 405 (452)
+|..||.+.+..+.+..+.. ....+|. ..+++++++||.+||. ||.+|++.. ++.++++||||.+++|..+. .
T Consensus 192 tG~~Pf~~~~~~~~~~~i~~--~~~~~~~-~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~~~~~~~~~ 268 (330)
T cd05586 192 CGWSPFYAEDTQQMYRNIAF--GKVRFPK-NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADIDWDLLSKKQ 268 (330)
T ss_pred cCCCCCCCCCHHHHHHHHHc--CCCCCCC-ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCCHHHHHhCC
Confidence 99999999888877777765 3344444 2578999999999999 999999653 79999999999999998875 4
Q ss_pred CCCCccccCCCCccCCCCCC
Q 012988 406 MEAAFKPEINGELDTQNFMK 425 (452)
Q Consensus 406 ~~~~~~p~~~~~~~~~~~~~ 425 (452)
+.+++.|......+..+|+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~ 288 (330)
T cd05586 269 ITPPFKPIVDSDEDVSNFDP 288 (330)
T ss_pred CCCCccCCCCCCcchhhcCc
Confidence 67788898887777777753
No 80
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=9.6e-51 Score=396.88 Aligned_cols=281 Identities=43% Similarity=0.755 Sum_probs=238.9
Q ss_pred eceeccCCCeEEEEEEEc---cCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEee
Q 012988 91 LTIIGRGAFGEVRLCREK---KSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEY 167 (452)
Q Consensus 91 ~~~LG~G~~g~V~~a~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~ 167 (452)
++.||+|+||.||++++. .+|+.||+|++.+.... ......+.+|+.+++.++||||+++++++.+.+.+|+||||
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK-VRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcC
Confidence 367999999999999863 57899999999865432 22344567899999999999999999999999999999999
Q ss_pred cCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccc
Q 012988 168 LPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEH 247 (452)
Q Consensus 168 ~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~ 247 (452)
+++|+|.+++.+...+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 80 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~------- 152 (318)
T cd05582 80 LRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE------- 152 (318)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC-------
Confidence 9999999999888889999999999999999999999999999999999999999999999999987542110
Q ss_pred cccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHH
Q 012988 248 KTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 327 (452)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~e 327 (452)
......+||+.|+|||++.+..++.++|||||||++|+
T Consensus 153 ------------------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~e 190 (318)
T cd05582 153 ------------------------------------------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFE 190 (318)
T ss_pred ------------------------------------------CceecccCChhhcCHHHHcCCCCCCccceeccceEeee
Confidence 11224579999999999999899999999999999999
Q ss_pred hhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCC--HHHHhcCCCcCCCCccccc
Q 012988 328 MLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGG--AHQIKAHPWFKDVVWDKLY 404 (452)
Q Consensus 328 lltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~--~~eil~hp~f~~~~~~~l~ 404 (452)
|++|+.||.+.+.......+.. ....+|. .+++.+.+||.+||. ||.+|+++.. +.+++.||||..++|..+.
T Consensus 191 l~tg~~p~~~~~~~~~~~~i~~--~~~~~p~--~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~~~~~ 266 (318)
T cd05582 191 MLTGSLPFQGKDRKETMTMILK--AKLGMPQ--FLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDWNKLY 266 (318)
T ss_pred eccCCCCCCCCCHHHHHHHHHc--CCCCCCC--CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCHHHHH
Confidence 9999999999888877777765 3344443 688999999999999 9999995433 8899999999999999885
Q ss_pred --cCCCCccccCCCCccCCCCCC
Q 012988 405 --EMEAAFKPEINGELDTQNFMK 425 (452)
Q Consensus 405 --~~~~~~~p~~~~~~~~~~~~~ 425 (452)
+..+++.|......+..+++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~ 289 (318)
T cd05582 267 RREIKPPFKPAVGRPDDTFYFDP 289 (318)
T ss_pred hcCCCCCcCCCCCCcchhhhcCc
Confidence 456778887766666665554
No 81
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.5e-50 Score=387.81 Aligned_cols=277 Identities=32% Similarity=0.617 Sum_probs=231.7
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
.|++++.||+|+||+||++.+..++..||+|++.+...........+.+|+.+++.++||||+++++++.+.+.+|+|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 48999999999999999999999999999999976554433344557789999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 167 YLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 167 ~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
|+++|+|..++... ..+++..+..++.|++.||.|||+.||+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~---- 156 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE---- 156 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC----
Confidence 99999999888653 468999999999999999999999999999999999999999999999999987542110
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHH
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 324 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvi 324 (452)
.....+||+.|+|||++.+..++.++||||+||+
T Consensus 157 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~ 190 (285)
T cd05605 157 ----------------------------------------------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCL 190 (285)
T ss_pred ----------------------------------------------ccccccCCCCccCcHHhcCCCCCccccchhHHHH
Confidence 0113468999999999998899999999999999
Q ss_pred HHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC--CHHHHhcCCCcCCCCcc
Q 012988 325 MYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG--GAHQIKAHPWFKDVVWD 401 (452)
Q Consensus 325 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~--~~~eil~hp~f~~~~~~ 401 (452)
+|+|++|..||.+.+.......+..............+++.+.+||.+||. ||.+|++.. ++.+++.||||...+|+
T Consensus 191 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~ 270 (285)
T cd05605 191 IYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFK 270 (285)
T ss_pred HHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCHH
Confidence 999999999998766544333332211111111223588999999999999 999999765 79999999999999999
Q ss_pred cccc--CCCCcccc
Q 012988 402 KLYE--MEAAFKPE 413 (452)
Q Consensus 402 ~l~~--~~~~~~p~ 413 (452)
.+.+ ..+||.|.
T Consensus 271 ~~~~~~~~~~~~~~ 284 (285)
T cd05605 271 RLEAGMLEPPFCPD 284 (285)
T ss_pred HHhhCCCCCCCCCC
Confidence 9863 56777773
No 82
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-50 Score=384.95 Aligned_cols=266 Identities=29% Similarity=0.470 Sum_probs=230.4
Q ss_pred cCCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC
Q 012988 80 RHKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE 159 (452)
Q Consensus 80 ~~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~ 159 (452)
.+....++|++..+||.|..++||+|+...++..||||++.-.... ...+.+++|+..|+.++||||++++.+|..++
T Consensus 20 ~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~--~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~ 97 (516)
T KOG0582|consen 20 EFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCN--NDLDALRKEVQTMSLIDHPNIVTYHCSFVVDS 97 (516)
T ss_pred cCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhh--hhHHHHHHHHHHhhhcCCCCcceEEEEEEecc
Confidence 4567788999999999999999999999999999999999876543 33788999999999999999999999999999
Q ss_pred eEEEEEeecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCC
Q 012988 160 YLYLIMEYLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLD 237 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~ 237 (452)
.+++||.||.+||+.+++... ..+.|..+..++++++.||.|||.+|.||||||+.||||+++|.|||+|||.+..+.
T Consensus 98 ~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~ 177 (516)
T KOG0582|consen 98 ELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLF 177 (516)
T ss_pred eeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeec
Confidence 999999999999999999763 569999999999999999999999999999999999999999999999999987653
Q ss_pred CCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccc-cccccCCccccchhccC--CCCCc
Q 012988 238 CSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLA-FSTVGTPDYIAPEVLLK--KGYGM 314 (452)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gt~~y~APE~~~~--~~~~~ 314 (452)
.+.. +.... .+++||+.|||||++.. .+|+.
T Consensus 178 ~~G~----------------------------------------------R~~~rf~tfvgtp~wmAPEvl~q~~~GYdf 211 (516)
T KOG0582|consen 178 DSGD----------------------------------------------RQVTRFNTFVGTPCWMAPEVLMQQLHGYDF 211 (516)
T ss_pred ccCc----------------------------------------------eeeEeeccccCcccccChHHhhhcccCccc
Confidence 2110 11111 57899999999999654 78999
Q ss_pred cchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCC--------CCCCChhHHHHHHHhhc-CccccCCCCC
Q 012988 315 ECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPD--------DSKLSPEAKDLICRLLC-DVEHRLGTGG 385 (452)
Q Consensus 315 ~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~--------~~~~s~~~~dLi~~mL~-dp~~R~~~~~ 385 (452)
|+||||||++..||.+|..||....+..++..-++ +.++.+. ...++..++.+|..||. ||.+|| +
T Consensus 212 KaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLq--n~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRp---t 286 (516)
T KOG0582|consen 212 KADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQ--NDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRP---T 286 (516)
T ss_pred hhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhc--CCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCC---C
Confidence 99999999999999999999998888777766555 3333222 23467789999999998 999999 9
Q ss_pred HHHHhcCCCcCCC
Q 012988 386 AHQIKAHPWFKDV 398 (452)
Q Consensus 386 ~~eil~hp~f~~~ 398 (452)
+.++|+|+||+..
T Consensus 287 AskLlkh~FFk~~ 299 (516)
T KOG0582|consen 287 ASKLLKHAFFKKA 299 (516)
T ss_pred HHHHhccHHHhhc
Confidence 9999999999875
No 83
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-51 Score=381.56 Aligned_cols=262 Identities=31% Similarity=0.505 Sum_probs=223.6
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEc-----CC
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQD-----TE 159 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~-----~~ 159 (452)
...|..++.||.|+||.|+.|.++.+|+.||||++... +......++..+|+.+|+.++|+||+.+++.+.. -+
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~-F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNP-FENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhh-hhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 35566789999999999999999999999999998633 3344556788999999999999999999999865 34
Q ss_pred eEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 160 YLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
.+|+|+|+| +.+|...++.+..++++.++++++|++.||.|+|+.+|+||||||.|+|++.+..+||+|||+|+.....
T Consensus 100 DvYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~ 178 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKF 178 (359)
T ss_pred eeEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeecccc
Confidence 699999999 7899999988888999999999999999999999999999999999999999999999999999976421
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchh
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDW 318 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~Di 318 (452)
. .....+..+-|.+|+|||++.. ..|+.++||
T Consensus 179 ~-----------------------------------------------~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDi 211 (359)
T KOG0660|consen 179 F-----------------------------------------------EDGFMTEYVATRWYRAPELLLNSSEYTKAIDI 211 (359)
T ss_pred C-----------------------------------------------cccchhcceeeeeecCHHHHhccccccchhhh
Confidence 0 1122346789999999999875 789999999
Q ss_pred hhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCc---------------------ccCCC------CCCCChhHHHHHH
Q 012988 319 WSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNH---------------------LKFPD------DSKLSPEAKDLIC 371 (452)
Q Consensus 319 wSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~---------------------~~~p~------~~~~s~~~~dLi~ 371 (452)
||+|||+.||++|++.|.|.+....+..|+.-.+. ...|. .++.++.+.||+.
T Consensus 212 WSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLle 291 (359)
T KOG0660|consen 212 WSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLE 291 (359)
T ss_pred hhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHH
Confidence 99999999999999999999887777777651111 11111 2367899999999
Q ss_pred Hhhc-CccccCCCCCHHHHhcCCCcCCC
Q 012988 372 RLLC-DVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 372 ~mL~-dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
+||. ||.+|+ |++|+|.||||...
T Consensus 292 kmL~fdP~kRi---ta~eAL~hPYl~~~ 316 (359)
T KOG0660|consen 292 KMLVFDPKKRI---TAEEALAHPYLAPY 316 (359)
T ss_pred HHhccCccccC---CHHHHhcChhhhhh
Confidence 9999 999999 99999999999853
No 84
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.8e-50 Score=386.43 Aligned_cols=268 Identities=35% Similarity=0.664 Sum_probs=223.0
Q ss_pred eccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeecCCCCh
Q 012988 94 IGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDM 173 (452)
Q Consensus 94 LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~ggsL 173 (452)
||+|+||+||+|.++.+++.||+|++.+.........+.+..|+.+++.++||||+++.++|.....+|+||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 79999999999999999999999999876554444456778899999999999999999999999999999999999999
Q ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccccc
Q 012988 174 MTLLMR----EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKT 249 (452)
Q Consensus 174 ~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~ 249 (452)
..++.. +..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++..+....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~--------- 151 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ--------- 151 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC---------
Confidence 888743 3568999999999999999999999999999999999999999999999999987653211
Q ss_pred cCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhh
Q 012988 250 IDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 329 (452)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ell 329 (452)
.......||+.|+|||++.+..++.++|||||||++|+|+
T Consensus 152 ----------------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~ 191 (280)
T cd05608 152 ----------------------------------------SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMI 191 (280)
T ss_pred ----------------------------------------ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHH
Confidence 0011346899999999999999999999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHhhc--cCcccCCCCCCCChhHHHHHHHhhc-CccccCCC--CCHHHHhcCCCcCCCCccccc
Q 012988 330 VGYPPFYADDPITTCRKIVHW--RNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGT--GGAHQIKAHPWFKDVVWDKLY 404 (452)
Q Consensus 330 tG~~Pf~~~~~~~~~~~i~~~--~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~--~~~~eil~hp~f~~~~~~~l~ 404 (452)
+|+.||...+.......+... .....+| ..+++.+.+||.+||. ||.+|++. .+++++++||||++++|..+.
T Consensus 192 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~~~~~ 269 (280)
T cd05608 192 AARGPFRARGEKVENKELKQRILNDSVTYP--DKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWRQLE 269 (280)
T ss_pred hCCCCCCCCCcchhHHHHHHhhcccCCCCc--ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCHhHHh
Confidence 999999765432222222111 1222333 3689999999999999 99999964 278999999999999999875
Q ss_pred c--CCCCccc
Q 012988 405 E--MEAAFKP 412 (452)
Q Consensus 405 ~--~~~~~~p 412 (452)
. .++||.|
T Consensus 270 ~~~~~~~~~~ 279 (280)
T cd05608 270 AGMLPPPFVP 279 (280)
T ss_pred hccCCCCCCC
Confidence 3 5566665
No 85
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.8e-49 Score=382.71 Aligned_cols=284 Identities=48% Similarity=0.916 Sum_probs=252.4
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+.+.+|+||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 47999999999999999999999999999999998765555556677889999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
||+++++|.+++.....+++..+..++.|++.||.|||+.||+||||+|+|||++.+|.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~------ 154 (290)
T cd05580 81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR------ 154 (290)
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC------
Confidence 99999999999988889999999999999999999999999999999999999999999999999998765311
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 325 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil 325 (452)
.....|++.|+|||.+.+..++.++||||||+++
T Consensus 155 ----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 188 (290)
T cd05580 155 ----------------------------------------------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILI 188 (290)
T ss_pred ----------------------------------------------CCCCCCCccccChhhhcCCCCCccccHHHHHHHH
Confidence 1134689999999999888889999999999999
Q ss_pred HHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC--CHHHHhcCCCcCCCCccc
Q 012988 326 YEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG--GAHQIKAHPWFKDVVWDK 402 (452)
Q Consensus 326 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~--~~~eil~hp~f~~~~~~~ 402 (452)
|+|++|..||...+.......+.. ....+|. .++..++++|.+||. ||.+|++.. +++++++||||+.++|..
T Consensus 189 ~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~--~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~ 264 (290)
T cd05580 189 YEMLAGYPPFFDDNPIQIYEKILE--GKVRFPS--FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWIA 264 (290)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHhc--CCccCCc--cCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCCHHH
Confidence 999999999988887666666664 3344554 578999999999999 999999764 899999999999999999
Q ss_pred cc--cCCCCccccCCCCccCCCCCC
Q 012988 403 LY--EMEAAFKPEINGELDTQNFMK 425 (452)
Q Consensus 403 l~--~~~~~~~p~~~~~~~~~~~~~ 425 (452)
+. .+.+|+.|....+.+.+.|++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (290)
T cd05580 265 LLQRKIEAPFIPKVKGPGDTSNFDD 289 (290)
T ss_pred HhhccCCCCccCCCCCccccccccC
Confidence 86 578899999888888888765
No 86
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.7e-49 Score=370.47 Aligned_cols=261 Identities=31% Similarity=0.537 Sum_probs=221.5
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCc-eeeEEEEEEcCC----
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHC-IVKLYYSFQDTE---- 159 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~-iv~l~~~~~~~~---- 159 (452)
...|+.+++||+|+||+||+|+.+.+|+.||+|++.-.... +..-....+|+.+++.++|+| ||.+++++.+.+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccc
Confidence 35588888999999999999999999999999999765321 223345678999999999999 999999998877
Q ss_pred --eEEEEEeecCCCChHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCC
Q 012988 160 --YLYLIMEYLPGGDMMTLLMRED----TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLC 233 (452)
Q Consensus 160 --~~~lV~E~~~ggsL~~~l~~~~----~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla 233 (452)
.+++|+||+ .-+|..++.... .++...++.+++||+.||+|||++||+||||||.||||+++|.+||+|||+|
T Consensus 89 ~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 89 IGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred cceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchH
Confidence 899999999 669999997654 5888899999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC-CC
Q 012988 234 KPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK-GY 312 (452)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~-~~ 312 (452)
+...-+. ...++.++|.+|+|||++.+. .|
T Consensus 168 ra~~ip~-------------------------------------------------~~yt~evvTlWYRaPEvLlGs~~Y 198 (323)
T KOG0594|consen 168 RAFSIPM-------------------------------------------------RTYTPEVVTLWYRAPEVLLGSTSY 198 (323)
T ss_pred HHhcCCc-------------------------------------------------ccccccEEEeeccCHHHhcCCCcC
Confidence 9653111 112356899999999999986 78
Q ss_pred CccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhh---------ccCcc-------cCCCC----------CCCChhH
Q 012988 313 GMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVH---------WRNHL-------KFPDD----------SKLSPEA 366 (452)
Q Consensus 313 ~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~---------~~~~~-------~~p~~----------~~~s~~~ 366 (452)
+..+||||+|||++||+++++.|.+.+..+.+..|.. |.... .++.+ +..++++
T Consensus 199 s~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~ 278 (323)
T KOG0594|consen 199 STSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDG 278 (323)
T ss_pred CCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccH
Confidence 9999999999999999999999999999999888876 22211 22221 1234689
Q ss_pred HHHHHHhhc-CccccCCCCCHHHHhcCCCcCCCC
Q 012988 367 KDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDVV 399 (452)
Q Consensus 367 ~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~~ 399 (452)
.+|+.+||+ +|.+|. ++..++.||||..+.
T Consensus 279 ~dll~~~L~y~p~~R~---Sa~~al~h~yf~~~~ 309 (323)
T KOG0594|consen 279 IELLSKLLQYDPAKRI---SAKGALTHPYFSELP 309 (323)
T ss_pred HHHHHHHhccCcccCc---CHHHHhcChhhcccc
Confidence 999999999 999999 999999999999763
No 87
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=4.4e-49 Score=379.15 Aligned_cols=274 Identities=35% Similarity=0.683 Sum_probs=227.0
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
.|++.+.||+|+||.||+|.+..+++.||+|.+.+...........+..|+.+++.++|++|+.+++.+.+.+.+|+|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 37889999999999999999999999999999876544433344567789999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 167 YLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 167 ~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
|++||+|.+++... ..+++..+..++.|++.||.|||+.||+||||||+|||++.++.++|+|||++.......
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~---- 156 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---- 156 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc----
Confidence 99999999988543 368999999999999999999999999999999999999999999999999986542110
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHH
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 324 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvi 324 (452)
......||+.|+|||++.+..++.++|||||||+
T Consensus 157 ----------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~ 190 (285)
T cd05630 157 ----------------------------------------------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCL 190 (285)
T ss_pred ----------------------------------------------cccCCCCCccccChHHHcCCCCCCccccHHHHHH
Confidence 0113469999999999999999999999999999
Q ss_pred HHHhhhCCCCCCCCChH---HHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC--CHHHHhcCCCcCCC
Q 012988 325 MYEMLVGYPPFYADDPI---TTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG--GAHQIKAHPWFKDV 398 (452)
Q Consensus 325 l~elltG~~Pf~~~~~~---~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~--~~~eil~hp~f~~~ 398 (452)
+|+|++|..||...... .....+... ....++ ..+++++++||.+||+ ||.+|++.. ++.++++||||+.+
T Consensus 191 l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05630 191 LYEMIAGQSPFQQRKKKIKREEVERLVKE-VQEEYS--EKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI 267 (285)
T ss_pred HHHHHhCCCCCCCCCccchHHHHHhhhhh-hhhhcC--ccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence 99999999999865432 122222211 111222 3578999999999999 999999321 29999999999999
Q ss_pred Ccccccc--CCCCcccc
Q 012988 399 VWDKLYE--MEAAFKPE 413 (452)
Q Consensus 399 ~~~~l~~--~~~~~~p~ 413 (452)
+|..+.. ..|+|+|.
T Consensus 268 ~~~~~~~~~~~~~~~~~ 284 (285)
T cd05630 268 NFKRLEAGMLEPPFKPD 284 (285)
T ss_pred CHHHHhcCCCCCCCCCC
Confidence 9998753 66778775
No 88
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=7.1e-49 Score=376.10 Aligned_cols=266 Identities=32% Similarity=0.570 Sum_probs=218.6
Q ss_pred eccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeecCCCCh
Q 012988 94 IGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDM 173 (452)
Q Consensus 94 LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~ggsL 173 (452)
||+|+||+||+++.+.+|+.||+|++.+...........+..|+++++.++||||+++++++.+...+|+||||++||+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 79999999999999999999999999765544333344566799999999999999999999999999999999999999
Q ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccccccC
Q 012988 174 MTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTID 251 (452)
Q Consensus 174 ~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~ 251 (452)
..++... ..+++..+..++.|++.||.|||+.||+||||||+|||++.++.++|+|||++.......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~----------- 149 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK----------- 149 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-----------
Confidence 9888554 358888999999999999999999999999999999999999999999999987653110
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhhC
Q 012988 252 DENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVG 331 (452)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~elltG 331 (452)
......||+.|+|||++.+..++.++|||||||++|+|++|
T Consensus 150 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g 190 (277)
T cd05607 150 ---------------------------------------TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAG 190 (277)
T ss_pred ---------------------------------------eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhC
Confidence 01134689999999999998899999999999999999999
Q ss_pred CCCCCCCCh----HHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC-CHHHHhcCCCcCCCCccccc-
Q 012988 332 YPPFYADDP----ITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG-GAHQIKAHPWFKDVVWDKLY- 404 (452)
Q Consensus 332 ~~Pf~~~~~----~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~-~~~eil~hp~f~~~~~~~l~- 404 (452)
..||..... ......+.. ....++. ..+++++++||.+||. ||.+|++.. -..+++.||||+.++|..+.
T Consensus 191 ~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~~~~~~ 267 (277)
T cd05607 191 RTPFKDHKEKVAKEELKRRTLE--DEVKFEH-QNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINFPRLEA 267 (277)
T ss_pred CCCCCCCcchhhHHHHHHHhhc--ccccccc-ccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCHHHHhc
Confidence 999976433 222222222 2222222 3689999999999999 999999321 12788999999999999986
Q ss_pred -cCCCCccc
Q 012988 405 -EMEAAFKP 412 (452)
Q Consensus 405 -~~~~~~~p 412 (452)
..++||.|
T Consensus 268 ~~~~~~~~~ 276 (277)
T cd05607 268 GLIPPPFVP 276 (277)
T ss_pred CcCCCCCCC
Confidence 45677765
No 89
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=6.9e-49 Score=377.75 Aligned_cols=258 Identities=34% Similarity=0.491 Sum_probs=215.7
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++++.||+|+||+||+|+++.+++.||+|++..... .......+.+|+.+++.++||||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE-NEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc-cccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence 479999999999999999999999999999999976532 2234566788999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
||++++.+..+......+++..++.++.|++.||.|||+.||+||||||+|||++.++.+||+|||++..+.....
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~---- 155 (287)
T cd07848 80 EYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN---- 155 (287)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc----
Confidence 9999887776655556799999999999999999999999999999999999999999999999999886531100
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 325 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil 325 (452)
.......||+.|+|||++.+..++.++|||||||++
T Consensus 156 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil 191 (287)
T cd07848 156 --------------------------------------------ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCIL 191 (287)
T ss_pred --------------------------------------------ccccccccccccCCcHHHcCCCCCCchhHHhHHHHH
Confidence 001134689999999999998999999999999999
Q ss_pred HHhhhCCCCCCCCChHHHHHHHhhccCc-----------------ccCCC-----------CCCCChhHHHHHHHhhc-C
Q 012988 326 YEMLVGYPPFYADDPITTCRKIVHWRNH-----------------LKFPD-----------DSKLSPEAKDLICRLLC-D 376 (452)
Q Consensus 326 ~elltG~~Pf~~~~~~~~~~~i~~~~~~-----------------~~~p~-----------~~~~s~~~~dLi~~mL~-d 376 (452)
|+|++|++||.+.+.......+...... ..+|. ...+|.++.+||++||. |
T Consensus 192 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~ 271 (287)
T cd07848 192 GELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLN 271 (287)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCC
Confidence 9999999999887765554444321111 11111 01368889999999999 9
Q ss_pred ccccCCCCCHHHHhcCCCc
Q 012988 377 VEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 377 p~~R~~~~~~~eil~hp~f 395 (452)
|.+|+ +++++++||||
T Consensus 272 P~~R~---s~~~~l~hp~f 287 (287)
T cd07848 272 PTDRY---LTEQCLNHPAF 287 (287)
T ss_pred cccCC---CHHHHhcCCCC
Confidence 99999 99999999998
No 90
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=6.8e-49 Score=378.40 Aligned_cols=256 Identities=29% Similarity=0.476 Sum_probs=214.1
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
.++|++++.||.|+||+||+|.++.++..||+|++..... ......+.+|+.+++.++||||+++++++.+.+.+|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLV 81 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc--CCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence 4789999999999999999999999999999999865432 22234577899999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 165 MEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
|||++ |+|.+++... ..+++..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+++......
T Consensus 82 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~--- 157 (288)
T cd07871 82 FEYLD-SDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPT--- 157 (288)
T ss_pred EeCCC-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCC---
Confidence 99996 5899888654 458999999999999999999999999999999999999999999999999987542110
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchhhhhh
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDWWSLG 322 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~DiwSlG 322 (452)
.......||+.|+|||++.+ ..++.++||||||
T Consensus 158 ----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG 191 (288)
T cd07871 158 ----------------------------------------------KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVG 191 (288)
T ss_pred ----------------------------------------------ccccCceecccccChHHhcCCcccCcHHHHHHHH
Confidence 00113468999999999875 5689999999999
Q ss_pred HHHHHhhhCCCCCCCCChHHHHHHHhhccCc-----------------ccCCC---------CCCCChhHHHHHHHhhc-
Q 012988 323 AIMYEMLVGYPPFYADDPITTCRKIVHWRNH-----------------LKFPD---------DSKLSPEAKDLICRLLC- 375 (452)
Q Consensus 323 vil~elltG~~Pf~~~~~~~~~~~i~~~~~~-----------------~~~p~---------~~~~s~~~~dLi~~mL~- 375 (452)
|++|+|++|++||.+.+..+.+..+...... ..+|. ...++.+++|||.+||+
T Consensus 192 ~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~ 271 (288)
T cd07871 192 CILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLY 271 (288)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCc
Confidence 9999999999999988877666555431110 01111 12468899999999999
Q ss_pred CccccCCCCCHHHHhcCCCc
Q 012988 376 DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 376 dp~~R~~~~~~~eil~hp~f 395 (452)
||.+|+ |+.|+++||||
T Consensus 272 dp~~R~---t~~~~l~hp~f 288 (288)
T cd07871 272 ETKSRI---SAEAALRHSYF 288 (288)
T ss_pred CcccCC---CHHHHhcCCCC
Confidence 999999 99999999998
No 91
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=9.2e-49 Score=380.20 Aligned_cols=261 Identities=28% Similarity=0.437 Sum_probs=211.4
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
.++|++++.||.|+||+||+|.++.+++.||+|++..... ......+.+|+.+++.++||||+++++++.+....|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--EGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--cccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence 4789999999999999999999999999999999875432 22234567899999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 165 MEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
|||++ ++|.+++... +.+++..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+++......
T Consensus 82 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--- 157 (303)
T cd07869 82 FEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS--- 157 (303)
T ss_pred EECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC---
Confidence 99995 6787777553 578999999999999999999999999999999999999999999999999987532110
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchhhhhh
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDWWSLG 322 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~DiwSlG 322 (452)
.......||+.|+|||++.+ ..++.++||||||
T Consensus 158 ----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG 191 (303)
T cd07869 158 ----------------------------------------------HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVG 191 (303)
T ss_pred ----------------------------------------------ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHH
Confidence 01123468999999999875 4579999999999
Q ss_pred HHHHHhhhCCCCCCCCChH-HHHHHHhhccCcc---------cC------------C-------CCCCCChhHHHHHHHh
Q 012988 323 AIMYEMLVGYPPFYADDPI-TTCRKIVHWRNHL---------KF------------P-------DDSKLSPEAKDLICRL 373 (452)
Q Consensus 323 vil~elltG~~Pf~~~~~~-~~~~~i~~~~~~~---------~~------------p-------~~~~~s~~~~dLi~~m 373 (452)
|++|+|++|..||.+..+. ..+..+....... .. + ....+++.+++||.+|
T Consensus 192 ~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~m 271 (303)
T cd07869 192 CIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKL 271 (303)
T ss_pred HHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHH
Confidence 9999999999999875432 2333322100000 00 0 0012457899999999
Q ss_pred hc-CccccCCCCCHHHHhcCCCcCCCCc
Q 012988 374 LC-DVEHRLGTGGAHQIKAHPWFKDVVW 400 (452)
Q Consensus 374 L~-dp~~R~~~~~~~eil~hp~f~~~~~ 400 (452)
|+ ||.+|+ |+.++++||||+++.+
T Consensus 272 L~~dp~~R~---s~~~~l~h~~f~~~~~ 296 (303)
T cd07869 272 LQCFPKNRL---SAQAALSHEYFSDLPP 296 (303)
T ss_pred hccCchhcc---CHHHHhcCcccccCCh
Confidence 99 999999 9999999999998764
No 92
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=4.1e-48 Score=376.02 Aligned_cols=303 Identities=40% Similarity=0.733 Sum_probs=249.9
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++++.||+|+||.||+|.+..+++.||+|.+.+...........+.+|+.+++.++||||+++++.+...+++|+||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 47999999999999999999999999999999987765444445567889999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
||++|++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||++.+|.++|+|||+++...........
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (305)
T cd05609 81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLY 160 (305)
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccccc
Confidence 99999999999988888999999999999999999999999999999999999999999999999998743211100000
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 325 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil 325 (452)
... ... ...........|+..|+|||.+.+..++.++|+|||||++
T Consensus 161 ~~~----------------~~~------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl 206 (305)
T cd05609 161 EGH----------------IEK------------------DTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIIL 206 (305)
T ss_pred ccc----------------ccc------------------chhhccccCCccCccccCchhccCCCCCchhhHHHHHHHH
Confidence 000 000 0000011134688999999999988899999999999999
Q ss_pred HHhhhCCCCCCCCChHHHHHHHhhccCcccCCCC-CCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCCCcccc
Q 012988 326 YEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDD-SKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDVVWDKL 403 (452)
Q Consensus 326 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~-~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~~~~~l 403 (452)
|+|++|..||.+.+..+....+.... ...|.. ..+++++.+||.+||. ||.+||+..++.++++||||...+|..+
T Consensus 207 ~el~~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~~~~~ 284 (305)
T cd05609 207 YEFLVGCVPFFGDTPEELFGQVISDD--IEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDWNGL 284 (305)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHhcc--cCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCCHHHH
Confidence 99999999999888777777665532 223322 2578999999999999 9999997777999999999999999999
Q ss_pred ccCCCCccccCCCCccCCCCC
Q 012988 404 YEMEAAFKPEINGELDTQNFM 424 (452)
Q Consensus 404 ~~~~~~~~p~~~~~~~~~~~~ 424 (452)
.+....+.|.+....+..+|+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~ 305 (305)
T cd05609 285 LRQKAEFIPQLESEDDTSYFD 305 (305)
T ss_pred hhcCCCCCCCCCCccccccCC
Confidence 877778889888777777653
No 93
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-50 Score=383.16 Aligned_cols=257 Identities=33% Similarity=0.560 Sum_probs=231.4
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
+=|.+.+.||+|-|++|-+|++--||..||||++.+..+.. -...++..|+..|+.++|||||++|++......+|+|+
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~-~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDT-LSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccch-hhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 45899999999999999999999999999999999876533 33467888999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEE-CCCCcEEEeeccCCccCCCCcchh
Q 012988 166 EYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLL-DKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 166 E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl-~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
|+-++|+|+++|.+. ..+.|+.++.|++||+.|+.|+|+.++|||||||+||.+ ..-|-+||+|||++..+.++.
T Consensus 97 ELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~--- 173 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGK--- 173 (864)
T ss_pred EecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcc---
Confidence 999999999999775 679999999999999999999999999999999999976 456899999999998775432
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCC-Cccchhhhhh
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGY-GMECDWWSLG 322 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~-~~~~DiwSlG 322 (452)
...+.||++.|-|||++.+..| .+++||||||
T Consensus 174 -----------------------------------------------kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLG 206 (864)
T KOG4717|consen 174 -----------------------------------------------KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLG 206 (864)
T ss_pred -----------------------------------------------hhhcccchhhccCchhhhcCccCCcchhhhHHH
Confidence 2347899999999999999999 4689999999
Q ss_pred HHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCCCc
Q 012988 323 AIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDVVW 400 (452)
Q Consensus 323 vil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~~~ 400 (452)
||||.|++|++||...++.+++-.|+.++. ..| +.+|.+++|||..||. ||.+|. +.++|..|+|++.++-
T Consensus 207 VILyMLVCGq~PFqeANDSETLTmImDCKY--tvP--shvS~eCrdLI~sMLvRdPkkRA---slEeI~s~~Wlq~~D~ 278 (864)
T KOG4717|consen 207 VILYMLVCGQPPFQEANDSETLTMIMDCKY--TVP--SHVSKECRDLIQSMLVRDPKKRA---SLEEIVSTSWLQAGDR 278 (864)
T ss_pred HHHHHHHhCCCccccccchhhhhhhhcccc--cCc--hhhhHHHHHHHHHHHhcCchhhc---cHHHHhccccccCCCC
Confidence 999999999999999999999999987543 344 4899999999999998 999999 9999999999998764
No 94
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.8e-48 Score=372.62 Aligned_cols=277 Identities=32% Similarity=0.611 Sum_probs=230.3
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
.|+..+.||+|+||+||+|.+..+++.||+|++.+...........+.+|+.+++.++|+||+.+++++.+++.+|+|||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 37888999999999999999999999999999976654444444567789999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 167 YLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 167 ~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
|+++++|..++... ..+++..+..++.|++.||.|||+.||+||||||+|||++.++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~---- 156 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE---- 156 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC----
Confidence 99999999888653 469999999999999999999999999999999999999999999999999986542110
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHH
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 324 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvi 324 (452)
......||+.|+|||++.+..++.++|+|||||+
T Consensus 157 ----------------------------------------------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~ 190 (285)
T cd05632 157 ----------------------------------------------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCL 190 (285)
T ss_pred ----------------------------------------------cccCCCCCcCccChHHhcCCCCCcccchHHHHHH
Confidence 0113468999999999998899999999999999
Q ss_pred HHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC--CHHHHhcCCCcCCCCcc
Q 012988 325 MYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG--GAHQIKAHPWFKDVVWD 401 (452)
Q Consensus 325 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~--~~~eil~hp~f~~~~~~ 401 (452)
+|+|++|..||.+.........+..............++.++.+||.+||. ||.+|++.. .+.+++.||||+.++|.
T Consensus 191 l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~ 270 (285)
T cd05632 191 IYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFK 270 (285)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCHH
Confidence 999999999998776554433333211111112223678999999999999 999999421 38999999999999999
Q ss_pred ccc--cCCCCcccc
Q 012988 402 KLY--EMEAAFKPE 413 (452)
Q Consensus 402 ~l~--~~~~~~~p~ 413 (452)
.+. +..++|.|.
T Consensus 271 ~~~~~~~~~~~~~~ 284 (285)
T cd05632 271 RLEAGMLDPPFVPD 284 (285)
T ss_pred HHhcCcCCCCCCCC
Confidence 875 466778774
No 95
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-48 Score=381.62 Aligned_cols=254 Identities=28% Similarity=0.453 Sum_probs=219.3
Q ss_pred CCCCCCCeeEeceeccCCCeEEEEEEEccCCCE-EEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC
Q 012988 81 HKICVDDFELLTIIGRGAFGEVRLCREKKSGNI-YAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE 159 (452)
Q Consensus 81 ~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~-vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~ 159 (452)
..+..++..+...||.|+||+||+|.++ |.. ||+|++......... .+.+.+|+.+|..++|||||++++++.+..
T Consensus 36 ~~i~~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~~~ 112 (362)
T KOG0192|consen 36 EEIDPDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTSPP 112 (362)
T ss_pred eecChHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 3444566677778999999999988876 666 999999876544333 678999999999999999999999999887
Q ss_pred -eEEEEEeecCCCChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCCCcEEECCCC-cEEEeeccCCc
Q 012988 160 -YLYLIMEYLPGGDMMTLLMR--EDTLTENVARFYIAQSVLAIESIHKHN-YIHRDIKPDNLLLDKNG-HMKLSDFGLCK 234 (452)
Q Consensus 160 -~~~lV~E~~~ggsL~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~g-ivHrDlkp~NILl~~~g-~ikl~DFGla~ 234 (452)
.+++||||+++|+|..++.. ...++...+..++.+|+.||+|||+++ ||||||||+|||++.++ ++||+|||+++
T Consensus 113 ~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr 192 (362)
T KOG0192|consen 113 GSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSR 192 (362)
T ss_pred CceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccce
Confidence 79999999999999999988 688999999999999999999999999 99999999999999998 99999999998
Q ss_pred cCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhcc--CCCC
Q 012988 235 PLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLL--KKGY 312 (452)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~--~~~~ 312 (452)
...... ...+...||+.|||||++. ...|
T Consensus 193 ~~~~~~-------------------------------------------------~~~~~~~GT~~wMAPEv~~~~~~~~ 223 (362)
T KOG0192|consen 193 EKVISK-------------------------------------------------TSMTSVAGTYRWMAPEVLRGEKSPY 223 (362)
T ss_pred eecccc-------------------------------------------------ccccCCCCCccccChhhhcCCCCcC
Confidence 653210 0112357999999999999 5699
Q ss_pred CccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 313 GMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 313 ~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
+.++|||||||++|||+||..||.+.........+......+.+|. .+++.+..||.+|+. ||..|| ++.+|+.
T Consensus 224 ~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~--~~~~~l~~l~~~CW~~dp~~RP---~f~ei~~ 298 (362)
T KOG0192|consen 224 TEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPK--ECPPHLSSLMERCWLVDPSRRP---SFLEIVS 298 (362)
T ss_pred CccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCc--cCCHHHHHHHHHhCCCCCCcCC---CHHHHHH
Confidence 9999999999999999999999999998777777776666666665 489999999999998 999999 7777653
No 96
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-49 Score=369.24 Aligned_cols=253 Identities=31% Similarity=0.544 Sum_probs=214.6
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC-----Ce
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT-----EY 160 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~-----~~ 160 (452)
=.|.-.+++|.|+||.||.|....+++.||||++..+.-. -.+|..||+.++|||||+|..+|... -+
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~-------knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ 96 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY-------KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVY 96 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc-------CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhH
Confidence 3588899999999999999999999999999988654321 23699999999999999999998632 25
Q ss_pred EEEEEeecCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCC-CcEEEeeccCCcc
Q 012988 161 LYLIMEYLPGGDMMTLLMR----EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKN-GHMKLSDFGLCKP 235 (452)
Q Consensus 161 ~~lV~E~~~ggsL~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~-g~ikl~DFGla~~ 235 (452)
..+|||||| .+|..+++. +..++.-.++.|..||+.||.|||+.||+||||||.|||+|.+ |.+||||||.|+.
T Consensus 97 lnlVleymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 97 LNLVLEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKV 175 (364)
T ss_pred HHHHHHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCccee
Confidence 679999995 588888864 5789999999999999999999999999999999999999987 8999999999998
Q ss_pred CCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCc
Q 012988 236 LDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGM 314 (452)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~ 314 (452)
+..+. ...+..-|+.|+|||.+.+ ..|+.
T Consensus 176 L~~~e--------------------------------------------------pniSYicSRyYRaPELifga~~Yt~ 205 (364)
T KOG0658|consen 176 LVKGE--------------------------------------------------PNISYICSRYYRAPELIFGATEYTT 205 (364)
T ss_pred eccCC--------------------------------------------------CceeEEEeccccCHHHHcCccccCc
Confidence 75332 1235678999999999997 67999
Q ss_pred cchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccC---------------cccCCC----------CCCCChhHHHH
Q 012988 315 ECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRN---------------HLKFPD----------DSKLSPEAKDL 369 (452)
Q Consensus 315 ~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~---------------~~~~p~----------~~~~s~~~~dL 369 (452)
+.||||.||++.||+-|++.|.|.+...++..|...-+ ...+|. ...+++++.||
T Consensus 206 ~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dl 285 (364)
T KOG0658|consen 206 SIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDL 285 (364)
T ss_pred eeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHH
Confidence 99999999999999999999999998888887765211 122221 13478999999
Q ss_pred HHHhhc-CccccCCCCCHHHHhcCCCcCCCC
Q 012988 370 ICRLLC-DVEHRLGTGGAHQIKAHPWFKDVV 399 (452)
Q Consensus 370 i~~mL~-dp~~R~~~~~~~eil~hp~f~~~~ 399 (452)
+.++|. +|.+|. ++.|++.||||+.+.
T Consensus 286 l~~~L~Y~P~~R~---~~~~~l~h~fFdelr 313 (364)
T KOG0658|consen 286 LSKLLQYSPSKRL---SALEALAHPFFDELR 313 (364)
T ss_pred HHHHhccChhhcC---CHHHHhcchhhHHhh
Confidence 999999 999999 999999999998643
No 97
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-51 Score=385.65 Aligned_cols=256 Identities=31% Similarity=0.504 Sum_probs=227.0
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
..|..+..||+|+||.||+|.+..+++.||+|++.-.. ....++.++.|+.+|..++++||.++|+.|..+..++++|
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~--~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE--AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhh--cchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence 45888899999999999999999999999999997654 3456788999999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
|||.||++.+++...+.+.+..+..++++++.||.|||..+.+|||||+.|||+..+|.+||+|||++..+...
T Consensus 91 ey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~------ 164 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNT------ 164 (467)
T ss_pred HHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeech------
Confidence 99999999999988888899999999999999999999999999999999999999999999999999876421
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 325 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil 325 (452)
.....+++|||.|||||++.+.+|+.++||||||++.
T Consensus 165 -------------------------------------------~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITa 201 (467)
T KOG0201|consen 165 -------------------------------------------VKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITA 201 (467)
T ss_pred -------------------------------------------hhccccccccccccchhhhccccccchhhhhhhhHHH
Confidence 1123588999999999999999999999999999999
Q ss_pred HHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCC
Q 012988 326 YEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 326 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
+||++|.+|+....+...+..|-+. .++.+. ..+|+.+++||..||. ||+.|| +|.++|+|+|.+..
T Consensus 202 iEla~GePP~s~~hPmrvlflIpk~-~PP~L~--~~~S~~~kEFV~~CL~k~P~~Rp---sA~~LLKh~FIk~a 269 (467)
T KOG0201|consen 202 IELAKGEPPHSKLHPMRVLFLIPKS-APPRLD--GDFSPPFKEFVEACLDKNPEFRP---SAKELLKHKFIKRA 269 (467)
T ss_pred HHHhcCCCCCcccCcceEEEeccCC-CCCccc--cccCHHHHHHHHHHhhcCcccCc---CHHHHhhhHHHHhc
Confidence 9999999999988885555444431 122222 2689999999999999 999999 99999999999863
No 98
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=2.3e-47 Score=372.52 Aligned_cols=308 Identities=38% Similarity=0.665 Sum_probs=242.9
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++.+.||+|+||+||+|.+..++..||+|.+.+...........+..|+.+++.++||||+++++.+.+....|+||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 47999999999999999999999999999999998765544445677889999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 166 EYLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 166 E~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
||+.|++|.+++... ..+++..++.++.|++.||.|||+.||+||||||+||+++.+|.++|+|||++..........
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV 160 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence 999999999998754 578999999999999999999999999999999999999999999999999988654221100
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhH
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 323 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGv 323 (452)
....... .. ..+.... .................||..|+|||++.+..++.++||||||+
T Consensus 161 ~~~~~~~---------------~~--~~~~~~~---~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ 220 (316)
T cd05574 161 SKALRKG---------------SR--RSSVNSI---PSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGI 220 (316)
T ss_pred ccccccc---------------cc--ccccccc---chhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHH
Confidence 0000000 00 0000000 00000000111223467999999999999988999999999999
Q ss_pred HHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC-CHHHHhcCCCcCCCCcc
Q 012988 324 IMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG-GAHQIKAHPWFKDVVWD 401 (452)
Q Consensus 324 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~-~~~eil~hp~f~~~~~~ 401 (452)
++|+|++|..||.+.+....+..+.. ....++....++..++++|.+||. ||.+|++.. ++++++.||||++++|.
T Consensus 221 ll~~l~~g~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~~ 298 (316)
T cd05574 221 LLYEMLYGTTPFKGSNRDETFSNILK--KEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNWA 298 (316)
T ss_pred HHHHHhhCCCCCCCCchHHHHHHHhc--CCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCChh
Confidence 99999999999998888777776664 344555544578999999999998 999999211 29999999999999999
Q ss_pred ccccCCCCccccCC
Q 012988 402 KLYEMEAAFKPEIN 415 (452)
Q Consensus 402 ~l~~~~~~~~p~~~ 415 (452)
.+.-..+|-.|.+.
T Consensus 299 ~~~~~~~~~~~~~~ 312 (316)
T cd05574 299 LIRHTTPPIIPRPD 312 (316)
T ss_pred hcccCCCCCCCCcc
Confidence 98776666665553
No 99
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.2e-47 Score=377.23 Aligned_cols=261 Identities=26% Similarity=0.415 Sum_probs=219.5
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEE
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLY 162 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~ 162 (452)
+..++|++++.||+|+||.||+|++..+|..||+|++.... .......+.+|+.+++.++||||+++++++.+.+.++
T Consensus 2 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (331)
T cd06649 2 LKDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 79 (331)
T ss_pred CCcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 34689999999999999999999999999999999987542 2233467889999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 163 LIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKH-NYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 163 lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~-givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
+||||+++|+|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++.+|.+||+|||++..+...
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 157 (331)
T cd06649 80 ICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 157 (331)
T ss_pred EEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc--
Confidence 9999999999999998888899999999999999999999986 6999999999999999999999999998754211
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSL 321 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSl 321 (452)
......||+.|+|||++.+..++.++|||||
T Consensus 158 -------------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~Diwsl 188 (331)
T cd06649 158 -------------------------------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSM 188 (331)
T ss_pred -------------------------------------------------ccccCCCCcCcCCHhHhcCCCCCchHhHHHH
Confidence 0113469999999999999999999999999
Q ss_pred hHHHHHhhhCCCCCCCCChHHHHHHHhh------------------------------------------c---cCcccC
Q 012988 322 GAIMYEMLVGYPPFYADDPITTCRKIVH------------------------------------------W---RNHLKF 356 (452)
Q Consensus 322 Gvil~elltG~~Pf~~~~~~~~~~~i~~------------------------------------------~---~~~~~~ 356 (452)
||++|+|++|+.||...+..+....+.. + ......
T Consensus 189 G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (331)
T cd06649 189 GLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKL 268 (331)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCC
Confidence 9999999999999976655433221110 0 000111
Q ss_pred CCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCCCc
Q 012988 357 PDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDVVW 400 (452)
Q Consensus 357 p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~~~ 400 (452)
+ ...+++++++||.+||. ||++|| ++.+|++||||+....
T Consensus 269 ~-~~~~~~~l~~li~~~L~~~P~~Rp---t~~ell~h~~~~~~~~ 309 (331)
T cd06649 269 P-NGVFTPDFQEFVNKCLIKNPAERA---DLKMLMNHTFIKRSEV 309 (331)
T ss_pred C-CccccHHHHHHHHHHccCCcccCC---CHHHHhcChHHhhccc
Confidence 1 12468899999999999 999999 9999999999986443
No 100
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.1e-47 Score=378.01 Aligned_cols=263 Identities=27% Similarity=0.416 Sum_probs=212.6
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC-----CeE
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT-----EYL 161 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~-----~~~ 161 (452)
+|++.+.||+|+||.||+|.++.+|..||||++.... ........+.+|+.+++.++||||+++++++... ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVF-EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhh-ccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 5999999999999999999999999999999986432 1222345678899999999999999999988543 358
Q ss_pred EEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 162 YLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
|+||||| +++|.+++.....+++..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+++.......
T Consensus 80 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~ 158 (338)
T cd07859 80 YVVFELM-ESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 158 (338)
T ss_pred EEEEecC-CCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccC
Confidence 9999999 579999998888899999999999999999999999999999999999999999999999999875421100
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC--CCCCccchhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK--KGYGMECDWW 319 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~--~~~~~~~Diw 319 (452)
........+||+.|+|||++.+ ..++.++|||
T Consensus 159 ----------------------------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~Dvw 192 (338)
T cd07859 159 ----------------------------------------------TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIW 192 (338)
T ss_pred ----------------------------------------------ccccccCCCCCCCcCCHHHHhccccccCchhHHH
Confidence 0001124579999999999876 6789999999
Q ss_pred hhhHHHHHhhhCCCCCCCCChHHHHHHHhhcc--------------------------CcccC-CCCCCCChhHHHHHHH
Q 012988 320 SLGAIMYEMLVGYPPFYADDPITTCRKIVHWR--------------------------NHLKF-PDDSKLSPEAKDLICR 372 (452)
Q Consensus 320 SlGvil~elltG~~Pf~~~~~~~~~~~i~~~~--------------------------~~~~~-p~~~~~s~~~~dLi~~ 372 (452)
||||++|+|++|++||.+.+.......+.... ....+ ...+.+++.+.+||.+
T Consensus 193 SlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 272 (338)
T cd07859 193 SIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLER 272 (338)
T ss_pred HHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHH
Confidence 99999999999999998766544332221100 00000 0112467889999999
Q ss_pred hhc-CccccCCCCCHHHHhcCCCcCCCCc
Q 012988 373 LLC-DVEHRLGTGGAHQIKAHPWFKDVVW 400 (452)
Q Consensus 373 mL~-dp~~R~~~~~~~eil~hp~f~~~~~ 400 (452)
||. ||.+|| ++.++++||||+++..
T Consensus 273 ~l~~~P~~Rp---t~~e~l~hp~f~~~~~ 298 (338)
T cd07859 273 LLAFDPKDRP---TAEEALADPYFKGLAK 298 (338)
T ss_pred HcCcCcccCC---CHHHHhcCchhhhcCc
Confidence 999 999999 9999999999987654
No 101
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.5e-47 Score=383.99 Aligned_cols=256 Identities=24% Similarity=0.353 Sum_probs=210.2
Q ss_pred CCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeE
Q 012988 82 KICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYL 161 (452)
Q Consensus 82 ~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~ 161 (452)
.+...+|++++.||+|+||.||+|.+..+++.||+|+... ..+.+|+.+++.++||||++++++|......
T Consensus 88 ~~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~ 158 (391)
T PHA03212 88 GIEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAINHPSIIQLKGTFTYNKFT 158 (391)
T ss_pred ccccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhCCCCCCCCEeEEEEECCee
Confidence 4556789999999999999999999999999999996532 2467899999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 162 YLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
|+|||++ +++|..++.....+++..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+|+......
T Consensus 159 ~lv~e~~-~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~- 236 (391)
T PHA03212 159 CLILPRY-KTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN- 236 (391)
T ss_pred EEEEecC-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccccc-
Confidence 9999999 57899999888889999999999999999999999999999999999999999999999999987432100
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSL 321 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSl 321 (452)
.......+||+.|+|||++.+..++.++|||||
T Consensus 237 -----------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 269 (391)
T PHA03212 237 -----------------------------------------------ANKYYGWAGTIATNAPELLARDPYGPAVDIWSA 269 (391)
T ss_pred -----------------------------------------------ccccccccCccCCCChhhhcCCCCCcHHHHHHH
Confidence 001124579999999999999999999999999
Q ss_pred hHHHHHhhhCCCCCCCCC-------hHHHHHHHhhccCc------------------------c----cCCC---CCCCC
Q 012988 322 GAIMYEMLVGYPPFYADD-------PITTCRKIVHWRNH------------------------L----KFPD---DSKLS 363 (452)
Q Consensus 322 Gvil~elltG~~Pf~~~~-------~~~~~~~i~~~~~~------------------------~----~~p~---~~~~s 363 (452)
||++|+|++|..||...+ ....+..+...... . ..|. ...++
T Consensus 270 Gvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (391)
T PHA03212 270 GIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELP 349 (391)
T ss_pred HHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhh
Confidence 999999999998875432 11122222111000 0 0010 01346
Q ss_pred hhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCC
Q 012988 364 PEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 364 ~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
.++.+||.+||+ ||.+|| ++.|+++||||+.+
T Consensus 350 ~~l~~Li~~mL~~dP~~Rp---ta~elL~hp~f~~~ 382 (391)
T PHA03212 350 IDLEYLICKMLAFDAHHRP---SAEALLDFAAFQDI 382 (391)
T ss_pred hhHHHHHHHHhcCChhhCC---CHHHHhcChhhccC
Confidence 789999999999 999999 99999999999864
No 102
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.6e-47 Score=389.46 Aligned_cols=258 Identities=29% Similarity=0.457 Sum_probs=210.2
Q ss_pred CCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC---
Q 012988 82 KICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT--- 158 (452)
Q Consensus 82 ~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~--- 158 (452)
.....+|++++.||+|+||+||+|.+..++..||||++.... ....+|+.+|+.++||||++++++|...
T Consensus 62 ~~~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~ 134 (440)
T PTZ00036 62 RSPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLNHINIIFLKDYYYTECFK 134 (440)
T ss_pred cCcCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcCCCCCcceeeeEeecccc
Confidence 344578999999999999999999999999999999885432 2245699999999999999998887432
Q ss_pred -----CeEEEEEeecCCCChHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCC-cEEEe
Q 012988 159 -----EYLYLIMEYLPGGDMMTLLM----REDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNG-HMKLS 228 (452)
Q Consensus 159 -----~~~~lV~E~~~ggsL~~~l~----~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g-~ikl~ 228 (452)
..+++||||+++ +|..++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 135 ~~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~ 213 (440)
T PTZ00036 135 KNEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLC 213 (440)
T ss_pred cCCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeee
Confidence 257899999964 6766654 346799999999999999999999999999999999999999765 69999
Q ss_pred eccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhcc
Q 012988 229 DFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLL 308 (452)
Q Consensus 229 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~ 308 (452)
|||+|+.+.... .....+||+.|+|||++.
T Consensus 214 DFGla~~~~~~~--------------------------------------------------~~~~~~~t~~y~aPE~~~ 243 (440)
T PTZ00036 214 DFGSAKNLLAGQ--------------------------------------------------RSVSYICSRFYRAPELML 243 (440)
T ss_pred ccccchhccCCC--------------------------------------------------CcccCCCCcCccCHHHhc
Confidence 999998653110 112457899999999987
Q ss_pred C-CCCCccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccC---------------cccCCC----------CCCC
Q 012988 309 K-KGYGMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRN---------------HLKFPD----------DSKL 362 (452)
Q Consensus 309 ~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~---------------~~~~p~----------~~~~ 362 (452)
+ ..|+.++|||||||++|||++|.+||.+.+..+.+..+..... .+.+|. +...
T Consensus 244 ~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~ 323 (440)
T PTZ00036 244 GATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGT 323 (440)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCC
Confidence 6 4689999999999999999999999998887776666543211 111121 1246
Q ss_pred ChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCCCc
Q 012988 363 SPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDVVW 400 (452)
Q Consensus 363 s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~~~ 400 (452)
++++.+||.+||. ||.+|+ ++.|++.||||.++..
T Consensus 324 ~~~~~~li~~~L~~dP~~R~---ta~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 324 PDDAINFISQFLKYEPLKRL---NPIEALADPFFDDLRD 359 (440)
T ss_pred CHHHHHHHHHHCCCChhHCc---CHHHHhCChhHHhhhc
Confidence 7899999999999 999999 9999999999987654
No 103
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.8e-48 Score=375.67 Aligned_cols=257 Identities=33% Similarity=0.523 Sum_probs=232.3
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCe-EEE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEY-LYL 163 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~-~~l 163 (452)
.++|..++++|+|+||.+++++++.++..|++|.+.-.....+. .....+|+.+++++.|||||.+.+.|..++. +||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~-r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPE-RRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchh-hHHHHHHHHHHHhccCCCeeeeccchhcCCceEEE
Confidence 47899999999999999999999999999999999876544433 3467889999999999999999999998887 999
Q ss_pred EEeecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 164 IMEYLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 164 V~E~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
||+||+||+|.+.+.+. ..|+++.+..|+.|++.||.|||+++|+|||||+.||+++.++.|||+|||+|+.+++..
T Consensus 82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~- 160 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED- 160 (426)
T ss_pred EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCch-
Confidence 99999999999999664 479999999999999999999999999999999999999999999999999999875321
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSL 321 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSl 321 (452)
..+.+.+|||.||+||++.+.+|+.++|||||
T Consensus 161 ------------------------------------------------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsL 192 (426)
T KOG0589|consen 161 ------------------------------------------------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSL 192 (426)
T ss_pred ------------------------------------------------hhhheecCCCcccCHHHhCCCCCCccCcchhh
Confidence 23457899999999999999999999999999
Q ss_pred hHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 322 GAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 322 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
||++|||++-+++|.+.+......+|.... ..|.+...+.+++.||+.||. +|..|| ++.++|.+|....
T Consensus 193 GC~~yEm~~lk~aF~a~~m~~Li~ki~~~~---~~Plp~~ys~el~~lv~~~l~~~P~~RP---sa~~LL~~P~l~~ 263 (426)
T KOG0589|consen 193 GCCLYEMCTLKPAFKASNMSELILKINRGL---YSPLPSMYSSELRSLVKSMLRKNPEHRP---SALELLRRPHLLR 263 (426)
T ss_pred cchHHHHHhcccccCccchHHHHHHHhhcc---CCCCCccccHHHHHHHHHHhhcCCccCC---CHHHHhhChhhhh
Confidence 999999999999999999999999998643 445556889999999999998 999999 9999999998874
No 104
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.7e-47 Score=380.56 Aligned_cols=252 Identities=27% Similarity=0.432 Sum_probs=215.4
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhC-C-----CceeeEEEEEEcCCe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVA-S-----HCIVKLYYSFQDTEY 160 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-h-----p~iv~l~~~~~~~~~ 160 (452)
+|.|++.||+|+||.|-+|++..|++.||||+++... ........|+.||..|+ | -|+|+++++|...++
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k----~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK----RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh----HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 6899999999999999999999999999999997653 34456678999999997 3 389999999999999
Q ss_pred EEEEEeecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCC--cEEEeeccCCccC
Q 012988 161 LYLIMEYLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNG--HMKLSDFGLCKPL 236 (452)
Q Consensus 161 ~~lV~E~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g--~ikl~DFGla~~~ 236 (452)
+|||+|.+ +-+|+++|+.+ ..++...++.++.||+.||.+||+.||||+|||||||||..-+ .|||+|||.|...
T Consensus 263 lciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 263 LCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 99999999 77999999876 4689999999999999999999999999999999999997644 7999999998765
Q ss_pred CCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccc
Q 012988 237 DCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMEC 316 (452)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~ 316 (452)
... ..+.+.++.|+|||++.+.+|+.+.
T Consensus 342 ~q~----------------------------------------------------vytYiQSRfYRAPEVILGlpY~~~I 369 (586)
T KOG0667|consen 342 SQR----------------------------------------------------VYTYIQSRFYRAPEVILGLPYDTAI 369 (586)
T ss_pred CCc----------------------------------------------------ceeeeeccccccchhhccCCCCCcc
Confidence 311 1267889999999999999999999
Q ss_pred hhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccC--------------------------------------------
Q 012988 317 DWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRN-------------------------------------------- 352 (452)
Q Consensus 317 DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~-------------------------------------------- 352 (452)
||||||||++||++|.+.|.|.+..+.+..|+.-.+
T Consensus 370 DmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~ 449 (586)
T KOG0667|consen 370 DMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKY 449 (586)
T ss_pred ceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhh
Confidence 999999999999999999999999999888865100
Q ss_pred ------cccCC-CCC--------CCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCC
Q 012988 353 ------HLKFP-DDS--------KLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 353 ------~~~~p-~~~--------~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
....| ... .-...+.|||++||. ||..|+ ++.++|+||||...
T Consensus 450 ~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~---tp~qal~Hpfl~~~ 508 (586)
T KOG0667|consen 450 YRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERI---TPAQALNHPFLTGT 508 (586)
T ss_pred hhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcC---CHHHHhcCcccccc
Confidence 00011 000 012446899999999 999999 99999999999864
No 105
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=5.8e-47 Score=364.89 Aligned_cols=255 Identities=28% Similarity=0.459 Sum_probs=208.7
Q ss_pred CCeeEeceeccCCCeEEEEEEEcc-CCCEEEEEEeecchhcccchHHHHHHHHHHHHHh---CCCceeeEEEEEE-----
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKK-SGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV---ASHCIVKLYYSFQ----- 156 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l---~hp~iv~l~~~~~----- 156 (452)
.+|++++.||+|+||+||+|++.. ++..||+|++...... ........+|+.+++.+ +||||+++++++.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCC-CCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 369999999999999999999864 4688999998754322 22234456677777766 6999999999885
Q ss_pred cCCeEEEEEeecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCc
Q 012988 157 DTEYLYLIMEYLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCK 234 (452)
Q Consensus 157 ~~~~~~lV~E~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~ 234 (452)
....+++||||++ ++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+||+|||+++
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 158 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence 3456999999995 6899988653 458999999999999999999999999999999999999999999999999987
Q ss_pred cCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCc
Q 012988 235 PLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGM 314 (452)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~ 314 (452)
..... .......||+.|+|||++.+..++.
T Consensus 159 ~~~~~--------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~ 188 (290)
T cd07862 159 IYSFQ--------------------------------------------------MALTSVVVTLWYRAPEVLLQSSYAT 188 (290)
T ss_pred eccCC--------------------------------------------------cccccccccccccChHHHhCCCCCC
Confidence 54311 0112456899999999999999999
Q ss_pred cchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCc---------ccCCC--------------CCCCChhHHHHHH
Q 012988 315 ECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNH---------LKFPD--------------DSKLSPEAKDLIC 371 (452)
Q Consensus 315 ~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~---------~~~p~--------------~~~~s~~~~dLi~ 371 (452)
++|||||||++|+|++|.+||.+.+..+.+..+...... ..++. ...++..+++||.
T Consensus 189 ~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 268 (290)
T cd07862 189 PVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLL 268 (290)
T ss_pred ccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHH
Confidence 999999999999999999999998887777777642211 00000 1246788999999
Q ss_pred Hhhc-CccccCCCCCHHHHhcCCCc
Q 012988 372 RLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 372 ~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
+||+ ||.+|| ++.++++||||
T Consensus 269 ~~l~~~P~~R~---s~~~~l~hp~f 290 (290)
T cd07862 269 KCLTFNPAKRI---SAYSALSHPYF 290 (290)
T ss_pred HHhccCchhcC---CHHHHhcCCCC
Confidence 9999 999999 99999999998
No 106
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=4.7e-47 Score=378.87 Aligned_cols=260 Identities=28% Similarity=0.424 Sum_probs=215.9
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC-----eE
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE-----YL 161 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~-----~~ 161 (452)
+|++++.||+|+||+||+|.+..+|+.||||++.... ........+.+|+.+++.++||||+++++++...+ .+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF-QNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccc-cchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 5889999999999999999999999999999886432 12223456889999999999999999999998876 79
Q ss_pred EEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 162 YLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
|+||||+. ++|..++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 80 ~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~- 157 (372)
T cd07853 80 YVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE- 157 (372)
T ss_pred EEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCc-
Confidence 99999995 6898888888889999999999999999999999999999999999999999999999999987542110
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC-CCCccchhhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK-GYGMECDWWS 320 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~-~~~~~~DiwS 320 (452)
........||+.|+|||++.+. .++.++||||
T Consensus 158 -----------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws 190 (372)
T cd07853 158 -----------------------------------------------SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWS 190 (372)
T ss_pred -----------------------------------------------cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHh
Confidence 0011134689999999999874 4799999999
Q ss_pred hhHHHHHhhhCCCCCCCCChHHHHHHHhhccC---------------------cccC-------CCCCCCChhHHHHHHH
Q 012988 321 LGAIMYEMLVGYPPFYADDPITTCRKIVHWRN---------------------HLKF-------PDDSKLSPEAKDLICR 372 (452)
Q Consensus 321 lGvil~elltG~~Pf~~~~~~~~~~~i~~~~~---------------------~~~~-------p~~~~~s~~~~dLi~~ 372 (452)
|||++|+|++|+.||.+.+....+..+....+ .... ......++++.+||.+
T Consensus 191 lG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 270 (372)
T cd07853 191 VGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCR 270 (372)
T ss_pred HHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHH
Confidence 99999999999999998887766655543111 0000 1112457899999999
Q ss_pred hhc-CccccCCCCCHHHHhcCCCcCCCC
Q 012988 373 LLC-DVEHRLGTGGAHQIKAHPWFKDVV 399 (452)
Q Consensus 373 mL~-dp~~R~~~~~~~eil~hp~f~~~~ 399 (452)
||+ ||.+|| ++.+++.||||.+..
T Consensus 271 mL~~dP~~R~---t~~e~l~hp~~~~~~ 295 (372)
T cd07853 271 MLVFDPDKRI---SAADALAHPYLDEGR 295 (372)
T ss_pred hCCCChhhCc---CHHHHhcCHhhCCCc
Confidence 999 999999 999999999999754
No 107
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3e-48 Score=353.68 Aligned_cols=262 Identities=30% Similarity=0.545 Sum_probs=220.7
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhC-CCceeeEEEEEEcCCeEEEEEeecCC
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVA-SHCIVKLYYSFQDTEYLYLIMEYLPG 170 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~~~~~~~lV~E~~~g 170 (452)
..||+|+|+.|--+....+|..||||++.|.. .....++.+|++++...+ |+||++++++|+++..+|+|||.|.|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~---gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~G 160 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP---GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRG 160 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCC---chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccC
Confidence 57999999999999999999999999998763 334578899999999995 99999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCc---EEEeeccCCccCCCCcchhhccc
Q 012988 171 GDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGH---MKLSDFGLCKPLDCSTLYAIHEH 247 (452)
Q Consensus 171 gsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~---ikl~DFGla~~~~~~~~~~~~~~ 247 (452)
|+|...|+++..|+|.++..+...|+.||.|||.+||.||||||+|||..+-.+ +|||||.|.........
T Consensus 161 GplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~------ 234 (463)
T KOG0607|consen 161 GPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNND------ 234 (463)
T ss_pred chHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCC------
Confidence 999999999999999999999999999999999999999999999999876554 79999998764321100
Q ss_pred cccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhcc-----CCCCCccchhhhhh
Q 012988 248 KTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLL-----KKGYGMECDWWSLG 322 (452)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~-----~~~~~~~~DiwSlG 322 (452)
|.| . ......+.+|+..|||||++. ...|+.+.|.||||
T Consensus 235 ----------------~sp--------a------------stP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLG 278 (463)
T KOG0607|consen 235 ----------------CSP--------A------------STPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLG 278 (463)
T ss_pred ----------------CCC--------C------------CCccccCcccchhhcchhHHhhhccccccccccccHHHHH
Confidence 000 0 001123678999999999874 24589999999999
Q ss_pred HHHHHhhhCCCCCCCCC---------------hHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCH
Q 012988 323 AIMYEMLVGYPPFYADD---------------PITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGA 386 (452)
Q Consensus 323 vil~elltG~~Pf~~~~---------------~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~ 386 (452)
||||-||.|++||.|.. ....+..|..+...++-.+|..+|.+++|||+.||. |+.+|+ ++
T Consensus 279 vIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rl---sa 355 (463)
T KOG0607|consen 279 VILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRL---SA 355 (463)
T ss_pred HHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhh---hh
Confidence 99999999999997642 455677787754444444567899999999999998 999999 99
Q ss_pred HHHhcCCCcCCCCcc
Q 012988 387 HQIKAHPWFKDVVWD 401 (452)
Q Consensus 387 ~eil~hp~f~~~~~~ 401 (452)
.++++|||++.+--+
T Consensus 356 ~~vlnhPw~~~~~~e 370 (463)
T KOG0607|consen 356 AQVLNHPWVQRCAPE 370 (463)
T ss_pred hhccCCccccccchh
Confidence 999999999976544
No 108
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.3e-46 Score=370.07 Aligned_cols=259 Identities=28% Similarity=0.409 Sum_probs=216.6
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEE
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLY 162 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~ 162 (452)
+..++|++.++||.|+||.||+|.+..++..+|+|++.... .......+.+|+.+++.++||||++++++|.+.+.+|
T Consensus 2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (333)
T cd06650 2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 79 (333)
T ss_pred cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEE
Confidence 34588999999999999999999999999999999886542 2233456889999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 163 LIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKH-NYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 163 lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~-givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
+||||+++|+|.+++...+.+++..+..++.|++.||.|||+. +|+||||||+|||++.+|.+||+|||++..+...
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-- 157 (333)
T cd06650 80 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 157 (333)
T ss_pred EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh--
Confidence 9999999999999998888899999999999999999999985 7999999999999999999999999998754211
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSL 321 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSl 321 (452)
......||+.|+|||++.+..++.++|||||
T Consensus 158 -------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dvwsl 188 (333)
T cd06650 158 -------------------------------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSM 188 (333)
T ss_pred -------------------------------------------------ccccCCCCccccCHHHhcCCCCCcHHHHHHH
Confidence 0113468999999999999889999999999
Q ss_pred hHHHHHhhhCCCCCCCCChHHHHHHHh----------------------------------------h---ccCcccCCC
Q 012988 322 GAIMYEMLVGYPPFYADDPITTCRKIV----------------------------------------H---WRNHLKFPD 358 (452)
Q Consensus 322 Gvil~elltG~~Pf~~~~~~~~~~~i~----------------------------------------~---~~~~~~~p~ 358 (452)
||++|+|++|+.||...........+. . ......++.
T Consensus 189 G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (333)
T cd06650 189 GLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPS 268 (333)
T ss_pred HHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCC
Confidence 999999999999997655433221110 0 000011111
Q ss_pred CCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCC
Q 012988 359 DSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 359 ~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
..++.++++||.+||+ ||.+|| ++.+++.||||+..
T Consensus 269 -~~~~~~~~~li~~~L~~~P~~Rp---t~~ell~h~~~~~~ 305 (333)
T cd06650 269 -GVFGAEFQDFVNKCLIKNPAERA---DLKQLMVHAFIKRS 305 (333)
T ss_pred -CCcCHHHHHHHHHhccCCcccCc---CHHHHhhCHHHhcC
Confidence 1367899999999999 999999 99999999999853
No 109
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=8.5e-47 Score=387.88 Aligned_cols=255 Identities=24% Similarity=0.439 Sum_probs=206.6
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCC------CceeeEEEEEE
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVAS------HCIVKLYYSFQ 156 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h------p~iv~l~~~~~ 156 (452)
...++|+++++||+|+||+||+|.+..+++.||||+++... ........|+.+++.+.| +++++++++|.
T Consensus 126 ~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 126 VSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred cCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 34578999999999999999999999999999999986432 122345667788777754 45889999987
Q ss_pred cC-CeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCCCcEEECCCC-----------
Q 012988 157 DT-EYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHK-HNYIHRDIKPDNLLLDKNG----------- 223 (452)
Q Consensus 157 ~~-~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~-~givHrDlkp~NILl~~~g----------- 223 (452)
.. .++|+|||++ |++|.+++.+.+.+++..++.++.||+.||.|||+ .|||||||||+|||++.++
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~ 280 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRAL 280 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccccccccccc
Confidence 65 5789999998 88999999888899999999999999999999998 5999999999999998776
Q ss_pred -----cEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccC
Q 012988 224 -----HMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGT 298 (452)
Q Consensus 224 -----~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt 298 (452)
.+||+|||++..... .....+||
T Consensus 281 ~~~~~~vkl~DfG~~~~~~~----------------------------------------------------~~~~~~gt 308 (467)
T PTZ00284 281 PPDPCRVRICDLGGCCDERH----------------------------------------------------SRTAIVST 308 (467)
T ss_pred CCCCceEEECCCCccccCcc----------------------------------------------------ccccccCC
Confidence 499999998753210 11246799
Q ss_pred CccccchhccCCCCCccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCccc----------------------C
Q 012988 299 PDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLK----------------------F 356 (452)
Q Consensus 299 ~~y~APE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~----------------------~ 356 (452)
+.|+|||++.+..|+.++|||||||++|||++|++||.+.+..+.+..+......++ .
T Consensus 309 ~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 388 (467)
T PTZ00284 309 RHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLR 388 (467)
T ss_pred ccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhccccc
Confidence 999999999999999999999999999999999999998877665554433111110 0
Q ss_pred CC----------------CCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 357 PD----------------DSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 357 p~----------------~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
+. ....++.+.|||.+||+ ||.+|+ ++.|+|+||||..
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~---ta~e~L~Hp~~~~ 443 (467)
T PTZ00284 389 PCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRL---NARQMTTHPYVLK 443 (467)
T ss_pred ccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCC---CHHHHhcCccccc
Confidence 00 00114567899999999 999999 9999999999985
No 110
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.7e-46 Score=373.10 Aligned_cols=257 Identities=28% Similarity=0.455 Sum_probs=209.0
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC----
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE---- 159 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~---- 159 (452)
..++|++++.||+|+||.||+|.+..+|..||+|++.+.. ........+.+|+.+++.++||||++++++|...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF-QNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccc-cchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 3578999999999999999999999999999999986542 22234456788999999999999999999986543
Q ss_pred --eEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCC
Q 012988 160 --YLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLD 237 (452)
Q Consensus 160 --~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~ 237 (452)
.+|+||||+++ +|...+. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+||+|||+++...
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~ 174 (359)
T cd07876 98 FQDVYLVMELMDA-NLCQVIH--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC 174 (359)
T ss_pred cceeEEEEeCCCc-CHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccc
Confidence 57999999965 5666653 358899999999999999999999999999999999999999999999999987532
Q ss_pred CCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccch
Q 012988 238 CSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECD 317 (452)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~D 317 (452)
.. .......||+.|+|||++.+..++.++|
T Consensus 175 ~~--------------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~D 204 (359)
T cd07876 175 TN--------------------------------------------------FMMTPYVVTRYYRAPEVILGMGYKENVD 204 (359)
T ss_pred cC--------------------------------------------------ccCCCCcccCCCCCchhccCCCCCcchh
Confidence 11 0112356899999999999999999999
Q ss_pred hhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccC--------------------ccc--------------CCC----C
Q 012988 318 WWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRN--------------------HLK--------------FPD----D 359 (452)
Q Consensus 318 iwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~--------------------~~~--------------~p~----~ 359 (452)
||||||++|+|++|+.||.+.+....+..+..... ... ++. .
T Consensus 205 iwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (359)
T cd07876 205 IWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERD 284 (359)
T ss_pred hHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccc
Confidence 99999999999999999988776554433322100 000 010 1
Q ss_pred CCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 360 SKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 360 ~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
...++++++||.+||+ ||.+|| ++.|++.||||..
T Consensus 285 ~~~~~~~~~li~~mL~~dP~~R~---t~~e~l~hp~~~~ 320 (359)
T cd07876 285 KLKTSQARDLLSKMLVIDPDKRI---SVDEALRHPYITV 320 (359)
T ss_pred cccchhHHHHHHHHhccCcccCC---CHHHHhcCchhhh
Confidence 1246789999999999 999999 9999999999974
No 111
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.8e-46 Score=359.30 Aligned_cols=269 Identities=37% Similarity=0.660 Sum_probs=222.3
Q ss_pred eccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeecCCCCh
Q 012988 94 IGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDM 173 (452)
Q Consensus 94 LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~ggsL 173 (452)
||+|+||+||+|.+..+|+.||+|++.+...........+..|+.+++.++||||+++++++...+.+|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 69999999999999999999999999876544444455667899999999999999999999999999999999999999
Q ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccccccC
Q 012988 174 MTLLMRED--TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTID 251 (452)
Q Consensus 174 ~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~ 251 (452)
.+++.... .+++..+..++.|++.||.|||++||+||||+|+|||++.++.++|+|||++.......
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~----------- 149 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK----------- 149 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC-----------
Confidence 99997755 79999999999999999999999999999999999999999999999999987542110
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhhC
Q 012988 252 DENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVG 331 (452)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~elltG 331 (452)
......|+..|+|||++.+..++.++|||||||++|+|++|
T Consensus 150 ---------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g 190 (277)
T cd05577 150 ---------------------------------------KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAG 190 (277)
T ss_pred ---------------------------------------ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhC
Confidence 01133578899999999888899999999999999999999
Q ss_pred CCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC--CHHHHhcCCCcCCCCccccc--cC
Q 012988 332 YPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG--GAHQIKAHPWFKDVVWDKLY--EM 406 (452)
Q Consensus 332 ~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~--~~~eil~hp~f~~~~~~~l~--~~ 406 (452)
+.||...........+.........+....+++.+.+||.+||. ||.+|++.. ++.+++.||||..++|..+. ..
T Consensus 191 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~~~~~~~~~ 270 (277)
T cd05577 191 RSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRRLEAGML 270 (277)
T ss_pred CCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCChhhhhcCCC
Confidence 99997765422222222211111222223578999999999998 999999642 68889999999999998885 35
Q ss_pred CCCccc
Q 012988 407 EAAFKP 412 (452)
Q Consensus 407 ~~~~~p 412 (452)
.+||.|
T Consensus 271 ~~~~~~ 276 (277)
T cd05577 271 EPPFIP 276 (277)
T ss_pred CCCCCC
Confidence 566665
No 112
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2.3e-46 Score=360.27 Aligned_cols=254 Identities=28% Similarity=0.461 Sum_probs=207.5
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh---CCCceeeEEEEEEc-----C
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV---ASHCIVKLYYSFQD-----T 158 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l---~hp~iv~l~~~~~~-----~ 158 (452)
+|++++.||+|+||+||+|.++.+|+.||+|++..... .......+.+|+.+++.+ +||||+++++++.+ .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTN-EDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcC-CCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 58999999999999999999999999999999875422 122223455677777665 79999999998864 3
Q ss_pred CeEEEEEeecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccC
Q 012988 159 EYLYLIMEYLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPL 236 (452)
Q Consensus 159 ~~~~lV~E~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~ 236 (452)
..+++||||++ ++|.+++... ..+++..++.++.|++.||.|||+.||+||||||+|||++.++.+||+|||+++..
T Consensus 80 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~ 158 (288)
T cd07863 80 TKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIY 158 (288)
T ss_pred ceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccc
Confidence 46899999996 5888888653 35899999999999999999999999999999999999999999999999998765
Q ss_pred CCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccc
Q 012988 237 DCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMEC 316 (452)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~ 316 (452)
.... ......||+.|+|||++.+..++.++
T Consensus 159 ~~~~--------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~ 188 (288)
T cd07863 159 SCQM--------------------------------------------------ALTPVVVTLWYRAPEVLLQSTYATPV 188 (288)
T ss_pred cCcc--------------------------------------------------cCCCccccccccCchHhhCCCCCCcc
Confidence 3110 01134689999999999999999999
Q ss_pred hhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccC---------cccCCC--------------CCCCChhHHHHHHHh
Q 012988 317 DWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRN---------HLKFPD--------------DSKLSPEAKDLICRL 373 (452)
Q Consensus 317 DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~---------~~~~p~--------------~~~~s~~~~dLi~~m 373 (452)
|||||||++|+|++|.+||.+......+..+..... ....+. ...++..+.+||.+|
T Consensus 189 DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 268 (288)
T cd07863 189 DMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEM 268 (288)
T ss_pred hhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHH
Confidence 999999999999999999988877766666543211 111000 124678899999999
Q ss_pred hc-CccccCCCCCHHHHhcCCCc
Q 012988 374 LC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 374 L~-dp~~R~~~~~~~eil~hp~f 395 (452)
|+ ||.+|+ ++.+++.||||
T Consensus 269 L~~dP~~R~---t~~~~l~hp~f 288 (288)
T cd07863 269 LTFNPHKRI---SAFRALQHPFF 288 (288)
T ss_pred hccCcccCC---CHHHHhcCCCC
Confidence 99 999999 99999999998
No 113
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=6.4e-47 Score=375.23 Aligned_cols=254 Identities=26% Similarity=0.382 Sum_probs=207.3
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEE
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLY 162 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~ 162 (452)
...++|+++++||+|+||+||+|.+..+++.||||++.... .......+.+|+.+++.++|+||+++++++.+.+.+|
T Consensus 71 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 148 (353)
T PLN00034 71 KSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQ 148 (353)
T ss_pred CCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEE
Confidence 34578999999999999999999999999999999986542 2233466889999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcch
Q 012988 163 LIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLY 242 (452)
Q Consensus 163 lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~ 242 (452)
+||||+.+|+|... ....+..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.+....
T Consensus 149 lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~-- 222 (353)
T PLN00034 149 VLLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM-- 222 (353)
T ss_pred EEEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceeccccc--
Confidence 99999999998643 345678888999999999999999999999999999999999999999999988653110
Q ss_pred hhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-----CCCCccch
Q 012988 243 AIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-----KGYGMECD 317 (452)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-----~~~~~~~D 317 (452)
......+||+.|+|||++.. ...+.++|
T Consensus 223 -----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~D 255 (353)
T PLN00034 223 -----------------------------------------------DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGD 255 (353)
T ss_pred -----------------------------------------------ccccccccCccccCccccccccccCcCCCcchh
Confidence 00123579999999999853 23457899
Q ss_pred hhhhhHHHHHhhhCCCCCCCCChHHH---HHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCC
Q 012988 318 WWSLGAIMYEMLVGYPPFYADDPITT---CRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHP 393 (452)
Q Consensus 318 iwSlGvil~elltG~~Pf~~~~~~~~---~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp 393 (452)
||||||++|||++|+.||........ ...+.. ...... ...++.++++||.+||. ||.+|+ ++.|+++||
T Consensus 256 vwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~l~~li~~~l~~~P~~Rp---t~~ell~hp 329 (353)
T PLN00034 256 IWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICM-SQPPEA--PATASREFRHFISCCLQREPAKRW---SAMQLLQHP 329 (353)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhc-cCCCCC--CCccCHHHHHHHHHHccCChhhCc---CHHHHhcCc
Confidence 99999999999999999974332221 111211 112222 23678999999999999 999999 999999999
Q ss_pred CcCC
Q 012988 394 WFKD 397 (452)
Q Consensus 394 ~f~~ 397 (452)
||..
T Consensus 330 ~~~~ 333 (353)
T PLN00034 330 FILR 333 (353)
T ss_pred cccc
Confidence 9986
No 114
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.7e-46 Score=373.73 Aligned_cols=257 Identities=27% Similarity=0.449 Sum_probs=211.3
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC-----
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT----- 158 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~----- 158 (452)
..++|++++.||+|+||.||+|.+..+++.||||++.+.. ........+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc-cCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 3578999999999999999999999999999999987542 2223345678899999999999999999988643
Q ss_pred -CeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCC
Q 012988 159 -EYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLD 237 (452)
Q Consensus 159 -~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~ 237 (452)
..+|+||||++ ++|...+.. .+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 101 ~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 177 (364)
T cd07875 101 FQDVYIVMELMD-ANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177 (364)
T ss_pred cCeEEEEEeCCC-CCHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccC
Confidence 35899999995 477777643 58889999999999999999999999999999999999999999999999997543
Q ss_pred CCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccch
Q 012988 238 CSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECD 317 (452)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~D 317 (452)
... ......||+.|+|||++.+..++.++|
T Consensus 178 ~~~--------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~D 207 (364)
T cd07875 178 TSF--------------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVD 207 (364)
T ss_pred CCC--------------------------------------------------cccCCcccCCcCCHHHHhCCCCCchhh
Confidence 110 112356899999999999999999999
Q ss_pred hhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCc----------------------------------ccCCC----C
Q 012988 318 WWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNH----------------------------------LKFPD----D 359 (452)
Q Consensus 318 iwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~----------------------------------~~~p~----~ 359 (452)
||||||++|+|++|+.||.+.+....+..+...... ..++. .
T Consensus 208 iwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (364)
T cd07875 208 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHN 287 (364)
T ss_pred HHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCcccccccccccc
Confidence 999999999999999999988877766665431110 00000 0
Q ss_pred CCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 360 SKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 360 ~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
...+..+++||.+||+ ||.+|| ++.++++||||..
T Consensus 288 ~~~~~~~~dll~~mL~~dP~~R~---t~~e~L~hp~~~~ 323 (364)
T cd07875 288 KLKASQARDLLSKMLVIDASKRI---SVDEALQHPYINV 323 (364)
T ss_pred ccccHHHHHHHHHhcCcCcccCC---CHHHHhcCccccc
Confidence 1135678999999999 999999 9999999999973
No 115
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-48 Score=381.37 Aligned_cols=261 Identities=29% Similarity=0.459 Sum_probs=230.4
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEE
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYL 163 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~l 163 (452)
..+.|.|+..||.|+||+||+|.++.++-.-|.|+|... .....+++.-|++||..++||+||+|++.|..++.++|
T Consensus 30 P~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk---seEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwi 106 (1187)
T KOG0579|consen 30 PRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK---SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWI 106 (1187)
T ss_pred HHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc---chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEE
Confidence 346689999999999999999999999999999998644 34557788899999999999999999999999999999
Q ss_pred EEeecCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcch
Q 012988 164 IMEYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLY 242 (452)
Q Consensus 164 V~E~~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~ 242 (452)
+.|||+||-...++.. ...+++.+++.+++|++.||.|||+++|||||||..|||++-+|.++|+|||.+.....
T Consensus 107 liEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~---- 182 (1187)
T KOG0579|consen 107 LIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS---- 182 (1187)
T ss_pred EEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchh----
Confidence 9999999999988765 57899999999999999999999999999999999999999999999999999764321
Q ss_pred hhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhcc-----CCCCCccch
Q 012988 243 AIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLL-----KKGYGMECD 317 (452)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~-----~~~~~~~~D 317 (452)
......+++|||.|||||++. ..+|++++|
T Consensus 183 ---------------------------------------------t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaD 217 (1187)
T KOG0579|consen 183 ---------------------------------------------TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKAD 217 (1187)
T ss_pred ---------------------------------------------HHhhhccccCCcccccchheeeccccCCCchhhhh
Confidence 112234789999999999975 478999999
Q ss_pred hhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcC
Q 012988 318 WWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFK 396 (452)
Q Consensus 318 iwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~ 396 (452)
|||||++|.||.-+.+|....++...+.+|... .++.+-.++..+..+.||+++||. ||..|| ++.++++||||.
T Consensus 218 iWSlGITLIEMAqiEPPHhelnpMRVllKiaKS-ePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp---~aaqll~Hpfv~ 293 (1187)
T KOG0579|consen 218 IWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS-EPPTLLQPSHWSRSFSDFLKRCLVKNPRNRP---PAAQLLKHPFVQ 293 (1187)
T ss_pred HHhhhhHHHHHhccCCCccccchHHHHHHHhhc-CCCcccCcchhhhHHHHHHHHHHhcCCccCC---CHHHHhhCcccc
Confidence 999999999999999999999999998888764 344444556889999999999998 999999 899999999999
Q ss_pred CCCc
Q 012988 397 DVVW 400 (452)
Q Consensus 397 ~~~~ 400 (452)
+++-
T Consensus 294 ~~~S 297 (1187)
T KOG0579|consen 294 NAPS 297 (1187)
T ss_pred cCCc
Confidence 8754
No 116
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2.3e-46 Score=364.36 Aligned_cols=259 Identities=27% Similarity=0.473 Sum_probs=213.9
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
.++|.+++.||+|+||+||+|.++.++..||+|++..... ......+.+|+.+++.++||||+++++++..++..|+|
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 82 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLV 82 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc--CCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEE
Confidence 4789999999999999999999999999999999875432 22234567899999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 165 MEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
|||+++ +|.+++... ..+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 83 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--- 158 (309)
T cd07872 83 FEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT--- 158 (309)
T ss_pred EeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCc---
Confidence 999964 888887654 458999999999999999999999999999999999999999999999999987542110
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchhhhhh
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDWWSLG 322 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~DiwSlG 322 (452)
.......||+.|+|||++.+ ..++.++||||||
T Consensus 159 ----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG 192 (309)
T cd07872 159 ----------------------------------------------KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVG 192 (309)
T ss_pred ----------------------------------------------cccccccccccccCCHHHhCCCCCCcHHHHHHHH
Confidence 00113468899999999875 4689999999999
Q ss_pred HHHHHhhhCCCCCCCCChHHHHHHHhhccC-----------------cccCCC---------CCCCChhHHHHHHHhhc-
Q 012988 323 AIMYEMLVGYPPFYADDPITTCRKIVHWRN-----------------HLKFPD---------DSKLSPEAKDLICRLLC- 375 (452)
Q Consensus 323 vil~elltG~~Pf~~~~~~~~~~~i~~~~~-----------------~~~~p~---------~~~~s~~~~dLi~~mL~- 375 (452)
|++|+|++|++||.+.+..+....+..... ...++. ...+++++++||.+||.
T Consensus 193 ~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 272 (309)
T cd07872 193 CIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQY 272 (309)
T ss_pred HHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccC
Confidence 999999999999988776655554432100 011111 12478899999999999
Q ss_pred CccccCCCCCHHHHhcCCCcCCC
Q 012988 376 DVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 376 dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
||.+|+ ++.|++.||||+.+
T Consensus 273 dp~~R~---t~~e~l~h~~~~~~ 292 (309)
T cd07872 273 ESKKRI---SAEEAMKHAYFRSL 292 (309)
T ss_pred ChhhCC---CHHHHhcChhhhhc
Confidence 999999 99999999999864
No 117
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=3.4e-46 Score=353.69 Aligned_cols=257 Identities=47% Similarity=0.843 Sum_probs=217.9
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHH-HHhCCCceeeEEEEEEcCCeEEEEEeecCC
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLL-AEVASHCIVKLYYSFQDTEYLYLIMEYLPG 170 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il-~~l~hp~iv~l~~~~~~~~~~~lV~E~~~g 170 (452)
+.||.|+||.||+|.+..+|+.||+|++.+...........+..|..++ ...+|+|++++++++...+.+|+||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 5799999999999999999999999998765433333333445555544 445899999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcccccc
Q 012988 171 GDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTI 250 (452)
Q Consensus 171 gsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~ 250 (452)
++|.+++.....+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||+++....
T Consensus 82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------------ 149 (260)
T cd05611 82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------------ 149 (260)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc------------
Confidence 99999998888899999999999999999999999999999999999999999999999999875321
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhh
Q 012988 251 DDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 330 (452)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ellt 330 (452)
.....|++.|+|||.+.+..++.++||||||+++|+|++
T Consensus 150 -----------------------------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~ 188 (260)
T cd05611 150 -----------------------------------------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLF 188 (260)
T ss_pred -----------------------------------------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHH
Confidence 013458889999999988889999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCCCcc
Q 012988 331 GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDVVWD 401 (452)
Q Consensus 331 G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~~~~ 401 (452)
|..||...+....+..+..............+++++.++|.+||. ||.+|++..++.|++.||||++++|+
T Consensus 189 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~~~ 260 (260)
T cd05611 189 GYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSINWD 260 (260)
T ss_pred CCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCCCC
Confidence 999999888877776665432222222223578999999999998 99999987788999999999999995
No 118
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-48 Score=349.01 Aligned_cols=253 Identities=34% Similarity=0.573 Sum_probs=218.8
Q ss_pred CCCCeeEe-ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEEc----
Q 012988 84 CVDDFELL-TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQD---- 157 (452)
Q Consensus 84 ~~~~y~i~-~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~---- 157 (452)
.+++|.+- ++||-|-.|+|..+.++.||+.+|+|++.-. ...++|+++.-.. .|||||.++++|+.
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~ 130 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENSYQG 130 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhhccC
Confidence 35788875 5799999999999999999999999987533 3466788876655 69999999998753
Q ss_pred CCeEEEEEeecCCCChHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCC---cEEEeeccC
Q 012988 158 TEYLYLIMEYLPGGDMMTLLMREDT--LTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNG---HMKLSDFGL 232 (452)
Q Consensus 158 ~~~~~lV~E~~~ggsL~~~l~~~~~--~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g---~ikl~DFGl 232 (452)
...+.+|||.|.||.|++.++.++. |+|.++..++.||..|+.|||+.+|.||||||||+|....+ .+||+|||+
T Consensus 131 rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 131 RKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred ceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccc
Confidence 5678999999999999999988764 99999999999999999999999999999999999997644 689999999
Q ss_pred CccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCC
Q 012988 233 CKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGY 312 (452)
Q Consensus 233 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 312 (452)
|+..... ....+.|-||.|.|||++....|
T Consensus 211 AK~t~~~--------------------------------------------------~~L~TPc~TPyYvaPevlg~eKy 240 (400)
T KOG0604|consen 211 AKETQEP--------------------------------------------------GDLMTPCFTPYYVAPEVLGPEKY 240 (400)
T ss_pred ccccCCC--------------------------------------------------ccccCCcccccccCHHHhCchhc
Confidence 9964311 12236688999999999999999
Q ss_pred CccchhhhhhHHHHHhhhCCCCCCCCC----hHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHH
Q 012988 313 GMECDWWSLGAIMYEMLVGYPPFYADD----PITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAH 387 (452)
Q Consensus 313 ~~~~DiwSlGvil~elltG~~Pf~~~~----~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~ 387 (452)
+...|+||+||++|-||+|.+||+... ...+-.+|..+.-.++-|+|+.+|..++|+|++||. +|.+|+ ++.
T Consensus 241 dkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRl---TI~ 317 (400)
T KOG0604|consen 241 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERL---TIE 317 (400)
T ss_pred CCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhhe---eHH
Confidence 999999999999999999999998643 445667787766666777788899999999999998 999999 999
Q ss_pred HHhcCCCcCC
Q 012988 388 QIKAHPWFKD 397 (452)
Q Consensus 388 eil~hp~f~~ 397 (452)
++++|||...
T Consensus 318 ~~m~hpwi~~ 327 (400)
T KOG0604|consen 318 EVMDHPWINQ 327 (400)
T ss_pred HhhcCchhcc
Confidence 9999999985
No 119
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=8.8e-46 Score=393.91 Aligned_cols=152 Identities=45% Similarity=0.791 Sum_probs=141.8
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
+++|+++++||+|+||+||+|.+..+++.||||++.+...........+..|+.+++.++||||+++++++....++|||
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 57899999999999999999999999999999999876555555567788999999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccC
Q 012988 165 MEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPL 236 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~ 236 (452)
|||+.|++|.+++...+.+++..++.++.||+.||.|||.+|||||||||+||||+.+|++||+|||+++..
T Consensus 83 mEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~ 154 (669)
T cd05610 83 MEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVT 154 (669)
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCccc
Confidence 999999999999988888999999999999999999999999999999999999999999999999999854
No 120
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=7.8e-46 Score=351.51 Aligned_cols=259 Identities=32% Similarity=0.539 Sum_probs=222.7
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhc--ccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMV--KRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYL 163 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~l 163 (452)
++|++.+.||+|++|.||.|.+..++..||+|++...... .......+.+|+.+++.++||||+++++++.+...+|+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 5799999999999999999999999999999998754322 12234678889999999999999999999999999999
Q ss_pred EEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 164 IMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 164 V~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
||||+++++|.+++...+.+++..++.++.|++.||.|||+.||+||||+|+||+++.++.++|+|||+++.+......
T Consensus 82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~- 160 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSS- 160 (263)
T ss_pred EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccccccc-
Confidence 9999999999999988888999999999999999999999999999999999999999999999999998754311000
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhH
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 323 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGv 323 (452)
........|+..|+|||++.+..++.++||||||+
T Consensus 161 ---------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 195 (263)
T cd06625 161 ---------------------------------------------GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGC 195 (263)
T ss_pred ---------------------------------------------cccccCCCcCccccCcceeccCCCCchhhhHHHHH
Confidence 00001345888999999999988999999999999
Q ss_pred HHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 324 IMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 324 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
++|+|++|+.||...+.......+........+|. .++..+.+||.+||. +|.+|| ++.++++||||
T Consensus 196 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~Rp---t~~~ll~~~~~ 263 (263)
T cd06625 196 TVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPS--HVSPDARNFLRRTFVENAKKRP---SAEELLRHFFV 263 (263)
T ss_pred HHHHHHhCCCCccccchHHHHHHHhccCCCCCCCc--cCCHHHHHHHHHHhhcCcccCC---CHHHHhhCCCC
Confidence 99999999999988777666666655444444443 688999999999999 999999 99999999998
No 121
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=4.7e-46 Score=353.13 Aligned_cols=257 Identities=45% Similarity=0.840 Sum_probs=223.8
Q ss_pred eccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeecCCCCh
Q 012988 94 IGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDM 173 (452)
Q Consensus 94 LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~ggsL 173 (452)
||.|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++.++..+|+||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 69999999999999999999999999876554445567789999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccccccCcc
Q 012988 174 MTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDE 253 (452)
Q Consensus 174 ~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~ 253 (452)
.+++.+...+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~------------- 147 (262)
T cd05572 81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ------------- 147 (262)
T ss_pred HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-------------
Confidence 9999888889999999999999999999999999999999999999999999999999988653210
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhhCCC
Q 012988 254 NMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 333 (452)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~elltG~~ 333 (452)
......|++.|+|||.+.+..++.++|+||||+++|+|++|..
T Consensus 148 -------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~ 190 (262)
T cd05572 148 -------------------------------------KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRP 190 (262)
T ss_pred -------------------------------------ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCC
Confidence 0113468899999999988889999999999999999999999
Q ss_pred CCCCCC--hHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCC--CCHHHHhcCCCcCCCCccc
Q 012988 334 PFYADD--PITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGT--GGAHQIKAHPWFKDVVWDK 402 (452)
Q Consensus 334 Pf~~~~--~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~--~~~~eil~hp~f~~~~~~~ 402 (452)
||.... .......+........+|. .+++++.++|.+||. ||.+|++. .++.|+++||||++.+|+.
T Consensus 191 p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~ 262 (262)
T cd05572 191 PFGEDDEDPMEIYNDILKGNGKLEFPN--YIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDWEG 262 (262)
T ss_pred CcCCCCCCHHHHHHHHhccCCCCCCCc--ccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCCCC
Confidence 998776 6666666664344555554 458999999999998 99999941 1399999999999999963
No 122
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=4.8e-46 Score=383.36 Aligned_cols=262 Identities=29% Similarity=0.462 Sum_probs=222.0
Q ss_pred CCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC--
Q 012988 82 KICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE-- 159 (452)
Q Consensus 82 ~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~-- 159 (452)
....++|++.+.||+|+||+||+|++..+|+.||||++..... .......+.+|+.++..++|+||++++..+....
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~ 106 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPR 106 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHhcCCCCcEEEeecceeccccc
Confidence 3445799999999999999999999999999999999876543 2334566788999999999999999988775432
Q ss_pred ------eEEEEEeecCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEee
Q 012988 160 ------YLYLIMEYLPGGDMMTLLMR----EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSD 229 (452)
Q Consensus 160 ------~~~lV~E~~~ggsL~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~D 229 (452)
.+++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.||+||||||+|||++.++.+||+|
T Consensus 107 ~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~D 186 (496)
T PTZ00283 107 NPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGD 186 (496)
T ss_pred CcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEe
Confidence 47899999999999999864 24689999999999999999999999999999999999999999999999
Q ss_pred ccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC
Q 012988 230 FGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK 309 (452)
Q Consensus 230 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~ 309 (452)
||+++.+..... .......+||+.|+|||++.+
T Consensus 187 FGls~~~~~~~~-----------------------------------------------~~~~~~~~Gt~~Y~aPE~~~~ 219 (496)
T PTZ00283 187 FGFSKMYAATVS-----------------------------------------------DDVGRTFCGTPYYVAPEIWRR 219 (496)
T ss_pred cccCeecccccc-----------------------------------------------ccccccccCCcceeCHHHhCC
Confidence 999986531100 001124579999999999999
Q ss_pred CCCCccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHH
Q 012988 310 KGYGMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQ 388 (452)
Q Consensus 310 ~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~e 388 (452)
..++.++|||||||++|+|++|+.||.+.+....+..+..... ..+| ..+++++.+||.+||. ||.+|| ++.+
T Consensus 220 ~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~-~~~~--~~~~~~l~~li~~~L~~dP~~RP---s~~e 293 (496)
T PTZ00283 220 KPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRY-DPLP--PSISPEMQEIVTALLSSDPKRRP---SSSK 293 (496)
T ss_pred CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCC-CCCC--CCCCHHHHHHHHHHcccChhhCc---CHHH
Confidence 9999999999999999999999999998888777777665322 1233 4689999999999999 999999 9999
Q ss_pred HhcCCCcCC
Q 012988 389 IKAHPWFKD 397 (452)
Q Consensus 389 il~hp~f~~ 397 (452)
++.|||++.
T Consensus 294 ll~~p~~~~ 302 (496)
T PTZ00283 294 LLNMPICKL 302 (496)
T ss_pred HHhCHHHHH
Confidence 999999875
No 123
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=5.9e-46 Score=382.12 Aligned_cols=257 Identities=30% Similarity=0.435 Sum_probs=220.0
Q ss_pred CCeeEeceeccCCCeEEEEEEEccC-CCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKS-GNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
..|.+.+.||+|+||.||+|....+ +..||+|.+.... ......+.+|+.+|+.++|||||+++++|...+.+|+|
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~---~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv 143 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND---ERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLI 143 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC---HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEE
Confidence 4599999999999999999998877 7889999764432 23345678899999999999999999999999999999
Q ss_pred EeecCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCc
Q 012988 165 MEYLPGGDMMTLLMR----EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCST 240 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~ 240 (452)
|||++||+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.+....
T Consensus 144 ~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~ 223 (478)
T PTZ00267 144 MEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV 223 (478)
T ss_pred EECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence 999999999988753 3568999999999999999999999999999999999999999999999999998653211
Q ss_pred chhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhh
Q 012988 241 LYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWS 320 (452)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwS 320 (452)
. .......+||+.|+|||++.+..++.++||||
T Consensus 224 ~-----------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s 256 (478)
T PTZ00267 224 S-----------------------------------------------LDVASSFCGTPYYLAPELWERKRYSKKADMWS 256 (478)
T ss_pred c-----------------------------------------------cccccccCCCccccCHhHhCCCCCCcHHhHHH
Confidence 0 01122467999999999999999999999999
Q ss_pred hhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCC
Q 012988 321 LGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 321 lGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
|||++|+|++|+.||.+.+..+.+..+.... ...+| ..+++++.+||.+||. ||..|| ++.+++.|||++.+
T Consensus 257 lG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~-~~~~~--~~~s~~~~~li~~~L~~dP~~Rp---s~~~~l~~~~~~~~ 329 (478)
T PTZ00267 257 LGVILYELLTLHRPFKGPSQREIMQQVLYGK-YDPFP--CPVSSGMKALLDPLLSKNPALRP---TTQQLLHTEFLKYV 329 (478)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-CCCCC--ccCCHHHHHHHHHHhccChhhCc---CHHHHHhCHHHHHH
Confidence 9999999999999999888877777776532 12233 3688999999999999 999999 99999999998743
No 124
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=8e-46 Score=355.38 Aligned_cols=258 Identities=36% Similarity=0.672 Sum_probs=209.0
Q ss_pred eeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHH---hCCCceeeEEEEEEcCCeEEEEEeecC
Q 012988 93 IIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAE---VASHCIVKLYYSFQDTEYLYLIMEYLP 169 (452)
Q Consensus 93 ~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~---l~hp~iv~l~~~~~~~~~~~lV~E~~~ 169 (452)
.||+|+||.||+|.+..++..||+|++.+.............+|..+++. .+||+|+.+++++...+.+|+||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 48999999999999999999999999976543333222333445444443 479999999999999999999999999
Q ss_pred CCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccccc
Q 012988 170 GGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKT 249 (452)
Q Consensus 170 ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~ 249 (452)
+|+|..++...+.+++..+..++.|++.||.|||+.||+||||||+|||++.++.++|+|||++.......
T Consensus 81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~--------- 151 (279)
T cd05633 81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--------- 151 (279)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC---------
Confidence 99999999888889999999999999999999999999999999999999999999999999987542110
Q ss_pred cCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhcc-CCCCCccchhhhhhHHHHHh
Q 012988 250 IDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEM 328 (452)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~-~~~~~~~~DiwSlGvil~el 328 (452)
.....||+.|+|||++. +..++.++|||||||++|+|
T Consensus 152 ------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l 189 (279)
T cd05633 152 ------------------------------------------PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKL 189 (279)
T ss_pred ------------------------------------------ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHH
Confidence 01235899999999986 45689999999999999999
Q ss_pred hhCCCCCCCCChH--HHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC--CHHHHhcCCCcCCCCcccc
Q 012988 329 LVGYPPFYADDPI--TTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG--GAHQIKAHPWFKDVVWDKL 403 (452)
Q Consensus 329 ltG~~Pf~~~~~~--~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~--~~~eil~hp~f~~~~~~~l 403 (452)
++|..||...... ....... ......+| ..+++++++||.+||. ||.+|++.. ++.++++||||++++|...
T Consensus 190 ~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~~~~ 266 (279)
T cd05633 190 LRGHSPFRQHKTKDKHEIDRMT-LTVNVELP--DSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQQV 266 (279)
T ss_pred HhCCCCcCCCCCcCHHHHHHHh-hcCCcCCc--cccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCCHhHH
Confidence 9999999754321 1222111 11222333 3588999999999999 999999532 6999999999999999887
Q ss_pred c
Q 012988 404 Y 404 (452)
Q Consensus 404 ~ 404 (452)
.
T Consensus 267 ~ 267 (279)
T cd05633 267 Y 267 (279)
T ss_pred h
Confidence 4
No 125
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=7e-46 Score=368.10 Aligned_cols=257 Identities=28% Similarity=0.443 Sum_probs=209.2
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC-----
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT----- 158 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~----- 158 (452)
..++|++++.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.+++.++||||++++++|...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCccc-ChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 35789999999999999999999999999999999865422 223345677899999999999999999998654
Q ss_pred -CeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCC
Q 012988 159 -EYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLD 237 (452)
Q Consensus 159 -~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~ 237 (452)
..+|+||||+++ +|...+. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+||+|||+++...
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~ 170 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHh--hcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCC
Confidence 357999999965 6766664 358899999999999999999999999999999999999999999999999987543
Q ss_pred CCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccch
Q 012988 238 CSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECD 317 (452)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~D 317 (452)
... ......||+.|+|||++.+..++.++|
T Consensus 171 ~~~--------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~D 200 (355)
T cd07874 171 TSF--------------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVD 200 (355)
T ss_pred Ccc--------------------------------------------------ccCCccccCCccCHHHHcCCCCCchhh
Confidence 110 112356899999999999999999999
Q ss_pred hhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCc-------------------------ccCC-------------CC
Q 012988 318 WWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNH-------------------------LKFP-------------DD 359 (452)
Q Consensus 318 iwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~-------------------------~~~p-------------~~ 359 (452)
||||||++|+|++|+.||.+.+....+..+...... ..++ ..
T Consensus 201 iwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (355)
T cd07874 201 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHN 280 (355)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccc
Confidence 999999999999999999887765554433221000 0000 01
Q ss_pred CCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 360 SKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 360 ~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
...+.++++||.+||. ||.+|| ++.|+++||||..
T Consensus 281 ~~~~~~~~~li~~mL~~dP~~Rp---s~~ell~hp~~~~ 316 (355)
T cd07874 281 KLKASQARDLLSKMLVIDPAKRI---SVDEALQHPYINV 316 (355)
T ss_pred cccchHHHHHHHHHhcCCchhcC---CHHHHhcCcchhc
Confidence 1245778999999999 999999 9999999999973
No 126
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.7e-46 Score=373.43 Aligned_cols=262 Identities=24% Similarity=0.380 Sum_probs=214.4
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEc--cCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeE
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREK--KSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYL 161 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~ 161 (452)
...+|++++.||.|+||.||+|... .++..||+|.+.... ...+|+.+++.++||||++++++|.....+
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~--------~~~~E~~il~~l~h~~iv~~~~~~~~~~~~ 161 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK--------TPGREIDILKTISHRAIINLIHAYRWKSTV 161 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc--------cHHHHHHHHHhcCCCCccceeeeEeeCCEE
Confidence 3457999999999999999999764 356789999876431 245799999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 162 YLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
|+|||++ +++|..++.....+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||+++.+.....
T Consensus 162 ~lv~e~~-~~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~ 240 (392)
T PHA03207 162 CMVMPKY-KCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD 240 (392)
T ss_pred EEEehhc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccc
Confidence 9999999 578999987778899999999999999999999999999999999999999999999999999876532110
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSL 321 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSl 321 (452)
.......+||+.|+|||++.+..|+.++|||||
T Consensus 241 -----------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvwsl 273 (392)
T PHA03207 241 -----------------------------------------------TPQCYGWSGTLETNSPELLALDPYCAKTDIWSA 273 (392)
T ss_pred -----------------------------------------------cccccccccccCccCHhHhcCCCCCchhhHHHH
Confidence 001124579999999999999999999999999
Q ss_pred hHHHHHhhhCCCCCCCCCh---HHHHHHHhhccC--cccC-------------------------CC---CCCCChhHHH
Q 012988 322 GAIMYEMLVGYPPFYADDP---ITTCRKIVHWRN--HLKF-------------------------PD---DSKLSPEAKD 368 (452)
Q Consensus 322 Gvil~elltG~~Pf~~~~~---~~~~~~i~~~~~--~~~~-------------------------p~---~~~~s~~~~d 368 (452)
||++|+|++|+.||.+... ...+..+..... ...+ |. ...++.++++
T Consensus 274 Gvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (392)
T PHA03207 274 GLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEY 353 (392)
T ss_pred HHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHH
Confidence 9999999999999976542 222222221100 0011 10 1235678999
Q ss_pred HHHHhhc-CccccCCCCCHHHHhcCCCcCCCCccccc
Q 012988 369 LICRLLC-DVEHRLGTGGAHQIKAHPWFKDVVWDKLY 404 (452)
Q Consensus 369 Li~~mL~-dp~~R~~~~~~~eil~hp~f~~~~~~~l~ 404 (452)
||.+||. ||.+|| ++.+++.||||....|+.+.
T Consensus 354 li~~ml~~dp~~Rp---sa~e~l~~p~f~~~~~~~~~ 387 (392)
T PHA03207 354 LIAKMLTFDQEFRP---SAQDILSLPLFTKEPINLLN 387 (392)
T ss_pred HHHHHhccChhhCC---CHHHHhhCchhhccchhhhc
Confidence 9999999 999999 99999999999998888774
No 127
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=3.7e-46 Score=352.76 Aligned_cols=255 Identities=37% Similarity=0.613 Sum_probs=213.4
Q ss_pred eeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEee
Q 012988 88 FELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEY 167 (452)
Q Consensus 88 y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~ 167 (452)
|++++.||+|+||+||+|.+..+++.||+|++......... .....+|+.+++.++||||+++++++.+...+++||||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEE-REENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHH-HHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccc-cchhhhhhhccccccccccccccccccccccccccccc
Confidence 88999999999999999999999999999999876543332 22345599999999999999999999999999999999
Q ss_pred cCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccc
Q 012988 168 LPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEH 247 (452)
Q Consensus 168 ~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~ 247 (452)
+++++|.+++.....+++..+..++.|++.||.+||++||+|+||||+|||++.++.++|+|||.+......
T Consensus 80 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~-------- 151 (260)
T PF00069_consen 80 CPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSEN-------- 151 (260)
T ss_dssp ETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTST--------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--------
Confidence 999999999988889999999999999999999999999999999999999999999999999998753100
Q ss_pred cccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhcc-CCCCCccchhhhhhHHHH
Q 012988 248 KTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMY 326 (452)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~-~~~~~~~~DiwSlGvil~ 326 (452)
........||+.|+|||++. +..++.++||||||+++|
T Consensus 152 -----------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~ 190 (260)
T PF00069_consen 152 -----------------------------------------NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILY 190 (260)
T ss_dssp -----------------------------------------TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHH
T ss_pred -----------------------------------------ccccccccccccccccccccccccccccccccccccccc
Confidence 01122457899999999998 788899999999999999
Q ss_pred HhhhCCCCCCCCC---hHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 327 EMLVGYPPFYADD---PITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 327 elltG~~Pf~~~~---~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
+|++|..||.... .......................+..+.+||.+||. ||.+|| ++.++++||||
T Consensus 191 ~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~---~~~~l~~~~~~ 260 (260)
T PF00069_consen 191 ELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRP---SAEELLKHPWF 260 (260)
T ss_dssp HHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGST---THHHHHTSGGG
T ss_pred cccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCc---CHHHHhcCCCC
Confidence 9999999998873 333333333211111111111234899999999999 999999 99999999998
No 128
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=7e-46 Score=365.58 Aligned_cols=257 Identities=23% Similarity=0.342 Sum_probs=206.2
Q ss_pred CCCCCCCeeEeceeccCCCeEEEEEEEc-----cCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEE
Q 012988 81 HKICVDDFELLTIIGRGAFGEVRLCREK-----KSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYS 154 (452)
Q Consensus 81 ~~~~~~~y~i~~~LG~G~~g~V~~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~ 154 (452)
+.+..++|++.+.||+|+||.||+|.+. .++..||+|++.... .......+.+|+.++..+ +||||++++++
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~ 79 (338)
T cd05102 2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGA 79 (338)
T ss_pred cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeE
Confidence 3566789999999999999999999753 345789999986432 223345688999999999 89999999998
Q ss_pred EEcC-CeEEEEEeecCCCChHHHHHhc-----------------------------------------------------
Q 012988 155 FQDT-EYLYLIMEYLPGGDMMTLLMRE----------------------------------------------------- 180 (452)
Q Consensus 155 ~~~~-~~~~lV~E~~~ggsL~~~l~~~----------------------------------------------------- 180 (452)
+... +.+++||||+++|+|.+++...
T Consensus 80 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (338)
T cd05102 80 CTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNP 159 (338)
T ss_pred ecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCccccc
Confidence 8764 4689999999999999998642
Q ss_pred ---------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccccccC
Q 012988 181 ---------DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTID 251 (452)
Q Consensus 181 ---------~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~ 251 (452)
..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++........
T Consensus 160 ~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~--------- 230 (338)
T cd05102 160 PQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY--------- 230 (338)
T ss_pred chhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcch---------
Confidence 23677888899999999999999999999999999999999999999999999864211000
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhh-
Q 012988 252 DENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV- 330 (452)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ellt- 330 (452)
.......+|+.|+|||++.+..++.++|||||||++|||++
T Consensus 231 --------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~ 272 (338)
T cd05102 231 --------------------------------------VRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSL 272 (338)
T ss_pred --------------------------------------hcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhC
Confidence 00112346788999999999999999999999999999997
Q ss_pred CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 331 GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 331 G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
|..||.+......+............| ..+++++.+||.+||. ||.+|| ++.++++
T Consensus 273 g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dp~~RP---s~~el~~ 329 (338)
T cd05102 273 GASPYPGVQINEEFCQRLKDGTRMRAP--ENATPEIYRIMLACWQGDPKERP---TFSALVE 329 (338)
T ss_pred CCCCCCCCCccHHHHHHHhcCCCCCCC--CCCCHHHHHHHHHHccCChhhCc---CHHHHHH
Confidence 999998765444443333322233333 3678999999999999 999999 8888874
No 129
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2e-45 Score=356.33 Aligned_cols=260 Identities=27% Similarity=0.478 Sum_probs=214.7
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
.++|++++.||.|+||.||+|.++.+++.||+|.+..... ......+.+|+.+++.++||||+++++++.+.+.+|+|
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 82 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV 82 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc--cCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEE
Confidence 5789999999999999999999999999999999865432 22334567899999999999999999999999999999
Q ss_pred EeecCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 165 MEYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
|||++ ++|..++.. ...+++..++.++.|++.||.|||++||+||||||+|||++.++.++|+|||++.......
T Consensus 83 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~--- 158 (301)
T cd07873 83 FEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT--- 158 (301)
T ss_pred Eeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC---
Confidence 99996 588888865 3578999999999999999999999999999999999999999999999999987542110
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchhhhhh
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDWWSLG 322 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~DiwSlG 322 (452)
.......+++.|+|||++.+ ..++.++||||||
T Consensus 159 ----------------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG 192 (301)
T cd07873 159 ----------------------------------------------KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVG 192 (301)
T ss_pred ----------------------------------------------CcccccceeecccCcHHHhCCCCCccHHHHHHHH
Confidence 00112357889999999876 4578899999999
Q ss_pred HHHHHhhhCCCCCCCCChHHHHHHHhhccC-----------------cccCCC---------CCCCChhHHHHHHHhhc-
Q 012988 323 AIMYEMLVGYPPFYADDPITTCRKIVHWRN-----------------HLKFPD---------DSKLSPEAKDLICRLLC- 375 (452)
Q Consensus 323 vil~elltG~~Pf~~~~~~~~~~~i~~~~~-----------------~~~~p~---------~~~~s~~~~dLi~~mL~- 375 (452)
|++|+|++|++||.+.+..+....+..... ...+|. ...+++.+++||.+||+
T Consensus 193 ~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~ 272 (301)
T cd07873 193 CIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQF 272 (301)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcC
Confidence 999999999999988776655544432111 011111 12578899999999999
Q ss_pred CccccCCCCCHHHHhcCCCcCCCC
Q 012988 376 DVEHRLGTGGAHQIKAHPWFKDVV 399 (452)
Q Consensus 376 dp~~R~~~~~~~eil~hp~f~~~~ 399 (452)
||.+|+ ++.++++||||+.+-
T Consensus 273 dp~~R~---t~~eil~h~~f~~~~ 293 (301)
T cd07873 273 EGRKRI---SAEEAMKHPYFHCLG 293 (301)
T ss_pred CcccCc---CHHHHhcCccccccc
Confidence 999999 999999999998654
No 130
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=3.4e-45 Score=350.82 Aligned_cols=258 Identities=36% Similarity=0.672 Sum_probs=211.2
Q ss_pred eeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHH---HHHHhCCCceeeEEEEEEcCCeEEEEEeecC
Q 012988 93 IIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERN---LLAEVASHCIVKLYYSFQDTEYLYLIMEYLP 169 (452)
Q Consensus 93 ~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~---il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~ 169 (452)
.||+|+||.||+|.+..+++.||+|++.+..............|.. +++...||+|+++++++.+.+.+|+||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999999999999999987654332222222333433 3444579999999999999999999999999
Q ss_pred CCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccccc
Q 012988 170 GGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKT 249 (452)
Q Consensus 170 ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~ 249 (452)
||+|..++...+.+++..++.++.|++.||.|||+.||+||||||+|||++.++.++|+|||++..+...
T Consensus 81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~---------- 150 (278)
T cd05606 81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---------- 150 (278)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc----------
Confidence 9999999988888999999999999999999999999999999999999999999999999998754211
Q ss_pred cCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchhhhhhHHHHHh
Q 012988 250 IDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEM 328 (452)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~DiwSlGvil~el 328 (452)
......||..|+|||++.+ ..++.++||||+||++|+|
T Consensus 151 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l 189 (278)
T cd05606 151 -----------------------------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKL 189 (278)
T ss_pred -----------------------------------------CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHH
Confidence 0113468999999999975 4689999999999999999
Q ss_pred hhCCCCCCCCC---hHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC--CHHHHhcCCCcCCCCccc
Q 012988 329 LVGYPPFYADD---PITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG--GAHQIKAHPWFKDVVWDK 402 (452)
Q Consensus 329 ltG~~Pf~~~~---~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~--~~~eil~hp~f~~~~~~~ 402 (452)
++|..||.... .......+.. ....+|. .++.++.+||.+||. +|.+|+... ++.++++||||++++|..
T Consensus 190 ~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~--~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~~~ 265 (278)
T cd05606 190 LRGHSPFRQHKTKDKHEIDRMTLT--MAVELPD--SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQM 265 (278)
T ss_pred HhCCCCCCCCCccchHHHHHHhhc--cCCCCCC--cCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCCchH
Confidence 99999998663 2222222221 2333443 578999999999998 999999765 899999999999999988
Q ss_pred ccc
Q 012988 403 LYE 405 (452)
Q Consensus 403 l~~ 405 (452)
...
T Consensus 266 ~~~ 268 (278)
T cd05606 266 VFL 268 (278)
T ss_pred hhh
Confidence 853
No 131
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.6e-46 Score=370.13 Aligned_cols=259 Identities=30% Similarity=0.551 Sum_probs=232.5
Q ss_pred CCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeE
Q 012988 82 KICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYL 161 (452)
Q Consensus 82 ~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~ 161 (452)
......|.+++.||+|.|++|.+|.+..++..||||++.+...... ..+.+.+|+.+|+.++|||||+++.+......+
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~-~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~l 130 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPS-KRQKLGREVDIMKSLNHPNIVKLFSVIETEATL 130 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChH-HHHHHHHHHHHHHhcCCcceeeeeeeeeeccee
Confidence 4456789999999999999999999999999999999988765433 345588999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 162 YLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
|+||||+.+|.+++++.+++.+.+..++.++.|+++|++|||+++|||||||++||||+.+-++||+|||++..+..+.
T Consensus 131 ylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~- 209 (596)
T KOG0586|consen 131 YLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGL- 209 (596)
T ss_pred EEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeecccc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998775221
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCC-Cccchhhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGY-GMECDWWS 320 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~-~~~~DiwS 320 (452)
...+.||++.|.|||++.+..| +..+|+||
T Consensus 210 -------------------------------------------------~lqt~cgsppyAaPEl~~g~~y~gpe~D~Ws 240 (596)
T KOG0586|consen 210 -------------------------------------------------MLQTFCGSPPYAAPELFNGKKYDGPEVDIWS 240 (596)
T ss_pred -------------------------------------------------cccccCCCCCccChHhhcCcccCCcceehhh
Confidence 2236799999999999999888 78999999
Q ss_pred hhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCC
Q 012988 321 LGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 321 lGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
+|++||.|+.|.+||.+.+-.+.-...+..+. .+|. .++-++++||++||. +|.+|. ++++|++|.|.+..
T Consensus 241 lgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~--rIp~--~ms~dce~lLrk~lvl~Pskr~---~~dqim~~~W~n~~ 312 (596)
T KOG0586|consen 241 LGVVLYALVEGSLPFDGQNLKELRPRVLRGKY--RIPF--YMSCDCEDLLRKFLVLNPSKRG---PCDQIMKDRWRNDL 312 (596)
T ss_pred hhhhheeeeecccccCCcccccccchheeeee--cccc--eeechhHHHHHHhhccCccccC---CHHHhhhhcccchh
Confidence 99999999999999999888777777766444 3443 578999999999998 999999 99999999999753
No 132
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-46 Score=372.18 Aligned_cols=249 Identities=31% Similarity=0.563 Sum_probs=217.8
Q ss_pred eeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeecCCCC
Q 012988 93 IIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGD 172 (452)
Q Consensus 93 ~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~ggs 172 (452)
+||+|+||+||.|++..|....|||.+.... ....+-+..|+.+.+.++|.|||++++++..++++-|.||-++||+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekd---sr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKD---SREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS 658 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeeccccc---chhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence 7999999999999999999999999986542 3445678899999999999999999999999999999999999999
Q ss_pred hHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECC-CCcEEEeeccCCccCCCCcchhhcccc
Q 012988 173 MMTLLMRE-DTL--TENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDK-NGHMKLSDFGLCKPLDCSTLYAIHEHK 248 (452)
Q Consensus 173 L~~~l~~~-~~~--~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~-~g~ikl~DFGla~~~~~~~~~~~~~~~ 248 (452)
|.++|... +++ .|..+.+|..||+.||.|||++.|||||||.+||||+. .|.+||+|||-++.+..
T Consensus 659 LSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg---------- 728 (1226)
T KOG4279|consen 659 LSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG---------- 728 (1226)
T ss_pred HHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhcc----------
Confidence 99999775 667 78899999999999999999999999999999999974 78999999999997631
Q ss_pred ccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC--CCCCccchhhhhhHHHH
Q 012988 249 TIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK--KGYGMECDWWSLGAIMY 326 (452)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~--~~~~~~~DiwSlGvil~ 326 (452)
. ...+.++.||..|||||++-. .+|+.++|||||||++.
T Consensus 729 ---------------i------------------------nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~v 769 (1226)
T KOG4279|consen 729 ---------------I------------------------NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMV 769 (1226)
T ss_pred ---------------C------------------------CccccccccchhhhChHhhccCCcCCCchhhhhhccceeE
Confidence 0 122447889999999999975 46899999999999999
Q ss_pred HhhhCCCCCCCC-ChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCC
Q 012988 327 EMLVGYPPFYAD-DPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 327 elltG~~Pf~~~-~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
||.||++||... ++.....++--.+.++++|. .+|.+++.||.+|.. ||.+|| +|.++|.+||++.-
T Consensus 770 EMATGrPPF~ElgspqAAMFkVGmyKvHP~iPe--elsaeak~FilrcFepd~~~R~---sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 770 EMATGRPPFVELGSPQAAMFKVGMYKVHPPIPE--ELSAEAKNFILRCFEPDPCDRP---SAKDLLQDPFLQHN 838 (1226)
T ss_pred eeccCCCCeeecCChhHhhhhhcceecCCCCcH--HHHHHHHHHHHHHcCCCcccCc---cHHHhccCcccccC
Confidence 999999999753 44455555555566777776 799999999999999 999999 99999999999854
No 133
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=5.6e-46 Score=367.05 Aligned_cols=256 Identities=28% Similarity=0.473 Sum_probs=211.1
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC------
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT------ 158 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~------ 158 (452)
.++|++++.||.|+||+||+|.+..++..||+|++.+... .......+.+|+.+++.++||||++++++|...
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ-SLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhh-hhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 4789999999999999999999999999999999875422 222345677899999999999999999988643
Q ss_pred CeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCC
Q 012988 159 EYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDC 238 (452)
Q Consensus 159 ~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~ 238 (452)
..+|++|+++ +++|..++. ...+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~ 170 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVK-CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADD 170 (343)
T ss_pred CcEEEEeecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCC
Confidence 3579999998 889988774 46799999999999999999999999999999999999999999999999999875431
Q ss_pred CcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccch
Q 012988 239 STLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECD 317 (452)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~D 317 (452)
. ....+||+.|+|||++.+ ..++.++|
T Consensus 171 ~----------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~D 198 (343)
T cd07878 171 E----------------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVD 198 (343)
T ss_pred C----------------------------------------------------cCCccccccccCchHhcCCccCCchhh
Confidence 1 123568999999999977 56899999
Q ss_pred hhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcc---------------------cCCC------CCCCChhHHHHH
Q 012988 318 WWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHL---------------------KFPD------DSKLSPEAKDLI 370 (452)
Q Consensus 318 iwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~---------------------~~p~------~~~~s~~~~dLi 370 (452)
||||||++|+|++|+.||.+.+....+..+....... ..+. ....++.+.+||
T Consensus 199 iwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 278 (343)
T cd07878 199 IWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLL 278 (343)
T ss_pred hHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHH
Confidence 9999999999999999998877665555443311100 0110 123567789999
Q ss_pred HHhhc-CccccCCCCCHHHHhcCCCcCCC
Q 012988 371 CRLLC-DVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 371 ~~mL~-dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
.+||. ||.+|+ ++.+++.||||...
T Consensus 279 ~~mL~~dp~~R~---s~~ell~hp~~~~~ 304 (343)
T cd07878 279 EKMLVLDSDKRI---SASEALAHPYFSQY 304 (343)
T ss_pred HHHcCCChhhCC---CHHHHhcCcchhcc
Confidence 99999 999999 99999999999864
No 134
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-47 Score=365.30 Aligned_cols=257 Identities=35% Similarity=0.629 Sum_probs=223.4
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeecCCC
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGG 171 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~gg 171 (452)
++||+|-||+||-|.++.+|+.||||++.|-.+.... ...+++|+.||+.+.||.||.+...|++.+.+|+|||.+ .|
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kq-esqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~G 647 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQ-ESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-HG 647 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCch-HHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-cc
Confidence 6899999999999999999999999999987665443 477899999999999999999999999999999999999 66
Q ss_pred ChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCC---cEEEeeccCCccCCCCcchhhcc
Q 012988 172 DMMTLLMR--EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNG---HMKLSDFGLCKPLDCSTLYAIHE 246 (452)
Q Consensus 172 sL~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g---~ikl~DFGla~~~~~~~~~~~~~ 246 (452)
++..++.. .+++++...++++.||+.||.|||-++|+|.||||||||+.+.. .+||||||+|+.++...
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks------ 721 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS------ 721 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhh------
Confidence 77777644 57999999999999999999999999999999999999998654 69999999999875332
Q ss_pred ccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHH
Q 012988 247 HKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 326 (452)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ 326 (452)
...+.+|||.|+|||++.+++|+...|+||+|||+|
T Consensus 722 --------------------------------------------FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiY 757 (888)
T KOG4236|consen 722 --------------------------------------------FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIY 757 (888)
T ss_pred --------------------------------------------hhhhhcCCccccCHHHHhhccccccccceeeeEEEE
Confidence 123679999999999999999999999999999999
Q ss_pred HhhhCCCCCCCCChHHHHHHHhhccCcccCCC--CCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCCC-ccc
Q 012988 327 EMLVGYPPFYADDPITTCRKIVHWRNHLKFPD--DSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDVV-WDK 402 (452)
Q Consensus 327 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~--~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~~-~~~ 402 (452)
--|.|..||..+.+ +-.+|.+ ..+.+|. |..+++++.|||..||+ .-.+|. +++..+.|||+++.. |-+
T Consensus 758 VsLSGTFPFNEdEd--IndQIQN--AaFMyPp~PW~eis~~AidlIn~LLqVkm~kRy---svdk~lsh~Wlq~yq~w~D 830 (888)
T KOG4236|consen 758 VSLSGTFPFNEDED--INDQIQN--AAFMYPPNPWSEISPEAIDLINNLLQVKMRKRY---SVDKSLSHPWLQDYQTWLD 830 (888)
T ss_pred EEecccccCCCccc--hhHHhhc--cccccCCCchhhcCHHHHHHHHHHHHHHHHHhc---chHhhccchhhhcchHHHH
Confidence 99999999975543 3445554 3344443 46799999999999999 999999 999999999999864 888
Q ss_pred cccCC
Q 012988 403 LYEME 407 (452)
Q Consensus 403 l~~~~ 407 (452)
|++++
T Consensus 831 LRelE 835 (888)
T KOG4236|consen 831 LRELE 835 (888)
T ss_pred HHHHH
Confidence 86543
No 135
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=4.7e-45 Score=352.17 Aligned_cols=265 Identities=30% Similarity=0.461 Sum_probs=223.4
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEE
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYL 163 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~l 163 (452)
..+.|+++++||.|+||.||+|++..++..||+|++.... ......+.+|+.+++.++||||+++++++..++.+|+
T Consensus 10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (292)
T cd06644 10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWI 86 (292)
T ss_pred cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEE
Confidence 3467999999999999999999999999999999986542 2345678889999999999999999999999999999
Q ss_pred EEeecCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcch
Q 012988 164 IMEYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLY 242 (452)
Q Consensus 164 V~E~~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~ 242 (452)
||||+++++|..++.+ ...+++..+..++.|++.||.|||+.||+||||||+||+++.+|.++|+|||++.......
T Consensus 87 v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-- 164 (292)
T cd06644 87 MIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL-- 164 (292)
T ss_pred EEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccccc--
Confidence 9999999999888754 4678999999999999999999999999999999999999999999999999876532110
Q ss_pred hhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhcc-----CCCCCccch
Q 012988 243 AIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLL-----KKGYGMECD 317 (452)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~-----~~~~~~~~D 317 (452)
.......|++.|+|||++. ...++.++|
T Consensus 165 -----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~D 197 (292)
T cd06644 165 -----------------------------------------------QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKAD 197 (292)
T ss_pred -----------------------------------------------cccceecCCccccCceeeccccccCCCCCchhh
Confidence 0011346889999999985 345788999
Q ss_pred hhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcC
Q 012988 318 WWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFK 396 (452)
Q Consensus 318 iwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~ 396 (452)
||||||++|+|++|.+||...+......++.... ....+....++.++.+||.+||. ||.+|| ++.++++||||.
T Consensus 198 v~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~il~~~~~~ 273 (292)
T cd06644 198 IWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE-PPTLSQPSKWSMEFRDFLKTALDKHPETRP---SAAQLLEHPFVS 273 (292)
T ss_pred hHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCC-CccCCCCcccCHHHHHHHHHHhcCCcccCc---CHHHHhcCcccc
Confidence 9999999999999999998877666555554321 12222334678999999999999 999999 999999999999
Q ss_pred CCCccccc
Q 012988 397 DVVWDKLY 404 (452)
Q Consensus 397 ~~~~~~l~ 404 (452)
.++|.+..
T Consensus 274 ~~~~~~~~ 281 (292)
T cd06644 274 SVTSNRPL 281 (292)
T ss_pred ccccchhH
Confidence 99998764
No 136
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=4.3e-45 Score=355.33 Aligned_cols=255 Identities=30% Similarity=0.438 Sum_probs=214.6
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++.+.||+|+||.||+|.+..++..+|+|.+.... .......+.+|+.+++.++||||++++++|.+++.+|+||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEe
Confidence 47999999999999999999999999999999886432 2233456788999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHK-HNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~-~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
||+++++|.+++...+.+++..++.++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||++......
T Consensus 79 ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~----- 153 (308)
T cd06615 79 EHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----- 153 (308)
T ss_pred eccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccc-----
Confidence 999999999999888889999999999999999999997 69999999999999999999999999998654211
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHH
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 324 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvi 324 (452)
.....+|++.|+|||++.+..++.++|+|||||+
T Consensus 154 ----------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~ 187 (308)
T cd06615 154 ----------------------------------------------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLS 187 (308)
T ss_pred ----------------------------------------------ccccCCCCcCccChhHhcCCCCCccchHHHHHHH
Confidence 0113568999999999988889999999999999
Q ss_pred HHHhhhCCCCCCCCChHHHHHHHhhccC-----------------------------------cccCCCCCCCChhHHHH
Q 012988 325 MYEMLVGYPPFYADDPITTCRKIVHWRN-----------------------------------HLKFPDDSKLSPEAKDL 369 (452)
Q Consensus 325 l~elltG~~Pf~~~~~~~~~~~i~~~~~-----------------------------------~~~~p~~~~~s~~~~dL 369 (452)
+|+|++|..||...+.......+..... ....|. ..++.++++|
T Consensus 188 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l 266 (308)
T cd06615 188 LVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPS-GAFSDEFQDF 266 (308)
T ss_pred HHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcC-cccCHHHHHH
Confidence 9999999999976654333222211000 011111 1367889999
Q ss_pred HHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 370 ICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 370 i~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
|.+||. ||.+|| ++.+++.||||.+
T Consensus 267 i~~~l~~~P~~Rp---t~~~ll~~~~~~~ 292 (308)
T cd06615 267 VDKCLKKNPKERA---DLKELTKHPFIKR 292 (308)
T ss_pred HHHHccCChhhCc---CHHHHhcChhhhh
Confidence 999998 999999 9999999999975
No 137
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=2e-48 Score=352.17 Aligned_cols=254 Identities=28% Similarity=0.499 Sum_probs=222.1
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
-|.++.+||+|+||.||+|.++.+|+.+|||.+... ...+.+..|+.||++++.|++|++|+.+.....++||||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVME 108 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVME 108 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehh
Confidence 378899999999999999999999999999987543 356788899999999999999999999988889999999
Q ss_pred ecCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 167 YLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 167 ~~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
||..|+..+.++- +++++++++..+++..+.||+|||...-||||||..|||++.+|++||+|||.|-.+..
T Consensus 109 YCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD------- 181 (502)
T KOG0574|consen 109 YCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTD------- 181 (502)
T ss_pred hcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhh-------
Confidence 9999999999854 67899999999999999999999999999999999999999999999999999876531
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 325 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil 325 (452)
......+..|||.|||||++..-+|+.++||||||+..
T Consensus 182 ------------------------------------------TMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITa 219 (502)
T KOG0574|consen 182 ------------------------------------------TMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITA 219 (502)
T ss_pred ------------------------------------------hHHhhCccccCcccccHHHHHHhccchhhhHhhhcchh
Confidence 11223478899999999999999999999999999999
Q ss_pred HHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCC
Q 012988 326 YEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 326 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
.||..|++||..-.+...+..|-. +.+..|..+...|.++.|||++||. +|++|. ++.++++|||.++-
T Consensus 220 IEMAEG~PPYsDIHPMRAIFMIPT-~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~---TA~~L~~H~FiknA 289 (502)
T KOG0574|consen 220 IEMAEGRPPYSDIHPMRAIFMIPT-KPPPTFKKPEEWSSEFNDFIRSCLIKKPEERK---TALRLCEHTFIKNA 289 (502)
T ss_pred hhhhcCCCCcccccccceeEeccC-CCCCCCCChHhhhhHHHHHHHHHhcCCHHHHH---HHHHHhhhhhhcCC
Confidence 999999999987666554444432 2333444444678999999999998 999999 99999999999864
No 138
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.4e-45 Score=391.04 Aligned_cols=264 Identities=29% Similarity=0.468 Sum_probs=218.3
Q ss_pred hcCCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEc-
Q 012988 79 KRHKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQD- 157 (452)
Q Consensus 79 ~~~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~- 157 (452)
..+....++|++++.||+|+||+||+|+++.++..||+|++..... .......+..|+.+++.++|||||+++++|.+
T Consensus 6 ~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l-~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de 84 (1021)
T PTZ00266 6 DDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL-KEREKSQLVIEVNVMRELKHKNIVRYIDRFLNK 84 (1021)
T ss_pred cCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc-CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEec
Confidence 4566778899999999999999999999999999999999875533 22345678889999999999999999999854
Q ss_pred -CCeEEEEEeecCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC-------CeeecCCCCCcEEECCC---
Q 012988 158 -TEYLYLIMEYLPGGDMMTLLMR----EDTLTENVARFYIAQSVLAIESIHKH-------NYIHRDIKPDNLLLDKN--- 222 (452)
Q Consensus 158 -~~~~~lV~E~~~ggsL~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~-------givHrDlkp~NILl~~~--- 222 (452)
...+||||||+++|+|..+|.. ...+++..++.|+.||+.||.|||+. +||||||||+||||+.+
T Consensus 85 ~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~ 164 (1021)
T PTZ00266 85 ANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRH 164 (1021)
T ss_pred CCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccc
Confidence 4579999999999999999865 35799999999999999999999985 49999999999999642
Q ss_pred --------------CcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhc
Q 012988 223 --------------GHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNR 288 (452)
Q Consensus 223 --------------g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (452)
+.+||+|||++..+....
T Consensus 165 lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s------------------------------------------------ 196 (1021)
T PTZ00266 165 IGKITAQANNLNGRPIAKIGDFGLSKNIGIES------------------------------------------------ 196 (1021)
T ss_pred cccccccccccCCCCceEEccCCccccccccc------------------------------------------------
Confidence 358999999987653110
Q ss_pred cccccccccCCccccchhccC--CCCCccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhH
Q 012988 289 RKLAFSTVGTPDYIAPEVLLK--KGYGMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEA 366 (452)
Q Consensus 289 ~~~~~~~~Gt~~y~APE~~~~--~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~ 366 (452)
.....+||+.|+|||++.+ ..++.++|||||||+||+|++|..||...+....+...+... ..+|. ...+.++
T Consensus 197 --~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~--p~lpi-~~~S~eL 271 (1021)
T PTZ00266 197 --MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRG--PDLPI-KGKSKEL 271 (1021)
T ss_pred --cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcC--CCCCc-CCCCHHH
Confidence 1124579999999999865 458899999999999999999999998766555444444322 22222 2578999
Q ss_pred HHHHHHhhc-CccccCCCCCHHHHhcCCCcCCCC
Q 012988 367 KDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDVV 399 (452)
Q Consensus 367 ~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~~ 399 (452)
.+||.+||. +|.+|| ++.++|.||||..+.
T Consensus 272 ~dLI~~~L~~dPeeRP---Sa~QlL~h~~ik~i~ 302 (1021)
T PTZ00266 272 NILIKNLLNLSAKERP---SALQCLGYQIIKNVG 302 (1021)
T ss_pred HHHHHHHhcCChhHCc---CHHHHhccHHHhhcC
Confidence 999999999 999999 999999999998664
No 139
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=3e-45 Score=357.71 Aligned_cols=250 Identities=26% Similarity=0.406 Sum_probs=193.2
Q ss_pred eceeccCCCeEEEEEEEc--cCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEc--CCeEEEEEe
Q 012988 91 LTIIGRGAFGEVRLCREK--KSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQD--TEYLYLIME 166 (452)
Q Consensus 91 ~~~LG~G~~g~V~~a~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~--~~~~~lV~E 166 (452)
.++||+|+||+||+|+++ .++..||+|++.... ....+.+|+.+++.++||||++++++|.. ...+|+|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-----ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-----CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence 468999999999999975 467899999986542 12346789999999999999999999854 457899999
Q ss_pred ecCCCChHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEE----CCCCcEEEeeccCC
Q 012988 167 YLPGGDMMTLLMRE---------DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLL----DKNGHMKLSDFGLC 233 (452)
Q Consensus 167 ~~~ggsL~~~l~~~---------~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl----~~~g~ikl~DFGla 233 (452)
|+ +++|..++... ..+++..++.++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 81 ~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 81 YA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred cc-CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 99 56888887532 258999999999999999999999999999999999999 45679999999999
Q ss_pred ccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCC
Q 012988 234 KPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGY 312 (452)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~ 312 (452)
+....... ........+||+.|+|||++.+ ..+
T Consensus 160 ~~~~~~~~----------------------------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~ 193 (317)
T cd07868 160 RLFNSPLK----------------------------------------------PLADLDPVVVTFWYRAPELLLGARHY 193 (317)
T ss_pred eccCCCCc----------------------------------------------cccccCCccccccccCCHHHcCCCCc
Confidence 86532110 0001124578999999999987 458
Q ss_pred CccchhhhhhHHHHHhhhCCCCCCCCCh---------HHHHHHHhhccC---------cccCCC----------------
Q 012988 313 GMECDWWSLGAIMYEMLVGYPPFYADDP---------ITTCRKIVHWRN---------HLKFPD---------------- 358 (452)
Q Consensus 313 ~~~~DiwSlGvil~elltG~~Pf~~~~~---------~~~~~~i~~~~~---------~~~~p~---------------- 358 (452)
+.++|||||||++|+|++|++||.+... ...+..+..... ...++.
T Consensus 194 ~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (317)
T cd07868 194 TKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNC 273 (317)
T ss_pred CchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcc
Confidence 9999999999999999999999975432 112222211000 000000
Q ss_pred ---------CCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 359 ---------DSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 359 ---------~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
....+.++.+||.+||+ ||.+|+ |++|+++||||
T Consensus 274 ~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~---t~~e~l~hp~f 317 (317)
T cd07868 274 SLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRI---TSEQAMQDPYF 317 (317)
T ss_pred cccchHHhcCCCCChHHHHHHHHHhccCcccCC---CHHHHhcCCCC
Confidence 01235678999999999 999999 99999999998
No 140
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.7e-44 Score=343.08 Aligned_cols=260 Identities=31% Similarity=0.527 Sum_probs=217.0
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhc--ccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC--CeE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMV--KRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT--EYL 161 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~--~~~ 161 (452)
.+|++.+.||+|+||.||+|.+..+|..||+|++...... .......+.+|+.+++.++||||+++++++.+. ..+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 5799999999999999999999999999999988643211 123456788899999999999999999998764 578
Q ss_pred EEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 162 YLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
++||||+++++|.+++.+...+++..+..++.|++.||.|||++||+|+||||+|||++.++.++|+|||++..+.....
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~ 161 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICL 161 (265)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccc
Confidence 89999999999999998878899999999999999999999999999999999999999999999999999875431100
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSL 321 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSl 321 (452)
. ........||..|+|||++.+..++.++|||||
T Consensus 162 ~----------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~sl 195 (265)
T cd06652 162 S----------------------------------------------GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSV 195 (265)
T ss_pred c----------------------------------------------ccccccCCCCccccChhhhcCCCCCcchhHHHH
Confidence 0 000113458899999999988889999999999
Q ss_pred hHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhcCccccCCCCCHHHHhcCCCcC
Q 012988 322 GAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLCDVEHRLGTGGAHQIKAHPWFK 396 (452)
Q Consensus 322 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~dp~~R~~~~~~~eil~hp~f~ 396 (452)
||++|+|++|+.||...........+.........| ..++..+.++|.+|+.+|..|| ++++++.|||++
T Consensus 196 G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~p~~Rp---~~~~il~~~~~~ 265 (265)
T cd06652 196 GCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLP--PHVSDHCRDFLKRIFVEAKLRP---SADELLRHTFVH 265 (265)
T ss_pred HHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCc--hhhCHHHHHHHHHHhcChhhCC---CHHHHhcCcccC
Confidence 999999999999998776665555544322222233 3578899999999998999999 999999999985
No 141
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=5.4e-45 Score=345.37 Aligned_cols=264 Identities=49% Similarity=0.887 Sum_probs=224.4
Q ss_pred eccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeecCCCCh
Q 012988 94 IGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDM 173 (452)
Q Consensus 94 LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~ggsL 173 (452)
||.|+||.||+|.+..+|+.||+|++.............+.+|+.+++.++||||+++++.+.....+|+||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 68999999999999999999999999776554445667889999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccccccCcc
Q 012988 174 MTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDE 253 (452)
Q Consensus 174 ~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~ 253 (452)
.+++.+.+.+++..+..++.|++.||.|||++||+|+||+|+||+++.++.++|+|||++...........
T Consensus 81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~--------- 151 (265)
T cd05579 81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINL--------- 151 (265)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccc---------
Confidence 99998878899999999999999999999999999999999999999999999999999875421110000
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhhCCC
Q 012988 254 NMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 333 (452)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~elltG~~ 333 (452)
...........++..|+|||++.+..++.++||||||+++|+|++|..
T Consensus 152 --------------------------------~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~ 199 (265)
T cd05579 152 --------------------------------NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIP 199 (265)
T ss_pred --------------------------------ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCC
Confidence 000001123568889999999998889999999999999999999999
Q ss_pred CCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCCCc
Q 012988 334 PFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDVVW 400 (452)
Q Consensus 334 Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~~~ 400 (452)
||...........+.. ....+|....++..+.+||.+||+ +|.+||+..++.++++||||++++|
T Consensus 200 p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~~~ 265 (265)
T cd05579 200 PFHGETPEEIFQNILN--GKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGIDW 265 (265)
T ss_pred CCCCCCHHHHHHHHhc--CCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCCCC
Confidence 9998888777777665 334455443458999999999999 9999995555599999999999998
No 142
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.1e-44 Score=347.49 Aligned_cols=252 Identities=25% Similarity=0.403 Sum_probs=210.1
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++++.||+|+||.||+|.+..+++.||+|++.... .......+.+|+.+++.++||||+++++++...+..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEE
Confidence 46899999999999999999999999999999986542 2223456888999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
||+++++|..+ ..+++..+..++.|++.||.|||+.||+|+||||+|||++.++.++|+|||++..+...
T Consensus 79 e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~------ 148 (279)
T cd06619 79 EFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS------ 148 (279)
T ss_pred ecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc------
Confidence 99999998654 35788999999999999999999999999999999999999999999999998754311
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 325 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil 325 (452)
.....+||..|+|||++.+..++.++|+|||||++
T Consensus 149 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l 183 (279)
T cd06619 149 ---------------------------------------------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISF 183 (279)
T ss_pred ---------------------------------------------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHH
Confidence 01134689999999999999999999999999999
Q ss_pred HHhhhCCCCCCCCCh-------HHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 326 YEMLVGYPPFYADDP-------ITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 326 ~elltG~~Pf~~~~~-------~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
|+|++|..||..... ......+.. ......+ ....++++.+||.+||+ ||.+|| ++.+++.||||..
T Consensus 184 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rp---~~~eil~~~~~~~ 258 (279)
T cd06619 184 MELALGRFPYPQIQKNQGSLMPLQLLQCIVD-EDPPVLP-VGQFSEKFVHFITQCMRKQPKERP---APENLMDHPFIVQ 258 (279)
T ss_pred HHHHhCCCCchhhcccccccchHHHHHHHhc-cCCCCCC-CCcCCHHHHHHHHHHhhCChhhCC---CHHHHhcCccccc
Confidence 999999999965321 112222221 1111222 23578899999999999 999999 9999999999986
Q ss_pred CC
Q 012988 398 VV 399 (452)
Q Consensus 398 ~~ 399 (452)
.+
T Consensus 259 ~~ 260 (279)
T cd06619 259 YN 260 (279)
T ss_pred cc
Confidence 54
No 143
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.2e-44 Score=348.97 Aligned_cols=266 Identities=42% Similarity=0.768 Sum_probs=219.8
Q ss_pred CeeEeceeccCCCeEEEEEEEc---cCCCEEEEEEeecchhcc-cchHHHHHHHHHHHHHh-CCCceeeEEEEEEcCCeE
Q 012988 87 DFELLTIIGRGAFGEVRLCREK---KSGNIYAMKKLKKSEMVK-RGQVEHVRAERNLLAEV-ASHCIVKLYYSFQDTEYL 161 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~---~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~~~ 161 (452)
+|++.+.||.|+||.||+|.+. .+|..||+|++....... ....+++.+|+.+++.+ +|++|++++++|..+..+
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4899999999999999999875 478999999987643322 23346678899999999 589999999999999999
Q ss_pred EEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 162 YLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
|+||||+++++|.+++.....+++..+..++.|++.||.|||+.|++||||+|+|||++.++.+||+|||++........
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (290)
T cd05613 81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV 160 (290)
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccc
Confidence 99999999999999998888899999999999999999999999999999999999999999999999999876431100
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC--CCCCccchhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK--KGYGMECDWW 319 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~--~~~~~~~Diw 319 (452)
.......|+..|+|||.+.+ ..++.++|||
T Consensus 161 ------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~ 192 (290)
T cd05613 161 ------------------------------------------------ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWW 192 (290)
T ss_pred ------------------------------------------------cccccccCCcccCChhhccCCCCCCCccccHH
Confidence 01123468999999999875 3468899999
Q ss_pred hhhHHHHHhhhCCCCCCCCChH----HHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCC--CCHHHHhcC
Q 012988 320 SLGAIMYEMLVGYPPFYADDPI----TTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGT--GGAHQIKAH 392 (452)
Q Consensus 320 SlGvil~elltG~~Pf~~~~~~----~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~--~~~~eil~h 392 (452)
|||+++|+|++|..||...... .....+.. ....+| ..+++.+.+||.+||. ||.+|++. .++.+++.|
T Consensus 193 slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 193 SMGVLMYELLTGASPFTVDGEKNSQAEISRRILK--SEPPYP--QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred HHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhc--cCCCCC--ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 9999999999999999754322 22222222 222233 3588999999999999 99999854 389999999
Q ss_pred CCcCCCCccccc
Q 012988 393 PWFKDVVWDKLY 404 (452)
Q Consensus 393 p~f~~~~~~~l~ 404 (452)
|||+.++|+.+.
T Consensus 269 ~~~~~~~~~~~~ 280 (290)
T cd05613 269 PFFQKINWDDLA 280 (290)
T ss_pred cccccCCHHHHh
Confidence 999999998874
No 144
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-45 Score=359.21 Aligned_cols=253 Identities=25% Similarity=0.387 Sum_probs=214.4
Q ss_pred hcCCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC
Q 012988 79 KRHKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT 158 (452)
Q Consensus 79 ~~~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~ 158 (452)
..+.+....+++++.||+|-||.||+|.... ...||+|.++...+. .+.+.+|+.+|+.|+|++||++++++..+
T Consensus 199 d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m~----~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~ 273 (468)
T KOG0197|consen 199 DPWEIPREELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSMS----PEAFLREAQIMKKLRHEKLVKLYGVCTKQ 273 (468)
T ss_pred CCeeecHHHHHHHHHhcCCccceEEEEEEcC-CCcccceEEeccccC----hhHHHHHHHHHHhCcccCeEEEEEEEecC
Confidence 3455556677889999999999999998763 347999998765332 34677999999999999999999999998
Q ss_pred CeEEEEEeecCCCChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccC
Q 012988 159 EYLYLIMEYLPGGDMMTLLMR--EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPL 236 (452)
Q Consensus 159 ~~~~lV~E~~~ggsL~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~ 236 (452)
+.+|||||||+.|+|.++|+. ...+...+...++.||+.|++||+++++|||||.+.||||++++.+||+|||||+..
T Consensus 274 ~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~ 353 (468)
T KOG0197|consen 274 EPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLI 353 (468)
T ss_pred CceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEccccccccc
Confidence 899999999999999999987 467889999999999999999999999999999999999999999999999999954
Q ss_pred CCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccc
Q 012988 237 DCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMEC 316 (452)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~ 316 (452)
........ ...--...|.|||.+....++.++
T Consensus 354 ~d~~Y~~~------------------------------------------------~~~kfPIkWtAPEa~~~~~FS~kS 385 (468)
T KOG0197|consen 354 GDDEYTAS------------------------------------------------EGGKFPIKWTAPEALNYGKFSSKS 385 (468)
T ss_pred CCCceeec------------------------------------------------CCCCCCceecCHHHHhhCCccccc
Confidence 32211000 011123579999999999999999
Q ss_pred hhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHh
Q 012988 317 DWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIK 390 (452)
Q Consensus 317 DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil 390 (452)
|||||||+||||+| |+.|+.+.+..+.+..+..+ ..+|.+..+|+++-+++..|+. +|++|| |++.+.
T Consensus 386 DVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~G---yRlp~P~~CP~~vY~lM~~CW~~~P~~RP---tF~~L~ 455 (468)
T KOG0197|consen 386 DVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERG---YRLPRPEGCPDEVYELMKSCWHEDPEDRP---TFETLR 455 (468)
T ss_pred ceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhcc---CcCCCCCCCCHHHHHHHHHHhhCCcccCC---CHHHHH
Confidence 99999999999998 99999999999999888753 3455556899999999999999 999999 766443
No 145
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=7.6e-45 Score=348.36 Aligned_cols=259 Identities=29% Similarity=0.484 Sum_probs=220.0
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
.++|++++.||.|+||+||+|.+..++..||+|++... .....+.+..|+.+++.++||||+++++++.+...+|+|
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWIL 80 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Confidence 46799999999999999999999989999999998644 223446788899999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 165 MEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
|||+++++|..++... ..+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~--- 157 (280)
T cd06611 81 IEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL--- 157 (280)
T ss_pred eeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccc---
Confidence 9999999999998763 579999999999999999999999999999999999999999999999999876542110
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhcc-----CCCCCccchh
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLL-----KKGYGMECDW 318 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~-----~~~~~~~~Di 318 (452)
.......||+.|+|||++. ...++.++|+
T Consensus 158 ----------------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi 191 (280)
T cd06611 158 ----------------------------------------------QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADI 191 (280)
T ss_pred ----------------------------------------------cccceeecchhhcCHHHHhhcccCCCCCCccccH
Confidence 0112356899999999985 3456789999
Q ss_pred hhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 319 WSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 319 wSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
|||||++|+|++|..||...+.......+.... ...+.....++.++.+||.+||. +|.+|| ++.++++||||.+
T Consensus 192 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~il~~~~~~~ 267 (280)
T cd06611 192 WSLGITLIELAQMEPPHHELNPMRVLLKILKSE-PPTLDQPSKWSSSFNDFLKSCLVKDPDDRP---TAAELLKHPFVSD 267 (280)
T ss_pred HHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCC-CCCcCCcccCCHHHHHHHHHHhccChhhCc---CHHHHhcChhhcc
Confidence 999999999999999998887776666665421 12222334688999999999998 999999 9999999999987
Q ss_pred CC
Q 012988 398 VV 399 (452)
Q Consensus 398 ~~ 399 (452)
..
T Consensus 268 ~~ 269 (280)
T cd06611 268 QS 269 (280)
T ss_pred cc
Confidence 64
No 146
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.7e-44 Score=343.43 Aligned_cols=259 Identities=32% Similarity=0.539 Sum_probs=216.1
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhc--ccchHHHHHHHHHHHHHhCCCceeeEEEEEEc--CCeE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMV--KRGQVEHVRAERNLLAEVASHCIVKLYYSFQD--TEYL 161 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~--~~~~ 161 (452)
.+|++.+.||+|+||.||+|.+..++..||+|++...... .......+.+|+.+++.++||||+++++++.+ ...+
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 4799999999999999999999999999999988654321 22345678889999999999999999999875 3678
Q ss_pred EEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 162 YLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
+++|||+++++|.+++.....+++.....++.|++.||.|||++||+||||||+||+++.++.++|+|||+++.+.....
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 161 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM 161 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccc
Confidence 99999999999999998888899999999999999999999999999999999999999999999999999886531100
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSL 321 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSl 321 (452)
. ........|+..|+|||.+.+..++.++|||||
T Consensus 162 ~----------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~sl 195 (266)
T cd06651 162 S----------------------------------------------GTGIRSVTGTPYWMSPEVISGEGYGRKADVWSL 195 (266)
T ss_pred c----------------------------------------------CCccccCCccccccCHHHhCCCCCCchhhhHHH
Confidence 0 000012458899999999998889999999999
Q ss_pred hHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcC
Q 012988 322 GAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFK 396 (452)
Q Consensus 322 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~ 396 (452)
||++|+|++|+.||...+.......+........+|. .+++.+++||. ||. +|.+|| ++++|+.||||+
T Consensus 196 G~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~-~~~~~p~~Rp---~~~eil~hp~~~ 265 (266)
T cd06651 196 GCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPS--HISEHARDFLG-CIFVEARHRP---SAEELLRHPFAQ 265 (266)
T ss_pred HHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCch--hcCHHHHHHHH-HhcCChhhCc---CHHHHhcCcccc
Confidence 9999999999999987766665555544333333443 57899999995 565 999999 999999999996
No 147
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=8.7e-45 Score=348.95 Aligned_cols=247 Identities=21% Similarity=0.255 Sum_probs=210.9
Q ss_pred CCeeEe--ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEc----CC
Q 012988 86 DDFELL--TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQD----TE 159 (452)
Q Consensus 86 ~~y~i~--~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~----~~ 159 (452)
++++.. ..||+|++|.||+|.. +|+.||||++.+.........+.+.+|+.+|+.++||||+++++++.+ ..
T Consensus 18 ~~i~~~~~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~ 95 (283)
T PHA02988 18 DDIDKYTSVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLP 95 (283)
T ss_pred HHcCCCCCeEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCC
Confidence 344444 5799999999999976 689999999976543333335678899999999999999999999877 45
Q ss_pred eEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCCCcEEECCCCcEEEeeccCCccCCC
Q 012988 160 YLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHK-HNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDC 238 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~-~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~ 238 (452)
.+++||||+++|+|.+++.....+++.....++.+++.||.|||+ .+++||||||+|||++.+|.+||+|||+++.+..
T Consensus 96 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~ 175 (283)
T PHA02988 96 RLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSS 175 (283)
T ss_pred ceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhcc
Confidence 789999999999999999888889999999999999999999998 4999999999999999999999999999875421
Q ss_pred CcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC--CCCCccc
Q 012988 239 STLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK--KGYGMEC 316 (452)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~--~~~~~~~ 316 (452)
. .....||+.|+|||++.+ ..++.++
T Consensus 176 ~----------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~k~ 203 (283)
T PHA02988 176 P----------------------------------------------------PFKNVNFMVYFSYKMLNDIFSEYTIKD 203 (283)
T ss_pred c----------------------------------------------------cccccCcccccCHHHhhhccccccchh
Confidence 1 013468899999999976 6899999
Q ss_pred hhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 317 DWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 317 DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
|||||||++|||++|..||.+.+..+.+..+......+.+| ..+++++++||.+||+ ||.+|| ++.+++.
T Consensus 204 Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~~l~~li~~cl~~dp~~Rp---s~~ell~ 274 (283)
T PHA02988 204 DIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLP--LDCPLEIKCIVEACTSHDSIKRP---NIKEILY 274 (283)
T ss_pred hhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC--CcCcHHHHHHHHHHhcCCcccCc---CHHHHHH
Confidence 99999999999999999999988888777776654555544 3578999999999999 999999 8998874
No 148
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.1e-45 Score=361.51 Aligned_cols=251 Identities=22% Similarity=0.351 Sum_probs=202.0
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
..+|++++.||+|+||.||+|.+..++..||+|+..+. ....|+.+++.++||||+++++++.+....|+|
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 135 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMV 135 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEE
Confidence 35799999999999999999999999999999975433 234589999999999999999999999999999
Q ss_pred EeecCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 165 MEYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
||++ .++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 136 ~e~~-~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 210 (357)
T PHA03209 136 LPHY-SSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA---- 210 (357)
T ss_pred EEcc-CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccC----
Confidence 9999 5688888755 467999999999999999999999999999999999999999999999999998743110
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhH
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 323 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGv 323 (452)
.......||+.|+|||++.+..++.++|||||||
T Consensus 211 ----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 244 (357)
T PHA03209 211 ----------------------------------------------PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGI 244 (357)
T ss_pred ----------------------------------------------cccccccccccccCCeecCCCCCCchhhHHHHHH
Confidence 0112456999999999999999999999999999
Q ss_pred HHHHhhhCCCCCCCCChH----------HHHHHHhhc--cCcccCC----------------------------CCCCCC
Q 012988 324 IMYEMLVGYPPFYADDPI----------TTCRKIVHW--RNHLKFP----------------------------DDSKLS 363 (452)
Q Consensus 324 il~elltG~~Pf~~~~~~----------~~~~~i~~~--~~~~~~p----------------------------~~~~~s 363 (452)
++|||+++..|+....+. ..+..+... .....++ ....++
T Consensus 245 vl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (357)
T PHA03209 245 VLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLP 324 (357)
T ss_pred HHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCC
Confidence 999999865554332110 111111110 0011111 012457
Q ss_pred hhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCC
Q 012988 364 PEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 364 ~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
.++.+||.+||+ ||.+|| ++.|+++||||+++
T Consensus 325 ~~~~~li~~mL~~dP~~Rp---ta~e~l~hp~f~~~ 357 (357)
T PHA03209 325 IDGEFLVHKMLTFDAAMRP---SAEEILNYPMFAQL 357 (357)
T ss_pred chHHHHHHHHHcCCcccCc---CHHHHhcCchhccC
Confidence 788899999999 999999 99999999999863
No 149
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=8.5e-45 Score=345.46 Aligned_cols=255 Identities=28% Similarity=0.488 Sum_probs=213.2
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
.++|++.+.||+|+||.||+|.+..++..||+|+++... ......+.+|+.+++.++||||+++++++...+.+|+|
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv 84 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP---GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWIC 84 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Confidence 457999999999999999999999999999999986542 22335577899999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 165 MEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
|||+++++|.+++...+.+++..+..++.|++.||.|||+.||+|+||||+||+++.++.++|+|||++..+....
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~---- 160 (267)
T cd06645 85 MEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATI---- 160 (267)
T ss_pred EeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcc----
Confidence 9999999999999888899999999999999999999999999999999999999999999999999987542110
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhcc---CCCCCccchhhhh
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLL---KKGYGMECDWWSL 321 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~---~~~~~~~~DiwSl 321 (452)
.......||+.|+|||++. ...++.++|+|||
T Consensus 161 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSl 195 (267)
T cd06645 161 ---------------------------------------------AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAV 195 (267)
T ss_pred ---------------------------------------------cccccccCcccccChhhhccccCCCCCchhhhHHH
Confidence 0011346899999999985 4568899999999
Q ss_pred hHHHHHhhhCCCCCCCCChHHHHHHHhhccCc-ccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCC
Q 012988 322 GAIMYEMLVGYPPFYADDPITTCRKIVHWRNH-LKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPW 394 (452)
Q Consensus 322 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~~-~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~ 394 (452)
||++|+|++|..||....+............. ........++..+.+||.+||. +|.+|| ++.+++.|||
T Consensus 196 G~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~---~~~~ll~~~~ 267 (267)
T cd06645 196 GITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRP---TAEKLLQHPF 267 (267)
T ss_pred HHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCc---CHHHHhcCCC
Confidence 99999999999999766554443333221111 1111122467899999999999 999999 9999999998
No 150
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2e-44 Score=346.11 Aligned_cols=255 Identities=33% Similarity=0.504 Sum_probs=209.1
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
+|++++.||.|+||.||+|.++.++..||+|++..... .......+.+|+.+++.++||||+++++++.++..+|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE-EEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc-cCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence 58999999999999999999999999999999865422 22334567889999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 167 YLPGGDMMTLLMRE---DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 167 ~~~ggsL~~~l~~~---~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
|++ ++|.+++... ..+++..++.++.|++.||.|||++||+||||||+|||++.+|.++|+|||++.......
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--- 155 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV--- 155 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc---
Confidence 996 6888887542 568999999999999999999999999999999999999999999999999987543110
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchhhhhh
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDWWSLG 322 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~DiwSlG 322 (452)
.......|++.|+|||++.+ ..++.++||||||
T Consensus 156 ----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG 189 (285)
T cd07861 156 ----------------------------------------------RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIG 189 (285)
T ss_pred ----------------------------------------------ccccCCcccccccChHHhcCCCCcCcHHHHHHHH
Confidence 00112357889999999875 4578999999999
Q ss_pred HHHHHhhhCCCCCCCCChHHHHHHHhhccCcc----------------cC---------CCCCCCChhHHHHHHHhhc-C
Q 012988 323 AIMYEMLVGYPPFYADDPITTCRKIVHWRNHL----------------KF---------PDDSKLSPEAKDLICRLLC-D 376 (452)
Q Consensus 323 vil~elltG~~Pf~~~~~~~~~~~i~~~~~~~----------------~~---------p~~~~~s~~~~dLi~~mL~-d 376 (452)
|++|+|++|++||.+.........+....... .+ .....+++++++||.+||+ |
T Consensus 190 ~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 269 (285)
T cd07861 190 TIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYD 269 (285)
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCC
Confidence 99999999999998776554433332110000 00 0112478999999999999 9
Q ss_pred ccccCCCCCHHHHhcCCCc
Q 012988 377 VEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 377 p~~R~~~~~~~eil~hp~f 395 (452)
|.+|| ++.+|+.||||
T Consensus 270 P~~Rp---t~~~ll~~~~~ 285 (285)
T cd07861 270 PAKRI---SAKKALNHPYF 285 (285)
T ss_pred hhhCC---CHHHHhcCCCC
Confidence 99999 99999999998
No 151
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=9.9e-45 Score=343.26 Aligned_cols=253 Identities=42% Similarity=0.767 Sum_probs=218.4
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
+|++.+.||.|+||.||+|.+..++..||+|++.+...........+.+|+.+++.++||||+++++++.+...+|+|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 58999999999999999999999999999999987655444556788999999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcc
Q 012988 167 YLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHE 246 (452)
Q Consensus 167 ~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~ 246 (452)
|+.|++|..++.....+++..+..++.|++.||.|||++||+|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~------ 154 (258)
T cd05578 81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT------ 154 (258)
T ss_pred CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc------
Confidence 99999999999877789999999999999999999999999999999999999999999999999987653210
Q ss_pred ccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHH
Q 012988 247 HKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 326 (452)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ 326 (452)
......|+..|+|||++.+..++.++|+||||+++|
T Consensus 155 --------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~ 190 (258)
T cd05578 155 --------------------------------------------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAY 190 (258)
T ss_pred --------------------------------------------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHH
Confidence 011345888999999999888999999999999999
Q ss_pred HhhhCCCCCCCCCh--HHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCH--HHHhcCCCc
Q 012988 327 EMLVGYPPFYADDP--ITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGA--HQIKAHPWF 395 (452)
Q Consensus 327 elltG~~Pf~~~~~--~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~--~eil~hp~f 395 (452)
+|++|..||...+. ...+...... ....+| ..++..+.++|.+||. ||.+|+ ++ .++++||||
T Consensus 191 ~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~i~~~l~~~p~~R~---~~~~~~l~~~~~~ 258 (258)
T cd05578 191 ECLRGKRPYRGHSRTIRDQIRAKQET-ADVLYP--ATWSTEAIDAINKLLERDPQKRL---GDNLKDLKNHPYF 258 (258)
T ss_pred HHHhCCCCCCCCCccHHHHHHHHhcc-ccccCc--ccCcHHHHHHHHHHccCChhHcC---CccHHHHhcCCCC
Confidence 99999999987764 2222222221 222333 3678999999999999 999999 66 999999998
No 152
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=5.4e-44 Score=337.71 Aligned_cols=253 Identities=29% Similarity=0.549 Sum_probs=214.4
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEc-CCeEEEEE
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQD-TEYLYLIM 165 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~-~~~~~lV~ 165 (452)
+|++++.||+|+||.||++.++.+++.||+|++..... .......+.+|+.+++.++|+|++++++.+.. +..+|+||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA-SRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc-CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence 48999999999999999999999999999999865432 22345568889999999999999999998874 44689999
Q ss_pred eecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 166 EYLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 166 E~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
||+++++|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++.......
T Consensus 80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~--- 156 (257)
T cd08223 80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC--- 156 (257)
T ss_pred cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccC---
Confidence 999999999998763 468999999999999999999999999999999999999999999999999987552110
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhH
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 323 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGv 323 (452)
.......|++.|+|||++.+..++.++||||||+
T Consensus 157 ----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~ 190 (257)
T cd08223 157 ----------------------------------------------DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGC 190 (257)
T ss_pred ----------------------------------------------CccccccCCcCccChhHhcCCCCCchhhhHHHHH
Confidence 0011346889999999999999999999999999
Q ss_pred HHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 324 IMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 324 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
++|+|++|+.||...+.......+..... ...+ ..+++++.+||.+||. ||.+|| ++.+++.||||
T Consensus 191 il~~l~~g~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~li~~~l~~~p~~Rp---~~~~~l~~~~~ 257 (257)
T cd08223 191 CVYEMATLKHAFNAKDMNSLVYRIIEGKL-PPMP--KDYSPELGELIATMLSKRPEKRP---SVKSILRQPYI 257 (257)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHhcCC-CCCc--cccCHHHHHHHHHHhccCcccCC---CHHHHhcCCCC
Confidence 99999999999988776665555544211 1222 3688999999999999 999999 99999999998
No 153
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=2e-44 Score=347.01 Aligned_cols=273 Identities=42% Similarity=0.755 Sum_probs=223.0
Q ss_pred CeeEeceeccCCCeEEEEEEEc---cCCCEEEEEEeecchhcc-cchHHHHHHHHHHHHHh-CCCceeeEEEEEEcCCeE
Q 012988 87 DFELLTIIGRGAFGEVRLCREK---KSGNIYAMKKLKKSEMVK-RGQVEHVRAERNLLAEV-ASHCIVKLYYSFQDTEYL 161 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~---~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~~~ 161 (452)
+|++.+.||+|+||.||+|++. .++..||||++++..... ......+.+|+.++..+ +||||+++++.+.....+
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4899999999999999999864 467899999987654322 23345678899999999 599999999999999999
Q ss_pred EEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 162 YLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
|+||||+++|+|.+++.....+++..++.++.|++.||.|||+.|++||||||.||+++.++.++|+|||+++.+....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 159 (288)
T cd05583 81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEE- 159 (288)
T ss_pred EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccccccccc-
Confidence 9999999999999999887889999999999999999999999999999999999999999999999999987643110
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCC--CCccchhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKG--YGMECDWW 319 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~--~~~~~Diw 319 (452)
........|+..|+|||.+.+.. ++.++|||
T Consensus 160 -----------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~ 192 (288)
T cd05583 160 -----------------------------------------------EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWW 192 (288)
T ss_pred -----------------------------------------------ccccccccCCccccCHHHhcCCCCCCcchhhhH
Confidence 00011346889999999987654 78899999
Q ss_pred hhhHHHHHhhhCCCCCCCCCh----HHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCC
Q 012988 320 SLGAIMYEMLVGYPPFYADDP----ITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPW 394 (452)
Q Consensus 320 SlGvil~elltG~~Pf~~~~~----~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~ 394 (452)
|||+++|+|++|..||...+. ......+.. ..... ...++..+.+||.+||. ||++||+..++.++++|||
T Consensus 193 slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~ 268 (288)
T cd05583 193 SLGVLTFELLTGASPFTVDGEQNSQSEISRRILK--SKPPF--PKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPF 268 (288)
T ss_pred HHHHHHHHHHhCCCCcccCcccchHHHHHHHHHc--cCCCC--CcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcc
Confidence 999999999999999964332 222223322 22222 33578999999999999 9999997667899999999
Q ss_pred cCCCCccccc--cCCCCcc
Q 012988 395 FKDVVWDKLY--EMEAAFK 411 (452)
Q Consensus 395 f~~~~~~~l~--~~~~~~~ 411 (452)
|+.++|+.+. ...++|.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~ 287 (288)
T cd05583 269 FQGIDWDDLAAKRIPAPFK 287 (288)
T ss_pred cccCCHHHHhhhccCCCCC
Confidence 9999998874 3445554
No 154
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=3.6e-44 Score=341.01 Aligned_cols=260 Identities=31% Similarity=0.510 Sum_probs=218.1
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcc------cchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVK------RGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEY 160 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~------~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~ 160 (452)
+|.+.+.||+|+||.||+|.+..++..||+|++....... ....+.+.+|+.+++.++||||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 4778899999999999999999999999999886543221 1234568899999999999999999999999999
Q ss_pred EEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCc
Q 012988 161 LYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCST 240 (452)
Q Consensus 161 ~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~ 240 (452)
.++||||+++++|.+++...+.+++..+..++.|++.||.|||++|++||||+|+|||++.++.++|+|||+++.+....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANS 160 (267)
T ss_pred cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccccc
Confidence 99999999999999999888889999999999999999999999999999999999999999999999999988653110
Q ss_pred chhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhh
Q 012988 241 LYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWS 320 (452)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwS 320 (452)
... +.........|++.|+|||.+.+..++.++|+||
T Consensus 161 ~~~-------------------------------------------~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~s 197 (267)
T cd06628 161 LST-------------------------------------------KTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWS 197 (267)
T ss_pred ccC-------------------------------------------CccccccccCCCcCccChhHhccCCCCchhhhHH
Confidence 000 0000111345889999999999888999999999
Q ss_pred hhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 321 LGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 321 lGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
|||++|+|++|..||...+.......+... ....+| ..++..+.+||.+||+ ||.+|| ++.++++||||
T Consensus 198 lG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~li~~~l~~~p~~Rp---~~~~il~~~~~ 267 (267)
T cd06628 198 LGCLVVEMLTGKHPFPDCTQLQAIFKIGEN-ASPEIP--SNISSEAIDFLEKTFEIDHNKRP---TAAELLKHPFL 267 (267)
T ss_pred HHHHHHHHhhCCCCCCCccHHHHHHHHhcc-CCCcCC--cccCHHHHHHHHHHccCCchhCc---CHHHHhhCCCC
Confidence 999999999999999887665555554432 122233 3578999999999999 999999 99999999998
No 155
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.7e-44 Score=343.34 Aligned_cols=255 Identities=27% Similarity=0.465 Sum_probs=212.6
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
.++|++++.||+|+||.||+|.+..++..||+|++.... ......+.+|+.+++.++||||+++++++...+.+|+|
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv 84 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP---GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWIC 84 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc---cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEE
Confidence 468999999999999999999999999999999986442 22345678899999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 165 MEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
|||+++++|.+++.....+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++..+....
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~---- 160 (267)
T cd06646 85 MEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI---- 160 (267)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccc----
Confidence 9999999999999888889999999999999999999999999999999999999999999999999988653110
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhcc---CCCCCccchhhhh
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLL---KKGYGMECDWWSL 321 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~---~~~~~~~~DiwSl 321 (452)
.......|++.|+|||.+. ...++.++|||||
T Consensus 161 ---------------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~ 195 (267)
T cd06646 161 ---------------------------------------------AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAV 195 (267)
T ss_pred ---------------------------------------------cccCccccCccccCHhHcccccCCCCcchhhHHHH
Confidence 0011346889999999985 3457889999999
Q ss_pred hHHHHHhhhCCCCCCCCChHHHHHHHhhccCc-ccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCC
Q 012988 322 GAIMYEMLVGYPPFYADDPITTCRKIVHWRNH-LKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPW 394 (452)
Q Consensus 322 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~~-~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~ 394 (452)
||++|+|++|..||....+......+...... ...+....++..+.+||++||. +|.+|| ++++|++|+|
T Consensus 196 G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp---~~~~il~~l~ 267 (267)
T cd06646 196 GITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRP---TAERLLTHLF 267 (267)
T ss_pred HHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCc---CHHHHhcCCC
Confidence 99999999999999766544433322221111 1111223578999999999999 999999 9999999998
No 156
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=3.2e-44 Score=344.51 Aligned_cols=255 Identities=30% Similarity=0.501 Sum_probs=215.5
Q ss_pred eeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEee
Q 012988 88 FELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEY 167 (452)
Q Consensus 88 y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~ 167 (452)
|++++.||.|+||.||+|.+..++..+|+|.+.... ......+.+|+.+++.++||||+++++++...+..|+||||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~ 83 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 83 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC---HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence 688899999999999999999999999999986542 23356678899999999999999999999999999999999
Q ss_pred cCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcc
Q 012988 168 LPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHE 246 (452)
Q Consensus 168 ~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~ 246 (452)
+++|+|..++.+ ...+++..+..++.|++.||.|||+.||+||||||+|||++.++.+||+|||++.......
T Consensus 84 ~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~------ 157 (282)
T cd06643 84 CAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI------ 157 (282)
T ss_pred cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEccccccccccccc------
Confidence 999999988765 4679999999999999999999999999999999999999999999999999987542110
Q ss_pred ccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhcc-----CCCCCccchhhhh
Q 012988 247 HKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLL-----KKGYGMECDWWSL 321 (452)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~-----~~~~~~~~DiwSl 321 (452)
.......||+.|+|||++. +..++.++|||||
T Consensus 158 -------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~sl 194 (282)
T cd06643 158 -------------------------------------------QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSL 194 (282)
T ss_pred -------------------------------------------cccccccccccccCHhhccccCCCCCCCCccchhhhH
Confidence 0011346899999999984 3557889999999
Q ss_pred hHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCC
Q 012988 322 GAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 322 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
||++|+|++|.+||...+.......+.... ....+.+..++.++++||.+||. ||.+|| ++.++++||||...
T Consensus 195 Gvil~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~il~~~~~~~~ 268 (282)
T cd06643 195 GITLIEMAQIEPPHHELNPMRVLLKIAKSE-PPTLAQPSRWSSEFKDFLKKCLEKNVDARW---TTTQLLQHPFVTVN 268 (282)
T ss_pred HHHHHHHccCCCCccccCHHHHHHHHhhcC-CCCCCCccccCHHHHHHHHHHccCChhhCc---CHHHHhcCCCEecc
Confidence 999999999999998877766666654422 11223334678999999999998 999999 99999999999853
No 157
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=8.4e-44 Score=344.32 Aligned_cols=256 Identities=32% Similarity=0.541 Sum_probs=219.3
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
..+|++++.||.|+||.||+|.+..+|+.||+|.+.... ......+.+|+.+++.++||||+++++++...+.+|+|
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 94 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK---QPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVV 94 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc---CchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEE
Confidence 367999999999999999999999999999999986542 23346688899999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 165 MEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
+||+++++|..++.. ..+++..+..++.|++.||.|||+.||+||||||+||+++.+|.++|+|||++..+....
T Consensus 95 ~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~---- 169 (296)
T cd06655 95 MEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ---- 169 (296)
T ss_pred EEecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhccccc----
Confidence 999999999998854 468999999999999999999999999999999999999999999999999987543110
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHH
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 324 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvi 324 (452)
.......|++.|+|||.+.+..++.++|||||||+
T Consensus 170 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvi 204 (296)
T cd06655 170 ---------------------------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM 204 (296)
T ss_pred ---------------------------------------------ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHH
Confidence 00113468899999999998889999999999999
Q ss_pred HHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 325 MYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 325 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
+|+|++|..||.+.+.......+... ..........+++.+.+||.+||. ||.+|| ++.+++.||||+.
T Consensus 205 l~~lltg~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp---t~~~il~~~~~~~ 274 (296)
T cd06655 205 AIEMVEGEPPYLNENPLRALYLIATN-GTPELQNPEKLSPIFRDFLNRCLEMDVEKRG---SAKELLQHPFLKL 274 (296)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhc-CCcccCCcccCCHHHHHHHHHHhhcChhhCC---CHHHHhhChHhhh
Confidence 99999999999988776655554432 122222334688999999999999 999999 9999999999985
No 158
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.1e-44 Score=347.82 Aligned_cols=255 Identities=29% Similarity=0.501 Sum_probs=207.1
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
+|++++.||.|+||.||+|.++.+|..||+|++..... .......+.+|+.+++.++||||+++++++.+...+|+|+|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence 58999999999999999999999999999999875432 22233457789999999999999999999999999999999
Q ss_pred ecCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 167 YLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 167 ~~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
|++ ++|.+++.. .+.+++..++.++.||+.||.|||+.||+||||||+||+++.++.+||+|||+++.+....
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~----- 153 (284)
T cd07839 80 YCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV----- 153 (284)
T ss_pred cCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC-----
Confidence 996 578887755 5679999999999999999999999999999999999999999999999999987543110
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC-CCCccchhhhhhHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK-GYGMECDWWSLGAI 324 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~-~~~~~~DiwSlGvi 324 (452)
.......+++.|+|||++.+. .++.++|||||||+
T Consensus 154 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~i 189 (284)
T cd07839 154 --------------------------------------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCI 189 (284)
T ss_pred --------------------------------------------CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHH
Confidence 001123578899999998764 47899999999999
Q ss_pred HHHhhhCCCCCC-CCChHHHHHHHhhccC---------------cccCC----------CCCCCChhHHHHHHHhhc-Cc
Q 012988 325 MYEMLVGYPPFY-ADDPITTCRKIVHWRN---------------HLKFP----------DDSKLSPEAKDLICRLLC-DV 377 (452)
Q Consensus 325 l~elltG~~Pf~-~~~~~~~~~~i~~~~~---------------~~~~p----------~~~~~s~~~~dLi~~mL~-dp 377 (452)
+|+|++|..||. +.+....+..+..... ...++ ....+++++++||.+||. ||
T Consensus 190 l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P 269 (284)
T cd07839 190 FAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNP 269 (284)
T ss_pred HHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCCh
Confidence 999999988864 4444444443322100 00000 012478999999999999 99
Q ss_pred cccCCCCCHHHHhcCCCc
Q 012988 378 EHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 378 ~~R~~~~~~~eil~hp~f 395 (452)
.+|| ++.+++.||||
T Consensus 270 ~~R~---t~~~il~h~~f 284 (284)
T cd07839 270 VQRI---SAEEALQHPYF 284 (284)
T ss_pred hhcC---CHHHHhcCCCC
Confidence 9999 99999999998
No 159
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=4.9e-44 Score=344.44 Aligned_cols=264 Identities=19% Similarity=0.306 Sum_probs=216.2
Q ss_pred CCCCCCeeEeceeccCCCeEEEEEEEcc-----CCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEE
Q 012988 82 KICVDDFELLTIIGRGAFGEVRLCREKK-----SGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQ 156 (452)
Q Consensus 82 ~~~~~~y~i~~~LG~G~~g~V~~a~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~ 156 (452)
.+..++|++.+.||+|+||.||+|..+. .+..||+|.+..... ......+.+|+.+++.++||||+++++++.
T Consensus 2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 79 (288)
T cd05061 2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS--LRERIEFLNEASVMKGFTCHHVVRLLGVVS 79 (288)
T ss_pred cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC--HHHHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence 4567899999999999999999997653 345899998764421 222345778999999999999999999999
Q ss_pred cCCeEEEEEeecCCCChHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEE
Q 012988 157 DTEYLYLIMEYLPGGDMMTLLMRE----------DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMK 226 (452)
Q Consensus 157 ~~~~~~lV~E~~~ggsL~~~l~~~----------~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ik 226 (452)
+....|+||||+++|+|.+++... ...+...+..++.|++.||.|||++||+||||||+|||++.++.++
T Consensus 80 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 80 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEE
Confidence 999999999999999999999653 2345677888999999999999999999999999999999999999
Q ss_pred EeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchh
Q 012988 227 LSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEV 306 (452)
Q Consensus 227 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~ 306 (452)
|+|||+++........ .......++..|+|||.
T Consensus 160 L~Dfg~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~y~~pE~ 192 (288)
T cd05061 160 IGDFGMTRDIYETDYY-----------------------------------------------RKGGKGLLPVRWMAPES 192 (288)
T ss_pred ECcCCccccccccccc-----------------------------------------------cccCCCcccccccCHHH
Confidence 9999998864321100 00012245678999999
Q ss_pred ccCCCCCccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC
Q 012988 307 LLKKGYGMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG 384 (452)
Q Consensus 307 ~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~ 384 (452)
+.+..++.++|+|||||++|||++ |..||.+.+..+....+... .....+ ..+++.++++|.+||+ ||.+||
T Consensus 193 ~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~li~~~l~~~p~~Rp--- 266 (288)
T cd05061 193 LKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG-GYLDQP--DNCPERVTDLMRMCWQFNPKMRP--- 266 (288)
T ss_pred hccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCCCC--CCCCHHHHHHHHHHcCCChhHCc---
Confidence 998899999999999999999998 79999888777766655432 222333 3568999999999999 999999
Q ss_pred CHHHHhc------CCCcCCCCc
Q 012988 385 GAHQIKA------HPWFKDVVW 400 (452)
Q Consensus 385 ~~~eil~------hp~f~~~~~ 400 (452)
++.++++ ||||++++|
T Consensus 267 s~~~ll~~l~~~~~~~~~~~~~ 288 (288)
T cd05061 267 TFLEIVNLLKDDLHPSFPEVSF 288 (288)
T ss_pred CHHHHHHHHHhhcCCCCCCCCC
Confidence 8888876 999999998
No 160
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=4.4e-44 Score=343.76 Aligned_cols=257 Identities=30% Similarity=0.473 Sum_probs=213.9
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++++.||+|+||.||+|.++.+|+.||+|++..... .....+.+.+|+.+++.++||||+++++++.....+++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED-DPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc-CccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence 479999999999999999999999999999999875432 2223355778999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
||++++.|..++.....+++..++.++.|++.||.|||+.||+||||||+||+++.+|.++|+|||++..+.....
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~---- 155 (286)
T cd07847 80 EYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD---- 155 (286)
T ss_pred eccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcc----
Confidence 9999998888877777899999999999999999999999999999999999999999999999999886532110
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchhhhhhHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAI 324 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~DiwSlGvi 324 (452)
......|+..|+|||++.+ ..++.++||||||++
T Consensus 156 ---------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i 190 (286)
T cd07847 156 ---------------------------------------------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCV 190 (286)
T ss_pred ---------------------------------------------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHH
Confidence 0112357889999999876 557899999999999
Q ss_pred HHHhhhCCCCCCCCChHHHHHHHhhccC-----------------cccCCC----------CCCCChhHHHHHHHhhc-C
Q 012988 325 MYEMLVGYPPFYADDPITTCRKIVHWRN-----------------HLKFPD----------DSKLSPEAKDLICRLLC-D 376 (452)
Q Consensus 325 l~elltG~~Pf~~~~~~~~~~~i~~~~~-----------------~~~~p~----------~~~~s~~~~dLi~~mL~-d 376 (452)
+|+|++|..||.+.+..+....+..... ....|. ...++..+.+||.+||. |
T Consensus 191 ~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 270 (286)
T cd07847 191 FAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMD 270 (286)
T ss_pred HHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCC
Confidence 9999999999988776555444332110 011111 12467889999999999 9
Q ss_pred ccccCCCCCHHHHhcCCCc
Q 012988 377 VEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 377 p~~R~~~~~~~eil~hp~f 395 (452)
|.+|| ++.+++.||||
T Consensus 271 p~~Rp---~~~eil~~~~f 286 (286)
T cd07847 271 PTERL---SCEELLEHPYF 286 (286)
T ss_pred ccccC---CHHHHhcCCCC
Confidence 99999 99999999998
No 161
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=3.2e-44 Score=342.08 Aligned_cols=249 Identities=31% Similarity=0.544 Sum_probs=202.2
Q ss_pred CCeeEecee--ccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEEcCCeEE
Q 012988 86 DDFELLTII--GRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQDTEYLY 162 (452)
Q Consensus 86 ~~y~i~~~L--G~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~~~~ 162 (452)
++|++.+.+ |.|+||.||++..+.++..+|+|++.+..... .|+.+...+ +||||++++++|...+.+|
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 85 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYSVTTLKGHV 85 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEEEecCCeeE
Confidence 456666665 99999999999999999999999987543211 122222222 7999999999999999999
Q ss_pred EEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCC-cEEEeeccCCccCCCCcc
Q 012988 163 LIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNG-HMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 163 lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g-~ikl~DFGla~~~~~~~~ 241 (452)
+||||+++|+|.+++..+..+++..+..++.|++.||.|||+.||+||||||+||+++.++ .++|+|||++......
T Consensus 86 iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~-- 163 (267)
T PHA03390 86 LIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP-- 163 (267)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC--
Confidence 9999999999999998878999999999999999999999999999999999999999998 9999999998754311
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSL 321 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSl 321 (452)
....|+..|+|||++.+..++.++|||||
T Consensus 164 ---------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~Dvwsl 192 (267)
T PHA03390 164 ---------------------------------------------------SCYDGTLDYFSPEKIKGHNYDVSFDWWAV 192 (267)
T ss_pred ---------------------------------------------------ccCCCCCcccChhhhcCCCCCchhhHHHH
Confidence 12358899999999999899999999999
Q ss_pred hHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 322 GAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 322 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
|+++|+|++|..||.....................+....+++.+.+||.+||+ ||.+|++ +++++++||||++
T Consensus 193 G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~--~~~~~l~h~~~~~ 267 (267)
T PHA03390 193 GVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLT--NYNEIIKHPFLKI 267 (267)
T ss_pred HHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCc--hHHHHhcCCcccC
Confidence 999999999999998654332211111111111222333689999999999999 9999992 2699999999974
No 162
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.5e-44 Score=347.38 Aligned_cols=255 Identities=29% Similarity=0.512 Sum_probs=212.6
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++++.||+|+||.||+|.+..++..||+|.+.... .......+.+|+.+++.++||||+++++++...+.+|+||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL--DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEE
Confidence 47999999999999999999999999999999886431 2223466888999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 166 EYLPGGDMMTLLMRE---DTLTENVARFYIAQSVLAIESIHK-HNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 166 E~~~ggsL~~~l~~~---~~~~~~~~~~~~~ql~~aL~~LH~-~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
||+++++|..++... ..+++..+..++.|++.||.|||+ .||+||||||+|||++.++.++|+|||++..+...
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 156 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS-- 156 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC--
Confidence 999999999888663 378999999999999999999997 59999999999999999999999999998754211
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC------CCCcc
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK------GYGME 315 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~------~~~~~ 315 (452)
......|++.|+|||++.+. .++.+
T Consensus 157 -------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~ 187 (286)
T cd06622 157 -------------------------------------------------LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQ 187 (286)
T ss_pred -------------------------------------------------ccccCCCccCccCcchhcCCCCCccCCCCcc
Confidence 01134588899999998643 35889
Q ss_pred chhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhc--cCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcC
Q 012988 316 CDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHW--RNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAH 392 (452)
Q Consensus 316 ~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~--~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~h 392 (452)
+|||||||++|+|++|..||...........+... ......| ..++.++.+||.+||. +|.+|| ++.+++.|
T Consensus 188 ~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rp---~~~~l~~~ 262 (286)
T cd06622 188 SDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLP--SGYSDDAQDFVAKCLNKIPNRRP---TYAQLLEH 262 (286)
T ss_pred cchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCC--cccCHHHHHHHHHHcccCcccCC---CHHHHhcC
Confidence 99999999999999999999766554444333221 1222333 3588999999999999 999999 99999999
Q ss_pred CCcCCC
Q 012988 393 PWFKDV 398 (452)
Q Consensus 393 p~f~~~ 398 (452)
|||...
T Consensus 263 ~~~~~~ 268 (286)
T cd06622 263 PWLVKY 268 (286)
T ss_pred hhhhhc
Confidence 999753
No 163
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=3.3e-44 Score=342.18 Aligned_cols=253 Identities=30% Similarity=0.512 Sum_probs=210.4
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEEcC-----
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQDT----- 158 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~----- 158 (452)
.+.|++.+.||.|+||.||+|.+..++..||+|++.... .....+..|+.+++.+ +|+||++++++|...
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 457899999999999999999999999999999986542 2235678899999998 699999999998753
Q ss_pred -CeEEEEEeecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCcc
Q 012988 159 -EYLYLIMEYLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKP 235 (452)
Q Consensus 159 -~~~~lV~E~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~ 235 (452)
..+|+||||+++|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++..
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~ 160 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 160 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCcee
Confidence 4689999999999999998763 4689999999999999999999999999999999999999999999999999875
Q ss_pred CCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhcc-----CC
Q 012988 236 LDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLL-----KK 310 (452)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~-----~~ 310 (452)
..... .......|++.|+|||++. +.
T Consensus 161 ~~~~~-------------------------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~ 191 (272)
T cd06637 161 LDRTV-------------------------------------------------GRRNTFIGTPYWMAPEVIACDENPDA 191 (272)
T ss_pred ccccc-------------------------------------------------ccCCcccccccccCHhHhccccCcCC
Confidence 43110 0112356899999999986 34
Q ss_pred CCCccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHH
Q 012988 311 GYGMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQI 389 (452)
Q Consensus 311 ~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~ei 389 (452)
.++.++|||||||++|+|++|..||...........+.. ..........++.++.+||.+||. ||.+|| ++.++
T Consensus 192 ~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~~i 266 (272)
T cd06637 192 TYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR--NPAPRLKSKKWSKKFQSFIESCLVKNHSQRP---TTEQL 266 (272)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc--CCCCCCCCCCcCHHHHHHHHHHcCCChhhCC---CHHHH
Confidence 688899999999999999999999987665554443332 111222223578999999999999 999999 99999
Q ss_pred hcCCCc
Q 012988 390 KAHPWF 395 (452)
Q Consensus 390 l~hp~f 395 (452)
+.||||
T Consensus 267 l~~~~~ 272 (272)
T cd06637 267 MKHPFI 272 (272)
T ss_pred hhCCCC
Confidence 999998
No 164
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=8e-44 Score=336.17 Aligned_cols=253 Identities=34% Similarity=0.527 Sum_probs=218.5
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
+|.+.+.||+|+||.||+|.++.++..|++|.+...... ......+.+|+.+++.++||||+++++++.+.+..|+|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN-RREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC-HHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence 588999999999999999999999999999998754332 3345678889999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 167 YLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 167 ~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
|++|++|.+++... ..+++..+..++.|++.||.|||+.||+|+||||+||+++.++.++|+|||+++.+.....
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~--- 156 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN--- 156 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccc---
Confidence 99999999999764 5789999999999999999999999999999999999999999999999999886532110
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHH
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 324 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvi 324 (452)
......|++.|+|||++.+..++.++|+|||||+
T Consensus 157 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 190 (256)
T cd08529 157 ----------------------------------------------FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVV 190 (256)
T ss_pred ----------------------------------------------hhhccccCccccCHHHhcCCCCCCccchHHHHHH
Confidence 0113468899999999999999999999999999
Q ss_pred HHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 325 MYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 325 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
+|+|++|+.||...+.......+.... ...++ ..++.++.++|.+||+ +|++|| ++.+++.|||+
T Consensus 191 l~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~i~~~l~~~p~~Rp---~~~~ll~~~~~ 256 (256)
T cd08529 191 LYECCTGKHPFDANNQGALILKIIRGV-FPPVS--QMYSQQLAQLIDQCLTKDYRQRP---DTFQLLRNPSL 256 (256)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHcCC-CCCCc--cccCHHHHHHHHHHccCCcccCc---CHHHHhhCCCC
Confidence 999999999998888766666665421 11222 2678999999999999 999999 99999999995
No 165
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=5.6e-44 Score=339.20 Aligned_cols=259 Identities=29% Similarity=0.482 Sum_probs=219.2
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++++.||.|+||+||+|....++..+|+|++....... ....+.+|+.+++.++|+||+++++.+...+.+|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT--SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch--HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence 47999999999999999999998899999999987543322 5577899999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcch
Q 012988 166 EYLPGGDMMTLLMRE---DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLY 242 (452)
Q Consensus 166 E~~~ggsL~~~l~~~---~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~ 242 (452)
|++++++|.+++... ..+++..++.++.|++.||.|||++||+||||+|+||++++++.++|+|||++..+......
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~ 158 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDR 158 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccc
Confidence 999999999999764 45899999999999999999999999999999999999999999999999998765321100
Q ss_pred hhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC-CCCccchhhhh
Q 012988 243 AIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK-GYGMECDWWSL 321 (452)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~-~~~~~~DiwSl 321 (452)
.........|+..|+|||++... .++.++|+|||
T Consensus 159 ---------------------------------------------~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~sl 193 (267)
T cd06610 159 ---------------------------------------------TRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSF 193 (267)
T ss_pred ---------------------------------------------cccccccccCChhhcChHHHccccCcCcccchHhH
Confidence 00011245689999999998876 78999999999
Q ss_pred hHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCC---CCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 322 GAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDD---SKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 322 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~---~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
||++|+|++|+.||...+....+..+.... ...++.. ..+++.+.+||.+||. ||.+|| ++.+++.||||
T Consensus 194 G~i~~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~ll~~p~~ 267 (267)
T cd06610 194 GITAIELATGAAPYSKYPPMKVLMLTLQND-PPSLETGADYKKYSKSFRKMISLCLQKDPSKRP---TAEELLKHKFF 267 (267)
T ss_pred hHHHHHHHhCCCCccccChhhhHHHHhcCC-CCCcCCccccccccHHHHHHHHHHcCCChhhCc---CHHHHhhCCCC
Confidence 999999999999998877766666555421 1222221 2578999999999999 999999 99999999998
No 166
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.5e-44 Score=352.99 Aligned_cols=264 Identities=21% Similarity=0.354 Sum_probs=207.8
Q ss_pred EeceeccC--CCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEee
Q 012988 90 LLTIIGRG--AFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEY 167 (452)
Q Consensus 90 i~~~LG~G--~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~ 167 (452)
++++||+| +||+||++.++.+|+.||+|++..... .......+.+|+.+++.++||||++++++|..++..|+||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-TNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhc-cHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence 57789999 789999999999999999999865432 233456678899999999999999999999999999999999
Q ss_pred cCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 168 LPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 168 ~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
+++|+|.+++... ..+++..++.++.|++.||.|||++||+||||||+|||++.++.++++|||.+..........
T Consensus 81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~-- 158 (327)
T cd08227 81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL-- 158 (327)
T ss_pred cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccc--
Confidence 9999999999653 468999999999999999999999999999999999999999999999998765432100000
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC--CCCCccchhhhhhH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK--KGYGMECDWWSLGA 323 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~--~~~~~~~DiwSlGv 323 (452)
.. .........++..|+|||++.+ ..++.++|||||||
T Consensus 159 --~~--------------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~ 198 (327)
T cd08227 159 --RV--------------------------------------VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGI 198 (327)
T ss_pred --cc--------------------------------------cccccccccceecccChHHhhcccCCCCchhhHHHHHH
Confidence 00 0000112357788999999976 46899999999999
Q ss_pred HHHHhhhCCCCCCCCChHHHHHHHhhccCcc------------------------------------------cCCCCCC
Q 012988 324 IMYEMLVGYPPFYADDPITTCRKIVHWRNHL------------------------------------------KFPDDSK 361 (452)
Q Consensus 324 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~------------------------------------------~~p~~~~ 361 (452)
++|+|++|..||................... ..+....
T Consensus 199 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (327)
T cd08227 199 TACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRT 278 (327)
T ss_pred HHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccc
Confidence 9999999999998655443332222110000 0001123
Q ss_pred CChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCCC
Q 012988 362 LSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDVV 399 (452)
Q Consensus 362 ~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~~ 399 (452)
+++++.+||.+||+ ||.+|| ++.++++||||+.+.
T Consensus 279 ~~~~~~~li~~~l~~dP~~Rp---t~~ell~~p~f~~~~ 314 (327)
T cd08227 279 FSPHFHHFVEQCLQRNPDARP---SASTLLNHSFFKQIK 314 (327)
T ss_pred cCHHHHHHHHHHHhhCchhcC---CHHHHhcChhhhhcc
Confidence 56789999999999 999999 999999999998653
No 167
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=6.8e-44 Score=340.20 Aligned_cols=259 Identities=29% Similarity=0.520 Sum_probs=215.6
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcc-------cchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVK-------RGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE 159 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~-------~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~ 159 (452)
+|.+.+.||.|+||.||+|.+..+|+.||+|.+....... ....+.+..|+.+++.++||||+++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4888999999999999999999999999999886432111 112456788999999999999999999999999
Q ss_pred eEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 160 YLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
.+++||||+++|+|.+++...+.+++..++.++.|++.||.|||+.|++||||+|+||+++.++.++|+|||+++.....
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 161 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDI 161 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccccc
Confidence 99999999999999999988888999999999999999999999999999999999999999999999999998754211
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCC--CCccch
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKG--YGMECD 317 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~--~~~~~D 317 (452)
. .........|+..|+|||++.... ++.++|
T Consensus 162 ~-----------------------------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~D 194 (272)
T cd06629 162 Y-----------------------------------------------DNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVD 194 (272)
T ss_pred c-----------------------------------------------cccccccccCCccccCHHHhccccCCCCccch
Confidence 0 000112345889999999988654 789999
Q ss_pred hhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCC--CCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCC
Q 012988 318 WWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDD--SKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPW 394 (452)
Q Consensus 318 iwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~--~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~ 394 (452)
+||||+++|+|++|..||...+.......+........++.. ..++.++.+||.+||. +|..|| ++.++++|||
T Consensus 195 v~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~il~~~~ 271 (272)
T cd06629 195 IWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRP---TARELLQHPF 271 (272)
T ss_pred hHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCC---CHHHHhhCCC
Confidence 999999999999999999776665555444432233333332 2568999999999999 999999 9999999999
Q ss_pred c
Q 012988 395 F 395 (452)
Q Consensus 395 f 395 (452)
|
T Consensus 272 ~ 272 (272)
T cd06629 272 I 272 (272)
T ss_pred C
Confidence 7
No 168
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.1e-44 Score=364.87 Aligned_cols=253 Identities=25% Similarity=0.290 Sum_probs=204.6
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
...|.+.+.||+|+||.||+|.+..+++.||||.... ..+.+|+.+|+.++|+|||++++++...+..|+|
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv 238 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLV 238 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 4579999999999999999999999999999996422 2346799999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 165 MEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
||++ .++|..++... ..+++..++.++.|++.||.|||++||+||||||+||||+.++.+||+|||+++.+.....
T Consensus 239 ~e~~-~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~-- 315 (461)
T PHA03211 239 LPKY-RSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS-- 315 (461)
T ss_pred EEcc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccc--
Confidence 9999 57888888654 5799999999999999999999999999999999999999999999999999876531100
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhH
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 323 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGv 323 (452)
.......+||+.|+|||++.+..++.++|||||||
T Consensus 316 ---------------------------------------------~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGv 350 (461)
T PHA03211 316 ---------------------------------------------TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGL 350 (461)
T ss_pred ---------------------------------------------cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHH
Confidence 00112357999999999999999999999999999
Q ss_pred HHHHhhhCCCCCCCCCh-------HHHHHHHhhccC-c-ccCC-----------------------------CCCCCChh
Q 012988 324 IMYEMLVGYPPFYADDP-------ITTCRKIVHWRN-H-LKFP-----------------------------DDSKLSPE 365 (452)
Q Consensus 324 il~elltG~~Pf~~~~~-------~~~~~~i~~~~~-~-~~~p-----------------------------~~~~~s~~ 365 (452)
+||||++|..|+..... ...+.+++.... . ..++ ....++.+
T Consensus 351 iL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (461)
T PHA03211 351 VIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLD 430 (461)
T ss_pred HHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccch
Confidence 99999998876543211 112222222100 0 0010 01135678
Q ss_pred HHHHHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 366 AKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 366 ~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
+.+||.+||. ||.+|| ++.|+|+||||+.
T Consensus 431 ~~dli~~mL~~DP~~RP---sa~elL~hp~f~~ 460 (461)
T PHA03211 431 VEYLVCRALTFDGARRP---SAAELLRLPLFQS 460 (461)
T ss_pred HHHHHHHHcccChhhCc---CHHHHhhCcccCC
Confidence 9999999999 999999 9999999999974
No 169
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=4.3e-44 Score=342.09 Aligned_cols=257 Identities=33% Similarity=0.546 Sum_probs=220.0
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++++.||.|+||.||+|.+..++..||+|++.... .......+.+|+.+++.++|+||+++++++.+...+|+|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEE
Confidence 47899999999999999999999999999999987543 2334566788999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
||+++++|.+++... .+++..+..++.|++.||.|||+.||+||||+|+||++++++.++|+|||+++.+....
T Consensus 79 e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~----- 152 (274)
T cd06609 79 EYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM----- 152 (274)
T ss_pred EeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccc-----
Confidence 999999999998665 88999999999999999999999999999999999999999999999999988664210
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 325 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil 325 (452)
.......|++.|+|||++.+..++.++|||||||++
T Consensus 153 --------------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il 188 (274)
T cd06609 153 --------------------------------------------SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITA 188 (274)
T ss_pred --------------------------------------------cccccccCCccccChhhhccCCCCchhhHHHHHHHH
Confidence 001234688999999999988899999999999999
Q ss_pred HHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCCC
Q 012988 326 YEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDVV 399 (452)
Q Consensus 326 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~~ 399 (452)
|+|++|..||...+.......+... .....+. ..++.++.++|.+||. +|.+|| ++.++++||||.+..
T Consensus 189 ~~l~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~l~~~l~~~p~~Rp---t~~~il~~~~~~~~~ 258 (274)
T cd06609 189 IELAKGEPPLSDLHPMRVLFLIPKN-NPPSLEG-NKFSKPFKDFVSLCLNKDPKERP---SAKELLKHKFIKKAK 258 (274)
T ss_pred HHHHhCCCCcccCchHHHHHHhhhc-CCCCCcc-cccCHHHHHHHHHHhhCChhhCc---CHHHHhhChhhcCCC
Confidence 9999999999887766555554432 1222222 1278999999999998 999999 999999999998754
No 170
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7.4e-44 Score=344.72 Aligned_cols=257 Identities=30% Similarity=0.509 Sum_probs=217.7
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEE
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYL 163 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~l 163 (452)
...+|++++.||+|+||.||+|.+..++..||+|.+..... .....+.+|+.+++.+.|+||+++++.|......|+
T Consensus 18 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~l 94 (296)
T cd06654 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 94 (296)
T ss_pred cccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEE
Confidence 34689999999999999999999999999999999875432 234668889999999999999999999999999999
Q ss_pred EEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 164 IMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 164 V~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
||||+++++|.+++.. ..+++..+..++.|++.||.|||+.||+||||||+|||++.++.++|+|||++.......
T Consensus 95 v~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~--- 170 (296)
T cd06654 95 VMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--- 170 (296)
T ss_pred eecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccc---
Confidence 9999999999998854 568999999999999999999999999999999999999999999999999987542110
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhH
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 323 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGv 323 (452)
.......|++.|+|||.+.+..++.++|||||||
T Consensus 171 ----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gv 204 (296)
T cd06654 171 ----------------------------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204 (296)
T ss_pred ----------------------------------------------cccCcccCCccccCHHHHcCCCCCccchHHHHHH
Confidence 0011346889999999999888999999999999
Q ss_pred HHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 324 IMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 324 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
++|+|++|+.||...+.......+... .....+....++..+.+||.+||. ||.+|| ++.+++.||||..
T Consensus 205 il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp---t~~eil~~~~~~~ 275 (296)
T cd06654 205 MAIEMIEGEPPYLNENPLRALYLIATN-GTPELQNPEKLSAIFRDFLNRCLDMDVEKRG---SAKELLQHQFLKI 275 (296)
T ss_pred HHHHHHhCCCCCCCCCHHHhHHHHhcC-CCCCCCCccccCHHHHHHHHHHCcCCcccCc---CHHHHhhChhhhc
Confidence 999999999999887765544433321 122222234688999999999999 999999 9999999999974
No 171
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=7e-44 Score=338.79 Aligned_cols=260 Identities=30% Similarity=0.491 Sum_probs=215.7
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchh---cccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEE
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEM---VKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYL 163 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~l 163 (452)
+|++.+.||+|+||+||+|.. .++..+|+|.+..... ........+.+|+.+++.++|+||+++++++.+.+.+|+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI 79 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence 588899999999999999976 5788999998864321 122334668899999999999999999999999999999
Q ss_pred EEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 164 IMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 164 V~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
||||+++++|.+++.+...+++..+..++.|++.||.|||+.||+|+||+|+||++++++.++|+|||++..........
T Consensus 80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 159 (265)
T cd06631 80 FMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHG 159 (265)
T ss_pred EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccc
Confidence 99999999999999887889999999999999999999999999999999999999999999999999987542110000
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhH
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 323 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGv 323 (452)
. .........|+..|+|||++.+..++.++|+|||||
T Consensus 160 ~-------------------------------------------~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~ 196 (265)
T cd06631 160 T-------------------------------------------HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGC 196 (265)
T ss_pred c-------------------------------------------ccccccccCCCccccChhhhcCCCCcchhhHHHHHH
Confidence 0 000112346899999999999988999999999999
Q ss_pred HHHHhhhCCCCCCCCChHHHHHHHhhccCc-ccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 324 IMYEMLVGYPPFYADDPITTCRKIVHWRNH-LKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 324 il~elltG~~Pf~~~~~~~~~~~i~~~~~~-~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
++|+|++|..||...+.......+...... ...+ ..++.++.+||.+||. +|.+|| ++.+++.||||
T Consensus 197 ~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~p~~Rp---~~~~~l~~~~~ 265 (265)
T cd06631 197 TVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLP--DSFSAAAIDFVTSCLTRDQHERP---SALQLLRHDFL 265 (265)
T ss_pred HHHHHHhCCCccccCChHHHHHHhhhccCCCCCCC--CCCCHHHHHHHHHHhcCCcccCC---CHHHHhcCCCC
Confidence 999999999999877665554444432111 1222 3688999999999998 999999 99999999998
No 172
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-46 Score=360.42 Aligned_cols=246 Identities=26% Similarity=0.369 Sum_probs=214.3
Q ss_pred cCCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC
Q 012988 80 RHKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE 159 (452)
Q Consensus 80 ~~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~ 159 (452)
.+++..+...-+.-||.|+-|.||+++.. ++.||||+++.- -..++.=|+.|+||||+.+.++|....
T Consensus 118 ~WeiPFe~IsELeWlGSGaQGAVF~Grl~--netVAVKKV~el----------kETdIKHLRkLkH~NII~FkGVCtqsP 185 (904)
T KOG4721|consen 118 LWEIPFEEISELEWLGSGAQGAVFLGRLH--NETVAVKKVREL----------KETDIKHLRKLKHPNIITFKGVCTQSP 185 (904)
T ss_pred hccCCHHHhhhhhhhccCcccceeeeecc--CceehhHHHhhh----------hhhhHHHHHhccCcceeeEeeeecCCc
Confidence 35566666666788999999999999865 789999987422 224667789999999999999999999
Q ss_pred eEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 160 YLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
.+|||||||+.|-|..+|+....++......|..+|+.|++|||.+.|||||||.-||||..+..|||+|||-++.+..
T Consensus 186 cyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~- 264 (904)
T KOG4721|consen 186 CYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSD- 264 (904)
T ss_pred eeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhh-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999886531
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhh
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWW 319 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Diw 319 (452)
.....+++||..|||||++.+.+.+.++|||
T Consensus 265 -------------------------------------------------~STkMSFaGTVaWMAPEvIrnePcsEKVDIw 295 (904)
T KOG4721|consen 265 -------------------------------------------------KSTKMSFAGTVAWMAPEVIRNEPCSEKVDIW 295 (904)
T ss_pred -------------------------------------------------hhhhhhhhhhHhhhCHHHhhcCCccccccee
Confidence 1223468999999999999999999999999
Q ss_pred hhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcC
Q 012988 320 SLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAH 392 (452)
Q Consensus 320 SlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~h 392 (452)
||||+|||||||..||..-+...++.-+- ...+.+|-+..+++.++-||++|+. .|..|| ++.+|+.|
T Consensus 296 SfGVVLWEmLT~EiPYkdVdssAIIwGVG--sNsL~LpvPstcP~GfklL~Kqcw~sKpRNRP---SFrqil~H 364 (904)
T KOG4721|consen 296 SFGVVLWEMLTGEIPYKDVDSSAIIWGVG--SNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRP---SFRQILLH 364 (904)
T ss_pred hhHHHHHHHHhcCCCccccchheeEEecc--CCcccccCcccCchHHHHHHHHHHhcCCCCCc---cHHHHHHH
Confidence 99999999999999998776654443332 2456666667899999999999998 999999 99999998
No 173
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.7e-44 Score=345.65 Aligned_cols=256 Identities=30% Similarity=0.522 Sum_probs=216.1
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
..+|++++.||+|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.+++.++|+||++++++|...+.+|+|
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 94 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 94 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc---chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEe
Confidence 3789999999999999999999999999999999865432 2345678899999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 165 MEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
|||+++++|.+++.+ ..+++..+..++.|++.||.|||+.||+||||||+|||++.+|.++|+|||++.......
T Consensus 95 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~---- 169 (297)
T cd06656 95 MEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---- 169 (297)
T ss_pred ecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc----
Confidence 999999999999854 568999999999999999999999999999999999999999999999999987542110
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHH
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 324 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvi 324 (452)
.......|++.|+|||.+.+..++.++|+|||||+
T Consensus 170 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvi 204 (297)
T cd06656 170 ---------------------------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM 204 (297)
T ss_pred ---------------------------------------------cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHH
Confidence 00113458899999999999889999999999999
Q ss_pred HHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 325 MYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 325 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
+|+|++|..||.+.+.......+... ..........++..+++||.+||. ||.+|| ++.+++.||||+.
T Consensus 205 l~~l~tg~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~il~~~~~~~ 274 (297)
T cd06656 205 AIEMVEGEPPYLNENPLRALYLIATN-GTPELQNPERLSAVFRDFLNRCLEMDVDRRG---SAKELLQHPFLKL 274 (297)
T ss_pred HHHHHhCCCCCCCCCcchheeeeccC-CCCCCCCccccCHHHHHHHHHHccCChhhCc---CHHHHhcCchhcc
Confidence 99999999999877654433322221 122222233678999999999999 999999 9999999999974
No 174
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=3.2e-44 Score=358.31 Aligned_cols=258 Identities=22% Similarity=0.302 Sum_probs=209.0
Q ss_pred cCCCCCCCeeEeceeccCCCeEEEEEEEccC-----CCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEE
Q 012988 80 RHKICVDDFELLTIIGRGAFGEVRLCREKKS-----GNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYY 153 (452)
Q Consensus 80 ~~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~ 153 (452)
.+.+..++|++.+.||+|+||.||+|.+..+ +..||+|++..... ......+.+|+.+++.+ +|+||+++++
T Consensus 32 ~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~il~~l~~h~nIv~~~~ 109 (374)
T cd05106 32 KWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH--TDEREALMSELKILSHLGQHKNIVNLLG 109 (374)
T ss_pred cccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC--HHHHHHHHHHHHHHHhhccCCceeeEee
Confidence 3455667899999999999999999986544 35799999875432 22356688999999999 8999999999
Q ss_pred EEEcCCeEEEEEeecCCCChHHHHHhc-----------------------------------------------------
Q 012988 154 SFQDTEYLYLIMEYLPGGDMMTLLMRE----------------------------------------------------- 180 (452)
Q Consensus 154 ~~~~~~~~~lV~E~~~ggsL~~~l~~~----------------------------------------------------- 180 (452)
++...+.+|+||||+++|+|.+++...
T Consensus 110 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (374)
T cd05106 110 ACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSS 189 (374)
T ss_pred EecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccc
Confidence 999999999999999999999998542
Q ss_pred -----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 181 -----------------DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 181 -----------------~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~-- 267 (374)
T cd05106 190 SSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN-- 267 (374)
T ss_pred cccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc--
Confidence 2467888999999999999999999999999999999999999999999999876532110
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhH
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 323 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGv 323 (452)
........+++.|+|||++.+..++.++|||||||
T Consensus 268 ---------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGv 302 (374)
T cd05106 268 ---------------------------------------------YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 302 (374)
T ss_pred ---------------------------------------------eeeccCCCCccceeCHHHhcCCCCCccccHHHHHH
Confidence 00011223567899999999999999999999999
Q ss_pred HHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 324 IMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 324 il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
++|+|++ |..||........+..+.........| ..+++++.++|.+||+ ||.+|| ++.+|++
T Consensus 303 il~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dp~~RP---s~~~l~~ 367 (374)
T cd05106 303 LLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRP--DFAPPEIYSIMKMCWNLEPTERP---TFSQISQ 367 (374)
T ss_pred HHHHHHhCCCCCCccccccHHHHHHHHcccCccCC--CCCCHHHHHHHHHHcCCChhhCc---CHHHHHH
Confidence 9999997 999998765544444444432222333 3578999999999999 999999 8888764
No 175
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=6.5e-44 Score=339.28 Aligned_cols=260 Identities=28% Similarity=0.478 Sum_probs=214.9
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcc---cchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEE
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVK---RGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYL 163 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~l 163 (452)
+|+..+.||+|+||.||+|.+..+++.||+|++....... ......+.+|+.+++.++|+||+++++++.+.+.+++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 4888999999999999999999999999999987543211 1234678899999999999999999999999999999
Q ss_pred EEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCC-cEEEeeccCCccCCCCcch
Q 012988 164 IMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNG-HMKLSDFGLCKPLDCSTLY 242 (452)
Q Consensus 164 V~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g-~ikl~DFGla~~~~~~~~~ 242 (452)
||||+++++|.+++...+.+++..+..++.|++.||.|||++|++|+||+|+||+++.++ .++|+|||++..+......
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 160 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTG 160 (268)
T ss_pred EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccccc
Confidence 999999999999998888899999999999999999999999999999999999998876 5999999998765321000
Q ss_pred hhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhh
Q 012988 243 AIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLG 322 (452)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlG 322 (452)
.........||..|+|||++.+..++.++|+||||
T Consensus 161 ---------------------------------------------~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG 195 (268)
T cd06630 161 ---------------------------------------------AGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVG 195 (268)
T ss_pred ---------------------------------------------CCccccccccccceeCHhHhccCCCCcccchHHHH
Confidence 00001134689999999999888899999999999
Q ss_pred HHHHHhhhCCCCCCCCChHHHHHHHhh---ccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcC
Q 012988 323 AIMYEMLVGYPPFYADDPITTCRKIVH---WRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFK 396 (452)
Q Consensus 323 vil~elltG~~Pf~~~~~~~~~~~i~~---~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~ 396 (452)
+++|+|++|..||...+.......+.. ......+| ..+++++.++|.+||. +|.+|| ++.++++||||+
T Consensus 196 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~p~~R~---~~~~ll~~~~~~ 268 (268)
T cd06630 196 CVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIP--EHLSPGLRDVTLRCLELQPEDRP---PSRELLKHPVFR 268 (268)
T ss_pred HHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCc--hhhCHHHHHHHHHHcCCCcccCc---CHHHHhcCcccC
Confidence 999999999999975543332222221 11222233 3578999999999998 999999 999999999995
No 176
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.2e-44 Score=373.94 Aligned_cols=286 Identities=26% Similarity=0.359 Sum_probs=210.0
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEccCC-CEEEEEE--------------eecchhcccchHHHHHHHHHHHHHhCCCc
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREKKSG-NIYAMKK--------------LKKSEMVKRGQVEHVRAERNLLAEVASHC 147 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~~~~-~~vavK~--------------~~~~~~~~~~~~~~~~~E~~il~~l~hp~ 147 (452)
...++|++++.||+|+||+||+|..+... ...+.|. +.+...........+.+|+.+|+.++|||
T Consensus 145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCC
Confidence 34578999999999999999998765432 2222221 11111111223456789999999999999
Q ss_pred eeeEEEEEEcCCeEEEEEeecCCCChHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCC
Q 012988 148 IVKLYYSFQDTEYLYLIMEYLPGGDMMTLLMRE-----DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKN 222 (452)
Q Consensus 148 iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~-----~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~ 222 (452)
|+++++++.+.+..|+|++++ +++|..++... .......++.++.||+.||.|||++|||||||||+|||++.+
T Consensus 225 Iv~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~ 303 (501)
T PHA03210 225 ILKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCD 303 (501)
T ss_pred cCcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC
Confidence 999999999999999999999 56777776442 223466788899999999999999999999999999999999
Q ss_pred CcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccc
Q 012988 223 GHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYI 302 (452)
Q Consensus 223 g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~ 302 (452)
|.+||+|||+++.+.... .......+||+.|+
T Consensus 304 ~~vkL~DFGla~~~~~~~------------------------------------------------~~~~~~~~gt~~y~ 335 (501)
T PHA03210 304 GKIVLGDFGTAMPFEKER------------------------------------------------EAFDYGWVGTVATN 335 (501)
T ss_pred CCEEEEeCCCceecCccc------------------------------------------------ccccccccCCcCCC
Confidence 999999999998653210 00112457999999
Q ss_pred cchhccCCCCCccchhhhhhHHHHHhhhCCCCCCC-C--ChHHHHHHHhhccC--cccCCC-------------------
Q 012988 303 APEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYA-D--DPITTCRKIVHWRN--HLKFPD------------------- 358 (452)
Q Consensus 303 APE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~-~--~~~~~~~~i~~~~~--~~~~p~------------------- 358 (452)
|||++.+..|+.++|||||||++|||++|..++.+ . .....+..+..... ...+|.
T Consensus 336 aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~ 415 (501)
T PHA03210 336 SPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGH 415 (501)
T ss_pred CchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCcc
Confidence 99999999999999999999999999998865432 2 22223332222100 001110
Q ss_pred -------CCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCCCcccccc---------CCCCccccCCCCccC
Q 012988 359 -------DSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDVVWDKLYE---------MEAAFKPEINGELDT 420 (452)
Q Consensus 359 -------~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~~~~~l~~---------~~~~~~p~~~~~~~~ 420 (452)
...++.++.++|.+||+ ||.+|| ++.|++.||||...+.+.... .-.++.|....+.|+
T Consensus 416 ~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rp---sa~elL~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (501)
T PHA03210 416 SVPPLIRNLGLPADFEYPLVKMLTFDWHLRP---GAAELLALPLFSAEEEEEILFIHGLKSGAAHFKPIKPACRIESDT 491 (501)
T ss_pred chhhHHHhcCCChHHHHHHHHHhccCcccCc---CHHHHhhChhhhcCCchHHHHHHhhhccccccccCCchheecccc
Confidence 11356778899999999 999999 999999999999877665531 234566666555554
No 177
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.2e-43 Score=335.03 Aligned_cols=253 Identities=32% Similarity=0.532 Sum_probs=216.6
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
.++|++.+.||.|+||.||+|.+..++..||+|.+..... ...+.+|+.+++.++||||+++++++.+...+|++
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-----~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~ 76 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-----LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIV 76 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-----HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEE
Confidence 3689999999999999999999998899999999865422 56788999999999999999999999999999999
Q ss_pred EeecCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 165 MEYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
+||+++++|.+++.. ...+++..++.++.|++.||.|||+.||+||||+|+||+++.++.++|+|||++.......
T Consensus 77 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~--- 153 (256)
T cd06612 77 MEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM--- 153 (256)
T ss_pred EecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCc---
Confidence 999999999999865 4578999999999999999999999999999999999999999999999999988653210
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhH
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 323 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGv 323 (452)
.......|+..|+|||++.+..++.++||||||+
T Consensus 154 ----------------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~ 187 (256)
T cd06612 154 ----------------------------------------------AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGI 187 (256)
T ss_pred ----------------------------------------------cccccccCCccccCHHHHhcCCCCchhhHHHHHH
Confidence 0011345888999999999989999999999999
Q ss_pred HHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 324 IMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 324 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
++|+|++|+.||...+.......+... ....+.....++.++.+||.+||. ||.+|| ++.+++.||||
T Consensus 188 il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp---s~~~il~~~~~ 256 (256)
T cd06612 188 TAIEMAEGKPPYSDIHPMRAIFMIPNK-PPPTLSDPEKWSPEFNDFVKKCLVKDPEERP---SAIQLLQHPFI 256 (256)
T ss_pred HHHHHHhCCCCCCCcchhhhhhhhccC-CCCCCCchhhcCHHHHHHHHHHHhcChhhCc---CHHHHhcCCCC
Confidence 999999999999877665544443321 111222223578899999999998 999999 99999999998
No 178
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=4.7e-44 Score=343.69 Aligned_cols=257 Identities=33% Similarity=0.531 Sum_probs=214.2
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++++.||+|+||.||+|.+..+++.||+|++.+..... ...+.+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK-MVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc-hhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence 47999999999999999999999999999999986543222 33456788999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
||+++++|..+......+++..+..++.|++.||.|||+.||+|+||+|+||++++++.++|+|||++..+....
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~----- 154 (286)
T cd07846 80 EFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG----- 154 (286)
T ss_pred ecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-----
Confidence 999999998887666679999999999999999999999999999999999999999999999999987653210
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchhhhhhHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAI 324 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~DiwSlGvi 324 (452)
.......|+..|+|||++.+ ..++.++||||||++
T Consensus 155 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~ 190 (286)
T cd07846 155 --------------------------------------------EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCL 190 (286)
T ss_pred --------------------------------------------cccCcccceeeccCcHHhccccccCchHhHHHHHHH
Confidence 00113458899999999875 457889999999999
Q ss_pred HHHhhhCCCCCCCCChHHHHHHHhhccCcc-----------------cCCC----------CCCCChhHHHHHHHhhc-C
Q 012988 325 MYEMLVGYPPFYADDPITTCRKIVHWRNHL-----------------KFPD----------DSKLSPEAKDLICRLLC-D 376 (452)
Q Consensus 325 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~-----------------~~p~----------~~~~s~~~~dLi~~mL~-d 376 (452)
+|+|++|.+||...+..+....+......+ ..+. ...++..+.+||.+||. +
T Consensus 191 l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 270 (286)
T cd07846 191 VTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRID 270 (286)
T ss_pred HHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCC
Confidence 999999999998776655444443321111 1111 13568899999999998 9
Q ss_pred ccccCCCCCHHHHhcCCCc
Q 012988 377 VEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 377 p~~R~~~~~~~eil~hp~f 395 (452)
|.+|| ++.+++.||||
T Consensus 271 P~~Rp---~~~~il~~~~~ 286 (286)
T cd07846 271 PDDRP---SSSQLLHHEFF 286 (286)
T ss_pred cccch---hHHHHhcCCCC
Confidence 99999 99999999998
No 179
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.1e-43 Score=352.21 Aligned_cols=255 Identities=29% Similarity=0.472 Sum_probs=209.6
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC------
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT------ 158 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~------ 158 (452)
.++|++++.||+|+||+||+|.+..+|..||+|++.+.. ........+.+|+.+++.++||||++++++|...
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPF-QNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccc-cChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 478999999999999999999999999999999986532 1223345677899999999999999999998644
Q ss_pred CeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCC
Q 012988 159 EYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDC 238 (452)
Q Consensus 159 ~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~ 238 (452)
...|+||||+. ++|...+... +++..+..++.|++.||.|||++||+||||||+|||++.+|.+||+|||+++....
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 170 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 170 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCC
Confidence 35799999995 5888887544 89999999999999999999999999999999999999999999999999876531
Q ss_pred CcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchh
Q 012988 239 STLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDW 318 (452)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Di 318 (452)
.. ......||+.|+|||++.+..++.++||
T Consensus 171 ~~--------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 200 (353)
T cd07850 171 SF--------------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDI 200 (353)
T ss_pred CC--------------------------------------------------CCCCCcccccccCHHHHhCCCCCCchhh
Confidence 10 0113468899999999999999999999
Q ss_pred hhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcc----------------------------------cCCC-----C
Q 012988 319 WSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHL----------------------------------KFPD-----D 359 (452)
Q Consensus 319 wSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~----------------------------------~~p~-----~ 359 (452)
|||||++|+|++|+.||...+....+..+....... .++. .
T Consensus 201 wslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (353)
T cd07850 201 WSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHN 280 (353)
T ss_pred HhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCccccccc
Confidence 999999999999999998877655555443211000 0000 1
Q ss_pred CCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcC
Q 012988 360 SKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFK 396 (452)
Q Consensus 360 ~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~ 396 (452)
...++.+++||.+||+ ||.+|| ++.+++.||||+
T Consensus 281 ~~~~~~~~~li~~~L~~dP~~R~---t~~eiL~~~~~~ 315 (353)
T cd07850 281 KLKASQARDLLSKMLVIDPEKRI---SVDDALQHPYIN 315 (353)
T ss_pred ccchhHHHHHHHHHcCCChhhCc---CHHHHhcChhHh
Confidence 1245678999999999 999999 999999999998
No 180
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=2.3e-43 Score=334.28 Aligned_cols=255 Identities=31% Similarity=0.523 Sum_probs=216.4
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
.++|++.+.||.|+||.||+|.+..++..+|+|++..... .....+.+|+.+++.++||||+++++++.+.+.+|++
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~ 78 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG---DDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIV 78 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch---hhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEE
Confidence 3689999999999999999999999999999999875432 2456788999999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 165 MEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
|||+++++|.+++... ..+++..+..++.|++.||.|||++||+|+||+|+||+++.++.+||+|||++..+....
T Consensus 79 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--- 155 (262)
T cd06613 79 MEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI--- 155 (262)
T ss_pred EeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhh---
Confidence 9999999999998776 789999999999999999999999999999999999999999999999999987543110
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC---CCCccchhhh
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK---GYGMECDWWS 320 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~---~~~~~~DiwS 320 (452)
.......|+..|+|||++.+. .++.++|+||
T Consensus 156 ----------------------------------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~s 189 (262)
T cd06613 156 ----------------------------------------------AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWA 189 (262)
T ss_pred ----------------------------------------------hccccccCCccccCchhhcccccCCcCchhhhHH
Confidence 001134688899999999876 7899999999
Q ss_pred hhHHHHHhhhCCCCCCCCChHHHHHHHhhccCc-ccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCC
Q 012988 321 LGAIMYEMLVGYPPFYADDPITTCRKIVHWRNH-LKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPW 394 (452)
Q Consensus 321 lGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~-~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~ 394 (452)
|||++|+|++|..||...+.......+...... ........++.++.+||.+||. +|..|| ++.+|+.|+|
T Consensus 190 lG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~~il~~~~ 262 (262)
T cd06613 190 LGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRP---TATKLLQHPF 262 (262)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCC---CHHHHhcCCC
Confidence 999999999999999887766555444332111 1111123467889999999999 999999 9999999998
No 181
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=4.6e-43 Score=338.03 Aligned_cols=260 Identities=31% Similarity=0.522 Sum_probs=214.0
Q ss_pred cCCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEEcC
Q 012988 80 RHKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQDT 158 (452)
Q Consensus 80 ~~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~ 158 (452)
......++|++...||+|+||.||+|....+++.+|+|++.... .....+.+|+.+++.+ +|||++++++++...
T Consensus 16 ~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 16 SLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred cCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 33445689999999999999999999999999999999986532 2234567899999998 899999999998643
Q ss_pred -----CeEEEEEeecCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEee
Q 012988 159 -----EYLYLIMEYLPGGDMMTLLMR----EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSD 229 (452)
Q Consensus 159 -----~~~~lV~E~~~ggsL~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~D 229 (452)
+.+|+||||+++|+|.+++.. ...+++..++.++.|++.||.|||+.||+||||||+||+++.++.+||+|
T Consensus 92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~d 171 (291)
T cd06639 92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVD 171 (291)
T ss_pred cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEee
Confidence 468999999999999998753 45789999999999999999999999999999999999999999999999
Q ss_pred ccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC
Q 012988 230 FGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK 309 (452)
Q Consensus 230 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~ 309 (452)
||++..+..... ......|+..|+|||++..
T Consensus 172 fg~~~~~~~~~~-------------------------------------------------~~~~~~~~~~y~aPE~~~~ 202 (291)
T cd06639 172 FGVSAQLTSTRL-------------------------------------------------RRNTSVGTPFWMAPEVIAC 202 (291)
T ss_pred cccchhcccccc-------------------------------------------------cccCccCCccccChhhhcC
Confidence 999876531100 0113468899999999864
Q ss_pred C-----CCCccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCC
Q 012988 310 K-----GYGMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGT 383 (452)
Q Consensus 310 ~-----~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~ 383 (452)
. .++.++|||||||++|+|++|++||...+.......+... ....+.....++..+.+||.+||. +|.+||
T Consensus 203 ~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp-- 279 (291)
T cd06639 203 EQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRN-PPPTLLHPEKWCRSFNHFISQCLIKDFEARP-- 279 (291)
T ss_pred CCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcC-CCCCCCcccccCHHHHHHHHHHhhcChhhCc--
Confidence 3 3688999999999999999999999887766665555432 122222223567889999999998 999999
Q ss_pred CCHHHHhcCCCcC
Q 012988 384 GGAHQIKAHPWFK 396 (452)
Q Consensus 384 ~~~~eil~hp~f~ 396 (452)
++.+++.||||+
T Consensus 280 -s~~~il~~~~~~ 291 (291)
T cd06639 280 -SVTHLLEHPFIK 291 (291)
T ss_pred -CHHHHhcCcccC
Confidence 999999999995
No 182
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=2.3e-43 Score=343.21 Aligned_cols=260 Identities=30% Similarity=0.455 Sum_probs=214.1
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC--CeE
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT--EYL 161 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~--~~~ 161 (452)
..++|++++.||.|+||.||+|.++.+|..||+|++...... ......+.+|+.+++.++|+||+++++++.+. +.+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNER-DGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCC-CCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeE
Confidence 467899999999999999999999999999999998654321 22223456799999999999999999999765 578
Q ss_pred EEEEeecCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCc
Q 012988 162 YLIMEYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCST 240 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~ 240 (452)
|+||||+. ++|.+++.. ...+++..+..++.|++.||.|||+.||+||||||+||+++.++.+||+|||++.......
T Consensus 84 ~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~ 162 (309)
T cd07845 84 FLVMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA 162 (309)
T ss_pred EEEEecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCcc
Confidence 99999995 588888765 3678999999999999999999999999999999999999999999999999988653210
Q ss_pred chhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchhh
Q 012988 241 LYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDWW 319 (452)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~Diw 319 (452)
.......+++.|+|||++.+ ..++.++|||
T Consensus 163 -------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dvw 193 (309)
T cd07845 163 -------------------------------------------------KPMTPKVVTLWYRAPELLLGCTTYTTAIDMW 193 (309)
T ss_pred -------------------------------------------------CCCCcccccccccChhhhcCCCCcCchHHHH
Confidence 00112346788999999875 5679999999
Q ss_pred hhhHHHHHhhhCCCCCCCCChHHHHHHHhhccC-----------------cccCCCC---------CCCChhHHHHHHHh
Q 012988 320 SLGAIMYEMLVGYPPFYADDPITTCRKIVHWRN-----------------HLKFPDD---------SKLSPEAKDLICRL 373 (452)
Q Consensus 320 SlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~-----------------~~~~p~~---------~~~s~~~~dLi~~m 373 (452)
||||++|+|++|++||.+.+..+.+..+..... .+..+.. ..+++++.+||.+|
T Consensus 194 slG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~m 273 (309)
T cd07845 194 AVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFL 273 (309)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHH
Confidence 999999999999999998888877776654211 1111110 13588999999999
Q ss_pred hc-CccccCCCCCHHHHhcCCCcCC
Q 012988 374 LC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 374 L~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
|+ ||.+|| ++.+++.||||++
T Consensus 274 l~~dp~~R~---t~~~il~h~~f~~ 295 (309)
T cd07845 274 LMYDPKKRA---TAEEALESSYFKE 295 (309)
T ss_pred hcCChhhCc---CHHHHhcChhhcc
Confidence 99 999999 9999999999984
No 183
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.1e-43 Score=341.32 Aligned_cols=256 Identities=26% Similarity=0.423 Sum_probs=215.4
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEE
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYL 163 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~l 163 (452)
..++|++++.||+|+||+||+|.+..+|..||+|++.... .......+.+|+.+++.++||||+++++++.+...+|+
T Consensus 3 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 80 (284)
T cd06620 3 RNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICM 80 (284)
T ss_pred cHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEE
Confidence 3468999999999999999999999999999999886542 22335678899999999999999999999999999999
Q ss_pred EEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcch
Q 012988 164 IMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHK-HNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLY 242 (452)
Q Consensus 164 V~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~-~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~ 242 (452)
||||+++++|..++...+.+++..+..++.+++.||.|||+ .||+||||||+||+++.++.++|+|||++......
T Consensus 81 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~--- 157 (284)
T cd06620 81 CMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS--- 157 (284)
T ss_pred EEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh---
Confidence 99999999999999888889999999999999999999997 69999999999999999999999999997643210
Q ss_pred hhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhh
Q 012988 243 AIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLG 322 (452)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlG 322 (452)
.....+||..|+|||++.+..++.++||||||
T Consensus 158 ------------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG 189 (284)
T cd06620 158 ------------------------------------------------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLG 189 (284)
T ss_pred ------------------------------------------------ccCccccCcccCCHHHHccCCCCccchHHHHH
Confidence 01134689999999999888899999999999
Q ss_pred HHHHHhhhCCCCCCCCChH-----------HHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHh
Q 012988 323 AIMYEMLVGYPPFYADDPI-----------TTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIK 390 (452)
Q Consensus 323 vil~elltG~~Pf~~~~~~-----------~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil 390 (452)
|++|+|++|..||...... .....+... ....++. ..++.++.+||.+||. ||.+|| ++.+++
T Consensus 190 ~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~li~~~l~~dp~~Rp---t~~e~~ 264 (284)
T cd06620 190 ISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQE-PPPRLPS-SDFPEDLRDFVDACLLKDPTERP---TPQQLC 264 (284)
T ss_pred HHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhc-cCCCCCc-hhcCHHHHHHHHHHhcCCcccCc---CHHHHh
Confidence 9999999999999865442 222222221 1112222 2377899999999999 999999 999999
Q ss_pred cCCCcCC
Q 012988 391 AHPWFKD 397 (452)
Q Consensus 391 ~hp~f~~ 397 (452)
+||||..
T Consensus 265 ~~~~~~~ 271 (284)
T cd06620 265 AMPPFIQ 271 (284)
T ss_pred cCccccc
Confidence 9999963
No 184
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=3.2e-43 Score=333.57 Aligned_cols=260 Identities=33% Similarity=0.498 Sum_probs=219.5
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
+|++.+.||+|+||.||+|.+..++..||+|++...... ......+..|+.+++.++|+||+++++.+.+.+.+++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 589999999999999999999989999999998765432 3456789999999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcc
Q 012988 167 YLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHE 246 (452)
Q Consensus 167 ~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~ 246 (452)
|+++++|.+++.....+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.+||+|||++..........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~--- 156 (264)
T cd06626 80 YCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM--- 156 (264)
T ss_pred cCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc---
Confidence 99999999999887789999999999999999999999999999999999999999999999999988653211000
Q ss_pred ccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCC---CCccchhhhhhH
Q 012988 247 HKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKG---YGMECDWWSLGA 323 (452)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~---~~~~~DiwSlGv 323 (452)
........|++.|+|||++.+.. ++.++||||||+
T Consensus 157 ------------------------------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~ 194 (264)
T cd06626 157 ------------------------------------------GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGC 194 (264)
T ss_pred ------------------------------------------cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHH
Confidence 00011245788999999998766 889999999999
Q ss_pred HHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 324 IMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 324 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
++|+|++|+.||...+................+|....+++.+.+||.+||. +|.+|| ++.+++.|||+
T Consensus 195 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~---~~~~i~~~~~~ 264 (264)
T cd06626 195 VVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRP---TASELLQHPFV 264 (264)
T ss_pred HHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCC---CHHHHhcCCCC
Confidence 9999999999997654333333222223445566655678999999999998 999999 99999999996
No 185
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=8.4e-44 Score=355.51 Aligned_cols=258 Identities=23% Similarity=0.300 Sum_probs=207.8
Q ss_pred CCCCCCCeeEeceeccCCCeEEEEEEE-----ccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEE
Q 012988 81 HKICVDDFELLTIIGRGAFGEVRLCRE-----KKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYS 154 (452)
Q Consensus 81 ~~~~~~~y~i~~~LG~G~~g~V~~a~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~ 154 (452)
..+..++|++.+.||+|+||+||+|.+ ..++..||+|+++.... ....+.+.+|+.+++.+ +||||++++++
T Consensus 30 ~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~Ei~il~~l~~HpnIv~l~~~ 107 (375)
T cd05104 30 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHINIVNLLGA 107 (375)
T ss_pred cccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC--cHHHHHHHHHHHHHHHhcCCcceeeeeee
Confidence 345567899999999999999999974 34567899999865421 22345688899999999 89999999999
Q ss_pred EEcCCeEEEEEeecCCCChHHHHHhcC-----------------------------------------------------
Q 012988 155 FQDTEYLYLIMEYLPGGDMMTLLMRED----------------------------------------------------- 181 (452)
Q Consensus 155 ~~~~~~~~lV~E~~~ggsL~~~l~~~~----------------------------------------------------- 181 (452)
+.+.+..|+|||||+||+|.+++....
T Consensus 108 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
T cd05104 108 CTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRR 187 (375)
T ss_pred eccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccc
Confidence 999999999999999999999986422
Q ss_pred ----------------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 182 ----------------------TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 182 ----------------------~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
.+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 267 (375)
T cd05104 188 SVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRND 267 (375)
T ss_pred ccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCc
Confidence 3677888899999999999999999999999999999999999999999998865311
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhh
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWW 319 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Diw 319 (452)
... .......++..|+|||++.+..++.++|||
T Consensus 268 ~~~-----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~ 300 (375)
T cd05104 268 SNY-----------------------------------------------VVKGNARLPVKWMAPESIFNCVYTFESDVW 300 (375)
T ss_pred ccc-----------------------------------------------cccCCCCCCcceeChhHhcCCCCCCCCCHH
Confidence 000 001123356789999999999999999999
Q ss_pred hhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcC
Q 012988 320 SLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAH 392 (452)
Q Consensus 320 SlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~h 392 (452)
||||++|+|++ |..||........+............| ...+.++.+||.+||. ||.+|| ++.+|++.
T Consensus 301 slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dP~~RP---s~~eil~~ 370 (375)
T cd05104 301 SYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSP--ECAPSEMYDIMKSCWDADPLKRP---TFKQIVQL 370 (375)
T ss_pred HHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCC--CCCCHHHHHHHHHHccCChhHCc---CHHHHHHH
Confidence 99999999998 899998765544444444322222222 3568899999999999 999999 89998753
No 186
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.8e-43 Score=339.12 Aligned_cols=254 Identities=30% Similarity=0.495 Sum_probs=209.8
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEEc-----
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQD----- 157 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~----- 157 (452)
..+.|++.+.||.|+||.||+|.+..+++.||+|++.... .....+..|+.+++.+ +|+||++++++|..
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 89 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE----DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPG 89 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh----HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccC
Confidence 4578999999999999999999999999999999986542 2335677899999988 79999999999853
Q ss_pred -CCeEEEEEeecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCc
Q 012988 158 -TEYLYLIMEYLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCK 234 (452)
Q Consensus 158 -~~~~~lV~E~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~ 234 (452)
...+|+||||+++|+|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++.
T Consensus 90 ~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~ 169 (282)
T cd06636 90 HDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSA 169 (282)
T ss_pred CCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchh
Confidence 46789999999999999998653 458888999999999999999999999999999999999999999999999987
Q ss_pred cCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhcc-----C
Q 012988 235 PLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLL-----K 309 (452)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~-----~ 309 (452)
...... .......|++.|+|||++. +
T Consensus 170 ~~~~~~-------------------------------------------------~~~~~~~~~~~y~aPE~l~~~~~~~ 200 (282)
T cd06636 170 QLDRTV-------------------------------------------------GRRNTFIGTPYWMAPEVIACDENPD 200 (282)
T ss_pred hhhccc-------------------------------------------------cCCCcccccccccCHhhcCcccCcC
Confidence 542110 0011356899999999986 3
Q ss_pred CCCCccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHH
Q 012988 310 KGYGMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQ 388 (452)
Q Consensus 310 ~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~e 388 (452)
..++.++|||||||++|+|++|..||....+......+... .... .....++.++.+||.+||. ||.+|| ++.+
T Consensus 201 ~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~li~~cl~~~p~~Rp---~~~e 275 (282)
T cd06636 201 ATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN-PPPK-LKSKKWSKKFIDFIEGCLVKNYLSRP---STEQ 275 (282)
T ss_pred cCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhC-CCCC-CcccccCHHHHHHHHHHhCCChhhCc---CHHH
Confidence 56788999999999999999999999876655544443321 1111 1223578999999999999 999999 9999
Q ss_pred HhcCCCc
Q 012988 389 IKAHPWF 395 (452)
Q Consensus 389 il~hp~f 395 (452)
|++||||
T Consensus 276 ll~~~~~ 282 (282)
T cd06636 276 LLKHPFI 282 (282)
T ss_pred HhcCCCC
Confidence 9999998
No 187
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.2e-43 Score=343.14 Aligned_cols=258 Identities=31% Similarity=0.497 Sum_probs=214.1
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhc--ccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMV--KRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
+|++++.||.|+||.||+|.+..+|+.||+|++...... .......+..|+.+++.++|+||+++++++.+.+.+|+|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 488999999999999999999999999999999765433 122334567899999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 165 MEYLPGGDMMTLLMRED-TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
|||+ +|+|.+++.... .+++..+..++.||+.||.|||++||+|+||||+|||++.+|.++|+|||++.......
T Consensus 81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~--- 156 (298)
T cd07841 81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN--- 156 (298)
T ss_pred Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC---
Confidence 9999 999999997765 79999999999999999999999999999999999999999999999999988653211
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchhhhhh
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDWWSLG 322 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~DiwSlG 322 (452)
.......+++.|+|||++.+ ..++.++||||||
T Consensus 157 ----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG 190 (298)
T cd07841 157 ----------------------------------------------RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVG 190 (298)
T ss_pred ----------------------------------------------ccccccccceeeeCHHHHhCCCCCCcHHHHHHHH
Confidence 00112356888999999865 4678999999999
Q ss_pred HHHHHhhhCCCCCCCCChHHHHHHHhhccCcc------------------cCC------CCCCCChhHHHHHHHhhc-Cc
Q 012988 323 AIMYEMLVGYPPFYADDPITTCRKIVHWRNHL------------------KFP------DDSKLSPEAKDLICRLLC-DV 377 (452)
Q Consensus 323 vil~elltG~~Pf~~~~~~~~~~~i~~~~~~~------------------~~p------~~~~~s~~~~dLi~~mL~-dp 377 (452)
|++|+|++|.+||.+.+....+..+....... ..+ ....++..+.+||.+||. ||
T Consensus 191 ~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P 270 (298)
T cd07841 191 CIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNP 270 (298)
T ss_pred HHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCc
Confidence 99999999999998877766555554311000 000 012357889999999999 99
Q ss_pred cccCCCCCHHHHhcCCCcCC
Q 012988 378 EHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 378 ~~R~~~~~~~eil~hp~f~~ 397 (452)
.+|| ++.+++.||||.+
T Consensus 271 ~~R~---s~~e~l~~~~~~~ 287 (298)
T cd07841 271 NKRI---TARQALEHPYFSN 287 (298)
T ss_pred ccCc---CHHHHhhCccccC
Confidence 9999 9999999999985
No 188
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=2.9e-43 Score=332.58 Aligned_cols=254 Identities=33% Similarity=0.566 Sum_probs=216.4
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhc--ccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMV--KRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
+|+..+.||+|+||+||+|....++..||+|++...... .......+.+|+.+++.++|+||+++++++.+...+|+|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 477889999999999999999989999999998654321 223456788999999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 165 MEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
|||+++++|.+++.+...+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~---- 156 (258)
T cd06632 81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS---- 156 (258)
T ss_pred EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc----
Confidence 9999999999999888889999999999999999999999999999999999999999999999999987643110
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCC-CCccchhhhhhH
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKG-YGMECDWWSLGA 323 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~-~~~~~DiwSlGv 323 (452)
......|++.|+|||.+.... ++.++|+|||||
T Consensus 157 ----------------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~ 190 (258)
T cd06632 157 ----------------------------------------------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGC 190 (258)
T ss_pred ----------------------------------------------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHH
Confidence 011346889999999998766 899999999999
Q ss_pred HHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 324 IMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 324 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
++|+|++|..||...........+........++ ..+++.+.+||.+||. +|.+|| ++.+++.|||+
T Consensus 191 ~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rp---~~~~~l~~~~~ 258 (258)
T cd06632 191 TVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIP--DHLSDEAKDFILKCLQRDPSLRP---TAAELLEHPFV 258 (258)
T ss_pred HHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcC--CCcCHHHHHHHHHHhhcCcccCc---CHHHHhcCCCC
Confidence 9999999999998776555554444322222333 3578999999999998 999999 99999999996
No 189
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-45 Score=356.68 Aligned_cols=251 Identities=27% Similarity=0.406 Sum_probs=221.8
Q ss_pred eeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEee
Q 012988 88 FELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEY 167 (452)
Q Consensus 88 y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~ 167 (452)
|.-++.||.|+||.||-|++..+.+.||||++.-+.......-+++..|+.+|+.+.|||++.+-++|..+...++||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 55677899999999999999999999999999766555555667899999999999999999999999999999999999
Q ss_pred cCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcc
Q 012988 168 LPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHE 246 (452)
Q Consensus 168 ~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~ 246 (452)
| -|+-.+++.- .+++.+.++..|+.+.+.||.|||+.+.||||||..|||+++.|.|||+|||.|....
T Consensus 108 C-lGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~--------- 177 (948)
T KOG0577|consen 108 C-LGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMA--------- 177 (948)
T ss_pred H-hccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcC---------
Confidence 9 5677777754 4689999999999999999999999999999999999999999999999999887542
Q ss_pred ccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC---CCCCccchhhhhhH
Q 012988 247 HKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK---KGYGMECDWWSLGA 323 (452)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~---~~~~~~~DiwSlGv 323 (452)
.+.+++|||.|||||++.. +.|+-++|||||||
T Consensus 178 --------------------------------------------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGI 213 (948)
T KOG0577|consen 178 --------------------------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 213 (948)
T ss_pred --------------------------------------------chhcccCCccccchhHheeccccccCCccceeeccc
Confidence 2347899999999999873 67999999999999
Q ss_pred HHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 324 IMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 324 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
+..||.-.++|++..+....+..|... ..+.++. ...|+.++.||..||+ -|.+|| +.++++.|+|...
T Consensus 214 TCIELAERkPPlFnMNAMSALYHIAQN-esPtLqs-~eWS~~F~~Fvd~CLqKipqeRp---tse~ll~H~fv~R 283 (948)
T KOG0577|consen 214 TCIELAERKPPLFNMNAMSALYHIAQN-ESPTLQS-NEWSDYFRNFVDSCLQKIPQERP---TSEELLKHRFVLR 283 (948)
T ss_pred hhhhhhhcCCCccCchHHHHHHHHHhc-CCCCCCC-chhHHHHHHHHHHHHhhCcccCC---cHHHHhhcchhcc
Confidence 999999999999999988888888762 3344443 3578999999999999 999999 9999999999854
No 190
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=5.3e-43 Score=332.81 Aligned_cols=259 Identities=31% Similarity=0.536 Sum_probs=217.8
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchh--cccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC--CeE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEM--VKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT--EYL 161 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~--~~~ 161 (452)
.+|++.+.||+|+||.||+|.+..++..||+|++..... ........+.+|+.+++.++|+||+++++++.+. ..+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 579999999999999999999999999999998754321 1223456788999999999999999999998764 468
Q ss_pred EEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 162 YLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
++||||+++++|.+++...+.+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||+++.......
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 161 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM 161 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccc
Confidence 99999999999999998878899999999999999999999999999999999999999999999999999886531100
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSL 321 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSl 321 (452)
.........|+..|+|||++.+..++.++|+|||
T Consensus 162 ----------------------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 195 (264)
T cd06653 162 ----------------------------------------------SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSV 195 (264)
T ss_pred ----------------------------------------------cCccccccCCcccccCHhhhcCCCCCccccHHHH
Confidence 0000113468899999999998889999999999
Q ss_pred hHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhcCccccCCCCCHHHHhcCCCc
Q 012988 322 GAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLCDVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 322 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~dp~~R~~~~~~~eil~hp~f 395 (452)
||++|+|++|+.||..........++........+|. .+++.+.++|.+||.+|..|| ++.+++.|||.
T Consensus 196 G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~i~~~l~~~~~r~---~~~~~~~~~~~ 264 (264)
T cd06653 196 ACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPD--GVSDACRDFLKQIFVEEKRRP---TAEFLLRHPFV 264 (264)
T ss_pred HHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCc--ccCHHHHHHHHHHhcCcccCc---cHHHHhcCCCC
Confidence 9999999999999988776666665554333333443 688999999999999889999 99999999984
No 191
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=4e-43 Score=331.73 Aligned_cols=253 Identities=29% Similarity=0.522 Sum_probs=217.8
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
+|++++.||+|+||.||++.+..+|+.||+|++...... ......+.+|+.+++.++||||+++++++...+..|+|||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMS-PKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCC-hHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 589999999999999999999999999999998754332 2234578889999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 167 YLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 167 ~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
|+++++|.+++... ..+++..+..++.|++.||.|||++|++|+||+|+|||++.++.++|+|||++.......
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~---- 155 (256)
T cd08218 80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV---- 155 (256)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch----
Confidence 99999999998664 357899999999999999999999999999999999999999999999999987553110
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHH
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 324 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvi 324 (452)
.......|++.|+|||++.+..++.++|+|||||+
T Consensus 156 ---------------------------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i 190 (256)
T cd08218 156 ---------------------------------------------ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCV 190 (256)
T ss_pred ---------------------------------------------hhhhhccCCccccCHHHhCCCCCCCccchhHHHHH
Confidence 00113458899999999998889999999999999
Q ss_pred HHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 325 MYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 325 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
+|+|++|..||...+..+....+.... ....+ ..++.++.++|.+||. +|.+|| ++.+++.||||
T Consensus 191 ~~~l~~g~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~li~~~l~~~p~~Rp---~~~~vl~~~~~ 256 (256)
T cd08218 191 LYEMCTLKHAFEAGNMKNLVLKIIRGS-YPPVS--SHYSYDLRNLVSQLFKRNPRDRP---SVNSILEKNFI 256 (256)
T ss_pred HHHHHcCCCCccCCCHHHHHHHHhcCC-CCCCc--ccCCHHHHHHHHHHhhCChhhCc---CHHHHhhCcCC
Confidence 999999999998888777776665422 22222 3678999999999998 999999 99999999998
No 192
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.7e-43 Score=345.11 Aligned_cols=249 Identities=25% Similarity=0.425 Sum_probs=191.0
Q ss_pred ceeccCCCeEEEEEEEcc--CCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEE--cCCeEEEEEee
Q 012988 92 TIIGRGAFGEVRLCREKK--SGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQ--DTEYLYLIMEY 167 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~--~~~~~~lV~E~ 167 (452)
.+||+|+||+||+|..+. ++..||+|.+.... ....+.+|+.+++.++||||+++++++. ....+|+||||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-----ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC-----CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 579999999999999754 56889999886542 2235678999999999999999999985 45678999999
Q ss_pred cCCCChHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEE----CCCCcEEEeeccCCc
Q 012988 168 LPGGDMMTLLMRE---------DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLL----DKNGHMKLSDFGLCK 234 (452)
Q Consensus 168 ~~ggsL~~~l~~~---------~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl----~~~g~ikl~DFGla~ 234 (452)
+. ++|.+++... ..+++..++.++.|++.||.|||+.||+||||||+|||+ +.++.+||+|||+++
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 82 AE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred eC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 95 5787776421 248899999999999999999999999999999999999 567799999999998
Q ss_pred cCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCC
Q 012988 235 PLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYG 313 (452)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~ 313 (452)
........ ........||+.|+|||++.+ ..++
T Consensus 161 ~~~~~~~~----------------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~ 194 (317)
T cd07867 161 LFNSPLKP----------------------------------------------LADLDPVVVTFWYRAPELLLGARHYT 194 (317)
T ss_pred ccCCCccc----------------------------------------------ccccCcceecccccCcHHhcCCCccC
Confidence 65322100 001124578999999999976 4579
Q ss_pred ccchhhhhhHHHHHhhhCCCCCCCCChH---------HHHHHHhh---------ccC---cccCC---------------
Q 012988 314 MECDWWSLGAIMYEMLVGYPPFYADDPI---------TTCRKIVH---------WRN---HLKFP--------------- 357 (452)
Q Consensus 314 ~~~DiwSlGvil~elltG~~Pf~~~~~~---------~~~~~i~~---------~~~---~~~~p--------------- 357 (452)
.++|||||||++|+|+||.+||...... .....+.. |.. ...++
T Consensus 195 ~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (317)
T cd07867 195 KAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSS 274 (317)
T ss_pred cHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCch
Confidence 9999999999999999999999754321 11111110 000 00000
Q ss_pred -------CCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 358 -------DDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 358 -------~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
.....+..+.+||.+||. ||.+|| |+.|+++||||
T Consensus 275 ~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~---t~~e~l~hp~f 317 (317)
T cd07867 275 LIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRI---TSEQALQDPYF 317 (317)
T ss_pred hhhhhhcccCCCChHHHHHHHHHhccCccccc---CHHHHhcCCCC
Confidence 001235678899999999 999999 99999999998
No 193
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=5.4e-43 Score=330.81 Aligned_cols=253 Identities=31% Similarity=0.514 Sum_probs=219.3
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
+|++++.||.|+||.||.+++..++..+++|.+...... ......+.+|+.+++.++|+||+++++++.+.+.+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLS-EKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccc-hhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 599999999999999999999999999999998654322 2345567899999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 167 YLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 167 ~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
|+++|+|.+++.+. ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.+||+|||++........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~--- 156 (256)
T cd08221 80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS--- 156 (256)
T ss_pred ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc---
Confidence 99999999999764 4689999999999999999999999999999999999999999999999999876531110
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHH
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 324 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvi 324 (452)
......|++.|+|||++.+..++.++||||||++
T Consensus 157 ----------------------------------------------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i 190 (256)
T cd08221 157 ----------------------------------------------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCV 190 (256)
T ss_pred ----------------------------------------------cccccCCCccccCHhhcCCCCCCCcchhHHHHHH
Confidence 0113468999999999998888999999999999
Q ss_pred HHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 325 MYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 325 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
+|+|++|..||...+..+....+...... . ....++.++.++|.+||. +|.+|| ++.++++|||+
T Consensus 191 ~~~l~~g~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~i~~~l~~~p~~R~---s~~~ll~~~~l 256 (256)
T cd08221 191 LYELLTLKRTFDATNPLNLVVKIVQGNYT-P--VVSVYSSELISLVHSLLQQDPEKRP---TADEVLDQPLL 256 (256)
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHcCCCC-C--CccccCHHHHHHHHHHcccCcccCC---CHHHHhhCcCC
Confidence 99999999999988887777777653211 1 224678999999999998 999999 99999999996
No 194
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=3.3e-43 Score=337.95 Aligned_cols=258 Identities=29% Similarity=0.483 Sum_probs=211.2
Q ss_pred CCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEE---
Q 012988 81 HKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQ--- 156 (452)
Q Consensus 81 ~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~--- 156 (452)
.....++|++++.||+|+||+||+|.+..+++.||+|++.... .....+.+|+.+++.+ +||||+++++++.
T Consensus 13 ~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 88 (286)
T cd06638 13 FPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD 88 (286)
T ss_pred CCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence 3456689999999999999999999999999999999875432 1234577899999999 6999999999873
Q ss_pred --cCCeEEEEEeecCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeec
Q 012988 157 --DTEYLYLIMEYLPGGDMMTLLMR----EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDF 230 (452)
Q Consensus 157 --~~~~~~lV~E~~~ggsL~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DF 230 (452)
+.+.+|+||||++|++|.+++.. ...+++..+..++.|++.||.|||+.+|+||||||+||+++.++.++|+||
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~df 168 (286)
T cd06638 89 VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDF 168 (286)
T ss_pred cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccC
Confidence 45679999999999999988753 356889999999999999999999999999999999999999999999999
Q ss_pred cCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-
Q 012988 231 GLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK- 309 (452)
Q Consensus 231 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~- 309 (452)
|+++.+.... .......|++.|+|||++..
T Consensus 169 g~~~~~~~~~-------------------------------------------------~~~~~~~~~~~y~aPE~~~~~ 199 (286)
T cd06638 169 GVSAQLTSTR-------------------------------------------------LRRNTSVGTPFWMAPEVIACE 199 (286)
T ss_pred CceeecccCC-------------------------------------------------CccccccCCCcccChhhhchh
Confidence 9987653110 00113468999999999853
Q ss_pred ----CCCCccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC
Q 012988 310 ----KGYGMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG 384 (452)
Q Consensus 310 ----~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~ 384 (452)
..++.++|||||||++|+|++|..||...........+... ..........++..+.+||.+||. ||.+||
T Consensus 200 ~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp--- 275 (286)
T cd06638 200 QQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN-PPPTLHQPELWSNEFNDFIRKCLTKDYEKRP--- 275 (286)
T ss_pred hhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcccc-CCCcccCCCCcCHHHHHHHHHHccCCcccCC---
Confidence 45788999999999999999999999877665544443322 112222223467899999999998 999999
Q ss_pred CHHHHhcCCCc
Q 012988 385 GAHQIKAHPWF 395 (452)
Q Consensus 385 ~~~eil~hp~f 395 (452)
++.+|++|+||
T Consensus 276 s~~ell~~~~~ 286 (286)
T cd06638 276 TVSDLLQHVFI 286 (286)
T ss_pred CHHHHhhcccC
Confidence 99999999997
No 195
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2.8e-43 Score=335.22 Aligned_cols=252 Identities=18% Similarity=0.268 Sum_probs=210.1
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEc---cCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCe
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREK---KSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEY 160 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~ 160 (452)
..++|++.+.||+|+||.||+|..+ ..+..||+|+++... .......+.+|+.+++.++||||+++++++...+.
T Consensus 3 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 80 (266)
T cd05064 3 DNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC--SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNT 80 (266)
T ss_pred chHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCC
Confidence 4567999999999999999999875 346789999987542 22334568889999999999999999999999999
Q ss_pred EEEEEeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 161 LYLIMEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 161 ~~lV~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
+|+||||+++|+|.+++... ..+++..+..++.|++.||+|||++||+||||||+|||++.++.++++|||.+......
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~ 160 (266)
T cd05064 81 MMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSE 160 (266)
T ss_pred cEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCccccccccc
Confidence 99999999999999999764 57899999999999999999999999999999999999999999999999986643211
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhh
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWW 319 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Diw 319 (452)
.. .......++..|+|||++.+..++.++|||
T Consensus 161 ~~------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 192 (266)
T cd05064 161 AI------------------------------------------------YTTMSGKSPVLWAAPEAIQYHHFSSASDVW 192 (266)
T ss_pred ch------------------------------------------------hcccCCCCceeecCHHHHhhCCccchhHHH
Confidence 00 000122456789999999999999999999
Q ss_pred hhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 320 SLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 320 SlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
||||++||+++ |..||.+.+.......+... ...|.+..++..+.+++.+|+. +|.+|| ++.+|++
T Consensus 193 slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~c~~~~p~~RP---~~~~i~~ 260 (266)
T cd05064 193 SFGIVMWEVMSYGERPYWDMSGQDVIKAVEDG---FRLPAPRNCPNLLHQLMLDCWQKERGERP---RFSQIHS 260 (266)
T ss_pred HHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC---CCCCCCCCCCHHHHHHHHHHcCCCchhCC---CHHHHHH
Confidence 99999999775 99999988877776666542 2233445788999999999999 999999 8888764
No 196
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=2.5e-43 Score=338.09 Aligned_cols=258 Identities=28% Similarity=0.490 Sum_probs=208.1
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHH-HHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNL-LAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~i-l~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
++|++++.||+|+||.||+|.++.+|..||+|++...... .. ...+..|..+ ++.++||||+++++++...+.+|+|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~-~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS-QE-QKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc-HH-HHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 4799999999999999999999999999999998764321 11 2334445554 6677999999999999999999999
Q ss_pred EeecCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 165 MEYLPGGDMMTLLMR----EDTLTENVARFYIAQSVLAIESIHKH-NYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~-givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
|||++ |+|.+++.. ...+++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||++..+...
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 79 MEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 99995 688777754 34689999999999999999999997 9999999999999999999999999998754211
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC----CCCCcc
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK----KGYGME 315 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~----~~~~~~ 315 (452)
. ......|+..|+|||++.+ ..++.+
T Consensus 158 ~--------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~ 187 (283)
T cd06617 158 V--------------------------------------------------AKTIDAGCKPYMAPERINPELNQKGYDVK 187 (283)
T ss_pred c--------------------------------------------------ccccccCCccccChhhcCCcccccccCcc
Confidence 0 0112458889999999864 457889
Q ss_pred chhhhhhHHHHHhhhCCCCCCCC-ChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCC
Q 012988 316 CDWWSLGAIMYEMLVGYPPFYAD-DPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHP 393 (452)
Q Consensus 316 ~DiwSlGvil~elltG~~Pf~~~-~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp 393 (452)
+|+|||||++|+|++|+.||... ...+....+.. .....+|. ..+|.++.+||.+||. +|.+|| ++.+++.||
T Consensus 188 ~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~l~~li~~~l~~~p~~Rp---~~~~il~~~ 262 (283)
T cd06617 188 SDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVE-EPSPQLPA-EKFSPEFQDFVNKCLKKNYKERP---NYPELLQHP 262 (283)
T ss_pred ccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHh-cCCCCCCc-cccCHHHHHHHHHHccCChhhCc---CHHHHhcCc
Confidence 99999999999999999999653 33333444332 12223333 2578999999999998 999999 999999999
Q ss_pred CcCCCCcc
Q 012988 394 WFKDVVWD 401 (452)
Q Consensus 394 ~f~~~~~~ 401 (452)
||....+.
T Consensus 263 ~~~~~~~~ 270 (283)
T cd06617 263 FFELHLSK 270 (283)
T ss_pred hhhhcccc
Confidence 99976654
No 197
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=3e-43 Score=337.95 Aligned_cols=257 Identities=31% Similarity=0.504 Sum_probs=214.5
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
+|++.+.||.|+||.||+|.+..+|..||+|++...... ......+.+|+.+++.++||||+++++++.+...+|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE-GGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc-chhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence 589999999999999999999999999999998765322 2345678899999999999999999999999999999999
Q ss_pred ecCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 167 YLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 167 ~~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
|+ +++|.+++.. ...+++..++.++.|++.||.|||+.||+|+||||+||+++.++.++|+|||++........
T Consensus 80 ~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~---- 154 (286)
T cd07832 80 YM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP---- 154 (286)
T ss_pred cc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC----
Confidence 99 9999999865 46799999999999999999999999999999999999999999999999999886532110
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC-CCCccchhhhhhHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK-GYGMECDWWSLGAI 324 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~-~~~~~~DiwSlGvi 324 (452)
.......|+..|+|||++.+. .++.++|||||||+
T Consensus 155 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~ 190 (286)
T cd07832 155 --------------------------------------------RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCI 190 (286)
T ss_pred --------------------------------------------CccccccCcccccCceeeeccccCCchhHHHHHHHH
Confidence 001134689999999998754 46899999999999
Q ss_pred HHHhhhCCCCCCCCChHHHHHHHhhccCc-----------------ccCCC---------CCCCChhHHHHHHHhhc-Cc
Q 012988 325 MYEMLVGYPPFYADDPITTCRKIVHWRNH-----------------LKFPD---------DSKLSPEAKDLICRLLC-DV 377 (452)
Q Consensus 325 l~elltG~~Pf~~~~~~~~~~~i~~~~~~-----------------~~~p~---------~~~~s~~~~dLi~~mL~-dp 377 (452)
+|+|++|.+||.+.+....+..+...... ..++. ...++..+.+||.+||. ||
T Consensus 191 l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 270 (286)
T cd07832 191 FAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDP 270 (286)
T ss_pred HHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccCh
Confidence 99999999999887776665555431110 11111 12457899999999999 99
Q ss_pred cccCCCCCHHHHhcCCCcC
Q 012988 378 EHRLGTGGAHQIKAHPWFK 396 (452)
Q Consensus 378 ~~R~~~~~~~eil~hp~f~ 396 (452)
.+|| ++.+++.||||.
T Consensus 271 ~~R~---~~~~~l~h~~~~ 286 (286)
T cd07832 271 SKRL---SAAEALRHPYFT 286 (286)
T ss_pred hhCC---CHHHHhhCcCcC
Confidence 9999 999999999993
No 198
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=4.6e-43 Score=330.99 Aligned_cols=252 Identities=31% Similarity=0.565 Sum_probs=216.7
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
+|++++.||+|+||.||+|.+..+++.+|+|++..... .......+.+|+.+++.++||||+++++.+...+.+++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM-TKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccc-ccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence 58999999999999999999999999999999876543 23345678899999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCC-cEEEeeccCCccCCCCcchh
Q 012988 167 YLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNG-HMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 167 ~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g-~ikl~DFGla~~~~~~~~~~ 243 (452)
|+++++|.+++... ..+++..+..++.|++.||.|||++||+|+||+|+||+++.++ .++|+|||++.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~--- 156 (256)
T cd08220 80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS--- 156 (256)
T ss_pred cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc---
Confidence 99999999999763 3589999999999999999999999999999999999998655 57999999988653110
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhH
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 323 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGv 323 (452)
......|+..|+|||.+.+..++.++||||||+
T Consensus 157 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~ 189 (256)
T cd08220 157 -----------------------------------------------KAYTVVGTPCYISPELCEGKPYNQKSDIWALGC 189 (256)
T ss_pred -----------------------------------------------cccccccCCcccCchhccCCCCCcccchHHHHH
Confidence 011346889999999999888999999999999
Q ss_pred HHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 324 IMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 324 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
++|+|++|..||.+.+.......+... ....++ ..++.++.++|.+||. ||.+|| ++.+++.||||
T Consensus 190 ~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~l~~li~~~l~~~p~~Rp---t~~~ll~~p~~ 256 (256)
T cd08220 190 VLYELASLKRAFEAANLPALVLKIMSG-TFAPIS--DRYSPDLRQLILSMLNLDPSKRP---QLSQIMAQPIC 256 (256)
T ss_pred HHHHHHhCCCCcccCchHHHHHHHHhc-CCCCCC--CCcCHHHHHHHHHHccCChhhCC---CHHHHhhCCCC
Confidence 999999999999888776666666542 222233 3588999999999998 999999 99999999997
No 199
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3.1e-43 Score=341.55 Aligned_cols=255 Identities=20% Similarity=0.333 Sum_probs=204.5
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEcc----------------CCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCc
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKK----------------SGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHC 147 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~----------------~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~ 147 (452)
..++|++.++||+|+||.||+|.+.. ++..||+|++.... .......+.+|+.++..++|||
T Consensus 3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~n 80 (304)
T cd05096 3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLKDPN 80 (304)
T ss_pred chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCC
Confidence 45789999999999999999998532 34579999986542 2233566889999999999999
Q ss_pred eeeEEEEEEcCCeEEEEEeecCCCChHHHHHhcC-------------------CCCHHHHHHHHHHHHHHHHHHHHCCee
Q 012988 148 IVKLYYSFQDTEYLYLIMEYLPGGDMMTLLMRED-------------------TLTENVARFYIAQSVLAIESIHKHNYI 208 (452)
Q Consensus 148 iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~-------------------~~~~~~~~~~~~ql~~aL~~LH~~giv 208 (452)
|+++++++.+.+.+|+||||+++|+|.+++.... .++...+..++.|++.||.|||+.||+
T Consensus 81 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~iv 160 (304)
T cd05096 81 IIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFV 160 (304)
T ss_pred eeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 9999999999999999999999999999985532 356678889999999999999999999
Q ss_pred ecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhc
Q 012988 209 HRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNR 288 (452)
Q Consensus 209 HrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (452)
||||||+|||++.++.+||+|||+++.+......
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~---------------------------------------------- 194 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYY---------------------------------------------- 194 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCcee----------------------------------------------
Confidence 9999999999999999999999998865321100
Q ss_pred cccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhh--CCCCCCCCChHHHHHHHhhc----cCcccCCCCCCC
Q 012988 289 RKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV--GYPPFYADDPITTCRKIVHW----RNHLKFPDDSKL 362 (452)
Q Consensus 289 ~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ellt--G~~Pf~~~~~~~~~~~i~~~----~~~~~~p~~~~~ 362 (452)
.......++..|+|||++.+..++.++|||||||++|+|++ |..||...+.......+... ...........+
T Consensus 195 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (304)
T cd05096 195 -RIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPC 273 (304)
T ss_pred -EecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCC
Confidence 01113356789999999998899999999999999999986 67888877666555444221 111111222367
Q ss_pred ChhHHHHHHHhhc-CccccCCCCCHHHHh
Q 012988 363 SPEAKDLICRLLC-DVEHRLGTGGAHQIK 390 (452)
Q Consensus 363 s~~~~dLi~~mL~-dp~~R~~~~~~~eil 390 (452)
+..+.+||.+||. ||.+|| ++.+|.
T Consensus 274 ~~~~~~li~~cl~~~p~~RP---s~~~i~ 299 (304)
T cd05096 274 PQGLYELMLQCWSRDCRERP---SFSDIH 299 (304)
T ss_pred CHHHHHHHHHHccCCchhCc---CHHHHH
Confidence 8999999999999 999999 888884
No 200
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.4e-43 Score=338.86 Aligned_cols=274 Identities=41% Similarity=0.740 Sum_probs=225.4
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhC-CCceeeEEEEEEcCCeEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVA-SHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~~~~~~~lV 164 (452)
++|.+.+.||+|+||.||+|.+..+|+.||+|++.+...........+.+|+.+++.+. ||||+++++++.+.+.+++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 47999999999999999999999999999999998765544444567888999999998 99999999999999999999
Q ss_pred EeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 165 MEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
|||+++++|.+++.+.+.+++..+..++.|++.||.|||+.|++|+||+|+||+++.+|.++|+|||++...........
T Consensus 81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~ 160 (280)
T cd05581 81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPES 160 (280)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccccc
Confidence 99999999999998888999999999999999999999999999999999999999999999999999986642211000
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHH
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 324 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvi 324 (452)
.. ...+.+.. ... ..........|+..|+|||++....++.++|+||||++
T Consensus 161 ~~--------------~~~~~~~~---~~~------------~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~ 211 (280)
T cd05581 161 NK--------------GDATNIDS---QIE------------KNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCI 211 (280)
T ss_pred CC--------------CCCccccc---ccc------------ccccccccccCCccccCHHHhCCCCCChhhhHHHHHHH
Confidence 00 00000000 000 00111234568999999999988889999999999999
Q ss_pred HHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCH----HHHhcCCCc
Q 012988 325 MYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGA----HQIKAHPWF 395 (452)
Q Consensus 325 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~----~eil~hp~f 395 (452)
+|++++|+.||...+....+..+.. ....+|. .+++.+.+||.+||. +|.+|| ++ .++++||||
T Consensus 212 l~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~li~~~l~~~p~~R~---~~~~~~~~ll~~~~~ 280 (280)
T cd05581 212 IYQMLTGKPPFRGSNEYLTFQKILK--LEYSFPP--NFPPDAKDLIEKLLVLDPQDRL---GVNEGYDELKAHPFF 280 (280)
T ss_pred HHHHHhCCCCCCCccHHHHHHHHHh--cCCCCCC--ccCHHHHHHHHHHhcCCHhhCC---CcccCHHHHhcCCCC
Confidence 9999999999998877666666553 2333443 678999999999998 999999 88 999999998
No 201
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-44 Score=323.01 Aligned_cols=260 Identities=25% Similarity=0.440 Sum_probs=218.4
Q ss_pred CCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhC-CCceeeEEEEEEcCCe
Q 012988 82 KICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVA-SHCIVKLYYSFQDTEY 160 (452)
Q Consensus 82 ~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~~~~~ 160 (452)
...+++.+++..||.|+.|+||+++.+.+|...|||.+.+... ....+++.+.++++...+ .|+||+++++|..+..
T Consensus 88 ~~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~N--kee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~d 165 (391)
T KOG0983|consen 88 QADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGN--KEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTD 165 (391)
T ss_pred ccChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCC--HHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCch
Confidence 3455678889999999999999999999999999999987643 334566777777776664 8999999999999999
Q ss_pred EEEEEeecCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCCCcEEECCCCcEEEeeccCCccCCC
Q 012988 161 LYLIMEYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHK-HNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDC 238 (452)
Q Consensus 161 ~~lV~E~~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~-~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~ 238 (452)
+++.||.| +.-+..++.+ .++++|..+-.+...++.||.||-+ +||+|||+||+|||+|..|++||||||++-.+-.
T Consensus 166 V~IcMelM-s~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd 244 (391)
T KOG0983|consen 166 VFICMELM-STCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD 244 (391)
T ss_pred HHHHHHHH-HHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeec
Confidence 99999999 4455555544 5789999999999999999999987 4899999999999999999999999999876642
Q ss_pred CcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC---CCCCcc
Q 012988 239 STLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK---KGYGME 315 (452)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~---~~~~~~ 315 (452)
+. ..+...|-+.|||||.+-- ..|+.+
T Consensus 245 Sk--------------------------------------------------AhtrsAGC~~YMaPERidp~~~~kYDiR 274 (391)
T KOG0983|consen 245 SK--------------------------------------------------AHTRSAGCAAYMAPERIDPPDKPKYDIR 274 (391)
T ss_pred cc--------------------------------------------------ccccccCCccccCccccCCCCCCccchh
Confidence 21 1123468899999999863 568999
Q ss_pred chhhhhhHHHHHhhhCCCCCCCC-ChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCC
Q 012988 316 CDWWSLGAIMYEMLVGYPPFYAD-DPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHP 393 (452)
Q Consensus 316 ~DiwSlGvil~elltG~~Pf~~~-~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp 393 (452)
+||||||+.++||.||..||.+. .+.+++.+|++ ..+..+|....+|+.+++|+..||. |+.+|| .-.++|+||
T Consensus 275 aDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln-~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP---~Y~~Ll~h~ 350 (391)
T KOG0983|consen 275 ADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN-EEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRP---KYNKLLEHP 350 (391)
T ss_pred hhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh-cCCCCCCcccCcCHHHHHHHHHHhhcCcccCc---chHHHhcCc
Confidence 99999999999999999999874 45667777776 4555666666799999999999998 999999 899999999
Q ss_pred CcCCC
Q 012988 394 WFKDV 398 (452)
Q Consensus 394 ~f~~~ 398 (452)
|+...
T Consensus 351 Fi~~y 355 (391)
T KOG0983|consen 351 FIKRY 355 (391)
T ss_pred ceeec
Confidence 99853
No 202
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=2.2e-43 Score=338.66 Aligned_cols=255 Identities=22% Similarity=0.365 Sum_probs=213.0
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEccCC-----CEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEc
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREKKSG-----NIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQD 157 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~ 157 (452)
+..++|++++.||+|+||.||+|.....+ ..||+|.+.... .......+.+|+.+++.++||||+++++++.+
T Consensus 2 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~ 79 (283)
T cd05048 2 IPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTK 79 (283)
T ss_pred CChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcCCcccceEEEEEcC
Confidence 34568999999999999999999976655 679999886442 22334568899999999999999999999999
Q ss_pred CCeEEEEEeecCCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECC
Q 012988 158 TEYLYLIMEYLPGGDMMTLLMRE----------------DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDK 221 (452)
Q Consensus 158 ~~~~~lV~E~~~ggsL~~~l~~~----------------~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~ 221 (452)
.+..|++|||+++|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.
T Consensus 80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~ 159 (283)
T cd05048 80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGE 159 (283)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcC
Confidence 99999999999999999999764 45788889999999999999999999999999999999999
Q ss_pred CCcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCcc
Q 012988 222 NGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDY 301 (452)
Q Consensus 222 ~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y 301 (452)
++.++|+|||+++....... ........+|+.|
T Consensus 160 ~~~~~L~dfg~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~y 192 (283)
T cd05048 160 GLTVKISDFGLSRDIYSADY-----------------------------------------------YRVQSKSLLPVRW 192 (283)
T ss_pred CCcEEECCCcceeecccccc-----------------------------------------------ccccCCCcccccc
Confidence 99999999999875431110 0011133578899
Q ss_pred ccchhccCCCCCccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-Cccc
Q 012988 302 IAPEVLLKKGYGMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEH 379 (452)
Q Consensus 302 ~APE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~ 379 (452)
+|||.+.+..++.++|||||||++|||++ |..||.+.+..+....+... ..... ...+++++.+|+.+||. ||.+
T Consensus 193 ~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~-~~~~~--~~~~~~~~~~l~~~c~~~~p~~ 269 (283)
T cd05048 193 MPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSR-QLLPC--PEDCPARVYALMIECWNEIPAR 269 (283)
T ss_pred cCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-CcCCC--cccCCHHHHHHHHHHccCChhh
Confidence 99999998899999999999999999998 99999988887776666542 22222 34689999999999999 9999
Q ss_pred cCCCCCHHHHhcC
Q 012988 380 RLGTGGAHQIKAH 392 (452)
Q Consensus 380 R~~~~~~~eil~h 392 (452)
|| ++.+|+++
T Consensus 270 Rp---~~~~i~~~ 279 (283)
T cd05048 270 RP---RFKDIHTR 279 (283)
T ss_pred Cc---CHHHHHHH
Confidence 99 89998864
No 203
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=5e-43 Score=337.67 Aligned_cols=256 Identities=28% Similarity=0.490 Sum_probs=206.1
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
.++|++++.||.|+||.||+|.++.+++.||+|.+..... ......+.+|+.+++.++|+||+++++++.+.+..|+|
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHE--EGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccc--cCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEE
Confidence 5789999999999999999999999999999999875432 12223466899999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 165 MEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
|||++ ++|.+++... ..+++..++.++.|++.||.|||+.||+||||||+|||++.+|.+||+|||+++.......
T Consensus 82 ~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~-- 158 (291)
T cd07844 82 FEYLD-TDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK-- 158 (291)
T ss_pred EecCC-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCc--
Confidence 99997 5999988664 4689999999999999999999999999999999999999999999999999875321100
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchhhhhh
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDWWSLG 322 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~DiwSlG 322 (452)
......++..|+|||++.+ ..++.++||||||
T Consensus 159 -----------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG 191 (291)
T cd07844 159 -----------------------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVG 191 (291)
T ss_pred -----------------------------------------------cccccccccccCCcHHhhcCcccCcHHHHHHHH
Confidence 0012346889999999875 5589999999999
Q ss_pred HHHHHhhhCCCCCCCCC-hHHHHHHHhhccC-----------------cccCC---------CCCCCC--hhHHHHHHHh
Q 012988 323 AIMYEMLVGYPPFYADD-PITTCRKIVHWRN-----------------HLKFP---------DDSKLS--PEAKDLICRL 373 (452)
Q Consensus 323 vil~elltG~~Pf~~~~-~~~~~~~i~~~~~-----------------~~~~p---------~~~~~s--~~~~dLi~~m 373 (452)
|++|+|++|+.||.+.. ..+....+..... ...++ ....++ .++.+||.+|
T Consensus 192 ~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 271 (291)
T cd07844 192 CIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKF 271 (291)
T ss_pred HHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHH
Confidence 99999999999997665 3233222221000 00000 001234 8889999999
Q ss_pred hc-CccccCCCCCHHHHhcCCCc
Q 012988 374 LC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 374 L~-dp~~R~~~~~~~eil~hp~f 395 (452)
|+ +|.+|| ++.+++.||||
T Consensus 272 L~~~p~~Rp---s~~e~l~~~~f 291 (291)
T cd07844 272 LQYEPKKRI---SAAEAMKHPYF 291 (291)
T ss_pred hccCccccc---CHHHHhcCCCC
Confidence 99 999999 99999999998
No 204
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-44 Score=302.61 Aligned_cols=258 Identities=29% Similarity=0.508 Sum_probs=218.3
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
.|.-.++||+|+||+||+|+++.+++.||+|.+..+.. ....-....+|+-+++.++|.|||+++++...+..+-+|+|
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddd-degvpssalreicllkelkhknivrl~dvlhsdkkltlvfe 81 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCC-CCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence 46677899999999999999999999999999876542 22334567889999999999999999999999999999999
Q ss_pred ecCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 167 YLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 167 ~~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
|| ..+|..+..+ ++.++.+.++.++.|++.||.|+|++++.||||||.|.||+.+|.+||+|||+++.++-+.
T Consensus 82 ~c-dqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipv----- 155 (292)
T KOG0662|consen 82 FC-DQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV----- 155 (292)
T ss_pred Hh-hHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCce-----
Confidence 99 5688888765 6889999999999999999999999999999999999999999999999999999875321
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC-CCCccchhhhhhHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK-GYGMECDWWSLGAI 324 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~-~~~~~~DiwSlGvi 324 (452)
......+-|.+|++|.++.+. -|+.+.|+||.|||
T Consensus 156 --------------------------------------------rcysaevvtlwyrppdvlfgakly~tsidmwsagci 191 (292)
T KOG0662|consen 156 --------------------------------------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCI 191 (292)
T ss_pred --------------------------------------------EeeeceeeeeeccCcceeeeeehhccchHhhhcchH
Confidence 011134678999999999985 57999999999999
Q ss_pred HHHhhh-CCCCCCCCChHHHHHHHhhccCc---------ccCCCC----------------CCCChhHHHHHHHhhc-Cc
Q 012988 325 MYEMLV-GYPPFYADDPITTCRKIVHWRNH---------LKFPDD----------------SKLSPEAKDLICRLLC-DV 377 (452)
Q Consensus 325 l~ellt-G~~Pf~~~~~~~~~~~i~~~~~~---------~~~p~~----------------~~~s~~~~dLi~~mL~-dp 377 (452)
+.|+.. |++.|.+.+..+.+.+|+..-+. -.+|+. +.++...+||++++|. +|
T Consensus 192 faelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp 271 (292)
T KOG0662|consen 192 FAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNP 271 (292)
T ss_pred HHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCc
Confidence 999985 89999999999999888752221 111110 2356678899999997 99
Q ss_pred cccCCCCCHHHHhcCCCcCCC
Q 012988 378 EHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 378 ~~R~~~~~~~eil~hp~f~~~ 398 (452)
.+|+ +++++++||||.+.
T Consensus 272 ~qri---saeaalqhpyf~d~ 289 (292)
T KOG0662|consen 272 AQRI---SAEAALQHPYFSDF 289 (292)
T ss_pred cccc---CHHHHhcCcccccc
Confidence 9999 99999999999864
No 205
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=4.9e-43 Score=340.64 Aligned_cols=256 Identities=25% Similarity=0.384 Sum_probs=214.9
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEE
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLY 162 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~ 162 (452)
.....|++.+.||+|+||+||+|.+..+|+.||+|++.............+.+|+.+++.++||||+++++++.+.+..|
T Consensus 12 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~ 91 (307)
T cd06607 12 DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAW 91 (307)
T ss_pred CcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEE
Confidence 33466999999999999999999999999999999987554333344567889999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 163 LIMEYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 163 lV~E~~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
+||||+. |+|.+++.. ...+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||++......
T Consensus 92 lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~-- 168 (307)
T cd06607 92 LVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA-- 168 (307)
T ss_pred EEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC--
Confidence 9999996 577776654 467999999999999999999999999999999999999999999999999998653211
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhcc---CCCCCccchh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLL---KKGYGMECDW 318 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~---~~~~~~~~Di 318 (452)
....|++.|+|||++. ...++.++||
T Consensus 169 ---------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv 197 (307)
T cd06607 169 ---------------------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDV 197 (307)
T ss_pred ---------------------------------------------------CCccCCccccCceeeeccCCCCCCcccch
Confidence 1245788999999985 3567899999
Q ss_pred hhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 319 WSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 319 wSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
||||+++|+|++|..||.+.+.......+... .....+. ..++..+.+||.+||. ||.+|| ++.+|+.||||..
T Consensus 198 ~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~li~~~l~~~p~~Rp---~~~~il~~~~~~~ 272 (307)
T cd06607 198 WSLGITCIELAERKPPLFNMNAMSALYHIAQN-DSPTLSS-NDWSDYFRNFVDSCLQKIPQDRP---SSEELLKHRFVLR 272 (307)
T ss_pred HHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC-CCCCCCc-hhhCHHHHHHHHHHhcCChhhCc---CHHHHhcChhhcc
Confidence 99999999999999999888776665555432 2222221 2467899999999999 999999 9999999999975
No 206
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.9e-43 Score=340.08 Aligned_cols=262 Identities=27% Similarity=0.446 Sum_probs=210.3
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhC-CCceeeEEEEEEcCCeEEE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVA-SHCIVKLYYSFQDTEYLYL 163 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~~~~~~~l 163 (452)
.++|+.++.||+|+||.||++.+..++..||+|.+...... .....+.+|+.++.++. |+||+++++++..++..++
T Consensus 3 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~ 80 (288)
T cd06616 3 AEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE--KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWI 80 (288)
T ss_pred HHHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh--HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEE
Confidence 35677888999999999999999999999999998754322 33456788999999996 9999999999999999999
Q ss_pred EEeecCCCChHHHH---H--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCCCcEEECCCCcEEEeeccCCccCC
Q 012988 164 IMEYLPGGDMMTLL---M--REDTLTENVARFYIAQSVLAIESIHKH-NYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLD 237 (452)
Q Consensus 164 V~E~~~ggsL~~~l---~--~~~~~~~~~~~~~~~ql~~aL~~LH~~-givHrDlkp~NILl~~~g~ikl~DFGla~~~~ 237 (452)
+|||+. +++.++. . ....+++..+..++.|++.||+|||+. ||+||||||+|||++.++.++|+|||+++.+.
T Consensus 81 ~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 81 CMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred EEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 999985 4555443 2 246799999999999999999999975 99999999999999999999999999987542
Q ss_pred CCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC---CCCc
Q 012988 238 CSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK---GYGM 314 (452)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~---~~~~ 314 (452)
.+. ......||+.|+|||++.+. .++.
T Consensus 160 ~~~--------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~ 189 (288)
T cd06616 160 DSI--------------------------------------------------AKTRDAGCRPYMAPERIDPSARDGYDV 189 (288)
T ss_pred cCC--------------------------------------------------ccccccCccCccCHHHhccccccCCcc
Confidence 110 01133588999999999876 6899
Q ss_pred cchhhhhhHHHHHhhhCCCCCCCCCh-HHHHHHHhhccCcccCCC--CCCCChhHHHHHHHhhc-CccccCCCCCHHHHh
Q 012988 315 ECDWWSLGAIMYEMLVGYPPFYADDP-ITTCRKIVHWRNHLKFPD--DSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIK 390 (452)
Q Consensus 315 ~~DiwSlGvil~elltG~~Pf~~~~~-~~~~~~i~~~~~~~~~p~--~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil 390 (452)
++|||||||++|+|++|+.||..... ......+.. .....++. ...++.++.+||.+||. ||.+|| ++.+|+
T Consensus 190 ~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp---t~~~i~ 265 (288)
T cd06616 190 RSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVK-GDPPILSNSEEREFSPSFVNFINLCLIKDESKRP---KYKELL 265 (288)
T ss_pred hhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcC-CCCCcCCCcCCCccCHHHHHHHHHHccCChhhCc---CHHHHh
Confidence 99999999999999999999976542 122222221 11112221 22578999999999999 999999 999999
Q ss_pred cCCCcCCCCcccc
Q 012988 391 AHPWFKDVVWDKL 403 (452)
Q Consensus 391 ~hp~f~~~~~~~l 403 (452)
.||||+...|.+.
T Consensus 266 ~~~~~~~~~~~~~ 278 (288)
T cd06616 266 EHPFIKDYEERNV 278 (288)
T ss_pred cChhhhchhhcch
Confidence 9999998776654
No 207
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2.6e-43 Score=338.33 Aligned_cols=255 Identities=31% Similarity=0.514 Sum_probs=210.0
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
+|++++.||.|+||.||+|.++.+|+.||||++..... .......+.+|+.+++.++||||+++++++.+.+..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc-ccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence 58999999999999999999999999999998865432 22234568889999999999999999999999999999999
Q ss_pred ecCCCChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 167 YLPGGDMMTLLMR--EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 167 ~~~ggsL~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
|+. ++|..++.. ...+++..+..++.|++.||+|||+.|++||||+|+||+++.++.+||+|||++..+....
T Consensus 80 ~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~---- 154 (284)
T cd07860 80 FLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---- 154 (284)
T ss_pred ccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc----
Confidence 995 688888855 3568999999999999999999999999999999999999999999999999987543110
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCC-CCccchhhhhhH
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKG-YGMECDWWSLGA 323 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~-~~~~~DiwSlGv 323 (452)
.......+++.|+|||++.+.. ++.++|||||||
T Consensus 155 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~ 189 (284)
T cd07860 155 ---------------------------------------------RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 189 (284)
T ss_pred ---------------------------------------------cccccccccccccCCeEEecCCCCCcHHHHHHHHH
Confidence 0011235788999999987644 588999999999
Q ss_pred HHHHhhhCCCCCCCCChHHHHHHHhhccCcc----------------cCCC---------CCCCChhHHHHHHHhhc-Cc
Q 012988 324 IMYEMLVGYPPFYADDPITTCRKIVHWRNHL----------------KFPD---------DSKLSPEAKDLICRLLC-DV 377 (452)
Q Consensus 324 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~----------------~~p~---------~~~~s~~~~dLi~~mL~-dp 377 (452)
++|+|+||+.||.+.+......++....... .++. ...+++++++||.+||. ||
T Consensus 190 il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P 269 (284)
T cd07860 190 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDP 269 (284)
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCc
Confidence 9999999999998877655554443211100 0110 12468899999999999 99
Q ss_pred cccCCCCCHHHHhcCCCc
Q 012988 378 EHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 378 ~~R~~~~~~~eil~hp~f 395 (452)
.+|| ++.+++.||||
T Consensus 270 ~~Rp---t~~~~l~~~~f 284 (284)
T cd07860 270 NKRI---SAKAALAHPFF 284 (284)
T ss_pred ccCC---CHHHHhcCCCC
Confidence 9999 99999999998
No 208
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=3.6e-43 Score=337.78 Aligned_cols=258 Identities=35% Similarity=0.561 Sum_probs=214.2
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++.+.||.|+||.||+|.+..+++.||+|++..... .......+.+|+.+++.++|+||+++++++.+.+.+|+||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED-DEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc-cccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence 479999999999999999999999999999998865432 2334467889999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
||++++.+..++.....+++..+..++.|++.||.|||+.||+||||+|+||+++.++.+||+|||++........
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~---- 155 (288)
T cd07833 80 EYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA---- 155 (288)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc----
Confidence 9999877777766667799999999999999999999999999999999999999999999999999886532110
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC-CCCccchhhhhhHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK-GYGMECDWWSLGAI 324 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~-~~~~~~DiwSlGvi 324 (452)
.......|+..|+|||++.+. .++.++||||||++
T Consensus 156 --------------------------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~ 191 (288)
T cd07833 156 --------------------------------------------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCI 191 (288)
T ss_pred --------------------------------------------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHH
Confidence 011235688999999999887 88999999999999
Q ss_pred HHHhhhCCCCCCCCChHHHHHHHhhccCc-----------------ccCCC-----------CCCCChhHHHHHHHhhc-
Q 012988 325 MYEMLVGYPPFYADDPITTCRKIVHWRNH-----------------LKFPD-----------DSKLSPEAKDLICRLLC- 375 (452)
Q Consensus 325 l~elltG~~Pf~~~~~~~~~~~i~~~~~~-----------------~~~p~-----------~~~~s~~~~dLi~~mL~- 375 (452)
+|+|++|.+||.+.+.......+...... ..++. ...++.++.+||++||.
T Consensus 192 l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 271 (288)
T cd07833 192 MAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRM 271 (288)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhcc
Confidence 99999999999877655544433221000 00100 11358899999999998
Q ss_pred CccccCCCCCHHHHhcCCCc
Q 012988 376 DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 376 dp~~R~~~~~~~eil~hp~f 395 (452)
+|.+|| ++.+++.||||
T Consensus 272 ~p~~Rp---s~~~il~~~~f 288 (288)
T cd07833 272 DPKERL---TCDELLQHPYF 288 (288)
T ss_pred Cchhcc---cHHHHhcCCCC
Confidence 999999 99999999998
No 209
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=5.7e-43 Score=337.79 Aligned_cols=257 Identities=33% Similarity=0.527 Sum_probs=208.9
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhC-CCceeeEEEEEEcCCe----
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVA-SHCIVKLYYSFQDTEY---- 160 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~~~~~---- 160 (452)
++|++.+.||+|+||.||+|.+..+++.||+|++.... ........+.+|+.+++.+. ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEM-DEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhc-cccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 47999999999999999999999999999999886542 22233456788999999995 6999999999987665
Q ss_pred -EEEEEeecCCCChHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECC-CCcEEEeeccCC
Q 012988 161 -LYLIMEYLPGGDMMTLLMRE-----DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDK-NGHMKLSDFGLC 233 (452)
Q Consensus 161 -~~lV~E~~~ggsL~~~l~~~-----~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~-~g~ikl~DFGla 233 (452)
+|+||||+++ +|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|||++
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~ 158 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLG 158 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccc
Confidence 8999999975 888887542 35799999999999999999999999999999999999998 889999999998
Q ss_pred ccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCC
Q 012988 234 KPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGY 312 (452)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~ 312 (452)
+.+.... .......+++.|+|||++.+ ..+
T Consensus 159 ~~~~~~~-------------------------------------------------~~~~~~~~~~~~~aPE~~~~~~~~ 189 (295)
T cd07837 159 RAFSIPV-------------------------------------------------KSYTHEIVTLWYRAPEVLLGSTHY 189 (295)
T ss_pred eecCCCc-------------------------------------------------cccCCcccccCCCChHHhhCCCCC
Confidence 7543110 00112357889999998865 457
Q ss_pred CccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcc---------------cCCC---------CCCCChhHHH
Q 012988 313 GMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHL---------------KFPD---------DSKLSPEAKD 368 (452)
Q Consensus 313 ~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~---------------~~p~---------~~~~s~~~~d 368 (452)
+.++||||||+++|+|++|..||.+.+.......+....... .++. ...++.++.+
T Consensus 190 ~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (295)
T cd07837 190 STPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLD 269 (295)
T ss_pred CchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHH
Confidence 999999999999999999999998877766655544321100 0110 1247899999
Q ss_pred HHHHhhc-CccccCCCCCHHHHhcCCCcC
Q 012988 369 LICRLLC-DVEHRLGTGGAHQIKAHPWFK 396 (452)
Q Consensus 369 Li~~mL~-dp~~R~~~~~~~eil~hp~f~ 396 (452)
||.+||. ||.+|| ++.+++.||||+
T Consensus 270 ~i~~~l~~~P~~R~---~~~eil~~~~~~ 295 (295)
T cd07837 270 LLQKMLRYDPAKRI---SAKAALTHPYFD 295 (295)
T ss_pred HHHHHccCChhhcC---CHHHHhcCCCcC
Confidence 9999999 999999 999999999995
No 210
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=4.5e-43 Score=332.39 Aligned_cols=257 Identities=30% Similarity=0.518 Sum_probs=219.8
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++.+.||.|++|.||+|.+..+++.||+|++...... .....+.+|+.++..++|+||+++++++.....+++||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE--EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEE
Confidence 4799999999999999999999999999999998765321 34567889999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHK-HNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~-~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
||+++++|.+++.....+++..+..++.|++.||.|||+ .|++||||+|+||+++.++.++|+|||++........
T Consensus 79 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~--- 155 (264)
T cd06623 79 EYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD--- 155 (264)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCC---
Confidence 999999999999888889999999999999999999999 9999999999999999999999999999876532110
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHH
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 324 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvi 324 (452)
......|+..|+|||.+.+..++.++|+||||++
T Consensus 156 ----------------------------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~i 189 (264)
T cd06623 156 ----------------------------------------------QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLT 189 (264)
T ss_pred ----------------------------------------------cccceeecccccCHhhhCCCCCCchhhHHHHHHH
Confidence 0113458889999999998889999999999999
Q ss_pred HHHhhhCCCCCCCCC---hHHHHHHHhhccCcccCCCCCC-CChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCCC
Q 012988 325 MYEMLVGYPPFYADD---PITTCRKIVHWRNHLKFPDDSK-LSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDVV 399 (452)
Q Consensus 325 l~elltG~~Pf~~~~---~~~~~~~i~~~~~~~~~p~~~~-~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~~ 399 (452)
+|+|++|..||...+ .......+.. ......+ .. ++..+.++|.+||. +|.+|| ++.++++||||+.++
T Consensus 190 l~~l~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~l~~li~~~l~~~p~~R~---~~~~ll~~~~~~~~~ 263 (264)
T cd06623 190 LLECALGKFPFLPPGQPSFFELMQAICD-GPPPSLP--AEEFSPEFRDFISACLQKDPKKRP---SAAELLQHPFIKKAD 263 (264)
T ss_pred HHHHHhCCCCCccccccCHHHHHHHHhc-CCCCCCC--cccCCHHHHHHHHHHccCChhhCC---CHHHHHhCHHHHhcc
Confidence 999999999998764 3333444432 1122222 24 78999999999998 999999 999999999998654
No 211
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.7e-43 Score=335.77 Aligned_cols=254 Identities=29% Similarity=0.500 Sum_probs=215.0
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++.+.||.|+||.||+|.++.+++.+|+|++..... ......+.+|+.+++.+.||||+++++.+.....+++|+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN--EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC--hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEE
Confidence 468899999999999999999999999999999876532 234466888999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 166 EYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHK-HNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 166 E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~-~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
||+++++|.+++... ..+++..+..++.|++.||.|||+ .|++|+||||+||+++.+|.++|+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~--- 155 (265)
T cd06605 79 EYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL--- 155 (265)
T ss_pred EecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHH---
Confidence 999999999999776 789999999999999999999999 999999999999999999999999999987542110
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhH
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 323 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGv 323 (452)
.....|+..|+|||.+.+..++.++||||||+
T Consensus 156 ------------------------------------------------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ 187 (265)
T cd06605 156 ------------------------------------------------AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGL 187 (265)
T ss_pred ------------------------------------------------hhcccCChhccCHHHHcCCCCCchhhHHHHHH
Confidence 01256888999999999999999999999999
Q ss_pred HHHHhhhCCCCCCCCC-----hHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 324 IMYEMLVGYPPFYADD-----PITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 324 il~elltG~~Pf~~~~-----~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
++|+|++|..||...+ .......+... .....+.. .++.++.+||.+||. ||.+|| ++.+++.||||+.
T Consensus 188 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~li~~~l~~~p~~Rp---t~~~ll~~~~~~~ 262 (265)
T cd06605 188 SLIELATGRFPYPPENDPPDGIFELLQYIVNE-PPPRLPSG-KFSPDFQDFVNLCLIKDPRERP---SYKELLEHPFIKK 262 (265)
T ss_pred HHHHHHhCCCCCCccccccccHHHHHHHHhcC-CCCCCChh-hcCHHHHHHHHHHcCCCchhCc---CHHHHhhCchhhc
Confidence 9999999999997542 22333333321 22223321 278999999999998 999999 9999999999974
No 212
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=6.5e-43 Score=333.15 Aligned_cols=255 Identities=31% Similarity=0.502 Sum_probs=212.2
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEEcCC---
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQDTE--- 159 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~--- 159 (452)
..++|++++.||.|+||.||+|.++.+++.||+|++..... ....+.+|+.+++.+ .|+||+++++++.+..
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED----EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch----hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCC
Confidence 35789999999999999999999999999999999875432 335688999999998 7999999999997544
Q ss_pred ---eEEEEEeecCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccC
Q 012988 160 ---YLYLIMEYLPGGDMMTLLMR----EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGL 232 (452)
Q Consensus 160 ---~~~lV~E~~~ggsL~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGl 232 (452)
.+|+||||+++++|.+++.. +..+++..++.++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||+
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~ 159 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGV 159 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCcc
Confidence 58999999999999998865 35799999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC---
Q 012988 233 CKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK--- 309 (452)
Q Consensus 233 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~--- 309 (452)
+....... .......|++.|+|||++..
T Consensus 160 ~~~~~~~~-------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~ 190 (275)
T cd06608 160 SAQLDSTL-------------------------------------------------GRRNTFIGTPYWMAPEVIACDEQ 190 (275)
T ss_pred ceecccch-------------------------------------------------hhhcCccccccccCHhHhccccc
Confidence 87543110 00113468999999999864
Q ss_pred --CCCCccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCH
Q 012988 310 --KGYGMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGA 386 (452)
Q Consensus 310 --~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~ 386 (452)
..++.++|||||||++|+|++|..||...........+... ..........++.++++||.+||. ||.+|| ++
T Consensus 191 ~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp---t~ 266 (275)
T cd06608 191 PDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRN-PPPTLKSPENWSKKFNDFISECLIKNYEQRP---FM 266 (275)
T ss_pred ccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhcc-CCCCCCchhhcCHHHHHHHHHHhhcChhhCc---CH
Confidence 34678999999999999999999999876665555555432 122222223477899999999998 999999 99
Q ss_pred HHHhcCCCc
Q 012988 387 HQIKAHPWF 395 (452)
Q Consensus 387 ~eil~hp~f 395 (452)
.++++|||+
T Consensus 267 ~~ll~~~~~ 275 (275)
T cd06608 267 EELLEHPFI 275 (275)
T ss_pred HHHhcCCCC
Confidence 999999996
No 213
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=6.5e-43 Score=337.47 Aligned_cols=260 Identities=32% Similarity=0.498 Sum_probs=211.7
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++.+.||.|++|+||+|.++.+|+.||+|++..... .......+.+|+.+++.++||||+++++++.+....|+||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE-DEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc-cccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence 689999999999999999999999999999998865432 2233456788999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECC-CCcEEEeeccCCccCCCCcch
Q 012988 166 EYLPGGDMMTLLMRED--TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDK-NGHMKLSDFGLCKPLDCSTLY 242 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~-~g~ikl~DFGla~~~~~~~~~ 242 (452)
||++ ++|..++.... .+++..++.++.||+.||+|||++||+||||+|+||+++. ++.+||+|||++.......
T Consensus 81 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~-- 157 (294)
T PLN00009 81 EYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV-- 157 (294)
T ss_pred eccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc--
Confidence 9995 57888775543 3578889999999999999999999999999999999985 5579999999987543110
Q ss_pred hhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchhhhh
Q 012988 243 AIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDWWSL 321 (452)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~DiwSl 321 (452)
.......|++.|+|||++.+ ..++.++|||||
T Consensus 158 -----------------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~sl 190 (294)
T PLN00009 158 -----------------------------------------------RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSV 190 (294)
T ss_pred -----------------------------------------------cccccCceeecccCHHHHhCCCCCCcHHHHHHH
Confidence 00113357889999999876 457899999999
Q ss_pred hHHHHHhhhCCCCCCCCChHHHHHHHhhccCcc-------------------cCC------CCCCCChhHHHHHHHhhc-
Q 012988 322 GAIMYEMLVGYPPFYADDPITTCRKIVHWRNHL-------------------KFP------DDSKLSPEAKDLICRLLC- 375 (452)
Q Consensus 322 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~-------------------~~p------~~~~~s~~~~dLi~~mL~- 375 (452)
||++|+|++|.+||...+..+...++....... .++ ....+++++.++|.+||.
T Consensus 191 G~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 270 (294)
T PLN00009 191 GCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRL 270 (294)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccC
Confidence 999999999999998877766666554311100 000 012478899999999999
Q ss_pred CccccCCCCCHHHHhcCCCcCCCC
Q 012988 376 DVEHRLGTGGAHQIKAHPWFKDVV 399 (452)
Q Consensus 376 dp~~R~~~~~~~eil~hp~f~~~~ 399 (452)
+|.+|| ++.+++.||||.+++
T Consensus 271 ~P~~Rp---s~~~~l~~~~~~~~~ 291 (294)
T PLN00009 271 DPSKRI---TARAALEHEYFKDLG 291 (294)
T ss_pred ChhhCc---CHHHHhcCchHhHHh
Confidence 999999 999999999998653
No 214
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-45 Score=387.63 Aligned_cols=260 Identities=31% Similarity=0.467 Sum_probs=225.3
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
-+++-..+||.|.||.||-|.+..+|...|+|.++-.... ......+.+|..++..++|||+|++|++-.+.+.++|.|
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 3577788999999999999999999999999988655443 445567889999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
|||.||+|.+++...+..+|...+.|..|++.||.|||+.|||||||||+|||++.+|.+|++|||.|..+.+....
T Consensus 1314 EyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~--- 1390 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQT--- 1390 (1509)
T ss_pred HHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhc---
Confidence 99999999999988888999999999999999999999999999999999999999999999999999987533100
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC---CCCCccchhhhhh
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK---KGYGMECDWWSLG 322 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~---~~~~~~~DiwSlG 322 (452)
+ .+.....+||+.|||||++.+ .+...++||||||
T Consensus 1391 -------------------~-----------------------~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslG 1428 (1509)
T KOG4645|consen 1391 -------------------M-----------------------PGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLG 1428 (1509)
T ss_pred -------------------C-----------------------CHHHHhhcCCchhcCchhhcccccCCCCcchhhhccc
Confidence 0 011125689999999999986 5678899999999
Q ss_pred HHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcC
Q 012988 323 AIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFK 396 (452)
Q Consensus 323 vil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~ 396 (452)
|++.||+||+.||...+..-.+.--+.....+++|. .+|++.+|||.+||. ||..|. ++.|+++|.|-+
T Consensus 1429 CVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~--~ls~~g~dFle~Cl~~dP~~Rw---~~~qlle~~f~~ 1498 (1509)
T KOG4645|consen 1429 CVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPE--RLSSEGRDFLEHCLEQDPKMRW---TASQLLEHAFGK 1498 (1509)
T ss_pred ceEEEeecCCCchhhccchhHHHhHHhccCCCCCch--hhhHhHHHHHHHHHhcCchhhh---HHHHHHHhhccc
Confidence 999999999999987665554444444456777887 599999999999998 999999 899999999876
No 215
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.5e-44 Score=347.24 Aligned_cols=262 Identities=30% Similarity=0.486 Sum_probs=211.1
Q ss_pred CCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhC-CCceeeEEEEEEcCCe
Q 012988 82 KICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVA-SHCIVKLYYSFQDTEY 160 (452)
Q Consensus 82 ~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~~~~~ 160 (452)
.+....|+++++||.||.++||++.... .+.||+|.+... ......+..+.+|+.+|..|+ |.+||++|+|-..+++
T Consensus 357 ~Vkg~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~-~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~ 434 (677)
T KOG0596|consen 357 KVKGREYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLL-EADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGY 434 (677)
T ss_pred EECcchhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHh-hcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCce
Confidence 3445679999999999999999998654 455666655322 123445678999999999995 8899999999999999
Q ss_pred EEEEEeecCCCChHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 161 LYLIMEYLPGGDMMTLLMREDT-LTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 161 ~~lV~E~~~ggsL~~~l~~~~~-~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
+||||||= .-+|..+|.+... .+...+++|..||+.|++++|..||||-||||.|+|+- .|.+||+|||+|..+...
T Consensus 435 lYmvmE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~D 512 (677)
T KOG0596|consen 435 LYMVMECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPD 512 (677)
T ss_pred EEEEeecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCcc
Confidence 99999986 6799999987654 44478999999999999999999999999999999984 678999999999987644
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCC--------
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKG-------- 311 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~-------- 311 (452)
+.. -...+.+||+.||+||.+....
T Consensus 513 TTs-----------------------------------------------I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~ 545 (677)
T KOG0596|consen 513 TTS-----------------------------------------------IVKDSQVGTVNYMSPEALTDMSSSRENGKS 545 (677)
T ss_pred ccc-----------------------------------------------eeeccccCcccccCHHHHhhccccccCCCc
Confidence 322 1233678999999999987433
Q ss_pred ---CCccchhhhhhHHHHHhhhCCCCCCCCC-hHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCH
Q 012988 312 ---YGMECDWWSLGAIMYEMLVGYPPFYADD-PITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGA 386 (452)
Q Consensus 312 ---~~~~~DiwSlGvil~elltG~~Pf~~~~-~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~ 386 (452)
.+.++||||||||||+|+.|++||..-. ...-+..|..-...++||..+. ..++.++++.||. ||.+|+ ++
T Consensus 546 k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~-~~~li~~mK~CL~rdPkkR~---si 621 (677)
T KOG0596|consen 546 KIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPE-NDELIDVMKCCLARDPKKRW---SI 621 (677)
T ss_pred ceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCC-chHHHHHHHHHHhcCcccCC---Cc
Confidence 4578999999999999999999996432 4444555655445567776432 2449999999999 999999 99
Q ss_pred HHHhcCCCcCCC
Q 012988 387 HQIKAHPWFKDV 398 (452)
Q Consensus 387 ~eil~hp~f~~~ 398 (452)
.++|+|||+..+
T Consensus 622 ~eLLqhpFl~~~ 633 (677)
T KOG0596|consen 622 PELLQHPFLQIQ 633 (677)
T ss_pred HHHhcCcccccc
Confidence 999999999853
No 216
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.7e-43 Score=341.57 Aligned_cols=256 Identities=30% Similarity=0.539 Sum_probs=215.7
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
+.|.....||.|+||.||++.+..++..||||++.... ....+.+.+|+.+++.++|+||+++++.+...+..|+||
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~ 98 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK---QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVM 98 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch---HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEE
Confidence 34555678999999999999999999999999986532 223456788999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
||+++++|.+++. ...+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.......
T Consensus 99 e~~~~~~L~~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~----- 172 (292)
T cd06658 99 EFLEGGALTDIVT-HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV----- 172 (292)
T ss_pred eCCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhccccc-----
Confidence 9999999999874 4568999999999999999999999999999999999999999999999999987542110
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 325 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil 325 (452)
.......|++.|+|||++.+..++.++||||||+++
T Consensus 173 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil 208 (292)
T cd06658 173 --------------------------------------------PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMV 208 (292)
T ss_pred --------------------------------------------ccCceeecCccccCHHHHccCCCCchhhHHHHHHHH
Confidence 001134689999999999988899999999999999
Q ss_pred HHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCC
Q 012988 326 YEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 326 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
|+|++|..||...+.......+... .....+....++..+.+||.+||. ||.+|| ++.++++||||+..
T Consensus 209 ~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp---t~~~il~~~~~~~~ 278 (292)
T cd06658 209 IEMIDGEPPYFNEPPLQAMRRIRDN-LPPRVKDSHKVSSVLRGFLDLMLVREPSQRA---TAQELLQHPFLKLA 278 (292)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHhc-CCCccccccccCHHHHHHHHHHccCChhHCc---CHHHHhhChhhhcc
Confidence 9999999999988776665554432 122223333578999999999999 999999 99999999999853
No 217
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.2e-42 Score=328.34 Aligned_cols=249 Identities=33% Similarity=0.532 Sum_probs=212.7
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
+|++.+.||.|+||.||++.++.++..||+|.+..... ....+.+.+|+.+++.++|+||+++++++.+.+.+|+|||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS--SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc--hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 58999999999999999999999999999999865422 2345677889999999999999999999999999999999
Q ss_pred ecCCCChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 167 YLPGGDMMTLLMR--EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 167 ~~~ggsL~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
|+++|+|.+++.. ...+++..+..++.|++.||.|||++||+|+||||+|||++.++.++|+|||++..+....
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~---- 154 (255)
T cd08219 79 YCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG---- 154 (255)
T ss_pred eCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccc----
Confidence 9999999998865 3468999999999999999999999999999999999999999999999999987543110
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHH
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 324 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvi 324 (452)
.......|++.|+|||++.+..++.++|+||||++
T Consensus 155 ---------------------------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i 189 (255)
T cd08219 155 ---------------------------------------------AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCI 189 (255)
T ss_pred ---------------------------------------------cccccccCCccccCHHHHccCCcCchhhhhhhchh
Confidence 01113468999999999998889999999999999
Q ss_pred HHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcC
Q 012988 325 MYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAH 392 (452)
Q Consensus 325 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~h 392 (452)
+|+|++|..||...+.......+... .....| ..++..+.+||.+||. ||.+|| ++.+++.-
T Consensus 190 ~~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~li~~~l~~~P~~Rp---~~~~il~~ 252 (255)
T cd08219 190 LYELCTLKHPFQANSWKNLILKVCQG-SYKPLP--SHYSYELRSLIKQMFKRNPRSRP---SATTILSR 252 (255)
T ss_pred heehhhccCCCCCCCHHHHHHHHhcC-CCCCCC--cccCHHHHHHHHHHHhCCcccCC---CHHHHhhc
Confidence 99999999999987776666555432 111222 3678999999999999 999999 99999864
No 218
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.2e-42 Score=329.30 Aligned_cols=253 Identities=34% Similarity=0.601 Sum_probs=215.0
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEc--CCeEEEE
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQD--TEYLYLI 164 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~--~~~~~lV 164 (452)
+|++++.||.|+||.||+|.+..++..||+|++..... .....+.+..|+.+++.++||||+++++++.. ...+|++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence 58999999999999999999999999999999876533 23345668889999999999999999998754 4568999
Q ss_pred EeecCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-----HCCeeecCCCCCcEEECCCCcEEEeeccCCcc
Q 012988 165 MEYLPGGDMMTLLMR----EDTLTENVARFYIAQSVLAIESIH-----KHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKP 235 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH-----~~givHrDlkp~NILl~~~g~ikl~DFGla~~ 235 (452)
|||+++++|.+++.. ...+++..+..++.|++.||.||| +.+|+|+||||+||+++.++.+||+|||++..
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI 159 (265)
T ss_pred ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccc
Confidence 999999999999865 367899999999999999999999 89999999999999999999999999999886
Q ss_pred CCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCcc
Q 012988 236 LDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGME 315 (452)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~ 315 (452)
+.... .......|++.|+|||++.+..++.+
T Consensus 160 ~~~~~-------------------------------------------------~~~~~~~~~~~~~~pE~~~~~~~~~~ 190 (265)
T cd08217 160 LGHDS-------------------------------------------------SFAKTYVGTPYYMSPEQLNHMSYDEK 190 (265)
T ss_pred ccCCc-------------------------------------------------ccccccccCCCccChhhhcCCCCCch
Confidence 53211 00113468999999999998889999
Q ss_pred chhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCC
Q 012988 316 CDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPW 394 (452)
Q Consensus 316 ~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~ 394 (452)
+|+||||+++|+|++|..||...+.......+... ....++ ..++..+.+||.+||. +|.+|| ++.+|++|||
T Consensus 191 ~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~l~~~~l~~~p~~Rp---~~~~il~~~~ 264 (265)
T cd08217 191 SDIWSLGCLIYELCALSPPFTARNQLQLASKIKEG-KFRRIP--YRYSSELNEVIKSMLNVDPDKRP---STEELLQLPL 264 (265)
T ss_pred hHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcC-CCCCCc--cccCHHHHHHHHHHccCCcccCC---CHHHHhhCCC
Confidence 99999999999999999999988766655555442 112233 3678999999999998 999999 9999999999
Q ss_pred c
Q 012988 395 F 395 (452)
Q Consensus 395 f 395 (452)
+
T Consensus 265 ~ 265 (265)
T cd08217 265 I 265 (265)
T ss_pred C
Confidence 6
No 219
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=1.2e-42 Score=337.80 Aligned_cols=261 Identities=30% Similarity=0.436 Sum_probs=206.9
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC-----
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE----- 159 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~----- 159 (452)
.++|++++.||+|+||.||+|.+..+++.||||++..... .......+.+|+.+++.++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC-cCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 4689999999999999999999999999999998865432 2222345667999999999999999999886543
Q ss_pred ---eEEEEEeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCcc
Q 012988 160 ---YLYLIMEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKP 235 (452)
Q Consensus 160 ---~~~lV~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~ 235 (452)
..|+||||+. ++|..++... ..+++..++.++.|++.||.|||++||+|+||||+|||++.++.+||+|||++..
T Consensus 90 ~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 168 (310)
T cd07865 90 YKGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARA 168 (310)
T ss_pred CCceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCccc
Confidence 4699999995 5888877654 3789999999999999999999999999999999999999999999999999986
Q ss_pred CCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC-CCCc
Q 012988 236 LDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK-GYGM 314 (452)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~-~~~~ 314 (452)
+...... .........++..|+|||++.+. .++.
T Consensus 169 ~~~~~~~---------------------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~ 203 (310)
T cd07865 169 FSLSKNS---------------------------------------------KPNRYTNRVVTLWYRPPELLLGERDYGP 203 (310)
T ss_pred ccCCccc---------------------------------------------CCCCccCcccCccccCcHHhcCCcccCc
Confidence 5321100 00001134678899999998764 4788
Q ss_pred cchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcc-----------------cCCCC-----------CCCChhH
Q 012988 315 ECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHL-----------------KFPDD-----------SKLSPEA 366 (452)
Q Consensus 315 ~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~-----------------~~p~~-----------~~~s~~~ 366 (452)
++||||||+++|+|++|+.||.+.+.......+......+ .+|.. ...+..+
T Consensus 204 ~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 283 (310)
T cd07865 204 PIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHA 283 (310)
T ss_pred hhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHH
Confidence 9999999999999999999998877655444333311110 11110 1135778
Q ss_pred HHHHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 367 KDLICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 367 ~dLi~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
.+||.+||. ||.+|| ++.++++||||
T Consensus 284 ~dli~~~l~~~P~~R~---t~~e~l~h~~f 310 (310)
T cd07865 284 LDLIDKLLVLDPAKRI---DADTALNHDFF 310 (310)
T ss_pred HHHHHHHhcCChhhcc---CHHHHhcCCCC
Confidence 899999999 999999 99999999998
No 220
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.5e-42 Score=333.77 Aligned_cols=254 Identities=30% Similarity=0.545 Sum_probs=215.8
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
.|...+.||.|++|.||++.+..++..+|+|++.... ....+.+.+|+.+++.++||||+++++++...+..|+|+|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e 96 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK---QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVME 96 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc---hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEe
Confidence 4556679999999999999999999999999885432 2234567889999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcc
Q 012988 167 YLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHE 246 (452)
Q Consensus 167 ~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~ 246 (452)
|++|++|.+++.. ..+++..+..++.|++.||.|||++||+||||+|+||+++.++.++|+|||++.......
T Consensus 97 ~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~------ 169 (285)
T cd06648 97 FLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV------ 169 (285)
T ss_pred ccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCC------
Confidence 9999999999876 678999999999999999999999999999999999999999999999999876442110
Q ss_pred ccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHH
Q 012988 247 HKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 326 (452)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ 326 (452)
.......|++.|+|||++.+..++.++|||||||++|
T Consensus 170 -------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ 206 (285)
T cd06648 170 -------------------------------------------PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVI 206 (285)
T ss_pred -------------------------------------------cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHH
Confidence 0011346899999999999888999999999999999
Q ss_pred HhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 327 EMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 327 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
+|++|..||...+.......+... ..........++..+.+||.+||. +|.+|| ++.++++||||+.
T Consensus 207 ell~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp---t~~~il~~~~~~~ 274 (285)
T cd06648 207 EMVDGEPPYFNEPPLQAMKRIRDN-LPPKLKNLHKVSPRLRSFLDRMLVRDPAQRA---TAAELLNHPFLAK 274 (285)
T ss_pred HHHhCCCCCcCCCHHHHHHHHHhc-CCCCCcccccCCHHHHHHHHHHcccChhhCc---CHHHHccCccccc
Confidence 999999999888777666666543 222222223478999999999999 999999 9999999999985
No 221
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=7.8e-43 Score=338.66 Aligned_cols=252 Identities=24% Similarity=0.388 Sum_probs=207.1
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEccCCCE--EEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEEcCC
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREKKSGNI--YAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQDTE 159 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~--vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~ 159 (452)
+..++|++.+.||+|+||.||+|.++.++.. +|+|.+... ........+.+|+.++..+ +||||+++++++.+.+
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~ 81 (303)
T cd05088 4 LEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 81 (303)
T ss_pred cchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc--CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC
Confidence 4567899999999999999999999887765 466665432 2233446788899999999 8999999999999999
Q ss_pred eEEEEEeecCCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCC
Q 012988 160 YLYLIMEYLPGGDMMTLLMRED----------------TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNG 223 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~~~----------------~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g 223 (452)
.+|+||||+++|+|.+++...+ .+++..++.++.|++.||+|||++||+||||||+|||++.++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~ 161 (303)
T cd05088 82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY 161 (303)
T ss_pred CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCC
Confidence 9999999999999999996542 578899999999999999999999999999999999999999
Q ss_pred cEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCcccc
Q 012988 224 HMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIA 303 (452)
Q Consensus 224 ~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~A 303 (452)
.+||+|||+++...... ......++..|+|
T Consensus 162 ~~kl~dfg~~~~~~~~~--------------------------------------------------~~~~~~~~~~y~a 191 (303)
T cd05088 162 VAKIADFGLSRGQEVYV--------------------------------------------------KKTMGRLPVRWMA 191 (303)
T ss_pred cEEeCccccCcccchhh--------------------------------------------------hcccCCCcccccC
Confidence 99999999986321000 0001234667999
Q ss_pred chhccCCCCCccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccC
Q 012988 304 PEVLLKKGYGMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRL 381 (452)
Q Consensus 304 PE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~ 381 (452)
||++.+..++.++|||||||++|+|+| |..||.+.+..+....+.. ....+....+++++.+||.+||. +|.+||
T Consensus 192 PE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 268 (303)
T cd05088 192 IESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ---GYRLEKPLNCDDEVYDLMRQCWREKPYERP 268 (303)
T ss_pred HHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhc---CCcCCCCCCCCHHHHHHHHHHcCCChhhCc
Confidence 999988889999999999999999998 9999988777666655532 11222223578999999999999 999999
Q ss_pred CCCCHHHHhcC
Q 012988 382 GTGGAHQIKAH 392 (452)
Q Consensus 382 ~~~~~~eil~h 392 (452)
++.+++.+
T Consensus 269 ---~~~~il~~ 276 (303)
T cd05088 269 ---SFAQILVS 276 (303)
T ss_pred ---CHHHHHHH
Confidence 89998876
No 222
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.7e-42 Score=333.99 Aligned_cols=256 Identities=28% Similarity=0.421 Sum_probs=203.9
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
.++|++++.||+|+||.||+|.+..+|..||+|++..... ......+.+|+.+++.++|+||+++++++.+.+..|+|
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE--EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc--CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEE
Confidence 4789999999999999999999999999999999865432 22233567899999999999999999999999999999
Q ss_pred EeecCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 165 MEYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
|||+. ++|.+++.. ...+++..++.++.|++.||.|||+.||+||||||+|||++.++.++|+|||+++......
T Consensus 82 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~--- 157 (291)
T cd07870 82 FEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS--- 157 (291)
T ss_pred Eeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCC---
Confidence 99995 677766654 3568888999999999999999999999999999999999999999999999987532110
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchhhhhh
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDWWSLG 322 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~DiwSlG 322 (452)
.......+++.|+|||++.+ ..++.++||||||
T Consensus 158 ----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG 191 (291)
T cd07870 158 ----------------------------------------------QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAG 191 (291)
T ss_pred ----------------------------------------------CCCCCccccccccCCceeecCCCCCcHHHHHHHH
Confidence 00112357899999999875 4578899999999
Q ss_pred HHHHHhhhCCCCCCCCChH-HHHHHHhhccC------------------c---ccCC-------CCCCCChhHHHHHHHh
Q 012988 323 AIMYEMLVGYPPFYADDPI-TTCRKIVHWRN------------------H---LKFP-------DDSKLSPEAKDLICRL 373 (452)
Q Consensus 323 vil~elltG~~Pf~~~~~~-~~~~~i~~~~~------------------~---~~~p-------~~~~~s~~~~dLi~~m 373 (452)
|++|+|++|..||.+.+.. +.+..+..... . ...+ .....+.++.+||.+|
T Consensus 192 ~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 271 (291)
T cd07870 192 CIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQM 271 (291)
T ss_pred HHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHH
Confidence 9999999999999765432 22222211000 0 0000 0011357899999999
Q ss_pred hc-CccccCCCCCHHHHhcCCCc
Q 012988 374 LC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 374 L~-dp~~R~~~~~~~eil~hp~f 395 (452)
|. ||.+|| ++.+++.||||
T Consensus 272 l~~dp~~R~---t~~~~l~h~~~ 291 (291)
T cd07870 272 LMMFPKDRI---SAQDALLHPYF 291 (291)
T ss_pred hCcCcccCc---CHHHHhcCCCC
Confidence 99 999999 99999999998
No 223
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2e-42 Score=328.71 Aligned_cols=252 Identities=23% Similarity=0.348 Sum_probs=212.7
Q ss_pred CCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeE
Q 012988 82 KICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYL 161 (452)
Q Consensus 82 ~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~ 161 (452)
.+...+|.+.+.||.|+||.||+|.++.++..||+|++.... .....+.+|+.+++.++||||+++++++.....+
T Consensus 2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 77 (263)
T cd05052 2 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 77 (263)
T ss_pred CCchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc----hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCc
Confidence 345578999999999999999999999999999999986542 2345678899999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 162 YLIMEYLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
++||||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~ 157 (263)
T cd05052 78 YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 157 (263)
T ss_pred EEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccc
Confidence 9999999999999998653 35889999999999999999999999999999999999999999999999998865321
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhh
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWW 319 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Diw 319 (452)
... ......++..|+|||.+.+..++.++|||
T Consensus 158 ~~~------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~ 189 (263)
T cd05052 158 TYT------------------------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVW 189 (263)
T ss_pred eee------------------------------------------------ccCCCCCccccCCHHHhccCCCCchhHHH
Confidence 100 00112346789999999989999999999
Q ss_pred hhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 320 SLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 320 SlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
||||++|+|++ |..||.+.+..+....+... ...+....++.++.+||.+||. ||.+|| ++.++++
T Consensus 190 slG~il~el~t~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~cl~~~p~~Rp---~~~~l~~ 257 (263)
T cd05052 190 AFGVLLWEIATYGMSPYPGIDLSQVYELLEKG---YRMERPEGCPPKVYELMRACWQWNPSDRP---SFAEIHQ 257 (263)
T ss_pred HHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC---CCCCCCCCCCHHHHHHHHHHccCCcccCC---CHHHHHH
Confidence 99999999998 99999888777766666542 2223334688999999999999 999999 8888764
No 224
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=5.9e-43 Score=344.51 Aligned_cols=261 Identities=28% Similarity=0.468 Sum_probs=208.3
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC-----C
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT-----E 159 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~-----~ 159 (452)
.++|++++.||+|+||.||+|.+..+|+.||+|++.... .......+.+|+.+++.++||||+++++++... .
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE--HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc--cchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence 478999999999999999999999999999999986421 223345677899999999999999999887644 3
Q ss_pred eEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 160 YLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
.+|+||||+. ++|..++ ....+++..++.++.|++.||.|||+.||+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~lv~e~~~-~~l~~~~-~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 159 (336)
T cd07849 82 DVYIVQELME-TDLYKLI-KTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPE 159 (336)
T ss_pred eEEEEehhcc-cCHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecccc
Confidence 5899999995 5888777 4467999999999999999999999999999999999999999999999999998765321
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchh
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDW 318 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~Di 318 (452)
.. .........||+.|+|||++.+ ..++.++||
T Consensus 160 ~~----------------------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv 193 (336)
T cd07849 160 HD----------------------------------------------HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDI 193 (336)
T ss_pred cc----------------------------------------------ccCCcCCcCcCCCccChHHhhCCCCCCcHHHH
Confidence 10 0001123568999999998765 568999999
Q ss_pred hhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCc--------------------cc----CC---CCCCCChhHHHHHH
Q 012988 319 WSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNH--------------------LK----FP---DDSKLSPEAKDLIC 371 (452)
Q Consensus 319 wSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~--------------------~~----~p---~~~~~s~~~~dLi~ 371 (452)
|||||++|+|++|+.||.+.+.......+...... .. .+ ..+.+++++.+||.
T Consensus 194 wslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 273 (336)
T cd07849 194 WSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLD 273 (336)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHH
Confidence 99999999999999999876554433322210000 00 00 01246788999999
Q ss_pred Hhhc-CccccCCCCCHHHHhcCCCcCCC
Q 012988 372 RLLC-DVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 372 ~mL~-dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
+||. ||.+|| ++.+++.||||+..
T Consensus 274 ~~l~~dP~~Rp---t~~e~l~hp~~~~~ 298 (336)
T cd07849 274 KMLTFNPHKRI---TVEEALAHPYLEQY 298 (336)
T ss_pred HHcCCChhhCc---CHHHHhcCcccccc
Confidence 9999 999999 99999999999853
No 225
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=5.7e-43 Score=344.78 Aligned_cols=260 Identities=27% Similarity=0.436 Sum_probs=212.3
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC-----C
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT-----E 159 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~-----~ 159 (452)
.++|.+++.||+|+||+||+|.+..++..||||.+..... .......+.+|+.+++.++|+||+++++++... .
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD-NRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc-ccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 3579999999999999999999999999999999875422 223345677899999999999999999988654 3
Q ss_pred eEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 160 YLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
.+|+||||+. ++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 161 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEK 161 (337)
T ss_pred cEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCC
Confidence 5899999994 789999988888999999999999999999999999999999999999999999999999998765311
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchh
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDW 318 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~Di 318 (452)
. .......||..|+|||.+.+ ..++.++||
T Consensus 162 ~-------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 192 (337)
T cd07858 162 G-------------------------------------------------DFMTEYVVTRWYRAPELLLNCSEYTTAIDV 192 (337)
T ss_pred c-------------------------------------------------ccccccccccCccChHHHhcCCCCCCcccH
Confidence 0 00113467889999999875 468999999
Q ss_pred hhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCc--------------------------ccC-CCCCCCChhHHHHHH
Q 012988 319 WSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNH--------------------------LKF-PDDSKLSPEAKDLIC 371 (452)
Q Consensus 319 wSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~--------------------------~~~-p~~~~~s~~~~dLi~ 371 (452)
|||||++|+|++|++||.+.+.......+...... ..+ .....+++++.+||.
T Consensus 193 wslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 272 (337)
T cd07858 193 WSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLE 272 (337)
T ss_pred HHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHH
Confidence 99999999999999999876654433333211000 000 011357899999999
Q ss_pred Hhhc-CccccCCCCCHHHHhcCCCcCCC
Q 012988 372 RLLC-DVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 372 ~mL~-dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
+||+ ||.+|| ++.++++||||+.+
T Consensus 273 ~~l~~~P~~Rp---s~~ell~h~~~~~~ 297 (337)
T cd07858 273 KMLVFDPSKRI---TVEEALAHPYLASL 297 (337)
T ss_pred HHhcCChhhcc---CHHHHHcCcchhhh
Confidence 9999 999999 99999999999865
No 226
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=6.1e-43 Score=338.49 Aligned_cols=254 Identities=32% Similarity=0.564 Sum_probs=214.6
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
.|.....||.|+||.||+|.+..++..||+|++..... .....+.+|+.+++.++||||+++++++...+..|+|||
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e 98 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLME 98 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc---chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEe
Confidence 35556689999999999999999999999999865422 234567889999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcc
Q 012988 167 YLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHE 246 (452)
Q Consensus 167 ~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~ 246 (452)
|+++++|..++.. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++..+....
T Consensus 99 ~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~------ 171 (297)
T cd06659 99 FLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV------ 171 (297)
T ss_pred cCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhccccc------
Confidence 9999999987744 578999999999999999999999999999999999999999999999999987542110
Q ss_pred ccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHH
Q 012988 247 HKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 326 (452)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ 326 (452)
.......|++.|+|||++.+..++.++|||||||++|
T Consensus 172 -------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ 208 (297)
T cd06659 172 -------------------------------------------PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVI 208 (297)
T ss_pred -------------------------------------------ccccceecCccccCHHHHccCCCCchhhHHHHHHHHH
Confidence 0011356899999999999888999999999999999
Q ss_pred HhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 327 EMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 327 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
+|++|+.||...+.......+... ..........++..+.++|.+||+ +|.+|| ++.++++||||.+
T Consensus 209 el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rp---s~~~ll~~~~~~~ 276 (297)
T cd06659 209 EMVDGEPPYFSDSPVQAMKRLRDS-PPPKLKNAHKISPVLRDFLERMLTREPQERA---TAQELLDHPFLLQ 276 (297)
T ss_pred HHHhCCCCCCCCCHHHHHHHHhcc-CCCCccccCCCCHHHHHHHHHHhcCCcccCc---CHHHHhhChhhcc
Confidence 999999999888776666555432 111222233578899999999999 999999 9999999999974
No 227
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=6.6e-43 Score=337.24 Aligned_cols=256 Identities=33% Similarity=0.505 Sum_probs=211.3
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC--CeEE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT--EYLY 162 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~--~~~~ 162 (452)
.++|++.+.||.|+||.||+|.+..+++.+|+|.++..... ......+.+|+.+++.++||||+++++++... +.+|
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence 36799999999999999999999999999999999755332 23334567899999999999999999999877 8999
Q ss_pred EEEeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 163 LIMEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 163 lV~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
+||||++ ++|.+++... ..+++..++.++.|++.||.|||++||+|+||||+|||++.+|.++|+|||++..+....
T Consensus 83 lv~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~- 160 (293)
T cd07843 83 MVMEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL- 160 (293)
T ss_pred EEehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc-
Confidence 9999996 5999888664 458999999999999999999999999999999999999999999999999988653210
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC-CCCccchhhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK-GYGMECDWWS 320 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~-~~~~~~DiwS 320 (452)
.......+++.|+|||++.+. .++.++||||
T Consensus 161 ------------------------------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s 192 (293)
T cd07843 161 ------------------------------------------------KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWS 192 (293)
T ss_pred ------------------------------------------------cccccccccccccCchhhcCCccccchhhHHH
Confidence 001123578899999998764 4689999999
Q ss_pred hhHHHHHhhhCCCCCCCCChHHHHHHHhhccCc-----------------------------ccCCCCCCCChhHHHHHH
Q 012988 321 LGAIMYEMLVGYPPFYADDPITTCRKIVHWRNH-----------------------------LKFPDDSKLSPEAKDLIC 371 (452)
Q Consensus 321 lGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~-----------------------------~~~p~~~~~s~~~~dLi~ 371 (452)
||+++|+|++|.+||...+....+.++...... -.++. ..+++.+.+||.
T Consensus 193 lG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~ 271 (293)
T cd07843 193 VGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPA-LSLSDNGFDLLN 271 (293)
T ss_pred HHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccc-cCCChHHHHHHH
Confidence 999999999999999887776665554321100 00111 015888999999
Q ss_pred Hhhc-CccccCCCCCHHHHhcCCCc
Q 012988 372 RLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 372 ~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
+||+ ||++|| ++.|++.||||
T Consensus 272 ~~l~~~p~~R~---t~~ell~~~~f 293 (293)
T cd07843 272 RLLTYDPAKRI---SAEDALKHPYF 293 (293)
T ss_pred HHhccCccccC---CHHHHhcCCCC
Confidence 9999 999999 99999999998
No 228
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.4e-42 Score=333.02 Aligned_cols=254 Identities=32% Similarity=0.526 Sum_probs=210.3
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
+|++++.||.|++|+||+|.+..+|..||+|++..... ......+.+|+.+++.++|+||+++++++.+.+..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE--EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc--ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence 58999999999999999999999999999999876532 2234567789999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 167 YLPGGDMMTLLMRE---DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 167 ~~~ggsL~~~l~~~---~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
|+++ +|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||++++++.++|+|||++.......
T Consensus 79 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~--- 154 (284)
T cd07836 79 YMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV--- 154 (284)
T ss_pred cCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc---
Confidence 9974 888887653 368999999999999999999999999999999999999999999999999987543110
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchhhhhh
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDWWSLG 322 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~DiwSlG 322 (452)
.......+|+.|+|||++.+ ..++.++||||||
T Consensus 155 ----------------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG 188 (284)
T cd07836 155 ----------------------------------------------NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVG 188 (284)
T ss_pred ----------------------------------------------cccccccccccccChHHhcCCCCCCcHHHHHHHH
Confidence 00113457889999999866 4568999999999
Q ss_pred HHHHHhhhCCCCCCCCChHHHHHHHhhccCc----------------ccCCC---------CCCCChhHHHHHHHhhc-C
Q 012988 323 AIMYEMLVGYPPFYADDPITTCRKIVHWRNH----------------LKFPD---------DSKLSPEAKDLICRLLC-D 376 (452)
Q Consensus 323 vil~elltG~~Pf~~~~~~~~~~~i~~~~~~----------------~~~p~---------~~~~s~~~~dLi~~mL~-d 376 (452)
|++|+|++|..||.+.+..+....+...... ..+|. .+.++..++++|.+||+ |
T Consensus 189 ~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 268 (284)
T cd07836 189 CIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLN 268 (284)
T ss_pred HHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCC
Confidence 9999999999999888776665554431100 00010 12457889999999998 9
Q ss_pred ccccCCCCCHHHHhcCCCc
Q 012988 377 VEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 377 p~~R~~~~~~~eil~hp~f 395 (452)
|.+|+ ++.++++||||
T Consensus 269 p~~R~---~~~~~l~~~~f 284 (284)
T cd07836 269 PELRI---SAHDALQHPWF 284 (284)
T ss_pred cccCC---CHHHHhcCCCC
Confidence 99999 99999999998
No 229
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.4e-42 Score=330.00 Aligned_cols=252 Identities=29% Similarity=0.507 Sum_probs=209.6
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++.+.||+|+||.||+|+++.+++.||||++.............+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 68999999999999999999999999999999887644444445567888999999999999999999999999999999
Q ss_pred eecCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 166 EYLPGGDMMTLLMR----EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 166 E~~~ggsL~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
||+++|+|.+++.. ...+++..+..++.|++.||.|||++||+|+||||+|||++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~- 160 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT- 160 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchh-
Confidence 99999999988853 3458999999999999999999999999999999999999999999999999987653110
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSL 321 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSl 321 (452)
.......|++.|+|||.+.+..++.++|+|||
T Consensus 161 ------------------------------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~sl 192 (267)
T cd08228 161 ------------------------------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSL 192 (267)
T ss_pred ------------------------------------------------HHHhcCCCCccccChhhhccCCCCchhhHHHH
Confidence 00113468899999999998889999999999
Q ss_pred hHHHHHhhhCCCCCCCCCh--HHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 322 GAIMYEMLVGYPPFYADDP--ITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 322 Gvil~elltG~~Pf~~~~~--~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
|+++|+|++|+.||..... ......+.. ......+. ..++..+.+||.+||. +|.+|| ++.++++
T Consensus 193 G~~l~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~li~~cl~~~p~~Rp---~~~~vl~ 260 (267)
T cd08228 193 GCLLYEMAALQSPFYGDKMNLFSLCQKIEQ-CDYPPLPT-EHYSEKLRELVSMCIYPDPDQRP---DIGYVHQ 260 (267)
T ss_pred HHHHHHHhcCCCCCccccccHHHHHHHHhc-CCCCCCCh-hhcCHHHHHHHHHHCCCCcccCc---CHHHHHH
Confidence 9999999999999976532 233333322 11112221 2567899999999999 999999 8999885
No 230
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=2.3e-42 Score=328.97 Aligned_cols=255 Identities=31% Similarity=0.501 Sum_probs=207.3
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEE
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYL 163 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~l 163 (452)
..+.+.....||+|+||.||+|.+..++..||+|.+.... ....+.+.+|+.+++.++|+||+++++++...+.+++
T Consensus 6 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 6 EYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD---SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred ccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC---HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 3455555678999999999999999999999999886542 2234678899999999999999999999999999999
Q ss_pred EEeecCCCChHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECC-CCcEEEeeccCCccCCCC
Q 012988 164 IMEYLPGGDMMTLLMRE-DTL--TENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDK-NGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 164 V~E~~~ggsL~~~l~~~-~~~--~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~-~g~ikl~DFGla~~~~~~ 239 (452)
||||+++++|.+++... ..+ ++..+..++.|++.||.|||++||+||||||+||+++. ++.++|+|||++......
T Consensus 83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~ 162 (268)
T cd06624 83 FMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGI 162 (268)
T ss_pred EEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccC
Confidence 99999999999999764 455 78889999999999999999999999999999999986 679999999998754211
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCC--CCccch
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKG--YGMECD 317 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~--~~~~~D 317 (452)
. .......|++.|+|||++.+.. ++.++|
T Consensus 163 ~-------------------------------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~~D 193 (268)
T cd06624 163 N-------------------------------------------------PCTETFTGTLQYMAPEVIDKGPRGYGAPAD 193 (268)
T ss_pred C-------------------------------------------------CccccCCCCccccChhhhccccccCCchhh
Confidence 0 0011235889999999987643 788999
Q ss_pred hhhhhHHHHHhhhCCCCCCCCChHH-HHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 318 WWSLGAIMYEMLVGYPPFYADDPIT-TCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 318 iwSlGvil~elltG~~Pf~~~~~~~-~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
+||||+++|+|++|..||....... ....+........+| ..+++++++||.+||. +|.+|| ++.+++.||||
T Consensus 194 v~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rp---t~~~ll~~~~~ 268 (268)
T cd06624 194 IWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIP--ESLSAEAKNFILRCFEPDPDKRA---SAHDLLQDPFL 268 (268)
T ss_pred hHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCC--cccCHHHHHHHHHHcCCCchhCC---CHHHHHhCCCC
Confidence 9999999999999999997644322 121221112222333 3578999999999999 999999 99999999997
No 231
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.5e-42 Score=368.23 Aligned_cols=265 Identities=24% Similarity=0.352 Sum_probs=204.8
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|+++++||+|+||.||+|.+..+|+.||+|++............++.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 68999999999999999999999999999999997643333334567889999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCc
Q 012988 166 EYLPGGDMMTLLMRE-----------DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCK 234 (452)
Q Consensus 166 E~~~ggsL~~~l~~~-----------~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~ 234 (452)
||++||+|.+++... ..++...+..++.|++.||.|||++||+||||||+|||++.+|.++|+|||+++
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk 161 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAI 161 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcce
Confidence 999999999998641 234456678899999999999999999999999999999999999999999998
Q ss_pred cCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCc
Q 012988 235 PLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGM 314 (452)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~ 314 (452)
.......... +.....+ + .. ..........+||+.|+|||++.+..++.
T Consensus 162 ~i~~~~~~~~---------------~l~~~~~--~--s~------------~s~~t~~g~~vGT~~YmAPE~l~g~~~S~ 210 (932)
T PRK13184 162 FKKLEEEDLL---------------DIDVDER--N--IC------------YSSMTIPGKIVGTPDYMAPERLLGVPASE 210 (932)
T ss_pred eccccccccc---------------ccccccc--c--cc------------ccccccCCCCCCCCCCCCHHHhcCCCCCc
Confidence 6521110000 0000000 0 00 00001112457999999999999999999
Q ss_pred cchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCC
Q 012988 315 ECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLG 382 (452)
Q Consensus 315 ~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~ 382 (452)
++|||||||++|||++|..||...+.......... ...........+++.+.+++.+||. ||.+|++
T Consensus 211 kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i-~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~s 278 (932)
T PRK13184 211 STDIYALGVILYQMLTLSFPYRRKKGRKISYRDVI-LSPIEVAPYREIPPFLSQIAMKALAVDPAERYS 278 (932)
T ss_pred HhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhc-cChhhccccccCCHHHHHHHHHHccCChhhCcC
Confidence 99999999999999999999987554433222111 1122222234678999999999999 9999984
No 232
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=8.6e-43 Score=333.78 Aligned_cols=256 Identities=30% Similarity=0.466 Sum_probs=216.9
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
..|+.++.||.|+||.||+|.+..++..||+|++..... ......+.+|+.+++.+.||||+++++++.+...+|+||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 358889999999999999999999999999999875432 233567889999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
||++||+|.+++.. +.+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++..+....
T Consensus 82 e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~----- 155 (277)
T cd06640 82 EYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ----- 155 (277)
T ss_pred ecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc-----
Confidence 99999999998854 578999999999999999999999999999999999999999999999999987543110
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 325 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil 325 (452)
.......|+..|+|||++.+..++.++|+|||||++
T Consensus 156 --------------------------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il 191 (277)
T cd06640 156 --------------------------------------------IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITA 191 (277)
T ss_pred --------------------------------------------cccccccCcccccCHhHhccCCCccHHHHHHHHHHH
Confidence 001124588899999999988899999999999999
Q ss_pred HHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCCC
Q 012988 326 YEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDVV 399 (452)
Q Consensus 326 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~~ 399 (452)
|+|++|..||...++......+... .....+ ..++..+.+||.+||. +|.+|| ++.+++.||||....
T Consensus 192 ~el~tg~~p~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~li~~~l~~~p~~Rp---~~~~il~~~~~~~~~ 260 (277)
T cd06640 192 IELAKGEPPNSDMHPMRVLFLIPKN-NPPTLT--GEFSKPFKEFIDACLNKDPSFRP---TAKELLKHKFIVKNA 260 (277)
T ss_pred HHHHHCCCCCCCcChHhHhhhhhcC-CCCCCc--hhhhHHHHHHHHHHcccCcccCc---CHHHHHhChHhhhcc
Confidence 9999999999887766555444321 111222 2467899999999998 999999 999999999997654
No 233
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.3e-42 Score=348.68 Aligned_cols=258 Identities=23% Similarity=0.317 Sum_probs=207.9
Q ss_pred cCCCCCCCeeEeceeccCCCeEEEEEEEccC-----CCEEEEEEeecchhcccchHHHHHHHHHHHHHhC-CCceeeEEE
Q 012988 80 RHKICVDDFELLTIIGRGAFGEVRLCREKKS-----GNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVA-SHCIVKLYY 153 (452)
Q Consensus 80 ~~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~ 153 (452)
+..+..++|++++.||+|+||.||+|.+... +..||||++.... .....+.+.+|+.+++.+. ||||+++++
T Consensus 31 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~ 108 (400)
T cd05105 31 RWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLG 108 (400)
T ss_pred ceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEE
Confidence 5567788999999999999999999987433 3479999986542 2233467889999999996 999999999
Q ss_pred EEEcCCeEEEEEeecCCCChHHHHHhc-----------------------------------------------------
Q 012988 154 SFQDTEYLYLIMEYLPGGDMMTLLMRE----------------------------------------------------- 180 (452)
Q Consensus 154 ~~~~~~~~~lV~E~~~ggsL~~~l~~~----------------------------------------------------- 180 (452)
++.+.+.+|||||||++|+|.+++...
T Consensus 109 ~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (400)
T cd05105 109 ACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQY 188 (400)
T ss_pred EEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccccccc
Confidence 999999999999999999999988542
Q ss_pred -------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcE
Q 012988 181 -------------------------------------------DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNL 217 (452)
Q Consensus 181 -------------------------------------------~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NI 217 (452)
..+++..+..++.|++.||.|||+.||+||||||+||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Ni 268 (400)
T cd05105 189 VPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNV 268 (400)
T ss_pred chhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhE
Confidence 1367778889999999999999999999999999999
Q ss_pred EECCCCcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhcccccccccc
Q 012988 218 LLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVG 297 (452)
Q Consensus 218 Ll~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 297 (452)
|++.++.+||+|||+++.+..... ........|
T Consensus 269 ll~~~~~~kL~DfGla~~~~~~~~-----------------------------------------------~~~~~~~~~ 301 (400)
T cd05105 269 LLAQGKIVKICDFGLARDIMHDSN-----------------------------------------------YVSKGSTFL 301 (400)
T ss_pred EEeCCCEEEEEeCCcceecccccc-----------------------------------------------ccccCCcCC
Confidence 999999999999999886431100 000113457
Q ss_pred CCccccchhccCCCCCccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-
Q 012988 298 TPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC- 375 (452)
Q Consensus 298 t~~y~APE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~- 375 (452)
++.|+|||++.+..++.++|||||||++|+|++ |..||........+........ ..+....++.++.+||.+||.
T Consensus 302 ~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~ 379 (400)
T cd05105 302 PVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGY--RMAKPDHATQEVYDIMVKCWNS 379 (400)
T ss_pred CcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCC--CCCCCccCCHHHHHHHHHHCcc
Confidence 789999999999999999999999999999997 9999987554433333333222 233334688999999999999
Q ss_pred CccccCCCCCHHHHhc
Q 012988 376 DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 376 dp~~R~~~~~~~eil~ 391 (452)
||.+|| ++.+|.+
T Consensus 380 dP~~RP---t~~~l~~ 392 (400)
T cd05105 380 EPEKRP---SFLHLSD 392 (400)
T ss_pred CHhHCc---CHHHHHH
Confidence 999999 7766654
No 234
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.4e-42 Score=338.26 Aligned_cols=259 Identities=27% Similarity=0.436 Sum_probs=205.6
Q ss_pred CeeEeceeccCCCeEEEEEEEcc--CCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC--CeEE
Q 012988 87 DFELLTIIGRGAFGEVRLCREKK--SGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT--EYLY 162 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~--~~~~ 162 (452)
.|++++.||+|+||.||+|.++. ++..||+|++.............+.+|+.+++.++||||+++++++.+. ..+|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 48999999999999999999988 8999999999875433334456678899999999999999999999988 8899
Q ss_pred EEEeecCCCChHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECC----CCcEEEeeccCC
Q 012988 163 LIMEYLPGGDMMTLLMRE-----DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDK----NGHMKLSDFGLC 233 (452)
Q Consensus 163 lV~E~~~ggsL~~~l~~~-----~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~----~g~ikl~DFGla 233 (452)
+||||++ ++|.+++... ..+++..++.++.|++.||.|||+.||+||||||+|||++. +|.+||+|||++
T Consensus 81 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 81 LLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 9999996 4677766432 36899999999999999999999999999999999999999 899999999998
Q ss_pred ccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCC
Q 012988 234 KPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGY 312 (452)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~ 312 (452)
..+...... .......+||+.|+|||++.+ ..+
T Consensus 160 ~~~~~~~~~----------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~ 193 (316)
T cd07842 160 RLFNAPLKP----------------------------------------------LADLDPVVVTIWYRAPELLLGARHY 193 (316)
T ss_pred cccCCCccc----------------------------------------------ccccCCccccccccCHHHHhCCCCC
Confidence 865321100 001123568999999998876 457
Q ss_pred CccchhhhhhHHHHHhhhCCCCCCCCChHH---------HHHHHhh------------------------ccCcccCCC-
Q 012988 313 GMECDWWSLGAIMYEMLVGYPPFYADDPIT---------TCRKIVH------------------------WRNHLKFPD- 358 (452)
Q Consensus 313 ~~~~DiwSlGvil~elltG~~Pf~~~~~~~---------~~~~i~~------------------------~~~~~~~p~- 358 (452)
+.++|||||||++|+|++|++||.+..... .+..+.. ......++.
T Consensus 194 ~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (316)
T cd07842 194 TKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSN 273 (316)
T ss_pred CcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCc
Confidence 999999999999999999999997654322 1111110 000011110
Q ss_pred --------CCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 359 --------DSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 359 --------~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
....+.++.++|.+||. ||.+|| ++.+++.||||
T Consensus 274 ~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp---s~~eil~~~~f 316 (316)
T cd07842 274 SLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRI---TAEEALEHPYF 316 (316)
T ss_pred cHHHHHHhccCCCHHHHHHHHHHhcCCcccCc---CHHHHhcCCCC
Confidence 01466789999999999 999999 99999999998
No 235
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.4e-42 Score=331.41 Aligned_cols=257 Identities=32% Similarity=0.490 Sum_probs=210.7
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC--CeEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT--EYLYL 163 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~--~~~~l 163 (452)
++|+.++.||.|++|.||+|.+..+++.||+|++..... ......+.+|+++++.++||||++++++|.+. +.+|+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 78 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN--PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGI 78 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc--hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEE
Confidence 479999999999999999999999999999999875422 23346688899999999999999999998653 47899
Q ss_pred EEeecCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 164 IMEYLPGGDMMTLLMR----EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 164 V~E~~~ggsL~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
||||+++++|.+++.. ...+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 158 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS 158 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence 9999999999988643 356899999999999999999999999999999999999999999999999998754211
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhh
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWW 319 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Diw 319 (452)
. .....++..|+|||.+.+..++.++|||
T Consensus 159 ~---------------------------------------------------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~ 187 (287)
T cd06621 159 L---------------------------------------------------AGTFTGTSFYMAPERIQGKPYSITSDVW 187 (287)
T ss_pred c---------------------------------------------------cccccCCccccCHHHhcCCCCCchhhHH
Confidence 0 0123578889999999999999999999
Q ss_pred hhhHHHHHhhhCCCCCCCCC-----hHHHHHHHhhccCcccCCCC----CCCChhHHHHHHHhhc-CccccCCCCCHHHH
Q 012988 320 SLGAIMYEMLVGYPPFYADD-----PITTCRKIVHWRNHLKFPDD----SKLSPEAKDLICRLLC-DVEHRLGTGGAHQI 389 (452)
Q Consensus 320 SlGvil~elltG~~Pf~~~~-----~~~~~~~i~~~~~~~~~p~~----~~~s~~~~dLi~~mL~-dp~~R~~~~~~~ei 389 (452)
||||++|+|++|..||.... ..+....+... ....++.. ...++.+.+||.+||. +|.+|| ++.|+
T Consensus 188 slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~ei 263 (287)
T cd06621 188 SLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM-PNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRP---TPWDM 263 (287)
T ss_pred HHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcC-CchhhccCCCCCCchHHHHHHHHHHHcCCCcccCC---CHHHH
Confidence 99999999999999997652 23333333321 11122211 2346789999999998 999999 99999
Q ss_pred hcCCCcCCCC
Q 012988 390 KAHPWFKDVV 399 (452)
Q Consensus 390 l~hp~f~~~~ 399 (452)
+.||||....
T Consensus 264 l~~~~~~~~~ 273 (287)
T cd06621 264 LEHPWIKAQM 273 (287)
T ss_pred HhCccccccc
Confidence 9999997543
No 236
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2e-42 Score=332.23 Aligned_cols=254 Identities=21% Similarity=0.391 Sum_probs=209.3
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEc----cCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREK----KSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE 159 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~ 159 (452)
..++|++.+.||+|+||+||+|... .++..||+|.+.... .......+.+|+.+++.++||||+++++++....
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 80 (283)
T cd05090 3 PLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN--NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ 80 (283)
T ss_pred ChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC
Confidence 3578999999999999999999853 356789999886432 2233467888999999999999999999999999
Q ss_pred eEEEEEeecCCCChHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCC
Q 012988 160 YLYLIMEYLPGGDMMTLLMRE-----------------DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKN 222 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~~-----------------~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~ 222 (452)
..|+||||+++|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.+
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~ 160 (283)
T cd05090 81 PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQ 160 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCC
Confidence 999999999999999998532 247788899999999999999999999999999999999999
Q ss_pred CcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccc
Q 012988 223 GHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYI 302 (452)
Q Consensus 223 g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~ 302 (452)
+.+||+|||+++........ .......++..|+
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~y~ 193 (283)
T cd05090 161 LHVKISDLGLSREIYSADYY-----------------------------------------------RVQPKSLLPIRWM 193 (283)
T ss_pred CcEEeccccccccccCCcce-----------------------------------------------ecccCCCccceec
Confidence 99999999999865321100 0011334677899
Q ss_pred cchhccCCCCCccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-Ccccc
Q 012988 303 APEVLLKKGYGMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHR 380 (452)
Q Consensus 303 APE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R 380 (452)
|||++.+..++.++|||||||++|+|++ |..||.+.+.......+.. ...+ +.+..+++.++++|.+||+ ||.+|
T Consensus 194 aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~li~~cl~~~p~~R 270 (283)
T cd05090 194 PPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRK-RQLL--PCSEDCPPRMYSLMTECWQEGPSRR 270 (283)
T ss_pred ChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-CCcC--CCCCCCCHHHHHHHHHHcccCcccC
Confidence 9999998889999999999999999998 9999988776665555543 2222 3334688999999999999 99999
Q ss_pred CCCCCHHHHhcC
Q 012988 381 LGTGGAHQIKAH 392 (452)
Q Consensus 381 ~~~~~~~eil~h 392 (452)
| ++.+|+++
T Consensus 271 p---~~~~i~~~ 279 (283)
T cd05090 271 P---RFKDIHTR 279 (283)
T ss_pred c---CHHHHHHH
Confidence 9 88888764
No 237
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=6.6e-43 Score=343.86 Aligned_cols=263 Identities=28% Similarity=0.446 Sum_probs=213.1
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEc----CCeE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQD----TEYL 161 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~----~~~~ 161 (452)
++|++.+.||.|+||.||+|.++.+|..||+|++..... .......+.+|+.+++.++||||++++++|.. ...+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-VPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-cccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 689999999999999999999999999999999875432 22345667789999999999999999988763 4578
Q ss_pred EEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 162 YLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
|+||||+ +|+|..++.....+++..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||++........
T Consensus 84 ~lv~e~~-~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 162 (334)
T cd07855 84 YVVMDLM-ESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPT 162 (334)
T ss_pred EEEEehh-hhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCc
Confidence 9999999 468999998778899999999999999999999999999999999999999999999999999876532110
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchhhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDWWS 320 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~DiwS 320 (452)
. ........+|+..|+|||++.+ ..++.++||||
T Consensus 163 ~---------------------------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~s 197 (334)
T cd07855 163 E---------------------------------------------HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWS 197 (334)
T ss_pred C---------------------------------------------CCcccccccccccccChHHhcCCcccccccchHH
Confidence 0 0001123478999999999866 55899999999
Q ss_pred hhHHHHHhhhCCCCCCCCChHHHHHHHhhccC------------------------cccCCC---CCCCChhHHHHHHHh
Q 012988 321 LGAIMYEMLVGYPPFYADDPITTCRKIVHWRN------------------------HLKFPD---DSKLSPEAKDLICRL 373 (452)
Q Consensus 321 lGvil~elltG~~Pf~~~~~~~~~~~i~~~~~------------------------~~~~p~---~~~~s~~~~dLi~~m 373 (452)
|||++|+|++|+.||.+.+.......+....+ ....+. ...++.++.++|.+|
T Consensus 198 lG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 277 (334)
T cd07855 198 VGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQM 277 (334)
T ss_pred HHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHH
Confidence 99999999999999987765544433322100 000000 124689999999999
Q ss_pred hc-CccccCCCCCHHHHhcCCCcCCC
Q 012988 374 LC-DVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 374 L~-dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
|+ +|.+|| ++.+++.||||+..
T Consensus 278 l~~~P~~Rp---t~~~~l~~~~~~~~ 300 (334)
T cd07855 278 LQFDPEERI---TVEQALQHPFLAQY 300 (334)
T ss_pred ccCChhhCc---CHHHHHhChhhhhc
Confidence 99 999999 99999999999843
No 238
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.7e-42 Score=332.04 Aligned_cols=251 Identities=30% Similarity=0.509 Sum_probs=204.7
Q ss_pred eeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhC-CCceeeEEEEEEcC--CeEEEE
Q 012988 88 FELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVA-SHCIVKLYYSFQDT--EYLYLI 164 (452)
Q Consensus 88 y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~~~--~~~~lV 164 (452)
|++++.||+|+||.||+|.+..++..||+|++++... .. ......+|+.++..+. |+||+++++++.+. +.+++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK-SL-EQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC-Cc-hhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 6789999999999999999999999999999865421 11 1223456888888885 99999999999987 899999
Q ss_pred EeecCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 165 MEYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
|||++ |+|.+.+.. ...+++..+..++.|++.||.|||+.||+||||||+||+++. +.+||+|||+++.+....
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~--- 153 (282)
T cd07831 79 FELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP--- 153 (282)
T ss_pred EecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCC---
Confidence 99996 578887765 357899999999999999999999999999999999999999 999999999987653110
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchhhhhh
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDWWSLG 322 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~DiwSlG 322 (452)
......+++.|+|||++.. ..++.++||||||
T Consensus 154 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG 186 (282)
T cd07831 154 -----------------------------------------------PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVG 186 (282)
T ss_pred -----------------------------------------------CcCCCCCCcccCChhHhhcCCCCCcchhHHHHH
Confidence 0112357889999998754 4568899999999
Q ss_pred HHHHHhhhCCCCCCCCChHHHHHHHhhccC----------------cccCCC---------CCCCChhHHHHHHHhhc-C
Q 012988 323 AIMYEMLVGYPPFYADDPITTCRKIVHWRN----------------HLKFPD---------DSKLSPEAKDLICRLLC-D 376 (452)
Q Consensus 323 vil~elltG~~Pf~~~~~~~~~~~i~~~~~----------------~~~~p~---------~~~~s~~~~dLi~~mL~-d 376 (452)
|++|+|++|.+||.+.+..+....+..... ...+|. ...++.++.+||.+||. +
T Consensus 187 v~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 266 (282)
T cd07831 187 CVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYD 266 (282)
T ss_pred HHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccC
Confidence 999999999999988776665554432111 111211 12468999999999999 9
Q ss_pred ccccCCCCCHHHHhcCCCc
Q 012988 377 VEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 377 p~~R~~~~~~~eil~hp~f 395 (452)
|.+|| ++.+++.||||
T Consensus 267 P~~R~---~~~~~l~~~~~ 282 (282)
T cd07831 267 PDERI---TAKQALRHPYF 282 (282)
T ss_pred ccccc---CHHHHhhCCCC
Confidence 99999 99999999998
No 239
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=2.6e-42 Score=327.26 Aligned_cols=251 Identities=24% Similarity=0.392 Sum_probs=210.9
Q ss_pred CCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeE
Q 012988 82 KICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYL 161 (452)
Q Consensus 82 ~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~ 161 (452)
.+..++|+++++||+|+||.||+|... ++..||+|.+..... ..+.+.+|+.+++.++|+||+++++++.+.+..
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 76 (261)
T cd05072 2 EIPRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTM----SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPI 76 (261)
T ss_pred cCchHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCch----hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence 456689999999999999999999864 567799998765322 246788999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 162 YLIMEYLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
++||||+++|+|.+++... ..++...+..++.|++.||.|||+.|++||||||+||+++.++.++|+|||++......
T Consensus 77 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 77 YIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 156 (261)
T ss_pred EEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCC
Confidence 9999999999999998653 56888899999999999999999999999999999999999999999999999865321
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhh
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWW 319 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Diw 319 (452)
.. .......++..|+|||++.+..++.++|||
T Consensus 157 ~~------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 188 (261)
T cd05072 157 EY------------------------------------------------TAREGAKFPIKWTAPEAINFGSFTIKSDVW 188 (261)
T ss_pred ce------------------------------------------------eccCCCccceecCCHHHhccCCCChhhhhh
Confidence 10 000123466789999999988899999999
Q ss_pred hhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 320 SLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 320 SlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
||||++|+|++ |..||...........+... ...|....++.++.+||.+||. +|.+|| +++++.+
T Consensus 189 slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~i~~ 256 (261)
T cd05072 189 SFGILLYEIVTYGKIPYPGMSNSDVMSALQRG---YRMPRMENCPDELYDIMKTCWKEKAEERP---TFDYLQS 256 (261)
T ss_pred hhHHHHHHHHccCCCCCCCCCHHHHHHHHHcC---CCCCCCCCCCHHHHHHHHHHccCCcccCc---CHHHHHH
Confidence 99999999998 99999888777766666532 2334444688999999999999 999999 7877753
No 240
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.7e-42 Score=342.13 Aligned_cols=257 Identities=30% Similarity=0.498 Sum_probs=212.1
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC----
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE---- 159 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~---- 159 (452)
..++|++++.||+|+||.||+|.+..+|..||||++.+.. ........+.+|+.+++.++||||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 3578999999999999999999999999999999986532 22223456788999999999999999999987654
Q ss_pred --eEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCC
Q 012988 160 --YLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLD 237 (452)
Q Consensus 160 --~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~ 237 (452)
.+|+||||+ +++|..++. ...+++..++.++.|++.||.|||+.||+||||||+|||++.++.++|+|||++....
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~ 169 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMK-HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTD 169 (343)
T ss_pred cceEEEEEecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccc
Confidence 468999999 789988875 4679999999999999999999999999999999999999999999999999987542
Q ss_pred CCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccc
Q 012988 238 CSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMEC 316 (452)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~ 316 (452)
.. .....|++.|+|||++.+ ..++.++
T Consensus 170 ~~----------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~ 197 (343)
T cd07880 170 SE----------------------------------------------------MTGYVVTRWYRAPEVILNWMHYTQTV 197 (343)
T ss_pred cC----------------------------------------------------ccccccCCcccCHHHHhCCCCCCcHH
Confidence 11 012357889999999876 4578999
Q ss_pred hhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCccc------------------CC---------CCCCCChhHHHH
Q 012988 317 DWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLK------------------FP---------DDSKLSPEAKDL 369 (452)
Q Consensus 317 DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~------------------~p---------~~~~~s~~~~dL 369 (452)
|+|||||++|+|++|..||.+.+....+..+........ .| ....+++.+.+|
T Consensus 198 Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 277 (343)
T cd07880 198 DIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNV 277 (343)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHH
Confidence 999999999999999999988776555554433111100 00 013578899999
Q ss_pred HHHhhc-CccccCCCCCHHHHhcCCCcCCC
Q 012988 370 ICRLLC-DVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 370 i~~mL~-dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
|.+||+ ||.+|+ ++.+++.||||+..
T Consensus 278 i~~~l~~dP~~R~---t~~~~l~~~~~~~~ 304 (343)
T cd07880 278 LEKMLVLDAESRI---TAAEALAHPYFEEF 304 (343)
T ss_pred HHHHcCCChhhCC---CHHHHhcCccHhhh
Confidence 999999 999999 99999999999864
No 241
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.8e-42 Score=331.54 Aligned_cols=256 Identities=17% Similarity=0.259 Sum_probs=209.0
Q ss_pred CCCCCCeeEeceeccCCCeEEEEEEEcc-----CCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEE
Q 012988 82 KICVDDFELLTIIGRGAFGEVRLCREKK-----SGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQ 156 (452)
Q Consensus 82 ~~~~~~y~i~~~LG~G~~g~V~~a~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~ 156 (452)
.+..++|++.+.||+|+||.||+|.+.. ++..||+|++.... .......+.+|+.+++.++||||+++++++.
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~ 79 (277)
T cd05062 2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVS 79 (277)
T ss_pred cccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence 3456789999999999999999998653 35679999885432 1223456788999999999999999999999
Q ss_pred cCCeEEEEEeecCCCChHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEE
Q 012988 157 DTEYLYLIMEYLPGGDMMTLLMRED----------TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMK 226 (452)
Q Consensus 157 ~~~~~~lV~E~~~ggsL~~~l~~~~----------~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ik 226 (452)
+....++||||+++|+|.+++.... .++...+..++.|++.||.|||+.|++||||||+|||+++++.++
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~ 159 (277)
T cd05062 80 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 159 (277)
T ss_pred CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEE
Confidence 9999999999999999999986532 256678888999999999999999999999999999999999999
Q ss_pred EeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchh
Q 012988 227 LSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEV 306 (452)
Q Consensus 227 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~ 306 (452)
|+|||+++......... ......+++.|+|||+
T Consensus 160 l~dfg~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~y~aPE~ 192 (277)
T cd05062 160 IGDFGMTRDIYETDYYR-----------------------------------------------KGGKGLLPVRWMSPES 192 (277)
T ss_pred ECCCCCccccCCcceee-----------------------------------------------cCCCCccCHhhcChhH
Confidence 99999988653211000 0012346788999999
Q ss_pred ccCCCCCccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC
Q 012988 307 LLKKGYGMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG 384 (452)
Q Consensus 307 ~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~ 384 (452)
+.+..++.++|||||||++|+|++ |..||.+.+.......+... .....+ ..+++.+.++|.+||+ ||.+||
T Consensus 193 ~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~li~~~l~~~p~~Rp--- 266 (277)
T cd05062 193 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEG-GLLDKP--DNCPDMLFELMRMCWQYNPKMRP--- 266 (277)
T ss_pred hhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-CcCCCC--CCCCHHHHHHHHHHcCCChhhCc---
Confidence 998889999999999999999999 78999888777666655542 222223 3678999999999999 999999
Q ss_pred CHHHHhcC
Q 012988 385 GAHQIKAH 392 (452)
Q Consensus 385 ~~~eil~h 392 (452)
++.+++++
T Consensus 267 s~~e~l~~ 274 (277)
T cd05062 267 SFLEIISS 274 (277)
T ss_pred CHHHHHHH
Confidence 89998764
No 242
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=9.2e-43 Score=336.55 Aligned_cols=257 Identities=31% Similarity=0.524 Sum_probs=216.6
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
.++|.+++.||+|+||.||++.+..++..||+|++.... ....+.+.+|+.+++.++||||+++++++...+..|+|
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv 94 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVV 94 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc---chHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEE
Confidence 478999999999999999999998899999999985432 22346678899999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 165 MEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
+||+++++|.+++.+ ..+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++.......
T Consensus 95 ~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~---- 169 (293)
T cd06647 95 MEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---- 169 (293)
T ss_pred EecCCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccc----
Confidence 999999999999854 468899999999999999999999999999999999999999999999999887543110
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHH
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 324 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvi 324 (452)
.......|++.|+|||.+.+..++.++|+|||||+
T Consensus 170 ---------------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~l 204 (293)
T cd06647 170 ---------------------------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM 204 (293)
T ss_pred ---------------------------------------------cccccccCChhhcCchhhccCCCCchhhHHHHHHH
Confidence 00113468899999999988889999999999999
Q ss_pred HHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCC
Q 012988 325 MYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 325 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
+|+|++|..||...+.......+... ....++....++..+++||.+||. +|.+|| ++.+++.||||+..
T Consensus 205 l~~ll~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp---~~~~il~h~~~~~~ 275 (293)
T cd06647 205 AIEMVEGEPPYLNENPLRALYLIATN-GTPELQNPEKLSAIFRDFLNRCLEMDVEKRG---SAKELLQHPFLKIA 275 (293)
T ss_pred HHHHHhCCCCCCCCChhhheeehhcC-CCCCCCCccccCHHHHHHHHHHccCChhhCc---CHHHHhcCHHHhcC
Confidence 99999999999877654443333221 222333334578899999999998 999999 99999999999853
No 243
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=3.5e-44 Score=326.18 Aligned_cols=262 Identities=27% Similarity=0.442 Sum_probs=210.0
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCC----EEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEc-CCe
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGN----IYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQD-TEY 160 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~-~~~ 160 (452)
..|++++.||+|+||.||+|..+.++. .||||.++.... .........+|+.+++.++|||++.+..+|.. +..
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd-~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKD-GTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCC-CCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 469999999999999999997666543 789998865432 23344567789999999999999999999877 889
Q ss_pred EEEEEeecCCCChHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCC----CcEEEeecc
Q 012988 161 LYLIMEYLPGGDMMTLLMR-----EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKN----GHMKLSDFG 231 (452)
Q Consensus 161 ~~lV~E~~~ggsL~~~l~~-----~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~----g~ikl~DFG 231 (452)
+++++||.+ -+|+..|+- .+.++...++.++.||+.|++|||++-|+||||||.|||+..+ |.+||+|||
T Consensus 103 v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlG 181 (438)
T KOG0666|consen 103 VWLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLG 181 (438)
T ss_pred EEEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeeccc
Confidence 999999995 489988843 2468999999999999999999999999999999999999988 899999999
Q ss_pred CCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-C
Q 012988 232 LCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-K 310 (452)
Q Consensus 232 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~ 310 (452)
+++.+..+-... ......+-|.+|+|||.+.+ .
T Consensus 182 laR~~~~plkpl----------------------------------------------~s~d~VVVTiWYRAPELLLGa~ 215 (438)
T KOG0666|consen 182 LARLFNNPLKPL----------------------------------------------ASLDPVVVTIWYRAPELLLGAR 215 (438)
T ss_pred HHHHhhcccccc----------------------------------------------ccCCceEEEEEecChHHhcccc
Confidence 999876432110 01124678999999999998 5
Q ss_pred CCCccchhhhhhHHHHHhhhCCCCCCCCC---------hHHHHHHHhh---------ccCcccCCCC-------------
Q 012988 311 GYGMECDWWSLGAIMYEMLVGYPPFYADD---------PITTCRKIVH---------WRNHLKFPDD------------- 359 (452)
Q Consensus 311 ~~~~~~DiwSlGvil~elltG~~Pf~~~~---------~~~~~~~i~~---------~~~~~~~p~~------------- 359 (452)
.|+.++|+||.|||+.||+|-.+.|.+.. ..+.+.+|++ |..-..+|+.
T Consensus 216 hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~ 295 (438)
T KOG0666|consen 216 HYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYD 295 (438)
T ss_pred cccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcC
Confidence 68999999999999999999999997642 2334455544 2221222221
Q ss_pred -----------CCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCC
Q 012988 360 -----------SKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 360 -----------~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
..-++.+.+|+.+||. ||.+|+ ++.++++|+||..-
T Consensus 296 n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRI---ta~qAleh~yF~~d 343 (438)
T KOG0666|consen 296 NVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRI---TAEQALEHPYFTED 343 (438)
T ss_pred cchHHHHHHHhcCCCchHHHHHHHHhccCchhhc---cHHHHhcccccccC
Confidence 0125669999999999 999999 99999999999864
No 244
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.6e-42 Score=331.60 Aligned_cols=256 Identities=31% Similarity=0.533 Sum_probs=213.9
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhC---CCceeeEEEEEEcCCeEEE
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVA---SHCIVKLYYSFQDTEYLYL 163 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~---hp~iv~l~~~~~~~~~~~l 163 (452)
.|++++.||.|+||.||+|.+..++..||+|++.... .......+.+|+.+++.+. |||++++++++.+...+|+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 4888999999999999999999999999999986542 2334567888999999996 9999999999999999999
Q ss_pred EEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 164 IMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 164 V~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
||||+++++|.+++.. +.+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++..+....
T Consensus 80 v~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--- 155 (277)
T cd06917 80 IMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS--- 155 (277)
T ss_pred EEecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc---
Confidence 9999999999999855 578999999999999999999999999999999999999999999999999987653211
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchhhhhh
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDWWSLG 322 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~DiwSlG 322 (452)
.......|+..|+|||.+.+ ..++.++|+||||
T Consensus 156 ----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG 189 (277)
T cd06917 156 ----------------------------------------------SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLG 189 (277)
T ss_pred ----------------------------------------------cccccccCCcceeCHHHhccCCccccchhHHHHH
Confidence 00113468999999999875 4568999999999
Q ss_pred HHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCCC
Q 012988 323 AIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDVV 399 (452)
Q Consensus 323 vil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~~ 399 (452)
|++|+|++|..||.+.+.......+... ....++. ..++.++.++|.+||. ||.+|| ++.+++.||||+...
T Consensus 190 ~~l~~ll~g~~p~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~i~~~l~~~p~~R~---~~~~il~~~~~~~~~ 262 (277)
T cd06917 190 ITIYEMATGNPPYSDVDAFRAMMLIPKS-KPPRLED-NGYSKLLREFVAACLDEEPKERL---SAEELLKSKWIKAHS 262 (277)
T ss_pred HHHHHHHhCCCCCCCCChhhhhhccccC-CCCCCCc-ccCCHHHHHHHHHHcCCCcccCc---CHHHHhhChHhhccc
Confidence 9999999999999877665444333221 1122222 2378899999999998 999999 999999999998644
No 245
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=9.7e-43 Score=342.96 Aligned_cols=258 Identities=23% Similarity=0.330 Sum_probs=206.6
Q ss_pred CCCCCCCeeEeceeccCCCeEEEEEEEcc-----CCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEE
Q 012988 81 HKICVDDFELLTIIGRGAFGEVRLCREKK-----SGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYS 154 (452)
Q Consensus 81 ~~~~~~~y~i~~~LG~G~~g~V~~a~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~ 154 (452)
+.+..++|++.+.||.|+||.||+|.... +++.||+|++.... .......+..|+.++..+ +|+||++++++
T Consensus 2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~~~~l~~h~niv~~~~~ 79 (337)
T cd05054 2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA--TASEYKALMTELKILIHIGHHLNVVNLLGA 79 (337)
T ss_pred cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC--CHHHHHHHHHHHHHHHhhccCcchhheeee
Confidence 45566789999999999999999997543 45789999886432 122345677899999999 89999999998
Q ss_pred EEc-CCeEEEEEeecCCCChHHHHHhc-----------------------------------------------------
Q 012988 155 FQD-TEYLYLIMEYLPGGDMMTLLMRE----------------------------------------------------- 180 (452)
Q Consensus 155 ~~~-~~~~~lV~E~~~ggsL~~~l~~~----------------------------------------------------- 180 (452)
+.. +..+++||||+++|+|.+++...
T Consensus 80 ~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (337)
T cd05054 80 CTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEED 159 (337)
T ss_pred EecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccc
Confidence 764 45789999999999999998542
Q ss_pred --------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccccccCc
Q 012988 181 --------DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDD 252 (452)
Q Consensus 181 --------~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~ 252 (452)
..++...+..++.|++.||.|||++||+||||||+|||++.++.++|+|||+++.+......
T Consensus 160 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~---------- 229 (337)
T cd05054 160 EEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY---------- 229 (337)
T ss_pred hhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcch----------
Confidence 25788889999999999999999999999999999999999999999999999865311100
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhh-C
Q 012988 253 ENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV-G 331 (452)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ellt-G 331 (452)
.......++..|+|||++.+..++.++|||||||++|+|++ |
T Consensus 230 -------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g 272 (337)
T cd05054 230 -------------------------------------VRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLG 272 (337)
T ss_pred -------------------------------------hhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcC
Confidence 00112346778999999999999999999999999999998 9
Q ss_pred CCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcC
Q 012988 332 YPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAH 392 (452)
Q Consensus 332 ~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~h 392 (452)
..||.+....+.+............| ..+++++.+++.+||+ +|.+|| ++.++++|
T Consensus 273 ~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~cl~~~p~~RP---s~~ell~~ 329 (337)
T cd05054 273 ASPYPGVQIDEEFCRRLKEGTRMRAP--EYATPEIYSIMLDCWHNNPEDRP---TFSELVEI 329 (337)
T ss_pred CCCCCCCCccHHHHHHHhccCCCCCC--ccCCHHHHHHHHHHccCChhhCc---CHHHHHHH
Confidence 99998755444443333322222333 3578999999999999 999999 89998874
No 246
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=3.4e-42 Score=331.58 Aligned_cols=253 Identities=24% Similarity=0.392 Sum_probs=210.0
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEc-----cCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEc
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREK-----KSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQD 157 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~ 157 (452)
+..++|.+.+.||.|+||+||++... .++..+|+|.+.... ......+.+|+.+++.++||||+++++++..
T Consensus 2 ~~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 78 (288)
T cd05093 2 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNLQHEHIVKFYGVCVE 78 (288)
T ss_pred CchHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC---HHHHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence 34578999999999999999999853 345679999886542 2335568899999999999999999999999
Q ss_pred CCeEEEEEeecCCCChHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCc
Q 012988 158 TEYLYLIMEYLPGGDMMTLLMRED-------------TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGH 224 (452)
Q Consensus 158 ~~~~~lV~E~~~ggsL~~~l~~~~-------------~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ 224 (452)
.+.+++||||+++++|.+++...+ .+++..+..++.|++.||.|||++||+||||||+|||++.++.
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL 158 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCc
Confidence 999999999999999999996543 4899999999999999999999999999999999999999999
Q ss_pred EEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccc
Q 012988 225 MKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAP 304 (452)
Q Consensus 225 ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~AP 304 (452)
+||+|||+++....... ........+++.|+||
T Consensus 159 ~kl~dfg~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~y~aP 191 (288)
T cd05093 159 VKIGDFGMSRDVYSTDY-----------------------------------------------YRVGGHTMLPIRWMPP 191 (288)
T ss_pred EEeccCCccccccCCce-----------------------------------------------eecCCCCCccccccCH
Confidence 99999999875431100 0001123467889999
Q ss_pred hhccCCCCCccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCC
Q 012988 305 EVLLKKGYGMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLG 382 (452)
Q Consensus 305 E~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~ 382 (452)
|++.+..++.++|||||||++|+|++ |..||...+.......+.... .... ...++.++.+||.+||. ||.+||
T Consensus 192 E~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~-~~~~--~~~~~~~l~~li~~~l~~~p~~Rp- 267 (288)
T cd05093 192 ESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGR-VLQR--PRTCPKEVYDLMLGCWQREPHMRL- 267 (288)
T ss_pred HHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-cCCC--CCCCCHHHHHHHHHHccCChhhCC-
Confidence 99998899999999999999999998 999998888777777766522 1222 23578999999999999 999999
Q ss_pred CCCHHHHhc
Q 012988 383 TGGAHQIKA 391 (452)
Q Consensus 383 ~~~~~eil~ 391 (452)
++.+++.
T Consensus 268 --t~~~v~~ 274 (288)
T cd05093 268 --NIKEIHS 274 (288)
T ss_pred --CHHHHHH
Confidence 8888753
No 247
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=5e-42 Score=329.98 Aligned_cols=262 Identities=32% Similarity=0.525 Sum_probs=223.6
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEE
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLY 162 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~ 162 (452)
-..+.|++...||+|+||.||+|.+..++..||+|++..... ....+.+|+.+++.++|+||+++++++......|
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 91 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELW 91 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEE
Confidence 345679999999999999999999998999999999875432 3566788999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 163 LIMEYLPGGDMMTLLMRED-TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 163 lV~E~~~ggsL~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
+|+||+++++|.+++.... .++...+..++.|++.||.|||+.||+|+||+|+||+++.+|.++|+|||++.......
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~- 170 (286)
T cd06614 92 VVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK- 170 (286)
T ss_pred EEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccch-
Confidence 9999999999999998776 89999999999999999999999999999999999999999999999999876542110
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSL 321 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSl 321 (452)
.......|++.|+|||++.+..++.++|+|||
T Consensus 171 ------------------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~sl 202 (286)
T cd06614 171 ------------------------------------------------SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSL 202 (286)
T ss_pred ------------------------------------------------hhhccccCCcccCCHhHhcCCCCCCccccHHH
Confidence 00113357889999999998889999999999
Q ss_pred hHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCCCc
Q 012988 322 GAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDVVW 400 (452)
Q Consensus 322 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~~~ 400 (452)
||++|+|++|..||...+.......+... .....+....++..+.+||.+||. +|..|| ++.+++.||||...-|
T Consensus 203 Gvil~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp---t~~~il~~~~~~~~~~ 278 (286)
T cd06614 203 GIMCIEMAEGEPPYLREPPLRALFLITTK-GIPPLKNPEKWSPEFKDFLNKCLVKDPEKRP---SAEELLQHPFLKKACP 278 (286)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCCCCcchhhCCHHHHHHHHHHhccChhhCc---CHHHHhhChHhhccCc
Confidence 99999999999999887776555555432 222333333478999999999999 999999 9999999999998554
Q ss_pred c
Q 012988 401 D 401 (452)
Q Consensus 401 ~ 401 (452)
.
T Consensus 279 ~ 279 (286)
T cd06614 279 K 279 (286)
T ss_pred h
Confidence 3
No 248
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.8e-42 Score=331.59 Aligned_cols=252 Identities=23% Similarity=0.376 Sum_probs=210.3
Q ss_pred CCCeeEeceeccCCCeEEEEEEEcc-----CCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKK-----SGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE 159 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~ 159 (452)
.++|.+++.||+|+||.||+|.+.. ++..||+|++.... .......+.+|+++++.++|+||+++++++....
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 81 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA--SNDARKDFEREAELLTNFQHENIVKFYGVCTEGD 81 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC--CHHHHHHHHHHHHHHHhcCCCCchheeeEEecCC
Confidence 4679999999999999999998753 46789999986542 2223567889999999999999999999999999
Q ss_pred eEEEEEeecCCCChHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcE
Q 012988 160 YLYLIMEYLPGGDMMTLLMRED--------------TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHM 225 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~~~--------------~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~i 225 (452)
..++||||+++|+|.+++...+ .+++..+..++.|++.||.|||++||+||||||+|||++.++.+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeE
Confidence 9999999999999999997542 47888999999999999999999999999999999999999999
Q ss_pred EEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccch
Q 012988 226 KLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPE 305 (452)
Q Consensus 226 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE 305 (452)
||+|||+++........ .......+++.|+|||
T Consensus 162 kl~d~g~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~y~aPE 194 (280)
T cd05049 162 KIGDFGMSRDVYTTDYY-----------------------------------------------RVGGHTMLPIRWMPPE 194 (280)
T ss_pred EECCcccceecccCcce-----------------------------------------------ecCCCCcccceecChh
Confidence 99999998754211000 0011234678899999
Q ss_pred hccCCCCCccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCC
Q 012988 306 VLLKKGYGMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGT 383 (452)
Q Consensus 306 ~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~ 383 (452)
++.+..++.++|||||||++|+|++ |..||.+.+.......+... ....+ ...++..+.+||.+||. ||.+||
T Consensus 195 ~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~li~~~l~~~p~~Rp-- 269 (280)
T cd05049 195 SIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQG--RLLQR-PRTCPSEVYDIMLGCWKRDPQQRI-- 269 (280)
T ss_pred hhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC--CcCCC-CCCCCHHHHHHHHHHcCCCcccCC--
Confidence 9999999999999999999999998 99999888877777666542 22222 23688999999999999 999999
Q ss_pred CCHHHHhc
Q 012988 384 GGAHQIKA 391 (452)
Q Consensus 384 ~~~~eil~ 391 (452)
++.|+++
T Consensus 270 -~~~eil~ 276 (280)
T cd05049 270 -NIKDIHE 276 (280)
T ss_pred -CHHHHHH
Confidence 8988874
No 249
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=2.8e-42 Score=333.16 Aligned_cols=256 Identities=22% Similarity=0.354 Sum_probs=211.7
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCC----------------CEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCc
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSG----------------NIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHC 147 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~----------------~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~ 147 (452)
..++|++++.||+|+||.||+|.+..++ ..||+|++..... ......+.+|+.+++.++|||
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~e~~~l~~l~~~~ 80 (296)
T cd05051 3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS--DNAREDFLKEVKILSRLSDPN 80 (296)
T ss_pred chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC--HHHHHHHHHHHHHHHhcCCCC
Confidence 3568999999999999999999876543 5689998875432 234567889999999999999
Q ss_pred eeeEEEEEEcCCeEEEEEeecCCCChHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCc
Q 012988 148 IVKLYYSFQDTEYLYLIMEYLPGGDMMTLLMRED-----------TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDN 216 (452)
Q Consensus 148 iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~-----------~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~N 216 (452)
|+++++++..++.+++||||+++++|..++.... .+++..+..++.|++.||.|||++||+||||||+|
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~N 160 (296)
T cd05051 81 IARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRN 160 (296)
T ss_pred EeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhc
Confidence 9999999999999999999999999999997755 68999999999999999999999999999999999
Q ss_pred EEECCCCcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccc
Q 012988 217 LLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTV 296 (452)
Q Consensus 217 ILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (452)
||++.++.++|+|||+++.+..... ........
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~-----------------------------------------------~~~~~~~~ 193 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDY-----------------------------------------------YRVQGRAP 193 (296)
T ss_pred eeecCCCceEEccccceeecccCcc-----------------------------------------------eeecCcCC
Confidence 9999999999999999876532110 00111345
Q ss_pred cCCccccchhccCCCCCccchhhhhhHHHHHhhh--CCCCCCCCChHHHHHHHhhc----cCcccCCCCCCCChhHHHHH
Q 012988 297 GTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV--GYPPFYADDPITTCRKIVHW----RNHLKFPDDSKLSPEAKDLI 370 (452)
Q Consensus 297 Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ellt--G~~Pf~~~~~~~~~~~i~~~----~~~~~~p~~~~~s~~~~dLi 370 (452)
+|+.|+|||++.+..++.++|||||||++|+|++ |..||...+....+..+... ......+....++.++.+||
T Consensus 194 ~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 273 (296)
T cd05051 194 LPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELM 273 (296)
T ss_pred CCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHH
Confidence 6789999999998889999999999999999998 78899877766666655432 12222333346789999999
Q ss_pred HHhhc-CccccCCCCCHHHHhc
Q 012988 371 CRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 371 ~~mL~-dp~~R~~~~~~~eil~ 391 (452)
.+||. ||.+|| ++.+|++
T Consensus 274 ~~cl~~~p~~Rp---t~~el~~ 292 (296)
T cd05051 274 LECWRRDEEDRP---TFREIHL 292 (296)
T ss_pred HHHhccChhcCC---CHHHHHH
Confidence 99999 999999 8998854
No 250
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-43 Score=351.49 Aligned_cols=243 Identities=35% Similarity=0.612 Sum_probs=209.2
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEEcCCeEE
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQDTEYLY 162 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~~~~ 162 (452)
..+.|.+...+|.|+||.|-.+.+..+++.+++|++.+.. ....+|+.++... +||||+++.+.+.+..+.|
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~-------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA-------DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc-------cccccccchhhhhcCCCcceeecceecCCceee
Confidence 4678999999999999999999999999999999997652 1234566565555 7999999999999999999
Q ss_pred EEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEE-CCCCcEEEeeccCCccCCCCcc
Q 012988 163 LIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLL-DKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 163 lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl-~~~g~ikl~DFGla~~~~~~~~ 241 (452)
+|||++.|+.+.+.+.....+. .++..|+++|+.|+.|||++|||||||||+|||+ ++.|+++|+|||.++.....
T Consensus 393 ~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~-- 469 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS-- 469 (612)
T ss_pred eeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh--
Confidence 9999999999999887766665 7888899999999999999999999999999999 69999999999999876421
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSL 321 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSl 321 (452)
..+.+-|..|.|||++...+|+.++|||||
T Consensus 470 --------------------------------------------------~~tp~~t~~y~APEvl~~~~yt~acD~WSL 499 (612)
T KOG0603|consen 470 --------------------------------------------------CDTPALTLQYVAPEVLAIQEYTEACDWWSL 499 (612)
T ss_pred --------------------------------------------------hcccchhhcccChhhhccCCCCcchhhHHH
Confidence 123467889999999999999999999999
Q ss_pred hHHHHHhhhCCCCCCCCChH-HHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 322 GAIMYEMLVGYPPFYADDPI-TTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 322 Gvil~elltG~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
|++||+||+|+.||...... ++...| ...++. ..+|++++|||++||+ ||..|+ ++.+++.||||
T Consensus 500 GvlLy~ML~G~tp~~~~P~~~ei~~~i----~~~~~s--~~vS~~AKdLl~~LL~~dP~~Rl---~~~~i~~h~w~ 566 (612)
T KOG0603|consen 500 GVLLYEMLTGRTLFAAHPAGIEIHTRI----QMPKFS--ECVSDEAKDLLQQLLQVDPALRL---GADEIGAHPWF 566 (612)
T ss_pred HHHHHHHHhCCCccccCCchHHHHHhh----cCCccc--cccCHHHHHHHHHhccCChhhCc---ChhhhccCcch
Confidence 99999999999999876555 333333 223333 3799999999999999 999999 99999999999
No 251
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=2.4e-42 Score=331.40 Aligned_cols=254 Identities=32% Similarity=0.524 Sum_probs=210.3
Q ss_pred eeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEee
Q 012988 88 FELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEY 167 (452)
Q Consensus 88 y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~ 167 (452)
|++++.||.|++|.||+|.++.+|..||+|++..... .......+.+|+.+++.++|||++++++++.+.+..|+||||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE-DEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc-cccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 6788999999999999999999999999999875432 223345677899999999999999999999999999999999
Q ss_pred cCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 168 LPGGDMMTLLMRED--TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 168 ~~ggsL~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
+ +++|.+++.... .+++..+..++.|++.||.|||+.|++||||+|+||+++.++.++|+|||++..+....
T Consensus 80 ~-~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~----- 153 (283)
T cd07835 80 L-DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV----- 153 (283)
T ss_pred c-CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc-----
Confidence 9 468999987765 78999999999999999999999999999999999999999999999999987543110
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC-CCCccchhhhhhHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK-GYGMECDWWSLGAI 324 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~-~~~~~~DiwSlGvi 324 (452)
.......+++.|+|||++.+. .++.++||||||++
T Consensus 154 --------------------------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~ 189 (283)
T cd07835 154 --------------------------------------------RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCI 189 (283)
T ss_pred --------------------------------------------cccCccccccCCCCCceeecCcccCcHHHHHHHHHH
Confidence 001123568899999988764 57899999999999
Q ss_pred HHHhhhCCCCCCCCChHHHHHHHhhccCcc----------------cCC---------CCCCCChhHHHHHHHhhc-Ccc
Q 012988 325 MYEMLVGYPPFYADDPITTCRKIVHWRNHL----------------KFP---------DDSKLSPEAKDLICRLLC-DVE 378 (452)
Q Consensus 325 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~----------------~~p---------~~~~~s~~~~dLi~~mL~-dp~ 378 (452)
+|+|++|.+||...+.......+....... .++ ....++..+.+||.+||+ ||.
T Consensus 190 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~ 269 (283)
T cd07835 190 FAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPA 269 (283)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChh
Confidence 999999999998877665554443311000 011 123577899999999999 999
Q ss_pred ccCCCCCHHHHhcCCCc
Q 012988 379 HRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 379 ~R~~~~~~~eil~hp~f 395 (452)
+|| ++.+++.||||
T Consensus 270 ~Rp---t~~~il~~~~~ 283 (283)
T cd07835 270 KRI---SAKAALQHPYF 283 (283)
T ss_pred hCc---CHHHHhcCCCC
Confidence 999 99999999998
No 252
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2.6e-42 Score=337.03 Aligned_cols=253 Identities=20% Similarity=0.324 Sum_probs=207.1
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCE----EEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNI----YAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE 159 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~----vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~ 159 (452)
...+|++++.||+|+||+||+|.+..++.. ||+|++.... .....+.+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~- 81 (316)
T cd05108 5 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLTS- 81 (316)
T ss_pred chhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-
Confidence 356899999999999999999998766654 8999886432 223346688899999999999999999998765
Q ss_pred eEEEEEeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCC
Q 012988 160 YLYLIMEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDC 238 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~ 238 (452)
..++|+||+++|+|.+++... ..++...+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.+..
T Consensus 82 ~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 82 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccC
Confidence 578999999999999999764 4688889999999999999999999999999999999999999999999999986532
Q ss_pred CcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchh
Q 012988 239 STLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDW 318 (452)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Di 318 (452)
.... .......++..|+|||++.+..++.++||
T Consensus 162 ~~~~-----------------------------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di 194 (316)
T cd05108 162 DEKE-----------------------------------------------YHAEGGKVPIKWMALESILHRIYTHQSDV 194 (316)
T ss_pred CCcc-----------------------------------------------eeccCCccceeecChHHhccCCCCchhhh
Confidence 1100 00012234678999999999999999999
Q ss_pred hhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcC
Q 012988 319 WSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAH 392 (452)
Q Consensus 319 wSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~h 392 (452)
|||||++|||++ |..||.+....... .+..... ..|....++.++.++|.+||. ||.+|| ++.+++.+
T Consensus 195 ~slGv~l~el~t~g~~p~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rp---s~~~l~~~ 264 (316)
T cd05108 195 WSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGE--RLPQPPICTIDVYMIMVKCWMIDADSRP---KFRELIIE 264 (316)
T ss_pred HHHHHHHHHHHcCCCCCCCCCCHHHHH-HHHhCCC--CCCCCCCCCHHHHHHHHHHccCChhhCc---CHHHHHHH
Confidence 999999999997 99999877665543 3433222 333344688999999999998 999999 89998876
No 253
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=4.1e-42 Score=324.70 Aligned_cols=253 Identities=32% Similarity=0.571 Sum_probs=214.5
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
+|.+.+.||.|+||.||+|..+.+|..||+|.+...... ....+.+.+|+.+++.++|+||+++++.+.+...+|+|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMP-VKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhcc-chhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence 589999999999999999999999999999998764322 2234567889999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCc-EEEeeccCCccCCCCcchh
Q 012988 167 YLPGGDMMTLLMRED--TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGH-MKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 167 ~~~ggsL~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~-ikl~DFGla~~~~~~~~~~ 243 (452)
|+++++|.+++.... .+++..+..++.|++.||.|||++||+|+||||+||++++++. ++|+|||.+..+....
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~--- 156 (257)
T cd08225 80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM--- 156 (257)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc---
Confidence 999999999987643 5789999999999999999999999999999999999998864 6999999987653110
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhH
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 323 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGv 323 (452)
.......|++.|+|||++.+..++.++|+||||+
T Consensus 157 ----------------------------------------------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~ 190 (257)
T cd08225 157 ----------------------------------------------ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGC 190 (257)
T ss_pred ----------------------------------------------ccccccCCCccccCHHHHcCCCCCchhhHHHHHH
Confidence 0011245889999999998888999999999999
Q ss_pred HHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 324 IMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 324 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
++|+|++|..||...+.......+.... + .+....++.+++++|.+||. +|.+|| ++.++++||||
T Consensus 191 il~~l~~g~~p~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~i~~~l~~~p~~Rp---t~~~ll~~~~~ 257 (257)
T cd08225 191 VLYELCTLKHPFEGNNLHQLVLKICQGY--F-APISPNFSRDLRSLISQLFKVSPRDRP---SITSILKRPFL 257 (257)
T ss_pred HHHHHHhCCCCCCCccHHHHHHHHhccc--C-CCCCCCCCHHHHHHHHHHhccChhhCc---CHHHHhhCCCC
Confidence 9999999999998877666655554321 1 12223578999999999998 999999 99999999997
No 254
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=4.1e-43 Score=335.95 Aligned_cols=256 Identities=29% Similarity=0.470 Sum_probs=214.8
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
.|++++.||.|+||.||+|.+..++..||+|++..... ......+.+|+.+++.++||||+++++++.....+|+|||
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIME 82 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc--hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEE
Confidence 47778899999999999999999999999999864432 2345678899999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcc
Q 012988 167 YLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHE 246 (452)
Q Consensus 167 ~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~ 246 (452)
|+++++|.+++. ...+++..++.++.|++.||.|||++||+|+||+|+||+++.++.++|+|||++..+.....
T Consensus 83 ~~~~~~L~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~----- 156 (277)
T cd06642 83 YLGGGSALDLLK-PGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI----- 156 (277)
T ss_pred ccCCCcHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcch-----
Confidence 999999999885 45789999999999999999999999999999999999999999999999999876531100
Q ss_pred ccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHH
Q 012988 247 HKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 326 (452)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ 326 (452)
......|+..|+|||++.+..++.++|+|||||++|
T Consensus 157 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ 192 (277)
T cd06642 157 --------------------------------------------KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAI 192 (277)
T ss_pred --------------------------------------------hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHH
Confidence 011245888999999999988999999999999999
Q ss_pred HhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCCCc
Q 012988 327 EMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDVVW 400 (452)
Q Consensus 327 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~~~ 400 (452)
+|++|..||...........+... .....+ ..++.++.+||.+||. +|.+|| ++.+++.||||....+
T Consensus 193 el~tg~~p~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~li~~~l~~~p~~Rp---~~~~il~~~~~~~~~~ 261 (277)
T cd06642 193 ELAKGEPPNSDLHPMRVLFLIPKN-SPPTLE--GQYSKPFKEFVEACLNKDPRFRP---TAKELLKHKFITRYTK 261 (277)
T ss_pred HHHhCCCCCcccchhhHHhhhhcC-CCCCCC--cccCHHHHHHHHHHccCCcccCc---CHHHHHHhHHHHHHhh
Confidence 999999999876655544433221 111122 2567899999999999 999999 9999999999986543
No 255
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=6.6e-42 Score=323.65 Aligned_cols=248 Identities=21% Similarity=0.350 Sum_probs=208.0
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
.++|++++.||+|+||.||+|..+ ++..+|+|.+..... ....+.+|+.+++.++||||+++++++...+.+|+|
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 77 (256)
T cd05114 3 PSELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAM----SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIV 77 (256)
T ss_pred HHHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCc----cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEE
Confidence 467999999999999999999875 456899998765432 234678899999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 165 MEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
|||+++|+|.+++... +.+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.......
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~-- 155 (256)
T cd05114 78 TEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY-- 155 (256)
T ss_pred EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCce--
Confidence 9999999999998653 5689999999999999999999999999999999999999999999999999875421110
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhH
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 323 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGv 323 (452)
.......++..|+|||++.+..++.++||||||+
T Consensus 156 ----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~ 189 (256)
T cd05114 156 ----------------------------------------------TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGV 189 (256)
T ss_pred ----------------------------------------------eccCCCCCchhhCChhhcccCccchhhhhHHHHH
Confidence 0001223566899999999889999999999999
Q ss_pred HHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 324 IMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 324 il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
++|+|++ |+.||...+..+....+.... ....| ...+..+.+||.+|+. +|.+|| ++.++++
T Consensus 190 ~l~el~~~g~~p~~~~~~~~~~~~i~~~~-~~~~~--~~~~~~~~~li~~c~~~~p~~Rp---s~~~l~~ 253 (256)
T cd05114 190 LMWEVFTEGKMPFEKKSNYEVVEMISRGF-RLYRP--KLASMTVYEVMYSCWHEKPEGRP---TFAELLR 253 (256)
T ss_pred HHHHHHcCCCCCCCCCCHHHHHHHHHCCC-CCCCC--CCCCHHHHHHHHHHccCCcccCc---CHHHHHH
Confidence 9999999 999999888777777776522 22223 3467899999999999 999999 8988874
No 256
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=4.7e-42 Score=328.72 Aligned_cols=253 Identities=30% Similarity=0.480 Sum_probs=214.8
Q ss_pred eeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEee
Q 012988 88 FELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEY 167 (452)
Q Consensus 88 y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~ 167 (452)
|++++.||.|+||.||+|.+..++..||+|++..... ......+.+|+.+++.++||||+++++++.+....|+||||
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence 7788999999999999999999999999998864432 23346788999999999999999999999999999999999
Q ss_pred cCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccc
Q 012988 168 LPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEH 247 (452)
Q Consensus 168 ~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~ 247 (452)
+++++|..++.. ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++..+....
T Consensus 84 ~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~------- 155 (277)
T cd06641 84 LGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ------- 155 (277)
T ss_pred CCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccch-------
Confidence 999999998854 578999999999999999999999999999999999999999999999999987553110
Q ss_pred cccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHH
Q 012988 248 KTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 327 (452)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~e 327 (452)
.......|+..|+|||.+.+..++.++|+|||||++|+
T Consensus 156 ------------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~ 193 (277)
T cd06641 156 ------------------------------------------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 193 (277)
T ss_pred ------------------------------------------hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHH
Confidence 00113458889999999988888999999999999999
Q ss_pred hhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCC
Q 012988 328 MLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 328 lltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
|++|..||...........+... ....++ ..++.++.++|.+||. +|.+|| ++.+++.||||...
T Consensus 194 l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~i~~~l~~~p~~Rp---~~~~~l~~~~~~~~ 259 (277)
T cd06641 194 LAKGEPPHSELHPMKVLFLIPKN-NPPTLE--GNYSKPLKEFVEACLNKEPSFRP---TAKELLKHKFIVRF 259 (277)
T ss_pred HHcCCCCCCccchHHHHHHHhcC-CCCCCC--cccCHHHHHHHHHHccCChhhCc---CHHHHHhCHHHhhh
Confidence 99999999877765555554332 121222 2578999999999998 999999 99999999999853
No 257
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=3.9e-42 Score=323.45 Aligned_cols=249 Identities=53% Similarity=0.955 Sum_probs=216.4
Q ss_pred eccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeecCCCCh
Q 012988 94 IGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDM 173 (452)
Q Consensus 94 LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~ggsL 173 (452)
||.|+||.||++.+..+++.||+|++.+...........+..|+.+++.++||||+++++.+.++..+|+||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 69999999999999989999999999877655555677889999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccccccCcc
Q 012988 174 MTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDE 253 (452)
Q Consensus 174 ~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~ 253 (452)
.+++.....+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~------------- 147 (250)
T cd05123 81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG------------- 147 (250)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC-------------
Confidence 9999888889999999999999999999999999999999999999999999999999987653110
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhhCCC
Q 012988 254 NMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 333 (452)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~elltG~~ 333 (452)
.......|+..|+|||.+.+..++.++|+||||+++|+|++|..
T Consensus 148 ------------------------------------~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~ 191 (250)
T cd05123 148 ------------------------------------SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKP 191 (250)
T ss_pred ------------------------------------CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCC
Confidence 00123468889999999988888999999999999999999999
Q ss_pred CCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 334 PFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 334 Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
||...+.......+.. ..+.+|. .++..+.++|++||. ||.+||+...+.++++||||
T Consensus 192 p~~~~~~~~~~~~~~~--~~~~~~~--~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 192 PFYAEDRKEIYEKILK--DPLRFPE--FLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred CCCCCCHHHHHHHHhc--CCCCCCC--CCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 9988877666666654 3344443 578999999999998 99999932222999999998
No 258
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=5.5e-42 Score=327.79 Aligned_cols=255 Identities=18% Similarity=0.302 Sum_probs=211.5
Q ss_pred CCCCCCeeEeceeccCCCeEEEEEEEccC-----CCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEE
Q 012988 82 KICVDDFELLTIIGRGAFGEVRLCREKKS-----GNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQ 156 (452)
Q Consensus 82 ~~~~~~y~i~~~LG~G~~g~V~~a~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~ 156 (452)
++..++|++.+.||+|+||.||+|..+.. +..||+|.+.... .......+.+|+.+++.++||||+++++++.
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~ 79 (277)
T cd05032 2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVS 79 (277)
T ss_pred ccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEc
Confidence 34567899999999999999999998654 4789999986442 1223456788999999999999999999999
Q ss_pred cCCeEEEEEeecCCCChHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEE
Q 012988 157 DTEYLYLIMEYLPGGDMMTLLMRED----------TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMK 226 (452)
Q Consensus 157 ~~~~~~lV~E~~~ggsL~~~l~~~~----------~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ik 226 (452)
.....|+||||+++|+|.+++.... .+++..+..++.|++.||.|||+.||+||||||+|||++.++.+|
T Consensus 80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~k 159 (277)
T cd05032 80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVK 159 (277)
T ss_pred CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEE
Confidence 9999999999999999999986532 367788999999999999999999999999999999999999999
Q ss_pred EeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchh
Q 012988 227 LSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEV 306 (452)
Q Consensus 227 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~ 306 (452)
|+|||+++.+...... .......+|..|+|||.
T Consensus 160 l~dfg~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~y~aPE~ 192 (277)
T cd05032 160 IGDFGMTRDIYETDYY-----------------------------------------------RKGGKGLLPVRWMAPES 192 (277)
T ss_pred ECCcccchhhccCccc-----------------------------------------------ccCCCCCccccccCHHH
Confidence 9999998765321100 00113356789999999
Q ss_pred ccCCCCCccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC
Q 012988 307 LLKKGYGMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG 384 (452)
Q Consensus 307 ~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~ 384 (452)
+.+..++.++|||||||++|+|++ |..||.+.+.......+.. .....+|. .++.++.+||.+||+ +|.+||
T Consensus 193 ~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~li~~~l~~~p~~Rp--- 266 (277)
T cd05032 193 LKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVID-GGHLDLPE--NCPDKLLELMRMCWQYNPKMRP--- 266 (277)
T ss_pred HhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhc-CCCCCCCC--CCCHHHHHHHHHHcCCChhhCC---
Confidence 988889999999999999999998 9999988887776666652 33334443 578999999999999 999999
Q ss_pred CHHHHhc
Q 012988 385 GAHQIKA 391 (452)
Q Consensus 385 ~~~eil~ 391 (452)
++.+++.
T Consensus 267 t~~~l~~ 273 (277)
T cd05032 267 TFLEIVS 273 (277)
T ss_pred CHHHHHH
Confidence 8888875
No 259
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.6e-43 Score=349.32 Aligned_cols=256 Identities=25% Similarity=0.447 Sum_probs=221.3
Q ss_pred CCee-EeceeccCCCeEEEEEEEccCCCEEEEEEeecchhc-ccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCe--E
Q 012988 86 DDFE-LLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMV-KRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEY--L 161 (452)
Q Consensus 86 ~~y~-i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~--~ 161 (452)
++|- ...+||+|+|-+||+|.+..+|..||--.++-..+. .....+++..|+.+|+.|+||||+++|++|.+..+ +
T Consensus 39 gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~i 118 (632)
T KOG0584|consen 39 GRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTI 118 (632)
T ss_pred CceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCcee
Confidence 4443 345899999999999999999999987665544433 33456889999999999999999999999998765 8
Q ss_pred EEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--CeeecCCCCCcEEECCC-CcEEEeeccCCccCCC
Q 012988 162 YLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKH--NYIHRDIKPDNLLLDKN-GHMKLSDFGLCKPLDC 238 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~--givHrDlkp~NILl~~~-g~ikl~DFGla~~~~~ 238 (452)
.+|+|++.+|+|+.|+++.+.+....++.|++||+.||.|||++ .|||||||-+||+|+.+ |.|||+|+|||.....
T Consensus 119 n~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 119 NFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred eeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence 89999999999999999999999999999999999999999998 59999999999999864 8999999999987642
Q ss_pred CcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchh
Q 012988 239 STLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDW 318 (452)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Di 318 (452)
+ .+...+|||.|||||+.. ..|+..+||
T Consensus 199 s---------------------------------------------------~aksvIGTPEFMAPEmYE-E~YnE~VDV 226 (632)
T KOG0584|consen 199 S---------------------------------------------------HAKSVIGTPEFMAPEMYE-ENYNELVDV 226 (632)
T ss_pred c---------------------------------------------------ccceeccCccccChHHHh-hhcchhhhh
Confidence 2 233578999999999986 889999999
Q ss_pred hhhhHHHHHhhhCCCCCC-CCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhcCccccCCCCCHHHHhcCCCcCC
Q 012988 319 WSLGAIMYEMLVGYPPFY-ADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLCDVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 319 wSlGvil~elltG~~Pf~-~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~dp~~R~~~~~~~eil~hp~f~~ 397 (452)
||||++++||+|+..||. ..++.++++++..+..+-.+.. --.+++++||.+||.-..+|+ ++.|+|.||||..
T Consensus 227 YaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~k--V~dPevr~fIekCl~~~~~R~---sa~eLL~d~Ff~~ 301 (632)
T KOG0584|consen 227 YAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSK--VKDPEVREFIEKCLATKSERL---SAKELLKDPFFDE 301 (632)
T ss_pred hhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhc--cCCHHHHHHHHHHhcCchhcc---CHHHHhhChhhcc
Confidence 999999999999999996 4677888888888766555543 236999999999998788999 9999999999986
Q ss_pred C
Q 012988 398 V 398 (452)
Q Consensus 398 ~ 398 (452)
-
T Consensus 302 d 302 (632)
T KOG0584|consen 302 D 302 (632)
T ss_pred c
Confidence 3
No 260
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=5.8e-42 Score=328.05 Aligned_cols=255 Identities=22% Similarity=0.337 Sum_probs=210.1
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEcc-----CCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEc
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREKK-----SGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQD 157 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~ 157 (452)
+..++|++.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+++.++|+||+++++++.+
T Consensus 3 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 80 (277)
T cd05036 3 VPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC--SEQDESDFLMEALIMSKFNHQNIVRLIGVSFE 80 (277)
T ss_pred CCHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc
Confidence 345779999999999999999999987 77889999875432 12233567889999999999999999999999
Q ss_pred CCeEEEEEeecCCCChHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCC---cEEE
Q 012988 158 TEYLYLIMEYLPGGDMMTLLMRED-------TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNG---HMKL 227 (452)
Q Consensus 158 ~~~~~lV~E~~~ggsL~~~l~~~~-------~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g---~ikl 227 (452)
.+..|+||||++|++|.+++...+ .+++..+..++.||+.||.|||++|++||||||+|||++.++ .+||
T Consensus 81 ~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 81 RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEe
Confidence 999999999999999999997643 488899999999999999999999999999999999998765 5999
Q ss_pred eeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhc
Q 012988 228 SDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVL 307 (452)
Q Consensus 228 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~ 307 (452)
+|||+++.+...... .......++..|+|||++
T Consensus 161 ~dfg~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~y~aPE~~ 193 (277)
T cd05036 161 ADFGMARDIYRASYY-----------------------------------------------RKGGRAMLPIKWMPPEAF 193 (277)
T ss_pred ccCccccccCCccce-----------------------------------------------ecCCCCCccHhhCCHHHH
Confidence 999999865311100 000112345679999999
Q ss_pred cCCCCCccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCC
Q 012988 308 LKKGYGMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGG 385 (452)
Q Consensus 308 ~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~ 385 (452)
.+..++.++|||||||++|+|++ |..||.+.+.......+... ....+| ..++..+.++|.+||+ +|.+|| +
T Consensus 194 ~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~i~~cl~~~p~~Rp---s 267 (277)
T cd05036 194 LDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGG-GRLDPP--KGCPGPVYRIMTDCWQHTPEDRP---N 267 (277)
T ss_pred hcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-CcCCCC--CCCCHHHHHHHHHHcCCCcccCc---C
Confidence 98899999999999999999997 99999887777666555432 223333 4688999999999999 999999 9
Q ss_pred HHHHhcC
Q 012988 386 AHQIKAH 392 (452)
Q Consensus 386 ~~eil~h 392 (452)
+.++++|
T Consensus 268 ~~~vl~~ 274 (277)
T cd05036 268 FATILER 274 (277)
T ss_pred HHHHHHH
Confidence 9999876
No 261
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=8.6e-42 Score=333.50 Aligned_cols=253 Identities=26% Similarity=0.395 Sum_probs=213.9
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
..|..++.||+|+||.||+|.+..++..||+|++.............+.+|+.+++.++|||++++++++.+....|+||
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 104 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM 104 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence 34888999999999999999999999999999987654333444567888999999999999999999999999999999
Q ss_pred eecCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 166 EYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 166 E~~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
||++ |+|.+++.. ...+++..+..++.|++.||.|||++||+||||+|+||+++.++.++|+|||++......
T Consensus 105 e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~----- 178 (317)
T cd06635 105 EYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA----- 178 (317)
T ss_pred eCCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCc-----
Confidence 9996 477777644 567899999999999999999999999999999999999999999999999987643210
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhcc---CCCCCccchhhhh
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLL---KKGYGMECDWWSL 321 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~---~~~~~~~~DiwSl 321 (452)
....|++.|+|||++. ...++.++|||||
T Consensus 179 ------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~sl 210 (317)
T cd06635 179 ------------------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSL 210 (317)
T ss_pred ------------------------------------------------ccccCCccccChhhhhcCCCCCCCccccHHHH
Confidence 1245888999999984 3567899999999
Q ss_pred hHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 322 GAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 322 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
||++|+|++|..||...+.......+..... .......+++.+++||.+||. +|.+|| ++.+++.|+|+..
T Consensus 211 Gvil~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rp---t~~~il~~~~~~~ 282 (317)
T cd06635 211 GITCIELAERKPPLFNMNAMSALYHIAQNES--PTLQSNEWSDYFRNFVDSCLQKIPQDRP---TSEELLKHMFVLR 282 (317)
T ss_pred HHHHHHHHhCCCCCCCccHHHHHHHHHhccC--CCCCCccccHHHHHHHHHHccCCcccCc---CHHHHHhChhhhc
Confidence 9999999999999988777666666654221 122223578899999999999 999999 9999999999964
No 262
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=4e-43 Score=359.75 Aligned_cols=267 Identities=24% Similarity=0.397 Sum_probs=215.0
Q ss_pred CCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhC-CCceeeEEEEEE-c-
Q 012988 81 HKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVA-SHCIVKLYYSFQ-D- 157 (452)
Q Consensus 81 ~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~-~- 157 (452)
..+...+++|.+.|.+|||+.||+|++...|..||+|++... .....+.+.+|+++|+.|. |+|||.+++... .
T Consensus 32 ~~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~ 108 (738)
T KOG1989|consen 32 FTVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINR 108 (738)
T ss_pred EEECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccc
Confidence 345556789999999999999999999988899999988654 3455778999999999997 999999999432 1
Q ss_pred -----CCeEEEEEeecCCCChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCCCcEEECCCCcEEEe
Q 012988 158 -----TEYLYLIMEYLPGGDMMTLLMR--EDTLTENVARFYIAQSVLAIESIHKHN--YIHRDIKPDNLLLDKNGHMKLS 228 (452)
Q Consensus 158 -----~~~~~lV~E~~~ggsL~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~g--ivHrDlkp~NILl~~~g~ikl~ 228 (452)
.-.++|.||||.||.|-+++.. ...|++.++..|+++++.||.+||.+. |||||||-|||||+.+|+.|||
T Consensus 109 ~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLC 188 (738)
T KOG1989|consen 109 SSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLC 188 (738)
T ss_pred cCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeC
Confidence 1258899999999999999964 456999999999999999999999997 9999999999999999999999
Q ss_pred eccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhcc
Q 012988 229 DFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLL 308 (452)
Q Consensus 229 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~ 308 (452)
|||.|...-.... .......... .....-|+.|+|||++-
T Consensus 189 DFGSatt~~~~~~-----------------------------------~~~e~~~ve~-----eI~k~TTp~YRsPEMID 228 (738)
T KOG1989|consen 189 DFGSATTKILSPT-----------------------------------SAQEVNYVEE-----EIEKYTTPQYRSPEMID 228 (738)
T ss_pred cccccccccCCCc-----------------------------------cHHHHHHHHH-----HHHhhCCccccChHHHh
Confidence 9998864311100 0000000000 01223689999999974
Q ss_pred ---CCCCCccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC
Q 012988 309 ---KKGYGMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG 384 (452)
Q Consensus 309 ---~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~ 384 (452)
+.+.+.|+|||+|||+||.|+....||...... .|++ ..+.||..+.++..+++||+.||+ ||.+||
T Consensus 229 lysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l----aIln--g~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RP--- 299 (738)
T KOG1989|consen 229 LYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL----AILN--GNYSFPPFPNYSDRLKDLIRTMLQPNPDERP--- 299 (738)
T ss_pred hhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce----eEEe--ccccCCCCccHHHHHHHHHHHHhccCcccCC---
Confidence 677899999999999999999999999876432 3444 677888878999999999999999 999999
Q ss_pred CHHHHhc--------CCCcCCCC
Q 012988 385 GAHQIKA--------HPWFKDVV 399 (452)
Q Consensus 385 ~~~eil~--------hp~f~~~~ 399 (452)
++.|++. ++++.++.
T Consensus 300 nI~Qv~~~~~~l~~~~~~~~~~~ 322 (738)
T KOG1989|consen 300 NIYQVLEEIFELANKPCPIPDIY 322 (738)
T ss_pred CHHHHHHHHHHHhcCCCCccccc
Confidence 8888876 46666655
No 263
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=3.2e-42 Score=327.60 Aligned_cols=251 Identities=30% Similarity=0.519 Sum_probs=209.0
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++.+.||.|+||.||+|.++.++..||||.+.............+.+|+.+++.++||||+++++++.+.+.+++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 57999999999999999999999999999999887654444445567889999999999999999999999999999999
Q ss_pred eecCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 166 EYLPGGDMMTLLMR----EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 166 E~~~ggsL~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
||+++++|.+++.. ...+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~- 160 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT- 160 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC-
Confidence 99999999998863 3568999999999999999999999999999999999999999999999999987543110
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSL 321 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSl 321 (452)
.......|+..|+|||.+.+..++.++|+|||
T Consensus 161 ------------------------------------------------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~sl 192 (267)
T cd08229 161 ------------------------------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSL 192 (267)
T ss_pred ------------------------------------------------cccccccCCcCccCHHHhcCCCccchhhHHHH
Confidence 00113468899999999998889999999999
Q ss_pred hHHHHHhhhCCCCCCCCCh--HHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHh
Q 012988 322 GAIMYEMLVGYPPFYADDP--ITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIK 390 (452)
Q Consensus 322 Gvil~elltG~~Pf~~~~~--~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil 390 (452)
|+++|+|++|..||.+... ......+... .....+ ...++..+++||.+||. ||.+|| ++.+|+
T Consensus 193 G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rp---t~~~i~ 259 (267)
T cd08229 193 GCLLYEMAALQSPFYGDKMNLYSLCKKIEQC-DYPPLP-SDHYSEELRQLVNMCINPDPEKRP---DITYVY 259 (267)
T ss_pred HHHHHHHHhCCCCcccccchHHHHhhhhhcC-CCCCCC-cccccHHHHHHHHHhcCCCcccCC---CHHHHH
Confidence 9999999999999976543 2233333221 111112 13578999999999998 999999 888665
No 264
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.3e-41 Score=331.71 Aligned_cols=254 Identities=26% Similarity=0.387 Sum_probs=213.0
Q ss_pred eeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEee
Q 012988 88 FELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEY 167 (452)
Q Consensus 88 y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~ 167 (452)
|...++||+|+||+||+|.+..+|..||+|++.............+.+|+.+++.++|||++++++++.+....|+||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 67778899999999999999999999999998765443444456788899999999999999999999999999999999
Q ss_pred cCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcc
Q 012988 168 LPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHE 246 (452)
Q Consensus 168 ~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~ 246 (452)
+. |+|.+++.. ...+++..+..++.|++.||.|||++||+||||+|+||+++.++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~-------- 173 (313)
T cd06633 103 CL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP-------- 173 (313)
T ss_pred CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCC--------
Confidence 95 577777754 45789999999999999999999999999999999999999999999999998753210
Q ss_pred ccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhcc---CCCCCccchhhhhhH
Q 012988 247 HKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLL---KKGYGMECDWWSLGA 323 (452)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~---~~~~~~~~DiwSlGv 323 (452)
.....|+..|+|||++. ...++.++|||||||
T Consensus 174 ---------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGv 208 (313)
T cd06633 174 ---------------------------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 208 (313)
T ss_pred ---------------------------------------------CCCccccccccChhhccccCCCCCCchhhHHHHHH
Confidence 11346889999999984 356788999999999
Q ss_pred HHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCCCc
Q 012988 324 IMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDVVW 400 (452)
Q Consensus 324 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~~~ 400 (452)
++|+|++|..||...+.......+.... ....+ ...++..+++||.+||+ +|.+|| ++.+++.||||+...-
T Consensus 209 il~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~l~~li~~~l~~~P~~Rp---~~~~~l~~~~~~~~~~ 281 (313)
T cd06633 209 TCIELAERKPPLFNMNAMSALYHIAQND-SPTLQ-SNEWTDSFRGFVDYCLQKIPQERP---ASAELLRHDFVRRDRP 281 (313)
T ss_pred HHHHHHhCCCCCCCCChHHHHHHHHhcC-CCCCC-ccccCHHHHHHHHHHccCChhhCc---CHHHHhcCcccCCCch
Confidence 9999999999998877666665554321 11111 23567889999999999 999999 9999999999987543
No 265
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.7e-41 Score=318.41 Aligned_cols=251 Identities=35% Similarity=0.553 Sum_probs=216.2
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
+|++.+.||.|++|.||++.+..++..+++|++..... .....+.+|+.+++.++|++++++++.+......++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e 77 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME 77 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence 58899999999999999999998999999999876532 345678899999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 167 YLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 167 ~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
|+++++|.+++... ..+++..+..++.|++.||.|||..|++||||+|+||+++.++.++|+|||.+........
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---- 153 (253)
T cd05122 78 FCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA---- 153 (253)
T ss_pred cCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc----
Confidence 99999999999775 6899999999999999999999999999999999999999999999999999876532110
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 325 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil 325 (452)
.....|+..|+|||.+.+..++.++|+||||+++
T Consensus 154 ----------------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il 187 (253)
T cd05122 154 ----------------------------------------------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITA 187 (253)
T ss_pred ----------------------------------------------ccceecCCcccCHHHHcCCCCCccccHHHHHHHH
Confidence 1134688999999999988889999999999999
Q ss_pred HHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCC
Q 012988 326 YEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPW 394 (452)
Q Consensus 326 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~ 394 (452)
|+|++|..||...+.......+.. ......+....++..+.++|.+||. ||.+|| ++.+++.|||
T Consensus 188 ~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~---t~~~~l~~~~ 253 (253)
T cd05122 188 IELAEGKPPYSELPPMKALFKIAT-NGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRP---TAEQLLKHPF 253 (253)
T ss_pred HHHHhCCCCCCCCchHHHHHHHHh-cCCCCcCcccccCHHHHHHHHHHccCChhhCC---CHHHHhcCCC
Confidence 999999999987755544444332 2233334333458999999999999 999999 9999999998
No 266
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1e-41 Score=324.27 Aligned_cols=253 Identities=22% Similarity=0.314 Sum_probs=211.2
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccC---CCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKS---GNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYL 161 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~ 161 (452)
.++|++.+.||+|+||+||+|.+..+ ...||+|++.... .......+.+|+.+++.++||||+++++++...+..
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPV 80 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCce
Confidence 46899999999999999999998654 4579999886542 223345678899999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCc
Q 012988 162 YLIMEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCST 240 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~ 240 (452)
++||||+++++|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||+++.+....
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd05033 81 MIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSE 160 (266)
T ss_pred EEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccc
Confidence 9999999999999999764 578999999999999999999999999999999999999999999999999998763110
Q ss_pred chhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhh
Q 012988 241 LYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWS 320 (452)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwS 320 (452)
. ........+++.|+|||.+.+..++.++||||
T Consensus 161 ~-----------------------------------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~s 193 (266)
T cd05033 161 A-----------------------------------------------TYTTKGGKIPIRWTAPEAIAYRKFTSASDVWS 193 (266)
T ss_pred c-----------------------------------------------ceeccCCCCCccccChhhhccCCCccccchHH
Confidence 0 00011223567899999999889999999999
Q ss_pred hhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcC
Q 012988 321 LGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAH 392 (452)
Q Consensus 321 lGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~h 392 (452)
||+++|+|++ |..||...........+... ...|....++..+.+|+.+||. +|.+|| ++.+|+++
T Consensus 194 lG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~cl~~~p~~Rp---~~~ei~~~ 261 (266)
T cd05033 194 FGIVMWEVMSYGERPYWDMSNQDVIKAVEDG---YRLPPPMDCPSALYQLMLDCWQKDRNERP---TFSQIVST 261 (266)
T ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHHHcC---CCCCCCCCCCHHHHHHHHHHcCCCcccCc---CHHHHHHH
Confidence 9999999998 99999887777666666542 2223334678999999999999 999999 89988764
No 267
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.4e-41 Score=322.94 Aligned_cols=252 Identities=31% Similarity=0.525 Sum_probs=209.9
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++|++.+.||+|+||.||+|.+..+|+.||+|.++............+.+|+.+++.++|++|+++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 68999999999999999999999999999999987654444445677889999999999999999999999999999999
Q ss_pred eecCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 166 EYLPGGDMMTLLMR----EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 166 E~~~ggsL~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
||+++|+|..++.. ...+++..+..++.+++.||.|||+.||+||||+|+||+++.+|.++|+|||++..+....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~- 160 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT- 160 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCC-
Confidence 99999999998854 3458999999999999999999999999999999999999999999999999987543110
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSL 321 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSl 321 (452)
.......|++.|+|||++.+..++.++|+|||
T Consensus 161 ------------------------------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~sl 192 (267)
T cd08224 161 ------------------------------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSL 192 (267)
T ss_pred ------------------------------------------------cccceecCCccccCHHHhccCCCCchhcHHHH
Confidence 00113468899999999998899999999999
Q ss_pred hHHHHHhhhCCCCCCCCCh--HHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 322 GAIMYEMLVGYPPFYADDP--ITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 322 Gvil~elltG~~Pf~~~~~--~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
||++|+|++|..||..... ......+... .....|. ..++..+.++|.+||. +|.+|| ++.+|++
T Consensus 193 G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~i~~cl~~~p~~Rp---~~~~il~ 260 (267)
T cd08224 193 GCLLYEMAALQSPFYGDKMNLYSLCKKIEKC-DYPPLPA-DHYSEELRDLVSRCINPDPEKRP---DISYVLQ 260 (267)
T ss_pred HHHHHHHHHCCCCcccCCccHHHHHhhhhcC-CCCCCCh-hhcCHHHHHHHHHHcCCCcccCC---CHHHHHH
Confidence 9999999999999965432 2233333221 1112222 2577899999999999 999999 8888764
No 268
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.8e-42 Score=339.95 Aligned_cols=262 Identities=30% Similarity=0.455 Sum_probs=218.6
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC-----eE
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE-----YL 161 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~-----~~ 161 (452)
+|++.+.||.|+||.||+|.+..++..||+|++.... ......+.+.+|+.+++.++||||+++++++.+.. .+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF-DDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc-ccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 5899999999999999999999999999999987542 12334567888999999999999999999998775 79
Q ss_pred EEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 162 YLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
|+||||++ ++|.+++.....+++..+..++.|++.||.|||+.||+||||||+|||++.++.++|+|||++........
T Consensus 80 ~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~ 158 (330)
T cd07834 80 YIVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDED 158 (330)
T ss_pred EEEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccccc
Confidence 99999996 58999998778999999999999999999999999999999999999999999999999999886542210
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC-CCCccchhhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK-GYGMECDWWS 320 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~-~~~~~~DiwS 320 (452)
. ........||+.|+|||++.+. .++.++|+||
T Consensus 159 ~----------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~s 192 (330)
T cd07834 159 E----------------------------------------------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWS 192 (330)
T ss_pred c----------------------------------------------cccccccccccCcCCceeeecccCCCcchhHHH
Confidence 0 0011234688999999999887 7899999999
Q ss_pred hhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccC------------------C---------CCCCCChhHHHHHHHh
Q 012988 321 LGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKF------------------P---------DDSKLSPEAKDLICRL 373 (452)
Q Consensus 321 lGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~------------------p---------~~~~~s~~~~dLi~~m 373 (452)
||+++|+|++|.+||.+.+..+.+..+......... + ....++.++.+||.+|
T Consensus 193 lG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 272 (330)
T cd07834 193 VGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKM 272 (330)
T ss_pred HHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHH
Confidence 999999999999999988877766666542211110 0 0123678999999999
Q ss_pred hc-CccccCCCCCHHHHhcCCCcCCCC
Q 012988 374 LC-DVEHRLGTGGAHQIKAHPWFKDVV 399 (452)
Q Consensus 374 L~-dp~~R~~~~~~~eil~hp~f~~~~ 399 (452)
|+ +|.+|| ++.+++.||||+++.
T Consensus 273 l~~~P~~Rp---t~~~ll~~~~~~~~~ 296 (330)
T cd07834 273 LVFDPKKRI---TADEALAHPYLAQLH 296 (330)
T ss_pred ccCChhhCC---CHHHHHhCccHHhhc
Confidence 99 999999 999999999998643
No 269
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.5e-41 Score=320.16 Aligned_cols=256 Identities=34% Similarity=0.540 Sum_probs=217.4
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC--CeEEEE
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT--EYLYLI 164 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~--~~~~lV 164 (452)
+|.+.+.||+|++|.||+|.+..++..|++|++...... ....+.+.+|+.+++.++||||+++++.+.+. ..+++|
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 488899999999999999999999999999998765432 34467788999999999999999999999988 899999
Q ss_pred EeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 165 MEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
+||+++++|.+++.....+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||.+.........
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-- 157 (260)
T cd06606 80 LEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG-- 157 (260)
T ss_pred EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc--
Confidence 999999999999988779999999999999999999999999999999999999999999999999998865422100
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHH
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 324 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvi 324 (452)
.......++..|+|||.+.+..++.++|+||||++
T Consensus 158 ---------------------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~i 192 (260)
T cd06606 158 ---------------------------------------------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCT 192 (260)
T ss_pred ---------------------------------------------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHH
Confidence 00113468899999999988889999999999999
Q ss_pred HHHhhhCCCCCCCCC-hHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 325 MYEMLVGYPPFYADD-PITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 325 l~elltG~~Pf~~~~-~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
+|+|++|..||...+ .......+........+|. .++..+.+||.+||. ||.+|| ++.+++.||||
T Consensus 193 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~i~~~l~~~p~~Rp---~~~~ll~~~~~ 260 (260)
T cd06606 193 VIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPE--HLSEEAKDFLRKCLRRDPKKRP---TADELLQHPFL 260 (260)
T ss_pred HHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCc--ccCHHHHHHHHHhCcCChhhCC---CHHHHhhCCCC
Confidence 999999999998766 2233333332222333333 568999999999999 999999 99999999998
No 270
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=7.8e-42 Score=336.31 Aligned_cols=273 Identities=26% Similarity=0.442 Sum_probs=215.2
Q ss_pred CCeeE-eceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccc-----------hHHHHHHHHHHHHHhCCCceeeEEE
Q 012988 86 DDFEL-LTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRG-----------QVEHVRAERNLLAEVASHCIVKLYY 153 (452)
Q Consensus 86 ~~y~i-~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~-----------~~~~~~~E~~il~~l~hp~iv~l~~ 153 (452)
++|.. .+.||.|+||+||+|.+..+++.||+|++......... ....+.+|+.+++.++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 56764 46799999999999999999999999998754322210 1124678999999999999999999
Q ss_pred EEEcCCeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCC
Q 012988 154 SFQDTEYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLC 233 (452)
Q Consensus 154 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla 233 (452)
++...+..|+||||+. |+|.+++.....+++..+..++.|++.||.|||+.||+||||+|+|||++.++.++|+|||++
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~ 166 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLA 166 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccce
Confidence 9999999999999996 699999988888999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC-CC
Q 012988 234 KPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK-GY 312 (452)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~-~~ 312 (452)
................ .. ..........+++.|+|||++.+. .+
T Consensus 167 ~~~~~~~~~~~~~~~~--------------~~---------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~ 211 (335)
T PTZ00024 167 RRYGYPPYSDTLSKDE--------------TM---------------------QRREEMTSKVVTLWYRAPELLMGAEKY 211 (335)
T ss_pred eecccccccccccccc--------------cc---------------------cccccccccccccCCCCChhcccCCCC
Confidence 8664321110000000 00 000011234578899999998764 46
Q ss_pred CccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCccc---CCC---------------------CCCCChhHHH
Q 012988 313 GMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLK---FPD---------------------DSKLSPEAKD 368 (452)
Q Consensus 313 ~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~---~p~---------------------~~~~s~~~~d 368 (452)
+.++|||||||++|+|++|.+||.+.+....+..+........ +|. ....+..+.+
T Consensus 212 ~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (335)
T PTZ00024 212 HFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAID 291 (335)
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHH
Confidence 8999999999999999999999998887776666544211110 000 1245788999
Q ss_pred HHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 369 LICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 369 Li~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
||.+||. +|.+|+ ++++++.||||+.
T Consensus 292 li~~~l~~~P~~R~---s~~~~l~~~~~~~ 318 (335)
T PTZ00024 292 LLQSLLKLNPLERI---SAKEALKHEYFKS 318 (335)
T ss_pred HHHHHcCCCchhcc---CHHHHhcCcccCC
Confidence 9999999 999999 9999999999984
No 271
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.9e-41 Score=319.17 Aligned_cols=253 Identities=33% Similarity=0.588 Sum_probs=219.2
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
+|++.+.||+|++|.||+|.+..+++.||+|.+...... ......+.+|+++++.++|||++++++++.+.+.+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 588999999999999999999999999999999766432 2355678999999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcc
Q 012988 167 YLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHE 246 (452)
Q Consensus 167 ~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~ 246 (452)
|+++++|.+++.....+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||++........
T Consensus 80 ~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~----- 154 (254)
T cd06627 80 YAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK----- 154 (254)
T ss_pred cCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc-----
Confidence 999999999998888899999999999999999999999999999999999999999999999999986542110
Q ss_pred ccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHH
Q 012988 247 HKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 326 (452)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ 326 (452)
......|+..|+|||.+.+..++.++||||||+++|
T Consensus 155 --------------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~ 190 (254)
T cd06627 155 --------------------------------------------DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVI 190 (254)
T ss_pred --------------------------------------------cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHH
Confidence 011345888999999998888899999999999999
Q ss_pred HhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 327 EMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 327 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
+|++|..||...+.......+... ....++ ..++..+.++|.+||. +|++|| ++.+++.||||
T Consensus 191 ~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~i~~~l~~~p~~R~---~~~~~l~~~~~ 254 (254)
T cd06627 191 ELLTGNPPYYDLNPMAALFRIVQD-DHPPLP--EGISPELKDFLMQCFQKDPNLRP---TAKQLLKHPWI 254 (254)
T ss_pred HHHhCCCCCCCccHHHHHHHHhcc-CCCCCC--CCCCHHHHHHHHHHHhCChhhCc---CHHHHhcCCCC
Confidence 999999999877665555444432 222333 3678999999999998 999999 99999999998
No 272
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=8.5e-42 Score=329.41 Aligned_cols=257 Identities=22% Similarity=0.344 Sum_probs=212.0
Q ss_pred CCCCCCCeeEeceeccCCCeEEEEEEEccC-----CCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEE
Q 012988 81 HKICVDDFELLTIIGRGAFGEVRLCREKKS-----GNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYS 154 (452)
Q Consensus 81 ~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~ 154 (452)
..+..++|++.+.||+|+||.||++..... ...+|+|++.... .......+.+|+.+++.+ +|+||++++++
T Consensus 7 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~ 84 (293)
T cd05053 7 WELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGV 84 (293)
T ss_pred cccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence 455668899999999999999999987643 3689999887542 122345688899999999 89999999999
Q ss_pred EEcCCeEEEEEeecCCCChHHHHHh----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEE
Q 012988 155 FQDTEYLYLIMEYLPGGDMMTLLMR----------------EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLL 218 (452)
Q Consensus 155 ~~~~~~~~lV~E~~~ggsL~~~l~~----------------~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIL 218 (452)
+...+.+++||||+++|+|..++.. ...+++..+..++.|++.||.|||+.||+||||||+|||
T Consensus 85 ~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil 164 (293)
T cd05053 85 CTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVL 164 (293)
T ss_pred EcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEE
Confidence 9999999999999999999999854 245888899999999999999999999999999999999
Q ss_pred ECCCCcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccC
Q 012988 219 LDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGT 298 (452)
Q Consensus 219 l~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt 298 (452)
++.++.+||+|||+++.+...... .......++
T Consensus 165 ~~~~~~~kL~Dfg~~~~~~~~~~~-----------------------------------------------~~~~~~~~~ 197 (293)
T cd05053 165 VTEDHVMKIADFGLARDIHHIDYY-----------------------------------------------RKTTNGRLP 197 (293)
T ss_pred EcCCCeEEeCccccccccccccce-----------------------------------------------eccCCCCCC
Confidence 999999999999999865321100 001122356
Q ss_pred CccccchhccCCCCCccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-C
Q 012988 299 PDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-D 376 (452)
Q Consensus 299 ~~y~APE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-d 376 (452)
..|+|||++.+..++.++|||||||++|+|++ |..||.+....+....+... ..... ...++..+.+||.+||. |
T Consensus 198 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~li~~~l~~~ 274 (293)
T cd05053 198 VKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEG-YRMEK--PQNCTQELYHLMRDCWHEV 274 (293)
T ss_pred ccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcC-CcCCC--CCCCCHHHHHHHHHHcccC
Confidence 78999999998899999999999999999997 99999888777766665442 22222 33678999999999999 9
Q ss_pred ccccCCCCCHHHHhcC
Q 012988 377 VEHRLGTGGAHQIKAH 392 (452)
Q Consensus 377 p~~R~~~~~~~eil~h 392 (452)
|.+|| ++.+++++
T Consensus 275 p~~Rp---s~~eil~~ 287 (293)
T cd05053 275 PSQRP---TFKQLVED 287 (293)
T ss_pred cccCc---CHHHHHHH
Confidence 99999 89998864
No 273
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=6.4e-42 Score=337.99 Aligned_cols=259 Identities=31% Similarity=0.503 Sum_probs=210.8
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC-----
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE----- 159 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~----- 159 (452)
.++|.+.+.||+|+||.||+|.+..+|+.||+|++.+... .......+.+|+.+++.++||||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 92 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-SEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF 92 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-cccchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence 3689999999999999999999999999999999875422 2233456788999999999999999999987543
Q ss_pred -eEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCC
Q 012988 160 -YLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDC 238 (452)
Q Consensus 160 -~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~ 238 (452)
.+|+||||+. ++|..++ ...+++..+..++.|++.||.|||+.||+||||||+|||++.+|.+||+|||+++....
T Consensus 93 ~~~~lv~e~~~-~~l~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~ 169 (342)
T cd07879 93 QDFYLVMPYMQ-TDLQKIM--GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADA 169 (342)
T ss_pred ceEEEEecccc-cCHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCC
Confidence 5699999995 4777665 34689999999999999999999999999999999999999999999999999875421
Q ss_pred CcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccch
Q 012988 239 STLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECD 317 (452)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~D 317 (452)
. .....||+.|+|||++.+ ..++.++|
T Consensus 170 ~----------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~D 197 (342)
T cd07879 170 E----------------------------------------------------MTGYVVTRWYRAPEVILNWMHYNQTVD 197 (342)
T ss_pred C----------------------------------------------------CCCceeeecccChhhhcCccccCchHH
Confidence 0 113467889999999876 46899999
Q ss_pred hhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCc---------------------ccCCC------CCCCChhHHHHH
Q 012988 318 WWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNH---------------------LKFPD------DSKLSPEAKDLI 370 (452)
Q Consensus 318 iwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~---------------------~~~p~------~~~~s~~~~dLi 370 (452)
||||||++|+|++|+.||.+.+....+..+...... ...+. .+.++..+.+||
T Consensus 198 v~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 277 (342)
T cd07879 198 IWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLL 277 (342)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHH
Confidence 999999999999999999987765555544331100 00010 124678899999
Q ss_pred HHhhc-CccccCCCCCHHHHhcCCCcCCCCccc
Q 012988 371 CRLLC-DVEHRLGTGGAHQIKAHPWFKDVVWDK 402 (452)
Q Consensus 371 ~~mL~-dp~~R~~~~~~~eil~hp~f~~~~~~~ 402 (452)
.+||+ ||.+|| ++.+++.||||+.+.+..
T Consensus 278 ~~~l~~dP~~R~---~~~e~l~h~~f~~~~~~~ 307 (342)
T cd07879 278 EKMLELDVDKRL---TATEALEHPYFDSFRDAD 307 (342)
T ss_pred HHHcCCChhhCc---CHHHHhcCcchhhccccc
Confidence 99999 999999 999999999999876543
No 274
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=8.1e-42 Score=327.85 Aligned_cols=255 Identities=32% Similarity=0.532 Sum_probs=211.2
Q ss_pred eeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC--CeEEEEE
Q 012988 88 FELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT--EYLYLIM 165 (452)
Q Consensus 88 y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~--~~~~lV~ 165 (452)
|++++.||.|+||.||+|.+..+|+.+|+|++.... ........+.+|+.+++.++|+|++++++++.+. +..|+||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 788999999999999999999999999999998653 2333445678899999999999999999999988 8999999
Q ss_pred eecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 166 EYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 166 E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
||++ ++|..++... ..+++..+..++.|++.||.|||+.|++|+||+|+|||++++|.++|+|||++........
T Consensus 80 e~~~-~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~--- 155 (287)
T cd07840 80 EYMD-HDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS--- 155 (287)
T ss_pred cccc-ccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc---
Confidence 9996 5888888665 5799999999999999999999999999999999999999999999999999886532110
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchhhhhhH
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 323 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~DiwSlGv 323 (452)
.......++..|+|||.+.+ ..++.++||||||+
T Consensus 156 ---------------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~ 190 (287)
T cd07840 156 ---------------------------------------------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGC 190 (287)
T ss_pred ---------------------------------------------ccccccccccccCCceeeEccccCChHHHHHHHHH
Confidence 00112357888999998765 45789999999999
Q ss_pred HHHHhhhCCCCCCCCChHHHHHHHhhccCcc---cCCC-----------------------CCC-CChhHHHHHHHhhc-
Q 012988 324 IMYEMLVGYPPFYADDPITTCRKIVHWRNHL---KFPD-----------------------DSK-LSPEAKDLICRLLC- 375 (452)
Q Consensus 324 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~---~~p~-----------------------~~~-~s~~~~dLi~~mL~- 375 (452)
++|+|++|+.||...+.......+....... .++. ... ++..+.++|.+||.
T Consensus 191 ~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 270 (287)
T cd07840 191 ILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTL 270 (287)
T ss_pred HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCC
Confidence 9999999999999888766666554321111 0000 011 38899999999999
Q ss_pred CccccCCCCCHHHHhcCCCc
Q 012988 376 DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 376 dp~~R~~~~~~~eil~hp~f 395 (452)
+|.+|| ++.+++.||||
T Consensus 271 ~P~~Rp---~~~~~l~~~~~ 287 (287)
T cd07840 271 DPKKRI---SADQALQHEYF 287 (287)
T ss_pred ChhhCc---CHHHHhhCcCC
Confidence 999999 99999999998
No 275
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.4e-41 Score=322.27 Aligned_cols=251 Identities=22% Similarity=0.330 Sum_probs=209.9
Q ss_pred CCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeE
Q 012988 82 KICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYL 161 (452)
Q Consensus 82 ~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~ 161 (452)
++..++|++.+.||+|+||.||+|.+. ++..||+|.+..... ..+.+.+|+.+++.++||||+++++++...+.+
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 76 (261)
T cd05068 2 EIDRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPI 76 (261)
T ss_pred ccchhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc----cHHHHHHHHHHHHHCCCCCccceeEEEecCCCe
Confidence 355678999999999999999999865 457899999865432 235678899999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 162 YLIMEYLPGGDMMTLLMRED--TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
|+||||+++++|.+++.... .++...+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||+++.....
T Consensus 77 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05068 77 YIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKED 156 (261)
T ss_pred eeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCC
Confidence 99999999999999997644 6899999999999999999999999999999999999999999999999998865311
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhh
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWW 319 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Diw 319 (452)
.. .......++..|+|||++.+..++.++|||
T Consensus 157 ~~------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 188 (261)
T cd05068 157 IY------------------------------------------------EAREGAKFPIKWTAPEAALYNRFSIKSDVW 188 (261)
T ss_pred cc------------------------------------------------cccCCCcCceeccCccccccCCCCchhhHH
Confidence 00 000112234679999999988999999999
Q ss_pred hhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 320 SLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 320 SlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
|||+++|+|++ |+.||.+.+.......+... ...+....++..+.++|.+||. +|.+|| ++.++++
T Consensus 189 slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~P~~Rp---~~~~l~~ 256 (261)
T cd05068 189 SFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG---YRMPCPPGCPKELYDIMLDCWKEDPDDRP---TFETLQW 256 (261)
T ss_pred HHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC---CCCCCCCcCCHHHHHHHHHHhhcCcccCC---CHHHHHH
Confidence 99999999999 99999988877777666542 2223334678999999999999 999999 7887763
No 276
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=5.8e-42 Score=333.00 Aligned_cols=268 Identities=30% Similarity=0.483 Sum_probs=210.0
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC------
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT------ 158 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~------ 158 (452)
.++|++++.||.|+||.||+|.++.+++.||+|++..... .......+.+|+.+++.++||||+++++++.+.
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNE-KDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccC-CCCcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 6899999999999999999999999999999999865432 222234567899999999999999999887543
Q ss_pred --CeEEEEEeecCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCcc
Q 012988 159 --EYLYLIMEYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKP 235 (452)
Q Consensus 159 --~~~~lV~E~~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~ 235 (452)
..+|+||||+. ++|...+.. ...+++..++.++.|++.||.|||+.||+||||||+|||+++++.++|+|||++..
T Consensus 86 ~~~~~~lv~~~~~-~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 164 (311)
T cd07866 86 KRGSVYMVTPYMD-HDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARP 164 (311)
T ss_pred cCceEEEEEecCC-cCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchh
Confidence 35799999995 467776654 45799999999999999999999999999999999999999999999999999986
Q ss_pred CCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCc
Q 012988 236 LDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGM 314 (452)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~ 314 (452)
............ ...........|++.|+|||++.+ ..++.
T Consensus 165 ~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ 206 (311)
T cd07866 165 YDGPPPNPKGGG--------------------------------------GGGTRKYTNLVVTRWYRPPELLLGERRYTT 206 (311)
T ss_pred ccCCCcccccCC--------------------------------------cccccccccceeccCcCChHHhhCCCccCc
Confidence 532211000000 000111234578999999998875 45789
Q ss_pred cchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCccc---------------------CCC-----CCCCChhHHH
Q 012988 315 ECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLK---------------------FPD-----DSKLSPEAKD 368 (452)
Q Consensus 315 ~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~---------------------~p~-----~~~~s~~~~d 368 (452)
++|||||||++|+|++|++||.+.+.......+........ .+. ...+++.+.+
T Consensus 207 ~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (311)
T cd07866 207 AVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLD 286 (311)
T ss_pred hhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHH
Confidence 99999999999999999999998887766665543211100 000 1234578899
Q ss_pred HHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 369 LICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 369 Li~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
||.+||. ||.+|| ++.+++.||||
T Consensus 287 ~i~~~l~~~p~~R~---t~~ell~~~~f 311 (311)
T cd07866 287 LLSKLLSLDPYKRL---TASDALEHPYF 311 (311)
T ss_pred HHHHHcccCcccCc---CHHHHhcCCCC
Confidence 9999999 999999 99999999998
No 277
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=2e-41 Score=319.36 Aligned_cols=253 Identities=34% Similarity=0.615 Sum_probs=218.9
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
+|++.+.||.|+||.||+|.+..++..||+|++..... .......+.+|+++++.++|||++++++.+......++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-ChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence 58999999999999999999999999999999875432 22345668889999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcch
Q 012988 167 YLPGGDMMTLLMRE----DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLY 242 (452)
Q Consensus 167 ~~~ggsL~~~l~~~----~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~ 242 (452)
|+++++|.+++... ..+++..+..++.+++.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 157 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV-- 157 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc--
Confidence 99999999999763 679999999999999999999999999999999999999999999999999987653110
Q ss_pred hhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhh
Q 012988 243 AIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLG 322 (452)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlG 322 (452)
.......|++.|+|||.+.+..++.++|+||||
T Consensus 158 -----------------------------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG 190 (258)
T cd08215 158 -----------------------------------------------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLG 190 (258)
T ss_pred -----------------------------------------------ceecceeeeecccChhHhccCCCCccccHHHHH
Confidence 011234688999999999988899999999999
Q ss_pred HHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 323 AIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 323 vil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
+++|+|++|..||...+.......+... .....| ..++..+.++|.+||. +|.+|| ++.+++.||||
T Consensus 191 ~~~~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~i~~~l~~~p~~Rp---~~~~ll~~~~~ 258 (258)
T cd08215 191 CVLYELCTLKHPFEGENLLELALKILKG-QYPPIP--SQYSSELRNLVSSLLQKDPEERP---SIAQILQSPFI 258 (258)
T ss_pred HHHHHHHcCCCCCCCCcHHHHHHHHhcC-CCCCCC--CCCCHHHHHHHHHHcCCChhhCc---CHHHHhcCCCC
Confidence 9999999999999888776666665542 222333 2678999999999999 999999 99999999998
No 278
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.1e-41 Score=321.38 Aligned_cols=245 Identities=24% Similarity=0.324 Sum_probs=202.3
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeecCCC
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGG 171 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~gg 171 (452)
+.||+|+||.||+|.++.+++.||+|.+.... .......+.+|+.+++.++||||+++++++.+...+|+||||++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 78 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence 36999999999999999999999999875432 2233467889999999999999999999999999999999999999
Q ss_pred ChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcccccc
Q 012988 172 DMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTI 250 (452)
Q Consensus 172 sL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~ 250 (452)
+|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.........
T Consensus 79 ~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~-------- 150 (252)
T cd05084 79 DFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYA-------- 150 (252)
T ss_pred cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCccccccccc--------
Confidence 999999664 46899999999999999999999999999999999999999999999999998754311000
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhh
Q 012988 251 DDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 330 (452)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ellt 330 (452)
.......++..|+|||.+.+..++.++|||||||++|+|++
T Consensus 151 ---------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~ 191 (252)
T cd05084 151 ---------------------------------------STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFS 191 (252)
T ss_pred ---------------------------------------ccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHh
Confidence 00001123457999999998889999999999999999997
Q ss_pred -CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 331 -GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 331 -G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
|..||...........+... ..... ...++..+.+||.+||+ +|.+|| ++.++++
T Consensus 192 ~~~~p~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp---s~~~~~~ 248 (252)
T cd05084 192 LGAVPYANLSNQQTREAIEQG-VRLPC--PELCPDAVYRLMERCWEYDPGQRP---SFSTVHQ 248 (252)
T ss_pred CCCCCccccCHHHHHHHHHcC-CCCCC--cccCCHHHHHHHHHHcCCChhhCc---CHHHHHH
Confidence 99999877766555555432 22233 33678999999999999 999999 8888763
No 279
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.1e-41 Score=329.55 Aligned_cols=249 Identities=23% Similarity=0.368 Sum_probs=205.4
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCC--EEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEEcCCeEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGN--IYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQDTEYLY 162 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~~~~ 162 (452)
++|++.+.||+|+||.||+|..+.++. .+++|.++.. ......+.+.+|+.++.++ +||||+++++++...+.+|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF--ASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc--CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 689999999999999999999887765 4688877532 1223345688899999999 7999999999999999999
Q ss_pred EEEeecCCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEE
Q 012988 163 LIMEYLPGGDMMTLLMRED----------------TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMK 226 (452)
Q Consensus 163 lV~E~~~ggsL~~~l~~~~----------------~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ik 226 (452)
+||||+++|+|.+++.... .+++..++.++.|++.||+|||++||+||||||+|||++.++.+|
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEE
Confidence 9999999999999996532 478889999999999999999999999999999999999999999
Q ss_pred EeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchh
Q 012988 227 LSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEV 306 (452)
Q Consensus 227 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~ 306 (452)
|+|||++....... ......++..|+|||+
T Consensus 160 l~dfg~~~~~~~~~--------------------------------------------------~~~~~~~~~~y~aPE~ 189 (297)
T cd05089 160 IADFGLSRGEEVYV--------------------------------------------------KKTMGRLPVRWMAIES 189 (297)
T ss_pred ECCcCCCcccccee--------------------------------------------------ccCCCCcCccccCchh
Confidence 99999986421100 0001123457999999
Q ss_pred ccCCCCCccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC
Q 012988 307 LLKKGYGMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG 384 (452)
Q Consensus 307 ~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~ 384 (452)
+.+..++.++|||||||++|+|++ |..||.+.+.......+... ...+....++..+.+||.+||. +|.+||
T Consensus 190 ~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rp--- 263 (297)
T cd05089 190 LNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---YRMEKPRNCDDEVYELMRQCWRDRPYERP--- 263 (297)
T ss_pred hccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC---CCCCCCCCCCHHHHHHHHHHcCCChhhCc---
Confidence 998899999999999999999997 99999988877766666532 2222233688999999999999 999999
Q ss_pred CHHHHhcC
Q 012988 385 GAHQIKAH 392 (452)
Q Consensus 385 ~~~eil~h 392 (452)
++.++++.
T Consensus 264 ~~~~i~~~ 271 (297)
T cd05089 264 PFAQISVQ 271 (297)
T ss_pred CHHHHHHH
Confidence 88888654
No 280
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.5e-42 Score=338.93 Aligned_cols=261 Identities=22% Similarity=0.346 Sum_probs=204.3
Q ss_pred ceeccC--CCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeecC
Q 012988 92 TIIGRG--AFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLP 169 (452)
Q Consensus 92 ~~LG~G--~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~ 169 (452)
..||.| +||+||+|++..+|+.||+|++...... ....+.+.+|+.+++.++||||++++++|...+.+|+||||+.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCT-EEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence 356666 9999999999999999999998754322 2345678899999999999999999999999999999999999
Q ss_pred CCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccc
Q 012988 170 GGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEH 247 (452)
Q Consensus 170 ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~ 247 (452)
+|+|.+++... ..+++..+..++.|++.||+|||++||+||||||+|||++.++.++++|||.+..........
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~---- 158 (328)
T cd08226 83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA---- 158 (328)
T ss_pred CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc----
Confidence 99999998764 358999999999999999999999999999999999999999999999998654321100000
Q ss_pred cccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC--CCCCccchhhhhhHHH
Q 012988 248 KTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK--KGYGMECDWWSLGAIM 325 (452)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~--~~~~~~~DiwSlGvil 325 (452)
. . .........++..|+|||++.+ ..++.++|||||||++
T Consensus 159 ~-------------------------~-------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l 200 (328)
T cd08226 159 K-------------------------V-------------VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITA 200 (328)
T ss_pred c-------------------------c-------------cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHH
Confidence 0 0 0000001235677999999976 3578999999999999
Q ss_pred HHhhhCCCCCCCCChHHHHHHHhhccCc-------------------------------------------ccCCCCCCC
Q 012988 326 YEMLVGYPPFYADDPITTCRKIVHWRNH-------------------------------------------LKFPDDSKL 362 (452)
Q Consensus 326 ~elltG~~Pf~~~~~~~~~~~i~~~~~~-------------------------------------------~~~p~~~~~ 362 (452)
|+|++|..||...........+...... ...+....+
T Consensus 201 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (328)
T cd08226 201 CELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTF 280 (328)
T ss_pred HHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhh
Confidence 9999999999877655544443321100 011112235
Q ss_pred ChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCC
Q 012988 363 SPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 363 s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
++.+.+||++||+ ||.+|| ++.++++||||+.+
T Consensus 281 ~~~~~~li~~~l~~dP~~Rp---ta~e~l~~~~~~~~ 314 (328)
T cd08226 281 SPAFQNLVELCLQQDPEKRP---SASSLLSHAFFKQV 314 (328)
T ss_pred hHHHHHHHHHHccCCcccCC---CHHHHhhCHHHHHH
Confidence 6789999999999 999999 99999999999753
No 281
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.4e-41 Score=325.61 Aligned_cols=253 Identities=19% Similarity=0.302 Sum_probs=207.4
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEccCCC----EEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREKKSGN----IYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT 158 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~ 158 (452)
+..++|++++.||+|+||+||+|.+..++. .||+|++.... .......+.+|+.+++.+.||||+++++++...
T Consensus 4 l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 81 (279)
T cd05109 4 LKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGVGSPYVCRLLGICLTS 81 (279)
T ss_pred cchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC
Confidence 446789999999999999999999877776 48999886432 222345688899999999999999999998754
Q ss_pred CeEEEEEeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCC
Q 012988 159 EYLYLIMEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLD 237 (452)
Q Consensus 159 ~~~~lV~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~ 237 (452)
..+++|||+++|+|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.+.
T Consensus 82 -~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 82 -TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLD 160 (279)
T ss_pred -CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecc
Confidence 578999999999999999764 578999999999999999999999999999999999999999999999999998653
Q ss_pred CCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccch
Q 012988 238 CSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECD 317 (452)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~D 317 (452)
..... .......+++.|+|||.+.+..++.++|
T Consensus 161 ~~~~~-----------------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~D 193 (279)
T cd05109 161 IDETE-----------------------------------------------YHADGGKVPIKWMALESILHRRFTHQSD 193 (279)
T ss_pred cccce-----------------------------------------------eecCCCccchhhCCHHHhccCCCCchhH
Confidence 21100 0001123567899999999999999999
Q ss_pred hhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 318 WWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 318 iwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
||||||++|||++ |..||...........+... ... +....++.++.++|.+||. ||..|| ++.+++.
T Consensus 194 i~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~li~~~l~~dp~~Rp---~~~~l~~ 263 (279)
T cd05109 194 VWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKG-ERL--PQPPICTIDVYMIMVKCWMIDSECRP---RFRELVD 263 (279)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-CcC--CCCccCCHHHHHHHHHHcCCChhhCc---CHHHHHH
Confidence 9999999999998 99999877665555544432 222 2334688999999999999 999999 8999884
No 282
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=9.5e-42 Score=322.67 Aligned_cols=249 Identities=19% Similarity=0.322 Sum_probs=207.4
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
..+|++.+.||+|+||.||+|.++ ++..+|+|++.+... ....+.+|+.+++.++||||+++++++...+..|+|
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM----SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIV 77 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEE
Confidence 356899999999999999999875 467899999865432 234577899999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 165 MEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
|||++|++|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||+++.+|.+||+|||+++........
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~- 156 (256)
T cd05059 78 TEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT- 156 (256)
T ss_pred EecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceeccccccc-
Confidence 9999999999998763 57899999999999999999999999999999999999999999999999998754311000
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhH
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 323 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGv 323 (452)
......++..|+|||.+.+..++.++||||||+
T Consensus 157 -----------------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~ 189 (256)
T cd05059 157 -----------------------------------------------SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGV 189 (256)
T ss_pred -----------------------------------------------ccCCCCCCccccCHHHhccCCCCchhhHHHHHH
Confidence 000122456799999999999999999999999
Q ss_pred HHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcC
Q 012988 324 IMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAH 392 (452)
Q Consensus 324 il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~h 392 (452)
++|+|++ |..||...+..+....+... ...+....++.++.+++.+||+ +|.+|| ++.++++.
T Consensus 190 il~~l~~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~cl~~~p~~Rp---t~~~~l~~ 254 (256)
T cd05059 190 LMWEVFSEGKMPYERFSNSEVVESVSAG---YRLYRPKLAPTEVYTIMYSCWHEKPEDRP---AFKKLLSQ 254 (256)
T ss_pred HHHHHhccCCCCCCCCCHHHHHHHHHcC---CcCCCCCCCCHHHHHHHHHHhcCChhhCc---CHHHHHHH
Confidence 9999999 89999887777666665432 2222333688999999999998 999999 89998863
No 283
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=3.8e-42 Score=339.75 Aligned_cols=256 Identities=29% Similarity=0.487 Sum_probs=212.9
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCe---
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEY--- 160 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~--- 160 (452)
..++|++.+.||.|+||.||+|.+..++..||+|++.... ........+.+|+.+++.+.||||+++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF-QSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc-chhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 4578999999999999999999999999999999886542 122334567789999999999999999988876554
Q ss_pred ---EEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCC
Q 012988 161 ---LYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLD 237 (452)
Q Consensus 161 ---~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~ 237 (452)
+|+|+||+ +++|.+++.. ..+++..+..++.|++.||.|||+.||+||||||+||+++.+|.++|+|||++....
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~ 169 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTD 169 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccc
Confidence 89999999 7799998854 579999999999999999999999999999999999999999999999999987542
Q ss_pred CCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccc
Q 012988 238 CSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMEC 316 (452)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~ 316 (452)
.. .....+|+.|+|||++.+ ..++.++
T Consensus 170 ~~----------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~ 197 (343)
T cd07851 170 DE----------------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTV 197 (343)
T ss_pred cc----------------------------------------------------ccCCcccccccCHHHHhCCCCCCchH
Confidence 11 113457889999999865 4678999
Q ss_pred hhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCccc--------------------------CC-CCCCCChhHHHH
Q 012988 317 DWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLK--------------------------FP-DDSKLSPEAKDL 369 (452)
Q Consensus 317 DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~--------------------------~p-~~~~~s~~~~dL 369 (452)
|||||||++|+|++|+.||.+.+....+..+........ ++ ....+++.+.+|
T Consensus 198 DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dl 277 (343)
T cd07851 198 DIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDL 277 (343)
T ss_pred hHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHH
Confidence 999999999999999999988877766665544211100 00 012468999999
Q ss_pred HHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 370 ICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 370 i~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
|.+||+ ||.+|| ++.+|+.||||+.
T Consensus 278 i~~~l~~~P~~Rp---t~~ell~h~~~~~ 303 (343)
T cd07851 278 LEKMLVLDPDKRI---TAAEALAHPYLAE 303 (343)
T ss_pred HHHhCCCChhhCC---CHHHHhcCCCccc
Confidence 999999 999999 9999999999985
No 284
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.6e-41 Score=326.01 Aligned_cols=253 Identities=29% Similarity=0.472 Sum_probs=208.3
Q ss_pred eeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh---CCCceeeEEEEEEcCCe----
Q 012988 88 FELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV---ASHCIVKLYYSFQDTEY---- 160 (452)
Q Consensus 88 y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l---~hp~iv~l~~~~~~~~~---- 160 (452)
|++++.||.|+||.||+|.++.+++.||+|++..... .......+.+|+.+++.+ +||||+++++++.+.+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc-cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 7889999999999999999998999999999875432 222234566788887766 59999999999988776
Q ss_pred -EEEEEeecCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCC
Q 012988 161 -LYLIMEYLPGGDMMTLLMRED--TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLD 237 (452)
Q Consensus 161 -~~lV~E~~~ggsL~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~ 237 (452)
++++|||++ ++|.+++.... .+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++..+.
T Consensus 80 ~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~ 158 (287)
T cd07838 80 KLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYS 158 (287)
T ss_pred eeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence 999999996 58988886643 58999999999999999999999999999999999999999999999999987653
Q ss_pred CCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccch
Q 012988 238 CSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECD 317 (452)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~D 317 (452)
... ......|+..|+|||++.+..++.++|
T Consensus 159 ~~~--------------------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~D 188 (287)
T cd07838 159 FEM--------------------------------------------------ALTSVVVTLWYRAPEVLLQSSYATPVD 188 (287)
T ss_pred CCc--------------------------------------------------ccccccccccccChHHhccCCCCCcch
Confidence 110 011235788999999999989999999
Q ss_pred hhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccC---cccCC-----------C---------CCCCChhHHHHHHHhh
Q 012988 318 WWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRN---HLKFP-----------D---------DSKLSPEAKDLICRLL 374 (452)
Q Consensus 318 iwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~---~~~~p-----------~---------~~~~s~~~~dLi~~mL 374 (452)
||||||++|+|++|.+||.+.+..+.+.++..... ...++ . ...+++.+.+||.+||
T Consensus 189 i~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 268 (287)
T cd07838 189 MWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKML 268 (287)
T ss_pred hhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHh
Confidence 99999999999999999998887777666654211 00000 0 0135688899999999
Q ss_pred c-CccccCCCCCHHHHhcCCCc
Q 012988 375 C-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 375 ~-dp~~R~~~~~~~eil~hp~f 395 (452)
+ ||.+|| ++.+++.||||
T Consensus 269 ~~dp~~Rp---~~~~il~~~~~ 287 (287)
T cd07838 269 TFNPHKRI---SAFEALQHPYF 287 (287)
T ss_pred ccCCccCC---CHHHHhcCcCC
Confidence 9 999999 99999999998
No 285
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-42 Score=328.06 Aligned_cols=273 Identities=30% Similarity=0.471 Sum_probs=227.2
Q ss_pred hhcCCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecch----hcccchHHHHHHHHHHHHHhCCCceeeEEE
Q 012988 78 LKRHKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSE----MVKRGQVEHVRAERNLLAEVASHCIVKLYY 153 (452)
Q Consensus 78 ~~~~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~~~~~E~~il~~l~hp~iv~l~~ 153 (452)
++......++|-++..||+|||+.||+|.+...+.+||+|+-.... ..+.+..++..+|..|.+.|+||.||++|+
T Consensus 455 FkDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYD 534 (775)
T KOG1151|consen 455 FKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYD 534 (775)
T ss_pred hccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeee
Confidence 4566677789999999999999999999999999999999864322 223456678899999999999999999999
Q ss_pred EEE-cCCeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--CeeecCCCCCcEEECC---CCcEEE
Q 012988 154 SFQ-DTEYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKH--NYIHRDIKPDNLLLDK---NGHMKL 227 (452)
Q Consensus 154 ~~~-~~~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~--givHrDlkp~NILl~~---~g~ikl 227 (452)
+|. +.+.+|-|+|||+|.+|.-+|+.++.+++.+++.|+.||+.||.||.+. .|||-||||.|||+-. -|.+||
T Consensus 535 yfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKI 614 (775)
T KOG1151|consen 535 YFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKI 614 (775)
T ss_pred eeeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEe
Confidence 995 6678999999999999999999999999999999999999999999986 6999999999999854 478999
Q ss_pred eeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhc
Q 012988 228 SDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVL 307 (452)
Q Consensus 228 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~ 307 (452)
+||||++.++...... . ....++....||.+|++||.+
T Consensus 615 TDFGLSKIMdddSy~~------v------------------------------------dGmeLTSQgAGTYWYLPPEcF 652 (775)
T KOG1151|consen 615 TDFGLSKIMDDDSYNS------V------------------------------------DGMELTSQGAGTYWYLPPECF 652 (775)
T ss_pred eecchhhhccCCccCc------c------------------------------------cceeeecccCceeeecCccee
Confidence 9999999875321100 0 011234467899999999997
Q ss_pred cCC----CCCccchhhhhhHHHHHhhhCCCCCCCCChHH-H--HHHHhhccCcccCCCCCCCChhHHHHHHHhhc-Cccc
Q 012988 308 LKK----GYGMECDWWSLGAIMYEMLVGYPPFYADDPIT-T--CRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEH 379 (452)
Q Consensus 308 ~~~----~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~-~--~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~ 379 (452)
.-+ ..+.++||||+|||+|.++.|+.||....... + ...|++ -..+.||..+.++.++++||++||. .-++
T Consensus 653 vVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlk-AtEVqFP~KPvVsseAkaFIRRCLaYRKeD 731 (775)
T KOG1151|consen 653 VVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILK-ATEVQFPPKPVVSSEAKAFIRRCLAYRKED 731 (775)
T ss_pred ecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhc-ceeccCCCCCccCHHHHHHHHHHHHhhhhh
Confidence 632 35889999999999999999999997543322 2 223333 3567899888999999999999999 8899
Q ss_pred cCCCCCHHHHhcCCCcC
Q 012988 380 RLGTGGAHQIKAHPWFK 396 (452)
Q Consensus 380 R~~~~~~~eil~hp~f~ 396 (452)
|. ++.++..||+|.
T Consensus 732 R~---DV~qLA~dpyll 745 (775)
T KOG1151|consen 732 RI---DVQQLACDPYLL 745 (775)
T ss_pred hh---hHHHHccCcccc
Confidence 99 999999999996
No 286
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.3e-41 Score=328.86 Aligned_cols=260 Identities=27% Similarity=0.447 Sum_probs=210.0
Q ss_pred CCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEEcCC
Q 012988 81 HKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQDTE 159 (452)
Q Consensus 81 ~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~ 159 (452)
..+..++|++.+.||+|+||.||+|.+..+++.||||++.+... ......+..|+.++..+ .||||+++++++.+..
T Consensus 10 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~ 87 (296)
T cd06618 10 YPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN--KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDS 87 (296)
T ss_pred ccCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC--hHHHHHHHHHHHHHHhccCCCchHhhheeeecCC
Confidence 35567899999999999999999999999999999999876432 12234456677666666 4999999999999999
Q ss_pred eEEEEEeecCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCCCcEEECCCCcEEEeeccCCccCC
Q 012988 160 YLYLIMEYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHK-HNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLD 237 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~-~givHrDlkp~NILl~~~g~ikl~DFGla~~~~ 237 (452)
.+|+||||+ +++|.+++.. ...+++..+..++.|++.||.|||+ .||+||||+|+||+++.++.+||+|||++..+.
T Consensus 88 ~~~~v~e~~-~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~ 166 (296)
T cd06618 88 DVFICMELM-STCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLV 166 (296)
T ss_pred eEEEEeecc-CcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhcc
Confidence 999999998 4577777655 4678999999999999999999997 599999999999999999999999999987542
Q ss_pred CCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCC----CC
Q 012988 238 CSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKG----YG 313 (452)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~----~~ 313 (452)
... ......|++.|+|||.+.+.. ++
T Consensus 167 ~~~--------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~ 196 (296)
T cd06618 167 DSK--------------------------------------------------AKTRSAGCAAYMAPERIDPPDPNPKYD 196 (296)
T ss_pred CCC--------------------------------------------------cccCCCCCccccCHhhcCCCCCccccc
Confidence 110 001234788999999987553 78
Q ss_pred ccchhhhhhHHHHHhhhCCCCCCCCCh-HHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 314 MECDWWSLGAIMYEMLVGYPPFYADDP-ITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 314 ~~~DiwSlGvil~elltG~~Pf~~~~~-~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
.++||||||+++|+|++|+.||..... .+.+..+... .....+....++.++.+||.+||. ||.+|| ++.+++.
T Consensus 197 ~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp---~~~~il~ 272 (296)
T cd06618 197 IRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQE-EPPSLPPNEGFSPDFCSFVDLCLTKDHRKRP---KYRELLQ 272 (296)
T ss_pred cchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcC-CCCCCCCCCCCCHHHHHHHHHHccCChhhCC---CHHHHhc
Confidence 899999999999999999999976433 3344444432 222333333578999999999999 999999 9999999
Q ss_pred CCCcCC
Q 012988 392 HPWFKD 397 (452)
Q Consensus 392 hp~f~~ 397 (452)
||||..
T Consensus 273 ~~~~~~ 278 (296)
T cd06618 273 HPFIRR 278 (296)
T ss_pred Chhhhc
Confidence 999984
No 287
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.1e-41 Score=331.07 Aligned_cols=259 Identities=22% Similarity=0.335 Sum_probs=209.9
Q ss_pred hcCCCCCCCeeEeceeccCCCeEEEEEEEcc-------CCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceee
Q 012988 79 KRHKICVDDFELLTIIGRGAFGEVRLCREKK-------SGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVK 150 (452)
Q Consensus 79 ~~~~~~~~~y~i~~~LG~G~~g~V~~a~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~ 150 (452)
++..+..++|.+.+.||+|+||.||+|.+.. ++..+|+|.+.... .......+..|+.+++.+ +||||++
T Consensus 11 ~~~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~ 88 (307)
T cd05098 11 PRWEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIIN 88 (307)
T ss_pred CcceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEee
Confidence 3456667899999999999999999998643 23579999987542 223345678899999999 7999999
Q ss_pred EEEEEEcCCeEEEEEeecCCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCC
Q 012988 151 LYYSFQDTEYLYLIMEYLPGGDMMTLLMRED----------------TLTENVARFYIAQSVLAIESIHKHNYIHRDIKP 214 (452)
Q Consensus 151 l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~----------------~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp 214 (452)
+++++...+.+|+||||+++|+|.+++.... .++...+..++.|++.||+|||++||+||||||
T Consensus 89 ~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp 168 (307)
T cd05098 89 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAA 168 (307)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccH
Confidence 9999999999999999999999999997542 478888999999999999999999999999999
Q ss_pred CcEEECCCCcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccc
Q 012988 215 DNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFS 294 (452)
Q Consensus 215 ~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (452)
+|||++.++.+||+|||+++.+...... .....
T Consensus 169 ~Nill~~~~~~kL~dfg~a~~~~~~~~~-----------------------------------------------~~~~~ 201 (307)
T cd05098 169 RNVLVTEDNVMKIADFGLARDIHHIDYY-----------------------------------------------KKTTN 201 (307)
T ss_pred HheEEcCCCcEEECCCcccccccccchh-----------------------------------------------hcccc
Confidence 9999999999999999998754311000 00011
Q ss_pred cccCCccccchhccCCCCCccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHh
Q 012988 295 TVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRL 373 (452)
Q Consensus 295 ~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~m 373 (452)
..+++.|+|||++.+..++.++|||||||++|+|++ |..||.+....+....+.. ......| ..++.++.+||.+|
T Consensus 202 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~li~~~ 278 (307)
T cd05098 202 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE-GHRMDKP--SNCTNELYMMMRDC 278 (307)
T ss_pred CCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHc-CCCCCCC--CcCCHHHHHHHHHH
Confidence 234578999999998889999999999999999998 8899987776655555443 2222333 36789999999999
Q ss_pred hc-CccccCCCCCHHHHhcC
Q 012988 374 LC-DVEHRLGTGGAHQIKAH 392 (452)
Q Consensus 374 L~-dp~~R~~~~~~~eil~h 392 (452)
|. +|.+|| ++.+++++
T Consensus 279 l~~~p~~Rp---s~~evl~~ 295 (307)
T cd05098 279 WHAVPSQRP---TFKQLVED 295 (307)
T ss_pred cccChhhCc---CHHHHHHH
Confidence 98 999999 88888753
No 288
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.4e-41 Score=329.80 Aligned_cols=257 Identities=23% Similarity=0.312 Sum_probs=210.6
Q ss_pred CCCCCCCeeEeceeccCCCeEEEEEEEc-----cCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEE
Q 012988 81 HKICVDDFELLTIIGRGAFGEVRLCREK-----KSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYS 154 (452)
Q Consensus 81 ~~~~~~~y~i~~~LG~G~~g~V~~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~ 154 (452)
+++..++|.+.+.||+|+||.||+|.+. .++..||+|+++... .....+.+.+|+.+++.+ +||||++++++
T Consensus 30 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 107 (302)
T cd05055 30 WEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA--HSSEREALMSELKIMSHLGNHENIVNLLGA 107 (302)
T ss_pred ccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC--ChHHHHHHHHHHHHHHhccCCCCcceEEEE
Confidence 4566678999999999999999999753 345689999886542 223346788999999999 79999999999
Q ss_pred EEcCCeEEEEEeecCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccC
Q 012988 155 FQDTEYLYLIMEYLPGGDMMTLLMRED--TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGL 232 (452)
Q Consensus 155 ~~~~~~~~lV~E~~~ggsL~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGl 232 (452)
+...+.+|+||||+++|+|.+++.... .+++..+..++.|++.||.|||++||+|+||||+|||++.++.++|+|||+
T Consensus 108 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~ 187 (302)
T cd05055 108 CTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGL 187 (302)
T ss_pred EecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcc
Confidence 999999999999999999999997643 389999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCC
Q 012988 233 CKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGY 312 (452)
Q Consensus 233 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 312 (452)
++.+...... .......+++.|+|||++.+..+
T Consensus 188 ~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~ 220 (302)
T cd05055 188 ARDIMNDSNY-----------------------------------------------VVKGNARLPVKWMAPESIFNCVY 220 (302)
T ss_pred cccccCCCce-----------------------------------------------eecCCCCcccccCCHhhhccCCC
Confidence 8765311000 00112346788999999999899
Q ss_pred CccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHh
Q 012988 313 GMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIK 390 (452)
Q Consensus 313 ~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil 390 (452)
+.++|||||||++|+|++ |..||........+....... ...+.....++++.+||.+||. +|.+|| ++.+++
T Consensus 221 ~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~cl~~~p~~Rp---t~~ell 295 (302)
T cd05055 221 TFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEG--YRMAQPEHAPAEIYDIMKTCWDADPLKRP---TFKQIV 295 (302)
T ss_pred CcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcC--CcCCCCCCCCHHHHHHHHHHcCCCchhCc---CHHHHH
Confidence 999999999999999998 999998776655554444322 2222233678999999999998 999999 888887
Q ss_pred c
Q 012988 391 A 391 (452)
Q Consensus 391 ~ 391 (452)
.
T Consensus 296 ~ 296 (302)
T cd05055 296 Q 296 (302)
T ss_pred H
Confidence 4
No 289
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=8.6e-42 Score=337.06 Aligned_cols=260 Identities=26% Similarity=0.417 Sum_probs=208.2
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC------
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT------ 158 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~------ 158 (452)
..+|++.+.||.|+||.||+|.++.+|..||+|++..... .....+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP---QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC---chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccc
Confidence 3689999999999999999999999999999999865432 3456688899999999999999999776543
Q ss_pred --------CeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECC-CCcEEEee
Q 012988 159 --------EYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDK-NGHMKLSD 229 (452)
Q Consensus 159 --------~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~-~g~ikl~D 229 (452)
..+|+||||++ ++|.+++. .+.+++..++.++.|++.||.|||+.||+||||||+|||++. ++.+||+|
T Consensus 81 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~d 158 (342)
T cd07854 81 DVGSLTELNSVYIVQEYME-TDLANVLE-QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGD 158 (342)
T ss_pred ccccccccceEEEEeeccc-ccHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECC
Confidence 36899999996 58888774 457999999999999999999999999999999999999985 55789999
Q ss_pred ccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC
Q 012988 230 FGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK 309 (452)
Q Consensus 230 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~ 309 (452)
||++..+...... ........|+..|+|||++.+
T Consensus 159 fg~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~y~aPE~~~~ 192 (342)
T cd07854 159 FGLARIVDPHYSH----------------------------------------------KGYLSEGLVTKWYRSPRLLLS 192 (342)
T ss_pred cccceecCCcccc----------------------------------------------ccccccccccccccCHHHHhC
Confidence 9998765321000 000112357889999998765
Q ss_pred -CCCCccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccC-----------------------cccCC---CCCCC
Q 012988 310 -KGYGMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRN-----------------------HLKFP---DDSKL 362 (452)
Q Consensus 310 -~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~-----------------------~~~~p---~~~~~ 362 (452)
..++.++|||||||++|+|++|+.||.+.+.......+..... ....+ ....+
T Consensus 193 ~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (342)
T cd07854 193 PNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGV 272 (342)
T ss_pred ccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCC
Confidence 5678999999999999999999999988776555544432100 00000 01247
Q ss_pred ChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCC
Q 012988 363 SPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 363 s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
+.++.+||.+||+ ||.+|| ++.+++.||||+.+
T Consensus 273 ~~~~~~li~~~L~~dP~~R~---t~~ell~h~~~~~~ 306 (342)
T cd07854 273 NPEALDFLEQILTFNPMDRL---TAEEALMHPYMSCY 306 (342)
T ss_pred CHHHHHHHHHHhCCCchhcc---CHHHHhCCCccccc
Confidence 8899999999999 999999 99999999999854
No 290
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.2e-41 Score=326.35 Aligned_cols=253 Identities=23% Similarity=0.394 Sum_probs=209.4
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEc-----cCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEc
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREK-----KSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQD 157 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~ 157 (452)
+...+|++.++||+|+||.||+|... .++..+|+|.+.... ......+.+|+.+++.++|+||+++++++.+
T Consensus 2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 78 (280)
T cd05092 2 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAELLTVLQHQHIVRFYGVCTE 78 (280)
T ss_pred CChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC---HHHHHHHHHHHHHHhcCCCCCCceEEEEEec
Confidence 34567999999999999999999743 356789999876432 2345678899999999999999999999999
Q ss_pred CCeEEEEEeecCCCChHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCC
Q 012988 158 TEYLYLIMEYLPGGDMMTLLMRED---------------TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKN 222 (452)
Q Consensus 158 ~~~~~lV~E~~~ggsL~~~l~~~~---------------~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~ 222 (452)
.+..++||||+++|+|.+++.... .+++..+..++.|++.||.|||+.||+||||||+|||++++
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~ 158 (280)
T cd05092 79 GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQG 158 (280)
T ss_pred CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCC
Confidence 999999999999999999987643 47889999999999999999999999999999999999999
Q ss_pred CcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccc
Q 012988 223 GHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYI 302 (452)
Q Consensus 223 g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~ 302 (452)
+.+||+|||++........ ........+++.|+
T Consensus 159 ~~~kL~dfg~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~y~ 191 (280)
T cd05092 159 LVVKIGDFGMSRDIYSTDY-----------------------------------------------YRVGGRTMLPIRWM 191 (280)
T ss_pred CCEEECCCCceeEcCCCce-----------------------------------------------eecCCCcccccccc
Confidence 9999999999875431100 00011234678899
Q ss_pred cchhccCCCCCccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-Ccccc
Q 012988 303 APEVLLKKGYGMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHR 380 (452)
Q Consensus 303 APE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R 380 (452)
|||.+.+..++.++|||||||++|+|++ |.+||...........+.... ....+ ..+++.+.+||.+||+ ||.+|
T Consensus 192 aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~li~~cl~~~P~~R 268 (280)
T cd05092 192 PPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGR-ELERP--RTCPPEVYAIMQGCWQREPQQR 268 (280)
T ss_pred CHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCc-cCCCC--CCCCHHHHHHHHHHccCChhhC
Confidence 9999999999999999999999999998 999998877777666665432 22223 3688999999999999 99999
Q ss_pred CCCCCHHHHhc
Q 012988 381 LGTGGAHQIKA 391 (452)
Q Consensus 381 ~~~~~~~eil~ 391 (452)
| ++.+|+.
T Consensus 269 p---~~~~l~~ 276 (280)
T cd05092 269 M---VIKDIHS 276 (280)
T ss_pred C---CHHHHHH
Confidence 9 8888764
No 291
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=5.6e-42 Score=329.01 Aligned_cols=254 Identities=19% Similarity=0.295 Sum_probs=210.1
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccC-----CCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKS-----GNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT 158 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~ 158 (452)
...+|++++.||+|+||+||+|.+..+ +..||+|++.... .......+..|+.++..++||||+++++++.+.
T Consensus 3 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~ 80 (283)
T cd05091 3 NLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE 80 (283)
T ss_pred CHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC
Confidence 456788999999999999999987543 5789999987442 222345688899999999999999999999999
Q ss_pred CeEEEEEeecCCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCC
Q 012988 159 EYLYLIMEYLPGGDMMTLLMRE----------------DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKN 222 (452)
Q Consensus 159 ~~~~lV~E~~~ggsL~~~l~~~----------------~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~ 222 (452)
+..++++||+++++|..++... ..++...+..++.|++.||.|||++||+||||||+|||++.+
T Consensus 81 ~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~ 160 (283)
T cd05091 81 QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDK 160 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCC
Confidence 9999999999999999998532 347888899999999999999999999999999999999999
Q ss_pred CcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccc
Q 012988 223 GHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYI 302 (452)
Q Consensus 223 g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~ 302 (452)
+.+||+|||+++....... ........+++.|+
T Consensus 161 ~~~kl~Dfg~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~y~ 193 (283)
T cd05091 161 LNVKISDLGLFREVYAADY-----------------------------------------------YKLMGNSLLPIRWM 193 (283)
T ss_pred CceEecccccccccccchh-----------------------------------------------eeeccCccCCcccc
Confidence 9999999999886531110 00111334678999
Q ss_pred cchhccCCCCCccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-Ccccc
Q 012988 303 APEVLLKKGYGMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHR 380 (452)
Q Consensus 303 APE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R 380 (452)
|||.+.+..++.++|||||||++|||++ |..||.+....+....+.... ....+ ..++..+.+||.+||+ +|.+|
T Consensus 194 aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~-~~~~~--~~~~~~~~~li~~cl~~~p~~R 270 (283)
T cd05091 194 SPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQ-VLPCP--DDCPAWVYTLMLECWNEFPSRR 270 (283)
T ss_pred CHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-cCCCC--CCCCHHHHHHHHHHhCCCcccC
Confidence 9999988889999999999999999998 889998888777777666532 22233 3688999999999998 99999
Q ss_pred CCCCCHHHHhcC
Q 012988 381 LGTGGAHQIKAH 392 (452)
Q Consensus 381 ~~~~~~~eil~h 392 (452)
| ++.+|+..
T Consensus 271 P---~~~~i~~~ 279 (283)
T cd05091 271 P---RFKDIHSR 279 (283)
T ss_pred C---CHHHHHHH
Confidence 9 89998753
No 292
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=2e-41 Score=320.70 Aligned_cols=249 Identities=21% Similarity=0.350 Sum_probs=208.1
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
.++|++++.||+|+||+||+|.... +..+|+|.+..... ....+.+|+.+++.++||||+++++++.+...+|+|
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM----SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIV 77 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc----cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEE
Confidence 4679999999999999999997654 45699998865432 235678899999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 165 MEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
|||+.+|+|.+++... ..+++..+..++.|++.||.|||+.||+|+||||+|||++.++.+||+|||+++.......
T Consensus 78 ~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~-- 155 (256)
T cd05113 78 TEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY-- 155 (256)
T ss_pred EEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCce--
Confidence 9999999999999764 4789999999999999999999999999999999999999999999999999875431100
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhH
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 323 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGv 323 (452)
.......++..|+|||++.+..++.++|||||||
T Consensus 156 ----------------------------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~ 189 (256)
T cd05113 156 ----------------------------------------------TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGV 189 (256)
T ss_pred ----------------------------------------------eecCCCccChhhCCHHHHhcCcccchhHHHHHHH
Confidence 0001223567899999998888999999999999
Q ss_pred HHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcC
Q 012988 324 IMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAH 392 (452)
Q Consensus 324 il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~h 392 (452)
++|+|++ |..||...+.......+.... .. +.....+..+.++|.+||. ||.+|| ++.+|+.+
T Consensus 190 ~l~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~li~~cl~~~p~~Rp---~~~~ll~~ 254 (256)
T cd05113 190 LMWEVYSLGKMPYERFNNSETVEKVSQGL-RL--YRPHLASEKVYAIMYSCWHEKAEERP---TFQQLLSS 254 (256)
T ss_pred HHHHHhcCCCCCcCcCCHHHHHHHHhcCC-CC--CCCCCCCHHHHHHHHHHcCCCcccCC---CHHHHHHh
Confidence 9999998 999998877777666665432 22 2223568999999999999 999999 89998864
No 293
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1e-41 Score=329.12 Aligned_cols=253 Identities=31% Similarity=0.548 Sum_probs=212.3
Q ss_pred eeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEee
Q 012988 88 FELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEY 167 (452)
Q Consensus 88 y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~ 167 (452)
|+...+||+|+||.||++..+.++..||+|++.... ......+.+|+.+++.++|+||+++++++...+..|+||||
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 98 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 98 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc---hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEec
Confidence 344568999999999999999999999999875332 22345688899999999999999999999999999999999
Q ss_pred cCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccc
Q 012988 168 LPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEH 247 (452)
Q Consensus 168 ~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~ 247 (452)
+++++|.+++. ...+++..++.++.|++.||.|||+.||+||||+|+||+++.++.++|+|||++.......
T Consensus 99 ~~~~~L~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~------- 170 (292)
T cd06657 99 LEGGALTDIVT-HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV------- 170 (292)
T ss_pred CCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceeccccc-------
Confidence 99999998774 4578999999999999999999999999999999999999999999999999876542110
Q ss_pred cccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHH
Q 012988 248 KTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 327 (452)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~e 327 (452)
.......||+.|+|||.+.+..++.++|+||||+++|+
T Consensus 171 ------------------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~e 208 (292)
T cd06657 171 ------------------------------------------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE 208 (292)
T ss_pred ------------------------------------------ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHH
Confidence 00113458899999999988888999999999999999
Q ss_pred hhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 328 MLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 328 lltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
|++|..||.+.+.......+... ....++....+++.+.++|.+||. ||.+|+ ++.+++.||||..
T Consensus 209 l~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~---~~~~ll~~~~~~~ 275 (292)
T cd06657 209 MVDGEPPYFNEPPLKAMKMIRDN-LPPKLKNLHKVSPSLKGFLDRLLVRDPAQRA---TAAELLKHPFLAK 275 (292)
T ss_pred HHhCCCCCCCCCHHHHHHHHHhh-CCcccCCcccCCHHHHHHHHHHHhCCcccCc---CHHHHhcChHHhc
Confidence 99999999887766555544321 122222334678999999999999 999999 9999999999984
No 294
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.9e-41 Score=321.97 Aligned_cols=249 Identities=24% Similarity=0.386 Sum_probs=205.7
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEE
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLY 162 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~ 162 (452)
+..++|++.++||+|+||.||+|.+..+ ..||+|++.+... ....+.+|+.+++.++||||+++++.+.. ...|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~ 76 (262)
T cd05071 3 IPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIY 76 (262)
T ss_pred CChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc----CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcE
Confidence 4567899999999999999999988655 4699999875322 23467889999999999999999998754 5689
Q ss_pred EEEeecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCc
Q 012988 163 LIMEYLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCST 240 (452)
Q Consensus 163 lV~E~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~ 240 (452)
+||||+++|+|.+++... ..+++..+..++.|++.||.|||+.||+||||||+|||++.++.++|+|||++..+....
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~ 156 (262)
T cd05071 77 IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 156 (262)
T ss_pred EEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccc
Confidence 999999999999999763 458899999999999999999999999999999999999999999999999987653211
Q ss_pred chhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhh
Q 012988 241 LYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWS 320 (452)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwS 320 (452)
. .......++..|+|||++.+..++.++||||
T Consensus 157 ~------------------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dvws 188 (262)
T cd05071 157 Y------------------------------------------------TARQGAKFPIKWTAPEAALYGRFTIKSDVWS 188 (262)
T ss_pred c------------------------------------------------ccccCCcccceecCHhHhccCCCCchhhHHH
Confidence 0 0001234677899999998889999999999
Q ss_pred hhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 321 LGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 321 lGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
|||++|+|++ |..||.+.........+... . ..+....++..+.+||.+||. ||.+|| ++.++++
T Consensus 189 lG~~l~ellt~g~~p~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~l~~li~~~l~~~p~~Rp---~~~~~~~ 255 (262)
T cd05071 189 FGILLTELTTKGRVPYPGMVNREVLDQVERG-Y--RMPCPPECPESLHDLMCQCWRKEPEERP---TFEYLQA 255 (262)
T ss_pred HHHHHHHHHcCCCCCCCCCChHHHHHHHhcC-C--CCCCccccCHHHHHHHHHHccCCcccCC---CHHHHHH
Confidence 9999999999 89999888777766666432 1 223334688999999999999 999999 7777654
No 295
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1.3e-41 Score=336.23 Aligned_cols=256 Identities=30% Similarity=0.479 Sum_probs=209.1
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC-----
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT----- 158 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~----- 158 (452)
..++|++++.||+|+||.||+|.+..+|+.||+|++.+... .....+.+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~ 93 (345)
T cd07877 15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 93 (345)
T ss_pred ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch-hhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccc
Confidence 45889999999999999999999999999999999875421 222345677899999999999999999988643
Q ss_pred -CeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCC
Q 012988 159 -EYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLD 237 (452)
Q Consensus 159 -~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~ 237 (452)
..+|++++++ +++|.+++.. ..+++..++.++.|++.||.|||+.||+||||||+||+++.+|.+||+|||++....
T Consensus 94 ~~~~~lv~~~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~ 171 (345)
T cd07877 94 FNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 171 (345)
T ss_pred cccEEEEehhc-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccccccc
Confidence 3478899987 8899888754 469999999999999999999999999999999999999999999999999987532
Q ss_pred CCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccc
Q 012988 238 CSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMEC 316 (452)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~ 316 (452)
.. .....||+.|+|||++.+ ..++.++
T Consensus 172 ~~----------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~ 199 (345)
T cd07877 172 DE----------------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTV 199 (345)
T ss_pred cc----------------------------------------------------ccccccCCCccCHHHHhCccCCCchh
Confidence 10 113468899999999876 5688999
Q ss_pred hhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCc---------------------ccCCC------CCCCChhHHHH
Q 012988 317 DWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNH---------------------LKFPD------DSKLSPEAKDL 369 (452)
Q Consensus 317 DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~---------------------~~~p~------~~~~s~~~~dL 369 (452)
|||||||++|+|++|+.||...+.......+...... ...|. ....++++.+|
T Consensus 200 DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 279 (345)
T cd07877 200 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDL 279 (345)
T ss_pred hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHH
Confidence 9999999999999999999877665554444321110 00110 11357889999
Q ss_pred HHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 370 ICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 370 i~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
|.+||+ ||.+|+ ++.+++.||||..
T Consensus 280 i~~~L~~dp~~R~---t~~e~l~h~~f~~ 305 (345)
T cd07877 280 LEKMLVLDSDKRI---TAAQALAHAYFAQ 305 (345)
T ss_pred HHHHcCCChhhcC---CHHHHhcChhhhh
Confidence 999999 999999 9999999999985
No 296
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2e-41 Score=320.61 Aligned_cols=245 Identities=25% Similarity=0.378 Sum_probs=201.7
Q ss_pred eeccCCCeEEEEEEE--ccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeecCC
Q 012988 93 IIGRGAFGEVRLCRE--KKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPG 170 (452)
Q Consensus 93 ~LG~G~~g~V~~a~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~g 170 (452)
+||+|+||.||+|.. ..++..+|+|++.... ......+.+.+|+.+++.++||||+++++++.. +..++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCC
Confidence 689999999999965 4568899999986442 223345678899999999999999999998764 567899999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcccccc
Q 012988 171 GDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTI 250 (452)
Q Consensus 171 gsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~ 250 (452)
|+|.+++.....+++..+..++.|++.||.|||++||+||||||.|||++.++.+||+|||+++.+......
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~-------- 151 (257)
T cd05116 80 GPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY-------- 151 (257)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCe--------
Confidence 999999988888999999999999999999999999999999999999999999999999998865322100
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhh
Q 012988 251 DDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 330 (452)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ellt 330 (452)
........+++.|+|||.+....++.++|||||||++|||++
T Consensus 152 --------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t 193 (257)
T cd05116 152 --------------------------------------YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFS 193 (257)
T ss_pred --------------------------------------eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHh
Confidence 000112235678999999988889999999999999999998
Q ss_pred -CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 331 -GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 331 -G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
|..||...+.......+... .....| ..+++++++||.+|++ ||.+|| ++.+|..
T Consensus 194 ~g~~p~~~~~~~~~~~~i~~~-~~~~~~--~~~~~~l~~li~~~~~~~p~~Rp---~~~~i~~ 250 (257)
T cd05116 194 YGQKPYKGMKGNEVTQMIESG-ERMECP--QRCPPEMYDLMKLCWTYGVDERP---GFAVVEL 250 (257)
T ss_pred CCCCCCCCCCHHHHHHHHHCC-CCCCCC--CCCCHHHHHHHHHHhccCchhCc---CHHHHHH
Confidence 99999887777666666542 223333 3689999999999999 999999 7777653
No 297
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.5e-41 Score=329.09 Aligned_cols=261 Identities=31% Similarity=0.513 Sum_probs=211.2
Q ss_pred CCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC--
Q 012988 82 KICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE-- 159 (452)
Q Consensus 82 ~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~-- 159 (452)
....++|++.+.||+|+||.||+|.++.+|+.||+|++..... .......+.+|+.+++.++||||+++++++.+..
T Consensus 3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~ 81 (302)
T cd07864 3 KRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE-KEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDA 81 (302)
T ss_pred hhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccc-ccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchh
Confidence 3456789999999999999999999999999999999875432 2223356678999999999999999999987654
Q ss_pred --------eEEEEEeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeec
Q 012988 160 --------YLYLIMEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDF 230 (452)
Q Consensus 160 --------~~~lV~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DF 230 (452)
.+|+||||+++ ++...+... ..+++..++.++.|++.||.|||+.||+||||||+||+++.++.+||+||
T Consensus 82 ~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~df 160 (302)
T cd07864 82 LDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADF 160 (302)
T ss_pred hhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcc
Confidence 79999999975 677776553 47899999999999999999999999999999999999999999999999
Q ss_pred cCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-
Q 012988 231 GLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK- 309 (452)
Q Consensus 231 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~- 309 (452)
|++..+..... .......++..|+|||.+.+
T Consensus 161 g~~~~~~~~~~------------------------------------------------~~~~~~~~~~~y~~PE~~~~~ 192 (302)
T cd07864 161 GLARLYNSEES------------------------------------------------RPYTNKVITLWYRPPELLLGE 192 (302)
T ss_pred cccccccCCcc------------------------------------------------cccccceeccCccChHHhcCC
Confidence 99886532110 00112346788999998865
Q ss_pred CCCCccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcc---cC-----------------------CCCCCCC
Q 012988 310 KGYGMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHL---KF-----------------------PDDSKLS 363 (452)
Q Consensus 310 ~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~---~~-----------------------p~~~~~s 363 (452)
..++.++|||||||++|+|++|++||...+....+..+....... .+ .....++
T Consensus 193 ~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (302)
T cd07864 193 ERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIP 272 (302)
T ss_pred CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCC
Confidence 457899999999999999999999998877666655554321100 00 0112468
Q ss_pred hhHHHHHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 364 PEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 364 ~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
..+.+||.+||. ||.+|| ++.+++.||||
T Consensus 273 ~~~~~li~~~l~~~P~~Rp---~~~~il~~~~~ 302 (302)
T cd07864 273 TPALDLLDHMLTLDPSKRC---TAEEALNSPWL 302 (302)
T ss_pred HHHHHHHHHHccCChhhCC---CHHHHhcCCCC
Confidence 999999999999 999999 99999999997
No 298
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=7.8e-42 Score=323.84 Aligned_cols=249 Identities=22% Similarity=0.343 Sum_probs=211.1
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEE
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYL 163 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~l 163 (452)
...+|++++.||.|+||.||+|.+.. +..+|+|++..... .....+..|+.+++.++||||+++++++.+...+++
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDL---LKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYI 79 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccch---hhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEE
Confidence 34679999999999999999999887 89999999876532 224567889999999999999999999999999999
Q ss_pred EEeecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 164 IMEYLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 164 V~E~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
||||+++|+|.+++... ..++...+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~ 159 (261)
T cd05148 80 ITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY 159 (261)
T ss_pred EEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccc
Confidence 99999999999999753 4689999999999999999999999999999999999999999999999999876531100
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSL 321 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSl 321 (452)
......++..|+|||++.+..++.++|||||
T Consensus 160 -------------------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Diwsl 190 (261)
T cd05148 160 -------------------------------------------------LSSDKKIPYKWTAPEAASHGTFSTKSDVWSF 190 (261)
T ss_pred -------------------------------------------------cccCCCCceEecCHHHHccCCCCchhhHHHH
Confidence 0012235678999999998889999999999
Q ss_pred hHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 322 GAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 322 Gvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
|+++|+|++ |..||.+.+....+..+.. ....+....+++.+.++|.+||+ ||.+|| ++.++++
T Consensus 191 G~~l~~l~~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp---t~~~l~~ 256 (261)
T cd05148 191 GILLYEMFTYGQVPYPGMNNHEVYDQITA---GYRMPCPAKCPQEIYKIMLECWAAEPEDRP---SFKALRE 256 (261)
T ss_pred HHHHHHHHcCCCCCCCcCCHHHHHHHHHh---CCcCCCCCCCCHHHHHHHHHHcCCCchhCc---CHHHHHH
Confidence 999999998 8999988887777776653 22233334788999999999999 999999 8887764
No 299
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-42 Score=341.11 Aligned_cols=259 Identities=27% Similarity=0.403 Sum_probs=219.7
Q ss_pred hcCCCCCCCeeEeceeccCCCeEEEEEEEccCCC---E-EEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEE
Q 012988 79 KRHKICVDDFELLTIIGRGAFGEVRLCREKKSGN---I-YAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYS 154 (452)
Q Consensus 79 ~~~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~---~-vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~ 154 (452)
..+++..++-.+.++||+|+||.||+|..+..+. . ||+|..+.+......++..+.+|+++|+.++|||||++||+
T Consensus 150 ~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGV 229 (474)
T KOG0194|consen 150 QKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGV 229 (474)
T ss_pred cccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence 3466667778888999999999999999876533 3 89998876555567788899999999999999999999999
Q ss_pred EEcCCeEEEEEeecCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCC
Q 012988 155 FQDTEYLYLIMEYLPGGDMMTLLMRED-TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLC 233 (452)
Q Consensus 155 ~~~~~~~~lV~E~~~ggsL~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla 233 (452)
..+...+++|||+|+||+|.++|++++ .++..+...++.+.+.||+|||++++|||||...|+|++.++.+||+|||++
T Consensus 230 a~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs 309 (474)
T KOG0194|consen 230 AVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLS 309 (474)
T ss_pred EcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccc
Confidence 999999999999999999999999876 5999999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCC
Q 012988 234 KPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYG 313 (452)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 313 (452)
+.... +.. . .....-...|+|||.+...-|+
T Consensus 310 ~~~~~---~~~------~----------------------------------------~~~~klPirWLAPEtl~~~~~s 340 (474)
T KOG0194|consen 310 RAGSQ---YVM------K----------------------------------------KFLKKLPIRWLAPETLNTGIFS 340 (474)
T ss_pred cCCcc---eee------c----------------------------------------cccccCcceecChhhhccCccc
Confidence 75420 000 0 0001134579999999999999
Q ss_pred ccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 314 MECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 314 ~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
.++|||||||++||+++ |..||.+....+....|.........|. ..+.++..++.+|+. ||++|+ ++.++.+
T Consensus 341 ~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~--~~p~~~~~~~~~c~~~~p~~R~---tm~~i~~ 415 (474)
T KOG0194|consen 341 FKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPS--KTPKELAKVMKQCWKKDPEDRP---TMSTIKK 415 (474)
T ss_pred cccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCC--CCHHHHHHHHHHhccCChhhcc---CHHHHHH
Confidence 99999999999999998 8999999999999999866444444444 678999999999998 999999 6666553
No 300
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-43 Score=309.03 Aligned_cols=265 Identities=25% Similarity=0.392 Sum_probs=212.6
Q ss_pred CCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC---
Q 012988 82 KICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT--- 158 (452)
Q Consensus 82 ~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~--- 158 (452)
.++.++|+|.+.||+|||+.||+++...++..||+|++.... ....+..++|++..+.++|||+++++++...+
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~---~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D 93 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS---QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKD 93 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc---hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhcc
Confidence 456789999999999999999999999999999999987653 45567889999999999999999998876433
Q ss_pred --CeEEEEEeecCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCCCcEEECCCCcEEEeec
Q 012988 159 --EYLYLIMEYLPGGDMMTLLMR----EDTLTENVARFYIAQSVLAIESIHKHN--YIHRDIKPDNLLLDKNGHMKLSDF 230 (452)
Q Consensus 159 --~~~~lV~E~~~ggsL~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~g--ivHrDlkp~NILl~~~g~ikl~DF 230 (452)
...||+++|...|+|.+.+.. +..++|.++..|+.+++.||.+||+.. ++||||||.|||+.+++.++|.||
T Consensus 94 ~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~ 173 (302)
T KOG2345|consen 94 GKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDL 173 (302)
T ss_pred CceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEec
Confidence 359999999999999999854 347999999999999999999999998 999999999999999999999999
Q ss_pred cCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC
Q 012988 231 GLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK 310 (452)
Q Consensus 231 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~ 310 (452)
|.+....-... + .......++|... .-|..|+|||.+.-+
T Consensus 174 GS~~~a~i~i~---------------------~-----------~~~a~~lQe~a~e--------~Ct~pyRAPELf~vk 213 (302)
T KOG2345|consen 174 GSATQAPIQIE---------------------G-----------SRQALRLQEWAEE--------RCTIPYRAPELFNVK 213 (302)
T ss_pred cCccccceEee---------------------c-----------hHHHHHHHHHHHH--------hCCCcccCchheecc
Confidence 99875421100 0 0112233444333 357889999998754
Q ss_pred ---CCCccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCH
Q 012988 311 ---GYGMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGA 386 (452)
Q Consensus 311 ---~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~ 386 (452)
-.+.++|||||||+||.|+.|..||...-...-.-..........+|..+.+|..+.+||+.||+ ||.+|| ++
T Consensus 214 ~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP---~i 290 (302)
T KOG2345|consen 214 SHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRP---TI 290 (302)
T ss_pred cCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCC---CH
Confidence 34789999999999999999999995321110000111123467788888899999999999999 999999 88
Q ss_pred HHHhcC
Q 012988 387 HQIKAH 392 (452)
Q Consensus 387 ~eil~h 392 (452)
.+++.+
T Consensus 291 ~~ll~~ 296 (302)
T KOG2345|consen 291 PELLSK 296 (302)
T ss_pred HHHHHH
Confidence 888754
No 301
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=1.7e-41 Score=330.13 Aligned_cols=254 Identities=25% Similarity=0.380 Sum_probs=211.9
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
..|+..+.||.|+||.||+|.++.++..+|+|.+.............+.+|+.+++.++|+|++++++++......++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 45888899999999999999999999999999986543333344566788999999999999999999999999999999
Q ss_pred eecCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 166 EYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 166 E~~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
||+. |+|.+++.. ...+++..+..++.|++.||.|||+.|++||||||+|||++.++.++|+|||++......
T Consensus 95 e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~----- 168 (308)
T cd06634 95 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA----- 168 (308)
T ss_pred EccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCc-----
Confidence 9996 577777644 456899999999999999999999999999999999999999999999999998754210
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhcc---CCCCCccchhhhh
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLL---KKGYGMECDWWSL 321 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~---~~~~~~~~DiwSl 321 (452)
....|++.|+|||.+. ...++.++|||||
T Consensus 169 ------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~sl 200 (308)
T cd06634 169 ------------------------------------------------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSL 200 (308)
T ss_pred ------------------------------------------------ccccCCccccCHHHHhhcccCCCCcccchHHH
Confidence 1345888999999985 3457889999999
Q ss_pred hHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCC
Q 012988 322 GAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 322 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
||++|+|++|..||...+.......+... .........++..+.+||.+||. +|.+|| ++.+++.|||+...
T Consensus 201 G~il~el~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp---~~~~ll~~~~~~~~ 273 (308)
T cd06634 201 GITCIELAERKPPLFNMNAMSALYHIAQN--ESPALQSGHWSEYFRNFVDSCLQKIPQDRP---TSEVLLKHRFVLRE 273 (308)
T ss_pred HHHHHHHHcCCCCCccccHHHHHHHHhhc--CCCCcCcccccHHHHHHHHHHhhCCcccCC---CHHHHhhCcccccc
Confidence 99999999999999877655554444432 11111223578999999999998 999999 99999999999863
No 302
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.3e-42 Score=354.49 Aligned_cols=257 Identities=26% Similarity=0.424 Sum_probs=220.0
Q ss_pred hhcCCCCCCCeeEeceeccCCCeEEEEEEEcc-----CCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEE
Q 012988 78 LKRHKICVDDFELLTIIGRGAFGEVRLCREKK-----SGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLY 152 (452)
Q Consensus 78 ~~~~~~~~~~y~i~~~LG~G~~g~V~~a~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~ 152 (452)
.+..++...+.+..+.||+|+||+||+|+... +...||||.++... .....++|++|+++|..++|||||+|+
T Consensus 478 ~~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--~~~~~~dF~REaeLla~l~H~nIVrLl 555 (774)
T KOG1026|consen 478 LKVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--ENQARQDFRREAELLAELQHPNIVRLL 555 (774)
T ss_pred cceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--cHHHHHHHHHHHHHHHhccCCCeEEEE
Confidence 34456778889999999999999999998643 35679999997653 333567899999999999999999999
Q ss_pred EEEEcCCeEEEEEeecCCCChHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEE
Q 012988 153 YSFQDTEYLYLIMEYLPGGDMMTLLMRED--------------TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLL 218 (452)
Q Consensus 153 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIL 218 (452)
|++..++.+|||+|||..|||..+|.... +++..+...++.||+.|+.||-++.+|||||...|+|
T Consensus 556 GVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCL 635 (774)
T KOG1026|consen 556 GVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCL 635 (774)
T ss_pred EEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhce
Confidence 99999999999999999999999995421 2778889999999999999999999999999999999
Q ss_pred ECCCCcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccC
Q 012988 219 LDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGT 298 (452)
Q Consensus 219 l~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt 298 (452)
|.++..|||+|||+++....+..+.... ...-.
T Consensus 636 Vge~l~VKIsDfGLsRdiYssDYYk~~~-----------------------------------------------~t~lP 668 (774)
T KOG1026|consen 636 VGENLVVKISDFGLSRDIYSSDYYKVRG-----------------------------------------------NTLLP 668 (774)
T ss_pred eccceEEEecccccchhhhhhhhhcccC-----------------------------------------------Cceee
Confidence 9999999999999999765443322110 11234
Q ss_pred CccccchhccCCCCCccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-C
Q 012988 299 PDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-D 376 (452)
Q Consensus 299 ~~y~APE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-d 376 (452)
..|||||.|..+.|+.++||||+||+|||+++ |..||++..+.+.+..|..+.- +.-| ..++.++.+|+..|++ +
T Consensus 669 IRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~l-L~~P--e~CP~~vY~LM~~CW~~~ 745 (774)
T KOG1026|consen 669 IRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQL-LSCP--ENCPTEVYSLMLECWNEN 745 (774)
T ss_pred eecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCc-ccCC--CCCCHHHHHHHHHHhhcC
Confidence 68999999999999999999999999999997 9999999999999999987433 4444 4899999999999999 9
Q ss_pred ccccCCCCCHHHH
Q 012988 377 VEHRLGTGGAHQI 389 (452)
Q Consensus 377 p~~R~~~~~~~ei 389 (452)
|.+|| ++.||
T Consensus 746 P~~RP---sF~eI 755 (774)
T KOG1026|consen 746 PKRRP---SFKEI 755 (774)
T ss_pred cccCC---CHHHH
Confidence 99999 66665
No 303
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.3e-41 Score=328.90 Aligned_cols=256 Identities=23% Similarity=0.324 Sum_probs=209.2
Q ss_pred CCCCCCCeeEeceeccCCCeEEEEEEEcc-------CCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEE
Q 012988 81 HKICVDDFELLTIIGRGAFGEVRLCREKK-------SGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLY 152 (452)
Q Consensus 81 ~~~~~~~y~i~~~LG~G~~g~V~~a~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~ 152 (452)
+.+..++|.+.+.||+|+||.||+|.+.. ....+|+|++.... .......+..|+.+++.+ +||||++++
T Consensus 7 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~ 84 (314)
T cd05099 7 WEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLL 84 (314)
T ss_pred ccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEE
Confidence 34556789999999999999999998642 34579999886432 223456688899999999 699999999
Q ss_pred EEEEcCCeEEEEEeecCCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCc
Q 012988 153 YSFQDTEYLYLIMEYLPGGDMMTLLMRE----------------DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDN 216 (452)
Q Consensus 153 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~----------------~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~N 216 (452)
+++.+.+.+|+||||+++|+|.+++... ..++...+..++.|++.||.|||++||+||||||+|
T Consensus 85 ~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~N 164 (314)
T cd05099 85 GVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARN 164 (314)
T ss_pred EEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecccccee
Confidence 9999999999999999999999999653 347888899999999999999999999999999999
Q ss_pred EEECCCCcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccc
Q 012988 217 LLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTV 296 (452)
Q Consensus 217 ILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (452)
||++.++.+||+|||+++........ .......
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~-----------------------------------------------~~~~~~~ 197 (314)
T cd05099 165 VLVTEDNVMKIADFGLARGVHDIDYY-----------------------------------------------KKTSNGR 197 (314)
T ss_pred EEEcCCCcEEEccccccccccccccc-----------------------------------------------cccccCC
Confidence 99999999999999999865311100 0001123
Q ss_pred cCCccccchhccCCCCCccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc
Q 012988 297 GTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC 375 (452)
Q Consensus 297 Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~ 375 (452)
++..|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+.+..+... .....+ ..++.++++||.+||.
T Consensus 198 ~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~l~~li~~cl~ 274 (314)
T cd05099 198 LPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREG-HRMDKP--SNCTHELYMLMRECWH 274 (314)
T ss_pred CCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCCCC--CCCCHHHHHHHHHHcC
Confidence 4567999999998899999999999999999999 89999888777777666542 222233 3678899999999998
Q ss_pred -CccccCCCCCHHHHhc
Q 012988 376 -DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 376 -dp~~R~~~~~~~eil~ 391 (452)
||.+|| ++.++++
T Consensus 275 ~~p~~Rp---s~~~ll~ 288 (314)
T cd05099 275 AVPTQRP---TFKQLVE 288 (314)
T ss_pred CCcccCc---CHHHHHH
Confidence 999999 8888874
No 304
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=3.1e-41 Score=319.80 Aligned_cols=249 Identities=23% Similarity=0.378 Sum_probs=206.2
Q ss_pred CCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeE
Q 012988 82 KICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYL 161 (452)
Q Consensus 82 ~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~ 161 (452)
.+..++|++++.||+|+||.||+|... ++..+|+|.+..... ..+.+.+|+.+++.++|+|++++++++. ....
T Consensus 2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~ 75 (260)
T cd05070 2 EIPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM----SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPI 75 (260)
T ss_pred CCchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC----CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCc
Confidence 355678999999999999999999765 567799999875432 2356889999999999999999999885 4568
Q ss_pred EEEEeecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 162 YLIMEYLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
|+||||+++++|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++..+...
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05070 76 YIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDN 155 (260)
T ss_pred EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCc
Confidence 9999999999999998753 45899999999999999999999999999999999999999999999999998765311
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhh
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWW 319 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Diw 319 (452)
.. .......++..|+|||++.+..++.++|||
T Consensus 156 ~~------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 187 (260)
T cd05070 156 EY------------------------------------------------TARQGAKFPIKWTAPEAALYGRFTIKSDVW 187 (260)
T ss_pred cc------------------------------------------------ccccCCCCCccccChHHHhcCCCcchhhhH
Confidence 00 000122356789999999888899999999
Q ss_pred hhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHh
Q 012988 320 SLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIK 390 (452)
Q Consensus 320 SlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil 390 (452)
|||+++|+|++ |.+||.+.+..+....+... ...+.....+..+.+||.+||. +|.+|| ++.++.
T Consensus 188 slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~~l~ 254 (260)
T cd05070 188 SFGILLTELVTKGRVPYPGMNNREVLEQVERG---YRMPCPQDCPISLHELMLQCWKKDPEERP---TFEYLQ 254 (260)
T ss_pred HHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC---CCCCCCCcCCHHHHHHHHHHcccCcccCc---CHHHHH
Confidence 99999999999 99999888777766666532 2233334678999999999999 999999 788776
No 305
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=3e-41 Score=321.72 Aligned_cols=251 Identities=22% Similarity=0.349 Sum_probs=205.2
Q ss_pred eeEeceeccCCCeEEEEEEEccC---CCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCe----
Q 012988 88 FELLTIIGRGAFGEVRLCREKKS---GNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEY---- 160 (452)
Q Consensus 88 y~i~~~LG~G~~g~V~~a~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~---- 160 (452)
|++.+.||+|+||.||+|....+ +..||+|++..... .......+.+|+.+++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH-TYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence 57889999999999999987654 47899999875422 23345678899999999999999999998765443
Q ss_pred --EEEEEeecCCCChHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccC
Q 012988 161 --LYLIMEYLPGGDMMTLLMRE------DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGL 232 (452)
Q Consensus 161 --~~lV~E~~~ggsL~~~l~~~------~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGl 232 (452)
.++||||+++|+|..++... ..+++..+..++.|++.||.|||++||+||||||+||++++++.+||+|||+
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 159 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGL 159 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccc
Confidence 89999999999999988442 3689999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCC
Q 012988 233 CKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGY 312 (452)
Q Consensus 233 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 312 (452)
++........ .......++..|+|||++.+..+
T Consensus 160 ~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~pe~~~~~~~ 192 (273)
T cd05035 160 SKKIYSGDYY-----------------------------------------------RQGRIAKMPVKWIAIESLADRVY 192 (273)
T ss_pred eeeccccccc-----------------------------------------------cccccccCCccccCHhhcccCCC
Confidence 8865321100 00011235678999999988889
Q ss_pred CccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHh
Q 012988 313 GMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIK 390 (452)
Q Consensus 313 ~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil 390 (452)
+.++|||||||++|||++ |..||.+....+....+... .....| ..++.++.++|.+||. ||.+|| ++.+++
T Consensus 193 ~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~li~~~l~~~p~~Rp---~~~e~~ 266 (273)
T cd05035 193 TSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHG-NRLKQP--EDCLDELYDLMYSCWRADPKDRP---TFTKLR 266 (273)
T ss_pred CcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCCCC--cCCCHHHHHHHHHHcCCChhhCc---CHHHHH
Confidence 999999999999999999 99999888777776666542 233333 3688999999999999 999999 888887
Q ss_pred cC
Q 012988 391 AH 392 (452)
Q Consensus 391 ~h 392 (452)
.+
T Consensus 267 ~~ 268 (273)
T cd05035 267 EV 268 (273)
T ss_pred HH
Confidence 53
No 306
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=4e-41 Score=319.06 Aligned_cols=250 Identities=24% Similarity=0.383 Sum_probs=207.3
Q ss_pred CCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeE
Q 012988 82 KICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYL 161 (452)
Q Consensus 82 ~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~ 161 (452)
++..++|+++++||+|+||.||+|... +++.||+|.+..... ....+.+|+.+++.++|+||+++++++. .+.+
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~ 75 (260)
T cd05067 2 EVPRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM----SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPI 75 (260)
T ss_pred ccchHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCC----cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCc
Confidence 455688999999999999999999854 578899999875432 2356888999999999999999999875 4568
Q ss_pred EEEEeecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 162 YLIMEYLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
|+||||+++++|.+++... ..++...+..++.|++.||+|||+.|++||||||+||+++.++.++|+|||++......
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05067 76 YIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDN 155 (260)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCC
Confidence 9999999999999998653 46888999999999999999999999999999999999999999999999998765311
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhh
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWW 319 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Diw 319 (452)
.. .......++..|+|||++....++.++|||
T Consensus 156 ~~------------------------------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~ 187 (260)
T cd05067 156 EY------------------------------------------------TAREGAKFPIKWTAPEAINYGTFTIKSDVW 187 (260)
T ss_pred Cc------------------------------------------------ccccCCcccccccCHHHhccCCcCcccchH
Confidence 00 000123466789999999988899999999
Q ss_pred hhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 320 SLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 320 SlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
|||+++|+|++ |++||.+.+..+....+.. ....+....++.++.+||.+||. +|.+|| ++++++.
T Consensus 188 slG~~l~el~~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~l~~ 255 (260)
T cd05067 188 SFGILLTEIVTYGRIPYPGMTNPEVIQNLER---GYRMPRPDNCPEELYELMRLCWKEKPEERP---TFEYLRS 255 (260)
T ss_pred HHHHHHHHHHhCCCCCCCCCChHHHHHHHHc---CCCCCCCCCCCHHHHHHHHHHccCChhhCC---CHHHHHH
Confidence 99999999999 9999988877666655543 22233334678999999999999 999999 8888764
No 307
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=2.8e-41 Score=332.00 Aligned_cols=261 Identities=28% Similarity=0.421 Sum_probs=208.3
Q ss_pred CeeEeceeccCCCeEEEEEEEccC--CCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEEc----CC
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKS--GNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQD----TE 159 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~----~~ 159 (452)
+|++.+.||+|+||.||+|.+..+ +..||+|++.... ........+.+|+.+++.+ +||||+++++.+.. ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF-SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc-ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 489999999999999999999888 8999999986432 1222345677899999999 59999999987532 24
Q ss_pred eEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 160 YLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
.+|++++|+ +++|..++.....+++..++.++.|++.||.|||+.||+||||||+|||++.++.+||+|||+++.+...
T Consensus 80 ~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~ 158 (332)
T cd07857 80 ELYLYEELM-EADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSEN 158 (332)
T ss_pred cEEEEEecc-cCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccc
Confidence 688999998 4799999988888999999999999999999999999999999999999999999999999999865321
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchh
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDW 318 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~Di 318 (452)
... .........||+.|+|||++.+ ..++.++||
T Consensus 159 ~~~---------------------------------------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di 193 (332)
T cd07857 159 PGE---------------------------------------------NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDV 193 (332)
T ss_pred ccc---------------------------------------------ccccccCcccCccccCcHHHhCCCCCCcHHHH
Confidence 100 0001123578999999998765 568999999
Q ss_pred hhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccC--------------------------cccCCC-CCCCChhHHHHHH
Q 012988 319 WSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRN--------------------------HLKFPD-DSKLSPEAKDLIC 371 (452)
Q Consensus 319 wSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~--------------------------~~~~p~-~~~~s~~~~dLi~ 371 (452)
|||||++|+|++|.+||.+.+....+..+..... ...++. ...++..+.+||.
T Consensus 194 ~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 273 (332)
T cd07857 194 WSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLE 273 (332)
T ss_pred HHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHH
Confidence 9999999999999999987765544443332110 001110 1245789999999
Q ss_pred Hhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 372 RLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 372 ~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
+||+ ||.+|| ++.+++.||||+.
T Consensus 274 ~~l~~~P~~R~---t~~~ll~~~~~~~ 297 (332)
T cd07857 274 KLLAFDPTKRI---SVEEALEHPYLAI 297 (332)
T ss_pred HHccCCcccCC---CHHHHhcChhhhh
Confidence 9999 999999 9999999999973
No 308
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.4e-41 Score=328.32 Aligned_cols=258 Identities=22% Similarity=0.349 Sum_probs=211.6
Q ss_pred cCCCCCCCeeEeceeccCCCeEEEEEEEc-------cCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeE
Q 012988 80 RHKICVDDFELLTIIGRGAFGEVRLCREK-------KSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKL 151 (452)
Q Consensus 80 ~~~~~~~~y~i~~~LG~G~~g~V~~a~~~-------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l 151 (452)
...+..++|.+.+.||+|+||.||+|+.. .++..||+|++.... .......+.+|+.+++.+ +||||+++
T Consensus 9 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~ 86 (304)
T cd05101 9 RWEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINL 86 (304)
T ss_pred cccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchhe
Confidence 34566789999999999999999999753 234579999886432 223456788999999999 89999999
Q ss_pred EEEEEcCCeEEEEEeecCCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCC
Q 012988 152 YYSFQDTEYLYLIMEYLPGGDMMTLLMRE----------------DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPD 215 (452)
Q Consensus 152 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~----------------~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~ 215 (452)
++++...+.+|+||||+++|+|.+++... ..++...+..++.|++.||.|||++||+||||||+
T Consensus 87 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~ 166 (304)
T cd05101 87 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAAR 166 (304)
T ss_pred eEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccc
Confidence 99999999999999999999999999753 24677788899999999999999999999999999
Q ss_pred cEEECCCCcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhcccccccc
Q 012988 216 NLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFST 295 (452)
Q Consensus 216 NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (452)
|||++.++.+||+|||+++....... .......
T Consensus 167 Nili~~~~~~kl~D~g~~~~~~~~~~-----------------------------------------------~~~~~~~ 199 (304)
T cd05101 167 NVLVTENNVMKIADFGLARDVNNIDY-----------------------------------------------YKKTTNG 199 (304)
T ss_pred eEEEcCCCcEEECCCccceecccccc-----------------------------------------------cccccCC
Confidence 99999999999999999986532110 0001123
Q ss_pred ccCCccccchhccCCCCCccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhh
Q 012988 296 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLL 374 (452)
Q Consensus 296 ~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL 374 (452)
.+++.|+|||++.+..++.++||||||+++|+|++ |..||.+.+..+....+... .....+ ..++.++++||.+||
T Consensus 200 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~li~~cl 276 (304)
T cd05101 200 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG-HRMDKP--ANCTNELYMMMRDCW 276 (304)
T ss_pred CCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC-CcCCCC--CCCCHHHHHHHHHHc
Confidence 46778999999998889999999999999999998 88999888777776666432 222223 368899999999999
Q ss_pred c-CccccCCCCCHHHHhcC
Q 012988 375 C-DVEHRLGTGGAHQIKAH 392 (452)
Q Consensus 375 ~-dp~~R~~~~~~~eil~h 392 (452)
. +|.+|| ++.++++.
T Consensus 277 ~~~p~~Rp---s~~e~l~~ 292 (304)
T cd05101 277 HAIPSHRP---TFKQLVED 292 (304)
T ss_pred ccChhhCC---CHHHHHHH
Confidence 8 999999 88888763
No 309
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=3.7e-41 Score=318.34 Aligned_cols=246 Identities=24% Similarity=0.362 Sum_probs=210.7
Q ss_pred ceeccCCCeEEEEEEEccC---CCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeec
Q 012988 92 TIIGRGAFGEVRLCREKKS---GNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYL 168 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~ 168 (452)
+.||+|+||.||+|.+... +..||+|++....... ....+.+|+.+++.++|+||+++++++.+...+++||||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE--ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh--HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence 4699999999999999866 8999999987653322 4677889999999999999999999999999999999999
Q ss_pred CCCChHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 169 PGGDMMTLLMRE---------DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 169 ~ggsL~~~l~~~---------~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
++++|.+++... ..+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||.+......
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 158 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDD 158 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccc
Confidence 999999999875 78999999999999999999999999999999999999999999999999999865421
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhh
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWW 319 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Diw 319 (452)
.. ........+++.|+|||.+....++.++|||
T Consensus 159 ~~-----------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 191 (262)
T cd00192 159 DY-----------------------------------------------YRKKTGGKLPIRWMAPESLKDGIFTSKSDVW 191 (262)
T ss_pred cc-----------------------------------------------cccccCCCcCccccCHHHhccCCcchhhccH
Confidence 10 0011234578899999999888899999999
Q ss_pred hhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcC
Q 012988 320 SLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAH 392 (452)
Q Consensus 320 SlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~h 392 (452)
|||+++|+|++ |..||...+.......+.. ......| ..++.++.++|.+||+ +|.+|| ++.++++|
T Consensus 192 slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rp---s~~~l~~~ 260 (262)
T cd00192 192 SFGVLLWEIFTLGATPYPGLSNEEVLEYLRK-GYRLPKP--EYCPDELYELMLSCWQLDPEDRP---TFSELVER 260 (262)
T ss_pred HHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-CCCCCCC--ccCChHHHHHHHHHccCCcccCc---CHHHHHHh
Confidence 99999999999 6999998887777776664 2223333 3678999999999999 999999 99999865
No 310
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=3.5e-41 Score=320.77 Aligned_cols=253 Identities=22% Similarity=0.323 Sum_probs=209.5
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCC---EEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGN---IYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYL 161 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~---~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~ 161 (452)
..+|++.+.||+|+||.||+|.++.++. .+|+|.++... .......+.+|+.+++.++||||+++++++.+.+.+
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPV 80 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence 4689999999999999999999875543 79999886542 122356788899999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCc
Q 012988 162 YLIMEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCST 240 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~ 240 (452)
|+||||+++++|.+++... ..++...+..++.|++.||.|||+.||+||||||+|||++.++.++|+|||+++.+....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 160 (267)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence 9999999999999999764 568999999999999999999999999999999999999999999999999988653211
Q ss_pred chhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhh
Q 012988 241 LYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWS 320 (452)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwS 320 (452)
.. ........++..|+|||.+.+..++.++|+||
T Consensus 161 ~~----------------------------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~s 194 (267)
T cd05066 161 EA----------------------------------------------AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWS 194 (267)
T ss_pred ce----------------------------------------------eeecCCCccceeecCHhHhccCccCchhhhHH
Confidence 00 00001123456899999999888999999999
Q ss_pred hhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 321 LGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 321 lGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
|||++|++++ |..||...+..+....+... ...|....+++.+.+++.+||+ +|.+|| ++.++++
T Consensus 195 lG~~l~ell~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~i~~ 261 (267)
T cd05066 195 YGIVMWEVMSYGERPYWEMSNQDVIKAIEEG---YRLPAPMDCPAALHQLMLDCWQKDRNERP---KFEQIVS 261 (267)
T ss_pred HHHHHHHHhcCCCCCcccCCHHHHHHHHhCC---CcCCCCCCCCHHHHHHHHHHcccCchhCC---CHHHHHH
Confidence 9999999886 99999888777666666542 2334444678999999999999 999999 7887764
No 311
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=3.4e-41 Score=325.16 Aligned_cols=252 Identities=24% Similarity=0.381 Sum_probs=207.5
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEc-----cCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREK-----KSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT 158 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~ 158 (452)
...+|.+.+.||+|+||.||+|... .++..+++|.+..... .....+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (291)
T cd05094 3 KRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL---AARKDFQREAELLTNLQHEHIVKFYGVCGDG 79 (291)
T ss_pred chHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH---HHHHHHHHHHHHHhcCCCCCcceEEEEEccC
Confidence 3467999999999999999999854 3456789998764422 2235688899999999999999999999999
Q ss_pred CeEEEEEeecCCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCC
Q 012988 159 EYLYLIMEYLPGGDMMTLLMRED----------------TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKN 222 (452)
Q Consensus 159 ~~~~lV~E~~~ggsL~~~l~~~~----------------~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~ 222 (452)
...++||||+++++|.+++.... .+++..+..++.|++.||.|||++||+||||||+|||++.+
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~ 159 (291)
T cd05094 80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN 159 (291)
T ss_pred CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC
Confidence 99999999999999999996542 37889999999999999999999999999999999999999
Q ss_pred CcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccc
Q 012988 223 GHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYI 302 (452)
Q Consensus 223 g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~ 302 (452)
+.++|+|||++........ ........|++.|+
T Consensus 160 ~~~~l~dfg~a~~~~~~~~-----------------------------------------------~~~~~~~~~~~~y~ 192 (291)
T cd05094 160 LLVKIGDFGMSRDVYSTDY-----------------------------------------------YRVGGHTMLPIRWM 192 (291)
T ss_pred CcEEECCCCcccccCCCce-----------------------------------------------eecCCCCCcceeec
Confidence 9999999999875431110 00112345788999
Q ss_pred cchhccCCCCCccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-Ccccc
Q 012988 303 APEVLLKKGYGMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHR 380 (452)
Q Consensus 303 APE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R 380 (452)
|||++.+..++.++|||||||++|+|++ |..||...+.......+.... .... ...++..+.+||.+||. ||.+|
T Consensus 193 aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~li~~~l~~~P~~R 269 (291)
T cd05094 193 PPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGR-VLER--PRVCPKEVYDIMLGCWQREPQQR 269 (291)
T ss_pred ChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCCC-CCCC--CccCCHHHHHHHHHHcccChhhC
Confidence 9999999999999999999999999998 999998887776666554321 1122 23578899999999999 99999
Q ss_pred CCCCCHHHHhc
Q 012988 381 LGTGGAHQIKA 391 (452)
Q Consensus 381 ~~~~~~~eil~ 391 (452)
| ++.++++
T Consensus 270 p---t~~~v~~ 277 (291)
T cd05094 270 L---NIKEIYK 277 (291)
T ss_pred c---CHHHHHH
Confidence 9 8888764
No 312
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=3.1e-41 Score=322.32 Aligned_cols=254 Identities=22% Similarity=0.382 Sum_probs=211.5
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEcc-----CCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKK-----SGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT 158 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~ 158 (452)
..++|++++.||+|+||+||+|+.+. +...||+|.+.... .......+.+|+.+++.++|+||+++++++.+.
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 80 (275)
T cd05046 3 PRSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKLSHKNVVRLLGLCREA 80 (275)
T ss_pred ChHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhcCCcceeeeEEEECCC
Confidence 34689999999999999999999754 34679999875432 122456788999999999999999999999999
Q ss_pred CeEEEEEeecCCCChHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEee
Q 012988 159 EYLYLIMEYLPGGDMMTLLMRED---------TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSD 229 (452)
Q Consensus 159 ~~~~lV~E~~~ggsL~~~l~~~~---------~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~D 229 (452)
+..|+||||+++|+|.+++.... .+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|
T Consensus 81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~ 160 (275)
T cd05046 81 EPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSL 160 (275)
T ss_pred CcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcc
Confidence 99999999999999999997655 689999999999999999999999999999999999999999999999
Q ss_pred ccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC
Q 012988 230 FGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK 309 (452)
Q Consensus 230 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~ 309 (452)
||+++....... .......++..|+|||.+.+
T Consensus 161 ~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~y~~PE~~~~ 192 (275)
T cd05046 161 LSLSKDVYNSEY------------------------------------------------YKLRNALIPLRWLAPEAVQE 192 (275)
T ss_pred cccccccCcccc------------------------------------------------cccCCceeEEeecChhhhcc
Confidence 999874321100 00112356778999999988
Q ss_pred CCCCccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHH
Q 012988 310 KGYGMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAH 387 (452)
Q Consensus 310 ~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~ 387 (452)
..++.++||||||+++|+|++ |..||...........+... ...++....++..+.++|.+||. +|.+|| ++.
T Consensus 193 ~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp---~~~ 267 (275)
T cd05046 193 DDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAG--KLELPVPEGCPSRLYKLMTRCWAVNPKDRP---SFS 267 (275)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcC--CcCCCCCCCCCHHHHHHHHHHcCCCcccCC---CHH
Confidence 888999999999999999998 88999877776666666542 33333344688999999999999 999999 899
Q ss_pred HHhcC
Q 012988 388 QIKAH 392 (452)
Q Consensus 388 eil~h 392 (452)
+++.+
T Consensus 268 ~~l~~ 272 (275)
T cd05046 268 ELVSA 272 (275)
T ss_pred HHHHH
Confidence 98864
No 313
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.7e-41 Score=335.12 Aligned_cols=258 Identities=22% Similarity=0.338 Sum_probs=204.5
Q ss_pred CCCCCCCeeEeceeccCCCeEEEEEEE-----ccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEE
Q 012988 81 HKICVDDFELLTIIGRGAFGEVRLCRE-----KKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYS 154 (452)
Q Consensus 81 ~~~~~~~y~i~~~LG~G~~g~V~~a~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~ 154 (452)
+.+..++|++++.||+|+||+||+|.+ ..+++.||||+++... .......+.+|+.++..+ +||||++++++
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~ 79 (343)
T cd05103 2 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGA 79 (343)
T ss_pred cccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC--ChHHHHHHHHHHHHHHhccCCccHhhhcce
Confidence 345568899999999999999999985 3467899999986542 223345688899999999 68999999998
Q ss_pred EEc-CCeEEEEEeecCCCChHHHHHhc-----------------------------------------------------
Q 012988 155 FQD-TEYLYLIMEYLPGGDMMTLLMRE----------------------------------------------------- 180 (452)
Q Consensus 155 ~~~-~~~~~lV~E~~~ggsL~~~l~~~----------------------------------------------------- 180 (452)
+.. ...+++||||+++|+|.+++...
T Consensus 80 ~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (343)
T cd05103 80 CTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLS 159 (343)
T ss_pred eecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccc
Confidence 765 45689999999999999998642
Q ss_pred --------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcc
Q 012988 181 --------------DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHE 246 (452)
Q Consensus 181 --------------~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~ 246 (452)
..++...+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~---- 235 (343)
T cd05103 160 DVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY---- 235 (343)
T ss_pred cchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcch----
Confidence 13567778889999999999999999999999999999999999999999998764211000
Q ss_pred ccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHH
Q 012988 247 HKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 326 (452)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ 326 (452)
.......+++.|+|||++.+..++.++||||||+++|
T Consensus 236 -------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 272 (343)
T cd05103 236 -------------------------------------------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 272 (343)
T ss_pred -------------------------------------------hhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHH
Confidence 0011224567899999999989999999999999999
Q ss_pred Hhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcC
Q 012988 327 EMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAH 392 (452)
Q Consensus 327 ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~h 392 (452)
+|++ |..||.....................| ..+++++.+++.+||+ ||.+|| ++.+|++|
T Consensus 273 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~cl~~~p~~Rp---s~~eil~~ 335 (343)
T cd05103 273 EIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP--DYTTPEMYQTMLDCWHGEPSQRP---TFSELVEH 335 (343)
T ss_pred HHHHCCCCCCCCccccHHHHHHHhccCCCCCC--CCCCHHHHHHHHHHccCChhhCc---CHHHHHHH
Confidence 9997 999997755433333333322233333 3578899999999999 999999 99999876
No 314
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=4.2e-41 Score=317.44 Aligned_cols=251 Identities=29% Similarity=0.486 Sum_probs=216.0
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
+|++.+.||.|+||.||++.++.+++.||+|++...... ......+.+|+.+++.++|+||+++++++.+....|+|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMS-QKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhcc-HHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 589999999999999999999999999999998765432 2334567789999999999999999999999999999999
Q ss_pred ecCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcch
Q 012988 167 YLPGGDMMTLLMR----EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLY 242 (452)
Q Consensus 167 ~~~ggsL~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~ 242 (452)
|+++++|..++.. ...+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.+||+|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~--- 156 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN--- 156 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC---
Confidence 9999999999866 356899999999999999999999999999999999999999999999999998765311
Q ss_pred hhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhh
Q 012988 243 AIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLG 322 (452)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlG 322 (452)
......|++.|+|||.+.+..++.++|+||||
T Consensus 157 ------------------------------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG 188 (256)
T cd08530 157 ------------------------------------------------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLG 188 (256)
T ss_pred ------------------------------------------------CcccccCCccccCHHHHCCCCCCchhhHHHHH
Confidence 01123578899999999998899999999999
Q ss_pred HHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 323 AIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 323 vil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
+++|+|++|+.||...+.......+... .....+ ..++.+++++|.+||. +|.+|| ++.++++||++
T Consensus 189 ~~~~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~li~~~l~~~p~~Rp---~~~~~l~~p~~ 256 (256)
T cd08530 189 CLLYEMATFAPPFEARSMQDLRYKVQRG-KYPPIP--PIYSQDLQNFIRSMLQVKPKLRP---NCDKILASPAV 256 (256)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHhcC-CCCCCc--hhhCHHHHHHHHHHcCCCcccCC---CHHHHhcCCCC
Confidence 9999999999999988876665555432 111222 2678999999999998 999999 99999999984
No 315
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=2.3e-41 Score=339.49 Aligned_cols=259 Identities=22% Similarity=0.308 Sum_probs=209.9
Q ss_pred cCCCCCCCeeEeceeccCCCeEEEEEEEc-----cCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhC-CCceeeEEE
Q 012988 80 RHKICVDDFELLTIIGRGAFGEVRLCREK-----KSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVA-SHCIVKLYY 153 (452)
Q Consensus 80 ~~~~~~~~y~i~~~LG~G~~g~V~~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~ 153 (452)
.+.+..++|.+.+.||+|+||.||+|.+. .++..||+|+++... .....+.+.+|+.+|..+. ||||+++++
T Consensus 31 ~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~E~~~l~~l~~H~niv~~~~ 108 (401)
T cd05107 31 AWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA--RSSEKQALMSELKIMSHLGPHLNIVNLLG 108 (401)
T ss_pred cceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC--ChhHHHHHHHHHHHHHhcCCCCCeEEEEE
Confidence 45667788999999999999999999864 345689999997542 2223456889999999997 999999999
Q ss_pred EEEcCCeEEEEEeecCCCChHHHHHhcC----------------------------------------------------
Q 012988 154 SFQDTEYLYLIMEYLPGGDMMTLLMRED---------------------------------------------------- 181 (452)
Q Consensus 154 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~---------------------------------------------------- 181 (452)
++...+.+|+||||+++|+|.+++...+
T Consensus 109 ~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (401)
T cd05107 109 ACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESAD 188 (401)
T ss_pred EEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccC
Confidence 9999999999999999999999986532
Q ss_pred ----------------------------------------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCC
Q 012988 182 ----------------------------------------------TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPD 215 (452)
Q Consensus 182 ----------------------------------------------~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~ 215 (452)
.++...+..++.|++.||.|||+.||+||||||+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~ 268 (401)
T cd05107 189 YVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAAR 268 (401)
T ss_pred ccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcc
Confidence 2456677889999999999999999999999999
Q ss_pred cEEECCCCcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhcccccccc
Q 012988 216 NLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFST 295 (452)
Q Consensus 216 NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (452)
|||++.++.+||+|||+++.+..... .......
T Consensus 269 NiLl~~~~~~kL~DfGla~~~~~~~~-----------------------------------------------~~~~~~~ 301 (401)
T cd05107 269 NVLICEGKLVKICDFGLARDIMRDSN-----------------------------------------------YISKGST 301 (401)
T ss_pred eEEEeCCCEEEEEecCcceecccccc-----------------------------------------------cccCCCc
Confidence 99999999999999999875421100 0001134
Q ss_pred ccCCccccchhccCCCCCccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhh
Q 012988 296 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLL 374 (452)
Q Consensus 296 ~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL 374 (452)
.|++.|+|||.+.+..++.++|||||||++|||++ |..||......+...........+..| ..++.++.+||.+|+
T Consensus 302 ~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~l~~li~~cl 379 (401)
T cd05107 302 FLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKP--AHASDEIYEIMQKCW 379 (401)
T ss_pred CCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCC--CCCCHHHHHHHHHHc
Confidence 57889999999998889999999999999999998 899998766555544444322223333 367899999999999
Q ss_pred c-CccccCCCCCHHHHhcC
Q 012988 375 C-DVEHRLGTGGAHQIKAH 392 (452)
Q Consensus 375 ~-dp~~R~~~~~~~eil~h 392 (452)
. +|.+|| ++.+|+..
T Consensus 380 ~~~P~~RP---s~~ell~~ 395 (401)
T cd05107 380 EEKFEIRP---DFSQLVHL 395 (401)
T ss_pred CCChhHCc---CHHHHHHH
Confidence 9 999999 89988753
No 316
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=7.6e-41 Score=317.07 Aligned_cols=250 Identities=23% Similarity=0.356 Sum_probs=210.3
Q ss_pred CCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeE
Q 012988 82 KICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYL 161 (452)
Q Consensus 82 ~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~ 161 (452)
++..++|++.+.||.|+||.||+|... .+..||||.+..... ....+.+|+.+++.++|+||+++++++.+....
T Consensus 2 ~~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 76 (261)
T cd05034 2 EIPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM----SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPI 76 (261)
T ss_pred ccchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc----CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCce
Confidence 356789999999999999999999875 457899999875432 235688899999999999999999999998999
Q ss_pred EEEEeecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 162 YLIMEYLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
++||||+++++|.+++... ..++...+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++..+...
T Consensus 77 ~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (261)
T cd05034 77 YIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDD 156 (261)
T ss_pred EEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccch
Confidence 9999999999999999764 36899999999999999999999999999999999999999999999999998765321
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhh
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWW 319 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Diw 319 (452)
... ......++..|+|||.+.+..++.++|+|
T Consensus 157 ~~~------------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~ 188 (261)
T cd05034 157 EYT------------------------------------------------AREGAKFPIKWTAPEAANYGRFTIKSDVW 188 (261)
T ss_pred hhh------------------------------------------------hhhccCCCccccCHHHhccCCcCchhHHH
Confidence 000 00012345689999999988899999999
Q ss_pred hhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHh
Q 012988 320 SLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIK 390 (452)
Q Consensus 320 SlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil 390 (452)
|||+++|+|++ |+.||.+.+.......+... ...+.....+.++.++|.+||. +|.+|| ++.+++
T Consensus 189 slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp---~~~~l~ 255 (261)
T cd05034 189 SFGILLTEIVTYGRVPYPGMTNREVLEQVERG---YRMPRPPNCPEELYDLMLQCWDKDPEERP---TFEYLQ 255 (261)
T ss_pred HHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC---CCCCCCCCCCHHHHHHHHHHcccCcccCC---CHHHHH
Confidence 99999999998 99999888877777766542 2233334568999999999999 999999 888776
No 317
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=3.7e-41 Score=321.16 Aligned_cols=251 Identities=21% Similarity=0.326 Sum_probs=203.3
Q ss_pred eeEeceeccCCCeEEEEEEEccCCC--EEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC------C
Q 012988 88 FELLTIIGRGAFGEVRLCREKKSGN--IYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT------E 159 (452)
Q Consensus 88 y~i~~~LG~G~~g~V~~a~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~------~ 159 (452)
|.+.+.||+|+||.||+|+...++. .+|+|.++... ......+.+.+|+.+++.++||||+++++++... .
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI-CTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence 3567899999999999999887775 68999886542 2334456788899999999999999999876432 2
Q ss_pred eEEEEEeecCCCChHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCC
Q 012988 160 YLYLIMEYLPGGDMMTLLMR------EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLC 233 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~------~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla 233 (452)
..++||||+++|+|..++.. ...+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 159 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLS 159 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcc
Confidence 57899999999999988742 234789999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCC
Q 012988 234 KPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYG 313 (452)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 313 (452)
+........ .......+++.|+|||++.+..++
T Consensus 160 ~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~pe~~~~~~~~ 192 (272)
T cd05075 160 KKIYNGDYY-----------------------------------------------RQGRIAKMPVKWIAIESLADRVYT 192 (272)
T ss_pred cccCcccce-----------------------------------------------ecCCcccCCcccCCHHHccCCCcC
Confidence 865321100 000122467789999999999999
Q ss_pred ccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 314 MECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 314 ~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
.++|||||||++|+|++ |..||.+.........+... ..... ...++..+.++|.+||+ ||.+|| ++.+|++
T Consensus 193 ~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp---s~~~l~~ 266 (272)
T cd05075 193 TKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQG-NRLKQ--PPDCLDGLYSLMSSCWLLNPKDRP---SFETLRC 266 (272)
T ss_pred hHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-CCCCC--CCCCCHHHHHHHHHHcCCCcccCc---CHHHHHH
Confidence 99999999999999999 89999887777666666543 22222 34688999999999999 999999 8988875
Q ss_pred C
Q 012988 392 H 392 (452)
Q Consensus 392 h 392 (452)
+
T Consensus 267 ~ 267 (272)
T cd05075 267 E 267 (272)
T ss_pred H
Confidence 3
No 318
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=5.1e-41 Score=329.61 Aligned_cols=256 Identities=30% Similarity=0.489 Sum_probs=209.3
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEc-CCeEE
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQD-TEYLY 162 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~-~~~~~ 162 (452)
..++|++++.||.|+||.||+|.+..++..||+|++.+... .......+..|+.+++.++||||++++++|.. ...+|
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 86 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS-TPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY 86 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc-ccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence 45789999999999999999999999999999998865422 22344667889999999999999999999876 56789
Q ss_pred EEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcch
Q 012988 163 LIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLY 242 (452)
Q Consensus 163 lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~ 242 (452)
+||||+ +++|..++. ...+++..+..++.|++.||.|||+.||+||||+|.|||++.++.++|+|||++......
T Consensus 87 lv~e~~-~~~L~~~~~-~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~--- 161 (328)
T cd07856 87 FVTELL-GTDLHRLLT-SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQ--- 161 (328)
T ss_pred EEeehh-ccCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCC---
Confidence 999999 678988775 456889999999999999999999999999999999999999999999999998753210
Q ss_pred hhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchhhhh
Q 012988 243 AIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDWWSL 321 (452)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~DiwSl 321 (452)
.....|++.|+|||++.+ ..++.++|||||
T Consensus 162 -------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~sl 192 (328)
T cd07856 162 -------------------------------------------------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSA 192 (328)
T ss_pred -------------------------------------------------cCCCcccccccCceeeeccCCcCcHHHHHHH
Confidence 113457889999999866 568999999999
Q ss_pred hHHHHHhhhCCCCCCCCChHHHHHHHhhccC------------------------cccCCC---CCCCChhHHHHHHHhh
Q 012988 322 GAIMYEMLVGYPPFYADDPITTCRKIVHWRN------------------------HLKFPD---DSKLSPEAKDLICRLL 374 (452)
Q Consensus 322 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~------------------------~~~~p~---~~~~s~~~~dLi~~mL 374 (452)
||++|+|++|..||.+.+.......+..... ....|. ...+++.+.++|.+||
T Consensus 193 G~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 272 (328)
T cd07856 193 GCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKML 272 (328)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHc
Confidence 9999999999999987765433322221100 001111 1246789999999999
Q ss_pred c-CccccCCCCCHHHHhcCCCcCC
Q 012988 375 C-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 375 ~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
+ +|.+|| ++.+++.||||..
T Consensus 273 ~~~P~~R~---t~~ell~~~~~~~ 293 (328)
T cd07856 273 VFDPQKRI---SAAEALAHPYLAP 293 (328)
T ss_pred CCChhhCC---CHHHHhcCCcccc
Confidence 9 999999 9999999999963
No 319
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=6.1e-41 Score=319.12 Aligned_cols=255 Identities=22% Similarity=0.319 Sum_probs=210.8
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEccCCC---EEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREKKSGN---IYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE 159 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~---~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~ 159 (452)
+..++|+..+.||+|+||.||+|..+.++. .+|+|.+.... .....+.+..|+.+++.++||||+++++++.+.+
T Consensus 2 i~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 79 (268)
T cd05063 2 IHPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFK 79 (268)
T ss_pred CChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCC
Confidence 445789999999999999999999876655 79999886542 1223456888999999999999999999999999
Q ss_pred eEEEEEeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCC
Q 012988 160 YLYLIMEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDC 238 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~ 238 (452)
..|+||||+++++|.+++... +.+++..+..++.|++.||.|||+.||+||||||+|||++.++.+||+|||++.....
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 80 PAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred CcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 999999999999999999764 5789999999999999999999999999999999999999999999999999875531
Q ss_pred CcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchh
Q 012988 239 STLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDW 318 (452)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Di 318 (452)
.... ........+++.|+|||++.+..++.++||
T Consensus 160 ~~~~----------------------------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv 193 (268)
T cd05063 160 DPEG----------------------------------------------TYTTSGGKIPIRWTAPEAIAYRKFTSASDV 193 (268)
T ss_pred cccc----------------------------------------------ceeccCCCcCceecCHHHhhcCCcChHhHH
Confidence 1000 000001223567999999998889999999
Q ss_pred hhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 319 WSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 319 wSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
|||||++|+|++ |..||...+.......+... ...|....++.++.+||.+|+. +|.+|| ++.+|++
T Consensus 194 ~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~~li~~c~~~~p~~Rp---~~~~i~~ 262 (268)
T cd05063 194 WSFGIVMWEVMSFGERPYWDMSNHEVMKAINDG---FRLPAPMDCPSAVYQLMLQCWQQDRARRP---RFVDIVN 262 (268)
T ss_pred HHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcC---CCCCCCCCCCHHHHHHHHHHcCCCcccCc---CHHHHHH
Confidence 999999999997 99999888777766666542 2334444678999999999999 999999 8888764
No 320
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-43 Score=325.46 Aligned_cols=257 Identities=25% Similarity=0.436 Sum_probs=208.8
Q ss_pred CCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCC--C----ceeeEEEE
Q 012988 81 HKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVAS--H----CIVKLYYS 154 (452)
Q Consensus 81 ~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h--p----~iv~l~~~ 154 (452)
+-+..++|.+++.||+|+||+|-.+++..++..||||+++.-. ...+..+-|+++|+.+.+ | -+|.+.++
T Consensus 84 gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~----kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~w 159 (415)
T KOG0671|consen 84 GDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD----KYREAALIEIEVLQKINESDPNGKFRCVQMRDW 159 (415)
T ss_pred ccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH----HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehh
Confidence 3445788999999999999999999999999999999986421 233456679999999943 3 37888899
Q ss_pred EEcCCeEEEEEeecCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECC-----------
Q 012988 155 FQDTEYLYLIMEYLPGGDMMTLLMRED--TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDK----------- 221 (452)
Q Consensus 155 ~~~~~~~~lV~E~~~ggsL~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~----------- 221 (452)
|...++.|||+|.+ |.|+.+++..++ +++...++.+++|++.+++|||+.+++|.||||||||+-+
T Consensus 160 FdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~ 238 (415)
T KOG0671|consen 160 FDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKK 238 (415)
T ss_pred hhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCC
Confidence 99999999999999 889999997754 7899999999999999999999999999999999999842
Q ss_pred ---------CCcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccc
Q 012988 222 ---------NGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLA 292 (452)
Q Consensus 222 ---------~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (452)
+-.|+|+|||.|..-... .
T Consensus 239 ~~~~~r~~ks~~I~vIDFGsAtf~~e~----------------------------------------------------h 266 (415)
T KOG0671|consen 239 KVCFIRPLKSTAIKVIDFGSATFDHEH----------------------------------------------------H 266 (415)
T ss_pred ccceeccCCCcceEEEecCCcceeccC----------------------------------------------------c
Confidence 335899999988754211 1
Q ss_pred cccccCCccccchhccCCCCCccchhhhhhHHHHHhhhCCCCCCCCChHHHH---HHHhh----------------ccCc
Q 012988 293 FSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYADDPITTC---RKIVH----------------WRNH 353 (452)
Q Consensus 293 ~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~---~~i~~----------------~~~~ 353 (452)
.+.+.|..|+|||++.+-+++..+||||+||||+||.+|...|...++.+.+ ..|+. ..+.
T Consensus 267 s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~r 346 (415)
T KOG0671|consen 267 STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGR 346 (415)
T ss_pred ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhccc
Confidence 3678999999999999999999999999999999999999999988766633 23321 0011
Q ss_pred ccCCCC-----------------------CCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 354 LKFPDD-----------------------SKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 354 ~~~p~~-----------------------~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
+.+|.. ..--.++.|||++||. ||.+|+ |+.|+|.||||..
T Consensus 347 ldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~Ri---Tl~EAL~HpFF~~ 411 (415)
T KOG0671|consen 347 LDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRI---TLREALSHPFFAR 411 (415)
T ss_pred ccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccc---cHHHHhcCHHhhc
Confidence 111110 0012347799999999 999999 9999999999975
No 321
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=2.5e-41 Score=333.00 Aligned_cols=265 Identities=30% Similarity=0.471 Sum_probs=211.9
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEEcC--Ce
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQDT--EY 160 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~--~~ 160 (452)
..++|++.+.||+|+||.||+|.+..+|..+|+|++.+... .......+.+|+.+++.+ +||||+++++++... ..
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~ 83 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR-NATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKD 83 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccC-cchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCce
Confidence 34789999999999999999999998999999998864321 222345577899999999 999999999998653 46
Q ss_pred EEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCc
Q 012988 161 LYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCST 240 (452)
Q Consensus 161 ~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~ 240 (452)
+|+||||++ ++|..++... .+++..+..++.|++.||.|||+.||+||||||+|||++.+|.+||+|||++..+....
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~ 161 (337)
T cd07852 84 IYLVFEYME-TDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELE 161 (337)
T ss_pred EEEEecccc-cCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccccc
Confidence 899999996 5999888665 78899999999999999999999999999999999999999999999999988653211
Q ss_pred chhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchhh
Q 012988 241 LYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDWW 319 (452)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~Diw 319 (452)
... .........||+.|+|||++.+ ..++.++|||
T Consensus 162 ~~~--------------------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~ 197 (337)
T cd07852 162 ENP--------------------------------------------ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMW 197 (337)
T ss_pred ccc--------------------------------------------cCcchhcccccccccCceeeeccccccccchHH
Confidence 000 0001123568999999998865 5578999999
Q ss_pred hhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcc-----------------------c---C-CCCCCCChhHHHHHHH
Q 012988 320 SLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHL-----------------------K---F-PDDSKLSPEAKDLICR 372 (452)
Q Consensus 320 SlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~-----------------------~---~-p~~~~~s~~~~dLi~~ 372 (452)
|||+++|+|++|+.||.+.........+....... . . .....++.++.+||.+
T Consensus 198 slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 277 (337)
T cd07852 198 SVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKK 277 (337)
T ss_pred HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHH
Confidence 99999999999999998776655544443221100 0 0 0012368899999999
Q ss_pred hhc-CccccCCCCCHHHHhcCCCcCCC
Q 012988 373 LLC-DVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 373 mL~-dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
||+ ||.+|| ++.+++.||||+.+
T Consensus 278 ~l~~~P~~Rp---s~~~il~~~~~~~~ 301 (337)
T cd07852 278 LLVFNPNKRL---TAEEALEHPYVAQF 301 (337)
T ss_pred hccCCccccc---CHHHHhhChhhhhh
Confidence 999 999999 99999999999875
No 322
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=7.8e-41 Score=316.48 Aligned_cols=245 Identities=21% Similarity=0.336 Sum_probs=201.9
Q ss_pred ceeccCCCeEEEEEEEccCC---CEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeec
Q 012988 92 TIIGRGAFGEVRLCREKKSG---NIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYL 168 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~ 168 (452)
++||+|+||.||+|....++ ..||+|.+...... .....+.+|+.+++.++||||+++++++.. ..+++||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeC
Confidence 47999999999999876554 78999998765432 344668889999999999999999998764 4689999999
Q ss_pred CCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcccc
Q 012988 169 PGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHK 248 (452)
Q Consensus 169 ~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~ 248 (452)
++|+|.+++.....+++..+..++.|++.||.|||..||+||||||+|||++.++.+||+|||+++.+.......
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~----- 152 (257)
T cd05060 78 PLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY----- 152 (257)
T ss_pred CCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCccc-----
Confidence 999999999888889999999999999999999999999999999999999999999999999988653211000
Q ss_pred ccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHh
Q 012988 249 TIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 328 (452)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~el 328 (452)
.......++..|+|||.+.+..++.++|||||||++|+|
T Consensus 153 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~ 191 (257)
T cd05060 153 -----------------------------------------RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEA 191 (257)
T ss_pred -----------------------------------------ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHH
Confidence 000112245689999999988999999999999999999
Q ss_pred hh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 329 LV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 329 lt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
++ |..||...+..+....+... .. .+....++..++++|.+||. +|.+|| ++.++++
T Consensus 192 ~~~g~~p~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~l~~li~~cl~~~p~~Rp---~~~~l~~ 250 (257)
T cd05060 192 FSYGAKPYGEMKGAEVIAMLESG-ER--LPRPEECPQEIYSIMLSCWKYRPEDRP---TFSELES 250 (257)
T ss_pred HcCCCCCcccCCHHHHHHHHHcC-Cc--CCCCCCCCHHHHHHHHHHhcCChhhCc---CHHHHHH
Confidence 98 99999887776665555442 22 23334688999999999999 999999 7887764
No 323
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=3.9e-41 Score=325.37 Aligned_cols=256 Identities=19% Similarity=0.342 Sum_probs=204.7
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCC--------------CEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCcee
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSG--------------NIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIV 149 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~--------------~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv 149 (452)
..++|++.+.||+|+||.||+|++..++ ..||+|++.... .......+.+|+++++.++||||+
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~ 80 (295)
T cd05097 3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLKNPNII 80 (295)
T ss_pred chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCcC
Confidence 3468999999999999999999875432 358999986532 223345688999999999999999
Q ss_pred eEEEEEEcCCeEEEEEeecCCCChHHHHHhcC------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcE
Q 012988 150 KLYYSFQDTEYLYLIMEYLPGGDMMTLLMRED------------TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNL 217 (452)
Q Consensus 150 ~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~------------~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NI 217 (452)
++++++...+..++||||+++++|.+++.... .+++..+..++.|++.||.|||++|++||||||+||
T Consensus 81 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Ni 160 (295)
T cd05097 81 RLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNC 160 (295)
T ss_pred eEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhE
Confidence 99999999999999999999999999985432 367888899999999999999999999999999999
Q ss_pred EECCCCcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhcccccccccc
Q 012988 218 LLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVG 297 (452)
Q Consensus 218 Ll~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 297 (452)
|++.++.+||+|||++..+..... ........+
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~-----------------------------------------------~~~~~~~~~ 193 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDY-----------------------------------------------YRIQGRAVL 193 (295)
T ss_pred EEcCCCcEEecccccccccccCcc-----------------------------------------------eeccCcCcC
Confidence 999999999999999875421100 000112345
Q ss_pred CCccccchhccCCCCCccchhhhhhHHHHHhhh--CCCCCCCCChHHHHHHHhhc----cCcccCCCCCCCChhHHHHHH
Q 012988 298 TPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV--GYPPFYADDPITTCRKIVHW----RNHLKFPDDSKLSPEAKDLIC 371 (452)
Q Consensus 298 t~~y~APE~~~~~~~~~~~DiwSlGvil~ellt--G~~Pf~~~~~~~~~~~i~~~----~~~~~~p~~~~~s~~~~dLi~ 371 (452)
+..|+|||++.+..++.++|||||||++|+|++ |..||...+.......+... ...........+++.+.+||.
T Consensus 194 ~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 273 (295)
T cd05097 194 PIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMM 273 (295)
T ss_pred ceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHH
Confidence 778999999998899999999999999999988 77899877666555444321 011112223357899999999
Q ss_pred Hhhc-CccccCCCCCHHHHhc
Q 012988 372 RLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 372 ~mL~-dp~~R~~~~~~~eil~ 391 (452)
+||. ||.+|| ++.+|++
T Consensus 274 ~~l~~~p~~RP---s~~~i~~ 291 (295)
T cd05097 274 RCWSRDIKDRP---TFNKIHH 291 (295)
T ss_pred HHcCCCchhCc---CHHHHHH
Confidence 9999 999999 8888753
No 324
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1e-40 Score=315.38 Aligned_cols=245 Identities=24% Similarity=0.372 Sum_probs=208.5
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEE
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLY 162 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~ 162 (452)
+..++|++.+.||.|+||.||+|... |+.||+|.+..... ....+.+|+.+++.++|+||+++++++.+.+..|
T Consensus 3 ~~~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 76 (256)
T cd05039 3 INSKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLY 76 (256)
T ss_pred cChhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeE
Confidence 45678999999999999999999764 88999999875532 4567889999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCc
Q 012988 163 LIMEYLPGGDMMTLLMRED--TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCST 240 (452)
Q Consensus 163 lV~E~~~ggsL~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~ 240 (452)
+||||+++++|.+++.... .+++..+..++.|++.||.|||++||+||||||+||+++.+|.++|+|||+++......
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~ 156 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ 156 (256)
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEccccccccccccc
Confidence 9999999999999997765 79999999999999999999999999999999999999999999999999988652110
Q ss_pred chhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhh
Q 012988 241 LYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWS 320 (452)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwS 320 (452)
....++..|+|||.+....++.++||||
T Consensus 157 ----------------------------------------------------~~~~~~~~~~ape~~~~~~~~~~~Di~s 184 (256)
T cd05039 157 ----------------------------------------------------DSGKLPVKWTAPEALREKKFSTKSDVWS 184 (256)
T ss_pred ----------------------------------------------------ccCCCcccccCchhhcCCcCCcHHHHHH
Confidence 0123456799999998888999999999
Q ss_pred hhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 321 LGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 321 lGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
||+++|+|++ |..||...........+... .....+ ..+++.+.+||.+||. +|.+|| ++.++++
T Consensus 185 lG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~li~~~l~~~p~~Rp---~~~~l~~ 251 (256)
T cd05039 185 FGILLWEIYSFGRVPYPRIPLKDVVPHVEKG-YRMEAP--EGCPPEVYKVMKDCWELDPAKRP---TFKQLRE 251 (256)
T ss_pred HHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC-CCCCCc--cCCCHHHHHHHHHHhccChhhCc---CHHHHHH
Confidence 9999999997 99999887766655554431 222233 3578999999999999 999999 8888874
No 325
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=2e-41 Score=317.02 Aligned_cols=231 Identities=29% Similarity=0.503 Sum_probs=193.1
Q ss_pred CCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeecCCCChHHH
Q 012988 97 GAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDMMTL 176 (452)
Q Consensus 97 G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~ggsL~~~ 176 (452)
|.||+||+|+++.+++.||+|++.+... ...|...+....||||+++++++.+.+.+|+||||++||+|.++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE--------YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH 75 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh--------hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence 8999999999999999999999876531 22344455556799999999999999999999999999999999
Q ss_pred HHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccccccCccccC
Q 012988 177 LMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMA 256 (452)
Q Consensus 177 l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~ 256 (452)
+.+...+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++..+...
T Consensus 76 l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----------------- 138 (237)
T cd05576 76 ISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----------------- 138 (237)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc-----------------
Confidence 988788999999999999999999999999999999999999999999999999987654211
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhhCCCCCC
Q 012988 257 EPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFY 336 (452)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~ 336 (452)
.....++..|+|||.+.+..++.++|+||+|+++|+|++|..||.
T Consensus 139 -----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~ 183 (237)
T cd05576 139 -----------------------------------CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVE 183 (237)
T ss_pred -----------------------------------cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhh
Confidence 012346778999999988889999999999999999999999886
Q ss_pred CCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC--CHHHHhcCCCc
Q 012988 337 ADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG--GAHQIKAHPWF 395 (452)
Q Consensus 337 ~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~--~~~eil~hp~f 395 (452)
..... + .....+.+| ..+++.+++||.+||+ ||.+|++.+ +++++++||||
T Consensus 184 ~~~~~-----~-~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 184 CHPSG-----I-NTHTTLNIP--EWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred cCchh-----c-ccccccCCc--ccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 43211 1 111222344 3688999999999998 999999542 46999999998
No 326
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=8.3e-41 Score=316.11 Aligned_cols=244 Identities=23% Similarity=0.410 Sum_probs=203.5
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEE-EcCCeE
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSF-QDTEYL 161 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~-~~~~~~ 161 (452)
+..++|++.+.||+|+||.||++... |..||+|.+... ...+.+.+|+.+++.++|+|++++++++ ...+.+
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 75 (256)
T cd05082 3 LNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL 75 (256)
T ss_pred ccHHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCC-----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCce
Confidence 44578999999999999999998754 788999988543 2245688899999999999999999875 455679
Q ss_pred EEEEeecCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 162 YLIMEYLPGGDMMTLLMRED--TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
|+||||+++++|.+++.... .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 76 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155 (256)
T ss_pred EEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceecccc
Confidence 99999999999999997643 4889999999999999999999999999999999999999999999999998754211
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhh
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWW 319 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Diw 319 (452)
.....++..|+|||++.+..++.++|||
T Consensus 156 ----------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~ 183 (256)
T cd05082 156 ----------------------------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVW 183 (256)
T ss_pred ----------------------------------------------------CCCCccceeecCHHHHccCCCCchhhhH
Confidence 0122345689999999988899999999
Q ss_pred hhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 320 SLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 320 SlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
||||++|+|++ |+.||...+.......+... ..... ...+++.+.++|.+||. +|.+|| ++.++++
T Consensus 184 slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp---t~~~l~~ 251 (256)
T cd05082 184 SFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-YKMDA--PDGCPPVVYDVMKQCWHLDAATRP---SFLQLRE 251 (256)
T ss_pred HHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-CCCCC--CCCCCHHHHHHHHHHhcCChhhCc---CHHHHHH
Confidence 99999999997 99999877766666555432 12222 23678999999999999 999999 8888864
No 327
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.1e-40 Score=316.24 Aligned_cols=249 Identities=23% Similarity=0.346 Sum_probs=204.7
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEE
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLY 162 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~ 162 (452)
+..++|++...||+|+||.||+|.+..+ ..+|+|++..... ..+.+.+|+.+++.++|||++++++++. .+..|
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~ 76 (260)
T cd05069 3 IPRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM----MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIY 76 (260)
T ss_pred CChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc----cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcE
Confidence 4557899999999999999999987655 4699998765422 2356788999999999999999998875 45688
Q ss_pred EEEeecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCc
Q 012988 163 LIMEYLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCST 240 (452)
Q Consensus 163 lV~E~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~ 240 (452)
+||||+++|+|.+++... ..++...+..++.|++.||.|||+.||+||||||+|||+++++.++|+|||++.......
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 77 IVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 999999999999999653 347889999999999999999999999999999999999999999999999987653111
Q ss_pred chhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhh
Q 012988 241 LYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWS 320 (452)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwS 320 (452)
. .......++..|+|||.+.+..++.++||||
T Consensus 157 ~------------------------------------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~s 188 (260)
T cd05069 157 Y------------------------------------------------TARQGAKFPIKWTAPEAALYGRFTIKSDVWS 188 (260)
T ss_pred c------------------------------------------------cccCCCccchhhCCHHHhccCCcChHHHHHH
Confidence 0 0001224667899999998888999999999
Q ss_pred hhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 321 LGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 321 lGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
||+++|+|++ |..||.+....+....+... ...+....++..+.+||.+||. ||.+|| +++++++
T Consensus 189 lG~~l~el~t~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~i~~ 255 (260)
T cd05069 189 FGILLTELVTKGRVPYPGMVNREVLEQVERG---YRMPCPQGCPESLHELMKLCWKKDPDERP---TFEYIQS 255 (260)
T ss_pred HHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC---CCCCCCcccCHHHHHHHHHHccCCcccCc---CHHHHHH
Confidence 9999999999 99999888777766665432 2223334678999999999999 999999 8887764
No 328
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.4e-41 Score=329.30 Aligned_cols=258 Identities=20% Similarity=0.322 Sum_probs=210.0
Q ss_pred cCCCCCCCeeEeceeccCCCeEEEEEEEccC-------CCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeE
Q 012988 80 RHKICVDDFELLTIIGRGAFGEVRLCREKKS-------GNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKL 151 (452)
Q Consensus 80 ~~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l 151 (452)
.+++...+|++++.||+|+||.||+|.+... +..||+|++.... .......+.+|+.+++.+ +||||+++
T Consensus 6 ~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~ 83 (334)
T cd05100 6 KWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA--TDKDLSDLVSEMEMMKMIGKHKNIINL 83 (334)
T ss_pred ccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc--CHHHHHHHHHHHHHHHhhcCCCCeeee
Confidence 4455667899999999999999999986432 2368999876432 223356788899999999 79999999
Q ss_pred EEEEEcCCeEEEEEeecCCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCC
Q 012988 152 YYSFQDTEYLYLIMEYLPGGDMMTLLMRED----------------TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPD 215 (452)
Q Consensus 152 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~----------------~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~ 215 (452)
++++.+.+.+|+||||+++|+|.+++.... .++...+..++.|++.||.|||++||+||||||+
T Consensus 84 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~ 163 (334)
T cd05100 84 LGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAAR 163 (334)
T ss_pred eEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccc
Confidence 999999999999999999999999996532 3667788889999999999999999999999999
Q ss_pred cEEECCCCcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhcccccccc
Q 012988 216 NLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFST 295 (452)
Q Consensus 216 NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (452)
|||++.++.+||+|||+++........ ......
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~~-----------------------------------------------~~~~~~ 196 (334)
T cd05100 164 NVLVTEDNVMKIADFGLARDVHNIDYY-----------------------------------------------KKTTNG 196 (334)
T ss_pred eEEEcCCCcEEECCcccceeccccccc-----------------------------------------------ccccCC
Confidence 999999999999999998865321100 001122
Q ss_pred ccCCccccchhccCCCCCccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhh
Q 012988 296 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLL 374 (452)
Q Consensus 296 ~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL 374 (452)
.++..|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+....+... . ..+....++.++.+||.+||
T Consensus 197 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~l~~li~~cl 273 (334)
T cd05100 197 RLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEG-H--RMDKPANCTHELYMIMRECW 273 (334)
T ss_pred CcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-C--CCCCCCCCCHHHHHHHHHHc
Confidence 34568999999999999999999999999999998 89999888777766666432 2 22223367899999999999
Q ss_pred c-CccccCCCCCHHHHhcC
Q 012988 375 C-DVEHRLGTGGAHQIKAH 392 (452)
Q Consensus 375 ~-dp~~R~~~~~~~eil~h 392 (452)
. +|.+|| ++.+++.+
T Consensus 274 ~~~p~~Rp---s~~ell~~ 289 (334)
T cd05100 274 HAVPSQRP---TFKQLVED 289 (334)
T ss_pred ccChhhCc---CHHHHHHH
Confidence 9 999999 89999875
No 329
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=6.3e-41 Score=322.63 Aligned_cols=254 Identities=23% Similarity=0.349 Sum_probs=208.2
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEcc-----CCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEc
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREKK-----SGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQD 157 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~ 157 (452)
+..++|++++.||.|+||.||+|.+.. ++..||+|++.... .......+.+|+.+++.++||||+++++++.+
T Consensus 2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~ 79 (288)
T cd05050 2 YPRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDHPNIVKLLGVCAV 79 (288)
T ss_pred CChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhcCCCchheEEEEEcC
Confidence 345789999999999999999998753 67899999886542 12234568889999999999999999999999
Q ss_pred CCeEEEEEeecCCCChHHHHHhcC----------------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCC
Q 012988 158 TEYLYLIMEYLPGGDMMTLLMRED----------------------TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPD 215 (452)
Q Consensus 158 ~~~~~lV~E~~~ggsL~~~l~~~~----------------------~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~ 215 (452)
...+|+||||+++|+|.+++.... .+++..+..++.|++.||.|||++|++||||||+
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~ 159 (288)
T cd05050 80 GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATR 159 (288)
T ss_pred CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHh
Confidence 999999999999999999996432 3677888999999999999999999999999999
Q ss_pred cEEECCCCcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhcccccccc
Q 012988 216 NLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFST 295 (452)
Q Consensus 216 NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (452)
|||++.++.++|+|||++..+...... ......
T Consensus 160 nil~~~~~~~~l~dfg~~~~~~~~~~~-----------------------------------------------~~~~~~ 192 (288)
T cd05050 160 NCLVGENMVVKIADFGLSRNIYSADYY-----------------------------------------------KASEND 192 (288)
T ss_pred heEecCCCceEECccccceecccCccc-----------------------------------------------cccCCC
Confidence 999999999999999998754311100 000112
Q ss_pred ccCCccccchhccCCCCCccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhh
Q 012988 296 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLL 374 (452)
Q Consensus 296 ~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL 374 (452)
.++..|+|||.+.+..++.++|||||||++|+|++ |..||.+.+..+....+.... ....| ..++.++.+||.+||
T Consensus 193 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~l~~li~~~l 269 (288)
T cd05050 193 AIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGN-VLSCP--DNCPLELYNLMRLCW 269 (288)
T ss_pred ccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC-CCCCC--CCCCHHHHHHHHHHc
Confidence 34667999999998899999999999999999997 889998888777766665422 22222 367899999999999
Q ss_pred c-CccccCCCCCHHHHhc
Q 012988 375 C-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 375 ~-dp~~R~~~~~~~eil~ 391 (452)
+ ||.+|| ++.|+++
T Consensus 270 ~~~p~~Rp---t~~el~~ 284 (288)
T cd05050 270 SKLPSDRP---SFASINR 284 (288)
T ss_pred ccCcccCC---CHHHHHH
Confidence 9 999999 8888763
No 330
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=9.6e-41 Score=318.04 Aligned_cols=255 Identities=23% Similarity=0.341 Sum_probs=210.1
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCC---EEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGN---IYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYL 161 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~---~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~ 161 (452)
..+|++.+.||+|+||.||+|..+.++. .||+|++.... .......+..|+.+++.++||||+++++++.+...+
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 80 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPV 80 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCce
Confidence 4679999999999999999999887665 69999986542 233456788999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCc
Q 012988 162 YLIMEYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCST 240 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~ 240 (452)
++||||+++|+|.+++.. .+.++...+..++.|++.||.|||++|++||||||+|||++.++.+||+|||++.......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 160 (269)
T cd05065 81 MIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 160 (269)
T ss_pred EEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCc
Confidence 999999999999999875 3568999999999999999999999999999999999999999999999999987553211
Q ss_pred chhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhh
Q 012988 241 LYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWS 320 (452)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwS 320 (452)
... .........++..|+|||.+.+..++.++||||
T Consensus 161 ~~~--------------------------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dvws 196 (269)
T cd05065 161 SDP--------------------------------------------TYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWS 196 (269)
T ss_pred ccc--------------------------------------------ccccccCCCcceeecCHhHhccCcccchhhhhh
Confidence 000 000000112245799999999899999999999
Q ss_pred hhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 321 LGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 321 lGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
|||++|||++ |..||...+.......+.. ....|....++..+.+++.+||. +|.+|| ++.+|+.
T Consensus 197 lG~~l~e~l~~g~~p~~~~~~~~~~~~i~~---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~i~~ 263 (269)
T cd05065 197 YGIVMWEVMSYGERPYWDMSNQDVINAIEQ---DYRLPPPMDCPTALHQLMLDCWQKDRNARP---KFGQIVS 263 (269)
T ss_pred hHHHHHHHhcCCCCCCCCCCHHHHHHHHHc---CCcCCCcccCCHHHHHHHHHHcCCChhhCc---CHHHHHH
Confidence 9999999886 9999988877766666643 23334444678999999999999 999999 8888875
No 331
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=3.1e-41 Score=328.88 Aligned_cols=255 Identities=22% Similarity=0.309 Sum_probs=200.0
Q ss_pred CCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeecCCCChHHHH
Q 012988 98 AFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDMMTLL 177 (452)
Q Consensus 98 ~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l 177 (452)
++|.||+++...+++.||||++..... .......+.+|+.+++.++|+||++++++|.+.+..|++|||+++|+|.+++
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l 90 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSC-SKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLL 90 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEecccc-chhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHH
Confidence 556677777788999999999976532 3345677999999999999999999999999999999999999999999999
Q ss_pred Hhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccccccCcccc
Q 012988 178 MRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENM 255 (452)
Q Consensus 178 ~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~ 255 (452)
... ..+++..++.++.|++.||+|||++||+||||||+|||++.+|.+||+|||.+..+........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~----------- 159 (314)
T cd08216 91 KTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR----------- 159 (314)
T ss_pred HHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccccc-----------
Confidence 763 4689999999999999999999999999999999999999999999999999875531110000
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC--CCCCccchhhhhhHHHHHhhhCCC
Q 012988 256 AEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK--KGYGMECDWWSLGAIMYEMLVGYP 333 (452)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~--~~~~~~~DiwSlGvil~elltG~~ 333 (452)
..........++..|+|||++.+ ..++.++|+|||||++|+|++|..
T Consensus 160 -------------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~ 208 (314)
T cd08216 160 -------------------------------VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHV 208 (314)
T ss_pred -------------------------------ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCC
Confidence 00001123457889999999876 458899999999999999999999
Q ss_pred CCCCCChHHHHHHHhhccCc------------------------------ccCCCCCCCChhHHHHHHHhhc-CccccCC
Q 012988 334 PFYADDPITTCRKIVHWRNH------------------------------LKFPDDSKLSPEAKDLICRLLC-DVEHRLG 382 (452)
Q Consensus 334 Pf~~~~~~~~~~~i~~~~~~------------------------------~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~ 382 (452)
||.................. ...+....++.++.+||.+||+ ||.+||
T Consensus 209 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp- 287 (314)
T cd08216 209 PFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRP- 287 (314)
T ss_pred CCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCc-
Confidence 99876544433221110000 0000011245788999999999 999999
Q ss_pred CCCHHHHhcCCCcCCC
Q 012988 383 TGGAHQIKAHPWFKDV 398 (452)
Q Consensus 383 ~~~~~eil~hp~f~~~ 398 (452)
++.++++||||+.+
T Consensus 288 --t~~~ll~~p~~~~~ 301 (314)
T cd08216 288 --SASQLLNHSFFKQC 301 (314)
T ss_pred --CHHHHhcCchHhhh
Confidence 99999999999865
No 332
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=3.6e-41 Score=322.64 Aligned_cols=254 Identities=33% Similarity=0.553 Sum_probs=211.9
Q ss_pred eeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEee
Q 012988 88 FELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEY 167 (452)
Q Consensus 88 y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~ 167 (452)
|++.+.||+|+||.||+|....+++.||+|++.... ........+..|+.+++.++|+||+++++++.+.+.+++||||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 678899999999999999999999999999997654 2233446677899999999999999999999999999999999
Q ss_pred cCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcc
Q 012988 168 LPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHE 246 (452)
Q Consensus 168 ~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~ 246 (452)
++ ++|.+++... ..+++..+..++.|++.||.|||++||+||||+|+||+++.++.++|+|||+++.......
T Consensus 80 ~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~----- 153 (282)
T cd07829 80 CD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR----- 153 (282)
T ss_pred cC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc-----
Confidence 96 5899999776 5899999999999999999999999999999999999999999999999999876532110
Q ss_pred ccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC-CCCccchhhhhhHHH
Q 012988 247 HKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK-GYGMECDWWSLGAIM 325 (452)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~-~~~~~~DiwSlGvil 325 (452)
......++..|+|||++.+. .++.++|+|||||++
T Consensus 154 --------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l 189 (282)
T cd07829 154 --------------------------------------------TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIF 189 (282)
T ss_pred --------------------------------------------ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHH
Confidence 01123467889999998776 789999999999999
Q ss_pred HHhhhCCCCCCCCChHHHHHHHhhccC----------------cccCCC---------CCCCChhHHHHHHHhhc-Cccc
Q 012988 326 YEMLVGYPPFYADDPITTCRKIVHWRN----------------HLKFPD---------DSKLSPEAKDLICRLLC-DVEH 379 (452)
Q Consensus 326 ~elltG~~Pf~~~~~~~~~~~i~~~~~----------------~~~~p~---------~~~~s~~~~dLi~~mL~-dp~~ 379 (452)
|+|++|.+||.+.+....+..+..... ...++. .+.++..+.++|.+||. ||.+
T Consensus 190 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~ 269 (282)
T cd07829 190 AEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAK 269 (282)
T ss_pred HHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCccc
Confidence 999999999988876666555443100 001111 12357889999999999 9999
Q ss_pred cCCCCCHHHHhcCCCc
Q 012988 380 RLGTGGAHQIKAHPWF 395 (452)
Q Consensus 380 R~~~~~~~eil~hp~f 395 (452)
|| ++.+++.||||
T Consensus 270 Rp---~~~~~l~~p~~ 282 (282)
T cd07829 270 RI---SAKEALKHPYF 282 (282)
T ss_pred CC---CHHHHhhCcCC
Confidence 99 99999999998
No 333
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.2e-40 Score=319.49 Aligned_cols=252 Identities=18% Similarity=0.285 Sum_probs=202.7
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCE----EEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNI----YAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE 159 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~----vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~ 159 (452)
..++|++++.||+|+||+||+|.+..++.. +++|.+... ........+..|+.+++.+.||||+++++++.. .
T Consensus 5 ~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~ 81 (279)
T cd05111 5 KETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR--SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-A 81 (279)
T ss_pred CHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc--cchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-C
Confidence 457899999999999999999999877774 666665322 112234567778888999999999999998754 5
Q ss_pred eEEEEEeecCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCC
Q 012988 160 YLYLIMEYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDC 238 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~ 238 (452)
..++|+||+++|+|.+++.. .+.+++..+..++.|++.||.|||+.|++||||||+|||++.++.+||+|||+++.+..
T Consensus 82 ~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 82 SLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred ccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 67899999999999999976 45789999999999999999999999999999999999999999999999999876531
Q ss_pred CcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchh
Q 012988 239 STLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDW 318 (452)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Di 318 (452)
... ........|+..|+|||.+.+..++.++||
T Consensus 162 ~~~-----------------------------------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv 194 (279)
T cd05111 162 DDK-----------------------------------------------KYFYSEHKTPIKWMALESILFGRYTHQSDV 194 (279)
T ss_pred CCc-----------------------------------------------ccccCCCCCcccccCHHHhccCCcCchhhH
Confidence 100 000112347778999999998899999999
Q ss_pred hhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 319 WSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 319 wSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
|||||++|||++ |..||.+.........+.. ...+.. ...++.++.+++.+|+. ||.+|| ++.++++
T Consensus 195 ~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~li~~c~~~~p~~Rp---s~~el~~ 263 (279)
T cd05111 195 WSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEK-GERLAQ--PQICTIDVYMVMVKCWMIDENVRP---TFKELAN 263 (279)
T ss_pred HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-CCcCCC--CCCCCHHHHHHHHHHcCCCcccCc---CHHHHHH
Confidence 999999999998 9999988776555444432 222222 23567899999999998 999999 8888865
No 334
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-42 Score=340.25 Aligned_cols=258 Identities=22% Similarity=0.286 Sum_probs=210.2
Q ss_pred hcCCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC
Q 012988 79 KRHKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT 158 (452)
Q Consensus 79 ~~~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~ 158 (452)
..+.+..++..+...||+|.||+||+|++- ..||||+++...... .+.+.|++|+.++++-+|.||+-+.|++-..
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh---GdVAVK~Lnv~~pt~-~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p 460 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH---GDVAVKLLNVDDPTP-EQLQAFKNEVAVLKKTRHENILLFMGACMNP 460 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccc---cceEEEEEecCCCCH-HHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence 457778888999999999999999999885 459999998765544 4788999999999999999999999999888
Q ss_pred CeEEEEEeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCC
Q 012988 159 EYLYLIMEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLD 237 (452)
Q Consensus 159 ~~~~lV~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~ 237 (452)
.. .||+.+|.|.+|+.+|+-. ..|.....+.|+.|+++|+.|||.++|||||||..||++.+++.|||+||||+..-.
T Consensus 461 ~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~ 539 (678)
T KOG0193|consen 461 PL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKT 539 (678)
T ss_pred ce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeee
Confidence 77 8999999999999999653 578889999999999999999999999999999999999999999999999986321
Q ss_pred CCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC---CCCCc
Q 012988 238 CSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK---KGYGM 314 (452)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~---~~~~~ 314 (452)
.|. ...-.....|...|||||++.. .+|+.
T Consensus 540 -----------------------------------~w~------------g~~q~~qp~gsilwmAPEvIRmqd~nPfS~ 572 (678)
T KOG0193|consen 540 -----------------------------------RWS------------GEQQLEQPHGSLLWMAPEVIRMQDDNPFSF 572 (678)
T ss_pred -----------------------------------eec------------cccccCCCccchhhhcHHHHhhcccCCCCc
Confidence 000 0001113358889999999973 57899
Q ss_pred cchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCccc-CCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 315 ECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLK-FPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 315 ~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~-~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
.+|||||||++|||++|..||...+...++..+-.+-.... ......++.++++|+..|+. ++++|| .+.+||.
T Consensus 573 qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP---~F~~il~ 648 (678)
T KOG0193|consen 573 QSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERP---LFPQLLS 648 (678)
T ss_pred ccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCc---cHHHHHH
Confidence 99999999999999999999996665554444332200000 11123567899999999999 999999 7888774
No 335
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.1e-40 Score=322.40 Aligned_cols=255 Identities=21% Similarity=0.382 Sum_probs=204.3
Q ss_pred CCCeeEeceeccCCCeEEEEEEEcc----------------CCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCce
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKK----------------SGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCI 148 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~----------------~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i 148 (452)
.++|++.+.||+|+||+||+|.+.. ++..||+|++.... .......+.+|+.+++.++|+||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~~~~i 81 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLKDPNI 81 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCc
Confidence 4679999999999999999986532 34579999886542 22334678899999999999999
Q ss_pred eeEEEEEEcCCeEEEEEeecCCCChHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcE
Q 012988 149 VKLYYSFQDTEYLYLIMEYLPGGDMMTLLMRED-----------TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNL 217 (452)
Q Consensus 149 v~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~-----------~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NI 217 (452)
+++++++.+.+.+|+||||+++|+|.+++.... .+++..+..++.|++.||.|||+.||+||||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Ni 161 (296)
T cd05095 82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNC 161 (296)
T ss_pred ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheE
Confidence 999999999999999999999999999986642 366778999999999999999999999999999999
Q ss_pred EECCCCcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhcccccccccc
Q 012988 218 LLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVG 297 (452)
Q Consensus 218 Ll~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 297 (452)
|++.++.++|+|||+++.+...... .......+
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~-----------------------------------------------~~~~~~~~ 194 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYY-----------------------------------------------RIQGRAVL 194 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcce-----------------------------------------------eccCcCcC
Confidence 9999999999999998865321100 00112235
Q ss_pred CCccccchhccCCCCCccchhhhhhHHHHHhhh--CCCCCCCCChHHHHHHHhhc----cCcccCCCCCCCChhHHHHHH
Q 012988 298 TPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV--GYPPFYADDPITTCRKIVHW----RNHLKFPDDSKLSPEAKDLIC 371 (452)
Q Consensus 298 t~~y~APE~~~~~~~~~~~DiwSlGvil~ellt--G~~Pf~~~~~~~~~~~i~~~----~~~~~~p~~~~~s~~~~dLi~ 371 (452)
++.|+|||+..+..++.++|||||||++|||++ |..||...+..+.......+ ......|....+++.+.+||.
T Consensus 195 ~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 274 (296)
T cd05095 195 PIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLML 274 (296)
T ss_pred ccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHH
Confidence 678999999988889999999999999999998 78999876665554433211 112233444567899999999
Q ss_pred Hhhc-CccccCCCCCHHHHhc
Q 012988 372 RLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 372 ~mL~-dp~~R~~~~~~~eil~ 391 (452)
+||. ||.+|| ++.+|.+
T Consensus 275 ~cl~~~p~~Rp---~~~~i~~ 292 (296)
T cd05095 275 SCWRRNAKERP---SFQEIHA 292 (296)
T ss_pred HHcCCCcccCC---CHHHHHH
Confidence 9999 999999 7877753
No 336
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1e-40 Score=321.58 Aligned_cols=250 Identities=23% Similarity=0.335 Sum_probs=204.4
Q ss_pred CeeEeceeccCCCeEEEEEEEcc-----CCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeE
Q 012988 87 DFELLTIIGRGAFGEVRLCREKK-----SGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYL 161 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~ 161 (452)
+|++.+.||+|+||+||+|.+.. ....+|+|++..... ......+.+|+.+++.++||||+++++.+...+..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS--SSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC--HHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence 58899999999999999998753 235788888765421 22346788899999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHHhc------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcE
Q 012988 162 YLIMEYLPGGDMMTLLMRE------------------------DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNL 217 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~------------------------~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NI 217 (452)
++||||+++|+|.+++... ..++...+..++.|++.||.|||+.||+||||||+||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~ni 158 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNV 158 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheE
Confidence 9999999999999998542 2477888999999999999999999999999999999
Q ss_pred EECCCCcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhcccccccccc
Q 012988 218 LLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVG 297 (452)
Q Consensus 218 Ll~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 297 (452)
|+++++.+||+|||+++.+...... .......+
T Consensus 159 ll~~~~~~kl~dfg~~~~~~~~~~~-----------------------------------------------~~~~~~~~ 191 (290)
T cd05045 159 LVAEGRKMKISDFGLSRDVYEEDSY-----------------------------------------------VKRSKGRI 191 (290)
T ss_pred EEcCCCcEEeccccccccccCccch-----------------------------------------------hcccCCCC
Confidence 9999999999999998754211100 00012245
Q ss_pred CCccccchhccCCCCCccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-
Q 012988 298 TPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC- 375 (452)
Q Consensus 298 t~~y~APE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~- 375 (452)
+..|+|||++.+..++.++||||||+++|+|++ |..||.+..+......+.. ....+....++.++.+||.+||.
T Consensus 192 ~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~cl~~ 268 (290)
T cd05045 192 PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKT---GYRMERPENCSEEMYNLMLTCWKQ 268 (290)
T ss_pred CccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhC---CCCCCCCCCCCHHHHHHHHHHccC
Confidence 678999999988889999999999999999998 9999988877666554432 22333334688999999999999
Q ss_pred CccccCCCCCHHHHhc
Q 012988 376 DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 376 dp~~R~~~~~~~eil~ 391 (452)
+|.+|| ++.++++
T Consensus 269 ~P~~Rp---~~~~i~~ 281 (290)
T cd05045 269 EPDKRP---TFADISK 281 (290)
T ss_pred CcccCC---CHHHHHH
Confidence 999999 8888764
No 337
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.6e-40 Score=316.92 Aligned_cols=242 Identities=24% Similarity=0.389 Sum_probs=198.0
Q ss_pred ceeccCCCeEEEEEEEccCCC--EEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEEcCCeEEEEEeec
Q 012988 92 TIIGRGAFGEVRLCREKKSGN--IYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQDTEYLYLIMEYL 168 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~~~~lV~E~~ 168 (452)
+.||+|+||.||+|..+.++. .+|+|.+.... .......+.+|+.+++.+ +||||+++++++...+.+|+||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 78 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC--CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence 368999999999999988776 46888775321 223345788899999999 8999999999999999999999999
Q ss_pred CCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccC
Q 012988 169 PGGDMMTLLMRED----------------TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGL 232 (452)
Q Consensus 169 ~ggsL~~~l~~~~----------------~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGl 232 (452)
++|+|.+++.... .+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus 79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl 158 (270)
T cd05047 79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGL 158 (270)
T ss_pred CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCC
Confidence 9999999996543 478889999999999999999999999999999999999999999999999
Q ss_pred CccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCC
Q 012988 233 CKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGY 312 (452)
Q Consensus 233 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 312 (452)
+....... ......++..|+|||++....+
T Consensus 159 ~~~~~~~~--------------------------------------------------~~~~~~~~~~y~apE~~~~~~~ 188 (270)
T cd05047 159 SRGQEVYV--------------------------------------------------KKTMGRLPVRWMAIESLNYSVY 188 (270)
T ss_pred ccccchhh--------------------------------------------------hccCCCCccccCChHHHccCCC
Confidence 76321000 0001224567999999988889
Q ss_pred CccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHh
Q 012988 313 GMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIK 390 (452)
Q Consensus 313 ~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil 390 (452)
+.++|||||||++|+|++ |..||.+.+.......+... ...+....++.++.+||.+|+. ||.+|| ++.+++
T Consensus 189 ~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~il 262 (270)
T cd05047 189 TTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERP---SFAQIL 262 (270)
T ss_pred CchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCC---CCCCCCCcCCHHHHHHHHHHcccChhhCC---CHHHHH
Confidence 999999999999999997 99999887776666655431 1222223578999999999999 999999 888887
Q ss_pred c
Q 012988 391 A 391 (452)
Q Consensus 391 ~ 391 (452)
.
T Consensus 263 ~ 263 (270)
T cd05047 263 V 263 (270)
T ss_pred H
Confidence 4
No 338
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.7e-40 Score=318.90 Aligned_cols=252 Identities=23% Similarity=0.363 Sum_probs=197.7
Q ss_pred CCe-eEeceeccCCCeEEEEEE----EccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC--
Q 012988 86 DDF-ELLTIIGRGAFGEVRLCR----EKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT-- 158 (452)
Q Consensus 86 ~~y-~i~~~LG~G~~g~V~~a~----~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~-- 158 (452)
++| ++++.||+|+||+||++. ...++..||+|++..... ......+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 80 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG--QQNTSGWKKEINILKTLYHENIVKYKGCCSEQGG 80 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 445 999999999999998865 345788999999865421 22345678899999999999999999987653
Q ss_pred CeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCC
Q 012988 159 EYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDC 238 (452)
Q Consensus 159 ~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~ 238 (452)
..+|+||||+++|+|.+++.. ..+++..++.++.|++.||.|||++||+||||||+|||++.++.++|+|||+++.+..
T Consensus 81 ~~~~lv~e~~~~~~l~~~~~~-~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 159 (283)
T cd05080 81 KGLQLIMEYVPLGSLRDYLPK-HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 159 (283)
T ss_pred ceEEEEecCCCCCCHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCC
Confidence 468999999999999999865 4699999999999999999999999999999999999999999999999999886532
Q ss_pred CcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchh
Q 012988 239 STLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDW 318 (452)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Di 318 (452)
.... ........++..|+|||++.+..++.++||
T Consensus 160 ~~~~----------------------------------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di 193 (283)
T cd05080 160 GHEY----------------------------------------------YRVREDGDSPVFWYAVECLKENKFSYASDV 193 (283)
T ss_pred cchh----------------------------------------------hccCCCCCCCceeeCHhHhcccCCCccccc
Confidence 1100 000012235667999999988889999999
Q ss_pred hhhhHHHHHhhhCCCCCCCCChHH--------------HHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCC
Q 012988 319 WSLGAIMYEMLVGYPPFYADDPIT--------------TCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGT 383 (452)
Q Consensus 319 wSlGvil~elltG~~Pf~~~~~~~--------------~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~ 383 (452)
||||+++|+|++|..||....... ........ ....+....++.++.+++.+||. ||.+||
T Consensus 194 ~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-- 269 (283)
T cd05080 194 WSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLER--GMRLPCPKNCPQEVYILMKNCWETEAKFRP-- 269 (283)
T ss_pred HHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhc--CCCCCCCCCCCHHHHHHHHHHhccChhhCC--
Confidence 999999999999999986433210 01111111 11222234678999999999999 999999
Q ss_pred CCHHHHhc
Q 012988 384 GGAHQIKA 391 (452)
Q Consensus 384 ~~~~eil~ 391 (452)
++.+++.
T Consensus 270 -s~~~i~~ 276 (283)
T cd05080 270 -TFRSLIP 276 (283)
T ss_pred -CHHHHHH
Confidence 8888874
No 339
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.9e-40 Score=314.16 Aligned_cols=244 Identities=25% Similarity=0.362 Sum_probs=198.3
Q ss_pred eeccCCCeEEEEEEEc--cCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeecCC
Q 012988 93 IIGRGAFGEVRLCREK--KSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPG 170 (452)
Q Consensus 93 ~LG~G~~g~V~~a~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~g 170 (452)
.||+|+||.||+|... .++..||+|++.... .....+.+.+|+.+++.++||||+++++++.. ..+++||||+++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~ 78 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASG 78 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCC
Confidence 4899999999999765 445679999886542 23344668899999999999999999998864 578999999999
Q ss_pred CChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccccc
Q 012988 171 GDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKT 249 (452)
Q Consensus 171 gsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~ 249 (452)
|+|.+++.. ...+++..+..++.|++.||.|||++|++||||||+|||++.++.+||+|||+++.+.......
T Consensus 79 ~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~------ 152 (257)
T cd05115 79 GPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYY------ 152 (257)
T ss_pred CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccce------
Confidence 999999875 4578999999999999999999999999999999999999999999999999987553211000
Q ss_pred cCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhh
Q 012988 250 IDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 329 (452)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ell 329 (452)
.......+++.|+|||++.+..++.++|||||||++|+|+
T Consensus 153 ----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 192 (257)
T cd05115 153 ----------------------------------------KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAF 192 (257)
T ss_pred ----------------------------------------eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHh
Confidence 0001123467899999998888999999999999999999
Q ss_pred h-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 330 V-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 330 t-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
+ |..||......+....+... .....| ..+++++.+||.+|+. ||.+|| ++.+|.+
T Consensus 193 ~~g~~p~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~l~~li~~c~~~~~~~Rp---~~~~i~~ 250 (257)
T cd05115 193 SYGQKPYKKMKGPEVMSFIEQG-KRLDCP--AECPPEMYALMKDCWIYKWEDRP---NFAKVEE 250 (257)
T ss_pred cCCCCCcCcCCHHHHHHHHHCC-CCCCCC--CCCCHHHHHHHHHHcCCChhhCc---CHHHHHH
Confidence 6 99999988877766666543 223333 3678999999999999 999999 6666643
No 340
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2.8e-40 Score=313.33 Aligned_cols=249 Identities=23% Similarity=0.364 Sum_probs=206.0
Q ss_pred CCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeE
Q 012988 82 KICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYL 161 (452)
Q Consensus 82 ~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~ 161 (452)
++..++|++.+.||+|+||.||+|... .+..+|+|++.... .....+.+|+.+++.++|+||+++++++.+ ...
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~ 75 (260)
T cd05073 2 EIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS----MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPI 75 (260)
T ss_pred cccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh----hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCe
Confidence 456789999999999999999999754 45679999886542 234567889999999999999999999987 778
Q ss_pred EEEEeecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 162 YLIMEYLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
|+||||+++|+|.+++.+. ..++...+..++.|++.||.|||+.|++||||||+||+++.++.+||+|||++..+...
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 155 (260)
T cd05073 76 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN 155 (260)
T ss_pred EEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCC
Confidence 9999999999999999763 45788888999999999999999999999999999999999999999999998765311
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhh
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWW 319 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Diw 319 (452)
.. .......++..|+|||++....++.++|+|
T Consensus 156 ~~------------------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~ 187 (260)
T cd05073 156 EY------------------------------------------------TAREGAKFPIKWTAPEAINFGSFTIKSDVW 187 (260)
T ss_pred Cc------------------------------------------------ccccCCcccccccCHhHhccCCcCccccch
Confidence 00 000122456789999999988899999999
Q ss_pred hhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHh
Q 012988 320 SLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIK 390 (452)
Q Consensus 320 SlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil 390 (452)
||||++|++++ |..||.+.+.......+.. ....+.....+.++.+++.+||. +|.+|| ++.+++
T Consensus 188 slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp---~~~~l~ 254 (260)
T cd05073 188 SFGILLMEIVTYGRIPYPGMSNPEVIRALER---GYRMPRPENCPEELYNIMMRCWKNRPEERP---TFEYIQ 254 (260)
T ss_pred HHHHHHHHHHhcCCCCCCCCCHHHHHHHHhC---CCCCCCcccCCHHHHHHHHHHcccCcccCc---CHHHHH
Confidence 99999999998 9999988777666655543 22333334688999999999999 999999 777665
No 341
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=6.7e-41 Score=317.74 Aligned_cols=248 Identities=33% Similarity=0.489 Sum_probs=201.7
Q ss_pred eEeceeccCCCeEEEEEEEc----cCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 89 ELLTIIGRGAFGEVRLCREK----KSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 89 ~i~~~LG~G~~g~V~~a~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
.+.+.||.|+||.||+|... ..+..|+||+++.. ......+.+.+|+.+++.++||||+++++++...+.+++|
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv 79 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLV 79 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeeccccccccccccccccccccccccccccc
Confidence 46789999999999999988 34678999998542 2223367889999999999999999999999988889999
Q ss_pred EeecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcch
Q 012988 165 MEYLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLY 242 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~ 242 (452)
|||+++|+|.++|... ..++......++.|++.||.|||+++|+|+||+++|||++.++.+||+|||++.........
T Consensus 80 ~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~ 159 (259)
T PF07714_consen 80 MEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY 159 (259)
T ss_dssp EE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999886 68999999999999999999999999999999999999999999999999998865211100
Q ss_pred hhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhh
Q 012988 243 AIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLG 322 (452)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlG 322 (452)
.......+...|+|||.+.+..++.++||||||
T Consensus 160 -----------------------------------------------~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG 192 (259)
T PF07714_consen 160 -----------------------------------------------KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFG 192 (259)
T ss_dssp -----------------------------------------------EESTTSESGGGGS-HHHHHHSEESHHHHHHHHH
T ss_pred -----------------------------------------------ccccccccccccccccccccccccccccccccc
Confidence 011123466789999999988899999999999
Q ss_pred HHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 323 AIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 323 vil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
+++|||++ |..||...+.......+.. ......+ ..++..+.++|.+|+. ||.+|| ++.+|++
T Consensus 193 ~~l~ei~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~li~~C~~~~p~~RP---s~~~i~~ 257 (259)
T PF07714_consen 193 MLLYEILTLGKFPFSDYDNEEIIEKLKQ-GQRLPIP--DNCPKDIYSLIQQCWSHDPEKRP---SFQEILQ 257 (259)
T ss_dssp HHHHHHHTTSSGTTTTSCHHHHHHHHHT-TEETTSB--TTSBHHHHHHHHHHT-SSGGGS-----HHHHHH
T ss_pred cccccccccccccccccccccccccccc-cccceec--cchhHHHHHHHHHHcCCChhhCc---CHHHHHh
Confidence 99999999 7899988888777777743 2333333 3689999999999998 999999 8998874
No 342
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.6e-40 Score=314.04 Aligned_cols=246 Identities=20% Similarity=0.332 Sum_probs=205.3
Q ss_pred ceeccCCCeEEEEEEEcc-CCC--EEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeec
Q 012988 92 TIIGRGAFGEVRLCREKK-SGN--IYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYL 168 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~ 168 (452)
+.||+|+||.||+|.+.. .+. .||+|++...... ...+.+.+|+.+++.++||||+++++.+.+ ..+++||||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence 468999999999999865 333 6999998765432 456778899999999999999999999988 8899999999
Q ss_pred CCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcc
Q 012988 169 PGGDMMTLLMRED--TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHE 246 (452)
Q Consensus 169 ~ggsL~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~ 246 (452)
++|+|.+++.... .+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||+++.+......
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~---- 153 (257)
T cd05040 78 PLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH---- 153 (257)
T ss_pred CCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccc----
Confidence 9999999997754 6899999999999999999999999999999999999999999999999999876321100
Q ss_pred ccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHH
Q 012988 247 HKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 326 (452)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ 326 (452)
........++..|+|||++.+..++.++|||||||++|
T Consensus 154 ------------------------------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~ 191 (257)
T cd05040 154 ------------------------------------------YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLW 191 (257)
T ss_pred ------------------------------------------eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHH
Confidence 00001235778899999999889999999999999999
Q ss_pred Hhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 327 EMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 327 ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
+|++ |..||...+..+....+.........+ ..++..+.++|.+||+ +|.+|| ++.+++.
T Consensus 192 el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rp---s~~~~~~ 253 (257)
T cd05040 192 EMFTYGEEPWAGLSGSQILKKIDKEGERLERP--EACPQDIYNVMLQCWAHNPADRP---TFAALRE 253 (257)
T ss_pred HHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCC--ccCCHHHHHHHHHHCCCCcccCC---CHHHHHH
Confidence 9998 999998887777766665432333333 3678999999999999 999999 8888874
No 343
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1e-40 Score=319.97 Aligned_cols=252 Identities=35% Similarity=0.549 Sum_probs=207.0
Q ss_pred eeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhC-CCceeeEEEEEEcCCeEEEEEe
Q 012988 88 FELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVA-SHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 88 y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~~~~~~~lV~E 166 (452)
|++.+.||.|+||+||+|....+++.||||++...... .......+|+..++.+. |+||+++++++.+.+..|+|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS--WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc--hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 67899999999999999999989999999998654221 12223456889999999 9999999999999999999999
Q ss_pred ecCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 167 YLPGGDMMTLLMRED--TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 167 ~~~ggsL~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
|+ +|+|.+++.... .+++..+..++.|++.||.|||++||+|+||+|+||+++.++.++|+|||++.......
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~---- 153 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP---- 153 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCC----
Confidence 99 889999887754 78999999999999999999999999999999999999999999999999987553210
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchhhhhhH
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 323 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~DiwSlGv 323 (452)
......|+..|+|||++.+ ..++.++|+||||+
T Consensus 154 ----------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~ 187 (283)
T cd07830 154 ----------------------------------------------PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGC 187 (283)
T ss_pred ----------------------------------------------CcCCCCCcccccCceeeecCcCcCCccchhhHHH
Confidence 0113458889999998854 55789999999999
Q ss_pred HHHHhhhCCCCCCCCChHHHHHHHhhccCcc-----------------cCCC---------CCCCChhHHHHHHHhhc-C
Q 012988 324 IMYEMLVGYPPFYADDPITTCRKIVHWRNHL-----------------KFPD---------DSKLSPEAKDLICRLLC-D 376 (452)
Q Consensus 324 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~-----------------~~p~---------~~~~s~~~~dLi~~mL~-d 376 (452)
++|+|++|++||...+..+....+....... .++. ....+..+.+||.+||+ |
T Consensus 188 ~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~ 267 (283)
T cd07830 188 IMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWD 267 (283)
T ss_pred HHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccC
Confidence 9999999999998877666555443311110 0000 01236889999999999 9
Q ss_pred ccccCCCCCHHHHhcCCCc
Q 012988 377 VEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 377 p~~R~~~~~~~eil~hp~f 395 (452)
|.+|| ++.|++.||||
T Consensus 268 p~~Rp---t~~ei~~~~~~ 283 (283)
T cd07830 268 PKKRP---TASQALQHPYF 283 (283)
T ss_pred cccCC---CHHHHhhCCCC
Confidence 99999 99999999998
No 344
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=7.8e-42 Score=357.30 Aligned_cols=271 Identities=29% Similarity=0.460 Sum_probs=205.7
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEc-------
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQD------- 157 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~------- 157 (452)
..+|+.+..||+||||.||+|+++-+|..||||+|.... .......+.+|+.+|++|+|||||++|..|.+
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 468999999999999999999999999999999997654 34455678999999999999999999977610
Q ss_pred --------------------------------------------------------------------------------
Q 012988 158 -------------------------------------------------------------------------------- 157 (452)
Q Consensus 158 -------------------------------------------------------------------------------- 157 (452)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ------------------------C--------CeEEEEEeecCCCChHHHHHhcCCC-CHHHHHHHHHHHHHHHHHHHH
Q 012988 158 ------------------------T--------EYLYLIMEYLPGGDMMTLLMREDTL-TENVARFYIAQSVLAIESIHK 204 (452)
Q Consensus 158 ------------------------~--------~~~~lV~E~~~ggsL~~~l~~~~~~-~~~~~~~~~~ql~~aL~~LH~ 204 (452)
+ ..+||-||||+...|.+++.++... ..+.++.+++||+.||.|+|+
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~ 715 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHD 715 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHh
Confidence 0 2479999999988888888766555 577899999999999999999
Q ss_pred CCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHh
Q 012988 205 HNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHW 284 (452)
Q Consensus 205 ~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (452)
.|||||||||.||++++++.|||+|||+|......... .+....+-....+
T Consensus 716 ~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~----------------~d~~~~~~~~~~g------------- 766 (1351)
T KOG1035|consen 716 QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLES----------------IDQDLSFSTNRAG------------- 766 (1351)
T ss_pred CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhh----------------HhhccCccccccC-------------
Confidence 99999999999999999999999999999863210000 0000000000000
Q ss_pred hhhccccccccccCCccccchhccCCC---CCccchhhhhhHHHHHhhhCCCCCCCC-ChHHHHHHHhhccCcccCCCC-
Q 012988 285 QMNRRKLAFSTVGTPDYIAPEVLLKKG---YGMECDWWSLGAIMYEMLVGYPPFYAD-DPITTCRKIVHWRNHLKFPDD- 359 (452)
Q Consensus 285 ~~~~~~~~~~~~Gt~~y~APE~~~~~~---~~~~~DiwSlGvil~elltG~~Pf~~~-~~~~~~~~i~~~~~~~~~p~~- 359 (452)
......++.+||..|+|||++.+.. |+.|+|+|||||+||||+ .||... .....+.++. ...+++|..
T Consensus 767 --~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~---yPF~TsMERa~iL~~LR--~g~iP~~~~f 839 (1351)
T KOG1035|consen 767 --SNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEML---YPFGTSMERASILTNLR--KGSIPEPADF 839 (1351)
T ss_pred --CCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHh---ccCCchHHHHHHHHhcc--cCCCCCCccc
Confidence 0112345779999999999998754 999999999999999998 456433 2223333332 233444411
Q ss_pred -CCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcC
Q 012988 360 -SKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFK 396 (452)
Q Consensus 360 -~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~ 396 (452)
..--+....+|++||. ||.+|| ||.|+|++.||-
T Consensus 840 ~~~~~~~e~slI~~Ll~hdP~kRP---tA~eLL~s~llp 875 (1351)
T KOG1035|consen 840 FDPEHPEEASLIRWLLSHDPSKRP---TATELLNSELLP 875 (1351)
T ss_pred ccccchHHHHHHHHHhcCCCccCC---CHHHHhhccCCC
Confidence 1123667789999999 999999 999999999997
No 345
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=7.8e-41 Score=316.93 Aligned_cols=253 Identities=30% Similarity=0.486 Sum_probs=210.1
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhc--ccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMV--KRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
+|.+.+.||+|+||.||++.+..++..+++|+++..... .......+..|+.+++.++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 589999999999999999999888888888877643321 122334567789999999999999999999999999999
Q ss_pred EeecCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCc
Q 012988 165 MEYLPGGDMMTLLMR----EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCST 240 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~ 240 (452)
|||+++++|.+++.. ...+++..+..++.|++.||.|||+.|++|+||||+||+++. +.++|+|||+++......
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~ 159 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC 159 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence 999999999988853 357899999999999999999999999999999999999975 569999999987653110
Q ss_pred chhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhh
Q 012988 241 LYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWS 320 (452)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwS 320 (452)
.......|++.|+|||.+.+..++.++|+||
T Consensus 160 -------------------------------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~s 190 (260)
T cd08222 160 -------------------------------------------------DLATTFTGTPYYMSPEALKHQGYDSKSDIWS 190 (260)
T ss_pred -------------------------------------------------ccccCCCCCcCccCHHHHccCCCCchhhHHH
Confidence 0011345888999999998888999999999
Q ss_pred hhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 321 LGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 321 lGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
||+++|+|++|..||...+.......+... .....+ ..++.++.++|.+||. ||.+|| ++.+++.||||
T Consensus 191 lG~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~li~~~l~~~p~~Rp---~~~~il~~~~~ 260 (260)
T cd08222 191 LGCILYEMCCLAHAFEGQNFLSVVLRIVEG-PTPSLP--ETYSRQLNSIMQSMLNKDPSLRP---SAAEILRNPFI 260 (260)
T ss_pred HHHHHHHHHhCCCCCCCccHHHHHHHHHcC-CCCCCc--chhcHHHHHHHHHHhcCChhhCc---CHHHHhhCCCC
Confidence 999999999999999877766666555432 112222 3578999999999998 999999 99999999997
No 346
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=3.6e-40 Score=315.88 Aligned_cols=251 Identities=21% Similarity=0.316 Sum_probs=207.7
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCC----EEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGN----IYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE 159 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~ 159 (452)
..++|++++.||+|+||+||+|.++.+|. .+|+|++..... ......+.+|+.+++.++||||+++++++.. .
T Consensus 5 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~ 81 (279)
T cd05057 5 KETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANKEILDEAYVMASVDHPHVVRLLGICLS-S 81 (279)
T ss_pred CHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-C
Confidence 45789999999999999999999877665 589998765532 3344668889999999999999999999887 7
Q ss_pred eEEEEEeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCC
Q 012988 160 YLYLIMEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDC 238 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~ 238 (452)
..++||||+++|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.+..
T Consensus 82 ~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 82 QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred ceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 899999999999999999764 5689999999999999999999999999999999999999999999999999986532
Q ss_pred CcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchh
Q 012988 239 STLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDW 318 (452)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Di 318 (452)
.... .......++..|+|||.+....++.++||
T Consensus 162 ~~~~-----------------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di 194 (279)
T cd05057 162 DEKE-----------------------------------------------YHAEGGKVPIKWMALESILHRIYTHKSDV 194 (279)
T ss_pred cccc-----------------------------------------------eecCCCcccccccCHHHhhcCCcCchhhH
Confidence 1100 00001224568999999988889999999
Q ss_pred hhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHh
Q 012988 319 WSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIK 390 (452)
Q Consensus 319 wSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil 390 (452)
||||+++||+++ |..||.+....+....+... ..+ +.+...+..+.+++.+||. ||..|| ++.+++
T Consensus 195 ~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~l~~~p~~Rp---~~~~l~ 262 (279)
T cd05057 195 WSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKG-ERL--PQPPICTIDVYMVLVKCWMIDAESRP---TFKELI 262 (279)
T ss_pred HHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCC-CCC--CCCCCCCHHHHHHHHHHcCCChhhCC---CHHHHH
Confidence 999999999998 99999988776666555542 223 3333578999999999998 999999 777765
No 347
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1e-40 Score=319.70 Aligned_cols=254 Identities=35% Similarity=0.561 Sum_probs=211.1
Q ss_pred eeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEee
Q 012988 88 FELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEY 167 (452)
Q Consensus 88 y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~ 167 (452)
|++.+.||.|++|.||+|.+..+++.+|+|++..... .......+..|+.+++.++|+||+++++++.+...+|+||||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-SEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-cchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence 6788999999999999999999999999999875532 223456778899999999999999999999999999999999
Q ss_pred cCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcc
Q 012988 168 LPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHE 246 (452)
Q Consensus 168 ~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~ 246 (452)
+++ +|.+++.. ...+++..+..++.|++.||.|||+.||+|+||||+||+++.++.++|+|||.+.......
T Consensus 80 ~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~------ 152 (283)
T cd05118 80 MDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV------ 152 (283)
T ss_pred cCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc------
Confidence 965 88888766 4689999999999999999999999999999999999999999999999999987653211
Q ss_pred ccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC-CCCccchhhhhhHHH
Q 012988 247 HKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK-GYGMECDWWSLGAIM 325 (452)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~-~~~~~~DiwSlGvil 325 (452)
.......++..|+|||.+.+. .++.++|+||||+++
T Consensus 153 -------------------------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l 189 (283)
T cd05118 153 -------------------------------------------RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIF 189 (283)
T ss_pred -------------------------------------------ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHH
Confidence 001123578899999999876 789999999999999
Q ss_pred HHhhhCCCCCCCCChHHHHHHHhhccCc-----------------ccCCC---------CCCCChhHHHHHHHhhc-Ccc
Q 012988 326 YEMLVGYPPFYADDPITTCRKIVHWRNH-----------------LKFPD---------DSKLSPEAKDLICRLLC-DVE 378 (452)
Q Consensus 326 ~elltG~~Pf~~~~~~~~~~~i~~~~~~-----------------~~~p~---------~~~~s~~~~dLi~~mL~-dp~ 378 (452)
|+|++|+.||.+.+..+.+..+...... ..++. ...++.++.+||.+||. ||.
T Consensus 190 ~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~ 269 (283)
T cd05118 190 AELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPH 269 (283)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcc
Confidence 9999999999888776665554331110 01110 12367899999999999 999
Q ss_pred ccCCCCCHHHHhcCCCc
Q 012988 379 HRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 379 ~R~~~~~~~eil~hp~f 395 (452)
+|| ++.+++.||||
T Consensus 270 ~Rp---~~~~ll~~~~~ 283 (283)
T cd05118 270 KRI---TAEQALAHPYF 283 (283)
T ss_pred cCc---CHHHHhhCCCC
Confidence 999 99999999997
No 348
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=3.4e-40 Score=316.09 Aligned_cols=254 Identities=20% Similarity=0.295 Sum_probs=208.6
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEcc----CCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEc-
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREKK----SGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQD- 157 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~- 157 (452)
+..++|++.+.||+|+||.||+|.+.. ++..||+|++... ........+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 80 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH--ASEIQVTLLLQESCLLYGLSHQNILPILHVCIED 80 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 456789999999999999999999876 3578999987643 233445678899999999999999999998665
Q ss_pred CCeEEEEEeecCCCChHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEee
Q 012988 158 TEYLYLIMEYLPGGDMMTLLMRE--------DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSD 229 (452)
Q Consensus 158 ~~~~~lV~E~~~ggsL~~~l~~~--------~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~D 229 (452)
....+++++|+++|+|..++... ..+++..+..++.|++.||.|||++|++||||||+|||++.++.+||+|
T Consensus 81 ~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 81 GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECC
Confidence 56789999999999999998653 4588999999999999999999999999999999999999999999999
Q ss_pred ccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC
Q 012988 230 FGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK 309 (452)
Q Consensus 230 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~ 309 (452)
||+++.+...... .......++..|+|||++.+
T Consensus 161 ~g~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~y~apE~~~~ 193 (280)
T cd05043 161 NALSRDLFPMDYH-----------------------------------------------CLGDNENRPVKWMALESLVN 193 (280)
T ss_pred CCCcccccCCceE-----------------------------------------------EeCCCCCcchhccCHHHHhc
Confidence 9999865322100 00012235678999999998
Q ss_pred CCCCccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHH
Q 012988 310 KGYGMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAH 387 (452)
Q Consensus 310 ~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~ 387 (452)
..++.++|||||||++|++++ |+.||...+..+....+.. ....+....+++++.++|.+|+. ||.+|| ++.
T Consensus 194 ~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~ 267 (280)
T cd05043 194 KEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKD---GYRLAQPINCPDELFAVMACCWALDPEERP---SFS 267 (280)
T ss_pred CCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHc---CCCCCCCCcCCHHHHHHHHHHcCCChhhCC---CHH
Confidence 889999999999999999999 9999988777665554443 22233334678999999999999 999999 888
Q ss_pred HHhc
Q 012988 388 QIKA 391 (452)
Q Consensus 388 eil~ 391 (452)
+++.
T Consensus 268 ~~~~ 271 (280)
T cd05043 268 QLVQ 271 (280)
T ss_pred HHHH
Confidence 8874
No 349
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=2.2e-40 Score=318.29 Aligned_cols=253 Identities=23% Similarity=0.399 Sum_probs=201.1
Q ss_pred CeeEeceeccCCCeEEEEEEE----ccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC--Ce
Q 012988 87 DFELLTIIGRGAFGEVRLCRE----KKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT--EY 160 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~--~~ 160 (452)
-|++++.||+|+||.||+|.. ..++..||+|.+.... .......+.+|+.+++.+.||||+++++++.+. ..
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence 478999999999999999974 4578899999986442 223346788999999999999999999998875 57
Q ss_pred EEEEEeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 161 LYLIMEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 161 ~~lV~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
+++||||++|++|.+++.+. ..+++..+..++.|++.||+|||++||+||||||+|||++.++.++|+|||++..+...
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~ 162 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 162 (284)
T ss_pred eEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccC
Confidence 89999999999999999664 46899999999999999999999999999999999999999999999999998865321
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhh
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWW 319 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Diw 319 (452)
... ........|+..|+|||++.+..++.++|||
T Consensus 163 ~~~----------------------------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~ 196 (284)
T cd05079 163 KEY----------------------------------------------YTVKDDLDSPVFWYAPECLIQSKFYIASDVW 196 (284)
T ss_pred ccc----------------------------------------------eeecCCCCCCccccCHHHhccCCCCccccch
Confidence 100 0001134577789999999988899999999
Q ss_pred hhhHHHHHhhhCCCCCCCCC--------------hHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC
Q 012988 320 SLGAIMYEMLVGYPPFYADD--------------PITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG 384 (452)
Q Consensus 320 SlGvil~elltG~~Pf~~~~--------------~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~ 384 (452)
||||++|+|+++..|+.... .......... .....+....++..+.+||.+||+ ||.+||
T Consensus 197 slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp--- 271 (284)
T cd05079 197 SFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLE--EGKRLPRPPNCPEEVYQLMRKCWEFQPSKRT--- 271 (284)
T ss_pred hhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHH--cCccCCCCCCCCHHHHHHHHHHccCCcccCc---
Confidence 99999999999877653211 1111111111 112233344688999999999999 999999
Q ss_pred CHHHHhcC
Q 012988 385 GAHQIKAH 392 (452)
Q Consensus 385 ~~~eil~h 392 (452)
++.+++++
T Consensus 272 t~~~il~~ 279 (284)
T cd05079 272 TFQNLIEG 279 (284)
T ss_pred CHHHHHHH
Confidence 89998753
No 350
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.7e-43 Score=311.05 Aligned_cols=263 Identities=29% Similarity=0.419 Sum_probs=213.5
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEE--------
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQ-------- 156 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~-------- 156 (452)
.+.|+-+.+||+|.||.||+|+.+.+|+.||+|++.... .+...-....+|+.+|..++|+|++.+++.+.
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmen-eKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r 94 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMEN-EKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNR 94 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhc-cccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccc
Confidence 355778889999999999999999999999998664321 23344456778999999999999998887663
Q ss_pred cCCeEEEEEeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCcc
Q 012988 157 DTEYLYLIMEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKP 235 (452)
Q Consensus 157 ~~~~~~lV~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~ 235 (452)
+...+|+||.+|. -+|..+|... -.++..+++.++.+++.||.|+|...|+|||+||+|+||+.+|.+||+|||+++.
T Consensus 95 ~r~t~ylVf~~ce-hDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~ 173 (376)
T KOG0669|consen 95 DRATFYLVFDFCE-HDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARA 173 (376)
T ss_pred ccceeeeeHHHhh-hhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccc
Confidence 2346999999995 5888888654 5799999999999999999999999999999999999999999999999999987
Q ss_pred CCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCc
Q 012988 236 LDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGM 314 (452)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~ 314 (452)
+..+... .....+..+-|.+|++||.+.+ ..|+.
T Consensus 174 fs~~~n~---------------------------------------------~kprytnrvvTLwYrppEllLG~r~yg~ 208 (376)
T KOG0669|consen 174 FSTSKNV---------------------------------------------VKPRYTNRVVTLWYRPPELLLGDREYGP 208 (376)
T ss_pred eeccccc---------------------------------------------CCCCcccceeeeecCCHHHhhcccccCC
Confidence 7533211 0111335678999999999987 56899
Q ss_pred cchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcc---------c-----------CCCC-----------CCCC
Q 012988 315 ECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHL---------K-----------FPDD-----------SKLS 363 (452)
Q Consensus 315 ~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~---------~-----------~p~~-----------~~~s 363 (452)
+.|||..|||+.||++|.+.|.+.+....+..|...-+.+ . .|.. -.-+
T Consensus 209 ~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd 288 (376)
T KOG0669|consen 209 PIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKD 288 (376)
T ss_pred cchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCC
Confidence 9999999999999999999999998888877775421111 1 1110 0124
Q ss_pred hhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 364 PEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 364 ~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
+++.||+.+||. ||.+|+ ++.++++|.||..
T Consensus 289 ~~a~dLle~ll~~DP~kR~---~ad~alnh~~F~k 320 (376)
T KOG0669|consen 289 DEALDLLEKLLKLDPTKRI---DADQALNHDFFWK 320 (376)
T ss_pred hhHHHHHHHHhccCcccCc---chHhhhchhhhhc
Confidence 689999999999 999999 9999999999964
No 351
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=4.5e-40 Score=310.86 Aligned_cols=249 Identities=21% Similarity=0.298 Sum_probs=207.3
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
..+|++.+.||.|+||.||+|.+. ++..+|+|++..... ....+.+|+.+++.++||||+++++++.....+|+|
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 77 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAM----SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLV 77 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCC----CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEE
Confidence 468999999999999999999875 467899998865432 234578899999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 165 MEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
|||+++++|.+++... ..+++..+..++.|++.||.|||+.|++||||||+||+++.++.++|+|||++........
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~-- 155 (256)
T cd05112 78 FEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY-- 155 (256)
T ss_pred EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcc--
Confidence 9999999999998764 5689999999999999999999999999999999999999999999999999875421100
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhH
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 323 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGv 323 (452)
.......++..|+|||.+.+..++.++||||||+
T Consensus 156 ----------------------------------------------~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~ 189 (256)
T cd05112 156 ----------------------------------------------TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGV 189 (256)
T ss_pred ----------------------------------------------cccCCCccchhhcCHhHhccCCcChHHHHHHHHH
Confidence 0001223567899999999888999999999999
Q ss_pred HHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcC
Q 012988 324 IMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAH 392 (452)
Q Consensus 324 il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~h 392 (452)
++|+|++ |..||...........+... .....| ...+..+.+|+.+||. +|.+|| ++.+++++
T Consensus 190 ~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~l~~~~l~~~p~~Rp---~~~~~l~~ 254 (256)
T cd05112 190 LMWEVFSEGKTPYENRSNSEVVETINAG-FRLYKP--RLASQSVYELMQHCWKERPEDRP---SFSLLLHQ 254 (256)
T ss_pred HHHHHHcCCCCCCCcCCHHHHHHHHhCC-CCCCCC--CCCCHHHHHHHHHHcccChhhCC---CHHHHHHh
Confidence 9999998 99999887776666665432 111222 3468999999999999 999999 89998763
No 352
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=4.5e-40 Score=310.58 Aligned_cols=248 Identities=27% Similarity=0.390 Sum_probs=209.5
Q ss_pred eeEeceeccCCCeEEEEEEEccCC----CEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEE
Q 012988 88 FELLTIIGRGAFGEVRLCREKKSG----NIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYL 163 (452)
Q Consensus 88 y~i~~~LG~G~~g~V~~a~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~l 163 (452)
+++++.||.|+||.||+|.+..++ ..||+|++..... ......+..|+.+++.++|+||+++++++.+.+..|+
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD--EQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC--hHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEE
Confidence 467889999999999999998766 8999999865422 2245678899999999999999999999999999999
Q ss_pred EEeecCCCChHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 164 IMEYLPGGDMMTLLMREDT--LTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 164 V~E~~~ggsL~~~l~~~~~--~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
||||+++++|.+++..... +++..+..++.|++.||.|||+.|++||||||+||+++.++.++|+|||++........
T Consensus 79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY 158 (258)
T ss_pred EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccc
Confidence 9999999999999976544 99999999999999999999999999999999999999999999999999876532210
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSL 321 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSl 321 (452)
.. .....+++.|+|||.+.+..++.++|||||
T Consensus 159 ~~------------------------------------------------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~sl 190 (258)
T smart00219 159 YK------------------------------------------------KKGGKLPIRWMAPESLKDGKFTSKSDVWSF 190 (258)
T ss_pred cc------------------------------------------------cccCCCcccccChHHhccCCCCcchhHHHH
Confidence 00 001226789999999988889999999999
Q ss_pred hHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 322 GAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 322 Gvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
|+++|+|++ |.+||...+.......+.... ....+ ..++.++.++|.+||. ||.+|| ++.++++
T Consensus 191 G~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~i~~~l~~~p~~Rp---t~~~ll~ 256 (258)
T smart00219 191 GVLLWEIFTLGESPYPGMSNEEVLEYLKKGY-RLPKP--ENCPPEIYKLMLQCWAEDPEDRP---TFSELVE 256 (258)
T ss_pred HHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC-CCCCC--CcCCHHHHHHHHHHCcCChhhCc---CHHHHHh
Confidence 999999998 899998877777776665532 22223 3588999999999999 999999 8999875
No 353
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=5.2e-40 Score=309.48 Aligned_cols=244 Identities=25% Similarity=0.347 Sum_probs=202.9
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeecCCC
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGG 171 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~gg 171 (452)
++||+|+||.||+|.+.. ++.||+|++...... .....+.+|+.+++.++|+||+++++++.+....++||||++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 77 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP--DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGG 77 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence 469999999999999877 999999988654322 34567889999999999999999999999999999999999999
Q ss_pred ChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcccccc
Q 012988 172 DMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTI 250 (452)
Q Consensus 172 sL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~ 250 (452)
+|.+++.. ...++...+..++.+++.||.|||++||+||||||+|||++.++.++|+|||++.........
T Consensus 78 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~-------- 149 (251)
T cd05041 78 SLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYT-------- 149 (251)
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcce--------
Confidence 99999865 356889999999999999999999999999999999999999999999999998754311000
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhh
Q 012988 251 DDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 330 (452)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ellt 330 (452)
.......++..|+|||++.+..++.++|||||||++|+|++
T Consensus 150 ---------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t 190 (251)
T cd05041 150 ---------------------------------------VSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFS 190 (251)
T ss_pred ---------------------------------------eccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHh
Confidence 00001234567999999988889999999999999999999
Q ss_pred -CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 331 -GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 331 -G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
|..||...........+.. ....+....++.++.++|.+||. +|.+|| ++.++++
T Consensus 191 ~~~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~ell~ 247 (251)
T cd05041 191 LGDTPYPGMSNQQTRERIES---GYRMPAPQLCPEEIYRLMLQCWAYDPENRP---SFSEIYN 247 (251)
T ss_pred ccCCCCccCCHHHHHHHHhc---CCCCCCCccCCHHHHHHHHHHhccChhhCc---CHHHHHH
Confidence 8999988776665555543 12223334678999999999998 999999 8999875
No 354
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=5.1e-40 Score=313.19 Aligned_cols=252 Identities=25% Similarity=0.355 Sum_probs=206.2
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEccC---CCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREKKS---GNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE 159 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~ 159 (452)
+..++|.+.+.||+|+||.||+|.+... ...||+|...... .....+.+.+|+.+++.++||||+++++++.+ .
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~ 79 (270)
T cd05056 3 IQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT--SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-N 79 (270)
T ss_pred echhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-C
Confidence 3456799999999999999999987644 3568999876442 12345678899999999999999999999876 4
Q ss_pred eEEEEEeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCC
Q 012988 160 YLYLIMEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDC 238 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~ 238 (452)
..|+||||+++|+|.+++... ..+++..+..++.|++.||.|||+.|++||||||+|||++.++.++|+|||+++....
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 80 PVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLED 159 (270)
T ss_pred CcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeeccc
Confidence 578999999999999999764 3589999999999999999999999999999999999999999999999999876532
Q ss_pred CcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchh
Q 012988 239 STLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDW 318 (452)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Di 318 (452)
.... ......+++.|+|||.+....++.++||
T Consensus 160 ~~~~------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di 191 (270)
T cd05056 160 ESYY------------------------------------------------KASKGKLPIKWMAPESINFRRFTSASDV 191 (270)
T ss_pred ccce------------------------------------------------ecCCCCccccccChhhhccCCCCchhhh
Confidence 1100 0011234568999999988889999999
Q ss_pred hhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 319 WSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 319 wSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
||||+++|+|++ |..||.+.+..+....+... ..+.. ...++..+.++|.+|+. +|.+|| ++.+++.
T Consensus 192 ~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~li~~~l~~~P~~Rp---t~~~~~~ 260 (270)
T cd05056 192 WMFGVCMWEILMLGVKPFQGVKNNDVIGRIENG-ERLPM--PPNCPPTLYSLMTKCWAYDPSKRP---RFTELKA 260 (270)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-CcCCC--CCCCCHHHHHHHHHHcCCChhhCc---CHHHHHH
Confidence 999999999986 99999888776666555432 22233 34688999999999998 999999 8888775
No 355
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=6.7e-40 Score=314.75 Aligned_cols=252 Identities=25% Similarity=0.423 Sum_probs=199.5
Q ss_pred CCeeEeceeccCCCeEEEEEEE----ccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEc--CC
Q 012988 86 DDFELLTIIGRGAFGEVRLCRE----KKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQD--TE 159 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~--~~ 159 (452)
.+|++++.||+|+||.||+|.. ..++..||+|++.... ......+.+|+.+++.++||||+++++++.. ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST---AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCC
Confidence 5799999999999999999974 4578899999986542 2345678899999999999999999988643 45
Q ss_pred eEEEEEeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCC
Q 012988 160 YLYLIMEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDC 238 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~ 238 (452)
.+++||||+++|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++..+..
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~ 160 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQ 160 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccC
Confidence 789999999999999999664 4689999999999999999999999999999999999999999999999999886532
Q ss_pred CcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchh
Q 012988 239 STLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDW 318 (452)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Di 318 (452)
..... .......++..|+|||++.+..++.++||
T Consensus 161 ~~~~~----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di 194 (284)
T cd05081 161 DKEYY----------------------------------------------KVREPGESPIFWYAPESLTESKFSVASDV 194 (284)
T ss_pred CCcce----------------------------------------------eecCCCCCceEeeCHHHhccCCcChHHHH
Confidence 11000 00001124456999999998889999999
Q ss_pred hhhhHHHHHhhhCCCCCCCCChHH---------------HHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCC
Q 012988 319 WSLGAIMYEMLVGYPPFYADDPIT---------------TCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLG 382 (452)
Q Consensus 319 wSlGvil~elltG~~Pf~~~~~~~---------------~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~ 382 (452)
|||||++|||++|..|+....... .+..+.. ....++....++.++.+||.+||. +|.+||
T Consensus 195 ~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp- 271 (284)
T cd05081 195 WSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLK--NNGRLPAPPGCPAEIYAIMKECWNNDPSQRP- 271 (284)
T ss_pred HHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHh--cCCcCCCCCCCCHHHHHHHHHHccCChhhCC-
Confidence 999999999999987764332110 0111111 112233344688999999999999 999999
Q ss_pred CCCHHHHhc
Q 012988 383 TGGAHQIKA 391 (452)
Q Consensus 383 ~~~~~eil~ 391 (452)
++.+|++
T Consensus 272 --t~~ei~~ 278 (284)
T cd05081 272 --SFSELAL 278 (284)
T ss_pred --CHHHHHH
Confidence 8998875
No 356
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=3.8e-40 Score=319.80 Aligned_cols=253 Identities=18% Similarity=0.287 Sum_probs=204.4
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCC----EEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGN----IYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE 159 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~ 159 (452)
..++|++++.||+|+||.||+|.+..+|. .||+|++.... .......+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~- 81 (303)
T cd05110 5 KETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP- 81 (303)
T ss_pred chhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-
Confidence 45789999999999999999999887776 46888775432 122234578899999999999999999998764
Q ss_pred eEEEEEeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCC
Q 012988 160 YLYLIMEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDC 238 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~ 238 (452)
..++|+||+++|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.+..
T Consensus 82 ~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 82 TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161 (303)
T ss_pred CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccC
Confidence 467999999999999998764 3689999999999999999999999999999999999999999999999999986531
Q ss_pred CcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchh
Q 012988 239 STLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDW 318 (452)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Di 318 (452)
... ........++..|+|||++.+..++.++||
T Consensus 162 ~~~-----------------------------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di 194 (303)
T cd05110 162 DEK-----------------------------------------------EYNADGGKMPIKWMALECIHYRKFTHQSDV 194 (303)
T ss_pred ccc-----------------------------------------------ccccCCCccccccCCHHHhccCCCChHHHH
Confidence 110 000112346778999999998899999999
Q ss_pred hhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcC
Q 012988 319 WSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAH 392 (452)
Q Consensus 319 wSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~h 392 (452)
|||||++|||++ |..||.+.........+ ..... .+....++..+.++|.+|+. +|.+|| ++.+++..
T Consensus 195 wslG~~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~li~~c~~~~p~~Rp---~~~~l~~~ 264 (303)
T cd05110 195 WSYGVTIWELMTFGGKPYDGIPTREIPDLL-EKGER--LPQPPICTIDVYMVMVKCWMIDADSRP---KFKELAAE 264 (303)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HCCCC--CCCCCCCCHHHHHHHHHHcCCChhhCc---CHHHHHHH
Confidence 999999999997 99999876655444333 32222 33334678999999999998 999999 88888764
No 357
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.5e-40 Score=314.95 Aligned_cols=237 Identities=19% Similarity=0.283 Sum_probs=192.2
Q ss_pred ceeccCCCeEEEEEEEccCCCE-------EEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 92 TIIGRGAFGEVRLCREKKSGNI-------YAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~-------vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
+.||.|+||.||+|.++.++.. +|+|.+.... ....+.+..|+.+++.++||||+++++++......++|
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 77 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH---RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV 77 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh---HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence 3689999999999998665443 8888775432 23345678899999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCc--------EEEeeccCCcc
Q 012988 165 MEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGH--------MKLSDFGLCKP 235 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~--------ikl~DFGla~~ 235 (452)
|||+++|+|..++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++. ++++|||++..
T Consensus 78 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~ 157 (258)
T cd05078 78 QEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT 157 (258)
T ss_pred EecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence 9999999999999764 45899999999999999999999999999999999999988775 68999998764
Q ss_pred CCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCc
Q 012988 236 LDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGM 314 (452)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~ 314 (452)
.... ....|++.|+|||++.+ ..++.
T Consensus 158 ~~~~-----------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~ 184 (258)
T cd05078 158 VLPK-----------------------------------------------------EILLERIPWVPPECIENPQNLSL 184 (258)
T ss_pred cCCc-----------------------------------------------------hhccccCCccCchhccCCCCCCc
Confidence 3210 12457889999999987 45799
Q ss_pred cchhhhhhHHHHHhhhCC-CCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcC
Q 012988 315 ECDWWSLGAIMYEMLVGY-PPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAH 392 (452)
Q Consensus 315 ~~DiwSlGvil~elltG~-~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~h 392 (452)
++|||||||++|+|++|. +||...+...... +.. ....+|. ..+.++.+||.+||+ ||.+|| ++.+|++.
T Consensus 185 ~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~-~~~--~~~~~~~--~~~~~~~~li~~~l~~~p~~Rp---s~~~il~~ 256 (258)
T cd05078 185 AADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ-FYE--DRHQLPA--PKWTELANLINQCMDYEPDFRP---SFRAIIRD 256 (258)
T ss_pred hhhHHHHHHHHHHHHcCCCCChhhccHHHHHH-HHH--ccccCCC--CCcHHHHHHHHHHhccChhhCC---CHHHHHHh
Confidence 999999999999999984 6666555443322 222 2334443 456889999999999 999999 89998853
No 358
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.1e-39 Score=307.06 Aligned_cols=243 Identities=24% Similarity=0.362 Sum_probs=200.5
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeecCCC
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGG 171 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~gg 171 (452)
+.||+|+||.||+|.. .++..||+|++.... .......+.+|+.+++.++||||+++++++...+..++||||++++
T Consensus 1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 77 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDL--PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGG 77 (250)
T ss_pred CccCCCCCceEEEEEe-cCCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCC
Confidence 3689999999999985 468899999886542 1223346788999999999999999999999999999999999999
Q ss_pred ChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcccccc
Q 012988 172 DMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTI 250 (452)
Q Consensus 172 sL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~ 250 (452)
+|.+++... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++.........
T Consensus 78 ~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~-------- 149 (250)
T cd05085 78 DFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYS-------- 149 (250)
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccc--------
Confidence 999998653 46889999999999999999999999999999999999999999999999998754211100
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhh
Q 012988 251 DDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 330 (452)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ellt 330 (452)
......+++.|+|||++.+..++.++||||||+++|+|++
T Consensus 150 ----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~ 189 (250)
T cd05085 150 ----------------------------------------SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFS 189 (250)
T ss_pred ----------------------------------------cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhc
Confidence 0001234567999999998889999999999999999998
Q ss_pred -CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 331 -GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 331 -G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
|..||.+.........+... .....+ ..++..+.+||.+||. +|.+|| ++.++++
T Consensus 190 ~g~~p~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~li~~~l~~~p~~Rp---~~~~l~~ 246 (250)
T cd05085 190 LGVCPYPGMTNQQAREQVEKG-YRMSCP--QKCPDDVYKVMQRCWDYKPENRP---KFSELQK 246 (250)
T ss_pred CCCCCCCCCCHHHHHHHHHcC-CCCCCC--CCCCHHHHHHHHHHcccCcccCC---CHHHHHH
Confidence 99999887776666555432 222333 3688999999999999 999999 8888865
No 359
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-40 Score=325.83 Aligned_cols=202 Identities=27% Similarity=0.375 Sum_probs=173.7
Q ss_pred CCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC-e
Q 012988 82 KICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE-Y 160 (452)
Q Consensus 82 ~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~-~ 160 (452)
...+++|.--..||+|+||.||+|.... |..||||++....... ...+.+|+.++..++|||+|+|+|||.+.+ .
T Consensus 71 ~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~ 146 (361)
T KOG1187|consen 71 RKATNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLGYCLEGGEH 146 (361)
T ss_pred HHHHhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEEEEecCCce
Confidence 3345788888999999999999998654 4899999876543211 345999999999999999999999999988 5
Q ss_pred EEEEEeecCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCCCcEEECCCCcEEEeeccCCcc
Q 012988 161 LYLIMEYLPGGDMMTLLMRED--TLTENVARFYIAQSVLAIESIHKHN---YIHRDIKPDNLLLDKNGHMKLSDFGLCKP 235 (452)
Q Consensus 161 ~~lV~E~~~ggsL~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikl~DFGla~~ 235 (452)
.+||+|||++|+|.++|.... .+++.....|+.+++.||+|||... ||||||||+|||+|+++++||+|||+|+.
T Consensus 147 ~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~ 226 (361)
T KOG1187|consen 147 RLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKL 226 (361)
T ss_pred EEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCccc
Confidence 999999999999999997754 8899999999999999999999853 99999999999999999999999999975
Q ss_pred CCC-CcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhcccccccc-ccCCccccchhccCCCCC
Q 012988 236 LDC-STLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFST-VGTPDYIAPEVLLKKGYG 313 (452)
Q Consensus 236 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gt~~y~APE~~~~~~~~ 313 (452)
... .. ...+. .||.+|+|||++..+..+
T Consensus 227 ~~~~~~--------------------------------------------------~~~~~~~gt~gY~~PEy~~~g~lt 256 (361)
T KOG1187|consen 227 GPEGDT--------------------------------------------------SVSTTVMGTFGYLAPEYASTGKLT 256 (361)
T ss_pred CCcccc--------------------------------------------------ceeeecCCCCccCChhhhccCCcC
Confidence 431 10 00011 799999999999998999
Q ss_pred ccchhhhhhHHHHHhhhCCCCCCC
Q 012988 314 MECDWWSLGAIMYEMLVGYPPFYA 337 (452)
Q Consensus 314 ~~~DiwSlGvil~elltG~~Pf~~ 337 (452)
.++|||||||+|.||+||+.|...
T Consensus 257 ~KsDVySFGVvllElitgr~~~d~ 280 (361)
T KOG1187|consen 257 EKSDVYSFGVVLLELITGRKAVDQ 280 (361)
T ss_pred cccccccchHHHHHHHhCCcccCC
Confidence 999999999999999999988864
No 360
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=7.5e-40 Score=309.21 Aligned_cols=242 Identities=20% Similarity=0.347 Sum_probs=202.1
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEE
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYL 163 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~l 163 (452)
..++|++.+.||+|+||.||++. .+++.||+|++.... ....+.+|+.+++.++||||+++++++.... .|+
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~ 75 (254)
T cd05083 4 NLQKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV-----TAQAFLEETAVMTKLHHKNLVRLLGVILHNG-LYI 75 (254)
T ss_pred cHHHceeeeeeccCCCCceEecc--cCCCceEEEeecCcc-----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCC-cEE
Confidence 45679999999999999999875 568899999885432 2356888999999999999999999987654 799
Q ss_pred EEeecCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 164 IMEYLPGGDMMTLLMRED--TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 164 V~E~~~ggsL~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
||||+++++|.+++.... .+++..+..++.|++.||.|||+.|++||||||+|||++.++.+||+|||++.......
T Consensus 76 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~- 154 (254)
T cd05083 76 VMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV- 154 (254)
T ss_pred EEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccC-
Confidence 999999999999997643 57899999999999999999999999999999999999999999999999987532110
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSL 321 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSl 321 (452)
....++..|+|||++.+..++.++|+|||
T Consensus 155 ---------------------------------------------------~~~~~~~~y~~pe~~~~~~~~~~~Dv~sl 183 (254)
T cd05083 155 ---------------------------------------------------DNSKLPVKWTAPEALKHKKFSSKSDVWSY 183 (254)
T ss_pred ---------------------------------------------------CCCCCCceecCHHHhccCCcCchhhHHHH
Confidence 01224567999999988899999999999
Q ss_pred hHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 322 GAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 322 Gvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
||++|+|++ |.+||...+..+....+... ...+....++..+.+||.+||. +|..|| ++.+++.
T Consensus 184 G~~l~el~~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~l~~ 249 (254)
T cd05083 184 GVLLWEVFSYGRAPYPKMSLKEVKECVEKG---YRMEPPEGCPADVYVLMTSCWETEPKKRP---SFHKLRE 249 (254)
T ss_pred HHHHHHHHhCCCCCCccCCHHHHHHHHhCC---CCCCCCCcCCHHHHHHHHHHcCCChhhCc---CHHHHHH
Confidence 999999997 99999888777666555432 2222234688999999999998 999999 8888764
No 361
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=9.4e-40 Score=311.21 Aligned_cols=247 Identities=21% Similarity=0.293 Sum_probs=192.4
Q ss_pred ceeccCCCeEEEEEEEcc--CCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeecC
Q 012988 92 TIIGRGAFGEVRLCREKK--SGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLP 169 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~ 169 (452)
+.||+|+||+||+|.... ....+|+|.+.... .......+.+|+.+++.++||||+++++.+.+...+|+||||++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCP 78 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCC
Confidence 468999999999996533 34578888765432 22234567789999999999999999999999999999999999
Q ss_pred CCChHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 170 GGDMMTLLMRED-----TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 170 ggsL~~~l~~~~-----~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
+|+|.+++.... ..++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.........
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~-- 156 (269)
T cd05042 79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYY-- 156 (269)
T ss_pred CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchhe--
Confidence 999999996643 2467788899999999999999999999999999999999999999999998653211000
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-------CCCCccch
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-------KGYGMECD 317 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-------~~~~~~~D 317 (452)
.......+++.|+|||++.. ..++.++|
T Consensus 157 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~D 191 (269)
T cd05042 157 ---------------------------------------------ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSN 191 (269)
T ss_pred ---------------------------------------------eccCCCCCcccccCHHHHhhccccccccccchhhH
Confidence 00112346778999999743 45688999
Q ss_pred hhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCC---CCCCChhHHHHHHHhhcCccccCCCCCHHHHhc
Q 012988 318 WWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPD---DSKLSPEAKDLICRLLCDVEHRLGTGGAHQIKA 391 (452)
Q Consensus 318 iwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~---~~~~s~~~~dLi~~mL~dp~~R~~~~~~~eil~ 391 (452)
||||||++|+|++ |..||....+.+....+... ....++. ...++....+++..|+.||.+|| ++.+|++
T Consensus 192 iwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~dp~~Rp---t~~~v~~ 265 (269)
T cd05042 192 IWSLGVTMWELFTAADQPYPDLSDEQVLKQVVRE-QDIKLPKPQLDLKYSDRWYEVMQFCWLDPETRP---TAEEVHE 265 (269)
T ss_pred HHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhc-cCccCCCCcccccCCHHHHHHHHHHhcCccccc---CHHHHHH
Confidence 9999999999999 88899877766665555432 2222222 23577888999988877999999 7777764
No 362
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-41 Score=308.12 Aligned_cols=268 Identities=29% Similarity=0.469 Sum_probs=223.4
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC-----
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE----- 159 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~----- 159 (452)
..+|.-++.+|.|+- .|..|-+.-.++.||+|++... ........+..+|..++..++|+||++++.+|.-..
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p-f~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP-FQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCc-cccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence 467888999999998 8888889999999999988665 444445677889999999999999999999996433
Q ss_pred -eEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCC
Q 012988 160 -YLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDC 238 (452)
Q Consensus 160 -~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~ 238 (452)
.+|+|||+| .++|...+. -.++-..+++++.|++.|+.|||+.||+||||||+||++..++.+||.|||+|+..+.
T Consensus 94 ~e~y~v~e~m-~~nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~ 170 (369)
T KOG0665|consen 94 QEVYLVMELM-DANLCQVIL--MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDT 170 (369)
T ss_pred HhHHHHHHhh-hhHHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCc
Confidence 589999999 678998886 4578889999999999999999999999999999999999999999999999986531
Q ss_pred CcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchh
Q 012988 239 STLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDW 318 (452)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Di 318 (452)
. -..+..+.|..|.|||++.+.+|...+||
T Consensus 171 ~--------------------------------------------------~~mtpyVvtRyyrapevil~~~~ke~vdi 200 (369)
T KOG0665|consen 171 D--------------------------------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDI 200 (369)
T ss_pred c--------------------------------------------------cccCchhheeeccCchheeccCCcccchh
Confidence 1 12346789999999999999999999999
Q ss_pred hhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCc-----------------------------ccCCCC---------C
Q 012988 319 WSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNH-----------------------------LKFPDD---------S 360 (452)
Q Consensus 319 wSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~-----------------------------~~~p~~---------~ 360 (452)
||+||++.||++|...|.|.+..+.+.++...-+. -.+|+. .
T Consensus 201 wSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~ 280 (369)
T KOG0665|consen 201 WSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSK 280 (369)
T ss_pred hhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCc
Confidence 99999999999999999999888888777651110 011111 1
Q ss_pred CCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCCCccccccCCCCccc
Q 012988 361 KLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDVVWDKLYEMEAAFKP 412 (452)
Q Consensus 361 ~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~~~~~l~~~~~~~~p 412 (452)
.-+..++||+.+||. ||++|. +++++|.||||+ .|-.-.+.+.|..|
T Consensus 281 ~~~~~ardll~~MLvi~pe~Ri---sv~daL~HPY~~--vw~~~~ev~ap~pe 328 (369)
T KOG0665|consen 281 LDCSLARDLLSKMLVIDPEKRI---SVDDALRHPYIK--VWYDPDEVEAPPPE 328 (369)
T ss_pred cchHHHHHHHHHhhccChhhcc---cHHHHhcCCeee--eecccccccCCCCc
Confidence 124678999999998 999999 999999999999 78666666666655
No 363
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=8.6e-40 Score=310.64 Aligned_cols=237 Identities=21% Similarity=0.244 Sum_probs=190.2
Q ss_pred ceeccCCCeEEEEEEEccC------------CCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC
Q 012988 92 TIIGRGAFGEVRLCREKKS------------GNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE 159 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~------------~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~ 159 (452)
+.||+|+||.||+|..... ...+|+|++.... ......+..|+.+++.++||||+++++++.+..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~ 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH---RDISLAFFETASMMRQVSHKHIVLLYGVCVRDV 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh---hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 3689999999999985322 2358888875432 233456778899999999999999999999999
Q ss_pred eEEEEEeecCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCc-------EEEeecc
Q 012988 160 YLYLIMEYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGH-------MKLSDFG 231 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~-------ikl~DFG 231 (452)
..++||||+++|+|..++.. ...+++..+..++.|++.||.|||++||+||||||+|||++.++. ++++|||
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g 157 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPG 157 (262)
T ss_pred CCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence 99999999999999988865 357899999999999999999999999999999999999987764 8999999
Q ss_pred CCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhcc-CC
Q 012988 232 LCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLL-KK 310 (452)
Q Consensus 232 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~-~~ 310 (452)
++...... ....|+..|+|||.+. +.
T Consensus 158 ~~~~~~~~-----------------------------------------------------~~~~~~~~y~aPE~~~~~~ 184 (262)
T cd05077 158 IPITVLSR-----------------------------------------------------QECVERIPWIAPECVEDSK 184 (262)
T ss_pred CCccccCc-----------------------------------------------------ccccccccccChhhhcCCC
Confidence 98654210 1245788999999987 46
Q ss_pred CCCccchhhhhhHHHHHhh-hCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHH
Q 012988 311 GYGMECDWWSLGAIMYEML-VGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQ 388 (452)
Q Consensus 311 ~~~~~~DiwSlGvil~ell-tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~e 388 (452)
.++.++|||||||++|+|+ +|..||......+.. .... ..... ....++++.+||.+||. ||.+|| ++.+
T Consensus 185 ~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-~~~~--~~~~~--~~~~~~~~~~li~~cl~~dp~~Rp---~~~~ 256 (262)
T cd05077 185 NLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-RFYE--GQCML--VTPSCKELADLMTHCMNYDPNQRP---FFRA 256 (262)
T ss_pred CCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHh--cCccC--CCCChHHHHHHHHHHcCCChhhCc---CHHH
Confidence 7899999999999999998 588888765543332 2222 11121 12346889999999999 999999 9999
Q ss_pred HhcC
Q 012988 389 IKAH 392 (452)
Q Consensus 389 il~h 392 (452)
|+.+
T Consensus 257 il~~ 260 (262)
T cd05077 257 IMRD 260 (262)
T ss_pred HHHh
Confidence 9864
No 364
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.3e-39 Score=310.26 Aligned_cols=247 Identities=22% Similarity=0.268 Sum_probs=192.9
Q ss_pred ceeccCCCeEEEEEEEc--cCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeecC
Q 012988 92 TIIGRGAFGEVRLCREK--KSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLP 169 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~ 169 (452)
+.||+|+||.||+|... .++..+|+|.+..... ......+.+|+.+++.++||||+++++++.+...+++||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS--VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCP 78 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCC
Confidence 46899999999999864 3556799998865431 2223467889999999999999999999999999999999999
Q ss_pred CCChHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhh
Q 012988 170 GGDMMTLLMRED-----TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAI 244 (452)
Q Consensus 170 ggsL~~~l~~~~-----~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~ 244 (452)
+|+|.+++.... ..+...++.++.|++.||.|||+.||+||||||+||+++.++++||+|||+++.......
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~--- 155 (269)
T cd05087 79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY--- 155 (269)
T ss_pred CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcce---
Confidence 999999986532 356677888999999999999999999999999999999999999999999864321100
Q ss_pred ccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC-------CCCccch
Q 012988 245 HEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK-------GYGMECD 317 (452)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~-------~~~~~~D 317 (452)
........|++.|+|||++.+. .++.++|
T Consensus 156 --------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~D 191 (269)
T cd05087 156 --------------------------------------------YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESN 191 (269)
T ss_pred --------------------------------------------eecCCCcCCcccccCHhHhccccccccccCCCccch
Confidence 0001134578899999998642 3578999
Q ss_pred hhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCC---CCCChhHHHHHHHhhcCccccCCCCCHHHHhc
Q 012988 318 WWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDD---SKLSPEAKDLICRLLCDVEHRLGTGGAHQIKA 391 (452)
Q Consensus 318 iwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~---~~~s~~~~dLi~~mL~dp~~R~~~~~~~eil~ 391 (452)
|||||+++|+|++ |..||......+........ ....++.+ ...+..+.+++.+|+.+|.+|| ++.+|+.
T Consensus 192 iwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~c~~~P~~Rp---t~~~l~~ 265 (269)
T cd05087 192 VWSLGVTIWELFELGSQPYRHLSDEQVLTYTVRE-QQLKLPKPRLKLPLSDRWYEVMQFCWLQPEQRP---SAEEVHL 265 (269)
T ss_pred hHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhc-ccCCCCCCccCCCCChHHHHHHHHHhcCcccCC---CHHHHHH
Confidence 9999999999996 99999876665554433321 12222221 2467889999999987999999 8888763
No 365
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2e-39 Score=308.87 Aligned_cols=251 Identities=29% Similarity=0.531 Sum_probs=206.4
Q ss_pred CeeEeceeccCCCeEEEEEEEcc-CCCEEEEEEeecchh-------cccchHHHHHHHHHHHHH-hCCCceeeEEEEEEc
Q 012988 87 DFELLTIIGRGAFGEVRLCREKK-SGNIYAMKKLKKSEM-------VKRGQVEHVRAERNLLAE-VASHCIVKLYYSFQD 157 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~-~~~~vavK~~~~~~~-------~~~~~~~~~~~E~~il~~-l~hp~iv~l~~~~~~ 157 (452)
+|++.+.||+|+||.||+|.+.. +++.+|+|.+..... ........+..|+.++.. ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48899999999999999999987 688999998864321 122234556778887765 799999999999999
Q ss_pred CCeEEEEEeecCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCCCcEEECCCCcEEEeeccC
Q 012988 158 TEYLYLIMEYLPGGDMMTLLMR----EDTLTENVARFYIAQSVLAIESIHK-HNYIHRDIKPDNLLLDKNGHMKLSDFGL 232 (452)
Q Consensus 158 ~~~~~lV~E~~~ggsL~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~-~givHrDlkp~NILl~~~g~ikl~DFGl 232 (452)
.+..|+||||++|++|.+++.. ...+++..+..++.|++.||.|||+ .||+|+||+|+|||++.++.++|+|||+
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence 9999999999999999988743 3568999999999999999999996 7899999999999999999999999999
Q ss_pred CccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCC
Q 012988 233 CKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGY 312 (452)
Q Consensus 233 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 312 (452)
+....... ......|+..|+|||++.+..+
T Consensus 161 ~~~~~~~~--------------------------------------------------~~~~~~~~~~~~~Pe~~~~~~~ 190 (269)
T cd08528 161 AKQKQPES--------------------------------------------------KLTSVVGTILYSCPEIVKNEPY 190 (269)
T ss_pred eeeccccc--------------------------------------------------ccccccCcccCcChhhhcCCCC
Confidence 87643110 0113468899999999998889
Q ss_pred CccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 313 GMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 313 ~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
+.++|+||||+++|+|++|..||...+.......+...... ..+ ...+++.+.+||.+||. ||.+|| ++.++..
T Consensus 191 ~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~l~~li~~cl~~~p~~Rp---~~~e~~~ 265 (269)
T cd08528 191 GEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYE-PLP-EGMYSEDVTDVITSCLTPDAEARP---DIIQVSA 265 (269)
T ss_pred chHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCC-cCC-cccCCHHHHHHHHHHCCCCCccCC---CHHHHHH
Confidence 99999999999999999999999887776666555542211 111 22578999999999998 999999 8888765
Q ss_pred C
Q 012988 392 H 392 (452)
Q Consensus 392 h 392 (452)
+
T Consensus 266 ~ 266 (269)
T cd08528 266 M 266 (269)
T ss_pred H
Confidence 3
No 366
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.2e-39 Score=311.79 Aligned_cols=236 Identities=19% Similarity=0.233 Sum_probs=190.2
Q ss_pred eeccCCCeEEEEEEEccC------------------------CCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCce
Q 012988 93 IIGRGAFGEVRLCREKKS------------------------GNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCI 148 (452)
Q Consensus 93 ~LG~G~~g~V~~a~~~~~------------------------~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i 148 (452)
.||+|+||.||+|....+ ...||+|++.... ......+.+|+.+++.++||||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~ni 78 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH---RDIALAFFETASLMSQVSHIHL 78 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH---HHHHHHHHHHHHHHhcCCCCCe
Confidence 699999999999975322 2358888886432 2234567788999999999999
Q ss_pred eeEEEEEEcCCeEEEEEeecCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCC----
Q 012988 149 VKLYYSFQDTEYLYLIMEYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNG---- 223 (452)
Q Consensus 149 v~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g---- 223 (452)
+++++++.+....|+||||+++|+|..++.. .+.+++..+..++.|++.||+|||++||+||||||+|||++..+
T Consensus 79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~ 158 (274)
T cd05076 79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEG 158 (274)
T ss_pred eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccC
Confidence 9999999999999999999999999999865 46789999999999999999999999999999999999998654
Q ss_pred ---cEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCc
Q 012988 224 ---HMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPD 300 (452)
Q Consensus 224 ---~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~ 300 (452)
.+||+|||++...... ....|+..
T Consensus 159 ~~~~~kl~d~g~~~~~~~~-----------------------------------------------------~~~~~~~~ 185 (274)
T cd05076 159 TSPFIKLSDPGVSFTALSR-----------------------------------------------------EERVERIP 185 (274)
T ss_pred ccceeeecCCccccccccc-----------------------------------------------------cccccCCc
Confidence 3899999987643100 12347788
Q ss_pred cccchhccC-CCCCccchhhhhhHHHHHhh-hCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-Cc
Q 012988 301 YIAPEVLLK-KGYGMECDWWSLGAIMYEML-VGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DV 377 (452)
Q Consensus 301 y~APE~~~~-~~~~~~~DiwSlGvil~ell-tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp 377 (452)
|+|||.+.+ ..++.++|||||||++|||+ +|..||......+.... .. ....+|. ..++.+.++|.+||+ +|
T Consensus 186 ~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~--~~~~~~~--~~~~~~~~li~~cl~~~p 260 (274)
T cd05076 186 WIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERF-YE--KKHRLPE--PSCKELATLISQCLTYEP 260 (274)
T ss_pred ccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHH-HH--hccCCCC--CCChHHHHHHHHHcccCh
Confidence 999998875 56899999999999999985 79999987765544332 22 1222332 356789999999999 99
Q ss_pred cccCCCCCHHHHhcC
Q 012988 378 EHRLGTGGAHQIKAH 392 (452)
Q Consensus 378 ~~R~~~~~~~eil~h 392 (452)
.+|| ++.+|+++
T Consensus 261 ~~Rp---s~~~il~~ 272 (274)
T cd05076 261 TQRP---SFRTILRD 272 (274)
T ss_pred hhCc---CHHHHHHh
Confidence 9999 99999864
No 367
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2e-39 Score=307.43 Aligned_cols=247 Identities=19% Similarity=0.299 Sum_probs=195.1
Q ss_pred ceeccCCCeEEEEEEEcc---CCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEE-cCCeEEEEEee
Q 012988 92 TIIGRGAFGEVRLCREKK---SGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQ-DTEYLYLIMEY 167 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~-~~~~~~lV~E~ 167 (452)
+.||+|+||.||+|.+.. .+..||+|.+.... .......+.+|+.+++.++||||+++++++. .++..++||||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT--DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC--CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence 368999999999998754 34579999875321 2233567788999999999999999999765 55678999999
Q ss_pred cCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcc
Q 012988 168 LPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHE 246 (452)
Q Consensus 168 ~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~ 246 (452)
+.+|+|.+++... ...+...+..++.|++.||.|||+.||+||||||+|||++.++.+||+|||+++.........
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~--- 155 (262)
T cd05058 79 MKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS--- 155 (262)
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCccee---
Confidence 9999999999764 456777788899999999999999999999999999999999999999999987543111000
Q ss_pred ccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHH
Q 012988 247 HKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 326 (452)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ 326 (452)
........+++.|+|||.+.+..++.++|||||||++|
T Consensus 156 ------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 193 (262)
T cd05058 156 ------------------------------------------VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 193 (262)
T ss_pred ------------------------------------------ecccccCcCCccccChhHhccCccchHHHHHHHHHHHH
Confidence 00011234677899999998889999999999999999
Q ss_pred Hhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 327 EMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 327 ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
||++ |.+||...+.......+..+ .....+ ..+++.+.+++.+||. +|.+|| ++.+++.
T Consensus 194 el~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~li~~cl~~~p~~Rp---~~~~il~ 254 (262)
T cd05058 194 ELMTRGAPPYPDVDSFDITVYLLQG-RRLLQP--EYCPDPLYEVMLSCWHPKPEMRP---TFSELVS 254 (262)
T ss_pred HHHcCCCCCCCCCCHHHHHHHHhcC-CCCCCC--CcCCHHHHHHHHHHcCCChhhCC---CHHHHHH
Confidence 9999 56677776666655555442 222222 3578999999999999 999999 8888875
No 368
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.1e-39 Score=310.54 Aligned_cols=245 Identities=26% Similarity=0.379 Sum_probs=200.1
Q ss_pred ceeccCCCeEEEEEEEccCC------CEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 92 TIIGRGAFGEVRLCREKKSG------NIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
+.||+|+||.||+|+.+..+ ..+|+|.+.+.. .......+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA--TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc--chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEE
Confidence 36899999999999986543 689999876542 1233456788999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCC-----cEEEeeccCC
Q 012988 166 EYLPGGDMMTLLMRE-------DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNG-----HMKLSDFGLC 233 (452)
Q Consensus 166 E~~~ggsL~~~l~~~-------~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g-----~ikl~DFGla 233 (452)
||+++|+|.+++... ..+++..+..++.|++.||.|||+.|++|+||||+|||++.++ .++|+|||++
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 999999999999642 3477888999999999999999999999999999999999887 8999999998
Q ss_pred ccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCC
Q 012988 234 KPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYG 313 (452)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 313 (452)
+........ .......++..|+|||++.+..++
T Consensus 159 ~~~~~~~~~-----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~ 191 (269)
T cd05044 159 RDIYKSDYY-----------------------------------------------RKEGEGLLPVRWMAPESLLDGKFT 191 (269)
T ss_pred ccccccccc-----------------------------------------------ccCcccCCCccccCHHHHccCCcc
Confidence 765321100 000123467789999999999999
Q ss_pred ccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 314 MECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 314 ~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
.++|||||||++|+|++ |..||...+.......+.. ...+..+ ..++..+.+||.+||. +|.+|| ++.++++
T Consensus 192 ~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rp---~~~~i~~ 265 (269)
T cd05044 192 TQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTA-GGRLQKP--ENCPDKIYQLMTNCWAQDPSERP---TFDRIQE 265 (269)
T ss_pred cchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhc-CCccCCc--ccchHHHHHHHHHHcCCCcccCC---CHHHHHH
Confidence 99999999999999998 9999988777666655543 1222333 4688999999999999 999999 8888764
No 369
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-40 Score=346.51 Aligned_cols=254 Identities=23% Similarity=0.376 Sum_probs=215.9
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEccCCC-----EEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEc
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREKKSGN-----IYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQD 157 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~ 157 (452)
+....-++.+.||+|+||.||.|....... .||||.+.+. .+......+.+|..+|+.++|||||++++++.+
T Consensus 689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~--~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~ 766 (1025)
T KOG1095|consen 689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL--SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD 766 (1025)
T ss_pred CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc--CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC
Confidence 456788899999999999999998765332 4899988664 345567889999999999999999999999999
Q ss_pred CCeEEEEEeecCCCChHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeec
Q 012988 158 TEYLYLIMEYLPGGDMMTLLMRE-------DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDF 230 (452)
Q Consensus 158 ~~~~~lV~E~~~ggsL~~~l~~~-------~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DF 230 (452)
....+|++|||.||+|..+|+.. ..++......++.+|+.|++||+++++|||||...|+|++....+||+||
T Consensus 767 ~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDF 846 (1025)
T KOG1095|consen 767 SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADF 846 (1025)
T ss_pred CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEccc
Confidence 99999999999999999999765 35788889999999999999999999999999999999999999999999
Q ss_pred cCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC
Q 012988 231 GLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK 310 (452)
Q Consensus 231 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~ 310 (452)
|+|+.+.....+.... ...-...|||||.+..+
T Consensus 847 GlArDiy~~~yyr~~~-----------------------------------------------~a~lPvkWm~PEsl~d~ 879 (1025)
T KOG1095|consen 847 GLARDIYDKDYYRKHG-----------------------------------------------EAMLPVKWMPPESLKDG 879 (1025)
T ss_pred chhHhhhhchheeccC-----------------------------------------------ccccceecCCHHHHhhc
Confidence 9999653222111000 00123579999999999
Q ss_pred CCCccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHH
Q 012988 311 GYGMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQ 388 (452)
Q Consensus 311 ~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~e 388 (452)
.++.++|||||||+|||++| |..||.+.++.+.+....... .+. .+..++..+.+++.+|+. +|++|| ++..
T Consensus 880 iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg-RL~--~P~~CP~~ly~lM~~CW~~~pe~RP---~F~~ 953 (1025)
T KOG1095|consen 880 IFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG-RLD--PPSYCPEKLYQLMLQCWKHDPEDRP---SFRT 953 (1025)
T ss_pred ccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC-ccC--CCCCCChHHHHHHHHHccCChhhCc---cHHH
Confidence 99999999999999999998 999999999988887776643 444 445899999999999999 999999 8888
Q ss_pred Hhc
Q 012988 389 IKA 391 (452)
Q Consensus 389 il~ 391 (452)
|++
T Consensus 954 i~~ 956 (1025)
T KOG1095|consen 954 IVE 956 (1025)
T ss_pred HHh
Confidence 887
No 370
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=2e-39 Score=310.84 Aligned_cols=254 Identities=24% Similarity=0.373 Sum_probs=204.2
Q ss_pred CCCeeEeceeccCCCeEEEEEEEc----cCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEc--C
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREK----KSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQD--T 158 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~--~ 158 (452)
..+|++++.||+|+||.||+|... .++..||+|++...... .....+.+|+.+++.+.|+||+++++++.. .
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~ 80 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPGG 80 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCCC
Confidence 357889999999999999999864 34889999998765322 345678999999999999999999999887 5
Q ss_pred CeEEEEEeecCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCC
Q 012988 159 EYLYLIMEYLPGGDMMTLLMRED-TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLD 237 (452)
Q Consensus 159 ~~~~lV~E~~~ggsL~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~ 237 (452)
...++||||+++++|.+++.... .++...+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++....
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 68999999999999999997654 68999999999999999999999999999999999999999999999999988654
Q ss_pred CCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccch
Q 012988 238 CSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECD 317 (452)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~D 317 (452)
...... .......++..|+|||.+.+..++.++|
T Consensus 161 ~~~~~~----------------------------------------------~~~~~~~~~~~~~~Pe~~~~~~~~~~~D 194 (284)
T cd05038 161 EDKDYY----------------------------------------------YVKEPGESPIFWYAPECLRTSKFSSASD 194 (284)
T ss_pred cCCcce----------------------------------------------eccCCCCCcccccCcHHHccCCCCcccc
Confidence 211000 0001123556799999999888999999
Q ss_pred hhhhhHHHHHhhhCCCCCCCCChHH--------------HHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCC
Q 012988 318 WWSLGAIMYEMLVGYPPFYADDPIT--------------TCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLG 382 (452)
Q Consensus 318 iwSlGvil~elltG~~Pf~~~~~~~--------------~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~ 382 (452)
|||||+++|+|++|..||....... ....... .....+....++.++.+|+.+||. +|.+||
T Consensus 195 i~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp- 271 (284)
T cd05038 195 VWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLK--EGERLPRPPSCPDEVYDLMKLCWEAEPQDRP- 271 (284)
T ss_pred hHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHH--cCCcCCCCccCCHHHHHHHHHHhccChhhCC-
Confidence 9999999999999999986543211 1122222 222333334678999999999999 999999
Q ss_pred CCCHHHHhc
Q 012988 383 TGGAHQIKA 391 (452)
Q Consensus 383 ~~~~~eil~ 391 (452)
++.+|++
T Consensus 272 --t~~ei~~ 278 (284)
T cd05038 272 --SFADLIL 278 (284)
T ss_pred --CHHHHHH
Confidence 8888874
No 371
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=7.1e-41 Score=292.74 Aligned_cols=253 Identities=30% Similarity=0.493 Sum_probs=210.1
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhC-CCceeeEEEEEEcCC--e
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVA-SHCIVKLYYSFQDTE--Y 160 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~~~~--~ 160 (452)
..++|++++++|+|-|+.||.|.+..+++.++||+++.- ..+.+.+|+.||..|. ||||+++++...+.. .
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV------kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV------KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH------HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 578999999999999999999999999999999998643 2457899999999997 999999999998754 5
Q ss_pred EEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCC-CcEEEeeccCCccCCCC
Q 012988 161 LYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKN-GHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 161 ~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~-g~ikl~DFGla~~~~~~ 239 (452)
..+|+||+.+.+...+. ..++...+++|+.+++.||.|+|+.||+|||+||.|++||.. -.++|+|+|||....++
T Consensus 110 paLiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~ 186 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG 186 (338)
T ss_pred chhHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCC
Confidence 77999999988887765 468888999999999999999999999999999999999965 47999999999987644
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchh
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDW 318 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~Di 318 (452)
..+ .-.+.+..|--||.+.. ..|+.+.|+
T Consensus 187 ~eY--------------------------------------------------nVRVASRyfKGPELLVdy~~YDYSLD~ 216 (338)
T KOG0668|consen 187 KEY--------------------------------------------------NVRVASRYFKGPELLVDYQMYDYSLDM 216 (338)
T ss_pred cee--------------------------------------------------eeeeehhhcCCchheeechhccccHHH
Confidence 322 13456778899999886 668999999
Q ss_pred hhhhHHHHHhhhCCCCC-CCCChHHHHHHHhhcc-----------Cccc---------------------CCC-CCCCCh
Q 012988 319 WSLGAIMYEMLVGYPPF-YADDPITTCRKIVHWR-----------NHLK---------------------FPD-DSKLSP 364 (452)
Q Consensus 319 wSlGvil~elltG~~Pf-~~~~~~~~~~~i~~~~-----------~~~~---------------------~p~-~~~~s~ 364 (452)
|||||+|..|+..+-|| .|.++.+++-+|..-- -.+. -+. ..-+++
T Consensus 217 WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~p 296 (338)
T KOG0668|consen 217 WSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSP 296 (338)
T ss_pred HHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCCh
Confidence 99999999999988887 4666666666664300 0000 011 123579
Q ss_pred hHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCC
Q 012988 365 EAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 365 ~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
++.|||.++|. |-.+|+ ||.|++.||||..+
T Consensus 297 eaiDlldklLrYDHqeRl---TakEam~HpyF~~~ 328 (338)
T KOG0668|consen 297 EAIDLLDKLLRYDHQERL---TAKEAMAHPYFAPV 328 (338)
T ss_pred HHHHHHHHHHhhcccccc---chHHHhcCchHHHH
Confidence 99999999999 999999 99999999999753
No 372
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2e-39 Score=306.74 Aligned_cols=234 Identities=21% Similarity=0.261 Sum_probs=191.4
Q ss_pred ceeccCCCeEEEEEEEccCC----------CEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeE
Q 012988 92 TIIGRGAFGEVRLCREKKSG----------NIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYL 161 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~----------~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~ 161 (452)
+.||+|+||.||+|.+..++ ..+++|++..... ....+.+|+.+++.++||||+++++++.. ...
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 75 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR----DSLAFFETASLMSQLSHKHLVKLYGVCVR-DEN 75 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh----hHHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence 46899999999999998776 3477787654421 14678889999999999999999999988 778
Q ss_pred EEEEeecCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCC-------cEEEeeccCC
Q 012988 162 YLIMEYLPGGDMMTLLMRED-TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNG-------HMKLSDFGLC 233 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g-------~ikl~DFGla 233 (452)
++||||+++|+|.+++.... .++...+..++.|++.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a 155 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP 155 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence 99999999999999997765 789999999999999999999999999999999999999888 8999999998
Q ss_pred ccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC--C
Q 012988 234 KPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK--G 311 (452)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~--~ 311 (452)
...... ....++..|+|||++.+. .
T Consensus 156 ~~~~~~-----------------------------------------------------~~~~~~~~y~aPE~~~~~~~~ 182 (259)
T cd05037 156 ITVLSR-----------------------------------------------------EERVERIPWIAPECIRNGQAS 182 (259)
T ss_pred cccccc-----------------------------------------------------cccccCCCccChhhhcCCCCC
Confidence 754210 123467789999999876 7
Q ss_pred CCccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHH
Q 012988 312 YGMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQI 389 (452)
Q Consensus 312 ~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~ei 389 (452)
++.++|||||||++|+|++ |..||...+......... .......+ ....+.+||.+||. +|.+|| ++.++
T Consensus 183 ~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~li~~~l~~~p~~Rp---t~~~i 254 (259)
T cd05037 183 LTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ-DQHRLPMP----DCAELANLINQCWTYDPTKRP---SFRAI 254 (259)
T ss_pred cchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh-cCCCCCCC----CchHHHHHHHHHhccChhhCC---CHHHH
Confidence 8999999999999999999 688887665433322222 22222222 23899999999999 999999 89988
Q ss_pred hc
Q 012988 390 KA 391 (452)
Q Consensus 390 l~ 391 (452)
++
T Consensus 255 l~ 256 (259)
T cd05037 255 LR 256 (259)
T ss_pred HH
Confidence 75
No 373
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=2.7e-39 Score=312.56 Aligned_cols=258 Identities=17% Similarity=0.143 Sum_probs=190.2
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEccC---CCEEEEEEeecchhcccch--------HHHHHHHHHHHHHhCCCceeeE
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREKKS---GNIYAMKKLKKSEMVKRGQ--------VEHVRAERNLLAEVASHCIVKL 151 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~~~---~~~vavK~~~~~~~~~~~~--------~~~~~~E~~il~~l~hp~iv~l 151 (452)
+..++|++.+.||+|+||+||+|.+..+ +..+|+|+........... ......+...+..+.|++++++
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~ 88 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKY 88 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcE
Confidence 4457899999999999999999998877 6677887643221110000 0111223334556689999999
Q ss_pred EEEEEcCC----eEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEE
Q 012988 152 YYSFQDTE----YLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKL 227 (452)
Q Consensus 152 ~~~~~~~~----~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl 227 (452)
++++.... ..+++++++ ..++.+.+......++..++.++.|++.||.|||+.||+||||||+|||++.++.++|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l 167 (294)
T PHA02882 89 YGCGSFKRCRMYYRFILLEKL-VENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYI 167 (294)
T ss_pred EEeeeEecCCceEEEEEEehh-ccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEE
Confidence 98765443 457888887 4577777766566788999999999999999999999999999999999999999999
Q ss_pred eeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhc
Q 012988 228 SDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVL 307 (452)
Q Consensus 228 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~ 307 (452)
+|||+|+.+........ ..........||+.|+|||++
T Consensus 168 ~DFGla~~~~~~~~~~~------------------------------------------~~~~~~~~~~gt~~y~ape~~ 205 (294)
T PHA02882 168 IDYGIASHFIIHGKHIE------------------------------------------YSKEQKDLHRGTLYYAGLDAH 205 (294)
T ss_pred EEcCCceeeccCCcccc------------------------------------------cccccccccCCCccccCHHHh
Confidence 99999986532110000 000011234699999999999
Q ss_pred cCCCCCccchhhhhhHHHHHhhhCCCCCCCCChHH-HH--------HHHhhccCcccCCCCCCCChhHHHHHHHhhc-Cc
Q 012988 308 LKKGYGMECDWWSLGAIMYEMLVGYPPFYADDPIT-TC--------RKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DV 377 (452)
Q Consensus 308 ~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~-~~--------~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp 377 (452)
.+..++.++|||||||++|||++|..||.+..... .. ..+.. ..... ..+++++.+++..|+. +|
T Consensus 206 ~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~ 280 (294)
T PHA02882 206 NGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHE--GKIKI---KNANKFIYDFIECVTKLSY 280 (294)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhh--hhhcc---CCCCHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999998763222 11 11111 11122 2567999999999998 99
Q ss_pred cccCCCCCHHHHhc
Q 012988 378 EHRLGTGGAHQIKA 391 (452)
Q Consensus 378 ~~R~~~~~~~eil~ 391 (452)
.+|| +..++++
T Consensus 281 ~~rp---~~~~l~~ 291 (294)
T PHA02882 281 EEKP---DYDALIK 291 (294)
T ss_pred CCCC---CHHHHHH
Confidence 9999 8888764
No 374
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-40 Score=330.20 Aligned_cols=199 Identities=33% Similarity=0.526 Sum_probs=173.2
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC------e
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE------Y 160 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~------~ 160 (452)
-|..-+.||+||||.||+++++.+|..||||.+++.. .....+...+|+++|++++|+|||+++++-++.. .
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~ 91 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRL 91 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhc--ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCccccc
Confidence 4667789999999999999999999999999997754 3334677889999999999999999998865543 4
Q ss_pred EEEEEeecCCCChHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEEC--CCC--cEEEeeccCC
Q 012988 161 LYLIMEYLPGGDMMTLLMRE---DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLD--KNG--HMKLSDFGLC 233 (452)
Q Consensus 161 ~~lV~E~~~ggsL~~~l~~~---~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~--~~g--~ikl~DFGla 233 (452)
..+|||||.||||+.+|.+. ..+++.+...++..+..||.|||++|||||||||+||++. .+| .-||+|||.|
T Consensus 92 ~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 92 PVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred ceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 67999999999999999663 4699999999999999999999999999999999999975 334 3599999999
Q ss_pred ccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCC
Q 012988 234 KPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGY 312 (452)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~ 312 (452)
+.++... ...+.+||+.|.+||++.. ..|
T Consensus 172 rel~d~s--------------------------------------------------~~~S~vGT~~YLhPel~E~q~~y 201 (732)
T KOG4250|consen 172 RELDDNS--------------------------------------------------LFTSLVGTEEYLHPELYERQKKY 201 (732)
T ss_pred ccCCCCC--------------------------------------------------eeeeecCchhhcChHHHhhccCc
Confidence 9875321 3447899999999999984 889
Q ss_pred CccchhhhhhHHHHHhhhCCCCCCC
Q 012988 313 GMECDWWSLGAIMYEMLVGYPPFYA 337 (452)
Q Consensus 313 ~~~~DiwSlGvil~elltG~~Pf~~ 337 (452)
+.-+|.|||||++|++.||..||-.
T Consensus 202 ~~tVDLWS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 202 TATVDLWSFGVTLYECATGELPFIP 226 (732)
T ss_pred CceeehhhhhhHHHHHhccCCCCCc
Confidence 9999999999999999999999954
No 375
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=5.7e-39 Score=306.24 Aligned_cols=250 Identities=23% Similarity=0.393 Sum_probs=202.1
Q ss_pred eeEeceeccCCCeEEEEEEEcc---CCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC-----
Q 012988 88 FELLTIIGRGAFGEVRLCREKK---SGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE----- 159 (452)
Q Consensus 88 y~i~~~LG~G~~g~V~~a~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~----- 159 (452)
|.+.+.||+|+||.||+|..+. ++..||||++.... ......+.+.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI-FSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc-CChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence 6778899999999999998653 57899999986543 22334566888999999999999999999886532
Q ss_pred -eEEEEEeecCCCChHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccC
Q 012988 160 -YLYLIMEYLPGGDMMTLLMRE------DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGL 232 (452)
Q Consensus 160 -~~~lV~E~~~ggsL~~~l~~~------~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGl 232 (452)
..+++++|+.+|+|..++... ..++...+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~ 159 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGL 159 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccc
Confidence 347899999999999887432 2478889999999999999999999999999999999999999999999999
Q ss_pred CccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCC
Q 012988 233 CKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGY 312 (452)
Q Consensus 233 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 312 (452)
++.+...... .......+++.|++||.+.+..+
T Consensus 160 ~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~pe~~~~~~~ 192 (273)
T cd05074 160 SKKIYSGDYY-----------------------------------------------RQGCASKLPVKWLALESLADNVY 192 (273)
T ss_pred cccccCCcce-----------------------------------------------ecCCCccCchhhcCHhHHhcCcc
Confidence 8865321100 00012235678999999998899
Q ss_pred CccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHh
Q 012988 313 GMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIK 390 (452)
Q Consensus 313 ~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil 390 (452)
+.++|||||||++|+|++ |.+||.+.+.......+..+. .+..+ ..++..+.+++.+||. +|.+|| ++.+++
T Consensus 193 ~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~l~~~~l~~~p~~Rp---s~~~~~ 266 (273)
T cd05074 193 TTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGN-RLKQP--PDCLEDVYELMCQCWSPEPKCRP---SFQHLR 266 (273)
T ss_pred chhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCC-cCCCC--CCCCHHHHHHHHHHcCCChhhCc---CHHHHH
Confidence 999999999999999999 899998887776666665432 22222 3578999999999998 999999 888887
Q ss_pred c
Q 012988 391 A 391 (452)
Q Consensus 391 ~ 391 (452)
.
T Consensus 267 ~ 267 (273)
T cd05074 267 D 267 (273)
T ss_pred H
Confidence 5
No 376
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=4.5e-39 Score=334.78 Aligned_cols=264 Identities=21% Similarity=0.320 Sum_probs=183.7
Q ss_pred cCCCCCCCeeEeceeccCCCeEEEEEEEccC----CCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEE-
Q 012988 80 RHKICVDDFELLTIIGRGAFGEVRLCREKKS----GNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYS- 154 (452)
Q Consensus 80 ~~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~- 154 (452)
......++|++.+.||+|+||+||+|.+..+ +..||+|++..... .+....+ .+....+.+++.++..
T Consensus 126 ~~~~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-----~e~~~~e--~l~~~~~~~~~~~~~~~ 198 (566)
T PLN03225 126 RPSFKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-----VEIWMNE--RVRRACPNSCADFVYGF 198 (566)
T ss_pred CCCCccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-----hHHHHHH--HHHhhchhhHHHHHHhh
Confidence 3456778999999999999999999999988 99999998754321 1111111 1222222222222221
Q ss_pred -----EEcCCeEEEEEeecCCCChHHHHHhcCC--------------------CCHHHHHHHHHHHHHHHHHHHHCCeee
Q 012988 155 -----FQDTEYLYLIMEYLPGGDMMTLLMREDT--------------------LTENVARFYIAQSVLAIESIHKHNYIH 209 (452)
Q Consensus 155 -----~~~~~~~~lV~E~~~ggsL~~~l~~~~~--------------------~~~~~~~~~~~ql~~aL~~LH~~givH 209 (452)
......+++||||+++++|.+++..... ..+..++.++.|++.||.|||++||+|
T Consensus 199 ~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiH 278 (566)
T PLN03225 199 LEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVH 278 (566)
T ss_pred hcccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence 2456679999999999999999865321 123456789999999999999999999
Q ss_pred cCCCCCcEEECC-CCcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhc
Q 012988 210 RDIKPDNLLLDK-NGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNR 288 (452)
Q Consensus 210 rDlkp~NILl~~-~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (452)
|||||+|||++. ++.+||+|||+|+.+.....
T Consensus 279 RDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~----------------------------------------------- 311 (566)
T PLN03225 279 RDVKPQNIIFSEGSGSFKIIDLGAAADLRVGIN----------------------------------------------- 311 (566)
T ss_pred CcCCHHHEEEeCCCCcEEEEeCCCccccccccc-----------------------------------------------
Confidence 999999999986 58999999999986532110
Q ss_pred cccccccccCCccccchhccCC----------------------CCCccchhhhhhHHHHHhhhCCCCCCCCChHHHHHH
Q 012988 289 RKLAFSTVGTPDYIAPEVLLKK----------------------GYGMECDWWSLGAIMYEMLVGYPPFYADDPITTCRK 346 (452)
Q Consensus 289 ~~~~~~~~Gt~~y~APE~~~~~----------------------~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~ 346 (452)
......+||+.|+|||.+... .++.++|||||||+||||+++..|+. +....+..
T Consensus 312 -~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~--~~~~~~~~ 388 (566)
T PLN03225 312 -YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSD--SNLIQFNR 388 (566)
T ss_pred -cCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCc--hHHHHHHH
Confidence 011245789999999976432 23456799999999999999776653 22222222
Q ss_pred Hhh--------ccCccc--C--------CCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCCCcccc
Q 012988 347 IVH--------WRNHLK--F--------PDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDVVWDKL 403 (452)
Q Consensus 347 i~~--------~~~~~~--~--------p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~~~~~l 403 (452)
++. |..... . ......+..+++||.+||+ ||.+|| ++.++|+||||++..+..+
T Consensus 389 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~---ta~e~L~Hpff~~~~~~~~ 461 (566)
T PLN03225 389 QLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRI---SAKAALAHPYFDREGLLGL 461 (566)
T ss_pred HHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCC---CHHHHhCCcCcCCCCcccc
Confidence 221 100000 0 0001123456799999999 999999 9999999999998877544
No 377
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.4e-38 Score=303.20 Aligned_cols=248 Identities=17% Similarity=0.237 Sum_probs=191.8
Q ss_pred ceeccCCCeEEEEEEEccC--CCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeecC
Q 012988 92 TIIGRGAFGEVRLCREKKS--GNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLP 169 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~ 169 (452)
+.||+|+||+||++....+ ...+++|.+.... .......+.+|+.+++.++||||+++++.+.+...+|+||||++
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANA--SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCE 78 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCC--ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCC
Confidence 3699999999999975433 2345666654432 12235678899999999999999999999999999999999999
Q ss_pred CCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 170 GGDMMTLLMRE----DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 170 ggsL~~~l~~~----~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
+|+|.+++... ..+++..+..++.|++.||.|||+.+|+||||||+|||++.++.++|+|||++........
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~---- 154 (268)
T cd05086 79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY---- 154 (268)
T ss_pred CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchh----
Confidence 99999999753 3456777888999999999999999999999999999999999999999999764211000
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-------CCCCccchh
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-------KGYGMECDW 318 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-------~~~~~~~Di 318 (452)
.......+|++.|+|||++.. ..++.++||
T Consensus 155 -------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Di 191 (268)
T cd05086 155 -------------------------------------------IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNV 191 (268)
T ss_pred -------------------------------------------hhcccCCcCcccccCchhcccccCccccCCCCCcchh
Confidence 000113468899999999853 245789999
Q ss_pred hhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccC-cccCCC-CCCCChhHHHHHHHhhcCccccCCCCCHHHHhc
Q 012988 319 WSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRN-HLKFPD-DSKLSPEAKDLICRLLCDVEHRLGTGGAHQIKA 391 (452)
Q Consensus 319 wSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~-~~~~p~-~~~~s~~~~dLi~~mL~dp~~R~~~~~~~eil~ 391 (452)
|||||++|||++ |..||...+..+.+..+..... .+..|. ...+++.+.++|..|+.+|.+|| ++.+|++
T Consensus 192 wslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~P~~Rp---~~~~i~~ 264 (268)
T cd05086 192 WALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCWLSPEKRA---TAEEVHR 264 (268)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHhhCcccCC---CHHHHHH
Confidence 999999999997 5778887777666666544211 111111 12478889999999988999999 8988864
No 378
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-39 Score=328.75 Aligned_cols=261 Identities=30% Similarity=0.507 Sum_probs=224.3
Q ss_pred CCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEE---
Q 012988 81 HKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQ--- 156 (452)
Q Consensus 81 ~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~--- 156 (452)
.....+-|+|+..||.|.+|+||+++++.+++..|+|++.... +.-+.+..|.+|++.. .|||++.+|++|.
T Consensus 14 lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~----d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~ 89 (953)
T KOG0587|consen 14 LPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE----DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKD 89 (953)
T ss_pred CCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc----cccHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence 3455678999999999999999999999999999999986543 2234577788888887 6999999999985
Q ss_pred --cCCeEEEEEeecCCCChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccC
Q 012988 157 --DTEYLYLIMEYLPGGDMMTLLMR--EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGL 232 (452)
Q Consensus 157 --~~~~~~lV~E~~~ggsL~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGl 232 (452)
.++.++||||||.|||.-++++. ...+.|..+.+|++.++.||.+||.+.++|||||-.|||++.+|.|||+|||+
T Consensus 90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGv 169 (953)
T KOG0587|consen 90 PGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGV 169 (953)
T ss_pred CCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeee
Confidence 35689999999999999999865 46799999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC---
Q 012988 233 CKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK--- 309 (452)
Q Consensus 233 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~--- 309 (452)
+..+.. ..+...+.+|||.|||||++..
T Consensus 170 SaQlds-------------------------------------------------T~grRnT~iGtP~WMAPEViac~e~ 200 (953)
T KOG0587|consen 170 SAQLDS-------------------------------------------------TVGRRNTFIGTPYWMAPEVIACDES 200 (953)
T ss_pred eeeeec-------------------------------------------------ccccccCcCCCcccccceeeecccC
Confidence 987642 2234568899999999999974
Q ss_pred --CCCCccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCH
Q 012988 310 --KGYGMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGA 386 (452)
Q Consensus 310 --~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~ 386 (452)
..|+..+|+||||++..||.-|.+|+...-+...+..|.. +.++.+-.+...+.++.|||..||. |-+.|| +.
T Consensus 201 ~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpR-NPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP---~~ 276 (953)
T KOG0587|consen 201 PDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR-NPPPKLKRPKKWSKKFNDFISTCLVKDYEQRP---ST 276 (953)
T ss_pred CCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCC-CCCccccchhhHHHHHHHHHHHHHhhccccCc---ch
Confidence 3478899999999999999999999999888877776654 2334444455778999999999998 999999 89
Q ss_pred HHHhcCCCcCCC
Q 012988 387 HQIKAHPWFKDV 398 (452)
Q Consensus 387 ~eil~hp~f~~~ 398 (452)
.++++|||...-
T Consensus 277 ~~ll~hpFi~e~ 288 (953)
T KOG0587|consen 277 EELLKHPFITEQ 288 (953)
T ss_pred hhhccCCccccc
Confidence 999999999853
No 379
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=1.4e-40 Score=320.27 Aligned_cols=262 Identities=25% Similarity=0.419 Sum_probs=216.2
Q ss_pred hhhcCCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCC------Cceee
Q 012988 77 RLKRHKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVAS------HCIVK 150 (452)
Q Consensus 77 ~~~~~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h------p~iv~ 150 (452)
+..-+++.-++|.+....|+|-||+|..|.+...|+.||||+|....+... .=+.|++||+.|+. .|.++
T Consensus 423 rv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~K----tGl~EleiLkKL~~AD~Edk~Hclr 498 (752)
T KOG0670|consen 423 RVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHK----TGLKELEILKKLNDADPEDKFHCLR 498 (752)
T ss_pred EEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhh----hhhHHHHHHHHhhccCchhhhHHHH
Confidence 334456667889999999999999999999999999999999987755432 33569999999952 48999
Q ss_pred EEEEEEcCCeEEEEEeecCCCChHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCC-cEE
Q 012988 151 LYYSFQDTEYLYLIMEYLPGGDMMTLLMRED---TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNG-HMK 226 (452)
Q Consensus 151 l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g-~ik 226 (452)
++..|...+++|||+|.+ .-+|.++|++.+ .+....++.|+.|++.||..|-.+||+|.||||+|||++++- .+|
T Consensus 499 l~r~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLK 577 (752)
T KOG0670|consen 499 LFRHFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILK 577 (752)
T ss_pred HHHHhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceee
Confidence 999999999999999998 779999998754 578889999999999999999999999999999999999765 579
Q ss_pred EeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchh
Q 012988 227 LSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEV 306 (452)
Q Consensus 227 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~ 306 (452)
|||||.|....... .+.+.-+..|.|||+
T Consensus 578 LCDfGSA~~~~ene---------------------------------------------------itPYLVSRFYRaPEI 606 (752)
T KOG0670|consen 578 LCDFGSASFASENE---------------------------------------------------ITPYLVSRFYRAPEI 606 (752)
T ss_pred eccCcccccccccc---------------------------------------------------ccHHHHHHhccCcce
Confidence 99999987653221 112345678999999
Q ss_pred ccCCCCCccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCC-------------C---------------
Q 012988 307 LLKKGYGMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFP-------------D--------------- 358 (452)
Q Consensus 307 ~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p-------------~--------------- 358 (452)
+.|.+|++..|+||+||+||||.||+..|.|.++..++.-.+..++.++-. .
T Consensus 607 iLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r 686 (752)
T KOG0670|consen 607 ILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTER 686 (752)
T ss_pred eecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccc
Confidence 999999999999999999999999999999998888877665533221100 0
Q ss_pred ---------------------CCCC-------ChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 359 ---------------------DSKL-------SPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 359 ---------------------~~~~-------s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
.+.+ -..+++|+.+||. ||++|+ ++.++|.||||..
T Consensus 687 ~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRi---t~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 687 EKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRI---TVNQALKHPFITE 751 (752)
T ss_pred eeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcC---CHHHHhcCCcccC
Confidence 0001 2457899999999 999999 9999999999963
No 380
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=7e-41 Score=298.75 Aligned_cols=262 Identities=28% Similarity=0.453 Sum_probs=211.0
Q ss_pred CCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHH-HHHhCCCceeeEEEEEEcCC
Q 012988 81 HKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNL-LAEVASHCIVKLYYSFQDTE 159 (452)
Q Consensus 81 ~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~i-l~~l~hp~iv~l~~~~~~~~ 159 (452)
..+..++.+-+..||.|+||+|++..++.+|+..|||.+..... .....++..|.+. ++.-+.||||++|+....++
T Consensus 59 ~~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EG 136 (361)
T KOG1006|consen 59 HTFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEG 136 (361)
T ss_pred cccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCC
Confidence 45667778888999999999999999999999999999976543 2334566677664 55567999999999999999
Q ss_pred eEEEEEeecCCCChHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCCCcEEECCCCcEEEeeccCC
Q 012988 160 YLYLIMEYLPGGDMMTLLM-----REDTLTENVARFYIAQSVLAIESIHKH-NYIHRDIKPDNLLLDKNGHMKLSDFGLC 233 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~-----~~~~~~~~~~~~~~~ql~~aL~~LH~~-givHrDlkp~NILl~~~g~ikl~DFGla 233 (452)
..+|.||+| .-||..+.+ .+..++|..+-.+....+.||+||-.. .||||||||+|||++..|.+||||||++
T Consensus 137 dcWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIc 215 (361)
T KOG1006|consen 137 DCWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGIC 215 (361)
T ss_pred ceeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccch
Confidence 999999999 456655432 356899999999999999999999874 8999999999999999999999999998
Q ss_pred ccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC--CC
Q 012988 234 KPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK--KG 311 (452)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~--~~ 311 (452)
-.+..+.. .+.-+|-..|||||.+.. .+
T Consensus 216 GqLv~SiA--------------------------------------------------kT~daGCrpYmAPERi~p~~~g 245 (361)
T KOG1006|consen 216 GQLVDSIA--------------------------------------------------KTVDAGCRPYMAPERIDPSDKG 245 (361)
T ss_pred HhHHHHHH--------------------------------------------------hhhccCCccccChhccCCccCC
Confidence 87643311 113368889999999974 56
Q ss_pred CCccchhhhhhHHHHHhhhCCCCCCCCCh-HHHHHHHhhccCcccCCC--CCCCChhHHHHHHHhhc-CccccCCCCCHH
Q 012988 312 YGMECDWWSLGAIMYEMLVGYPPFYADDP-ITTCRKIVHWRNHLKFPD--DSKLSPEAKDLICRLLC-DVEHRLGTGGAH 387 (452)
Q Consensus 312 ~~~~~DiwSlGvil~elltG~~Pf~~~~~-~~~~~~i~~~~~~~~~p~--~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~ 387 (452)
|+.++|+||||++|||+.||..|+.+-+. .+.+..+..+..+.-.+. ...++..++.+|.-||. |-..|| ...
T Consensus 246 yDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rp---ky~ 322 (361)
T KOG1006|consen 246 YDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRP---KYD 322 (361)
T ss_pred cchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCc---chh
Confidence 99999999999999999999999987554 334444444322221111 23589999999999998 999999 899
Q ss_pred HHhcCCCcCCC
Q 012988 388 QIKAHPWFKDV 398 (452)
Q Consensus 388 eil~hp~f~~~ 398 (452)
+++++||++..
T Consensus 323 ~Lk~~~fyr~y 333 (361)
T KOG1006|consen 323 DLKKFPFYRMY 333 (361)
T ss_pred hhhcCchhhhh
Confidence 99999999853
No 381
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1e-37 Score=317.31 Aligned_cols=265 Identities=22% Similarity=0.312 Sum_probs=189.7
Q ss_pred CCCCCCCeeEeceeccCCCeEEEEEEEc----------------cCCCEEEEEEeecchhcc-----------cchHHHH
Q 012988 81 HKICVDDFELLTIIGRGAFGEVRLCREK----------------KSGNIYAMKKLKKSEMVK-----------RGQVEHV 133 (452)
Q Consensus 81 ~~~~~~~y~i~~~LG~G~~g~V~~a~~~----------------~~~~~vavK~~~~~~~~~-----------~~~~~~~ 133 (452)
..+..++|.+.++||+|+||+||+|... ..+..||||.+....... ....+..
T Consensus 140 ~r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~ 219 (507)
T PLN03224 140 SRWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETG 219 (507)
T ss_pred CCccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchh
Confidence 3467889999999999999999999642 345679999986432110 0111223
Q ss_pred HHHHHHHHHhCCCce-----eeEEEEEEc--------CCeEEEEEeecCCCChHHHHHhcC-------------------
Q 012988 134 RAERNLLAEVASHCI-----VKLYYSFQD--------TEYLYLIMEYLPGGDMMTLLMRED------------------- 181 (452)
Q Consensus 134 ~~E~~il~~l~hp~i-----v~l~~~~~~--------~~~~~lV~E~~~ggsL~~~l~~~~------------------- 181 (452)
..|+.++..++|.++ ++++++|.. .+..++||||+++|+|.+++....
T Consensus 220 ~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~ 299 (507)
T PLN03224 220 MVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPD 299 (507)
T ss_pred HHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhh
Confidence 346677777776654 566666642 356899999999999999886421
Q ss_pred -----CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccccccCccccC
Q 012988 182 -----TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMA 256 (452)
Q Consensus 182 -----~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~ 256 (452)
.++...++.++.|++.||.|||+.||+||||||+|||++.++.+||+|||++........
T Consensus 300 ~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~--------------- 364 (507)
T PLN03224 300 NMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN--------------- 364 (507)
T ss_pred hcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCc---------------
Confidence 234567888999999999999999999999999999999999999999999875421100
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCC--------------------CC--c
Q 012988 257 EPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKG--------------------YG--M 314 (452)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~--------------------~~--~ 314 (452)
.......+|+.|+|||++.... |+ .
T Consensus 365 ---------------------------------~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~ 411 (507)
T PLN03224 365 ---------------------------------FNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPD 411 (507)
T ss_pred ---------------------------------cCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCC
Confidence 0001223588999999986432 22 2
Q ss_pred cchhhhhhHHHHHhhhCCC-CCCCCChHH----HHHHH-hhc----cCcccCCCCCCCChhHHHHHHHhhc-Cc---ccc
Q 012988 315 ECDWWSLGAIMYEMLVGYP-PFYADDPIT----TCRKI-VHW----RNHLKFPDDSKLSPEAKDLICRLLC-DV---EHR 380 (452)
Q Consensus 315 ~~DiwSlGvil~elltG~~-Pf~~~~~~~----~~~~i-~~~----~~~~~~p~~~~~s~~~~dLi~~mL~-dp---~~R 380 (452)
+.||||+||++|+|++|.. ||.+..... ..... ..| .....++....+++.++|||.+||. +| .+|
T Consensus 412 ~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~R 491 (507)
T PLN03224 412 LFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGR 491 (507)
T ss_pred ccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccC
Confidence 4799999999999999986 775321111 00000 011 1234455555789999999999998 66 578
Q ss_pred CCCCCHHHHhcCCCcC
Q 012988 381 LGTGGAHQIKAHPWFK 396 (452)
Q Consensus 381 ~~~~~~~eil~hp~f~ 396 (452)
+ |+.|+|+||||.
T Consensus 492 l---Sa~eaL~Hp~f~ 504 (507)
T PLN03224 492 L---SVGQALSHRFFL 504 (507)
T ss_pred C---CHHHHhCCCCcC
Confidence 8 999999999996
No 382
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-38 Score=301.48 Aligned_cols=138 Identities=23% Similarity=0.423 Sum_probs=118.6
Q ss_pred hhcCCCCC-CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhC-----CC---ce
Q 012988 78 LKRHKICV-DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVA-----SH---CI 148 (452)
Q Consensus 78 ~~~~~~~~-~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-----hp---~i 148 (452)
.+.+.... .+|-++++||+|-|++||+|++..+.++||+|+++... ...+....|+.+|+.+. |+ +|
T Consensus 69 V~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq----hYtEaAlDEIklL~~v~~~Dp~~~~~~~V 144 (590)
T KOG1290|consen 69 VRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ----HYTEAALDEIKLLQQVREGDPNDPGKKCV 144 (590)
T ss_pred eeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh----HHHHHHHHHHHHHHHHHhcCCCCCCCcee
Confidence 33444444 89999999999999999999999999999999997653 34456778999999883 33 69
Q ss_pred eeEEEEEEc----CCeEEEEEeecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCCCcEEEC
Q 012988 149 VKLYYSFQD----TEYLYLIMEYLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHK-HNYIHRDIKPDNLLLD 220 (452)
Q Consensus 149 v~l~~~~~~----~~~~~lV~E~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~-~givHrDlkp~NILl~ 220 (452)
|+|++.|.. +.++|||+|++ |.+|..+|... +.++...++.|++||+.||.|||. +||||.||||+|||+.
T Consensus 145 V~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 145 VQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred eeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 999999975 45899999999 88999998764 579999999999999999999997 5999999999999984
No 383
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-40 Score=293.14 Aligned_cols=260 Identities=29% Similarity=0.465 Sum_probs=215.3
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC-----e
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE-----Y 160 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~-----~ 160 (452)
.|.+--+.||.|+||.||.+.+-.+|+.||+|++..- ...-...+++.+|..+|...+|.|+...++..+-.+ .
T Consensus 53 ~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnv-fq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqE 131 (449)
T KOG0664|consen 53 QDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNV-FQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQE 131 (449)
T ss_pred ccCCCCCcccccceeEEEeccCCCCccchhHhhcchH-HHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHH
Confidence 4556678999999999999999999999999988532 223334577889999999999999999988877554 4
Q ss_pred EEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCc
Q 012988 161 LYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCST 240 (452)
Q Consensus 161 ~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~ 240 (452)
+|+|+|+| ..+|..++-+...++.+.++.+++||+.||.|||+.||+||||||.|.|++++..+||||||+|+.....
T Consensus 132 iYV~TELm-QSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d- 209 (449)
T KOG0664|consen 132 LYVLTELM-QSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQR- 209 (449)
T ss_pred HHHHHHHH-HhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchh-
Confidence 78999999 5689999888889999999999999999999999999999999999999999999999999999965321
Q ss_pred chhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC-CCCCccchhh
Q 012988 241 LYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK-KGYGMECDWW 319 (452)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~-~~~~~~~Diw 319 (452)
.+..++..+-|..|+|||++.+ ..|+.++|||
T Consensus 210 -----------------------------------------------~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiW 242 (449)
T KOG0664|consen 210 -----------------------------------------------DRLNMTHEVVTQYYRAPELLMGARRYTGAVDIW 242 (449)
T ss_pred -----------------------------------------------hhhhhHHHHHHHHhccHHHhhcchhhcCcccee
Confidence 1223345567889999999998 5689999999
Q ss_pred hhhHHHHHhhhCCCCCCCCChHHHHHHHhhcc---------------------CcccCCCC---------CCCChhHHHH
Q 012988 320 SLGAIMYEMLVGYPPFYADDPITTCRKIVHWR---------------------NHLKFPDD---------SKLSPEAKDL 369 (452)
Q Consensus 320 SlGvil~elltG~~Pf~~~~~~~~~~~i~~~~---------------------~~~~~p~~---------~~~s~~~~dL 369 (452)
|+|||+.||+..+..|...++.+.+..|...- ....-|+. ..-..++.++
T Consensus 243 SVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~ 322 (449)
T KOG0664|consen 243 SVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDL 322 (449)
T ss_pred hhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHH
Confidence 99999999999999999999988887775421 12222221 1224578899
Q ss_pred HHHhhc-CccccCCCCCHHHHhcCCCcCCC
Q 012988 370 ICRLLC-DVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 370 i~~mL~-dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
+.+||. ||..|+ +..+++.|++....
T Consensus 323 ~~~~l~~d~dkri---s~~~A~~~~~~~e~ 349 (449)
T KOG0664|consen 323 LQKLLHFDPDKRI---SVEEALQHRYLEEG 349 (449)
T ss_pred HHHHhCCCCcccc---cHhhhccccccccc
Confidence 999999 999999 89999999998764
No 384
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=7.7e-37 Score=284.73 Aligned_cols=241 Identities=48% Similarity=0.826 Sum_probs=203.6
Q ss_pred CCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeecCCCChHHHH
Q 012988 98 AFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDMMTLL 177 (452)
Q Consensus 98 ~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l 177 (452)
+||.||+|....+|..+|+|++........ ...+.+|+.+++.++|+||+++++.+......++|+||+++++|.+++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence 589999999999999999999876533221 567889999999999999999999999999999999999999999999
Q ss_pred HhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccccccCccccCC
Q 012988 178 MREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAE 257 (452)
Q Consensus 178 ~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~ 257 (452)
.....++...+..++.+++.+|.|||+.||+|+||+|.||+++.++.++|+|||.+.......
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~----------------- 141 (244)
T smart00220 79 KKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG----------------- 141 (244)
T ss_pred HhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc-----------------
Confidence 776668999999999999999999999999999999999999999999999999988654211
Q ss_pred CCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhhCCCCCCC
Q 012988 258 PMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYA 337 (452)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~ 337 (452)
......|+..|+|||.+.+..++.++||||||+++|+|++|..||..
T Consensus 142 ---------------------------------~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~ 188 (244)
T smart00220 142 ---------------------------------LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPG 188 (244)
T ss_pred ---------------------------------ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 11234688899999999988899999999999999999999999987
Q ss_pred -CChHHHHHHHhhccCcccCCCC-CCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 338 -DDPITTCRKIVHWRNHLKFPDD-SKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 338 -~~~~~~~~~i~~~~~~~~~p~~-~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
.+.......+.. ........ ..++.++.+++.+||. +|.+|| ++.++++||||
T Consensus 189 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp---~~~~~~~~~~~ 244 (244)
T smart00220 189 DDQLLELFKKIGK--PKPPFPPPEWKISPEAKDLIRKLLVKDPEKRL---TAEEALQHPFF 244 (244)
T ss_pred CCcHHHHHHHHhc--cCCCCccccccCCHHHHHHHHHHccCCchhcc---CHHHHhhCCCC
Confidence 444444443332 11121111 1278999999999998 999999 99999999997
No 385
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-39 Score=319.40 Aligned_cols=282 Identities=38% Similarity=0.648 Sum_probs=243.9
Q ss_pred eeccCCCeEEEEEEE---ccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhC-CCceeeEEEEEEcCCeEEEEEeec
Q 012988 93 IIGRGAFGEVRLCRE---KKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVA-SHCIVKLYYSFQDTEYLYLIMEYL 168 (452)
Q Consensus 93 ~LG~G~~g~V~~a~~---~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~~~~~~~lV~E~~ 168 (452)
.+|.|+||.|++++. ...|..||+|+.++......... +...|..++..++ ||++|++...|+.+..+++++++.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 479999999998764 34578899999988766555444 7778999999997 999999999999999999999999
Q ss_pred CCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcccc
Q 012988 169 PGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHK 248 (452)
Q Consensus 169 ~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~ 248 (452)
.||+|...+.....+++...+.+...++.|++++|+.||+|||+|++||+++.+|++++.|||+++..-..
T Consensus 80 rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~--------- 150 (612)
T KOG0603|consen 80 RGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKE--------- 150 (612)
T ss_pred ccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhh---------
Confidence 99999999988899999999999999999999999999999999999999999999999999999865211
Q ss_pred ccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHh
Q 012988 249 TIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 328 (452)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~el 328 (452)
...|||..|||||++. ++..++|+||||+++|||
T Consensus 151 --------------------------------------------~~~cgt~eymApEI~~--gh~~a~D~ws~gvl~fel 184 (612)
T KOG0603|consen 151 --------------------------------------------KIACGTYEYRAPEIIN--GHLSAADWWSFGVLAFEL 184 (612)
T ss_pred --------------------------------------------hhcccchhhhhhHhhh--ccCCcccchhhhhhHHHH
Confidence 0228999999999998 788999999999999999
Q ss_pred hhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCC--CHHHHhcCCCcCCCCccccc-
Q 012988 329 LVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTG--GAHQIKAHPWFKDVVWDKLY- 404 (452)
Q Consensus 329 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~--~~~eil~hp~f~~~~~~~l~- 404 (452)
+||..||.+ ++...|.. ..+.+| ..++..+++++..|+. +|..|++.+ .+.++++|+||..++|.++.
T Consensus 185 ltg~~pf~~----~~~~~Il~--~~~~~p--~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~l~~ 256 (612)
T KOG0603|consen 185 LTGTLPFGG----DTMKRILK--AELEMP--RELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNELEA 256 (612)
T ss_pred hhCCCCCch----HHHHHHhh--hccCCc--hhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHhhHhh
Confidence 999999987 56666664 344455 4789999999999998 999999874 89999999999999999774
Q ss_pred -cCCCCccccCCCCccCCCCCCCCCCCCCCCCCCC
Q 012988 405 -EMEAAFKPEINGELDTQNFMKFDELDPPASGRTS 438 (452)
Q Consensus 405 -~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (452)
+..+||+|.+..+.|..+|+.......|+..+..
T Consensus 257 r~~~~~fkp~~~~e~~~~~fd~eft~~~P~dsp~~ 291 (612)
T KOG0603|consen 257 RSRPPPFKPGSITERDVAQFDPEFTSQVPADSPLL 291 (612)
T ss_pred cCCCCCCCCcccchhhhhhcCchhccCCcccCCCC
Confidence 6889999999999999999985544444444433
No 386
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-38 Score=310.02 Aligned_cols=253 Identities=21% Similarity=0.333 Sum_probs=213.1
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccC-CC--EEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKS-GN--IYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYL 161 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~-~~--~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~ 161 (452)
.++..+.++||+|.||.|+.|.++.. |+ .||||++....... ....|.+|+.+|.+|+|+|+++||++..+ ..+
T Consensus 109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~H~hliRLyGvVl~-qp~ 185 (1039)
T KOG0199|consen 109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPA 185 (1039)
T ss_pred HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhccCcceeEEeeeecc-chh
Confidence 34566788999999999999988753 33 58999997664432 56789999999999999999999999988 678
Q ss_pred EEEEeecCCCChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 162 YLIMEYLPGGDMMTLLMR--EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
.||||+++.|+|.+.|.+ ...|.......|+.||+.|+.||.++++|||||...|||+-....|||+||||.+.+...
T Consensus 186 mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 186 MMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGEN 265 (1039)
T ss_pred hHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence 899999999999999977 356888889999999999999999999999999999999999999999999999988643
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhh
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWW 319 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Diw 319 (452)
..+... ....--...|+|||.+....++.++|+|
T Consensus 266 ed~Yvm----------------------------------------------~p~rkvPfAWCaPEsLrh~kFShaSDvW 299 (1039)
T KOG0199|consen 266 EDMYVM----------------------------------------------APQRKVPFAWCAPESLRHRKFSHASDVW 299 (1039)
T ss_pred CcceEe----------------------------------------------cCCCcCcccccCHhHhccccccccchhh
Confidence 221100 0011123469999999999999999999
Q ss_pred hhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcC
Q 012988 320 SLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAH 392 (452)
Q Consensus 320 SlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~h 392 (452)
++||+||||++ |+.||.|.....++++|- .+..+..|. .++.++.++++.|+. +|.+|| ++..|.+.
T Consensus 300 myGVTiWEMFtyGEePW~G~~g~qIL~~iD-~~erLpRPk--~csedIY~imk~cWah~paDRp---tFsair~~ 368 (1039)
T KOG0199|consen 300 MYGVTIWEMFTYGEEPWVGCRGIQILKNID-AGERLPRPK--YCSEDIYQIMKNCWAHNPADRP---TFSAIRED 368 (1039)
T ss_pred hhhhhHHhhhccCCCCCCCCCHHHHHHhcc-ccccCCCCC--CChHHHHHHHHHhccCCccccc---cHHHHHHh
Confidence 99999999997 899999999999998887 345555554 799999999999999 999999 77777543
No 387
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=100.00 E-value=4e-38 Score=306.93 Aligned_cols=202 Identities=32% Similarity=0.536 Sum_probs=181.5
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccc-----hHHHHHHHHHHHHHhC---CCceeeEEEEEE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRG-----QVEHVRAERNLLAEVA---SHCIVKLYYSFQ 156 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~-----~~~~~~~E~~il~~l~---hp~iv~l~~~~~ 156 (452)
..+|..++.||.|+||+|++|.++.+...|+||.+.|..+.... ..-.+-.|+.||..++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 46799999999999999999999999999999999887654332 2334678999999998 999999999999
Q ss_pred cCCeEEEEEeec-CCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCcc
Q 012988 157 DTEYLYLIMEYL-PGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKP 235 (452)
Q Consensus 157 ~~~~~~lV~E~~-~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~ 235 (452)
+++++||+||-. +|-+|.+++.....++|.+++.++.|++.|+++||+.||||||||-|||.++.+|-+||+|||.|..
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~ 719 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAY 719 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchhh
Confidence 999999999986 5679999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCC-Cc
Q 012988 236 LDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGY-GM 314 (452)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~-~~ 314 (452)
...+ ....++||..|.|||++.+.+| +.
T Consensus 720 ~ksg---------------------------------------------------pfd~f~gtv~~aapevl~g~~y~gk 748 (772)
T KOG1152|consen 720 TKSG---------------------------------------------------PFDVFVGTVDYAAPEVLGGEKYLGK 748 (772)
T ss_pred hcCC---------------------------------------------------CcceeeeeccccchhhhCCCccCCC
Confidence 5322 2236899999999999999998 78
Q ss_pred cchhhhhhHHHHHhhhCCCCCCC
Q 012988 315 ECDWWSLGAIMYEMLVGYPPFYA 337 (452)
Q Consensus 315 ~~DiwSlGvil~elltG~~Pf~~ 337 (452)
.-|||+||++||.++....||+.
T Consensus 749 ~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 749 PQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred cchhhhhhheeeEEEeccCCCcC
Confidence 89999999999999999999864
No 388
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-37 Score=304.97 Aligned_cols=246 Identities=23% Similarity=0.368 Sum_probs=205.8
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEccC----CCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREKKS----GNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT 158 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~ 158 (452)
+......+.+.||.|-||.||.|..... .--||||..+.+.. .+..+.|..|..+|++++|||||+++|++.+.
T Consensus 386 l~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t--~d~tekflqEa~iMrnfdHphIikLIGv~~e~ 463 (974)
T KOG4257|consen 386 LRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCT--PDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ 463 (974)
T ss_pred eehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCC--hhhHHHHHHHHHHHHhCCCcchhheeeeeecc
Confidence 3334455567899999999999986432 33589999887653 33478899999999999999999999999765
Q ss_pred CeEEEEEeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCC
Q 012988 159 EYLYLIMEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLD 237 (452)
Q Consensus 159 ~~~~lV~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~ 237 (452)
..+||||+++-|.|+.+|+.+ ..++......|+.||+.||.|||+..+|||||...|||+.+..-+||+||||++.+.
T Consensus 464 -P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~e 542 (974)
T KOG4257|consen 464 -PMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLE 542 (974)
T ss_pred -ceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhcc
Confidence 588999999999999999876 578889999999999999999999999999999999999999999999999999876
Q ss_pred CCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccch
Q 012988 238 CSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECD 317 (452)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~D 317 (452)
....+.. ....-...|||||.+.-..++.++|
T Consensus 543 d~~yYka------------------------------------------------S~~kLPIKWmaPESINfRrFTtASD 574 (974)
T KOG4257|consen 543 DDAYYKA------------------------------------------------SRGKLPIKWMAPESINFRRFTTASD 574 (974)
T ss_pred ccchhhc------------------------------------------------cccccceeecCccccchhcccchhh
Confidence 4432210 0111235799999999999999999
Q ss_pred hhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCC
Q 012988 318 WWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLG 382 (452)
Q Consensus 318 iwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~ 382 (452)
||.|||++||++. |..||.+-.+.+.+..|.++ ..++.| +.+++.+..|+.+|+. +|.+||.
T Consensus 575 VWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnG-eRlP~P--~nCPp~LYslmskcWayeP~kRPr 638 (974)
T KOG4257|consen 575 VWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENG-ERLPCP--PNCPPALYSLMSKCWAYEPSKRPR 638 (974)
T ss_pred HHHHHHHHHHHHHhcCCccccccccceEEEecCC-CCCCCC--CCCChHHHHHHHHHhccCcccCCc
Confidence 9999999999985 99999998888877777653 344444 5899999999999999 9999995
No 389
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-37 Score=301.59 Aligned_cols=257 Identities=21% Similarity=0.318 Sum_probs=210.8
Q ss_pred CCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeE
Q 012988 82 KICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYL 161 (452)
Q Consensus 82 ~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~ 161 (452)
++..+...+.++||+|-||.|.+|.-.. +..||+|.++... ..+....+.+|+++|.+++|||||+++++|..++.+
T Consensus 534 EfPRs~L~~~ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a--~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePi 610 (807)
T KOG1094|consen 534 EFPRSRLRFKEKIGEGQFGEVHLCEVEG-PLKVAVKILRPDA--TKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPL 610 (807)
T ss_pred hcchhheehhhhhcCcccceeEEEEecC-ceEEEEeecCccc--chhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCch
Confidence 4455677889999999999999998643 6899999997654 233457899999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 162 YLIMEYLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
|+|+|||.+|+|.+++..+ ..........++.||+.|++||.+.++|||||.+.|+|++.++++||+|||.++.+..+
T Consensus 611 cmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg 690 (807)
T KOG1094|consen 611 CMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSG 690 (807)
T ss_pred HHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccC
Confidence 9999999999999999876 33344556669999999999999999999999999999999999999999999977544
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhh
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWW 319 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Diw 319 (452)
..+..+ ...+-...|||||.+.-++++.++|+|
T Consensus 691 ~yy~vq-----------------------------------------------gr~vlpiRwmawEsillgkFttaSDvW 723 (807)
T KOG1094|consen 691 DYYRVQ-----------------------------------------------GRAVLPIRWMAWESILLGKFTTASDVW 723 (807)
T ss_pred Cceeee-----------------------------------------------cceeeeeeehhHHHHHhccccchhhhh
Confidence 322211 123445789999999999999999999
Q ss_pred hhhHHHHHhh--hCCCCCCCCChHHHHHHHhhcc----CcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 320 SLGAIMYEML--VGYPPFYADDPITTCRKIVHWR----NHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 320 SlGvil~ell--tG~~Pf~~~~~~~~~~~i~~~~----~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
+||+++||++ +...||....+.+...+....- .....+.+.-++..+..||.+|+. |-.+|| +++++-.
T Consensus 724 afgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RP---sFe~lh~ 799 (807)
T KOG1094|consen 724 AFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRP---SFEQLHL 799 (807)
T ss_pred hhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCC---CHHHHHH
Confidence 9999999986 4889998887776665543311 112233345688999999999998 999999 8888743
No 390
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-37 Score=301.31 Aligned_cols=252 Identities=23% Similarity=0.350 Sum_probs=214.1
Q ss_pred cCCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCC
Q 012988 80 RHKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTE 159 (452)
Q Consensus 80 ~~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~ 159 (452)
.+++...+..+..+||.|-||.||.+.+++-.-.||||.++.+. -.++.|..|+.+|+.++|||+|+|+++|..+.
T Consensus 261 kWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt----MeveEFLkEAAvMKeikHpNLVqLLGVCT~Ep 336 (1157)
T KOG4278|consen 261 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEP 336 (1157)
T ss_pred hhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc----hhHHHHHHHHHHHHhhcCccHHHHhhhhccCC
Confidence 46666778888999999999999999999888899999987653 34678999999999999999999999999999
Q ss_pred eEEEEEeecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCC
Q 012988 160 YLYLIMEYLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLD 237 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~ 237 (452)
.+|||+|||..|+|.+||..- ..++.-...+++.||.+|++||..+++|||||...|.|+.++..+|++||||++.+.
T Consensus 337 PFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMt 416 (1157)
T KOG4278|consen 337 PFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMT 416 (1157)
T ss_pred CeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhc
Confidence 999999999999999999763 357777788899999999999999999999999999999999999999999999875
Q ss_pred CCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccch
Q 012988 238 CSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECD 317 (452)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~D 317 (452)
..+..+.. ..--...|.|||-+....++.++|
T Consensus 417 gDTYTAHA------------------------------------------------GAKFPIKWTAPEsLAyNtFSiKSD 448 (1157)
T KOG4278|consen 417 GDTYTAHA------------------------------------------------GAKFPIKWTAPESLAYNTFSIKSD 448 (1157)
T ss_pred CCceeccc------------------------------------------------CccCcccccCcccccccccccchh
Confidence 33221110 011235799999999999999999
Q ss_pred hhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHH
Q 012988 318 WWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQI 389 (452)
Q Consensus 318 iwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~ei 389 (452)
||+|||+|||+.| |-.||.+-+....+.-+.+ .+.+..+..|++....|++.|++ .|.+|| ++.||
T Consensus 449 VWAFGVLLWEIATYGMsPYPGidlSqVY~LLEk---gyRM~~PeGCPpkVYeLMraCW~WsPsDRP---sFaei 516 (1157)
T KOG4278|consen 449 VWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEK---GYRMDGPEGCPPKVYELMRACWNWSPSDRP---SFAEI 516 (1157)
T ss_pred hHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhc---cccccCCCCCCHHHHHHHHHHhcCCcccCc---cHHHH
Confidence 9999999999997 8999999888777766554 23333345899999999999999 999999 55544
No 391
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-37 Score=310.58 Aligned_cols=255 Identities=23% Similarity=0.343 Sum_probs=221.8
Q ss_pred CCCCCCCeeEeceeccCCCeEEEEEEEccCC---CEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEc
Q 012988 81 HKICVDDFELLTIIGRGAFGEVRLCREKKSG---NIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQD 157 (452)
Q Consensus 81 ~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~ 157 (452)
.++......|.++||.|.||.|+.|+.+..| ..||||.++... ...+...|..|+.||-+.+||||++|.++...
T Consensus 624 kEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy--tekqrrdFL~EAsIMGQFdHPNIIrLEGVVTk 701 (996)
T KOG0196|consen 624 KEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIRLEGVVTK 701 (996)
T ss_pred hhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc--cHHHHhhhhhhhhhcccCCCCcEEEEEEEEec
Confidence 3566677889999999999999999998766 469999998664 34456789999999999999999999999999
Q ss_pred CCeEEEEEeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccC
Q 012988 158 TEYLYLIMEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPL 236 (452)
Q Consensus 158 ~~~~~lV~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~ 236 (452)
...+.||.|||++|+|..+|+.+ +.|+..+...+++.|+.|+.||-+.|+|||||...|||++++...|++||||++.+
T Consensus 702 s~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvl 781 (996)
T KOG0196|consen 702 SKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL 781 (996)
T ss_pred CceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeec
Confidence 99999999999999999999775 67898999999999999999999999999999999999999999999999999977
Q ss_pred CCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhcccccccccc--CCccccchhccCCCCCc
Q 012988 237 DCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVG--TPDYIAPEVLLKKGYGM 314 (452)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G--t~~y~APE~~~~~~~~~ 314 (452)
..... ...++.-| ...|.|||.+....++.
T Consensus 782 edd~~------------------------------------------------~~ytt~GGKIPiRWTAPEAIa~RKFTs 813 (996)
T KOG0196|consen 782 EDDPE------------------------------------------------AAYTTLGGKIPIRWTAPEAIAYRKFTS 813 (996)
T ss_pred ccCCC------------------------------------------------ccccccCCccceeecChhHhhhcccCc
Confidence 43210 00011112 35799999999999999
Q ss_pred cchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhc
Q 012988 315 ECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 315 ~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~ 391 (452)
++||||+||+|||.++ |..||...++.+.++.|.. ...+|.+..++..+-+|+..|++ |-..|| .+.||..
T Consensus 814 ASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~---gyRLPpPmDCP~aL~qLMldCWqkdR~~RP---~F~qiV~ 886 (996)
T KOG0196|consen 814 ASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQ---GYRLPPPMDCPAALYQLMLDCWQKDRNRRP---KFAQIVS 886 (996)
T ss_pred hhhccccceEEEEecccCCCcccccchHHHHHHHHh---ccCCCCCCCCcHHHHHHHHHHHHHHhhcCC---CHHHHHH
Confidence 9999999999999775 9999999999999999975 45667777899999999999998 999999 8888875
No 392
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=2e-37 Score=313.96 Aligned_cols=245 Identities=29% Similarity=0.392 Sum_probs=194.1
Q ss_pred eceeccCCCeE-EEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEEcCCeEEEEEeec
Q 012988 91 LTIIGRGAFGE-VRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQDTEYLYLIMEYL 168 (452)
Q Consensus 91 ~~~LG~G~~g~-V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~~~~lV~E~~ 168 (452)
-+.+|.|+-|+ ||+|.. .|+.||||.+-.. .....++|+..|+.- +|||||++|+.-++.++.||..|.|
T Consensus 514 ~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC 585 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVY--EGREVAVKRLLEE------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC 585 (903)
T ss_pred HHHcccCCCCcEEEEEee--CCceehHHHHhhH------hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence 45789999875 787764 5889999987543 234678999999998 5999999999999999999999999
Q ss_pred CCCChHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECC---CC--cEEEeeccCCccCCCC
Q 012988 169 PGGDMMTLLMREDT----LTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDK---NG--HMKLSDFGLCKPLDCS 239 (452)
Q Consensus 169 ~ggsL~~~l~~~~~----~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~---~g--~ikl~DFGla~~~~~~ 239 (452)
..+|.+++..... ......+..+.|++.||++||+.+||||||||.||||+. ++ .++|+|||+++.+..+
T Consensus 586 -~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~ 664 (903)
T KOG1027|consen 586 -ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGG 664 (903)
T ss_pred -hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCC
Confidence 6799999976311 111345778999999999999999999999999999986 34 6899999999988644
Q ss_pred cchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhh
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWW 319 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Diw 319 (452)
.... ....+..||-+|+|||++....-+.++|||
T Consensus 665 ~sS~----------------------------------------------~r~s~~sGt~GW~APE~L~~~~~~~avDiF 698 (903)
T KOG1027|consen 665 KSSF----------------------------------------------SRLSGGSGTSGWQAPEQLREDRKTQAVDIF 698 (903)
T ss_pred cchh----------------------------------------------hcccCCCCcccccCHHHHhccccCcccchh
Confidence 2111 113456799999999999998888999999
Q ss_pred hhhHHHHHhhhC-CCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcC
Q 012988 320 SLGAIMYEMLVG-YPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFK 396 (452)
Q Consensus 320 SlGvil~elltG-~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~ 396 (452)
||||++|+.++| ..||...- +...+|+.....+..-.+ ....++.|||.+||. +|..|| +|.+||.||||-
T Consensus 699 slGCvfyYvltgG~HpFGd~~--~R~~NIl~~~~~L~~L~~-~~d~eA~dLI~~ml~~dP~~RP---sa~~VL~HPlFW 771 (903)
T KOG1027|consen 699 SLGCVFYYVLTGGSHPFGDSL--ERQANILTGNYTLVHLEP-LPDCEAKDLISRMLNPDPQLRP---SATDVLNHPLFW 771 (903)
T ss_pred hcCceEEEEecCCccCCCchH--HhhhhhhcCccceeeecc-CchHHHHHHHHHhcCCCcccCC---CHHHHhCCCccC
Confidence 999999999986 89996443 333456654333321111 111299999999999 999999 999999999996
No 393
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=262.39 Aligned_cols=216 Identities=28% Similarity=0.485 Sum_probs=179.3
Q ss_pred CCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHH-hCCCceeeEEEEEEcCC
Q 012988 81 HKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAE-VASHCIVKLYYSFQDTE 159 (452)
Q Consensus 81 ~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~-l~hp~iv~l~~~~~~~~ 159 (452)
.++..++..-+..||+|+||.|-+.++..+|...|+|.+...- ......+..+|+++..+ ...|++|++|+...++.
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv--n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg 118 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV--NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREG 118 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc--ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccc
Confidence 4555667777889999999999999999999999999986542 23344567778776555 47999999999999999
Q ss_pred eEEEEEeecCCCChHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCCCcEEECCCCcEEEeeccCCc
Q 012988 160 YLYLIMEYLPGGDMMTLL----MREDTLTENVARFYIAQSVLAIESIHKH-NYIHRDIKPDNLLLDKNGHMKLSDFGLCK 234 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l----~~~~~~~~~~~~~~~~ql~~aL~~LH~~-givHrDlkp~NILl~~~g~ikl~DFGla~ 234 (452)
.+++.||.| ..||..+. ..++.++|..+-.++..++.||.|||++ .|||||+||+||||+.+|++||||||.+-
T Consensus 119 dvwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG 197 (282)
T KOG0984|consen 119 DVWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISG 197 (282)
T ss_pred cEEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccce
Confidence 999999999 45666553 4567899999999999999999999986 89999999999999999999999999987
Q ss_pred cCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC----C
Q 012988 235 PLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK----K 310 (452)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~----~ 310 (452)
.+..+... +--.|-..|||||.+.. .
T Consensus 198 ~L~dSiAk--------------------------------------------------t~daGCkpYmaPEri~~e~n~~ 227 (282)
T KOG0984|consen 198 YLVDSIAK--------------------------------------------------TMDAGCKPYMAPERINPELNQK 227 (282)
T ss_pred eehhhhHH--------------------------------------------------HHhcCCCccCChhhcCcccCcc
Confidence 76433210 11357788999999863 5
Q ss_pred CCCccchhhhhhHHHHHhhhCCCCCCC-CChHHHHHHHhh
Q 012988 311 GYGMECDWWSLGAIMYEMLVGYPPFYA-DDPITTCRKIVH 349 (452)
Q Consensus 311 ~~~~~~DiwSlGvil~elltG~~Pf~~-~~~~~~~~~i~~ 349 (452)
+|+.++||||||+.++||.+++.||.. .++.+.+.+++.
T Consensus 228 gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVe 267 (282)
T KOG0984|consen 228 GYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE 267 (282)
T ss_pred cceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhc
Confidence 799999999999999999999999964 567777777775
No 394
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=100.00 E-value=4.3e-36 Score=284.40 Aligned_cols=294 Identities=22% Similarity=0.386 Sum_probs=207.8
Q ss_pred CCCeeEeceeccCCCeEEEEEEEcc---CCCEEEEEEeecchhcccchHHHHHHHHHHHHHhC-CCceeeEEEEEEcCCe
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKK---SGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVA-SHCIVKLYYSFQDTEY 160 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~~~~~ 160 (452)
.+.|.++.+||.|+|++||+|.+.. ....||+|.+.... ...++.+|+++|..+. +.||+++.+++..++.
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-----~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~ 109 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-----SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ 109 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-----CchHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence 4678999999999999999999877 78899999886543 2356889999999994 8899999999999999
Q ss_pred EEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECC-CCcEEEeeccCCccCCCC
Q 012988 161 LYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDK-NGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 161 ~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~-~g~ikl~DFGla~~~~~~ 239 (452)
+++||||++..+..+++. .++...++.|++.++.||.++|.+|||||||||.|+|.+. .+.-.|+|||||...+..
T Consensus 110 v~ivlp~~~H~~f~~l~~---~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~ 186 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLYR---SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGY 186 (418)
T ss_pred eEEEecccCccCHHHHHh---cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhh
Confidence 999999999999888874 4668889999999999999999999999999999999985 467899999999842211
Q ss_pred cchhhccccccCccccCCCCCCCCCCCC-CCCCCCCCCchhHHHHhh----hhccccccccccCCccccchhccC-CCCC
Q 012988 240 TLYAIHEHKTIDDENMAEPMDIDGCFPD-TDNKSSWKSPHEQLQHWQ----MNRRKLAFSTVGTPDYIAPEVLLK-KGYG 313 (452)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~Gt~~y~APE~~~~-~~~~ 313 (452)
........ .... ....+.|.... ....+ .....++. ..++.......||++|+|||++.. ...+
T Consensus 187 ~~~~~s~~--~~~~---~~~~~~g~~~~~~~~~~-----~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qt 256 (418)
T KOG1167|consen 187 QQTEHSRS--YSGR---HATPAMGKDVHCQSVAT-----ASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQT 256 (418)
T ss_pred hhhhhhhh--hhcc---cCCccccCccccccccc-----ccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcC
Confidence 10000000 0000 00000010000 00000 00000000 112233446789999999999986 5569
Q ss_pred ccchhhhhhHHHHHhhhCCCCCCCC-ChHHHHHHHhh-------------------cc-C-------------cc-----
Q 012988 314 MECDWWSLGAIMYEMLVGYPPFYAD-DPITTCRKIVH-------------------WR-N-------------HL----- 354 (452)
Q Consensus 314 ~~~DiwSlGvil~elltG~~Pf~~~-~~~~~~~~i~~-------------------~~-~-------------~~----- 354 (452)
.++||||.|||+.-++++..||... ++...+..|.. |. . .+
T Consensus 257 taiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~ 336 (418)
T KOG1167|consen 257 TAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESI 336 (418)
T ss_pred CccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhc
Confidence 9999999999999999999998643 22222222211 10 0 00
Q ss_pred --------cC-CCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCCC
Q 012988 355 --------KF-PDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDVV 399 (452)
Q Consensus 355 --------~~-p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~~ 399 (452)
.. ......+..+.||+.+||. ||.+|+ +++++|+||||.+.+
T Consensus 337 ~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRi---tAEeALkHpFF~~~~ 388 (418)
T KOG1167|consen 337 YKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRI---TAEDALKHPFFDEAD 388 (418)
T ss_pred ccccccceeeccccccccHHHHHHHHHHccCChhhcc---cHHHHhcCcCCcchh
Confidence 00 0011245689999999999 999999 999999999998543
No 395
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4.5e-35 Score=326.56 Aligned_cols=239 Identities=20% Similarity=0.257 Sum_probs=185.5
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
.|.....||+|+||.||+|..+.++..||+|++..... ....|+.+++.++|||||++++++.+.+..|+|||
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~E 763 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-------IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHE 763 (968)
T ss_pred hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-------ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEe
Confidence 45667889999999999999999999999998864321 11346888999999999999999999999999999
Q ss_pred ecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 167 YLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIH---KHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 167 ~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH---~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
|+++|+|.+++. .+++.....++.|++.||+||| +.+|+||||||+|||++.++..++. ||.+.....
T Consensus 764 y~~~g~L~~~l~---~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~----- 834 (968)
T PLN00113 764 YIEGKNLSEVLR---NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT----- 834 (968)
T ss_pred CCCCCcHHHHHh---cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc-----
Confidence 999999999995 3788899999999999999999 6699999999999999999988876 665442210
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhH
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 323 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGv 323 (452)
.....||+.|+|||++.+..++.++|||||||
T Consensus 835 ------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gv 866 (968)
T PLN00113 835 ------------------------------------------------DTKCFISSAYVAPETRETKDITEKSDIYGFGL 866 (968)
T ss_pred ------------------------------------------------CCCccccccccCcccccCCCCCcccchhhHHH
Confidence 01236889999999999999999999999999
Q ss_pred HHHHhhhCCCCCCCCCh----HHHHHHH-hh------ccCccc---CCCCCCCChhHHHHHHHhhc-CccccCCCCCHHH
Q 012988 324 IMYEMLVGYPPFYADDP----ITTCRKI-VH------WRNHLK---FPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQ 388 (452)
Q Consensus 324 il~elltG~~Pf~~~~~----~~~~~~i-~~------~~~~~~---~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~e 388 (452)
++|||++|+.||..... ....... .. +..... .+.......++.+++.+|+. ||.+|| ++.+
T Consensus 867 vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP---t~~e 943 (968)
T PLN00113 867 ILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARP---CAND 943 (968)
T ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCc---CHHH
Confidence 99999999999853211 1111110 00 000000 00000112356789999998 999999 8998
Q ss_pred HhcC
Q 012988 389 IKAH 392 (452)
Q Consensus 389 il~h 392 (452)
+++.
T Consensus 944 vl~~ 947 (968)
T PLN00113 944 VLKT 947 (968)
T ss_pred HHHH
Confidence 8753
No 396
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6e-35 Score=294.36 Aligned_cols=246 Identities=19% Similarity=0.257 Sum_probs=201.8
Q ss_pred eEeceeccCCCeEEEEEEEccCCC----EEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 89 ELLTIIGRGAFGEVRLCREKKSGN----IYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 89 ~i~~~LG~G~~g~V~~a~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
...++||+|+||+||+|.+-..|+ +||+|++..... ......+..|+-+|..++|||++++++++.... +.||
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~--~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlv 775 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTS--PKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLV 775 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCC--chhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHH
Confidence 346799999999999999876654 689998876543 333567889999999999999999999998766 8899
Q ss_pred EeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 165 MEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 165 ~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
++|+++|.|.++++.+ ..+-......|..||+.|+.|||.+++|||||...|||+.+-.++||+|||+|+.+.......
T Consensus 776 tq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey 855 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEY 855 (1177)
T ss_pred HHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccc
Confidence 9999999999999764 578888899999999999999999999999999999999999999999999999875321110
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhH
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 323 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGv 323 (452)
. +....-.+.|||-|.+....|++++|||||||
T Consensus 856 ~-----------------------------------------------~~~gK~pikwmale~i~~~~~thqSDVWsfGV 888 (1177)
T KOG1025|consen 856 S-----------------------------------------------APGGKVPIKWMALESIRIRKYTHQSDVWSFGV 888 (1177)
T ss_pred c-----------------------------------------------ccccccCcHHHHHHHhhccCCCchhhhhhhhh
Confidence 0 00112245799999999999999999999999
Q ss_pred HHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHh
Q 012988 324 IMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIK 390 (452)
Q Consensus 324 il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil 390 (452)
++||++| |..|+.+....++-. ++.....+ +.++.++-++.-++.+|+. |+..|| +++++.
T Consensus 889 tiWElmTFGa~Py~gi~~~eI~d-lle~geRL--sqPpiCtiDVy~~mvkCwmid~~~rp---~fkel~ 951 (1177)
T KOG1025|consen 889 TIWELMTFGAKPYDGIPAEEIPD-LLEKGERL--SQPPICTIDVYMVMVKCWMIDADSRP---TFKELA 951 (1177)
T ss_pred hHHHHHhcCCCccCCCCHHHhhH-HHhccccC--CCCCCccHHHHHHHHHHhccCcccCc---cHHHHH
Confidence 9999997 999998877655544 44433444 4445899999999999998 999999 555543
No 397
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=6.5e-36 Score=309.82 Aligned_cols=268 Identities=40% Similarity=0.710 Sum_probs=215.6
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEE
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYL 163 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~l 163 (452)
.-++|..|+.|..|+||.||+++++.+.+.+|+| +++..+.-+ +|+.....|++|
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~lilR----------nilt~a~npfvv-------------- 135 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNLILR----------NILTFAGNPFVV-------------- 135 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhc-ccccchhhh----------ccccccCCccee--------------
Confidence 3478999999999999999999999999999994 554432221 144444556555
Q ss_pred EEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchh
Q 012988 164 IMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYA 243 (452)
Q Consensus 164 V~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~ 243 (452)
|+-..+++.-+.++.+. +.+++|||+.||+|||+||+|.||..=|++|++|||+++.........
T Consensus 136 -------gDc~tllk~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn 200 (1205)
T KOG0606|consen 136 -------GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN 200 (1205)
T ss_pred -------chhhhhcccCCCCcchh--------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccch
Confidence 66677776666666544 789999999999999999999999999999999999998653221111
Q ss_pred hccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhH
Q 012988 244 IHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 323 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGv 323 (452)
..+.-. .... +.-.....||||.|.|||++...+|+..+|||++|+
T Consensus 201 l~eg~I-------------------------~k~t---------~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGi 246 (1205)
T KOG0606|consen 201 LKEGHI-------------------------EKDT---------HEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGI 246 (1205)
T ss_pred hhhcch-------------------------HHHH---------HHhhhccccCCccccChhhhhhhccCCCccHHHHHH
Confidence 111000 0000 111123568999999999999999999999999999
Q ss_pred HHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCC-CCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCCCcc
Q 012988 324 IMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPD-DSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDVVWD 401 (452)
Q Consensus 324 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~~~~ 401 (452)
|+||.+.|+.||.++.+++.+..++. ..+.+|+ ...+.++++++|.+||. +|..|.+++++.++++|+||..+||.
T Consensus 247 IlyeFLVgcvpffGdtpeelfg~vis--d~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~ 324 (1205)
T KOG0606|consen 247 ILYEFLVGCVPFFGDTPEELFGQVIS--DDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWK 324 (1205)
T ss_pred HHHHHheeeeeccCCCHHHHHhhhhh--hhccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccc
Confidence 99999999999999999999998887 4444544 24678999999999998 99999999999999999999999999
Q ss_pred ccccCCCCccccCCCCccCCCCCCCC
Q 012988 402 KLYEMEAAFKPEINGELDTQNFMKFD 427 (452)
Q Consensus 402 ~l~~~~~~~~p~~~~~~~~~~~~~~~ 427 (452)
.|......|+|.+..+.|+++|++-.
T Consensus 325 ~llRqkaefvpql~~eddtsyfdTRs 350 (1205)
T KOG0606|consen 325 SLLRQKAEFVPQLESEDDTSYFDTRS 350 (1205)
T ss_pred hhhhhhccccccccccccchhhcccc
Confidence 99999999999999999999998643
No 398
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-36 Score=298.95 Aligned_cols=260 Identities=28% Similarity=0.479 Sum_probs=224.4
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEE
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLY 162 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~ 162 (452)
...++|+++..+|.|+||.||+|+++.+++..|+|+++.. ..+...-++.|+-+++..+|||||-+++.+...+.++
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLe---p~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklw 88 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLE---PGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLW 88 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeecc---CCccccccccceeeeecCCCcChHHHHhhhhhhcCcE
Confidence 4568999999999999999999999999999999999754 3345567888999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcch
Q 012988 163 LIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLY 242 (452)
Q Consensus 163 lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~ 242 (452)
++||||.||+|.+..+-.+++++.++.+.+++.+.||+|||+.|-+|||||-.|||+++.|.+|++|||.+..+....
T Consensus 89 icMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati-- 166 (829)
T KOG0576|consen 89 ICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATI-- 166 (829)
T ss_pred EEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhh--
Confidence 999999999999998888999999999999999999999999999999999999999999999999999987653211
Q ss_pred hhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhcc---CCCCCccchhh
Q 012988 243 AIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLL---KKGYGMECDWW 319 (452)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~---~~~~~~~~Diw 319 (452)
....++.|||.|||||+.. .++|+..+|||
T Consensus 167 -----------------------------------------------~KrksfiGtpywmapEvaaverkggynqlcdiw 199 (829)
T KOG0576|consen 167 -----------------------------------------------AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIW 199 (829)
T ss_pred -----------------------------------------------hhhhcccCCccccchhHHHHHhccccccccccc
Confidence 1123678999999999864 57899999999
Q ss_pred hhhHHHHHhhhCCCCCCCCChHHHHHHHhh-ccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 320 SLGAIMYEMLVGYPPFYADDPITTCRKIVH-WRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 320 SlGvil~elltG~~Pf~~~~~~~~~~~i~~-~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
++|+...|+---++|-...-+...+.-..+ .-.++...+....++.+-+|++..|. +|.+|| +++-+|.|||...
T Consensus 200 a~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRp---taeklL~h~fvs~ 276 (829)
T KOG0576|consen 200 ALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRP---TAEKLLQHPFVSQ 276 (829)
T ss_pred ccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCC---Chhhheeceeecc
Confidence 999999999988888777666665544433 12233333444678999999999998 999999 9999999999975
No 399
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-34 Score=276.91 Aligned_cols=243 Identities=23% Similarity=0.348 Sum_probs=193.8
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHH--hCCCceeeEEEEEEcCC---
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAE--VASHCIVKLYYSFQDTE--- 159 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~--l~hp~iv~l~~~~~~~~--- 159 (452)
....+++..||+|.||.||+|+. +++.||||++... ..+.+.+|.+|.+. ++|+||++++++-....
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~------~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~ 280 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQ------EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADR 280 (534)
T ss_pred CCchhhHHHhhcCccceeehhhc--cCceeEEEecCHH------HHHHHHhHHHHHhccCccchhHHHhhchhccCCccc
Confidence 45677889999999999999865 4799999998643 34668889998876 58999999998876554
Q ss_pred -eEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---------CeeecCCCCCcEEECCCCcEEEee
Q 012988 160 -YLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKH---------NYIHRDIKPDNLLLDKNGHMKLSD 229 (452)
Q Consensus 160 -~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~---------givHrDlkp~NILl~~~g~ikl~D 229 (452)
.+.||++|.+.|+|.++|. ...++......++..++.||+|||+. .|+|||||..||||.+|++..|+|
T Consensus 281 ~eywLVt~fh~kGsL~dyL~-~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaD 359 (534)
T KOG3653|consen 281 MEYWLVTEFHPKGSLCDYLK-ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIAD 359 (534)
T ss_pred cceeEEeeeccCCcHHHHHH-hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeec
Confidence 7999999999999999995 46789999999999999999999963 499999999999999999999999
Q ss_pred ccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC
Q 012988 230 FGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK 309 (452)
Q Consensus 230 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~ 309 (452)
||||..+..+.. ...+...+||..|||||++.+
T Consensus 360 FGLAl~~~p~~~-----------------------------------------------~~d~~~qVGT~RYMAPEvLEg 392 (534)
T KOG3653|consen 360 FGLALRLEPGKP-----------------------------------------------QGDTHGQVGTRRYMAPEVLEG 392 (534)
T ss_pred cceeEEecCCCC-----------------------------------------------CcchhhhhhhhhhcCHHHHhh
Confidence 999998753211 111234789999999999976
Q ss_pred C-CCC-----ccchhhhhhHHHHHhhhCCC------------CCC-----CCChHHHHHHHhhccCcccCCCCC---CCC
Q 012988 310 K-GYG-----MECDWWSLGAIMYEMLVGYP------------PFY-----ADDPITTCRKIVHWRNHLKFPDDS---KLS 363 (452)
Q Consensus 310 ~-~~~-----~~~DiwSlGvil~elltG~~------------Pf~-----~~~~~~~~~~i~~~~~~~~~p~~~---~~s 363 (452)
. .+. .+.||||+|.+||||+++.. ||. ..+-.++...++..+..+.+|+.. .--
T Consensus 393 ainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~ 472 (534)
T KOG3653|consen 393 AINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGM 472 (534)
T ss_pred hcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccH
Confidence 2 222 36899999999999998643 332 233455556666667777777531 123
Q ss_pred hhHHHHHHHhhc-CccccCCC
Q 012988 364 PEAKDLICRLLC-DVEHRLGT 383 (452)
Q Consensus 364 ~~~~dLi~~mL~-dp~~R~~~ 383 (452)
..+++.|..|+. |++.|+++
T Consensus 473 ~~l~et~EeCWDhDaeARLTA 493 (534)
T KOG3653|consen 473 AVLCETIEECWDHDAEARLTA 493 (534)
T ss_pred HHHHHHHHHHcCCchhhhhhh
Confidence 667889999998 99999954
No 400
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-33 Score=296.93 Aligned_cols=256 Identities=26% Similarity=0.379 Sum_probs=208.9
Q ss_pred cCCCCCCCeeEeceeccCCCeEEEEEEEcc---C----CCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeE
Q 012988 80 RHKICVDDFELLTIIGRGAFGEVRLCREKK---S----GNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKL 151 (452)
Q Consensus 80 ~~~~~~~~y~i~~~LG~G~~g~V~~a~~~~---~----~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l 151 (452)
.+++..++..+.+.||+|+||+|++|.... . ...||||.++..... .+.+.+..|+.+|+.+ .|+||+.+
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~--~~~~~~~~El~~m~~~g~H~niv~l 367 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS--SEKKDLMSELNVLKELGKHPNIVNL 367 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc--HHHHHHHHHHHHHHHhcCCcchhhh
Confidence 456666677788899999999999997542 1 456999988765432 5567899999999999 59999999
Q ss_pred EEEEEcCCeEEEEEeecCCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCC
Q 012988 152 YYSFQDTEYLYLIMEYLPGGDMMTLLMRED----------------TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPD 215 (452)
Q Consensus 152 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~----------------~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~ 215 (452)
++++...+.+++|+||+..|+|..++...+ .++......++.||+.|++||++.++|||||...
T Consensus 368 lG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaR 447 (609)
T KOG0200|consen 368 LGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAAR 447 (609)
T ss_pred eeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhh
Confidence 999999999999999999999999997655 3888889999999999999999999999999999
Q ss_pred cEEECCCCcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhcccccccc
Q 012988 216 NLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFST 295 (452)
Q Consensus 216 NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (452)
|||+..+..+||+|||+|+.......+.. ...
T Consensus 448 NVLi~~~~~~kIaDFGlar~~~~~~~y~~------------------------------------------------~~~ 479 (609)
T KOG0200|consen 448 NVLITKNKVIKIADFGLARDHYNKDYYRT------------------------------------------------KSS 479 (609)
T ss_pred hEEecCCCEEEEccccceeccCCCCceEe------------------------------------------------cCC
Confidence 99999999999999999996543221110 011
Q ss_pred cc--CCccccchhccCCCCCccchhhhhhHHHHHhhh-CCCCCCCCC-hHHHHHHHhhccCcccCCCCCCCChhHHHHHH
Q 012988 296 VG--TPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV-GYPPFYADD-PITTCRKIVHWRNHLKFPDDSKLSPEAKDLIC 371 (452)
Q Consensus 296 ~G--t~~y~APE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~-~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~ 371 (452)
.| ...|||||.+....|+.++||||+||+|||+++ |..||.+-. ..+.+..+ .....+..|. .+++++.++++
T Consensus 480 ~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l-~~G~r~~~P~--~c~~eiY~iM~ 556 (609)
T KOG0200|consen 480 AGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFL-KEGNRMEQPE--HCSDEIYDLMK 556 (609)
T ss_pred CCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHH-hcCCCCCCCC--CCCHHHHHHHH
Confidence 12 235999999999999999999999999999998 889998754 44444433 3334455554 78999999999
Q ss_pred Hhhc-CccccCCCCCHHHHhc
Q 012988 372 RLLC-DVEHRLGTGGAHQIKA 391 (452)
Q Consensus 372 ~mL~-dp~~R~~~~~~~eil~ 391 (452)
.|+. +|.+|| ++.++.+
T Consensus 557 ~CW~~~p~~RP---~F~~~~~ 574 (609)
T KOG0200|consen 557 SCWNADPEDRP---TFSECVE 574 (609)
T ss_pred HHhCCCcccCC---CHHHHHH
Confidence 9999 999999 7777663
No 401
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-33 Score=264.25 Aligned_cols=250 Identities=25% Similarity=0.357 Sum_probs=186.0
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHH--hCCCceeeEEEEEEcCC--
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAE--VASHCIVKLYYSFQDTE-- 159 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~--l~hp~iv~l~~~~~~~~-- 159 (452)
...+.++++.||+|-||.||+|.++ |+.||||++...+ .....+|.+|.+. |+|+||..+++.-..+.
T Consensus 209 iarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srd------E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs 280 (513)
T KOG2052|consen 209 IARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRD------ERSWFRETEIYQTVMLRHENILGFIAADNKDNGS 280 (513)
T ss_pred hhheeEEEEEecCccccceeecccc--CCceEEEEecccc------hhhhhhHHHHHHHHHhccchhhhhhhccccCCCc
Confidence 3467899999999999999999876 8999999986442 2345667777765 59999999998754332
Q ss_pred --eEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeecCCCCCcEEECCCCcEEEee
Q 012988 160 --YLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKH--------NYIHRDIKPDNLLLDKNGHMKLSD 229 (452)
Q Consensus 160 --~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~--------givHrDlkp~NILl~~~g~ikl~D 229 (452)
.++||.+|.+.|||+++|.+ ..++.+....++..++.||++||.. .|.|||||..|||+.++|...|+|
T Consensus 281 ~TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IAD 359 (513)
T KOG2052|consen 281 WTQLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 359 (513)
T ss_pred eEEEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEee
Confidence 58999999999999999976 6788899999999999999999953 499999999999999999999999
Q ss_pred ccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC
Q 012988 230 FGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK 309 (452)
Q Consensus 230 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~ 309 (452)
+|||-........ ++ ......+||..|||||++-.
T Consensus 360 LGLAv~h~~~t~~----------------id-----------------------------i~~N~rVGTKRYMAPEvLde 394 (513)
T KOG2052|consen 360 LGLAVRHDSDTDT----------------ID-----------------------------IPPNPRVGTKRYMAPEVLDE 394 (513)
T ss_pred ceeeEEecccCCc----------------cc-----------------------------CCCCCccceeeccChHHhhh
Confidence 9999876432110 00 11235789999999999864
Q ss_pred C----CC-C-ccchhhhhhHHHHHhhhC----------CCCCCC-----CChHHHHHHHhhccCcccCCCCCCCCh---h
Q 012988 310 K----GY-G-MECDWWSLGAIMYEMLVG----------YPPFYA-----DDPITTCRKIVHWRNHLKFPDDSKLSP---E 365 (452)
Q Consensus 310 ~----~~-~-~~~DiwSlGvil~elltG----------~~Pf~~-----~~~~~~~~~i~~~~~~~~~p~~~~~s~---~ 365 (452)
. .+ + ..+||||||.++||+..+ .+||.+ .+.+++..-+...+..+.+|....-.+ .
T Consensus 395 tin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~ 474 (513)
T KOG2052|consen 395 TINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRV 474 (513)
T ss_pred hcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHH
Confidence 2 12 2 368999999999999863 468764 222333222222333444444322223 3
Q ss_pred HHHHHHHhhc-CccccCCCCCHHHHh
Q 012988 366 AKDLICRLLC-DVEHRLGTGGAHQIK 390 (452)
Q Consensus 366 ~~dLi~~mL~-dp~~R~~~~~~~eil 390 (452)
+..|++.|+. ||..|+ ++--|+
T Consensus 475 m~klMkeCW~~Np~aRl---tALriK 497 (513)
T KOG2052|consen 475 MAKLMKECWYANPAARL---TALRIK 497 (513)
T ss_pred HHHHHHHhhcCCchhhh---HHHHHH
Confidence 4467888887 999999 555444
No 402
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=100.00 E-value=1.4e-31 Score=246.81 Aligned_cols=211 Identities=43% Similarity=0.681 Sum_probs=180.2
Q ss_pred eeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEee
Q 012988 88 FELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEY 167 (452)
Q Consensus 88 y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~ 167 (452)
|.+.+.||.|++|.||++....++..+|+|.+...... .....+.+|+..++.++|+|++++++++......++++||
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence 56788999999999999999988999999998765322 2456788899999999999999999999999999999999
Q ss_pred cCCCChHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhcc
Q 012988 168 LPGGDMMTLLMREDT-LTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHE 246 (452)
Q Consensus 168 ~~ggsL~~~l~~~~~-~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~ 246 (452)
+++++|.+++..... +++..+..++.+++.+|.+||+.|++|+||+|.||+++.++.++|+|||++........
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~----- 153 (225)
T smart00221 79 CEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA----- 153 (225)
T ss_pred cCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc-----
Confidence 999999999987666 89999999999999999999999999999999999999999999999999886532110
Q ss_pred ccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhc-cCCCCCccchhhhhhHHH
Q 012988 247 HKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVL-LKKGYGMECDWWSLGAIM 325 (452)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~-~~~~~~~~~DiwSlGvil 325 (452)
.......++..|++||++ ....++.++|+||||+++
T Consensus 154 -------------------------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~ 190 (225)
T smart00221 154 -------------------------------------------ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVIL 190 (225)
T ss_pred -------------------------------------------ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHH
Confidence 001134678899999998 667788899999999999
Q ss_pred HHhhhCCCCCCC-CChH-HHHHHHh
Q 012988 326 YEMLVGYPPFYA-DDPI-TTCRKIV 348 (452)
Q Consensus 326 ~elltG~~Pf~~-~~~~-~~~~~i~ 348 (452)
++|++|+.||.. .++. .....+.
T Consensus 191 ~~l~~g~~pf~~~~~~~~~~~~~~~ 215 (225)
T smart00221 191 YELLWGPEPFSGEGEFTSLLSDVWS 215 (225)
T ss_pred HHHHHCCCCccccchhHHHHHHHHh
Confidence 999999999987 4444 4444443
No 403
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.98 E-value=6.1e-31 Score=238.84 Aligned_cols=211 Identities=45% Similarity=0.714 Sum_probs=185.0
Q ss_pred eccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeecCCCCh
Q 012988 94 IGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDM 173 (452)
Q Consensus 94 LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~ggsL 173 (452)
||.|++|.||++....+++.+++|++....... ....+.+|+.+++.+.|++|+++++++......+++||+++|++|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence 689999999999998889999999987653221 346788999999999999999999999999999999999999999
Q ss_pred HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECC-CCcEEEeeccCCccCCCCcchhhccccccC
Q 012988 174 MTLLMRE-DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDK-NGHMKLSDFGLCKPLDCSTLYAIHEHKTID 251 (452)
Q Consensus 174 ~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~-~g~ikl~DFGla~~~~~~~~~~~~~~~~~~ 251 (452)
.+++... ..++...+..++.+++.+|.+||+.|++|+||+|.||+++. ++.++|+|||.+........
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~---------- 148 (215)
T cd00180 79 KDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS---------- 148 (215)
T ss_pred HHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc----------
Confidence 9999765 57899999999999999999999999999999999999999 89999999999886532210
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC-CCCccchhhhhhHHHHHhhh
Q 012988 252 DENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK-GYGMECDWWSLGAIMYEMLV 330 (452)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~-~~~~~~DiwSlGvil~ellt 330 (452)
......+...|++||.+... .++.++|+|+||+++++|
T Consensus 149 ---------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-- 187 (215)
T cd00180 149 ---------------------------------------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-- 187 (215)
T ss_pred ---------------------------------------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--
Confidence 01124578889999999877 788999999999999999
Q ss_pred CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCC
Q 012988 331 GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHP 393 (452)
Q Consensus 331 G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp 393 (452)
..+.++|.+|+. ||.+|+ ++.++++|+
T Consensus 188 ---------------------------------~~~~~~l~~~l~~~p~~R~---~~~~l~~~~ 215 (215)
T cd00180 188 ---------------------------------PELKDLIRKMLQKDPEKRP---SAKEILEHL 215 (215)
T ss_pred ---------------------------------HHHHHHHHHHhhCCcccCc---CHHHHhhCC
Confidence 577899999998 999999 999999875
No 404
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.98 E-value=6.9e-33 Score=248.29 Aligned_cols=255 Identities=22% Similarity=0.372 Sum_probs=193.8
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEE-EEcCCeEE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYS-FQDTEYLY 162 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~-~~~~~~~~ 162 (452)
.+.|.|.+.||+|.||++-+|+++.++..+++|.+.+... .+..+.+|...--.| .|.||+.-|++ |+..+.++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t----t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT----TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV 98 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh----hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence 3679999999999999999999999999999999977643 345677787766666 47899988765 88889999
Q ss_pred EEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEEC-CC-CcEEEeeccCCccCCCCc
Q 012988 163 LIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLD-KN-GHMKLSDFGLCKPLDCST 240 (452)
Q Consensus 163 lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~-~~-g~ikl~DFGla~~~~~~~ 240 (452)
+++||+|.|+|.+-+.. ..+-|.-.+.++.|+++|+.|+|+.++||||||.+||||- .| ..+||||||+.+..+...
T Consensus 99 F~qE~aP~gdL~snv~~-~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV 177 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEA-AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTV 177 (378)
T ss_pred EeeccCccchhhhhcCc-ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCcee
Confidence 99999999999988754 4578888999999999999999999999999999999984 33 379999999987643111
Q ss_pred chhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC---CC--CCcc
Q 012988 241 LYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK---KG--YGME 315 (452)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~---~~--~~~~ 315 (452)
. ..--+..|.|||+... +. ..+.
T Consensus 178 ~----------------------------------------------------~~~~~~~y~~pe~~~~~~ne~~~~~ps 205 (378)
T KOG1345|consen 178 K----------------------------------------------------YLEYVNNYHAPELCDTVVNEKLVVNPS 205 (378)
T ss_pred h----------------------------------------------------hhhhhcccCCcHHHhhccccceEeccc
Confidence 0 1123456999998653 33 3778
Q ss_pred chhhhhhHHHHHhhhCCCCCCCCChH-HHHHHHhhccC--cccCCCC-CCCChhHHHHHHHhhc-CccccCCCCCHHHHh
Q 012988 316 CDWWSLGAIMYEMLVGYPPFYADDPI-TTCRKIVHWRN--HLKFPDD-SKLSPEAKDLICRLLC-DVEHRLGTGGAHQIK 390 (452)
Q Consensus 316 ~DiwSlGvil~elltG~~Pf~~~~~~-~~~~~i~~~~~--~~~~p~~-~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil 390 (452)
+|+|.||+++|.+|||.+||...... ..+-+...|.. ....|.. ..+|+.+..+.++-|. ++.+|--..++....
T Consensus 206 ~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~r 285 (378)
T KOG1345|consen 206 TDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMR 285 (378)
T ss_pred ccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence 99999999999999999999743211 12223333322 2233432 3578999999999998 888883211555555
Q ss_pred cCCCcC
Q 012988 391 AHPWFK 396 (452)
Q Consensus 391 ~hp~f~ 396 (452)
...|..
T Consensus 286 k~~w~E 291 (378)
T KOG1345|consen 286 KCLWKE 291 (378)
T ss_pred HHHHHH
Confidence 555654
No 405
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97 E-value=1.3e-31 Score=291.80 Aligned_cols=232 Identities=12% Similarity=0.125 Sum_probs=155.1
Q ss_pred hCC-CceeeEEEEE-------EcCCeEEEEEeecCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCC
Q 012988 143 VAS-HCIVKLYYSF-------QDTEYLYLIMEYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIK 213 (452)
Q Consensus 143 l~h-p~iv~l~~~~-------~~~~~~~lV~E~~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlk 213 (452)
+.| +||+.++++| .....++++||++ +++|.++|.. ...+++..++.++.||+.||.|||++||+|||||
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlK 107 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVR 107 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Confidence 445 5778888887 3334688889988 6799999965 3569999999999999999999999999999999
Q ss_pred CCcEEECCCCcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhcccccc
Q 012988 214 PDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAF 293 (452)
Q Consensus 214 p~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (452)
|+||||+..|.+|++|||++......... ...+.+-+......................+ ......
T Consensus 108 P~NiLl~~~~~~k~~d~~~~~~~~~~~~~----~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ 173 (793)
T PLN00181 108 PSCFVMSSFNHVSFIESASCSDSGSDEDA----TTKSREIGSSRREEILSERRIEKLEEVKKQP----------FPMKQI 173 (793)
T ss_pred chhEEEcccCcEEEeeccccCcccccccC----cccccccccccccccccccchhhhhccccCC----------Cccccc
Confidence 99999998888888888887654211000 0000000000000000000000000000000 000112
Q ss_pred ccccCCccccchhccCCCCCccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHh
Q 012988 294 STVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRL 373 (452)
Q Consensus 294 ~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~m 373 (452)
..+||+.|||||++.+..|+.++|||||||+||||++|.+|+.... .....+...... +......+.+.+++.+|
T Consensus 174 ~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 248 (793)
T PLN00181 174 LAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRVLP---PQILLNWPKEASFCLWL 248 (793)
T ss_pred ccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhhcC---hhhhhcCHHHHHHHHHh
Confidence 3579999999999999999999999999999999999999875432 122222211111 11112246678999999
Q ss_pred hc-CccccCCCCCHHHHhcCCCcCC
Q 012988 374 LC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 374 L~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
|. ||.+|| ++.|+++||||..
T Consensus 249 L~~~P~~Rp---s~~eil~h~~~~~ 270 (793)
T PLN00181 249 LHPEPSCRP---SMSELLQSEFINE 270 (793)
T ss_pred CCCChhhCc---ChHHHhhchhhhh
Confidence 99 999999 9999999999975
No 406
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.96 E-value=1.7e-29 Score=236.77 Aligned_cols=258 Identities=20% Similarity=0.268 Sum_probs=207.8
Q ss_pred hhcCCCCCCCeeEeceeccCCCeEEEEEEEccCC-----CEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEE
Q 012988 78 LKRHKICVDDFELLTIIGRGAFGEVRLCREKKSG-----NIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLY 152 (452)
Q Consensus 78 ~~~~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~ 152 (452)
++...+..+++++...+-+|+||.||.|.++... +.|-+|.++.. ...-++..+..|--.+..+.|||+..+.
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~--AS~iQv~~~L~es~lly~~sH~nll~V~ 353 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH--ASQIQVNLLLQESMLLYGASHPNLLSVL 353 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc--ccHHHHHHHHHHHHHHhcCcCCCcccee
Confidence 4455666788999999999999999999776433 33555655432 2334556778888888999999999999
Q ss_pred EEEE-cCCeEEEEEeecCCCChHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCC
Q 012988 153 YSFQ-DTEYLYLIMEYLPGGDMMTLLMR--------EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNG 223 (452)
Q Consensus 153 ~~~~-~~~~~~lV~E~~~ggsL~~~l~~--------~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g 223 (452)
++.. +....++++.++.-|+|..+|.. ...++..+...++.|++.|++|||..||||.||...|.+||+..
T Consensus 354 ~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~L 433 (563)
T KOG1024|consen 354 GVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQL 433 (563)
T ss_pred EEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhhe
Confidence 8864 45578899999999999999962 12466778888999999999999999999999999999999999
Q ss_pred cEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCcccc
Q 012988 224 HMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIA 303 (452)
Q Consensus 224 ~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~A 303 (452)
.+||+|=.+++.+-++...... + .--....||+
T Consensus 434 qVkltDsaLSRDLFP~DYhcLG---------------------D--------------------------nEnRPvkWMs 466 (563)
T KOG1024|consen 434 QVKLTDSALSRDLFPGDYHCLG---------------------D--------------------------NENRPVKWMS 466 (563)
T ss_pred eEEeccchhccccCcccccccC---------------------C--------------------------CCCCcccccC
Confidence 9999999999977433221100 0 1113457999
Q ss_pred chhccCCCCCccchhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccC
Q 012988 304 PEVLLKKGYGMECDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRL 381 (452)
Q Consensus 304 PE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~ 381 (452)
||.+.+..|+.++|+|||||+||||+| |+.|+..-++.++...+..+ ..+..| .++++++...+..|+. +|++||
T Consensus 467 lEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdG-yRlaQP--~NCPDeLf~vMacCWallpeeRP 543 (563)
T KOG1024|consen 467 LEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDG-YRLAQP--FNCPDELFTVMACCWALLPEERP 543 (563)
T ss_pred HHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhcc-ceecCC--CCCcHHHHHHHHHHHhcCcccCC
Confidence 999999999999999999999999998 99999999999988777653 444445 4899999999999999 999999
Q ss_pred CCCCHHHHh
Q 012988 382 GTGGAHQIK 390 (452)
Q Consensus 382 ~~~~~~eil 390 (452)
+++|+.
T Consensus 544 ---sf~Qlv 549 (563)
T KOG1024|consen 544 ---SFSQLV 549 (563)
T ss_pred ---CHHHHH
Confidence 888875
No 407
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=1.3e-30 Score=270.84 Aligned_cols=262 Identities=26% Similarity=0.388 Sum_probs=204.3
Q ss_pred eEeceeccCCCeEEEEEEEccCCCEEEEEEeec---chhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 89 ELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKK---SEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 89 ~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~---~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
.....+|.|++|.|+.+......+.++.|.+.. ...........+..|.-+-..+.|||++..+..+.+....+-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 456789999999999988887777777775542 11122222233666777778889999988877777666666669
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
|||++ +|..++...+.+....+..++.|++.||.|||..||.||||||+|+|+..+|.+||+|||.+..+..+...
T Consensus 401 E~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~--- 476 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEK--- 476 (601)
T ss_pred hcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcch---
Confidence 99999 99999988889999999999999999999999999999999999999999999999999998866422110
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCC-ccchhhhhhHH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYG-MECDWWSLGAI 324 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~-~~~DiwSlGvi 324 (452)
.-......+|+..|+|||++.+..|. ..+||||.|++
T Consensus 477 ------------------------------------------~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii 514 (601)
T KOG0590|consen 477 ------------------------------------------NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGII 514 (601)
T ss_pred ------------------------------------------hhhhhcCcccCCcCcCcccccccccCcchhhhhhccce
Confidence 01233467899999999999999995 47899999999
Q ss_pred HHHhhhCCCCCCCCChHHHH---HHHhhccCcc--cCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCC
Q 012988 325 MYEMLVGYPPFYADDPITTC---RKIVHWRNHL--KFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDV 398 (452)
Q Consensus 325 l~elltG~~Pf~~~~~~~~~---~~i~~~~~~~--~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~ 398 (452)
+..|.+|+.||......+.. .....+.... ..+....++...+.+|.+||+ ||.+|. ++++|++.+||+.+
T Consensus 515 ~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~---ti~~i~~d~W~~~i 591 (601)
T KOG0590|consen 515 YICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRI---TIEQILNDEWIRSI 591 (601)
T ss_pred EEEEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhhee---cHHHHhhChHhhhc
Confidence 99999999999765444332 1111111111 111123578999999999999 999999 99999999999977
Q ss_pred C
Q 012988 399 V 399 (452)
Q Consensus 399 ~ 399 (452)
.
T Consensus 592 ~ 592 (601)
T KOG0590|consen 592 E 592 (601)
T ss_pred c
Confidence 5
No 408
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.96 E-value=5.8e-29 Score=221.57 Aligned_cols=161 Identities=21% Similarity=0.227 Sum_probs=128.7
Q ss_pred CChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccccc
Q 012988 171 GDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKT 249 (452)
Q Consensus 171 gsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~ 249 (452)
|+|.+++.. ...+++..++.++.|++.||.|||+.+ ||+|||++.++.+|+ ||+++.....
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~---------- 62 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE---------- 62 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc----------
Confidence 789999976 456999999999999999999999999 999999999999999 9998754210
Q ss_pred cCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhh
Q 012988 250 IDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 329 (452)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ell 329 (452)
...||+.|||||++.+..|+.++|||||||++|||+
T Consensus 63 --------------------------------------------~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ell 98 (176)
T smart00750 63 --------------------------------------------QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEAL 98 (176)
T ss_pred --------------------------------------------cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHH
Confidence 125899999999999999999999999999999999
Q ss_pred hCCCCCCCCChH-HHHHHHhhccCcccC---CCCCCCCh--hHHHHHHHhhc-CccccCCCCCHHHHhcCCCcC
Q 012988 330 VGYPPFYADDPI-TTCRKIVHWRNHLKF---PDDSKLSP--EAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFK 396 (452)
Q Consensus 330 tG~~Pf~~~~~~-~~~~~i~~~~~~~~~---p~~~~~s~--~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~ 396 (452)
+|+.||...... ..+..+......... +....++. ++++||.+||. ||.+|| ++.+++.|+|+.
T Consensus 99 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp---~~~~ll~~~~~~ 169 (176)
T smart00750 99 DYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRRE---AANHYLAHCRAL 169 (176)
T ss_pred hCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhccccccc---CHHHHHHHHHHH
Confidence 999999765432 223333321111100 11112333 69999999999 999999 999999999985
No 409
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.96 E-value=5.1e-27 Score=227.09 Aligned_cols=261 Identities=40% Similarity=0.609 Sum_probs=207.3
Q ss_pred eeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCC-ceeeEEEEEEcCCeEEEEEe
Q 012988 88 FELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASH-CIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 88 y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp-~iv~l~~~~~~~~~~~lV~E 166 (452)
|.+.+.||.|+||.||++.+. ..+++|.+.............+.+|+.++..+.|+ +|+++++.+......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 788999999999999999987 88999999776544333567788999999999988 79999999988888999999
Q ss_pred ecCCCChHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCC-cEEEeeccCCccCCCCcch
Q 012988 167 YLPGGDMMTLLMRED---TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNG-HMKLSDFGLCKPLDCSTLY 242 (452)
Q Consensus 167 ~~~ggsL~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g-~ikl~DFGla~~~~~~~~~ 242 (452)
++.++++.+++.... .+++..+..++.|++.++.|+|+.|++||||||+|||++..+ .++++|||+++.+......
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 999999997776654 799999999999999999999999999999999999999998 7999999998854321100
Q ss_pred hhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC---CCCCccchhh
Q 012988 243 AIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK---KGYGMECDWW 319 (452)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~---~~~~~~~Diw 319 (452)
... .......+||..|+|||.+.+ ..++...|+|
T Consensus 159 ~~~-------------------------------------------~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~ 195 (384)
T COG0515 159 SSI-------------------------------------------PALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIW 195 (384)
T ss_pred ccc-------------------------------------------cccccccccccccCCHHHhcCCCCCCCCchHhHH
Confidence 000 001235689999999999987 5789999999
Q ss_pred hhhHHHHHhhhCCCCCCCCCh----HHHHHHHhhccCc-ccCCCCCCC----ChhHHHHHHHhhc-CccccCCCCCHHHH
Q 012988 320 SLGAIMYEMLVGYPPFYADDP----ITTCRKIVHWRNH-LKFPDDSKL----SPEAKDLICRLLC-DVEHRLGTGGAHQI 389 (452)
Q Consensus 320 SlGvil~elltG~~Pf~~~~~----~~~~~~i~~~~~~-~~~p~~~~~----s~~~~dLi~~mL~-dp~~R~~~~~~~ei 389 (452)
|+|++++++++|..||..... ......+...... ...+..... ...+.+++.+++. +|..|. +..+.
T Consensus 196 s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~---~~~~~ 272 (384)
T COG0515 196 SLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRL---SSSSD 272 (384)
T ss_pred HHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcC---CHHHH
Confidence 999999999999999877663 3444444432222 111111111 2578999999998 999999 77777
Q ss_pred hcCCCcCC
Q 012988 390 KAHPWFKD 397 (452)
Q Consensus 390 l~hp~f~~ 397 (452)
..++|...
T Consensus 273 ~~~~~~~~ 280 (384)
T COG0515 273 LSHDLLAH 280 (384)
T ss_pred hhchHhhC
Confidence 77766654
No 410
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.95 E-value=5.6e-28 Score=236.30 Aligned_cols=146 Identities=17% Similarity=0.174 Sum_probs=117.3
Q ss_pred CCCCCCeeEeceeccCCCeEEEEEEEcc-CCCEEEEEEeecchh--cccchHHHHHHHHHHHHHhCCCceeeEEEEEEcC
Q 012988 82 KICVDDFELLTIIGRGAFGEVRLCREKK-SGNIYAMKKLKKSEM--VKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDT 158 (452)
Q Consensus 82 ~~~~~~y~i~~~LG~G~~g~V~~a~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~ 158 (452)
....++|++.+.||+|+||+||+|.++. ++..||||++..... ........+.+|+.+|+.++|+|++..+..+
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 4456889999999999999999999876 678889998753211 1122345689999999999999988533322
Q ss_pred CeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC-CCCcEEECCCCcEEEeeccCCccCC
Q 012988 159 EYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDI-KPDNLLLDKNGHMKLSDFGLCKPLD 237 (452)
Q Consensus 159 ~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDl-kp~NILl~~~g~ikl~DFGla~~~~ 237 (452)
+..|+||||++|++|.. +.. .. ...++.|++.||.|||+.||+|||| ||+|||++.++.+||+|||+|+.+.
T Consensus 91 ~~~~LVmE~~~G~~L~~-~~~---~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~ 163 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHL-ARP---HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFR 163 (365)
T ss_pred CCcEEEEEccCCCCHHH-hCc---cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecc
Confidence 45799999999999963 211 11 1467899999999999999999999 9999999999999999999999764
No 411
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.95 E-value=1.8e-26 Score=225.57 Aligned_cols=253 Identities=24% Similarity=0.267 Sum_probs=187.1
Q ss_pred CeeEeceeccCCCeEEEEEEEccCC-CEEEEEEeecchhcccchHHHHHHHHHHHHHhCC----CceeeEEEEE-EcCCe
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSG-NIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVAS----HCIVKLYYSF-QDTEY 160 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h----p~iv~l~~~~-~~~~~ 160 (452)
+|.+.++||+|+||.||+|.+..++ ..+|+|+......... ..+..|..++..+.. +++..+++.+ ....+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~---~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP---SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC---ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 8999999999999999999988775 6789998765422211 146778999988873 5899999999 58889
Q ss_pred EEEEEeecCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCC-----CcEEEeeccCC
Q 012988 161 LYLIMEYLPGGDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKN-----GHMKLSDFGLC 233 (452)
Q Consensus 161 ~~lV~E~~~ggsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~-----g~ikl~DFGla 233 (452)
-|+||+.+ |.+|.++.... +.++...+..++.|++.+|.+||+.|++||||||+|+++... ..+.|.|||+|
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99999999 99999988553 589999999999999999999999999999999999999865 35899999999
Q ss_pred ccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCC
Q 012988 234 KPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYG 313 (452)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 313 (452)
+........... . . ..+.......||..|+++.+..+...+
T Consensus 175 r~~~~~~~~~~~-~-----------------~---------------------~~r~~~~~~rGT~ry~S~~~H~~~e~~ 215 (322)
T KOG1164|consen 175 RRFKYVGDSGGN-L-----------------R---------------------PPRPQKGLFRGTLRYASINVHLGIEQG 215 (322)
T ss_pred ccccccCCCCcc-c-----------------c---------------------cCCCCccCCCCccccccHHHhCCCccC
Confidence 843211000000 0 0 000111346799999999999999999
Q ss_pred ccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCC-CCCCCChhHHHHHHHhhc-CccccCC
Q 012988 314 MECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFP-DDSKLSPEAKDLICRLLC-DVEHRLG 382 (452)
Q Consensus 314 ~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p-~~~~~s~~~~dLi~~mL~-dp~~R~~ 382 (452)
.+.|+||++.++.+|+.|..||.+.........+.......... .....+.++.++...+-. +...+|.
T Consensus 216 r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pd 286 (322)
T KOG1164|consen 216 RRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPD 286 (322)
T ss_pred CchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCC
Confidence 99999999999999999999997765433333332222222222 111233555555554444 7777773
No 412
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=1.8e-26 Score=203.89 Aligned_cols=245 Identities=22% Similarity=0.239 Sum_probs=189.2
Q ss_pred CCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCC-CceeeEEEEEEcCCe
Q 012988 82 KICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVAS-HCIVKLYYSFQDTEY 160 (452)
Q Consensus 82 ~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h-p~iv~l~~~~~~~~~ 160 (452)
.+..+.|.++++||.|+||.+|+|....+|..||||+=.... ....+.-|..+-+.+++ ..|..+..++.+..+
T Consensus 11 ~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-----~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~y 85 (341)
T KOG1163|consen 11 LIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-----KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDY 85 (341)
T ss_pred heeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-----CCcchhHHHHHHHHhccCCCCchhhhhcccccc
Confidence 345688999999999999999999999999999999754321 12346678899999975 678888888889999
Q ss_pred EEEEEeecCCCChHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCC---cEEEeeccCCccC
Q 012988 161 LYLIMEYLPGGDMMTLLM-REDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNG---HMKLSDFGLCKPL 236 (452)
Q Consensus 161 ~~lV~E~~~ggsL~~~l~-~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g---~ikl~DFGla~~~ 236 (452)
-.+||+++ |.+|.+++. ....|+...+..++-|++.-++|+|.+++|||||||+|+|+.-+- .+.|+|||+|+.+
T Consensus 86 nvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky 164 (341)
T KOG1163|consen 86 NVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY 164 (341)
T ss_pred ceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhh
Confidence 99999999 899999884 467899999999999999999999999999999999999997554 5899999999976
Q ss_pred CCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccc
Q 012988 237 DCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMEC 316 (452)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~ 316 (452)
-.......-+ -.......||..|.+--...+...+..-
T Consensus 165 ~d~~t~~HIp------------------------------------------yre~r~ltGTaRYASinAh~g~eqSRRD 202 (341)
T KOG1163|consen 165 RDIRTRQHIP------------------------------------------YREDRNLTGTARYASINAHLGIEQSRRD 202 (341)
T ss_pred ccccccccCc------------------------------------------cccCCccceeeeehhhhhhhhhhhhhhh
Confidence 4322111000 0011246799999999888888889999
Q ss_pred hhhhhhHHHHHhhhCCCCCCCCCh---HHHHHHHhhccCcccCC-CCCCCChhHHHHHHHhh
Q 012988 317 DWWSLGAIMYEMLVGYPPFYADDP---ITTCRKIVHWRNHLKFP-DDSKLSPEAKDLICRLL 374 (452)
Q Consensus 317 DiwSlGvil~elltG~~Pf~~~~~---~~~~~~i~~~~~~~~~p-~~~~~s~~~~dLi~~mL 374 (452)
|+=|+|.+|..+..|..||.+... .+-+.+|...+...... -+..++.++.-.+.-|-
T Consensus 203 DmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R 264 (341)
T KOG1163|consen 203 DMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCR 264 (341)
T ss_pred hhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHh
Confidence 999999999999999999987543 33455555433222211 12356667666665443
No 413
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.94 E-value=8.8e-28 Score=249.69 Aligned_cols=329 Identities=32% Similarity=0.506 Sum_probs=263.5
Q ss_pred CCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeE
Q 012988 82 KICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYL 161 (452)
Q Consensus 82 ~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~ 161 (452)
....+++.+++-+-+|++|.++.+.-..+|...++|+..+.........+.+..+..++-...+|.++..+..|......
T Consensus 800 rsS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~ 879 (1205)
T KOG0606|consen 800 RSSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPL 879 (1205)
T ss_pred cCCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCc
Confidence 45778999999999999999999998888988999988777666666666677777777777889999888888888899
Q ss_pred EEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcc
Q 012988 162 YLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTL 241 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~ 241 (452)
++|++|+.|++|...|+.-++.+++.++.++..+..+++|||...+.|||++|.|+|+..+|+.+++|||.......-..
T Consensus 880 ~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p 959 (1205)
T KOG0606|consen 880 PLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPP 959 (1205)
T ss_pred chhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccC
Confidence 99999999999999999888999999999999999999999999999999999999999999999999996554321110
Q ss_pred hhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhh
Q 012988 242 YAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSL 321 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSl 321 (452)
.. +..|+.-.. ..-.......................||+.|.|||.+.+......+|||++
T Consensus 960 ~~----------------~~sg~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~ 1021 (1205)
T KOG0606|consen 960 TT----------------DLSGPSSSG--TPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSS 1021 (1205)
T ss_pred cC----------------CcccccccC--ccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhh
Confidence 00 000000000 000000000001111111122346789999999999999999999999999
Q ss_pred hHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCC-CCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCCC
Q 012988 322 GAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDD-SKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDVV 399 (452)
Q Consensus 322 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~-~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~~ 399 (452)
|++++|.++|.+||....+...+.+|.. .....|.. ...+.++++++.++|. +|.+|.+...+.++..||||++++
T Consensus 1022 g~~l~e~l~g~pp~na~tpq~~f~ni~~--~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~ 1099 (1205)
T KOG0606|consen 1022 GVCLFEVLTGIPPFNAETPQQIFENILN--RDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVD 1099 (1205)
T ss_pred hhhhhhhhcCCCCCCCcchhhhhhcccc--CCCCCCCCccccChhhhhhhhhhhccCchhccCcccccccccCCccCCCC
Confidence 9999999999999999999999999886 44455543 2568999999999998 999999887888999999999999
Q ss_pred ccccccCCCCccccCCCCccCCCCCCCCCCC
Q 012988 400 WDKLYEMEAAFKPEINGELDTQNFMKFDELD 430 (452)
Q Consensus 400 ~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~ 430 (452)
|+.|......|+|.+.+..|+++|.+-...+
T Consensus 1100 ~~~l~~q~~~~~p~~~s~~dtS~~~~r~~~~ 1130 (1205)
T KOG0606|consen 1100 WENLALQKAEFVPQPESTQDTSYFESRFSEE 1130 (1205)
T ss_pred ccccccccCccCCCCCCCCccchhhcccccc
Confidence 9999998999999999999999998755544
No 414
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.93 E-value=2.1e-25 Score=205.64 Aligned_cols=218 Identities=23% Similarity=0.340 Sum_probs=178.0
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhC-CCceeeEEEEEEcCCeE
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVA-SHCIVKLYYSFQDTEYL 161 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~~~~~~ 161 (452)
+.--+|.+.++||.|+||..+++.+..++++||||.=... ...-.+..|-...+.|. .++|...|++.+.+-+-
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-----S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~N 99 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-----SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYN 99 (449)
T ss_pred EecccceeccccccCcceeeecccccccCceEEEEecccc-----CCcchHHHHHHHHHHHcCCCCCCceeeeccccchh
Confidence 4455799999999999999999999999999999964322 22345667888888875 68999999998988888
Q ss_pred EEEEeecCCCChHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCC-----cEEEeeccCCcc
Q 012988 162 YLIMEYLPGGDMMTLLM-REDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNG-----HMKLSDFGLCKP 235 (452)
Q Consensus 162 ~lV~E~~~ggsL~~~l~-~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g-----~ikl~DFGla~~ 235 (452)
.||||++ |.||.+++. ..+.|+...+..++.|++.-++|+|++.+|+|||||+|+||..-| .|.|+|||+|+.
T Consensus 100 iLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~ 178 (449)
T KOG1165|consen 100 ILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE 178 (449)
T ss_pred hhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence 9999999 889999884 467899999999999999999999999999999999999997644 489999999998
Q ss_pred CCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCcc
Q 012988 236 LDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGME 315 (452)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~ 315 (452)
...+.... |..+ ....+..||..||+--...+...+.+
T Consensus 179 YrDp~Tkq---HIPY---------------------------------------rE~KSLsGTARYMSINTHlGrEQSRR 216 (449)
T KOG1165|consen 179 YRDPKTKQ---HIPY---------------------------------------REHKSLSGTARYMSINTHLGREQSRR 216 (449)
T ss_pred hcCccccc---cCcc---------------------------------------ccccccccceeeeEeeccccchhhhh
Confidence 75432211 1000 01125679999999999999999999
Q ss_pred chhhhhhHHHHHhhhCCCCCCCC---ChHHHHHHHh
Q 012988 316 CDWWSLGAIMYEMLVGYPPFYAD---DPITTCRKIV 348 (452)
Q Consensus 316 ~DiwSlGvil~elltG~~Pf~~~---~~~~~~~~i~ 348 (452)
-|+=|||-++.+.|.|.+||.+. +..+-+.+|-
T Consensus 217 DDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIG 252 (449)
T KOG1165|consen 217 DDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIG 252 (449)
T ss_pred hhHHHhhhhhhhhccCCCccccccCcchHHHHHHhc
Confidence 99999999999999999999763 4444455553
No 415
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.93 E-value=1.6e-25 Score=201.60 Aligned_cols=143 Identities=20% Similarity=0.219 Sum_probs=113.3
Q ss_pred eceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccch-----------------------HHHHHHHHHHHHHhCCCc
Q 012988 91 LTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQ-----------------------VEHVRAERNLLAEVASHC 147 (452)
Q Consensus 91 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~-----------------------~~~~~~E~~il~~l~hp~ 147 (452)
...||+|+||.||+|.+. +|+.||||+++......... ......|..++..+.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 468999999999999986 89999999997653211110 123345999999998877
Q ss_pred eeeEEEEEEcCCeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HHCCeeecCCCCCcEEECCCCcEE
Q 012988 148 IVKLYYSFQDTEYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESI-HKHNYIHRDIKPDNLLLDKNGHMK 226 (452)
Q Consensus 148 iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~L-H~~givHrDlkp~NILl~~~g~ik 226 (452)
+.....+.... .+|||||++|+++...+.....+++..+..++.|++.+|.+| |+.||+||||||+|||++ ++.++
T Consensus 81 v~~p~~~~~~~--~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~ 157 (190)
T cd05147 81 IPCPEPILLKS--HVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLY 157 (190)
T ss_pred CCCCcEEEecC--CEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEE
Confidence 64433322222 389999999888776655567899999999999999999999 799999999999999998 57899
Q ss_pred EeeccCCccCC
Q 012988 227 LSDFGLCKPLD 237 (452)
Q Consensus 227 l~DFGla~~~~ 237 (452)
|+|||+|....
T Consensus 158 LiDFG~a~~~~ 168 (190)
T cd05147 158 IIDVSQSVEHD 168 (190)
T ss_pred EEEccccccCC
Confidence 99999998543
No 416
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.92 E-value=4e-25 Score=201.61 Aligned_cols=142 Identities=16% Similarity=0.208 Sum_probs=116.1
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHH------HHHHHHHHHHhCCCceeeEEEEEEc
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEH------VRAERNLLAEVASHCIVKLYYSFQD 157 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~------~~~E~~il~~l~hp~iv~l~~~~~~ 157 (452)
..++|++++.||.|+||.||++.. ++..+|+|++............. +.+|+..+.++.|++|..+.+++..
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 357899999999999999999755 47789999997554333333333 5789999999999999999888764
Q ss_pred C--------CeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEee
Q 012988 158 T--------EYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSD 229 (452)
Q Consensus 158 ~--------~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~D 229 (452)
. +..++||||++|.+|.++. .+++. ...+++.+|..+|..||+|||+||+||+++.+| ++|+|
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~----~~~~~----~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liD 177 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMP----EISED----VKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIID 177 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhh----hccHH----HHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEE
Confidence 3 3588999999999998773 23332 456999999999999999999999999999999 99999
Q ss_pred ccCCccC
Q 012988 230 FGLCKPL 236 (452)
Q Consensus 230 FGla~~~ 236 (452)
||.....
T Consensus 178 fg~~~~~ 184 (232)
T PRK10359 178 LSGKRCT 184 (232)
T ss_pred CCCcccc
Confidence 9987644
No 417
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.92 E-value=3.4e-24 Score=193.42 Aligned_cols=145 Identities=19% Similarity=0.183 Sum_probs=115.5
Q ss_pred EeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccc-----------------------hHHHHHHHHHHHHHhCCC
Q 012988 90 LLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRG-----------------------QVEHVRAERNLLAEVASH 146 (452)
Q Consensus 90 i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~-----------------------~~~~~~~E~~il~~l~hp 146 (452)
+.+.||+|+||+||+|.+. +|+.||||++......... .......|...+..+.|+
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05145 1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA 79 (190)
T ss_pred CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 3578999999999999987 8999999999865321100 012346789999999999
Q ss_pred ceeeEEEEEEcCCeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCCCcEEECCCCcE
Q 012988 147 CIVKLYYSFQDTEYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHK-HNYIHRDIKPDNLLLDKNGHM 225 (452)
Q Consensus 147 ~iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~-~givHrDlkp~NILl~~~g~i 225 (452)
++.....+.... .||||||++|+++.........+++..+..++.|++.+|.+||. .||+||||||+|||++ ++.+
T Consensus 80 ~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~ 156 (190)
T cd05145 80 GVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKP 156 (190)
T ss_pred CCCCceEEEecC--CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCE
Confidence 875444433332 48999999888665443345678888999999999999999999 9999999999999999 8999
Q ss_pred EEeeccCCccCCC
Q 012988 226 KLSDFGLCKPLDC 238 (452)
Q Consensus 226 kl~DFGla~~~~~ 238 (452)
+|+|||+|..+..
T Consensus 157 ~liDFG~a~~~~~ 169 (190)
T cd05145 157 YIIDVSQAVELDH 169 (190)
T ss_pred EEEEcccceecCC
Confidence 9999999987653
No 418
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.92 E-value=1.8e-24 Score=203.17 Aligned_cols=232 Identities=22% Similarity=0.324 Sum_probs=151.9
Q ss_pred eeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCC----------CceeeEEEEEE-
Q 012988 88 FELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVAS----------HCIVKLYYSFQ- 156 (452)
Q Consensus 88 y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h----------p~iv~l~~~~~- 156 (452)
+.....||.|++|.||.+.+..||+.+|+|++...........+.+++|.-....+.+ -.++..++...
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 5667899999999999999999999999999876554455556666666544333221 11222222221
Q ss_pred --------cC---C-----eEEEEEeecCCCChHHHHH---hcCCC---CHHHHHH-HHHHHHHHHHHHHHCCeeecCCC
Q 012988 157 --------DT---E-----YLYLIMEYLPGGDMMTLLM---REDTL---TENVARF-YIAQSVLAIESIHKHNYIHRDIK 213 (452)
Q Consensus 157 --------~~---~-----~~~lV~E~~~ggsL~~~l~---~~~~~---~~~~~~~-~~~ql~~aL~~LH~~givHrDlk 213 (452)
.. . +.+++|+-+ .+||..++. ..... ....++. +..|++..+++||..||+|+||+
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~ 172 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK 172 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence 11 1 347788888 678887753 22222 1233433 44899999999999999999999
Q ss_pred CCcEEECCCCcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhcccccc
Q 012988 214 PDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAF 293 (452)
Q Consensus 214 p~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (452)
|+|+|++.+|.++|+||+.....+... .
T Consensus 173 ~~nfll~~~G~v~Lg~F~~~~r~g~~~----------------------------------------------------~ 200 (288)
T PF14531_consen 173 PENFLLDQDGGVFLGDFSSLVRAGTRY----------------------------------------------------R 200 (288)
T ss_dssp GGGEEE-TTS-EEE--GGGEEETTEEE----------------------------------------------------E
T ss_pred eeeEEEcCCCCEEEcChHHHeecCcee----------------------------------------------------e
Confidence 999999999999999999876543110 0
Q ss_pred ccccCCccccchhccC--------CCCCccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChh
Q 012988 294 STVGTPDYIAPEVLLK--------KGYGMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPE 365 (452)
Q Consensus 294 ~~~Gt~~y~APE~~~~--------~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~ 365 (452)
....+..|.+||.... ..++.+.|.|+||+++|.|++|..||........ ....|..+..++..
T Consensus 201 ~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~--------~~~~f~~C~~~Pe~ 272 (288)
T PF14531_consen 201 CSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEAD--------PEWDFSRCRDMPEP 272 (288)
T ss_dssp GGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGST--------SGGGGTTSS---HH
T ss_pred ccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCcccc--------ccccchhcCCcCHH
Confidence 1234577999998743 2478899999999999999999999986644221 11144455578899
Q ss_pred HHHHHHHhhc-Ccccc
Q 012988 366 AKDLICRLLC-DVEHR 380 (452)
Q Consensus 366 ~~dLi~~mL~-dp~~R 380 (452)
.++||.+||. ||.+|
T Consensus 273 v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 273 VQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHHHHT-SSGGGS
T ss_pred HHHHHHHHccCCcccC
Confidence 9999999999 99887
No 419
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.91 E-value=1.1e-23 Score=188.25 Aligned_cols=202 Identities=19% Similarity=0.242 Sum_probs=143.9
Q ss_pred eEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccc-hHHHHHHHHHHHHHhC-CCceeeEEEEEEcCCeEEEEEe
Q 012988 89 ELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRG-QVEHVRAERNLLAEVA-SHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 89 ~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~-~~~~~~~E~~il~~l~-hp~iv~l~~~~~~~~~~~lV~E 166 (452)
.+...|++|+||+|+++.. .+..++.+.+......... ....+.+|+++|+.+. |++|++++++ +..|++||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme 78 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS 78 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence 4567899999999997754 6788887777554332221 1224789999999995 4789999886 34699999
Q ss_pred ecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC-CCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 167 YLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDI-KPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 167 ~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDl-kp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
|+.|.+|...+.. . ...++.|++.+|.++|++||+|||| ||+|||++.+|.++|+|||+|........
T Consensus 79 yI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~---- 147 (218)
T PRK12274 79 YLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR---- 147 (218)
T ss_pred eecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcch----
Confidence 9999998754321 1 1347889999999999999999999 79999999999999999999985432110
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC-CCC-ccchhhhhhH
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK-GYG-MECDWWSLGA 323 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~-~~~-~~~DiwSlGv 323 (452)
| ...+.. ..-+.-...-...++.|++|+--.-. ..+ ...+|++.|.
T Consensus 148 ----------------------------~---~r~L~~-rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~ 195 (218)
T PRK12274 148 ----------------------------W---MRLLAR-EDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGK 195 (218)
T ss_pred ----------------------------H---HHHHHH-HHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcc
Confidence 0 000000 00000111123378899999864422 223 6789999999
Q ss_pred HHHHhhhCCCCCCCCC
Q 012988 324 IMYEMLVGYPPFYADD 339 (452)
Q Consensus 324 il~elltG~~Pf~~~~ 339 (452)
.+|.++||..|+.+++
T Consensus 196 ~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 196 PVYRFVTRRVLHWEDN 211 (218)
T ss_pred hHHHHHhccCCccccC
Confidence 9999999999987654
No 420
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=2.8e-24 Score=202.41 Aligned_cols=274 Identities=26% Similarity=0.368 Sum_probs=183.5
Q ss_pred cCCCCCCCeeEeceeccCCCeEEEEEEEccCCC-----------------------------------EEEEEEeecchh
Q 012988 80 RHKICVDDFELLTIIGRGAFGEVRLCREKKSGN-----------------------------------IYAMKKLKKSEM 124 (452)
Q Consensus 80 ~~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~-----------------------------------~vavK~~~~~~~ 124 (452)
..++.+++|+|...||+|....||.|....+|. +.|||.+-.-+.
T Consensus 151 dskFtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~ 230 (598)
T KOG4158|consen 151 DSKFTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEH 230 (598)
T ss_pred hcccchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhccccc
Confidence 457788999999999999999999886543211 245555432211
Q ss_pred cccc--hHHHHHHHH------HH-----------HH----H-hCCCceeeEEEEEEc-----------------------
Q 012988 125 VKRG--QVEHVRAER------NL-----------LA----E-VASHCIVKLYYSFQD----------------------- 157 (452)
Q Consensus 125 ~~~~--~~~~~~~E~------~i-----------l~----~-l~hp~iv~l~~~~~~----------------------- 157 (452)
.... ......+|. .. +. + -.|||||+++..|.+
T Consensus 231 ~s~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~ 310 (598)
T KOG4158|consen 231 DSGDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPS 310 (598)
T ss_pred CCchHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceeccc
Confidence 1100 011111221 00 00 1 259999999988853
Q ss_pred ----CCeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEE--CCCC--cEEEee
Q 012988 158 ----TEYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLL--DKNG--HMKLSD 229 (452)
Q Consensus 158 ----~~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl--~~~g--~ikl~D 229 (452)
...+|+||.-. ..+|+.++-. ...+....+.++.|+++|+.|||.+||.|||+|.+|||+ |+|+ .+.|+|
T Consensus 311 g~g~~~tlylvMkrY-~~tLr~yl~~-~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaD 388 (598)
T KOG4158|consen 311 GAGEPKTLYLVMKRY-RQTLREYLWT-RHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVAD 388 (598)
T ss_pred ccCCCceEEEehhcc-hhhHHHHHhc-CCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcc
Confidence 34589999888 4589998854 456777888999999999999999999999999999997 4555 478999
Q ss_pred ccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccC
Q 012988 230 FGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLK 309 (452)
Q Consensus 230 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~ 309 (452)
||++-.-.........+ +| ....-|.-.-||||+...
T Consensus 389 FGCcLAd~~hGlqlpy~--------------------------S~-----------------~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 389 FGCCLADDNHGLQLPYE--------------------------SD-----------------EVDLGGNAKLMAPEIATA 425 (598)
T ss_pred cceeeeccccccccccc--------------------------cc-----------------cccCCCcceecchhhhhc
Confidence 99875422111000000 00 012336677899999864
Q ss_pred CC-----CC-ccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCC
Q 012988 310 KG-----YG-MECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLG 382 (452)
Q Consensus 310 ~~-----~~-~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~ 382 (452)
.+ .+ .++|.|+.|.+.||+++...||++......-..-....+-..+| +.+++.+++|+..+|+ ||.+|++
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp--~~vpp~~rqlV~~lL~r~pskRvs 503 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALP--SRVPPVARQLVFDLLKRDPSKRVS 503 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCc--ccCChHHHHHHHHHhcCCccccCC
Confidence 22 12 37999999999999999999998844332222222212223344 3789999999999999 9999997
Q ss_pred CCCHHHHhcCCCcCCCCc
Q 012988 383 TGGAHQIKAHPWFKDVVW 400 (452)
Q Consensus 383 ~~~~~eil~hp~f~~~~~ 400 (452)
..-+..+++-..+..-+|
T Consensus 504 p~iAANvl~LsLw~~~~~ 521 (598)
T KOG4158|consen 504 PNIAANVLNLSLWRMGED 521 (598)
T ss_pred ccHHHhHHHHHHhcCchH
Confidence 655666776555554444
No 421
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.90 E-value=2e-24 Score=225.05 Aligned_cols=243 Identities=21% Similarity=0.320 Sum_probs=181.0
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecch-hcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSE-MVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
+|...+.||.+-|=+|.+|++. ...|+||++-+.. ...-....+...|+. ...+++||.+.+.-+...+...|||-
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~--eG~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvR 100 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR--EGLVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVR 100 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC--CceEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHH
Confidence 6888999999999999988764 4459999987654 222222333333444 66679999999888878888899999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhc
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIH 245 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~ 245 (452)
+|+ .-+|++.+..+..+..-+.++|+.|++.||.-+|..||+|+|||.|||||++-..+.|+||...+..--+.
T Consensus 101 qyv-khnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe----- 174 (1431)
T KOG1240|consen 101 QYV-KHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPE----- 174 (1431)
T ss_pred HHH-hhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCC-----
Confidence 999 56999999888888999999999999999999999999999999999999999999999999776432110
Q ss_pred cccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC----------C-CCc
Q 012988 246 EHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK----------G-YGM 314 (452)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~----------~-~~~ 314 (452)
|+-..+.. .++ +...-..|.|||.+... + .++
T Consensus 175 -----------------------DNPadf~f------FFD--------TSrRRtCYiAPERFv~~~~~~~~~q~~~~L~p 217 (1431)
T KOG1240|consen 175 -----------------------DNPADFTF------FFD--------TSRRRTCYIAPERFVSALGKTSVGQDAPLLTP 217 (1431)
T ss_pred -----------------------CCcccceE------EEe--------cCCceeeecChHhhhccccccccCCcccccCh
Confidence 10000000 000 00112369999987541 2 577
Q ss_pred cchhhhhhHHHHHhhh-CCCCCCC-----------CChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccC
Q 012988 315 ECDWWSLGAIMYEMLV-GYPPFYA-----------DDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRL 381 (452)
Q Consensus 315 ~~DiwSlGvil~ellt-G~~Pf~~-----------~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~ 381 (452)
+-||||+||+++||++ |++||.- .+.+..+.+| + +..++.||..|++ ||.+|+
T Consensus 218 aMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~~e~~Le~I---------e-----d~~~Rnlil~Mi~rdPs~Rl 283 (1431)
T KOG1240|consen 218 AMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADDPEQLLEKI---------E-----DVSLRNLILSMIQRDPSKRL 283 (1431)
T ss_pred hhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccCHHHHHHhC---------c-----CccHHHHHHHHHccCchhcc
Confidence 8999999999999987 7888842 1112222211 1 2578999999999 999999
Q ss_pred CCCCHHHHhcC
Q 012988 382 GTGGAHQIKAH 392 (452)
Q Consensus 382 ~~~~~~eil~h 392 (452)
+|++.|+-
T Consensus 284 ---SAedyL~~ 291 (1431)
T KOG1240|consen 284 ---SAEDYLQK 291 (1431)
T ss_pred ---CHHHHHHh
Confidence 99999875
No 422
>PRK10345 hypothetical protein; Provisional
Probab=99.89 E-value=2.9e-22 Score=182.20 Aligned_cols=136 Identities=15% Similarity=0.200 Sum_probs=108.1
Q ss_pred eceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-----CCCceeeEEEEEEcCC---eEE
Q 012988 91 LTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-----ASHCIVKLYYSFQDTE---YLY 162 (452)
Q Consensus 91 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-----~hp~iv~l~~~~~~~~---~~~ 162 (452)
...||+|+||.||. +..++.. +||++.... ....+.+.+|+.+++.+ +||||++++++++++. .++
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~---~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRG---DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccc---cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 46899999999995 6666665 699886542 22346689999999999 5799999999999874 444
Q ss_pred -EEEee--cCCCChHHHHHhcCCCCHHHHHHHHHHHHHHH-HHHHHCCeeecCCCCCcEEECCC----CcEEEeeccCCc
Q 012988 163 -LIMEY--LPGGDMMTLLMREDTLTENVARFYIAQSVLAI-ESIHKHNYIHRDIKPDNLLLDKN----GHMKLSDFGLCK 234 (452)
Q Consensus 163 -lV~E~--~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL-~~LH~~givHrDlkp~NILl~~~----g~ikl~DFGla~ 234 (452)
+|||| +.+|+|.+++.+ ..+++. ..++.|++.++ +|||+++|+||||||+|||++.. +.++|+||+-+.
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~-~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~ 157 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQ-CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGES 157 (210)
T ss_pred EEEecCCCCcchhHHHHHHc-ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCc
Confidence 78999 557999999965 456666 35688888887 99999999999999999999743 379999955444
Q ss_pred c
Q 012988 235 P 235 (452)
Q Consensus 235 ~ 235 (452)
.
T Consensus 158 ~ 158 (210)
T PRK10345 158 T 158 (210)
T ss_pred c
Confidence 3
No 423
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.88 E-value=3.2e-23 Score=186.39 Aligned_cols=238 Identities=19% Similarity=0.253 Sum_probs=193.5
Q ss_pred CCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEE
Q 012988 83 ICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLY 162 (452)
Q Consensus 83 ~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~ 162 (452)
+...+..++.+|.+.-.|..|+++++ |..+++|++.-..... .....+..|.-.|+...||||+.+++.+....++.
T Consensus 187 id~~~lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~-risrdfneefp~lrifshpnilpvlgacnsppnlv 263 (448)
T KOG0195|consen 187 IDVSSLNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTA-RISRDFNEEFPALRIFSHPNILPVLGACNSPPNLV 263 (448)
T ss_pred cchhhhhhhhhhccCCCccccccccc--Ccchhhhhhhhhhcch-hhcchhhhhCcceeeecCCchhhhhhhccCCCCce
Confidence 44456677889999999999999876 6677888876554332 23456888999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCCCcEEECCCCcEEEe--eccCCccC
Q 012988 163 LIMEYLPGGDMMTLLMRED--TLTENVARFYIAQSVLAIESIHKHN--YIHRDIKPDNLLLDKNGHMKLS--DFGLCKPL 236 (452)
Q Consensus 163 lV~E~~~ggsL~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~g--ivHrDlkp~NILl~~~g~ikl~--DFGla~~~ 236 (452)
++..||+.|+|+.+|.... ..+..++..++..++.|+.|||+.. |.---|....|+||++-+.+|+ |--++...
T Consensus 264 ~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe 343 (448)
T KOG0195|consen 264 IISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQE 343 (448)
T ss_pred EeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeec
Confidence 9999999999999997754 4677889999999999999999973 4455688999999999887764 22221110
Q ss_pred CCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCC---C
Q 012988 237 DCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGY---G 313 (452)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~---~ 313 (452)
....-.|.||+||.+...+- -
T Consensus 344 --------------------------------------------------------~gr~y~pawmspealqrkped~n~ 367 (448)
T KOG0195|consen 344 --------------------------------------------------------VGRAYSPAWMSPEALQRKPEDLNI 367 (448)
T ss_pred --------------------------------------------------------cccccCcccCCHHHHhcCchhcch
Confidence 12234688999999987654 3
Q ss_pred ccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccC
Q 012988 314 MECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRL 381 (452)
Q Consensus 314 ~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~ 381 (452)
.++|+|||++++|||.|...||....+.+.-.+|....-...+|. .++.....|+.-|+. ||.+||
T Consensus 368 raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ipp--gis~hm~klm~icmnedpgkrp 434 (448)
T KOG0195|consen 368 RAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPP--GISRHMNKLMNICMNEDPGKRP 434 (448)
T ss_pred hhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCC--CccHHHHHHHHHHhcCCCCcCC
Confidence 589999999999999999999999999988888876555666665 799999999999999 999999
No 424
>smart00090 RIO RIO-like kinase.
Probab=99.87 E-value=7.5e-22 Score=183.68 Aligned_cols=146 Identities=16% Similarity=0.136 Sum_probs=116.9
Q ss_pred CeeEeceeccCCCeEEEEEE-EccCCCEEEEEEeecchhccc-----------------c----hHHHHHHHHHHHHHhC
Q 012988 87 DFELLTIIGRGAFGEVRLCR-EKKSGNIYAMKKLKKSEMVKR-----------------G----QVEHVRAERNLLAEVA 144 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~-~~~~~~~vavK~~~~~~~~~~-----------------~----~~~~~~~E~~il~~l~ 144 (452)
.|.+.+.||+|+||.||+|. +..+|+.||+|++........ . ....+..|..++..+.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47889999999999999998 677899999999875432100 0 1123578999999997
Q ss_pred CC--ceeeEEEEEEcCCeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCCCcEEECC
Q 012988 145 SH--CIVKLYYSFQDTEYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHN-YIHRDIKPDNLLLDK 221 (452)
Q Consensus 145 hp--~iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~g-ivHrDlkp~NILl~~ 221 (452)
+. .++++++. . ..++||||++|++|.........+....+..++.|++.+|.+||..| |+||||||+|||++
T Consensus 109 ~~~i~~p~~~~~---~-~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~- 183 (237)
T smart00090 109 EAGVPVPKPIAW---R-RNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH- 183 (237)
T ss_pred hcCCCCCeeeEe---c-CceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-
Confidence 63 34455443 2 34899999999888776545556777778899999999999999999 99999999999999
Q ss_pred CCcEEEeeccCCccCC
Q 012988 222 NGHMKLSDFGLCKPLD 237 (452)
Q Consensus 222 ~g~ikl~DFGla~~~~ 237 (452)
++.++|+|||.|....
T Consensus 184 ~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 184 DGKVVIIDVSQSVELD 199 (237)
T ss_pred CCCEEEEEChhhhccC
Confidence 8899999999988654
No 425
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.86 E-value=2.3e-23 Score=216.70 Aligned_cols=263 Identities=24% Similarity=0.416 Sum_probs=211.4
Q ss_pred CCCeeEeceeccCCCeEEEEEEEcc-CCCEEEEEEeecchhcccchHHHHHHHHHHHHHhC-CCceeeEEEEEEcCCeEE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKK-SGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVA-SHCIVKLYYSFQDTEYLY 162 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~~~~~~~ 162 (452)
...|.+.+.||+|+|+.|-++.... +...+|+|.+.... .......++..|..+-+.+. |+|++++++...+.+..+
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~ 97 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYL 97 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCcccc
Confidence 4679999999999999999887744 34567777665443 23444566777888888887 999999999999999999
Q ss_pred EEEeecCCCChHHHH-HhcC-CCCHHHHHHHHHHHHHHHHHHH-HCCeeecCCCCCcEEECCCC-cEEEeeccCCccCCC
Q 012988 163 LIMEYLPGGDMMTLL-MRED-TLTENVARFYIAQSVLAIESIH-KHNYIHRDIKPDNLLLDKNG-HMKLSDFGLCKPLDC 238 (452)
Q Consensus 163 lV~E~~~ggsL~~~l-~~~~-~~~~~~~~~~~~ql~~aL~~LH-~~givHrDlkp~NILl~~~g-~ikl~DFGla~~~~~ 238 (452)
++++|..||++...+ .... ..+...+..++.|+..+|.|+| ..++.||||||+|.+++..+ .+++.|||+|..+..
T Consensus 98 ~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 98 LSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred cccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 999999999999988 5554 6788889999999999999999 99999999999999999999 999999999987642
Q ss_pred CcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhcccccccccc-CCccccchhccCCCC-Cccc
Q 012988 239 STLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVG-TPDYIAPEVLLKKGY-GMEC 316 (452)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-t~~y~APE~~~~~~~-~~~~ 316 (452)
.. +........+| ++.|+|||...+..| ....
T Consensus 178 ~~----------------------------------------------g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~ 211 (601)
T KOG0590|consen 178 KN----------------------------------------------GAERSLKDRCGSSPPYGAPEHLSGKAYRGPSV 211 (601)
T ss_pred cC----------------------------------------------CcceeeecccCCCCCCCCcccccchhhcCCCc
Confidence 00 01112234578 999999999988555 7899
Q ss_pred hhhhhhHHHHHhhhCCCCCCCCChHHHH-HHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCC
Q 012988 317 DWWSLGAIMYEMLVGYPPFYADDPITTC-RKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPW 394 (452)
Q Consensus 317 DiwSlGvil~elltG~~Pf~~~~~~~~~-~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~ 394 (452)
|+||.|+++.-+++|..|+......... .........+....+..++..+.+++.++|. +|..|. +..++..+||
T Consensus 212 d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~---s~~~~~~d~~ 288 (601)
T KOG0590|consen 212 DVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRL---SIEELKLDNW 288 (601)
T ss_pred ccccccccccccccCCCCccccccccccceeecccccccccCccccCChhhhhcccccccCCchhcc---cccccccccc
Confidence 9999999999999999999765543321 1111112233344456789999999999998 999999 8999999999
Q ss_pred cCC
Q 012988 395 FKD 397 (452)
Q Consensus 395 f~~ 397 (452)
+..
T Consensus 289 ~~~ 291 (601)
T KOG0590|consen 289 LSS 291 (601)
T ss_pred ccc
Confidence 987
No 426
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=2e-21 Score=206.33 Aligned_cols=199 Identities=23% Similarity=0.339 Sum_probs=156.9
Q ss_pred CCCCCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhC---CCceeeEEEEEEc
Q 012988 81 HKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVA---SHCIVKLYYSFQD 157 (452)
Q Consensus 81 ~~~~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~---hp~iv~l~~~~~~ 157 (452)
.++....|.|-+.||+|+||+||+|.... |+.||+|+=+...... +.--..++.+|+ -+.|..+...+.-
T Consensus 693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE------fYI~~q~~~RLk~~~~~~~~~~~~a~~~ 765 (974)
T KOG1166|consen 693 FEVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE------FYICLQVMERLKPQMLPSIMHISSAHVF 765 (974)
T ss_pred eeecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCcee------eeehHHHHHhhchhhhcchHHHHHHHcc
Confidence 34556789999999999999999999877 9999999865543221 111223344444 2345555544455
Q ss_pred CCeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECC-------CCcEEEeec
Q 012988 158 TEYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDK-------NGHMKLSDF 230 (452)
Q Consensus 158 ~~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~-------~g~ikl~DF 230 (452)
.+..++|+||.+.|+|.+++...+.+++..+.+++.|++..|+.||..||||+||||+|+||.. +--++|+||
T Consensus 766 ~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDf 845 (974)
T KOG1166|consen 766 QNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDF 845 (974)
T ss_pred CCcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEec
Confidence 5667899999999999999998899999999999999999999999999999999999999953 225899999
Q ss_pred cCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC
Q 012988 231 GLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK 310 (452)
Q Consensus 231 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~ 310 (452)
|.+-.+..- |+ .......++|-.+-.+|+..|.
T Consensus 846 G~siDm~lf--------------------------p~---------------------~~~F~~~~~td~f~C~EM~~gr 878 (974)
T KOG1166|consen 846 GRSIDMKLF--------------------------PD---------------------GTKFKAVWHTDLFDCIEMREGR 878 (974)
T ss_pred ccceeeeEc--------------------------CC---------------------CcEEeeeeccccchhHHHhcCC
Confidence 998754210 00 0122356789999999999999
Q ss_pred CCCccchhhhhhHHHHHhhhCCC
Q 012988 311 GYGMECDWWSLGAIMYEMLVGYP 333 (452)
Q Consensus 311 ~~~~~~DiwSlGvil~elltG~~ 333 (452)
++++.+|.|.|+.+++-||.|+.
T Consensus 879 pWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 879 PWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred CCchhhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999964
No 427
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.84 E-value=3.8e-20 Score=169.81 Aligned_cols=139 Identities=23% Similarity=0.299 Sum_probs=114.8
Q ss_pred eceeccCCCeEEEEEEEccCCCEEEEEEeecchhc-----ccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEE
Q 012988 91 LTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMV-----KRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 91 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~ 165 (452)
++.||+|++|.||+|.. +|..+++|+....... .......+.+|+.++..+.|++|+....++.+....++||
T Consensus 1 ~~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 78 (211)
T PRK14879 1 MKLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVM 78 (211)
T ss_pred CcccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEE
Confidence 35799999999999986 6788999976533211 1112345778999999999998877777777777889999
Q ss_pred eecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccC
Q 012988 166 EYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPL 236 (452)
Q Consensus 166 E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~ 236 (452)
||++|++|.+++..... ....++.+++.+|.+||+.|++|||++|.|||++ ++.++|+|||++...
T Consensus 79 e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~ 144 (211)
T PRK14879 79 EYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEFS 144 (211)
T ss_pred EEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccCC
Confidence 99999999999865332 6778899999999999999999999999999999 889999999998753
No 428
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.83 E-value=6.1e-20 Score=166.88 Aligned_cols=134 Identities=21% Similarity=0.277 Sum_probs=107.3
Q ss_pred eeccCCCeEEEEEEEccCCCEEEEEEeecchhc-----ccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEee
Q 012988 93 IIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMV-----KRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEY 167 (452)
Q Consensus 93 ~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~ 167 (452)
.||+|+||+||+|. .+|..+++|+....... ......++.+|+.++..+.|+++.....++.+.+..++||||
T Consensus 1 ~ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence 48999999999998 46788999986543211 111235677899999999988755544455566677899999
Q ss_pred cCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccC
Q 012988 168 LPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPL 236 (452)
Q Consensus 168 ~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~ 236 (452)
++|++|.+++..... .++.+++.+|.+||+.|++|||++|.|||++ ++.++++|||++...
T Consensus 79 ~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 79 IEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred ECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 999999988754321 7899999999999999999999999999999 899999999998753
No 429
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.82 E-value=8.8e-20 Score=165.77 Aligned_cols=139 Identities=21% Similarity=0.193 Sum_probs=109.4
Q ss_pred eeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhccc-------------------chHHHHHHHHHHHHHhCCC--
Q 012988 88 FELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKR-------------------GQVEHVRAERNLLAEVASH-- 146 (452)
Q Consensus 88 y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~-------------------~~~~~~~~E~~il~~l~hp-- 146 (452)
|.+.+.||.|+||.||+|... +|+.||||++........ ........|..++..+.|+
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 778899999999999999874 799999999765321000 0112356788889998877
Q ss_pred ceeeEEEEEEcCCeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEE
Q 012988 147 CIVKLYYSFQDTEYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMK 226 (452)
Q Consensus 147 ~iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ik 226 (452)
.++..++ ....++||||++|++|..+... .....++.+++.++.++|+.||+||||||+||+++.++.++
T Consensus 96 ~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~ 165 (198)
T cd05144 96 PVPKPID----WNRHAVVMEYIDGVELYRVRVL------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIY 165 (198)
T ss_pred CCCceee----cCCceEEEEEeCCcchhhcccc------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEE
Confidence 4444443 2345899999999998765421 34567889999999999999999999999999999999999
Q ss_pred EeeccCCccCC
Q 012988 227 LSDFGLCKPLD 237 (452)
Q Consensus 227 l~DFGla~~~~ 237 (452)
|+|||++..+.
T Consensus 166 liDfg~~~~~~ 176 (198)
T cd05144 166 IIDWPQMVSTD 176 (198)
T ss_pred EEECCccccCC
Confidence 99999997664
No 430
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.80 E-value=3.2e-19 Score=160.46 Aligned_cols=140 Identities=18% Similarity=0.219 Sum_probs=101.1
Q ss_pred eceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHH---------------------HHHHHHHHHHHhCCCc--
Q 012988 91 LTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVE---------------------HVRAERNLLAEVASHC-- 147 (452)
Q Consensus 91 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~---------------------~~~~E~~il~~l~hp~-- 147 (452)
.+.||+|+||+||+|.+. +|+.||||++............ ....|...+..+.+..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 568999999999999876 8999999998754321111111 1135666666665443
Q ss_pred eeeEEEEEEcCCeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCCCcEEECCCCcEE
Q 012988 148 IVKLYYSFQDTEYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHK-HNYIHRDIKPDNLLLDKNGHMK 226 (452)
Q Consensus 148 iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~-~givHrDlkp~NILl~~~g~ik 226 (452)
+.+++++ ...++||||++|+.+........... ..++.++.+++.++.++|. .||+||||||+||+++ ++.++
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~~ 154 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVRLL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKVY 154 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhhhhhc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcEE
Confidence 4555543 23589999999854432111111111 6678899999999999999 9999999999999999 99999
Q ss_pred EeeccCCccCC
Q 012988 227 LSDFGLCKPLD 237 (452)
Q Consensus 227 l~DFGla~~~~ 237 (452)
|+|||.+....
T Consensus 155 liDfg~a~~~~ 165 (187)
T cd05119 155 IIDVPQAVEID 165 (187)
T ss_pred EEECccccccc
Confidence 99999998664
No 431
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.80 E-value=4.2e-19 Score=185.17 Aligned_cols=138 Identities=24% Similarity=0.292 Sum_probs=111.4
Q ss_pred eeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchh-----cccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEE
Q 012988 88 FELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEM-----VKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLY 162 (452)
Q Consensus 88 y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~ 162 (452)
|...+.||+|+||+||++... +..+++|+...... ......+.+.+|+.+++.++|++++....++.+....+
T Consensus 335 ~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~ 412 (535)
T PRK09605 335 KIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKT 412 (535)
T ss_pred cCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCE
Confidence 455789999999999998764 33455554322111 11122356889999999999999988877777777789
Q ss_pred EEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccC
Q 012988 163 LIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPL 236 (452)
Q Consensus 163 lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~ 236 (452)
+||||++|++|.+++. ....++.+++.+|.+||+.||+||||||+|||+ .++.++|+|||+++..
T Consensus 413 lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 413 IVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred EEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 9999999999999885 356789999999999999999999999999999 6789999999999864
No 432
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.80 E-value=1.8e-20 Score=183.59 Aligned_cols=181 Identities=27% Similarity=0.388 Sum_probs=136.1
Q ss_pred CeEEEEEeecCCCChHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCcc
Q 012988 159 EYLYLIMEYLPGGDMMTLLMRED---TLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKP 235 (452)
Q Consensus 159 ~~~~lV~E~~~ggsL~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~ 235 (452)
.++||.|++|...+|.++|.+.. ..+......++.|++.|++| +|.+|||+||.||+...++.+||.|||+...
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTS 405 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheee
Confidence 36899999999999999996543 35566788899999999999 9999999999999999999999999999775
Q ss_pred CCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCcc
Q 012988 236 LDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGME 315 (452)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~ 315 (452)
....... + ......+..+||+.||+||.+.+..|+.+
T Consensus 406 ~~~~~~~----------------~---------------------------~~~a~~t~~~gt~~YmsPEQi~g~~y~~k 442 (516)
T KOG1033|consen 406 QDKDETV----------------A---------------------------PAAASHTQQVGTLLYMSPEQIRGQQYSEK 442 (516)
T ss_pred cccCCcc----------------c---------------------------chhhhhhhcccccccCCHHHHhhhhhhhh
Confidence 4321100 0 01112345689999999999999999999
Q ss_pred chhhhhhHHHHHhhh-CCCCCCCCChHHHHHHHhhccCcccCCCCCCC-ChhHHHHHHHhhc-CccccCCCCCHHHHhcC
Q 012988 316 CDWWSLGAIMYEMLV-GYPPFYADDPITTCRKIVHWRNHLKFPDDSKL-SPEAKDLICRLLC-DVEHRLGTGGAHQIKAH 392 (452)
Q Consensus 316 ~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~-s~~~~dLi~~mL~-dp~~R~~~~~~~eil~h 392 (452)
+||||||+||+||+. -..+|. ....+..+.. -.+|..... -+...+|+.+||. .|.+|| ++.+.--|
T Consensus 443 vdIyaLGlil~EL~~~f~T~~e---r~~t~~d~r~----g~ip~~~~~d~p~e~~ll~~lls~~p~~RP---~~~~~~~~ 512 (516)
T KOG1033|consen 443 VDIYALGLILAELLIQFSTQFE---RIATLTDIRD----GIIPPEFLQDYPEEYTLLQQLLSPSPEERP---SAIEVALH 512 (516)
T ss_pred cchhhHHHHHHHHHHHhccHHH---HHHhhhhhhc----CCCChHHhhcCcHHHHHHHHhcCCCcccCc---hHHHHhhh
Confidence 999999999999997 333332 2222223322 233311111 2566799999998 999999 78888778
Q ss_pred CCc
Q 012988 393 PWF 395 (452)
Q Consensus 393 p~f 395 (452)
+|.
T Consensus 513 ~~~ 515 (516)
T KOG1033|consen 513 EFL 515 (516)
T ss_pred hhc
Confidence 775
No 433
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.75 E-value=1.9e-17 Score=154.38 Aligned_cols=138 Identities=20% Similarity=0.287 Sum_probs=105.6
Q ss_pred ceec-cCCCeEEEEEEEccCCCEEEEEEeecchh----cc------cchHHHHHHHHHHHHHhCCCce--eeEEEEEEcC
Q 012988 92 TIIG-RGAFGEVRLCREKKSGNIYAMKKLKKSEM----VK------RGQVEHVRAERNLLAEVASHCI--VKLYYSFQDT 158 (452)
Q Consensus 92 ~~LG-~G~~g~V~~a~~~~~~~~vavK~~~~~~~----~~------~~~~~~~~~E~~il~~l~hp~i--v~l~~~~~~~ 158 (452)
..|| .||.|+||.+... +..++||.+..... .. ......+.+|+.++..+.|++| +..+++....
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 3577 7888888887653 78899998865322 11 1223567889999999998774 6677664332
Q ss_pred -Ce---EEEEEeecCC-CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCC
Q 012988 159 -EY---LYLIMEYLPG-GDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLC 233 (452)
Q Consensus 159 -~~---~~lV~E~~~g-gsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla 233 (452)
.. .++|||+++| .+|.+++.. ..+++.. +.+++.+|.+||++||+||||||+|||++.++.++|+|||.+
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~ 189 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRG 189 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCc
Confidence 22 3599999997 688888754 4566543 578999999999999999999999999999999999999998
Q ss_pred ccC
Q 012988 234 KPL 236 (452)
Q Consensus 234 ~~~ 236 (452)
...
T Consensus 190 ~~~ 192 (239)
T PRK01723 190 ELR 192 (239)
T ss_pred ccC
Confidence 763
No 434
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.73 E-value=1.8e-17 Score=165.56 Aligned_cols=201 Identities=24% Similarity=0.289 Sum_probs=151.9
Q ss_pred HHHhCCCceeeEEEEEEcCCeEEEEEeecCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCe-eecCCCCCcE
Q 012988 140 LAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESIHKHNY-IHRDIKPDNL 217 (452)
Q Consensus 140 l~~l~hp~iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~gi-vHrDlkp~NI 217 (452)
|+.+.|.|+.++++.+.+....++|.+||..|+|.+.+.. .-.++......+++.++.||.|||...| .|+.+++.|.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC 80 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC 80 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence 3567899999999999999999999999999999999976 3457777777889999999999999765 9999999999
Q ss_pred EECCCCcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhcccccccccc
Q 012988 218 LLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVG 297 (452)
Q Consensus 218 Ll~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 297 (452)
++|....+||+|||+......... ........-
T Consensus 81 lvd~~w~lklt~~Gl~~~~~~~~~-----------------------------------------------~~~~~~~~~ 113 (484)
T KOG1023|consen 81 LVDSRWVLKLTDFGLNSLLEETAE-----------------------------------------------PEAHHPIRK 113 (484)
T ss_pred eeeeeEEEEechhhhccccccccc-----------------------------------------------ccccchhHH
Confidence 999999999999999775421000 000001112
Q ss_pred CCccccchhccCCC-------CCccchhhhhhHHHHHhhhCCCCCCCC----ChHHHHHHHhhccCcccCCCCC---CCC
Q 012988 298 TPDYIAPEVLLKKG-------YGMECDWWSLGAIMYEMLVGYPPFYAD----DPITTCRKIVHWRNHLKFPDDS---KLS 363 (452)
Q Consensus 298 t~~y~APE~~~~~~-------~~~~~DiwSlGvil~elltG~~Pf~~~----~~~~~~~~i~~~~~~~~~p~~~---~~s 363 (452)
...|.|||.+.... .+.+.||||+|++++|+++...||... ++.+....+.........|... .+.
T Consensus 114 ~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~ 193 (484)
T KOG1023|consen 114 ALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELP 193 (484)
T ss_pred HHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcc
Confidence 34699999997631 366799999999999999999999752 2233444444422322333321 455
Q ss_pred hhHHHHHHHhhc-CccccCCCCCHHHHh
Q 012988 364 PEAKDLICRLLC-DVEHRLGTGGAHQIK 390 (452)
Q Consensus 364 ~~~~dLi~~mL~-dp~~R~~~~~~~eil 390 (452)
+++..++.+|+. +|.+|| ++++|.
T Consensus 194 ~~l~~l~~~cw~e~P~~rP---s~~~i~ 218 (484)
T KOG1023|consen 194 PELLLLVARCWEEIPEKRP---SIEQIR 218 (484)
T ss_pred hHHHHHHHHhcccChhhCc---cHHHHH
Confidence 678999999998 999999 555543
No 435
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.73 E-value=4.2e-17 Score=140.36 Aligned_cols=133 Identities=20% Similarity=0.258 Sum_probs=112.7
Q ss_pred EeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCC--CceeeEEEEEEcCCeEEEEEee
Q 012988 90 LLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVAS--HCIVKLYYSFQDTEYLYLIMEY 167 (452)
Q Consensus 90 i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h--p~iv~l~~~~~~~~~~~lV~E~ 167 (452)
+++.||.|.++.||++... +..+++|++..... ...+..|..++..+.+ .++++++.++...+..+++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 4678999999999999874 37899998765422 3567889999999977 5899999998888889999999
Q ss_pred cCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCCCcEEECCCCcEEEeeccCCccC
Q 012988 168 LPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKH---NYIHRDIKPDNLLLDKNGHMKLSDFGLCKPL 236 (452)
Q Consensus 168 ~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NILl~~~g~ikl~DFGla~~~ 236 (452)
++|+.+..+ +......++.+++.+|.+||.. +++|+||+|+|||++.++.++++|||.+...
T Consensus 75 ~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 75 IEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred cCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 998877654 4556677889999999999985 7999999999999999999999999998754
No 436
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.66 E-value=6.3e-17 Score=161.73 Aligned_cols=259 Identities=20% Similarity=0.224 Sum_probs=195.0
Q ss_pred CCCeeEeceecc--CCCeEEEEEEE--ccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEEcCC
Q 012988 85 VDDFELLTIIGR--GAFGEVRLCRE--KKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQDTE 159 (452)
Q Consensus 85 ~~~y~i~~~LG~--G~~g~V~~a~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~ 159 (452)
...|.+...+|. |.+|.||.+.. ..++..+|+|.-+..- .......+-.+|+.-...+ .|++.++.+..|...+
T Consensus 113 ~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~-s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~ 191 (524)
T KOG0601|consen 113 DQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPF-SPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSG 191 (524)
T ss_pred hhhcccccccccCCCCCceeecccCCcccCCcccccccccCCC-CCccccccccchhhcccccCccccccccCcccccCC
Confidence 345788899999 99999999998 8889999999743221 1111112233455555555 4889999999999999
Q ss_pred eEEEEEeecCCCChHHHHHhcC-CCCHHHHHHHHHHHHH----HHHHHHHCCeeecCCCCCcEEECCC-CcEEEeeccCC
Q 012988 160 YLYLIMEYLPGGDMMTLLMRED-TLTENVARFYIAQSVL----AIESIHKHNYIHRDIKPDNLLLDKN-GHMKLSDFGLC 233 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~~~-~~~~~~~~~~~~ql~~----aL~~LH~~givHrDlkp~NILl~~~-g~ikl~DFGla 233 (452)
..|+-+|+| +.+|..+..... .+++..++.++.+... ||.++|+.+++|-|+||+||++..+ ...+++|||+.
T Consensus 192 ~lfiqtE~~-~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v 270 (524)
T KOG0601|consen 192 ILFIQTELC-GESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLV 270 (524)
T ss_pred cceeeeccc-cchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCccee
Confidence 999999999 678888876654 4899999999999999 9999999999999999999999999 78999999999
Q ss_pred ccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCC
Q 012988 234 KPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYG 313 (452)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~ 313 (452)
..+..+....... ......|...|++||.+. .-++
T Consensus 271 ~~i~~~~~~~~~~--------------------------------------------~~~r~~~~~~Y~~ke~~~-~l~~ 305 (524)
T KOG0601|consen 271 SKISDGNFSSVFK--------------------------------------------VSKRPEGDCIYAAKELLN-GLAT 305 (524)
T ss_pred EEccCCcccccee--------------------------------------------eeecCCCCceEeChhhhc-cccc
Confidence 8876443221110 011224677899999874 5678
Q ss_pred ccchhhhhhHHHHHhhhCCCCCCCC--ChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHh
Q 012988 314 MECDWWSLGAIMYEMLVGYPPFYAD--DPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIK 390 (452)
Q Consensus 314 ~~~DiwSlGvil~elltG~~Pf~~~--~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil 390 (452)
...|+||||.++.+-.+|..++... +.+..+.+.. ++.......+.++...+..|+. +|.-|+ +++.++
T Consensus 306 ~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~-----ip~e~~~~~s~~l~~~~~~~~d~~~~~~~---~~q~~~ 377 (524)
T KOG0601|consen 306 FASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY-----IPLEFCEGGSSSLRSVTSQMLDEDPRLRL---TAQILT 377 (524)
T ss_pred hHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc-----CchhhhcCcchhhhhHHHHhcCcchhhhh---HHHHHh
Confidence 9999999999999999987776544 3333332222 1111223456777778999998 888899 899999
Q ss_pred cCCCcCCC
Q 012988 391 AHPWFKDV 398 (452)
Q Consensus 391 ~hp~f~~~ 398 (452)
+|++....
T Consensus 378 ~l~~i~s~ 385 (524)
T KOG0601|consen 378 ALNVIHSK 385 (524)
T ss_pred ccccccch
Confidence 99998753
No 437
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.61 E-value=7.1e-16 Score=157.88 Aligned_cols=145 Identities=18% Similarity=0.316 Sum_probs=98.1
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcc-------------------------------cchHHHHH
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVK-------------------------------RGQVEHVR 134 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~-------------------------------~~~~~~~~ 134 (452)
.+|+. +.||+|++|+||+|+.+.+|+.||||++.+.-... ......+.
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 45776 78999999999999998889999999997542100 01122233
Q ss_pred HHHHHHH------HhC----CCceeeEEEEEE-cCCeEEEEEeecCCCChHHH--HHhcC----CCCHHHHHHHHHHHHH
Q 012988 135 AERNLLA------EVA----SHCIVKLYYSFQ-DTEYLYLIMEYLPGGDMMTL--LMRED----TLTENVARFYIAQSVL 197 (452)
Q Consensus 135 ~E~~il~------~l~----hp~iv~l~~~~~-~~~~~~lV~E~~~ggsL~~~--l~~~~----~~~~~~~~~~~~ql~~ 197 (452)
+|+++++ ++. +...+.+-.++. -....+|||||+.|+.+.++ +...+ .+.+..+..++.|++
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif- 277 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF- 277 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH-
Confidence 3444333 331 222222222222 23456799999999999774 33333 244555555666654
Q ss_pred HHHHHHHCCeeecCCCCCcEEECCCC----cEEEeeccCCccCCC
Q 012988 198 AIESIHKHNYIHRDIKPDNLLLDKNG----HMKLSDFGLCKPLDC 238 (452)
Q Consensus 198 aL~~LH~~givHrDlkp~NILl~~~g----~ikl~DFGla~~~~~ 238 (452)
..|++|+|+||.||+++.+| .++++|||++..++.
T Consensus 278 ------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 278 ------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred ------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 58999999999999999988 999999999987753
No 438
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.57 E-value=2.4e-14 Score=144.90 Aligned_cols=140 Identities=19% Similarity=0.297 Sum_probs=96.4
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcc--c-----------------------------chH------HHHH
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVK--R-----------------------------GQV------EHVR 134 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~--~-----------------------------~~~------~~~~ 134 (452)
+.||.|++|.||+|+. .+|+.||||+.+...... . ... -++.
T Consensus 123 ~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 5799999999999986 479999999986531000 0 000 0234
Q ss_pred HHHHHHHHhC-----CCce--eeEEEEEEcCCeEEEEEeecCCCChHHHHHhc-CCCCHHHHHHHHHHHHH-HHHHHHHC
Q 012988 135 AERNLLAEVA-----SHCI--VKLYYSFQDTEYLYLIMEYLPGGDMMTLLMRE-DTLTENVARFYIAQSVL-AIESIHKH 205 (452)
Q Consensus 135 ~E~~il~~l~-----hp~i--v~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~-~~~~~~~~~~~~~ql~~-aL~~LH~~ 205 (452)
+|...+..+. ++++ .+.+ +......++||||++|++|.++.... ...+ ...++..++. .+..+|..
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~--~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVY--WDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEe--hhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhC
Confidence 4555555542 3332 2333 22234568999999999998876432 1222 2334555554 47789999
Q ss_pred CeeecCCCCCcEEECCCCcEEEeeccCCccCC
Q 012988 206 NYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLD 237 (452)
Q Consensus 206 givHrDlkp~NILl~~~g~ikl~DFGla~~~~ 237 (452)
|++|+|+||.||+++.+|.++|+|||++..+.
T Consensus 277 g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 277 GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 99999999999999999999999999998775
No 439
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.55 E-value=3.7e-15 Score=149.17 Aligned_cols=254 Identities=24% Similarity=0.240 Sum_probs=188.1
Q ss_pred CCCCCCCeeEeceeccCCCeEEEEEEEc-cCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEEEEcC
Q 012988 81 HKICVDDFELLTIIGRGAFGEVRLCREK-KSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYSFQDT 158 (452)
Q Consensus 81 ~~~~~~~y~i~~~LG~G~~g~V~~a~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~ 158 (452)
......+|..+..||.|.|+.|+.+..+ .++..|++|.+.+........+. -..|+.+...+ .|.++++.+..|...
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~-sl~ev~l~~~l~~~~~~~g~~~~W~~~ 338 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIF-SLGEVILEAILGSHLPSVGKNSSWSQL 338 (524)
T ss_pred ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhc-chhhhhHhhHhhcccccCCCCCCcccc
Confidence 3445678999999999999999987755 67889999987665333222222 23466666666 588999999999888
Q ss_pred CeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCC-CcEEEeeccCCccCC
Q 012988 159 EYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKN-GHMKLSDFGLCKPLD 237 (452)
Q Consensus 159 ~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~-g~ikl~DFGla~~~~ 237 (452)
+..|+-.|||.++++...+.....+.+...+.+..|++.++.++|+..++|+|+||+||++..+ +..++.|||++..+.
T Consensus 339 r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~ 418 (524)
T KOG0601|consen 339 RQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLA 418 (524)
T ss_pred ccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccccc
Confidence 8899999999999988777555678888899999999999999999999999999999999886 788999999986432
Q ss_pred CCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCcc-ccchhccCCCCCccc
Q 012988 238 CSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDY-IAPEVLLKKGYGMEC 316 (452)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y-~APE~~~~~~~~~~~ 316 (452)
.... ....++..| .+++......+..++
T Consensus 419 ~~~~---------------------------------------------------~~~~~~r~~p~~~~~~e~~~~~~~~ 447 (524)
T KOG0601|consen 419 FSSG---------------------------------------------------VFHHIDRLYPIAEILLEDYPHLSKA 447 (524)
T ss_pred eecc---------------------------------------------------cccccccccccchhhcccccccccc
Confidence 1100 011123334 355555667889999
Q ss_pred hhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCc
Q 012988 317 DWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWF 395 (452)
Q Consensus 317 DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f 395 (452)
|++|||.-+.+.++|...-...... ..|.. -..|.....+.++..+.+.|+. ++..|+ .+.++..|+=|
T Consensus 448 ~~~sl~~~~~e~~~~~~ls~~~~~~---~~i~~----~~~p~~~~~~~~~q~~~kv~~~~~~~~~~---l~~~l~~~~~~ 517 (524)
T KOG0601|consen 448 DIFSLGLSVDEAITGSPLSESGVQS---LTIRS----GDTPNLPGLKLQLQVLLKVMINPDRKRRP---SAVELSLHSEF 517 (524)
T ss_pred ccccccccccccccCcccCcccccc---eeeec----ccccCCCchHHhhhhhhhhhcCCccccch---hhhhhcccchh
Confidence 9999999999999997654333222 12221 1223333455788888888887 888888 78888887766
Q ss_pred C
Q 012988 396 K 396 (452)
Q Consensus 396 ~ 396 (452)
.
T Consensus 518 ~ 518 (524)
T KOG0601|consen 518 Y 518 (524)
T ss_pred h
Confidence 4
No 440
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.53 E-value=1.8e-13 Score=122.46 Aligned_cols=141 Identities=14% Similarity=0.127 Sum_probs=103.3
Q ss_pred eceeccCCCeEEEEEEEcc------CCCEEEEEEeecchhc-------------------ccchHHH----HHHHHHHHH
Q 012988 91 LTIIGRGAFGEVRLCREKK------SGNIYAMKKLKKSEMV-------------------KRGQVEH----VRAERNLLA 141 (452)
Q Consensus 91 ~~~LG~G~~g~V~~a~~~~------~~~~vavK~~~~~~~~-------------------~~~~~~~----~~~E~~il~ 141 (452)
...||.|-=+.||.|.... .+..+|||+.+..... +.+.... ..+|...|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3578999999999997543 3579999988532100 0111222 348999999
Q ss_pred HhCC--CceeeEEEEEEcCCeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HHCCeeecCCCCCcEE
Q 012988 142 EVAS--HCIVKLYYSFQDTEYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESI-HKHNYIHRDIKPDNLL 218 (452)
Q Consensus 142 ~l~h--p~iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~L-H~~givHrDlkp~NIL 218 (452)
++.. -+++..+++ ..-+|||||+.++.+..-..+...+++..+..+..+++.+|..| |..||||+||++.|||
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL 157 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNML 157 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 9864 466677764 34579999997654433222344566667777889999999999 8999999999999999
Q ss_pred ECCCCcEEEeeccCCccC
Q 012988 219 LDKNGHMKLSDFGLCKPL 236 (452)
Q Consensus 219 l~~~g~ikl~DFGla~~~ 236 (452)
++ +|.+.|+|||.+-..
T Consensus 158 ~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 158 WH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred EE-CCcEEEEECCCceeC
Confidence 97 578999999998765
No 441
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.52 E-value=5.9e-14 Score=123.91 Aligned_cols=129 Identities=20% Similarity=0.251 Sum_probs=96.8
Q ss_pred eceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCce-eeEEEEEEcCCeEEEEEeecC
Q 012988 91 LTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCI-VKLYYSFQDTEYLYLIMEYLP 169 (452)
Q Consensus 91 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i-v~l~~~~~~~~~~~lV~E~~~ 169 (452)
++.|+.|.++.||++... +..|++|+...... .......|+.+++.+.+.++ ++++.... ...++||||++
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecC
Confidence 467899999999998754 78899998754321 11235678999998865544 45555433 23579999999
Q ss_pred CCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe-----eecCCCCCcEEECCCCcEEEeeccCCccC
Q 012988 170 GGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNY-----IHRDIKPDNLLLDKNGHMKLSDFGLCKPL 236 (452)
Q Consensus 170 ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~gi-----vHrDlkp~NILl~~~g~ikl~DFGla~~~ 236 (452)
|.++... ......++.+++.+|..||..++ +|+|++|.||+++ ++.++++|||.+...
T Consensus 75 G~~l~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~~ 137 (170)
T cd05151 75 GSELLTE--------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGMN 137 (170)
T ss_pred CCccccc--------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccCC
Confidence 9887643 11123457899999999999885 9999999999999 678999999998753
No 442
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.51 E-value=3.2e-14 Score=132.02 Aligned_cols=212 Identities=20% Similarity=0.242 Sum_probs=151.0
Q ss_pred HHHHHHhCCCceeeEEEEEEcCC-----eEEEEEeecCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC--
Q 012988 137 RNLLAEVASHCIVKLYYSFQDTE-----YLYLIMEYLPGGDMMTLLMR----EDTLTENVARFYIAQSVLAIESIHKH-- 205 (452)
Q Consensus 137 ~~il~~l~hp~iv~l~~~~~~~~-----~~~lV~E~~~ggsL~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~-- 205 (452)
..-|-.+.|.|||++..||.+.. .+.++.|||..|+|..+|++ ...+.....++|+-||+.||.|||+.
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~P 197 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCC
Confidence 44566678999999999987654 48899999999999999965 34688888999999999999999998
Q ss_pred CeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhh
Q 012988 206 NYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQ 285 (452)
Q Consensus 206 givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (452)
-|+|+++.-.-|++..+|-+||.--.... ...+ .. .
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~s-~h~s--------~~--------------------------~--------- 233 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDS-THPS--------VN--------------------------S--------- 233 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCccc-cchh--------hh--------------------------h---------
Confidence 59999999999999999988885211110 0000 00 0
Q ss_pred hhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhhhCCCCC-CCCChHHHHHHHhhccCcccCCCCCCCCh
Q 012988 286 MNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF-YADDPITTCRKIVHWRNHLKFPDDSKLSP 364 (452)
Q Consensus 286 ~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~elltG~~Pf-~~~~~~~~~~~i~~~~~~~~~p~~~~~s~ 364 (452)
.+.....-..|-++|.|||.=.....+.++|||++|+...+|..|..-- .+.+....-..|.+-...+. .+
T Consensus 234 -~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~le-------n~ 305 (458)
T KOG1266|consen 234 -TREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGLE-------NG 305 (458)
T ss_pred -hhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeecc-------Cc
Confidence 0000011224678899999866667788999999999999999887653 22222222222222111111 13
Q ss_pred hHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCCCcccc
Q 012988 365 EAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDVVWDKL 403 (452)
Q Consensus 365 ~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~~~~~l 403 (452)
--+++|.+||. .|..|| ++.+++.||.+-++.-.++
T Consensus 306 lqr~~i~kcl~~eP~~rp---~ar~llfHpllfeVhslkl 342 (458)
T KOG1266|consen 306 LQRGSITKCLEGEPNGRP---DARLLLFHPLLFEVHSLKL 342 (458)
T ss_pred cccCcCcccccCCCCCCc---chhhhhcCceeeecchHHH
Confidence 34679999999 999999 9999999999877654443
No 443
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.43 E-value=1.1e-12 Score=132.70 Aligned_cols=140 Identities=16% Similarity=0.193 Sum_probs=111.6
Q ss_pred eeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEee
Q 012988 88 FELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEY 167 (452)
Q Consensus 88 y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~ 167 (452)
|.+ ...+-++.+..-.|..+.++.+|.|.+++.... .....+.+-+.-|+.++||||+++++.++.++.+|+|+|-
T Consensus 15 Y~l-e~~~~~~~a~~~~~t~k~~~~~vsVF~~~~~~~---~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTEr 90 (690)
T KOG1243|consen 15 YDL-EETAFSSEALWPDGTRKADGGPVSVFVYKRSNG---EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTER 90 (690)
T ss_pred ccc-ccccCCCcccccccceeccCCceEEEEEeCCCc---hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeec
Confidence 555 333334444322466678899999998876532 3345577788899999999999999999999999999999
Q ss_pred cCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCeeecCCCCCcEEECCCCcEEEeeccCCccC
Q 012988 168 LPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIH-KHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPL 236 (452)
Q Consensus 168 ~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH-~~givHrDlkp~NILl~~~g~ikl~DFGla~~~ 236 (452)
+. .|..++... ....+...+.||+.||.||| .++++|++|.-..|+++..|+.||++|.++...
T Consensus 91 V~--Pl~~~lk~l---~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~ 155 (690)
T KOG1243|consen 91 VR--PLETVLKEL---GKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKA 155 (690)
T ss_pred cc--cHHHHHHHh---HHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEecc
Confidence 84 566666543 37778888999999999998 578999999999999999999999999987653
No 444
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.42 E-value=2.4e-12 Score=111.50 Aligned_cols=134 Identities=22% Similarity=0.259 Sum_probs=99.9
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEe-ecc----hhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEe
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKL-KKS----EMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIME 166 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~-~~~----~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E 166 (452)
..+++|+=+.||.+... |..+.+|.= +|. .+..+-...+..+|+.++..+.--.|.-.+-++.+.....|+||
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME 79 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence 45789999999988553 445666642 222 12222223567789999999876666555556667777889999
Q ss_pred ecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCcc
Q 012988 167 YLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKP 235 (452)
Q Consensus 167 ~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~ 235 (452)
|++|-.|.+.+... . ..++..+-.-+.-||..||+|+||.++||++..++ +.++||||++.
T Consensus 80 ~I~G~~lkd~l~~~---~----~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 80 YIEGELLKDALEEA---R----PDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred EeCChhHHHHHHhc---c----hHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 99999998888655 2 33566666677789999999999999999997765 99999999885
No 445
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.33 E-value=2.1e-11 Score=105.11 Aligned_cols=144 Identities=24% Similarity=0.293 Sum_probs=106.2
Q ss_pred EeceeccCCCeEEEEEEEccCCCEEEEEEe-ec----chhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEE
Q 012988 90 LLTIIGRGAFGEVRLCREKKSGNIYAMKKL-KK----SEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 90 i~~~LG~G~~g~V~~a~~~~~~~~vavK~~-~~----~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV 164 (452)
.+..|-+|+-+.|+++.. .|+.+.||.= .| ..+...-...+..+|+.+|.++.--.|.-..-+|.|...-+|+
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY 88 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence 567888999999998765 5888888842 22 2222222345678899999988655554444456666777899
Q ss_pred EeecCC-CChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCC---cEEEeeccCCcc
Q 012988 165 MEYLPG-GDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNG---HMKLSDFGLCKP 235 (452)
Q Consensus 165 ~E~~~g-gsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g---~ikl~DFGla~~ 235 (452)
|||++| .++.+++... ..........++..+-..+.-||.++|||+||..+||++.++| .+.|+|||++..
T Consensus 89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 999977 4777887653 2333333367888999999999999999999999999998877 358999999863
No 446
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.31 E-value=1.5e-11 Score=113.23 Aligned_cols=141 Identities=16% Similarity=0.222 Sum_probs=104.5
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCC--ceeeEEEEEEcC---CeEEEEEe
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASH--CIVKLYYSFQDT---EYLYLIME 166 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp--~iv~l~~~~~~~---~~~~lV~E 166 (452)
+.||.|.++.||++... +|..|++|+....... .....+..|..+++.+.+. .+++++.+.... +..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 56899999999998764 3688999987654321 1234678899999999763 467777776653 36789999
Q ss_pred ecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH------------------------------------------
Q 012988 167 YLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHK------------------------------------------ 204 (452)
Q Consensus 167 ~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~------------------------------------------ 204 (452)
|++|.++...+.. ..+++.....++.+++.+|..||+
T Consensus 81 ~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 81 RVDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred EeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 9999888765421 345666666666777777777763
Q ss_pred --------------CCeeecCCCCCcEEECC--CCcEEEeeccCCccC
Q 012988 205 --------------HNYIHRDIKPDNLLLDK--NGHMKLSDFGLCKPL 236 (452)
Q Consensus 205 --------------~givHrDlkp~NILl~~--~g~ikl~DFGla~~~ 236 (452)
..++|+|++|.|||++. ++.+.|+||+.+...
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g 207 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLG 207 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccC
Confidence 24699999999999998 667899999988753
No 447
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.27 E-value=4e-12 Score=129.29 Aligned_cols=169 Identities=22% Similarity=0.375 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHHHC-CeeecCCCCCcEEECCCCcEEEeeccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCC
Q 012988 192 IAQSVLAIESIHKH-NYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDN 270 (452)
Q Consensus 192 ~~ql~~aL~~LH~~-givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (452)
+.+++.||.|+|.. ++||++|.|++|.++.+|..||+.|+++.....+..+...+
T Consensus 105 l~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~------------------------ 160 (700)
T KOG2137|consen 105 LGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSE------------------------ 160 (700)
T ss_pred hhcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCcccccc------------------------
Confidence 34455899999975 89999999999999999999999999877554322110000
Q ss_pred CCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhhhhHHHHHhh-hCCCCCCCCChHHHHHHHhh
Q 012988 271 KSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML-VGYPPFYADDPITTCRKIVH 349 (452)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwSlGvil~ell-tG~~Pf~~~~~~~~~~~i~~ 349 (452)
|. .....-..-...|.|||++.+...+.++|+|||||++|.+. .|+..+...+....+..-..
T Consensus 161 -------------yd---~~lp~~~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~ 224 (700)
T KOG2137|consen 161 -------------YD---PPLPLLLQPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRN 224 (700)
T ss_pred -------------CC---CCCChhhccCcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhc
Confidence 00 00111223456799999999988899999999999999999 55555554433333322222
Q ss_pred ccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCCCCcccc
Q 012988 350 WRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKDVVWDKL 403 (452)
Q Consensus 350 ~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~~~~~~l 403 (452)
..+--.+-....++.++++=|.++|. ++..|| ++..++.-|||.+.--..|
T Consensus 225 ~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp---~~~~l~~~~ff~D~~~~aL 276 (700)
T KOG2137|consen 225 LLNAGAFGYSNNLPSELRESLKKLLNGDSAVRP---TLDLLLSIPFFSDPGLKAL 276 (700)
T ss_pred ccccccccccccCcHHHHHHHHHHhcCCcccCc---chhhhhcccccCCchhhhh
Confidence 11111222235789999999999998 999999 8999999999998654444
No 448
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.26 E-value=1.9e-10 Score=113.39 Aligned_cols=210 Identities=17% Similarity=0.228 Sum_probs=152.1
Q ss_pred CeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEE----cCCeEEEEEeecCC-CCh
Q 012988 99 FGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQ----DTEYLYLIMEYLPG-GDM 173 (452)
Q Consensus 99 ~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~----~~~~~~lV~E~~~g-gsL 173 (452)
-.+.|+|....+|..|++|++.-......+ ....-+++++++.|+|||++.++|. .+..+++|++|.++ ++|
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~n---k~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTN---KDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcc---cchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence 468899999999999999999543332222 2334578899999999999999987 34579999999876 677
Q ss_pred HHHHHh---------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCC
Q 012988 174 MTLLMR---------------EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDC 238 (452)
Q Consensus 174 ~~~l~~---------------~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~ 238 (452)
.++... +...+|..++.|+.|+..||.++|+.|+.-+-|.|.+||++.+-+++|+.-|....+..
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 776532 23477899999999999999999999999999999999999888899987776544321
Q ss_pred CcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchh
Q 012988 239 STLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDW 318 (452)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~Di 318 (452)
.. + +-+.. -.+-|.
T Consensus 446 d~--------------------------------------------------------~-------~~le~---~Qq~D~ 459 (655)
T KOG3741|consen 446 DP--------------------------------------------------------T-------EPLES---QQQNDL 459 (655)
T ss_pred CC--------------------------------------------------------C-------cchhH---HhhhhH
Confidence 10 0 01111 135789
Q ss_pred hhhhHHHHHhhhCCCCCCC-CChHHH-HHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHHhcC
Q 012988 319 WSLGAIMYEMLVGYPPFYA-DDPITT-CRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAH 392 (452)
Q Consensus 319 wSlGvil~elltG~~Pf~~-~~~~~~-~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~h 392 (452)
=.||.+++.|.||..--.. ...... ...|. ..+|.+++++|.-+.. ++.+ . ++.+++.|
T Consensus 460 ~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I~-----------~~yS~D~rn~v~yl~s~~~~~-k---sI~~llp~ 521 (655)
T KOG3741|consen 460 RDLGLLLLALATGTENSNRTDSTQSSHLTRIT-----------TTYSTDLRNVVEYLESLNFRE-K---SIQDLLPM 521 (655)
T ss_pred HHHHHHHHHHhhcccccccccchHHHHHHHhh-----------hhhhHHHHHHHHHHHhcCccc-c---cHHHHHHH
Confidence 9999999999999654222 222222 33332 2578889988887776 6665 3 46666654
No 449
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.13 E-value=2.4e-09 Score=101.23 Aligned_cols=133 Identities=14% Similarity=0.097 Sum_probs=94.7
Q ss_pred EEEEEEEccCCCEEEEEEeecchhc---cc-----chHHHHHHHHHHHHHhCCC--ceeeEEEEEEc-----CCeEEEEE
Q 012988 101 EVRLCREKKSGNIYAMKKLKKSEMV---KR-----GQVEHVRAERNLLAEVASH--CIVKLYYSFQD-----TEYLYLIM 165 (452)
Q Consensus 101 ~V~~a~~~~~~~~vavK~~~~~~~~---~~-----~~~~~~~~E~~il~~l~hp--~iv~l~~~~~~-----~~~~~lV~ 165 (452)
.|..+. -.|+.|.||........ +. .-.....+|...+..+..- .++..+.++.. ....++||
T Consensus 37 rvvr~~--~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt 114 (268)
T PRK15123 37 RTLRFE--LAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT 114 (268)
T ss_pred eEEEEE--ECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence 355443 35778999976432210 00 1112467888888888433 34444555543 23578999
Q ss_pred eecCCC-ChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECC-------CCcEEEeeccCCcc
Q 012988 166 EYLPGG-DMMTLLMR--EDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDK-------NGHMKLSDFGLCKP 235 (452)
Q Consensus 166 E~~~gg-sL~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~-------~g~ikl~DFGla~~ 235 (452)
|++++. +|.+++.. ....+......++.+++..+.-||..||+|+|+++.|||++. ++.+.|+||+.+..
T Consensus 115 e~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 115 EDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred eeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 999876 78888753 345566778889999999999999999999999999999985 46799999998863
No 450
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.10 E-value=5e-10 Score=99.92 Aligned_cols=128 Identities=20% Similarity=0.235 Sum_probs=83.1
Q ss_pred EEEEEEEccCCCEEEEEEeecchhc-----------------------ccchHHHHHHHHHHHHHhCCC--ceeeEEEEE
Q 012988 101 EVRLCREKKSGNIYAMKKLKKSEMV-----------------------KRGQVEHVRAERNLLAEVASH--CIVKLYYSF 155 (452)
Q Consensus 101 ~V~~a~~~~~~~~vavK~~~~~~~~-----------------------~~~~~~~~~~E~~il~~l~hp--~iv~l~~~~ 155 (452)
.||.|.. .+|..+|||+.+..... .........+|...|..+..- ++++.+.+.
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 3888875 56789999987542100 001134578899999999765 566776553
Q ss_pred EcCCeEEEEEeecC--CCChHHHHHhcCCCCHHHHHHHHHHHHHHHHH-HHHCCeeecCCCCCcEEECCCCcEEEeeccC
Q 012988 156 QDTEYLYLIMEYLP--GGDMMTLLMREDTLTENVARFYIAQSVLAIES-IHKHNYIHRDIKPDNLLLDKNGHMKLSDFGL 232 (452)
Q Consensus 156 ~~~~~~~lV~E~~~--ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~-LH~~givHrDlkp~NILl~~~g~ikl~DFGl 232 (452)
.-+|||||++ |..+..+... .++......++.+++..+.. +|..||+|+||.+.|||++.+ .+.|+|||.
T Consensus 80 ----~~~ivME~I~~~G~~~~~l~~~--~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf~q 152 (188)
T PF01163_consen 80 ----RNVIVMEYIGEDGVPLPRLKDV--DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDFGQ 152 (188)
T ss_dssp ----TTEEEEE--EETTEEGGCHHHC--GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--GTT
T ss_pred ----CCEEEEEecCCCccchhhHHhc--cccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEecCc
Confidence 2369999998 5555443321 22244566677888885555 579999999999999999887 899999998
Q ss_pred CccC
Q 012988 233 CKPL 236 (452)
Q Consensus 233 a~~~ 236 (452)
+...
T Consensus 153 av~~ 156 (188)
T PF01163_consen 153 AVDS 156 (188)
T ss_dssp EEET
T ss_pred ceec
Confidence 8754
No 451
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.96 E-value=1.1e-08 Score=93.27 Aligned_cols=107 Identities=22% Similarity=0.266 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHhCCC--ceeeEEEEEEcC----CeEEEEEeecCCC-ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 012988 130 VEHVRAERNLLAEVASH--CIVKLYYSFQDT----EYLYLIMEYLPGG-DMMTLLMREDTLTENVARFYIAQSVLAIESI 202 (452)
Q Consensus 130 ~~~~~~E~~il~~l~hp--~iv~l~~~~~~~----~~~~lV~E~~~gg-sL~~~l~~~~~~~~~~~~~~~~ql~~aL~~L 202 (452)
.....+|...+..+..- .+++.+++.... ...++|+|++++. +|.+++......+......++.+++..+.-|
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~l 134 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKL 134 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHH
Confidence 34577888888877533 355566665542 2468999999874 7999987755577778889999999999999
Q ss_pred HHCCeeecCCCCCcEEECCCC---cEEEeeccCCccC
Q 012988 203 HKHNYIHRDIKPDNLLLDKNG---HMKLSDFGLCKPL 236 (452)
Q Consensus 203 H~~givHrDlkp~NILl~~~g---~ikl~DFGla~~~ 236 (452)
|..||+|+|+++.|||++.++ .+.|+||+-++..
T Consensus 135 H~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 135 HDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 999999999999999999887 8999999988753
No 452
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.96 E-value=2.3e-08 Score=96.58 Aligned_cols=232 Identities=15% Similarity=0.155 Sum_probs=146.3
Q ss_pred EeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHh-CCCceeeEEEE------EEcCC-eE
Q 012988 90 LLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEV-ASHCIVKLYYS------FQDTE-YL 161 (452)
Q Consensus 90 i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~------~~~~~-~~ 161 (452)
..+.||+|+-+.+|-.-. -...+.|++.+...... ...+..|... .||-+-.-+.+ .-+.+ .+
T Consensus 15 ~gr~LgqGgea~ly~l~e---~~d~VAKIYh~Pppa~~------aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~i 85 (637)
T COG4248 15 PGRPLGQGGEADLYTLGE---VRDQVAKIYHAPPPAAQ------AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVI 85 (637)
T ss_pred CCccccCCccceeeecch---hhchhheeecCCCchHH------HHHHHHhccCCCCcchhhhhcccHHHhhCCCcccee
Confidence 456899999999995422 22345687765432111 1122233333 45533221111 11222 37
Q ss_pred EEEEeecCCCCh-HHHH------HhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCc
Q 012988 162 YLIMEYLPGGDM-MTLL------MREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCK 234 (452)
Q Consensus 162 ~lV~E~~~ggsL-~~~l------~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~ 234 (452)
-++|..++|-.- ..++ +....+....+.+.++.++.+..-||..|.+-+|+.++|+|+++++.+.|.|=....
T Consensus 86 GflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfq 165 (637)
T COG4248 86 GFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQ 165 (637)
T ss_pred EEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEccccee
Confidence 788998876422 2222 112346677888899999999999999999999999999999999999998744322
Q ss_pred cCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhcc-----C
Q 012988 235 PLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLL-----K 309 (452)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~-----~ 309 (452)
...++ ......+|...|.+||.-. +
T Consensus 166 i~~ng--------------------------------------------------~~~~cpVg~~eftPPElQ~~~sf~g 195 (637)
T COG4248 166 INANG--------------------------------------------------TLHLCPVGVSEFTPPELQTLPSFVG 195 (637)
T ss_pred eccCC--------------------------------------------------ceEecccCccccCCHHHhccccccc
Confidence 11111 1122457999999999865 2
Q ss_pred CCCCccchhhhhhHHHHHhhhC-CCCCCCC-------ChHHHHHHHhhc------------cCcccCCCCCCCChhHHHH
Q 012988 310 KGYGMECDWWSLGAIMYEMLVG-YPPFYAD-------DPITTCRKIVHW------------RNHLKFPDDSKLSPEAKDL 369 (452)
Q Consensus 310 ~~~~~~~DiwSlGvil~elltG-~~Pf~~~-------~~~~~~~~i~~~------------~~~~~~p~~~~~s~~~~dL 369 (452)
-.-+...|.|.||+++|++|.| +.||.+- ++.+. .|..+ +....-+.+.-++++++.|
T Consensus 196 ~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~--~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAl 273 (637)
T COG4248 196 FERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLET--DIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQAL 273 (637)
T ss_pred cCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchh--hhhcceeeechhccCCCCCCCCCCChhhcCHHHHHH
Confidence 3346789999999999999986 9999652 22221 22210 0111111224578999999
Q ss_pred HHHhhc---CccccCC
Q 012988 370 ICRLLC---DVEHRLG 382 (452)
Q Consensus 370 i~~mL~---dp~~R~~ 382 (452)
..++.. ++.-||+
T Consensus 274 F~qaF~~~~~~~~RP~ 289 (637)
T COG4248 274 FQQAFTESGVATPRPT 289 (637)
T ss_pred HHHHhcccCCCCCCCC
Confidence 999996 4568885
No 453
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.87 E-value=1.9e-10 Score=116.03 Aligned_cols=245 Identities=20% Similarity=0.187 Sum_probs=161.7
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCc-eeeEEEEEEcCCeEE
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHC-IVKLYYSFQDTEYLY 162 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~-iv~l~~~~~~~~~~~ 162 (452)
....|.....+++|+++++++.+...+...+ .+.+... ....-++++|.+++||| .+..++.++.+.+..
T Consensus 240 k~kws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~--------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~ 310 (829)
T KOG0576|consen 240 KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT--------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLW 310 (829)
T ss_pred CccchHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc--------hhhHHHHHHHHHccCCCCcccccccCCcccccc
Confidence 3455777788999999999988776655544 6655332 34556889999999999 777777778888999
Q ss_pred EEEeecCCC-ChHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEeeccCCccCCCCc
Q 012988 163 LIMEYLPGG-DMMTLL-MREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCST 240 (452)
Q Consensus 163 lV~E~~~gg-sL~~~l-~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~~ 240 (452)
++|+++.++ +-.... ...-.+.+-+.....+.-+.+|++||+.-=+||| |||..+ +..+..||+....+....
T Consensus 311 i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~ 385 (829)
T KOG0576|consen 311 IPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM 385 (829)
T ss_pred hhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccc-cccccccccCCcccCccc
Confidence 999999877 222111 1122344445555677777899999998778999 887655 678999999877664210
Q ss_pred chhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCCCCCccchhhh
Q 012988 241 LYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWS 320 (452)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~~DiwS 320 (452)
...+..+|+.++|||+.....+....|.|+
T Consensus 386 --------------------------------------------------~~~t~~~~~~~~~pev~~~~~~~~~p~~~~ 415 (829)
T KOG0576|consen 386 --------------------------------------------------KPRTAIGTPEPLAPEVIQENTIDGCPDSGS 415 (829)
T ss_pred --------------------------------------------------ccccCCCCCCCCCchhhcccccccCCCccC
Confidence 123567999999999999999999999999
Q ss_pred hhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCC-hhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 321 LGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLS-PEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 321 lGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s-~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
+|+-..++.-|-+|-... ......+-.....+.+......+ ..-.++...++. .|..|+ ....++.|.+|++
T Consensus 416 ~~~~~~~~ap~~pPr~~P--~~~~~~~g~~p~s~~L~~~~aw~~~~~~~~~~~~~~g~P~~pk---v~mgacfsKvfng 489 (829)
T KOG0576|consen 416 LAVSAIQMAPGLPPRSSP--PAVLPMIGNGPNSPMLTDKSAWSPVFHRDFPAPCLNGLPPTPK---VHMGACFSKVFNG 489 (829)
T ss_pred CCcchhhcCCCCCCCCCC--ccccCCCCCCCCccccchhhhcCcccccCCcccccCCCCCCCc---chhhHHHHHHhcc
Confidence 999888888777775331 11111110000000000000000 111135566666 666666 6677777777775
No 454
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.84 E-value=1.8e-08 Score=92.65 Aligned_cols=137 Identities=18% Similarity=0.207 Sum_probs=100.3
Q ss_pred eEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhc-----------------c--cchHHHHHHHHHHHHHhCCC--c
Q 012988 89 ELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMV-----------------K--RGQVEHVRAERNLLAEVASH--C 147 (452)
Q Consensus 89 ~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~-----------------~--~~~~~~~~~E~~il~~l~hp--~ 147 (452)
.+...||-|-=|.||.|... .|.++|||.-.-.... . .-.....++|..+|..|... .
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred hhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 35679999999999999864 6899999964321100 0 01123467889999999755 6
Q ss_pred eeeEEEEEEcCCeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEE
Q 012988 148 IVKLYYSFQDTEYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKL 227 (452)
Q Consensus 148 iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl 227 (452)
+++.+++ +.-.+||||+.|-.|...- ++...+..++..|+.-+.-+-..||||+|+.+=|||+++||.+.+
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r-----~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~~~v 243 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR-----LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGDIVV 243 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc-----CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCCEEE
Confidence 7766554 3457999999887765432 234445556666666666666899999999999999999999999
Q ss_pred eeccCCcc
Q 012988 228 SDFGLCKP 235 (452)
Q Consensus 228 ~DFGla~~ 235 (452)
+||--+..
T Consensus 244 IDwPQ~v~ 251 (304)
T COG0478 244 IDWPQAVP 251 (304)
T ss_pred EeCccccc
Confidence 99987654
No 455
>PRK09902 hypothetical protein; Provisional
Probab=98.76 E-value=1.8e-07 Score=84.10 Aligned_cols=140 Identities=13% Similarity=0.172 Sum_probs=100.7
Q ss_pred ccCCCeEEEEEEEccCCCEEEEEEeecc---hhcccchHHHHHHHHHHHHHhCCC--ceeeEEEEEEc----CCeEEEEE
Q 012988 95 GRGAFGEVRLCREKKSGNIYAMKKLKKS---EMVKRGQVEHVRAERNLLAEVASH--CIVKLYYSFQD----TEYLYLIM 165 (452)
Q Consensus 95 G~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~~~~~E~~il~~l~hp--~iv~l~~~~~~----~~~~~lV~ 165 (452)
|.||.+-|+.... .|+.|-+|.-... ...-..-...+.+|...+..+..- .+++....-.. .-.-+||+
T Consensus 27 ~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 6789999997654 3557888865311 111022346788999999988533 24455422111 12478999
Q ss_pred eecCC-CChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCc--EEEeeccCCccC
Q 012988 166 EYLPG-GDMMTLLMRE--DTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGH--MKLSDFGLCKPL 236 (452)
Q Consensus 166 E~~~g-gsL~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~--ikl~DFGla~~~ 236 (452)
|-++| -+|.+++... .+.++.....++.+++.++.-||..|+.|+|+-+.|||++.+|. ++++||.-++..
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~ 180 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR 180 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence 98754 5888887553 34577777889999999999999999999999999999997777 999999987753
No 456
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.73 E-value=2.5e-07 Score=83.54 Aligned_cols=141 Identities=20% Similarity=0.318 Sum_probs=91.9
Q ss_pred CCCCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHH------HHHHHHHHHHHhCC---CceeeEEEE
Q 012988 84 CVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVE------HVRAERNLLAEVAS---HCIVKLYYS 154 (452)
Q Consensus 84 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~------~~~~E~~il~~l~h---p~iv~l~~~ 154 (452)
...+|.+++.+-......|.+-. -+|..+.+|.............. ...+++..+..+.. ..+..++.+
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIe--i~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~ 106 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIE--IDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA 106 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEE--ECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence 34789999999888877777654 56889999987543211111111 12233343444422 223332222
Q ss_pred E-----EcCCeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcEEEee
Q 012988 155 F-----QDTEYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSD 229 (452)
Q Consensus 155 ~-----~~~~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~ikl~D 229 (452)
. .-....++||||++|..|.+... +++. +...+..++.-||+.|++|+|..|.|++++.++ ++++|
T Consensus 107 ~ekk~~~~~~~~~ll~EYIeG~~l~d~~~----i~e~----~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~-i~iID 177 (229)
T PF06176_consen 107 AEKKIFRYTSSYVLLMEYIEGVELNDIED----IDED----LAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNG-IRIID 177 (229)
T ss_pred eeeeeccceeEEEEEEEEecCeecccchh----cCHH----HHHHHHHHHHHHHHcCCccCCCCcCcEEEECCc-EEEEE
Confidence 2 22345679999999988876531 3332 345677788999999999999999999999665 99999
Q ss_pred ccCCcc
Q 012988 230 FGLCKP 235 (452)
Q Consensus 230 FGla~~ 235 (452)
|+..+.
T Consensus 178 ~~~k~~ 183 (229)
T PF06176_consen 178 TQGKRM 183 (229)
T ss_pred Cccccc
Confidence 997654
No 457
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.68 E-value=3.5e-07 Score=83.49 Aligned_cols=139 Identities=19% Similarity=0.189 Sum_probs=98.0
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccc---------------------hHHHHHHHHHHHHHhC--CCce
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRG---------------------QVEHVRAERNLLAEVA--SHCI 148 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~---------------------~~~~~~~E~~il~~l~--hp~i 148 (452)
..|..|--+.||+|.. .++..+|+|+++........ .......|...|+++. +-.+
T Consensus 54 g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrv 132 (268)
T COG1718 54 GCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRV 132 (268)
T ss_pred eeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 3677788889999875 56899999998653221111 1123567777787774 4455
Q ss_pred eeEEEEEEcCCeEEEEEeecCCCCh-HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCCCcEEECCCCcEE
Q 012988 149 VKLYYSFQDTEYLYLIMEYLPGGDM-MTLLMREDTLTENVARFYIAQSVLAIESIHK-HNYIHRDIKPDNLLLDKNGHMK 226 (452)
Q Consensus 149 v~l~~~~~~~~~~~lV~E~~~ggsL-~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~-~givHrDlkp~NILl~~~g~ik 226 (452)
++.+.+.. -.|||||+....+ .-.| +.-.+...++..+..+++..+.-|-. .|+||+||..=|||+. +|.+.
T Consensus 133 P~Pi~~~~----nVLvMEfIg~~g~pAP~L-kDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~p~ 206 (268)
T COG1718 133 PEPIAFRN----NVLVMEFIGDDGLPAPRL-KDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGEPY 206 (268)
T ss_pred CCceeecC----CeEEEEeccCCCCCCCCc-ccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CCeEE
Confidence 66665543 3699999954311 1112 22234444788888999999988877 8999999999999999 88999
Q ss_pred EeeccCCccCC
Q 012988 227 LSDFGLCKPLD 237 (452)
Q Consensus 227 l~DFGla~~~~ 237 (452)
|+|||-|....
T Consensus 207 iID~~QaV~~~ 217 (268)
T COG1718 207 IIDVSQAVTID 217 (268)
T ss_pred EEECccccccC
Confidence 99999987654
No 458
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.66 E-value=1.9e-07 Score=95.68 Aligned_cols=144 Identities=17% Similarity=0.225 Sum_probs=91.8
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhc--------------------cc-----------chHH------HHH
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMV--------------------KR-----------GQVE------HVR 134 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~--------------------~~-----------~~~~------~~~ 134 (452)
..|+.++-|.||.|+.+. |+.||||+....-.. .. ...+ ++.
T Consensus 131 ~PiAsASIaQVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 578999999999999754 999999998542100 00 0011 233
Q ss_pred HHHHHHHHhC-----CCceeeEEEEEEcCCeEEEEEeecCCCChHHHH--HhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Q 012988 135 AERNLLAEVA-----SHCIVKLYYSFQDTEYLYLIMEYLPGGDMMTLL--MREDTLTENVARFYIAQSVLAIESIHKHNY 207 (452)
Q Consensus 135 ~E~~il~~l~-----hp~iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l--~~~~~~~~~~~~~~~~ql~~aL~~LH~~gi 207 (452)
+|...+.++. .+.+.-.--+++-.+.-.|+|||++|-.+.+.. .. ..++...+.....++. +.-+-..|+
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~~~~~f--~~q~~~dgf 286 (517)
T COG0661 210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKELAELLVRAF--LRQLLRDGF 286 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCHHHHHHHHHHHH--HHHHHhcCc
Confidence 4444444442 344333333344445567999999998888774 33 3444222222111111 222334899
Q ss_pred eecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 208 IHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 208 vHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
+|.|.+|.||+++.+|.+.+.|||+...++..
T Consensus 287 fHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~ 318 (517)
T COG0661 287 FHADPHPGNILVRSDGRIVLLDFGIVGRLDPK 318 (517)
T ss_pred cccCCCccceEEecCCcEEEEcCcceecCCHH
Confidence 99999999999999999999999998877543
No 459
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.64 E-value=7.1e-07 Score=82.54 Aligned_cols=135 Identities=21% Similarity=0.150 Sum_probs=85.7
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCC--ceeeEEEEEEcCCeEEEEEeecC
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASH--CIVKLYYSFQDTEYLYLIMEYLP 169 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp--~iv~l~~~~~~~~~~~lV~E~~~ 169 (452)
..||+|..+.||+. .|..+++|...... ....+.+|.++++.+..- .+.+.+.+..+.+...+|||+++
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~-----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~ 77 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF-----DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIV 77 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCC-----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecC
Confidence 46899999999973 25568889875422 234578899999998644 35777888888888899999998
Q ss_pred CCC-hHHH--------------H-------Hhc--CCCCH-HHHHHHHH----------HHHH-HHHHHHH----CCeee
Q 012988 170 GGD-MMTL--------------L-------MRE--DTLTE-NVARFYIA----------QSVL-AIESIHK----HNYIH 209 (452)
Q Consensus 170 ggs-L~~~--------------l-------~~~--~~~~~-~~~~~~~~----------ql~~-aL~~LH~----~givH 209 (452)
|.. +... + +.- ..... .....+.. .+.. ...+|.. ..++|
T Consensus 78 G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~H 157 (226)
T TIGR02172 78 GKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLH 157 (226)
T ss_pred CccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEe
Confidence 863 1111 1 100 00010 00011110 1111 1222321 24789
Q ss_pred cCCCCCcEEECCCCcEEEeeccCCccC
Q 012988 210 RDIKPDNLLLDKNGHMKLSDFGLCKPL 236 (452)
Q Consensus 210 rDlkp~NILl~~~g~ikl~DFGla~~~ 236 (452)
+|+.|.||+++.++ +.|+||+.+...
T Consensus 158 gD~~~~Nii~~~~~-~~iIDwe~a~~G 183 (226)
T TIGR02172 158 GDFQIGNLITSGKG-TYWIDLGDFGYG 183 (226)
T ss_pred cCCCCCcEEEcCCC-cEEEechhcCcC
Confidence 99999999999988 999999988643
No 460
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.57 E-value=2.2e-06 Score=92.71 Aligned_cols=201 Identities=19% Similarity=0.225 Sum_probs=141.4
Q ss_pred HHHHHHHHHHHHhCCCceeeEEEEEEcCCe----EEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 012988 131 EHVRAERNLLAEVASHCIVKLYYSFQDTEY----LYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHN 206 (452)
Q Consensus 131 ~~~~~E~~il~~l~hp~iv~l~~~~~~~~~----~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~g 206 (452)
.....|...+..+.|+|++.++.+-..... ..+..++|..-++...++.-+..+.+.++.+..+++.||.|+|+..
T Consensus 227 ~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~ 306 (1351)
T KOG1035|consen 227 QTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLS 306 (1351)
T ss_pred HHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhc
Confidence 334556667788899999999888654432 3345578999999999988899999999999999999999999996
Q ss_pred eeecCCCCC---cEEECCCCcEEEe--eccCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHH
Q 012988 207 YIHRDIKPD---NLLLDKNGHMKLS--DFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQL 281 (452)
Q Consensus 207 ivHrDlkp~---NILl~~~g~ikl~--DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (452)
..|.-|... +...+..+...++ ||+.++.+....
T Consensus 307 l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~----------------------------------------- 345 (1351)
T KOG1035|consen 307 LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNE----------------------------------------- 345 (1351)
T ss_pred cceeEEecccccccccCccceeecchhhhcccccCCCcc-----------------------------------------
Confidence 555544444 3444555666666 888776553211
Q ss_pred HHhhhhccccccccccCCccccchhccCCCCCcc--chhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCC
Q 012988 282 QHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGME--CDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDD 359 (452)
Q Consensus 282 ~~~~~~~~~~~~~~~Gt~~y~APE~~~~~~~~~~--~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~ 359 (452)
......-+..+.|||......+..+ .|+|.+|.++..+..|..+-..... ...++ +.
T Consensus 346 ---------~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~~~---~~~~l--------~~- 404 (1351)
T KOG1035|consen 346 ---------KSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKSAV---PVSLL--------DV- 404 (1351)
T ss_pred ---------cchhhcCccccccccccccccchhhhhhHHHHHHHHHhhhhhcCcccccccc---hhhhh--------cc-
Confidence 0112234556888888876665544 6999999999999988655322111 11111 00
Q ss_pred CCCChhHHHHHHHhhc-CccccCCCCCHHHHhcCCCcCC
Q 012988 360 SKLSPEAKDLICRLLC-DVEHRLGTGGAHQIKAHPWFKD 397 (452)
Q Consensus 360 ~~~s~~~~dLi~~mL~-dp~~R~~~~~~~eil~hp~f~~ 397 (452)
.......+++.+|+. ++++|+ ++.+++.|||.+-
T Consensus 405 -~~~~~~~d~~~~~~~~~~~~Rl---~~~~ll~~~f~~~ 439 (1351)
T KOG1035|consen 405 -LSTSELLDALPKCLDEDSEERL---SALELLTHPFLRF 439 (1351)
T ss_pred -ccchhhhhhhhhhcchhhhhcc---chhhhhhchhccc
Confidence 111267888899997 999999 8999999999974
No 461
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.51 E-value=2e-06 Score=79.53 Aligned_cols=138 Identities=21% Similarity=0.343 Sum_probs=83.2
Q ss_pred eceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCC--ceeeEEEEEE---cCCeEEEEE
Q 012988 91 LTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASH--CIVKLYYSFQ---DTEYLYLIM 165 (452)
Q Consensus 91 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp--~iv~l~~~~~---~~~~~~lV~ 165 (452)
++.|+.|..+.||++.... ..+++|+.... .....+..|..+++.+... .+.+++.... .....+++|
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~-----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~ 74 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP-----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLM 74 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSH-----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCC-----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEE
Confidence 5689999999999887654 58999986543 2345677899999888533 3566666442 234579999
Q ss_pred eecCCCChHH----------------HHH---hc----CCCCHHH------HHHH---------------HHHHHH-HHH
Q 012988 166 EYLPGGDMMT----------------LLM---RE----DTLTENV------ARFY---------------IAQSVL-AIE 200 (452)
Q Consensus 166 E~~~ggsL~~----------------~l~---~~----~~~~~~~------~~~~---------------~~ql~~-aL~ 200 (452)
++++|..+.. .+. .. ..+.... .... ...+.. .+.
T Consensus 75 ~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (239)
T PF01636_consen 75 EYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQ 154 (239)
T ss_dssp EEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred EEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHH
Confidence 9999987777 111 11 0111000 0000 111222 233
Q ss_pred HHHH-------CCeeecCCCCCcEEEC-CCCcEEEeeccCCcc
Q 012988 201 SIHK-------HNYIHRDIKPDNLLLD-KNGHMKLSDFGLCKP 235 (452)
Q Consensus 201 ~LH~-------~givHrDlkp~NILl~-~~g~ikl~DFGla~~ 235 (452)
.++. .+++|+|+.|.|||++ +++.+-|+||+.+..
T Consensus 155 ~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 155 ELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred HHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 3332 4699999999999999 667778999998764
No 462
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.44 E-value=4.3e-06 Score=74.71 Aligned_cols=129 Identities=25% Similarity=0.347 Sum_probs=90.8
Q ss_pred CCCeeEeceeccCCC-eEEEEEEEccCCCEEEEEEeecch----------hccc--------chHHHHHHHHHHHHHh--
Q 012988 85 VDDFELLTIIGRGAF-GEVRLCREKKSGNIYAMKKLKKSE----------MVKR--------GQVEHVRAERNLLAEV-- 143 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~-g~V~~a~~~~~~~~vavK~~~~~~----------~~~~--------~~~~~~~~E~~il~~l-- 143 (452)
..+++.++.||.|+- |.||+++. .|..||+|++..-. .... .....+..|-....+|
T Consensus 36 ~~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke 113 (207)
T PF13095_consen 36 GDDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKE 113 (207)
T ss_pred CCcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHh
Confidence 378999999999999 99998865 48899999942210 0000 1223456666655555
Q ss_pred -CCCce--eeEEEEEEcC------------------CeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 012988 144 -ASHCI--VKLYYSFQDT------------------EYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESI 202 (452)
Q Consensus 144 -~hp~i--v~l~~~~~~~------------------~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~L 202 (452)
.+.++ |++++++.-. ....||.||++... .+... -+.+|+.-|..+
T Consensus 114 ~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~~~----~~~~~~~dl~~~ 180 (207)
T PF13095_consen 114 AGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQIR----DIPQMLRDLKIL 180 (207)
T ss_pred ccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccchh----HHHHHHHHHHHH
Confidence 45556 9999997321 12468889886543 22222 356778888899
Q ss_pred HHCCeeecCCCCCcEEECCCCcEEEeeccCC
Q 012988 203 HKHNYIHRDIKPDNLLLDKNGHMKLSDFGLC 233 (452)
Q Consensus 203 H~~givHrDlkp~NILl~~~g~ikl~DFGla 233 (452)
|..||+-+|+++.|.. .-||+|||.+
T Consensus 181 ~k~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 181 HKLGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HHCCeeeccCcccccc-----CCEEEecccC
Confidence 9999999999999997 4589999964
No 463
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.38 E-value=5e-06 Score=77.91 Aligned_cols=134 Identities=14% Similarity=0.081 Sum_probs=83.4
Q ss_pred eccCCC-eEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhC-CCceeeEEEEEEcCCeEEEEEeecCCC
Q 012988 94 IGRGAF-GEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVA-SHCIVKLYYSFQDTEYLYLIMEYLPGG 171 (452)
Q Consensus 94 LG~G~~-g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~~~~~~~lV~E~~~gg 171 (452)
|-.|.+ +.||++.. .+..+.+|+..... ...+.+|+.+++.+. +--+++++++....+..++|||+++|.
T Consensus 6 ~~~g~~~~~v~~~~~--~~~~~~vk~~~~~~------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~ 77 (244)
T cd05150 6 VTEGQSGATVYRLDG--KNPGLYLKIAPSGP------TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGV 77 (244)
T ss_pred cCCCCCcCeEEEEcC--CCCcEEEEecCCCc------ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCc
Confidence 444555 78998754 34678888765432 234667999988884 345667888887777789999999987
Q ss_pred ChHHHH-------------------HhcC----CCCHH------HHHHHHH----------------HHHHHHHHH----
Q 012988 172 DMMTLL-------------------MRED----TLTEN------VARFYIA----------------QSVLAIESI---- 202 (452)
Q Consensus 172 sL~~~l-------------------~~~~----~~~~~------~~~~~~~----------------ql~~aL~~L---- 202 (452)
+|.... +.-. .+... .....+. .+...+..|
T Consensus 78 ~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 157 (244)
T cd05150 78 PAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATR 157 (244)
T ss_pred cHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhC
Confidence 766431 0000 11100 0000000 011112222
Q ss_pred ---HHCCeeecCCCCCcEEECCCCcEEEeeccCCcc
Q 012988 203 ---HKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKP 235 (452)
Q Consensus 203 ---H~~givHrDlkp~NILl~~~g~ikl~DFGla~~ 235 (452)
....++|+|+.|.|||++.++.+.|+||+.+..
T Consensus 158 ~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~ 193 (244)
T cd05150 158 PAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV 193 (244)
T ss_pred CCcCceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence 123489999999999999988789999998864
No 464
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.28 E-value=6e-06 Score=84.48 Aligned_cols=140 Identities=20% Similarity=0.275 Sum_probs=86.3
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhcc----------------------------cchHHH------HHHHH
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVK----------------------------RGQVEH------VRAER 137 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~----------------------------~~~~~~------~~~E~ 137 (452)
+.||.-+.|.||+|+.+. |+.||||+-+..-... .+..+. +.+|+
T Consensus 167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred chhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 478999999999999766 9999999875421000 000111 22232
Q ss_pred HH----HHHhCCCc------eeeEEEEEEcCCeEEEEEeecCCCChHHHH--HhcCCCCHHHHHHHHHHHHHHHHHHHHC
Q 012988 138 NL----LAEVASHC------IVKLYYSFQDTEYLYLIMEYLPGGDMMTLL--MREDTLTENVARFYIAQSVLAIESIHKH 205 (452)
Q Consensus 138 ~i----l~~l~hp~------iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l--~~~~~~~~~~~~~~~~ql~~aL~~LH~~ 205 (452)
+. .+.+.|-+ |+++|-.+ ...-.|+||||+|..+.++- .+ ..++...+...+.+.. ++-|=..
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~--st~RVLtME~~~G~~i~Dl~~i~~-~gi~~~~i~~~l~~~~--~~qIf~~ 320 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWDL--STKRVLTMEYVDGIKINDLDAIDK-RGISPHDILNKLVEAY--LEQIFKT 320 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhhc--CcceEEEEEecCCccCCCHHHHHH-cCCCHHHHHHHHHHHH--HHHHHhc
Confidence 22 22333444 44443333 23467999999998766553 33 3344443332222221 1222347
Q ss_pred CeeecCCCCCcEEECC----CCcEEEeeccCCccCC
Q 012988 206 NYIHRDIKPDNLLLDK----NGHMKLSDFGLCKPLD 237 (452)
Q Consensus 206 givHrDlkp~NILl~~----~g~ikl~DFGla~~~~ 237 (452)
|++|.|=+|.||+++. ++.+.+.|||+...+.
T Consensus 321 GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is 356 (538)
T KOG1235|consen 321 GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS 356 (538)
T ss_pred CCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence 8999999999999994 5689999999988765
No 465
>PLN02876 acyl-CoA dehydrogenase
Probab=98.27 E-value=1.5e-05 Score=87.75 Aligned_cols=146 Identities=21% Similarity=0.340 Sum_probs=91.7
Q ss_pred EeceeccCCCeEEEEEEEccCC--CEEEEEEeecchhcccchHHHHHHHHHHHHHhC-CCc--eeeEEEEEEcC---CeE
Q 012988 90 LLTIIGRGAFGEVRLCREKKSG--NIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVA-SHC--IVKLYYSFQDT---EYL 161 (452)
Q Consensus 90 i~~~LG~G~~g~V~~a~~~~~~--~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~--iv~l~~~~~~~---~~~ 161 (452)
-+..|+.|.++.+|+......+ ..+++|+........ ....+.+|..+|+.+. |++ +++++.++.+. +..
T Consensus 42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~--~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~ 119 (822)
T PLN02876 42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQ--SAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTA 119 (822)
T ss_pred eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCc--cHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCc
Confidence 3677899999999998764332 467888764432211 2345788999999995 665 47778777664 467
Q ss_pred EEEEeecCCCChHH--------------------HH---HhcC----CC---------CHHHHHHHHHH-----------
Q 012988 162 YLIMEYLPGGDMMT--------------------LL---MRED----TL---------TENVARFYIAQ----------- 194 (452)
Q Consensus 162 ~lV~E~~~ggsL~~--------------------~l---~~~~----~~---------~~~~~~~~~~q----------- 194 (452)
|+||||++|..+.+ .| +.-. .+ ...++..+..+
T Consensus 120 flVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~ 199 (822)
T PLN02876 120 FYIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPP 199 (822)
T ss_pred eEEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCC
Confidence 89999998764321 11 1100 00 01122221111
Q ss_pred ----HHHHHHHHHH-----------CCeeecCCCCCcEEECCC-Cc-EEEeeccCCccCC
Q 012988 195 ----SVLAIESIHK-----------HNYIHRDIKPDNLLLDKN-GH-MKLSDFGLCKPLD 237 (452)
Q Consensus 195 ----l~~aL~~LH~-----------~givHrDlkp~NILl~~~-g~-ikl~DFGla~~~~ 237 (452)
+...+.+|.. ..+||+|+++.|||++.+ +. +-|.||+++...+
T Consensus 200 ~~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~Gd 259 (822)
T PLN02876 200 RNPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLGN 259 (822)
T ss_pred CChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccCC
Confidence 2233566632 249999999999999853 33 5799999987654
No 466
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.25 E-value=9.3e-06 Score=70.37 Aligned_cols=129 Identities=16% Similarity=0.246 Sum_probs=90.4
Q ss_pred eEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCcee-eEEEEEEcCCeEEEEEee
Q 012988 89 ELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIV-KLYYSFQDTEYLYLIMEY 167 (452)
Q Consensus 89 ~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv-~l~~~~~~~~~~~lV~E~ 167 (452)
+..+.||+|++|.||++.+. |..+|+|+-..+ .....+..|+++|..+...++. ++|.+-. .++.|||
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~d-----s~r~~l~kEakiLeil~g~~~~p~vy~yg~----~~i~me~ 93 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEWR--GGEVALKVRRRD-----SPRRNLEKEAKILEILAGEGVTPEVYFYGE----DFIRMEY 93 (201)
T ss_pred hhhhhhhcccccEEEEeecc--CceEEEEEecCC-----cchhhHHHHHHHHHHhhhcCCCceEEEech----hhhhhhh
Confidence 34678999999999999765 779999976543 2345688899999999877654 4444433 2456999
Q ss_pred cCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCC-CCcEEECCCCcEEEeeccCCcc
Q 012988 168 LPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIK-PDNLLLDKNGHMKLSDFGLCKP 235 (452)
Q Consensus 168 ~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlk-p~NILl~~~g~ikl~DFGla~~ 235 (452)
+.|-.|...-... + +.-+..++.+---|-..||-|..|. |..++|-.++.+.|+||.-|..
T Consensus 94 i~G~~L~~~~~~~---~----rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 94 IDGRPLGKLEIGG---D----RKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred hcCcchhhhhhcc---c----HHHHHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 9988887764321 2 2223344444334566799999886 5556666666999999998874
No 467
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.18 E-value=7e-05 Score=67.46 Aligned_cols=134 Identities=18% Similarity=0.231 Sum_probs=94.0
Q ss_pred ceeccCCCeEEEEEEEccCCCEEEEEEeecchhc-------------ccchHHHHHHHHHHHHHhC------CCceeeEE
Q 012988 92 TIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMV-------------KRGQVEHVRAERNLLAEVA------SHCIVKLY 152 (452)
Q Consensus 92 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~~~E~~il~~l~------hp~iv~l~ 152 (452)
..||+|+.=.||. + ......+||++...... .........+|+.-...+. +.+|.+++
T Consensus 7 ~~i~~G~~R~cy~--H-P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 7 DLIAQGGERDCYQ--H-PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred cccccCCCceEEE--C-CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 4789999999993 3 44566889998766400 1112345566766665555 77899999
Q ss_pred EEEEcCCeEEEEEeecCC------CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCC---
Q 012988 153 YSFQDTEYLYLIMEYLPG------GDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNG--- 223 (452)
Q Consensus 153 ~~~~~~~~~~lV~E~~~g------gsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g--- 223 (452)
|+.+++.-.-+|+|.+.. -+|.+++. .+.+++ ..+. .+-.-..||-+++|+.+||+|.||++...+
T Consensus 84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~-~~~~~~-~~~~---~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~ 158 (199)
T PF10707_consen 84 GFVETNLGLGLVVELIRDADGNISPTLEDYLK-EGGLTE-ELRQ---ALDEFKRYLLDHHIVIRDLNPHNIVVQRRDSGE 158 (199)
T ss_pred EEEecCCceEEEEEEEECCCCCcCccHHHHHH-cCCccH-HHHH---HHHHHHHHHHHcCCeecCCCcccEEEEecCCCc
Confidence 999999999999998732 36777773 445665 3333 333445678899999999999999996432
Q ss_pred -cEEEee-ccCC
Q 012988 224 -HMKLSD-FGLC 233 (452)
Q Consensus 224 -~ikl~D-FGla 233 (452)
.+.|+| ||..
T Consensus 159 ~~lvlIDG~G~~ 170 (199)
T PF10707_consen 159 FRLVLIDGLGEK 170 (199)
T ss_pred eEEEEEeCCCCc
Confidence 578887 4543
No 468
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.12 E-value=1.8e-05 Score=73.69 Aligned_cols=74 Identities=15% Similarity=0.216 Sum_probs=46.5
Q ss_pred eceeccCCCe-EEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCC---ceeeEEEEEEcC---CeEEE
Q 012988 91 LTIIGRGAFG-EVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASH---CIVKLYYSFQDT---EYLYL 163 (452)
Q Consensus 91 ~~~LG~G~~g-~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp---~iv~l~~~~~~~---~~~~l 163 (452)
+..|+.|+.. .||+. +..+++|..... .....+.+|..++..+... .+.+.++..... ...++
T Consensus 2 ~~~~~~gG~~n~vy~~-----~~~~VlR~~~~~-----~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~ 71 (235)
T cd05155 2 IEPVDSGGTDNATFRL-----GDDMSVRLPSAA-----GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWS 71 (235)
T ss_pred ceeccCCCcccceEEc-----CCceEEEcCCcc-----chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceE
Confidence 3467777766 59965 235777864432 1234688899999888532 345555443332 24588
Q ss_pred EEeecCCCChH
Q 012988 164 IMEYLPGGDMM 174 (452)
Q Consensus 164 V~E~~~ggsL~ 174 (452)
||++++|.++.
T Consensus 72 l~~~i~G~~l~ 82 (235)
T cd05155 72 VYRWLEGETAT 82 (235)
T ss_pred EEEeecCCCCC
Confidence 99999986653
No 469
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=98.03 E-value=8.6e-05 Score=69.03 Aligned_cols=137 Identities=16% Similarity=0.211 Sum_probs=80.9
Q ss_pred eceeccCCCeEEEEEEEcc-CCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCc-eeeEEEEEEcCCeEEEEEeec
Q 012988 91 LTIIGRGAFGEVRLCREKK-SGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHC-IVKLYYSFQDTEYLYLIMEYL 168 (452)
Q Consensus 91 ~~~LG~G~~g~V~~a~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~-iv~l~~~~~~~~~~~lV~E~~ 168 (452)
++.|..|-...||++.... .+..|++|+...... ......+|..+++.+...+ .+++++.+. . .+||||+
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~----~~~d~~~E~~~~~~l~~~gl~P~v~~~~~-~---~~l~e~i 74 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTE----LIIDRERELRIHKLLSKHGLAPKLYATFQ-N---GLIYEFI 74 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCcc----ceecHHHHHHHHHHHHhCCCCCeEEEEeC-C---cEEEEee
Confidence 4578888899999886433 357899997653311 1122346888998885433 445554443 2 3799999
Q ss_pred CCCChHHH--------------HH---hc-CCC----------C-HHHHHHHHHH----------------------HH-
Q 012988 169 PGGDMMTL--------------LM---RE-DTL----------T-ENVARFYIAQ----------------------SV- 196 (452)
Q Consensus 169 ~ggsL~~~--------------l~---~~-~~~----------~-~~~~~~~~~q----------------------l~- 196 (452)
+|.++... +. .. ... . ...+..+... +.
T Consensus 75 ~G~~l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 154 (235)
T cd05157 75 PGRTLEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRD 154 (235)
T ss_pred CCCcCCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHH
Confidence 88654211 11 10 011 0 1121122111 11
Q ss_pred --HHHH-HHH----HCCeeecCCCCCcEEECC-CCcEEEeeccCCcc
Q 012988 197 --LAIE-SIH----KHNYIHRDIKPDNLLLDK-NGHMKLSDFGLCKP 235 (452)
Q Consensus 197 --~aL~-~LH----~~givHrDlkp~NILl~~-~g~ikl~DFGla~~ 235 (452)
..|. .+- ..+++|+|+.+.|||++. ++.+.|+||..|..
T Consensus 155 ~~~~l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~ 201 (235)
T cd05157 155 EISWLKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGY 201 (235)
T ss_pred HHHHHHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence 1111 111 136999999999999998 57899999998874
No 470
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.95 E-value=0.00033 Score=69.89 Aligned_cols=80 Identities=23% Similarity=0.225 Sum_probs=54.5
Q ss_pred eceeccCCCeEEEEEEEccCCCEEEEEEeecchhc--c--cchHHHHHHHHHHHHHhC---CCceeeEEEEEEcCCeEEE
Q 012988 91 LTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMV--K--RGQVEHVRAERNLLAEVA---SHCIVKLYYSFQDTEYLYL 163 (452)
Q Consensus 91 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~--~--~~~~~~~~~E~~il~~l~---hp~iv~l~~~~~~~~~~~l 163 (452)
.+.||.|.+..||++.....++.++||.-...... . .-..++...|.+.|+.+. ..++++++.+ +.+..++
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~l 108 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVT 108 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEE
Confidence 56899999999999987543358999974321100 0 123456777888888763 3467777766 4455789
Q ss_pred EEeecCCCC
Q 012988 164 IMEYLPGGD 172 (452)
Q Consensus 164 V~E~~~ggs 172 (452)
||||+++..
T Consensus 109 VME~L~~~~ 117 (401)
T PRK09550 109 VMEDLSDHK 117 (401)
T ss_pred EEecCCCcc
Confidence 999997643
No 471
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.94 E-value=5e-06 Score=91.89 Aligned_cols=254 Identities=14% Similarity=0.064 Sum_probs=156.9
Q ss_pred CCCeeEeceeccCCCeEEEEEEEccC-CCEEEEEEeecchhcc--cchHHHHHHHHHHHHHhCCCceeeEEEEEEcC--C
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKKS-GNIYAMKKLKKSEMVK--RGQVEHVRAERNLLAEVASHCIVKLYYSFQDT--E 159 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~~-~~~vavK~~~~~~~~~--~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~--~ 159 (452)
..+|++.=-+|-|.+++ +.+... -..+.+|+.+...... +-..+....|++-++...|+++...+.-.... .
T Consensus 1228 ~e~~EV~l~i~~~~~~R---~k~Lr~kid~Fk~~I~ke~d~e~LsePlkemll~e~de~~~~~h~~~~~~p~rI~ps~s~ 1304 (2724)
T KOG1826|consen 1228 MEHSEVNLGISNHFHFR---NKWLRSKIDWFKFSIYKEYDFENLSEPLKEMLLSERDELREAKHYLTEVDPLRIPPSEST 1304 (2724)
T ss_pred hhhhheeeecccceeec---cchHhhhhceeEEEeehhhhHHHHhhHHHHhhhhhhhhhhhhhceeeecccccCCCCCCh
Confidence 45566655555555443 222221 1235666654332211 11223445566667778899988766555433 3
Q ss_pred eEEEEEeecCCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC-----CeeecCCCCCcEEECCCCcEEEeec
Q 012988 160 YLYLIMEYLPGGDMMTLLMRE----DTLTENVARFYIAQSVLAIESIHKH-----NYIHRDIKPDNLLLDKNGHMKLSDF 230 (452)
Q Consensus 160 ~~~lV~E~~~ggsL~~~l~~~----~~~~~~~~~~~~~ql~~aL~~LH~~-----givHrDlkp~NILl~~~g~ikl~DF 230 (452)
..+.+++|+.+|.+.+.+.++ ..+.+..+-....+.+.+..-+|+. -.+|++||+-|.+|..+..+|+.++
T Consensus 1305 ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~ 1384 (2724)
T KOG1826|consen 1305 EEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGKG 1384 (2724)
T ss_pred HHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecCCccccccc
Confidence 468999999999999998654 2344444443344447777777754 2789999999999999999999999
Q ss_pred cCCccCCCCcchhhccccccCccccCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhhccccccccccCCccccchhccCC
Q 012988 231 GLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKK 310 (452)
Q Consensus 231 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~APE~~~~~ 310 (452)
|+.+...+. .......++++.|++|++...-
T Consensus 1385 gLdKIknp~-------------------------------------------------~sf~Gl~l~sp~~v~qli~N~i 1415 (2724)
T KOG1826|consen 1385 GLDKIKNPV-------------------------------------------------LSFFGLELCSPIYVLQLIKNEI 1415 (2724)
T ss_pred ccccccCch-------------------------------------------------HhhhhhhhCCHHHHHHHHHHHH
Confidence 999832211 0112245788899999999988
Q ss_pred CCCccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCCCCCCChhHHHHHHHhhc-CccccCCCCCHHHH
Q 012988 311 GYGMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPDDSKLSPEAKDLICRLLC-DVEHRLGTGGAHQI 389 (452)
Q Consensus 311 ~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dLi~~mL~-dp~~R~~~~~~~ei 389 (452)
.++.++|+|+.|+.+|++-.|..+|-.-.... ...+.........+. -.|.++-.....+|- .-..|| +-..+
T Consensus 1416 k~t~rsdilr~s~~ly~rs~~n~~fi~flq~~-Lkgiidn~tf~sIe~--l~pgdaNve~~~~Ll~K~~~rp---~q~is 1489 (2724)
T KOG1826|consen 1416 KFTKRSDILRRSLSLYLRSDGNAYFIFFLQPA-LKGIIDNHTFFSIEK--LKPGDANVEALHRLLWKYMERP---GQYIS 1489 (2724)
T ss_pred hhhhHHHHHHHHHHHHHHhcccHHHHHHHHHH-HcCcccccccccccc--cCCCcccHHHHHHHHHHhhhcc---hhhhh
Confidence 99999999999999999999988873211111 111111111112221 223444444444554 567788 55666
Q ss_pred hcCCCcC
Q 012988 390 KAHPWFK 396 (452)
Q Consensus 390 l~hp~f~ 396 (452)
+.-+.|-
T Consensus 1490 ls~d~~a 1496 (2724)
T KOG1826|consen 1490 LSRDHFA 1496 (2724)
T ss_pred ccccccc
Confidence 6666554
No 472
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.87 E-value=9.1e-05 Score=71.47 Aligned_cols=138 Identities=16% Similarity=0.139 Sum_probs=84.4
Q ss_pred EeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCC--ceeeEEEE------EEcCCeE
Q 012988 90 LLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASH--CIVKLYYS------FQDTEYL 161 (452)
Q Consensus 90 i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp--~iv~l~~~------~~~~~~~ 161 (452)
-++.|..|....+|+... ++..+++|+... .....+..|+.++..+.+. .+++++.. ....+..
T Consensus 18 ~i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~------~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~ 89 (296)
T cd05153 18 SFEGISAGIENTNYFVTT--DSGRYVLTLFEK------VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKP 89 (296)
T ss_pred heecccCccccceEEEEe--CCCcEEEEEcCC------CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCce
Confidence 366788888899998753 345789998753 1234566788888888533 24444432 2334567
Q ss_pred EEEEeecCCCChHH-----------HH---Hhc-CCCC---------HHHH---H--------HHHHHHHHHHHHHHH--
Q 012988 162 YLIMEYLPGGDMMT-----------LL---MRE-DTLT---------ENVA---R--------FYIAQSVLAIESIHK-- 204 (452)
Q Consensus 162 ~lV~E~~~ggsL~~-----------~l---~~~-~~~~---------~~~~---~--------~~~~ql~~aL~~LH~-- 204 (452)
++|+++++|..+.. .+ +.. ..+. .... . .....+..++.++..
T Consensus 90 ~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~ 169 (296)
T cd05153 90 AALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFD 169 (296)
T ss_pred EEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhh
Confidence 89999998866421 01 100 0000 0000 0 011112234444443
Q ss_pred -----CCeeecCCCCCcEEECCCCcEEEeeccCCcc
Q 012988 205 -----HNYIHRDIKPDNLLLDKNGHMKLSDFGLCKP 235 (452)
Q Consensus 205 -----~givHrDlkp~NILl~~~g~ikl~DFGla~~ 235 (452)
.+++|+|+.|.|||++.++.+.|+||+.+..
T Consensus 170 ~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 170 PSDLPRGVIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred hhcCCCcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 4799999999999999987789999998764
No 473
>PRK10593 hypothetical protein; Provisional
Probab=97.86 E-value=0.00032 Score=67.77 Aligned_cols=77 Identities=13% Similarity=0.047 Sum_probs=54.7
Q ss_pred EeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCC---CceeeEEEEEEc---CCeEEE
Q 012988 90 LLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVAS---HCIVKLYYSFQD---TEYLYL 163 (452)
Q Consensus 90 i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h---p~iv~l~~~~~~---~~~~~l 163 (452)
-++.||.|..+.||.... .+..+.+|..+.. .....+..|...|+.+.. ..++++++++.+ .+..++
T Consensus 18 ~~~~i~~G~~~~vy~~~~--~~~~~~~k~~~~~-----~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~L 90 (297)
T PRK10593 18 RVECISEQPYAALWALYD--SQGNPMPLMARSF-----STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVL 90 (297)
T ss_pred eeeecCCccceeEEEEEc--CCCCEEEEEeccc-----ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEE
Confidence 356899999999997643 2335677764321 112467889999998853 368888887754 366899
Q ss_pred EEeecCCCCh
Q 012988 164 IMEYLPGGDM 173 (452)
Q Consensus 164 V~E~~~ggsL 173 (452)
|||+++|+++
T Consensus 91 VmE~i~G~~~ 100 (297)
T PRK10593 91 LLERLRGVSV 100 (297)
T ss_pred EEeccCCEec
Confidence 9999998754
No 474
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.77 E-value=0.00011 Score=65.86 Aligned_cols=99 Identities=20% Similarity=0.221 Sum_probs=78.6
Q ss_pred HHHHHHHHHhCC-CceeeEEEEEEcCCeEEEEEeecCCCChHHH---HHhcCCCCHHHHHHHHHHHHHHHHHHHH---CC
Q 012988 134 RAERNLLAEVAS-HCIVKLYYSFQDTEYLYLIMEYLPGGDMMTL---LMREDTLTENVARFYIAQSVLAIESIHK---HN 206 (452)
Q Consensus 134 ~~E~~il~~l~h-p~iv~l~~~~~~~~~~~lV~E~~~ggsL~~~---l~~~~~~~~~~~~~~~~ql~~aL~~LH~---~g 206 (452)
..|.-+|+.+.+ +++++++|++-+ ++|.||.+.+++... +..-..-+......++.+++..+++|+. ..
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~ 82 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF 82 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 357788888876 699999999843 579999987766421 1111235677888899999999999997 35
Q ss_pred eeecCCCCCcEEECCCCcEEEeeccCCccC
Q 012988 207 YIHRDIKPDNLLLDKNGHMKLSDFGLCKPL 236 (452)
Q Consensus 207 ivHrDlkp~NILl~~~g~ikl~DFGla~~~ 236 (452)
+.-.|++|+|+-++++|++|++|...+...
T Consensus 83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred EEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 888999999999999999999999877643
No 475
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.74 E-value=0.00022 Score=67.27 Aligned_cols=134 Identities=16% Similarity=0.199 Sum_probs=78.4
Q ss_pred eeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCce-eeEEEEEEcCCeEEEEEeecCCC
Q 012988 93 IIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCI-VKLYYSFQDTEYLYLIMEYLPGG 171 (452)
Q Consensus 93 ~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i-v~l~~~~~~~~~~~lV~E~~~gg 171 (452)
.+..|-.+.+|+.. .++..+++|+.......- . ....+|..+++.+....+ .+++.... -++||||++|.
T Consensus 3 ~~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~--~-~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~ 73 (256)
T TIGR02721 3 TLSGGLTNRSWRIE--HPGISFVWRPQSPVCKAL--G-VDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGE 73 (256)
T ss_pred cCCCcCcCCeEEEE--eCCccEEEeeCCcccccc--c-CcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCc
Confidence 35678888999876 457788898754321110 0 124678889998864433 44444432 26899999886
Q ss_pred ChHH--------------HHHh---c----CCCCH-HHHHHHHHHH---------HHHHHHHHH--------CCeeecCC
Q 012988 172 DMMT--------------LLMR---E----DTLTE-NVARFYIAQS---------VLAIESIHK--------HNYIHRDI 212 (452)
Q Consensus 172 sL~~--------------~l~~---~----~~~~~-~~~~~~~~ql---------~~aL~~LH~--------~givHrDl 212 (452)
.+.. .+.+ - .+++. ..+..+..++ ...+..+-. ..++|+|+
T Consensus 74 ~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl 153 (256)
T TIGR02721 74 VITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDV 153 (256)
T ss_pred ccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCC
Confidence 5431 1111 1 11111 1222222121 111222221 25899999
Q ss_pred CCCcEEECCCCcEEEeeccCCccC
Q 012988 213 KPDNLLLDKNGHMKLSDFGLCKPL 236 (452)
Q Consensus 213 kp~NILl~~~g~ikl~DFGla~~~ 236 (452)
.|.|||++.++ +.|+||+.|...
T Consensus 154 ~~~Nil~~~~~-~~lIDwE~a~~g 176 (256)
T TIGR02721 154 HAYNLVVTPQG-LKLIDWEYASDG 176 (256)
T ss_pred CcCcEEEeCCC-CEEEeccccCcC
Confidence 99999999887 789999988753
No 476
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.70 E-value=0.00072 Score=65.64 Aligned_cols=143 Identities=18% Similarity=0.163 Sum_probs=85.3
Q ss_pred CCeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCC--ceeeEEEE------EEc
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASH--CIVKLYYS------FQD 157 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp--~iv~l~~~------~~~ 157 (452)
+....++.++.|....||++.. . +..+++|+..... ....+..|..++..|... .+++++.. ...
T Consensus 22 ~~~~~i~~~~~G~~n~~y~v~t-~-~~~~vLK~~~~~~-----~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~ 94 (307)
T TIGR00938 22 GELLSLKGIAEGVENSNYLLTT-D-VGRYILTLYEKRV-----KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTL 94 (307)
T ss_pred CCceeccccCCccccceEEEEe-C-CCcEEEEEecCCC-----CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhc
Confidence 3455577888888899998763 3 4468889764421 123456677888777432 24444432 123
Q ss_pred CCeEEEEEeecCCCChH-----------HH---HHh-cCCC----------CHH---HHH----------HHHHHHHHHH
Q 012988 158 TEYLYLIMEYLPGGDMM-----------TL---LMR-EDTL----------TEN---VAR----------FYIAQSVLAI 199 (452)
Q Consensus 158 ~~~~~lV~E~~~ggsL~-----------~~---l~~-~~~~----------~~~---~~~----------~~~~ql~~aL 199 (452)
.+..++||+|++|..+. .. ++. ...+ +.. ... .....+...+
T Consensus 95 ~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~ 174 (307)
T TIGR00938 95 AGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKEL 174 (307)
T ss_pred CCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHH
Confidence 45678999999885431 11 111 0001 100 000 0011223345
Q ss_pred HHHHH-------CCeeecCCCCCcEEECCCCcEEEeeccCCcc
Q 012988 200 ESIHK-------HNYIHRDIKPDNLLLDKNGHMKLSDFGLCKP 235 (452)
Q Consensus 200 ~~LH~-------~givHrDlkp~NILl~~~g~ikl~DFGla~~ 235 (452)
+++.. .+++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 175 ~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~ 217 (307)
T TIGR00938 175 DYLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFACT 217 (307)
T ss_pred HHHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeecccccC
Confidence 55542 5899999999999999988778999998763
No 477
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.69 E-value=0.00035 Score=67.61 Aligned_cols=137 Identities=17% Similarity=0.195 Sum_probs=82.7
Q ss_pred eceeccCCCeEEEEEEEcc------CCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCc-eeeEEEEEEcCCeEEE
Q 012988 91 LTIIGRGAFGEVRLCREKK------SGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHC-IVKLYYSFQDTEYLYL 163 (452)
Q Consensus 91 ~~~LG~G~~g~V~~a~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~-iv~l~~~~~~~~~~~l 163 (452)
++.|..|-...||++.... +++.|++|+..... .......+|..++..+.... ..++++++.. .+
T Consensus 3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~----~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~ 74 (302)
T cd05156 3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV----ELLIDRERELVVFARLSERNLGPKLYGIFPN----GR 74 (302)
T ss_pred EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC----cceechHHHHHHHHHHHhCCCCCceEEEeCC----Cc
Confidence 4567778888999887533 25789999865432 11234567888888885433 3455565542 35
Q ss_pred EEeecCCCChHHH--------------H---HhcC-CC--------CH--HHHHH-------------------------
Q 012988 164 IMEYLPGGDMMTL--------------L---MRED-TL--------TE--NVARF------------------------- 190 (452)
Q Consensus 164 V~E~~~ggsL~~~--------------l---~~~~-~~--------~~--~~~~~------------------------- 190 (452)
|+||++|..+... + +... .. +. .....
T Consensus 75 v~e~i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (302)
T cd05156 75 IEEFIPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELS 154 (302)
T ss_pred hhheeCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHH
Confidence 8999988665421 1 1100 00 00 00000
Q ss_pred -HHHHHHHHHHHHHH---------CCeeecCCCCCcEEECCC----CcEEEeeccCCcc
Q 012988 191 -YIAQSVLAIESIHK---------HNYIHRDIKPDNLLLDKN----GHMKLSDFGLCKP 235 (452)
Q Consensus 191 -~~~ql~~aL~~LH~---------~givHrDlkp~NILl~~~----g~ikl~DFGla~~ 235 (452)
....+...+.+|-. .+++|+|+.|.|||++.+ +.+.|+||+.|..
T Consensus 155 ~~~~~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~ 213 (302)
T cd05156 155 LFLEDEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY 213 (302)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence 11122223334432 268999999999999985 8899999999874
No 478
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.57 E-value=0.00085 Score=64.91 Aligned_cols=143 Identities=21% Similarity=0.234 Sum_probs=96.9
Q ss_pred EeceeccCCCeEEEEEEEccCCCEEEEEEeecchhccc-------------------c----hHHHHHHHHHHHHHhCCC
Q 012988 90 LLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKR-------------------G----QVEHVRAERNLLAEVASH 146 (452)
Q Consensus 90 i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~-------------------~----~~~~~~~E~~il~~l~hp 146 (452)
|-..|..|--+.||.|.. .+|..+|||+++.+-+.-. + ..-....|+..|++++..
T Consensus 148 inGCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a 226 (520)
T KOG2270|consen 148 INGCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA 226 (520)
T ss_pred cccccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 556788888899999874 5688899999865322211 0 012345677788888655
Q ss_pred ceeeEEEEEEcCCeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HHCCeeecCCCCCcEEECCCCcE
Q 012988 147 CIVKLYYSFQDTEYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESI-HKHNYIHRDIKPDNLLLDKNGHM 225 (452)
Q Consensus 147 ~iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~L-H~~givHrDlkp~NILl~~~g~i 225 (452)
.|.-.--... ..-.|||+|+.+.....=..+.-.++...++.+-.+++..+.-| |.+++||.||.-=|+|+. +|.+
T Consensus 227 GIP~PePIlL--k~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Lyh-dG~l 303 (520)
T KOG2270|consen 227 GIPCPEPILL--KNHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLYH-DGKL 303 (520)
T ss_pred CCCCCCceee--ecceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheEE-CCEE
Confidence 4432111111 22469999995322222223445677888888888888887776 457999999999999985 6789
Q ss_pred EEeeccCCccC
Q 012988 226 KLSDFGLCKPL 236 (452)
Q Consensus 226 kl~DFGla~~~ 236 (452)
.|+|-+-+...
T Consensus 304 yiIDVSQSVE~ 314 (520)
T KOG2270|consen 304 YIIDVSQSVEH 314 (520)
T ss_pred EEEEccccccC
Confidence 99999977654
No 479
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.55 E-value=6.4e-05 Score=71.28 Aligned_cols=137 Identities=14% Similarity=0.124 Sum_probs=93.8
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhc-----------------ccchH--HHHHHHHHHHHHhCC--
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMV-----------------KRGQV--EHVRAERNLLAEVAS-- 145 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~-----------------~~~~~--~~~~~E~~il~~l~h-- 145 (452)
-+.+...||-|--+.||.+-+ ..|++.++|.-...... .+-.. -...+|...|+.+..
T Consensus 93 v~svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g 171 (465)
T KOG2268|consen 93 VESVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG 171 (465)
T ss_pred hhhhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC
Confidence 356788999999999999875 45888999953221110 01111 224578888888853
Q ss_pred CceeeEEEEEEcCCeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCCCcEEECCCCcE
Q 012988 146 HCIVKLYYSFQDTEYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHM 225 (452)
Q Consensus 146 p~iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NILl~~~g~i 225 (452)
--+++.+++ +.-|+|||++.|-.|...-+- .. +..+...+..-+--|-.+|+||+|..-=||++++++.+
T Consensus 172 fpVPkpiD~----~RH~Vvmelv~g~Pl~~v~~v---~d---~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd~~i 241 (465)
T KOG2268|consen 172 FPVPKPIDH----NRHCVVMELVDGYPLRQVRHV---ED---PPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDDDKI 241 (465)
T ss_pred CCCCCcccc----cceeeHHHhhcccceeeeeec---CC---hHHHHHHHHHHHHHHHHcCceecccchheeEEecCCCE
Confidence 235555443 456899999998887655311 11 22334444455566788999999999999999999999
Q ss_pred EEeeccCCc
Q 012988 226 KLSDFGLCK 234 (452)
Q Consensus 226 kl~DFGla~ 234 (452)
+++||--..
T Consensus 242 ~vIDFPQmv 250 (465)
T KOG2268|consen 242 VVIDFPQMV 250 (465)
T ss_pred EEeechHhh
Confidence 999997654
No 480
>PRK05231 homoserine kinase; Provisional
Probab=97.41 E-value=0.0034 Score=61.25 Aligned_cols=137 Identities=15% Similarity=0.100 Sum_probs=76.8
Q ss_pred eceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCC--ceeeEEE------EEEcCCeEE
Q 012988 91 LTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASH--CIVKLYY------SFQDTEYLY 162 (452)
Q Consensus 91 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp--~iv~l~~------~~~~~~~~~ 162 (452)
++.|+.|....+|+.... +..+++|++... ....+..|..++..|... .+++.+. +....+..+
T Consensus 27 ~~~l~~G~~n~~y~v~t~--~g~~vLK~~~~~------~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~ 98 (319)
T PRK05231 27 LKGIAEGIENSNFFLTTT--QGEYVLTLFERL------TAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPA 98 (319)
T ss_pred cchhccccccceEEEEeC--CCcEEEEEeccC------ChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEE
Confidence 456778888899987643 346889987511 123344566677666422 2334332 123355678
Q ss_pred EEEeecCCCChH-----------HHH---Hh-cCCC--------C--H--HHHHH-----------HHHH-HHHHHHHHH
Q 012988 163 LIMEYLPGGDMM-----------TLL---MR-EDTL--------T--E--NVARF-----------YIAQ-SVLAIESIH 203 (452)
Q Consensus 163 lV~E~~~ggsL~-----------~~l---~~-~~~~--------~--~--~~~~~-----------~~~q-l~~aL~~LH 203 (452)
++++|++|..+. ..+ +. ...+ . . ..... .+.+ +...+..+.
T Consensus 99 ~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 178 (319)
T PRK05231 99 AIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLA 178 (319)
T ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhh
Confidence 999999886431 111 11 0001 0 0 00000 1111 111222332
Q ss_pred -------HCCeeecCCCCCcEEECCCCcEEEeeccCCcc
Q 012988 204 -------KHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKP 235 (452)
Q Consensus 204 -------~~givHrDlkp~NILl~~~g~ikl~DFGla~~ 235 (452)
..|++|+|+.|.|||++.+...-|+||+.+..
T Consensus 179 ~~~~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~ 217 (319)
T PRK05231 179 SAAWPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFACN 217 (319)
T ss_pred ccccccCCcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence 23899999999999998665568999998764
No 481
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.34 E-value=0.0023 Score=62.70 Aligned_cols=83 Identities=17% Similarity=0.111 Sum_probs=51.2
Q ss_pred eeccCCCeEEEEEEEccCCCEEEEEEeecchh----cccchHHHHHHHHHHHHHhC--CC-ceeeEEEEEEcCCeEEEEE
Q 012988 93 IIGRGAFGEVRLCREKKSGNIYAMKKLKKSEM----VKRGQVEHVRAERNLLAEVA--SH-CIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 93 ~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~----~~~~~~~~~~~E~~il~~l~--hp-~iv~l~~~~~~~~~~~lV~ 165 (452)
.||.|....||++.....++-++||.-..-.- .-.-...+...|...|+... -| .++++|.+ +.....+||
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D~e~~~~vM 79 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--DTEMAVTVM 79 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--ccccceehH
Confidence 57999999999999753336799985432111 11223456667888887764 24 45555443 445567999
Q ss_pred eecCCC-ChHHHH
Q 012988 166 EYLPGG-DMMTLL 177 (452)
Q Consensus 166 E~~~gg-sL~~~l 177 (452)
|+++.. .|+..|
T Consensus 80 EdL~~~~ilR~~L 92 (370)
T TIGR01767 80 EDLSHHKIARKGL 92 (370)
T ss_pred hhCccchHHHHHH
Confidence 999543 333444
No 482
>PLN02236 choline kinase
Probab=97.16 E-value=0.0044 Score=61.14 Aligned_cols=139 Identities=12% Similarity=0.148 Sum_probs=82.1
Q ss_pred EeceeccCCCeEEEEEEEcc----CCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCce-eeEEEEEEcCCeEEEE
Q 012988 90 LLTIIGRGAFGEVRLCREKK----SGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCI-VKLYYSFQDTEYLYLI 164 (452)
Q Consensus 90 i~~~LG~G~~g~V~~a~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i-v~l~~~~~~~~~~~lV 164 (452)
-+..|-.|-...+|++.... +++.|++|+..... ...+. ..+|..+++.+...++ .++++.+... .|
T Consensus 40 ~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t---~~~id-R~~E~~~~~~l~~~gl~P~~~~~~~~g----~v 111 (344)
T PLN02236 40 QVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGV---ELFFD-RDDEIRTFECMSRHGQGPRLLGRFPNG----RV 111 (344)
T ss_pred EEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCC---Ceeec-hHHHHHHHHHHHHcCCCCceEEEECCc----eE
Confidence 34456568889999986432 24689999875432 12222 3678999988865443 3556666432 58
Q ss_pred EeecCCCChHHH--------------HH---hcC----C-CC-HHHHHHHHHHH-----------------HHHHHHH--
Q 012988 165 MEYLPGGDMMTL--------------LM---RED----T-LT-ENVARFYIAQS-----------------VLAIESI-- 202 (452)
Q Consensus 165 ~E~~~ggsL~~~--------------l~---~~~----~-~~-~~~~~~~~~ql-----------------~~aL~~L-- 202 (452)
.+|++|.+|... +. .-. . .. ...+..++.++ ...+..|
T Consensus 112 ~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~ 191 (344)
T PLN02236 112 EEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEK 191 (344)
T ss_pred EEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHH
Confidence 999977655311 11 100 0 11 12222332111 1112222
Q ss_pred --H----HCCeeecCCCCCcEEECC-CCcEEEeeccCCccC
Q 012988 203 --H----KHNYIHRDIKPDNLLLDK-NGHMKLSDFGLCKPL 236 (452)
Q Consensus 203 --H----~~givHrDlkp~NILl~~-~g~ikl~DFGla~~~ 236 (452)
. ...++|+|+++.|||++. ++.+.|+||..|...
T Consensus 192 ~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~ 232 (344)
T PLN02236 192 ELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASYN 232 (344)
T ss_pred HhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhcccc
Confidence 1 236899999999999986 478999999998743
No 483
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.14 E-value=0.005 Score=58.77 Aligned_cols=31 Identities=26% Similarity=0.475 Sum_probs=26.2
Q ss_pred CeeecCCCCCcEEECCCCc-EEEeeccCCccC
Q 012988 206 NYIHRDIKPDNLLLDKNGH-MKLSDFGLCKPL 236 (452)
Q Consensus 206 givHrDlkp~NILl~~~g~-ikl~DFGla~~~ 236 (452)
.++|+|++|.|||++.++. .-|+||+.+...
T Consensus 186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iG 217 (276)
T cd05152 186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKVG 217 (276)
T ss_pred eeEeCCCCCCcEEEeCCCCEEEEECcHhcccC
Confidence 4899999999999997565 469999998753
No 484
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=97.12 E-value=0.015 Score=56.31 Aligned_cols=30 Identities=27% Similarity=0.557 Sum_probs=26.3
Q ss_pred CCeeecCCCCCcEEECCCCcEEEeeccCCcc
Q 012988 205 HNYIHRDIKPDNLLLDKNGHMKLSDFGLCKP 235 (452)
Q Consensus 205 ~givHrDlkp~NILl~~~g~ikl~DFGla~~ 235 (452)
.+++|+|+.+.|||++. +.+.|+||+.+..
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~ 216 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCTI 216 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECccccc
Confidence 47999999999999987 6789999997653
No 485
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.05 E-value=0.0062 Score=58.82 Aligned_cols=149 Identities=13% Similarity=0.172 Sum_probs=87.3
Q ss_pred CeeEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCC--ceeeEEEEEEcCC--eEE
Q 012988 87 DFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASH--CIVKLYYSFQDTE--YLY 162 (452)
Q Consensus 87 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp--~iv~l~~~~~~~~--~~~ 162 (452)
...++..+-.|..-.+|..... ++.++++ ... ............+|..+++.+.-- -+...++.+.++. ..|
T Consensus 26 ~~~~v~~~~~G~sn~t~~~~~~--~~~~vlR-~P~-~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf 101 (321)
T COG3173 26 GLLIVEEISGGWSNDTFRLGDT--GQKYVLR-KPP-RGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPF 101 (321)
T ss_pred CCceeeeccCCcccceEEEecC--CceEEEe-cCC-ccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCce
Confidence 3445556655555555654433 7888888 332 122223345667788888887542 3445566665554 679
Q ss_pred EEEeecCCCChHH------------------HHHhc--------------CCCCHHHHHHHHHH--------------HH
Q 012988 163 LIMEYLPGGDMMT------------------LLMRE--------------DTLTENVARFYIAQ--------------SV 196 (452)
Q Consensus 163 lV~E~~~ggsL~~------------------~l~~~--------------~~~~~~~~~~~~~q--------------l~ 196 (452)
.||+|+.|..+.+ .|..- +.+...++..+..+ ..
T Consensus 102 ~v~~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~ 181 (321)
T COG3173 102 YVMEWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLAD 181 (321)
T ss_pred EEEEEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHH
Confidence 9999998832221 11100 00011111111111 12
Q ss_pred HHHHHHHHC--------CeeecCCCCCcEEECCCCcEEEeeccCCccCCCC
Q 012988 197 LAIESIHKH--------NYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCS 239 (452)
Q Consensus 197 ~aL~~LH~~--------givHrDlkp~NILl~~~g~ikl~DFGla~~~~~~ 239 (452)
.-..||+.+ .++|+|+.+.||+++.++-+=+.||+++...++.
T Consensus 182 ~~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGDP~ 232 (321)
T COG3173 182 RLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGDPL 232 (321)
T ss_pred HHHHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccCCcH
Confidence 234555543 4899999999999999999999999999876543
No 486
>PLN02756 S-methyl-5-thioribose kinase
Probab=97.02 E-value=0.0078 Score=60.06 Aligned_cols=77 Identities=17% Similarity=0.168 Sum_probs=51.3
Q ss_pred EeceeccCCCeEEEEEEEccCCCEEEEEEeecchh-ccc---chHHHHHHHHHHHHHhC---CCceeeEEEEEEcCCeEE
Q 012988 90 LLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEM-VKR---GQVEHVRAERNLLAEVA---SHCIVKLYYSFQDTEYLY 162 (452)
Q Consensus 90 i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~-~~~---~~~~~~~~E~~il~~l~---hp~iv~l~~~~~~~~~~~ 162 (452)
..+.||.|....||+... .+..|+||.-..... ... ....+...|...|+.+. ..++++++.+..+ ..+
T Consensus 36 ~~~eiggGn~N~VyrV~~--~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded--~~v 111 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVS--SSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRT--MAL 111 (418)
T ss_pred eEEEcCCCceeeEEEEEc--CCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCC--CCE
Confidence 467899999999999876 345688986542111 010 13445556677777664 2478888887763 457
Q ss_pred EEEeecCC
Q 012988 163 LIMEYLPG 170 (452)
Q Consensus 163 lV~E~~~g 170 (452)
++||++++
T Consensus 112 lvME~L~~ 119 (418)
T PLN02756 112 IGMRYLEP 119 (418)
T ss_pred EEEeecCC
Confidence 88999976
No 487
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=97.00 E-value=0.0054 Score=60.19 Aligned_cols=142 Identities=15% Similarity=0.171 Sum_probs=81.4
Q ss_pred CCeeEeceeccCCCeEEEEEEEccC---CCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCce-eeEEEEEEcCCeE
Q 012988 86 DDFELLTIIGRGAFGEVRLCREKKS---GNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCI-VKLYYSFQDTEYL 161 (452)
Q Consensus 86 ~~y~i~~~LG~G~~g~V~~a~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i-v~l~~~~~~~~~~ 161 (452)
++.++ +.|..|=...+|++..... +..|++|+...... ..-...+|..+++.+...++ +++++++. .+
T Consensus 15 ~~i~i-~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~----~~IdR~~E~~il~~l~~~gl~P~~l~~~~-~G-- 86 (330)
T PLN02421 15 SDFSV-ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTD----YVIDRERELQAIKYLSAAGFGAKLLGVFG-NG-- 86 (330)
T ss_pred CceEE-EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcC----eEechHHHHHHHHHHHhcCCCCceeEEeC-Cc--
Confidence 34444 4455588889998865432 34789998754321 11223568889998865544 45566663 32
Q ss_pred EEEEeecCCCChHH--------------HHH---hcC-C----CC-HHHHHHHHHHH----------------------H
Q 012988 162 YLIMEYLPGGDMMT--------------LLM---RED-T----LT-ENVARFYIAQS----------------------V 196 (452)
Q Consensus 162 ~lV~E~~~ggsL~~--------------~l~---~~~-~----~~-~~~~~~~~~ql----------------------~ 196 (452)
+|.+|++|..|.. .+. ... + .+ ...+..+..++ .
T Consensus 87 -~i~~fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~ 165 (330)
T PLN02421 87 -MIQSFINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELR 165 (330)
T ss_pred -EeehhhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHH
Confidence 5899997765421 111 111 0 11 12222222221 1
Q ss_pred HHHHHH---H-HC----CeeecCCCCCcEEECC-CCcEEEeeccCCccC
Q 012988 197 LAIESI---H-KH----NYIHRDIKPDNLLLDK-NGHMKLSDFGLCKPL 236 (452)
Q Consensus 197 ~aL~~L---H-~~----givHrDlkp~NILl~~-~g~ikl~DFGla~~~ 236 (452)
.-+..+ . .. -++|.|+.+.|||+++ ++.++++||+.|..-
T Consensus 166 ~~~~~l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~n 214 (330)
T PLN02421 166 DEIVELKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYS 214 (330)
T ss_pred HHHHHHHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCCC
Confidence 112222 1 11 2799999999999975 578999999998743
No 488
>PRK12396 5-methylribose kinase; Reviewed
Probab=96.85 E-value=0.0089 Score=59.35 Aligned_cols=85 Identities=19% Similarity=0.172 Sum_probs=54.6
Q ss_pred eceeccCCCeEEEEEEEccCCCEEEEEEeecchh---cccchHHHHHHHHHHHHHhC--CC-ceeeEEEEEEcCCeEEEE
Q 012988 91 LTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEM---VKRGQVEHVRAERNLLAEVA--SH-CIVKLYYSFQDTEYLYLI 164 (452)
Q Consensus 91 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~E~~il~~l~--hp-~iv~l~~~~~~~~~~~lV 164 (452)
++.||.|.-.-||++.+...++-++||.-..--- .-.-...+...|.++|+... -| +++++|.+ +.....+|
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~e~~~~v 111 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DSVMNCCV 111 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--CcHHhhHH
Confidence 6789999999999998743356788885321110 11233567777888888764 34 56666544 45556799
Q ss_pred EeecCCC-ChHHHH
Q 012988 165 MEYLPGG-DMMTLL 177 (452)
Q Consensus 165 ~E~~~gg-sL~~~l 177 (452)
||+++.. .|+..|
T Consensus 112 MEdL~~~~ilR~~L 125 (409)
T PRK12396 112 MEDLSDHTILRTAL 125 (409)
T ss_pred HHhCcccHHHHHHH
Confidence 9998542 344443
No 489
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=96.72 E-value=0.0041 Score=62.75 Aligned_cols=81 Identities=16% Similarity=0.144 Sum_probs=56.7
Q ss_pred ccchhhhhhHHHHHhhhCCCCCCCCChHHHHHHHhhccCcccCCC---------CCCCChhHHHHHHHhhc-CccccCCC
Q 012988 314 MECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLKFPD---------DSKLSPEAKDLICRLLC-DVEHRLGT 383 (452)
Q Consensus 314 ~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~---------~~~~s~~~~dLi~~mL~-dp~~R~~~ 383 (452)
+++||||+|.++.++..|...+......+....+...... .... ...++....++..+|+- .|..|+
T Consensus 110 pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~-d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~-- 186 (725)
T KOG1093|consen 110 PKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTD-DQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRP-- 186 (725)
T ss_pred cchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccC-chhHHHHHHHHHHHHhhhHhHHHHhccCCcccccccc--
Confidence 3999999999999999999888766666655555432110 0000 01244556678888887 889998
Q ss_pred CCHHHHhcCCCcCCC
Q 012988 384 GGAHQIKAHPWFKDV 398 (452)
Q Consensus 384 ~~~~eil~hp~f~~~ 398 (452)
...++.+|+-|..+
T Consensus 187 -l~~~~~k~~i~~ev 200 (725)
T KOG1093|consen 187 -LPMELSKRCSFTEV 200 (725)
T ss_pred -chhHHhcCccHHHH
Confidence 78888888888765
No 490
>PTZ00384 choline kinase; Provisional
Probab=96.52 E-value=0.037 Score=55.35 Aligned_cols=77 Identities=17% Similarity=0.160 Sum_probs=46.2
Q ss_pred EeceeccCCCeEEEEEEEccC-CCE-----EEEEEeecchhcccchHHHHHHHHHHHHHhCCCc-eeeEEEEEEcCCeEE
Q 012988 90 LLTIIGRGAFGEVRLCREKKS-GNI-----YAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHC-IVKLYYSFQDTEYLY 162 (452)
Q Consensus 90 i~~~LG~G~~g~V~~a~~~~~-~~~-----vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~-iv~l~~~~~~~~~~~ 162 (452)
.++.|..|-...+|++..... +.. |.+++... .....-.-.+|..+++.+...+ -.++++.|.. +
T Consensus 54 ~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~----~~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~~----g 125 (383)
T PTZ00384 54 EIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSST----YNSLVIDNDLQYNIAKLLGDNNFGPKIIGRFGD----F 125 (383)
T ss_pred EEEEeCCcccceEEEEEecCCCCCccccceEEEEeccC----CCceEeccHHHHHHHHHHHhCCCCCeEEEecCC----E
Confidence 445666688999999875432 223 33333211 1111122356899999997554 4566666643 5
Q ss_pred EEEeecCCCChH
Q 012988 163 LIMEYLPGGDMM 174 (452)
Q Consensus 163 lV~E~~~ggsL~ 174 (452)
+|.||++|..|.
T Consensus 126 ~l~efIeGr~l~ 137 (383)
T PTZ00384 126 TIQEWVEGNTMG 137 (383)
T ss_pred EEEEEeccccCC
Confidence 999999886653
No 491
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.21 E-value=0.12 Score=49.53 Aligned_cols=75 Identities=19% Similarity=0.207 Sum_probs=47.6
Q ss_pred eEeceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhC---CCceeeEEEEEEcCCeEEEEE
Q 012988 89 ELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVA---SHCIVKLYYSFQDTEYLYLIM 165 (452)
Q Consensus 89 ~i~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~---hp~iv~l~~~~~~~~~~~lV~ 165 (452)
+-.+.||.|....+|... .+++.|.||+-... ....+..|..-|+.|. .-.+++.+.+....+.-||||
T Consensus 20 ~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~~------~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLll 91 (288)
T PF03881_consen 20 TSIEPVSGGDINEAYRLD--TDGGSYFVKVNSES------GRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLL 91 (288)
T ss_dssp -EEEEE--SSSSEEEEEE--TTS-EEEEEEEEGG------GCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEE
T ss_pred eeeEecCCCChhheEEEE--CCCccEEEEecChh------hHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEE
Confidence 346678999999999765 77889999986522 1235677888888883 346888888888777779999
Q ss_pred eecCCC
Q 012988 166 EYLPGG 171 (452)
Q Consensus 166 E~~~gg 171 (452)
||++.+
T Consensus 92 e~l~~~ 97 (288)
T PF03881_consen 92 EFLEMG 97 (288)
T ss_dssp E-----
T ss_pred EeecCC
Confidence 998765
No 492
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=96.12 E-value=0.12 Score=50.27 Aligned_cols=30 Identities=13% Similarity=0.184 Sum_probs=28.0
Q ss_pred CeeecCCCCCcEEECCCCcEEEeeccCCcc
Q 012988 206 NYIHRDIKPDNLLLDKNGHMKLSDFGLCKP 235 (452)
Q Consensus 206 givHrDlkp~NILl~~~g~ikl~DFGla~~ 235 (452)
+++|+|+.+.|||++.++.+.|+||..+..
T Consensus 197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 197 VLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred eeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 799999999999999999999999998774
No 493
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=96.11 E-value=0.02 Score=55.68 Aligned_cols=73 Identities=25% Similarity=0.459 Sum_probs=55.9
Q ss_pred cCCeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCCCcEEECCCCcEEEeeccCCcc
Q 012988 157 DTEYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESIHKH-NYIHRDIKPDNLLLDKNGHMKLSDFGLCKP 235 (452)
Q Consensus 157 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~-givHrDlkp~NILl~~~g~ikl~DFGla~~ 235 (452)
...+.|++|++- |+++... ......++..++.+.+..+.-+... .+-|||+.-.||||+ +|+|.|+||-+++.
T Consensus 297 e~~y~yl~~kdh-gt~is~i----k~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsRl 370 (488)
T COG5072 297 ETLYLYLHFKDH-GTPISII----KADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSRL 370 (488)
T ss_pred CceEEEEEEecC-Cceeeee----ecccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeeec
Confidence 344788889887 6665422 2234556777788877777766654 789999999999999 99999999999994
No 494
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=96.05 E-value=0.032 Score=50.55 Aligned_cols=101 Identities=21% Similarity=0.248 Sum_probs=63.8
Q ss_pred EEEEEEeecchhcccchHHHHHHHHHHHHHhCCCceeeEEEEEEcCCeEEEEEeecCCCChHHHHHhcCCCCHHHHHHHH
Q 012988 113 IYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDMMTLLMREDTLTENVARFYI 192 (452)
Q Consensus 113 ~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~ 192 (452)
...+|++......- ...-+..+..++.++ ..|+++..- +...+-++.|+|-.... .+ . .++
T Consensus 87 ~L~lKKi~slp~~~--~~~~y~nky~v~Arm--hGilrL~ND--n~~~yGvIlE~Cy~~~i---------~~---~-N~i 147 (308)
T PF07387_consen 87 PLFLKKIRSLPCCI--NDALYFNKYRVFARM--HGILRLKND--NNYKYGVILERCYKIKI---------NF---S-NFI 147 (308)
T ss_pred hhhhhhccCCCccc--chhhhhhhhhHHHHh--hheeEeecC--CCceeEEEEeeccCccc---------ch---h-HHH
Confidence 44555554332221 112346677777776 356776522 33457799999943211 11 1 112
Q ss_pred HHHHHHHHHHHH--CCeeecCCCCCcEEECCCCcEEEeeccC
Q 012988 193 AQSVLAIESIHK--HNYIHRDIKPDNLLLDKNGHMKLSDFGL 232 (452)
Q Consensus 193 ~ql~~aL~~LH~--~givHrDlkp~NILl~~~g~ikl~DFGl 232 (452)
.--+.+|.-.|+ .+.+|+|-.|+||+-|+.|.+||.|-+.
T Consensus 148 ~agi~~L~~fH~~~~~~lHGD~np~NiM~D~~G~lKlVDP~~ 189 (308)
T PF07387_consen 148 TAGIKDLMDFHSENQHCLHGDCNPDNIMCDKFGYLKLVDPVC 189 (308)
T ss_pred HHhHHHHHHhhccCCCeecCCCChhheeecCCCCEEecChhh
Confidence 222567788895 3799999999999999999999999885
No 495
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=95.93 E-value=0.043 Score=50.02 Aligned_cols=30 Identities=37% Similarity=0.737 Sum_probs=21.8
Q ss_pred CeeecCCCCCcEEE-CCCCcEEEeeccCCcc
Q 012988 206 NYIHRDIKPDNLLL-DKNGHMKLSDFGLCKP 235 (452)
Q Consensus 206 givHrDlkp~NILl-~~~g~ikl~DFGla~~ 235 (452)
.+.|.||.|.|||+ +.++.++|+||..|..
T Consensus 144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~ 174 (211)
T PF01633_consen 144 VFCHNDLNPGNILINNKDGEVKLIDFEYAGY 174 (211)
T ss_dssp EEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred eEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence 58999999999999 8899999999999874
No 496
>PRK11768 serine/threonine protein kinase; Provisional
Probab=95.90 E-value=0.32 Score=47.59 Aligned_cols=70 Identities=11% Similarity=0.074 Sum_probs=41.8
Q ss_pred CCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCC--ceeeEE---E--EEEcCCeEEEEEeecCC
Q 012988 98 AFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASH--CIVKLY---Y--SFQDTEYLYLIMEYLPG 170 (452)
Q Consensus 98 ~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp--~iv~l~---~--~~~~~~~~~lV~E~~~g 170 (452)
.-..||.... .+|..|++|+..... .....+..|..++..+... .++... + ....++..+.|+++++|
T Consensus 37 ~eN~vy~v~~-~~~~~~vlKv~r~~~----~~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~G 111 (325)
T PRK11768 37 YENRVYQFGD-EDGRRVVAKFYRPER----WSDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRGG 111 (325)
T ss_pred ccceEEEEec-CCCCEEEEEEcCccc----CCHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeeeCC
Confidence 3467898753 456789999875332 2334566788888777421 122211 1 12335678889999987
Q ss_pred CC
Q 012988 171 GD 172 (452)
Q Consensus 171 gs 172 (452)
..
T Consensus 112 ~~ 113 (325)
T PRK11768 112 RA 113 (325)
T ss_pred CC
Confidence 53
No 497
>PRK06148 hypothetical protein; Provisional
Probab=95.67 E-value=0.22 Score=56.24 Aligned_cols=138 Identities=23% Similarity=0.260 Sum_probs=77.1
Q ss_pred eceeccCCCeEEEEEEEccCCCEEEEEEeecchhcccchHHHHHHHHHHHHHhC--CCc--eeeEEE--------EEEc-
Q 012988 91 LTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVA--SHC--IVKLYY--------SFQD- 157 (452)
Q Consensus 91 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~--hp~--iv~l~~--------~~~~- 157 (452)
++.|+ |..-.+|+... .+|..|++|+..... ....+..|..+|..|. .+. +.+.+. ...+
T Consensus 30 ~~~L~-s~~d~nf~v~~-~~g~~yVLKi~~~~~-----~~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~ 102 (1013)
T PRK06148 30 ATPLD-GERDLNFRLTT-DDGADYILKIVNPSE-----PRVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDP 102 (1013)
T ss_pred EeecC-CcCCceEEEEe-CCCCeEEEEEcCCcc-----chhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecC
Confidence 35675 45688898764 457789999987542 1223444566666552 122 223221 1222
Q ss_pred CC--eEEEEEeecCCCChHHH-------H----------Hh----c------CCC--CH---------------HHHHHH
Q 012988 158 TE--YLYLIMEYLPGGDMMTL-------L----------MR----E------DTL--TE---------------NVARFY 191 (452)
Q Consensus 158 ~~--~~~lV~E~~~ggsL~~~-------l----------~~----~------~~~--~~---------------~~~~~~ 191 (452)
++ +.+.+++|++|..+.+. + .. . ..+ .. ...+.+
T Consensus 103 ~G~~~~vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~F~~p~~~r~~~Wdl~~~~~l~~~l~~i~d~~~r~~ 182 (1013)
T PRK06148 103 DGEPRLLRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQGFMHPGALRDLDWDLRHAGRARDRLHFIDDPEDRAL 182 (1013)
T ss_pred CCceEEEEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccchhhhhhhhhcCCHHHHHH
Confidence 22 56789999998766541 0 00 0 000 00 011122
Q ss_pred HHHHHHHHH-----HHH--HCCeeecCCCCCcEEECCCC--cEE-EeeccCCcc
Q 012988 192 IAQSVLAIE-----SIH--KHNYIHRDIKPDNLLLDKNG--HMK-LSDFGLCKP 235 (452)
Q Consensus 192 ~~ql~~aL~-----~LH--~~givHrDlkp~NILl~~~g--~ik-l~DFGla~~ 235 (452)
+.+++..+. .|. ..++||+|+.+.|||++.++ .+. |+|||.+..
T Consensus 183 l~~~~~~~~~~v~p~l~~Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 183 VERFLARFERNVAPRLAALPAQVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred HHHHHHHHHHHHHHHHhcCCcceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 223333222 122 24799999999999999876 565 999998764
No 498
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=95.32 E-value=0.07 Score=52.74 Aligned_cols=61 Identities=23% Similarity=0.380 Sum_probs=44.2
Q ss_pred EEEEEeecCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHH-HHHCCeeecCCCCCcEEECCC
Q 012988 161 LYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIES-IHKHNYIHRDIKPDNLLLDKN 222 (452)
Q Consensus 161 ~~lV~E~~~ggsL~~~l~~~~~~~~~~~~~~~~ql~~aL~~-LH~~givHrDlkp~NILl~~~ 222 (452)
..||-+|+.|-++..++.. ...++...+.++.-.+.||-- |--.+++|.|+.|.||++.-+
T Consensus 320 ~vl~E~~~~Gl~v~~~v~~-~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~ 381 (565)
T KOG1236|consen 320 LVLVETYERGLSVLRFVKW-KSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFN 381 (565)
T ss_pred ceeeeeccccccHHhhhhc-ccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEec
Confidence 4577788989898888743 445666666666666666543 344689999999999998643
No 499
>smart00133 S_TK_X Extension to Ser/Thr-type protein kinases.
Probab=95.17 E-value=0.021 Score=41.08 Aligned_cols=35 Identities=43% Similarity=0.740 Sum_probs=29.3
Q ss_pred CCCCccccc--cCCCCccccCCCCccCCCCCC-CCCCC
Q 012988 396 KDVVWDKLY--EMEAAFKPEINGELDTQNFMK-FDELD 430 (452)
Q Consensus 396 ~~~~~~~l~--~~~~~~~p~~~~~~~~~~~~~-~~~~~ 430 (452)
++|+|+.|. ++.+||+|.+.+..|.++|+. +....
T Consensus 1 ~~idW~~l~~r~~~pP~~P~~~~~~d~s~fd~~~~~~~ 38 (64)
T smart00133 1 RGIDWDKLENKEIEPPFVPKIKSPTDTSNFDDEFTEET 38 (64)
T ss_pred CCCCHHHHHhCCCCCCcccccCCccHHhHcCCcCCCCC
Confidence 478999995 789999999999999999987 44443
No 500
>PTZ00296 choline kinase; Provisional
Probab=95.05 E-value=0.41 Score=48.83 Aligned_cols=80 Identities=18% Similarity=0.135 Sum_probs=50.2
Q ss_pred CCCeeEeceeccCCCeEEEEEEEcc--------CCCEEEEEEeecchhcccchHHHHHHHHHHHHHhCCCcee-eEEEEE
Q 012988 85 VDDFELLTIIGRGAFGEVRLCREKK--------SGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIV-KLYYSF 155 (452)
Q Consensus 85 ~~~y~i~~~LG~G~~g~V~~a~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv-~l~~~~ 155 (452)
.++. -++.|..|-.-.+|++.... .++.|.+++.-... . ..-....|..+++.+...+|. ++++.|
T Consensus 105 ~~~I-~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~t---e-~lIdR~~E~~v~~~ls~~gi~P~l~~~f 179 (442)
T PTZ00296 105 EDDV-RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDV---D-ELYNPISEFEVYKTMSKYRIAPQLLNTF 179 (442)
T ss_pred cccE-EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCc---c-ceeCHHHHHHHHHHHHHCCCCCceEEEe
Confidence 3455 56777778888999987542 14678899874431 1 111345688888888654443 555555
Q ss_pred EcCCeEEEEEeecCCCCh
Q 012988 156 QDTEYLYLIMEYLPGGDM 173 (452)
Q Consensus 156 ~~~~~~~lV~E~~~ggsL 173 (452)
. + +.|.||++|..|
T Consensus 180 ~-g---g~I~efi~g~~l 193 (442)
T PTZ00296 180 S-G---GRIEEWLYGDPL 193 (442)
T ss_pred C-C---CEEEEeeCCccC
Confidence 3 2 357899987633
Done!