Query         012990
Match_columns 452
No_of_seqs    177 out of 2137
Neff          11.4
Searched_HMMs 29240
Date          Mon Mar 25 20:08:16 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012990.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012990hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3k9v_A 1,25-dihydroxyvitamin D 100.0 1.1E-65 3.6E-70  492.0  36.6  403   32-452    23-482 (482)
  2 3nxu_A Cytochrome P450 3A4; al 100.0 4.4E-65 1.5E-69  487.8  27.3  405   26-452     7-474 (485)
  3 3ld6_A Lanosterol 14-alpha dem 100.0 5.7E-65   2E-69  483.1  24.4  390   33-452    11-453 (461)
  4 3s79_A Cytochrome P450 19A1; o 100.0 3.7E-63 1.3E-67  476.7  36.5  394   26-452    38-495 (503)
  5 3tbg_A Cytochrome P450 2D6; mo 100.0 1.4E-63 4.8E-68  477.0  28.9  398   33-452    10-475 (479)
  6 3n9y_A Cholesterol SIDE-chain  100.0 2.6E-62 9.1E-67  468.8  33.3  401   33-452     9-474 (487)
  7 2fdv_A Cytochrome P450 2A6; CY 100.0 2.9E-62   1E-66  466.4  32.9  397   33-452    10-472 (476)
  8 3e6i_A CYPIIE1, P450-J, cytoch 100.0   1E-62 3.6E-67  470.4  28.6  398   31-452     8-471 (476)
  9 3pm0_A Cypib1, cytochrome P450 100.0   3E-63   1E-67  477.9  23.4  406   28-452     4-483 (507)
 10 3swz_A Steroid 17-alpha-hydrox 100.0 7.2E-63 2.5E-67  473.3  25.7  400   33-452     8-478 (494)
 11 1po5_A Cytochrome P450 2B4; ox 100.0 5.4E-62 1.9E-66  464.6  31.1  396   33-452    10-472 (476)
 12 2ve3_A Putative cytochrome P45 100.0 4.2E-62 1.4E-66  460.7  29.6  382   31-452    10-443 (444)
 13 3czh_A Cytochrome P450 2R1; vi 100.0 2.5E-61 8.7E-66  460.1  30.2  401   31-452    10-475 (481)
 14 2hi4_A Cytochrome P450 1A2; CY 100.0 1.6E-62 5.6E-67  470.3  21.9  399   33-452    16-487 (495)
 15 1r9o_A Cytochrome P450 2C9; mo 100.0 6.9E-62 2.3E-66  464.2  25.5  396   33-452    11-473 (477)
 16 2ij2_A Cytochrome P450 BM3; mo 100.0 6.2E-61 2.1E-65  455.8  31.7  393   33-452     3-451 (470)
 17 3qz1_A Steroid 21-hydroxylase; 100.0 4.2E-62 1.4E-66  468.6  17.5  390   31-452    27-483 (496)
 18 3i3k_A Lanosterol 14-alpha dem 100.0 2.3E-60 7.7E-65  452.0  25.6  389   33-450    11-452 (461)
 19 2cib_A Cytochrome P450 51; hem 100.0 1.3E-60 4.4E-65  452.0  23.3  388   33-452     4-448 (455)
 20 3dbg_A Putative cytochrome P45 100.0 9.5E-61 3.2E-65  454.9  22.2  386   32-451    22-460 (467)
 21 3mdm_A Cholesterol 24-hydroxyl 100.0 4.8E-59 1.6E-63  442.4  33.4  372   55-452    10-441 (456)
 22 3gw9_A Sterol 14alpha-demethyl 100.0   4E-60 1.4E-64  449.4  25.1  385   32-452     2-449 (450)
 23 3dax_A Cytochrome P450 7A1; ch 100.0 1.1E-56 3.8E-61  430.4  25.0  408   29-451     9-484 (491)
 24 3v8d_A Cholesterol 7-alpha-mon 100.0 5.8E-57   2E-61  431.8  22.8  408   28-450     8-483 (491)
 25 3b6h_A Prostacyclin synthase;  100.0 9.1E-56 3.1E-60  424.4  29.9  412   27-452    12-489 (498)
 26 1n97_A CYP175A1; electron tran 100.0 1.7E-55 5.8E-60  407.9  17.9  354   36-452     2-386 (389)
 27 3b98_A Prostaglandin I2 syntha 100.0 9.5E-55 3.2E-59  415.2  21.8  390   29-452    14-470 (475)
 28 2cd8_A Cytochrome P450 monooxy 100.0 3.5E-54 1.2E-58  404.2  21.3  377   29-452    22-428 (436)
 29 1izo_A P450bsbeta, cytochrome  100.0 1.8E-52 6.2E-57  391.7  28.8  376   39-452     6-415 (417)
 30 3awm_A Fatty acid alpha-hydrox 100.0 1.3E-51 4.3E-56  385.7  26.2  376   35-451     4-412 (415)
 31 1jfb_A Nitric-oxide reductase  100.0 2.3E-51 7.7E-56  382.6  25.6  372   34-448     2-403 (404)
 32 1ued_A P450 OXYC, P450 monooxy 100.0 4.4E-51 1.5E-55  380.0  23.6  364   32-449     9-406 (406)
 33 3dan_A Cytochrome P450 74A2; A 100.0 5.3E-50 1.8E-54  382.1  25.9  371   33-426     9-453 (473)
 34 2jjn_A Cytochrome P450 113A1;  100.0 1.1E-50 3.7E-55  378.2  20.2  374   23-452     8-406 (411)
 35 3dsk_A Cytochrome P450 74A, ch 100.0 1.2E-50 4.2E-55  388.6  21.0  391   32-441    27-485 (495)
 36 1cpt_A Cytochrome P450-TERP; o 100.0 7.4E-50 2.5E-54  374.6  22.5  385   32-452     5-428 (428)
 37 3ejb_B Biotin biosynthesis cyt 100.0 2.3E-49 7.8E-54  369.1  22.1  357   55-452    13-396 (404)
 38 2zbx_A Cytochrome P450-SU1; be 100.0 1.6E-49 5.6E-54  370.2  20.2  369   33-450     5-407 (412)
 39 1s1f_A Putative cytochrome P45 100.0 6.6E-50 2.2E-54  372.1  16.9  366   33-450     8-405 (406)
 40 1gwi_A CYP154C1, cytochrome P4 100.0 1.3E-49 4.5E-54  370.4  18.7  354   56-452    18-409 (411)
 41 2zwu_A Camphor 5-monooxygenase 100.0 1.2E-49 4.2E-54  370.6  17.4  370   32-452    10-410 (415)
 42 3buj_A CALO2; heme, iron, meta 100.0   7E-49 2.4E-53  364.5  21.7  354   56-452    14-396 (397)
 43 3abb_A CYP105D6, cytochrome P4 100.0 1.3E-49 4.3E-54  370.7  16.5  351   56-452    25-407 (408)
 44 3aba_A Cytochrome P450; oxidor 100.0 1.3E-49 4.3E-54  369.8  16.5  352   56-452    20-402 (403)
 45 3a4g_A Vitamin D hydroxylase;  100.0 6.7E-49 2.3E-53  365.4  20.5  351   55-452    20-401 (411)
 46 2uuq_A CYP130, cytochrome P450 100.0 8.6E-49 2.9E-53  365.0  19.1  353   55-452    25-413 (414)
 47 1odo_A Putative cytochrome P45 100.0 2.2E-48 7.4E-53  362.4  21.8  354   55-451    15-407 (408)
 48 2z3t_A Cytochrome P450; monoxy 100.0 9.3E-49 3.2E-53  366.1  19.2  355   56-451    21-415 (425)
 49 2dkk_A Cytochrome P450; CYP158 100.0 2.5E-49 8.5E-54  368.1  14.6  352   55-452    27-410 (411)
 50 4fb2_A P450CIN; heme, monooxyg 100.0 1.7E-48 5.9E-53  362.0  19.9  349   55-452    19-393 (398)
 51 1z8o_A 6-deoxyerythronolide B  100.0 2.8E-48 9.5E-53  361.2  21.1  349   56-449    15-402 (404)
 52 2xkr_A CYP142, putative cytoch 100.0 3.9E-48 1.3E-52  359.6  20.2  354   55-452    18-394 (398)
 53 2y5n_A MYCG, P-450-like protei 100.0 3.3E-48 1.1E-52  361.2  19.2  350   56-449    38-417 (417)
 54 3nc3_A Cytochrome P450 CYPX; c 100.0 2.1E-49 7.3E-54  371.9  11.2  363   56-451    54-440 (441)
 55 1q5d_A P450 epoxidase; cytochr 100.0 2.3E-48 7.9E-53  363.2  17.6  354   55-452    26-416 (419)
 56 3tkt_A Cytochrome P450; aromat 100.0 7.1E-48 2.4E-52  362.9  20.5  364   56-451    46-449 (450)
 57 2xbk_A PIMD protein; epoxidati 100.0   7E-48 2.4E-52  357.2  19.9  348   56-449    27-404 (404)
 58 3tyw_A Putative cytochrome P45 100.0 7.4E-48 2.5E-52  359.8  19.7  347   55-446    29-408 (417)
 59 3ivy_A Cytochrome P450 CYP125; 100.0 1.6E-48 5.5E-53  365.6  14.9  370   33-452    18-428 (433)
 60 2z36_A MOXA, cytochrome P450 t 100.0 5.7E-48 1.9E-52  359.4  18.1  350   56-450    23-408 (413)
 61 2wm5_A CYP124, putative cytoch 100.0 3.1E-47 1.1E-51  356.6  21.6  355   55-449    44-434 (435)
 62 1lfk_A OXYB, P450 monooxygenas 100.0 3.3E-47 1.1E-51  353.2  20.7  344   62-449    20-398 (398)
 63 3mgx_A Putative P450 monooxyge 100.0 3.2E-48 1.1E-52  360.8  13.7  353   55-452    37-415 (415)
 64 3lxh_A Cytochrome P450; heme,  100.0 8.7E-48   3E-52  359.8  16.7  355   55-452    38-417 (421)
 65 3r9b_A Cytochrome P450 164A2;  100.0 1.1E-46 3.9E-51  352.5  23.6  357   54-452    28-417 (418)
 66 3oft_A Cytochrome P450, CYP101 100.0 1.7E-47 5.8E-52  355.5  17.7  348   55-450    24-395 (396)
 67 3oo3_A OXY protein; cytochrome 100.0 6.9E-47 2.4E-51  349.9  21.6  346   55-449    12-384 (384)
 68 3rwl_A Cytochrome P450 alkane  100.0 2.7E-46 9.1E-51  349.3  22.2  356   55-451    38-426 (426)
 69 1io7_A Cytochrome P450 CYP119; 100.0 6.7E-46 2.3E-50  340.7  22.2  339   58-452     2-367 (368)
 70 1n40_A P450 MT2, cytochrome P4 100.0 1.3E-46 4.6E-51  348.7  14.9  346   56-449    17-396 (396)
 71 2wiy_A XPLA-heme, cytochrome P 100.0   6E-46 2.1E-50  343.8  17.7  350   56-449    21-393 (394)
 72 3b4x_A 367AA long hypothetical 100.0 1.3E-45 4.3E-50  338.3  17.3  336   58-451     2-366 (367)
 73 4dnj_A Putative cytochrome P45 100.0 3.9E-44 1.3E-48  333.2  17.8  366   39-451    18-411 (412)
 74 2rfb_A Cytochrome P450; heme,  100.0 1.2E-44   4E-49  329.2  12.9  306   66-427     2-324 (343)
 75 3p3o_A Cytochrome P450; monoox 100.0 3.8E-44 1.3E-48  334.2  16.6  351   56-451    34-415 (416)
 76 4dxy_A Cytochrome P450, CYP101 100.0 3.9E-41 1.3E-45  312.2  14.8  355   55-450    37-414 (417)
 77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 1.1E-40 3.7E-45  302.2   0.9  324   34-449    35-381 (381)
 78 1jdm_A Sarcolipin; helix, memb  47.0      26 0.00091   17.4   3.2   18   12-29     11-29  (31)
 79 2knc_A Integrin alpha-IIB; tra  46.8      17 0.00057   21.7   2.6   15   22-36     31-45  (54)
 80 2jwa_A Receptor tyrosine-prote  44.6      27 0.00093   19.8   3.1    6   23-28     33-38  (44)
 81 3bej_E Nuclear receptor coacti  35.8      37  0.0013   16.1   2.3   21  399-419     1-21  (26)
 82 2l8s_A Integrin alpha-1; trans  34.7      34  0.0012   20.3   2.6   15   22-36     28-42  (54)
 83 3ijw_A Aminoglycoside N3-acety  26.6      35  0.0012   28.6   2.4   30  343-373    64-107 (268)
 84 2k1a_A Integrin alpha-IIB; sin  24.0      93  0.0032   17.4   3.0   10    6-15      8-17  (42)
 85 2nyg_A YOKD protein; PFAM02522  23.6      41  0.0014   28.3   2.3   23  343-366    62-84  (273)
 86 1vf5_H Protein PET N; photosyn  23.3      61  0.0021   16.2   1.9   13    1-13      1-13  (29)
 87 1jb0_M Photosystem 1 reaction   23.1      72  0.0025   16.4   2.3   23    1-23      1-23  (31)

No 1  
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00  E-value=1.1e-65  Score=492.03  Aligned_cols=403  Identities=18%  Similarity=0.286  Sum_probs=319.0

Q ss_pred             ccCCCCCCCCCcccchHHhhhh--hhhHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccCCCCcchHH
Q 012990           32 KSGNKQKKYHPIGGTVFNQLLN--FNRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYS  108 (452)
Q Consensus        32 ~~~~pgP~~~p~~G~~~~~~~~--~~~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~  108 (452)
                      -+.+|||+++|++|+++.+...  .+.++..+.+++++|| +|++++++.++|+++||+++++|+.++ ..|.+++....
T Consensus        23 l~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~~~~r~~~~~  101 (482)
T 3k9v_A           23 VTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE-SAHPQRLEIKP  101 (482)
T ss_dssp             GGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTC-CSSCCCCCCHH
T ss_pred             CCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhc-CCCCCCCCchH
Confidence            3899999999999999888643  3468899999999999 588889989999999999999999875 67777654321


Q ss_pred             --HHHHh--cCCeeEecCchhHHHhHhhhhcCC-ChHHHHHhHHHHHHHHHHHHHHHHHHHhC-CCCcccHHHhHHHHhH
Q 012990          109 --ILKDL--LGDGIFTVDGEKWREQRKISSHEF-STKVLRDFSSAAFRKNAAKLAQLLSEAAN-SDKILDIQDLFMKSTL  182 (452)
Q Consensus       109 --~~~~~--~g~~i~~~~g~~w~~~R~~l~~~f-s~~~l~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~d~~~~~~~~~~  182 (452)
                        .....  .+.++++.+|+.|+++||+++++| +...++.+.+ .+++.++.+++.+.+... +|+++|+.+.+..+++
T Consensus       102 ~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~-~i~~~~~~l~~~l~~~~~~~g~~vd~~~~~~~~t~  180 (482)
T 3k9v_A          102 WKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMKLDK-KINEVLADFLERMDELCDERGRIPDLYSELNKWSF  180 (482)
T ss_dssp             HHHHHHHHTCCCCTTTCCHHHHHHHHHHHHHHHTCHHHHGGGHH-HHHHHHHHHHHHHHHHCCTTSCCTTHHHHHHHHHH
T ss_pred             HHHHHHhcCCCCCceeCCCchHHHHHHHhhHHhcChHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHH
Confidence              12222  357888899999999999999996 7888998885 899999999999987643 5678999999999999


Q ss_pred             HHHhhhccCCCCCCccCCC-chhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHh
Q 012990          183 DSIFKVAFGVELDSVCGSN-EEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTD  261 (452)
Q Consensus       183 ~~i~~~~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  261 (452)
                      ++|+.++||.+++..++.. +....+.+.+.............+ +.+..+++....++..+..+.+.+++++.++++.+
T Consensus       181 dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~  259 (482)
T 3k9v_A          181 ESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGKMMVTP-VELHKRLNTKVWQAHTLAWDTIFKSVKPCIDNRLQ  259 (482)
T ss_dssp             HHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGGGGSSSC-HHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhh-HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999987654322 223455555555443322111111 12333444444455566666777777777776653


Q ss_pred             hhh-----h-----------------------hHhh---------h----h------HHHHHHHHHHHhCCCcchhhhhh
Q 012990          262 QMH-----D-----------------------FQEE---------Y----T------SEKIVQEVKEATGAKDISDFLKV  294 (452)
Q Consensus       262 ~~~-----~-----------------------l~~~---------~----l------~~~l~~Ei~~~~~~~~~~~~~~~  294 (452)
                      ...     +                       ++++         |    |      |+++++||+++++.+.       
T Consensus       260 ~~~~~~~~d~l~~ll~~~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~-------  332 (482)
T 3k9v_A          260 RYSQQPGADFLCDIYQQDHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQ-------  332 (482)
T ss_dssp             HTTTCTTSCHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCTTC-------
T ss_pred             HhccCCchHHHHHHHhccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCC-------
Confidence            210     0                       0111         1    1      9999999999998653       


Q ss_pred             ccCCCHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCCCCCCCCCC
Q 012990          295 AGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERW  374 (452)
Q Consensus       295 ~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~  374 (452)
                        .++++++.+||||+|||+|+||++|+++...|.+.+|+++ +||.|||||.|.++.+++|+||++| +||++|+||||
T Consensus       333 --~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~r~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~-~~p~~F~PeRf  408 (482)
T 3k9v_A          333 --TPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVL-GEYALPKGTVLTLNTQVLGSSEDNF-EDSHKFRPERW  408 (482)
T ss_dssp             --CCCGGGGGGCHHHHHHHHHHHHHSCSCCEEEEECSSCEEE-TTEEECTTCEEEEECSGGGGCTTTC-SSTTSCCGGGG
T ss_pred             --CCCHHHHhhCHHHHHHHHHHhhcCCCCcCcccccCCceee-CCEEECCCCEEEEccccccCCCccC-CCcCccCcccc
Confidence              2689999999999999999999999999888888888776 9999999999999999999999999 99999999999


Q ss_pred             CCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcceeEEEecCCccccccceeeEecCCceeEEEeeC
Q 012990          375 LDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSETVNYRTMINLHIDGGLHVRVFHR  452 (452)
Q Consensus       375 l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  452 (452)
                      ++++..   ..+..|+|||.|+|.|+|++||++|+++++++|+++|+|++.++. +++....+++.|..+++|++++|
T Consensus       409 l~~~~~---~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~R  482 (482)
T 3k9v_A          409 LQKEKK---INPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNE-PVEMLHLGILVPSRELPIAFRPR  482 (482)
T ss_dssp             TCTTSC---CCGGGCCTTCCSTTSCSCHHHHHHHHHHHHHHHHHHEEEEESCCC-CCCEEESSSEEESSSCCEEEEEC
T ss_pred             CCCCCC---CCCccccCCCCCCcCCccHHHHHHHHHHHHHHHHHhcEEeccCCC-CcccccceeecCCCCcceEEeeC
Confidence            986532   346789999999999999999999999999999999999987643 56666677889999999999998


No 2  
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00  E-value=4.4e-65  Score=487.83  Aligned_cols=405  Identities=21%  Similarity=0.343  Sum_probs=303.1

Q ss_pred             hhhcccccCCCCCCCCCcccchHHhhhhhhhHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcc-cccCCCC
Q 012990           26 TKTLTQKSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTN-FDNYGKG  103 (452)
Q Consensus        26 ~~~~~~~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~-~~~~~~~  103 (452)
                      ...+++++.+|||+++|++|+++.+..   .++.++.+++++|| +|+++.++.++|+++||+++++|+.++ ...|.++
T Consensus         7 ~~~~~k~~~~PGP~~~PliGn~~~~~~---~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r   83 (485)
T 3nxu_A            7 SHGLFKKLGIPGPTPLPFLGNILSYHK---GFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNR   83 (485)
T ss_dssp             CTTHHHHHTCCCCCCBTTTBTGGGGGG---CHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCC
T ss_pred             cchHHhhCCCCCCCCcCeecCcHHhhc---ChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCC
Confidence            344667789999999999999988743   47888999999999 588889999999999999999999876 4566665


Q ss_pred             cchHHHHHHhcCCeeEecCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHHHHhHH
Q 012990          104 SYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLD  183 (452)
Q Consensus       104 ~~~~~~~~~~~g~~i~~~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~  183 (452)
                      +... . ....+.++++.+|+.|+++|++++++|+.++++.+.+ .+++.++.+++.+.+..+.|+++|+.+.+..++++
T Consensus        84 ~~~~-~-~~~~~~~l~~~~g~~w~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~~~~~g~~~d~~~~~~~~~~d  160 (485)
T 3nxu_A           84 RPFG-P-VGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVP-IIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMD  160 (485)
T ss_dssp             CCCS-C-CGGGGGSTTTCCHHHHHHHHHHHGGGGCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTCCEEHHHHHHHHHHH
T ss_pred             cccc-c-ccccccCccccCCcHHHHHHhhcChhcCHHHHHHHHH-HHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHH
Confidence            4332 1 1245677888899999999999999999999999985 89999999999998755567799999999999999


Q ss_pred             HHhhhccCCCCCCccCCCchhchHHHhHhHHHHHH-------HHHHHHHHHHHHHHhccch-HHH----HHHHHHH----
Q 012990          184 SIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMT-------LWRYVDIFWKIKKLLNIGS-EAR----LKQRIEV----  247 (452)
Q Consensus       184 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~----  247 (452)
                      +|+.++||.+++..++..   ..+.+.+.......       ....+....++..+++... .+.    +.+..+.    
T Consensus       161 vi~~~~fG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (485)
T 3nxu_A          161 VITSTSFGVNIDSLNNPQ---DPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKES  237 (485)
T ss_dssp             HHHHHHHSCCCCGGGCTT---CHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCccccccCCC---cHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhchHHHHHHHHHHHHHHHHH
Confidence            999999999998765433   22322222211100       0000000111122221100 000    1111100    


Q ss_pred             --------HHHHHHHHHHHHHhh---------hhh--------hHhh---------h----h------HHHHHHHHHHHh
Q 012990          248 --------IDTFVYKIIRKKTDQ---------MHD--------FQEE---------Y----T------SEKIVQEVKEAT  283 (452)
Q Consensus       248 --------~~~~~~~~i~~~~~~---------~~~--------l~~~---------~----l------~~~l~~Ei~~~~  283 (452)
                              ..+++..+++...+.         .++        ++++         |    |      |++|++|+++++
T Consensus       238 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~  317 (485)
T 3nxu_A          238 RLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVL  317 (485)
T ss_dssp             HHHCC---CCCHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred             HHhccCCCcccHHHHHHHhhhccccccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHh
Confidence                    013344444332110         001        1122         1    1      999999999998


Q ss_pred             CCCcchhhhhhccCCCHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccCCCeeecCCCEEEEehhhhcCCCCCcc
Q 012990          284 GAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWG  363 (452)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g  363 (452)
                      +.+.         .++++++.+||||+|||+|+||++|+++.+.|.+.+|+++ +||.|||||.|.++.+++|+||++| 
T Consensus       318 ~~~~---------~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~i-~g~~Ip~Gt~V~~~~~~~~~d~~~~-  386 (485)
T 3nxu_A          318 PNKA---------PPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEI-NGMFIPKGVVVMIPSYALHRDPKYW-  386 (485)
T ss_dssp             TTTC---------CCCHHHHHHCHHHHHHHHHHHHHSCSCSCEEEECCSCEEE-TTEEECTTCEEEECHHHHHTCTTTC-
T ss_pred             ccCC---------CCCHHHHhcChHHHHHHHHHHhcCCCccCcceeeCCCeeE-CCEEECCCCEEEEchHHhcCChhhc-
Confidence            7653         3699999999999999999999999999888888888777 9999999999999999999999999 


Q ss_pred             CCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcceeEEEecCCc-cccccceeeEecC
Q 012990          364 DDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSE-TVNYRTMINLHID  442 (452)
Q Consensus       364 ~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~  442 (452)
                      +||++|+||||++++..  ...+..|+|||.|+|.|+|++||++|+++++++|+++|+|++.++.. +.+...+.++.|.
T Consensus       387 ~dp~~F~PeR~l~~~~~--~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~p~  464 (485)
T 3nxu_A          387 TEPEKFLPERFSKKNKD--NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPE  464 (485)
T ss_dssp             SSTTSCCGGGGSHHHHT--TSCTTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEECCTTCCSSCCBCSSSSCCBS
T ss_pred             CCccCcCccccCCCccc--cCCCCCccCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCCcccCCCeeccCC
Confidence            99999999999965322  12466799999999999999999999999999999999999876532 3444456678898


Q ss_pred             CceeEEEeeC
Q 012990          443 GGLHVRVFHR  452 (452)
Q Consensus       443 ~~~~v~~~~r  452 (452)
                      ++++|++++|
T Consensus       465 ~~~~~~~~~r  474 (485)
T 3nxu_A          465 KPVVLKVESR  474 (485)
T ss_dssp             SCCEEEEEEC
T ss_pred             CCeEEEEEEc
Confidence            8999999987


No 3  
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00  E-value=5.7e-65  Score=483.14  Aligned_cols=390  Identities=18%  Similarity=0.277  Sum_probs=309.1

Q ss_pred             cCCCCCCC-CCcccchHHhhhhhhhHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccCCCCcchHHHH
Q 012990           33 SGNKQKKY-HPIGGTVFNQLLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSIL  110 (452)
Q Consensus        33 ~~~pgP~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~  110 (452)
                      +.||||++ +|++||++++..   +++.++.+++++|| +|++++++.++|+|+||+++++++.++...|.+++.+....
T Consensus        11 ~~PP~~~~~lP~iG~~~~~~~---~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~   87 (461)
T 3ld6_A           11 KSPPYIFSPIPFLGHAIAFGK---SPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLT   87 (461)
T ss_dssp             CCCCBCCCSSTTTBTHHHHHH---CHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHH
T ss_pred             CCCCCCCCCcCeeeeHHHhhh---CHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhh
Confidence            56777764 999999999854   48999999999999 58899999999999999999999988777788877766666


Q ss_pred             HHhcCCeeEe-cCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHHHHhHHHHhhhc
Q 012990          111 KDLLGDGIFT-VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVA  189 (452)
Q Consensus       111 ~~~~g~~i~~-~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~  189 (452)
                      ...+|.++++ .+|+.|+++|++++++|+...++.+.+ .+++.++++++.+.    .+..+|+.+.+..+++++++.++
T Consensus        88 ~~~~g~~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~-~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~  162 (461)
T 3ld6_A           88 TPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQHVS-IIEKETKEYFESWG----ESGEKNVFEALSELIILTASHCL  162 (461)
T ss_dssp             HHHHCTTSGGGSCHHHHHHHHHHHHHHSSHHHHHHHHH-HHHHHHHHHGGGGC----SEEEEEHHHHHHHHHHHHHHHHH
T ss_pred             hccCCCccccCCCcHHHHHHHHhccccccHHHHhhhhH-HHHHHHHHHHHHHh----hcCCccHHHHHHHHHHHHHHHHH
Confidence            7778877654 689999999999999999999999985 88888888887664    34578999999999999999999


Q ss_pred             cCCCCCCccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhhhh----
Q 012990          190 FGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHD----  265 (452)
Q Consensus       190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----  265 (452)
                      ||.+++...+     ..+.+.+..+...    +....+.+..+++.....+..++.+.+.+++.+.+++++.+.+.    
T Consensus       163 fG~~~~~~~~-----~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~d~  233 (461)
T 3ld6_A          163 HGKEIRSQLN-----EKVAQLYADLDGG----FSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQEKIDDI  233 (461)
T ss_dssp             TCHHHHHTCC-----HHHHHHHHHHHTT----SSHHHHHSCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCSH
T ss_pred             cCcchhhhhh-----hhhhhhhhhhhhh----hhhHHHhhhhhccCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcch
Confidence            9987654321     2222222222111    00111112233444555667778888889999888887643211    


Q ss_pred             ---h------------------------Hhh---------hh----------HHHHHHHHHHHhCCCcchhhhhhccCCC
Q 012990          266 ---F------------------------QEE---------YT----------SEKIVQEVKEATGAKDISDFLKVAGCIS  299 (452)
Q Consensus       266 ---l------------------------~~~---------~l----------~~~l~~Ei~~~~~~~~~~~~~~~~~~~~  299 (452)
                         +                        +++         |+          |+++++|++++++...        ..++
T Consensus       234 l~~ll~~~~~~~~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~--------~~~~  305 (461)
T 3ld6_A          234 LQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENL--------PPLT  305 (461)
T ss_dssp             HHHHHTCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTC--------CCCC
T ss_pred             hhhhHHhhhcccCCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHHHHHHhcccc--------cchh
Confidence               1                        111         11          9999999999998764        3358


Q ss_pred             HHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCC
Q 012990          300 EEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENG  379 (452)
Q Consensus       300 ~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~  379 (452)
                      .+++.+||||+|||+|+||++|+++...|++.+|+++ +||.|||||.|+++.+++|+||++| +||++|+||||+++++
T Consensus       306 ~~~l~~lpyl~avi~E~lRl~p~~~~~~r~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~-~dP~~F~PeRfl~~~~  383 (461)
T 3ld6_A          306 YDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTV-AGYTIPPGHQVCVSPTVNQRLKDSW-VERLDFNPDRYLQDNP  383 (461)
T ss_dssp             HHHHHTCHHHHHHHHHHHHHSCSCCCEEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTC-TTTTSCCGGGGGSCCH
T ss_pred             HHHHHHHhhhhheeeeccccCCchhccccccccceee-CCcccCCCCeeeechHhhcCCcccc-CCccccCccccCCCCc
Confidence            9999999999999999999999999999999999887 9999999999999999999999999 9999999999998754


Q ss_pred             CcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcceeEEEecCCccccccceeeEecCCceeEEEeeC
Q 012990          380 IFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSETVNYRTMINLHIDGGLHVRVFHR  452 (452)
Q Consensus       380 ~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  452 (452)
                      ..  ..+..|+|||+|+|.|+|++||++|++++++.||++|+|+++++..+......++..| +++.|++++|
T Consensus       384 ~~--~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~l~~~~~~~~~~~~~~~~p-~~~~v~~~~R  453 (461)
T 3ld6_A          384 AS--GEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHTP-ENPVIRYKRR  453 (461)
T ss_dssp             HH--HSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBCCSSSSCCB-SSCEEEEEEC
T ss_pred             cc--CCCCccccCCCcCcCChhHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcccccceEEcC-CceEEEEEEC
Confidence            32  2356799999999999999999999999999999999999987543332233444444 5788999998


No 4  
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00  E-value=3.7e-63  Score=476.69  Aligned_cols=394  Identities=19%  Similarity=0.230  Sum_probs=298.2

Q ss_pred             hhhcccccCCCCCCCCCcccchHHhhhhh-hhHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccCCCC
Q 012990           26 TKTLTQKSGNKQKKYHPIGGTVFNQLLNF-NRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKG  103 (452)
Q Consensus        26 ~~~~~~~~~~pgP~~~p~~G~~~~~~~~~-~~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~  103 (452)
                      .+.+++++.||||+++|++|+++.+.... ...+..+.+++++|| +|++++++.++|+++||++++++++++  .|+++
T Consensus        38 ~~~~~~~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~~--~~~~r  115 (503)
T 3s79_A           38 VWNYEGTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKHN--HYSSR  115 (503)
T ss_dssp             -------CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHSG--GGCCC
T ss_pred             HHHHhccCCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhcC--CCCCc
Confidence            33445568999999999999998875321 235678889999999 589999999999999999999999653  56655


Q ss_pred             cchHHHHH--HhcCCeeE-ecCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHHHH
Q 012990          104 SYNYSILK--DLLGDGIF-TVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKS  180 (452)
Q Consensus       104 ~~~~~~~~--~~~g~~i~-~~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~  180 (452)
                      +.......  ...|.+++ ..+|+.|+++|++++++|+...++.+.+ .+.+.++++++.+.+..+.+..+|+.+.+..+
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~f~~~~l~~~~~-~~~~~~~~~l~~l~~~~~~~~~vdl~~~~~~~  194 (503)
T 3s79_A          116 FGSKLGLQCIGMHEKGIIFNNNPELWKTTRPFFMKALSGPGLVRMVT-VCAESLKTHLDRLEEVTNESGYVDVLTLLRRV  194 (503)
T ss_dssp             CCCHHHHHHHTCTTSSSTTCCCHHHHHHHHHHHHHHTSTHHHHHHHH-HHHHHHHHHHTTGGGTBCTTSCBCHHHHHHHH
T ss_pred             chhhhhhhhhccCCCceeeCCCccHHHHHHHhhhHhhChHHHHHHHH-HHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHH
Confidence            43221221  22345654 4679999999999999999999999985 78888899988887654556789999999999


Q ss_pred             hHHHHhhhccCCCCCCccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHH
Q 012990          181 TLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKT  260 (452)
Q Consensus       181 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  260 (452)
                      ++++++.++||.+++.        .++.+.+.............+.  +...++ ...++..++.+.+.+++...+++++
T Consensus       195 ~~~vi~~~~fG~~~~~--------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~  263 (503)
T 3s79_A          195 MLDTSNTLFLRIPLDE--------SAIVVKIQGYFDAWQALLIKPD--IFFKIS-WLYKKYEKSVKDLKDAIEVLIAEKR  263 (503)
T ss_dssp             HHHHHHHHHTCCCCCH--------HHHHHHHHHHHHHHHHHTTCCH--HHHHSG-GGTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCcccCc--------hhHHHHHHHHHHHHHHHhcCcH--HHhhcc-hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999988752        2233333332222111111000  000111 1124455666777777777777655


Q ss_pred             hhhh---------hh--------------------------Hhh---------hh----------HHHHHHHHHHHhCCC
Q 012990          261 DQMH---------DF--------------------------QEE---------YT----------SEKIVQEVKEATGAK  286 (452)
Q Consensus       261 ~~~~---------~l--------------------------~~~---------~l----------~~~l~~Ei~~~~~~~  286 (452)
                      +..+         ++                          +++         |.          |+++++||++++++.
T Consensus       264 ~~~~~~~~~~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~  343 (503)
T 3s79_A          264 RRISTEEKLEECMDFATELILAEKRGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGER  343 (503)
T ss_dssp             HHHHTCTTTTTTCCHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTTS
T ss_pred             HHhhcccccchHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC
Confidence            4211         11                          111         11          999999999999843


Q ss_pred             cchhhhhhccCCCHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCC
Q 012990          287 DISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDA  366 (452)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p  366 (452)
                      .          ++.+++.+|||++|||+|+||++|+++...|++++|+++ +||.|||||.|.++.+++|+| ++| +||
T Consensus       344 ~----------~~~~~~~~lpyl~avi~E~lRl~p~~~~~~r~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d-~~~-~dp  410 (503)
T 3s79_A          344 D----------IKIDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVI-DGYPVKKGTNIILNIGRMHRL-EFF-PKP  410 (503)
T ss_dssp             C----------CCHHHHTTCHHHHHHHHHHHHHSCSSCCEEEECSSCEEE-TTEEECTTCEEEECHHHHTTT-SSC-SST
T ss_pred             C----------CCHHHHhcCHHHHHHHHhhhccCCCcccccccccCCeeE-CCEEECCCCEEEeehHHhCCC-ccC-CCh
Confidence            2          699999999999999999999999999988999999887 999999999999999999998 999 999


Q ss_pred             CCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcceeEEEecCCc--cccccceeeEecCCc
Q 012990          367 EEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSE--TVNYRTMINLHIDGG  444 (452)
Q Consensus       367 ~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~  444 (452)
                      ++|+||||++..      ....|+|||+|+|.|+|++||++|+++++++|+++|+|++.++..  +.....++++.|..+
T Consensus       411 ~~F~PeRf~~~~------~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~  484 (503)
T 3s79_A          411 NEFTLENFAKNV------PYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDET  484 (503)
T ss_dssp             TSCCGGGGSSCC------CTTTCCSSCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEEESTTCCTTTSCEEESSSEEECTT
T ss_pred             hhCChhhcCCCC------CcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCCCccccccccceeecCCCc
Confidence            999999999642      345799999999999999999999999999999999999987542  333446788888875


Q ss_pred             ---eeEEEeeC
Q 012990          445 ---LHVRVFHR  452 (452)
Q Consensus       445 ---~~v~~~~r  452 (452)
                         ++|++++|
T Consensus       485 ~~~~~v~~~~R  495 (503)
T 3s79_A          485 KNMLEMIFTPR  495 (503)
T ss_dssp             SCCCCEEEEEC
T ss_pred             cceeeEEeccC
Confidence               99999987


No 5  
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00  E-value=1.4e-63  Score=476.96  Aligned_cols=398  Identities=18%  Similarity=0.217  Sum_probs=286.8

Q ss_pred             cCCCCCCCCCcccchHHhhhhhhhHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccCCCCcchHHHHH
Q 012990           33 SGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILK  111 (452)
Q Consensus        33 ~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~  111 (452)
                      +.||||+++|++||++++.  ..+.+..+.+++++|| +|+++++++++|+|+||+++++|+.++...|+.++... ...
T Consensus        10 kLPPGP~~lP~iGn~~~~~--~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~-~~~   86 (479)
T 3tbg_A           10 KLPPGPLPLPGLGNLLHVD--FQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVP-ITQ   86 (479)
T ss_dssp             CCCCCSCCBTTTBTGGGCC--TTSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCG-GGG
T ss_pred             CCCCCCCCcCcccchHhhc--CCCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchH-HHH
Confidence            7899999999999998874  3457888999999999 58899999999999999999999988777887665432 111


Q ss_pred             H----hcCCeeE-ecCchhHHHhHhhhhcCCChHHHHHh-HHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHHHHhHHHH
Q 012990          112 D----LLGDGIF-TVDGEKWREQRKISSHEFSTKVLRDF-SSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSI  185 (452)
Q Consensus       112 ~----~~g~~i~-~~~g~~w~~~R~~l~~~fs~~~l~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~i  185 (452)
                      .    ..+.+++ ..+|+.|+++|+++.+.|+...+... ....+......+...+..  ..++.+|+.+.+..++++++
T Consensus        87 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~  164 (479)
T 3tbg_A           87 ILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFAN--HSGRPFRPNGLLDKAVSNVI  164 (479)
T ss_dssp             GGTCBTTBCCSTTCCSSHHHHHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHHHHHHT--TTTCCBCTHHHHHHHHHHHH
T ss_pred             HhccCCCCCceeeCCCCHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHh--ccCCcccHHHHHHHHHHHHH
Confidence            1    1224444 45799999999999999877666532 223455555666655544  45678999999999999999


Q ss_pred             hhhccCCCCCCccCCCchhchHHHhHhHHHHHHHHHHHHHH--HHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 012990          186 FKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIF--WKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM  263 (452)
Q Consensus       186 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  263 (452)
                      +.++||.+++..+..   ...+.+................+  .++...+. ....+.....+...+.+...++......
T Consensus       165 ~~~~fg~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (479)
T 3tbg_A          165 ASLTCGRRFEYDDPR---FLRLLDLAQEGLKEESGFLREVLNAVPVLLHIP-ALAGKVLRFQKAFLTQLDELLTEHRMTW  240 (479)
T ss_dssp             HHHHHSCCCCTTCHH---HHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGSH-HHHHHHTHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHhhcCCcccccchh---hhhhhhhhhhhhhhhhhhhhhhhcccchhccch-hhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999998764321   12222222222111111111100  00000000 1112222333344444444444332211


Q ss_pred             hh--------------------------------------hHhh---------hh----------HHHHHHHHHHHhCCC
Q 012990          264 HD--------------------------------------FQEE---------YT----------SEKIVQEVKEATGAK  286 (452)
Q Consensus       264 ~~--------------------------------------l~~~---------~l----------~~~l~~Ei~~~~~~~  286 (452)
                      +.                                      ++++         |+          |++|++||+.+++.+
T Consensus       241 ~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~~  320 (479)
T 3tbg_A          241 DPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQV  320 (479)
T ss_dssp             CTTSCCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSS
T ss_pred             hcccccchhhhhhhhhhhhcccCCccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHHHHHHHHHHHHHHhhc
Confidence            00                                      1111         11          999999999998776


Q ss_pred             cchhhhhhccCCCHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCC
Q 012990          287 DISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDA  366 (452)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p  366 (452)
                      .         .++.+++.+|||++|||+|+||++|+++...|+++.+++.++||.|||||.|+++.+++|+||++| +||
T Consensus       321 ~---------~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~~~-~dP  390 (479)
T 3tbg_A          321 R---------RPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVW-EKP  390 (479)
T ss_dssp             S---------CCCHHHHTTCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTS-SST
T ss_pred             c---------ccchhhhccccccccceeeeccccccccccceeecCCCceECCEEecCCCeeeechhhhcCChhhC-CCc
Confidence            3         369999999999999999999999999998887765544459999999999999999999999999 999


Q ss_pred             CCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcceeEEEecCCcccc--ccceeeEecCCc
Q 012990          367 EEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSETVN--YRTMINLHIDGG  444 (452)
Q Consensus       367 ~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~--~~~~~~~~~~~~  444 (452)
                      ++|+||||+++++..  .++.+|+|||+|+|.|+|++||++|+++++++||++|+|+++++...+.  ...+++..|. +
T Consensus       391 ~~F~PeRfl~~~~~~--~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~P~-~  467 (479)
T 3tbg_A          391 FRFHPEHFLDAQGHF--VKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVSPS-P  467 (479)
T ss_dssp             TSCCGGGGBCTTCCB--CCCTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEECCTTSCCCCSCEEESSSEEEC-C
T ss_pred             cccCccccCCCCccc--CCCCceecCCCCCcCChhHHHHHHHHHHHHHHHHHccEEEeCCCCCCccccccceeeecCC-C
Confidence            999999999876543  2467899999999999999999999999999999999999987643332  2346677775 8


Q ss_pred             eeEEEeeC
Q 012990          445 LHVRVFHR  452 (452)
Q Consensus       445 ~~v~~~~r  452 (452)
                      ++|+++||
T Consensus       468 ~~v~~~pR  475 (479)
T 3tbg_A          468 YELCAVPR  475 (479)
T ss_dssp             CCBEEEEC
T ss_pred             eEEEEEEC
Confidence            99999998


No 6  
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00  E-value=2.6e-62  Score=468.85  Aligned_cols=401  Identities=18%  Similarity=0.207  Sum_probs=304.0

Q ss_pred             cCCCCCCCCCcccchHHhhhh--hhhHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccCCCCcchHHH
Q 012990           33 SGNKQKKYHPIGGTVFNQLLN--FNRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSI  109 (452)
Q Consensus        33 ~~~pgP~~~p~~G~~~~~~~~--~~~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~  109 (452)
                      +.+|||++.++. +++.+...  ...++.++.+++++|| +|++++++.++|+++||+++++|+.++ +.|++++.....
T Consensus         9 ~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~f~~r~~~~~~   86 (487)
T 3n9y_A            9 NEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSE-GPNPERFLIPPW   86 (487)
T ss_dssp             GGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTC-CSSCCCCCCHHH
T ss_pred             hhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhC-CCCCCCCCCcHH
Confidence            789999998876 56665432  3467899999999999 588888988999999999999999876 567766533221


Q ss_pred             --HHH--hcCCeeEecCchhHHHhHhhhhcC-CChHHHHHhHHHHHHHHHHHHHHHHHHHh----CCCCcccHHHhHHHH
Q 012990          110 --LKD--LLGDGIFTVDGEKWREQRKISSHE-FSTKVLRDFSSAAFRKNAAKLAQLLSEAA----NSDKILDIQDLFMKS  180 (452)
Q Consensus       110 --~~~--~~g~~i~~~~g~~w~~~R~~l~~~-fs~~~l~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~d~~~~~~~~  180 (452)
                        ...  ..+.++++.+|+.|+++|++++++ |+.+.++.+.+ .+++.++.+++.+.+..    +++.++|+.+.+..+
T Consensus        87 ~~~~~~~~~~~~l~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~~~~~  165 (487)
T 3n9y_A           87 VAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNFLP-LLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRF  165 (487)
T ss_dssp             HHHHHHTTCCCCGGGCCHHHHHHHHHHHHHHHTSHHHHTTHHH-HHHHHHHHHHHHHHHHHHHHTSSSEEECCHHHHHHH
T ss_pred             HHHHHHccccCCCccCCcHHHHHHHHhcCcccCCchHHHHhhh-HHHHHHHHHHHHHHHHhcccccCCCCccHHHHHHHH
Confidence              111  235678889999999999999996 99999999985 88999999999987642    345689999999999


Q ss_pred             hHHHHhhhccCCCCCCccCCC-chhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHH
Q 012990          181 TLDSIFKVAFGVELDSVCGSN-EEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKK  259 (452)
Q Consensus       181 ~~~~i~~~~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  259 (452)
                      ++++|+.++||.+++..++.. .....+.+.+.............+ +.+.++++....++..+..+.+.+++...++++
T Consensus       166 t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  244 (487)
T 3n9y_A          166 AFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLP-PDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNF  244 (487)
T ss_dssp             HHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHHHGGGTTSC-HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHHHHHHHhcC-HHHHhhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998765433 223334444444333221111111 112233332333333444444444444444432


Q ss_pred             Hhh----h------hh-----------------------hHhh---------h----h------HHHHHHHHHHHhCCCc
Q 012990          260 TDQ----M------HD-----------------------FQEE---------Y----T------SEKIVQEVKEATGAKD  287 (452)
Q Consensus       260 ~~~----~------~~-----------------------l~~~---------~----l------~~~l~~Ei~~~~~~~~  287 (452)
                      .+.    .      .+                       ++++         |    |      |+++++||+++++...
T Consensus       245 ~~~~~~~~~~~~~~~d~l~~ll~~~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~  324 (487)
T 3n9y_A          245 YWELRQKGSVHHDYRGILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQ  324 (487)
T ss_dssp             HHHHHHHCCCCSSCCCHHHHHHHSCSSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHhcCCcccchHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcccc
Confidence            211    0      00                       1111         1    1      9999999999987553


Q ss_pred             chhhhhhccCCCHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCCC
Q 012990          288 ISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAE  367 (452)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~  367 (452)
                      .         ++.+++.+||||+|||+|+||++|+++.+.|.+.+|+++ +||.|||||.|.++.+++|+||++| +||+
T Consensus       325 ~---------~~~~~l~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~  393 (487)
T 3n9y_A          325 G---------DMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVL-RDYMIPAKTLVQVAIYALGREPTFF-FDPE  393 (487)
T ss_dssp             T---------CHHHHTTSCHHHHHHHHHHHHHSCSSSEEEEECSSCEEE-TTEEECTTCEEEEEHHHHHTCTTTS-SSTT
T ss_pred             c---------chhhhhhhCHHHHHHHHHHhhhCCcccccceeecCceee-CCEEECCCCEEEeCcHHhcCCcccC-CCcc
Confidence            1         368999999999999999999999999888988888777 9999999999999999999999999 9999


Q ss_pred             CCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcceeEEEecCCccccccceeeEecCCceeE
Q 012990          368 EFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSETVNYRTMINLHIDGGLHV  447 (452)
Q Consensus       368 ~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~v  447 (452)
                      +|+||||+++++.   .....++|||.|+|.|+|++||++|+++++++||++|+|++.++ .++.....+++.|.++++|
T Consensus       394 ~F~PeR~l~~~~~---~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~-~~~~~~~~~~~~p~~~~~~  469 (487)
T 3n9y_A          394 NFDPTRWLSKDKN---ITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHL-SDVGTTFNLILMPEKPISF  469 (487)
T ss_dssp             SCCGGGGTCSCTT---SSTTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTC-CCCCEEESSSEEESSCCCE
T ss_pred             cCChhhcCCCCCC---CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCEEEecCC-cccccceeeeecCCCCcee
Confidence            9999999975432   23567999999999999999999999999999999999998765 3555666788999999999


Q ss_pred             EEeeC
Q 012990          448 RVFHR  452 (452)
Q Consensus       448 ~~~~r  452 (452)
                      ++++|
T Consensus       470 ~~~~r  474 (487)
T 3n9y_A          470 TFWPF  474 (487)
T ss_dssp             EEEEC
T ss_pred             EEEEC
Confidence            99987


No 7  
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00  E-value=2.9e-62  Score=466.42  Aligned_cols=397  Identities=17%  Similarity=0.242  Sum_probs=303.7

Q ss_pred             cCCCCCCCCCcccchHHhhhhhhhHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccCCCCcchHHHHH
Q 012990           33 SGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILK  111 (452)
Q Consensus        33 ~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~  111 (452)
                      +.||||+++|++|+++.+.  ..+++.++.+++++|| ++++++++.++++++||+++++|+.++...|++++.......
T Consensus        10 ~~pPgP~~~p~iG~~~~~~--~~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~   87 (476)
T 2fdv_A           10 KLPPGPTPLPFIGNYLQLN--TEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDW   87 (476)
T ss_dssp             BCCCCCCCBTTTBTGGGCC--TTBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHHH
T ss_pred             CCCCCCCCCcccccHhhcC--CcchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHhh
Confidence            6799999999999998762  3457889999999999 577788888899999999999999766567776543321111


Q ss_pred             HhcCCeeEecCchhHHHhHhhhhcCCChHHH--HHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHHHHhHHHHhhhc
Q 012990          112 DLLGDGIFTVDGEKWREQRKISSHEFSTKVL--RDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVA  189 (452)
Q Consensus       112 ~~~g~~i~~~~g~~w~~~R~~l~~~fs~~~l--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~  189 (452)
                      ...+.++++++|+.|+++|++++++|+...+  +.+.+ .+++.++.+++.+.+  ..|.++|+.+.+..+++++|+.++
T Consensus        88 ~~~~~~l~~~~g~~~~~~Rr~~~~~f~~~~~~~~~~~~-~i~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~~vi~~~~  164 (476)
T 2fdv_A           88 VFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGIEE-RIQEEAGFLIDALRG--TGGANIDPTFFLSRTVSNVISSIV  164 (476)
T ss_dssp             HHTTCSSSSCCHHHHHHHHHHHHHHHHHTTTTSHHHHH-HHHHHHHHHHHHHHH--TTTCCBCCHHHHHHHHHHHHHHHH
T ss_pred             hcCCCCeEecCchHHHHHHHHHHHHHHHhCCChhhHHH-HHHHHHHHHHHHHHh--cCCCccChHHHHHHHHHHHHHHHH
Confidence            1236778888999999999999999987766  66774 888999999999976  345689999999999999999999


Q ss_pred             cCCCCCCccCCCchhchHHHhHhHHHHHHH--H-HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhh---h
Q 012990          190 FGVELDSVCGSNEEGTRFSSAFDDASAMTL--W-RYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQ---M  263 (452)
Q Consensus       190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~  263 (452)
                      ||.+++..+   +....+.+.+........  . .....++.+.++++ ...++..++.+.+.+++...++++++.   .
T Consensus       165 fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~  240 (476)
T 2fdv_A          165 FGDRFDYKD---KEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLP-GPQQQAFQLLQGLEDFIAKKVEHNQRTLDPN  240 (476)
T ss_dssp             HSSCCCTTC---HHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTSC-SHHHHHHHHHHHHHHHHHHHHHHHHTTCCTT
T ss_pred             cCCcCCCCC---HHHHHHHHHHHHHHHhhcccccchhhhhhhHHHhcC-cHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            999887432   122334444433332111  0 01111222123333 334556667777778888777776532   0


Q ss_pred             --hh----h----------------------------Hhh---------h----h------HHHHHHHHHHHhCCCcchh
Q 012990          264 --HD----F----------------------------QEE---------Y----T------SEKIVQEVKEATGAKDISD  290 (452)
Q Consensus       264 --~~----l----------------------------~~~---------~----l------~~~l~~Ei~~~~~~~~~~~  290 (452)
                        .+    +                            +++         |    |      |++|++||+++++.+.   
T Consensus       241 ~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~---  317 (476)
T 2fdv_A          241 SPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNR---  317 (476)
T ss_dssp             SCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSS---
T ss_pred             CCccHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCC---
Confidence              00    0                            111         1    1      9999999999987642   


Q ss_pred             hhhhccCCCHHHHhhcHHHHHHHHHhhcCCCCCC-CCccccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCCCCC
Q 012990          291 FLKVAGCISEEALEKMHYLHAAITETLRLYPAVP-VDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEF  369 (452)
Q Consensus       291 ~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F  369 (452)
                            .++.+++.+|||++|||+|+||++|+++ ...|.+.+|+++ +||.|||||.|.++.+++|+||++| +||++|
T Consensus       318 ------~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~Ip~Gt~V~~~~~~~~rd~~~~-~dp~~F  389 (476)
T 2fdv_A          318 ------QPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKF-RDFFLPKGTEVYPMLGSVLRDPSFF-SNPQDF  389 (476)
T ss_dssp             ------CCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEE-TTEEECTTCEEEECHHHHHTCTTTC-SSTTSC
T ss_pred             ------CCChhhhhcChHHHHHHHHHHHhcCCcccCcceeccCCeeE-CCEeeCCCCEEEeehHHhhCChhhc-CCcccc
Confidence                  2588999999999999999999999999 578888888776 9999999999999999999999999 999999


Q ss_pred             CCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcceeEEEecCCcc--ccc-cceeeEecCCcee
Q 012990          370 KPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSET--VNY-RTMINLHIDGGLH  446 (452)
Q Consensus       370 ~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~--~~~-~~~~~~~~~~~~~  446 (452)
                      +||||+++++...  ....|+|||+|+|.|+|++||++|+++++++|+++|+|++.++...  ... ..+++..| .++.
T Consensus       390 ~PeR~l~~~~~~~--~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~  466 (476)
T 2fdv_A          390 NPQHFLNEKGQFK--KSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIP-RNYT  466 (476)
T ss_dssp             CGGGGBCTTSCBC--CCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCSCSEESSSEEC-CCCC
T ss_pred             CchhhCCCCCCCC--CCcCcccCCCCCCCCCChHHHHHHHHHHHHHHHhhcEEEcCCCCCCCCccccccceeecC-CceE
Confidence            9999997543321  3568999999999999999999999999999999999999775422  223 45667777 6899


Q ss_pred             EEEeeC
Q 012990          447 VRVFHR  452 (452)
Q Consensus       447 v~~~~r  452 (452)
                      |++++|
T Consensus       467 v~~~~R  472 (476)
T 2fdv_A          467 MSFLPR  472 (476)
T ss_dssp             EEEEEC
T ss_pred             EEEEec
Confidence            999987


No 8  
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00  E-value=1e-62  Score=470.43  Aligned_cols=398  Identities=19%  Similarity=0.263  Sum_probs=301.0

Q ss_pred             cccCCCCCCCCCcccchHHhhhhhhhHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccCCCCcchHHH
Q 012990           31 QKSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSI  109 (452)
Q Consensus        31 ~~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~  109 (452)
                      +.+.||||+++|++|+++.+.  ..+++.++.+++++|| +|.+++++.++|+++||+++++|+.++...|++++... .
T Consensus         8 ~~~lpPgP~~~PliG~~~~~~--~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~-~   84 (476)
T 3e6i_A            8 KGKLPPGPFPLPIIGNLFQLE--LKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLP-A   84 (476)
T ss_dssp             --CCCCCCCCBTTTBTGGGCC--TTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCG-G
T ss_pred             CCCCCcCCCCcccccChhhhc--cccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCc-h
Confidence            348899999999999998862  3457899999999999 57888999999999999999999988767787765433 2


Q ss_pred             HHHhcCCeeEecCchhHHHhHhhhhcCCChHHH--HHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHHHHhHHHHhh
Q 012990          110 LKDLLGDGIFTVDGEKWREQRKISSHEFSTKVL--RDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFK  187 (452)
Q Consensus       110 ~~~~~g~~i~~~~g~~w~~~R~~l~~~fs~~~l--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~  187 (452)
                      +..+.+.++++++|+.|+++|+++.+.|+...+  ..+. ..+++.++.+++.+.+  ..|+++|+.+.+..+++++|+.
T Consensus        85 ~~~~~~~~l~~~~g~~w~~~Rr~~~~~l~~~~~~~~~~~-~~i~~~~~~l~~~l~~--~~~~~~d~~~~~~~~~~dvi~~  161 (476)
T 3e6i_A           85 FHAHRDRGIIFNNGPTWKDIRRFSLTTLRNYGMGKQGNE-SRIQREAHFLLEALRK--TQGQPFDPTFLIGCAPCNVIAD  161 (476)
T ss_dssp             GGGGTTSSSTTCCSTTHHHHHHHHHHHHHHTC-CCSHHH-HHHHHHHHHHHHHHHT--TTTSCBCTHHHHTHHHHHHHHH
T ss_pred             hheecCCCEEecCCcHHHHHHHHHHHHHHhcCCCchHHH-HHHHHHHHHHHHHHHH--hCCCCcChHHHHHHHHHHHHHH
Confidence            334444588889999999999977666654333  2234 4778889999999875  3567899999999999999999


Q ss_pred             hccCCCCCCccCCCchhchHHHhHhHHHHHHHHH---HHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 012990          188 VAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWR---YVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMH  264 (452)
Q Consensus       188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  264 (452)
                      ++||.+++..+   +....+.+.+..........   ....++.+..+++ ...++..+..+.+.+++.+.++++++..+
T Consensus       162 ~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  237 (476)
T 3e6i_A          162 ILFRKHFDYND---EKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLP-GSHRKVIKNVAEVKEYVSERVKEHHQSLD  237 (476)
T ss_dssp             HHHSCCCCTTC---HHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTSC-SHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHcCCCCCCCC---HHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcC-cHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence            99999987543   12233333333333221111   1111121333333 33455667777788888888877654210


Q ss_pred             -----h----h----------------------------Hhh---------h----h------HHHHHHHHHHHhCCCcc
Q 012990          265 -----D----F----------------------------QEE---------Y----T------SEKIVQEVKEATGAKDI  288 (452)
Q Consensus       265 -----~----l----------------------------~~~---------~----l------~~~l~~Ei~~~~~~~~~  288 (452)
                           +    +                            +++         |    |      |++|++||+++++.+. 
T Consensus       238 ~~~~~d~~~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~-  316 (476)
T 3e6i_A          238 PNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSR-  316 (476)
T ss_dssp             TTSCCSHHHHHHHHHHSSSSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTTTS-
T ss_pred             CCCCccHHHHHHHHHHhcccCCCCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCC-
Confidence                 0    0                            111         1    1      9999999999987653 


Q ss_pred             hhhhhhccCCCHHHHhhcHHHHHHHHHhhcCCCCCCC-CccccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCCC
Q 012990          289 SDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPV-DAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAE  367 (452)
Q Consensus       289 ~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~  367 (452)
                              .++++++.+||||+|||+|+||++|+++. ..|.+.+|+++ +||.|||||.|.++.+++|+||++| +||+
T Consensus       317 --------~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~-~~p~  386 (476)
T 3e6i_A          317 --------IPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIF-RGYLIPKGTVVVPTLDSVLYDNQEF-PDPE  386 (476)
T ss_dssp             --------CCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEE-TTEEECTTCEEEECSHHHHTCTTTS-SSTT
T ss_pred             --------CCChhhccCCchHHHHHHHHHHhccCCCccccccCCCCeeE-cCEEeCCCCEEEechHHhhCCcccC-CCcc
Confidence                    25899999999999999999999999996 67888888776 9999999999999999999999999 9999


Q ss_pred             CCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcceeEEEecCCcccccc---ceeeEecCCc
Q 012990          368 EFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSETVNYR---TMINLHIDGG  444 (452)
Q Consensus       368 ~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~---~~~~~~~~~~  444 (452)
                      +|+||||+++++...  ....|+|||.|+|.|+|++||++|+++++++||++|+|++..++.+++..   .+++..| .+
T Consensus       387 ~F~PeR~l~~~~~~~--~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~  463 (476)
T 3e6i_A          387 KFKPEHFLNENGKFK--YSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCIP-PR  463 (476)
T ss_dssp             SCCGGGGBCTTSSBC--CCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCTTTCCCSCSEESSSEEC-CC
T ss_pred             ccCchhhcCCCCCcc--CccceecCCCCCccCccHHHHHHHHHHHHHHHHHhcEeecCCCCCCCCCCcccCccccCC-CC
Confidence            999999998654322  45679999999999999999999999999999999999986543333332   3555555 47


Q ss_pred             eeEEEeeC
Q 012990          445 LHVRVFHR  452 (452)
Q Consensus       445 ~~v~~~~r  452 (452)
                      ++|++++|
T Consensus       464 ~~~~~~~R  471 (476)
T 3e6i_A          464 YKLCVIPR  471 (476)
T ss_dssp             CCEEEEEC
T ss_pred             eEEEEEec
Confidence            99999987


No 9  
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00  E-value=3e-63  Score=477.94  Aligned_cols=406  Identities=16%  Similarity=0.224  Sum_probs=279.8

Q ss_pred             hcccccCCCCCCCCCcccchHHhhhhhhhHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccCCCCcch
Q 012990           28 TLTQKSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYN  106 (452)
Q Consensus        28 ~~~~~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~  106 (452)
                      +...++.||||+++|++|+++.+.   ..++.++.+++++|| +|++++++.++|+|+||+++++|+.++...|.+++..
T Consensus         4 ~~~~~~~pPgP~~~P~iG~~~~~~---~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~   80 (507)
T 3pm0_A            4 KTSSKGKPPGPFAWPLIGNAAAVG---QAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSF   80 (507)
T ss_dssp             ---------------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCC
T ss_pred             ccCCCCCCcCCCCCCeeCchhhcC---ccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcc
Confidence            334458899999999999998874   457899999999999 5788899999999999999999998777888877665


Q ss_pred             HHHHHHhcCCeeEe-cCchhHHHhHhhhhcCCChHHH------HHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHHH
Q 012990          107 YSILKDLLGDGIFT-VDGEKWREQRKISSHEFSTKVL------RDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMK  179 (452)
Q Consensus       107 ~~~~~~~~g~~i~~-~~g~~w~~~R~~l~~~fs~~~l------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~  179 (452)
                      ........|.++++ .+|+.|+++|+++++.|+....      +.+. ..+.+.++.+++.+.+...++..+|+.+.+..
T Consensus        81 ~~~~~~~~g~~l~~~~~g~~w~~~R~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~  159 (507)
T 3pm0_A           81 ASFRVVSGGRSMAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLE-GHVLSEARELVALLVRGSADGAFLDPRPLTVV  159 (507)
T ss_dssp             HHHHHGGGGTCSSSSCSSHHHHHHHHHHHHHHHHSTTSSTTHHHHHH-HHHHHHHHHHHHHHHHTTGGGCCBCCHHHHHH
T ss_pred             hHHHhhcCCCceEECCCChHHHHHHHHHHHHHHHhcCCccchHHHHH-HHHHHHHHHHHHHHHhhcccCCCcChHHHHHH
Confidence            53332334567755 4699999999999987654332      3366 47888999999999875555778999999999


Q ss_pred             HhHHHHhhhccCCCCCCccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccc---hHHHHHHHHHHHHHHHHHHH
Q 012990          180 STLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIG---SEARLKQRIEVIDTFVYKII  256 (452)
Q Consensus       180 ~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i  256 (452)
                      +++++++.++||.+++..+   +....+.+.+..............+.++..+++..   ..++..+..+.+.+++...+
T Consensus       160 ~~~dvi~~~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~i  236 (507)
T 3pm0_A          160 AVANVMSAVCFGCRYSHDD---PEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKF  236 (507)
T ss_dssp             HHHHHHHHHHTSCCCCTTC---HHHHHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccccCCCCC---HHHHHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999987532   12233333333333221110000011111222211   23444555555556665555


Q ss_pred             HHHHhhh----------------------------------hh--------hHhh---------h----h------HHHH
Q 012990          257 RKKTDQM----------------------------------HD--------FQEE---------Y----T------SEKI  275 (452)
Q Consensus       257 ~~~~~~~----------------------------------~~--------l~~~---------~----l------~~~l  275 (452)
                      +++++..                                  ++        ++++         |    |      |++|
T Consensus       237 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl  316 (507)
T 3pm0_A          237 LRHCESLRPGAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRV  316 (507)
T ss_dssp             HHHHHHCCTTCCCCSHHHHHHHHHHHHHSCC----CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred             HHHHhccccccCCccHHHHHHHHhhhhccccccCCCCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHH
Confidence            5443210                                  00        0111         1    1      9999


Q ss_pred             HHHHHHHhCCCcchhhhhhccCCCHHHHhhcHHHHHHHHHhhcCCCCCCC-CccccccCCccCCCeeecCCCEEEEehhh
Q 012990          276 VQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPV-DAKMCFSDDTLPDGFSVRKGDMVCYQAYA  354 (452)
Q Consensus       276 ~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~  354 (452)
                      ++||+.+++.+.         .++.+++.+||||+|||+|+||++|+++. ..|.+.+|+++ +||.|||||.|.++.++
T Consensus       317 ~~Ei~~~~~~~~---------~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~~r~~~~d~~~-~g~~ip~Gt~v~~~~~~  386 (507)
T 3pm0_A          317 QAELDQVVGRDR---------LPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSV-LGYHIPKDTVVFVNQWS  386 (507)
T ss_dssp             HHHHHHHTCTTS---------CCCGGGGGGCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEE-TTEEECTTCEEEEBSHH
T ss_pred             HHHHHHhcCCCC---------CCChhhcccChHHHHHHHHHHhcCCCcccCCCccccCCceE-cCEEECCCCEEEeChHH
Confidence            999999987653         25899999999999999999999999997 56766677666 99999999999999999


Q ss_pred             hcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcceeEEEecCCc-cccc
Q 012990          355 MGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSE-TVNY  433 (452)
Q Consensus       355 ~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~-~~~~  433 (452)
                      +|+||++| +||++|+||||+++++.........|+|||.|+|.|+|++||++|+++++++||++|+|++.++.. +...
T Consensus       387 ~~~d~~~~-~dp~~F~PeRfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~  465 (507)
T 3pm0_A          387 VNHDPLKW-PNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNF  465 (507)
T ss_dssp             HHSCTTTC-SSSSSCCGGGGBCTTSCBCHHHHTTCCSSCCSTTCCSCHHHHHHHHHHHHHHHHHHEEEEECTTCCSCCCE
T ss_pred             HhCCcccC-CCcCccCCCcccCCCCcccCCCcccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHeEEecCCCCCCCCCC
Confidence            99999999 999999999999865432221235799999999999999999999999999999999999976532 2222


Q ss_pred             cceeeEecCCceeEEEeeC
Q 012990          434 RTMINLHIDGGLHVRVFHR  452 (452)
Q Consensus       434 ~~~~~~~~~~~~~v~~~~r  452 (452)
                      ..+++..|. +++|++++|
T Consensus       466 ~~~~~~~p~-~~~v~~~~R  483 (507)
T 3pm0_A          466 SYGLTIKPK-SFKVNVTLR  483 (507)
T ss_dssp             EESSSEEEC-SCCEEEEES
T ss_pred             CCCccccCC-CcEEEEEEc
Confidence            345566665 689999887


No 10 
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00  E-value=7.2e-63  Score=473.28  Aligned_cols=400  Identities=18%  Similarity=0.261  Sum_probs=295.1

Q ss_pred             cCCCCCCCCCcccchHHhhhhhhhHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccCCCCcchHHHHH
Q 012990           33 SGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILK  111 (452)
Q Consensus        33 ~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~  111 (452)
                      +.||||+++|++||++.+.. .+.++..+.+|+++|| +|.+++++.++|+|+||+++++++.++...|++++... ...
T Consensus         8 ~~PPgP~~lPliGnl~~l~~-~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~-~~~   85 (494)
T 3swz_A            8 KYPKSLLSLPLVGSLPFLPR-HGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMA-TLD   85 (494)
T ss_dssp             ----CCBCCCEEEEESSCTT-SSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCH-HHH
T ss_pred             CCCCCCCCCCeEcchHHhCC-CCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcH-HHH
Confidence            78999999999999987643 2347889999999999 58899999999999999999999998878888877654 222


Q ss_pred             Hhc--CCeeEec-CchhHHHhHhhhhcCCCh--HHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHHHHhHHHHh
Q 012990          112 DLL--GDGIFTV-DGEKWREQRKISSHEFST--KVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIF  186 (452)
Q Consensus       112 ~~~--g~~i~~~-~g~~w~~~R~~l~~~fs~--~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~i~  186 (452)
                      .+.  +.+++++ +|+.|+++|++++++|+.  ..+..+. ..++++++.+++.+.+  ..++++|+...+..+++++|+
T Consensus        86 ~~~~~~~gl~~~~~g~~wr~~Rr~~~~~f~~~~~~~~~~~-~~i~~~~~~l~~~l~~--~~~~~vd~~~~~~~~t~dvi~  162 (494)
T 3swz_A           86 IASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLE-KIICQEISTLCDMLAT--HNGQSIDISFPVFVAVTNVIS  162 (494)
T ss_dssp             HHTTTTCSSSSSCSSHHHHHHHHHHHHHTTTTSSSTTCHH-HHHHHHHHHHHHHHHH--TTTEEECCHHHHHHHHHHHHH
T ss_pred             HhccCCCCeEeCCCCHHHHHHHHHHHHHHHHhcchHHHHH-HHHHHHHHHHHHHHHH--cCCCcccHHHHHHHHHHHHHH
Confidence            222  4567666 599999999999999974  4466676 4888899999998876  457789999999999999999


Q ss_pred             hhccCCCCCCccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhh---
Q 012990          187 KVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM---  263 (452)
Q Consensus       187 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---  263 (452)
                      .++||.+++..+   +....+.+.............+..+.++.++++....++..+..+.+.++++.+++++++..   
T Consensus       163 ~~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  239 (494)
T 3swz_A          163 LICFNTSYKNGD---PELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKFRSD  239 (494)
T ss_dssp             HHHHSCCCCTTC---THHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCCSHHHHHHHHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             HHHcCCcCCCCC---HHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            999999886432   11122222222211111100011111122233333344455555555555555555443210   


Q ss_pred             --------------------------------hhh--------Hhh---------hh----------HHHHHHHHHHHhC
Q 012990          264 --------------------------------HDF--------QEE---------YT----------SEKIVQEVKEATG  284 (452)
Q Consensus       264 --------------------------------~~l--------~~~---------~l----------~~~l~~Ei~~~~~  284 (452)
                                                      +.+        +++         |.          |+++++||+++++
T Consensus       240 ~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~  319 (494)
T 3swz_A          240 SITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVG  319 (494)
T ss_dssp             CCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred             chhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC
Confidence                                            000        111         11          9999999999998


Q ss_pred             CCcchhhhhhccCCCHHHHhhcHHHHHHHHHhhcCCCCCCC-CccccccCCccCCCeeecCCCEEEEehhhhcCCCCCcc
Q 012990          285 AKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPV-DAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWG  363 (452)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g  363 (452)
                      .+.         .++++++.+|||++|||+|+||++|+++. ..|.+.+|+++ +||.|||||.|+++.+++|+||++| 
T Consensus       320 ~~~---------~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~-  388 (494)
T 3swz_A          320 FSR---------TPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSI-GEFAVDKGTEVIINLWALHHNEKEW-  388 (494)
T ss_dssp             SSS---------CCCGGGGGTCHHHHHHHHHHHHHSCSSTTCSCEECSSSEEE-TTEEECTTCEEEECHHHHHHCTTTS-
T ss_pred             CCC---------CCCHHHHhcCHHHHHHHHHHHHhcCCcccccceecCCCceE-CCEEeCCCCEEEEehHHhhCCcccC-
Confidence            753         36899999999999999999999999998 56777777776 9999999999999999999999999 


Q ss_pred             CCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcceeEEEecCCccc--cccceeeEec
Q 012990          364 DDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSETV--NYRTMINLHI  441 (452)
Q Consensus       364 ~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~--~~~~~~~~~~  441 (452)
                      +||++|+||||+++++.........|+|||.|+|.|+|++||++|++++++.||++|+|+++++...+  ....+.+..|
T Consensus       389 ~dp~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p  468 (494)
T 3swz_A          389 HQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGIPKVVFLI  468 (494)
T ss_dssp             SSTTSCCGGGGBCTTSSSBCCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHHEEEECCSSCCCCCCSCEESSSEEC
T ss_pred             CCcccCCcccccCCCCccccCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhcEEeeCCCCCCCCCCCccceeecC
Confidence            99999999999987644322345689999999999999999999999999999999999987654322  2234556666


Q ss_pred             CCceeEEEeeC
Q 012990          442 DGGLHVRVFHR  452 (452)
Q Consensus       442 ~~~~~v~~~~r  452 (452)
                       .+++|++++|
T Consensus       469 -~~~~v~~~~R  478 (494)
T 3swz_A          469 -DSFKVKIKVR  478 (494)
T ss_dssp             -CCCCEEEEEC
T ss_pred             -CCcEEEEEEc
Confidence             5899999987


No 11 
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00  E-value=5.4e-62  Score=464.59  Aligned_cols=396  Identities=19%  Similarity=0.283  Sum_probs=299.1

Q ss_pred             cCCCCCCCCCcccchHHhhhhhhhHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccCCCCcchHHHHH
Q 012990           33 SGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILK  111 (452)
Q Consensus        33 ~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~  111 (452)
                      +.||||+++|++|+++.+  ...+++..+.+++++|| +|+++.++.++|+++||+.+++|+.++...|++++... .+.
T Consensus        10 ~~pPgP~~~p~iG~~~~~--~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~-~~~   86 (476)
T 1po5_A           10 KLPPGPSPLPVLGNLLQM--DRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIA-VVD   86 (476)
T ss_dssp             CCCCCSCCBTTTBTGGGC--CTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGG-GGC
T ss_pred             CCCcCCCCCCccccHHhc--cCCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcH-HHH
Confidence            689999999999999876  23457899999999999 57888888889999999999999976656777654322 121


Q ss_pred             H-hcCCeeEecCchhHHHhHhhhhcCCChH--HHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHHHHhHHHHhhh
Q 012990          112 D-LLGDGIFTVDGEKWREQRKISSHEFSTK--VLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKV  188 (452)
Q Consensus       112 ~-~~g~~i~~~~g~~w~~~R~~l~~~fs~~--~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~  188 (452)
                      . ..+.++++++|+.|+++|+++.++|+..  .++.+.+ .+++.++.+++.+.+.  .|.++|+.+.+..+++++|+.+
T Consensus        87 ~~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~~-~i~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~vi~~~  163 (476)
T 1po5_A           87 PIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEE-RIQEEARCLVEELRKS--KGALLDNTLLFHSITSNIICSI  163 (476)
T ss_dssp             SCCSSCCCCCSSHHHHHHHHHHHHHHHHHSCCCHHHHHH-HHHHHHHHHHHHHHHT--TTCCBCCHHHHHHHHHHHHHHH
T ss_pred             hhcCCCceEecCCcHHHHHHHHHHHHHHHhCCChhHHHH-HHHHHHHHHHHHHHhc--CCCccCHHHHHHHHHHHHHHHH
Confidence            2 1356788889999999999999999876  4566774 7888999999999763  4568999999999999999999


Q ss_pred             ccCCCCCCccCCCchhchHHHhHhHHHHHH--HH-HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhh--h
Q 012990          189 AFGVELDSVCGSNEEGTRFSSAFDDASAMT--LW-RYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQ--M  263 (452)
Q Consensus       189 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~  263 (452)
                      +||.+++..+   .....+.+.+.......  .. .....++.+.++++. ..++..++.+.+.+++...++++++.  .
T Consensus       164 ~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~lp~-~~~~~~~~~~~~~~~~~~~i~~r~~~~~~  239 (476)
T 1po5_A          164 VFGKRFDYKD---PVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFPG-THRQIYRNLQEINTFIGQSVEKHRATLDP  239 (476)
T ss_dssp             HHSSCCCTTC---HHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTSSC-SHHHHHHHHHHHHHHHHHHHHHHHTTCCT
T ss_pred             HcCCCCCCCC---HHHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhcCc-HHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            9999886422   11222322222222110  00 111111222333432 23455566667777777777766531  0


Q ss_pred             ---hh----h----------------------------Hhh---------h----h------HHHHHHHHHHHhCCCcch
Q 012990          264 ---HD----F----------------------------QEE---------Y----T------SEKIVQEVKEATGAKDIS  289 (452)
Q Consensus       264 ---~~----l----------------------------~~~---------~----l------~~~l~~Ei~~~~~~~~~~  289 (452)
                         .+    +                            +++         |    |      |++|++||+++++.+.  
T Consensus       240 ~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~--  317 (476)
T 1po5_A          240 SNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR--  317 (476)
T ss_dssp             TSCCSHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSS--
T ss_pred             CCcccHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCC--
Confidence               00    1                            111         1    1      9999999999987642  


Q ss_pred             hhhhhccCCCHHHHhhcHHHHHHHHHhhcCCCCCCC-CccccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCCCC
Q 012990          290 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPV-DAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEE  368 (452)
Q Consensus       290 ~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~  368 (452)
                             .++.+++.+|||++|||+|+||++|+++. ..|.+.+|+++ +||.|||||.|.++.+++||||++| +||++
T Consensus       318 -------~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~Ip~Gt~v~~~~~~~~rdp~~~-~dp~~  388 (476)
T 1po5_A          318 -------PPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQF-RGYVIPKNTEVFPVLSSALHDPRYF-ETPNT  388 (476)
T ss_dssp             -------CCCGGGGGGCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEE-TTEEECTTCEEEECHHHHHTCTTTC-SSTTS
T ss_pred             -------CCChHHHhcCcHHHHHHHHHHHhccCCCCCCccccCCCcee-cCEecCCCCEEEeehHhHhcCcccc-CCccc
Confidence                   25899999999999999999999999995 78888888776 9999999999999999999999999 99999


Q ss_pred             CCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcceeEEEecCCcc--ccc-cceeeEecCCce
Q 012990          369 FKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSET--VNY-RTMINLHIDGGL  445 (452)
Q Consensus       369 F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~--~~~-~~~~~~~~~~~~  445 (452)
                      |+||||+++++...  ....|+|||+|+|.|+|++||++|+++++++||++|+|++.++...  ... ..+++..| .++
T Consensus       389 F~PeR~l~~~~~~~--~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~  465 (476)
T 1po5_A          389 FNPGHFLDANGALK--RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGNVP-PSY  465 (476)
T ss_dssp             CCGGGGBCTTSCBC--CCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECSSCGGGCCCCCCSTTSSCCC-CCC
T ss_pred             cCchhhCCCCCCcc--CCccccCCCCccccCcchHHHHHHHHHHHHHHHhceEEeCCCCCCCCCccCCcCceeecC-cce
Confidence            99999997543322  3567999999999999999999999999999999999998765422  222 44666777 689


Q ss_pred             eEEEeeC
Q 012990          446 HVRVFHR  452 (452)
Q Consensus       446 ~v~~~~r  452 (452)
                      .|++++|
T Consensus       466 ~v~~~~R  472 (476)
T 1po5_A          466 QIRFLAR  472 (476)
T ss_dssp             CBEEEEC
T ss_pred             EEEEEec
Confidence            9999987


No 12 
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00  E-value=4.2e-62  Score=460.73  Aligned_cols=382  Identities=20%  Similarity=0.250  Sum_probs=297.7

Q ss_pred             cccCCCCCCCCCcccchHHhhhhhhhHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccCCCCcchHHH
Q 012990           31 QKSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSI  109 (452)
Q Consensus        31 ~~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~  109 (452)
                      +.+.||||+++|++|+++.+..+   ++ ++.+++++|| +|++..++.+.++++||+.+++|+.++...|+..  ....
T Consensus        10 ~~~~pPgp~~~P~iG~~~~~~~~---~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~--~~~~   83 (444)
T 2ve3_A           10 SLPIPPGDFGLPWLGETLNFLND---GD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQAT--WPLS   83 (444)
T ss_dssp             CCCCCCCCCCBTTTBTHHHHHHC---TT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEE--CCHH
T ss_pred             CCCCCCCCCCCCccccHHHHhcC---cH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccc--hhHH
Confidence            34789999999999999887543   45 7789999999 5788877788999999999999998764455532  1123


Q ss_pred             HHHhcCC-eeEecCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHHHHhHHHHhhh
Q 012990          110 LKDLLGD-GIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKV  188 (452)
Q Consensus       110 ~~~~~g~-~i~~~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~  188 (452)
                      ....+|. ++++.+|+.|+++|++++++|+.++++.+.+ .+++.++++++.+..    ++++|+.+.+..+++++++.+
T Consensus        84 ~~~~~g~~~l~~~~g~~~~~~R~~~~~~f~~~~l~~~~~-~i~~~~~~l~~~l~~----~~~vd~~~~~~~~~~~vi~~~  158 (444)
T 2ve3_A           84 TRILLGPNALATQMGEIHRSRRKILYQAFLPRTLDSYLP-KMDGIVQGYLEQWGK----ANEVIWYPQLRRMTFDVAATL  158 (444)
T ss_dssp             HHHHHCTTSGGGCCHHHHHHHHHHHHGGGCHHHHHTTHH-HHHHHHHHHHHHHHH----SSEEEHHHHHHHHHHHHHHHH
T ss_pred             HHHHhCccccccCCchHHHHHHHHHHhhcCHHHHHHHHH-HHHHHHHHHHHHhcC----CCcEeHHHHHHHHHHHHHHHH
Confidence            3445565 7888899999999999999999999999985 899999999999853    458999999999999999999


Q ss_pred             ccCCCCCCccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhh---hh
Q 012990          189 AFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM---HD  265 (452)
Q Consensus       189 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~  265 (452)
                      +|| +....+      ..+.+.+.........  +      ...++....++..++.+.+.+++.+.++++++..   .+
T Consensus       159 ~fG-~~~~~~------~~~~~~~~~~~~~~~~--~------~~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~d  223 (444)
T 2ve3_A          159 FMG-EKVSQN------PQLFPWFETYIQGLFS--L------PIPLPNTLFGKSQRARALLLAELEKIIKARQQQPPSEED  223 (444)
T ss_dssp             HTC-HHHHSC------TTHHHHHHHHHHHHSS--C------CCCSTTSHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCSS
T ss_pred             HcC-CCcccH------HHHHHHHHHHHHHHhc--C------CccCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccC
Confidence            999 332111      2233333332221100  0      0011222234555666777788888887765430   11


Q ss_pred             ----h------------------------Hhh---------h----h------HHHHHHHHHHHhCCCcchhhhhhccCC
Q 012990          266 ----F------------------------QEE---------Y----T------SEKIVQEVKEATGAKDISDFLKVAGCI  298 (452)
Q Consensus       266 ----l------------------------~~~---------~----l------~~~l~~Ei~~~~~~~~~~~~~~~~~~~  298 (452)
                          +                        +++         |    |      |++|++|++.+.+...          +
T Consensus       224 ~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~----------~  293 (444)
T 2ve3_A          224 ALGILLAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQE----------L  293 (444)
T ss_dssp             HHHHHHHCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHSSCCSSC----------C
T ss_pred             HHHHHHhccccCCCCCCHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhccCCC----------C
Confidence                1                        111         1    1      9999999999886542          5


Q ss_pred             CHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCC
Q 012990          299 SEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDEN  378 (452)
Q Consensus       299 ~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~  378 (452)
                      +++++.+||||+|||+|+||++|+++...|.+.+|+++ +||.|||||.|.++.+++|+||++| +||++|+||||++++
T Consensus       294 ~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~l~~~  371 (444)
T 2ve3_A          294 TAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQF-QGFHFPKGWLVSYQISQTHADPDLY-PDPEKFDPERFTPDG  371 (444)
T ss_dssp             CHHHHTTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCGGGSSTTS
T ss_pred             ChhhhhcChHHHHHHHHHHhcCCCccCccceeCCCeeE-CCEEECCCCEEEechHHhcCChhhc-CCcCccCccccCCCC
Confidence            99999999999999999999999999888999888887 9999999999999999999999999 999999999999754


Q ss_pred             CCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcceeEEEecCCccccccceeeEecCCceeEEEeeC
Q 012990          379 GIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSETVNYRTMINLHIDGGLHVRVFHR  452 (452)
Q Consensus       379 ~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  452 (452)
                      ... ...+..|+|||+|+|.|+|++||++|+++++++|+++|++++.++. ++......++.|.++++|++++|
T Consensus       372 ~~~-~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~l~v~~~~r  443 (444)
T 2ve3_A          372 SAT-HNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQ-NLELVVTPSPRPKDNLRVKLHSL  443 (444)
T ss_dssp             TTT-TSCTTSCCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEEECSSC-CCCEEESSSEEETTCCEEEEEEC
T ss_pred             ccc-CCCCceeeCCCCCCccCccHHHHHHHHHHHHHHHHHhCEEEeCCCC-CcceeccccccCCCCceEEEEeC
Confidence            311 1235679999999999999999999999999999999999987643 44445566788999999999987


No 13 
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00  E-value=2.5e-61  Score=460.12  Aligned_cols=401  Identities=18%  Similarity=0.261  Sum_probs=297.8

Q ss_pred             cccCCCCCCCCCcccchHHhhhhhhhHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccCCCCcchHHH
Q 012990           31 QKSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSI  109 (452)
Q Consensus        31 ~~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~  109 (452)
                      +++.||||+++|++|+++.+......++..+.+++++|| ++.+++++.++++++||+++++|+.++...|++++... .
T Consensus        10 ~~~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~-~   88 (481)
T 3czh_A           10 PMGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLP-L   88 (481)
T ss_dssp             --CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCH-H
T ss_pred             CCCCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcH-H
Confidence            347899999999999998874321127889999999999 57788888889999999999999987766787765432 2


Q ss_pred             HHHhc-CCeeE-ecCchhHHHhHhhhhcCCChHHH--HHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHHHHhHHHH
Q 012990          110 LKDLL-GDGIF-TVDGEKWREQRKISSHEFSTKVL--RDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSI  185 (452)
Q Consensus       110 ~~~~~-g~~i~-~~~g~~w~~~R~~l~~~fs~~~l--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~i  185 (452)
                      +..+. +.+++ ..+|+.|+++|++++++|+..++  ..+. ..+++.++.+++.+.+  .+|+++|+.+.+..+++++|
T Consensus        89 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~~~~~~~-~~i~~~~~~l~~~l~~--~~~~~~d~~~~~~~~~~~vi  165 (481)
T 3czh_A           89 FMKMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFE-SKILEETKFFNDAIET--YKGRPFDFKQLITNAVSNIT  165 (481)
T ss_dssp             HHHHHTTCSSTTCCSSHHHHHHHHHHHHHHHHTTTTSTTHH-HHHHHHHHHHHHHHHT--TTTCCBCCHHHHHHHHHHHH
T ss_pred             HHhhcCCCCeEeCCCChHHHHHHHHHHHHHHHhcCChHHHH-HHHHHHHHHHHHHHHH--cCCCCcCHHHHHHHHHHHHH
Confidence            22333 34544 47899999999999999976544  4566 4888899999999875  34568999999999999999


Q ss_pred             hhhccCCCCCCccCCCchhchHHHhHhHHHHHHHHHH--HHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 012990          186 FKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRY--VDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM  263 (452)
Q Consensus       186 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  263 (452)
                      +.++||.+++..+   +....+.+.+...........  ...++++.++++....++..++.+.+.+++...++++++..
T Consensus       166 ~~~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~  242 (481)
T 3czh_A          166 NLIIFGERFTYED---TDFQHMIELFSENVELAASASVFLYNAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEKASVNR  242 (481)
T ss_dssp             HHHHHSSCCCTTC---HHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCSSSHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHcCCCCCCCC---HHHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999876321   122333333333332211000  11111111233333445566667777777777777664320


Q ss_pred             -----hh------------------------h--------Hhh---------h----h------HHHHHHHHHHHhCCCc
Q 012990          264 -----HD------------------------F--------QEE---------Y----T------SEKIVQEVKEATGAKD  287 (452)
Q Consensus       264 -----~~------------------------l--------~~~---------~----l------~~~l~~Ei~~~~~~~~  287 (452)
                           .+                        +        +++         |    |      |++|++|++++++.+.
T Consensus       243 ~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~  322 (481)
T 3czh_A          243 KPQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNG  322 (481)
T ss_dssp             CTTCCSSHHHHHHHHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSS
T ss_pred             CCCchHHHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCC
Confidence                 00                        0        111         1    1      9999999999987542


Q ss_pred             chhhhhhccCCCHHHHhhcHHHHHHHHHhhcCCCCCCC-CccccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCC
Q 012990          288 ISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPV-DAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDA  366 (452)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p  366 (452)
                               .++++++.+|||++|||+|+||++|+++. ..|.+.+|+++ +||.|||||.|.++.+++|+||++| +||
T Consensus       323 ---------~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP  391 (481)
T 3czh_A          323 ---------KPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVV-RGYSIPKGTTVITNLYSVHFDEKYW-RDP  391 (481)
T ss_dssp             ---------CCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEE-TTEEECTTCEEEEEHHHHHTCTTTC-SST
T ss_pred             ---------CCChhhhhhChHHHHHHHHHHhhccccccCcceeecCCeEE-eCEEcCCCCEEEechHHHhCCcccC-CCc
Confidence                     36899999999999999999999999995 67888888776 9999999999999999999999999 999


Q ss_pred             CCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcceeEEEecCCc-cccccceeeEecCCce
Q 012990          367 EEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSE-TVNYRTMINLHIDGGL  445 (452)
Q Consensus       367 ~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~  445 (452)
                      ++|+||||+++++..  .....|+|||.|+|.|+|++||++|+++++++||++|++++.++.. +.....+++..|. ++
T Consensus       392 ~~F~PeR~l~~~~~~--~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~-~~  468 (481)
T 3czh_A          392 EVFHPERFLDSSGYF--AKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQPQ-PY  468 (481)
T ss_dssp             TSCCGGGGBCTTSCB--CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECGGGCCCCCCCCSSSSCCCC-CC
T ss_pred             cccCCCceeCCCCCC--cCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHheEEeCCCCCCCCcccCCCceecCC-ce
Confidence            999999999754321  2467899999999999999999999999999999999999865431 2222345566655 68


Q ss_pred             eEEEeeC
Q 012990          446 HVRVFHR  452 (452)
Q Consensus       446 ~v~~~~r  452 (452)
                      .++++||
T Consensus       469 ~~~~~~~  475 (481)
T 3czh_A          469 LICAERR  475 (481)
T ss_dssp             CBEEEEC
T ss_pred             EEEEEec
Confidence            8888876


No 14 
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00  E-value=1.6e-62  Score=470.27  Aligned_cols=399  Identities=19%  Similarity=0.242  Sum_probs=293.9

Q ss_pred             cCCCCCCCCCcccchHHhhhhhhhHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccCCCCcchHHHHH
Q 012990           33 SGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILK  111 (452)
Q Consensus        33 ~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~  111 (452)
                      ..+|||+++|++|+++.+.   +.++..+.+++++|| +|.+++++.++++++||+++++|+.++...|++++... .+.
T Consensus        16 p~~PgP~~~p~~G~~~~~~---~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~-~~~   91 (495)
T 2hi4_A           16 KSPPEPWGWPLLGHVLTLG---KNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLY-TST   91 (495)
T ss_dssp             BCCCCCCCBTTTBTHHHHT---TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCH-HHH
T ss_pred             CCCCCCCCCcceeeHHhcC---ccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcH-HHH
Confidence            3449999999999998873   347889999999999 57788888899999999999999987766788765443 222


Q ss_pred             Hh-cCCeeEec--CchhHHHhHhhhhcCCCh---HHH---H---HhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHHH
Q 012990          112 DL-LGDGIFTV--DGEKWREQRKISSHEFST---KVL---R---DFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMK  179 (452)
Q Consensus       112 ~~-~g~~i~~~--~g~~w~~~R~~l~~~fs~---~~l---~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~  179 (452)
                      .. .+.+++++  +|+.|+++|++++++|+.   .++   .   .+. ..+++.++.+++.+.+...+|+++|+.+.+..
T Consensus        92 ~~~~~~~l~~~~~~g~~w~~~Rr~~~~~f~~~s~~~~~~~~~~~~~~-~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~  170 (495)
T 2hi4_A           92 LITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCYLE-EHVSKEAKALISRLQELMAGPGHFDPYNQVVV  170 (495)
T ss_dssp             TSTTSCCTTTSSCCSHHHHHHHHHHHHHHHHTTTSBCSSCSSCBHHH-HHHHHHHHHHHHHHHHHHHTTSCBCHHHHHHH
T ss_pred             HhcCCCCEEEcCCCChHHHHHHHHHHHHHHHhccCcccccchhhhHH-HHHHHHHHHHHHHHHHhccCCCccchHHHHHH
Confidence            22 24677776  699999999999998543   222   1   466 47888999999999765445678999999999


Q ss_pred             HhHHHHhhhccCCCCCCccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHH
Q 012990          180 STLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKK  259 (452)
Q Consensus       180 ~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  259 (452)
                      +++++|+.++||.+++..+   +....+.+.+..+...........+.++.++++....++..++.+.+.+++.+.++++
T Consensus       171 ~~~dvi~~~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~r  247 (495)
T 2hi4_A          171 SVANVIGAMCFGQHFPESS---DEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLWFLQKTVQEH  247 (495)
T ss_dssp             HHHHHHHHHHHGGGSCTTC---HHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCCCC---HHHHHHHHHHHHHHHhcccchHHHHhHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999876321   1123333333333221100000001111122332234455566666777777777665


Q ss_pred             Hhh--h---hh----hH----------------------------hh---------h----h------HHHHHHHHHHHh
Q 012990          260 TDQ--M---HD----FQ----------------------------EE---------Y----T------SEKIVQEVKEAT  283 (452)
Q Consensus       260 ~~~--~---~~----l~----------------------------~~---------~----l------~~~l~~Ei~~~~  283 (452)
                      ++.  .   .+    ++                            ++         |    |      |++|++||++++
T Consensus       248 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~  327 (495)
T 2hi4_A          248 YQDFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVI  327 (495)
T ss_dssp             HHTCCTTCCCSHHHHHHHHHHHCCEETTEECCTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHT
T ss_pred             HHhhcccccccHHHHHHHHhhhccCccccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHhc
Confidence            432  0   01    11                            11         1    1      999999999998


Q ss_pred             CCCcchhhhhhccCCCHHHHhhcHHHHHHHHHhhcCCCCCCC-CccccccCCccCCCeeecCCCEEEEehhhhcCCCCCc
Q 012990          284 GAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPV-DAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIW  362 (452)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~  362 (452)
                      +.+.         .++.+++.+|||++|||+|+||++|+++. ..|.+.+|+++ +||.|||||.|.++.+++|+||++|
T Consensus       328 ~~~~---------~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~  397 (495)
T 2hi4_A          328 GRER---------RPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTL-NGFYIPKKCCVFVNQWQVNHDPELW  397 (495)
T ss_dssp             TTSS---------CCCGGGSTTCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEE-TTEEECTTCEEEEBHHHHHHCTTTC
T ss_pred             CCCC---------CCChHHhccCHHHHHHHHHHHHccCCccCCCccccCCCeeE-eCeEECCCCEEEeChHHhhCCcccC
Confidence            7642         25889999999999999999999999996 67888888776 9999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCC-cccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcceeEEEecCCc-cccccceeeEe
Q 012990          363 GDDAEEFKPERWLDENGI-FQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSE-TVNYRTMINLH  440 (452)
Q Consensus       363 g~~p~~F~P~R~l~~~~~-~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~  440 (452)
                       +||++|+||||+++++. ........|+|||+|+|.|+|++||++|+++++++|+++|+|++.++.. +.+...+++..
T Consensus       398 -~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  476 (495)
T 2hi4_A          398 -EDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPIYGLTMK  476 (495)
T ss_dssp             -SSTTSCCGGGGBCTTSSSBCHHHHTTCCCSCCGGGCCTTHHHHHHHHHHHHHHHHHHCEEECCTTCCCCCCCBCSSSCB
T ss_pred             -CCcCccCcccccCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEeCCCCCCCCccccCCceec
Confidence             99999999999975432 1111346799999999999999999999999999999999999876432 23334466666


Q ss_pred             cCCce-eEEEeeC
Q 012990          441 IDGGL-HVRVFHR  452 (452)
Q Consensus       441 ~~~~~-~v~~~~r  452 (452)
                      |. ++ +|+++ |
T Consensus       477 p~-~~~~v~~~-R  487 (495)
T 2hi4_A          477 HA-RCEHVQAR-R  487 (495)
T ss_dssp             CC-CCCCBEEE-C
T ss_pred             CC-CcceEEEE-E
Confidence            76 45 88887 6


No 15 
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00  E-value=6.9e-62  Score=464.23  Aligned_cols=396  Identities=17%  Similarity=0.257  Sum_probs=289.5

Q ss_pred             cCCCCCCCCCcccchHHhhhhhhhHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccCCCCcchHHHHH
Q 012990           33 SGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILK  111 (452)
Q Consensus        33 ~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~  111 (452)
                      +.||||+++|++|+++.+  ...+++..+.+++++|| +++++.++.+.|+++||+++++|+.++...|++++... .+.
T Consensus        11 ~~pPgP~~~p~iG~~~~~--~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~-~~~   87 (477)
T 1r9o_A           11 KLPPGPTPLPVIGNILQI--GIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFP-LAE   87 (477)
T ss_dssp             BCCCCSSSCC-----CCB--CHHHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCS-CCC
T ss_pred             CCCCCCCCCceeccHhhc--CCCChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcch-hhh
Confidence            689999999999998776  23457889999999999 57788888889999999999999976656777644221 111


Q ss_pred             H-hcCCeeEecCchhHHHhHhhhhcCCChH--HHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHHHHhHHHHhhh
Q 012990          112 D-LLGDGIFTVDGEKWREQRKISSHEFSTK--VLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKV  188 (452)
Q Consensus       112 ~-~~g~~i~~~~g~~w~~~R~~l~~~fs~~--~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~  188 (452)
                      . ..|.++++++|+.|+++|+++.++|+..  .++.+.+ .+++.++.+++.+.+  ..+.++|+.+.+..+++++|+.+
T Consensus        88 ~~~~~~~l~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~-~i~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~~vi~~~  164 (477)
T 1r9o_A           88 RANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIED-RVQEEARCLVEELRK--TKASPCDPTFILGCAPCNVICSI  164 (477)
T ss_dssp             TTTCTTSSTTCCHHHHHHHHHHHHHHHTTSSSCSSCHHH-HHHHHHHHHHHHHHT--TTTSCBCTHHHHHHHHHHHHHHH
T ss_pred             hccCCCceEecCChHHHHHHHHHHHHHHHhCCChHHHHH-HHHHHHHHHHHHHHh--cCCCccChHHHHHHHHHHHHHHH
Confidence            1 2356788889999999999999999876  3455664 788899999999875  24568999999999999999999


Q ss_pred             ccCCCCCCccCCCchhchHHHhHhHHHHHHH--H-HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhh--h
Q 012990          189 AFGVELDSVCGSNEEGTRFSSAFDDASAMTL--W-RYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQ--M  263 (452)
Q Consensus       189 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~  263 (452)
                      +||.+++..+   +....+.+.+........  . .....++.+.++++ ...++..++.+.+.+++...++++++.  .
T Consensus       165 ~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp-~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~  240 (477)
T 1r9o_A          165 IFHKRFDYKD---QQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFP-GTHNKLLKNVAFMKSYILEKVKEHQESMDM  240 (477)
T ss_dssp             HHSCCCCTTC---HHHHHHHHHHHHHHHHHTCCBC-------CCCSCCT-TCHHHHHHHHHHHHHHHHHHHHHHHHTCCT
T ss_pred             HccCcCCCCC---HHHHHHHHHHHHHHHhhccchhHHHhhccHHHHhcc-hHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence            9999886432   112233333333221110  0 00001111111222 122445556666667777766665431  0


Q ss_pred             ---hh----h----------------------------Hhh---------h----h------HHHHHHHHHHHhCCCcch
Q 012990          264 ---HD----F----------------------------QEE---------Y----T------SEKIVQEVKEATGAKDIS  289 (452)
Q Consensus       264 ---~~----l----------------------------~~~---------~----l------~~~l~~Ei~~~~~~~~~~  289 (452)
                         .+    +                            +++         |    |      |++|++||+++++.+.  
T Consensus       241 ~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~--  318 (477)
T 1r9o_A          241 NNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNR--  318 (477)
T ss_dssp             TCCCSHHHHHHHHHHHHTTSCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSS--
T ss_pred             CCchHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCC--
Confidence               00    1                            111         1    1      9999999999987642  


Q ss_pred             hhhhhccCCCHHHHhhcHHHHHHHHHhhcCCCCCCC-CccccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCCCC
Q 012990          290 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPV-DAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEE  368 (452)
Q Consensus       290 ~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~  368 (452)
                             .++.+++.+|||++|||+|+||++|+++. ..|.+.+|+++ +||.|||||.|.++.+++|+||++| +||++
T Consensus       319 -------~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~Ip~Gt~V~~~~~~~~rd~~~~-~dP~~  389 (477)
T 1r9o_A          319 -------SPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKF-RNYLIPKGTTILISLTSVLHDNKEF-PNPEM  389 (477)
T ss_dssp             -------CCCGGGGGGCHHHHHHHHHHHHHHTSSTTCSCEECSSCEEE-TTEEECTTCEEEECSHHHHTCTTTS-SSTTS
T ss_pred             -------CCChHhhccCcHHHHHHHHHHHhcCCCCCCCceeccCCccc-cceecCCCCEEEEecHHhhCCcccC-CCccc
Confidence                   25889999999999999999999999995 78888888776 9999999999999999999999999 99999


Q ss_pred             CCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcceeEEEecCCcc--ccc-cceeeEecCCce
Q 012990          369 FKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSET--VNY-RTMINLHIDGGL  445 (452)
Q Consensus       369 F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~--~~~-~~~~~~~~~~~~  445 (452)
                      |+||||+++++...  ....|+|||.|+|.|+|++||++|+++++++||++|+|++.++...  ... ..+++..| .++
T Consensus       390 F~PeR~l~~~~~~~--~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~  466 (477)
T 1r9o_A          390 FDPHHFLDEGGNFK--KSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFASVP-PFY  466 (477)
T ss_dssp             CCGGGGBCTTSCBC--CCTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCCCBCCSSSCBC-CCC
T ss_pred             cCccceECCCCCcC--ccccccCCCCccCCCCCHHHHHHHHHHHHHHHHHhcEEecCCCCCCCCccCCcCceeecC-CCe
Confidence            99999997543322  3568999999999999999999999999999999999998765422  222 34666677 689


Q ss_pred             eEEEeeC
Q 012990          446 HVRVFHR  452 (452)
Q Consensus       446 ~v~~~~r  452 (452)
                      ++++++|
T Consensus       467 ~~~~~~R  473 (477)
T 1r9o_A          467 QLCFIPI  473 (477)
T ss_dssp             CEEEEEC
T ss_pred             EEEEEEe
Confidence            9999887


No 16 
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00  E-value=6.2e-61  Score=455.84  Aligned_cols=393  Identities=21%  Similarity=0.360  Sum_probs=296.1

Q ss_pred             cCCCCCCCCCcccchHHhhhhhhhHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccCCCCcc-hHHHH
Q 012990           33 SGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSY-NYSIL  110 (452)
Q Consensus        33 ~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~-~~~~~  110 (452)
                      +.+|||+++|++|+++.+.  .+.++..+.+++++|| +|+++.++.+.|+++||+++++|+.+.  .|.+... ....+
T Consensus         3 ~~~PGP~~~p~iG~l~~~~--~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~~--~f~~~~~~~~~~~   78 (470)
T 2ij2_A            3 KEMPQPKTFGELKNLPLLN--TDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES--RFDKNLSQALKFV   78 (470)
T ss_dssp             CCCCCCCCCGGGTTGGGGC--SSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTT--TEEECCCHHHHHH
T ss_pred             CCCCCCCCCCccccHHHHh--cccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhhc--CcCcCchhHHHHH
Confidence            4689999999999998863  2357788899999999 578888888999999999999999643  3543221 11122


Q ss_pred             HHhcCCeeEec--CchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHHHHhHHHHhhh
Q 012990          111 KDLLGDGIFTV--DGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKV  188 (452)
Q Consensus       111 ~~~~g~~i~~~--~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~  188 (452)
                      ....+.++++.  +|+.|+++|++++++|+...++.+.+ .+++.++++++.+... ..+.++|+.+.+..+++++|+.+
T Consensus        79 ~~~~~~~l~~~~~~g~~w~~~Rr~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~~-~~~~~vd~~~~~~~~~~~vi~~~  156 (470)
T 2ij2_A           79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHA-MMVDIAVQLVQKWERL-NADEHIEVPEDMTRLTLDTIGLC  156 (470)
T ss_dssp             HHHHTTSGGGSCTTSHHHHHHHHHHGGGGSTTTHHHHHH-HHHHHHHHHHHHHHTC-CTTCCEEHHHHHHHHHHHHHHHH
T ss_pred             HHhcCCceEEcCCCchHHHHHHHHhccccCHHHHHHHHH-HHHHHHHHHHHHHHhh-CCCCeEEHHHHHHHHHHHHHHHH
Confidence            33456777765  89999999999999999999999985 8899999999988753 23568999999999999999999


Q ss_pred             ccCCCCCCccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhhh---h
Q 012990          189 AFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMH---D  265 (452)
Q Consensus       189 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~  265 (452)
                      +||.+++..+.+.  ...+.+.+.............+  ++..+++....++..++.+.+.+++..+++++++...   +
T Consensus       157 ~fG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~d  232 (470)
T 2ij2_A          157 GFNYRFNSFYRDQ--PHPFITSMVRALDEAMNKLQRA--NPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDD  232 (470)
T ss_dssp             HHSCCCCGGGCSS--CCHHHHHHHHHHHHHHHTC-----CTTSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSS
T ss_pred             HcCCcccccccCC--CCHHHHHHHHHHHHHHHHHhhh--hhHhhccchHHHHHHHHHHHHHHHHHHHHHHHHhcccCchh
Confidence            9999987542211  1334444433332211110000  1111121122344555666677777777776543211   1


Q ss_pred             ----h-------------------------Hhh---------h----h------HHHHHHHHHHHhCCCcchhhhhhccC
Q 012990          266 ----F-------------------------QEE---------Y----T------SEKIVQEVKEATGAKDISDFLKVAGC  297 (452)
Q Consensus       266 ----l-------------------------~~~---------~----l------~~~l~~Ei~~~~~~~~~~~~~~~~~~  297 (452)
                          +                         +++         |    |      |++|++|++++++.+.          
T Consensus       233 ll~~ll~~~~~~~~~~ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~----------  302 (470)
T 2ij2_A          233 LLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV----------  302 (470)
T ss_dssp             HHHHHHHCCCTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCSSS----------
T ss_pred             HHHHHHhccCcccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCC----------
Confidence                0                         111         1    1      9999999999987643          


Q ss_pred             CCHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccCCC-eeecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCC
Q 012990          298 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDG-FSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLD  376 (452)
Q Consensus       298 ~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g-~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~  376 (452)
                      ++++++.+|||++|||+|+||++|+++...|++.+|+++ +| |.|||||.|.++.+++||||++||+||++|+|||| +
T Consensus       303 ~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~r~~~~d~~~-~g~~~Ip~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeR~-~  380 (470)
T 2ij2_A          303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL-GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-E  380 (470)
T ss_dssp             CCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEE-TTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSCCGGGG-S
T ss_pred             CCHHHHhCCHHHHHHHHHHHhcCCCccccceeccCCccc-CCceEeCCCCEEEechHHhcCCHhhhCCCccccCcccc-C
Confidence            599999999999999999999999999888888888776 88 99999999999999999999999999999999999 2


Q ss_pred             CCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcceeEEEecCCccccccceeeEecCCceeEEEeeC
Q 012990          377 ENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSETVNYRTMINLHIDGGLHVRVFHR  452 (452)
Q Consensus       377 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  452 (452)
                      +   .....+..|+|||.|+|.|+|++||++|+++++++||++|+|+ .+++.++....+++..|. +++|++++|
T Consensus       381 ~---~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~-~~~~~~~~~~~~~~~~p~-~~~v~~~~R  451 (470)
T 2ij2_A          381 N---PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDIKETLTLKPE-GFVVKAKSK  451 (470)
T ss_dssp             S---GGGSCTTSCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEE-CTTCCCCCEEESSSEEET-TCEEEEEEC
T ss_pred             C---CCcCCCccccCCCCCCCcCCcHHHHHHHHHHHHHHHHHHeeEe-eCCCCccccccceEecCC-CeEEEEEEc
Confidence            1   1122356799999999999999999999999999999999998 333323444456677887 999999987


No 17 
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00  E-value=4.2e-62  Score=468.55  Aligned_cols=390  Identities=19%  Similarity=0.231  Sum_probs=289.1

Q ss_pred             cccCCCCCCCCCcccchHHhhhhhhhHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccCCCCcchHHH
Q 012990           31 QKSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSI  109 (452)
Q Consensus        31 ~~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~  109 (452)
                      ..+.||||++      ++++  ..++++..+.+++++|| +|++++++.++|+|+||+++++|+.++...|++++.....
T Consensus        27 ~~~lPPGP~~------l~~~--~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~~~   98 (496)
T 3qz1_A           27 NLHLPPLVPG------FLHL--LQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSY   98 (496)
T ss_dssp             --CCCCBCSC------SCTT--SSSCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCTTT
T ss_pred             CCCCCcCCcc------cccc--CCCcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcchH
Confidence            3489999987      2222  13457899999999999 5788899999999999999999998876778876654322


Q ss_pred             HHHhcCC-eeEecC-chhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHHHHhHHHHhh
Q 012990          110 LKDLLGD-GIFTVD-GEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFK  187 (452)
Q Consensus       110 ~~~~~g~-~i~~~~-g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~  187 (452)
                      .....+. ++++++ |+.|+++|++++++|+.+.++.+.+ .+++.++++++.+.+  ..|+++|+.+.+..+++++|+.
T Consensus        99 ~~~~~~~~~l~~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~-~i~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~dvi~~  175 (496)
T 3qz1_A           99 KLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTRSSMEP-WVDQLTQEFCERMRV--QAGAPVTIQKEFSLLTCSIICY  175 (496)
T ss_dssp             TTSCTTCCCSSSSCCSHHHHHHHHHHHHHHHC--CCCHHH-HHHHHHHHHHHHHHT--TCSCCCHHHHHHTHHHHHHTTT
T ss_pred             HHhcCCCCceEECCCCHHHHHHHHHHHHHHhhccHhhHHH-HHHHHHHHHHHHHHh--cCCCccCHHHHHHHHHHHHHHH
Confidence            2122344 788888 9999999999999999777677774 899999999999976  4577899999999999999999


Q ss_pred             hccCCCCCCccCCCchhchHHHhHhHHHHHHHH--HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhhh-
Q 012990          188 VAFGVELDSVCGSNEEGTRFSSAFDDASAMTLW--RYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMH-  264 (452)
Q Consensus       188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-  264 (452)
                      ++||. .     .+.....+.+.+.........  .....+.++.++++....+++.+..+.+.+++.+.++++++..+ 
T Consensus       176 ~~fG~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  249 (496)
T 3qz1_A          176 LTFGN-K-----EDTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPNPGLWRLKQAIENRDHMVEKQLRRHKESMVA  249 (496)
T ss_dssp             TSTTC-C-----CHHHHHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHSCCS
T ss_pred             HhcCC-C-----CChHHHHHHHHHHHHHHHhccchhHHHHhHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence            99998 1     111123333333332211110  11111112222333344566777788888888888887764310 


Q ss_pred             ----h----h-----------------------------Hhh---------h----h------HHHHHHHHHHHhCCCcc
Q 012990          265 ----D----F-----------------------------QEE---------Y----T------SEKIVQEVKEATGAKDI  288 (452)
Q Consensus       265 ----~----l-----------------------------~~~---------~----l------~~~l~~Ei~~~~~~~~~  288 (452)
                          +    +                             +++         |    |      |+++++|++++++.+..
T Consensus       250 ~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~  329 (496)
T 3qz1_A          250 GQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGAS  329 (496)
T ss_dssp             SCCSSSHHHHTTSSTTCCC-----CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCSSSS
T ss_pred             CCccchHHHHHHHHHhccccCCcccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCcc
Confidence                0    0                             111         1    1      99999999999986310


Q ss_pred             hhhhhhccCCCHHHHhhcHHHHHHHHHhhcCCCCCCC-CccccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCCC
Q 012990          289 SDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPV-DAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAE  367 (452)
Q Consensus       289 ~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~  367 (452)
                      .     ...+ ++++.+|||++|||+|+||++|+++. ..|.+.+|+++ +||.|||||.|.++.+++|+||++| +||+
T Consensus       330 ~-----~~~~-~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~  401 (496)
T 3qz1_A          330 C-----SRVT-YKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSI-FGYDIPEGMVVIPNLQGAHLDETVW-EQPH  401 (496)
T ss_dssp             S-----SCCS-TTGGGSCHHHHHHHHHHHHHSCSSSSCCCEECSSCEEC-SSSEECTTCEEEECHHHHTTCTTTS-SSTT
T ss_pred             c-----CCCC-hhhhhcCcHHHHHHHHHHHhcCCcccccCccCCCCceE-CCEEeCCCCEEEechHHhhCChhhc-CCcc
Confidence            0     0225 88999999999999999999999997 56888888776 9999999999999999999999999 9999


Q ss_pred             CCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcceeEEEecCCc--ccccc--ceeeEecCC
Q 012990          368 EFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSE--TVNYR--TMINLHIDG  443 (452)
Q Consensus       368 ~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~--~~~~~--~~~~~~~~~  443 (452)
                      +|+||||++++.      ...++|||.|+|.|+|++||++|+++++++|+++|+|++.+++.  +.+..  .+++..|. 
T Consensus       402 ~F~PeR~l~~~~------~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-  474 (496)
T 3qz1_A          402 EFRPDRFLEPGA------NPSALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGALPSLQPDPYCGVNLKVQ-  474 (496)
T ss_dssp             SCCCCCCC---C------CCCCCSSCCSSSSCSSHHHHHHHHHHHHHHHHHHCCCCCCTTCCCCCSCCSCCCSSCCCCC-
T ss_pred             cCCcccccCCCC------CcCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhcEEeCCCCCCCCCCCcccCcceEecCC-
Confidence            999999997541      23799999999999999999999999999999999999875432  22222  35666665 


Q ss_pred             ceeEEEeeC
Q 012990          444 GLHVRVFHR  452 (452)
Q Consensus       444 ~~~v~~~~r  452 (452)
                      +++|++++|
T Consensus       475 ~~~v~~~~R  483 (496)
T 3qz1_A          475 PFQVRLQPR  483 (496)
T ss_dssp             CCCCCCCCC
T ss_pred             ceEEEEEEe
Confidence            899999887


No 18 
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00  E-value=2.3e-60  Score=451.96  Aligned_cols=389  Identities=18%  Similarity=0.269  Sum_probs=304.2

Q ss_pred             cCCCC-CCCCCcccchHHhhhhhhhHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccCCCCcchHHHH
Q 012990           33 SGNKQ-KKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSIL  110 (452)
Q Consensus        33 ~~~pg-P~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~  110 (452)
                      +.||| |+++|++||++.+.   ..++.++.+++++|| +|++++++.+.|+|++++.+++++.++...+.+...+....
T Consensus        11 ~~PPg~P~~lP~iG~l~~~~---~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~~   87 (461)
T 3i3k_A           11 KSPPYIFSPIPFLGHAIAFG---KSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLT   87 (461)
T ss_dssp             CCCCBCCCSSTTTBTHHHHH---HCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHH
T ss_pred             CCCCCCCCCCCccccHHhhc---cCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHHHhh
Confidence            78999 88999999999884   347899999999999 68889999999999999999999988766666655555455


Q ss_pred             HHhcCCeeEec-CchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHHHHhHHHHhhhc
Q 012990          111 KDLLGDGIFTV-DGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVA  189 (452)
Q Consensus       111 ~~~~g~~i~~~-~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~  189 (452)
                      ..++|.+++.. +|+.|+++|+++.++|+...++.+.+ .++++++++++.+.+    +..+|+.+.+..++.++++.++
T Consensus        88 ~~~~g~g~~~~~~g~~w~~~Rr~~~~~f~~~~l~~~~~-~~~~~~~~ll~~l~~----~~~~dl~~~~~~~~~~~~~~~~  162 (461)
T 3i3k_A           88 TPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQHVS-IIEKETKEYFESWGE----SGEKNVFEALSELIILTASHCL  162 (461)
T ss_dssp             HHHHCTTSGGGSCHHHHHHHHHHHHHHSSHHHHHHHHH-HHHHHHHHHGGGGCS----EEEEEHHHHHHHHHHHHHHHHH
T ss_pred             hhhcCCeeeeCCCcHHHHHHHHHHhhhhCHHHHHHHHH-HHHHHHHHHHHHhhh----cCCcCHHHHHHHHHHHHHHHHH
Confidence            56678887665 79999999999999999999999985 888888888877642    3458999999999999999999


Q ss_pred             cCCCCCCccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhhh---h-
Q 012990          190 FGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMH---D-  265 (452)
Q Consensus       190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~-  265 (452)
                      ||.++....  .   ..+.+.+..+....    ....+.+..+++....++..++.+.+.+++.+.++++++..+   + 
T Consensus       163 ~G~~~~~~~--~---~~~~~~~~~~~~~~----~~~~~~~P~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  233 (461)
T 3i3k_A          163 HGKEIRSQL--N---EKVAQLYADLDGGF----SHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQEKIDDI  233 (461)
T ss_dssp             TCHHHHHTC--C---HHHHHHHHHHHTTS----SHHHHHSCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCSH
T ss_pred             ccHhhhhHH--H---HHHHHHHHHHHhcc----ccchhhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccH
Confidence            997764321  1   22222222221110    000011122333344566677788888888888888764321   1 


Q ss_pred             ---h------------------------Hhh---------hh----------HHHHHHHHHHHhCCCcchhhhhhccCCC
Q 012990          266 ---F------------------------QEE---------YT----------SEKIVQEVKEATGAKDISDFLKVAGCIS  299 (452)
Q Consensus       266 ---l------------------------~~~---------~l----------~~~l~~Ei~~~~~~~~~~~~~~~~~~~~  299 (452)
                         +                        +++         |+          |+++++|++++++.+.        ..++
T Consensus       234 l~~ll~~~~~~~~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~--------~~~~  305 (461)
T 3i3k_A          234 LQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENL--------PPLT  305 (461)
T ss_dssp             HHHHHTCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTC--------CCCC
T ss_pred             HHHHHHhhhccCCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCCC--------CCCC
Confidence               0                        111         11          9999999999998653        2358


Q ss_pred             HHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCC
Q 012990          300 EEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENG  379 (452)
Q Consensus       300 ~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~  379 (452)
                      .+++.+|||++|||+|+||++|+++...|.+.+|+++ +||.|||||.|+++.+++|+||++| +||++|+||||+++++
T Consensus       306 ~~~~~~l~~l~a~i~E~lRl~p~~~~~~r~~~~d~~~-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~Rfl~~~~  383 (461)
T 3i3k_A          306 YDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTV-AGYTIPPGHQVCVSPTVNQRLKDSW-VERLDFNPDRYLQDNP  383 (461)
T ss_dssp             HHHHHTCHHHHHHHHHHHHHSCSCCCEEEEECSCEEE-TTEEECTTCEEEECHHHHTTCTTTC-TTTTCCCGGGGGSCCH
T ss_pred             HHHHhcChHHHHHHHHHHhcCCCccccccccCCCccC-CCEEECCCCEEEEChHHhcCCcccC-CCcccCCCCCCCCCCC
Confidence            9999999999999999999999998888888888887 9999999999999999999999999 9999999999997643


Q ss_pred             CcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcceeEEEecCCccccccceeeEecCCceeEEEe
Q 012990          380 IFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSETVNYRTMINLHIDGGLHVRVF  450 (452)
Q Consensus       380 ~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  450 (452)
                      ..  .....|+|||+|+|.|+|++||++|++++++.||++|+|++.++..+......+++.|.+++.++-.
T Consensus       384 ~~--~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  452 (461)
T 3i3k_A          384 AS--GEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHTPENPVIRYKR  452 (461)
T ss_dssp             HH--HSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBCCSSSSCCBSSCEEEEEE
T ss_pred             CC--CCCcceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeEEeCCCCCCCcccceeecCCCCceEEeec
Confidence            21  2356799999999999999999999999999999999999977542222234566788888877643


No 19 
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00  E-value=1.3e-60  Score=452.05  Aligned_cols=388  Identities=17%  Similarity=0.247  Sum_probs=273.2

Q ss_pred             cCCCC-CCCCCcccchHHhhhhhhhHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccCCCCcchHHHH
Q 012990           33 SGNKQ-KKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSIL  110 (452)
Q Consensus        33 ~~~pg-P~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~  110 (452)
                      +.||| |+++|++|++..+.   .+++.++.+++++|| +|.+.+++.++++|+||+++++|+.++...|++++.+ ...
T Consensus         4 ~~PPg~p~~~P~iG~~~~~~---~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~-~~~   79 (455)
T 2cib_A            4 VALPRVSGGHDEHGHLEEFR---TDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAY-PFM   79 (455)
T ss_dssp             -CCCBCSCCCBTTBTHHHHT---TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSC-GGG
T ss_pred             CCCCCCCCCCCCccCHHHHh---hChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccch-hHH
Confidence            57898 88999999998874   347889999999998 5777888888999999999999998765566665443 223


Q ss_pred             HHhcCCeeEecCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHHHHhHHHHhhhcc
Q 012990          111 KDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAF  190 (452)
Q Consensus       111 ~~~~g~~i~~~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~f  190 (452)
                      ...+|.+++ .+|+.|+++|++++++|+.++++.+.+ .+++.++.+++.+.    .+..+|+.+.+..+++++++.++|
T Consensus        80 ~~~~g~~~~-~~~~~~~~~R~~~~~~f~~~~l~~~~~-~i~~~~~~l~~~~~----~~~~vd~~~~~~~~~~~vi~~~~f  153 (455)
T 2cib_A           80 TPIFGEGVV-FDASPERRKEMLHNAALRGEQMKGHAA-TIEDQVRRMIADWG----EAGEIDLLDFFAELTIYTSSACLI  153 (455)
T ss_dssp             HHHHC---------------------CCHHHHHHHHH-HHHHHHHHHHTTCC----SEEEEEHHHHHHHHHHHHHHHHHT
T ss_pred             HhhcCCccc-cCcHHHHHHHhhhccccCHHHHHHHHH-HHHHHHHHHHHHhC----CCCcEeHHHHHHHHHHHHHHHHHc
Confidence            344565554 589999999999999999999999985 88889999988763    235799999999999999999999


Q ss_pred             CCCCCCccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhhh------
Q 012990          191 GVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMH------  264 (452)
Q Consensus       191 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------  264 (452)
                      |.+++...+     ..+.+.+..+.....  ....+   ..+++....++..++.+.+.+++...++++++...      
T Consensus       154 G~~~~~~~~-----~~~~~~~~~~~~~~~--~~~~~---~p~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~  223 (455)
T 2cib_A          154 GKKFRDQLD-----GRFAKLYHELERGTD--PLAYV---DPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKSDR  223 (455)
T ss_dssp             CHHHHTTCC-----HHHHHHHHHHHTTCC--GGGGT---CTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CC
T ss_pred             CCCcchhhh-----HHHHHHHHHHHhhhh--HHHHh---cccCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcc
Confidence            988754221     234444333321100  00000   00122122233445555566666666665542110      


Q ss_pred             h---------------------h--------Hhh---------h----h------HHHHHHHHHHHhCCCcchhhhhhcc
Q 012990          265 D---------------------F--------QEE---------Y----T------SEKIVQEVKEATGAKDISDFLKVAG  296 (452)
Q Consensus       265 ~---------------------l--------~~~---------~----l------~~~l~~Ei~~~~~~~~~~~~~~~~~  296 (452)
                      +                     +        +++         |    |      |++|++||+++++.+.         
T Consensus       224 dll~~ll~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~---------  294 (455)
T 2cib_A          224 DMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGR---------  294 (455)
T ss_dssp             CHHHHHHHCBCTTSSBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGCC---------
T ss_pred             cHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCC---------
Confidence            1                     0        111         1    1      9999999999987642         


Q ss_pred             CCCHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCC
Q 012990          297 CISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLD  376 (452)
Q Consensus       297 ~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~  376 (452)
                      .++++++.+|||++|||+|+||++|+++...|.+.+|+++ +||.|||||.|.++.+++|+||++| +||++|+||||++
T Consensus       295 ~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~l~  372 (455)
T 2cib_A          295 SVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEV-QGHRIHEGDLVAASPAISNRIPEDF-PDPHDFVPARYEQ  372 (455)
T ss_dssp             CHHHHTTSCCHHHHHHHHHHHHHSCSCCCEEEEECSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCGGGGST
T ss_pred             CCCHHHHhcCHHHHHHHHHHHhcCCcccccceeeCCCceE-CCEEECCCCEEEEChHHhcCCcccC-CCccccCcccCCC
Confidence            2478999999999999999999999999888999888887 9999999999999999999999999 9999999999997


Q ss_pred             CCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcceeEEEecCCcccc-ccceeeEecCCceeEEEeeC
Q 012990          377 ENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSETVN-YRTMINLHIDGGLHVRVFHR  452 (452)
Q Consensus       377 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~r  452 (452)
                      ++.... ..+..|+|||+|+|.|+|++||++|+++++++||++|+|++..+..+.. ...+.+..|..+++|++++|
T Consensus       373 ~~~~~~-~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R  448 (455)
T 2cib_A          373 PRQEDL-LNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAAVRYRRR  448 (455)
T ss_dssp             TTCHHH-HCTTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCEECSSSSCEECSCCEEEEEEC
T ss_pred             CCcccc-cCCccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCccccccccccccccCCCCceEEEEEC
Confidence            543211 1256799999999999999999999999999999999999864222221 11345667777899999987


No 20 
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00  E-value=9.5e-61  Score=454.91  Aligned_cols=386  Identities=22%  Similarity=0.320  Sum_probs=274.3

Q ss_pred             ccCCCCCCCCCcccchHHhhhhhhhHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccC-CCCcchHHH
Q 012990           32 KSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNY-GKGSYNYSI  109 (452)
Q Consensus        32 ~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~-~~~~~~~~~  109 (452)
                      +..||||+++|++|+++.+..   +++.++.++++ || ++++++++.++++|+||+.+++|+.++  .| .+.+.+ ..
T Consensus        22 ~eppPgP~~~P~iG~~~~~~~---~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~-~~   94 (467)
T 3dbg_A           22 REPPVAGGGVPLLGHGWRLAR---DPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLW-ES   94 (467)
T ss_dssp             CBCCEECCCCSTTHHHHHHHH---CHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC----------
T ss_pred             CCCCCCCCCCCcccchHHhcc---CHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchH-HH
Confidence            467899999999999999854   47888999988 98 578888889999999999999999876  55 333332 34


Q ss_pred             HHHhcC-CeeEecCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHHHHhHHHHhhh
Q 012990          110 LKDLLG-DGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKV  188 (452)
Q Consensus       110 ~~~~~g-~~i~~~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~  188 (452)
                      +....| .++++.+|+.|+++|++++++|+.+.++.+.+ .+++.++++++.+.    .+.++|+.+.+..+++++++.+
T Consensus        95 ~~~~~g~~~l~~~dg~~h~~~R~~l~~~fs~~~l~~~~~-~i~~~~~~l~~~l~----~~~~~d~~~~~~~~~~~vi~~~  169 (467)
T 3dbg_A           95 LEGLLGKEGVATANGPLHRRQRRTIQPAFRLDAIPAYGP-IMEEEAHALTERWQ----PGKTVDATSESFRVAVRVAARC  169 (467)
T ss_dssp             ---------------------CGGGHHHHSTTTSTTTHH-HHHHHHHHHHHHSC----TTSCEEHHHHHHHHHHHHHHHH
T ss_pred             HHHhcCCCCcccCCcHHHHHHHHHhhhhhCHHHHHHHHH-HHHHHHHHHHHHhc----cCCcCcHHHHHHHHHHHHHHHH
Confidence            445566 78888999999999999999999999999985 88999999998874    3668999999999999999999


Q ss_pred             ccCCCCCCccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhhh---h
Q 012990          189 AFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMH---D  265 (452)
Q Consensus       189 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~  265 (452)
                      +||.+++..     ....+.+.+.............++. +..+++....++..++.+.+.+++...+++++++..   +
T Consensus       170 ~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~d  243 (467)
T 3dbg_A          170 LLRGQYMDE-----RAERLCVALATVFRGMYRRMVVPLG-PLYRLPLPANRRFNDALADLHLLVDEIIAERRASGQKPDD  243 (467)
T ss_dssp             HSCSSCCHH-----HHHHHHHHHHHHHHC-------------------------CCHHHHHHHHHHHHHHHTTCCSSCCS
T ss_pred             HhCCcccch-----hHHHHHHHHHHHHHHHHHHhccchh-hhhhCCChHhHHHHHHHHHHHHHHHHHHHHHHhcCCCchH
Confidence            999887631     1234444444443322222222211 112233333445566667777888888877654211   1


Q ss_pred             ----------------------------hHhh---------hh----------HHHHHHHHHHHhCCCcchhhhhhccCC
Q 012990          266 ----------------------------FQEE---------YT----------SEKIVQEVKEATGAKDISDFLKVAGCI  298 (452)
Q Consensus       266 ----------------------------l~~~---------~l----------~~~l~~Ei~~~~~~~~~~~~~~~~~~~  298 (452)
                                                  ++++         |.          |++|++|++.+.+...          +
T Consensus       244 ll~~ll~~~~~~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~----------~  313 (467)
T 3dbg_A          244 LLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGGRP----------V  313 (467)
T ss_dssp             HHHHHTTC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTSC----------C
T ss_pred             HHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCC----------C
Confidence                                        0111         11          9999999999987642          5


Q ss_pred             CHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCC
Q 012990          299 SEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDEN  378 (452)
Q Consensus       299 ~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~  378 (452)
                      +++++.+|||++|||+|+||++|+++...|++.+|+++ +||.|||||.|.++.+++|+||++| +||++||||||++++
T Consensus       314 ~~~~l~~l~yl~a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeRfl~~~  391 (467)
T 3dbg_A          314 AFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESEL-GGYRIPAGADIIYSPYAIQRDPKSY-DDNLEFDPDRWLPER  391 (467)
T ss_dssp             CHHHHTTCHHHHHHHHHHHHHSCSCCCEEEECSSCEEE-TTEEECTTCEEEECHHHHHTCTTTC-TTTTCCCGGGGSHHH
T ss_pred             CHHHHhhCHHHHHHHHHHhhcCCCccccceeeCCCccC-CCEEECCCCEEEEChHHhcCCchhc-CCccccCCccCCCCc
Confidence            99999999999999999999999999889999888887 9999999999999999999999999 999999999999643


Q ss_pred             CCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcceeEEEecCCccccccceeeEecCCceeEEEee
Q 012990          379 GIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSETVNYRTMINLHIDGGLHVRVFH  451 (452)
Q Consensus       379 ~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  451 (452)
                      ..  ......|+|||+|+|.|+|++||++|+++++++|+++|+|++.++. +.....+.+++|. ++.++-..
T Consensus       392 ~~--~~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~~p~-~l~~~~~~  460 (467)
T 3dbg_A          392 AA--NVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGS-NDAVRVGITLRPH-DLLVRPVA  460 (467)
T ss_dssp             HT--TSCTTSCCSSCSSSSSCTTHHHHHHHHHHHHHHHHHHEEEEECTTC-EEEEEESSSEEEE-ECEEEEEE
T ss_pred             cc--cCCCccccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceeEeCCCC-CCccceeeEecCC-CCccchhh
Confidence            21  1245679999999999999999999999999999999999998754 4455567777776 56665443


No 21 
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00  E-value=4.8e-59  Score=442.38  Aligned_cols=372  Identities=24%  Similarity=0.408  Sum_probs=290.4

Q ss_pred             hhHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccCCCCcchHHHHHH-----hcCCeeEe-cCchhHH
Q 012990           55 NRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKD-----LLGDGIFT-VDGEKWR  127 (452)
Q Consensus        55 ~~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~-----~~g~~i~~-~~g~~w~  127 (452)
                      ..++..+.+|+++|| +|+++.++.+.|+++||+++++|+.+  ..|.+.+........     .+|.++++ .+|+.|+
T Consensus        10 ~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~   87 (456)
T 3mdm_A           10 RVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMS--TKYNKDSKMYRALQTVFGERLFGQGLVSECNYERWH   87 (456)
T ss_dssp             CCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTC--TTSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHHH
T ss_pred             chHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhh--ccccccchhHHHHHHhhcccccCCCcccCCChHHHH
Confidence            347888999999999 58888899999999999999999975  356665544433322     23566665 4899999


Q ss_pred             HhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHHHHhHHHHhhhccCCCCCCccCCCchhchH
Q 012990          128 EQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRF  207 (452)
Q Consensus       128 ~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~  207 (452)
                      ++|++++++|+.++++.+.+ .+++.++.+++.+.+..+++.++|+.+.+..+++++++.++||.+++...+..   ..+
T Consensus        88 ~~Rr~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~---~~~  163 (456)
T 3mdm_A           88 KQRRVIDLAFSRSSLVSLME-TFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQ---KPL  163 (456)
T ss_dssp             HHHHHHGGGGSHHHHHTTHH-HHHHHHHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGTCC---HHH
T ss_pred             HHHhhcccccCHHHHHHHHH-HHHHHHHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcccc---cHH
Confidence            99999999999999999985 88999999999998765667799999999999999999999999988755433   334


Q ss_pred             HHhHhHHHHHHHHHHHHHHHHHHHHhccc--hHHHHHHHHHHHHHHHHHHHHHHHhhhh-------hh------------
Q 012990          208 SSAFDDASAMTLWRYVDIFWKIKKLLNIG--SEARLKQRIEVIDTFVYKIIRKKTDQMH-------DF------------  266 (452)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------~l------------  266 (452)
                      .+.+.......... .   .++..+++..  ..+...++.+.+.+++...++++++...       ++            
T Consensus       164 ~~~~~~~~~~~~~~-~---~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~~~~~  239 (456)
T 3mdm_A          164 SQAVKLMLEGITAS-R---NTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEEGAQ  239 (456)
T ss_dssp             HHHHHHHHHHHHHH-H---HSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHHTSSCS
T ss_pred             HHHHHHHHHHHHHH-H---HHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHHHHhcCCCC
Confidence            44444333322111 0   1111222211  1233445555666666666666543211       10            


Q ss_pred             -------------Hhh---------h----h------HHHHHHHHHHHhCCCcchhhhhhccCCCHHHHhhcHHHHHHHH
Q 012990          267 -------------QEE---------Y----T------SEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAIT  314 (452)
Q Consensus       267 -------------~~~---------~----l------~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~  314 (452)
                                   +++         |    |      |++|++|++++++.+.         .++.+++.+||||+|||+
T Consensus       240 ~~~~l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~---------~~~~~~l~~lpyl~a~i~  310 (456)
T 3mdm_A          240 DDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKR---------YLDFEDLGRLQYLSQVLK  310 (456)
T ss_dssp             SSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCS---------SCCHHHHHHCHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCC---------CCCHHHHhcCHHHHHHHH
Confidence                         111         1    1      9999999999998653         369999999999999999


Q ss_pred             HhhcCCCCCCCCccccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccC
Q 012990          315 ETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQA  394 (452)
Q Consensus       315 E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~  394 (452)
                      |+||++|+++...|++.+|+++ +||.|||||.|.++.+++|+||++| +||++|+||||+++..    .....|+|||.
T Consensus       311 E~lRl~p~~~~~~r~~~~d~~i-~g~~Ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~PeRfl~~~~----~~~~~~~pFg~  384 (456)
T 3mdm_A          311 ESLRLYPPAWGTFRLLEEETLI-DGVRVPGNTPLLFSTYVMGRMDTYF-EDPLTFNPDRFGPGAP----KPRFTYFPFSL  384 (456)
T ss_dssp             HHHHHCCSSCCEEEEECSCEEE-TTEEECSSEEEEECHHHHHTCTTTS-SSTTSCCGGGGSTTSC----CCSSSCCTTCC
T ss_pred             HHHHhCCCccccccccCCceeE-CCEEECCCCEEEeehHHhcCCchhc-CCccccCccccCCCCC----CCCCcccCCCC
Confidence            9999999999888988888776 9999999999999999999999999 9999999999997542    23567999999


Q ss_pred             CCCCCcchHHHHHHHHHHHHHhhcceeEEEecCCccccccceeeEecCCceeEEEeeC
Q 012990          395 GPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSETVNYRTMINLHIDGGLHVRVFHR  452 (452)
Q Consensus       395 G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  452 (452)
                      |+|.|+|++||++|+++++++||++|+|++.++. ++......++.|.+++++++++|
T Consensus       385 G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~r  441 (456)
T 3mdm_A          385 GHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQ-RFGLQEQATLKPLDPVLCTLRPR  441 (456)
T ss_dssp             GGGSCTTHHHHHHHHHHHHHHHHHHEEEEECTTC-CCCEEESSSEEESSCCEEEEEEC
T ss_pred             CCcCCCCHHHHHHHHHHHHHHHHHhCeEEeCCCC-cceeecceEEecCCCeEEEEEEc
Confidence            9999999999999999999999999999998753 45555667889999999999987


No 22 
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00  E-value=4e-60  Score=449.43  Aligned_cols=385  Identities=15%  Similarity=0.221  Sum_probs=299.1

Q ss_pred             ccCCCCCCC-CCcccchHHhhhhhhhHHHHHHHHHHhhC-C-eEEecCCceeEEecChhhHHHHHhcccccCCCCcchHH
Q 012990           32 KSGNKQKKY-HPIGGTVFNQLLNFNRLHHYMTDLAAKHG-T-YRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYS  108 (452)
Q Consensus        32 ~~~~pgP~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~-~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~  108 (452)
                      ++.||||++ +|++||++.+..   .++.++.+++++|| + |++++++.++|+++||+++++++.++...|++++... 
T Consensus         2 ~~~PPg~p~~~P~iG~~~~~~~---~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~-   77 (450)
T 3gw9_A            2 GKLPPVYPVTVPILGHIIQFGK---SPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYS-   77 (450)
T ss_dssp             CSCCCBCCCCSTTTBTHHHHHH---CHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGG-
T ss_pred             CCCCCCCCCCcchhccHHHHcc---CHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHH-
Confidence            468999665 999999998843   47889999999998 5 8888999999999999999999988767777765443 


Q ss_pred             HHHHhcCCeeEe-cCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHH-HHHHHhCCCCcccHHHhHHHHhHHHHh
Q 012990          109 ILKDLLGDGIFT-VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQ-LLSEAANSDKILDIQDLFMKSTLDSIF  186 (452)
Q Consensus       109 ~~~~~~g~~i~~-~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~d~~~~~~~~~~~~i~  186 (452)
                      .+...+|.++++ .+++.|+++|++++++|+.+.++.+.+ .++++++++++ .+.+   .+..+|+.+.+..+++++++
T Consensus        78 ~~~~~~g~~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~-~i~~~~~~ll~~~~~~---~~~~vd~~~~~~~~~~~~i~  153 (450)
T 3gw9_A           78 FMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVP-AIQHEVRKFMAANWDK---DEGEINLLEDCSTMIINTAC  153 (450)
T ss_dssp             GGHHHHCTTSGGGSCHHHHHHHHHHHHHTTSGGGCTTHHH-HHHHHHHHHHHHHSCS---SEEEEEHHHHHHHHHHHHHH
T ss_pred             HHHHHhcCCcccCCCcHHHHHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHhcc---CCCcccHHHHHHHHHHHHHH
Confidence            445667877665 579999999999999999999999985 88888888887 5532   45579999999999999999


Q ss_pred             hhccCCCCCCccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhh---
Q 012990          187 KVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM---  263 (452)
Q Consensus       187 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---  263 (452)
                      .++||.+++...+    ...+.+.+........  ....+.++..+++....++..++.+.+.+++...++++++..   
T Consensus       154 ~~~fG~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~  227 (450)
T 3gw9_A          154 QCLFGEDLRKRLD----ARRFAQLLAKMESSLI--PAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVNK  227 (450)
T ss_dssp             HHHSCHHHHHHSC----HHHHHHHHHHHHHTCC--GGGGTCGGGGGSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHcCcchhhhhh----hHHHHHHHHHHHhccc--cchhcccchhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            9999988754321    1334444433322110  000111122334434455666777788888888887766432   


Q ss_pred             ----hhh----------------------------Hhh---------hh------------HHHHHHHHHHHhCCCcchh
Q 012990          264 ----HDF----------------------------QEE---------YT------------SEKIVQEVKEATGAKDISD  290 (452)
Q Consensus       264 ----~~l----------------------------~~~---------~l------------~~~l~~Ei~~~~~~~~~~~  290 (452)
                          .++                            +++         |.            |+++++|++++ +.     
T Consensus       228 ~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l~~Ei~~~-~~-----  301 (450)
T 3gw9_A          228 DSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEF-PA-----  301 (450)
T ss_dssp             SCCCCSHHHHHHHCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHTTC-CS-----
T ss_pred             CCccchHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHHHHHHHhc-cC-----
Confidence                010                            111         11            88999999887 22     


Q ss_pred             hhhhccCCCHHHH-hhcHHHHHHHHHhhcCCCCCCCCccccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCCCCC
Q 012990          291 FLKVAGCISEEAL-EKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEF  369 (452)
Q Consensus       291 ~~~~~~~~~~~~~-~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F  369 (452)
                            .++.+++ .+|||++|||+|+||++|+++...|.+.+|+++ +||.|||||.|.++.+++|+||++| +||++|
T Consensus       302 ------~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F  373 (450)
T 3gw9_A          302 ------QLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKV-GSYVVPKGDIIACSPLLSHHDEEAF-PEPRRW  373 (450)
T ss_dssp             ------SCCHHHHHHHCHHHHHHHHHHHHHSCSCCCEEEEECSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSC
T ss_pred             ------CCChHHHHHhcHHHHHHHHHHHHhCCchhcccccccccccc-CCEEECCCCEEEEChHHhhCChhhc-CCcccc
Confidence                  2589999 999999999999999999999888999988887 9999999999999999999999999 999999


Q ss_pred             CCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcceeEEEecCCccccccceeeEecC-CceeEE
Q 012990          370 KPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSETVNYRTMINLHID-GGLHVR  448 (452)
Q Consensus       370 ~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~v~  448 (452)
                      +|||+..        .+..|+|||.|+|.|+|++||++|+++++++||++|+|++.++..+......++..|. .+++|+
T Consensus       374 ~PeR~~~--------~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~v~  445 (450)
T 3gw9_A          374 DPERDEK--------VEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTMVVGPTASQCRVK  445 (450)
T ss_dssp             CTTCCCS--------STTCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHEEEEESSSSCCCEETTSSSCEECGGGCEEE
T ss_pred             CCCcCcC--------CCCceeCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEecCCCCCCCccccceecCCCCceEeE
Confidence            9999321        2567999999999999999999999999999999999999854322212235667777 799999


Q ss_pred             EeeC
Q 012990          449 VFHR  452 (452)
Q Consensus       449 ~~~r  452 (452)
                      +++|
T Consensus       446 ~~~R  449 (450)
T 3gw9_A          446 YIRR  449 (450)
T ss_dssp             EEEC
T ss_pred             eeec
Confidence            9987


No 23 
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00  E-value=1.1e-56  Score=430.35  Aligned_cols=408  Identities=16%  Similarity=0.204  Sum_probs=276.6

Q ss_pred             cccccCCCCCCC-CCcccchHHhhhhhhhHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccCCCCcch
Q 012990           29 LTQKSGNKQKKY-HPIGGTVFNQLLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYN  106 (452)
Q Consensus        29 ~~~~~~~pgP~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~  106 (452)
                      +..++.||||++ +|++|+++.+..   .++.++.+++++|| +|.+++++.++|+++||+++++|+.+.. .+...+..
T Consensus         9 ~~~~~~pPgp~~~~P~iG~~~~~~~---~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~-~~~~~~~~   84 (491)
T 3dax_A            9 RRQTGEPPLENGLIPYLGCALQFGA---NPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGK-YFDWKKFH   84 (491)
T ss_dssp             CCCTTCCCEEEEEESCTTTTGGGTC---CHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCT-TEESSHHH
T ss_pred             ccCCCCCCcCCCcccchhhHHHHhh---CHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCc-cCChHHHH
Confidence            334478999988 899999988743   47889999999999 5888999999999999999999997653 23333333


Q ss_pred             HHHHHHhcCCeeE-ecCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHH---hCCCCcccHHHhHHHHhH
Q 012990          107 YSILKDLLGDGIF-TVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEA---ANSDKILDIQDLFMKSTL  182 (452)
Q Consensus       107 ~~~~~~~~g~~i~-~~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~d~~~~~~~~~~  182 (452)
                      ...+...+|.+++ ..+|+.|+++|+.+.++|+...+..+.+ .+.+.+..+++.....   ......+++...+..+++
T Consensus        85 ~~~~~~~~g~~~~~~~~g~~w~~~r~~~~~~f~~~~l~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~i~  163 (491)
T 3dax_A           85 FATSAKAFGHRSIDPMDGNTTENINDTFIKTLQGHALNSLTE-SMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMF  163 (491)
T ss_dssp             HHHHHHHHTCCCCCGGGTSBCCCHHHHHHHHHSHHHHHHHHH-HHHHHHHHHHC----------CCEEEEHHHHHHHHHH
T ss_pred             HHHHHHHcCCCcccccchhHHHHHHHHHHHhcCcccHHHHHH-HHHHHHHHHHHhhccCCcCCCCceeccHHHHHHHHHH
Confidence            3344455677766 6788999999999999999999988875 4555555554443221   122346889999999999


Q ss_pred             HHHhhhccCCCCCCccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHH-------------
Q 012990          183 DSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVID-------------  249 (452)
Q Consensus       183 ~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------  249 (452)
                      ++++.++||.+.+..+.   ....+.+.+..+.     .....++.+...++....++..+..+.+.             
T Consensus       164 ~~~~~~~fG~~~~~~~~---~~~~~~~~~~~~~-----~~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (491)
T 3dax_A          164 EAGYLTIFGRDLTRRDT---QKAHILNNLDNFK-----QFDKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKRES  235 (491)
T ss_dssp             HHHHHHHHCBCSTTGGG---HHHHHHHHHHHHH-----HHHHHHHHHHTTCCGGGSHHHHHHHHHHHHHTSHHHHTTCBS
T ss_pred             HHhHHHHcCcccccccc---hhhhhhHHHHHHH-----HHHHHhHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHhhcccc
Confidence            99999999987654211   1111111111111     11111122222222221222222222221             


Q ss_pred             --HHHHHHHHHHHhh----hhh--------hHhh---------hh----------HHHHHHHHHHHhCCCcchhh-hhhc
Q 012990          250 --TFVYKIIRKKTDQ----MHD--------FQEE---------YT----------SEKIVQEVKEATGAKDISDF-LKVA  295 (452)
Q Consensus       250 --~~~~~~i~~~~~~----~~~--------l~~~---------~l----------~~~l~~Ei~~~~~~~~~~~~-~~~~  295 (452)
                        ++++.+++...+.    .+.        ++++         |+          |+++++||+++++.+..... .+..
T Consensus       236 ~~d~l~~ll~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~~~~~~  315 (491)
T 3dax_A          236 ISELISLRMFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNP  315 (491)
T ss_dssp             CCHHHHHHHHHHHHHBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHTTTCCCCSSSCC
T ss_pred             hhHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhccccccccCCCc
Confidence              3333333221110    001        1111         21          99999999999875421000 0000


Q ss_pred             cCCCHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccC---CCeeecCCCEEEEehhhhcCCCCCccCCCCCCCCC
Q 012990          296 GCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLP---DGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPE  372 (452)
Q Consensus       296 ~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~---~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~  372 (452)
                      ..++++++.+||||+|||+|+||++|+ +...|.+.+|+++.   +||.|||||.|.++.+++|+||++| +||++|+||
T Consensus       316 ~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~~~R~~~~d~~l~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~Pe  393 (491)
T 3dax_A          316 ICLSQAELNDLPVLDSIIKESLRLSSA-SLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIY-PDPLTFKYD  393 (491)
T ss_dssp             CCCCHHHHHCCHHHHHHHHHHHHHHEE-ECEEEEESSSEEEEETTEEEEECTTCEEEECTHHHHTCTTTS-SSTTSCCTT
T ss_pred             cccCHHHHhcCHHHHHHHHHHHhcCCC-ccceeEecCCeEeecCCCcEEeCCCCEEEechHhhcCCcccC-CCHHHcCCc
Confidence            125899999999999999999999975 67788888887763   6899999999999999999999999 999999999


Q ss_pred             CCCCCCCCcc-------cCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcceeEEEecCCc-cc--ccc-ce-eeEe
Q 012990          373 RWLDENGIFQ-------KESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSE-TV--NYR-TM-INLH  440 (452)
Q Consensus       373 R~l~~~~~~~-------~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~-~~--~~~-~~-~~~~  440 (452)
                      ||+++++...       ...+..|+|||+|+|.|+|++||++|+++++++||++|+|++.++.. ++  +.. .+ ++..
T Consensus       394 Rfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  473 (491)
T 3dax_A          394 RYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLGILP  473 (491)
T ss_dssp             TTBCTTSSBCCCCEETTEECSCSCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEETTTTCCCCCBCGGGTBEEECC
T ss_pred             cccCCCccccccccccCcCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHeeEEEccCCCCCCCCCcccccccccC
Confidence            9997543211       11356799999999999999999999999999999999999976531 22  221 23 3568


Q ss_pred             cCCceeEEEee
Q 012990          441 IDGGLHVRVFH  451 (452)
Q Consensus       441 ~~~~~~v~~~~  451 (452)
                      |..+++|+++.
T Consensus       474 p~~~~~~~~r~  484 (491)
T 3dax_A          474 PLNDIEFKYKF  484 (491)
T ss_dssp             BSSCCEEEEEE
T ss_pred             CCCCceEEEEe
Confidence            88888888875


No 24 
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00  E-value=5.8e-57  Score=431.78  Aligned_cols=408  Identities=16%  Similarity=0.225  Sum_probs=295.9

Q ss_pred             hcccccCCCCCCC-CCcccchHHhhhhhhhHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccCCCCcc
Q 012990           28 TLTQKSGNKQKKY-HPIGGTVFNQLLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSY  105 (452)
Q Consensus        28 ~~~~~~~~pgP~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~  105 (452)
                      ...+++.||||++ +|++||++.+.   .+++.++.+++++|| +|++.+++.++++|+||+++++|+.+. +.+.....
T Consensus         8 ~~~~~~~PPgp~~~lPliG~~~~~~---~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~-~~~~~~~~   83 (491)
T 3v8d_A            8 RRRQTGEPPLENGLIPYLGCALQFG---ANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHG-KYFDWKKF   83 (491)
T ss_dssp             CCCCTTSCCEEEEEESSTTTTGGGT---CCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCC-TTEESSHH
T ss_pred             hccCCCCCCCCCCCcceeccHHHHh---cCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcC-CccchHHH
Confidence            3444589999998 69999999984   458999999999999 588889999999999999999999765 33444444


Q ss_pred             hHHHHHHhcCCeeE-ecCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhC---CCCcccHHHhHHHHh
Q 012990          106 NYSILKDLLGDGIF-TVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAAN---SDKILDIQDLFMKST  181 (452)
Q Consensus       106 ~~~~~~~~~g~~i~-~~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~d~~~~~~~~~  181 (452)
                      ........+|.+.+ ..+|+.|+++|+.+.++|+.+.++.+.+ .+.+.+..+++.+.....   .+...++.+.+..++
T Consensus        84 ~~~~~~~~~g~~~~~~~~g~~~~~~Rr~~~~~f~~~~l~~~~~-~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~  162 (491)
T 3v8d_A           84 HFALSAKAFGHRSIDPMDGNTTENINDTFIKTLQGHALNSLTE-SMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVM  162 (491)
T ss_dssp             HHHHHHHHHTCCCCCGGGSSBCCCHHHHHHHHHSHHHHHHHHH-HHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHHH
T ss_pred             HHHHHHHhcCCcccccccchhHHHHHHHHHHHcCccchHHHHH-HHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHHH
Confidence            44455667776544 4589999999999999999999999985 788888888764322111   345789999999999


Q ss_pred             HHHHhhhccCCCCCCccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHh
Q 012990          182 LDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTD  261 (452)
Q Consensus       182 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  261 (452)
                      +++++..+||.+....+.   ....+.+.+..+.     .+...++.+...++....++..++.+++.+++...++++++
T Consensus       163 ~~~~~~~~fG~~~~~~~~---~~~~~~~~~~~~~-----~~~~~~~~l~~~~p~~~~~~~~~a~~~l~~~~~~~~~~~~~  234 (491)
T 3v8d_A          163 FEAGYLTIFGRDLTRRDT---QKAHILNNLDNFK-----QFDKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKRE  234 (491)
T ss_dssp             HHHHHHHHHCBCCSCGGG---HHHHHHHHHHHHH-----HHHHHHHHHHTTCCGGGCHHHHHHHHHHHHHTSHHHHTTCB
T ss_pred             HHHHHHHHcCccccccch---hhhhhHHHHHHHH-----HHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            999999999988764221   1122333332222     11122222333344445566666666666665554443322


Q ss_pred             hhhh---------------------------hHhh---------hh----------HHHHHHHHHHHhCCCcchhh-hhh
Q 012990          262 QMHD---------------------------FQEE---------YT----------SEKIVQEVKEATGAKDISDF-LKV  294 (452)
Q Consensus       262 ~~~~---------------------------l~~~---------~l----------~~~l~~Ei~~~~~~~~~~~~-~~~  294 (452)
                      ...+                           ++++         |+          |++|++||+.+++....... ...
T Consensus       235 ~~~d~l~~l~~~~~~~~~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~  314 (491)
T 3v8d_A          235 SISELISLRMFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGN  314 (491)
T ss_dssp             SCCHHHHHHHHHHHHHBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTTCCCCSSSS
T ss_pred             cccHHHHHHHHHhhccCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHhhccccccccccc
Confidence            1111                           0111         11          99999999999865311000 000


Q ss_pred             ccCCCHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccC---CCeeecCCCEEEEehhhhcCCCCCccCCCCCCCC
Q 012990          295 AGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLP---DGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKP  371 (452)
Q Consensus       295 ~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~---~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P  371 (452)
                      ...++.+++.+|||++|||+|+||++|+ +...|.+.+|+++.   +||.|||||.|.++.+++|+||++| +||++|+|
T Consensus       315 ~~~~~~~~l~~~~~l~a~i~E~lRl~p~-~~~~R~~~~d~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~p  392 (491)
T 3v8d_A          315 PICLSQAELNDLPVLDSIIKESLRLSSA-SLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIY-PDPLTFKY  392 (491)
T ss_dssp             CCCCCHHHHHCCHHHHHHHHHHHHHHEE-ECEEEEESSSEEEECSSCEEEECTTCEEEECTHHHHTCTTTS-SSTTSCCT
T ss_pred             cccCCHHHHhcChHHHHHHHHHhhcCCC-CccceeccCCeeEeecCCcEEeCCCCEEEecchhhcCCcccC-CCccccCc
Confidence            1236899999999999999999999974 56778888887663   8999999999999999999999999 99999999


Q ss_pred             CCCCCCCCCcc-------cCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcceeEEEecCCc---cccc--cceeeE
Q 012990          372 ERWLDENGIFQ-------KESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSE---TVNY--RTMINL  439 (452)
Q Consensus       372 ~R~l~~~~~~~-------~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~---~~~~--~~~~~~  439 (452)
                      +||++.++...       ...+..|+|||+|+|.|+|++||++|++++++.|+++|+|++.++..   +.+.  ....+.
T Consensus       393 ~R~~~~~~~~~~~~~~~~~~~~~~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~  472 (491)
T 3v8d_A          393 DRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLGIL  472 (491)
T ss_dssp             TTTBCTTSSBCCCCEETTEECSCCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEEC---CCCCCBCGGGTBEEEC
T ss_pred             ccccCCCCCcccccccccccCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceEEeCCCCCCCCCCCcccCcCccc
Confidence            99997654311       12356789999999999999999999999999999999999977532   2222  234567


Q ss_pred             ecCCceeEEEe
Q 012990          440 HIDGGLHVRVF  450 (452)
Q Consensus       440 ~~~~~~~v~~~  450 (452)
                      .|..++.|+++
T Consensus       473 ~p~~~i~v~~~  483 (491)
T 3v8d_A          473 PPLNDIEFKYK  483 (491)
T ss_dssp             CBSSCCEEEEE
T ss_pred             CCCCCeEEEEE
Confidence            88888888875


No 25 
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00  E-value=9.1e-56  Score=424.44  Aligned_cols=412  Identities=15%  Similarity=0.166  Sum_probs=274.0

Q ss_pred             hhcccccCCCCCCC-CCcccchHHhhhhhhhHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccCCCCc
Q 012990           27 KTLTQKSGNKQKKY-HPIGGTVFNQLLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGS  104 (452)
Q Consensus        27 ~~~~~~~~~pgP~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~  104 (452)
                      ..+..++.||||++ +|++|+++.+..   +++.++.+++++|| +|++++++.++++++||+++++++.++...++..+
T Consensus        12 ~~~~~~~~PPgp~~~~P~iG~~~~~~~---~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~   88 (498)
T 3b6h_A           12 RRTRRPGEPPLDLGSIPWLGYALDFGK---DAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHA   88 (498)
T ss_dssp             -CCCCTTCCCEECCSSTTTBTHHHHHH---CHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCH
T ss_pred             HhccCCCCCCCCCCCCcchhhHHHhcc---CHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchh
Confidence            33444588999988 899999988743   47889999999999 58899999999999999999999987643244444


Q ss_pred             chHHHHHHhcCCeeEecCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHH-hCCCCcccHHHhHHHHhHH
Q 012990          105 YNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEA-ANSDKILDIQDLFMKSTLD  183 (452)
Q Consensus       105 ~~~~~~~~~~g~~i~~~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~d~~~~~~~~~~~  183 (452)
                      .....+...+|.+++..+++.|   |+++.++|+.+.+..+.+ .+.+.+...++..... ......+++...+..++++
T Consensus        89 ~~~~~~~~~~g~~~~~~~~~~~---rr~~~~~~~~~~l~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~vi~~  164 (498)
T 3b6h_A           89 YAIFLMERIFDVQLPHYSPSDE---KARMKLTLLHRELQALTE-AMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLLR  164 (498)
T ss_dssp             HHHHHHHHTSCCCCTTCCHHHH---HHHHHTTSSHHHHHHHHH-HHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHHHHH
T ss_pred             hHHHHHHHHcCCCccccCHHHH---HHHHHHhhchHhHHHHHH-HHHHHHHHHHhhcccccCCCcceecHHHHHHHHHHH
Confidence            3444455666777666777776   455566899888888875 3444444444333221 2233468899999999999


Q ss_pred             HHhhhccCCCCCCccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHH-hccchHHHHHHHHHHHH-------------
Q 012990          184 SIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKL-LNIGSEARLKQRIEVID-------------  249 (452)
Q Consensus       184 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-------------  249 (452)
                      +++..+||.+++..+ .. ......+.+........ .....++.+... ++....++..++.+.+.             
T Consensus       165 ~~~~~~fG~~~~~~~-~~-~~~~~~~~~~~~~~~~~-~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (498)
T 3b6h_A          165 AGYLTLYGIEALPRT-HE-SQAQDRVHSADVFHTFR-QLDRLLPKLARGSLSVGDKDHMCSVKSRLWKLLSPARLARRAH  241 (498)
T ss_dssp             HHHHHHHCBSCSSCC-HH-HHHHHHHHHHHHHHHHH-HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHTCHHHHTTCBS
T ss_pred             HHHHhhcCccccccc-cc-chhhHHHhhHHHHHHHH-HHHhhHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHhcccc
Confidence            999999998874321 00 00112222222222111 111111112111 11111112222222222             


Q ss_pred             --HHHHHHHHHHHhh--hhh---------hHhh---------hh----------HHHHHHHHHHHhCCCcchhhhhhccC
Q 012990          250 --TFVYKIIRKKTDQ--MHD---------FQEE---------YT----------SEKIVQEVKEATGAKDISDFLKVAGC  297 (452)
Q Consensus       250 --~~~~~~i~~~~~~--~~~---------l~~~---------~l----------~~~l~~Ei~~~~~~~~~~~~~~~~~~  297 (452)
                        +++..+++...+.  ..+         ++++         |+          |+++++|++++++.+..+..  ....
T Consensus       242 ~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~--~~~~  319 (498)
T 3b6h_A          242 RSKWLESYLLHLEEMGVSEEMQARALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVS--QTTT  319 (498)
T ss_dssp             CCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHC------------
T ss_pred             HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcccCCCCC--cccc
Confidence              3333333322111  000         1111         21          99999999999876531100  0012


Q ss_pred             CCHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccC----CCeeecCCCEEEEehhh-hcCCCCCccCCCCCCCCC
Q 012990          298 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLP----DGFSVRKGDMVCYQAYA-MGRMKFIWGDDAEEFKPE  372 (452)
Q Consensus       298 ~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~----~g~~ip~Gt~v~~~~~~-~~~d~~~~g~~p~~F~P~  372 (452)
                      ++.+++.+||||+|||+|+||++|+ +...|.+.+|+++.    +||.|||||.|.++.++ +|+||++| +||++|+||
T Consensus       320 ~~~~~l~~lpyl~a~i~E~lRl~p~-~~~~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~~~~~~~~d~~~~-~~p~~F~Pe  397 (498)
T 3b6h_A          320 LPQKVLDSTPVLDSVLSESLRLTAA-PFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIY-TDPEVFKYN  397 (498)
T ss_dssp             CCTHHHHSCHHHHHHHHHHHHHHBC-BCEEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTS-SSTTSCCTT
T ss_pred             cCHHHHhcCHHHHHHHHHHHhccCC-CcceeeecCCeeeecCCCCeEEeCCCCEEEeCchHhhcCCcccc-CChhhcCcc
Confidence            5889999999999999999999975 67788888887752    68999999999999999 99999999 999999999


Q ss_pred             CCCCCCCCcc-------cCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcceeEEEecCCc-cc--cc--cceeeEe
Q 012990          373 RWLDENGIFQ-------KESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSE-TV--NY--RTMINLH  440 (452)
Q Consensus       373 R~l~~~~~~~-------~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~-~~--~~--~~~~~~~  440 (452)
                      ||+++++...       ...+..|+|||+|+|.|+|++||++|+++++++||++|+|++.++.. .+  +.  ....+..
T Consensus       398 Rfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  477 (498)
T 3b6h_A          398 RFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVEIPEFDLSRYGFGLMQ  477 (498)
T ss_dssp             TTBCTTSSBCCCCEETTEECSCSCCTTEETTEECSSHHHHHHHHHHHHHHHHHTEEEEESSTTCCCCCBCGGGTBSSBCC
T ss_pred             cccCCCcccccccccccccCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHceeEeCCCCCCCCCCCccccccccCC
Confidence            9997543211       11356799999999999999999999999999999999999976531 12  21  2234567


Q ss_pred             cCCceeEEEeeC
Q 012990          441 IDGGLHVRVFHR  452 (452)
Q Consensus       441 ~~~~~~v~~~~r  452 (452)
                      |..++++++++|
T Consensus       478 p~~~~~~~~~~~  489 (498)
T 3b6h_A          478 PEHDVPVRYRIR  489 (498)
T ss_dssp             BSSCCEEEEEEC
T ss_pred             CCCCccEEEEec
Confidence            777899999876


No 26 
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00  E-value=1.7e-55  Score=407.87  Aligned_cols=354  Identities=21%  Similarity=0.292  Sum_probs=272.9

Q ss_pred             CCCCCCCcccchHHhhhhhhhHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccCCCCcchHHHHHHhc
Q 012990           36 KQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLL  114 (452)
Q Consensus        36 pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~  114 (452)
                      ++++.+|++|++..+..   +++.++.+++++|| +++ ++++.++++++||+.+++|+.++  .|++++.....+..+.
T Consensus         2 ~~~~~~p~iGnl~~~~~---~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~~   75 (389)
T 1n97_A            2 KRLSLREAWPYLKDLQQ---DPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLT   75 (389)
T ss_dssp             EECCHHHHHHHHHHHHH---CHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHHH
T ss_pred             cccccccccccHHHHhh---ChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHHh
Confidence            34667899999988743   47889999999999 467 77888999999999999999876  7777752333445556


Q ss_pred             CCeeEecCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHHHHhHHHHhhhccCCCC
Q 012990          115 GDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVEL  194 (452)
Q Consensus       115 g~~i~~~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~  194 (452)
                      |.++++.+|+.|+++|++++++|+++.++.+.+ .+++.++++++.+.     +.++|+.+.+..+++++++.++||.++
T Consensus        76 g~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~-----~~~~dl~~~~~~~~~~vi~~~~fG~~~  149 (389)
T 1n97_A           76 GRGLLTDWGESWKEARKALKDPFLPKNVRGYRE-AMEEEARAFFGEWR-----GEERDLDHEMLALSLRLLGRALFGKPL  149 (389)
T ss_dssp             CSSTTTCCHHHHHHHHHHHCGGGSHHHHHTTHH-HHHHHHHHHHHTCC-----SCCEEHHHHHHHHHHHHHHHHHHSSCC
T ss_pred             CCccccCCcHHHHHHHHHhCcccCHHHHHHHHH-HHHHHHHHHHHHcc-----CCcCcHHHHHHHHHHHHHHHHHcCCcc
Confidence            788888899999999999999999999999985 88999999988774     568999999999999999999999987


Q ss_pred             CCccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHH--H-hhhhh------
Q 012990          195 DSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKK--T-DQMHD------  265 (452)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~-~~~~~------  265 (452)
                      +  +       ++.+.+..+...........   + .+++....++..++.+.+.+++.+.++++  . -+.++      
T Consensus       150 ~--~-------~~~~~~~~~~~~~~~~~~~~---~-~~~p~~~~~~~~~~~~~~~~~~~~~i~~rll~~l~~~~l~~~~~  216 (389)
T 1n97_A          150 S--P-------SLAEHALKALDRIMAQTRSP---L-ALLDLAAEARFRKDRGALYREAEALIVHPPLSHLPRERALSEAV  216 (389)
T ss_dssp             C--H-------HHHHHHHHHHHHHHHHHHCG---G-GGGCHHHHHHHHHHHHHHHHHHGGGTTSTTGGGSCHHHHHHHHH
T ss_pred             h--H-------HHHHHHHHHHHHHHHHHhhH---H-HhcCCchhHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHH
Confidence            5  1       34444444333221111110   1 22332233455666677777777766543  0 00111      


Q ss_pred             --hHhh---------h----h------HHHHHHHHHHHhCCCcchhhhhhccCCCHHHHhhcHHHHHHHHHhhcCCCCCC
Q 012990          266 --FQEE---------Y----T------SEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVP  324 (452)
Q Consensus       266 --l~~~---------~----l------~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~  324 (452)
                        ++++         |    |      |+++++|++.+                           .|||+|+||++|+++
T Consensus       217 ~~~~aG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~---------------------------~a~i~E~lRl~p~~~  269 (389)
T 1n97_A          217 TLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAA---------------------------LAAFQEALRLYPPAW  269 (389)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHH---------------------------HHHHHHHHHHSCSSC
T ss_pred             HHHHcCchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHH---------------------------HHHHHHHHhcCCCcc
Confidence              1111         1    1      77777777654                           199999999999999


Q ss_pred             CCccccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHH
Q 012990          325 VDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEF  404 (452)
Q Consensus       325 ~~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~l  404 (452)
                      ...|.+.+|+++ +||.|||||.|.++.+++|+|  +| +||++|+||||+++.    ......++|||.|+|.|+|++|
T Consensus       270 ~~~R~~~~d~~l-~g~~Ip~Gt~V~~~~~~~~rd--~~-~dp~~F~PeR~l~~~----~~~~~~~~~FG~G~r~C~G~~l  341 (389)
T 1n97_A          270 ILTRRLERPLLL-GEDRLPPGTTLVLSPYVTQRL--HF-PDGEAFRPERFLEER----GTPSGRYFPFGLGQRLCLGRDF  341 (389)
T ss_dssp             CEEEEESSCEEE-TTEEECTTCEEEECHHHHHHH--SS-TTTTSCCTTHHHHSC----CCCBTTBCTTCCSTTCCTTHHH
T ss_pred             ccceeeCCCceE-CCEEeCCCCEEEECHHHHhhh--cC-CCccccCCccCCCCC----CCCCCCccCCCCCCCCCchHHH
Confidence            888888888777 999999999999999999999  99 999999999998641    1235679999999999999999


Q ss_pred             HHHHHHHHHHHhhcceeEEEecCCccccccceeeEecCCceeEEEeeC
Q 012990          405 AYRQMKIYSAVLLSCFKFRLRNVSETVNYRTMINLHIDGGLHVRVFHR  452 (452)
Q Consensus       405 A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  452 (452)
                      |++|++++++.|+++|++++.++.. +  ..+.+..|.++++|++++|
T Consensus       342 A~~e~~~~la~ll~~f~~~~~~~~~-~--~~~~~~~p~~~~~v~~~~~  386 (389)
T 1n97_A          342 ALLEGPIVLRAFFRRFRLDPLPFPR-V--LAQVTLRPEGGLPARPREE  386 (389)
T ss_dssp             HHHHHHHHHHHHHTTCBCCCCCCCC-E--EESSSEEETTCCEECCBC-
T ss_pred             HHHHHHHHHHHHHHhceEEeCCCCc-c--cceEEeeeCCCceEEEeec
Confidence            9999999999999999999876442 2  4567788988999999875


No 27 
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00  E-value=9.5e-55  Score=415.18  Aligned_cols=390  Identities=16%  Similarity=0.204  Sum_probs=260.5

Q ss_pred             cccccCCCCCCC-CCcccchHHhhhhhhhHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccCCCCcch
Q 012990           29 LTQKSGNKQKKY-HPIGGTVFNQLLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYN  106 (452)
Q Consensus        29 ~~~~~~~pgP~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~  106 (452)
                      +...+.||||++ +|++||++.+..   +++.++.+++++|| +|.+++++.++++++||+++++++.++. .++..+..
T Consensus        14 ~~~~~~pPgp~~~~P~iG~~~~~~~---~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~-~~~~~~~~   89 (475)
T 3b98_A           14 TRRRNEPPLDKGMIPWLGHALEFGK---DAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVA-SLDQTSYA   89 (475)
T ss_dssp             CCCTTCCCEECCSSTTTBTHHHHHH---CHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTT-TEESHHHH
T ss_pred             ccCCCCCCCCCCCcchHHhHHHHhh---CHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCcc-cCCchHHH
Confidence            334588999998 999999998743   47899999999999 5788899899999999999999998653 24443333


Q ss_pred             HHHHHHhcCCeeEecCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHh--CCCCcccHHHhHHHHhHHH
Q 012990          107 YSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAA--NSDKILDIQDLFMKSTLDS  184 (452)
Q Consensus       107 ~~~~~~~~g~~i~~~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~d~~~~~~~~~~~~  184 (452)
                      ...+...+|.+++..+++.|   |+++.++|+.+.+..+.+ .+.+.+..+++.+....  .....+++...+..+++++
T Consensus        90 ~~~~~~~~g~~~~~~~~~~~---R~~~~~~f~~~~l~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (475)
T 3b98_A           90 QVLMKRIFNMILPSHNPESE---KKRAEMHFQGASLTQLSN-SMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFKT  165 (475)
T ss_dssp             HHHHHHTTCCCCTTCCHHHH---HHHHHHHTSHHHHHHHHH-HHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCCChHHH---HHHHHHHcChhhHHHHHH-HHHHHHHHHHhhcccccCCCCceeehHHHHHHHHHHHH
Confidence            33455566777666777765   567777899999998885 66777777766543221  1223567888888888888


Q ss_pred             HhhhccCCCCCCccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHH-HhccchHHHHHHHHHHHH--------------
Q 012990          185 IFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKK-LLNIGSEARLKQRIEVID--------------  249 (452)
Q Consensus       185 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--------------  249 (452)
                      ++...||.+.+    ..   ..+.+....+...     ...++.+.. +++....++..+..+.+.              
T Consensus       166 ~~~~~~g~~~~----~~---~~~~~~~~~~~~~-----~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (475)
T 3b98_A          166 GYLTVFGAENN----NS---AALTQIYEEFRRF-----DKLLPKLARTTVNKEEKQIASAAREKLWKWLTPSGLDRKPRE  233 (475)
T ss_dssp             HHHHHHCCTTS----CH---HHHHHHHHHHHHH-----HHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHSCTTSCCCCCT
T ss_pred             hhhheeCCccc----cc---hhcHHHHHHHHHH-----HhhhHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHhhccccc
Confidence            88888884321    11   2222222222111     011111110 111011112222222221              


Q ss_pred             -HHHHHHHHHHHhh--hh--h-------hHhh---------hh----------HHHHHHHHHHHhCCCcchhhhhhccCC
Q 012990          250 -TFVYKIIRKKTDQ--MH--D-------FQEE---------YT----------SEKIVQEVKEATGAKDISDFLKVAGCI  298 (452)
Q Consensus       250 -~~~~~~i~~~~~~--~~--~-------l~~~---------~l----------~~~l~~Ei~~~~~~~~~~~~~~~~~~~  298 (452)
                       +++..+++...+.  ..  .       ++++         |.          |++|++|++  .+...          +
T Consensus       234 ~d~l~~ll~~~~~~~~~~~~~i~~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~--~~~~~----------~  301 (475)
T 3b98_A          234 QSWLGSYVKQLQDEGIDAEMQRRAMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQ--GGKHL----------R  301 (475)
T ss_dssp             TSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC------------------
T ss_pred             cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHh--cCCCC----------C
Confidence             2333333322111  00  0       1111         11          999999998  22221          3


Q ss_pred             CHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccC----CCeeecCCCEEEEehhh-hcCCCCCccCCCCCCCCCC
Q 012990          299 SEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLP----DGFSVRKGDMVCYQAYA-MGRMKFIWGDDAEEFKPER  373 (452)
Q Consensus       299 ~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~----~g~~ip~Gt~v~~~~~~-~~~d~~~~g~~p~~F~P~R  373 (452)
                      +.+++.+|||++|||+|+||++|+ +...|.+.+|+++.    +||.|||||.|+++.++ +||||++| +||++|||||
T Consensus       302 ~~~~~~~lpyl~a~i~E~lRl~p~-~~~~R~~~~d~~l~~~~g~g~~Ip~Gt~V~~~~~~~~~rdp~~~-~dP~~F~PeR  379 (475)
T 3b98_A          302 LEERQKNTPVFDSVLWETLRLTAA-ALITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIH-QQPEMFQFDR  379 (475)
T ss_dssp             ------CCHHHHHHHHHHHHHHEE-ECEEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTS-SSTTSCCTTT
T ss_pred             CHHHHhcCHHHHHHHHHHHhcCCc-cceeEEecCCeEeecCCCCeEEECCCCEEEeCcHHHhcCChhhc-CCcccCCcch
Confidence            889999999999999999999987 67888888887652    78999999999999999 99999999 9999999999


Q ss_pred             CCCCCCCcc-------cCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcceeEEEecCCc-cc--cc--cceeeEec
Q 012990          374 WLDENGIFQ-------KESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSE-TV--NY--RTMINLHI  441 (452)
Q Consensus       374 ~l~~~~~~~-------~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~-~~--~~--~~~~~~~~  441 (452)
                      |+++++...       ......|+|||+|+|.|+|++||++|+++++++||++|+|++.++.. .+  +.  ....+..|
T Consensus       380 fl~~~~~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p  459 (475)
T 3b98_A          380 FLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNATVPLVDPSRYGFGILQP  459 (475)
T ss_dssp             TBCTTSCBCCCCBSSSCBCSCSCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHEEEEESSTTCCCCCBCGGGTBEEECCB
T ss_pred             hcCCCCCccccccccccccccCccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhEEEEECCCCCCCCCCCcccccccccCC
Confidence            997543211       11356799999999999999999999999999999999999976531 22  21  23346678


Q ss_pred             CCceeEEEeeC
Q 012990          442 DGGLHVRVFHR  452 (452)
Q Consensus       442 ~~~~~v~~~~r  452 (452)
                      ..++++++++|
T Consensus       460 ~~~~~~~~~~R  470 (475)
T 3b98_A          460 AGDLEIRYRIR  470 (475)
T ss_dssp             SSCCEEEEEEC
T ss_pred             CCCceEEEEec
Confidence            88999999987


No 28 
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00  E-value=3.5e-54  Score=404.16  Aligned_cols=377  Identities=16%  Similarity=0.129  Sum_probs=265.2

Q ss_pred             cccccCCCCCCCCCcccchHHhhhhhhhHHHHHHHHHHhhC-CeEEec-CCceeEEecChhhHHHHHhcccccCCCCcch
Q 012990           29 LTQKSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHG-TYRLLG-PFRSEVYSSDPANVEYMLKTNFDNYGKGSYN  106 (452)
Q Consensus        29 ~~~~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~~~~~~-~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~  106 (452)
                      +.+++.||||+++|++|++...+  ..+++.++.++ ++|| ++++++ ++.++|+++||+++++|+.++  .|++++..
T Consensus        22 ~~~~~~~PGP~~~p~lG~~~~~~--~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~   96 (436)
T 2cd8_A           22 RRTQQGTTASPPVLDLGALGQDF--AADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRN   96 (436)
T ss_dssp             ------------CCBHHHHHHHH--HHCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGG
T ss_pred             chhccCCCCCCccccCCCCCccc--ccChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCcccccc
Confidence            34458899999999999976322  23478899999 8998 577777 678899999999999999875  56665431


Q ss_pred             --HHHH--HHhcCCeeEecCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhH-HHHh
Q 012990          107 --YSIL--KDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLF-MKST  181 (452)
Q Consensus       107 --~~~~--~~~~g~~i~~~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~-~~~~  181 (452)
                        ....  ....+.++++.+|+.|+++|++++++|+...++.+.+ .+++.++++++.+.+  ..+.++|+.+.+ ..++
T Consensus        97 ~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~  173 (436)
T 2cd8_A           97 STTPLTEAEAALNHNMLESDPPRHTRLRKLVAREFTMRRVELLRP-RVQEIVDGLVDAMLA--APDGRADLMESLAWPLP  173 (436)
T ss_dssp             CSSCCCTTGGGTCCSGGGCCTTHHHHHHHHHGGGSSHHHHHTTHH-HHHHHHHHHHHHHHT--CTTSCEEHHHHTTTHHH
T ss_pred             cccccccccccccccccccCchHHHHHHHHhHHhhCHHHHHHHHH-HHHHHHHHHHHHHHh--ccCCCcchHHHHHHHHH
Confidence              1110  0224577888899999999999999999999999985 899999999999974  235689999977 5799


Q ss_pred             HHHHhhhccCCCCCCccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHh
Q 012990          182 LDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTD  261 (452)
Q Consensus       182 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  261 (452)
                      +++|+. +||.+.+.       ...+.+.+..+...               .   ..++..++.+.+.+++.+.++++++
T Consensus       174 ~~vi~~-~~G~~~~~-------~~~~~~~~~~~~~~---------------~---~~~~~~~~~~~~~~~~~~~i~~r~~  227 (436)
T 2cd8_A          174 ITVISE-LLGVPEPD-------RAAFRVWTDAFVFP---------------D---DPAQAQTAMAEMSGYLSRLIDSKRG  227 (436)
T ss_dssp             HHHHHH-HHTCCGGG-------HHHHHHHHHHHHSC---------------S---STTHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHH-HhCCCHHH-------HHHHHHHHHHHhcc---------------C---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999998 68986531       12333322222110               0   0134556677778888888887765


Q ss_pred             hhh-hhHhhhh-----------HHHHHHHHHHHhCCCcchhhhhhccC-------C--CHHHHhhcHHHHHHHHHhhcCC
Q 012990          262 QMH-DFQEEYT-----------SEKIVQEVKEATGAKDISDFLKVAGC-------I--SEEALEKMHYLHAAITETLRLY  320 (452)
Q Consensus       262 ~~~-~l~~~~l-----------~~~l~~Ei~~~~~~~~~~~~~~~~~~-------~--~~~~~~~lp~l~a~i~E~lRl~  320 (452)
                      ... ++++.++           .+++..++...+.++..++.......       +  ...-.++.+|++|||+|+||++
T Consensus       228 ~~~~d~l~~ll~~~~~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~e~~~l~a~i~E~lRl~  307 (436)
T 2cd8_A          228 QDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMTLLDGAVEEMLRYE  307 (436)
T ss_dssp             SCCCSHHHHHHHHHHHCTTTSCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCHHHHHHHHHCGGGHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHhhChhhHHHHHHHHHHhc
Confidence            321 2322222           44555556555555433222111100       0  1111224568999999999999


Q ss_pred             CCCC-CCccccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCC
Q 012990          321 PAVP-VDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRIC  399 (452)
Q Consensus       321 p~~~-~~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C  399 (452)
                      |+++ ...|.+.+|+++ +||.|||||.|+++.+++|+||++| +||++|+||||           ...++|||.|+|.|
T Consensus       308 p~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~-----------~~~~~pFG~G~r~C  374 (436)
T 2cd8_A          308 GPVESATYRFPVEPVDL-DGTVIPAGDTVLVVLADAHRTPERF-PDPHRFDIRRD-----------TAGHLAFGHGIHFC  374 (436)
T ss_dssp             CSBSSCCCBEESSCEEE-TTEEECTTCCEEECHHHHTTCTTTS-SSTTSCCTTSC-----------CTTCCTTCCSTTCC
T ss_pred             CcccCceeEEeCCCeEE-CCEEECCCCEEEeChHHhCCCcccC-CCccccCCCCC-----------CCCCCCCCCCCCCC
Confidence            9999 688888888777 9999999999999999999999999 99999999996           13589999999999


Q ss_pred             cchHHHHHHHHHHHHHhhcce-eEEEecCCccccccceeeEecCCceeEEEeeC
Q 012990          400 LGKEFAYRQMKIYSAVLLSCF-KFRLRNVSETVNYRTMINLHIDGGLHVRVFHR  452 (452)
Q Consensus       400 ~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  452 (452)
                      +|++||++|++++++.|+++| ++++..++.++.+....++++..+++|++++|
T Consensus       375 ~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~r  428 (436)
T 2cd8_A          375 IGAPLARLEARIAVRALLERCPDLALDVSPGELVWYPNPMIRGLKALPIRWRRG  428 (436)
T ss_dssp             TTHHHHHHHHHHHHHHHHHSCTTCCBCSCGGGCCBCCCTTBCCBSCCEEC----
T ss_pred             cCHHHHHHHHHHHHHHHHHhCCCceecCCCccceeccCcccCCcceeEEEEecC
Confidence            999999999999999999999 69986543455555555667778999999886


No 29 
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00  E-value=1.8e-52  Score=391.68  Aligned_cols=376  Identities=13%  Similarity=0.130  Sum_probs=275.1

Q ss_pred             CCCCcccchHHhhhhhhhHHHHHHHHHHhhC-C-eEEecCCceeEEecChhhHHHHHhcccccCCCCcc-hHHHHHHhcC
Q 012990           39 KYHPIGGTVFNQLLNFNRLHHYMTDLAAKHG-T-YRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSY-NYSILKDLLG  115 (452)
Q Consensus        39 ~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~-~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~-~~~~~~~~~g  115 (452)
                      |+.|++|+...+..   +++.++.+++++|| + +++..++.+.+++++|++++.++. . ..|++... .......++|
T Consensus         6 Pg~P~lG~~~~~~~---~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~~-~-~~~~~~~~~~~~~~~~~~g   80 (417)
T 1izo_A            6 PHDKSLDNSLTLLK---EGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYD-T-DRFQRQNALPKRVQKSLFG   80 (417)
T ss_dssp             CBCCCTTHHHHHHH---HGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHTC-T-TTEECTTCSCHHHHTTTTC
T ss_pred             CCCCccchHHHHhh---CcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHhc-c-cccccccccccchhhhhcc
Confidence            33499999999854   47889999999997 4 677777888999999999986653 3 34554322 2223445566


Q ss_pred             -CeeEecCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHHHHhHHHHhhhccCCCC
Q 012990          116 -DGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVEL  194 (452)
Q Consensus       116 -~~i~~~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~  194 (452)
                       .++++.+|+.|+++|++++++|+++.++.+.+ .+++.++++++.|.+    +.++|+.+.+..+++++++.+ ||.+.
T Consensus        81 ~~~l~~~dg~~h~~~R~~~~~~f~~~~l~~~~~-~i~~~~~~l~~~l~~----~~~~dl~~~~~~~~~~vi~~~-~G~~~  154 (417)
T 1izo_A           81 VNAIQGMDGSAHIHRKMLFLSLMTPPHQKRLAE-LMTEEWKAAVTRWEK----ADEVVLFEEAKEILCRVACYW-AGVPL  154 (417)
T ss_dssp             TTCGGGCCHHHHHHHHHHHHHTSSHHHHHHHHH-HHHHHHHHHHHHHTT----SSEEEHHHHHHHHHHHHHHHH-HTCCC
T ss_pred             ccceeecCChHHHHHHHHhhhhcCHHHHHHHHH-HHHHHHHHHHHHHhc----CCCeeHHHHHHHHHHHHHHHH-cCCCC
Confidence             56888899999999999999999999999985 889999999998853    568999999999999999998 69876


Q ss_pred             CCccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhh-----hhhHhh
Q 012990          195 DSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEE  269 (452)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~l~~~  269 (452)
                      +..     ....+.+.+.......    ..         ..+...+..++.+.+.+++..+++++++..     +++++.
T Consensus       155 ~~~-----~~~~~~~~~~~~~~~~----~~---------~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~d~l~~  216 (417)
T 1izo_A          155 KET-----EVKERADDFIDMVDAF----GA---------VGPRHWKGRRARPRAEEWIEVMIEDARAGLLKTTSGTALHE  216 (417)
T ss_dssp             CTT-----THHHHHHHHHHHHHHT----TC---------CSHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCTTSHHHH
T ss_pred             Cch-----HHHHHHHHHHHHHhhc----cc---------CCccchhHHHHHHHHHHHHHHHHHHHHhhccCCCcCCHHHH
Confidence            531     1122322222221110    00         001123455677788899999998877531     223332


Q ss_pred             hh-----------HHHHHHHHHHHhCCCcchhhhhhc-------cCCC-HHHHh--hcHHHHHHHHHhhcCCCCCCCCcc
Q 012990          270 YT-----------SEKIVQEVKEATGAKDISDFLKVA-------GCIS-EEALE--KMHYLHAAITETLRLYPAVPVDAK  328 (452)
Q Consensus       270 ~l-----------~~~l~~Ei~~~~~~~~~~~~~~~~-------~~~~-~~~~~--~lp~l~a~i~E~lRl~p~~~~~~r  328 (452)
                      ++           .+.+..++...+. +...+.....       ..+. .+.+.  ++||++++|+|+||++|+++...|
T Consensus       217 ll~~~~~~g~~l~~~~~~~~~~~~~a-g~~tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~l~a~i~E~lRl~p~~~~~~R  295 (417)
T 1izo_A          217 MAFHTQEDGSQLDSRMAAIELINVLR-PIVAISYFLVFSALALHEHPKYKEWLRSGNSREREMFVQEVRRYYPFGPFLGA  295 (417)
T ss_dssp             HHHCBCTTSCBCCHHHHHHHHHHHHH-HHHTHHHHHHHHHHHHHHSTHHHHHHHTCCHHHHHHHHHHHHHHSCCCCEEEE
T ss_pred             HHHhccccCCCCCHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHhhCHHHHHHHHhcCCHHHHHHHHHHhhcCCcccccce
Confidence            22           3444445444331 1111100000       0011 12222  589999999999999999999889


Q ss_pred             ccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCC----CCCCcchHH
Q 012990          329 MCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAG----PRICLGKEF  404 (452)
Q Consensus       329 ~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G----~r~C~G~~l  404 (452)
                      ++.+|+++ +|+.|||||.|.++.+++||||++| +||++|+|+||++.+     ..+..|+|||.|    +|.|+|++|
T Consensus       296 ~~~~d~~l-~g~~ip~G~~v~~~~~~~~rdp~~~-~dp~~F~P~R~~~~~-----~~~~~~~~FG~G~r~~~r~C~G~~l  368 (417)
T 1izo_A          296 LVKKDFVW-NNCEFKKGTSVLLDLYGTNHDPRLW-DHPDEFRPERFAERE-----ENLFDMIPQGGGHAEKGHRCPGEGI  368 (417)
T ss_dssp             EECSCEEE-TTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCGGGGTTCC-----CCSSSCCTTCSSCTTSSSCCTTHHH
T ss_pred             eecCCeeE-CCEEECCCCEEEecHHHhhcCcccc-CCccccChhhcCCCC-----CCCcceeCCCCCCCCCCCcCCCHHH
Confidence            99988887 9999999999999999999999999 999999999999753     235679999999    599999999


Q ss_pred             HHHHHHHHHHHhhcceeEEEecCCccccccceeeEecCCceeEEEeeC
Q 012990          405 AYRQMKIYSAVLLSCFKFRLRNVSETVNYRTMINLHIDGGLHVRVFHR  452 (452)
Q Consensus       405 A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  452 (452)
                      |++|++++++.|+++|+|++.+++.... ...+++.|.++++|++++|
T Consensus       369 A~~e~~~~l~~ll~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~r  415 (417)
T 1izo_A          369 TIEVMKASLDFLVHQIEYDVPEQSLHYS-LARMPSLPESGFVMSGIRR  415 (417)
T ss_dssp             HHHHHHHHHHHHHHTEEEECCSCCCCCC-SSSSSCCCTTCCEEEEEEE
T ss_pred             HHHHHHHHHHHHHHhCeEEeCCCCcCcc-cccCCCCCCCCceEeeeeC
Confidence            9999999999999999999876432222 2356778999999999876


No 30 
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00  E-value=1.3e-51  Score=385.74  Aligned_cols=376  Identities=14%  Similarity=0.218  Sum_probs=273.0

Q ss_pred             CCCCCCCCcccchHHhhhhhhhHHHHHHHHHHhh-C-CeEEecCCceeEEecChhhHHHHHhcccccCCCCcch-HHHHH
Q 012990           35 NKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKH-G-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYN-YSILK  111 (452)
Q Consensus        35 ~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~y-G-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~-~~~~~  111 (452)
                      ||||   |++|+++.+..   +++.++.+++++| | ++++..++.+.+++++|+.++ ++.+. ..|++.+.. .....
T Consensus         4 pPg~---P~iG~~~~~~~---~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~~~   75 (415)
T 3awm_A            4 TPHT---KGPDETLSLLA---DPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVAIQK   75 (415)
T ss_dssp             --------CCCCHHHHHH---STTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHHHHT
T ss_pred             CCCC---CccchHHHHHh---ChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhcc-cccccccccchhhhh
Confidence            6666   89999998854   4788999999999 6 577777778899999999987 66554 456654322 22333


Q ss_pred             HhcC-CeeEecCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHHHHhHHHHhhhcc
Q 012990          112 DLLG-DGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAF  190 (452)
Q Consensus       112 ~~~g-~~i~~~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~f  190 (452)
                      .++| .+++..||+.|+++|++++++|+++.++.+.+ .+++.++++++.|.+    +.++|+.+.+..+++++++.+ |
T Consensus        76 ~~~g~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~ll~~~~~----~~~vdl~~~~~~~~~~vi~~~-~  149 (415)
T 3awm_A           76 TLLGQGGVQGLDGETHRHRKQMFMGLMTPERVRALAQ-LFEAEWRRAVPGWTR----KGEIVFYDELHEPLTRAVCAW-A  149 (415)
T ss_dssp             TTSCSSSGGGCCHHHHHHHHHHHHTTCCHHHHHHHHH-HHHHHHHHHHHHHHH----HSEEEHHHHHHHHHHHHHHHH-H
T ss_pred             hccCCcceeecCcHHHHHHHHHHHHhcCHHHHHHHHH-HHHHHHHHHHHhhcc----CCcEeHHHHHHHHHHHHHHHH-c
Confidence            4556 56788899999999999999999999999985 899999999999965    347999999999999999999 8


Q ss_pred             CCCCCCccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhh-----hhh
Q 012990          191 GVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQ-----MHD  265 (452)
Q Consensus       191 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~  265 (452)
                      |.+.+..     ....+.+.+.......     .        ...+...+..++.+.+.+++..+++++++.     .++
T Consensus       150 G~~~~~~-----~~~~~~~~~~~~~~~~-----~--------~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~d  211 (415)
T 3awm_A          150 GVPLPDD-----EAGNRAGELRALFDAA-----G--------SASPRHLWSRLARRRVDAWAKRIIEGIRAGSIGSGSGT  211 (415)
T ss_dssp             TCCCCGG-----GHHHHHHHHHHHHHST-----T--------CSSHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCCTTS
T ss_pred             CCCCCcc-----hHHHHHHHHHHHHHHh-----c--------ccCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Confidence            9876531     1122222222211110     0        001122345677778889999999888763     123


Q ss_pred             hHhhhh-----------HHHHHHHHHHHhCCCcchhhhhhc-------cCCC--HHHHhhcHHHHHHHHHhhcCCCCCCC
Q 012990          266 FQEEYT-----------SEKIVQEVKEATGAKDISDFLKVA-------GCIS--EEALEKMHYLHAAITETLRLYPAVPV  325 (452)
Q Consensus       266 l~~~~l-----------~~~l~~Ei~~~~~~~~~~~~~~~~-------~~~~--~~~~~~lp~l~a~i~E~lRl~p~~~~  325 (452)
                      +++.++           .+.+..++...+. +...+.....       ..+.  ..-.+++||++++|+|+||++|+++.
T Consensus       212 ~l~~ll~~~~~~g~~~~~~~~~~~~~~~~a-g~~tt~~~l~~~l~~L~~~P~~~~~l~~e~~~l~a~i~E~lRl~p~~~~  290 (415)
T 3awm_A          212 AAYAIAWHRDRHDDLLSPHVAAVELVNVLR-PTVAIAVYITFVAHALQTCSGIRAALVQQPDYAELFVQEVRRFYPFFPA  290 (415)
T ss_dssp             HHHHHHHCBCTTSCBCCHHHHHHHHHHHHH-HHHTHHHHHHHHHHHHHHSTTHHHHHHHCTTHHHHHHHHHHHHSCCSCE
T ss_pred             HHHHHHhhhhccCCCCCHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Confidence            433322           3445555544431 1111100000       0111  12233589999999999999999999


Q ss_pred             CccccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCC----CCCCcc
Q 012990          326 DAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAG----PRICLG  401 (452)
Q Consensus       326 ~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G----~r~C~G  401 (452)
                      ..|++.+|+++ +|+.|||||.|.++.+++||||++| +||++|||+||++++.     ....|+|||.|    +|.|+|
T Consensus       291 ~~R~~~~d~~l-~G~~ip~G~~V~~~~~~~~rdp~~~-~dp~~F~P~R~~~~~~-----~~~~~~~FG~G~r~~~r~C~G  363 (415)
T 3awm_A          291 VVARASQDFEW-EGMAFPEGRQVVLDLYGSNHDAATW-ADPQEFRPERFRAWDE-----DSFNFIPQGGGDHYLGHRCPG  363 (415)
T ss_dssp             EEEEESSCEEE-TTEEECTTCEEEEEHHHHHTCHHHH-SSTTSCCGGGGGGCCC-----CSSSCCTTCCSCTTTSCCCTT
T ss_pred             cceeecCCeEE-CCEEECCCCEEEeCchhhcCCcccc-CCccccChhhcCCCCC-----CCCCccCCCCCCCCCCCcCch
Confidence            88999888887 9999999999999999999999999 9999999999996531     35679999999    599999


Q ss_pred             hHHHHHHHHHHHHHhhcceeEEEecCCccccccceeeEecCCceeEEEee
Q 012990          402 KEFAYRQMKIYSAVLLSCFKFRLRNVSETVNYRTMINLHIDGGLHVRVFH  451 (452)
Q Consensus       402 ~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  451 (452)
                      ++||++|++++++.|+++|+|++.+++.... ...+++.|.+++++++++
T Consensus       364 ~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~  412 (415)
T 3awm_A          364 EWIVLAIMKVAAHLLVNAMRYDVPDQDLSID-FARLPALPKSGFVMRNVH  412 (415)
T ss_dssp             HHHHHHHHHHHHHHHHHTCEEECCSCCCCBC-TTSSSCCBTTCCEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHhcEEEeCCCCCCcC-cCCCccccCCCceEEEEe
Confidence            9999999999999999999999866432222 245678899999999986


No 31 
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00  E-value=2.3e-51  Score=382.61  Aligned_cols=372  Identities=10%  Similarity=0.064  Sum_probs=259.2

Q ss_pred             CCCCCCCCCcccchHHhhhhhhhHHHHHHHHHHhhCC-eEEecC-CceeEEecChhhHHHHHhccc-ccCCCCcch----
Q 012990           34 GNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHGT-YRLLGP-FRSEVYSSDPANVEYMLKTNF-DNYGKGSYN----  106 (452)
Q Consensus        34 ~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~-~~~~~~-~~~~vvv~~pe~~~~il~~~~-~~~~~~~~~----  106 (452)
                      .||||+++|++|+...      +++..+.+++ +||+ +++.++ |...++|++++.+++++.++. ..+..++..    
T Consensus         2 ~pPGp~~~P~~g~~~~------~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~   74 (404)
T 1jfb_A            2 MASGAPSFPFSRASGP------EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELS   74 (404)
T ss_dssp             ----CCBSSCCCSSTT------SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCS
T ss_pred             CCCCCCCCCCCCCcCC------CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCcccc
Confidence            4899999999998654      3677788886 5885 666653 667788999999999998652 222222211    


Q ss_pred             HHHHHHhcC-CeeEecCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHHHHhHHHH
Q 012990          107 YSILKDLLG-DGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSI  185 (452)
Q Consensus       107 ~~~~~~~~g-~~i~~~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~i  185 (452)
                      ........+ .++++.+|+.|+++|++++++|+.++++.+.+ .+++.++++++.+.+....++++|+.+.+...+.+++
T Consensus        75 ~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~~~i  153 (404)
T 1jfb_A           75 ASGKQAAKAKPTFVDMDPPEHMHQRSMVEPTFTPEAVKNLQP-YIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYI  153 (404)
T ss_dssp             HHHHHHTTSCCCGGGCCTTHHHHHHTTTGGGGSHHHHHHHHH-HHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHHHHHH
T ss_pred             ccccchhcccCcccccCchhHHHHHHHhhhhcCHHHHHHHHH-HHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHH
Confidence            111111223 56777899999999999999999999999985 8999999999999875444678999999999999999


Q ss_pred             hhhccCCCCCCccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhhh-
Q 012990          186 FKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMH-  264 (452)
Q Consensus       186 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-  264 (452)
                      +..+||.+.+.        .++.+......              ..+  ....++..++.+.+.+++.++++++++... 
T Consensus       154 ~~~~~G~~~~~--------~~~~~~~~~~~--------------~~~--~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~  209 (404)
T 1jfb_A          154 IYTLLGVPFND--------LEYLTQQNAIR--------------TNG--SSTAREASAANQELLDYLAILVEQRLVEPKD  209 (404)
T ss_dssp             HHHHHTCCGGG--------HHHHHHHHHHH--------------HCT--TSCHHHHHHHHHHHHHHHHHHHHHHHHSCCS
T ss_pred             HHHHcCCCHHH--------HHHHHHHHHHH--------------hcc--CcchHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            99999987642        11211111100              000  122344556677788888888887765422 


Q ss_pred             hhHhhhh----------HHHHHHHHHHHhCCCcchhhhhhccC-------C--CHHHHhhcHHHHHHHHHhhcCCCCCC-
Q 012990          265 DFQEEYT----------SEKIVQEVKEATGAKDISDFLKVAGC-------I--SEEALEKMHYLHAAITETLRLYPAVP-  324 (452)
Q Consensus       265 ~l~~~~l----------~~~l~~Ei~~~~~~~~~~~~~~~~~~-------~--~~~~~~~lp~l~a~i~E~lRl~p~~~-  324 (452)
                      ++++.++          .+++..++...+.++..++.......       +  ...-.++.+|++|||+|+||++|+++ 
T Consensus       210 d~l~~ll~~~~~~~~l~~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~~~~yl~a~i~E~lRl~p~~~~  289 (404)
T 1jfb_A          210 DIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASAL  289 (404)
T ss_dssp             SHHHHHHHHTTTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCGGGHHHHHHHHHHHSCSCCS
T ss_pred             cHHHHHHHhhccCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHhChHhHHHHHHHHHhhCCCccc
Confidence            2322222          44455555554444332221111000       0  00111135899999999999999999 


Q ss_pred             CCccccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHH
Q 012990          325 VDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEF  404 (452)
Q Consensus       325 ~~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~l  404 (452)
                      ...|.+.+|+++ +||.|||||.|.++.+++||||++| +||++|+||||+++         ..++|||.|+|.|+|++|
T Consensus       290 ~~~R~~~~d~~~-~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeRf~~~---------~~~~~Fg~G~r~C~G~~l  358 (404)
T 1jfb_A          290 AIKRTAKEDVMI-GDKLVRANEGIIASNQSANRDEEVF-ENPDEFNMNRKWPP---------QDPLGFGFGDHRCIAEHL  358 (404)
T ss_dssp             CCEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCCCCS---------SCCCTTCCGGGSCTTHHH
T ss_pred             cceeeeCCCeeE-CCEEECCCCEEEeCHHhhCCCchhC-CChhhcCCCCCCCC---------CCCCCCCCCCccCCCHHH
Confidence            578888888777 9999999999999999999999999 99999999998753         248999999999999999


Q ss_pred             HHHHHHHHHHHhhcce-eEEEecCCccccccceeeEecCCceeEE
Q 012990          405 AYRQMKIYSAVLLSCF-KFRLRNVSETVNYRTMINLHIDGGLHVR  448 (452)
Q Consensus       405 A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~v~  448 (452)
                      |++|++++++.|+++| ++++..+..++.+......+....++|+
T Consensus       359 A~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~g~~~lpv~  403 (404)
T 1jfb_A          359 AKAELTTVFSTLYQKFPDLKVAVPLGKINYTPLNRDVGIVDLPVI  403 (404)
T ss_dssp             HHHHHHHHHHHHHHHCTTCEESSCGGGCEECCTTSCSCEEECEEE
T ss_pred             HHHHHHHHHHHHHHHCCCceecCCcccccccccccccCcccceee
Confidence            9999999999999999 7998654334444333333344445554


No 32 
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00  E-value=4.4e-51  Score=380.00  Aligned_cols=364  Identities=15%  Similarity=0.152  Sum_probs=266.0

Q ss_pred             ccCCCCCCCCCcccchHHhhhhhhhHHHHHHHHHHhhC-CeEEe----c-CC-ceeEEecChhhHHHHH-hcccccCCCC
Q 012990           32 KSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHG-TYRLL----G-PF-RSEVYSSDPANVEYML-KTNFDNYGKG  103 (452)
Q Consensus        32 ~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~~~~~----~-~~-~~~vvv~~pe~~~~il-~~~~~~~~~~  103 (452)
                      ...||||+++|+.     +   ..+++.++.++ ++|| ++++.    + ++ .++|+++||+++++|+ .+.  .|+++
T Consensus         9 ~~lppgp~~~p~~-----~---~~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~--~~~~~   77 (406)
T 1ued_A            9 APLLREPANFQLR-----T---NCDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHE--HFTTR   77 (406)
T ss_dssp             CCEEECCTTTTCE-----E---TTEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCS--SEECC
T ss_pred             CCCcccCcccCCC-----C---CCCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCc--ccccc
Confidence            3678999999987     2   23467888999 9999 57777    5 67 8899999999999999 543  34444


Q ss_pred             cch-HH--HHHH--hcCCeeEecCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHH
Q 012990          104 SYN-YS--ILKD--LLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFM  178 (452)
Q Consensus       104 ~~~-~~--~~~~--~~g~~i~~~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~  178 (452)
                      +.. ..  .+..  ..+.++++.+|+.|+++|++++++|+.+.++.+.+ .+++.++++++.+..   .|+++|+.+.+.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~---~g~~~d~~~~~~  153 (406)
T 1ued_A           78 PQFTQSKSGAHVEAQFVGQISTYDPPEHTRLRKMLTPEFTVRRIRRMEP-AIQSLIDDRLDLLEA---EGPSADLQGLFA  153 (406)
T ss_dssp             CCC---------CGGGTTCGGGCCTTHHHHHHHHHGGGSSHHHHHHHHH-HHHHHHHHHHHHHHH---HCTTEEHHHHTH
T ss_pred             ccccccccccccccccccccccCCCHHHHHHHHHhhhhhCHHHHHHHHH-HHHHHHHHHHHHHHh---cCCCeeHHHHHH
Confidence            321 11  1111  13457888899999999999999999999999985 899999999999974   356899999887


Q ss_pred             H-HhHHHHhhhccCCCCCCccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH
Q 012990          179 K-STLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIR  257 (452)
Q Consensus       179 ~-~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  257 (452)
                      . +++++++. +||.+.+.       ...+.+.+......                 ....++..++.+.+.+++.+.++
T Consensus       154 ~~~~~~vi~~-~~G~~~~~-------~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~i~  208 (406)
T 1ued_A          154 DPVGAHALCE-LLGIPRDD-------QREFVRRIRRNADL-----------------SRGLKARAADSAAFNRYLDNLLA  208 (406)
T ss_dssp             HHHHHHHHHH-HHTCCHHH-------HHHHHHHHHHCC--------------------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhHHHHHHH-HcCCCHHH-------HHHHHHHHHHHHhc-----------------cCCHHHHHHHHHHHHHHHHHHHH
Confidence            5 99999994 79976421       12233322221110                 01123455667778888888888


Q ss_pred             HHHhhh-hhhHhhhh--------HHHHHHHHHHHhCCCcchhhhhhc---------cCCCHHHHhhcHHHHHHHHHhhcC
Q 012990          258 KKTDQM-HDFQEEYT--------SEKIVQEVKEATGAKDISDFLKVA---------GCISEEALEKMHYLHAAITETLRL  319 (452)
Q Consensus       258 ~~~~~~-~~l~~~~l--------~~~l~~Ei~~~~~~~~~~~~~~~~---------~~~~~~~~~~lp~l~a~i~E~lRl  319 (452)
                      +++++. .++++.++        .+++..++...+.++..++.....         ......-.++..|++|||+|+||+
T Consensus       209 ~r~~~~~~d~l~~ll~~~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~~l~a~i~E~lRl  288 (406)
T 1ued_A          209 RQRADPDDGLLGMIVRDHGDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPEKAERVVNELVRY  288 (406)
T ss_dssp             HHHHSCCSSHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCHHHHHHHHHHHHHH
T ss_pred             HHHhCCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhChHHHHHHHhCHHHHHHHHHHHHhc
Confidence            776542 22333222        455555555555444322211110         001112223456899999999999


Q ss_pred             CCCCCC-CccccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCC
Q 012990          320 YPAVPV-DAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRI  398 (452)
Q Consensus       320 ~p~~~~-~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~  398 (452)
                      +|+++. ..|.+.+|+++ +||.|||||.|.++.+++||||++| +||++|+||||           ...++|||.|+|.
T Consensus       289 ~p~~~~~~~R~~~~d~~~-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~-----------~~~~~pFG~G~r~  355 (406)
T 1ued_A          289 LSPVQAPNPRLAIKDVVI-DGQLIKAGDYVLCSILMANRDEALT-PDPDVLDANRA-----------AVSDVGFGHGIHY  355 (406)
T ss_dssp             HCSSCSCSCEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTSC-----------CCCCCTTCCSTTS
T ss_pred             CCCcccCcceecCCCEEE-CCEEECCCCEEEecHHHhcCCchhC-CChhhcCCCCC-----------CCCCCCCCCCCcC
Confidence            999996 78888888777 9999999999999999999999999 99999999998           2358999999999


Q ss_pred             CcchHHHHHHHHHHHHHhhcce-eEEEecCCccccccceeeEecCCceeEEE
Q 012990          399 CLGKEFAYRQMKIYSAVLLSCF-KFRLRNVSETVNYRTMINLHIDGGLHVRV  449 (452)
Q Consensus       399 C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  449 (452)
                      |+|++||++|++++++.|+++| ++++..+..++.+....++++ .+++|++
T Consensus       356 C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~-~~lpv~~  406 (406)
T 1ued_A          356 CVGAALARSMLRMAYQTLWRRFPGLRLAVPIEEVKYRSAFVDCP-DQVPVTW  406 (406)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSSSCCB-SCCEEEC
T ss_pred             CCcHHHHHHHHHHHHHHHHHhCCCceecCCcccccccccccccC-CeeeeeC
Confidence            9999999999999999999999 799976444666667777888 8898874


No 33 
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00  E-value=5.3e-50  Score=382.14  Aligned_cols=371  Identities=14%  Similarity=0.169  Sum_probs=252.6

Q ss_pred             cCCCCCCCCCcccchHHhhhh--hh-hHHHHHHHHHHhhCC--eEEecCCc-------eeEEecChhhHHHHHhc----c
Q 012990           33 SGNKQKKYHPIGGTVFNQLLN--FN-RLHHYMTDLAAKHGT--YRLLGPFR-------SEVYSSDPANVEYMLKT----N   96 (452)
Q Consensus        33 ~~~pgP~~~p~~G~~~~~~~~--~~-~~~~~~~~~~~~yG~--~~~~~~~~-------~~vvv~~pe~~~~il~~----~   96 (452)
                      +.+|||.++|++|++..+...  .. +++.++.+++++||+  |++.+++.       ..|++.+.+..+.++..    +
T Consensus         9 ~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~~~~~   88 (473)
T 3dan_A            9 REIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVSKVEK   88 (473)
T ss_dssp             CCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTTTEEC
T ss_pred             CCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCcceec
Confidence            789999999999999887532  34 688999999999985  67766533       34445555544455431    1


Q ss_pred             cccCCCCcchHHHHHHhcC----CeeEecCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCccc
Q 012990           97 FDNYGKGSYNYSILKDLLG----DGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILD  172 (452)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~g----~~i~~~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d  172 (452)
                      ...+..... . .. ...|    .+++..+|+.|+++|++++++|++ .++.+.+ .+++.++++++.|.....++.++|
T Consensus        89 ~~~~~~~~~-~-~~-~~~g~~~~~~~~~~~~~~h~~~R~~~~~~f~~-~~~~~~~-~i~~~~~~ll~~~~~~~~~~~~vd  163 (473)
T 3dan_A           89 KDLFTGTYM-P-ST-KLTGGYRVLSYLDPSEPRHAQLKNLLFFMLKN-SSNRVIP-QFETTYTELFEGLEAELAKNGKAA  163 (473)
T ss_dssp             SSCTTSSSC-C-CG-GGGTTSCCGGGCCTTSHHHHHHHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHSCEE
T ss_pred             ccccccccc-C-Cc-cccCCCcceeeeCCCcHHHHHHHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHhccCCccc
Confidence            111111110 0 01 2233    345667999999999999999999 4888885 899999999999976443456899


Q ss_pred             HHHhHHHHhHHHHhhhccCCCCCCccCCCchhchHHHhHhHHHHHHHHHHHH-HH-HHHHHHhccch-------HHHHHH
Q 012990          173 IQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVD-IF-WKIKKLLNIGS-------EARLKQ  243 (452)
Q Consensus       173 ~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~-------~~~~~~  243 (452)
                      +.+.+..+++++++.++||.+++..+ ..   ..+...+...........+. .+ ..+...+....       .+...+
T Consensus       164 l~~~~~~~~~~~i~~~~~G~~~~~~~-~~---~~~~~~~~~~~~~~~~p~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~  239 (473)
T 3dan_A          164 FNDVGEQAAFRFLGRAYFNSNPEETK-LG---TSAPTLISSWVLFNLAPTLDLGLPWFLQEPLLHTFRLPAFLIKSTYNK  239 (473)
T ss_dssp             CHHHHHHHHHHHHHHHHHSCCGGGST-TT---TCHHHHHHHHHHHHHGGGCCCSCCHHHHHHHHSSSCCCGGGTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCCchh-hh---hhHHHHHHHHHHHhccchhhhcchHHHHHHHhhhccchHhhhhhchhh
Confidence            99999999999999999999887621 11   22222222111110000000 00 00111111111       222223


Q ss_pred             HHHHHHHHHHHHHHHHHhhh---hhh------Hh---h---------h-----------hHHHHHHHHHHHhCC-Ccchh
Q 012990          244 RIEVIDTFVYKIIRKKTDQM---HDF------QE---E---------Y-----------TSEKIVQEVKEATGA-KDISD  290 (452)
Q Consensus       244 ~~~~~~~~~~~~i~~~~~~~---~~l------~~---~---------~-----------l~~~l~~Ei~~~~~~-~~~~~  290 (452)
                      ..+.+.+++..++++..+..   +++      +.   +         |           .|++|++|++.+++. ..   
T Consensus       240 ~~~~~~~~~~~ll~~~~~~~l~~~ei~~~~l~~~g~~~~~tta~~l~~~l~~L~~~~P~~~~~lr~Ei~~~~~~~~~---  316 (473)
T 3dan_A          240 LYDYFQSVATPVMEQAEKLGVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWIGLAGENLHTQLAEEIRGAIKSYGD---  316 (473)
T ss_dssp             HHHHHHHHCHHHHHHHHHHTCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHST---
T ss_pred             hHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcccC---
Confidence            33334444444554332210   110      00   0         1           178999999998765 21   


Q ss_pred             hhhhccCCCHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccC---CCeeecCCCEEEEehhhhcCCCCCccCCCC
Q 012990          291 FLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLP---DGFSVRKGDMVCYQAYAMGRMKFIWGDDAE  367 (452)
Q Consensus       291 ~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~---~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~  367 (452)
                           ..++++++.+|||++|||+|+||++|+++...|++.+|+++.   +||.|||||.|.++.+++|+||++| +||+
T Consensus       317 -----~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~~~~~g~~Ip~G~~v~~~~~~~~~dp~~~-~dp~  390 (473)
T 3dan_A          317 -----GNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVF-DRPE  390 (473)
T ss_dssp             -----TSCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEEECSSCEEEECTTCEEEEEHHHHTTCTTTS-SSTT
T ss_pred             -----CCCCHHHHhcCchHHHHHHHHHhcCCCcccccccccCCcEeecCCCceEeCCCCEEEechHHhhCCchhc-CCcc
Confidence                 236999999999999999999999999999889988887764   8999999999999999999999999 9999


Q ss_pred             CCCCCCCCCCCCCcccCCCCcccc---------ccCCCCCCcchHHHHHHHHHHHHHhhcceeEEEec
Q 012990          368 EFKPERWLDENGIFQKESPFKFTA---------FQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRN  426 (452)
Q Consensus       368 ~F~P~R~l~~~~~~~~~~~~~~~~---------Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~  426 (452)
                      +|||+||+++..     ....++|         ||+|+|.|+|++||++|+++++++|+++|++...+
T Consensus       391 ~F~p~R~~~~~~-----~~~~~~~fg~G~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~  453 (473)
T 3dan_A          391 EYVPDRFVGDGE-----ALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDSFEIE  453 (473)
T ss_dssp             SCCTTTTSGGGG-----GGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred             cCCccccCCCcc-----cccccceecCCcCcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCeEEcc
Confidence            999999997621     1233444         55555999999999999999999999999976554


No 34 
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00  E-value=1.1e-50  Score=378.25  Aligned_cols=374  Identities=13%  Similarity=0.123  Sum_probs=259.9

Q ss_pred             HHhhhhccc-ccCCCCCCCCCcccchHHhhhhhhhHHHHHHHHHHhhCCeEEecCCceeEEecChhhHHHHHhcccccCC
Q 012990           23 QIVTKTLTQ-KSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYG  101 (452)
Q Consensus        23 ~~~~~~~~~-~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~  101 (452)
                      +.+++.+.. ...+|||+.             ..+++.++.++++ ||++  +.++.+.++++|++.+++|+.+. +.|+
T Consensus         8 ~~iyr~~~~pl~~~PGp~~-------------~~~p~~~~~~l~~-~gpv--~~~~~~~~vv~~~~~v~~vl~~~-~~f~   70 (411)
T 2jjn_A            8 TCCARRTLTTIDEVPGMAD-------------ETALLDWLGTMRE-KQPV--WQDRYGVWHVFRHADVQTVLRDT-ATFS   70 (411)
T ss_dssp             ---------CCCSCCCSSC-------------HHHHHHHHHHHHH-HCSE--EECTTSCEEECSHHHHHHHHHCT-TTEE
T ss_pred             HHhhhcccCCCCCCCCccc-------------ccChHHHHHHHHH-hCCc--ccCCCCeEEECCHHHHHHHHcCc-cccc
Confidence            344444444 488888882             1247788888876 8977  55667799999999999999875 5677


Q ss_pred             CCcchHHHHHH--hcCCeeEecCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHh-HH
Q 012990          102 KGSYNYSILKD--LLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDL-FM  178 (452)
Q Consensus       102 ~~~~~~~~~~~--~~g~~i~~~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~-~~  178 (452)
                      +++...  +..  ..+.++++.+|+.|+++|++++++|+.+.++.+.+ .+++.++++++.      .+.++|+... ..
T Consensus        71 ~~~~~~--~~~~~~~~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~ll~~------~~~~~d~~~~~~~  141 (411)
T 2jjn_A           71 SDPTRV--IEGASPTPGMIHEIDPPEHRALRKVVSSAFTPRTISDLEP-RIRDVTRSLLAD------AGESFDLVDVLAF  141 (411)
T ss_dssp             SCGGGG--STTCCCCTTCGGGCCTTHHHHHHHHHHHHSCHHHHHTTHH-HHHHHHHHHHHT------SCSEEEHHHHTTT
T ss_pred             Cccccc--CCcccccccccccCCchHHHHHHHHhhhhcCHHHHHHHHH-HHHHHHHHHHhc------CCCceeHHHHHHH
Confidence            765321  112  23466788899999999999999999999999985 888899998877      2347999855 46


Q ss_pred             HHhHHHHhhhccCCCCCCccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH
Q 012990          179 KSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRK  258 (452)
Q Consensus       179 ~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  258 (452)
                      .+++++|+.+ ||.+.+..       ..+.+....+...     ..+.     +......++..++.+.+.+++.+.+++
T Consensus       142 ~~~~~vi~~~-fG~~~~~~-------~~~~~~~~~~~~~-----~~~~-----~~~p~~~~~~~~~~~~~~~~~~~~i~~  203 (411)
T 2jjn_A          142 PLPVTIVAEL-LGLPPMDH-------EQFGDWSGALVDI-----QMDD-----PTDPALAERIADVLNPLTAYLKARCAE  203 (411)
T ss_dssp             HHHHHHHHHH-HTCCSCCC-------STTCCHHHHHHHS-----CCSC-----TTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH-cCCCHHHH-------HHHHHHHHHHHhc-----cCcc-----ccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8999999998 99886532       1222222222211     0000     000012234566777888888888888


Q ss_pred             HHhhh-hhhHhhhh----------HHHHHHHHHHHhCCCcchhhhhhcc-------CC--CHHHHhhcHHHHHHHHHhhc
Q 012990          259 KTDQM-HDFQEEYT----------SEKIVQEVKEATGAKDISDFLKVAG-------CI--SEEALEKMHYLHAAITETLR  318 (452)
Q Consensus       259 ~~~~~-~~l~~~~l----------~~~l~~Ei~~~~~~~~~~~~~~~~~-------~~--~~~~~~~lp~l~a~i~E~lR  318 (452)
                      ++++. +++++.++          .+++..++...+.++..++......       .+  ...-.++..|++|+|+|+||
T Consensus       204 r~~~~~~d~l~~ll~~~~~~~~l~~~el~~~~~~~~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lR  283 (411)
T 2jjn_A          204 RRADPGDDLISRLVLAEVDGRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPGRIPAIVEEVLR  283 (411)
T ss_dssp             HHHSCCSSHHHHHHHCCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHCGGGHHHHHHHHHH
T ss_pred             HHhCCCCCHHHHHHhcccCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHHhHHHHHHHHhh
Confidence            76532 22332222          4445555554444332222111100       00  11122245599999999999


Q ss_pred             CCCCCCCCccccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCC
Q 012990          319 LYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRI  398 (452)
Q Consensus       319 l~p~~~~~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~  398 (452)
                      ++|+++...|.+.+|+++ +||.|||||.|.++.+++|+||++| +||++|+||||.+         ...++|||.|+|.
T Consensus       284 l~p~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~~---------~~~~~pFG~G~r~  352 (411)
T 2jjn_A          284 YRPPFPQMQRTTTKATEV-AGVPIPADVMVNTWVLSANRDSDAH-DDPDRFDPSRKSG---------GAAQLSFGHGVHF  352 (411)
T ss_dssp             HSCSSCEEEEEESSCEEE-TTEEECSSCEEEEEHHHHHTCTTTS-SSTTSCCTTCCCS---------SCCCGGGCSSTTC
T ss_pred             hCCCcCCcceEECCCeEE-CCEEECCCCEEEechhhhCCChhhc-CCccccCCCCCCC---------CCCccCCCCCCcc
Confidence            999999888888888777 9999999999999999999999999 9999999999842         1358999999999


Q ss_pred             CcchHHHHHHHHHHHHHhhccee-EEEecCCccccccceeeEecCCceeEEEeeC
Q 012990          399 CLGKEFAYRQMKIYSAVLLSCFK-FRLRNVSETVNYRTMINLHIDGGLHVRVFHR  452 (452)
Q Consensus       399 C~G~~lA~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  452 (452)
                      |+|++||++|++++++.|+++|+ +++.+ +.+++.....+.....+++|++++|
T Consensus       353 C~G~~lA~~e~~~~la~ll~~f~~~~~~~-~~~~~~~~~~~~~~~~~lpv~~~~~  406 (411)
T 2jjn_A          353 CLGAPLARLENRVALEEIIARFGRLTVDR-DDERLRHFEQIVLGTRHLPVLAGSS  406 (411)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHSCCEECC-SSCCCCBCCSSSSSBSCCEEECSCC
T ss_pred             CcCHHHHHHHHHHHHHHHHHhCCcceECC-CCceeccccccccCcceeEEEecCC
Confidence            99999999999999999999995 99974 2233224455566777899998764


No 35 
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00  E-value=1.2e-50  Score=388.56  Aligned_cols=391  Identities=15%  Similarity=0.160  Sum_probs=262.9

Q ss_pred             ccCCCCCCCCCcccchHHhhhh--hhhHHHHHHHHHHhhC--CeEEecCCcee-------EEecChhhHHHHHhccc---
Q 012990           32 KSGNKQKKYHPIGGTVFNQLLN--FNRLHHYMTDLAAKHG--TYRLLGPFRSE-------VYSSDPANVEYMLKTNF---   97 (452)
Q Consensus        32 ~~~~pgP~~~p~~G~~~~~~~~--~~~~~~~~~~~~~~yG--~~~~~~~~~~~-------vvv~~pe~~~~il~~~~---   97 (452)
                      .+.||||+++|++|+++.+...  ..+++.++.+++++||  +|++.+++.++       +++.+++..+.++.+..   
T Consensus        27 ~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~~v~k  106 (495)
T 3dsk_A           27 IRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVDKVEK  106 (495)
T ss_dssp             BCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTTTEEC
T ss_pred             CCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeecccccccc
Confidence            3789999999999999887532  3468899999999998  47888888777       66677776666664421   


Q ss_pred             -ccCCCCcchHHHHHHhcC----CeeEecCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCccc
Q 012990           98 -DNYGKGSYNYSILKDLLG----DGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILD  172 (452)
Q Consensus        98 -~~~~~~~~~~~~~~~~~g----~~i~~~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d  172 (452)
                       ..+... +.. .. .++|    .+++..+|+.|+++|+++.+.|+... ..+.+ .+++.++++++.|.+...++.++|
T Consensus       107 ~~~~~~~-~~~-~~-~l~g~~~~~~~~~~~g~~h~~~R~~~~~~f~~~~-~~~~~-~i~~~~~~ll~~~~~~~~~~~~vd  181 (495)
T 3dsk_A          107 KDLLTGT-YMP-ST-ELTGGYRILSYLDPSEPKHEKLKNLLFFLLKSSR-NRIFP-EFQATYSELFDSLEKELSLKGKAD  181 (495)
T ss_dssp             SSCTTSS-SCC-CG-GGGTTCCCGGGCCTTSHHHHHHHHHHHHHHHHTT-TTHHH-HHHHHHHHHHHHHHHHHHHHSSEE
T ss_pred             ccccccc-CCC-Cc-cccCCCcceeeeCCCchHHHHHHHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHhccCCCcc
Confidence             111111 111 12 3444    23455689999999999999998754 77774 889999999999976443456899


Q ss_pred             HHHhHHHHhHHHHhhhccCCCCCCccCCCchhchHHHhHhHHHHHHHHHHHH-HH-HHHHHHhccch-------HHHHHH
Q 012990          173 IQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVD-IF-WKIKKLLNIGS-------EARLKQ  243 (452)
Q Consensus       173 ~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~-------~~~~~~  243 (452)
                      +.+.+..+++++++.++||.+.+..+ ..   ..+.+.+............. .+ ..+...+....       .....+
T Consensus       182 l~~~~~~~~~~~i~~~~~G~~~~~~~-~~---~~~~~~~~~~~~~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  257 (495)
T 3dsk_A          182 FGGSSDGTAFNFLARAFYGTNPADTK-LK---ADAPGLITKWVLFNLHPLLSIGLPRVIEEPLIHTFSLPPALVKSDYQR  257 (495)
T ss_dssp             SHHHHHHHHHHHHHHHHHSCCGGGST-TT---TCHHHHHHHHHHHHHGGGCCCSSCHHHHHHHHSSSCCCGGGGHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCcchhh-hh---hhHHHHHHHHHHHhhhhHhHhccHHHHHHHHHHhhcccchhhhhhHHH
Confidence            99999999999999999998876541 11   22222222222111000000 00 01111111000       111222


Q ss_pred             HHHHHHHHHHHHHHHHHhh---hhh--------h-Hhh-------------hh-------HHHHHHHHHHHhCCCcchhh
Q 012990          244 RIEVIDTFVYKIIRKKTDQ---MHD--------F-QEE-------------YT-------SEKIVQEVKEATGAKDISDF  291 (452)
Q Consensus       244 ~~~~~~~~~~~~i~~~~~~---~~~--------l-~~~-------------~l-------~~~l~~Ei~~~~~~~~~~~~  291 (452)
                      ..+.+.+....+++...+.   .++        + +++             +|       |++|++|++.+++.+.    
T Consensus       258 ~~~~~~~~~~~ll~~~~~~~l~~~ei~~~~~~~l~~ag~~tt~~~l~~~l~~L~~~~P~~~~~lr~Ei~~~~~~~~----  333 (495)
T 3dsk_A          258 LYEFFLESAGEILVEADKLGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEEIRSVIKSNG----  333 (495)
T ss_dssp             HHHHHHHHCHHHHHHHHHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTT----
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhccCC----
Confidence            2222223333343332111   011        1 111             11       8999999999886532    


Q ss_pred             hhhccCCCHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccC---CCeeecCCCEEEEehhhhcCCCCCccCCCCC
Q 012990          292 LKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLP---DGFSVRKGDMVCYQAYAMGRMKFIWGDDAEE  368 (452)
Q Consensus       292 ~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~---~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~  368 (452)
                          ..++++++.+|||++|||+|+||++|+++...|++.+|+++.   +||.||||+.|+++.+++|+||++| +||++
T Consensus       334 ----~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~a~~d~~l~~~~~g~~IpkG~~v~~~~~~~~~dp~~~-~dp~~  408 (495)
T 3dsk_A          334 ----GELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIF-DRADE  408 (495)
T ss_dssp             ----TCCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEEECSSCEEEECTTCEEEEEHHHHHTCTTTS-TTTTS
T ss_pred             ----CCCCHHHHhcCHHHHHHHHHHHhcCCCccccceeecCCeEeccCCCceEECCCCEEEeccHHhhCCcccC-CCccc
Confidence                236999999999999999999999999999989998888874   5999999999999999999999999 99999


Q ss_pred             CCCCCCCCCCCCcc-c----CCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcceeEEEecCCccccccceeeEec
Q 012990          369 FKPERWLDENGIFQ-K----ESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSETVNYRTMINLHI  441 (452)
Q Consensus       369 F~P~R~l~~~~~~~-~----~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~  441 (452)
                      |+|+||+++++... .    .....++|||+|+|.|+|++||.+|+++++++|+++|++...+++ +..+..+.+++.
T Consensus       409 F~P~Rfl~~~~~~~~~~~~fg~G~~~~~fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~  485 (495)
T 3dsk_A          409 FVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEVG-TSPLGSSVNFSS  485 (495)
T ss_dssp             CCTTTTCHHHHHHGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEEEE-ECSSSEEEEEEE
T ss_pred             cCCcccCCCCccchhhcccccCCcCcCCCCCCCCcCchHHHHHHHHHHHHHHHHHHCceEeCCCC-Ccccccccccee
Confidence            99999997532100 0    001124555566699999999999999999999999998765533 233344444443


No 36 
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00  E-value=7.4e-50  Score=374.64  Aligned_cols=385  Identities=15%  Similarity=0.132  Sum_probs=266.1

Q ss_pred             ccCCCCCCCCCcccchHHhh-hhh-hhHHHHHHHHHHhhCCeEEec-CCceeEEecChhhHHHHHhcccccCCCCcc-hH
Q 012990           32 KSGNKQKKYHPIGGTVFNQL-LNF-NRLHHYMTDLAAKHGTYRLLG-PFRSEVYSSDPANVEYMLKTNFDNYGKGSY-NY  107 (452)
Q Consensus        32 ~~~~pgP~~~p~~G~~~~~~-~~~-~~~~~~~~~~~~~yG~~~~~~-~~~~~vvv~~pe~~~~il~~~~~~~~~~~~-~~  107 (452)
                      ++.|||     ++|++...- ... .+++..+.+++++++++.+.. |+.++|++++++.+++++.+. +.|++++. ..
T Consensus         5 ~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r~~~~~   78 (428)
T 1cpt_A            5 ATIPEH-----IARTVILPQGYADDEVIYPAFKWLRDEQPLAMAHIEGYDPMWIATKHADVMQIGKQP-GLFSNAEGSEI   78 (428)
T ss_dssp             CCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHHHCSEEEECCTTSCCEEEECSHHHHHHHHHCT-TTEESSSSCSS
T ss_pred             cccchh-----hhcccCChhhhcccCCccHHHHHHHHhCCeeeccccCCCCeEEEccHHHHHHHHcCc-hhccCcccccc
Confidence            466777     888654331 111 457889999987434677776 678899999999999999765 56766543 11


Q ss_pred             --HHHH-H-h---cC------CeeEecCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHH
Q 012990          108 --SILK-D-L---LG------DGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQ  174 (452)
Q Consensus       108 --~~~~-~-~---~g------~~i~~~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~  174 (452)
                        .... . +   .|      .++++.+|+.|+++|++++++|+.+.++.+.+ .+++.++++++.+.+   .+.++|+.
T Consensus        79 ~~~~~~~~~~~~~~g~~~~~~~~l~~~~g~~~~~~Rr~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~---~~~~~d~~  154 (428)
T 1cpt_A           79 LYDQNNEAFMRSISGGCPHVIDSLTSMDPPTHTAYRGLTLNWFQPASIRKLEE-NIRRIAQASVQRLLD---FDGECDFM  154 (428)
T ss_dssp             CCCHHHHHHHHHHTTTSSCSSCCGGGCCTTHHHHHHHHHHTTSSHHHHGGGHH-HHHHHHHHHHHHHHT---SSSEEEHH
T ss_pred             CCcccccchhccccccccccccccccCChHHHHHHHHHhhhhhCHHHHHHHHH-HHHHHHHHHHHHHHH---hCCCeehH
Confidence              0011 1 2   32      46788899999999999999999999999985 899999999999875   23579998


Q ss_pred             Hh-HHHHhHHHHhhhccCCCCCCccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Q 012990          175 DL-FMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVY  253 (452)
Q Consensus       175 ~~-~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (452)
                      .. ...+++++|+.+ ||.+.+..       ..+.+....+..... ..+..++ +..++.....++..++.+.+.+++.
T Consensus       155 ~~~~~~~~~~vi~~~-fG~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~  224 (428)
T 1cpt_A          155 TDCALYYPLHVVMTA-LGVPEDDE-------PLMLKLTQDFFGVHE-PDEQAVA-APRQSADEAARRFHETIATFYDYFN  224 (428)
T ss_dssp             HHTTTTHHHHHHHHH-HTCCGGGH-------HHHHHHHHTTTCC------------------CHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhhhHHHHHHHH-cCCCHhHH-------HHHHHHHHHHHhccc-ccccccc-cccccchhhHHHHHHHHHHHHHHHH
Confidence            55 467999999999 99876421       223332222211100 0011111 1111111223456677888899999


Q ss_pred             HHHHHHHhhhh-hhHhhhh----------HHHHHHHHHHHhCCCcchhhhhhccC---------CCHHHHhhcHHHHHHH
Q 012990          254 KIIRKKTDQMH-DFQEEYT----------SEKIVQEVKEATGAKDISDFLKVAGC---------ISEEALEKMHYLHAAI  313 (452)
Q Consensus       254 ~~i~~~~~~~~-~l~~~~l----------~~~l~~Ei~~~~~~~~~~~~~~~~~~---------~~~~~~~~lp~l~a~i  313 (452)
                      +.+++++++.. ++++.++          .+++..++...+.++..++.......         ....-.++..|++|||
T Consensus       225 ~~i~~r~~~~~~dll~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i  304 (428)
T 1cpt_A          225 GFTVDRRSCPKDDVMSLLANSKLDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSDPALIPRLV  304 (428)
T ss_dssp             HHHHHHTTSCCSSHHHHHHHCBSSSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHH
T ss_pred             HHHHHHHcCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHhHHHHHHHH
Confidence            99988865422 2333322          45555665555544432221111000         0111122345899999


Q ss_pred             HHhhcCCCCCCCCccccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCcccccc
Q 012990          314 TETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQ  393 (452)
Q Consensus       314 ~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg  393 (452)
                      +|+||++|+++...|.+.+|+++ +||.|||||.|+++.+++||||++| +||++|+||||..           .++|||
T Consensus       305 ~E~lRl~p~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~~-----------~~l~FG  371 (428)
T 1cpt_A          305 DEAVRWTAPVKSFMRTALADTEV-RGQNIKRGDRIMLSYPSANRDEEVF-SNPDEFDITRFPN-----------RHLGFG  371 (428)
T ss_dssp             HHHHHHHCCBCCCEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTC-SSTTSCCTTCCSC-----------CCCTTC
T ss_pred             HHHHHhCCcccccceeeCCCeeE-CCEEECCCCEEEeCHHHhCCChhhC-CChhhcCCCCCCC-----------CCCCCC
Confidence            99999999999888998888777 9999999999999999999999999 9999999999941           389999


Q ss_pred             CCCCCCcchHHHHHHHHHHHHHhhccee-EEEecCCccccccceeeEecCCceeEEEeeC
Q 012990          394 AGPRICLGKEFAYRQMKIYSAVLLSCFK-FRLRNVSETVNYRTMINLHIDGGLHVRVFHR  452 (452)
Q Consensus       394 ~G~r~C~G~~lA~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  452 (452)
                      .|+|.|+|++||++|++++++.|+++|+ +++.+ +..  +..........+++|+++||
T Consensus       372 ~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~-~~~--~~~~~~~~~~~~lpv~~~p~  428 (428)
T 1cpt_A          372 WGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSG-PPR--LVATNFVGGPKNVPIRFTKA  428 (428)
T ss_dssp             CSTTCCTTHHHHHHHHHHHHHHHGGGEEEEEESS-CCE--ECCCSSBCSEEECEEEEEEC
T ss_pred             CCCCCCCcHHHHHHHHHHHHHHHHHhCCCceeCC-Ccc--cccCccccCcceeeEEeeCC
Confidence            9999999999999999999999999997 78764 222  22333344555799999986


No 37 
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00  E-value=2.3e-49  Score=369.09  Aligned_cols=357  Identities=15%  Similarity=0.136  Sum_probs=259.5

Q ss_pred             hhHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccCCCCcch-----HHHHHHhcCCeeEecCchhHHH
Q 012990           55 NRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYN-----YSILKDLLGDGIFTVDGEKWRE  128 (452)
Q Consensus        55 ~~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~-----~~~~~~~~g~~i~~~~g~~w~~  128 (452)
                      .+++.++.++ ++|| ++++..++.++|++++++.+++++.++ ..|++++..     ...+....+.++++.+|+.|++
T Consensus        13 ~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~~   90 (404)
T 3ejb_B           13 KNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQNQMMLFQNQPDHRR   90 (404)
T ss_dssp             HCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHHTSGGGCCTTHHHH
T ss_pred             cCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhhcchhhcCCchHHH
Confidence            3478888888 5788 577888889999999999999999876 567665421     1123344567888899999999


Q ss_pred             hHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHH-HHhHHHHhhhccCCCCCCccCCCchhchH
Q 012990          129 QRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFM-KSTLDSIFKVAFGVELDSVCGSNEEGTRF  207 (452)
Q Consensus       129 ~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~-~~~~~~i~~~~fG~~~~~~~~~~~~~~~~  207 (452)
                      +|++++++|++++++.+.+ .+++.++.+++.+.+    +..+|+...+. .++.++++.+ ||.+.+..       ..+
T Consensus        91 ~Rr~~~~~fs~~~l~~~~~-~i~~~~~~ll~~l~~----~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~-------~~~  157 (404)
T 3ejb_B           91 LRTLASGAFTPRTTESYQP-YIIETVHHLLDQVQG----KKKMEVISDFAFPLASFVIANI-IGVPEEDR-------EQL  157 (404)
T ss_dssp             HHHHHHGGGSHHHHHTTHH-HHHHHHHHHHHTTTT----TSEEEHHHHTHHHHHHHHHHHH-HTCCGGGH-------HHH
T ss_pred             HHHHHHhhcCHHHHHHHHH-HHHHHHHHHHHHhhh----cCCcchHHHHHHHHHHHHHHHH-cCCCHHHH-------HHH
Confidence            9999999999999999985 889999999988753    45789866554 5889999985 89765421       233


Q ss_pred             HHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhHhhhh---------HHHHHH
Q 012990          208 SSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMH-DFQEEYT---------SEKIVQ  277 (452)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~l~~~~l---------~~~l~~  277 (452)
                      .+....+.....    .+       ......++..++.+.+.+++.+.+++++.+.. ++++.++         .+++..
T Consensus       158 ~~~~~~~~~~~~----~p-------~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~ls~~el~~  226 (404)
T 3ejb_B          158 KEWAASLIQTID----FT-------RSRKALTEGNIMAVQAMAYFKELIQKRKRHPQQDMISMLLKGREKDKLTEEEAAS  226 (404)
T ss_dssp             HHHHHHHHGGGS----TT-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHC----CCCHHHHHH
T ss_pred             HHHHHHHHHhcc----CC-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcchHHHHHHhcccCCCCCHHHHHH
Confidence            333222211100    00       00012345567777888888888888765432 2332222         344555


Q ss_pred             HHHHHhCCCcchhhhhhcc-------C--CCHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccCCCeeecCCCEE
Q 012990          278 EVKEATGAKDISDFLKVAG-------C--ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMV  348 (452)
Q Consensus       278 Ei~~~~~~~~~~~~~~~~~-------~--~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~Gt~v  348 (452)
                      ++...+.++..++......       .  ....-.+++.|++++|+|+||++|+++...|.+.+|+++ +||.|||||.|
T Consensus       227 ~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~-~g~~ip~Gt~v  305 (404)
T 3ejb_B          227 TCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPDLIGTAVEECLRYESPTQMTARVASEDIDI-CGVTIRQGEQV  305 (404)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGGGHHHHHHHHHHHSCSBCEEEEEESSCEEE-TTEEECTTCEE
T ss_pred             HHHHHHHcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHHHHHHHHHHHHHhCCcccccceEeCCCeEE-CCEEECCCCEE
Confidence            5544443332222111100       0  011222346789999999999999999888888888777 99999999999


Q ss_pred             EEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcce-eEEEecC
Q 012990          349 CYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF-KFRLRNV  427 (452)
Q Consensus       349 ~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~  427 (452)
                      .++.+++|+||++| +||++|+||||.           ..++|||.|+|.|+|++||++|+++++++|+++| ++++.++
T Consensus       306 ~~~~~~~~rdp~~~-~dp~~F~p~R~~-----------~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~  373 (404)
T 3ejb_B          306 YLLLGAANRDPSIF-TNPDVFDITRSP-----------NPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNLADF  373 (404)
T ss_dssp             EEEHHHHTTCTTTS-SSTTSCCTTCSS-----------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEEC--
T ss_pred             EecHHHhCCChhhC-CCcceeCCCCCC-----------CCCCCCCCcCccCcCHHHHHHHHHHHHHHHHHhCcccccCCC
Confidence            99999999999999 999999999982           3489999999999999999999999999999999 9999753


Q ss_pred             CccccccceeeEecCCceeEEEeeC
Q 012990          428 SETVNYRTMINLHIDGGLHVRVFHR  452 (452)
Q Consensus       428 ~~~~~~~~~~~~~~~~~~~v~~~~r  452 (452)
                        ++.+..+.+++....++|++++|
T Consensus       374 --~~~~~~~~~~~~~~~lpv~~~~~  396 (404)
T 3ejb_B          374 --EWRYRPLFGFRALEELPVTFEAS  396 (404)
T ss_dssp             --CCCBCSCSSBCCBSCCEEECC--
T ss_pred             --CceeccCcccCCcceeEEEEecc
Confidence              45566677778888999999876


No 38 
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00  E-value=1.6e-49  Score=370.18  Aligned_cols=369  Identities=13%  Similarity=0.117  Sum_probs=261.6

Q ss_pred             cCCCCCCCCCcccchHHhhhhhhhHHHHHHHHHHhh-C-CeEEec-CCceeEEecChhhHHHHHhcccccCCCCcc---h
Q 012990           33 SGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKH-G-TYRLLG-PFRSEVYSSDPANVEYMLKTNFDNYGKGSY---N  106 (452)
Q Consensus        33 ~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~y-G-~~~~~~-~~~~~vvv~~pe~~~~il~~~~~~~~~~~~---~  106 (452)
                      ..||+|+.+|.+.....+   ..+++..+.++ ++| | ++++.+ ++.+.++|+|++++++|+.++  .+++.+.   +
T Consensus         5 ~~~~~~~~~P~~~~~~~~---~~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~   78 (412)
T 2zbx_A            5 ATTPQTTDAPAFPSNRSC---PYQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDP--RLSSNRTDDNF   78 (412)
T ss_dssp             ---CCCCSSCBSSCCCSS---TTSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEECCTTSTTS
T ss_pred             CCCCCCCCCCCCCCCchh---ccChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCc--ccccCcccccc
Confidence            467888888865322333   33478889999 777 8 577776 788999999999999999864  2333321   1


Q ss_pred             HHHH-H--Hh--cCCeeEecCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHHH-H
Q 012990          107 YSIL-K--DL--LGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMK-S  180 (452)
Q Consensus       107 ~~~~-~--~~--~g~~i~~~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~-~  180 (452)
                      .... .  .+  .+.++++.+|+.|+++|++++++|+.+.++.+.+ .+++.++++++.+..   .|.++|+.+.+.. +
T Consensus        79 ~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~~  154 (412)
T 2zbx_A           79 PATSPRFEAVRESPQAFIGLDPPEHGTRRRMTISEFTVKRIKGMRP-EVEEVVHGFLDEMLA---AGPTADLVSQFALPV  154 (412)
T ss_dssp             CCCSGGGC----CCCCGGGCCTTHHHHHHTTTGGGGSHHHHHHHHH-HHHHHHHHHHHHHHH---HCSCEEHHHHTTTHH
T ss_pred             cccccccccccccccccccCCcHHHHHHHHHhhhhcCHHHHHHHHH-HHHHHHHHHHHHHHh---cCCCccHHHHHHHHH
Confidence            1000 0  01  2456777899999999999999999999999985 899999999999974   2568999998875 8


Q ss_pred             hHHHHhhhccCCCCCCccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHH
Q 012990          181 TLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKT  260 (452)
Q Consensus       181 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  260 (452)
                      +.++++. +||.+.+.       ...+.+.+..+...                 ... ++..++.+.+.+++..++++++
T Consensus       155 ~~~vi~~-~~G~~~~~-------~~~~~~~~~~~~~~-----------------~~~-~~~~~~~~~~~~~~~~~i~~r~  208 (412)
T 2zbx_A          155 PSMVICR-LLGVPYAD-------HEFFQDASKRLVQS-----------------TDA-QSALTARNDLAGYLDGLITQFQ  208 (412)
T ss_dssp             HHHHHHH-HHTCCGGG-------HHHHHHHHHHHHHC-----------------SSH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHH-HcCCCHHH-------HHHHHHHHHHHhcc-----------------CcH-HHHHHHHHHHHHHHHHHHHHHH
Confidence            8999997 69986532       12333332222110                 011 4455667778888888888776


Q ss_pred             hhh-hhhHhhhh----------HHHHHHHHHHHhCCCcchhhhhhccC-------C--CHHHHhhcHHHHHHHHHhhcCC
Q 012990          261 DQM-HDFQEEYT----------SEKIVQEVKEATGAKDISDFLKVAGC-------I--SEEALEKMHYLHAAITETLRLY  320 (452)
Q Consensus       261 ~~~-~~l~~~~l----------~~~l~~Ei~~~~~~~~~~~~~~~~~~-------~--~~~~~~~lp~l~a~i~E~lRl~  320 (452)
                      ++. +++++.++          .+++..++...+.++..++.......       +  ...-.++..|++|||+|+||++
T Consensus       209 ~~~~~d~l~~ll~~~~~~~~ls~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~~l~a~i~E~lRl~  288 (412)
T 2zbx_A          209 TEPGAGLVGALVADQLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRSLVPGAVEELLRYL  288 (412)
T ss_dssp             HSCCSSHHHHHHHTTTTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGGGHHHHHHHHHHHH
T ss_pred             hCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhChHhHHHHHHHHHHhC
Confidence            542 22322222          44455555544443322221111000       0  0111123468999999999999


Q ss_pred             CCCC-CCccccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCC
Q 012990          321 PAVP-VDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRIC  399 (452)
Q Consensus       321 p~~~-~~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C  399 (452)
                      |+++ ...|.+.+|+++ +||.|||||.|.++.+++|+||++| +||++|+||||           ...++|||.|+|.|
T Consensus       289 p~~~~~~~R~~~~d~~~-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~-----------~~~~l~FG~G~r~C  355 (412)
T 2zbx_A          289 AIADIAGGRVATADIEV-EGQLIRAGEGVIVVNSIANRDGTVY-EDPDALDIHRS-----------ARHHLAFGFGVHQC  355 (412)
T ss_dssp             CCCGGGCEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTSC-----------CTTCCTTCCSTTSC
T ss_pred             CccccccceeeCCCeEE-CCEEECCCCEEEeChhhhcCCcccc-CCccccCCCCC-----------CCCccCCCCCCCcC
Confidence            9999 578888888777 9999999999999999999999999 99999999997           23589999999999


Q ss_pred             cchHHHHHHHHHHHHHhhcce-eEEEecCCccccccceeeEecCCceeEEEe
Q 012990          400 LGKEFAYRQMKIYSAVLLSCF-KFRLRNVSETVNYRTMINLHIDGGLHVRVF  450 (452)
Q Consensus       400 ~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  450 (452)
                      +|++||++|++++++.|+++| ++++..+..++.+..+.+.+....++|+..
T Consensus       356 ~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~g~~~lpv~~~  407 (412)
T 2zbx_A          356 LGQNLARLELEVILNALMDRVPTLRLAVPVEQLVLRPGTTIQGVNELPVTWH  407 (412)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGSCBCCTTSCCCBSCCEEECC
T ss_pred             ccHHHHHHHHHHHHHHHHHhcCcccccCCcccceeccccccCCcceeeeecc
Confidence            999999999999999999999 799976444555555556666677888764


No 39 
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00  E-value=6.6e-50  Score=372.12  Aligned_cols=366  Identities=14%  Similarity=0.137  Sum_probs=265.1

Q ss_pred             cCCCCCCCCCcccchHHhhhhhhhHHHHHHHHHHhhC-CeEEec-CCce-eEEecChhhHHHHHhcccccCCCCcchHHH
Q 012990           33 SGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHG-TYRLLG-PFRS-EVYSSDPANVEYMLKTNFDNYGKGSYNYSI  109 (452)
Q Consensus        33 ~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~~~~~~-~~~~-~vvv~~pe~~~~il~~~~~~~~~~~~~~~~  109 (452)
                      +.+|+|+++|+.+..      ..+++.++.+++ +|| ++++.. ++.+ +++|+||+++++|+.+  ..|++++.....
T Consensus         8 ~~~~~~~~~p~~~~~------~~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~--~~f~~~~~~~~~   78 (406)
T 1s1f_A            8 QAVPPVRDWPAVDLP------GSDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTND--PRFGREAVMDRQ   78 (406)
T ss_dssp             CCSCCEEECCCCCCC------TTCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTC--TTEESTTTTTTT
T ss_pred             hhccCCCCCCCCccc------ccCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcC--CCccCCcCCCCC
Confidence            678888888888762      234677888885 688 466665 4666 9999999999999986  357665432111


Q ss_pred             ---HHH-h--cCCeeEecCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHH-HHhH
Q 012990          110 ---LKD-L--LGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFM-KSTL  182 (452)
Q Consensus       110 ---~~~-~--~g~~i~~~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~-~~~~  182 (452)
                         +.. .  .+.++++.+|+.|+++|++++++|+.+.++.+.+ .+++.++++++.+.+   .+.++|+...+. .+++
T Consensus        79 ~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~  154 (406)
T 1s1f_A           79 VTRLAPHFIPARGAVGFLDPPDHTRLRRSVAAAFTARGVERVRE-RSRGMLDELVDAMLR---AGPPADLTEAVLSPFPI  154 (406)
T ss_dssp             BCBSSSSCSSCTTSGGGCCTTHHHHHHHHHHHHHSHHHHHHHHH-HHHHHHHHHHHHHHH---HCSSEEHHHHTTTHHHH
T ss_pred             cccccccccccccccccCCchHHHHHHHHHHHhhCHHHHHHHHH-HHHHHHHHHHHHHHh---cCCCccHHHHHhhHhHH
Confidence               111 2  2567888899999999999999999999999985 899999999999974   245799987664 7999


Q ss_pred             HHHhhhccCCCCCCccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012990          183 DSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQ  262 (452)
Q Consensus       183 ~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  262 (452)
                      ++++. +||.+.+..       ..+.+....+...     .         .+   .++..++.+.+.+++.++++++++.
T Consensus       155 ~vi~~-~~G~~~~~~-------~~~~~~~~~~~~~-----~---------~~---~~~~~~~~~~~~~~~~~~i~~r~~~  209 (406)
T 1s1f_A          155 AVICE-LMGVPATDR-------HSMHTWTQLILSS-----S---------HG---AEVSERAKNEMNAYFSDLIGLRSDS  209 (406)
T ss_dssp             HHHHH-HHTCCGGGH-------HHHHHHHHHHHHH-----H---------TT---CCCCHHHHTHHHHHHHHHHHTSCCS
T ss_pred             HHHHH-HhCCCHHHH-------HHHHHHHHHHHhc-----c---------CC---HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            99998 599875421       2333322222110     0         00   1133455667777888888776543


Q ss_pred             h-hhhHhhhh---------HHHHHHHHHHHhCCCcchhhhhhccC---------CCHHHHhhcHHHHHHHHHhhcCCCCC
Q 012990          263 M-HDFQEEYT---------SEKIVQEVKEATGAKDISDFLKVAGC---------ISEEALEKMHYLHAAITETLRLYPAV  323 (452)
Q Consensus       263 ~-~~l~~~~l---------~~~l~~Ei~~~~~~~~~~~~~~~~~~---------~~~~~~~~lp~l~a~i~E~lRl~p~~  323 (452)
                      . +++++.++         .+++..++...+.++ .++.......         ....-.++..|++|+|+|+||++|++
T Consensus       210 ~~~d~l~~ll~~~~~~~ls~~el~~~~~~l~~AG-eTt~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~  288 (406)
T 1s1f_A          210 AGEDVTSLLGAAVGRDEITLSEAVGLAVLLQIGG-EAVTNNSGQMFHLLLSRPELAERLRSEPEIRPRAIDELLRWIPHR  288 (406)
T ss_dssp             CCCSHHHHHHHHHHTTSSCHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHSHHHHHHHHHCGGGHHHHHHHHHHHSCCB
T ss_pred             CCCCHHHHHHHhhcccCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHCHHHHHHHHhCHHHHHHHHHHHHhhCCCc
Confidence            2 12333222         455556665555444 3322111100         01122234569999999999999999


Q ss_pred             C--CCccccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcc
Q 012990          324 P--VDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLG  401 (452)
Q Consensus       324 ~--~~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G  401 (452)
                      +  ...|.+.+|+++ +||.|||||.|.++.+++|+||++| +||++|+||||.           ..++|||.|+|.|+|
T Consensus       289 ~~~~~~R~~~~d~~i-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~~~FG~G~r~C~G  355 (406)
T 1s1f_A          289 NAVGLSRIALEDVEI-KGVRIRAGDAVYVSYLAANRDPEVF-PDPDRIDFERSP-----------NPHVSFGFGPHYCPG  355 (406)
T ss_dssp             SSCCCCEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTC-------------CCCCTTCCSTTCCTT
T ss_pred             cccCcceEeCCCEEE-CCEEECCCCEEEeCcHHhcCCcccC-CCcceeCCCCCC-----------CCCCCCCCCCCCCcC
Confidence            9  788888888777 9999999999999999999999999 999999999995           248999999999999


Q ss_pred             hHHHHHHHHHHHHHhhcce-eEEEecCCccccccceeeEecCCceeEEEe
Q 012990          402 KEFAYRQMKIYSAVLLSCF-KFRLRNVSETVNYRTMINLHIDGGLHVRVF  450 (452)
Q Consensus       402 ~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  450 (452)
                      ++||++|++++++.|+++| ++++.++..++.+..+.+.+...+++|++.
T Consensus       356 ~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~  405 (406)
T 1s1f_A          356 GMLARLESELLVDAVLDRVPGLKLAVAPEDVPFKKGALIRGPEALPVTWH  405 (406)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCSSCSBCCBSCCEEECC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCcEeCCCCccceeccCcccCCcceeEEeeC
Confidence            9999999999999999999 799987544555566667778889999874


No 40 
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=1.3e-49  Score=370.43  Aligned_cols=354  Identities=15%  Similarity=0.167  Sum_probs=257.5

Q ss_pred             hHHHHHHHHHHhhC-CeEEec-CCceeEEecChhhHHHHHhcccccCCCCc-chHHHH-----------HHhc-CCeeEe
Q 012990           56 RLHHYMTDLAAKHG-TYRLLG-PFRSEVYSSDPANVEYMLKTNFDNYGKGS-YNYSIL-----------KDLL-GDGIFT  120 (452)
Q Consensus        56 ~~~~~~~~~~~~yG-~~~~~~-~~~~~vvv~~pe~~~~il~~~~~~~~~~~-~~~~~~-----------~~~~-g~~i~~  120 (452)
                      +++..+.++ ++|| ++++.. ++.++|+++||+++++|+.++.  +++.+ .+....           .... +.++++
T Consensus        18 ~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   94 (411)
T 1gwi_A           18 DLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPGRSMLT   94 (411)
T ss_dssp             CHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCCSSGGG
T ss_pred             ChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhcccccccc
Confidence            478888899 8999 577776 6788999999999999998652  34432 111110           0112 457788


Q ss_pred             cCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHH-HHhHHHHhhhccCCCCCCccC
Q 012990          121 VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFM-KSTLDSIFKVAFGVELDSVCG  199 (452)
Q Consensus       121 ~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~-~~~~~~i~~~~fG~~~~~~~~  199 (452)
                      .+|+.|+++|++++++|+.+.++.+.+ .+++.++++++.+.+   .+.++|+.+.+. .+++++++. +||.+.+.   
T Consensus        95 ~~g~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~---  166 (411)
T 1gwi_A           95 VDGAEHRRLRTLVAQALTVRRVEHMRG-RITELTDRLLDELPA---DGGVVDLKAAFAYPLPMYVVAD-LMGIEEAR---  166 (411)
T ss_dssp             CCHHHHHHHHHHHTTTSCHHHHHTTHH-HHHHHHHHHHHTSCC---SCCCEEHHHHTTTHHHHHHHHH-HHTCCGGG---
T ss_pred             CCcHHHHHHHHHHHHhcCHHHHHHHHH-HHHHHHHHHHHHHHH---cCCCcchHHHHhhHHHHHHHHH-HhCCCHHH---
Confidence            899999999999999999999999985 899999999988852   366899998887 499999996 69986532   


Q ss_pred             CCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhHhhhh-------
Q 012990          200 SNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM-HDFQEEYT-------  271 (452)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~l~~~~l-------  271 (452)
                          ...+.+.+......                 ....++..++.+.+.+++.++++++++.. .++++.++       
T Consensus       167 ----~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~  225 (411)
T 1gwi_A          167 ----LPRLKVLFEKFFST-----------------QTPPEEVVATLTELASIMTDTVAAKRAAPGDDLTSALIQASENGD  225 (411)
T ss_dssp             ----HHHHHHHHHHHHCT-----------------TSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBTTB
T ss_pred             ----HHHHHHHHHHHhcc-----------------CCChHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhcccCC
Confidence                12333332222110                 01123455667778888888888776432 22322221       


Q ss_pred             ---HHHHHHHHHHHhCCCcchhhhhhccC-------C--CHHHHhhcHHHHHHHHHhhcCCCCCCC-CccccccCCccCC
Q 012990          272 ---SEKIVQEVKEATGAKDISDFLKVAGC-------I--SEEALEKMHYLHAAITETLRLYPAVPV-DAKMCFSDDTLPD  338 (452)
Q Consensus       272 ---~~~l~~Ei~~~~~~~~~~~~~~~~~~-------~--~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~~~~~~~  338 (452)
                         .+++..++...+.++..++.......       +  ...-.++.+|++|||+|+||++|+++. ..|.+.+|+++ +
T Consensus       226 ~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~  304 (411)
T 1gwi_A          226 HLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGEAEWSAVVEETLRFSTPTSHVLIRFAAEDVPV-G  304 (411)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTSSCHHHHHHHHHHHSCSBCCEEEEEESSCEEE-T
T ss_pred             CCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhChHHHHHHHcChHHHHHHHHHHHHhCCcccCCceeeeCCCeEE-C
Confidence               44455555544433322211111000       0  011112346899999999999999986 78888888777 9


Q ss_pred             CeeecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhc
Q 012990          339 GFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLS  418 (452)
Q Consensus       339 g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~  418 (452)
                      ||.|||||.|+++.+++|+||++||+||++|+||||.          ...++|||.|+|.|+|++||++|++++++.|++
T Consensus       305 G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeRf~----------~~~~lpFG~G~r~C~G~~lA~~e~~~~l~~ll~  374 (411)
T 1gwi_A          305 DRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTS----------GNRHISFGHGPHVCPGAALSRMEAGVALPALYA  374 (411)
T ss_dssp             TEEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCC----------SSCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHH
T ss_pred             CEEECCCCEEEecHHHhcCChhhcCCChhhcCCCCCC----------CCCcccCCCCcccCCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999995          246899999999999999999999999999999


Q ss_pred             ce-eEEEecCCccccccceeeEecCCceeEEEeeC
Q 012990          419 CF-KFRLRNVSETVNYRTMINLHIDGGLHVRVFHR  452 (452)
Q Consensus       419 ~f-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  452 (452)
                      +| ++++..+..++.+....+.++..+++|++++|
T Consensus       375 ~f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~~r  409 (411)
T 1gwi_A          375 RFPHLDLAVPAAELRNKPVVTQNDLFELPVRLAHH  409 (411)
T ss_dssp             HCTTCEESSCGGGCCBCSCTTBCCBSCCEEESSCC
T ss_pred             hCccceeCCCcccccccccccccCcceeEEEecCC
Confidence            99 79987544455555556677888999999887


No 41 
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00  E-value=1.2e-49  Score=370.60  Aligned_cols=370  Identities=12%  Similarity=0.053  Sum_probs=264.1

Q ss_pred             ccCCCCCCCCCcc--cchHHhhhh--hhhHHHHHHHHHHhhC--C-eEEecCCceeEEecChhhHHHHHhcccccCCCCc
Q 012990           32 KSGNKQKKYHPIG--GTVFNQLLN--FNRLHHYMTDLAAKHG--T-YRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGS  104 (452)
Q Consensus        32 ~~~~pgP~~~p~~--G~~~~~~~~--~~~~~~~~~~~~~~yG--~-~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~  104 (452)
                      .+.||||++.|..  +.+-.+...  ..+++.++.+++ +||  + +++...+ +.++++|++++++|+.+. +.|++++
T Consensus        10 ~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g-~~vvv~~~~~v~~vl~~~-~~f~~~~   86 (415)
T 2zwu_A           10 ANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG-GHWIATRGQLIREAYEDY-RHFSSEC   86 (415)
T ss_dssp             -CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG-CEEEECSHHHHHHHHHCT-TTEETTS
T ss_pred             cccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC-CeEEEcCHHHHHHHHcCc-cccCCCc
Confidence            3889999998864  432111111  345788999995 688  6 5555233 689999999999999754 5677765


Q ss_pred             -chHHHHHHhcCCe-eEecCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhH-HHHh
Q 012990          105 -YNYSILKDLLGDG-IFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLF-MKST  181 (452)
Q Consensus       105 -~~~~~~~~~~g~~-i~~~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~-~~~~  181 (452)
                       .+. ......+.+ +++.+|+.|+++|++++++|+...++.+.+ .+++.++++++.+.+.   | ++|+.+.+ ..++
T Consensus        87 ~~~~-~~~~~~~~~~l~~~~g~~~~~~R~~~~~~f~~~~l~~~~~-~i~~~~~~l~~~l~~~---~-~~d~~~~~~~~~~  160 (415)
T 2zwu_A           87 PFIP-REAGEAYDFIPTSMDPPEQRQFRALANQVVGMPVVDKLEN-RIQELACSLIESLRPQ---G-QCNFTEDYAEPFP  160 (415)
T ss_dssp             CSSS-HHHHHHCCCTTTTCCTTTTHHHHHHHHHHHSHHHHHHHHH-HHHHHHHHHHHHHGGG---T-EEEHHHHTTTHHH
T ss_pred             ccCC-CCccccccccCccCCCcHHHHHHHHHHhhhCHHHHHHHHH-HHHHHHHHHHHHHHhc---C-CccHHHHHHHHHH
Confidence             222 222334677 888899999999999999999999999985 8999999999998652   2 79999865 7899


Q ss_pred             HHHHhhhccCCCCCCccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHh
Q 012990          182 LDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTD  261 (452)
Q Consensus       182 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  261 (452)
                      +++++.+ ||.+.+..       ..+.+....+...     .         .+.    +..++.+.+.+++..+++++++
T Consensus       161 ~~vi~~~-~G~~~~~~-------~~~~~~~~~~~~~-----~---------~P~----~~~~~~~~~~~~~~~~i~~r~~  214 (415)
T 2zwu_A          161 IRIFMLL-AGLPEEDI-------PHLKYLTDQMTRP-----D---------GSM----TFAEAKEALYDYLIPIIEQRRQ  214 (415)
T ss_dssp             HHHHHHH-HTCCGGGH-------HHHHHHHHHHHSC-----C---------SSS----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHH-cCCCHHHH-------HHHHHHHHHHHhc-----c---------CHH----HHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999 99876421       2333332222110     0         011    3445666777888888887765


Q ss_pred             hhh-hhHhhhh----------HHHHHHHHHHHhCCCcchhhhhhccC---------CCHHHHhhcHHHHHHHHHhhcCCC
Q 012990          262 QMH-DFQEEYT----------SEKIVQEVKEATGAKDISDFLKVAGC---------ISEEALEKMHYLHAAITETLRLYP  321 (452)
Q Consensus       262 ~~~-~l~~~~l----------~~~l~~Ei~~~~~~~~~~~~~~~~~~---------~~~~~~~~lp~l~a~i~E~lRl~p  321 (452)
                      +.. ++++.++          .+++..++...+.++..++.......         ....-.++..|++|+|+|+||++|
T Consensus       215 ~~~~dll~~ll~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p  294 (415)
T 2zwu_A          215 KPGTDAISIVANGQVNGRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACEELLRRFS  294 (415)
T ss_dssp             SCCSSHHHHHHTCEETTEECCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHTC
T ss_pred             CCCCCHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCHHHHHHHHhCHHHHHHHHHHHHhhcC
Confidence            321 2322221          44555555444433322111111000         001111234589999999999999


Q ss_pred             CCCCCccccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcc
Q 012990          322 AVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLG  401 (452)
Q Consensus       322 ~~~~~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G  401 (452)
                      +++.. |.+.+|+++ +||.|||||.|+++.+++|+||++| +||++|+||||-           ..++|||.|+|.|+|
T Consensus       295 ~~~~~-R~~~~d~~~-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~l~FG~G~r~C~G  360 (415)
T 2zwu_A          295 LVADG-RILTSDYEF-HGVQLKKGDQILLPQMLSGLDEREN-ACPMHVDFSRQK-----------VSHTTFGHGSHLCLG  360 (415)
T ss_dssp             CBCCE-EEESSCEEE-TTEEECTTCEEECCHHHHHHCTTTS-SSTTSCCTTCSS-----------CCCCTTCCGGGCCSS
T ss_pred             CcCCc-eeeCCCEEE-CCEEECCCCEEEeCchhhCCCchhC-CCccccCCCCCC-----------CCCCCCCCCCccCCC
Confidence            99987 988888777 9999999999999999999999999 999999999961           358999999999999


Q ss_pred             hHHHHHHHHHHHHHhhccee-EEEecCCccccccceeeEecCCceeEEEeeC
Q 012990          402 KEFAYRQMKIYSAVLLSCFK-FRLRNVSETVNYRTMINLHIDGGLHVRVFHR  452 (452)
Q Consensus       402 ~~lA~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  452 (452)
                      ++||++|++++++.|+++|+ +++.++ .+++ ....+..+..+++|++++|
T Consensus       361 ~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~-~~~~~~~~~~~lpv~~~~r  410 (415)
T 2zwu_A          361 QHLARREIIVTLKEWLTRIPDFSIAPG-AQIQ-HKSGIVSGVQALPLVWDPA  410 (415)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCSCEECTT-CCCC-EECSSBCEESCCEEECCGG
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCEECCC-cccc-cCCccccCcceeEEEEecC
Confidence            99999999999999999998 999762 2221 3445566777899999876


No 42 
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00  E-value=7e-49  Score=364.54  Aligned_cols=354  Identities=19%  Similarity=0.195  Sum_probs=255.0

Q ss_pred             hHHHHHHHHHHhhCCeEEecCCceeEEecChhhHHHHHhcccccCCCCcchHH--------HHHHhcCCeeEecCchhHH
Q 012990           56 RLHHYMTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYS--------ILKDLLGDGIFTVDGEKWR  127 (452)
Q Consensus        56 ~~~~~~~~~~~~yG~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~--------~~~~~~g~~i~~~~g~~w~  127 (452)
                      +++.++.++ ++||++...  +.+.++|+|++++++|+.+  ..|++++....        .+..+.+.++++.+|+.|+
T Consensus        14 ~p~~~~~~l-~~yGpv~~~--g~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~   88 (397)
T 3buj_A           14 DPYPSYHWL-LRHDPVHRG--AHRVWYVSRFADVRAVLGD--ERFARTGIRRFWTDLVGPGLLAEIVGDIILFQDEPDHG   88 (397)
T ss_dssp             CCHHHHHHH-HHHCSEEEC--GGGCEEECSHHHHHHHHTC--TTEESHHHHHHHHHHHCSSHHHHHHTTCGGGCCTTHHH
T ss_pred             CchHHHHHH-HhcCCeeeC--CCCeEEEcCHHHHHHHHcC--CCcccCcccccccccccccccccccccccccCCchhHH
Confidence            467778777 589954334  5789999999999999976  35666533211        1222337788888999999


Q ss_pred             HhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHh-HHHHhHHHHhhhccCCCCCCccCCCchhch
Q 012990          128 EQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDL-FMKSTLDSIFKVAFGVELDSVCGSNEEGTR  206 (452)
Q Consensus       128 ~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~-~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~  206 (452)
                      ++|++++++|+.+.++.+.+ .+++.++++++.+..    +.++|+... ...+++++++.+ ||.+.+..       ..
T Consensus        89 ~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~----~~~~dl~~~~~~~~~~~vi~~~-~G~~~~~~-------~~  155 (397)
T 3buj_A           89 RLRGVVGPAFSPSALRRLEP-VIAGTVDDLLRPALA----RGAMDVVDELAYPLALRAVLGL-LGLPAADW-------GA  155 (397)
T ss_dssp             HHHHHHGGGSSTTTTGGGHH-HHHHHHHHHHHHHHT----TTEEEHHHHTHHHHHHHHHHHH-HTCCGGGH-------HH
T ss_pred             HHHHHHHHhcCHHHHHHHHH-HHHHHHHHHHHHHhh----cCCeehHHHHHHHhHHHHHHHH-hCCCHHHH-------HH
Confidence            99999999999999999985 899999999999864    347998755 468999999998 99876421       22


Q ss_pred             HHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhHhhhh---------HHHHH
Q 012990          207 FSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM-HDFQEEYT---------SEKIV  276 (452)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~l~~~~l---------~~~l~  276 (452)
                      +.+....+...     +..      .++....++..++.+.+.+++.+.++++++.. +++++.++         .+++.
T Consensus       156 ~~~~~~~~~~~-----~~~------~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~ls~~ei~  224 (397)
T 3buj_A          156 VGRWSRDVGRT-----LDR------GASAEDMRRGHAAIAEFADYVERALARRRREGGEDLLALMLDAHDRGLMSRNEIV  224 (397)
T ss_dssp             HHHHHHHHHGG-----GCS------SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSHHHHHHHHHHTTSSCHHHHH
T ss_pred             HHHHHHHHHhh-----cCC------CCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHhhhcCCCCHHHHH
Confidence            33332222111     000      00111224455667778888888888776542 22333222         33444


Q ss_pred             HHHHHHhCCCcchhhhhhcc-------C--CCHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccCCCeeecCCCE
Q 012990          277 QEVKEATGAKDISDFLKVAG-------C--ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDM  347 (452)
Q Consensus       277 ~Ei~~~~~~~~~~~~~~~~~-------~--~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~Gt~  347 (452)
                      .++...+.++..++......       .  ....-.++..|++|+|+|+||++|+++...|.+.+|+++ +||.|||||.
T Consensus       225 ~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~-~g~~Ip~Gt~  303 (397)
T 3buj_A          225 STVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRPDLLAQAVEECLRYDPSVQSNTRQLDVDVEL-RGRRLRRDDV  303 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCGGGHHHHHHHHHHHSCSCCEEEEEESSCEEE-TTEEECTTCE
T ss_pred             HHHHHHHHcCchHHHHHHHHHHHHHHhCHHHHHHHhhCHHHHHHHHHHHHhhcCcccCcceEECCCEEE-CCEEECCCCE
Confidence            44444443332222111100       0  011112234699999999999999999888888888777 9999999999


Q ss_pred             EEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcce-eEEEec
Q 012990          348 VCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF-KFRLRN  426 (452)
Q Consensus       348 v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~  426 (452)
                      |.++.+++||||++| +||++|+||||.           ..++|||.|+|.|+|++||++|++++++.| ++| ++++.+
T Consensus       304 V~~~~~~~~rdp~~~-~dp~~F~PeR~~-----------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~l-~~f~~~~~~~  370 (397)
T 3buj_A          304 VVVLAGAANRDPRRY-DRPDDFDIERDP-----------VPSMSFGAGMRYCLGSYLARTQLRAAVAAL-ARLPGLRLGC  370 (397)
T ss_dssp             EEEEHHHHTTCTTTC-SSTTSCCTTSCC-----------CCCSTTCCGGGCCTTHHHHHHHHHHHHHHH-HTSTTCEESS
T ss_pred             EEEChhhhCCCcccc-CCccccCCCCCC-----------CCCCCCCCCCccCCCHHHHHHHHHHHHHHH-hcCCCceeCC
Confidence            999999999999999 999999999994           247999999999999999999999999999 999 899977


Q ss_pred             CCccccccceeeEecCCceeEEEeeC
Q 012990          427 VSETVNYRTMINLHIDGGLHVRVFHR  452 (452)
Q Consensus       427 ~~~~~~~~~~~~~~~~~~~~v~~~~r  452 (452)
                      +..++.+..+.++++..+++|++++|
T Consensus       371 ~~~~~~~~~~~~~~~~~~l~v~~~~r  396 (397)
T 3buj_A          371 ASDALAYQPRTMFRGLASLPIAFTPG  396 (397)
T ss_dssp             CSTTCCBCSCSSCCCBSCCEEECCTT
T ss_pred             CCcccccccccccCCCcceeEEecCC
Confidence            53345555666778888999999987


No 43 
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00  E-value=1.3e-49  Score=370.70  Aligned_cols=351  Identities=15%  Similarity=0.120  Sum_probs=251.7

Q ss_pred             hHHHHHHHHHHhhC-CeEEec-CCceeEEecChhhHHHHHhcccccCCCCcc---hHH---HHHH--hcCCeeEecCchh
Q 012990           56 RLHHYMTDLAAKHG-TYRLLG-PFRSEVYSSDPANVEYMLKTNFDNYGKGSY---NYS---ILKD--LLGDGIFTVDGEK  125 (452)
Q Consensus        56 ~~~~~~~~~~~~yG-~~~~~~-~~~~~vvv~~pe~~~~il~~~~~~~~~~~~---~~~---~~~~--~~g~~i~~~~g~~  125 (452)
                      +++..+.++ ++|| ++++.+ ++.++|+++||+++++|+.++  .|++.+.   +..   +...  ..+.++++.+|+.
T Consensus        25 ~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~  101 (408)
T 3abb_A           25 QPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDP--RLSSDWGHPDFPVVVRRTEDRGGLAFPLIGVDDPV  101 (408)
T ss_dssp             SCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCT--TEECCTTSTTCCCCC---------CCTTTTCCTTH
T ss_pred             CchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCC--CcccccccccccccccCCccccccccccccCCchH
Confidence            467888999 8899 577776 688899999999999999864  2333221   110   1111  1234677789999


Q ss_pred             HHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHHH-HhHHHHhhhccCCCCCCccCCCchh
Q 012990          126 WREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMK-STLDSIFKVAFGVELDSVCGSNEEG  204 (452)
Q Consensus       126 w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~-~~~~~i~~~~fG~~~~~~~~~~~~~  204 (452)
                      |+++|++++++|+...++.+.+ .+++.++++++.+..   .|.++|+.+.+.. ++.++++. +||.+.+..       
T Consensus       102 h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~-------  169 (408)
T 3abb_A          102 HARQRRMLIPSFGVKRMNAIRP-RLQSLVDRLLDDMLA---KGPGADLVSAFALPVPSVAICE-LLGVPYGDH-------  169 (408)
T ss_dssp             HHHHHHHHGGGGCHHHHHHHHH-HHHHHHHHHHHHHHH---TCSCEEHHHHTTTHHHHHHHHH-HHTCCGGGH-------
T ss_pred             HHHHHHHhhhhcCHHHHHHHHH-HHHHHHHHHHHHHHh---cCCCeehHHHHHHHHHHHHHHH-HhCCCHHHH-------
Confidence            9999999999999999999985 899999999999974   3568999998874 88999997 699865321       


Q ss_pred             chHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhHhhhh----------HH
Q 012990          205 TRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM-HDFQEEYT----------SE  273 (452)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~l~~~~l----------~~  273 (452)
                      ..+.+.+......         .        .. ++..++.+.+.+++.++++++++.. +++++.++          .+
T Consensus       170 ~~~~~~~~~~~~~---------~--------~~-~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~ls~~  231 (408)
T 3abb_A          170 DFFEECSRNFVGA---------A--------TS-AEADAAFGELYTYLHGLVGRKQAEPEDGLLDELIARQLEEGDLDHD  231 (408)
T ss_dssp             HHHHHHHHHHC------------------------CCSSHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHTSSSCCHH
T ss_pred             HHHHHHHHHHhcc---------c--------ch-HHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhcccCCCCCCHH
Confidence            2333332221110         0        00 2233455667777777777766532 22333222          34


Q ss_pred             HHHHHHHHHhCCCcchhhhhhcc-------C--CCHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccCCCeeecC
Q 012990          274 KIVQEVKEATGAKDISDFLKVAG-------C--ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRK  344 (452)
Q Consensus       274 ~l~~Ei~~~~~~~~~~~~~~~~~-------~--~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~  344 (452)
                      ++..++...+.++..++......       .  ....-.++..|++|||+|+||++|+++...|.+.+|+++ +||.|||
T Consensus       232 ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~-~G~~Ip~  310 (408)
T 3abb_A          232 EVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPGAVSGVVEELLRFTSVSDHIVRMAKEDIEV-GGATIKA  310 (408)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGGGGGGSCHHHHHHHHHHHHHHHCSSCEEEEEESSCEEE-TTEEECT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCHHhHHHHHHHHHHhcCcccccceEeCCCeEE-CCEEECC
Confidence            45555554444332222111100       0  011111234689999999999999999888888888777 9999999


Q ss_pred             CCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcce-eEE
Q 012990          345 GDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF-KFR  423 (452)
Q Consensus       345 Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~  423 (452)
                      ||.|.++.+++|+||++| +||++|+||||           ...++|||.|+|.|+|++||++|++++++.|+++| +++
T Consensus       311 Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~-----------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~  378 (408)
T 3abb_A          311 GDAVLVSITLMNRDAKAY-ENPDIFDARRN-----------ARHHVGFGHGIHQCLGQNLARAELEIALGGLFARIPGLR  378 (408)
T ss_dssp             TCEEEEEHHHHHTCTTTS-SSTTSCCTTSC-----------CTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred             CCEEEeChHHhcCCcccC-CCcccCCCCCC-----------CCCCCCCCCCCcCCcCHHHHHHHHHHHHHHHHHhCccce
Confidence            999999999999999999 99999999996           23589999999999999999999999999999999 799


Q ss_pred             EecCCccccccceeeEecCCceeEEEeeC
Q 012990          424 LRNVSETVNYRTMINLHIDGGLHVRVFHR  452 (452)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  452 (452)
                      +..+..++.+....+.++..+++|++++|
T Consensus       379 ~~~~~~~~~~~~~~~~~~~~~lpv~~~~~  407 (408)
T 3abb_A          379 LAVPLDEVPIKAGHDAQGPIELPVVWHHH  407 (408)
T ss_dssp             ESSCGGGSCBCCTTSCCSBSCCEEECSCC
T ss_pred             ecCCccccccccCcccCCcceeEEEeCCC
Confidence            87544455555566677888999999876


No 44 
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00  E-value=1.3e-49  Score=369.82  Aligned_cols=352  Identities=14%  Similarity=0.152  Sum_probs=258.3

Q ss_pred             hHHHHHHHHHHhhC-CeEEec-CCceeEEecChhhHHHHHhcccccCCCCcc--h-HH--HHHH-hcCCeeEecCchhHH
Q 012990           56 RLHHYMTDLAAKHG-TYRLLG-PFRSEVYSSDPANVEYMLKTNFDNYGKGSY--N-YS--ILKD-LLGDGIFTVDGEKWR  127 (452)
Q Consensus        56 ~~~~~~~~~~~~yG-~~~~~~-~~~~~vvv~~pe~~~~il~~~~~~~~~~~~--~-~~--~~~~-~~g~~i~~~~g~~w~  127 (452)
                      +++.++.++ ++|| ++++.. ++.+.++++|++++++|+.++  .|++++.  + ..  .+.. ..+.++++.+|+.|+
T Consensus        20 ~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~   96 (403)
T 3aba_A           20 LPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGSLLWQDEPEHT   96 (403)
T ss_dssp             SCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTCCTTCCTTHHH
T ss_pred             ChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--CcccccccccccccccccccccccccccCCchhHH
Confidence            367788888 8898 577776 788999999999999999864  4655421  1 10  0112 135678788999999


Q ss_pred             HhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHH-HHhHHHHhhhccCCCCCCccCCCchhch
Q 012990          128 EQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFM-KSTLDSIFKVAFGVELDSVCGSNEEGTR  206 (452)
Q Consensus       128 ~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~-~~~~~~i~~~~fG~~~~~~~~~~~~~~~  206 (452)
                      ++|++++++|+.+.++.+.+ .+++.++++++.+.+   .+.++|+...+. .+++++++. +||.+.+..       ..
T Consensus        97 ~~R~~~~~~fs~~~l~~~~~-~i~~~~~~ll~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~-------~~  164 (403)
T 3aba_A           97 SDRKLLAKEFTVRRMQALRP-NIQRIVDEHLDAIEA---RGGPVDLVKTFANAVPSMVISD-LFGVPVERR-------AE  164 (403)
T ss_dssp             HHHHHHHHHSCHHHHHTTHH-HHHHHHHHHHHHHHH---HCSCEEHHHHTTTHHHHHHHHH-HHTCCGGGH-------HH
T ss_pred             HHHHHHHhhcCHHHHHHHHH-HHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHH-HcCCCHHHH-------HH
Confidence            99999999999999999985 899999999999975   255799987664 699999998 699875321       22


Q ss_pred             HHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhHhhhh----------HHHH
Q 012990          207 FSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMH-DFQEEYT----------SEKI  275 (452)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~l~~~~l----------~~~l  275 (452)
                      +.+....+...               . .. .++..++.+.+.+++.+.++++++... ++++.++          .+++
T Consensus       165 ~~~~~~~~~~~---------------~-~~-p~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~l~~~ei  227 (403)
T 3aba_A          165 FQDIAEAMMRV---------------D-QD-AAATEAAGMRLGGLLYQLVQERRANPGDDLISALITTEDPDGVVDDMFL  227 (403)
T ss_dssp             HHHHHHHHSBS---------------S-SC-HHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHTSCCTTCCCSHHHH
T ss_pred             HHHHHHHHHhc---------------c-Cc-HHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhhccCCCCCCHHHH
Confidence            22222211100               0 01 144556777788888888888765422 2332222          4555


Q ss_pred             HHHHHHHhCCCcchhhhhhcc-------C--CCHHHHhhcHHHHHHHHHhhcCCCCCC-CCccccccCCccCCCeeecCC
Q 012990          276 VQEVKEATGAKDISDFLKVAG-------C--ISEEALEKMHYLHAAITETLRLYPAVP-VDAKMCFSDDTLPDGFSVRKG  345 (452)
Q Consensus       276 ~~Ei~~~~~~~~~~~~~~~~~-------~--~~~~~~~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~~~~~~~g~~ip~G  345 (452)
                      ..++...+.++..++......       .  ....-.++..|++|||+|+||++|+++ ...|.+.+|+++ +||.||||
T Consensus       228 ~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~Ip~G  306 (403)
T 3aba_A          228 MNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLREDPSLVGNAVEELLRYLTIGQFGGERVATRDVEL-GGVRIAKG  306 (403)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGGGHHHHHHHHHHHHCSCTTCEEEEESSCEEE-TTEEECTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHHHHHHHHHHHhcCCCcccccceEeCCCeEE-CCEEECCC
Confidence            555555544433222111100       0  011112235689999999999999999 678888888777 99999999


Q ss_pred             CEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcce-eEEE
Q 012990          346 DMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF-KFRL  424 (452)
Q Consensus       346 t~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~  424 (452)
                      |.|.++.+++|+||++| +||++|+||||.           ..++|||.|+|.|+|++||++|++++++.|+++| ++++
T Consensus       307 t~V~~~~~~~~rdp~~~-~dp~~F~PeR~~-----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l  374 (403)
T 3aba_A          307 EQVVAHVLAADFDPAFV-EEPERFDITRRP-----------APHLAFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRL  374 (403)
T ss_dssp             CEEEECHHHHTTCTTTS-SSTTSCCTTSCC-----------CCCSTTCCGGGSCTTHHHHHHHHHHHHHHHHHHSTTCEE
T ss_pred             CEEEechhhhCCChhhC-CCccccCCCCCC-----------CCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCcee
Confidence            99999999999999999 999999999983           3589999999999999999999999999999999 5998


Q ss_pred             ecCCccccccceeeEecCCceeEEEeeC
Q 012990          425 RNVSETVNYRTMINLHIDGGLHVRVFHR  452 (452)
Q Consensus       425 ~~~~~~~~~~~~~~~~~~~~~~v~~~~r  452 (452)
                      ..+..++.+..+.+.++..+++|++++|
T Consensus       375 ~~~~~~~~~~~~~~~~~~~~lpv~~~~r  402 (403)
T 3aba_A          375 AKPVEELRFRHDMVFYGVHELPVTWHHH  402 (403)
T ss_dssp             SSCGGGSCBCTTBSSCCBSCCEEECCCC
T ss_pred             cCCccccccccCcccCCcceeEEEecCC
Confidence            7654455566667778888999999887


No 45 
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00  E-value=6.7e-49  Score=365.42  Aligned_cols=351  Identities=15%  Similarity=0.125  Sum_probs=256.7

Q ss_pred             hhHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccCCCCcchH-H----H-HHHhcCCeeEecCchhHH
Q 012990           55 NRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNY-S----I-LKDLLGDGIFTVDGEKWR  127 (452)
Q Consensus        55 ~~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~-~----~-~~~~~g~~i~~~~g~~w~  127 (452)
                      .+++.++.++ ++|| ++++..++.+.+++++++.+++|+.++ . |++++... .    . +....+.++++.+|+.|+
T Consensus        20 ~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~-f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~   96 (411)
T 3a4g_A           20 QNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDP-R-LSKDWRHTLPEDQRADMPATPTPMMILMDPPDHT   96 (411)
T ss_dssp             TCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCT-T-EESCGGGGSCGGGCTTCCSCSSCCGGGCCTTHHH
T ss_pred             cCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCC-C-cccccccccccccccccCcccccccccCCchHHH
Confidence            3478889999 8898 577777888999999999999999876 3 77764321 0    0 111135678888999999


Q ss_pred             HhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHh-HHHHhHHHHhhhccCCCCCCccCCCchhch
Q 012990          128 EQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDL-FMKSTLDSIFKVAFGVELDSVCGSNEEGTR  206 (452)
Q Consensus       128 ~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~-~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~  206 (452)
                      ++|++++++|+.+.++.+.+ .+++.++++++.+.+    +.++|+... ...+++++++.+ ||.+.+..       ..
T Consensus        97 ~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~----~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~~-------~~  163 (411)
T 3a4g_A           97 RLRKLVGRSFTVRRMNELEP-RITEIADGLLAGLPT----DGPVDLMREYAFQIPVQVICEL-LGVPAEDR-------DD  163 (411)
T ss_dssp             HHHHHHHTTCCHHHHHHHHH-HHHHHHHHHHHHSCS----SSCEEHHHHTTTTHHHHHHHHH-HTCCGGGH-------HH
T ss_pred             HHHHHhhhhhCHHHHHHHHH-HHHHHHHHHHHHHHh----cCCccHHHHHHHHhHHHHHHHH-hCCCHHHH-------HH
Confidence            99999999999999999985 889999999988853    357999755 468999999975 89875421       22


Q ss_pred             HHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhHhhhh-----------HHH
Q 012990          207 FSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMH-DFQEEYT-----------SEK  274 (452)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~l~~~~l-----------~~~  274 (452)
                      +.+....+...               .+   .++..++.+.+.+++.+.++++++... ++++.++           .++
T Consensus       164 ~~~~~~~~~~~---------------~p---~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~~ls~~e  225 (411)
T 3a4g_A          164 FSAWSSVLVDD---------------SP---ADDKNAAMGKLHGYLSDLLERKRTEPDDALLSSLLAVSDEDGDRLSQEE  225 (411)
T ss_dssp             HHHHHHHHTTS---------------SC---TTTHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCCTTCCCCCHHH
T ss_pred             HHHHHHHHhcc---------------CC---HHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhccCCCCCCHHH
Confidence            33222211110               00   123445667777888888887765422 2322221           445


Q ss_pred             HHHHHHHHhCCCcchhhhhhccC---------CCHHHHhhcHHHHHHHHHhhcCCCCCC-CCccccccCCccCCCeeecC
Q 012990          275 IVQEVKEATGAKDISDFLKVAGC---------ISEEALEKMHYLHAAITETLRLYPAVP-VDAKMCFSDDTLPDGFSVRK  344 (452)
Q Consensus       275 l~~Ei~~~~~~~~~~~~~~~~~~---------~~~~~~~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~~~~~~~g~~ip~  344 (452)
                      +..++...+.++..++.......         ....-.++..|++|||+|+||++|+++ ...|.+.+|+++ +||.|||
T Consensus       226 i~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l-~G~~Ip~  304 (411)
T 3a4g_A          226 LVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPSLISSAVEEFLRFDSPVSQAPIRFTAEDVTY-SGVTIPA  304 (411)
T ss_dssp             HHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGGGHHHHHHHHHHHTCSBCBCCCEEESSCEEE-TTEEECT
T ss_pred             HHHHHHHHHHhchhhHHHHHHHHHHHHHhCHHHHHHHhcCHHHHHHHHHHHHHhcccccCCceeEeCCCEEE-CCEEECC
Confidence            55555555444332221111000         011112245699999999999999999 688888888777 9999999


Q ss_pred             CCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcce-eEE
Q 012990          345 GDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF-KFR  423 (452)
Q Consensus       345 Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~  423 (452)
                      ||.|.++.+++||||++| +||++|+||||.           ..++|||.|+|.|+|++||++|++++++.|+++| +++
T Consensus       305 Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~  372 (411)
T 3a4g_A          305 GEMVMLGLAAANRDADWM-PEPDRLDITRDA-----------SGGVFFGHGIHFCLGAQLARLEGRVAIGRLFADRPELA  372 (411)
T ss_dssp             TCEEEEBHHHHTTCTTTS-SSTTSCCTTSCC-----------TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred             CCEEEeChhhhCCChhhc-CCccccCCCCCC-----------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCcE
Confidence            999999999999999999 999999999983           3589999999999999999999999999999999 699


Q ss_pred             EecCCccccccceeeEecCCceeEEEeeC
Q 012990          424 LRNVSETVNYRTMINLHIDGGLHVRVFHR  452 (452)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  452 (452)
                      +..+..++.+....++++..+++|++++|
T Consensus       373 l~~~~~~~~~~~~~~~~~~~~lpv~~~~r  401 (411)
T 3a4g_A          373 LAVGLDELVYRESTLVRGLSRMPVTMGPR  401 (411)
T ss_dssp             ESSCGGGCCBCCCTTBCCBSCCEEECCCC
T ss_pred             ECCCccccccccCccccCcceeEEEecCc
Confidence            87644455555566677788999999876


No 46 
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00  E-value=8.6e-49  Score=365.03  Aligned_cols=353  Identities=17%  Similarity=0.116  Sum_probs=254.0

Q ss_pred             hhHHHHHHHHHHhhCC-e-----EEecCCceeEEecChhhHHHHHhcccccCCCCcchH-----HHH-HHhcCCeeEecC
Q 012990           55 NRLHHYMTDLAAKHGT-Y-----RLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNY-----SIL-KDLLGDGIFTVD  122 (452)
Q Consensus        55 ~~~~~~~~~~~~~yG~-~-----~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~-----~~~-~~~~g~~i~~~~  122 (452)
                      .+++.++.+++ +||+ +     .+..  .+.++|+||+++++|+.++ ..|++++...     ..+ ....+.++++.+
T Consensus        25 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~  100 (414)
T 2uuq_A           25 PNPWPMYRALR-DHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHDTPPMVMQD  100 (414)
T ss_dssp             TCCHHHHHHHH-HHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSSSCCGGGCC
T ss_pred             cCchHHHHHHH-hcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCcccccccccccccccCC
Confidence            34788888885 6886 4     3444  5789999999999999876 6677764321     011 113367788889


Q ss_pred             chhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHH-HhHHHHhHHHHhhhccCCCCCCccCCC
Q 012990          123 GEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQ-DLFMKSTLDSIFKVAFGVELDSVCGSN  201 (452)
Q Consensus       123 g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~-~~~~~~~~~~i~~~~fG~~~~~~~~~~  201 (452)
                      |+.|+++|++++++|+++.++.+.+ .+++.++++++.+.+.   | .+|+. +.+..+++++++. +||.+.+..    
T Consensus       101 g~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~ll~~l~~~---~-~vdl~~~~~~~~~~~vi~~-~~G~~~~~~----  170 (414)
T 2uuq_A          101 PPVHTEFRKLVSRGFTPRQVETVEP-TVRKFVVERLEKLRAN---G-GGDIVTELFKPLPSMVVAH-YLGVPEEDW----  170 (414)
T ss_dssp             TTHHHHHHHHHHTTSSHHHHHHHHH-HHHHHHHHHHHHHHHT---T-EEEHHHHTTTHHHHHHHHH-HTTCCGGGH----
T ss_pred             chhHHHHHHHhhhhcCHHHHHHHHH-HHHHHHHHHHHHHHhc---C-CccHHHHHHHHhHHHHHHH-HhCCCHHHH----
Confidence            9999999999999999999999985 8999999999999762   2 59997 5567999999999 689876421    


Q ss_pred             chhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhHhhhh---------
Q 012990          202 EEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM-HDFQEEYT---------  271 (452)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~l~~~~l---------  271 (452)
                         ..+.+....+...   ..+.         +..  .+..++.+.+.+++.+.+++++++. +++++.++         
T Consensus       171 ---~~~~~~~~~~~~~---~~~~---------p~~--~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~~  233 (414)
T 2uuq_A          171 ---TQFDGWTQAIVAA---NAVD---------GAT--TGALDAVGSMMAYFTGLIERRRTEPADDAISHLVAAGVGADGD  233 (414)
T ss_dssp             ---HHHHHHHHHHHHH---HHC----------------CCHHHHHHHHHHHHHHHHHHTTSCCSSHHHHHHHTTTTCTTC
T ss_pred             ---HHHHHHHHHHHhh---cccC---------Cch--hHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhcccccCCC
Confidence               2333333222211   0000         100  1234556677788888888776532 12322222         


Q ss_pred             ---HHHHHHHHHHHhCCCcchhhhhhcc-------C--CCHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccCCC
Q 012990          272 ---SEKIVQEVKEATGAKDISDFLKVAG-------C--ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDG  339 (452)
Q Consensus       272 ---~~~l~~Ei~~~~~~~~~~~~~~~~~-------~--~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g  339 (452)
                         .+++..++...+.++..++......       .  ....-.++.+|++|+|+|+||++|+++...|.+.+|+++ +|
T Consensus       234 ~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~G  312 (414)
T 2uuq_A          234 TAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDPEGIPDAVEELLRLTSPVQGLARTTTRDVTI-GD  312 (414)
T ss_dssp             HHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGGGHHHHHHHHHHHHCSBCCEEEEESSCEEE-TT
T ss_pred             CCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHHHHHHHHHHHHHhCCCcCCcceEECCCEEE-CC
Confidence               3445555555544433222111100       0  011222346799999999999999999888888888777 99


Q ss_pred             eeecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcc
Q 012990          340 FSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSC  419 (452)
Q Consensus       340 ~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~  419 (452)
                      |.|||||.|.++.+++|+||++||+||++|+||||.           ..++|||.|+|.|+|++||++|++++++.|+++
T Consensus       313 ~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeR~~-----------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~  381 (414)
T 2uuq_A          313 TTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCP-----------RNILTFSHGAHHCLGAAAARMQCRVALTELLAR  381 (414)
T ss_dssp             EEECTTCEEEECHHHHTTCHHHHCTTTTSCCTTCCC-----------CSCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHH
T ss_pred             EEECCCCEEEeChhhhCCCHHHhCCCchhcCCCCCC-----------CCCcCCCCCCccCCCHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999984           248999999999999999999999999999999


Q ss_pred             e-eEEEecCCccccccceeeEecCCceeEEEeeC
Q 012990          420 F-KFRLRNVSETVNYRTMINLHIDGGLHVRVFHR  452 (452)
Q Consensus       420 f-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  452 (452)
                      | ++++.++  ++.+....++++..+++|++++|
T Consensus       382 f~~~~l~~~--~~~~~~~~~~~~~~~lpv~~~~r  413 (414)
T 2uuq_A          382 CPDFEVAES--RIVWSGGSYVRRPLSVPFRVTSS  413 (414)
T ss_dssp             CCSEEECGG--GCEECCCSSBCCEEECEEEEC--
T ss_pred             CcccEECCC--CccccccccccCcceeEEEecCC
Confidence            9 6999742  44555566777888999999876


No 47 
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=2.2e-48  Score=362.36  Aligned_cols=354  Identities=18%  Similarity=0.174  Sum_probs=254.7

Q ss_pred             hhHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccCCCCcc--hH---HHH------HHhcCCeeEecC
Q 012990           55 NRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSY--NY---SIL------KDLLGDGIFTVD  122 (452)
Q Consensus        55 ~~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~--~~---~~~------~~~~g~~i~~~~  122 (452)
                      .+++..+.++ ++|| ++++.+++.+.|+++||+++++|+.++  .+++++.  +.   ...      ....+.++++.+
T Consensus        15 ~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   91 (408)
T 1odo_A           15 ADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSS--DVSKDARAHWPAFGEVVGTWPLALWVAVENMFTAY   91 (408)
T ss_dssp             TTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCT--TEESCHHHHCTTHHHHTTTCTTTHHHHCCSGGGCC
T ss_pred             CChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCC--CcccccccccccccccccccccccccccccccccC
Confidence            3578889999 9999 577777788899999999999999865  2344331  11   110      011346788889


Q ss_pred             chhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHH-HHhHHHHhhhccCCCCCCccCCC
Q 012990          123 GEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFM-KSTLDSIFKVAFGVELDSVCGSN  201 (452)
Q Consensus       123 g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~-~~~~~~i~~~~fG~~~~~~~~~~  201 (452)
                      |+.|+++|++++++|+...++.+.+ .+++.++++++.+.+. ..|.++|+.+.+. .+++++++. +||.+.+.     
T Consensus        92 g~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~~-~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-----  163 (408)
T 1odo_A           92 GPNHRKLRRLVAPAFSARRVDAMRP-AVEAMVTGLVDRLAEL-PAGEPVDLRQELAYPLPIAVIGH-LMGVPQDR-----  163 (408)
T ss_dssp             HHHHHHHHHTTGGGGSHHHHHHHHH-HHHHHHHHHHHHHHHS-CTTSCEEHHHHTTTHHHHHHHHH-HHTCCHHH-----
T ss_pred             ChHHHHHHHHhhhhcCHHHHHHHHH-HHHHHHHHHHHHHHhh-cCCCCcchHHHHhhhhHHHHHHH-HhCCCHHH-----
Confidence            9999999999999999999999985 8999999999999753 2366899999887 499999996 69976431     


Q ss_pred             chhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhHhhhh---------
Q 012990          202 EEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMH-DFQEEYT---------  271 (452)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~l~~~~l---------  271 (452)
                        ...+.+.+......                 ....++..++.+.+.+++..++++++++.. ++++.++         
T Consensus       164 --~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~~  224 (408)
T 1odo_A          164 --RDGFRALVDGVFDT-----------------TLDQAEAQANTARLYEVLDQLIAAKRATPGDDMTSLLIAARDDEGDG  224 (408)
T ss_dssp             --HHHHHHHHHHHHCT-----------------TCCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHCC----
T ss_pred             --HHHHHHHHHHHhcc-----------------cCCHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHhccccccc
Confidence              12233222221110                 011234456666777777777777654321 2222221         


Q ss_pred             ----HHHHHHHHHHHhCCCcchhhhhhccC-------C--CHHHHhhcHHHHHHHHHhhcCCCCCCC-CccccccCCccC
Q 012990          272 ----SEKIVQEVKEATGAKDISDFLKVAGC-------I--SEEALEKMHYLHAAITETLRLYPAVPV-DAKMCFSDDTLP  337 (452)
Q Consensus       272 ----~~~l~~Ei~~~~~~~~~~~~~~~~~~-------~--~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~~~~~~  337 (452)
                          .+++..++...+.++..++.......       +  ...-.++.+|++|||+|+||++|+++. ..|.+.+|+++ 
T Consensus       225 ~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l-  303 (408)
T 1odo_A          225 DRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGEVTWADVVEETLRHEPAVKHLPLRYAVTDIAL-  303 (408)
T ss_dssp             -CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHTSSCHHHHHHHHHHHSCSBSCEEEEEESSCEEC-
T ss_pred             CCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHHHHHHHHHHHhhCCCccCCcceEeCCCeEc-
Confidence                33444444444433322111111000       0  001112345799999999999999996 78888888776 


Q ss_pred             C-CeeecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHh
Q 012990          338 D-GFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVL  416 (452)
Q Consensus       338 ~-g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~l  416 (452)
                      + ||.|||||.|.++.+++||||++| +||++|+||||           ...++|||.|+|.|+|++||++|++++++.|
T Consensus       304 ~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~-----------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~l  371 (408)
T 1odo_A          304 PDGRTIARGEPILASYAAANRHPDWH-EDADTFDATRT-----------VKEHLAFGHGVHFCLGAPLARMEVTLALESL  371 (408)
T ss_dssp             TTSCEECTTCEEEECHHHHTTCTTTS-TTTTSCCTTCS-----------CCCCCTTCSSTTSCTTHHHHHHHHHHHHHHH
T ss_pred             CCCcEECCCCEEEeChhhhcCChhhc-CCccccCCCCC-----------CCCCCCCCCCCccCCCHHHHHHHHHHHHHHH
Confidence            8 999999999999999999999999 99999999994           2368999999999999999999999999999


Q ss_pred             hcce-eEEEecCCccccccceeeEecCCceeEEEee
Q 012990          417 LSCF-KFRLRNVSETVNYRTMINLHIDGGLHVRVFH  451 (452)
Q Consensus       417 l~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  451 (452)
                      +++| ++++..+..++.+....++++..+++|++++
T Consensus       372 l~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~  407 (408)
T 1odo_A          372 FGRFPDLRLADPAEELPPVPSLISNGHQRLPVLLHA  407 (408)
T ss_dssp             HHHCTTCEESCTTSCCCBCSCSSBCCBSCCEEECC-
T ss_pred             HHhCCcceecCCccccccccCccccCcccceEEecC
Confidence            9999 7999754445666667778888899999876


No 48 
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00  E-value=9.3e-49  Score=366.09  Aligned_cols=355  Identities=15%  Similarity=0.146  Sum_probs=251.8

Q ss_pred             hHHHHHHHHHHhhC-CeEEecC--CceeEEecChhhHHHHHhcccccCCCCcc--------hHHH-------HHHhcCCe
Q 012990           56 RLHHYMTDLAAKHG-TYRLLGP--FRSEVYSSDPANVEYMLKTNFDNYGKGSY--------NYSI-------LKDLLGDG  117 (452)
Q Consensus        56 ~~~~~~~~~~~~yG-~~~~~~~--~~~~vvv~~pe~~~~il~~~~~~~~~~~~--------~~~~-------~~~~~g~~  117 (452)
                      +++.++.++++ || ++++.+|  +.+.++|+||+.+++|+.++  .|++++.        ....       +....+.+
T Consensus        21 ~p~~~~~~l~~-~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (425)
T 2z3t_A           21 DPYPVYRRYRE-AAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVENW   97 (425)
T ss_dssp             CCHHHHHHHHH-HCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHTTC
T ss_pred             ChHHHHHHHHh-cCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccccccccccc
Confidence            47888888865 88 5677766  67899999999999999864  6776542        1111       22333578


Q ss_pred             eEecCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhH-HHHhHHHHhhhccCCCCCC
Q 012990          118 IFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLF-MKSTLDSIFKVAFGVELDS  196 (452)
Q Consensus       118 i~~~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~  196 (452)
                      +++.+|+.|+++|++++++|+.+.++.+.+ .+++.++++++.+.+   .| ++|+...+ ..+++++++.+ ||.+.+.
T Consensus        98 l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~ll~~l~~---~g-~~dl~~~~~~~~~~~vi~~~-~G~~~~~  171 (425)
T 2z3t_A           98 LVFLDPPHHTELRSLLTTEFSPSIVTGLRP-RIAELASALLDRLRA---QR-RPDLVEGFAAPLPILVISAL-LGIPEED  171 (425)
T ss_dssp             GGGCCHHHHHHHHHHHHGGGSHHHHHHHHH-HHHHHHHHHHHHHTT---SS-SCBHHHHTTTHHHHHHHHHH-HTCCGGG
T ss_pred             cccCCchHHHHHHHHHHHhhCHHHHHHHHH-HHHHHHHHHHHHHHh---cC-CccHHHHHHHHHHHHHHHHH-hCCCHHH
Confidence            888999999999999999999999999985 899999999999864   23 78998754 78999999998 9987642


Q ss_pred             ccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhHhhhh----
Q 012990          197 VCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM-HDFQEEYT----  271 (452)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~l~~~~l----  271 (452)
                      .       ..+.+....+...     +..+ +    ++....++..++.+.+.+++.+.+++++++. +++++.++    
T Consensus       172 ~-------~~~~~~~~~~~~~-----~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~  234 (425)
T 2z3t_A          172 H-------TWLRANAVALQEA-----STTR-A----RDGRGYARAEAASQEFTRYFRREVDRRGGDDRDDLLTLLVRARD  234 (425)
T ss_dssp             H-------HHHHHHHHHHHTT-----CTTC-C----C---HHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHH
T ss_pred             H-------HHHHHHHHHHHhh-----cccc-C----CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhc
Confidence            1       2333332222111     0000 0    0111234556677778888888887765432 22333222    


Q ss_pred             ------HHHHHHHHHHHhCCCcchhhhhhccC---------CCHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCcc
Q 012990          272 ------SEKIVQEVKEATGAKDISDFLKVAGC---------ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL  336 (452)
Q Consensus       272 ------~~~l~~Ei~~~~~~~~~~~~~~~~~~---------~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~  336 (452)
                            .+++..++...+.++..++.......         ....-.++..|++|||+|+||++|+++...|.+.+|+++
T Consensus       235 ~~~~ls~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l  314 (425)
T 2z3t_A          235 TGSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPESTPAAVEELMRYDPPVQAVTRWAYEDIRL  314 (425)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHSCSBCEEEEEESSCEEE
T ss_pred             cCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhChHhHHHHHHHHHHhCCcccCcceEeCCCeeE
Confidence                  44555555555544432221111100         011112245699999999999999999888888888777


Q ss_pred             CCCeeecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHh
Q 012990          337 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVL  416 (452)
Q Consensus       337 ~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~l  416 (452)
                       +||.|||||.|+++.+++|+||++| +||++|+||||.           ..++|||.|+|.|+|++||++|++++++.|
T Consensus       315 -~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~l  381 (425)
T 2z3t_A          315 -GDHDIPRGSRVVALLGSANRDPARF-PDPDVLDVHRAA-----------ERQVGFGLGIHYCLGATLARAEAEIGLRAL  381 (425)
T ss_dssp             -TTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTSCS-----------SCCCTTCCSTTCCTTHHHHHHHHHHHHHHH
T ss_pred             -CCEEECCCCEEEeChhhhCCCcccc-CCcccCCCCCCC-----------CCCCCCCCCCccCCCHHHHHHHHHHHHHHH
Confidence             9999999999999999999999999 999999999995           248999999999999999999999999999


Q ss_pred             hcce-eEEEecCCccccccceeeEecCCceeEEEee
Q 012990          417 LSCF-KFRLRNVSETVNYRTMINLHIDGGLHVRVFH  451 (452)
Q Consensus       417 l~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  451 (452)
                      +++| +|+ .++..+ .+....++++..+++|++++
T Consensus       382 l~~f~~~~-~~~~~~-~~~~~~~~~~~~~lpv~~~~  415 (425)
T 2z3t_A          382 LDGIPALG-RGAHEV-EYADDMVFHGPTRLLLDLPD  415 (425)
T ss_dssp             HHHCGGGG-SSCEEE-EECSCSSBCCEEEEEECCC-
T ss_pred             HHhCCcCc-cCCCcc-ccccccccCCcceeeEEecc
Confidence            9999 899 653322 44455666777788888765


No 49 
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00  E-value=2.5e-49  Score=368.05  Aligned_cols=352  Identities=14%  Similarity=0.150  Sum_probs=257.4

Q ss_pred             hhHHHHHHHHHHhhCC-eEEecCC--ceeEEecChhhHHHHHhcccccCCCCcchHH---HHHHhc---CCeeEecCchh
Q 012990           55 NRLHHYMTDLAAKHGT-YRLLGPF--RSEVYSSDPANVEYMLKTNFDNYGKGSYNYS---ILKDLL---GDGIFTVDGEK  125 (452)
Q Consensus        55 ~~~~~~~~~~~~~yG~-~~~~~~~--~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~---~~~~~~---g~~i~~~~g~~  125 (452)
                      +.++.++.+++ +||+ +++..++  .+.+++++|+.+++|+.++  .|++++....   .+....   +.++++.+|+.
T Consensus        27 ~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~  103 (411)
T 2dkk_A           27 PEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITNDP--RFGRAEVTQRQITRLAPHFKPRPGSLAFADQPD  103 (411)
T ss_dssp             SCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTCT--TEESGGGGGSCBCBSSSCCCCCTTCSTTCCTTH
T ss_pred             ccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcCC--CcccCCCCCCCccccccchhccccccccCCchH
Confidence            34557888887 7985 6666554  7799999999999999763  5666543210   111221   56778889999


Q ss_pred             HHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHH-HHhHHHHhhhccCCCCCCccCCCchh
Q 012990          126 WREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFM-KSTLDSIFKVAFGVELDSVCGSNEEG  204 (452)
Q Consensus       126 w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~-~~~~~~i~~~~fG~~~~~~~~~~~~~  204 (452)
                      |+++|++++++|++++++.+.+ .+++.++++++.+.+   .|+++|+.+.+. .+++++|+. +||.+.+..       
T Consensus       104 h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~---~g~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~-------  171 (411)
T 2dkk_A          104 HNRLRRAVAGAFTVGATKRLRP-RAQEILDGLVDGILA---EGPPADLVERVLEPFPIAVVSE-VMGVPAADR-------  171 (411)
T ss_dssp             HHHHHHHHGGGSSHHHHHHHHH-HHHHHHHHHHHHHHH---HCSCEEHHHHTTTHHHHHHHHH-HHTCCSSHH-------
T ss_pred             HHHHHHHhhHhhCHHHHHHHHH-HHHHHHHHHHHHHHh---cCCCeehHHHHHHHHHHHHHHH-HhCCCHHHH-------
Confidence            9999999999999999999985 899999999999976   255799998776 699999998 599876421       


Q ss_pred             chHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhHhhhh---------HHH
Q 012990          205 TRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMH-DFQEEYT---------SEK  274 (452)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~l~~~~l---------~~~  274 (452)
                      ..+.+....+...               .  ...++..++.+.+.+++..+++++++... ++++.++         .++
T Consensus       172 ~~~~~~~~~~~~~---------------~--~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~ls~~e  234 (411)
T 2dkk_A          172 ERVHSWTRQIIST---------------S--GGAEAAERAKRGLYGWITETVRARAGSEGGDVYSMLGAAVGRGEVGETE  234 (411)
T ss_dssp             HHHHHHHGGGCSS---------------C--SCSHHHHHHHHHHHHHHHHHHHTTTTCCSSCHHHHHHHHHHTTSSCTTS
T ss_pred             HHHHHHHHHHHhc---------------c--chHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhcCCCCCCHHH
Confidence            2222222211100               0  02244556777788888888887664322 2333222         234


Q ss_pred             HHHHHHHHhCCCcchhhhhhccC-------C--CHHHHhhcHHHHHHHHHhhcCCCCCC-C-CccccccCCccCCCeeec
Q 012990          275 IVQEVKEATGAKDISDFLKVAGC-------I--SEEALEKMHYLHAAITETLRLYPAVP-V-DAKMCFSDDTLPDGFSVR  343 (452)
Q Consensus       275 l~~Ei~~~~~~~~~~~~~~~~~~-------~--~~~~~~~lp~l~a~i~E~lRl~p~~~-~-~~r~~~~~~~~~~g~~ip  343 (452)
                      +..++...+.++ .++.......       +  ...-.++..|++++|+|+||++|+++ . ..|.+.+|.++ +|+.||
T Consensus       235 l~~~~~~l~~AG-eTta~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l-~G~~Ip  312 (411)
T 2dkk_A          235 AVGLAGPLQIGG-EAVTHNVGQMLYLLLTRRELMARMRERPGARGTALDELLRWISHRTSVGLARIALEDVEV-HGTRIA  312 (411)
T ss_dssp             HHHHHHHHHHTH-HHHHHHHHHHHHHHHHSHHHHHHHHHCTTCCHHHHHHHHHHSCCBSSCCCCEEESSCEEE-TTEEEC
T ss_pred             HHHHHHHHHHhh-HHHHHHHHHHHHHHHhCHHHHHHHHhCHHHHHHHHHHHHhhCCccccCccceEECCCEEE-CCEEEC
Confidence            444554444443 3222111100       0  11122345689999999999999999 7 78888888777 999999


Q ss_pred             CCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcce-eE
Q 012990          344 KGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF-KF  422 (452)
Q Consensus       344 ~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~  422 (452)
                      |||.|.++.+++|+||++| +||++|+|+||.           ..++|||.|+|.|+|++||++|++++++.|+++| ++
T Consensus       313 ~Gt~V~~~~~~~~rdp~~f-~dp~~F~PeR~~-----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~  380 (411)
T 2dkk_A          313 AGEPVYVSYLAANRDPDVF-PDPDRIDLDRDP-----------NPHLAYGNGHHFCTGAVLARMQTELLVDTLLERLPGL  380 (411)
T ss_dssp             TTCEEEECHHHHTTCTTTS-SSTTSCCCSCSS-----------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTC
T ss_pred             CCCEEEeChhhhcCChhhC-CCCCCCCCCCCC-----------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCCCc
Confidence            9999999999999999999 999999999995           3589999999999999999999999999999999 89


Q ss_pred             EEecCCccccccceeeEecCCceeEEEeeC
Q 012990          423 RLRNVSETVNYRTMINLHIDGGLHVRVFHR  452 (452)
Q Consensus       423 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  452 (452)
                      ++.++..++.+..+.++++..+++|++++|
T Consensus       381 ~l~~~~~~~~~~~~~~~~~~~~lpv~~~~R  410 (411)
T 2dkk_A          381 RLAVPAEQVAWRRKTMIRGPRTLPCTWHHH  410 (411)
T ss_dssp             EESSCGGGCCBCCSSSBCCBSCCEEECCCC
T ss_pred             EECCCccccccccCcccCCcceeEEEeccC
Confidence            997753345555566677888999999987


No 50 
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00  E-value=1.7e-48  Score=362.01  Aligned_cols=349  Identities=9%  Similarity=0.084  Sum_probs=256.2

Q ss_pred             hhHHHHHHHHHHhh--CC-eEEecCCceeEEecChhhHHHHHhcccccCCCCcchHH-HHHHhcCCeeEecCchhHHHhH
Q 012990           55 NRLHHYMTDLAAKH--GT-YRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYS-ILKDLLGDGIFTVDGEKWREQR  130 (452)
Q Consensus        55 ~~~~~~~~~~~~~y--G~-~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~-~~~~~~g~~i~~~~g~~w~~~R  130 (452)
                      .+++.++.+++++|  |+ +++..++ +.++|+|++.+++|+.+. +.|++++.... ......+.++++.+|+.|+++|
T Consensus        19 ~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R   96 (398)
T 4fb2_A           19 GTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVIQNT-KAFSNKGVTFPRYETGEFELMMAGQDDPVHKKYR   96 (398)
T ss_dssp             SSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHHTCC-SSEEGGGCSSSCC----CCCTTTTCCTTHHHHHH
T ss_pred             cChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHHhCh-hhccCCcccccCCCCcccccCcccCCchHHHHHH
Confidence            35789999999999  95 6666654 589999999999999543 67776544321 1111123456778999999999


Q ss_pred             hhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhH-HHHhHHHHhhhccCCCCCCccCCCchhchHHH
Q 012990          131 KISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLF-MKSTLDSIFKVAFGVELDSVCGSNEEGTRFSS  209 (452)
Q Consensus       131 ~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~  209 (452)
                      ++++++|+...++.+.+ .+++.++++++.+.+    +..+|+...+ ..++.++++. +||.+.+.       ...+.+
T Consensus        97 ~~~~~~f~~~~l~~~~~-~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-------~~~~~~  163 (398)
T 4fb2_A           97 QLVAKPFSPEATDLFTE-QLRQSTNDLIDARIE----LGEGDAATWLANEIPARLTAI-LLGLPPED-------GDTYRR  163 (398)
T ss_dssp             HHHHTTTCHHHHHTTHH-HHHHHHHHHHHTTTT----TTEEEHCCCCCTTHHHHHHHH-HTTSCGGG-------HHHHHH
T ss_pred             HHHHHhhCHHHHHHHHH-HHHHHHHHHHHHHhh----cCCccHHHHHHHHHHHHHHHH-HcCCCHHH-------HHHHHH
Confidence            99999999999999985 889999999988753    3358876555 6899999999 68976432       133333


Q ss_pred             hHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhHhhhh----------HHHHHHH
Q 012990          210 AFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMH-DFQEEYT----------SEKIVQE  278 (452)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~l~~~~l----------~~~l~~E  278 (452)
                      .+..+..                  .....+..++.+.+.+++.+.+++++++.. ++++.++          .+++..+
T Consensus       164 ~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~l~~~~i~~~  225 (398)
T 4fb2_A          164 WVWAITH------------------VENPEEGAEIFAELVAHARTLIAERRTNPGNDIMSRVIMSKIDGESLSEDDLIGF  225 (398)
T ss_dssp             HHHHHHH------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBTTBCCCHHHHHHH
T ss_pred             HHHHHhc------------------CCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHcccCCCCCCHHHHHHH
Confidence            3322221                  112235667778888899999988776432 2333322          5667777


Q ss_pred             HHHHhCCCcchhhhhhccC---------CCHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccCCCeeecCCCEEE
Q 012990          279 VKEATGAKDISDFLKVAGC---------ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC  349 (452)
Q Consensus       279 i~~~~~~~~~~~~~~~~~~---------~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~Gt~v~  349 (452)
                      +...+.++..++.......         ....-.++..|++|+|+|+||++|+++ ..|.+.+|+++ +||.|||||.|+
T Consensus       226 ~~~l~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~-~~R~~~~d~~l-~g~~Ip~Gt~V~  303 (398)
T 4fb2_A          226 FTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAHPELIPNAVDELLRFYGPAM-VGRLVTQEVTV-GDITMKPGQTAM  303 (398)
T ss_dssp             HHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHHCCBC-EEEEECSCEEE-TTEEECTTCEEE
T ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHHHHHHHHHHHHHhCCCcC-CCeeeCCCEEE-CCEEECCCCEEE
Confidence            7666666544332211100         011222345689999999999999999 89999998887 999999999999


Q ss_pred             EehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcce-eEEEecCC
Q 012990          350 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF-KFRLRNVS  428 (452)
Q Consensus       350 ~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~  428 (452)
                      ++.+++|+||++| +||++|+||||.           ..++|||.|+|.|+|++||++|+++++++|+++| +|++.++.
T Consensus       304 ~~~~~~~rdp~~~-~dp~~F~PeR~~-----------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~  371 (398)
T 4fb2_A          304 LWFPIASRDRSAF-DSPDNIVIERTP-----------NRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFSLDPNK  371 (398)
T ss_dssp             ECHHHHTTCTTTS-SSTTSCCTTCCS-----------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCCSCEECTTS
T ss_pred             echHhhcCChhhC-CCcCeeCCCCCC-----------CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcEECCCC
Confidence            9999999999999 999999999972           3589999999999999999999999999999999 99998754


Q ss_pred             ccccccceeeEecCCceeEEEeeC
Q 012990          429 ETVNYRTMINLHIDGGLHVRVFHR  452 (452)
Q Consensus       429 ~~~~~~~~~~~~~~~~~~v~~~~r  452 (452)
                       ++.+....+..+ ..++|++++|
T Consensus       372 -~~~~~~~~~~~~-~~lpv~~~~~  393 (398)
T 4fb2_A          372 -ECEWLMGQVAGM-LHVPIIFPKG  393 (398)
T ss_dssp             -CCEEECSSBCEE-EECEEECCCC
T ss_pred             -Cceecccccccc-ceeEEEEcCC
Confidence             333333333333 4688888765


No 51 
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00  E-value=2.8e-48  Score=361.17  Aligned_cols=349  Identities=15%  Similarity=0.146  Sum_probs=256.2

Q ss_pred             hHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccCCCCcch--H----H-----HH-HH---hcCCeeE
Q 012990           56 RLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYN--Y----S-----IL-KD---LLGDGIF  119 (452)
Q Consensus        56 ~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~--~----~-----~~-~~---~~g~~i~  119 (452)
                      +++.++.++ ++|| ++++..++.+.+++++|+.+++|+.++  .|++++..  .    .     .+ ..   ..+.+++
T Consensus        15 ~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   91 (404)
T 1z8o_A           15 DWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFATNMG   91 (404)
T ss_dssp             SHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSSSGG
T ss_pred             CcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhcccccc
Confidence            478889999 8998 577778888899999999999999875  46655321  1    0     11 22   2467788


Q ss_pred             ecCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhH-HHHhHHHHhhhccCCCCCCcc
Q 012990          120 TVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLF-MKSTLDSIFKVAFGVELDSVC  198 (452)
Q Consensus       120 ~~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~  198 (452)
                      +.+|+.|+++|++++++|+...++.+.+ .+++.++++++.+..    +.++|+...+ ..+++++++.+ ||.+.+.. 
T Consensus        92 ~~~g~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~-  164 (404)
T 1z8o_A           92 TSDPPTHTRLRKLVSQEFTVRRVEAMRP-RVEQITAELLDEVGD----SGVVDIVDRFAHPLPIKVICEL-LGVDEKYR-  164 (404)
T ss_dssp             GCCTTHHHHHHHHHHTTSCHHHHHHTHH-HHHHHHHHHHHTSCS----SSEEEHHHHTTTHHHHHHHHHH-TTCCGGGT-
T ss_pred             cCCCcHHHHHHHHHHHhhCHHHHHHHHH-HHHHHHHHHHHhhhh----cCCcchHHHHhHHHHHHHHHHH-hCCCHHHH-
Confidence            8899999999999999999999999985 889999999988752    5589998765 68999999985 99875421 


Q ss_pred             CCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhHhhhh------
Q 012990          199 GSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMH-DFQEEYT------  271 (452)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~l~~~~l------  271 (452)
                            ..+.+.+..+.. .     .+        +  ..++..++.+.+.+++.+.++++++... ++++.++      
T Consensus       165 ------~~~~~~~~~~~~-~-----~~--------p--~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~  222 (404)
T 1z8o_A          165 ------GEFGRWSSEILV-M-----DP--------E--RAEQRGQAAREVVNFILDLVERRRTEPGDDLLSALIRVQDDD  222 (404)
T ss_dssp             ------TTHHHHHHHHHC-C-----CG--------G--GHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCEETT
T ss_pred             ------HHHHHHHHHHhc-c-----CC--------h--hHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhhhccc
Confidence                  223333322211 0     00        1  1345566677788888888887765321 2222111      


Q ss_pred             -----HHHHHHHHHHHhCCCcchhhhhhccC---------CCHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccC
Q 012990          272 -----SEKIVQEVKEATGAKDISDFLKVAGC---------ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLP  337 (452)
Q Consensus       272 -----~~~l~~Ei~~~~~~~~~~~~~~~~~~---------~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~  337 (452)
                           .+++..++...+.++..++.......         ....-.++..|++|+|+|+||++|+++...|.+.+|+++ 
T Consensus       223 ~~~l~~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l-  301 (404)
T 1z8o_A          223 DGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVEEILRYIAPPETTTRFAAEEVEI-  301 (404)
T ss_dssp             TEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHTCSSCCEEEEESSCEEE-
T ss_pred             CCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHHhHHHHHHHHHHhcCCccCcceEECCCEEE-
Confidence                 44455555544443322221111000         011112234689999999999999999888888888777 


Q ss_pred             CCeeecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhh
Q 012990          338 DGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL  417 (452)
Q Consensus       338 ~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll  417 (452)
                      +||.|||||.|.++.+++||||++| +||++|+||||.           ..++|||.|+|.|+|++||++|++++++.|+
T Consensus       302 ~g~~Ip~Gt~V~~~~~~~~rd~~~~-~dP~~F~PeR~~-----------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll  369 (404)
T 1z8o_A          302 GGVAIPQYSTVLVANGAANRDPKQF-PDPHRFDVTRDT-----------RGHLSFGQGIHFCMGRPLAKLEGEVALRALF  369 (404)
T ss_dssp             TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTSCC-----------TTCCTTCSSTTCCTTHHHHHHHHHHHHHHHH
T ss_pred             CCEEECCCCEEEecchhhcCCcccC-CChhhcCCCCCC-----------CCccCCCCCCccCCcHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999 999999999983           2589999999999999999999999999999


Q ss_pred             cce-eEEEecCCccccccceeeEecCCceeEEE
Q 012990          418 SCF-KFRLRNVSETVNYRTMINLHIDGGLHVRV  449 (452)
Q Consensus       418 ~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  449 (452)
                      ++| ++++..+..++.+..+.++++..+++|++
T Consensus       370 ~~f~~~~l~~~~~~~~~~~~~~~~~~~~l~v~~  402 (404)
T 1z8o_A          370 GRFPALSLGIDADDVVWRRSLLLRGIDHLPVRL  402 (404)
T ss_dssp             HHCTTCEESSCGGGCCCCCCSSSCCCSCCEEET
T ss_pred             HhCCCcEecCCCCcceeccccccCCcceeEEEe
Confidence            999 59987644455566677778888899886


No 52 
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00  E-value=3.9e-48  Score=359.65  Aligned_cols=354  Identities=15%  Similarity=0.117  Sum_probs=255.3

Q ss_pred             hhHHHHHHHHHHhhCCeEEecCCceeEEecChhhHHHHHhcccccCCCCcchHHHHHHhcCCeeEecCchhHHHhHhhhh
Q 012990           55 NRLHHYMTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISS  134 (452)
Q Consensus        55 ~~~~~~~~~~~~~yG~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~g~~i~~~~g~~w~~~R~~l~  134 (452)
                      .+++.++.++++ ||++. +.+. ++++++||+++++|+.++ +.|++++...  .....+.++++.+|+.|+++|++++
T Consensus        18 ~~p~~~~~~l~~-~Gpv~-~~~~-~~vvv~~~~~v~~vl~~~-~~f~~~~~~~--~~~~~~~~l~~~~g~~h~~~R~~~~   91 (398)
T 2xkr_A           18 REARAAYRWMRA-NQPVF-RDRN-GLAAASTYQAVIDAERQP-ELFSNAGGIR--PDQPALPMMIDMDDPAHLLRRKLVN   91 (398)
T ss_dssp             TTHHHHHHHHHH-HCSEE-ECTT-CCEEECSHHHHHHHHTCT-TTEESTTCSS--TTSCCCSSGGGCCTTHHHHHHHHHG
T ss_pred             cChhHHHHHHHh-cCCee-ecCC-CeEEEecHHHHHHHHhCc-ccccCccccC--CcccccccccccCchHHHHHHHHhh
Confidence            457889999988 88643 3333 789999999999999775 4677764322  1223456788889999999999999


Q ss_pred             cCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHH-HhHHHHhHHHHhhhccCCCCCCccCCCchhchHHHhHhH
Q 012990          135 HEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQ-DLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDD  213 (452)
Q Consensus       135 ~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~-~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~  213 (452)
                      ++|++..++.+.+ .+++.++++++.+.+    +..+|+. +....+++++|+.+ ||.+.+..       ..+.+....
T Consensus        92 ~~fs~~~l~~~~~-~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~-------~~~~~~~~~  158 (398)
T 2xkr_A           92 AGFTRKRVKDKEA-SIAALCDTLIDAVCE----RGECDFVRDLAAPLPMAVIGDM-LGVRPEQR-------DMFLRWSDD  158 (398)
T ss_dssp             GGSCHHHHHTTHH-HHHHHHHHHHHTTTT----TSEEEHHHHTTTHHHHHHHHHH-HTCCGGGH-------HHHHHHHHH
T ss_pred             hhhCHHHHHHHHH-HHHHHHHHHHHhhhh----cCCccHHHHHHHHHHHHHHHHH-hCCCHHHH-------HHHHHHHHH
Confidence            9999999999985 889999999988854    2379999 45568999999998 99875421       334333333


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhHhhhh----------HHHHHHHHHHH
Q 012990          214 ASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM-HDFQEEYT----------SEKIVQEVKEA  282 (452)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~l~~~~l----------~~~l~~Ei~~~  282 (452)
                      +...     ..+.     +++ ...++..++.+.+.+++.+++++++++. .++++.++          .+++..++...
T Consensus       159 ~~~~-----~~~~-----~~p-~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~ls~~ei~~~~~~l  227 (398)
T 2xkr_A          159 LVTF-----LSSH-----VSQ-EDFQITMDAFAAYNDFTRATIAARRADPTDDLVSVLVSSEVDGERLSDDELVMETLLI  227 (398)
T ss_dssp             HHHH-----HTSC-----CCH-HHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBTTBCCCHHHHHHHHHHH
T ss_pred             HHhc-----cCcc-----cch-hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhccCCCCCHHHHHHHHHHH
Confidence            2211     0000     011 1234556677788889999988876542 22333222          45555555555


Q ss_pred             hCCCcchhhhhhccC---------CCHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccCCCeeecCCCEEEEehh
Q 012990          283 TGAKDISDFLKVAGC---------ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAY  353 (452)
Q Consensus       283 ~~~~~~~~~~~~~~~---------~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~Gt~v~~~~~  353 (452)
                      +.++..++.......         ....-.++..|++|+|+|+||++|+++...|.+.+|+++ +||.|||||.|+++.+
T Consensus       228 ~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~  306 (398)
T 2xkr_A          228 LIGGDETTRHTLSGGTEQLLRNRDQWDLLQRDPSLLPGAIEEMLRWTAPVKNMCRVLTADTEF-HGTALCAGEKMMLLFE  306 (398)
T ss_dssp             HHHHSHHHHHHHHHHHHHHHHSHHHHHHHHHCGGGHHHHHHHHHHHHCSBCEEEEEESSCEEE-TTEEECTTCEEEEEHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHHCHHHHHHHHhCHHHHHHHHHHHHhhcccccCcceEECCCeeE-CCEEECCCCEEEeChh
Confidence            544332221111000         011112234589999999999999999888888888777 9999999999999999


Q ss_pred             hhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcce-eEEEecCCcccc
Q 012990          354 AMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF-KFRLRNVSETVN  432 (452)
Q Consensus       354 ~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~  432 (452)
                      ++|+||++| +||++|+||||..           .++|||.|+|.|+|++||++|++++++.|+++| ++++.++ .+++
T Consensus       307 ~~~rdp~~~-~dP~~F~PeR~~~-----------~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~-~~~~  373 (398)
T 2xkr_A          307 SANFDEAVF-CEPEKFDVQRNPN-----------SHLAFGFGTHFCLGNQLARLELSLMTERVLRRLPDLRLVAD-DSVL  373 (398)
T ss_dssp             HHHTCTTTS-SSTTSCCTTCSSC-----------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESCT-TCCC
T ss_pred             hhcCChhhC-CCCCeeCCCCCCC-----------CCCcCCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCceECCC-ccee
Confidence            999999999 9999999999842           389999999999999999999999999999999 5999742 2221


Q ss_pred             -ccceeeEecCCceeEEEeeC
Q 012990          433 -YRTMINLHIDGGLHVRVFHR  452 (452)
Q Consensus       433 -~~~~~~~~~~~~~~v~~~~r  452 (452)
                       ...........+++|++++|
T Consensus       374 ~~~~~~~~~~~~~lpv~~~p~  394 (398)
T 2xkr_A          374 PLRPANFVSGLESMPVVFTPS  394 (398)
T ss_dssp             CBCCCSSBCCBSCCEEECCCC
T ss_pred             cccCcccccCccceeEEecCC
Confidence             13445566667899998765


No 53 
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00  E-value=3.3e-48  Score=361.16  Aligned_cols=350  Identities=16%  Similarity=0.206  Sum_probs=253.9

Q ss_pred             hHHHHHHHHHHhhC-CeEEec-CCceeEEecChhhHHHHHhcccccCCCCcch-HH--HHHH-hcCCeeEecCchhHHHh
Q 012990           56 RLHHYMTDLAAKHG-TYRLLG-PFRSEVYSSDPANVEYMLKTNFDNYGKGSYN-YS--ILKD-LLGDGIFTVDGEKWREQ  129 (452)
Q Consensus        56 ~~~~~~~~~~~~yG-~~~~~~-~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~-~~--~~~~-~~g~~i~~~~g~~w~~~  129 (452)
                      +++.++.++ ++|| ++++.. ++.+.++++||+.+++|+.++  .|.+++.. ..  .+.. ..+.++++.+|+.|+++
T Consensus        38 ~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~  114 (417)
T 2y5n_A           38 TLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGGLLSMDPPEHSRL  114 (417)
T ss_dssp             CCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCSGGGCCTTHHHHH
T ss_pred             CchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCcccccccCccCCchHHHHH
Confidence            467888899 8898 577776 688999999999999999864  46655432 10  0111 13566788899999999


Q ss_pred             HhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHH-HHhHHHHhhhccCCCCCCccCCCchhchHH
Q 012990          130 RKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFM-KSTLDSIFKVAFGVELDSVCGSNEEGTRFS  208 (452)
Q Consensus       130 R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~-~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~  208 (452)
                      |++++++|+.+.++.+.+ .+++.++++++.+..   ++.++|+.+.+. .+++++++. +||.+.+..       ..+.
T Consensus       115 R~~l~~~fs~~~l~~~~~-~i~~~~~~ll~~l~~---~~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~~-------~~~~  182 (417)
T 2y5n_A          115 RRLVVKAFTARRAESLRP-RAREIAHELVDQMAA---TGQPADLVAMFARQLPVRVICE-LLGVPSADH-------DRFT  182 (417)
T ss_dssp             HHHHHHHSCHHHHHHTHH-HHHHHHHHHHHHHHH---HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGGH-------HHHH
T ss_pred             HHHHhhhcCHHHHHHHHH-HHHHHHHHHHHHHHh---CCCCeeHHHHHHHHhHHHHHHH-HcCCCHHHH-------HHHH
Confidence            999999999999999985 899999999999974   223799987764 699999998 689865321       2222


Q ss_pred             HhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhHhhhh----------HHHHHH
Q 012990          209 SAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMH-DFQEEYT----------SEKIVQ  277 (452)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~l~~~~l----------~~~l~~  277 (452)
                      +....+...               .. ...++..++.+.+.+++.++++++++... ++++.++          .+++..
T Consensus       183 ~~~~~~~~~---------------~~-~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~ls~~ei~~  246 (417)
T 2y5n_A          183 RWSGAFLST---------------AE-VTAEEMQEAAEQAYAYMGDLIDRRRKEPTDDLVSALVQARDQQDSLSEQELLD  246 (417)
T ss_dssp             HHHHTTSTT---------------CC-CCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBTTBCCCHHHHHH
T ss_pred             HHHHHHhcc---------------cC-CCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhhhccCCCCCHHHHHH
Confidence            222111100               00 11245566777788888888887765421 2322222          444555


Q ss_pred             HHHHHhCCCcchhhhhhccC---------CCHHHHhhcHHHHHHHHHhhcCCCCCC--CCccccccCCccCCCeeecCCC
Q 012990          278 EVKEATGAKDISDFLKVAGC---------ISEEALEKMHYLHAAITETLRLYPAVP--VDAKMCFSDDTLPDGFSVRKGD  346 (452)
Q Consensus       278 Ei~~~~~~~~~~~~~~~~~~---------~~~~~~~~lp~l~a~i~E~lRl~p~~~--~~~r~~~~~~~~~~g~~ip~Gt  346 (452)
                      ++...+.++..++.......         +...-.++..|++|||+|+||++|+++  ...|.+.+|+++ +||.|||||
T Consensus       247 ~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l-~G~~Ip~Gt  325 (417)
T 2y5n_A          247 LAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPELIPSAVEELTRWVPLGVGTAFPRYAVEDVTL-RGVTIRAGE  325 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHCCCBSSCCSCEEESSCEEE-TTEEECTTC
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHHHHHHHHHHHHhcCCccccccceEeCCCEEE-CCEEECCCC
Confidence            55544433322211111000         011112234689999999999999999  688888888777 999999999


Q ss_pred             EEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcce-eEEEe
Q 012990          347 MVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF-KFRLR  425 (452)
Q Consensus       347 ~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~  425 (452)
                      .|.++.+++|+||++| +||++|+||||.           ..++|||.|+|.|+|++||++|++++++.|+++| ++++.
T Consensus       326 ~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~  393 (417)
T 2y5n_A          326 PVLASTGAANRDQAQF-PDADRIDVDRTP-----------NQHLGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLG  393 (417)
T ss_dssp             EEEECHHHHTTCTTTS-TTTTSCCTTCSS-----------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEES
T ss_pred             EEEeChhhhCCCcccC-CCccccCCCCCC-----------CCcCCCCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCcEeC
Confidence            9999999999999999 999999999983           3589999999999999999999999999999999 59987


Q ss_pred             cCCccccccceeeEecCCceeEEE
Q 012990          426 NVSETVNYRTMINLHIDGGLHVRV  449 (452)
Q Consensus       426 ~~~~~~~~~~~~~~~~~~~~~v~~  449 (452)
                      ++..++.+..+.+++....++|++
T Consensus       394 ~~~~~~~~~~~~~~~~~~~lpv~~  417 (417)
T 2y5n_A          394 IPETQLRWSEGMLLRGPLELPVVW  417 (417)
T ss_dssp             SCGGGCCBCCCSSBCCBSCCEEEC
T ss_pred             CCCccceeccCcccCCcceeEEeC
Confidence            654455566666777778888874


No 54 
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00  E-value=2.1e-49  Score=371.93  Aligned_cols=363  Identities=16%  Similarity=0.157  Sum_probs=249.3

Q ss_pred             hHHHHHHHHHHhhCC-eEEecCCceeEEecChhhHHHHHhcccccCCCCcchHHHHHHhcCC-eeEecCchhHHHhHhhh
Q 012990           56 RLHHYMTDLAAKHGT-YRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGD-GIFTVDGEKWREQRKIS  133 (452)
Q Consensus        56 ~~~~~~~~~~~~yG~-~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~g~-~i~~~~g~~w~~~R~~l  133 (452)
                      +++.++.++ ++||+ +++..++  .++|++|+.+++|+.++ +.|++++... ......+. ++++.||+.|+++|+++
T Consensus        54 ~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~-~~f~~~~~~~-~~~~~~~~~~l~~~dg~~h~~~Rr~~  128 (441)
T 3nc3_A           54 NPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHP-DIFTTKSLVE-RAEPVMRGPVLAQMHGKEHSAKRRIV  128 (441)
T ss_dssp             CGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCT-TTEECCCTTS-CCCCSCC-------------CCHHHH
T ss_pred             ChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCc-cccccccccc-ccccccCCCccccCCcHHHHHHHHHH
Confidence            466777776 57885 5544554  89999999999999876 4477654332 12223443 47888999999999999


Q ss_pred             hcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhH-HHHhHHHHhhhccCCCCCCccCCCchhchHHHhHh
Q 012990          134 SHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLF-MKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFD  212 (452)
Q Consensus       134 ~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~  212 (452)
                      +++|+++.++.+.+ .+++.++++++.+.+    +..+|+...+ ..++.++++. +||.+.+..       ..+.+...
T Consensus       129 ~~~fs~~~l~~~~~-~i~~~~~~ll~~l~~----~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~-------~~~~~~~~  195 (441)
T 3nc3_A          129 VRSFIGDALDHLSP-LIKQNAENLLAPYLE----RGKSDLVNDFGKTFAVCVTMD-MLGLDKRDH-------EKISEWHS  195 (441)
T ss_dssp             HHHHHHTHHHHHHH-HHHHHHHHHHTTTTT----TTEEECCCCCHHHHHHHHHHH-HTTCCGGGH-------HHHHHHHH
T ss_pred             HhhcCHHHHHHHHH-HHHHHHHHHHHHHHh----cCCCcHHHHHHHHHHHHHHHH-HcCCCHHHH-------HHHHHHHH
Confidence            99999999999985 889999999987753    4568875555 5689999998 589765321       33444333


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhHhhhh----------HHHHHHHHHH
Q 012990          213 DASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMH-DFQEEYT----------SEKIVQEVKE  281 (452)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~l~~~~l----------~~~l~~Ei~~  281 (452)
                      .+.........          .....+...++.+.+.+++..++++++.+.. ++++.++          .+++..++..
T Consensus       196 ~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~~~Dll~~Ll~~~~~~~~ls~~el~~~~~~  265 (441)
T 3nc3_A          196 GVADFITSISQ----------SPEARAHSLWCSEQLSQYLMPVIKERRVNPGSDLISILCTSEYEGMALSDKDILALILN  265 (441)
T ss_dssp             HHHHHHHCSCC----------CHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSSHHHHHCC------CCCHHHHHHHHHH
T ss_pred             HHHHhcccccC----------ChHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhccCCCCCHHHHHHHHHH
Confidence            33322110000          0011345567778889999999998876432 2333322          4556666555


Q ss_pred             HhCCCcchhhhhhccC---------CCHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccCCCeeecCCCEEEEeh
Q 012990          282 ATGAKDISDFLKVAGC---------ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQA  352 (452)
Q Consensus       282 ~~~~~~~~~~~~~~~~---------~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~Gt~v~~~~  352 (452)
                      .+.++..++.......         ....-.++++|++++|+|+||++|+++...|.+.+|+++ +|+.|||||.|.++.
T Consensus       266 ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~LRl~pp~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~  344 (441)
T 3nc3_A          266 VLLAATEPADKTLALMIYHLLNNPEQMNDVLADRSLVPRAIAETLRYKPPVQLIPRQLSQDTVV-GGMEIKKDTIVFCMI  344 (441)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCGGGHHHHHHHHHHHSCSBCEEEEEESSCEES-SSCEECTTCEEEEEH
T ss_pred             HHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHHHHHHHHHHhhhcCCcccCccEEECCCEEE-CCEEECCCCEEEech
Confidence            5544332221111000         011223457899999999999999999988888888777 999999999999999


Q ss_pred             hhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcce-eEEEecCCccc
Q 012990          353 YAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF-KFRLRNVSETV  431 (452)
Q Consensus       353 ~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~  431 (452)
                      +++||||++| +||++|||+||+.+..... .....++|||.|+|.|+|++||++|++++++.|+++| +|++.++  +.
T Consensus       345 ~~~~rdp~~f-~dP~~F~PeR~~~~~~~~~-~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~--~~  420 (441)
T 3nc3_A          345 GAANRDPEAF-EQPDVFNIHREDLGIKSAF-SGAARHLAFGSGIHNCVGTAFAKNEIEIVANIVLDKMRNIRLEED--FC  420 (441)
T ss_dssp             HHHHTCTTTS-SSTTSCCTTCTTSCGGGTT-SSSCSSCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHSTTCEECTT--CC
T ss_pred             HHhcCChhhC-CCcccCCCCCCCccccccc-CCCCCcccCCCCCccCCCHHHHHHHHHHHHHHHHHhCcccEECCC--Cc
Confidence            9999999999 9999999999976532211 1256799999999999999999999999999999999 8999865  33


Q ss_pred             cccceeeEecCCceeEEEee
Q 012990          432 NYRTMINLHIDGGLHVRVFH  451 (452)
Q Consensus       432 ~~~~~~~~~~~~~~~v~~~~  451 (452)
                      .+..+.+.+....++|+++|
T Consensus       421 ~~~~~~~~~~~~~lpv~~~~  440 (441)
T 3nc3_A          421 YAESGLYTRGPVSLLVAFDG  440 (441)
T ss_dssp             CCEECSSBCEESCCEEECC-
T ss_pred             ccccCccccCcceeEEEEec
Confidence            44555667777789999875


No 55 
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00  E-value=2.3e-48  Score=363.24  Aligned_cols=354  Identities=14%  Similarity=0.155  Sum_probs=257.8

Q ss_pred             hhHHHHHHHHHHhhCC-eEEecCCceeEEecChhhHHHHHhcccccCCCCcc-----hHHH--HHHh--c-CCeeEecCc
Q 012990           55 NRLHHYMTDLAAKHGT-YRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSY-----NYSI--LKDL--L-GDGIFTVDG  123 (452)
Q Consensus        55 ~~~~~~~~~~~~~yG~-~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~-----~~~~--~~~~--~-g~~i~~~~g  123 (452)
                      .+++.++.++ ++||+ +. + ++.+.++++|++++++|+.++ . |++++.     +...  ...+  . +.++++.+|
T Consensus        26 ~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~-~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g  100 (419)
T 1q5d_A           26 EDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDE-R-FAVSREEWESSAEYSSAIPELSDMKKYGLFGLPP  100 (419)
T ss_dssp             TCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCT-T-EECCGGGSTTHHHHHHSSGGGHHHHHHSTTTSCH
T ss_pred             hChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCC-C-ccccccccccccccccccchhhhhcccccccCCc
Confidence            3478888888 68985 55 4 667899999999999999876 3 887751     2111  1111  1 456777899


Q ss_pred             hhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHh-HHHHhHHHHhhhccCCCCCCccCCCc
Q 012990          124 EKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDL-FMKSTLDSIFKVAFGVELDSVCGSNE  202 (452)
Q Consensus       124 ~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~-~~~~~~~~i~~~~fG~~~~~~~~~~~  202 (452)
                      +.|+++|++++++|+...++.+.+ .+++.++++++.+..   .| ++|+... ...+++++|+.+ ||.+.+..     
T Consensus       101 ~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~ll~~l~~---~~-~~d~~~~~~~~~~~~vi~~~-fG~~~~~~-----  169 (419)
T 1q5d_A          101 EDHARVRKLVNPSFTSRAIDLLRA-EIQRTVDQLLDARSG---QE-EFDVVRDYAEGIPMRAISAL-LKVPAECD-----  169 (419)
T ss_dssp             HHHHHHHHHHGGGGSHHHHGGGHH-HHHHHHHHHHHHHTT---SS-CEETTTTTGGGSHHHHHHHH-TTCCGGGH-----
T ss_pred             hHHHHHHHHHHHhcCHHHHHHHHH-HHHHHHHHHHHHHHh---cC-CCCHHHHHHHHHHHHHHHHH-hCCCHHHH-----
Confidence            999999999999999999999985 899999999998864   23 7998865 489999999998 99876421     


Q ss_pred             hhchHHHhHhHHHHHHHHHHHHHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHHHHHHhhh-h-hhHhhhh-------
Q 012990          203 EGTRFSSAFDDASAMTLWRYVDIFWKIKKLLN--IGSEARLKQRIEVIDTFVYKIIRKKTDQM-H-DFQEEYT-------  271 (452)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~-~l~~~~l-------  271 (452)
                        ..+.+....+....     .+     .+++  ....++..++.+.+.+++.+.+++++++. + ++++.++       
T Consensus       170 --~~~~~~~~~~~~~~-----~~-----~~~P~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~dll~~ll~~~~~~~  237 (419)
T 1q5d_A          170 --EKFRRFGSATARAL-----GV-----GLVPRVDEETKTLVASVTEGLALLHGVLDERRRNPLENDVLTMLLQAEADGS  237 (419)
T ss_dssp             --HHHHHHHHHHHHHT-----TT-----TTSSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHSST
T ss_pred             --HHHHHHHHHHHHhc-----cc-----ccccCChHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHhhhccCC
Confidence              23333333322211     10     0011  12335566777888889999988876542 2 3433332       


Q ss_pred             ---HHHHHHHHHHHhCCCcchhhhhhccC---------CCHHHHhhcHHHHHHHHHhhcCCCCCC-CCccccccCCccCC
Q 012990          272 ---SEKIVQEVKEATGAKDISDFLKVAGC---------ISEEALEKMHYLHAAITETLRLYPAVP-VDAKMCFSDDTLPD  338 (452)
Q Consensus       272 ---~~~l~~Ei~~~~~~~~~~~~~~~~~~---------~~~~~~~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~~~~~~~  338 (452)
                         .+++..++...+.++..++.......         ....-.++.+|++|||+|+||++|+++ ...|.+.+|+++ +
T Consensus       238 ~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l-~  316 (419)
T 1q5d_A          238 RLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEPGLMRNALDEVLRFDNILRIGTVRFARQDLEY-C  316 (419)
T ss_dssp             TCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHSCSBSSEEEEEESSCEEE-T
T ss_pred             CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHHHHHHHHHHHHHhCCccccccceeeCCCeEE-C
Confidence               44455555555444432221111000         011112235699999999999999999 688888888776 9


Q ss_pred             CeeecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhc
Q 012990          339 GFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLS  418 (452)
Q Consensus       339 g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~  418 (452)
                      ||.||+||.|.++.+++||||++| +||++|+||||           ...++|||.|+|.|+|++||++|++++++.|++
T Consensus       317 G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~-----------~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~  384 (419)
T 1q5d_A          317 GASIKKGEMVFLLIPSALRDGTVF-SRPDVFDVRRD-----------TSASLAYGRGPHVCPGVSLARLEAEIAVGTIFR  384 (419)
T ss_dssp             TEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTSC-----------CTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHH
T ss_pred             CEEECCCCEEEecHHHhcCChhhC-CChhhcCCCCC-----------CCCCCCCCCCCCcCccHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999 99999999994           135899999999999999999999999999999


Q ss_pred             ce-eEEEecCCccccccceeeEecCCceeEEEeeC
Q 012990          419 CF-KFRLRNVSETVNYRTMINLHIDGGLHVRVFHR  452 (452)
Q Consensus       419 ~f-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  452 (452)
                      +| ++++.++   ..+....+.++..+++|++++|
T Consensus       385 ~f~~~~~~~~---~~~~~~~~~~~~~~l~v~~~~r  416 (419)
T 1q5d_A          385 RFPEMKLKET---PVFGYHPAFRNIESLNVILKPS  416 (419)
T ss_dssp             HCTTCEECSC---CEECCCSSBCCEEECEEESSCC
T ss_pred             hCCCeEECCC---cccccccccCCCceeEEEEecC
Confidence            99 7999764   2334455677778999999887


No 56 
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00  E-value=7.1e-48  Score=362.85  Aligned_cols=364  Identities=15%  Similarity=0.119  Sum_probs=257.6

Q ss_pred             hHHHHHHHHHHhhCC-e--EEe-cCCceeEEecChhhHHHHHhcccccCCCCcchH--------HHHHHh------cCCe
Q 012990           56 RLHHYMTDLAAKHGT-Y--RLL-GPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNY--------SILKDL------LGDG  117 (452)
Q Consensus        56 ~~~~~~~~~~~~yG~-~--~~~-~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~--------~~~~~~------~g~~  117 (452)
                      +++..+.++ ++||+ +  .+. .++.+.++|++++++++|+++. ..|++++...        ......      .+.+
T Consensus        46 ~p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~  123 (450)
T 3tkt_A           46 PLLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVES  123 (450)
T ss_dssp             HHHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCC
T ss_pred             CchHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccC
Confidence            378888888 56785 5  555 5678899999999999999776 6676654211        001111      3357


Q ss_pred             eEecCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhH-HHHhHHHHhhhccCCCCCC
Q 012990          118 IFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLF-MKSTLDSIFKVAFGVELDS  196 (452)
Q Consensus       118 i~~~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~  196 (452)
                      ++..||+.|+++|++++++|++++++.+.+ .+++.++++++.+.+   .+.++|+...+ ..+++++|+.+ ||.+.+.
T Consensus       124 l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~ll~~l~~---~~~~~dl~~~~~~~~~~~vi~~l-~G~~~~~  198 (450)
T 3tkt_A          124 LVQMDAPKHPKLRRLTQDWFMPKNLARLDG-EIRKIANEAIDRMLG---AGEEGDFMALVAAPYPLHVVMQI-LGVPPED  198 (450)
T ss_dssp             GGGCCTTHHHHHHHHHHTTTSHHHHGGGHH-HHHHHHHHHHHHHHH---TCSEEEHHHHTTTHHHHHHHHHH-TTCCGGG
T ss_pred             cccCCCHHHHHHHHHhhhhhCHHHHHHHHH-HHHHHHHHHHHHHHh---cCCCEeeHHHHHHHHHHHHHHHH-cCCChhH
Confidence            888899999999999999999999999985 899999999999975   26689998888 68999999986 8976432


Q ss_pred             ccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhHhhhh----
Q 012990          197 VCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMH-DFQEEYT----  271 (452)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~l~~~~l----  271 (452)
                             ...+.+....+....... ..+...+.. ......++..++.+.+.+++.+++++++++.. ++++.++    
T Consensus       199 -------~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~  269 (450)
T 3tkt_A          199 -------EPKMLFLTQQMFGGQDED-MNKSGLKDL-PPEQISQIVAGAVAEFERYFAGLAAERRRNPTDDVATVIANAVV  269 (450)
T ss_dssp             -------HHHHHHHHHTTSCCC------------------HHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHTCEE
T ss_pred             -------HHHHHHHHHHHhccccch-hhccccccc-cchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhccc
Confidence                   133333333322111000 000000000 01123456677888899999999998876533 2333322    


Q ss_pred             ------HHHHHHHHHHHhCCCcchhhhhhccC---------CCHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCcc
Q 012990          272 ------SEKIVQEVKEATGAKDISDFLKVAGC---------ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL  336 (452)
Q Consensus       272 ------~~~l~~Ei~~~~~~~~~~~~~~~~~~---------~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~  336 (452)
                            .+++..++...+.++..++.......         ....-.++.+|++++|+|+||++|+++...|.+++|+++
T Consensus       270 ~~~~ls~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~LRl~pp~~~~~R~~~~d~~l  349 (450)
T 3tkt_A          270 DGEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADRNLLPGIVEEAIRWTTPVQHFMRTAATDTEL  349 (450)
T ss_dssp             TTEECCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHHCSBCEEEEEESSSEEE
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCHHHHHHHHHHHHHhCCCccCcceeeCCCeeE
Confidence                  45566666555544433222111100         011222356799999999999999999888888888877


Q ss_pred             CCCeeecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHh
Q 012990          337 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVL  416 (452)
Q Consensus       337 ~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~l  416 (452)
                       +||.|||||.|+++.+++||||++| +||++|+||||           ...++|||.|+|.|+|++||++|++++++.|
T Consensus       350 -~G~~Ip~G~~V~~~~~~~~rDp~~~-~dP~~F~PeR~-----------~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~l  416 (450)
T 3tkt_A          350 -CGQKIAAGDWLMLNYVAANHDPAQF-PEPRKFDPTRP-----------ANRHLAFGAGSHQCLGLHLARLEMRVLLDVL  416 (450)
T ss_dssp             -TTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCTTSC-----------TTCSSTTCCSTTCCTTHHHHHHHHHHHHHHH
T ss_pred             -CCEEECCCCEEEEChHHhcCChhhC-CCcCeeCCCCC-----------CCCCCCCCCcCccCccHHHHHHHHHHHHHHH
Confidence             9999999999999999999999999 99999999995           2358999999999999999999999999999


Q ss_pred             hccee-EEEecCCccccccceeeEecCCceeEEEee
Q 012990          417 LSCFK-FRLRNVSETVNYRTMINLHIDGGLHVRVFH  451 (452)
Q Consensus       417 l~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  451 (452)
                      +++|+ +++.. +  ..+......+....++|++++
T Consensus       417 l~~f~~~~l~~-~--~~~~~~~~~~g~~~lpv~~~~  449 (450)
T 3tkt_A          417 LDRVDSLELAG-E--PKRVNSTFVGGFKSLPMRWKA  449 (450)
T ss_dssp             HHHEEEEEESS-C--CEECCCSSBCCEEECEEEEEE
T ss_pred             HHhCCCceeCC-C--cccccCcccCCcccceEEEec
Confidence            99998 66653 2  223333444555578998876


No 57 
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00  E-value=7e-48  Score=357.20  Aligned_cols=348  Identities=15%  Similarity=0.152  Sum_probs=252.3

Q ss_pred             hHHHHHHHHHHhhC-CeEEec-CCceeEEecChhhHHHHHhcccccCCCCcchHHHHHH-hcCCe--eEecCc------h
Q 012990           56 RLHHYMTDLAAKHG-TYRLLG-PFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKD-LLGDG--IFTVDG------E  124 (452)
Q Consensus        56 ~~~~~~~~~~~~yG-~~~~~~-~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~-~~g~~--i~~~~g------~  124 (452)
                      +++.++.++ ++|| ++++.+ ++.+.++|+||+++++|+.++  .|++++.....+.. ..+.+  +++.+|      +
T Consensus        27 ~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~  103 (404)
T 2xbk_A           27 KLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYVRSPFLDLLISDADAESGRR  103 (404)
T ss_dssp             BCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSSCCHHHHTTCBCSCHHHHHH
T ss_pred             CccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCcccccccccceeeCCCCCCCCc
Confidence            367788889 8899 577776 688999999999999999864  46655432211112 12445  777899      9


Q ss_pred             hHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhH-HHHhHHHHhhhccCCCCCCccCCCch
Q 012990          125 KWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLF-MKSTLDSIFKVAFGVELDSVCGSNEE  203 (452)
Q Consensus       125 ~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~  203 (452)
                      .|+++|++++++|+...++.+.+ .+++.++++++.+..   .|+++|+...+ ..+++++++. +||.+.+..      
T Consensus       104 ~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~ll~~l~~---~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~------  172 (404)
T 2xbk_A          104 QHAETRRLLTPLFSARRVLEMQP-KVEEAADTLLDAFIA---QGPPGDLHGELTVPFALTVLCE-VIGVPPQRR------  172 (404)
T ss_dssp             HHHHHHHHHGGGGCHHHHHHHHH-HHHHHHHHHHHHHHH---TCSSEEHHHHTHHHHHHHHHHH-HHTCCGGGH------
T ss_pred             hHHHHHHHhhhhcCHHHHHHHHH-HHHHHHHHHHHHHHh---cCCCeeHHHHHHHHHHHHHHHH-HhCCCHHHH------
Confidence            99999999999999999999985 899999999999974   35689998766 4699999997 789875321      


Q ss_pred             hchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhHhhh-----hHHHHHH
Q 012990          204 GTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM-HDFQEEY-----TSEKIVQ  277 (452)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~l~~~~-----l~~~l~~  277 (452)
                       ..+.+.+..+...     ..           ..  +..++.+.+.+++.+.++++++.. +++++.+     -.+++..
T Consensus       173 -~~~~~~~~~~~~~-----~~-----------~p--~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~l~~~~ls~~ei~~  233 (404)
T 2xbk_A          173 -AELTTLLAGIAKL-----DD-----------RE--GAVRAQDDLFGYVAGLVEHKRAEPGPDIISRLNDGELTEDRVAH  233 (404)
T ss_dssp             -HHHHHHHHHHTBS-----SC-----------HH--HHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHSSSCCHHHHHH
T ss_pred             -HHHHHHHHHHHhc-----cC-----------cH--HHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhhcCCCCHHHHHH
Confidence             2233322221110     00           00  345566777788888888776432 1222211     1344555


Q ss_pred             HHHHHhCCCcchhhhhhccC---------CCHHHHhhcHHHHHHHHHhhcCCCCCC--CCccccccCCccCCCeeecCCC
Q 012990          278 EVKEATGAKDISDFLKVAGC---------ISEEALEKMHYLHAAITETLRLYPAVP--VDAKMCFSDDTLPDGFSVRKGD  346 (452)
Q Consensus       278 Ei~~~~~~~~~~~~~~~~~~---------~~~~~~~~lp~l~a~i~E~lRl~p~~~--~~~r~~~~~~~~~~g~~ip~Gt  346 (452)
                      ++...+.++..++.......         ....-.++..|++|||+|+||++|+++  ...|.+.+|+++ +||.|||||
T Consensus       234 ~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l-~G~~Ip~Gt  312 (404)
T 2xbk_A          234 LAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALADPDVMARAVEEVLRTARAGGSVLPPRYASEDMEF-GGVTIRAGD  312 (404)
T ss_dssp             HHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHHHHHHHSCSSCCBCSCEEESSCEEE-TTEEECTTC
T ss_pred             HHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHhCHHHHHHHHHHHHHhCCCccccccceeECCCeeE-CCEEECCCC
Confidence            55444444332221111000         001111234589999999999999999  788988888777 999999999


Q ss_pred             EEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcce-eEEEe
Q 012990          347 MVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF-KFRLR  425 (452)
Q Consensus       347 ~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~  425 (452)
                      .|.++.+++|+||++| +||++|+||||.           ..++|||.|+|.|+|++||++|++++++.|+++| ++++.
T Consensus       313 ~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~  380 (404)
T 2xbk_A          313 LVLFDLGLPNFDERAF-TGPEEFDAARTP-----------NPHLTFGHGIWHCIGAPLARLELRTMFTKLFTRLPELRPE  380 (404)
T ss_dssp             EEECBTHHHHTCTTTS-SSTTSCCTTCSS-----------CCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHCTTCEES
T ss_pred             EEEeChHHhcCChhhC-CCccccCCCCCC-----------CCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCcceec
Confidence            9999999999999999 999999999983           3589999999999999999999999999999999 69997


Q ss_pred             cCCccccccceeeEecCCceeEEE
Q 012990          426 NVSETVNYRTMINLHIDGGLHVRV  449 (452)
Q Consensus       426 ~~~~~~~~~~~~~~~~~~~~~v~~  449 (452)
                      ++..++.+..+.+++....++|++
T Consensus       381 ~~~~~~~~~~~~~~~~~~~lpv~~  404 (404)
T 2xbk_A          381 LPVEQLRLKEGQLSGGFAELRVVW  404 (404)
T ss_dssp             SCGGGCCBCSSBTTCCBSCCEEEC
T ss_pred             CCCCcceeccCcccCCcceeeeeC
Confidence            654455566666777778888874


No 58 
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00  E-value=7.4e-48  Score=359.81  Aligned_cols=347  Identities=14%  Similarity=0.125  Sum_probs=251.4

Q ss_pred             hhHHHHHHHHHHhhC-CeEEecC-CceeEEecChhhHHHHHhcccccCCCCcc---hHHHHHH-----hcCCeeEecCch
Q 012990           55 NRLHHYMTDLAAKHG-TYRLLGP-FRSEVYSSDPANVEYMLKTNFDNYGKGSY---NYSILKD-----LLGDGIFTVDGE  124 (452)
Q Consensus        55 ~~~~~~~~~~~~~yG-~~~~~~~-~~~~vvv~~pe~~~~il~~~~~~~~~~~~---~~~~~~~-----~~g~~i~~~~g~  124 (452)
                      .+++.++.+++++ | ++++.++ |.+.++|++++++++|+.++  .|++++.   +..+...     ..+.++++.+|+
T Consensus        29 ~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~  105 (417)
T 3tyw_A           29 FAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIRTDAP  105 (417)
T ss_dssp             TSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGGCCHH
T ss_pred             cCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhhcCCc
Confidence            3478889999998 7 5777776 58999999999999999875  5555321   1111111     235678889999


Q ss_pred             hHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhH-HHHhHHHHhhhccCCCCCCccCCCch
Q 012990          125 KWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLF-MKSTLDSIFKVAFGVELDSVCGSNEE  203 (452)
Q Consensus       125 ~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~  203 (452)
                      .|+++|++++++|+.++++.+.+ .+++.++++++.+.+   .|+++|+...+ ..++.++++.+ ||.+.+..      
T Consensus       106 ~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~------  174 (417)
T 3tyw_A          106 EHTRYRRMLLPAFTVRRVRAMRP-AVQARVDEILDGMLA---AGGPVDLVSAYANAVSTSVICEL-LGIPRHDL------  174 (417)
T ss_dssp             HHHHHHHHHGGGGCHHHHHHTHH-HHHHHHHHHHHHHHH---HCSSEEHHHHTHHHHHHHHHHHH-HTCCTTTT------
T ss_pred             HHHHHHHHHHhhhCHHHHHHHHH-HHHHHHHHHHHHHHh---hCCCcchHHHHHHHHHHHHHHHH-hCCCHHHH------
Confidence            99999999999999999999995 899999999999976   35679999988 57899999987 89876531      


Q ss_pred             hchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhHhhhh----------H
Q 012990          204 GTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMH-DFQEEYT----------S  272 (452)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~l~~~~l----------~  272 (452)
                       ..+.+....+...                 ....++..++.+.+.+++..++++++++.. ++++.++          .
T Consensus       175 -~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~ls~  236 (417)
T 3tyw_A          175 -EFFRDVTRISGSR-----------------NSTAEQVSEALGGLFGLLGGLVAERREEPRDDLISKLVTDHLVPGNVTT  236 (417)
T ss_dssp             -THHHHHHHHHHSS-----------------SSCTTHHHHHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHTTTTTSSCH
T ss_pred             -HHHHHHHHHHhcc-----------------cCCHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHhcccCCCCCH
Confidence             2233222221110                 012235567777888888888888765432 2332222          3


Q ss_pred             HHHHHHHHHHhCCCcchhhhhhcc-------CC--CHHHHhhcHHHHHHHHHhhcCCCCCCC-CccccccCCccCCCeee
Q 012990          273 EKIVQEVKEATGAKDISDFLKVAG-------CI--SEEALEKMHYLHAAITETLRLYPAVPV-DAKMCFSDDTLPDGFSV  342 (452)
Q Consensus       273 ~~l~~Ei~~~~~~~~~~~~~~~~~-------~~--~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~~~~~~~g~~i  342 (452)
                      +++..++...+.++...+......       .+  ...-.++..|++|+|+|+||++|+++. ..|.+.+|.++ +||.|
T Consensus       237 ~el~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l-~G~~I  315 (417)
T 3tyw_A          237 EQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDPDLMPAAVDELLRVLSVADSIPLRVAAEDIEL-SGRTV  315 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHHHHHCGGGHHHHHHHHHHHHCSCTTCCEEEESSCEEC-SSCEE
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCHHHHHHHHhChHHHHHHHHHHHHhccccccCceeEeCCCeEE-CCEEE
Confidence            445555544443332211111100       00  112223456899999999999999998 57888888777 99999


Q ss_pred             cCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcce-e
Q 012990          343 RKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF-K  421 (452)
Q Consensus       343 p~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f-~  421 (452)
                      ||||.|+++.+++|+||++| +||++|+|+||.           ..++|||.|+|.|+|++||++|++++++.|+++| +
T Consensus       316 p~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp~  383 (417)
T 3tyw_A          316 PADDGVIALLAGANHDPEQF-DDPERVDFHRTD-----------NHHVAFGYGVHQCVGQHLARLELEVALETLLRRVPT  383 (417)
T ss_dssp             CTTCEEEECHHHHTTCTTTS-SSTTSCCTTCSC-----------CCCCTTCCSTTCCSCHHHHHHHHHHHHHHHHHHCTT
T ss_pred             CCCCEEEEehhhhcCChhhc-CCccccCCCCCC-----------CCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCc
Confidence            99999999999999999999 999999999993           3589999999999999999999999999999999 9


Q ss_pred             EEEecCCccccccceeeEecCCcee
Q 012990          422 FRLRNVSETVNYRTMINLHIDGGLH  446 (452)
Q Consensus       422 ~~~~~~~~~~~~~~~~~~~~~~~~~  446 (452)
                      |++..+..++.+..+..++....++
T Consensus       384 ~~l~~~~~~~~~~~~~~~~g~~~l~  408 (417)
T 3tyw_A          384 LRLAGERDQVVVKHDSATFGLEELM  408 (417)
T ss_dssp             CEECSCTTCCEECSSCSSCCEEECE
T ss_pred             ccccCCCccceeccCccccChhhcc
Confidence            9998654455555444444333343


No 59 
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00  E-value=1.6e-48  Score=365.64  Aligned_cols=370  Identities=12%  Similarity=0.070  Sum_probs=254.7

Q ss_pred             cCCCCCCCCCcccchHHhhhhhhhHHHHHHHHHHhhCC-eEEe--------cCCceeEEecChhhHHHHHhcccccCCCC
Q 012990           33 SGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHGT-YRLL--------GPFRSEVYSSDPANVEYMLKTNFDNYGKG  103 (452)
Q Consensus        33 ~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~-~~~~--------~~~~~~vvv~~pe~~~~il~~~~~~~~~~  103 (452)
                      ..||+|..+++.+.....   ..+++.++.++ ++||+ +++.        +|+.++++|++++++++|+++. ..|+++
T Consensus        18 ~~p~~~~~~~~~~~~~~~---~~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~-~~fs~~   92 (433)
T 3ivy_A           18 PSPNLPPGFDFTDPAIYA---ERLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHS-DVFSSY   92 (433)
T ss_dssp             --CCCCTTCCTTCHHHHT---TCCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCT-TTEEST
T ss_pred             CCCCCCCCCCCCCHHHhh---cCCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcCh-hhccCC
Confidence            456677777776643321   23478899999 77885 6666        3347899999999999999765 567654


Q ss_pred             cchHH---------HHHHhcCCeeEecCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHH
Q 012990          104 SYNYS---------ILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQ  174 (452)
Q Consensus       104 ~~~~~---------~~~~~~g~~i~~~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~  174 (452)
                      +....         ......+.+++..+|+.|+++|++++++|+++.++.+.+ .+++.++++++.+..    +..+|+.
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~ll~~l~~----~~~~d~~  167 (433)
T 3ivy_A           93 ENGVIPRFKNDIAREDIEVQRFVMLNMDAPHHTRLRKIISRGFTPRAVGRLHD-ELQERAQKIAAEAAA----AGSGDFV  167 (433)
T ss_dssp             TTCSCCCCCTTCCHHHHHGGGGSGGGCCTTHHHHHHHHHGGGSCHHHHHTTHH-HHHHHHHHHHHHHHH----HCEEEHH
T ss_pred             cccccccccccccccccccccCCccccChHHHHHHHHHHHHhhCHHHHHHHHH-HHHHHHHHHHHHHhh----CCCeeHH
Confidence            32110         011234567888999999999999999999999999985 899999999999874    3368998


Q ss_pred             HhH-HHHhHHHHhhhccCCCCCCccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Q 012990          175 DLF-MKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVY  253 (452)
Q Consensus       175 ~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (452)
                      ..+ ..+++++|+.+ ||.+.+.       ...+.+....+..     ...         +.....+..++.+.+.+++.
T Consensus       168 ~~~~~~~~~~vi~~l-~G~~~~~-------~~~~~~~~~~~~~-----~~~---------p~~~~~~~~~~~~~~~~~~~  225 (433)
T 3ivy_A          168 EQVSCELPLQAIAGL-LGVPQED-------RGKLFHWSNEMTG-----NED---------PEYAHIDPKASSAELIGYAM  225 (433)
T ss_dssp             HHTTSHHHHHHHHHH-HTCCHHH-------HHHHHHHHTTCSC-----CCC---------GGGTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH-cCCCHHH-------HHHHHHHHHHHhc-----cCC---------chhhhHHHHHHHHHHHHHHH
Confidence            888 99999999996 8864321       1222222221110     000         00001134566777888888


Q ss_pred             HHHHHHHhhhh-hhHhhhh----------HHHHHHHHHHHhCCCcchhhhhhccCCCHHHHhhcH----H-----HHHHH
Q 012990          254 KIIRKKTDQMH-DFQEEYT----------SEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMH----Y-----LHAAI  313 (452)
Q Consensus       254 ~~i~~~~~~~~-~l~~~~l----------~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~lp----~-----l~a~i  313 (452)
                      +++++++++.. ++++.++          .+++..++...+.++...+......  ..-.+.+-|    .     .+++|
T Consensus       226 ~~i~~r~~~~~~dll~~ll~~~~~~~~ls~~ei~~~~~~ll~AG~dTTa~~l~~--~l~~L~~~P~~~~~l~~E~~~a~i  303 (433)
T 3ivy_A          226 KMAEEKAKNPADDIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQ--GMMAFAEHPDQWELYKKVRPETAA  303 (433)
T ss_dssp             HHHHHC-------CHHHHHSCC--CCCCCHHHHHHHHHHHHHHSSHHHHHHHHH--HHHHHHHCHHHHHHHHHHCCTTHH
T ss_pred             HHHHHHhcCCCCcHHHHHHhhhcCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHH--HHHHHHHCHHHHHHHHhCcccchh
Confidence            88888765432 2333222          4455555555544443222111100  000000001    0     06899


Q ss_pred             HHhhcCCCCCCCCccccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCcccccc
Q 012990          314 TETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQ  393 (452)
Q Consensus       314 ~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg  393 (452)
                      +|+||++|+++.+.|.+.+|+++ +||.|||||.|+++.+++||||++| +||++|+|+||.           ..++|||
T Consensus       304 ~E~LRl~p~~~~~~R~~~~d~~l-~G~~Ip~G~~V~~~~~~~~rdp~~f-~dp~~F~p~R~~-----------~~~l~FG  370 (433)
T 3ivy_A          304 DEIVRWATPVTAFQRTALRDYEL-SGVQIKKGQRVVMFYRSANFDEEVF-QDPFTFNILRNP-----------NPHVGFG  370 (433)
T ss_dssp             HHHHHHHCSBCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTCCS-----------CCCCTTC
T ss_pred             HHHhhhCcchhceeeEECCCEEE-CCEEECCCCEEEEChhhhcCCchhC-CCcCccCCCCCC-----------CCCCCCC
Confidence            99999999999888998888887 9999999999999999999999999 999999999993           3589999


Q ss_pred             -CCCCCCcchHHHHHHHHHHHHHhhccee-EEEecCCccccccceeeEecCCceeEEEeeC
Q 012990          394 -AGPRICLGKEFAYRQMKIYSAVLLSCFK-FRLRNVSETVNYRTMINLHIDGGLHVRVFHR  452 (452)
Q Consensus       394 -~G~r~C~G~~lA~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  452 (452)
                       .|+|.|+|++||++|++++++.|+++|+ +++..+.   .............++|++++|
T Consensus       371 g~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~---~~~~~~~~~g~~~lpv~~~~R  428 (433)
T 3ivy_A          371 GTGAHYCIGANLARMTINLIFNAVADHMPDLKPISAP---ERLRSGWLNGIKHWQVDYTGR  428 (433)
T ss_dssp             SSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCC---EECCCSSBCCEEECEEESCC-
T ss_pred             CCCCccCCCHHHHHHHHHHHHHHHHHhCCccEECCCC---ceeccCcccCcceeEEEEecc
Confidence             9999999999999999999999999999 9997532   222233344445789998876


No 60 
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00  E-value=5.7e-48  Score=359.41  Aligned_cols=350  Identities=15%  Similarity=0.141  Sum_probs=250.4

Q ss_pred             hHHHHHHHHHHhhC-CeEEec-CCceeEEecChhhHHHHHhcccccCCCCcchHHH-----HHHh-----cCCe-eEecC
Q 012990           56 RLHHYMTDLAAKHG-TYRLLG-PFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSI-----LKDL-----LGDG-IFTVD  122 (452)
Q Consensus        56 ~~~~~~~~~~~~yG-~~~~~~-~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~-----~~~~-----~g~~-i~~~~  122 (452)
                      +++.++.+++ +|| ++++.. ++.++|+++||+++++|+.++  .|++++....+     ....     .+.+ +++.+
T Consensus        23 ~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   99 (413)
T 2z36_A           23 APPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFPLFTLDAATLQQLRSQPPLMLGMD   99 (413)
T ss_dssp             BCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCCCSSCCHHHHHHHTTSCCCGGGCC
T ss_pred             CchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCccccccccccccccccccccccccC
Confidence            4678888887 678 577776 788999999999999999864  46554321100     1122     2677 78889


Q ss_pred             chhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHH-HHhHHHHhhhccCCCCCCccCCC
Q 012990          123 GEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFM-KSTLDSIFKVAFGVELDSVCGSN  201 (452)
Q Consensus       123 g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~-~~~~~~i~~~~fG~~~~~~~~~~  201 (452)
                      |+.|+++|++++++|++..++.+.+ .+++.++++++.+.+  ..+.++|+.+.+. .++.++++.+ ||.+.+..    
T Consensus       100 g~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~ll~~l~~--~~~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~----  171 (413)
T 2z36_A          100 GAEHSAARRPVIGEFTVKRLAALRP-RIQDIVDHFIDDMLA--TDQRPVDLVQALSLPVPSLVICEL-LGVPYTDH----  171 (413)
T ss_dssp             HHHHHHHHHHHHGGGSHHHHHHHHH-HHHHHHHHHHHHHTT--CSCSSEEHHHHTTTHHHHHHHHHH-HTCCGGGH----
T ss_pred             chHHHHHHHHHHHhhCHHHHHHHHH-HHHHHHHHHHHHHHH--hcCCCccHHHHHhhhhHHHHHHHH-hCCCHHHH----
Confidence            9999999999999999999999985 899999999999864  2256899987665 6899999995 89865421    


Q ss_pred             chhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhHhhhh---------
Q 012990          202 EEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM-HDFQEEYT---------  271 (452)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~l~~~~l---------  271 (452)
                         ..+......+.                  .....++..++.+.+.+++.++++++++.. +++++.++         
T Consensus       172 ---~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~l  230 (413)
T 2z36_A          172 ---DFFQSRTTMMV------------------SRTSMEDRRRAFAELRAYIDDLITRKESEPGDDLFSRQIARQRQEGTL  230 (413)
T ss_dssp             ---HHHHHHHHHTT------------------CSSCHHHHHHHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHSCC
T ss_pred             ---HHHHHHHHHHh------------------cccCcHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhcCCCCC
Confidence               22222111110                  000013455666777778888877766432 12332222         


Q ss_pred             -HHHHHHHHHHHhCCCcchhhhhhcc-------CC--CHHHHhhcHHHHHHHHHhhcCCCCCC-CCccccccCCccCCCe
Q 012990          272 -SEKIVQEVKEATGAKDISDFLKVAG-------CI--SEEALEKMHYLHAAITETLRLYPAVP-VDAKMCFSDDTLPDGF  340 (452)
Q Consensus       272 -~~~l~~Ei~~~~~~~~~~~~~~~~~-------~~--~~~~~~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~~~~~~~g~  340 (452)
                       .+++..++...+.++..++......       .+  ...-.++..|++|||+|+||++|+++ ...|.+.+|+++ +||
T Consensus       231 s~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~G~  309 (413)
T 2z36_A          231 DHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKANPGRTPMAVEELLRYFTIADGVTSRLATEDVEI-GGV  309 (413)
T ss_dssp             CHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGGGHHHHHHHHHHHHCTTTTCEEEEECSCEEE-TTE
T ss_pred             CHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhCHHHHHHHHhChHHHHHHHHHHHHhCCCcccceeeeeCCCEEE-CCE
Confidence             3344444444443333222111100       00  11112234689999999999999999 678888888777 999


Q ss_pred             eecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcce
Q 012990          341 SVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF  420 (452)
Q Consensus       341 ~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f  420 (452)
                      .|||||.|.++.+++|+||++| +||++|+||||.           ..++|||.|+|.|+|++||++|++++++.|+++|
T Consensus       310 ~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f  377 (413)
T 2z36_A          310 SIKAGEGVIVSMLSANWDPAVF-KDPAVLDVERGA-----------RHHLAFGFGPHQCLGQNLARMELQIVFDTLFRRI  377 (413)
T ss_dssp             EECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCCC-----------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHS
T ss_pred             EECCCCEEEEChHhhcCChhhC-CCccccCCCCCC-----------CCCCCCCCCCccCccHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999999 999999999983           2489999999999999999999999999999999


Q ss_pred             -eEEEecCCccccccceeeEecCCceeEEEe
Q 012990          421 -KFRLRNVSETVNYRTMINLHIDGGLHVRVF  450 (452)
Q Consensus       421 -~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  450 (452)
                       ++++.++..++.+......+....++|++.
T Consensus       378 ~~~~l~~~~~~~~~~~~~~~~g~~~lpv~~~  408 (413)
T 2z36_A          378 PSLRLAVPMEDVPFKGDSVIYGVHELPVTWH  408 (413)
T ss_dssp             TTCEESSCGGGSCBCTTSSSCCBSCCEEECC
T ss_pred             CCccccCCcccceecccccccCcceeeEEee
Confidence             589876534555555556666678888764


No 61 
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00  E-value=3.1e-47  Score=356.63  Aligned_cols=355  Identities=16%  Similarity=0.109  Sum_probs=255.4

Q ss_pred             hhHHHHHHHHHHhhC-CeEEecC-------CceeEEecChhhHHHHHhcccccCCCCcch--HHHHHH--hcCCeeEecC
Q 012990           55 NRLHHYMTDLAAKHG-TYRLLGP-------FRSEVYSSDPANVEYMLKTNFDNYGKGSYN--YSILKD--LLGDGIFTVD  122 (452)
Q Consensus        55 ~~~~~~~~~~~~~yG-~~~~~~~-------~~~~vvv~~pe~~~~il~~~~~~~~~~~~~--~~~~~~--~~g~~i~~~~  122 (452)
                      .+++.++.+++ +|| ++++..+       +.++|+|+||+.+++|+.++ +.|++++..  ...+..  ..+.++++.+
T Consensus        44 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~l~~~d  121 (435)
T 2wm5_A           44 DVRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGSMIVLD  121 (435)
T ss_dssp             HHHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHGGGGCC
T ss_pred             CChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhccccccCC
Confidence            45788899996 588 4666664       56899999999999999875 567766421  101111  1256778889


Q ss_pred             chhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhH-HHHhHHHHhhhccCCCCCCccCCC
Q 012990          123 GEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLF-MKSTLDSIFKVAFGVELDSVCGSN  201 (452)
Q Consensus       123 g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~  201 (452)
                      |+.|+++|++++++|+...++.+.+ .+++.++++++.+.+. +++.++|+.+.+ ..+++++++.+ ||.+.+..    
T Consensus       122 g~~h~~~R~~l~~~fs~~~l~~~~~-~i~~~~~~ll~~l~~~-~~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~~----  194 (435)
T 2wm5_A          122 DPRHQRLRSIVSRAFTPKVVARIEA-AVRDRAHRLVSSMIAN-NPDRQADLVSELAGPLPLQIICDM-MGIPKADH----  194 (435)
T ss_dssp             TTHHHHHHHHHHHTCCHHHHHHHHH-HHHHHHHHHHHHHHHH-CTTSEEEHHHHTTTHHHHHHHHHH-HTCCGGGH----
T ss_pred             cHHHHHHHHHhHHhhCHHHHHHHHH-HHHHHHHHHHHHHHhc-CCCCcEehHHHHHHHHHHHHHHHH-cCCCHHHH----
Confidence            9999999999999999999999985 8999999999999764 235589999766 78999999999 99876421    


Q ss_pred             chhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhHhhhh---------
Q 012990          202 EEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM-HDFQEEYT---------  271 (452)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~l~~~~l---------  271 (452)
                         ..+.+....+...     ..|.     +.  ...++..++.+.+.+++.+++++++++. .++++.++         
T Consensus       195 ---~~~~~~~~~~~~~-----~~p~-----~~--~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~l  259 (435)
T 2wm5_A          195 ---QRIFHWTNVILGF-----GDPD-----LA--TDFDEFMQVSADIGAYATALAEDRRVNHHDDLTSSLVEAEVDGERL  259 (435)
T ss_dssp             ---HHHHHHHHHHHHT-----TCTT-----SC--CCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBTTBCC
T ss_pred             ---HHHHHHHHHHhcc-----CCcc-----hh--hhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHhhhccCCCC
Confidence               3343333322211     1110     01  2234566777888899999998876543 22332221         


Q ss_pred             -HHHHHHHHHHHhCCCcchhhhhhccC-------C--CHHHHhhc-HHHHHHHHHhhcCCCCCCCCccccccCCccCCCe
Q 012990          272 -SEKIVQEVKEATGAKDISDFLKVAGC-------I--SEEALEKM-HYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGF  340 (452)
Q Consensus       272 -~~~l~~Ei~~~~~~~~~~~~~~~~~~-------~--~~~~~~~l-p~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~  340 (452)
                       .+++..++...+.++...+.......       +  ...-.++. +|++|+|+|+||++|+++...|.+.+|+++ +||
T Consensus       260 s~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~G~  338 (435)
T 2wm5_A          260 SSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFDGLAPTAVEEIVRWASPVVYMRRTLTQDIEL-RGT  338 (435)
T ss_dssp             CHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHHHHHHHHHHHHHHHHCSBCCEEEEESSCEEE-TTE
T ss_pred             CHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChHhHHHHHHHHHHhhcCcccCcceEeCCCeeE-CCE
Confidence             44555555554444432221111000       0  00111122 399999999999999999888888888777 999


Q ss_pred             eecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccC-CCCCCcchHHHHHHHHHHHHHhhcc
Q 012990          341 SVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQA-GPRICLGKEFAYRQMKIYSAVLLSC  419 (452)
Q Consensus       341 ~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~-G~r~C~G~~lA~~e~~~~l~~ll~~  419 (452)
                      .|||||.|.++.+++|+||++| +||++|+||||           +..++|||. |+|.|+|++||++|++++++.||++
T Consensus       339 ~Ip~Gt~V~~~~~~~~rdp~~f-~dP~~F~PeR~-----------~~~~lpFG~~G~r~C~G~~lA~~e~~~~la~ll~~  406 (435)
T 2wm5_A          339 KMAAGDKVSLWYCSANRDESKF-ADPWTFDLARN-----------PNPHLGFGGGGAHFCLGANLARREIRVAFDELRRQ  406 (435)
T ss_dssp             EECTTCEEEECHHHHTTCTTTS-SSTTCCCTTCC-----------SCCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHH
T ss_pred             EECCCCEEEeCHHHhcCCcccC-cCCCccCCCCC-----------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999 99999999994           135899999 9999999999999999999999999


Q ss_pred             ee-EEEecCCccccccceeeEecCCceeEEE
Q 012990          420 FK-FRLRNVSETVNYRTMINLHIDGGLHVRV  449 (452)
Q Consensus       420 f~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~  449 (452)
                      |+ +++.++   ..+....+.+....++|++
T Consensus       407 f~~~~l~~~---~~~~~~~~~~~~~~lpv~~  434 (435)
T 2wm5_A          407 MPDVVATEE---PARLLSQFIHGIKTLPVTW  434 (435)
T ss_dssp             CTTCEECSC---CEECCCSSBCCEEECEEEC
T ss_pred             CCccEECCC---ccccccccccCccceeEEe
Confidence            97 999752   2334444555666777776


No 62 
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00  E-value=3.3e-47  Score=353.20  Aligned_cols=344  Identities=15%  Similarity=0.124  Sum_probs=244.7

Q ss_pred             HHHHHhhC-CeEEecC-Cc---eeEEecChhhHHHHHhcccccCCCCcc------hH--HHHH-HhcCCeeEecCchhHH
Q 012990           62 TDLAAKHG-TYRLLGP-FR---SEVYSSDPANVEYMLKTNFDNYGKGSY------NY--SILK-DLLGDGIFTVDGEKWR  127 (452)
Q Consensus        62 ~~~~~~yG-~~~~~~~-~~---~~vvv~~pe~~~~il~~~~~~~~~~~~------~~--~~~~-~~~g~~i~~~~g~~w~  127 (452)
                      .+++++ | ++++.++ +.   ++|+|+||+++++|+.++ ..|++++.      ..  .... ...+.++++.+|+.|+
T Consensus        20 ~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~   97 (398)
T 1lfk_A           20 DELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDH-QQFSTRRRWDPRDEIGGKGIFRPRELVGNLMDYDPPEHT   97 (398)
T ss_dssp             HHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCT-TTEEECTTCCC-------------CCTTCGGGCCTTHHH
T ss_pred             HHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhC-cccccccccccccccCCcccccccccccCccccCCHHHH
Confidence            347666 7 5666654 45   799999999999999333 34655543      11  1111 2235678888999999


Q ss_pred             HhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHHH-HhHHHHhhhccCCCCCCccCCCchhch
Q 012990          128 EQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMK-STLDSIFKVAFGVELDSVCGSNEEGTR  206 (452)
Q Consensus       128 ~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~-~~~~~i~~~~fG~~~~~~~~~~~~~~~  206 (452)
                      ++|++++++|+..+++.+.+ .+++.++++++.+.+   .|+++|+.+.+.. ++.++++. +||.+.+..       ..
T Consensus        98 ~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~-------~~  165 (398)
T 1lfk_A           98 RLRRKLTPGFTLRKMQRMAP-YIEQIVNDRLDEMER---AGSPADLIAFVADKVPGAVLCE-LVGVPRDDR-------DM  165 (398)
T ss_dssp             HHHHHHGGGGCHHHHHHHHH-HHHHHHHHHHHHHHH---HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGGH-------HH
T ss_pred             HHHHHHHhhhCHHHHHHHHH-HHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHH-HcCCCHHHH-------HH
Confidence            99999999999999999985 899999999999974   3567999999987 88899887 589875421       22


Q ss_pred             HHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhHhhhh--------HHHHHH
Q 012990          207 FSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM-HDFQEEYT--------SEKIVQ  277 (452)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~l~~~~l--------~~~l~~  277 (452)
                      +.+....+..                . ....++..++.+.+.+++.+.++++++.. +++++.++        .+++..
T Consensus       166 ~~~~~~~~~~----------------~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~l~~~el~~  228 (398)
T 1lfk_A          166 FMKLCHGHLD----------------A-SLSQKRRAALGDKFSRYLLAMIARERKEPGEGMIGAVVAEYGDDATDEELRG  228 (398)
T ss_dssp             HHHHHHHTTC----------------T-TSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHGGGSCHHHHHH
T ss_pred             HHHHHHHHHh----------------c-ccchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhcCCCCCHHHHHH
Confidence            3222221110                0 11234566777788888888888876543 22333222        455666


Q ss_pred             HHHHHhCCCcchhhhhhcc-------C--CCHHHHhhcHHHHHHHHHhhcCCCCCC-CCccccccCCccCCCeeecCCCE
Q 012990          278 EVKEATGAKDISDFLKVAG-------C--ISEEALEKMHYLHAAITETLRLYPAVP-VDAKMCFSDDTLPDGFSVRKGDM  347 (452)
Q Consensus       278 Ei~~~~~~~~~~~~~~~~~-------~--~~~~~~~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~~~~~~~g~~ip~Gt~  347 (452)
                      ++...+.++..++......       .  ....-.++..|++|||+|+||++|+++ ...|.+.+|+++ +||.|||||.
T Consensus       229 ~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l-~G~~Ip~Gt~  307 (398)
T 1lfk_A          229 FCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQSAQRAVDELIRYLTVPYSPTPRIAREDLTL-AGQEIKKGDS  307 (398)
T ss_dssp             HHHHHHHHTSHHHHHHHHHHHHHHHHSGGGGGGGSSCHHHHHHHHHHHHHHHCCBSCCSCEEESSCEEE-TTEEECTTCE
T ss_pred             HHHHHHHHhccHHHHHHHHHHHHHHHCHHHHHHHHhCHHHHHHHHHHHHHhCcccccccceecCCCeeE-CCEEECCCCE
Confidence            6666655544332211110       0  011112235699999999999999999 578888888777 9999999999


Q ss_pred             EEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcce-eEEEec
Q 012990          348 VCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF-KFRLRN  426 (452)
Q Consensus       348 v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~  426 (452)
                      |.++.+++|+||++| +||++|+||||.           ..++|||.|+|.|+|++||++|++++++.|+++| ++++..
T Consensus       308 V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~  375 (398)
T 1lfk_A          308 VICSLPAANRDPALA-PDVDRLDVTREP-----------IPHVAFGHGVHHCLGAALARLELRTVFTELWRRFPALRLAD  375 (398)
T ss_dssp             EEECHHHHTTCTTTC-TTTTSCCTTSCC-----------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESS
T ss_pred             EEeChHHhCCCchhc-CCccccCCCCCC-----------CCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCCCCEeCC
Confidence            999999999999999 999999999983           2489999999999999999999999999999999 799975


Q ss_pred             CCccccccceeeEecCCceeEEE
Q 012990          427 VSETVNYRTMINLHIDGGLHVRV  449 (452)
Q Consensus       427 ~~~~~~~~~~~~~~~~~~~~v~~  449 (452)
                      +..++.+..+...+....++|++
T Consensus       376 ~~~~~~~~~~~~~~~~~~lpv~~  398 (398)
T 1lfk_A          376 PAQDTEFRLTTPAYGLTELMVAW  398 (398)
T ss_dssp             TTCCCEEECSSSBCEEEECEEEC
T ss_pred             CCCccccccCcCcCCcccceeeC
Confidence            44455555555555555677653


No 63 
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00  E-value=3.2e-48  Score=360.80  Aligned_cols=353  Identities=14%  Similarity=0.104  Sum_probs=253.3

Q ss_pred             hhHHHHHHHHHHhhC-CeEEecCC--ceeEEecChhhHHHHHhcccccCCCCcchHHH-H-HHh--c-CCeeEecCchhH
Q 012990           55 NRLHHYMTDLAAKHG-TYRLLGPF--RSEVYSSDPANVEYMLKTNFDNYGKGSYNYSI-L-KDL--L-GDGIFTVDGEKW  126 (452)
Q Consensus        55 ~~~~~~~~~~~~~yG-~~~~~~~~--~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~-~-~~~--~-g~~i~~~~g~~w  126 (452)
                      .+++.++.++++ || ++.+...|  .+.++|++++.+++|+++. +.|++++..... . ...  . +.++++.+|+.|
T Consensus        37 ~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h  114 (415)
T 3mgx_A           37 LERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAPS-APLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQH  114 (415)
T ss_dssp             TTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCTT-SSEECTTCSSTTCCSSSCCTTTTTSGGGCCHHHH
T ss_pred             CChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhCh-hhhcCCccccccccccccccccCCCccccCcHHH
Confidence            358889999987 77 56554344  7899999999999999654 567665432100 0 000  1 456788899999


Q ss_pred             HHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhH-HHHhHHHHhhhccCCCCCCccCCCchhc
Q 012990          127 REQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLF-MKSTLDSIFKVAFGVELDSVCGSNEEGT  205 (452)
Q Consensus       127 ~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~  205 (452)
                      +++|++++++|+...++.+.+ .+++.++++++.+.+    +..+|+...+ ..+++++|+. +||.+.+.       ..
T Consensus       115 ~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~ll~~l~~----~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~-------~~  181 (415)
T 3mgx_A          115 RKLRKLVGPLLSRAAARKLAE-RVRIEVGDVLGRVLD----GEVCDAATAIGPRIPAAVVCE-ILGVPAED-------ED  181 (415)
T ss_dssp             HHHHHHHGGGSSHHHHHHSHH-HHHHHHHHHTTTSSS----SSCEESTTTTTTHHHHHHHHH-HHTCCGGG-------HH
T ss_pred             HHHHHHhHhhhCHHHHHHHHH-HHHHHHHHHHHHHHh----cCCcchHHHHHHHHHHHHHHH-HcCCCHHH-------HH
Confidence            999999999999999999985 889999999887753    2379999888 5699999998 57865331       13


Q ss_pred             hHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhHhhhh------HHHHHHH
Q 012990          206 RFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM-HDFQEEYT------SEKIVQE  278 (452)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~l~~~~l------~~~l~~E  278 (452)
                      .+.+....+...     ..+     .+.+.    ...++.+.+.+++.+++++++.+. +++++.++      .+++..+
T Consensus       182 ~~~~~~~~~~~~-----~~~-----~~~~~----~~~~~~~~l~~~~~~~i~~rr~~~~~dll~~ll~~~~ls~~el~~~  247 (415)
T 3mgx_A          182 MLIDLTNHAFGG-----EDE-----LFDGM----TPRQAHTEILVYFDELITARRKEPGDDLVSTLVTDDDLTIDDVLLN  247 (415)
T ss_dssp             HHHHHHHHHTSC-----CC---------CC----CHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCTTSCHHHHHHH
T ss_pred             HHHHHHHHHHcc-----cCc-----ccchH----HHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhCCCCCHHHHHHH
Confidence            333333332211     000     00111    112567778888888888877643 22433332      4556666


Q ss_pred             HHHHhCCCcchhhhhhc-------cCC--CHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccCCCeeecCCCEEE
Q 012990          279 VKEATGAKDISDFLKVA-------GCI--SEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC  349 (452)
Q Consensus       279 i~~~~~~~~~~~~~~~~-------~~~--~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~Gt~v~  349 (452)
                      +...+.++..++.....       ..+  ...-.++.||++++|+|+||++|+++...|.+.+|+++ +||.|||||.|+
T Consensus       248 ~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~LRl~pp~~~~~R~~~~d~~l-~G~~Ip~G~~V~  326 (415)
T 3mgx_A          248 CDNVLIGGNETTRHAITGAVHALATVPGLLTALRDGSADVDTVVEEVLRWTSPAMHVLRVTTADVTI-NGRDLPSGTPVV  326 (415)
T ss_dssp             HHHHHHHHHTTHHHHHHHHHHHHHHSTTHHHHHHHTSSCHHHHHHHHHHHHCCBCEEEEEESSCEEE-TTEEECTTCEEE
T ss_pred             HHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhChHhHHHHHHHHHHhcCcccccceecCCCeeE-CCEEECCCCEEE
Confidence            55555443322211110       001  11223356899999999999999999888999999887 999999999999


Q ss_pred             EehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcce-eEEEecCC
Q 012990          350 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF-KFRLRNVS  428 (452)
Q Consensus       350 ~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~  428 (452)
                      ++.+++||||++| +||++|||+||.           ..++|||.|+|.|+|++||++|++++++.|+++| ++++..+ 
T Consensus       327 ~~~~a~~rDp~~~-~dP~~F~P~R~~-----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~-  393 (415)
T 3mgx_A          327 AWLPAANRDPAEF-DDPDTFLPGRKP-----------NRHITFGHGMHHCLGSALARIELSVVLRVLAERVSRVDLERE-  393 (415)
T ss_dssp             EEHHHHTTCTTTS-SSTTSCCTTCCS-----------CCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEEECSC-
T ss_pred             echHHhCCChhhc-CCccccCCCCCC-----------CCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCCccCCC-
Confidence            9999999999999 999999999973           3589999999999999999999999999999999 8998743 


Q ss_pred             ccccccceeeEecCCceeEEEeeC
Q 012990          429 ETVNYRTMINLHIDGGLHVRVFHR  452 (452)
Q Consensus       429 ~~~~~~~~~~~~~~~~~~v~~~~r  452 (452)
                        ..+..+...+....++|++++|
T Consensus       394 --~~~~~~~~~~~~~~lpv~~~~R  415 (415)
T 3mgx_A          394 --PAWLRAIVVQGYRELPVRFTGR  415 (415)
T ss_dssp             --CEECSCSSBCCEEECEEEEEEC
T ss_pred             --cccccCCcccCceeeeEEEecC
Confidence              2233444455566899999988


No 64 
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00  E-value=8.7e-48  Score=359.79  Aligned_cols=355  Identities=12%  Similarity=0.117  Sum_probs=253.7

Q ss_pred             hhHHHHHHHHHHhhC--CeEEecCCceeEEecChhhHHHHHhcccccCCCCcch-HHHHHHhcCCeeEecCchhHHHhHh
Q 012990           55 NRLHHYMTDLAAKHG--TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYN-YSILKDLLGDGIFTVDGEKWREQRK  131 (452)
Q Consensus        55 ~~~~~~~~~~~~~yG--~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~-~~~~~~~~g~~i~~~~g~~w~~~R~  131 (452)
                      .+++.++.++++++|  ++.+..++ +.++|+||+.+++|+.+. +.|++++.. ........+.++++.+|+.|+++|+
T Consensus        38 ~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~dg~~h~~~R~  115 (421)
T 3lxh_A           38 QGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYRSP-ERFSSRVIWVPREAGEAYDMVPTKLDPPEHTPYRK  115 (421)
T ss_dssp             GCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHTCT-TTEETTCCSSSHHHHHHCCCTTTTCCTTTHHHHHH
T ss_pred             cChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHcCh-hhccCCcccCCcccccccccCCccCCcHHHHHHHH
Confidence            458999999988874  45555544 589999999999999654 677765422 1122233456678889999999999


Q ss_pred             hhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhH-HHHhHHHHhhhccCCCCCCccCCCchhchHHHh
Q 012990          132 ISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLF-MKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSA  210 (452)
Q Consensus       132 ~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~  210 (452)
                      +++++|+.+.++.+.+ .+++.++++++.+..    +..+|+...+ ..++.++++. +||.+.+.       ...+.+.
T Consensus       116 ~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~-------~~~~~~~  182 (421)
T 3lxh_A          116 AIDKGLNLAEIRKLED-QIRTIAVEIIEGFAD----RGHCEFGSEFSTVFPVRVFLA-LAGLPVED-------ATKLGLL  182 (421)
T ss_dssp             HHHHHHSHHHHHTTHH-HHHHHHHHHHHTTTT----TSEEEHHHHTTTTHHHHHHHH-HHTCCGGG-------HHHHHHH
T ss_pred             HHhhhcCHHHHHHHHH-HHHHHHHHHHHHHhh----cCCeehHHHHHHHHHHHHHHH-HcCCCHHH-------HHHHHHH
Confidence            9999999999999985 889999999988753    3468876666 5577777765 58876432       1333333


Q ss_pred             HhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhHhhhh----------HHHHHHHH
Q 012990          211 FDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMH-DFQEEYT----------SEKIVQEV  279 (452)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~l~~~~l----------~~~l~~Ei  279 (452)
                      ...+....            .+++....++..++.+.+.+++.+.++++++... ++++.++          .+++..++
T Consensus       183 ~~~~~~~~------------~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~l~~~ei~~~~  250 (421)
T 3lxh_A          183 ANEMTRPS------------GNTPEEQGRSLEAANKGFFEYVAPIIAARRGGSGTDLITRILNVEIDGKPMPDDRALGLV  250 (421)
T ss_dssp             HHHHHSCC------------CSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHTSCBTTBCCCHHHHHHHH
T ss_pred             HHHHhccc------------cCCCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhhhccCCCCCHHHHHHHH
Confidence            33222110            0011122456677888889999999988776432 2333222          45555555


Q ss_pred             HHHhCCCcchhhhhhccC---------CCHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccCCCeeecCCCEEEE
Q 012990          280 KEATGAKDISDFLKVAGC---------ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCY  350 (452)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~Gt~v~~  350 (452)
                      ...+.++...+.......         ....-.++..|++++|+|+||++|++ ...|.+.+|+++ +||.|||||.|++
T Consensus       251 ~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~-~~~R~~~~d~~l-~G~~Ip~G~~V~~  328 (421)
T 3lxh_A          251 SLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPLKLQRGVEELFRRFAVV-SDARYVVSDMEF-HGTMLKEGDLILL  328 (421)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHHHHHHHHHHHCCCB-EEEEEECSCEEE-TTEEECTTCEEEE
T ss_pred             HHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHHHHHHHHHHHHHhcCcc-CCceeeCCCeeE-CCEEECCCCEEEE
Confidence            554443322221111000         01122234568999999999999999 888999998887 9999999999999


Q ss_pred             ehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcce-eEEEecCCc
Q 012990          351 QAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF-KFRLRNVSE  429 (452)
Q Consensus       351 ~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~  429 (452)
                      +.+++||||++| +||++|+||||           ...++|||.|+|.|+|++||++|++++++.|+++| +|++.++. 
T Consensus       329 ~~~~~~rdp~~~-~dP~~F~PeR~-----------~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~~-  395 (421)
T 3lxh_A          329 PTALHGLDDRHH-DDPMTVDLSRR-----------DVTHSTFAQGPHRCAGMHLARLEVTVMLQEWLARIPEFRLKDRA-  395 (421)
T ss_dssp             ETHHHHTCTTTS-SSTTSCCTTCS-----------CCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCCCCEECTTC-
T ss_pred             chhhhCCChhhC-CCcCeeCCCCC-----------CCCCCCCCCcCccCcCHHHHHHHHHHHHHHHHHhCCCcEECCCC-
Confidence            999999999999 99999999995           35699999999999999999999999999999999 99998643 


Q ss_pred             cccccceeeEecCCceeEEEeeC
Q 012990          430 TVNYRTMINLHIDGGLHVRVFHR  452 (452)
Q Consensus       430 ~~~~~~~~~~~~~~~~~v~~~~r  452 (452)
                      +..+..+.+..+ ..++|+++||
T Consensus       396 ~~~~~~~~~~~~-~~lpv~~~p~  417 (421)
T 3lxh_A          396 VPIYHSGIVAAV-ENIPLEWEPQ  417 (421)
T ss_dssp             CCEEECSSBCEE-ECCEEECCCC
T ss_pred             CceeccccccCc-eeeeEEEecc
Confidence            344444444444 4699999875


No 65 
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00  E-value=1.1e-46  Score=352.51  Aligned_cols=357  Identities=17%  Similarity=0.179  Sum_probs=255.8

Q ss_pred             hhhHHHHHHHHHHhhCC-eEEecCCceeEEecChhhHHHHHhcccccCCCCcchHHHHH----------HhcCCeeEecC
Q 012990           54 FNRLHHYMTDLAAKHGT-YRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILK----------DLLGDGIFTVD  122 (452)
Q Consensus        54 ~~~~~~~~~~~~~~yG~-~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~----------~~~g~~i~~~~  122 (452)
                      ..+++.++.++ ++||+ ++...+   .++|++++.+++|++++ ..+++++... ...          ...+.++++.+
T Consensus        28 ~~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~d  101 (418)
T 3r9b_A           28 RADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRHP-SSCSDRTKST-IFQRQLAAETQPRPQGPASFLFLD  101 (418)
T ss_dssp             TTCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHCT-TEECCGGGCH-HHHHHHC---------CCCGGGCC
T ss_pred             ccCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcCc-ccccCccccc-ccccccccccccccccccchhhcC
Confidence            34578888888 56785 554443   89999999999999765 3444443222 111          12356788899


Q ss_pred             chhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhH-HHHhHHHHhhhccCCCCCCccCCC
Q 012990          123 GEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLF-MKSTLDSIFKVAFGVELDSVCGSN  201 (452)
Q Consensus       123 g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~  201 (452)
                      |+.|+++|++++++|+++.++.+.+ .+++.++++++ +.    .+..+|+...+ ..+++++++. +||.+.+..    
T Consensus       102 g~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~ll~-l~----~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~----  170 (418)
T 3r9b_A          102 PPDHTRLRGLVSKAFAPRVIKRLEP-EITALVDQLLD-AV----DGPEFNLIDNLAYPLPVAVICR-LLGVPIEDE----  170 (418)
T ss_dssp             TTHHHHHHHHHHGGGSHHHHGGGHH-HHHHHHHHHHH-TC----CSSEEEHHHHTTTHHHHHHHHH-HHTCCGGGH----
T ss_pred             CchHHHHHHHhhhhhCHHHHHHHHH-HHHHHHHHHHh-hh----ccCCeehHHHHhCcCCHHHHHH-HcCCCHHHH----
Confidence            9999999999999999999999985 88999999998 64    23478976555 5899999999 899876421    


Q ss_pred             chhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhHhhhh---------
Q 012990          202 EEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMH-DFQEEYT---------  271 (452)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~l~~~~l---------  271 (452)
                         ..+.+....+...     +.+... ...++....++..++.+.+.+++.+.+++++++.. ++++.++         
T Consensus       171 ---~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~l  241 (418)
T 3r9b_A          171 ---PKFSRASALLAAA-----LDPFLA-LTGETSDLFDEQMKAGMWLRDYLRALIDERRRTPGEDLMSGLVAVEESGDQL  241 (418)
T ss_dssp             ---HHHHHHHHHHHHT-----TSCHHH-HHSSCCTTHHHHHHHHHHHHHHHHHHHHHTTTSCCSSHHHHHHHHHHHSSSC
T ss_pred             ---HHHHHHHHHHHhh-----cCcccc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHhhhccCCC
Confidence               2333333322111     111111 11223345567788888999999999998775432 2333322         


Q ss_pred             -HHHHHHHHHHHhCCCcchhhhhhcc-------CC--CHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccCCCee
Q 012990          272 -SEKIVQEVKEATGAKDISDFLKVAG-------CI--SEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFS  341 (452)
Q Consensus       272 -~~~l~~Ei~~~~~~~~~~~~~~~~~-------~~--~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~  341 (452)
                       .+++..++...+.++..++......       .+  ...-.++..|++|+|+|+||++|+++...|.+.+|+++ +||.
T Consensus       242 s~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~  320 (418)
T 3r9b_A          242 TEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGSRASAVIEETMRYDPPVQLVSRYAGDDLTI-GTHT  320 (418)
T ss_dssp             CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCGGGHHHHHHHHHHHSCSBCCEEEEESSCEEE-TTEE
T ss_pred             CHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhChHhHHHHHHHHHHhCCccccceeEeCCCeEE-CCEE
Confidence             4455555555544433222111100       01  11223345689999999999999999988999888887 9999


Q ss_pred             ecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcce-
Q 012990          342 VRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF-  420 (452)
Q Consensus       342 ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f-  420 (452)
                      |||||.|.++.+++|+||++| +||++|+|+|+           ...++|||.|+|.|+|++||++|++++++.|+++| 
T Consensus       321 Ip~G~~V~~~~~~~~rdp~~~-~dp~~F~p~R~-----------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~  388 (418)
T 3r9b_A          321 VPKGDTMLLLLAAAHRDPTIV-GAPDRFDPDRA-----------QIRHLGFGKGAHFCLGAPLARLEATVALPALAARFP  388 (418)
T ss_dssp             ECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCS-----------CCCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCT
T ss_pred             ECCCCEEEEChHHhcCCcccC-CCcCcCCCCCC-----------CCCCcCCCCcCccCccHHHHHHHHHHHHHHHHHhCc
Confidence            999999999999999999999 99999999992           34589999999999999999999999999999999 


Q ss_pred             eEEEecCCccccccceeeEecCCceeEEEeeC
Q 012990          421 KFRLRNVSETVNYRTMINLHIDGGLHVRVFHR  452 (452)
Q Consensus       421 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  452 (452)
                      ++++.++   ..+..+.++++...++|++++|
T Consensus       389 ~~~l~~~---~~~~~~~~~~~~~~lpv~~~~r  417 (418)
T 3r9b_A          389 EARLSGE---PEYKRNLTLRGMSTLSIAVHHH  417 (418)
T ss_dssp             TCEECSC---CEECSCSSBCCEEECEEEC---
T ss_pred             cceeCCC---CccccCCcccCcceeEEEecCC
Confidence            7998753   3455667778888999999887


No 66 
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00  E-value=1.7e-47  Score=355.48  Aligned_cols=348  Identities=15%  Similarity=0.147  Sum_probs=247.4

Q ss_pred             hhHHHHHHHHHHhhCC-eEEecCCceeEEecChhhHHHHHhcccccCCCCcchH-HHHHHhcCCeeEecCchhHHHhHhh
Q 012990           55 NRLHHYMTDLAAKHGT-YRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNY-SILKDLLGDGIFTVDGEKWREQRKI  132 (452)
Q Consensus        55 ~~~~~~~~~~~~~yG~-~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~-~~~~~~~g~~i~~~~g~~w~~~R~~  132 (452)
                      .+++.++.+++++ |+ +++..+ .+.++|+||+.+++|+.+. +.|++++... .......+.++++.+|+.|+++|++
T Consensus        24 ~~p~~~~~~l~~~-Gpv~~~~~~-~~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~g~~h~~~R~~  100 (396)
T 3oft_A           24 QDYFAAWKTLLDG-PGLVWSTAN-GGHWIAARGDVVRELWGDA-ERLSSQCLAVTPGLGKVMQFIPLQQDGAEHKAFRTP  100 (396)
T ss_dssp             TCHHHHHHGGGGS-CSEEEECST-TSEEEECSHHHHHHHHHCT-TTEESTTCCSSTTHHHHHCCTTTTCCHHHHHHHHHH
T ss_pred             cChHHHHHHHHhc-CCeeeecCC-CCEEEEcCHHHHHHHHcCc-ccccCCcccCCCccccccccCccccCCcHHHHHHHH
Confidence            4589999999999 75 665555 4589999999999999765 5677654221 1112223456778899999999999


Q ss_pred             hhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHH-HHhHHHHhhhccCCCCCCccCCCchhchHHHhH
Q 012990          133 SSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFM-KSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAF  211 (452)
Q Consensus       133 l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~-~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~  211 (452)
                      ++++|+...++.+.+ .+++.++++++.+.+    +..+|+...+. .++.++++. +||.+.+.       ...+.+..
T Consensus       101 ~~~~f~~~~l~~~~~-~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~-------~~~~~~~~  167 (396)
T 3oft_A          101 VMKGLASRFVVALEP-KVQAVARKLMESLRP----RGSCDFVSDFAEILPLNIFLT-LIDVPLED-------RPRLRQLG  167 (396)
T ss_dssp             HHHHTCHHHHHHHHH-HHHHHHHHHHHHHGG----GSEEEHHHHTTTTHHHHHHHH-HTTCCGGG-------HHHHHHHH
T ss_pred             hhhhhCHHHHHHHHH-HHHHHHHHHHHHhhh----cCCccHHHHHHHHHHHHHHHH-HcCCCHHH-------HHHHHHHH
Confidence            999999999999985 899999999999864    23688876664 466666665 68865431       12222222


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhHhhhh----------HHHHHHHHH
Q 012990          212 DDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMH-DFQEEYT----------SEKIVQEVK  280 (452)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~l~~~~l----------~~~l~~Ei~  280 (452)
                      ..+                  +.....++..++.+.+.+++...++++++... ++++.++          .+++..++.
T Consensus       168 ~~~------------------~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~l~~~el~~~~~  229 (396)
T 3oft_A          168 VQL------------------TRPDGSMTVEQLKQAADDYLWPFIEKRMAQPGDDLFSRILSEPVGGRPWTVDEARRMCR  229 (396)
T ss_dssp             HHH------------------HSCCSSCCHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHTSCBTTBCCCHHHHHHHHH
T ss_pred             HHH------------------hCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhccCCCCCHHHHHHHHH
Confidence            211                  11111234566777888888888888765432 2333222          445555555


Q ss_pred             HHhCCCcchhhhhhccC---------CCHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccCCCeeecCCCEEEEe
Q 012990          281 EATGAKDISDFLKVAGC---------ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQ  351 (452)
Q Consensus       281 ~~~~~~~~~~~~~~~~~---------~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~Gt~v~~~  351 (452)
                      ..+.++..++.......         ....-.++..|++|+|+|+||++|++ ...|.+.+|+++ +||.|||||.|.++
T Consensus       230 ~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~-~~~R~~~~d~~~-~g~~Ip~G~~V~~~  307 (396)
T 3oft_A          230 NLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPDLIPAAADELMRRYPTV-AVSRNAVADVDA-DGVTIRKGDLVYLP  307 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHCCCB-EEEEEESSCEEE-TTEEECTTCEEEEE
T ss_pred             HHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHHhHHHHHHHHHHhcCcc-cCceecCCCEEE-CCEEECCCCEEEeC
Confidence            54444332221111000         01122234568999999999999999 888999998887 99999999999999


Q ss_pred             hhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcce-eEEEecCCcc
Q 012990          352 AYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF-KFRLRNVSET  430 (452)
Q Consensus       352 ~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~  430 (452)
                      .+++||||++| +||++|+|+||+.         +..++|||.|+|.|+|++||++|++++++.|+++| ++++.++. +
T Consensus       308 ~~~~~rdp~~~-~dp~~F~PeR~~~---------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l~~~~-~  376 (396)
T 3oft_A          308 SVLHNLDPASF-EAPEEVRFDRGLA---------PIRHTTMGVGAHRCVGAGLARMEVIVFLREWLGGMPEFALAPDK-A  376 (396)
T ss_dssp             THHHHTCTTTS-SSTTSCCSCCCCC---------GGGSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHSCCEEECSSS-C
T ss_pred             hHHhCCCcccC-CCcCccCCCCCCC---------CCCcccCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCceECCCC-C
Confidence            99999999999 9999999999973         35799999999999999999999999999999999 99998643 3


Q ss_pred             ccccceeeEecCCceeEEEe
Q 012990          431 VNYRTMINLHIDGGLHVRVF  450 (452)
Q Consensus       431 ~~~~~~~~~~~~~~~~v~~~  450 (452)
                      +.+..+. .+....++|++.
T Consensus       377 ~~~~~~~-~~~~~~lpv~~~  395 (396)
T 3oft_A          377 VTMKGGN-VGACTALPLVWR  395 (396)
T ss_dssp             CEEECSS-BCEEEECEEEEC
T ss_pred             ceecccc-ccCcccceEEeC
Confidence            3333333 333346788775


No 67 
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00  E-value=6.9e-47  Score=349.90  Aligned_cols=346  Identities=14%  Similarity=0.112  Sum_probs=246.1

Q ss_pred             hhHHHHHHHHHHhhCC-eEEecCC----ceeEEecChhhHHHHHhcccccCCCCcchHHHH-HHhcCCeeEecCchhHHH
Q 012990           55 NRLHHYMTDLAAKHGT-YRLLGPF----RSEVYSSDPANVEYMLKTNFDNYGKGSYNYSIL-KDLLGDGIFTVDGEKWRE  128 (452)
Q Consensus        55 ~~~~~~~~~~~~~yG~-~~~~~~~----~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~-~~~~g~~i~~~~g~~w~~  128 (452)
                      .+++.++.++ ++||+ +++..++    .++++++||+++++|+.+. ..|++++...... ....+.+++..+|+.|++
T Consensus        12 ~~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   89 (384)
T 3oo3_A           12 LDPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAILADH-ERFSSMRPVDDEADRALLPGILQAYDPPDHTR   89 (384)
T ss_dssp             TEECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHHHCT-TTEECSCCCC-----CCCTTCGGGCCTTHHHH
T ss_pred             cChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHHhCc-hhccCCccccccccccccccccccCCChhHHH
Confidence            4578888899 48985 6666665    7899999999999999554 6788765443211 122345677789999999


Q ss_pred             hHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHHHHhHHHHhhhccCCCCCCccCCCchhchHH
Q 012990          129 QRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFS  208 (452)
Q Consensus       129 ~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~  208 (452)
                      +|++++++|+.+.++.+.+ .+++.++++++.+.+   .|+++|+.+.+...+.+.++..+||.+.+..       ..+.
T Consensus        90 ~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~-------~~~~  158 (384)
T 3oo3_A           90 LRRTVAPAYSARRMERLRP-RIEEIVEECLDDFES---VGAPVDFVRHAAWPIPAYIACEFLGVPRDDQ-------AELS  158 (384)
T ss_dssp             HHHHHGGGGCHHHHHHHHH-HHHHHHHHHHHHHHH---SCSSEEHHHHTTTHHHHHHHHHHHTCCGGGH-------HHHH
T ss_pred             HHHHHHHhhCHHHHHHHHH-HHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHHHcCCCHHHH-------HHHH
Confidence            9999999999999999985 899999999999975   4668999999999888888878899875421       2333


Q ss_pred             HhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhHhhhh--------HHHHHHHH
Q 012990          209 SAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMH-DFQEEYT--------SEKIVQEV  279 (452)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~l~~~~l--------~~~l~~Ei  279 (452)
                      +.+.....                  ....++..++.+.+.+++.+.+++++.+.. ++++.++        .+++..++
T Consensus       159 ~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~d~l~~ll~~~~~~l~~~~l~~~~  220 (384)
T 3oo3_A          159 RMIRESRE------------------SRLPRQRTLSGLGIVNYTKRLTSGKRRDPGDGMIGVIVREHGAEISDEELAGLA  220 (384)
T ss_dssp             HHHHHHHH------------------CSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHGGGSCHHHHHHHH
T ss_pred             HHHHHHhc------------------cCChHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhcCCCCCHHHHHHHH
Confidence            33332221                  123345556677777778777777654321 2222211        23333333


Q ss_pred             HHHhCCCcchhhhhhcc-------CC--CHHHHhhcHHHHHHHHHhhcCCCCCCC-CccccccCCccCCCeeecCCCEEE
Q 012990          280 KEATGAKDISDFLKVAG-------CI--SEEALEKMHYLHAAITETLRLYPAVPV-DAKMCFSDDTLPDGFSVRKGDMVC  349 (452)
Q Consensus       280 ~~~~~~~~~~~~~~~~~-------~~--~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~~~~~~~g~~ip~Gt~v~  349 (452)
                      ...+.++..++......       .+  ...-.++...++|||+|+||++|+++. ..|.+.+|+++ +||.|||||.|.
T Consensus       221 ~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~Ip~Gt~V~  299 (384)
T 3oo3_A          221 EGNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREKPELIDSATEEVLRHASIVEAPAPRVALADVRM-AGRDIHAGDVLT  299 (384)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCGGGHHHHHHHHHHHHCSCSCCSCEEESSCEEE-TTEEECTTCEEE
T ss_pred             HHHHHhhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHHHHHHHHHHHHhCCcccCCcceeeCCCEEE-CCEEECCCCEEE
Confidence            33332222111100000       00  000111122389999999999999986 78888888777 999999999999


Q ss_pred             EehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcce-eEEEecCC
Q 012990          350 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF-KFRLRNVS  428 (452)
Q Consensus       350 ~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~  428 (452)
                      ++.+++|+      +||++|+||||           ...++|||.|+|.|+|++||++|++++++.|+++| +|++.+++
T Consensus       300 ~~~~~~~r------~dp~~F~PeR~-----------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~  362 (384)
T 3oo3_A          300 CSMLATNR------APGDRFDITRE-----------KATHMAFGHGIHHCIGAPLARLQLRVALPAVVGRFPSLRLAVPE  362 (384)
T ss_dssp             ECHHHHHC------CTTCCCCTTCS-----------CCCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG
T ss_pred             EehhhcCC------CCcceeCCCCC-----------CCCcCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCCeeCCCC
Confidence            99999999      89999999996           34699999999999999999999999999999999 99998765


Q ss_pred             ccccccc-eeeEecCCceeEEE
Q 012990          429 ETVNYRT-MINLHIDGGLHVRV  449 (452)
Q Consensus       429 ~~~~~~~-~~~~~~~~~~~v~~  449 (452)
                      .++.+.. ..+.+....++|++
T Consensus       363 ~~~~~~~~~~~~~~~~~lpv~~  384 (384)
T 3oo3_A          363 EDLRFKPGRPAPFAVEELPLEW  384 (384)
T ss_dssp             GGCCEECSSSSCCEESCCEEEC
T ss_pred             ccceeecccccccCcceeeeeC
Confidence            5566665 66666777788764


No 68 
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00  E-value=2.7e-46  Score=349.34  Aligned_cols=356  Identities=16%  Similarity=0.138  Sum_probs=250.8

Q ss_pred             hhHHHHHHHHHHhhCCeEEec-CCceeEEecChhhHHHHHhcccccCCCCcc-----hHH-----HHHHhcCCeeEecCc
Q 012990           55 NRLHHYMTDLAAKHGTYRLLG-PFRSEVYSSDPANVEYMLKTNFDNYGKGSY-----NYS-----ILKDLLGDGIFTVDG  123 (452)
Q Consensus        55 ~~~~~~~~~~~~~yG~~~~~~-~~~~~vvv~~pe~~~~il~~~~~~~~~~~~-----~~~-----~~~~~~g~~i~~~~g  123 (452)
                      .+++.++.+++++.+++.+.. ++.+.++|++++.+++|+.+. ..|++.+.     ...     ......+.+++..||
T Consensus        38 ~~p~~~~~~lr~~gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg  116 (426)
T 3rwl_A           38 DSVGEYFKRLRKDDPVHYCADSAFGPYWSITKYNDIMHVDTNH-DIFSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAMDR  116 (426)
T ss_dssp             TCHHHHHHHHHHHCSEEEESCCTTCSEEEECSHHHHHHHHHCT-TTEECCGGGTCSSSSCCC-------CCCCCGGGCCT
T ss_pred             CCccHHHHHHHhcCCeeeccCCCCCCEEEEcCHHHHHHHHcCC-cccccccccCCCCcccccccccccccccCcccccCc
Confidence            358889999988733566655 456799999999999999876 55655431     000     112233456788899


Q ss_pred             hhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhH-HHHhHHHHhhhccCCCCCCccCCCc
Q 012990          124 EKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLF-MKSTLDSIFKVAFGVELDSVCGSNE  202 (452)
Q Consensus       124 ~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~  202 (452)
                      +.|+++|++++++|++..++.+.+ .+++.++++++.+.    .+.++|+...+ ..++.++++. +||.+.+..     
T Consensus       117 ~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~ll~~l~----~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~-----  185 (426)
T 3rwl_A          117 PRHDEQRKAVSPIVAPANLAALEG-TIRERVSKTLDGLP----VGEEFDWVDRVSIEITTQMLAT-LFDFPFEER-----  185 (426)
T ss_dssp             THHHHHHHHHGGGGCHHHHHHHHH-HHHHHHHHHHHTSC----SSSCEEHHHHTHHHHHHHHHHH-HHTCCGGGT-----
T ss_pred             hHHHHHHHHhhhhhCHHHHHHHHH-HHHHHHHHHHHHhh----cCCCcchHHHHHHHHHHHHHHH-HcCCCHHHH-----
Confidence            999999999999999999999985 88999999998773    46689988777 5777777776 799754321     


Q ss_pred             hhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHH-Hhhh-hhhHhhhh---------
Q 012990          203 EGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKK-TDQM-HDFQEEYT---------  271 (452)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~-~~l~~~~l---------  271 (452)
                        ..+.+........     ..       .......++..++.+.+.+++.++++++ +... +++++.++         
T Consensus       186 --~~~~~~~~~~~~~-----~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~dll~~ll~~~~~~~ls  251 (426)
T 3rwl_A          186 --RKLTRWSDVTTAA-----PG-------GGVVESWDQRKTELLECAAYFQVLWNERVNKDPGNDLISMLAHSPATRNMT  251 (426)
T ss_dssp             --HHHHHHHHHHTCC-----TT-------SSSCSSHHHHHHHHHHHHHHHHHHHHHHHTSCCCSSHHHHHHHCGGGGGCC
T ss_pred             --HHHHHHHHHHHhc-----cC-------ccccccHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHhcccCCCCC
Confidence              2222221111000     00       0011233455567788888999888887 3221 22333222         


Q ss_pred             HHHHHHHHHHHhCCCcchhhhhhccC---------CCHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccCCCeee
Q 012990          272 SEKIVQEVKEATGAKDISDFLKVAGC---------ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSV  342 (452)
Q Consensus       272 ~~~l~~Ei~~~~~~~~~~~~~~~~~~---------~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~i  342 (452)
                      .+++..++...+.++...+.......         ....-.++++|++++|+|+||++|+++...|.+.+|+++ +||.|
T Consensus       252 ~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E~~~l~a~i~E~LRl~p~~~~~~R~~~~d~~l-~G~~I  330 (426)
T 3rwl_A          252 PEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANPALVETMVPEIIRWQTPLAHMRRTAIADSEL-GGKTI  330 (426)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHHCSBCCEEEEESSCEEE-TTEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhChHhHHHHHHHHHHhcCccccCceecCCCeEE-CCEEE
Confidence            44455555444433322221111000         011222346799999999999999999988888888887 99999


Q ss_pred             cCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcce-e
Q 012990          343 RKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF-K  421 (452)
Q Consensus       343 p~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f-~  421 (452)
                      |||+.|+++.+++|+||++| +||++|||+||..          ..++|||.|+|.|+|++||++|++++++.|+++| +
T Consensus       331 p~G~~V~~~~~~~~rDp~~f-~dP~~F~p~R~~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~  399 (426)
T 3rwl_A          331 RKGDKVVMWYYSGNRDDEVI-DRPEEFIIDRPRP----------RQHLSFGFGIHRCVGNRLAEMQLRILWEEILTRFSR  399 (426)
T ss_dssp             CTTCEEEECHHHHTTCTTTS-SSTTSCCTTCSCT----------TCCSTTCCSTTSCSSHHHHHHHHHHHHHHHHTTCSE
T ss_pred             CCCCEEEechHHhCCCcccc-CCcCccCCCCCCC----------CCccCCCCCCcCCccHHHHHHHHHHHHHHHHHhCcc
Confidence            99999999999999999999 9999999999942          4689999999999999999999999999999999 9


Q ss_pred             EEEecCCccccccceeeEecCCceeEEEee
Q 012990          422 FRLRNVSETVNYRTMINLHIDGGLHVRVFH  451 (452)
Q Consensus       422 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  451 (452)
                      +++..+.   .+......+....++|+++|
T Consensus       400 ~~l~~~~---~~~~~~~~~g~~~lpv~~~P  426 (426)
T 3rwl_A          400 IEVMAEP---ERVRSNFVRGYAKMMVRVHA  426 (426)
T ss_dssp             EEECSCC---EECCCSSBCCEEECEEEEEC
T ss_pred             CeeCCCC---cccccccccCcceeeEEEeC
Confidence            9987532   23344455566688999875


No 69 
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00  E-value=6.7e-46  Score=340.70  Aligned_cols=339  Identities=16%  Similarity=0.142  Sum_probs=240.4

Q ss_pred             HHHHHHHHHhhCCeEEecCCceeEEecChhhHHHHHhcccccCCCCcc-----hHHHH-HH--h---cCCeeEecCchhH
Q 012990           58 HHYMTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSY-----NYSIL-KD--L---LGDGIFTVDGEKW  126 (452)
Q Consensus        58 ~~~~~~~~~~yG~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~-----~~~~~-~~--~---~g~~i~~~~g~~w  126 (452)
                      +..+.++ ++||++... +  +.+++++++++++|+.+. +.|++++.     +.... ..  +   .|.++++.+|+.|
T Consensus         2 ~~~~~~l-r~~Gpv~~~-g--~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~h   76 (368)
T 1io7_A            2 YDWFSEM-RKKDPVYYD-G--NIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSDPPLH   76 (368)
T ss_dssp             HHHHHHH-HHHCSEEEC-S--SCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCCTTHH
T ss_pred             CHHHHHH-HhcCCeEeE-C--CEEEEecHHHHHHHHcCc-ccccccccccccccccccccccccccccccccccCCChHH
Confidence            4567777 478854322 3  489999999999999875 56877653     11110 11  1   1266788899999


Q ss_pred             HHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhH-HHHhHHHHhhhccCCCCCCccCCCchhc
Q 012990          127 REQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLF-MKSTLDSIFKVAFGVELDSVCGSNEEGT  205 (452)
Q Consensus       127 ~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~  205 (452)
                      +++|++++++|+.+.++.+.+ .+++.++++++.+ +   .| ++|+.+.+ ..+++++++.+ ||.+.+..       .
T Consensus        77 ~~~R~~~~~~f~~~~~~~~~~-~i~~~~~~l~~~l-~---~g-~~d~~~~~~~~~~~~vi~~~-~G~~~~~~-------~  142 (368)
T 1io7_A           77 DELRSMSADIFSPQKLQTLET-FIRETTRSLLDSI-D---PR-EDDIVKKLAVPLPIIVISKI-LGLPIEDK-------E  142 (368)
T ss_dssp             HHHHGGGTTTTCHHHHHHHHH-HHHHHHHHHHHTC-C---TT-SEEHHHHTTTHHHHHHHHHH-HTCCGGGH-------H
T ss_pred             HHHHHHHHhhcCHHHHHHHHH-HHHHHHHHHHHHh-h---cC-CccHHHHHHHHHHHHHHHHH-hCCCHHHH-------H
Confidence            999999999999999999985 8999999999988 3   23 69999876 78999999999 99875421       2


Q ss_pred             hHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhhhh-----HHHHHHHHH
Q 012990          206 RFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYT-----SEKIVQEVK  280 (452)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~l-----~~~l~~Ei~  280 (452)
                      .+.+....+....    ..         + ...++..++.+.+.+++.+.+    +..+++++.++     .+++..++.
T Consensus       143 ~~~~~~~~~~~~~----~~---------p-~~~~~~~~~~~~~~~~~~~~i----~~~~d~l~~ll~~~l~~~ei~~~~~  204 (368)
T 1io7_A          143 KFKEWSDLVAFRL----GK---------P-GEIFELGKKYLELIGYVKDHL----NSGTEVVSRVVNSNLSDIEKLGYII  204 (368)
T ss_dssp             HHHHHGGGCTTSC----CC---------T-TCHHHHHHHHHHHHHHHHHHT----TSSCHHHHHHHTSSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHhcc----CC---------h-HHHHHHHHHHHHHHHHHHHHh----CCCCCHHHHHHhccCCHHHHHHHHH
Confidence            2322222111100    00         1 012344455666666666665    11122333222     456666666


Q ss_pred             HHhCCCcchhhhhhc--------cCCCHHH-HhhcHHHHHHHHHhhcCCCCCCCCccccccCCccCCCeeecCCCEEEEe
Q 012990          281 EATGAKDISDFLKVA--------GCISEEA-LEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQ  351 (452)
Q Consensus       281 ~~~~~~~~~~~~~~~--------~~~~~~~-~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~Gt~v~~~  351 (452)
                      ..+.++..++.....        .+ -.+. .++ .|++|+|+|+||++|+++...|.+.+|+++ +||.|||||.|.++
T Consensus       205 ~l~~AG~dTt~~~l~~~l~~L~~~P-~~~~l~~E-~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~Ip~Gt~V~~~  281 (368)
T 1io7_A          205 LLLIAGNETTTNLISNSVIDFTRFN-LWQRIREE-NLYLKAIEEALRYSPPVMRTVRKTKERVKL-GDQTIEEGEYVRVW  281 (368)
T ss_dssp             HHHHTTHHHHHHHHHHHHHHHHHTT-CHHHHHHH-TCHHHHHHHHHHHSCSBCCEEEEESSCEEE-TTEEECTTCEEEEC
T ss_pred             HHHHhhhHHHHHHHHHHHHHHHhCh-HHHHHHhc-chHHHHHHHHHHhCcccccCceeeCCCeeE-CCEEECCCCEEEec
Confidence            665555432221111        01 1111 122 589999999999999999878888888777 99999999999999


Q ss_pred             hhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhccee-EEEecCCcc
Q 012990          352 AYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFK-FRLRNVSET  430 (452)
Q Consensus       352 ~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~-~~~~~~~~~  430 (452)
                      .+++|+||++| +||++|+|||+           +..++|||.|+|.|+|++||++|++++++.|+++|+ +++.+  .+
T Consensus       282 ~~~~~rdp~~~-~dP~~F~PeR~-----------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~--~~  347 (368)
T 1io7_A          282 IASANRDEEVF-HDGEKFIPDRN-----------PNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHIEILD--TE  347 (368)
T ss_dssp             HHHHTTCTTTS-TTTTSCCTTCC-----------SCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHTTCSEEEEEE--EE
T ss_pred             HhhhCCChhhC-CCcceeCCCCC-----------CCCCcCCCCCccCCCCHHHHHHHHHHHHHHHHHhCCCCEecC--ce
Confidence            99999999999 99999999993           135899999999999999999999999999999996 99875  22


Q ss_pred             ccccceeeEecCCceeEEEeeC
Q 012990          431 VNYRTMINLHIDGGLHVRVFHR  452 (452)
Q Consensus       431 ~~~~~~~~~~~~~~~~v~~~~r  452 (452)
                        +....+.++..+++|++++|
T Consensus       348 --~~~~~~~~~~~~lpv~~~~r  367 (368)
T 1io7_A          348 --KVPNEVLNGYKRLVVRLKSN  367 (368)
T ss_dssp             --ECCCSSBCCEEEEEEEEEC-
T ss_pred             --eccCCcccCCceeEEEeccC
Confidence              23344556667899999987


No 70 
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00  E-value=1.3e-46  Score=348.66  Aligned_cols=346  Identities=16%  Similarity=0.113  Sum_probs=236.1

Q ss_pred             hHHHHHHHHHHhhC-CeEEec-CCceeEEecChhhHHHHHhcccccCC-C-Ccch--HHH----HHHhcCCeeEecCchh
Q 012990           56 RLHHYMTDLAAKHG-TYRLLG-PFRSEVYSSDPANVEYMLKTNFDNYG-K-GSYN--YSI----LKDLLGDGIFTVDGEK  125 (452)
Q Consensus        56 ~~~~~~~~~~~~yG-~~~~~~-~~~~~vvv~~pe~~~~il~~~~~~~~-~-~~~~--~~~----~~~~~g~~i~~~~g~~  125 (452)
                      +++..+.++ ++|| ++++.. ++.+.|+++|++++++++.++  .|+ + ++..  ..+    +....+.+++++   .
T Consensus        17 ~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~   90 (396)
T 1n40_A           17 RIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVVNNMGNI---A   90 (396)
T ss_dssp             SCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGGGHHHHH---H
T ss_pred             CccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCC--CcccccCccccccccccccCCchhhhhhhhH---H
Confidence            477889999 8999 577776 688999999999999999865  355 4 3211  100    111124455545   9


Q ss_pred             HHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHH-HHhHHHHhhhccCCCCCCccCCCchh
Q 012990          126 WREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFM-KSTLDSIFKVAFGVELDSVCGSNEEG  204 (452)
Q Consensus       126 w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~-~~~~~~i~~~~fG~~~~~~~~~~~~~  204 (452)
                      |+++|++++++|++. ++.+.+ .+++.++++++.+.+.   +.++|+...+. .++.++++. +||.+.+..       
T Consensus        91 h~~~R~~~~~~fs~~-~~~~~~-~i~~~~~~l~~~l~~~---~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~-------  157 (396)
T 1n40_A           91 DAGLRKAVMKAITPK-APGLEQ-FLRDTANSLLDNLITE---GAPADLRNDFADPLATALHCK-VLGIPQEDG-------  157 (396)
T ss_dssp             HTTCHHHHHHHTSSC-STTHHH-HHHHHHHHHHHHHHHH---CSCEETTTTTHHHHHHHHHHH-HHTCCGGGH-------
T ss_pred             HHHHHHHHHHhhChH-HHHhHH-HHHHHHHHHHHHHHhc---CCCccHHHHHHHHhHHHHHHH-HhCCChhhH-------
Confidence            999999999999999 999885 8999999999999752   55799987665 799999998 799876421       


Q ss_pred             chHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhhhh------------H
Q 012990          205 TRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYT------------S  272 (452)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~l------------~  272 (452)
                      ..+.+....+....     .          ....++..++.+.+ +++.+++++ .....++++.++            .
T Consensus       158 ~~~~~~~~~~~~~~-----~----------~~p~~~~~~~~~~~-~~~~~~i~~-~~~~~dll~~ll~~~~~~~~~~l~~  220 (396)
T 1n40_A          158 PKLFRSLSIAFMSS-----A----------DPIPAAKINWDRDI-EYMAGILEN-PNITTGLMGELSRLRKDPAYSHVSD  220 (396)
T ss_dssp             HHHHHTHHHHTBCC-----S----------SCCHHHHHHHHHHH-HHHHHHHHC-TTCCSHHHHHHHHHHTSGGGTTSCH
T ss_pred             HHHHHHHHHHhccc-----c----------CCCHHHHHHHHHHH-HHHHHHHhC-CCCCCCHHHHHHHhhcccccCCCCH
Confidence            23333333221110     0          00012333334444 444444430 000011111111            2


Q ss_pred             HHHHHHHHHHhCCCcchhhhhhcc-------C--CCHHHHhhcHHHHHHHHHhhcCCCCCC-CCccccccCCccCCCeee
Q 012990          273 EKIVQEVKEATGAKDISDFLKVAG-------C--ISEEALEKMHYLHAAITETLRLYPAVP-VDAKMCFSDDTLPDGFSV  342 (452)
Q Consensus       273 ~~l~~Ei~~~~~~~~~~~~~~~~~-------~--~~~~~~~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~~~~~~~g~~i  342 (452)
                      +++..++...+.++..++......       .  ....-.++..|++|+|+|+||++|+++ ...|.+.+|+++ +||.|
T Consensus       221 ~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~G~~I  299 (396)
T 1n40_A          221 ELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPELIPAGVEELLRINLSFADGLPRLATADIQV-GDVLV  299 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGGGHHHHHHHHHHTCCCBCSCEEEEESSCEEE-TTEEE
T ss_pred             HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCHHHHHHHHHHHHhhCCCcccccceecCCCeeE-CCEEE
Confidence            233333333332222111100000       0  011112234689999999999999999 678888888777 99999


Q ss_pred             cCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcce-e
Q 012990          343 RKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF-K  421 (452)
Q Consensus       343 p~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f-~  421 (452)
                      ||||.|.++.+++||||++| +||++|+||||.+          ..++|||.|+|.|+|++||++|++++++.|+++| +
T Consensus       300 p~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~~----------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~  368 (396)
T 1n40_A          300 RKGELVLVLLEGANFDPEHF-PNPGSIELDRPNP----------TSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPG  368 (396)
T ss_dssp             CTTCEEEECHHHHHTCTTTS-SSTTSCCTTCSST----------TCSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTT
T ss_pred             CCCCEEEechHHhhCChhhC-CChhhCCCCCCCC----------CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCcc
Confidence            99999999999999999999 9999999999963          3589999999999999999999999999999999 5


Q ss_pred             EEEecCCccccccceeeEecCCceeEEE
Q 012990          422 FRLRNVSETVNYRTMINLHIDGGLHVRV  449 (452)
Q Consensus       422 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~  449 (452)
                      +++.++..++.+..+.+.+...+++|++
T Consensus       369 ~~l~~~~~~~~~~~~~~~~~~~~lpv~~  396 (396)
T 1n40_A          369 VDLAVPIDQLVWRTRFQRRIPERLPVLW  396 (396)
T ss_dssp             CEESSCGGGCCBCCSBSBCCBSCCEEEC
T ss_pred             ccccCCccccccccccccCCcceeeeeC
Confidence            9997654455566667777788888874


No 71 
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00  E-value=6e-46  Score=343.80  Aligned_cols=350  Identities=13%  Similarity=0.088  Sum_probs=250.7

Q ss_pred             hHHHHHHHHHHhhCCeEEecCCceeEEecChhhHHHHHhcccccCCCCcchHHHHHH--hcCCeeEecCchhHHHhHhhh
Q 012990           56 RLHHYMTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKD--LLGDGIFTVDGEKWREQRKIS  133 (452)
Q Consensus        56 ~~~~~~~~~~~~yG~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~--~~g~~i~~~~g~~w~~~R~~l  133 (452)
                      +++.++.+++++++++++.. |  .+++++++.+++++.+.  .|+.++.+.. ...  ..+.+++..||+.|+++|+++
T Consensus        21 dp~~~~~~lr~~~pv~~~~~-g--~~~v~~~~~v~~~l~d~--~fs~~~~~~~-~~~~~~~~~~l~~~dg~~h~~~R~~~   94 (394)
T 2wiy_A           21 NPYPWYRRLQQDHPVHKLED-G--TYLVSRYADVSHFAKLP--IMSVEPGWAD-AGPWAVASDTALGSDPPHHTVLRRQT   94 (394)
T ss_dssp             CCHHHHHHHHHHCSEEECTT-S--CEEECCHHHHHHHTTST--TEECHHHHHT-CGGGGGGGGSGGGCCTTHHHHHHHHH
T ss_pred             CccHHHHHHHhcCCeEEecC-C--eEEEcCHHHHHHHHcCC--Cccccccccc-cccchhcccccccCCchHHHHHHHHH
Confidence            47888888877654554432 3  79999999999999754  4554322111 111  124567788999999999999


Q ss_pred             hcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHHHHhHHHHhhhccCCCCCCccCCCchhchHHHhHhH
Q 012990          134 SHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDD  213 (452)
Q Consensus       134 ~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~  213 (452)
                      +++|+++.++.+.+ .+++.++++++.+.    .+.++|+...+..++.++++..+||.+.+.       ...+.+.+..
T Consensus        95 ~~~fs~~~~~~~~~-~i~~~~~~l~~~~~----~~~~~d~~~~~~~~~~~vi~~~~~G~~~~~-------~~~~~~~~~~  162 (394)
T 2wiy_A           95 NKWFTPKLVDGWVR-TTRELVGDLLDGVE----AGQVIEARRDLAVVPTHVTMARVLQLPEDD-------ADAVMEAMFE  162 (394)
T ss_dssp             HTTCSHHHHHHHTH-HHHHHHHHHHHTCC----TTCCEEHHHHHTHHHHHHHHHHHHTCCCCC-------HHHHHHHHHH
T ss_pred             HhccCHHHHHHHHH-HHHHHHHHHHHHHh----ccCCeeHHHHHHhhhHHHHHHHHcCCCHhH-------HHHHHHHHHH
Confidence            99999999999985 88889999888764    356799999999999999999999986432       1333332221


Q ss_pred             HHHHHHHHHHHHHHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhHhhhh---------HHHHHHHHHHH
Q 012990          214 ASAMTLWRYVDIFWKIKKLLN-IGSEARLKQRIEVIDTFVYKIIRKKTDQMH-DFQEEYT---------SEKIVQEVKEA  282 (452)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~l~~~~l---------~~~l~~Ei~~~  282 (452)
                      ...   ....         .+ ....++..++.+.+.+++.+++++++.+.. ++++.++         .+++..++...
T Consensus       163 ~~~---~~~~---------~p~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~~~dll~~Ll~~~~~~~ls~~el~~~~~~l  230 (394)
T 2wiy_A          163 AML---MQSA---------EPADGDVDRAAVAFGYLSARVAEMLEDKRVNPGDGLADSLLDAARAGEITESEAIATILVF  230 (394)
T ss_dssp             HHG---GGSS---------SCCTTHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred             HHH---hccC---------CccchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHhhhcCCCCHHHHHHHHHHH
Confidence            110   0000         01 012234455667788888888888765433 3433322         45566666655


Q ss_pred             hCCCcchhhhhhccC-------C--CHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccCCCeeecCCCEEEEehh
Q 012990          283 TGAKDISDFLKVAGC-------I--SEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAY  353 (452)
Q Consensus       283 ~~~~~~~~~~~~~~~-------~--~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~Gt~v~~~~~  353 (452)
                      +.++..++.......       +  ...-.++.+|++++|+|+||++|+++...|.+.+|.++ +|+.||+|+.|+++.+
T Consensus       231 ~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~~l~a~i~E~LRl~pp~~~~~R~~~~d~~l-~G~~Ip~G~~V~~~~~  309 (394)
T 2wiy_A          231 YAVGHMAIGYLIASGIELFARRPEVFTAFRNDESARAAIINEMVRMDPPQLSFLRFPTEDVEI-GGVLIEAGSPIRFMIG  309 (394)
T ss_dssp             HHHTTTHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHSCSBCEEEEEESSCEEE-TTEEECTTCCEEEEHH
T ss_pred             HHhhhhhHHHHHHHHHHHHHHCHHHHHHHHhChHhHHHHHHHHHhhCCCccCeeEEECCCEEE-cCeecCCCCEEEeChH
Confidence            544443322111100       0  11112345799999999999999999888988888887 9999999999999999


Q ss_pred             hhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhccee-EEEecCCcccc
Q 012990          354 AMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFK-FRLRNVSETVN  432 (452)
Q Consensus       354 ~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~-~~~~~~~~~~~  432 (452)
                      ++||||++| +||++|||+||++.         ..++|||+|+|.|+|++||++|++++++.|+++|+ +++.++   ..
T Consensus       310 ~~~rdp~~~-~dP~~F~p~R~~~~---------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l~~~---~~  376 (394)
T 2wiy_A          310 AANRDPEVF-DDPDVFDHTRPPAA---------SRNLSFGLGPHSCAGQIISRAEATTVFAVLAERYERIELAEE---PT  376 (394)
T ss_dssp             HHTTCTTTS-SSTTSCCTTCCGGG---------SCCSTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCSCEEESSC---CE
T ss_pred             hhcCCcccC-CCccccCCCCCCCC---------CCccCCCCCCCcCCcHHHHHHHHHHHHHHHHHhCCCceECCC---Cc
Confidence            999999999 99999999999742         35899999999999999999999999999999998 998752   23


Q ss_pred             ccceeeEecCCceeEEE
Q 012990          433 YRTMINLHIDGGLHVRV  449 (452)
Q Consensus       433 ~~~~~~~~~~~~~~v~~  449 (452)
                      +..+...+....++|++
T Consensus       377 ~~~~~~~~g~~~lpv~~  393 (394)
T 2wiy_A          377 VAHNDFARRYRKLPIVL  393 (394)
T ss_dssp             ECCCSSBCCEEECEEEE
T ss_pred             ccccccccCcceeeEEe
Confidence            34444556666788876


No 72 
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00  E-value=1.3e-45  Score=338.30  Aligned_cols=336  Identities=15%  Similarity=0.137  Sum_probs=243.2

Q ss_pred             HHHHHHHHHhhCC-eEEecCCceeEEecChhhHHHHHhcccccCCCCcc-hHHHH-----H-HhcC----CeeEecCchh
Q 012990           58 HHYMTDLAAKHGT-YRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSY-NYSIL-----K-DLLG----DGIFTVDGEK  125 (452)
Q Consensus        58 ~~~~~~~~~~yG~-~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~-~~~~~-----~-~~~g----~~i~~~~g~~  125 (452)
                      +..+.+++ +||+ +++.  |  .+++++|+.+++|+.++ +.|++++. +...+     . .+.|    .++++.+|+.
T Consensus         2 ~~~~~~lr-~~gpv~~~~--g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~   75 (367)
T 3b4x_A            2 YDWFKQMR-KESPVYYDG--K--VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSDPPL   75 (367)
T ss_dssp             HHHHHHHH-HHCSEEECS--S--SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGCCTTH
T ss_pred             CHHHHHHH-HcCCceeeC--C--EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccccccCCchh
Confidence            45667774 6885 5544  3  89999999999999875 56776632 11012     2 3344    6788889999


Q ss_pred             HHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhH-HHHhHHHHhhhccCCCCCCccCCCchh
Q 012990          126 WREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLF-MKSTLDSIFKVAFGVELDSVCGSNEEG  204 (452)
Q Consensus       126 w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~  204 (452)
                      |+++|++++++|+.+.++.  + .+++.++++++.+.     | .+|+...+ ..+++++|+. +||.+ +.    .   
T Consensus        76 h~~~R~~~~~~fs~~~l~~--~-~i~~~~~~l~~~l~-----g-~~d~~~~~~~~~~~~vi~~-~~G~~-~~----~---  137 (367)
T 3b4x_A           76 HDELRNLTADAFNPSNLPV--D-FVREVTVKLLSELD-----E-EFDVIESFAIPLPILVISK-MLGIN-PD----V---  137 (367)
T ss_dssp             HHHHHHTTGGGGSGGGSCH--H-HHHHHHHHHHHTCC-----S-EEEHHHHTTTHHHHHHHHH-HHTCC-CC----H---
T ss_pred             HHHHHHHHHHhcCHhhhcc--h-HHHHHHHHHHHhcc-----C-CcchHHHHHHhhHHHHHHH-HcCCC-Cc----H---
Confidence            9999999999999999987  4 78889999988774     3 49999765 7999999999 79987 31    1   


Q ss_pred             chHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhHhhhh-----HHHHHHH
Q 012990          205 TRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM-HDFQEEYT-----SEKIVQE  278 (452)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~l~~~~l-----~~~l~~E  278 (452)
                      ..+.+....+...     +.+       .+. ..+.. ++.+.+.+++...++++++.. +++++.++     .+++..+
T Consensus       138 ~~~~~~~~~~~~~-----~~~-------~p~-~~~~~-~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~ls~~el~~~  203 (367)
T 3b4x_A          138 KKVKDWSDLVALR-----LGR-------ADE-IFSIG-RKYLELISFSKKELDSRKGKEIVDLTGKIANSNLSELEKEGY  203 (367)
T ss_dssp             HHHHHHHHHHHTT-----TTS-------TTG-GGCCC-HHHHHHHHHHHHHHHHHTTTCCSSHHHHHHTSSSCHHHHHHH
T ss_pred             HHHHHHHHHHHhc-----cCC-------Chh-hHHHH-HHHHHHHHHHHHHHHHHhcCCCCCHHHHHHhccCCHHHHHHH
Confidence            3344333332211     111       110 01112 566778888888888876543 23444332     5667777


Q ss_pred             HHHHhCCCcchhhhhhccCCCHHHHhhcH----HH-----HHHHHHhhcCCCCCCCCccccccCCccCCCeeecCCCEEE
Q 012990          279 VKEATGAKDISDFLKVAGCISEEALEKMH----YL-----HAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC  349 (452)
Q Consensus       279 i~~~~~~~~~~~~~~~~~~~~~~~~~~lp----~l-----~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~Gt~v~  349 (452)
                      +...+.++..++......  ..-.+.+ |    .+     +++|+|+||++|+++...|.+.+|.++ +||.|||||.|.
T Consensus       204 ~~~l~~AG~eTt~~~l~~--~l~~L~~-P~~~~~l~~e~~~a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~Ip~Gt~V~  279 (367)
T 3b4x_A          204 FILLMIAGNETTTNLIGN--AIEDFTL-YNSWDYVREKGALKAVEEALRFSPPVMRTIRVTKEKVKI-RDQVIDEGELVR  279 (367)
T ss_dssp             HHHHHHTTTHHHHHHHHH--HHHHHHH-TTCHHHHHHHCSHHHHHHHHHHSCSBCCEEEEESSCEEE-TTEEECTTCEEE
T ss_pred             HHHHHHhhhHHHHHHHHH--HHHHHhC-HHHHHHHHhCCchHHHHHHHHhcCcccCeeEEeCCCeEE-CCEEECCCCEEE
Confidence            777766654333211110  0011111 1    00     899999999999999888988888777 999999999999


Q ss_pred             EehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcce-eEEEecCC
Q 012990          350 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF-KFRLRNVS  428 (452)
Q Consensus       350 ~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~  428 (452)
                      ++.+++|+||++| +||++|+||||.           ..++|||.|+|.|+|++||++|++++++.|+++| ++++.++ 
T Consensus       280 ~~~~~~~rdp~~~-~dp~~F~PeR~~-----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~-  346 (367)
T 3b4x_A          280 VWIASANRDEEVF-KDPDSFIPDRTP-----------NPHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRVKEIVKK-  346 (367)
T ss_dssp             ECHHHHTTCTTTS-SSTTSCCTTCSS-----------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEEEEE-
T ss_pred             EChhhhcCCcccC-CCccccCCCCCC-----------CCCcCCCCCCccCccHHHHHHHHHHHHHHHHHhCCCceeCCc-
Confidence            9999999999999 999999999984           2589999999999999999999999999999999 6999763 


Q ss_pred             ccccccceeeEecCCceeEEEee
Q 012990          429 ETVNYRTMINLHIDGGLHVRVFH  451 (452)
Q Consensus       429 ~~~~~~~~~~~~~~~~~~v~~~~  451 (452)
                         .+..+.+.+...+++|++++
T Consensus       347 ---~~~~~~~~~~~~~lpv~~~~  366 (367)
T 3b4x_A          347 ---EKIDNEVLNGYRKLVVRVER  366 (367)
T ss_dssp             ---EECCCSSBCSEEEEEEEEEE
T ss_pred             ---cccccccccCcceEEEEecC
Confidence               33345556666789999865


No 73 
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00  E-value=3.9e-44  Score=333.17  Aligned_cols=366  Identities=14%  Similarity=0.064  Sum_probs=239.0

Q ss_pred             CCCCcccc---hHHhhhhhhhHHHHHHHHHHhhCCeEEecCCceeEEecChhhHHHHHhcccccCCCCcch--HHHHH--
Q 012990           39 KYHPIGGT---VFNQLLNFNRLHHYMTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYN--YSILK--  111 (452)
Q Consensus        39 ~~~p~~G~---~~~~~~~~~~~~~~~~~~~~~yG~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~--~~~~~--  111 (452)
                      .++|.+|-   ...+.   .+++.++.+++++.+++  +.++...++|++++.+++|+.+. ..|++....  .....  
T Consensus        18 ~~~P~~~~dp~~~~~~---~dP~~~~~~lR~~gPV~--~~~~~~~~~vt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~   91 (412)
T 4dnj_A           18 AGVPHLGIDPFALDYF---ADPYPEQETLREAGPVV--YLDKWNVYGVARYAEVYAVLNDP-LTFCSSRGVGLSDFKKEK   91 (412)
T ss_dssp             TTSCEECCCTTSHHHH---HSCHHHHHHHHHHCSSE--EETTTTEEEECSHHHHHHHHTCT-TTEESTTCSSSSCTTTSC
T ss_pred             CCCCccCCCCCCHHHH---hCcHHHHHHHHhcCCEE--EECCCCEEEECCHHHHHHHHcCC-ccccCCCccccccccccc
Confidence            45777662   23443   34888888887643344  34555689999999999999765 455432211  00000  


Q ss_pred             Hh-cCCeeEecCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccH-HHhHHHHhHHHHhhhc
Q 012990          112 DL-LGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDI-QDLFMKSTLDSIFKVA  189 (452)
Q Consensus       112 ~~-~g~~i~~~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~-~~~~~~~~~~~i~~~~  189 (452)
                      .. .+..++.+||+.|+++|++++++|+.+.++.+.+ .+++.++++++.+..   .+..+|+ .+....++.++++.+ 
T Consensus        92 ~~~~~~~~~~~Dg~~H~r~R~~~~~~Fs~~~l~~~~~-~i~~~~~~l~~~~~~---~~~~~D~v~~~~~~~~~~~i~~l-  166 (412)
T 4dnj_A           92 PWRPPSLILEADPPAHTRTRAVLSKVLSPATMKRLRD-GFAAAADAKIDELLA---RGGNIDAIADLAEAYPLSVFPDA-  166 (412)
T ss_dssp             CSSCCCTTTTCCTTHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHHHH---TTSEEETCCCCCCHHHHHHHHHH-
T ss_pred             cccCCCccccCChHHHHHHHhhcccccCHHHHHHhhH-HHHHHHHHHHHhhhc---cCCCceeHHHHHhhhhHhHHHHH-
Confidence            11 1234667899999999999999999999999995 889999999998865   3445665 445566777777766 


Q ss_pred             cCCCCCCccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhhhhh---
Q 012990          190 FGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDF---  266 (452)
Q Consensus       190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l---  266 (452)
                      +|.+....       ..+......+.....             ......+........+..++.+.+++.+...+.+   
T Consensus       167 ~g~~~~~~-------~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  226 (412)
T 4dnj_A          167 MGLKQEGR-------ENLLPYAGLVFNAFG-------------PPNELRQSAIERSAPHQAYVAEQCQRPNLAPGGFGAC  226 (412)
T ss_dssp             HTCCSTTG-------GGHHHHHHHHHHHTS-------------CSSHHHHHHHHTCHHHHHHHHHHTSGGGSCTTSHHHH
T ss_pred             cCCchhhh-------hhhhhhhhccccccc-------------ccHHHHHHHHHHHHHHHHHHHHHHHhhccccccchhh
Confidence            45443221       222222221111100             0000011111222223333333332222211111   


Q ss_pred             Hhh------hhHHHHHHHHHHHhCCCcchhhhhhccC-------C-CHHH-HhhcHHHHHHHHHhhcCCCCCCCCccccc
Q 012990          267 QEE------YTSEKIVQEVKEATGAKDISDFLKVAGC-------I-SEEA-LEKMHYLHAAITETLRLYPAVPVDAKMCF  331 (452)
Q Consensus       267 ~~~------~l~~~l~~Ei~~~~~~~~~~~~~~~~~~-------~-~~~~-~~~lp~l~a~i~E~lRl~p~~~~~~r~~~  331 (452)
                      +..      ...+++..++...+.+++.++.......       + ..+. .++..|+.++++|++|++|+++...|.++
T Consensus       227 ~~~~~~~~~l~~~e~~~~~~~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~~~~~~~~~eE~lR~~pp~~~~~R~a~  306 (412)
T 4dnj_A          227 IHAFSDTGEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRADPSLARNAFEEAVRFESPVQTFFRTTT  306 (412)
T ss_dssp             HHHTTTTTSSCTTHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHHCSBCEEEEEES
T ss_pred             hHhhhhccchhHHHHHHHHHHHHhccchhHHHHHHHHHHHHhhCHHHHHHHHhCccccccccceeeeecCCcccccccCC
Confidence            111      0134455555555544433222111100       0 0111 22346789999999999999999999999


Q ss_pred             cCCccCCCeeecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHH
Q 012990          332 SDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKI  411 (452)
Q Consensus       332 ~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~  411 (452)
                      +|+++ +|+.||+|+.|.++.+++||||++| +||++|+||||.           ..|+|||.|+|.|+|++||++|+++
T Consensus       307 ~d~~l-~G~~Ip~G~~V~~~~~a~~rDp~~f-~dP~~F~PeR~~-----------~~~lpFG~G~r~CiG~~lA~~E~~~  373 (412)
T 4dnj_A          307 RDVEL-AGATIGEGEKVLMFLGSANRDPRRW-DDPDRYDITRKT-----------SGHVGFGSGVHMCVGQLVARLEGEV  373 (412)
T ss_dssp             SCEEE-TTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTSCC-----------TTCCTTCCSTTSCTTHHHHHHHHHH
T ss_pred             CCeEE-CCccCCCCCeEEeehhhccCChhhC-CCccccCCCCCC-----------CCCCCcCCCCcCChhHHHHHHHHHH
Confidence            99887 9999999999999999999999999 999999999973           3589999999999999999999999


Q ss_pred             HHHHhhcce-eEEEecCCccccccceeeEecCCceeEEEee
Q 012990          412 YSAVLLSCF-KFRLRNVSETVNYRTMINLHIDGGLHVRVFH  451 (452)
Q Consensus       412 ~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  451 (452)
                      +++.|+++| ++++..   +..+..+.++++.+.++|+++|
T Consensus       374 ~l~~Ll~rf~~~~l~~---~~~~~~~~~~rg~~~LpV~~tP  411 (412)
T 4dnj_A          374 VLAALARKVAAIEIAG---PLKRRFNNTLRGLESLPIQLTP  411 (412)
T ss_dssp             HHHHHHHHEEEEEECS---CCEEEECSSBEEEEECEEEEEE
T ss_pred             HHHHHHHHCCCCeECC---CCeeecCCCccCCcceeEEEEe
Confidence            999999999 799865   3445556667777789999987


No 74 
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00  E-value=1.2e-44  Score=329.21  Aligned_cols=306  Identities=16%  Similarity=0.142  Sum_probs=206.2

Q ss_pred             HhhCCeEEecCCceeEEecChhhHHHHHhcccccCCCCcchHHHHHHhcCCeeEecCchhHHHhHhhhhcCCChHHHHHh
Q 012990           66 AKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDF  145 (452)
Q Consensus        66 ~~yG~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~g~~i~~~~g~~w~~~R~~l~~~fs~~~l~~~  145 (452)
                      ++||++...  |  .++++||+++++|+.++ +.|++++..... .. .+.++++.+|+.|+++|++++++|++++++.+
T Consensus         2 r~~gpv~~~--g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~-~~-~~~~l~~~~g~~~~~~R~~~~~~fs~~~l~~~   74 (343)
T 2rfb_A            2 RLNDPVHYD--G--AWHVYKYSDVKHVLMND-KIFSSNPGNRYS-NA-GGISFITMDNPEHKEFRDISAPYFLPSKINDY   74 (343)
T ss_dssp             -CCCCEEET--T--EEEECSHHHHHHHHHCT-TTEESSCSSCCC-----CCGGGGCCHHHHHHHHHHHHHHHSHHHHGGG
T ss_pred             CCcCCeeee--C--eEEEcCHHHHHHHHhCh-hhcccCCcCCCC-Cc-cccccccCCchHHHHHHHHhhhhcCHHHHHHH
Confidence            578864322  3  89999999999999876 467776421111 22 36778888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCcccHHHhH-HHHhHHHHhhhccCCCCCCccCCCchhchHHHhHhHHHHHHHHHHHH
Q 012990          146 SSAAFRKNAAKLAQLLSEAANSDKILDIQDLF-MKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVD  224 (452)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (452)
                      .+ .+++.++++++.+.       ++|+.+.+ ..+++++++.+ ||.+.+..       ..+.+....+...     ..
T Consensus        75 ~~-~i~~~~~~l~~~l~-------~~d~~~~~~~~~~~~vi~~~-~G~~~~~~-------~~~~~~~~~~~~~-----~~  133 (343)
T 2rfb_A           75 KD-FIEETSNDLIKNID-------NKDIISEYAVRLPVNIISKI-LGIPDSDM-------PLFKLWSDYIIGN-----KR  133 (343)
T ss_dssp             HH-HHHHHHHHHHTTCT-------TSCHHHHTTTHHHHHHHHHH-HTCCGGGH-------HHHHHHHHHHHTS-----CC
T ss_pred             HH-HHHHHHHHHHHhcc-------ccCHHHHHhhhhhHHHHHHH-cCCCHHHH-------HHHHHHHHHHhhc-----cC
Confidence            85 88999999987764       68998865 89999999998 99875421       2333333222111     01


Q ss_pred             HHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHhh------hhHHHHHHHHHHHhCCCcchhhhhhcc--
Q 012990          225 IFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEE------YTSEKIVQEVKEATGAKDISDFLKVAG--  296 (452)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~------~l~~~l~~Ei~~~~~~~~~~~~~~~~~--  296 (452)
                      |.+  .      ..++. ++.+.+.+++.+++  ..+ ...++++      .-.+++..++...+.++..++......  
T Consensus       134 p~~--~------~~~~~-~~~~~~~~~~~~~i--~~d-l~~ll~~~~~~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l  201 (343)
T 2rfb_A          134 DEN--F------NYVNN-RMVSRLLEIFKSDS--HGI-INVLAGSSLKNRKLTMDEKIKYIMLLIIGGNETTTNLIGNMI  201 (343)
T ss_dssp             SSH--H------HHHHH-HHHHHHHHHHHSCC--SSH-HHHHHTCBCSSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cch--h------hHHHH-HHHHHHHHHHHHHH--hcc-HHHHHhhhcCCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence            100  0      11222 44444444443322  000 1101100      002333333333322221111000000  


Q ss_pred             -----CC-CHHHHhhcHHHHHHHHHhhcCCCCC-CCCccccccCCccCCCeeecCCCEEEEehhhhcCCCCCccCCCCCC
Q 012990          297 -----CI-SEEALEKMHYLHAAITETLRLYPAV-PVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEF  369 (452)
Q Consensus       297 -----~~-~~~~~~~lp~l~a~i~E~lRl~p~~-~~~~r~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F  369 (452)
                           .+ -.+.+.+-+  +|+|+|+||++|++ +...|.+.+|+++ +||.|||||.|.++.+++|+||++| +||++|
T Consensus       202 ~~L~~~P~~~~~l~~E~--~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~Ip~Gt~V~~~~~~~~rd~~~~-~dp~~F  277 (343)
T 2rfb_A          202 RVIDENPDIIDDALKNR--SGFVEETLRYYSPIQFLPHRFAAEDSYI-NNKKIKKGDQVIVYLGSANRDETFF-DEPDLF  277 (343)
T ss_dssp             HHHHHCGGGHHHHHHCH--HHHHHHHHHHSCSBCCBCCCEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSC
T ss_pred             HHHHhCHHHHHHHHcCc--HHHHHHHHhhCcccccccceEECCCeEE-CCEEECCCCEEEEChhhhCCCcccC-CCcccc
Confidence                 00 011111111  89999999999999 9888888888777 9999999999999999999999999 999999


Q ss_pred             CCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhccee-EEEecC
Q 012990          370 KPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFK-FRLRNV  427 (452)
Q Consensus       370 ~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~-~~~~~~  427 (452)
                      +||||            ..++|||.|+|.|+|++||++|++++++.|+++|+ +++.++
T Consensus       278 ~PeR~------------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~  324 (343)
T 2rfb_A          278 KIGRR------------EMHLAFGIGIHMCLGAPLARLEASIALNDILNHFKRIKIDYK  324 (343)
T ss_dssp             CTTCS------------SCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCSCCCBCTT
T ss_pred             CCCCC------------CCCccCCCCCccCCChHHHHHHHHHHHHHHHHhCCCceeCCC
Confidence            99994            24899999999999999999999999999999996 998763


No 75 
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00  E-value=3.8e-44  Score=334.19  Aligned_cols=351  Identities=15%  Similarity=0.155  Sum_probs=240.6

Q ss_pred             hHHHHHHHHHHhhC-CeEEecCCceeEEecChhhHHHHHhcccccCCCCcchHH--------HHHHhcCCeeEecCchhH
Q 012990           56 RLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYS--------ILKDLLGDGIFTVDGEKW  126 (452)
Q Consensus        56 ~~~~~~~~~~~~yG-~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~--------~~~~~~g~~i~~~~g~~w  126 (452)
                      +++.+ . ..++|| ++.+..++.. ++|++++.+++|++++  .+........        ......+.+++..||+.|
T Consensus        34 ~P~~~-~-~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h  108 (416)
T 3p3o_A           34 FSWDS-P-EVAEAREKSWIARTPLA-LLVLRYAEADQLARDK--RLISGFRGLVDMVGTPEGPVRDFMVDFLQSLDGADH  108 (416)
T ss_dssp             CCTTS-H-HHHHHHHHCSEEECSSS-EEECSHHHHHHHHHCT--TEECSHHHHHHHHTCCSSHHHHHHHHSGGGCCHHHH
T ss_pred             CCchH-H-HHHHhCCccccccCCCc-eEEeCHHHHHHHHcCc--ccccCCccccccccccccchhhhhcCccccCCchHH
Confidence            35566 4 445677 5666655444 9999999999999875  2333221110        111223457788999999


Q ss_pred             HHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhH-HHHhHHHHhhhccCCCCCCccCCCchhc
Q 012990          127 REQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLF-MKSTLDSIFKVAFGVELDSVCGSNEEGT  205 (452)
Q Consensus       127 ~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~  205 (452)
                      +++|++++++|+++.++.+.+ .+++.++++++.+ .   .| .+|+...+ ..++.++|+. +||.+.+..       .
T Consensus       109 ~~~Rr~~~~~fs~~~l~~~~~-~i~~~~~~ll~~l-~---~g-~~d~~~~~~~~~~~~vi~~-l~G~~~~~~-------~  174 (416)
T 3p3o_A          109 RRLRGLATHPFTPRRITAVQP-FVRSTVEQLIDKL-P---QG-DFDFVQHFPHPLPALVMCQ-LLGFPLEDY-------D  174 (416)
T ss_dssp             HHHHHTTCGGGSHHHHHHHHH-HHHHHHHHHHHTC-C---SS-SEEHHHHTTTHHHHHHHHH-HHTCCGGGH-------H
T ss_pred             HHHHHHHHHhhCHHHHHHHHH-HHHHHHHHHHHhh-c---cC-CccHHHHHHHHHHHHHHHH-HhCCCHHHH-------H
Confidence            999999999999999999985 8999999999988 3   33 48966555 5699999998 588764321       2


Q ss_pred             hHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhHhhhh---------HHHH
Q 012990          206 RFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMH-DFQEEYT---------SEKI  275 (452)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~l~~~~l---------~~~l  275 (452)
                      .+.+....+....     ..      .......++..++.+.+.+++.+++++++++.. ++++.++         .+++
T Consensus       175 ~~~~~~~~~~~~~-----~~------~~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~~~dll~~ll~~~~~~~ls~~el  243 (416)
T 3p3o_A          175 TVGRLSIETNLGL-----AL------SNDQDILVKVEQGLGRMFDYLVAAIEKRKVEPGDDLTSDIVRAFHDGVLDDYEL  243 (416)
T ss_dssp             HHHHHHHTTCGGG-----TT------CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHTTSSCHHHH
T ss_pred             HHHHHHHHHHhhc-----cc------ccchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHhhccCCCCHHHH
Confidence            2222222211100     00      000122345667778888999999888775432 2333222         3444


Q ss_pred             HHHHHHHhCCCcchhhhhhccC-------C--CHHHHhhcHHHHHHHHHhhcCCCCC-CCCccccccCCccCCCeeecCC
Q 012990          276 VQEVKEATGAKDISDFLKVAGC-------I--SEEALEKMHYLHAAITETLRLYPAV-PVDAKMCFSDDTLPDGFSVRKG  345 (452)
Q Consensus       276 ~~Ei~~~~~~~~~~~~~~~~~~-------~--~~~~~~~lp~l~a~i~E~lRl~p~~-~~~~r~~~~~~~~~~g~~ip~G  345 (452)
                      ..++...+.++..++.......       +  ...-.++..|++++|+|+||++|++ ....|.+.+|.++ +|+.||||
T Consensus       244 ~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l-~G~~Ip~G  322 (416)
T 3p3o_A          244 RTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPELAPQAVEEVLRWSPTLPVTATRVAAEDFEV-NGVRIPTG  322 (416)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHSCSCSSCCEEEESSCEEE-TTEEECTT
T ss_pred             HHHHHHHHHhhccHHHHHHHHHHHHHHHCHHHHHHHHhCHHHHHHHHHHHHhhccccccCcceEeCCCeEE-CCEEECCC
Confidence            4554444433322221111000       0  0111223458999999999999999 5577888888777 99999999


Q ss_pred             CEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhccee-EEE
Q 012990          346 DMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFK-FRL  424 (452)
Q Consensus       346 t~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~-~~~  424 (452)
                      |.|+++.+++||||++| +||++|||+||..          ..++|||.|+|.|+|++||++|++++++.|+++|+ +++
T Consensus       323 ~~V~~~~~~~~rdp~~~-~dp~~F~p~R~~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l  391 (416)
T 3p3o_A          323 TPVFMCAHVAHRDPRVF-ADADRFDITVKRE----------APSIAFGGGPHFCLGTALARLELTEAVAALATRLDPPQI  391 (416)
T ss_dssp             CEEEECHHHHTTCTTTC-TTTTSCCTTCCCS----------SCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSCCEEE
T ss_pred             CEEEEChHHhcCChhcc-CCccccCCCCCCC----------CCeecCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcccc
Confidence            99999999999999999 9999999999742          35899999999999999999999999999999995 888


Q ss_pred             ecCCccccccceeeEecCCceeEEEee
Q 012990          425 RNVSETVNYRTMINLHIDGGLHVRVFH  451 (452)
Q Consensus       425 ~~~~~~~~~~~~~~~~~~~~~~v~~~~  451 (452)
                      ..+.   .+......+....++|+++|
T Consensus       392 ~~~~---~~~~~~~~~g~~~lpv~~~p  415 (416)
T 3p3o_A          392 AGEI---TWRHELGVAGPDALPLRFGA  415 (416)
T ss_dssp             CSCC---EECCCTTCCCEEECEEEESC
T ss_pred             CCCC---ceecCCCccCcceeeEEEec
Confidence            6532   34444445555678888865


No 76 
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00  E-value=3.9e-41  Score=312.21  Aligned_cols=355  Identities=11%  Similarity=0.038  Sum_probs=239.1

Q ss_pred             hhHHHHHHHHHHhhCCeEEecC-CceeEEecChhhHHHHHhcccccCCCCcchHHHHH-HhcCCeeEecCchhHHHhHhh
Q 012990           55 NRLHHYMTDLAAKHGTYRLLGP-FRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILK-DLLGDGIFTVDGEKWREQRKI  132 (452)
Q Consensus        55 ~~~~~~~~~~~~~yG~~~~~~~-~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~-~~~g~~i~~~~g~~w~~~R~~  132 (452)
                      .+++..+.++++..++-.+|.+ +...++|+.++.+++|+.+. +.|++......... ...+..++.+|++.|+++|++
T Consensus        37 ~~~~~~~~~lr~~~~~~~~~~~~~gg~W~vtr~~dv~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~D~p~H~r~Rrl  115 (417)
T 4dxy_A           37 DGYHEAWKKVQHPGIPDLIWTPFTGGHWIATNGDTVKEVYSDP-TRFSSEVIFLPKEAGEKAQMVPTKMDPPEHTPYRKA  115 (417)
T ss_dssp             GCHHHHHHHHSCTTCCSEEEESSTTSEEEECSHHHHHHHHTCT-TTEESSCCSSSTTSSCSSCTTTTTCCTTTHHHHHHH
T ss_pred             cChHHHHHHHHhhCCCCEEecCCCCCEEEECCHHHHHHHHcCc-hhccCCCcccccccccccccCcccCCcHHHHHHHHH
Confidence            3477888888777654334432 33578999999999999765 56765432210000 111223456799999999999


Q ss_pred             hhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhHHH-HhHHHHhhhccCCCCCCccCCCchhchHHHhH
Q 012990          133 SSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMK-STLDSIFKVAFGVELDSVCGSNEEGTRFSSAF  211 (452)
Q Consensus       133 l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~-~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~  211 (452)
                      ++++|++++++.+.+ .+++.++++++.+..    +..+|+...+.. ++..+++ .++|.+.+.       ...+.+..
T Consensus       116 l~~~Fs~~~l~~~~~-~i~~~~~~lld~l~~----~g~~D~v~~~a~~l~~~vi~-~llg~~~~d-------~~~~~~~~  182 (417)
T 4dxy_A          116 LDKGLNLAKIRKVED-KVREVASSLIDSFAA----RGECDFAAEYAELFPVHVFM-ALADLPLED-------IPVLSEYA  182 (417)
T ss_dssp             HHHHHCHHHHHTTHH-HHHHHHHHHHHHHHT----TSEEEHHHHTTTTHHHHHHH-HHTTCCGGG-------HHHHHHHH
T ss_pred             hhhhcCHHHHHHHHH-HHHHHHHHHHHHhhh----cCCeeeHHHHHhhhHHHHHH-HHcCCCHHH-------HHHHHhhh
Confidence            999999999999995 899999999998864    336787666654 4445554 457865432       12233222


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hHhhhh----------HHHHHHHHH
Q 012990          212 DDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHD-FQEEYT----------SEKIVQEVK  280 (452)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~~~~l----------~~~l~~Ei~  280 (452)
                      ..+....            ...+........++.+.+..++..++++++....+ ++...+          .+++..++.
T Consensus       183 ~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~li~~rr~~~~ddl~s~L~~~~~~~~~~~~~e~~~~~~  250 (417)
T 4dxy_A          183 RQMTRPE------------GNTPEEMATDLEAGNNGFYAYVDPIIRARVGGDGDDLITLMVNSEINGERIAHDKAQGLIS  250 (417)
T ss_dssp             HHHHSCC------------CSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHTCEETTEECCHHHHHHHHH
T ss_pred             hhhcccc------------ccChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhccccccCCccchhHHHHHHH
Confidence            2211100            00011223455567778889999999888765433 322221          566666666


Q ss_pred             HHhCCCcchhhhhhccC-------C-CHHHHhhcHHHHHHHHHhhcCCCCCCCCccccccCCccCCCeeecCCCEEEEeh
Q 012990          281 EATGAKDISDFLKVAGC-------I-SEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQA  352 (452)
Q Consensus       281 ~~~~~~~~~~~~~~~~~-------~-~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~Gt~v~~~~  352 (452)
                      ..+.+++.++.......       + ..+.+.+-|++-....|.+|++++.+...|++++|+++ +|+.||+|+.|.+++
T Consensus       251 ~ll~AG~eTTa~~l~~~~~~L~~~P~~~~~l~~e~~~~~~avee~~~~~~~~~~~R~a~~d~~l-~G~~Ip~G~~V~~~~  329 (417)
T 4dxy_A          251 LLLLGGLDTVVNFLSFFMIHLARHPELVAELRSDPLKLMRGAEEMFRRFPVVSEARMVAKDQEY-KGVFLKRGDMILLPT  329 (417)
T ss_dssp             HHHHHTTHHHHHHHHHHHHHHHTCHHHHHHHHHCHHHHHHTHHHHHHHSCCBEEEEEECSCEEE-TTEEECTTCEEEEET
T ss_pred             HHHhhcccchhhHHHHHHHHHHhCchhhhhhccCccccccceeeeeccccccccccccccceEe-cCccccCCCEEEEee
Confidence            66555543332111100       0 12333344555555556666666666788999999887 999999999999999


Q ss_pred             hhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHHHHHHhhcce-eEEEecCCccc
Q 012990          353 YAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF-KFRLRNVSETV  431 (452)
Q Consensus       353 ~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~  431 (452)
                      +++||||++| +||++|||+|+           ...|+|||.|+|.|+|++||++|++++++.||++| ++++.+++.  
T Consensus       330 ~a~~rDp~~f-~dP~~FdpeR~-----------~~~~l~FG~G~r~ClG~~LA~~E~~i~l~~Ll~rfp~~~l~~~~~--  395 (417)
T 4dxy_A          330 ALHGLDDAAN-PEPWKLDFSRR-----------SISHSTFGGGPHRCAGMHLARMEVIVTLEEWLKRIPEFSFKEGET--  395 (417)
T ss_dssp             HHHHTCTTTS-SSTTSCCTTCS-----------CCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCSSCEECTTCC--
T ss_pred             hhhcCChhhC-CCccccCCCCC-----------CCCCCCcCCCcccCccHHHHHHHHHHHHHHHHHhCCCceeCCCCC--
Confidence            9999999999 99999999993           34689999999999999999999999999999999 899976532  


Q ss_pred             cccceeeEecCCceeEEEe
Q 012990          432 NYRTMINLHIDGGLHVRVF  450 (452)
Q Consensus       432 ~~~~~~~~~~~~~~~v~~~  450 (452)
                      .+..+...+..+.++|++-
T Consensus       396 ~~~~~~~~~g~~~LPv~~~  414 (417)
T 4dxy_A          396 PIYHSGIVAAVENVPLVWP  414 (417)
T ss_dssp             CEEECSSBCEEECCEEECC
T ss_pred             eeecCCcccCceeeeEEee
Confidence            2333334445557888873


No 77 
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00  E-value=1.1e-40  Score=302.21  Aligned_cols=324  Identities=13%  Similarity=0.091  Sum_probs=196.8

Q ss_pred             CCCC-CCCCCcccchHHhhh--hhhhHHHHHHHHHHhhCCeEEecCCceeEEecChhhHHHHHhcccccCCCCcc-h-HH
Q 012990           34 GNKQ-KKYHPIGGTVFNQLL--NFNRLHHYMTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSY-N-YS  108 (452)
Q Consensus        34 ~~pg-P~~~p~~G~~~~~~~--~~~~~~~~~~~~~~~yG~~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~-~-~~  108 (452)
                      .||| ++++|++|....++.  ...+++.++.+++++ ++++..   ...+++++++.+++|+.++  .|++.+. + ..
T Consensus        35 ~ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~-pV~~~~---~~~~vv~~~~~v~~vl~d~--~f~~~~~~~~~~  108 (381)
T 2yjn_B           35 MIRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES-GVRRSR---TETWVVADHATARQVLDDP--AFTRATGRTPEW  108 (381)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH-CEEECS---SSCEEECSHHHHHHHHHCS--SEESSCCCCCHH
T ss_pred             CCCcccccccccCCchhhcCchhccCchHHHHHHHhC-CceeCC---CCEEEEcCHHHHHHHHcCC--CcCCCccccccc
Confidence            4677 447899998766432  123578899999988 655433   3589999999999999863  5665432 1 11


Q ss_pred             H------HHHhcCCeeEecCchhHHHhHhhhhcCCChHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCcccHHHhH-HHHh
Q 012990          109 I------LKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLF-MKST  181 (452)
Q Consensus       109 ~------~~~~~g~~i~~~~g~~w~~~R~~l~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~-~~~~  181 (452)
                      .      +.. ++.++++.||+.|       +++|+     . . ..+++.++++++.+.     | .+|+...+ ..++
T Consensus       109 ~~~~~~~~~~-~~~~l~~~dg~~H-------~~~Ft-----~-~-~~i~~~~~~ll~~~~-----g-~~Dl~~~~a~~l~  167 (381)
T 2yjn_B          109 MRAAGAPPAE-WAQPFRDVHAASW-------EGEVP-----D-V-GELAESFAGLLPGAG-----A-RLDLVGDFAWQVP  167 (381)
T ss_dssp             HHHHTCCHHH-HTHHHHHHHHCCC-------CSCCC-----C-C-SCHHHHTSTTSCC------------CCCCCCTHHH
T ss_pred             ccccccccch-hhhhhhhCCchhh-------hhccC-----C-h-HHHHHHHHHHHHhcc-----C-cchHHHHHHHHHH
Confidence            0      112 2456777899999       67788     2 4 367888888888775     2 68988666 6999


Q ss_pred             HHHHhhhccCCCCCCccCCCchhchHHHhHhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHH-HHHHHHHHHHH
Q 012990          182 LDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVID-TFVYKIIRKKT  260 (452)
Q Consensus       182 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~  260 (452)
                      +++|+.+ ||.+.+..        .+.+.+....        .  +   . ......++..+..+.+. +.+..++-...
T Consensus       168 ~~vi~~l-~G~~~~~~--------~~~~~~~~~~--------~--~---~-~~~~~~~~~~~~~~~l~~~~~~~ll~aG~  224 (381)
T 2yjn_B          168 VQGMTAV-LGAAGVLR--------GAAWDARVSL--------D--A---Q-LSPQQLAVTEAAVAALPADPALRALFAGA  224 (381)
T ss_dssp             HHHHHTC------CCH--------HHHHHHTTHH--------H--H---T-TSCCCHHHHHHHHHHCC--CHHHHHHHHH
T ss_pred             HHHHHHH-cCCCHHHH--------HHHHHHHHhc--------c--C---C-CCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999995 99876421        1211111100        0  0   0 11111111111111111 00111111000


Q ss_pred             hhhhhhHhh---hh------HHHHHHHHHHHhCCCcchhhhhhccCCCHHHHhhcHHHHHHHHHhhcCCCCCCCCccccc
Q 012990          261 DQMHDFQEE---YT------SEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCF  331 (452)
Q Consensus       261 ~~~~~l~~~---~l------~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~  331 (452)
                      +.....+..   ++      ++++++|                           ..|++++|+|+||++|+++...|.+.
T Consensus       225 eTt~~~l~~~l~~L~~~P~~~~~l~~e---------------------------~~~l~~~i~E~LR~~pp~~~~~R~a~  277 (381)
T 2yjn_B          225 EMTANTVVDAVLAVSAEPGLAERIADD---------------------------PAAAQRTVAEVLRLHPALHLERRTAT  277 (381)
T ss_dssp             HHHHHHHHHHHHHHHHCHHHHHHHHHC---------------------------CC--HHHHHHHHHHSCSCSEEEEEES
T ss_pred             hHHHHHHHHHHHHHHHCHHHHHHHhhC---------------------------HHHHHHHhCeeeeecCCCcceeEEEC
Confidence            110000000   01      3333332                           22899999999999999998888888


Q ss_pred             cCCccCCCeeecCCCEEEEehhhhcCCCCCccCCCCCCCCCCCCCCCCCcccCCCCccccccCCCCCCcchHHHHHHHHH
Q 012990          332 SDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKI  411 (452)
Q Consensus       332 ~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~  411 (452)
                      +|.++ +|+.||||+.|+++.+++|+||++| +||++|||+||++          ..++|||.| |.|+|++||++|+++
T Consensus       278 ~d~~l-~G~~Ip~G~~V~~~~~~~~rDp~~~-~dp~~F~p~R~~~----------~~~l~FG~G-h~C~G~~lA~~e~~~  344 (381)
T 2yjn_B          278 AEVRL-GEHVIGEGEEVVVVVAAANRDPEVF-AEPDRLDVDRPDA----------DRALSAHRG-HPGRLEELVTALATA  344 (381)
T ss_dssp             SCEES-SSCEECTTCEEEEEHHHHTTCTTTS-SSTTSCCSSCSCC----------CCCCC-----CCSSHHHHHHHHHHH
T ss_pred             CCeEE-CCEEECCCCEEEeCHHHHcCCcccC-CCccccCCCCCCC----------CCccCCCCC-CCCchHHHHHHHHHH
Confidence            88777 9999999999999999999999999 9999999999963          358999999 999999999999999


Q ss_pred             HHHHhhcce-eEEEecCCccccccceeeEecCCceeEEE
Q 012990          412 YSAVLLSCF-KFRLRNVSETVNYRTMINLHIDGGLHVRV  449 (452)
Q Consensus       412 ~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  449 (452)
                      +++.|+++| ++++..+.  +.+..+.+++....++|++
T Consensus       345 ~l~~ll~~~p~~~l~~~~--~~~~~~~~~r~~~~LpV~l  381 (381)
T 2yjn_B          345 ALRAAAKALPGLTPSGPV--VRRRRSPVLRGTNRCPVEL  381 (381)
T ss_dssp             HHHHTTTTCCC-----CC--EECTTCSSSCCEEECCCC-
T ss_pred             HHHHHHHhCCCcEECCCC--cccccCcccCCCccceeeC
Confidence            999999999 99987643  3444455556656666653


No 78 
>1jdm_A Sarcolipin; helix, membrane protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=46.98  E-value=26  Score=17.39  Aligned_cols=18  Identities=11%  Similarity=0.401  Sum_probs=7.6

Q ss_pred             HHHHHHHHHH-HHHhhhhc
Q 012990           12 ALAIALAILV-VQIVTKTL   29 (452)
Q Consensus        12 ~~~~~l~~~~-~~~~~~~~   29 (452)
                      -+.+++++++ .+++.|.+
T Consensus        11 NFt~vLI~vlLi~llVrsy   29 (31)
T 1jdm_A           11 NFTIVLITVILMWLLVRSY   29 (31)
T ss_dssp             HHHHHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHHHHHHHHhh
Confidence            3444444433 44444443


No 79 
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=46.75  E-value=17  Score=21.72  Aligned_cols=15  Identities=0%  Similarity=0.029  Sum_probs=7.8

Q ss_pred             HHHhhhhcccccCCC
Q 012990           22 VQIVTKTLTQKSGNK   36 (452)
Q Consensus        22 ~~~~~~~~~~~~~~p   36 (452)
                      ..++...+.+|+.+|
T Consensus        31 ~~LwK~GFFkR~~~~   45 (54)
T 2knc_A           31 LAMWKVGFFKRNRPP   45 (54)
T ss_dssp             HHHHHHHHTTTTCCS
T ss_pred             HHHHHcCcccCCCCC
Confidence            344445566665554


No 80 
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=44.60  E-value=27  Score=19.75  Aligned_cols=6  Identities=0%  Similarity=0.368  Sum_probs=2.4

Q ss_pred             HHhhhh
Q 012990           23 QIVTKT   28 (452)
Q Consensus        23 ~~~~~~   28 (452)
                      .|++|+
T Consensus        33 ~~~RRR   38 (44)
T 2jwa_A           33 ILIKRR   38 (44)
T ss_dssp             HHHHHH
T ss_pred             hheehh
Confidence            333443


No 81 
>3bej_E Nuclear receptor coactivator 1; FXR, BAR, NR1H4, bIle acid receptor, NHR, alternative splicing, DNA-binding, metal-binding nucleus, repressor; HET: MUF; 1.90A {Homo sapiens} PDB: 1fm9_B* 1k74_B* 1fm6_B* 1p8d_C* 1rdt_B* 1nrl_C* 3ipq_B* 3ips_C* 3ipu_C* 4dm6_E* 4dm8_C* 3kmg_B* 2hfp_B* 1k7l_B*
Probab=35.83  E-value=37  Score=16.13  Aligned_cols=21  Identities=14%  Similarity=0.102  Sum_probs=18.0

Q ss_pred             CcchHHHHHHHHHHHHHhhcc
Q 012990          399 CLGKEFAYRQMKIYSAVLLSC  419 (452)
Q Consensus       399 C~G~~lA~~e~~~~l~~ll~~  419 (452)
                      |+..+-...|-.-+|..||++
T Consensus         1 cpss~~sL~EkHkILHrLLQ~   21 (26)
T 3bej_E            1 CPSSHSSLTERHKILHRLLQE   21 (26)
T ss_pred             CCCchhhHHHHHHHHHHHHHc
Confidence            777888889999999999885


No 82 
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=34.70  E-value=34  Score=20.33  Aligned_cols=15  Identities=7%  Similarity=0.062  Sum_probs=7.5

Q ss_pred             HHHhhhhcccccCCC
Q 012990           22 VQIVTKTLTQKSGNK   36 (452)
Q Consensus        22 ~~~~~~~~~~~~~~p   36 (452)
                      ..++...+.+|+.++
T Consensus        28 ~~LwK~GFFKR~~~~   42 (54)
T 2l8s_A           28 LALWKIGFFKRPLKK   42 (54)
T ss_dssp             HHHHHHHHTTSCCSC
T ss_pred             HHHHHcCcccCCCcc
Confidence            344444566665543


No 83 
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=26.59  E-value=35  Score=28.60  Aligned_cols=30  Identities=13%  Similarity=0.225  Sum_probs=23.8

Q ss_pred             cCCCEEEEehhhhcCCCCCccCCC--------------CCCCCCC
Q 012990          343 RKGDMVCYQAYAMGRMKFIWGDDA--------------EEFKPER  373 (452)
Q Consensus       343 p~Gt~v~~~~~~~~~d~~~~g~~p--------------~~F~P~R  373 (452)
                      |.||.|+.....-+.||+.| .+|              -.|||..
T Consensus        64 ~~GTLvmPt~t~~~~dp~~w-~~ppvp~~~~~~ir~~~p~fDp~~  107 (268)
T 3ijw_A           64 EEGTIIMPTQSSDLSDPKHW-SRPPVPEEWWQIIRDNVPAFEPHI  107 (268)
T ss_dssp             TTSEEEEECCCGGGSCGGGC-CSSCCCHHHHHHHHHHSCCBCTTT
T ss_pred             CCCeEEEeccccccCChhhh-cCCCCcHHHHHHHHhhCCCCCccc
Confidence            68888888776677899999 787              3688876


No 84 
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=23.95  E-value=93  Score=17.39  Aligned_cols=10  Identities=20%  Similarity=0.514  Sum_probs=4.6

Q ss_pred             cccchHHHHH
Q 012990            6 IPFSFKALAI   15 (452)
Q Consensus         6 ~~~~~~~~~~   15 (452)
                      .+++.+++++
T Consensus         8 vp~wiIi~s~   17 (42)
T 2k1a_A            8 IPIWWVLVGV   17 (42)
T ss_dssp             CCHHHHHHHH
T ss_pred             cchHHHHHHH
Confidence            4555444433


No 85 
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=23.57  E-value=41  Score=28.32  Aligned_cols=23  Identities=13%  Similarity=0.131  Sum_probs=18.7

Q ss_pred             cCCCEEEEehhhhcCCCCCccCCC
Q 012990          343 RKGDMVCYQAYAMGRMKFIWGDDA  366 (452)
Q Consensus       343 p~Gt~v~~~~~~~~~d~~~~g~~p  366 (452)
                      |.||.|+.....-+.||..| .+|
T Consensus        62 ~~GTLvmPtft~~~~dp~~w-~~~   84 (273)
T 2nyg_A           62 EEGTIVMPSQSVELSDPKEW-GNP   84 (273)
T ss_dssp             TTSEEEEECCCTTSSCGGGC-CSS
T ss_pred             CCCeEEEeccccccCChhhh-cCC
Confidence            58888888877778888888 776


No 86 
>1vf5_H Protein PET N; photosynthesis, membrane protein complex, electron transfer complex; HET: HEM TDS PL9 OPC CLA BCR; 3.00A {Mastigocladus laminosus} SCOP: f.23.27.1 PDB: 2d2c_H* 2e74_H* 2e75_H* 2e76_H* 2zt9_H*
Probab=23.27  E-value=61  Score=16.23  Aligned_cols=13  Identities=8%  Similarity=0.079  Sum_probs=6.1

Q ss_pred             CCccccccchHHH
Q 012990            1 MDFLSIPFSFKAL   13 (452)
Q Consensus         1 m~~~~~~~~~~~~   13 (452)
                      ||+.+..|..+..
T Consensus         1 mdivsl~Waalmv   13 (29)
T 1vf5_H            1 MEIDVLGWVALLV   13 (29)
T ss_dssp             --CTTHHHHHHHH
T ss_pred             CcchhHHHHHHHH
Confidence            6666666654333


No 87 
>1jb0_M Photosystem 1 reaction centre subunit XII; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: f.23.19.1 PDB: 3pcq_M*
Probab=23.07  E-value=72  Score=16.43  Aligned_cols=23  Identities=9%  Similarity=0.070  Sum_probs=10.4

Q ss_pred             CCccccccchHHHHHHHHHHHHH
Q 012990            1 MDFLSIPFSFKALAIALAILVVQ   23 (452)
Q Consensus         1 m~~~~~~~~~~~~~~~l~~~~~~   23 (452)
                      |++...+...++++.+...++..
T Consensus         1 m~Isd~Qi~iAL~~Al~~~iLA~   23 (31)
T 1jb0_M            1 MALTDTQVYVALVIALLPAVLAF   23 (31)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHHH
Confidence            44444444444444444444333


Done!