Query 012991
Match_columns 452
No_of_seqs 131 out of 2024
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 08:25:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012991.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012991hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0520 csdA Selenocysteine ly 100.0 3.6E-53 7.7E-58 412.6 36.1 383 23-441 2-404 (405)
2 PRK09295 bifunctional cysteine 100.0 1.4E-45 3.1E-50 366.5 37.0 383 22-441 1-403 (406)
3 PRK10874 cysteine sulfinate de 100.0 2.8E-45 6.1E-50 364.0 37.6 382 23-442 3-398 (401)
4 COG1104 NifS Cysteine sulfinat 100.0 1.8E-45 3.8E-50 344.8 33.3 368 40-443 2-378 (386)
5 TIGR03392 FeS_syn_CsdA cystein 100.0 2.7E-45 5.8E-50 363.8 36.6 380 25-442 2-395 (398)
6 PLN02855 Bifunctional selenocy 100.0 1.5E-44 3.4E-49 360.9 36.4 381 27-442 15-418 (424)
7 TIGR01979 sufS cysteine desulf 100.0 1.5E-42 3.2E-47 345.0 36.1 379 28-442 2-401 (403)
8 KOG1549 Cysteine desulfurase N 100.0 2.6E-42 5.7E-47 324.2 32.2 407 7-451 8-427 (428)
9 PF00266 Aminotran_5: Aminotra 100.0 4E-42 8.8E-47 337.9 30.6 356 41-432 1-371 (371)
10 PLN02651 cysteine desulfurase 100.0 1.2E-40 2.6E-45 326.3 33.4 352 41-430 1-364 (364)
11 TIGR03402 FeS_nifS cysteine de 100.0 2.4E-40 5.3E-45 326.3 35.5 363 41-442 1-372 (379)
12 TIGR01976 am_tr_V_VC1184 cyste 100.0 2.4E-40 5.3E-45 328.5 35.4 373 26-436 3-397 (397)
13 PLN02724 Molybdenum cofactor s 100.0 9.3E-41 2E-45 354.5 31.4 397 23-441 18-487 (805)
14 TIGR01814 kynureninase kynuren 100.0 9.4E-40 2E-44 324.4 35.9 364 24-440 8-405 (406)
15 TIGR01977 am_tr_V_EF2568 cyste 100.0 1.2E-39 2.5E-44 321.4 35.6 363 41-438 1-375 (376)
16 TIGR03403 nifS_epsilon cystein 100.0 3.4E-39 7.4E-44 318.4 35.7 366 41-442 1-375 (382)
17 cd06453 SufS_like Cysteine des 100.0 6.9E-39 1.5E-43 315.5 33.6 359 41-436 1-373 (373)
18 TIGR02006 IscS cysteine desulf 100.0 2.6E-38 5.6E-43 313.7 35.8 366 40-443 4-378 (402)
19 PRK02948 cysteine desulfurase; 100.0 4.7E-38 1E-42 310.3 36.2 364 40-442 1-374 (381)
20 PLN02409 serine--glyoxylate am 100.0 2.8E-37 6E-42 305.5 29.4 353 40-442 9-372 (401)
21 PRK14012 cysteine desulfurase; 100.0 1.7E-35 3.7E-40 293.8 34.7 364 40-443 4-380 (404)
22 TIGR03235 DNA_S_dndA cysteine 100.0 7.4E-35 1.6E-39 284.5 31.9 320 42-396 1-326 (353)
23 cd06451 AGAT_like Alanine-glyo 100.0 3E-35 6.6E-40 287.7 29.0 343 46-441 5-356 (356)
24 TIGR02326 transamin_PhnW 2-ami 100.0 5.7E-34 1.2E-38 279.3 31.2 344 45-441 8-361 (363)
25 COG0075 Serine-pyruvate aminot 100.0 2.1E-33 4.6E-38 265.8 32.8 350 41-443 7-364 (383)
26 PRK03080 phosphoserine aminotr 100.0 7.6E-34 1.6E-38 278.6 26.6 348 36-442 9-373 (378)
27 TIGR01788 Glu-decarb-GAD gluta 100.0 2.7E-33 5.9E-38 275.6 30.2 379 18-442 16-429 (431)
28 PRK13479 2-aminoethylphosphona 100.0 2.7E-32 5.8E-37 268.0 31.6 345 46-442 11-363 (368)
29 PRK02769 histidine decarboxyla 100.0 7.6E-32 1.6E-36 262.1 29.4 339 37-442 20-372 (380)
30 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 1.5E-31 3.2E-36 261.6 31.8 339 48-439 7-354 (355)
31 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 2.7E-31 5.9E-36 261.9 32.0 358 36-442 16-381 (387)
32 cd00611 PSAT_like Phosphoserin 100.0 5.1E-32 1.1E-36 263.6 24.1 340 46-440 5-354 (355)
33 TIGR01364 serC_1 phosphoserine 100.0 1.2E-31 2.5E-36 259.1 26.0 334 50-441 2-347 (349)
34 PRK13520 L-tyrosine decarboxyl 100.0 8.7E-31 1.9E-35 257.8 30.4 336 42-441 24-370 (371)
35 PRK05355 3-phosphoserine/phosp 100.0 2E-31 4.3E-36 258.8 25.4 342 43-442 6-358 (360)
36 COG0436 Aspartate/tyrosine/aro 100.0 3.2E-30 7E-35 252.1 29.3 342 38-442 28-391 (393)
37 PTZ00094 serine hydroxymethylt 100.0 2.2E-30 4.8E-35 259.7 26.5 353 37-442 33-408 (452)
38 TIGR01822 2am3keto_CoA 2-amino 100.0 5E-29 1.1E-33 247.1 34.1 342 36-442 36-389 (393)
39 TIGR03812 tyr_de_CO2_Arch tyro 100.0 1.1E-29 2.5E-34 250.0 29.1 334 43-438 25-372 (373)
40 cd00613 GDC-P Glycine cleavage 100.0 1.8E-29 3.9E-34 250.7 30.4 352 36-436 18-398 (398)
41 cd06450 DOPA_deC_like DOPA dec 100.0 2.3E-30 5E-35 252.2 23.4 296 76-438 34-344 (345)
42 TIGR01366 serC_3 phosphoserine 100.0 4.1E-30 9E-35 250.1 24.7 338 47-442 10-360 (361)
43 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 6.1E-29 1.3E-33 243.8 31.2 355 38-442 6-368 (370)
44 PLN03032 serine decarboxylase; 100.0 2.3E-29 5E-34 242.8 27.4 329 40-438 24-372 (374)
45 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 5E-29 1.1E-33 244.0 29.7 344 48-440 10-360 (361)
46 COG3844 Kynureninase [Amino ac 100.0 7.1E-28 1.5E-32 215.7 31.4 361 26-444 19-404 (407)
47 cd06454 KBL_like KBL_like; thi 100.0 4.5E-28 9.8E-33 236.5 31.0 335 40-439 3-348 (349)
48 PRK07179 hypothetical protein; 100.0 1E-27 2.3E-32 238.3 33.8 334 37-443 53-399 (407)
49 PRK07681 aspartate aminotransf 100.0 2.7E-28 5.8E-33 241.9 28.9 335 36-439 30-385 (399)
50 PRK06108 aspartate aminotransf 100.0 9.7E-28 2.1E-32 237.0 31.8 336 38-441 24-381 (382)
51 KOG2862 Alanine-glyoxylate ami 100.0 5.7E-28 1.2E-32 214.9 26.5 352 38-443 16-383 (385)
52 PRK06225 aspartate aminotransf 100.0 1E-27 2.2E-32 236.4 30.2 338 37-442 27-376 (380)
53 PLN03026 histidinol-phosphate 100.0 1.5E-27 3.3E-32 234.5 31.0 335 23-439 37-379 (380)
54 TIGR01141 hisC histidinol-phos 100.0 5.3E-28 1.1E-32 235.6 27.4 319 37-437 18-346 (346)
55 PRK00451 glycine dehydrogenase 100.0 1.5E-27 3.2E-32 240.2 31.5 350 39-440 69-446 (447)
56 PRK08960 hypothetical protein; 100.0 8.3E-28 1.8E-32 237.5 29.0 342 30-440 25-385 (387)
57 PRK05957 aspartate aminotransf 100.0 2.7E-27 5.9E-32 233.8 32.6 348 29-442 19-385 (389)
58 PLN02414 glycine dehydrogenase 100.0 2E-27 4.4E-32 250.9 32.8 323 76-444 564-909 (993)
59 PTZ00377 alanine aminotransfer 100.0 9.5E-28 2E-32 242.9 28.7 384 11-443 10-476 (481)
60 PRK02731 histidinol-phosphate 100.0 3.1E-27 6.8E-32 232.0 31.3 335 24-442 20-366 (367)
61 PRK06207 aspartate aminotransf 100.0 1.8E-27 4E-32 235.9 29.9 344 37-442 38-402 (405)
62 PRK09276 LL-diaminopimelate am 100.0 1.2E-27 2.5E-32 236.5 28.0 340 31-438 24-384 (385)
63 TIGR03540 DapC_direct LL-diami 100.0 2.3E-27 4.9E-32 234.2 28.5 335 36-438 27-382 (383)
64 TIGR00858 bioF 8-amino-7-oxono 100.0 6.8E-27 1.5E-31 229.1 31.2 335 36-437 14-360 (360)
65 PRK14807 histidinol-phosphate 100.0 4.1E-27 8.9E-32 229.4 29.4 321 39-440 23-350 (351)
66 PRK07324 transaminase; Validat 100.0 8.4E-28 1.8E-32 235.9 24.6 338 33-442 21-370 (373)
67 PRK08056 threonine-phosphate d 100.0 4.1E-27 9E-32 229.8 29.4 338 24-442 6-355 (356)
68 PRK00950 histidinol-phosphate 100.0 2.6E-27 5.6E-32 232.1 28.1 335 23-441 19-361 (361)
69 PRK08361 aspartate aminotransf 100.0 2.9E-27 6.3E-32 234.0 28.4 336 38-441 33-389 (391)
70 PRK07682 hypothetical protein; 100.0 3.7E-27 8E-32 232.3 28.7 337 38-442 20-376 (378)
71 PRK06939 2-amino-3-ketobutyrat 100.0 1.3E-26 2.8E-31 230.3 32.7 343 36-442 40-393 (397)
72 PRK03158 histidinol-phosphate 100.0 5.1E-27 1.1E-31 229.8 29.3 330 23-439 16-358 (359)
73 PRK04366 glycine dehydrogenase 100.0 1.4E-26 3.1E-31 233.2 33.3 372 24-443 49-449 (481)
74 PLN00145 tyrosine/nicotianamin 100.0 1.3E-26 2.8E-31 231.0 32.0 350 37-445 51-427 (430)
75 PRK13392 5-aminolevulinate syn 100.0 2E-26 4.3E-31 229.3 33.0 340 39-442 47-397 (410)
76 PLN00175 aminotransferase fami 100.0 8.9E-27 1.9E-31 231.3 30.3 339 37-441 53-412 (413)
77 PLN02822 serine palmitoyltrans 100.0 3.5E-26 7.5E-31 230.0 34.2 353 36-442 107-477 (481)
78 PTZ00433 tyrosine aminotransfe 100.0 1.1E-26 2.4E-31 231.2 30.3 343 36-444 31-410 (412)
79 PRK05942 aspartate aminotransf 100.0 7.7E-27 1.7E-31 231.1 29.1 335 36-441 33-388 (394)
80 PRK09105 putative aminotransfe 100.0 8.8E-27 1.9E-31 228.1 29.0 317 38-441 43-369 (370)
81 PRK05764 aspartate aminotransf 100.0 1.5E-26 3.3E-31 229.3 30.9 341 36-442 29-391 (393)
82 PRK05958 8-amino-7-oxononanoat 100.0 4E-26 8.7E-31 225.8 33.1 336 36-439 37-384 (385)
83 PRK07366 succinyldiaminopimela 100.0 7E-27 1.5E-31 231.1 27.4 339 34-439 26-387 (388)
84 PRK01533 histidinol-phosphate 100.0 9.1E-27 2E-31 227.6 27.8 324 26-442 19-355 (366)
85 PRK13355 bifunctional HTH-doma 100.0 2.9E-27 6.2E-32 241.4 25.2 346 36-442 144-514 (517)
86 PRK09148 aminotransferase; Val 100.0 7E-27 1.5E-31 231.9 27.1 350 29-442 21-390 (405)
87 PRK07309 aromatic amino acid a 100.0 2.2E-26 4.7E-31 227.5 30.2 340 38-442 30-388 (391)
88 PLN02880 tyrosine decarboxylas 100.0 3.1E-26 6.6E-31 229.9 31.5 339 75-442 117-484 (490)
89 PRK08068 transaminase; Reviewe 100.0 1.3E-26 2.8E-31 229.2 28.3 335 36-438 30-385 (389)
90 PRK07337 aminotransferase; Val 100.0 3.3E-26 7.2E-31 226.3 31.1 342 36-440 28-387 (388)
91 TIGR01821 5aminolev_synth 5-am 100.0 1E-25 2.2E-30 223.8 34.4 341 38-442 45-396 (402)
92 PLN02590 probable tyrosine dec 100.0 5.4E-26 1.2E-30 228.0 32.2 339 75-442 165-532 (539)
93 TIGR03537 DapC succinyldiamino 100.0 1.6E-26 3.5E-31 225.2 27.8 327 40-438 2-349 (350)
94 PRK04870 histidinol-phosphate 100.0 1.1E-26 2.4E-31 227.1 26.7 325 37-440 25-356 (356)
95 TIGR01264 tyr_amTase_E tyrosin 100.0 2.6E-26 5.6E-31 228.0 29.5 345 37-442 30-399 (401)
96 COG0079 HisC Histidinol-phosph 100.0 3.2E-26 7E-31 220.0 29.1 321 39-442 23-354 (356)
97 TIGR01437 selA_rel uncharacter 100.0 2.9E-26 6.2E-31 223.5 29.2 322 44-440 18-363 (363)
98 PLN02452 phosphoserine transam 100.0 1.2E-26 2.5E-31 224.1 26.0 344 40-442 8-363 (365)
99 TIGR01265 tyr_nico_aTase tyros 100.0 2.8E-26 6.1E-31 227.7 29.5 347 37-442 30-401 (403)
100 PRK05387 histidinol-phosphate 100.0 1.6E-26 3.4E-31 225.9 27.0 321 38-441 24-352 (353)
101 PLN02187 rooty/superroot1 100.0 5.1E-26 1.1E-30 228.3 31.3 346 37-446 65-442 (462)
102 PRK06348 aspartate aminotransf 100.0 2.9E-26 6.4E-31 226.2 29.0 334 38-439 29-382 (384)
103 TIGR03799 NOD_PanD_pyr putativ 100.0 6.9E-26 1.5E-30 227.7 31.3 348 61-435 109-518 (522)
104 PRK08912 hypothetical protein; 100.0 4.2E-26 9.2E-31 225.4 29.3 340 38-442 26-386 (387)
105 PLN02483 serine palmitoyltrans 100.0 2.2E-25 4.7E-30 224.7 34.7 346 37-442 99-466 (489)
106 PLN00143 tyrosine/nicotianamin 100.0 6.4E-26 1.4E-30 225.2 30.3 369 14-442 5-404 (409)
107 PRK07683 aminotransferase A; V 100.0 7.1E-26 1.5E-30 223.6 30.4 338 37-443 27-384 (387)
108 PRK09064 5-aminolevulinate syn 100.0 2.3E-25 5E-30 221.7 34.0 342 37-442 45-397 (407)
109 PRK06290 aspartate aminotransf 100.0 6.7E-26 1.4E-30 224.5 29.9 339 37-442 43-405 (410)
110 PRK07392 threonine-phosphate d 100.0 1.3E-25 2.8E-30 219.7 31.4 345 17-442 1-359 (360)
111 PRK08153 histidinol-phosphate 100.0 7.2E-26 1.6E-30 222.0 29.5 326 39-444 33-367 (369)
112 PRK07568 aspartate aminotransf 100.0 4.2E-26 9.2E-31 226.4 28.2 338 37-443 29-393 (397)
113 TIGR01825 gly_Cac_T_rel pyrido 100.0 1.8E-25 3.9E-30 221.1 32.4 339 36-442 31-381 (385)
114 PRK09147 succinyldiaminopimela 100.0 1.1E-25 2.3E-30 223.2 30.4 347 26-440 13-394 (396)
115 PRK05937 8-amino-7-oxononanoat 100.0 1.8E-25 4E-30 219.2 31.6 288 77-442 53-350 (370)
116 PLN02656 tyrosine transaminase 100.0 4.5E-26 9.7E-31 226.4 27.4 343 36-444 29-405 (409)
117 PRK08363 alanine aminotransfer 100.0 4.8E-26 1E-30 225.8 27.6 342 36-442 28-394 (398)
118 cd00378 SHMT Serine-glycine hy 100.0 1.1E-26 2.4E-31 231.0 23.1 351 38-444 19-387 (402)
119 PRK08175 aminotransferase; Val 100.0 8.8E-26 1.9E-30 223.6 29.4 343 36-442 27-389 (395)
120 PRK07908 hypothetical protein; 100.0 6E-26 1.3E-30 221.2 27.7 319 37-443 21-348 (349)
121 PRK15481 transcriptional regul 100.0 7.7E-26 1.7E-30 226.5 28.3 327 40-441 87-430 (431)
122 PRK13393 5-aminolevulinate syn 100.0 4.7E-25 1E-29 219.1 33.7 341 38-442 45-396 (406)
123 PLN02721 threonine aldolase 99.9 5.2E-26 1.1E-30 222.3 26.2 333 39-441 6-351 (353)
124 PRK07550 hypothetical protein; 99.9 9.7E-26 2.1E-30 222.8 28.1 337 37-439 28-384 (386)
125 PLN02376 1-aminocyclopropane-1 99.9 8.2E-26 1.8E-30 227.9 27.7 351 39-441 47-437 (496)
126 PRK09265 aminotransferase AlaT 99.9 4.6E-25 1E-29 219.1 31.8 343 36-442 31-401 (404)
127 COG1168 MalY Bifunctional PLP- 99.9 2.4E-25 5.3E-30 205.1 27.4 343 38-442 25-386 (388)
128 COG0156 BioF 7-keto-8-aminopel 99.9 5.3E-25 1.1E-29 210.9 30.8 338 37-439 38-387 (388)
129 PRK12414 putative aminotransfe 99.9 3.9E-25 8.5E-30 218.1 31.0 337 37-438 28-383 (384)
130 PLN02263 serine decarboxylase 99.9 5.1E-25 1.1E-29 215.4 30.7 298 77-442 130-443 (470)
131 PRK14809 histidinol-phosphate 99.9 6.5E-25 1.4E-29 214.6 31.6 330 25-441 17-356 (357)
132 PRK06358 threonine-phosphate d 99.9 6.6E-25 1.4E-29 214.0 31.5 333 26-440 7-353 (354)
133 PRK08636 aspartate aminotransf 99.9 2E-25 4.3E-30 221.6 28.3 348 33-442 28-400 (403)
134 PRK09082 methionine aminotrans 99.9 2.9E-25 6.4E-30 219.2 29.1 338 37-438 29-385 (386)
135 TIGR03542 DAPAT_plant LL-diami 99.9 2.5E-25 5.5E-30 220.8 28.1 340 37-439 32-401 (402)
136 PRK07777 aminotransferase; Val 99.9 5.4E-25 1.2E-29 217.5 30.3 342 38-442 24-386 (387)
137 TIGR03538 DapC_gpp succinyldia 99.9 3.1E-25 6.6E-30 219.7 28.4 336 36-439 26-392 (393)
138 PLN02450 1-aminocyclopropane-1 99.9 2.3E-25 4.9E-30 223.9 27.8 358 38-443 38-431 (468)
139 PLN02607 1-aminocyclopropane-1 99.9 2E-25 4.3E-30 222.7 27.1 355 38-444 47-439 (447)
140 PRK06107 aspartate aminotransf 99.9 8.2E-25 1.8E-29 217.1 31.1 346 35-442 30-400 (402)
141 KOG0257 Kynurenine aminotransf 99.9 9.1E-26 2E-30 210.0 22.4 368 20-437 14-414 (420)
142 PRK05166 histidinol-phosphate 99.9 7.2E-25 1.6E-29 215.3 30.0 331 25-441 25-370 (371)
143 PRK01688 histidinol-phosphate 99.9 8.2E-26 1.8E-30 220.1 23.0 282 82-437 59-351 (351)
144 PRK04635 histidinol-phosphate 99.9 1.8E-25 3.8E-30 218.2 24.7 279 82-439 62-352 (354)
145 cd00609 AAT_like Aspartate ami 99.9 1.9E-25 4.1E-30 217.8 24.6 299 76-438 32-350 (350)
146 PLN02414 glycine dehydrogenase 99.9 2E-24 4.3E-29 228.3 33.7 352 22-438 83-465 (993)
147 PRK06855 aminotransferase; Val 99.9 8.5E-25 1.8E-29 218.5 28.6 351 36-442 30-429 (433)
148 PRK08064 cystathionine beta-ly 99.9 2.2E-25 4.9E-30 219.0 23.7 312 73-439 47-383 (390)
149 PRK07590 L,L-diaminopimelate a 99.9 4.3E-25 9.4E-30 219.6 26.1 342 37-439 33-408 (409)
150 PF00155 Aminotran_1_2: Aminot 99.9 4.6E-25 9.9E-30 216.5 25.7 338 39-436 2-363 (363)
151 PRK05839 hypothetical protein; 99.9 2.7E-24 5.9E-29 211.2 30.4 341 24-441 6-373 (374)
152 cd00616 AHBA_syn 3-amino-5-hyd 99.9 1.6E-24 3.4E-29 211.8 28.4 317 79-437 17-352 (352)
153 PRK00011 glyA serine hydroxyme 99.9 5.7E-25 1.2E-29 219.5 25.3 348 38-442 25-389 (416)
154 PRK13580 serine hydroxymethylt 99.9 1.2E-24 2.7E-29 213.2 26.9 362 27-442 39-445 (493)
155 PRK03321 putative aminotransfe 99.9 7.1E-25 1.5E-29 214.0 25.2 315 39-441 23-350 (352)
156 COG0076 GadB Glutamate decarbo 99.9 1.2E-24 2.5E-29 214.9 26.4 323 38-390 61-402 (460)
157 PRK03317 histidinol-phosphate 99.9 1.1E-24 2.4E-29 213.9 26.0 321 39-442 27-364 (368)
158 PRK13238 tnaA tryptophanase/L- 99.9 2.5E-24 5.5E-29 214.7 28.9 385 12-442 10-433 (460)
159 PRK02610 histidinol-phosphate 99.9 3.1E-24 6.7E-29 210.9 29.1 325 39-441 29-370 (374)
160 PRK12462 phosphoserine aminotr 99.9 2.4E-24 5.3E-29 205.5 26.9 345 40-442 5-362 (364)
161 PLN02955 8-amino-7-oxononanoat 99.9 1.1E-23 2.5E-28 206.3 31.7 341 38-442 102-461 (476)
162 TIGR01140 L_thr_O3P_dcar L-thr 99.9 3.1E-24 6.7E-29 207.3 27.3 319 24-437 3-330 (330)
163 PRK06836 aspartate aminotransf 99.9 6.6E-24 1.4E-28 210.1 29.9 333 38-442 33-391 (394)
164 PRK04781 histidinol-phosphate 99.9 4.7E-24 1E-28 208.6 28.5 291 82-441 61-362 (364)
165 TIGR01365 serC_2 phosphoserine 99.9 1.9E-24 4.1E-29 208.7 24.6 345 42-441 6-372 (374)
166 PRK08133 O-succinylhomoserine 99.9 3.2E-24 7E-29 210.8 25.6 310 74-441 55-389 (390)
167 PLN02271 serine hydroxymethylt 99.9 6.8E-24 1.5E-28 208.4 27.5 359 38-441 148-539 (586)
168 cd06502 TA_like Low-specificit 99.9 1.2E-24 2.6E-29 211.3 22.0 316 51-438 10-337 (338)
169 PLN02231 alanine transaminase 99.9 7.4E-24 1.6E-28 214.9 28.4 369 26-442 116-527 (534)
170 PRK06425 histidinol-phosphate 99.9 3.5E-24 7.7E-29 207.1 24.8 280 81-440 41-331 (332)
171 PRK08861 cystathionine gamma-s 99.9 4.1E-24 8.9E-29 208.6 25.1 312 74-441 47-382 (388)
172 PRK06767 methionine gamma-lyas 99.9 3.9E-24 8.4E-29 210.3 25.1 312 74-441 55-384 (386)
173 COG1167 ARO8 Transcriptional r 99.9 9E-24 2E-28 211.3 28.1 343 38-442 89-455 (459)
174 PRK08114 cystathionine beta-ly 99.9 5.7E-24 1.2E-28 206.6 25.1 314 73-441 55-392 (395)
175 TIGR01329 cysta_beta_ly_E cyst 99.9 7.4E-24 1.6E-28 207.4 25.7 310 74-442 41-375 (378)
176 PRK05367 glycine dehydrogenase 99.9 3.9E-23 8.5E-28 219.7 33.1 350 23-437 57-437 (954)
177 PLN03226 serine hydroxymethylt 99.9 2.6E-23 5.6E-28 207.8 29.4 362 38-442 34-419 (475)
178 PRK13034 serine hydroxymethylt 99.9 7.1E-24 1.5E-28 210.1 25.1 347 38-442 28-392 (416)
179 PRK08045 cystathionine gamma-s 99.9 1.1E-23 2.3E-28 206.4 25.9 312 74-442 46-382 (386)
180 PRK07504 O-succinylhomoserine 99.9 1.5E-23 3.3E-28 206.4 27.1 347 32-441 24-394 (398)
181 PLN03227 serine palmitoyltrans 99.9 7E-23 1.5E-27 201.6 31.7 343 52-443 14-383 (392)
182 TIGR02080 O_succ_thio_ly O-suc 99.9 1.2E-23 2.6E-28 205.9 25.8 311 74-441 45-380 (382)
183 TIGR03576 pyridox_MJ0158 pyrid 99.9 7.3E-23 1.6E-27 197.7 30.3 301 48-440 32-345 (346)
184 PRK05968 hypothetical protein; 99.9 1.5E-23 3.2E-28 206.1 25.9 310 74-437 57-385 (389)
185 PLN02672 methionine S-methyltr 99.9 6.5E-23 1.4E-27 217.3 32.1 343 36-441 695-1079(1082)
186 TIGR01325 O_suc_HS_sulf O-succ 99.9 1.6E-23 3.6E-28 205.4 25.8 307 75-439 49-379 (380)
187 PRK07865 N-succinyldiaminopime 99.9 3.7E-23 8.1E-28 202.7 28.3 316 36-437 25-363 (364)
188 PRK05367 glycine dehydrogenase 99.9 2E-22 4.3E-27 214.3 35.4 356 37-443 498-876 (954)
189 cd00614 CGS_like CGS_like: Cys 99.9 1.7E-23 3.6E-28 204.9 25.2 310 74-440 34-368 (369)
190 TIGR03539 DapC_actino succinyl 99.9 3.7E-23 8.1E-28 202.1 27.5 315 36-436 19-356 (357)
191 PRK14808 histidinol-phosphate 99.9 4.8E-23 1E-27 199.1 27.7 309 36-439 17-334 (335)
192 PRK07811 cystathionine gamma-s 99.9 2.9E-23 6.3E-28 203.9 26.3 311 74-441 55-387 (388)
193 TIGR01324 cysta_beta_ly_B cyst 99.9 3E-23 6.6E-28 202.3 26.2 310 74-441 44-375 (377)
194 KOG0259 Tyrosine aminotransfer 99.9 1.4E-22 3.1E-27 185.5 28.6 348 38-444 61-435 (447)
195 PRK09028 cystathionine beta-ly 99.9 3.1E-23 6.8E-28 202.1 26.0 312 74-441 55-386 (394)
196 PLN02509 cystathionine beta-ly 99.9 4.1E-23 8.9E-28 204.7 26.1 312 74-443 127-462 (464)
197 PRK08776 cystathionine gamma-s 99.9 5.3E-23 1.1E-27 202.5 26.7 310 74-440 54-388 (405)
198 PRK08134 O-acetylhomoserine am 99.9 1.1E-22 2.4E-27 201.3 29.1 329 74-442 58-427 (433)
199 KOG1360 5-aminolevulinate synt 99.9 9.7E-23 2.1E-27 187.1 26.2 357 24-442 150-524 (570)
200 PRK03967 histidinol-phosphate 99.9 8.1E-23 1.8E-27 197.9 27.2 311 37-442 17-334 (337)
201 PRK08249 cystathionine gamma-s 99.9 3.7E-23 8E-28 203.4 25.1 312 74-442 58-393 (398)
202 PRK06460 hypothetical protein; 99.9 4.4E-23 9.5E-28 201.8 25.4 311 74-441 39-373 (376)
203 PRK06959 putative threonine-ph 99.9 1.1E-22 2.4E-27 196.9 27.8 269 83-441 56-332 (339)
204 PRK12566 glycine dehydrogenase 99.9 1.3E-22 2.8E-27 210.5 29.9 320 76-442 539-876 (954)
205 TIGR01328 met_gam_lyase methio 99.9 5.5E-23 1.2E-27 202.0 25.0 313 74-441 53-389 (391)
206 PRK05664 threonine-phosphate d 99.9 1.4E-22 3E-27 195.7 27.3 270 83-443 52-329 (330)
207 cd00610 OAT_like Acetyl ornith 99.9 2.9E-22 6.3E-27 200.1 30.4 351 36-440 34-413 (413)
208 PRK03244 argD acetylornithine 99.9 3.8E-22 8.3E-27 198.0 30.4 329 36-442 41-394 (398)
209 PRK08354 putative aminotransfe 99.9 1.6E-21 3.4E-26 186.8 32.7 298 38-440 8-310 (311)
210 PRK08574 cystathionine gamma-s 99.9 6.7E-23 1.5E-27 200.8 23.6 309 74-441 47-383 (385)
211 PLN02242 methionine gamma-lyas 99.9 1.7E-22 3.7E-27 199.6 26.2 312 74-441 70-414 (418)
212 PRK06234 methionine gamma-lyas 99.9 2.6E-22 5.6E-27 198.0 27.2 313 74-441 58-396 (400)
213 PRK07582 cystathionine gamma-l 99.9 1.7E-22 3.7E-27 197.1 25.6 298 74-438 45-365 (366)
214 PRK08248 O-acetylhomoserine am 99.9 2.2E-22 4.8E-27 199.3 26.3 325 74-442 58-427 (431)
215 TIGR00461 gcvP glycine dehydro 99.9 9.2E-22 2E-26 205.6 31.8 328 76-443 526-868 (939)
216 TIGR03588 PseC UDP-4-keto-6-de 99.9 8.2E-22 1.8E-26 194.3 29.8 323 80-440 29-380 (380)
217 cd00615 Orn_deC_like Ornithine 99.9 8.6E-24 1.9E-28 200.7 14.5 229 76-339 55-293 (294)
218 PRK09440 avtA valine--pyruvate 99.9 2.1E-22 4.6E-27 201.0 25.2 352 38-442 30-411 (416)
219 PLN02368 alanine transaminase 99.9 6E-23 1.3E-27 202.2 20.7 323 5-361 5-395 (407)
220 PRK07503 methionine gamma-lyas 99.9 3.8E-22 8.2E-27 196.9 25.6 313 74-441 59-395 (403)
221 PRK07810 O-succinylhomoserine 99.9 3.2E-22 7E-27 197.0 25.0 314 74-440 64-402 (403)
222 PRK06176 cystathionine gamma-s 99.9 3.7E-22 8.1E-27 195.2 24.9 309 74-441 44-377 (380)
223 PRK05994 O-acetylhomoserine am 99.9 1.1E-21 2.3E-26 194.8 28.3 324 74-441 57-425 (427)
224 PRK11658 UDP-4-amino-4-deoxy-L 99.9 2E-21 4.3E-26 190.9 29.9 321 80-440 33-377 (379)
225 PRK08247 cystathionine gamma-s 99.9 4E-22 8.6E-27 194.8 24.5 307 74-441 46-363 (366)
226 PF00282 Pyridoxal_deC: Pyrido 99.9 1E-22 2.2E-27 197.9 20.2 273 75-361 74-372 (373)
227 PRK07671 cystathionine beta-ly 99.9 5.2E-22 1.1E-26 194.2 25.2 308 74-440 44-376 (377)
228 PRK07812 O-acetylhomoserine am 99.9 1.4E-21 3E-26 193.3 28.0 331 74-442 63-431 (436)
229 PRK07049 methionine gamma-lyas 99.9 7.1E-22 1.5E-26 195.9 25.5 318 74-442 77-426 (427)
230 PTZ00376 aspartate aminotransf 99.9 5.7E-22 1.2E-26 196.8 24.9 340 38-441 29-402 (404)
231 PRK09257 aromatic amino acid a 99.9 1.2E-21 2.6E-26 194.2 27.1 333 38-439 26-395 (396)
232 PRK00854 rocD ornithine--oxo-a 99.9 6.1E-21 1.3E-25 189.5 31.5 324 48-441 55-400 (401)
233 PRK09275 aspartate aminotransf 99.9 1E-21 2.2E-26 196.7 25.8 360 39-443 101-518 (527)
234 PRK07050 cystathionine beta-ly 99.9 1.7E-21 3.7E-26 191.5 26.8 313 74-441 59-390 (394)
235 COG2008 GLY1 Threonine aldolas 99.9 3.3E-22 7.2E-27 184.2 20.2 330 42-440 3-341 (342)
236 PRK05613 O-acetylhomoserine am 99.9 2.3E-21 4.9E-26 191.9 27.4 330 74-441 63-435 (437)
237 PRK05939 hypothetical protein; 99.9 5.8E-21 1.3E-25 187.6 29.8 325 74-441 41-395 (397)
238 PRK10534 L-threonine aldolase; 99.9 6E-22 1.3E-26 191.9 22.3 310 51-441 12-332 (333)
239 PRK07269 cystathionine gamma-s 99.9 8.9E-22 1.9E-26 191.3 23.5 305 74-441 48-363 (364)
240 PRK06084 O-acetylhomoserine am 99.9 1.6E-21 3.4E-26 193.1 25.6 328 74-442 52-422 (425)
241 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 5.1E-21 1.1E-25 189.9 28.5 168 74-269 51-220 (418)
242 PRK05967 cystathionine beta-ly 99.9 2.2E-21 4.8E-26 188.8 25.1 312 74-441 58-390 (395)
243 TIGR03801 asp_4_decarbox aspar 99.9 2.5E-21 5.5E-26 193.6 26.1 366 39-442 95-516 (521)
244 TIGR00474 selA seryl-tRNA(sec) 99.9 6.3E-21 1.4E-25 188.7 28.6 211 37-273 79-307 (454)
245 COG0399 WecE Predicted pyridox 99.9 9.1E-21 2E-25 180.3 27.8 341 53-442 15-373 (374)
246 PRK06702 O-acetylhomoserine am 99.9 4.1E-21 8.9E-26 188.8 26.3 323 79-443 60-425 (432)
247 PRK04311 selenocysteine syntha 99.9 2.3E-20 5E-25 185.2 31.1 211 37-273 84-312 (464)
248 PRK07505 hypothetical protein; 99.9 4.7E-20 1E-24 183.1 32.4 341 36-443 44-400 (402)
249 COG0112 GlyA Glycine/serine hy 99.9 5.3E-21 1.1E-25 177.1 23.1 358 27-442 16-390 (413)
250 PRK04073 rocD ornithine--oxo-a 99.9 2.3E-20 5E-25 184.8 29.5 320 48-440 54-395 (396)
251 TIGR00707 argD acetylornithine 99.9 4.3E-20 9.3E-25 182.3 30.5 331 36-439 25-378 (379)
252 TIGR02379 ECA_wecE TDP-4-keto- 99.9 3E-20 6.5E-25 181.7 28.8 337 52-440 10-375 (376)
253 KOG3846 L-kynurenine hydrolase 99.9 1.6E-20 3.5E-25 167.1 23.7 371 26-443 39-462 (465)
254 cd00617 Tnase_like Tryptophana 99.9 2.4E-20 5.3E-25 183.5 27.2 329 76-444 49-410 (431)
255 PRK08637 hypothetical protein; 99.9 3.3E-20 7.2E-25 183.3 27.8 327 55-441 21-385 (388)
256 PLN02397 aspartate transaminas 99.9 4.9E-20 1.1E-24 183.5 28.6 340 37-442 47-421 (423)
257 COG1103 Archaea-specific pyrid 99.9 8.2E-20 1.8E-24 160.0 26.0 356 36-442 13-380 (382)
258 COG2873 MET17 O-acetylhomoseri 99.9 3.4E-20 7.3E-25 169.9 24.2 332 70-441 52-424 (426)
259 PTZ00125 ornithine aminotransf 99.9 1E-19 2.2E-24 180.8 29.8 339 37-442 30-395 (400)
260 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 4.2E-20 9.1E-25 181.4 26.5 316 80-440 31-374 (375)
261 KOG1359 Glycine C-acetyltransf 99.9 5.6E-20 1.2E-24 162.8 24.1 332 38-442 67-412 (417)
262 PF01053 Cys_Met_Meta_PP: Cys/ 99.9 2.8E-20 6.1E-25 180.5 24.5 310 72-441 47-386 (386)
263 COG4992 ArgD Ornithine/acetylo 99.9 7.5E-19 1.6E-23 165.4 31.3 325 48-443 56-399 (404)
264 PRK05964 adenosylmethionine--8 99.9 3.1E-19 6.6E-24 178.0 30.3 344 47-442 55-422 (423)
265 COG0160 GabT 4-aminobutyrate a 99.9 1.7E-18 3.7E-23 167.8 34.3 345 48-442 70-445 (447)
266 PF01041 DegT_DnrJ_EryC1: DegT 99.9 5E-20 1.1E-24 180.1 22.9 317 80-437 25-363 (363)
267 PRK02627 acetylornithine amino 99.9 8.1E-19 1.8E-23 174.2 31.6 339 36-442 37-394 (396)
268 PRK01278 argD acetylornithine 99.9 5.6E-19 1.2E-23 174.8 30.2 324 47-441 44-387 (389)
269 TIGR03811 tyr_de_CO2_Ent tyros 99.9 4.1E-19 8.9E-24 180.2 29.1 385 42-442 86-602 (608)
270 PF01276 OKR_DC_1: Orn/Lys/Arg 99.9 7E-21 1.5E-25 183.7 14.8 280 76-389 62-398 (417)
271 PRK02936 argD acetylornithine 99.9 9.8E-19 2.1E-23 172.4 30.4 328 36-440 27-377 (377)
272 PRK15407 lipopolysaccharide bi 99.9 9.9E-19 2.1E-23 173.9 30.4 327 81-441 64-435 (438)
273 TIGR03531 selenium_SpcS O-phos 99.9 3E-19 6.6E-24 175.3 26.3 316 78-439 103-443 (444)
274 PRK06434 cystathionine gamma-l 99.9 1.5E-19 3.2E-24 176.0 23.2 307 74-440 58-382 (384)
275 PRK15029 arginine decarboxylas 99.8 1.7E-19 3.7E-24 186.2 24.8 238 76-343 201-466 (755)
276 COG0626 MetC Cystathionine bet 99.8 4.5E-19 9.9E-24 169.8 25.9 312 74-441 57-393 (396)
277 KOG0256 1-aminocyclopropane-1- 99.8 2.7E-19 5.8E-24 165.6 22.1 316 79-443 120-462 (471)
278 TIGR03246 arg_catab_astC succi 99.8 3.1E-18 6.6E-23 169.5 31.5 339 36-442 33-395 (397)
279 PF00464 SHMT: Serine hydroxym 99.8 4.2E-20 9E-25 177.6 16.6 353 38-436 20-399 (399)
280 KOG1368 Threonine aldolase [Am 99.8 7E-20 1.5E-24 162.6 16.6 333 39-440 22-366 (384)
281 PLN02624 ornithine-delta-amino 99.8 4.3E-18 9.3E-23 171.3 31.3 333 48-443 89-445 (474)
282 TIGR01885 Orn_aminotrans ornit 99.8 5.8E-18 1.2E-22 168.1 31.4 339 36-440 35-400 (401)
283 cd01494 AAT_I Aspartate aminot 99.8 1.9E-19 4.1E-24 156.5 17.4 165 82-267 2-170 (170)
284 PRK11522 putrescine--2-oxoglut 99.8 8.2E-18 1.8E-22 168.0 30.8 339 47-442 95-451 (459)
285 PRK12381 bifunctional succinyl 99.8 9.6E-18 2.1E-22 166.4 30.5 324 47-442 52-399 (406)
286 PRK03715 argD acetylornithine 99.8 1.1E-17 2.5E-22 164.6 30.7 331 47-442 49-393 (395)
287 PRK05093 argD bifunctional N-s 99.8 2.1E-17 4.5E-22 164.1 32.4 338 36-441 38-399 (403)
288 TIGR03372 putres_am_tran putre 99.8 1.1E-17 2.5E-22 165.8 29.8 332 47-439 88-441 (442)
289 KOG1383 Glutamate decarboxylas 99.8 6.6E-18 1.4E-22 159.2 26.1 318 76-442 116-446 (491)
290 COG3977 Alanine-alpha-ketoisov 99.8 5.7E-18 1.2E-22 150.6 24.2 353 37-443 29-412 (417)
291 COG1932 SerC Phosphoserine ami 99.8 2.3E-18 5.1E-23 158.6 22.1 346 39-442 5-363 (365)
292 PRK04260 acetylornithine amino 99.8 1.2E-17 2.7E-22 164.3 29.0 328 36-439 27-374 (375)
293 TIGR02407 ectoine_ectB diamino 99.8 5.2E-17 1.1E-21 161.0 33.3 340 47-442 48-412 (412)
294 PRK08360 4-aminobutyrate amino 99.8 5.3E-17 1.2E-21 161.9 33.0 343 47-442 54-426 (443)
295 COG1003 GcvP Glycine cleavage 99.8 3.8E-17 8.2E-22 152.8 26.8 329 76-444 105-449 (496)
296 PRK05769 4-aminobutyrate amino 99.8 2.3E-16 5E-21 157.4 34.1 343 47-442 67-439 (441)
297 KOG0053 Cystathionine beta-lya 99.8 8.1E-18 1.8E-22 159.0 21.5 167 74-267 71-239 (409)
298 PRK09264 diaminobutyrate--2-ox 99.8 3.2E-16 6.9E-21 156.1 34.2 340 47-442 52-416 (425)
299 PRK08593 4-aminobutyrate amino 99.8 1.7E-16 3.7E-21 158.5 32.0 344 47-442 55-429 (445)
300 PLN02760 4-aminobutyrate:pyruv 99.8 1.3E-16 2.7E-21 161.0 31.1 356 46-442 101-491 (504)
301 PRK09221 beta alanine--pyruvat 99.8 8.4E-17 1.8E-21 160.6 29.6 352 47-442 62-443 (445)
302 PRK13360 omega amino acid--pyr 99.8 1E-16 2.2E-21 159.8 30.0 352 47-442 59-440 (442)
303 PRK08117 4-aminobutyrate amino 99.8 1.2E-16 2.5E-21 160.0 30.5 345 47-442 56-429 (433)
304 PRK05639 4-aminobutyrate amino 99.8 1.9E-16 4E-21 158.4 31.8 345 47-442 66-443 (457)
305 PLN00144 acetylornithine trans 99.8 1.6E-16 3.5E-21 156.0 30.8 326 47-442 28-380 (382)
306 PRK06058 4-aminobutyrate amino 99.8 1.9E-16 4.2E-21 158.4 31.4 342 47-442 69-442 (443)
307 PRK09792 4-aminobutyrate trans 99.8 2.8E-16 6.2E-21 156.2 31.8 342 48-441 54-420 (421)
308 PRK15399 lysine decarboxylase 99.8 6.2E-17 1.3E-21 165.5 27.4 310 77-441 192-558 (713)
309 TIGR00461 gcvP glycine dehydro 99.8 2.3E-16 5E-21 165.5 31.7 355 22-437 44-426 (939)
310 KOG2467 Glycine/serine hydroxy 99.8 3.3E-17 7.1E-22 149.5 22.1 364 27-442 30-426 (477)
311 PRK13578 ornithine decarboxyla 99.8 2E-17 4.4E-22 169.2 23.2 318 76-441 170-564 (720)
312 TIGR00700 GABAtrnsam 4-aminobu 99.8 4E-16 8.6E-21 155.4 31.9 345 47-441 46-419 (420)
313 PRK07678 aminotransferase; Val 99.8 2.2E-16 4.7E-21 158.0 29.9 357 47-442 60-449 (451)
314 PRK07986 adenosylmethionine--8 99.8 1.3E-16 2.7E-21 158.2 27.9 344 47-442 56-423 (428)
315 PRK06541 hypothetical protein; 99.8 1.7E-16 3.8E-21 158.8 28.8 353 47-442 65-455 (460)
316 PRK06173 adenosylmethionine--8 99.8 1.7E-16 3.7E-21 157.5 28.4 344 47-442 57-425 (429)
317 TIGR00713 hemL glutamate-1-sem 99.8 1.2E-16 2.7E-21 159.7 26.9 329 48-441 62-421 (423)
318 COG0161 BioA Adenosylmethionin 99.8 7.1E-17 1.5E-21 155.6 23.1 350 49-443 59-444 (449)
319 PRK06062 hypothetical protein; 99.8 6.8E-16 1.5E-20 154.4 30.5 341 48-442 67-445 (451)
320 PRK05630 adenosylmethionine--8 99.8 3.9E-16 8.4E-21 154.8 28.4 342 47-442 53-420 (422)
321 PRK06943 adenosylmethionine--8 99.8 6.4E-16 1.4E-20 154.5 29.6 350 47-442 67-446 (453)
322 PRK07495 4-aminobutyrate amino 99.8 1.8E-15 3.9E-20 150.3 32.2 344 47-442 53-421 (425)
323 PRK08088 4-aminobutyrate amino 99.8 6.7E-16 1.4E-20 154.1 29.3 345 48-442 55-423 (425)
324 PRK05965 hypothetical protein; 99.8 1E-15 2.3E-20 153.4 29.9 354 48-442 60-447 (459)
325 PRK15400 lysine decarboxylase 99.8 9.8E-17 2.1E-21 164.1 22.2 310 76-441 191-558 (714)
326 PRK04612 argD acetylornithine 99.8 7.5E-16 1.6E-20 152.2 27.9 330 47-442 53-403 (408)
327 PRK06105 aminotransferase; Pro 99.8 1.3E-15 2.8E-20 152.7 29.9 354 47-442 61-449 (460)
328 KOG1357 Serine palmitoyltransf 99.8 3.1E-17 6.7E-22 153.7 16.7 333 49-441 154-501 (519)
329 PRK06777 4-aminobutyrate amino 99.8 3.7E-15 8.1E-20 148.2 32.5 345 47-441 53-420 (421)
330 TIGR02618 tyr_phenol_ly tyrosi 99.8 1.1E-15 2.4E-20 148.2 27.8 326 79-444 70-428 (450)
331 PRK06149 hypothetical protein; 99.7 1.3E-15 2.8E-20 165.6 31.1 345 48-443 597-971 (972)
332 PRK06082 4-aminobutyrate amino 99.7 3.4E-15 7.4E-20 149.5 31.1 338 48-442 85-451 (459)
333 TIGR00508 bioA adenosylmethion 99.7 2.2E-15 4.7E-20 149.9 29.5 352 37-442 44-426 (427)
334 TIGR00709 dat 2,4-diaminobutyr 99.7 7.1E-15 1.5E-19 147.0 32.9 346 47-442 52-435 (442)
335 PRK07481 hypothetical protein; 99.7 3.8E-15 8.2E-20 149.0 30.6 355 47-442 55-445 (449)
336 PRK13237 tyrosine phenol-lyase 99.7 3E-15 6.5E-20 145.6 28.8 326 79-444 77-435 (460)
337 KOG0633 Histidinol phosphate a 99.7 5.7E-17 1.2E-21 141.5 14.9 290 83-439 72-374 (375)
338 KOG0634 Aromatic amino acid am 99.7 1.2E-15 2.6E-20 142.7 24.3 329 74-447 94-471 (472)
339 PRK12403 putative aminotransfe 99.7 4.6E-15 9.9E-20 148.8 30.3 352 47-443 67-453 (460)
340 PRK06918 4-aminobutyrate amino 99.7 4.7E-15 1E-19 148.9 30.3 346 47-442 67-443 (451)
341 PRK07036 hypothetical protein; 99.7 3.9E-15 8.5E-20 149.4 29.6 354 47-442 64-452 (466)
342 COG0001 HemL Glutamate-1-semia 99.7 2.5E-15 5.5E-20 143.2 26.3 324 49-442 68-428 (432)
343 PRK06916 adenosylmethionine--8 99.7 4E-15 8.6E-20 149.2 29.3 351 48-442 70-455 (460)
344 PRK08742 adenosylmethionine--8 99.7 6.2E-15 1.3E-19 147.8 30.2 353 47-443 77-468 (472)
345 TIGR03251 LAT_fam L-lysine 6-t 99.7 5.1E-15 1.1E-19 147.6 29.3 339 47-438 51-430 (431)
346 PRK06917 hypothetical protein; 99.7 9.4E-15 2E-19 146.0 31.0 358 47-442 44-437 (447)
347 PRK00062 glutamate-1-semialdeh 99.7 2.3E-15 4.9E-20 150.2 26.6 343 36-442 48-424 (426)
348 PRK07030 adenosylmethionine--8 99.7 9.2E-15 2E-19 146.6 30.7 352 47-442 60-446 (466)
349 TIGR00699 GABAtrns_euk 4-amino 99.7 9.3E-15 2E-19 145.4 30.2 335 48-439 72-463 (464)
350 PRK06938 diaminobutyrate--2-ox 99.7 2.2E-14 4.8E-19 143.7 33.0 346 47-442 76-460 (464)
351 PRK06148 hypothetical protein; 99.7 4.2E-15 9.1E-20 161.7 30.0 345 47-442 635-1010(1013)
352 PRK07483 hypothetical protein; 99.7 9.9E-15 2.1E-19 145.7 30.3 358 47-442 43-437 (443)
353 PRK04013 argD acetylornithine/ 99.7 3.6E-15 7.9E-20 144.6 25.9 307 47-442 37-360 (364)
354 PRK07480 putative aminotransfe 99.7 1.2E-14 2.6E-19 145.5 29.7 351 47-442 63-448 (456)
355 PRK07482 hypothetical protein; 99.7 1.3E-14 2.7E-19 145.7 29.3 355 48-442 64-454 (461)
356 COG1982 LdcC Arginine/lysine/o 99.7 1.6E-15 3.4E-20 149.3 22.0 311 78-446 68-412 (557)
357 PRK12389 glutamate-1-semialdeh 99.7 2.6E-14 5.6E-19 142.5 29.7 330 47-442 66-427 (428)
358 PRK06931 diaminobutyrate--2-ox 99.7 6.6E-14 1.4E-18 140.3 32.0 345 48-442 72-454 (459)
359 PF02347 GDC-P: Glycine cleava 99.7 1.2E-14 2.6E-19 140.5 25.3 364 9-436 29-429 (429)
360 PRK08297 L-lysine aminotransfe 99.7 3.2E-14 7E-19 142.0 29.4 343 47-442 58-441 (443)
361 PRK07046 aminotransferase; Val 99.7 3.9E-14 8.5E-19 141.5 29.7 327 48-442 89-450 (453)
362 KOG0628 Aromatic-L-amino-acid/ 99.7 2.5E-14 5.4E-19 134.9 25.5 330 76-442 109-471 (511)
363 COG1448 TyrB Aspartate/tyrosin 99.7 1.6E-14 3.4E-19 134.1 22.9 344 27-439 14-395 (396)
364 PLN02482 glutamate-1-semialdeh 99.7 7.9E-14 1.7E-18 139.6 28.9 323 48-441 113-472 (474)
365 PRK00615 glutamate-1-semialdeh 99.7 8.4E-14 1.8E-18 138.2 27.7 331 48-443 67-429 (433)
366 KOG0629 Glutamate decarboxylas 99.7 1E-14 2.2E-19 136.0 19.0 337 77-440 138-507 (510)
367 KOG2790 Phosphoserine aminotra 99.6 1E-13 2.2E-18 122.7 22.4 349 38-442 6-368 (370)
368 KOG1402 Ornithine aminotransfe 99.6 4.1E-13 9E-18 121.4 25.3 328 49-441 74-426 (427)
369 PF01212 Beta_elim_lyase: Beta 99.6 2.3E-15 4.9E-20 140.9 9.9 195 53-273 9-214 (290)
370 PRK06209 glutamate-1-semialdeh 99.6 6.7E-13 1.4E-17 132.4 25.3 333 47-443 61-406 (431)
371 PLN02974 adenosylmethionine-8- 99.6 2E-12 4.2E-17 136.2 28.4 355 51-440 383-816 (817)
372 KOG1404 Alanine-glyoxylate ami 99.6 1.3E-12 2.9E-17 121.0 23.1 333 49-436 65-432 (442)
373 COG0403 GcvP Glycine cleavage 99.6 2.6E-12 5.7E-17 120.8 25.1 338 42-440 79-448 (450)
374 KOG1358 Serine palmitoyltransf 99.5 1.3E-12 2.9E-17 120.8 20.5 355 36-441 92-464 (467)
375 PF12897 Aminotran_MocR: Alani 99.5 1.8E-12 3.9E-17 120.7 19.9 315 77-446 66-419 (425)
376 KOG0258 Alanine aminotransfera 99.5 3.8E-12 8.2E-17 117.7 20.6 343 51-442 87-473 (475)
377 PF05889 SLA_LP_auto_ag: Solub 99.5 2.3E-12 5E-17 121.7 19.4 317 85-441 61-389 (389)
378 TIGR02617 tnaA_trp_ase tryptop 99.5 1.1E-11 2.4E-16 119.4 24.4 358 40-444 43-443 (467)
379 PRK12566 glycine dehydrogenase 99.5 2.6E-11 5.7E-16 127.1 26.6 349 22-437 59-439 (954)
380 KOG1401 Acetylornithine aminot 99.5 4.2E-11 9.2E-16 112.0 25.0 263 48-341 70-348 (433)
381 COG1921 SelA Selenocysteine sy 99.5 2.2E-12 4.8E-17 121.9 16.5 201 42-273 30-242 (395)
382 KOG2040 Glycine dehydrogenase 99.5 1.5E-11 3.3E-16 120.2 22.1 321 76-440 578-916 (1001)
383 PF00202 Aminotran_3: Aminotra 99.4 8.7E-12 1.9E-16 120.5 17.4 287 47-361 29-337 (339)
384 PF03841 SelA: L-seryl-tRNA se 99.4 2.3E-13 4.9E-18 127.5 4.5 199 46-273 13-232 (367)
385 KOG1403 Predicted alanine-glyo 99.3 2.2E-10 4.8E-15 102.6 18.7 360 32-441 39-436 (452)
386 PF06838 Met_gamma_lyase: Meth 99.2 1.9E-09 4.1E-14 100.2 19.2 170 79-273 53-244 (403)
387 COG3033 TnaA Tryptophanase [Am 99.1 1.4E-07 3E-12 87.1 24.5 364 43-449 52-451 (471)
388 PF04864 Alliinase_C: Allinase 98.8 4E-08 8.8E-13 90.9 11.5 273 98-439 66-362 (363)
389 KOG1412 Aspartate aminotransfe 98.8 1.4E-06 3.1E-11 79.0 20.1 293 81-442 75-405 (410)
390 KOG2040 Glycine dehydrogenase 98.8 1.7E-07 3.6E-12 92.5 14.1 292 82-437 165-478 (1001)
391 KOG1405 4-aminobutyrate aminot 98.7 1.7E-06 3.6E-11 79.9 19.6 307 79-442 122-483 (484)
392 KOG1411 Aspartate aminotransfe 98.7 2.3E-07 5.1E-12 85.2 12.7 332 38-441 52-424 (427)
393 COG4100 Cystathionine beta-lya 98.6 3.8E-06 8.3E-11 75.9 18.0 173 80-273 65-255 (416)
394 KOG3843 Predicted serine hydro 97.9 0.00051 1.1E-08 61.3 13.8 173 85-273 62-246 (432)
395 KOG2142 Molybdenum cofactor su 97.1 0.00064 1.4E-08 68.0 5.2 380 29-440 14-429 (728)
396 PLN02994 1-aminocyclopropane-1 97.1 0.0014 3.1E-08 55.3 6.6 53 82-142 94-153 (153)
397 KOG0630 Predicted pyridoxal-de 93.1 1.7 3.7E-05 42.9 12.0 131 132-268 233-375 (838)
398 KOG2142 Molybdenum cofactor su 83.4 1.2 2.6E-05 45.4 3.7 175 85-272 181-364 (728)
399 COG2102 Predicted ATPases of P 79.1 41 0.00088 30.1 11.2 101 100-225 3-116 (223)
400 COG0552 FtsY Signal recognitio 74.3 30 0.00066 33.0 9.7 96 127-231 164-270 (340)
401 COG2870 RfaE ADP-heptose synth 71.5 15 0.00032 35.9 6.9 63 155-227 113-177 (467)
402 COG1066 Sms Predicted ATP-depe 67.5 56 0.0012 32.2 10.0 128 128-268 119-272 (456)
403 KOG1577 Aldo/keto reductase fa 66.8 95 0.0021 29.3 11.1 151 50-221 25-202 (300)
404 PF02310 B12-binding: B12 bind 66.3 36 0.00078 26.9 7.6 91 145-250 18-111 (121)
405 PRK12723 flagellar biosynthesi 59.3 1.6E+02 0.0036 29.0 11.9 88 129-231 205-298 (388)
406 cd02067 B12-binding B12 bindin 57.8 86 0.0019 24.7 8.3 91 144-250 16-109 (119)
407 cd01017 AdcA Metal binding pro 55.5 1.1E+02 0.0024 28.6 9.8 80 129-227 170-250 (282)
408 TIGR02026 BchE magnesium-proto 53.3 66 0.0014 33.0 8.5 85 152-250 33-122 (497)
409 COG1184 GCD2 Translation initi 52.0 2.1E+02 0.0047 27.0 14.4 117 82-227 102-227 (301)
410 TIGR01501 MthylAspMutase methy 50.3 1.4E+02 0.0031 24.5 8.7 77 140-231 14-93 (134)
411 PRK02261 methylaspartate mutas 50.0 1.4E+02 0.0031 24.5 10.8 77 139-230 15-94 (137)
412 COG0108 RibB 3,4-dihydroxy-2-b 49.4 34 0.00074 30.0 4.8 37 188-226 154-190 (203)
413 PF13407 Peripla_BP_4: Peripla 49.0 1E+02 0.0022 27.9 8.4 74 141-228 14-88 (257)
414 PRK13397 3-deoxy-7-phosphohept 48.3 35 0.00075 31.3 4.9 29 206-235 170-198 (250)
415 CHL00200 trpA tryptophan synth 46.9 1.5E+02 0.0033 27.4 9.1 84 131-228 121-209 (263)
416 COG0656 ARA1 Aldo/keto reducta 44.1 2.1E+02 0.0045 26.9 9.4 144 55-225 30-187 (280)
417 cd01994 Alpha_ANH_like_IV This 43.8 2.2E+02 0.0049 24.9 11.4 100 101-221 3-115 (194)
418 cd02070 corrinoid_protein_B12- 43.6 2.3E+02 0.0049 24.9 11.5 151 79-250 32-191 (201)
419 TIGR03573 WbuX N-acetyl sugar 42.5 3.3E+02 0.007 26.4 11.4 152 38-231 13-170 (343)
420 TIGR03600 phage_DnaB phage rep 42.1 1.6E+02 0.0035 29.3 9.2 14 129-142 222-235 (421)
421 cd01455 vWA_F11C1-5a_type Von 41.8 75 0.0016 27.9 5.8 52 175-227 95-148 (191)
422 cd02065 B12-binding_like B12 b 41.2 1.7E+02 0.0038 22.9 9.5 81 139-234 11-93 (125)
423 TIGR03772 anch_rpt_subst ancho 41.1 2.3E+02 0.005 28.9 9.9 78 130-225 371-449 (479)
424 cd02072 Glm_B12_BD B12 binding 40.9 2E+02 0.0043 23.4 9.0 92 144-250 16-115 (128)
425 cd06305 PBP1_methylthioribose_ 40.4 2.2E+02 0.0049 25.7 9.4 76 139-228 13-88 (273)
426 cd01137 PsaA Metal binding pro 39.6 1.7E+02 0.0036 27.5 8.3 75 130-224 177-252 (287)
427 COG0159 TrpA Tryptophan syntha 39.0 2.9E+02 0.0063 25.6 9.3 78 131-221 124-206 (265)
428 PF15608 PELOTA_1: PELOTA RNA 38.4 1.9E+02 0.004 22.4 7.8 66 83-162 22-87 (100)
429 cd06282 PBP1_GntR_like_2 Ligan 38.3 2.4E+02 0.0052 25.3 9.2 76 137-228 11-87 (266)
430 COG1058 CinA Predicted nucleot 38.2 2E+02 0.0044 26.5 8.2 87 128-228 8-94 (255)
431 PRK06372 translation initiatio 38.0 3.3E+02 0.0071 25.1 14.3 98 99-226 87-190 (253)
432 PF05368 NmrA: NmrA-like famil 37.7 2.9E+02 0.0064 24.5 9.5 59 152-226 41-99 (233)
433 cd06319 PBP1_ABC_sugar_binding 36.6 2E+02 0.0043 26.1 8.5 78 137-228 11-88 (277)
434 cd06318 PBP1_ABC_sugar_binding 36.3 2.2E+02 0.0048 26.0 8.7 75 139-228 13-88 (282)
435 PRK02308 uvsE putative UV dama 36.0 98 0.0021 29.4 6.1 31 200-232 186-216 (303)
436 cd06281 PBP1_LacI_like_5 Ligan 35.6 2.8E+02 0.006 25.1 9.2 76 137-228 11-87 (269)
437 cd01542 PBP1_TreR_like Ligand- 35.6 2.5E+02 0.0055 25.1 8.9 75 138-228 12-86 (259)
438 KOG1201 Hydroxysteroid 17-beta 35.1 1.6E+02 0.0034 27.8 7.1 55 99-163 39-93 (300)
439 PRK15408 autoinducer 2-binding 35.0 4.2E+02 0.009 25.5 10.5 76 139-228 37-113 (336)
440 PF06153 DUF970: Protein of un 34.9 90 0.0019 24.6 4.6 57 370-442 10-66 (109)
441 cd06300 PBP1_ABC_sugar_binding 33.8 2.3E+02 0.005 25.7 8.4 76 138-228 12-93 (272)
442 PF00532 Peripla_BP_1: Peripla 33.2 1.9E+02 0.004 26.9 7.6 80 133-229 6-88 (279)
443 cd06309 PBP1_YtfQ_like Peripla 32.7 2.5E+02 0.0053 25.5 8.3 77 137-228 11-88 (273)
444 PRK09354 recA recombinase A; P 32.1 3E+02 0.0066 26.7 8.8 65 128-202 86-150 (349)
445 cd06294 PBP1_ycjW_transcriptio 31.9 3.3E+02 0.0072 24.4 9.1 76 137-228 16-91 (270)
446 PRK14974 cell division protein 31.7 4.8E+02 0.01 25.2 14.6 93 128-230 166-264 (336)
447 TIGR02634 xylF D-xylose ABC tr 31.6 2.5E+02 0.0055 26.2 8.3 77 137-228 10-87 (302)
448 cd06292 PBP1_LacI_like_10 Liga 31.5 3.5E+02 0.0075 24.4 9.2 80 137-228 11-91 (273)
449 TIGR00064 ftsY signal recognit 31.5 4.3E+02 0.0094 24.6 15.0 93 128-229 98-201 (272)
450 PRK11633 cell division protein 31.1 1.6E+02 0.0035 26.6 6.3 56 369-440 159-214 (226)
451 cd02069 methionine_synthase_B1 30.9 3.9E+02 0.0084 23.8 11.0 106 131-251 89-202 (213)
452 cd06278 PBP1_LacI_like_2 Ligan 30.8 3.6E+02 0.0077 24.2 9.1 75 137-228 11-85 (266)
453 TIGR00262 trpA tryptophan synt 30.6 4.2E+02 0.0092 24.4 9.3 84 131-228 117-205 (256)
454 PRK10416 signal recognition pa 30.6 4.9E+02 0.011 24.9 13.5 94 128-230 140-244 (318)
455 PF02603 Hpr_kinase_N: HPr Ser 30.3 67 0.0015 26.0 3.5 42 174-227 71-112 (127)
456 PF03652 UPF0081: Uncharacteri 30.3 1.5E+02 0.0032 24.3 5.6 53 174-231 40-98 (135)
457 PF02571 CbiJ: Precorrin-6x re 30.1 50 0.0011 30.4 3.0 28 204-232 50-77 (249)
458 cd06299 PBP1_LacI_like_13 Liga 30.1 3.9E+02 0.0084 24.0 9.2 76 137-228 11-86 (265)
459 PTZ00081 enolase; Provisional 30.0 4E+02 0.0087 26.8 9.6 87 128-227 295-382 (439)
460 smart00642 Aamy Alpha-amylase 29.8 50 0.0011 28.2 2.8 30 199-229 62-91 (166)
461 PRK05447 1-deoxy-D-xylulose 5- 29.5 3.8E+02 0.0083 26.4 9.0 66 87-161 81-147 (385)
462 TIGR00160 MGSA methylglyoxal s 29.5 2.4E+02 0.0052 23.4 6.4 50 175-229 63-112 (143)
463 TIGR01470 cysG_Nterm siroheme 29.4 4E+02 0.0087 23.5 9.9 93 99-229 10-103 (205)
464 cd01018 ZntC Metal binding pro 29.2 3.6E+02 0.0078 24.8 8.7 78 129-227 169-247 (266)
465 PF00926 DHBP_synthase: 3,4-di 29.1 1.2E+02 0.0025 26.7 5.0 36 188-225 150-185 (194)
466 KOG1177 Long chain fatty acid 29.1 6.4E+02 0.014 25.8 10.3 88 76-173 78-167 (596)
467 cd06324 PBP1_ABC_sugar_binding 29.0 3.3E+02 0.0071 25.4 8.6 74 140-228 15-90 (305)
468 cd06322 PBP1_ABC_sugar_binding 28.9 3.1E+02 0.0067 24.7 8.3 77 138-228 12-88 (267)
469 TIGR00250 RNAse_H_YqgF RNAse H 28.7 1.9E+02 0.0041 23.5 5.9 53 174-231 37-94 (130)
470 cd00984 DnaB_C DnaB helicase C 28.5 2.4E+02 0.0052 25.3 7.3 32 190-221 123-164 (242)
471 COG1954 GlpP Glycerol-3-phosph 28.2 1.1E+02 0.0025 26.1 4.5 50 174-235 13-64 (181)
472 PRK08506 replicative DNA helic 28.1 1.5E+02 0.0034 30.1 6.4 8 221-228 303-310 (472)
473 cd06296 PBP1_CatR_like Ligand- 28.0 4.3E+02 0.0094 23.7 9.2 74 138-228 12-86 (270)
474 PLN02672 methionine S-methyltr 28.0 3.4E+02 0.0073 30.9 9.3 133 74-229 420-565 (1082)
475 TIGR02012 tigrfam_recA protein 27.8 3.1E+02 0.0068 26.3 8.0 16 374-390 268-283 (321)
476 COG1648 CysG Siroheme synthase 27.7 4.4E+02 0.0096 23.5 9.5 35 98-141 12-46 (210)
477 cd06297 PBP1_LacI_like_12 Liga 27.4 4.1E+02 0.0089 24.0 8.9 74 139-228 13-86 (269)
478 cd01019 ZnuA Zinc binding prot 27.3 4.3E+02 0.0093 24.7 8.9 79 130-227 179-258 (286)
479 PF00128 Alpha-amylase: Alpha 27.2 62 0.0013 30.2 3.3 34 196-230 41-74 (316)
480 cd01540 PBP1_arabinose_binding 27.2 3.6E+02 0.0078 24.6 8.5 76 138-228 12-87 (289)
481 PF13941 MutL: MutL protein 27.1 2.2E+02 0.0047 28.8 7.1 86 82-200 45-134 (457)
482 TIGR00486 YbgI_SA1388 dinuclea 26.9 4.9E+02 0.011 23.8 11.1 83 82-183 141-234 (249)
483 COG0296 GlgB 1,4-alpha-glucan 26.8 65 0.0014 33.8 3.5 39 192-231 199-237 (628)
484 PF10087 DUF2325: Uncharacteri 26.7 2.8E+02 0.0061 20.9 6.8 69 146-227 14-82 (97)
485 cd01539 PBP1_GGBP Periplasmic 26.7 4.5E+02 0.0097 24.5 9.1 75 139-228 13-90 (303)
486 PF03796 DnaB_C: DnaB-like hel 26.6 1.3E+02 0.0028 27.6 5.2 52 174-226 114-175 (259)
487 KOG1546 Metacaspase involved i 26.5 3E+02 0.0066 26.3 7.3 56 82-140 87-148 (362)
488 cd06312 PBP1_ABC_sugar_binding 26.4 3.9E+02 0.0084 24.2 8.5 78 138-228 13-90 (271)
489 cd01538 PBP1_ABC_xylose_bindin 26.4 5.1E+02 0.011 23.8 9.5 76 138-228 12-88 (288)
490 COG0616 SppA Periplasmic serin 26.3 2E+02 0.0043 27.6 6.5 76 188-271 95-174 (317)
491 cd06273 PBP1_GntR_like_1 This 26.2 4.8E+02 0.01 23.4 9.2 74 138-228 12-86 (268)
492 TIGR01361 DAHP_synth_Bsub phos 26.2 1.8E+02 0.0039 26.9 6.0 28 206-234 180-207 (260)
493 cd06313 PBP1_ABC_sugar_binding 26.2 3.7E+02 0.008 24.5 8.3 78 137-228 11-88 (272)
494 cd06298 PBP1_CcpA_like Ligand- 26.1 3.7E+02 0.0081 24.1 8.3 76 137-228 11-86 (268)
495 PRK08057 cobalt-precorrin-6x r 26.0 63 0.0014 29.7 2.9 28 204-232 49-76 (248)
496 cd00950 DHDPS Dihydrodipicolin 25.9 5.4E+02 0.012 23.9 12.7 36 191-228 127-162 (284)
497 COG0352 ThiE Thiamine monophos 25.8 1.4E+02 0.003 26.7 4.9 48 174-228 24-72 (211)
498 PF08423 Rad51: Rad51; InterP 25.7 5.3E+02 0.011 23.7 9.3 47 174-226 122-183 (256)
499 cd01575 PBP1_GntR Ligand-bindi 25.6 4.5E+02 0.0097 23.5 8.8 74 139-228 13-86 (268)
500 PRK12595 bifunctional 3-deoxy- 25.3 1.6E+02 0.0035 28.7 5.7 27 207-234 274-300 (360)
No 1
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.6e-53 Score=412.60 Aligned_cols=383 Identities=21% Similarity=0.324 Sum_probs=329.8
Q ss_pred CCCHHHHHhhhccCCC----CeEEeccCCCCCCcHHHHHHHHHHHHHHhcCCchh---hhhhhhHHHHHHHHHHHhHhCC
Q 012991 23 CISEAEIRDEFSHHQH----GVARINNGSFGSCPKSVLADQQKWQLKFLQQPDDF---YFNSLRKGILESRAAVKDLINA 95 (452)
Q Consensus 23 ~~~~~~ir~~~~~~~~----~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~la~~~~~ 95 (452)
.+++..+|+.||.+.+ +.+|||++..++.|..|++++.++...++.+.++. ......+.++++|+.+++++|+
T Consensus 2 ~~~~~~~r~~fp~l~~~~~~~~vylD~aa~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a 81 (405)
T COG0520 2 MFDVAAVRADFPALKREVGKPLVYLDNAATSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNA 81 (405)
T ss_pred CCChHHHHhhCHHHhhccCCCeEEecCcccccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCC
Confidence 4678889999998655 47999999999999999999999998887777642 3355677899999999999999
Q ss_pred CCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-H
Q 012991 96 DDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-I 174 (452)
Q Consensus 96 ~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~ 174 (452)
+..++|+||.|+|+++++++.++.+. +++||+||+++.+|+|+..+|..++++.|+++++++ .++++.+ .
T Consensus 82 ~~~~eIvft~~tT~aln~va~~l~~~-----~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~----~~~~g~~~~ 152 (405)
T COG0520 82 DSSDEIVFTRGTTEALNLVARGLGRS-----LKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIP----LDDDGLLDL 152 (405)
T ss_pred CCCCeEEEeCChhHHHHHHHHHhhhh-----hcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEe----cCCCCCcCH
Confidence 73489999999999999999988532 588999999999999999999999999999999995 4556666 8
Q ss_pred HHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCccc
Q 012991 175 NEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKW 254 (452)
Q Consensus 175 ~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~ 254 (452)
+++++.+ +++|++|.+++.+|.||.+.|+++|+++||++|+ +++||++|++|+.++|++.+++||+.+|+|||
T Consensus 153 ~~~~~~i------~~~Tklvais~vSn~tG~~~pv~~I~~la~~~ga-~v~VDaaq~~~h~~idv~~l~~Df~afsgHKw 225 (405)
T COG0520 153 DALEKLI------TPKTKLVALSHVSNVTGTVNPVKEIAELAHEHGA-LVLVDAAQAAGHLPIDVQELGCDFLAFSGHKW 225 (405)
T ss_pred HHHHHhc------CCCceEEEEECccccccccchHHHHHHHHHHcCC-EEEEECccccCccCCCchhcCCCEEEEccccc
Confidence 9999988 7999999999999999999999999999999999 79999999999999999999999999999999
Q ss_pred CcCCCCcEEEEEecCccccCCCCCceeccCCC-----------CcccccccccccCccccccHHHHHHHHHHhhcCHHHH
Q 012991 255 FFCPPSVAFLYCRKSILSSDMHHPVVSHEFGN-----------GLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGI 323 (452)
Q Consensus 255 l~g~~G~G~l~~~~~~~~~~l~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~ 323 (452)
++||.|+|++|+++++++. +.|........ ..+...++.||+++...+++.++++++.++ |.+++
T Consensus 226 l~gP~GiGvLy~r~~~l~~--l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~i--g~~~i 301 (405)
T COG0520 226 LLGPTGIGVLYVRKELLEE--LEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEI--GMEAI 301 (405)
T ss_pred ccCCCceEEEEEchHHHhh--cCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHH--hHHHH
Confidence 9999999999999999987 35543111100 112345678999999999999999999988 99999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCCcc-cccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCC
Q 012991 324 MQRNHEQALKMARMLANAWGTSLGSPPE-ICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQ 402 (452)
Q Consensus 324 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~ 402 (452)
.++.+++.+++.+.|.+++++++++++. .+.+++.|.++ +..+.++...|.++ ||.++.+++|..
T Consensus 302 ~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~-------~~~~~dv~~~L~~~-gI~vr~g~~ca~------ 367 (405)
T COG0520 302 EAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVK-------GIHPHDVATLLDEK-GIAVRAGHHCAQ------ 367 (405)
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeC-------CCCHHHHHHHHHhC-CeEEEecccccc------
Confidence 9999999999999999999999988775 56899999996 66889999999876 899998776532
Q ss_pred CCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 403 AGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 403 ~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
++.+. ......+|+|+++|||.+|||+|+++|+++.+
T Consensus 368 -p~~~~-~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 368 -PLHRL-LGVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred -HHHHh-cCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 22222 22344599999999999999999999999864
No 2
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=1.4e-45 Score=366.47 Aligned_cols=383 Identities=17% Similarity=0.266 Sum_probs=309.0
Q ss_pred CCCCHHHHHhhhccCCC-----CeEEeccCCCCCCcHHHHHHHHHHHHHHhcCCch---hhhhhhhHHHHHHHHHHHhHh
Q 012991 22 RCISEAEIRDEFSHHQH-----GVARINNGSFGSCPKSVLADQQKWQLKFLQQPDD---FYFNSLRKGILESRAAVKDLI 93 (452)
Q Consensus 22 ~~~~~~~ir~~~~~~~~-----~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~la~~~ 93 (452)
|+++++.+|++||.... +++|||+++.++.|++|++++.+++.....++.. .......+.++++|+.+++++
T Consensus 1 ~~~~~~~~r~~fp~~~~~~~~~~~iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~ 80 (406)
T PRK09295 1 MTFSVEKVRADFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFI 80 (406)
T ss_pred CCCChHHHHhhCccccCcCCCCceEEEeCcccccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHc
Confidence 35678899999998643 5899999999999999999999998765444422 223456778899999999999
Q ss_pred CCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH
Q 012991 94 NADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI 173 (452)
Q Consensus 94 ~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 173 (452)
|+.++++|+||+|+|+++++++.++... .+++||+|++++++|+++...|..+++..|++++.+++ +.++.+
T Consensus 81 ~~~~~~~v~~t~g~t~~l~~~~~~~~~~----~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~----~~~~~~ 152 (406)
T PRK09295 81 NARSAEELVFVRGTTEGINLVANSWGNS----NVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPL----NPDGTL 152 (406)
T ss_pred CcCCCCeEEEeCCHHHHHHHHHHHhhhh----cCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEec----CCCCCC
Confidence 9844689999999999999999876321 25789999999999999988998888889999999965 333444
Q ss_pred -HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCc
Q 012991 174 -INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLH 252 (452)
Q Consensus 174 -~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~ 252 (452)
+++|++++ ++++++|++++++|+||.+.|+++|.++|+++|+ ++++|++|+.|..++++..+++|++++|+|
T Consensus 153 d~~~l~~~i------~~~t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~-~vivD~a~~~g~~~~~~~~~~~D~~~~s~~ 225 (406)
T PRK09295 153 QLETLPALF------DERTRLLAITHVSNVLGTENPLAEMIALAHQHGA-KVLVDGAQAVMHHPVDVQALDCDFYVFSGH 225 (406)
T ss_pred CHHHHHHhc------CCCcEEEEEecchhcccccCCHHHHHHHHHHcCC-EEEEEcccccCccccCchhcCCCEEEeehh
Confidence 89999988 5789999999999999999999999999999999 799999999999999998889999999999
Q ss_pred ccCcCCCCcEEEEEecCccccCCCCCceeccC-------CCC----cccccccccccCccccccHHHHHHHHHHhhcCHH
Q 012991 253 KWFFCPPSVAFLYCRKSILSSDMHHPVVSHEF-------GNG----LPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGID 321 (452)
Q Consensus 253 K~l~g~~G~G~l~~~~~~~~~~l~~~~~~~~~-------~~~----~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~ 321 (452)
| ++||.|+|++++++++++. .++...... ... .....+..||+++..++++.++++++.+. |.+
T Consensus 226 K-~~gp~G~G~l~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~--g~~ 300 (406)
T PRK09295 226 K-LYGPTGIGILYVKEALLQE--MPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSAL--GLN 300 (406)
T ss_pred h-ccCCCCcEEEEEchHhHhh--CCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHh--CHH
Confidence 9 6899999999999988765 343321100 000 00124567999999999999999999976 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCC
Q 012991 322 GIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQP 401 (452)
Q Consensus 322 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~ 401 (452)
.+.++.+++++++++.|.+++++++..+.. +.+++.|.++ +.++.++.+.|.+ +||.++.+..+..
T Consensus 301 ~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~-~~~iv~~~~~-------~~~~~~~~~~L~~-~gI~v~~g~~c~~----- 366 (406)
T PRK09295 301 NIAEYEQNLMHYALSQLESVPDLTLYGPQN-RLGVIAFNLG-------KHHAYDVGSFLDN-YGIAVRTGHHCAM----- 366 (406)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEeCCCC-CceEEEEEEC-------CcCHHHHHHHHHh-CCeEEeccccchH-----
Confidence 999999999999999999888888877643 4678888876 3456678888865 6999976654421
Q ss_pred CCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 402 QAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 402 ~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
..... ...++++|+|++.|||.+||++++++|+++..
T Consensus 367 --~~~~~-~~~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 367 --PLMAY-YNVPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred --HHHHH-HCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 11000 12246899999999999999999999998753
No 3
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=2.8e-45 Score=364.02 Aligned_cols=382 Identities=18% Similarity=0.225 Sum_probs=309.4
Q ss_pred CCCHHHHHhhhccCCCCeEEeccCCCCCCcHHHHHHHHHHHHHHhcCCch---hhhhhhhHHHHHHHHHHHhHhCCCCCC
Q 012991 23 CISEAEIRDEFSHHQHGVARINNGSFGSCPKSVLADQQKWQLKFLQQPDD---FYFNSLRKGILESRAAVKDLINADDVG 99 (452)
Q Consensus 23 ~~~~~~ir~~~~~~~~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~la~~~~~~~~~ 99 (452)
+++++.+|++||....+.+|||+++.++.|+.|.+++.+++.....+++. .......+.++++|+.+++++|+++++
T Consensus 3 ~~~~~~~r~~fp~l~~~~~yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~ 82 (401)
T PRK10874 3 VFNPAQFRAQFPALQDAGVYLDSAATALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAK 82 (401)
T ss_pred CCCHHHHHHhCCCcCCceEEEeCCcccCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 35788999999977677999999999999999999999998776555433 123556778999999999999994478
Q ss_pred cEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHH
Q 012991 100 EISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFK 178 (452)
Q Consensus 100 ~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~ 178 (452)
+|++|+|+|+++++++.++.+. .+++||+|++++++|+++...|..+++..|++++.+++ +.++.+ +++++
T Consensus 83 ~i~~~~~~t~~i~~~~~~~~~~----~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~----~~~~~~d~~~l~ 154 (401)
T PRK10874 83 NIVWTRGTTESINLVAQSYARP----RLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPL----GADRLPDVDLLP 154 (401)
T ss_pred EEEEECCHHHHHHHHHHHhhhc----cCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEec----CCCCcCCHHHHH
Confidence 9999999999999999987321 24789999999999999988898878889999999965 333444 89999
Q ss_pred HHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCC
Q 012991 179 KGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCP 258 (452)
Q Consensus 179 ~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~ 258 (452)
+.+ .++|++|++++++|+||.+.|+++|.++|+++|+ ++++|++|+.|..++++..+++|++++|+|| ++||
T Consensus 155 ~~i------~~~t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~-~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K-~~gp 226 (401)
T PRK10874 155 ELI------TPRTRILALGQMSNVTGGCPDLARAITLAHQAGM-VVMVDGAQGAVHFPADVQALDIDFYAFSGHK-LYGP 226 (401)
T ss_pred Hhc------CcCcEEEEEeCCcccccCcCCHHHHHHHHHHcCC-EEEEECCcccccccCCchhcCCCEEEEeccc-ccCC
Confidence 998 5789999999999999999999999999999999 8999999999999988888899999999999 6899
Q ss_pred CCcEEEEEecCccccCCCCCceecc-------CC---CCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHH
Q 012991 259 PSVAFLYCRKSILSSDMHHPVVSHE-------FG---NGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNH 328 (452)
Q Consensus 259 ~G~G~l~~~~~~~~~~l~~~~~~~~-------~~---~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~ 328 (452)
.|+|+++++++.++. ..+..... +. .......+..|++++..++++.++++++.+. |.+.+.++..
T Consensus 227 ~G~G~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~--g~~~~~~~~~ 302 (401)
T PRK10874 227 TGIGVLYGKSELLEA--MSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADI--DINQAESWSR 302 (401)
T ss_pred CccEEEEEchHHHhc--CCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHh--CHHHHHHHHH
Confidence 999999999988875 33332100 00 0001123457899999999999999998876 8999999999
Q ss_pred HHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCC
Q 012991 329 EQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDK 408 (452)
Q Consensus 329 ~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~ 408 (452)
++++++.+.|.+++++++..++. .++++|.++ +.+..++.+.|.+ .||.++.+..+.. .+.+.
T Consensus 303 ~l~~~l~~~l~~~~g~~~~~~~~--~~i~~~~~~-------~~~~~~~~~~L~~-~gI~v~~g~~~~~-------~~~~~ 365 (401)
T PRK10874 303 SLATLAEDALAKLPGFRSFRCQD--SSLLAFDFA-------GVHHSDLVTLLAE-YGIALRAGQHCAQ-------PLLAA 365 (401)
T ss_pred HHHHHHHHHHhcCCCEEEeCCCC--CcEEEEEEC-------CcCHHHHHHHHHH-CCcEEeccccchH-------HHHHH
Confidence 99999999999888887765544 568888775 4456788888866 5999986654421 00000
Q ss_pred CCCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 409 DGIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 409 ~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
....+++|+|++.|||++||++++++|+++++.
T Consensus 366 -~g~~~~iRiS~~~~nt~edid~ll~al~~~~~~ 398 (401)
T PRK10874 366 -LGVTGTLRASFAPYNTQSDVDALVNAVDRALEL 398 (401)
T ss_pred -hCCCCEEEEEecccCCHHHHHHHHHHHHHHHHH
Confidence 012479999999999999999999999998764
No 4
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-45 Score=344.80 Aligned_cols=368 Identities=18% Similarity=0.279 Sum_probs=308.0
Q ss_pred eEEeccCCCCCCcHHHHHHHHHHHHHHhcCCchh--hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHH
Q 012991 40 VARINNGSFGSCPKSVLADQQKWQLKFLQQPDDF--YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQ 117 (452)
Q Consensus 40 ~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~ 117 (452)
++|||++.+.+..+.|+++|..++....+||++. ++....+.++++|+.+|+++|++ +++|+||+||||++++++.+
T Consensus 2 miYlD~~ATTp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~-~~eIiFTSG~TEsnNlaI~g 80 (386)
T COG1104 2 MIYLDNAATTPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGAD-PEEIIFTSGATESNNLAIKG 80 (386)
T ss_pred cccccccccCCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCC-CCeEEEecCCcHHHHHHHHh
Confidence 6899999999999999999999999988999885 45677889999999999999997 79999999999999999998
Q ss_pred hhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEE
Q 012991 118 IGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAII 196 (452)
Q Consensus 118 l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~ 196 (452)
....+.+ .+.+.+|+++..+|+++...++++ +..|++|.++ +++.++.+ +++|+++| .++|.+|.+
T Consensus 81 ~~~a~~~--~~~~~HIIts~iEH~aVl~~~~~L-e~~g~~Vtyl----~V~~~G~v~~e~L~~al------~~~T~LVSi 147 (386)
T COG1104 81 AALAYRN--AQKGKHIITSAIEHPAVLNTCRYL-ERQGFEVTYL----PVDSNGLVDLEQLEEAL------RPDTILVSI 147 (386)
T ss_pred hHHhhhc--ccCCCeEEEcccccHHHHHHHHHH-HhcCCeEEEe----CCCCCCeEcHHHHHHhc------CCCceEEEE
Confidence 6444321 146789999999999999999998 8889999999 66778888 99999999 588999999
Q ss_pred eccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCccccCCC
Q 012991 197 DHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMH 276 (452)
Q Consensus 197 ~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~ 276 (452)
.+.||.+|++.|+++|+++|+++++ ++|+|++|++|.+++|+..+++|++++|.|| ++||.|+|++|+++...-.
T Consensus 148 m~aNnE~G~IQpI~ei~~i~k~~~i-~fHvDAvQa~Gkipi~~~~~~vD~ls~SaHK-~~GpkGiGaLyv~~~~~~~--- 222 (386)
T COG1104 148 MHANNETGTIQPIAEIGEICKERGI-LFHVDAVQAVGKIPIDLEELGVDLLSFSAHK-FGGPKGIGALYVRPGVRLE--- 222 (386)
T ss_pred EecccCeeecccHHHHHHHHHHcCC-eEEEehhhhcCceeccccccCcceEEeehhh-ccCCCceEEEEECCCCccC---
Confidence 9999999999999999999999999 8999999999999999999999999999999 7999999999997766653
Q ss_pred CCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHH-cCCCcCCCc-cccc
Q 012991 277 HPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANA-WGTSLGSPP-EICA 354 (452)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~-~~~~ 354 (452)
|.. .|++. ......||.+.+.+.++..|++...+ .++...+++..++++|.+.|.+. +.+.+.+.+ ....
T Consensus 223 -p~i---~GGgQ-E~g~RsGTenv~~Ivg~~~A~~~a~~---~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP 294 (386)
T COG1104 223 -PLI---HGGGQ-ERGLRSGTENVPGIVGFGKAAEIAVE---ELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLP 294 (386)
T ss_pred -cee---ccCcC-CCCCCCCCccHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCC
Confidence 332 22211 11223499999999999999998886 57888889999999999999876 677776664 4557
Q ss_pred ceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCC---CCCCC-CCccceEEecccccCCHHHHH
Q 012991 355 AMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAG---ARDKD-GIITGYARISHQVYNTLEDYE 430 (452)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~---~~~~~-~~~~~~iRis~~~~~t~~di~ 430 (452)
+++.|.+| +...+.+.-.|.. .||++..++.|..... .++. .+... ....+.||+|++.+||++||+
T Consensus 295 ~~~~~~f~-------gv~gE~ll~~L~~-~gI~vStGSACsS~~~-~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~ 365 (386)
T COG1104 295 NILNFSFP-------GVEGESLLLALDL-AGIAVSTGSACSSGSL-EPSHVLRAMGISEELAHGSIRFSLGRFTTEEEID 365 (386)
T ss_pred CeEEEEeC-------CCcHHHHHHhccc-cCeEEeccccccCCCC-CccHHHHHcCCChHHhCccEEEEcCCCCCHHHHH
Confidence 88889887 6788889999965 5999988777643211 1111 11111 234678999999999999999
Q ss_pred HHHHHHHHHHhcc
Q 012991 431 KFRDAVILLVEEG 443 (452)
Q Consensus 431 ~l~~~l~~~~~~~ 443 (452)
+++++++++++.-
T Consensus 366 ~~~~~l~~~i~~l 378 (386)
T COG1104 366 AAAEALKEIIKRL 378 (386)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999763
No 5
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=2.7e-45 Score=363.82 Aligned_cols=380 Identities=18% Similarity=0.205 Sum_probs=305.9
Q ss_pred CHHHHHhhhccCCCCeEEeccCCCCCCcHHHHHHHHHHHHHHhcCCchh---hhhhhhHHHHHHHHHHHhHhCCCCCCcE
Q 012991 25 SEAEIRDEFSHHQHGVARINNGSFGSCPKSVLADQQKWQLKFLQQPDDF---YFNSLRKGILESRAAVKDLINADDVGEI 101 (452)
Q Consensus 25 ~~~~ir~~~~~~~~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~la~~~~~~~~~~i 101 (452)
+++.+|++||.+..+.+|||+++.++.|+.|.+++.+++.....+++.. ......+.++++|+.+++++|++++++|
T Consensus 2 ~~~~~r~~fp~l~~~~iyld~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i 81 (398)
T TIGR03392 2 NPAQFRQQFPALQDGTVYLDSAATALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENI 81 (398)
T ss_pred ChhHHHHhCCccCCCeEEeeCccccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeE
Confidence 5678999999776779999999999999999999999887655555321 2345567889999999999999546899
Q ss_pred EEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHH
Q 012991 102 SLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKG 180 (452)
Q Consensus 102 ~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~ 180 (452)
++|+|+|+++++++.++... .+++||+|++++++|+++...|..+++..|++++.++. +.++.+ ++.++++
T Consensus 82 ~~t~g~t~~l~~~~~~~~~~----~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~----~~~~~~~~~~l~~~ 153 (398)
T TIGR03392 82 VWTRGTTESINLVAQSYARP----RLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPI----GADLLPDIRQLPEL 153 (398)
T ss_pred EEeCChHHHHHHHHHHhhhc----cCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEec----CCCCCcCHHHHHHH
Confidence 99999999999999887311 14789999999999999888888778889999999965 333344 8999999
Q ss_pred HhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCC
Q 012991 181 IEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPS 260 (452)
Q Consensus 181 i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G 260 (452)
+ ++++++|++++++|+||.+.|+++|.++|+++|+ ++++|++|+.|..++++..+++|++++|+|| ++||.|
T Consensus 154 i------~~~t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~-~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K-~~gp~G 225 (398)
T TIGR03392 154 L------TPRTRILALGQMSNVTGGCPDLARAITLAHQYGA-VVVVDGAQGVVHGPPDVQALDIDFYAFSGHK-LYGPTG 225 (398)
T ss_pred h------ccCceEEEEECccccccccCCHHHHHHHHHHcCC-EEEEEhhhhcCCCCCChhhcCCCEEEEeccc-ccCCCc
Confidence 8 5789999999999999999999999999999999 8999999999999888888889999999999 689999
Q ss_pred cEEEEEecCccccCCCCCceeccC----------CCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHH
Q 012991 261 VAFLYCRKSILSSDMHHPVVSHEF----------GNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQ 330 (452)
Q Consensus 261 ~G~l~~~~~~~~~~l~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~ 330 (452)
+|+++++++.++. ..+...... ........+..||+++..++++.++++++.+. |.+++.++..++
T Consensus 226 ~G~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~--g~~~i~~~~~~l 301 (398)
T TIGR03392 226 IGVLYGKTELLEA--MPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDI--DIAAAEAWSVSL 301 (398)
T ss_pred eEEEEEcHHHHhh--CCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHh--CHHHHHHHHHHH
Confidence 9999999888765 233321100 00001124557899999999999999999876 999999999999
Q ss_pred HHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCC
Q 012991 331 ALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDG 410 (452)
Q Consensus 331 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~ 410 (452)
++++.+.|.+++++.+..++. .++++|.++ +.++.++.+.|.+ +||.++.+..+.. ...+. .
T Consensus 302 ~~~l~~~l~~l~g~~~~~~~~--~~i~~~~~~-------~~~~~~l~~~L~~-~gI~v~~g~~~~~-------~~~~~-~ 363 (398)
T TIGR03392 302 ADLAEERLAQLPGFRSFRCPG--SSLLAFDFA-------GVHHSDLAALLAE-SGIALRAGQHCAQ-------PLMAA-L 363 (398)
T ss_pred HHHHHHHHhcCCCeEEeCCCC--CcEEEEEeC-------CcCHHHHHHHHHh-CCEEEecCccchH-------HHHHH-h
Confidence 999999999888887665443 568888775 4456789999876 5999986654421 00000 0
Q ss_pred CccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 411 IITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 411 ~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
..++++|+|++.|||.+||++++++|+++++.
T Consensus 364 g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~ 395 (398)
T TIGR03392 364 GVSGTLRASFAPYNTQQDVDALVDAVGAALEL 395 (398)
T ss_pred CCCCEEEEEeeccCCHHHHHHHHHHHHHHHHH
Confidence 12479999999999999999999999998764
No 6
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=100.00 E-value=1.5e-44 Score=360.87 Aligned_cols=381 Identities=22% Similarity=0.292 Sum_probs=308.1
Q ss_pred HHHHhhhccCC-----CCeEEeccCCCCCCcHHHHHHHHHHHHHHhcCCch---hhhhhhhHHHHHHHHHHHhHhCCCCC
Q 012991 27 AEIRDEFSHHQ-----HGVARINNGSFGSCPKSVLADQQKWQLKFLQQPDD---FYFNSLRKGILESRAAVKDLINADDV 98 (452)
Q Consensus 27 ~~ir~~~~~~~-----~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~la~~~~~~~~ 98 (452)
..+|++||... .+.+|||+++.++.|+.|.+++.+++..+..++.. .......+.++++|+.+++++|++++
T Consensus 15 ~~~r~~fp~~~~~~~~~~~iyLd~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~ 94 (424)
T PLN02855 15 AETRPDFPILDQTVNGSKLVYLDNAATSQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTS 94 (424)
T ss_pred HHHHHhCchhccccCCCCeEEeeCccccCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 55799999754 36899999999999999999999988776555433 22344556789999999999999645
Q ss_pred CcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHH
Q 012991 99 GEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEF 177 (452)
Q Consensus 99 ~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l 177 (452)
++|++|+|+|++++.++.++... .+++|++|+++.++|+++...|..+++..|++++.++++ .++.+ ++++
T Consensus 95 ~~v~~t~g~t~al~~i~~~~~~~----~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~----~~~~~~~~~l 166 (424)
T PLN02855 95 REIVFTRNATEAINLVAYTWGLA----NLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLT----PDEVLDVEQL 166 (424)
T ss_pred CEEEEeCCHHHHHHHHHHHhhhh----cCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecC----CCCCcCHHHH
Confidence 79999999999999998865211 257899999999999999999988888899999999652 22334 8999
Q ss_pred HHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcC
Q 012991 178 KKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFC 257 (452)
Q Consensus 178 ~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g 257 (452)
++.+ .+++++|++++++|+||.+.|+++|.++|+++|+ ++++|++|+.|..++++..+++|++++|+|| ++|
T Consensus 167 ~~~i------~~~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~-~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K-~~g 238 (424)
T PLN02855 167 KELL------SEKTKLVATHHVSNVLGSILPVEDIVHWAHAVGA-KVLVDACQSVPHMPVDVQTLGADFLVASSHK-MCG 238 (424)
T ss_pred HHHh------ccCceEEEEeCccccccccCCHHHHHHHHHHcCC-EEEEEhhhhcCCcCCCchhcCCCEEEeeccc-ccC
Confidence 9999 5689999999999999999999999999999999 8999999999999999888899999999999 689
Q ss_pred CCCcEEEEEecCccccCCCCCceeccCC------C----CcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHH
Q 012991 258 PPSVAFLYCRKSILSSDMHHPVVSHEFG------N----GLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRN 327 (452)
Q Consensus 258 ~~G~G~l~~~~~~~~~~l~~~~~~~~~~------~----~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~ 327 (452)
|.|+|++++++++++. ..+....+.. . ......+..||+++..++++.++++++.+. |.+++.++.
T Consensus 239 p~G~G~l~~~~~~~~~--~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~--g~~~i~~~~ 314 (424)
T PLN02855 239 PTGIGFLWGKSDLLES--MPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEI--GMDRIHEYE 314 (424)
T ss_pred CCccEEEEEchhhhhc--CCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHh--CHHHHHHHH
Confidence 9999999999988876 3444321110 0 001234567899999999999999999876 999999999
Q ss_pred HHHHHHHHHHHHHHcCCCcCCCcc----cccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCC
Q 012991 328 HEQALKMARMLANAWGTSLGSPPE----ICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQA 403 (452)
Q Consensus 328 ~~~~~~l~~~L~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~ 403 (452)
.++++++++.|.+++++++..+.. .+.+++.|.++ +.+..++.+.|.+++||.++.++.+..
T Consensus 315 ~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~-------~~~~~~v~~~L~~~~gI~v~~g~~c~~------- 380 (424)
T PLN02855 315 VELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVE-------GIHPTDLSTFLDQQHGVAIRSGHHCAQ------- 380 (424)
T ss_pred HHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEEC-------CcCHHHHHHHhcccCCEEEechhhhhH-------
Confidence 999999999999888888776532 34678889886 456778999997656999987654421
Q ss_pred CCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 404 GARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 404 ~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
...+. ...++++|+|++.|||++||++++++|++++..
T Consensus 381 ~~~~~-~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~ 418 (424)
T PLN02855 381 PLHRY-LGVNASARASLYFYNTKEEVDAFIHALKDTIAF 418 (424)
T ss_pred HHHHH-hCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHH
Confidence 00000 012468999999999999999999999998865
No 7
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=100.00 E-value=1.5e-42 Score=345.01 Aligned_cols=379 Identities=18% Similarity=0.271 Sum_probs=300.0
Q ss_pred HHHhhhccCC-----CCeEEeccCCCCCCcHHHHHHHHHHHHHHhcCCch---hhhhhhhHHHHHHHHHHHhHhCCCCCC
Q 012991 28 EIRDEFSHHQ-----HGVARINNGSFGSCPKSVLADQQKWQLKFLQQPDD---FYFNSLRKGILESRAAVKDLINADDVG 99 (452)
Q Consensus 28 ~ir~~~~~~~-----~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~la~~~~~~~~~ 99 (452)
++|++||... .+++|||+++.++.|+.|.+++.+++.....++.. .......+.++++|+.+++++|++.++
T Consensus 2 ~~~~~f~~~~~~~~~~~~~yld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~ 81 (403)
T TIGR01979 2 NIRADFPILKRKINGKPLVYLDSAATSQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDE 81 (403)
T ss_pred chhhhCchhcCCCCCCceEEEeCccccCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCC
Confidence 5788999753 36899999999999999999999888765555543 223445678899999999999996457
Q ss_pred cEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHH
Q 012991 100 EISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFK 178 (452)
Q Consensus 100 ~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~ 178 (452)
++++|+|+|+++.+++.++... .+++|++|++++++|+++...|..+++..|++++.+++ +.++.+ +++++
T Consensus 82 ~v~~~~g~t~~l~~~~~~~~~~----~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~----~~~~~~~~~~l~ 153 (403)
T TIGR01979 82 EIVFTRGTTESINLVAYSWGDS----NLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPL----DDDGTLDLDDLE 153 (403)
T ss_pred eEEEeCCHHHHHHHHHHHhhhh----cCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEec----CCCCCCCHHHHH
Confidence 9999999999999998876321 24789999999999999888888878888999999954 334445 89999
Q ss_pred HHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCC
Q 012991 179 KGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCP 258 (452)
Q Consensus 179 ~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~ 258 (452)
+.+ .+++++|++++++|+||.+.|+++|.++|+++|+ ++++|++|+.|..++++..+++|++++|+||+ +||
T Consensus 154 ~~i------~~~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~-~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~-~gp 225 (403)
T TIGR01979 154 KLL------TEKTKLVAITHVSNVLGTVNPVEEIAKLAHQVGA-KVLVDGAQAVPHMPVDVQALDCDFYVFSGHKM-YGP 225 (403)
T ss_pred HHh------ccCCeEEEEEcccccccccCCHHHHHHHHHHcCC-EEEEEchhhcCccccCccccCCCEEEEecccc-cCC
Confidence 998 5789999999999999999999999999999999 79999999999999988888999999999995 789
Q ss_pred CCcEEEEEecCccccCCCCCceeccC--------C--CCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHH
Q 012991 259 PSVAFLYCRKSILSSDMHHPVVSHEF--------G--NGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNH 328 (452)
Q Consensus 259 ~G~G~l~~~~~~~~~~l~~~~~~~~~--------~--~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~ 328 (452)
.|+|++++++++++. ..++...+. . .......+..|+++...++++.++++++.+. |.+.++++..
T Consensus 226 ~G~g~l~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~--g~~~~~~~~~ 301 (403)
T TIGR01979 226 TGIGVLYGKEELLEQ--MPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAI--GLENIEAHEH 301 (403)
T ss_pred CCceEEEEchHHHhc--CCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHh--CHHHHHHHHH
Confidence 999999999887765 233321100 0 0000122346889999999999999998876 8999999999
Q ss_pred HHHHHHHHHHHHHcCCCcCCCcc--cccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCC
Q 012991 329 EQALKMARMLANAWGTSLGSPPE--ICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGAR 406 (452)
Q Consensus 329 ~~~~~l~~~L~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~ 406 (452)
++++++++.|.+++++++..+.. .+++++.|.++ +.+..++.+.|.+ .||.++.+..+.. +..
T Consensus 302 ~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~-------~~~~~~~~~~L~~-~gI~v~~g~~~~~-------~~~ 366 (403)
T TIGR01979 302 ELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVE-------GVHPHDVGTILDE-EGIAVRSGHHCAQ-------PLM 366 (403)
T ss_pred HHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeC-------CcCHHHHHHHHhh-CCEEEcchhhhhH-------HHH
Confidence 99999999999887888776542 34778888875 3456678888865 5999975443210 000
Q ss_pred CCCCCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 407 DKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 407 ~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
.. ...++++|+|++.+||++||++++++|+++++.
T Consensus 367 ~~-~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~ 401 (403)
T TIGR01979 367 RR-FGVPATCRASFYIYNTEEDIDALVEALKKVRKF 401 (403)
T ss_pred HH-hCCCCEEEEEeccCCCHHHHHHHHHHHHHHHHH
Confidence 00 112478999999999999999999999987753
No 8
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-42 Score=324.18 Aligned_cols=407 Identities=25% Similarity=0.332 Sum_probs=296.9
Q ss_pred cCCCccccccCCCCCCCCC-----HHHHHhhhccCCCCeEEeccCCCCCCcHHHHHHHHHHHHHHhcCCchh-hhhhhhH
Q 012991 7 NGELTHHVSKKPKLTRCIS-----EAEIRDEFSHHQHGVARINNGSFGSCPKSVLADQQKWQLKFLQQPDDF-YFNSLRK 80 (452)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~-----~~~ir~~~~~~~~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~-~~~~~~~ 80 (452)
||+---+.++++.|.+... -+.+-.+ +.+.+.+|||++.+++.+..|++++..++...+++|++. +.+....
T Consensus 8 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~vyld~~at~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~ 85 (428)
T KOG1549|consen 8 NAAAASSAHRSPKPPALSPSGRLRKSFIISE--HHGTRPVYLDNQATGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAED 85 (428)
T ss_pred chhhccccccccCccccCCCccccchhhhhc--cCCCccEEEecCcCCCCCHHHHHHHHHHHHHhhcCCCccccchhhhH
Confidence 3333334555555543322 2333333 466789999999999999999999999999999999998 6666677
Q ss_pred HHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEE
Q 012991 81 GILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVE 160 (452)
Q Consensus 81 ~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~ 160 (452)
.++++|+.+|+++|++ +.+|+||+|+|+++++++..++|.+.. +...+||+.+.+|+++...+..+ +.-|++++.
T Consensus 86 ~~E~aR~~VAklInAd-~~dIiFts~ATEs~Nlvl~~v~~~~~~---~~~k~iitl~~eH~~v~~s~~~l-~~~g~~Vt~ 160 (428)
T KOG1549|consen 86 AVEAAREQVAKLINAD-PSDIVFTSGATESNNLVLKGVARFFGD---KTKKHIITLQTEHPCVLDSCRAL-QEEGLEVTY 160 (428)
T ss_pred HHHHHHHHHHHHhCCC-CCcEEEeCCchHHHHHHHHHhhccccc---cccceEEEecccCcchhHHHHHH-HhcCeEEEE
Confidence 7999999999999997 566999999999999999999875531 22339999999999999999986 667899999
Q ss_pred EeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccc
Q 012991 161 VQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDV 239 (452)
Q Consensus 161 ~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~ 239 (452)
+|+ .+++.. .+.|++.| .++|++|.+.+.+|.+|++.|+++|.++|+++++ .+++|+||+.|.+++|+
T Consensus 161 lpv----~~~~~~d~~~~~~~i------~~~T~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v-~v~~DaAQavG~i~vDV 229 (428)
T KOG1549|consen 161 LPV----EDSGLVDISKLREAI------RSKTRLVSIMHVNNEIGVLQPVKEIVKICREEGV-QVHVDAAQAVGKIPVDV 229 (428)
T ss_pred ecc----CccccccHHHHHHhc------CCCceEEEEEecccCccccccHHHHHHHhCcCCc-EEEeehhhhcCCccccH
Confidence 954 445555 99999999 6899999999999999999999999999999999 89999999999999999
Q ss_pred cccCccEEEEcCcccCcCCCCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcC
Q 012991 240 KEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGG 319 (452)
Q Consensus 240 ~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g 319 (452)
+.+++|++++|+||| +||+|+|++|+++..-.-.+.++ ++++.....++.||.+...+.++..|.++.....++
T Consensus 230 ~eln~D~~s~s~HK~-ygp~~iGaLYvr~~~~~~~~~p~-----~~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~~~~~~ 303 (428)
T KOG1549|consen 230 QELNADFLSISAHKI-YGPPGIGALYVRRKRPRLRVEPP-----LSGGGQERGLRSGTVATPLAVGLGSAAEFVNKEMAY 303 (428)
T ss_pred HHcCchheeeecccc-cCCCcceEEEEccCCCcccccCc-----ccCCccccccccCCcCchhhhhhHHHHHHHHhhcch
Confidence 999999999999996 88888999999972221111222 334444566788999999999999999998874333
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HcCCCcCCCc-ccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCC
Q 012991 320 IDGIMQRNHEQALKMARMLAN-AWGTSLGSPP-EICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKD 397 (452)
Q Consensus 320 ~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~ 397 (452)
.+.+. ..+...+...+.. .+.+.+.+++ ....+.+.|.++.. ....+...+. .+.++.+..+-..
T Consensus 304 ~~~~~---~~~~~~ll~~i~~~~~~~~~~G~~~~~~~~~~~~~~~~~-------~g~~~~~~~~---~~~l~s~~a~~~~ 370 (428)
T KOG1549|consen 304 DEAII---KRLSEKLLMGIGQSLPEVTLNGSGKSRYPGLVSLSFPYV-------EGESLLMDLK---DVALSSGSACTSA 370 (428)
T ss_pred hHHHH---HHHHHHHHHHHhhhCchhhccCCcccccccceeeecccc-------cCcchhhhhh---hhhhcccchhhcC
Confidence 44443 3455566665543 3344444433 33455666666511 1111111110 1111110000000
Q ss_pred CCCCCCCC---CCC-CCCccceEEecccccCCHHHHHHHHHHHHHHHhcccccccccc
Q 012991 398 DGQPQAGA---RDK-DGIITGYARISHQVYNTLEDYEKFRDAVILLVEEGQVCQMLLT 451 (452)
Q Consensus 398 ~~~~~~~~---~~~-~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~~~~~~~~~~ 451 (452)
. ....+. ... ......++|||++.|+|++|++++++.+++.+...+.|+.|..
T Consensus 371 ~-~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~di~~~~~~i~~~v~~~~~~s~l~~ 427 (428)
T KOG1549|consen 371 S-LEPSYVLRAIGVDEDLAHSSIRISIGRYTTEEDIDYLVDAIKKLVSLLREMSPLWE 427 (428)
T ss_pred C-CCcchhhhhcCcchhhhcceeEEeeeeeCcHHHHHHHHHHHHHHHHhccccCCCCC
Confidence 0 000000 000 1345678999999999999999999999999999999988764
No 9
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=100.00 E-value=4e-42 Score=337.88 Aligned_cols=356 Identities=24% Similarity=0.339 Sum_probs=286.3
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHHHHhcCCch---hhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHH
Q 012991 41 ARINNGSFGSCPKSVLADQQKWQLKFLQQPDD---FYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQ 117 (452)
Q Consensus 41 ~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~ 117 (452)
||||++++++.|+.|++++.+++.....++.+ .+...+.+.++++++.+++++|++.+++|+|++|+|++++.++.+
T Consensus 1 iYld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~ 80 (371)
T PF00266_consen 1 IYLDNAGTGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASS 80 (371)
T ss_dssp EEEBTSSS-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHH
T ss_pred CEeeCCCccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhc
Confidence 79999999999999999999999888777722 334567888999999999999998337999999999999999998
Q ss_pred hhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEE
Q 012991 118 IGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAII 196 (452)
Q Consensus 118 l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~ 196 (452)
+.+ .+++|++|++.+.+|+++..+|..++++.|.+++.++.+ ..+.+ ++++++++ ++++++|++
T Consensus 81 l~~-----~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~----~~~~~~~~~~~~~l------~~~~~lv~~ 145 (371)
T PF00266_consen 81 LLN-----PLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPAD----PGGSLDLEDLEEAL------NPDTRLVSI 145 (371)
T ss_dssp HHH-----HGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEG----TTSSCSHHHHHHHH------HTTESEEEE
T ss_pred ccc-----ccccccccccccccccccccccccccccchhhhcccccc----ccchhhhhhhhhhh------ccccceEEe
Confidence 842 148899999999999999999999888999999999652 23333 89999999 589999999
Q ss_pred eccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCccccCCC
Q 012991 197 DHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMH 276 (452)
Q Consensus 197 ~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~ 276 (452)
++.+|.+|.+.|+++|.++||++|+ ++++|++|++|..++|+..+++|++++|+|| ++||+|+|+++++++.+++ +.
T Consensus 146 ~~~~~~tG~~~pi~~I~~~~~~~~~-~~~vD~~~~~g~~~id~~~~~~D~~~~s~~K-l~gp~G~g~l~v~~~~~~~-~~ 222 (371)
T PF00266_consen 146 SHVENSTGVRNPIEEIAKLAHEYGA-LLVVDAAQSAGCVPIDLDELGADFLVFSSHK-LGGPPGLGFLYVRPEAIER-LR 222 (371)
T ss_dssp ESBETTTTBBSSHHHHHHHHHHTTS-EEEEE-TTTTTTSS--TTTTTESEEEEESTS-TTSSSTEEEEEEEHHHHHH-HH
T ss_pred ecccccccEEeeeceehhhhhccCC-ceeEechhccccccccccccccceeeecccc-cCCCCchhhheehhhhhhc-cc
Confidence 9999999999999999999999999 8999999999999999999999999999999 8999999999999988876 21
Q ss_pred CCceeccCCC---------CcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcC
Q 012991 277 HPVVSHEFGN---------GLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLG 347 (452)
Q Consensus 277 ~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 347 (452)
+....+.+.. ......++.||+++..++++..+++++.+. |.+++.++..++.+++.+.|.+++++.+.
T Consensus 223 p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~--g~~~i~~~~~~l~~~~~~~l~~~~~~~~~ 300 (371)
T PF00266_consen 223 PAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEI--GIERIRERIRELAEYLREALEELPGIEVL 300 (371)
T ss_dssp TSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTTTEEES
T ss_pred cccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhcc--ccccchhhhhhHHHHHHhhhhcCCceeEe
Confidence 1111111000 001123456899999999999999999765 99999999999999999999999888876
Q ss_pred CC--cccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCC
Q 012991 348 SP--PEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNT 425 (452)
Q Consensus 348 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t 425 (452)
.+ ...+.+++.|.++ +.+...+.+.|.++ ||.+..+..+.. +.... ...++.+|+|++.|||
T Consensus 301 ~~~~~~~~~~i~~~~~~-------~~~~~~~~~~L~~~-~I~~~~G~~~~~-------~~~~~-~~~~~~iRvS~~~~nt 364 (371)
T PF00266_consen 301 GPDDEPRRPSIVSFNLP-------GSDADDVVKYLEER-GIAVSTGSACAG-------PSLDI-LGMGGVIRVSLHYYNT 364 (371)
T ss_dssp SSSCGGBGTTEEEEEET-------TSSHHHHHHHHHHH-TEEEEESTTTCH-------HHHHH-HHTTTEEEEE-GTTSS
T ss_pred eecccccccceEEEeec-------CCCHHHHHHHHhhc-CEEEeccCcccH-------HHHHH-hCCCCEEEEeccCCCC
Confidence 54 3456889999885 66788999999887 999987555420 00000 0123799999999999
Q ss_pred HHHHHHH
Q 012991 426 LEDYEKF 432 (452)
Q Consensus 426 ~~di~~l 432 (452)
.+||++|
T Consensus 365 ~~dv~~l 371 (371)
T PF00266_consen 365 EEDVDRL 371 (371)
T ss_dssp HHHHHHH
T ss_pred HHHHhhC
Confidence 9999986
No 10
>PLN02651 cysteine desulfurase
Probab=100.00 E-value=1.2e-40 Score=326.31 Aligned_cols=352 Identities=19% Similarity=0.250 Sum_probs=280.8
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHHHHhcCCch---hhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHH
Q 012991 41 ARINNGSFGSCPKSVLADQQKWQLKFLQQPDD---FYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQ 117 (452)
Q Consensus 41 ~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~ 117 (452)
+|||++++++.|+.|++++.+++....++|+. .+...+.+.++++++.+++++|++ +++++||+|+|+++++++.+
T Consensus 1 iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~-~~~v~~t~~~t~a~~~~l~~ 79 (364)
T PLN02651 1 LYLDMQATTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGAD-PKEIIFTSGATESNNLAIKG 79 (364)
T ss_pred CcccCcCCCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCC-CCeEEEeCCHHHHHHHHHHH
Confidence 59999999999999999999988765566654 123556778999999999999996 78999999999999998877
Q ss_pred hhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEE
Q 012991 118 IGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAII 196 (452)
Q Consensus 118 l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~ 196 (452)
+.+. ..++|++|++++.+|+++...|..+ ...|++++.+++ +.++.+ ++++++++ ++++++|++
T Consensus 80 ~~~~----~~~~g~~vl~~~~~h~s~~~~~~~~-~~~g~~v~~v~~----~~~~~~d~~~l~~~i------~~~t~lv~v 144 (364)
T PLN02651 80 VMHF----YKDKKKHVITTQTEHKCVLDSCRHL-QQEGFEVTYLPV----KSDGLVDLDELAAAI------RPDTALVSV 144 (364)
T ss_pred HHHh----ccCCCCEEEEcccccHHHHHHHHHH-HhcCCEEEEEcc----CCCCcCCHHHHHHhc------CCCcEEEEE
Confidence 6432 1367899999999999998888775 467999999954 333444 89999999 578999999
Q ss_pred eccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCccccCCC
Q 012991 197 DHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMH 276 (452)
Q Consensus 197 ~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~ 276 (452)
++++|+||.+.|+++|.++||++|+ ++++|++|+.|..++++..+++|++++|+||| +||.|+|+++++++.... +
T Consensus 145 ~~~~n~tG~~~~l~~I~~~~~~~g~-~~~vD~a~~~g~~~~~~~~~~~D~~~~s~hK~-~gp~G~g~l~v~~~~~~~-l- 220 (364)
T PLN02651 145 MAVNNEIGVIQPVEEIGELCREKKV-LFHTDAAQAVGKIPVDVDDLGVDLMSISGHKI-YGPKGVGALYVRRRPRVR-L- 220 (364)
T ss_pred ECCCCCceecccHHHHHHHHHHcCC-EEEEEcchhhCCcccCcccCCCCEEEechhhh-CCCCceEEEEEcCCCCCC-C-
Confidence 9999999999999999999999999 79999999999999999999999999999997 899999999999988775 3
Q ss_pred CCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHH-HcCCCcCCCc--c-c
Q 012991 277 HPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLAN-AWGTSLGSPP--E-I 352 (452)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~--~-~ 352 (452)
.|.. .|++. ...+..||+++..++++.++++++.+ +.+.+.++.+++.+++.+.|.+ ++++++..+. . .
T Consensus 221 ~p~~---~g~~~-~~~~~~GT~~~~~~~~l~~al~~~~~---~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~ 293 (364)
T PLN02651 221 EPLM---SGGGQ-ERGRRSGTENTPLVVGLGAACELAMK---EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKR 293 (364)
T ss_pred Cccc---cCCCc-cCCccCCCccHHHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccC
Confidence 3332 22221 12345799999999999999999986 4599999999999999999986 5688887752 2 2
Q ss_pred ccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCC----ccceEEecccccCCHHH
Q 012991 353 CAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGI----ITGYARISHQVYNTLED 428 (452)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~----~~~~iRis~~~~~t~~d 428 (452)
..+++.|.++ +.++.++...|.+ |.++.+..|...-. ..+.+.++.+. ..+.+|+|++.|||++|
T Consensus 294 ~~~i~~~~~~-------~~~~~~~~~~L~~---i~v~~g~~c~~~~~-~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~d 362 (364)
T PLN02651 294 YPGTLNLSFA-------YVEGESLLMGLKE---VAVSSGSACTSASL-EPSYVLRALGVPEEMAHGSLRLGVGRFTTEEE 362 (364)
T ss_pred cCCEEEEEeC-------CCCHHHHHHHhCC---EEEEchhhcCCCCC-CcCHHHHHcCCChHHhCceEEEEcCCCCCHHH
Confidence 3568888886 5577889999842 88876665432100 01111112221 24799999999999999
Q ss_pred HH
Q 012991 429 YE 430 (452)
Q Consensus 429 i~ 430 (452)
||
T Consensus 363 id 364 (364)
T PLN02651 363 VD 364 (364)
T ss_pred cC
Confidence 85
No 11
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=100.00 E-value=2.4e-40 Score=326.28 Aligned_cols=363 Identities=17% Similarity=0.221 Sum_probs=286.2
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHHHHhcCCchh--hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHh
Q 012991 41 ARINNGSFGSCPKSVLADQQKWQLKFLQQPDDF--YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQI 118 (452)
Q Consensus 41 ~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l 118 (452)
+|||+++.++.|++|++++.+++....++++.. +...+.+.++++|+.+++++|++ +++|+||+|+|+++++++.++
T Consensus 1 ~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~-~~~i~~t~~~t~a~~~al~~~ 79 (379)
T TIGR03402 1 IYLDNNATTRVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAE-PDEIIFTSGGTESDNTAIKSA 79 (379)
T ss_pred CcCCCcCCCCCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCC-CCeEEEeCcHHHHHHHHHHHH
Confidence 599999999999999999999887665666542 23455778899999999999996 789999999999999998876
Q ss_pred hcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEe
Q 012991 119 GRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIID 197 (452)
Q Consensus 119 ~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~ 197 (452)
.. ...++++|+++..+|+++...+..+ ...|.+++.++. +.++.+ ++++++.+ .+++++|+++
T Consensus 80 ~~-----~~~~~~~vv~~~~~~~s~~~~~~~~-~~~G~~v~~v~~----~~~g~~~~~~l~~~i------~~~~~lv~i~ 143 (379)
T TIGR03402 80 LA-----AQPEKRHIITTAVEHPAVLSLCQHL-EKQGYKVTYLPV----DEEGRLDLEELRAAI------TDDTALVSVM 143 (379)
T ss_pred HH-----hcCCCCeEEEcccccHHHHHHHHHH-HHcCCEEEEEcc----CCCCcCCHHHHHHhc------CCCcEEEEEE
Confidence 31 1245689999999999998888775 557999999954 334445 89999998 5688999999
Q ss_pred ccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCccccCCCC
Q 012991 198 HITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMHH 277 (452)
Q Consensus 198 ~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~~ 277 (452)
+++|+||.+.|+++|.++|+++|+ ++++|++|+.|..++++..+++|++++|+|| ++||.|+|+++++++... .
T Consensus 144 ~~~n~tG~~~~~~~I~~l~~~~g~-~vivD~~~~~g~~~~~~~~~~~D~~~~s~~K-~~gp~G~g~l~v~~~~~~----~ 217 (379)
T TIGR03402 144 WANNETGTIFPIEEIGEIAKERGA-LFHTDAVQAVGKIPIDLKEMNIDMLSLSGHK-LHGPKGVGALYIRKGTRF----R 217 (379)
T ss_pred cccCCeeecccHHHHHHHHHHcCC-EEEEECcccccccccCcccCCCCEEEEcHHH-cCCCCceEEEEECCCCCC----C
Confidence 999999999999999999999999 8999999999999999999999999999999 799999999999876532 2
Q ss_pred CceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHH-HcCCCcCCCcccc-cc
Q 012991 278 PVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLAN-AWGTSLGSPPEIC-AA 355 (452)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~-~~ 355 (452)
|.. .|+.. ......|++++..++++.+++++..+ ..+.+.++.+++++++++.|.+ ++++.+..++..+ ++
T Consensus 218 p~~---~g~~~-~~~~~~gt~~~~~~~~l~~al~~~~~---~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~ 290 (379)
T TIGR03402 218 PLL---RGGHQ-ERGRRAGTENVPGIVGLGKAAELATE---HLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPN 290 (379)
T ss_pred Ccc---cCCcc-CCCcCCCCccHHHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCC
Confidence 321 11111 12234689999999999999999876 5788889999999999999985 7787776654322 45
Q ss_pred eEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCC----CCccceEEecccccCCHHHHHH
Q 012991 356 MVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKD----GIITGYARISHQVYNTLEDYEK 431 (452)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~iRis~~~~~t~~di~~ 431 (452)
++.|.++ +.++.++.+.|.+ +||.++.++.|...... .+.+.+.. ...++.+|+|++.+||++||++
T Consensus 291 ~~~~~~~-------~~~~~~~~~~l~~-~gI~v~~g~~c~~~~~~-~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~ 361 (379)
T TIGR03402 291 TVNISFE-------YIEGEAILLLLDM-EGICASSGSACTSGSLE-PSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDY 361 (379)
T ss_pred EEEEEec-------CCCHHHHHHhhcc-CCEEEEchhhcCCCCCC-cCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHH
Confidence 6766664 3466789998865 59999877766432100 00000011 1125789999999999999999
Q ss_pred HHHHHHHHHhc
Q 012991 432 FRDAVILLVEE 442 (452)
Q Consensus 432 l~~~l~~~~~~ 442 (452)
++++|+++++.
T Consensus 362 ~~~~l~~~~~~ 372 (379)
T TIGR03402 362 VLEVLPPIIAR 372 (379)
T ss_pred HHHHHHHHHHH
Confidence 99999998865
No 12
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=100.00 E-value=2.4e-40 Score=328.51 Aligned_cols=373 Identities=20% Similarity=0.219 Sum_probs=290.1
Q ss_pred HHHHHhhhccCCCC-eEEeccCCCCCCcHHHHHHHHHHHHHHhcCCchhh--hhhhhHHHHHHHHHHHhHhCCCCCCcEE
Q 012991 26 EAEIRDEFSHHQHG-VARINNGSFGSCPKSVLADQQKWQLKFLQQPDDFY--FNSLRKGILESRAAVKDLINADDVGEIS 102 (452)
Q Consensus 26 ~~~ir~~~~~~~~~-~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~la~~~~~~~~~~i~ 102 (452)
+..+|++||..+.. ++|||++++++.|+.+++++.+.+.....++...+ .....+..+++++.+++++|++ +++++
T Consensus 3 ~~~~r~~f~~~~~~~~~yl~~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~-~~~v~ 81 (397)
T TIGR01976 3 VEAVRGQFPALADGDRVFFDNPAGTQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNAD-PPEVV 81 (397)
T ss_pred hhHHHhhCCcCCCCCeEEecCCccCCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCC-CCeEE
Confidence 46789999986554 79999999999999999999998866544333222 2345677899999999999996 56799
Q ss_pred EecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHH
Q 012991 103 LVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGI 181 (452)
Q Consensus 103 ~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i 181 (452)
+++|+|+++..++.++.. .+++||+|++++++|+++...|..+++..|++++.++++. +++.+ ++++++.+
T Consensus 82 ~~~~~t~~l~~~~~~~~~-----~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~l~~~i 153 (397)
T TIGR01976 82 FGANATSLTFLLSRAISR-----RWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDE---ATGELHPDDLASLL 153 (397)
T ss_pred EeCCHHHHHHHHHHHHHh-----cCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccc---cCCCcCHHHHHHhc
Confidence 999999999888876631 2478999999999999998888776788999999996521 12344 89999998
Q ss_pred hccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCc
Q 012991 182 EKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSV 261 (452)
Q Consensus 182 ~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~ 261 (452)
++++++|++++++|+||.+.|+++|.++|+++|+ ++++|++|+.|..++++..+++|++++|+||| +|++ +
T Consensus 154 ------~~~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~-~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~-~g~~-~ 224 (397)
T TIGR01976 154 ------SPRTRLVAVTAASNTLGSIVDLAAITELVHAAGA-LVVVDAVHYAPHGLIDVQATGADFLTCSAYKF-FGPH-M 224 (397)
T ss_pred ------CCCceEEEEeCCCCCCCccCCHHHHHHHHHHcCC-EEEEehhhhccccCCCHHHcCCCEEEEechhh-cCCc-e
Confidence 5689999999999999999999999999999999 89999999998888888888999999999998 5765 7
Q ss_pred EEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcC--------------HHHHHHHH
Q 012991 262 AFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGG--------------IDGIMQRN 327 (452)
Q Consensus 262 G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g--------------~~~~~~~~ 327 (452)
|+++++++++.. + .+....+. .......+..|++++..++++.++++++.+. | ++.+.++.
T Consensus 225 G~l~~~~~~~~~-l-~~~~~~~~-~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~ 299 (397)
T TIGR01976 225 GILWGRPELLMN-L-PPYKLTFS-YDTGPERFELGTPQYELLAGVVAAVDYLAGL--GESANGSRRERLVASFQAIDAYE 299 (397)
T ss_pred EEEEEcHHHHhh-C-CCccccCc-cCCCcchhcCCCCCHHHHHHHHHHHHHHHHh--CcccccchhhhhhHHHHHHHHHH
Confidence 999999887765 2 23221111 1111234567899999999999999998865 4 67788888
Q ss_pred HHHHHHHHHHHHHHcCCCcCCC--cccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCC
Q 012991 328 HEQALKMARMLANAWGTSLGSP--PEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGA 405 (452)
Q Consensus 328 ~~~~~~l~~~L~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~ 405 (452)
.++.+++++.|.+++++++..+ ....++++.+.++ +.+..++.+.|.+ +||.++.+..+.. .+
T Consensus 300 ~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~~L~~-~gI~v~~~~~~~~-------~~ 364 (397)
T TIGR01976 300 NRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVH-------GLPPQRVVRRLAD-QGIDAWAGHFYAV-------RL 364 (397)
T ss_pred HHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeC-------CcCHHHHHHHHHH-CCeEEEeCccchH-------HH
Confidence 9999999999988766777655 2234778888764 3466789999976 4999986543310 00
Q ss_pred CCCC--CCccceEEecccccCCHHHHHHHHHHH
Q 012991 406 RDKD--GIITGYARISHQVYNTLEDYEKFRDAV 436 (452)
Q Consensus 406 ~~~~--~~~~~~iRis~~~~~t~~di~~l~~~l 436 (452)
.... ....+++|+|++.++|++||++++++|
T Consensus 365 ~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 365 LRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred HHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 0000 123468999999999999999999864
No 13
>PLN02724 Molybdenum cofactor sulfurase
Probab=100.00 E-value=9.3e-41 Score=354.47 Aligned_cols=397 Identities=18% Similarity=0.183 Sum_probs=295.9
Q ss_pred CCCHHHHH-hhhccCCCCeEEeccCCCCCCc-HHHHHHHHHHHHHHhcCCchh--hhhhhhHHHHHHHHHHHhHhCCCCC
Q 012991 23 CISEAEIR-DEFSHHQHGVARINNGSFGSCP-KSVLADQQKWQLKFLQQPDDF--YFNSLRKGILESRAAVKDLINADDV 98 (452)
Q Consensus 23 ~~~~~~ir-~~~~~~~~~~~~l~~~~~~~~p-~~v~e~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~la~~~~~~~~ 98 (452)
.++++.+| ++||.+ ..++|||+++.++.+ ..|.+++..+.....+++++. .+....+.++++|+.+++++|++..
T Consensus 18 ~~~~~~~R~~~fp~l-~~~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~ 96 (805)
T PLN02724 18 PKPIDELRATEFARL-KGVVYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPS 96 (805)
T ss_pred hhhHHHHHHHHhhhc-CCCEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCcc
Confidence 45689999 589987 458999999998755 566666777766666677653 2345577899999999999999633
Q ss_pred C-cEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCC----ChHHH
Q 012991 99 G-EISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLA----SEEEI 173 (452)
Q Consensus 99 ~-~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~----~~~~~ 173 (452)
+ .|+||+|+|+|+++++.++. +++|++|+++..+|.++. .|..++++.|++++.++++.+.. ..+.+
T Consensus 97 ~~~VvFtsnaT~alnlva~~l~-------~~~gd~Iv~t~~eH~svl-~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~ 168 (805)
T PLN02724 97 DYACVFTSGATAALKLVGETFP-------WSSESHFCYTLENHNSVL-GIREYALEKGAAAIAVDIEEAANQPTNSQGSV 168 (805)
T ss_pred ceEEEEeCChHHHHHHHHHHCC-------CCCCCeEEEeeccccchH-HHHHHHHHcCCeEEeccchhcccccccccccc
Confidence 4 68999999999999998873 578999999999999987 55566788899999996531110 12222
Q ss_pred ---HHHHHHHHh----ccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHc--------CCCEEEEecccccCCcccc
Q 012991 174 ---INEFKKGIE----KGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDE--------GVDQVFVDAAHAMGSIKID 238 (452)
Q Consensus 174 ---~~~l~~~i~----~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~--------~~~~~ivD~a~~~g~~~~~ 238 (452)
.++|++.++ .....++++++|++++.+|.+|.+.|+++|..+++.. ++ ++++|++|++|+.++|
T Consensus 169 ~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~-~v~vDaaQ~~g~~piD 247 (805)
T PLN02724 169 VVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRW-MVLLDAAKGCGTSPPD 247 (805)
T ss_pred ccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcce-EEEeehhhhcCCCCCC
Confidence 245555431 1111135678999999999999999999875555432 36 7999999999999999
Q ss_pred ccccCccEEEEcCcccCcCCCCcEEEEEecCccccCCCCCceeccCCCCc----------------ccccccccccCccc
Q 012991 239 VKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMHHPVVSHEFGNGL----------------PIESAWIGTRDYSA 302 (452)
Q Consensus 239 ~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~ 302 (452)
+..+++|++++|+|||++||.|+|++|++++++.. +.+.+ +|++. ....++.||+++..
T Consensus 248 v~~~~~Dfl~~S~HK~~GgP~G~G~L~vr~~~~~~-l~p~~----~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~ 322 (805)
T PLN02724 248 LSRYPADFVVVSFYKIFGYPTGLGALLVRRDAAKL-LKKKY----FGGGTVAASIADIDFVKRRERVEQRFEDGTISFLS 322 (805)
T ss_pred hhhcCCCEEEEecceeccCCCCceEEEEehhhhhh-hcCCc----cCCCceEEEecccceeeccccHHHHhcCCCcchhH
Confidence 99999999999999987679999999999988765 32232 22211 12356789999999
Q ss_pred cccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHc------CCCcCCCc------ccccceEEEEcCCccccCCh
Q 012991 303 QLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAW------GTSLGSPP------EICAAMVMVGLPSRLRVMGE 370 (452)
Q Consensus 303 ~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~------~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 370 (452)
++++.++++++.++ |.+.+.++..++.+++.+.|.+++ +++++++. ..+++++.|.+....+ ..
T Consensus 323 i~~l~aal~~l~~i--g~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~--~~ 398 (805)
T PLN02724 323 IAALRHGFKLLNRL--TISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADG--SW 398 (805)
T ss_pred HHHHHHHHHHHHHh--ChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCC--CE
Confidence 99999999999987 999999999999999999999886 46777653 2468899998853211 12
Q ss_pred hhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCC--C------------------CCC-CCccceEEecccccCCHHHH
Q 012991 371 DDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGA--R------------------DKD-GIITGYARISHQVYNTLEDY 429 (452)
Q Consensus 371 ~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~--~------------------~~~-~~~~~~iRis~~~~~t~~di 429 (452)
+...++...+ ..+||.++.+++|... .+..++ . +.. +...+++|+|+++|||.+||
T Consensus 399 v~~~~v~~l~-~~~gI~vR~G~~Ca~~--~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDv 475 (805)
T PLN02724 399 VGHREVEKLA-SLSGIQLRTGCFCNPG--ACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDC 475 (805)
T ss_pred eCHHHHHHHH-HhcCcEEeeccccCch--HHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHH
Confidence 3344455444 4579999998887532 111111 0 000 12348999999999999999
Q ss_pred HHHHHHHHHHHh
Q 012991 430 EKFRDAVILLVE 441 (452)
Q Consensus 430 ~~l~~~l~~~~~ 441 (452)
++++++|++..-
T Consensus 476 d~lv~~l~~~~~ 487 (805)
T PLN02724 476 QKFIDFIISSFV 487 (805)
T ss_pred HHHHHHHHHHhh
Confidence 999999999764
No 14
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=100.00 E-value=9.4e-40 Score=324.41 Aligned_cols=364 Identities=16% Similarity=0.209 Sum_probs=276.7
Q ss_pred CCHHHHHhhhccCC----CCeEEeccCCCCCCcHHHHHHHHHHHHHHhcCCchh-hh--hhhhHHHHHHHHHHHhHhCCC
Q 012991 24 ISEAEIRDEFSHHQ----HGVARINNGSFGSCPKSVLADQQKWQLKFLQQPDDF-YF--NSLRKGILESRAAVKDLINAD 96 (452)
Q Consensus 24 ~~~~~ir~~~~~~~----~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~la~~~~~~ 96 (452)
..++.+|++||... +.++|||+++.++.|+.|.+++.+++..+...+... +. ..+....+..++ + +++|++
T Consensus 8 ~~~~~~r~~f~~~~~~~~~~~iyld~~a~g~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~~ 85 (406)
T TIGR01814 8 DPLRALRDEFHLPKIGDENAVIYLDGNSLGLMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVGAK 85 (406)
T ss_pred ChHHHHHHhcCCCcccCCCCcEEecCCCcCcCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccCCC
Confidence 34678899999641 668999988898899999999999887664333211 11 122333344444 5 899996
Q ss_pred CCCcEEEecChhHHHHHHHHHhhcccccCCCCC---CCEEEEeCCcchhHHHHHHHHHHhcCcEE----EEEeCCCCCCC
Q 012991 97 DVGEISLVDNATTAAAIVLQQIGRGFTEGRFHR---NDTVLMLHCAFQAVKKSIQAYVTRAGGSV----VEVQLPFPLAS 169 (452)
Q Consensus 97 ~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~---g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v----~~~~~~~~~~~ 169 (452)
+++|+||+|+|++++.++.++ +++ +++|++++.+|+++..+|...+++.|.++ +.++ .+.
T Consensus 86 -~~~v~~~~~~t~~l~~~~~~~--------~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~----~~~ 152 (406)
T TIGR01814 86 -EDEVVVMNTLTINLHLLLASF--------YKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIE----PRE 152 (406)
T ss_pred -CCcEEEeCCchHHHHHHHHHh--------cCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEec----cCC
Confidence 889999999999999999876 233 34788889999999888876667778887 3442 233
Q ss_pred hHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEE
Q 012991 170 EEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYV 248 (452)
Q Consensus 170 ~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~ 248 (452)
++.+ ++++++.+++. +++|++|++++++|.+|.+.|+++|.++|+++|+ ++++|++|++|..++|+..+++|+++
T Consensus 153 ~g~~~~~~l~~~~~~~---~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~-~~~vD~aq~~G~~~id~~~~gvD~~~ 228 (406)
T TIGR01814 153 EETLRLEDILDTIEKN---GDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGA-LVGFDLAHAVGNVPLDLHDWGVDFAC 228 (406)
T ss_pred CCccCHHHHHHHHHhc---CCCeEEEEEeccccccceecCHHHHHHHHHHcCC-EEEEEcccccCCcccccccCCCCEEE
Confidence 3333 67777777532 4789999999999999999999999999999999 89999999999999999999999999
Q ss_pred EcCcccCcCCCCcEEEEEecCccccCCCCCceeccCCC------------CcccccccccccCccccccHHHHHHHHHHh
Q 012991 249 SNLHKWFFCPPSVAFLYCRKSILSSDMHHPVVSHEFGN------------GLPIESAWIGTRDYSAQLVIPSAVTFVSRF 316 (452)
Q Consensus 249 ~s~~K~l~g~~G~G~l~~~~~~~~~~l~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~al~~~~~~ 316 (452)
+|+|||++||+| |+++++++.... + .|....+++. ......+..||+++..++++.++++++.+.
T Consensus 229 ~s~hK~l~g~pG-~~l~v~~~~~~~-~-~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~ 305 (406)
T TIGR01814 229 WCTYKYLNAGPG-AGAFVHEKHAHT-E-RPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQA 305 (406)
T ss_pred EcCccccCCCCC-eEEEEehhhhhh-c-CCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhc
Confidence 999999988888 777776554433 2 2221111111 001123456899999999999999999876
Q ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHc----CCCcCCCcc--cccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeee
Q 012991 317 EGGIDGIMQRNHEQALKMARMLANAW----GTSLGSPPE--ICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPI 390 (452)
Q Consensus 317 ~~g~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~ 390 (452)
|.+.++++..++.+++++.|.++. ++++..+.. .+++++.|.++ .++.++.+.|.++ ||.+..
T Consensus 306 --g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~--------~~~~~~~~~L~~~-gi~v~~ 374 (406)
T TIGR01814 306 --GMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP--------VPGKAVFQALIKR-GVIGDK 374 (406)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec--------CCHHHHHHHHHHC-CEEEec
Confidence 999999999999999999998763 476666532 34678888774 2456888898764 998731
Q ss_pred cccCCCCCCCCCCCCCCCCCCccceEEecc-cccCCHHHHHHHHHHHHHHH
Q 012991 391 HYQAPKDDGQPQAGARDKDGIITGYARISH-QVYNTLEDYEKFRDAVILLV 440 (452)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~iRis~-~~~~t~~di~~l~~~l~~~~ 440 (452)
..++.+|+|+ +.|||.+||++++++|++++
T Consensus 375 --------------------~~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 375 --------------------REPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred --------------------cCCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 2236899999 68999999999999999875
No 15
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=100.00 E-value=1.2e-39 Score=321.38 Aligned_cols=363 Identities=20% Similarity=0.274 Sum_probs=283.8
Q ss_pred EEeccCCCC-CCcHHHHHHHHHHHHHHhcCCch-hhh--hhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHH
Q 012991 41 ARINNGSFG-SCPKSVLADQQKWQLKFLQQPDD-FYF--NSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQ 116 (452)
Q Consensus 41 ~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~ 116 (452)
+|||+++.. +.|+.+++++.+.+.....++.. .+. ....+..+++++.+++++|+++.++|++|+|+|+++..++.
T Consensus 1 ~yld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~ 80 (376)
T TIGR01977 1 IYFDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALK 80 (376)
T ss_pred CCccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHH
Confidence 589988766 78888999999888764333322 111 23347789999999999999644589999999999999988
Q ss_pred HhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEE
Q 012991 117 QIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAI 195 (452)
Q Consensus 117 ~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~ 195 (452)
++ +++|++|+++.++|+++..++..+++..|.+++.++. +.++.+ .+++++.+ .+++++|+
T Consensus 81 ~~--------~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~----~~~~~~d~~~l~~~~------~~~~~~v~ 142 (376)
T TIGR01977 81 GL--------LKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKC----DNEGLISPERIKRAI------KTNTKLIV 142 (376)
T ss_pred hc--------cCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEec----CCCCCcCHHHHHHhc------CCCCeEEE
Confidence 75 5889999999999999988888778888999999854 333444 88999988 56899999
Q ss_pred EeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCccccCC
Q 012991 196 IDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDM 275 (452)
Q Consensus 196 ~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l 275 (452)
+++++|+||.+.|+++|.++|+++|+ ++|+|++|++|..++++..+++|++++|+|||++||.|+|+++++++.....+
T Consensus 143 ~~~~~n~tG~~~~~~~i~~l~~~~~~-~livD~a~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~ 221 (376)
T TIGR01977 143 VSHASNVTGTILPIEEIGELAQENGI-FFILDAAQTAGVIPIDMTELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPL 221 (376)
T ss_pred EECCCCCccccCCHHHHHHHHHHcCC-EEEEEhhhccCccCCCchhcCCCEEEecccccccCCCCceEEEEcCCcCcCce
Confidence 99999999999999999999999999 79999999999999999888999999999999999999999998877532101
Q ss_pred CCCce---eccCCC-CcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCc-
Q 012991 276 HHPVV---SHEFGN-GLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPP- 350 (452)
Q Consensus 276 ~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~- 350 (452)
..... ...+.. ......+..++++...++++.++++++.+. |.+.++++.+++++++.+.|.+.+++++..+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~--g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~ 299 (376)
T TIGR01977 222 KSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKI--GIANIAKKECMLTEKLLNGLREINKVKIYGPAD 299 (376)
T ss_pred ecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC
Confidence 11000 000000 001123456889998999999999999876 99999999999999999999988888877652
Q ss_pred -ccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCC-CCccceEEecccccCCHHH
Q 012991 351 -EICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKD-GIITGYARISHQVYNTLED 428 (452)
Q Consensus 351 -~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~iRis~~~~~t~~d 428 (452)
....++++|.++ +.+..++.+.|.+++||.++.+..+... ..... ....+.+|++++.++|.+|
T Consensus 300 ~~~~~~~v~~~~~-------~~~~~~~~~~L~~~~gi~v~~g~~~~~~-------~~~~~g~~~~~~iRis~~~~~t~~d 365 (376)
T TIGR01977 300 PANRVGVVSFTVE-------GIDSEEVADILDEKFDIATRTGLHCAPL-------AHKTIGTFATGTIRLSLGYFNTEEE 365 (376)
T ss_pred ccccCCeEEEEEC-------CCCHHHHHHHHhccCCEEEEcccccchH-------HHHHhCCCCCCeEEEecCCCCCHHH
Confidence 234678888885 4567889999977669999765543210 00000 1245799999999999999
Q ss_pred HHHHHHHHHH
Q 012991 429 YEKFRDAVIL 438 (452)
Q Consensus 429 i~~l~~~l~~ 438 (452)
|++++++|++
T Consensus 366 v~~~~~~l~~ 375 (376)
T TIGR01977 366 IEKLLEALSE 375 (376)
T ss_pred HHHHHHHHhh
Confidence 9999999975
No 16
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=100.00 E-value=3.4e-39 Score=318.35 Aligned_cols=366 Identities=17% Similarity=0.219 Sum_probs=283.5
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHHHHhcCCchh--hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHh
Q 012991 41 ARINNGSFGSCPKSVLADQQKWQLKFLQQPDDF--YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQI 118 (452)
Q Consensus 41 ~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l 118 (452)
+|||++++++.|+.|++++.+++.....+|+.. ++....+.+++.++.+++.+++.++++|++|+|+|+++++++.++
T Consensus 1 ~yld~aa~~~~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~ 80 (382)
T TIGR03403 1 VYLDNNATTMLDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGV 80 (382)
T ss_pred CcccCcCCCCCCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHH
Confidence 599999999999999999999998766777653 233445567777788887888733689999999999999999876
Q ss_pred hcccccCCCCC-CCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEE
Q 012991 119 GRGFTEGRFHR-NDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAII 196 (452)
Q Consensus 119 ~~~~~~~~~~~-g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~ 196 (452)
.+.. ..++ +++|+++..+|+++...+.. ++..|.+++.+++ ++++.+ ++++++.+ ++++++|++
T Consensus 81 ~~~~---~~~~~~~~vi~~~~e~ps~~~~~~~-~~~~G~~v~~v~~----~~~g~~d~~~l~~~i------~~~t~lv~~ 146 (382)
T TIGR03403 81 YFDE---ILKGGKNHIITTEVEHPAVRATCAF-LESLGVEVTYLPI----NEQGTITAEQVREAI------TEKTALVSV 146 (382)
T ss_pred HHhh---cccCCCCEEEEcCCccHHHHHHHHH-HHHCCCEEEEEec----CCCCCCCHHHHHHhc------ccCCeEEEE
Confidence 3211 1144 56899999999999888775 4778999999954 334454 88999988 567899999
Q ss_pred eccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCccccCCC
Q 012991 197 DHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMH 276 (452)
Q Consensus 197 ~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~ 276 (452)
++++|+||.+.|+++|.++|+++|+ ++++|++++.|..++++..+++|++++|+||| +||+|+|+++++++...
T Consensus 147 ~~~~n~tG~~~~~~~I~~la~~~g~-~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~-~gp~G~g~l~vr~~~~~---- 220 (382)
T TIGR03403 147 MWANNETGMIFPIKEIGEICKERGV-LFHTDAVQAIGKIPVDVQKAGVDFLSFSAHKF-HGPKGVGGLYIRKGVEL---- 220 (382)
T ss_pred EcccCCCccccCHHHHHHHHHHcCC-EEEEechhhcCCCccCccccCCCEEEEcchhh-CCCCceEEEEECCCCCC----
Confidence 9999999999999999999999999 79999999999999998888999999999996 89999999999887532
Q ss_pred CCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCccc-ccc
Q 012991 277 HPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEI-CAA 355 (452)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~ 355 (452)
.+.+ .|+.. ......|+++...++++..++++..+ +.+...++.+++++++.+.|.+++++.+..+... ..+
T Consensus 221 ~p~~---~g~~~-~~~~~~gt~~~~~~~al~~al~~~~~---~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~ 293 (382)
T TIGR03403 221 TPLF---HGGEH-MGGRRSGTLNVPYIVAMGEAMRLANE---YLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPN 293 (382)
T ss_pred CCcc---cCCCC-CCCcccCCcChHHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCC
Confidence 2321 11111 12233589999999999999988775 5788889999999999999998888887765432 245
Q ss_pred eEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCC----ccceEEecccccCCHHHHHH
Q 012991 356 MVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGI----ITGYARISHQVYNTLEDYEK 431 (452)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~----~~~~iRis~~~~~t~~di~~ 431 (452)
++.|.++ +.+...+...|.+ .||.++.++.|...+.. ......+.+. ..+.+|+|++.+||.+||++
T Consensus 294 ~~~~~~~-------~~~~~~~~~~L~~-~gI~v~~g~~c~~~~~~-~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~ 364 (382)
T TIGR03403 294 TILISIK-------GVEGEAMLWDLNK-AGIAASTGSACASEDLE-ANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDY 364 (382)
T ss_pred EEEEEeC-------CCCHHHHHHhhcc-CCEEEEchhccCCCCCC-cCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHH
Confidence 7778774 4567788888866 59999877665322100 0011111111 24689999999999999999
Q ss_pred HHHHHHHHHhc
Q 012991 432 FRDAVILLVEE 442 (452)
Q Consensus 432 l~~~l~~~~~~ 442 (452)
++++|+++++.
T Consensus 365 ~~~~l~~~~~~ 375 (382)
T TIGR03403 365 TIEVFKKAVQR 375 (382)
T ss_pred HHHHHHHHHHH
Confidence 99999998865
No 17
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=100.00 E-value=6.9e-39 Score=315.49 Aligned_cols=359 Identities=19% Similarity=0.284 Sum_probs=282.7
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHHHHhcCCch---hhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHH
Q 012991 41 ARINNGSFGSCPKSVLADQQKWQLKFLQQPDD---FYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQ 117 (452)
Q Consensus 41 ~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~ 117 (452)
+|||+++.++.|+.+++++.+++.....+|++ .+.....+...++++.+++++++++++++++|+|+|+++++++.+
T Consensus 1 ~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~ 80 (373)
T cd06453 1 VYLDNAATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYG 80 (373)
T ss_pred CcccCccccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHH
Confidence 59999999999999999999888776666543 234566778899999999999986467999999999999999998
Q ss_pred hhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEE
Q 012991 118 IGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAII 196 (452)
Q Consensus 118 l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~ 196 (452)
+.+. ..+|++|++++++|++....+..+++..|.+++.++. +.++.+ ++++++.+ .+++++|++
T Consensus 81 l~~~-----~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~----~~~~~~d~~~l~~~l------~~~~~~v~~ 145 (373)
T cd06453 81 LGRA-----NKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPV----DDDGQLDLEALEKLL------TERTKLVAV 145 (373)
T ss_pred hhhc-----CCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeec----CCCCCcCHHHHHHHh------cCCceEEEE
Confidence 8410 0288999999999999888877777788999999954 334445 89999999 568999999
Q ss_pred eccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCccccCCC
Q 012991 197 DHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMH 276 (452)
Q Consensus 197 ~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~ 276 (452)
++++|+||.+.|+++|.++|+++|+ ++++|++++.|..++++..+++|++++|+|||+++ .|+|++++++++++. +
T Consensus 146 ~~~~~~tG~~~~~~~i~~~~~~~~~-~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~-~g~g~~~~~~~~~~~-~- 221 (373)
T cd06453 146 THVSNVLGTINPVKEIGEIAHEAGV-PVLVDGAQSAGHMPVDVQDLGCDFLAFSGHKMLGP-TGIGVLYGKEELLEE-M- 221 (373)
T ss_pred eCcccccCCcCCHHHHHHHHHHcCC-EEEEEhhhhcCceeeeccccCCCEEEeccccccCC-CCcEEEEEchHHhhc-C-
Confidence 9999999999999999999999999 79999999999988888888999999999998555 889999999888775 2
Q ss_pred CCceeccCC-------C---CcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 012991 277 HPVVSHEFG-------N---GLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSL 346 (452)
Q Consensus 277 ~~~~~~~~~-------~---~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~ 346 (452)
.+....... . ......+..+++++..++++.++++++.+. |.+.++++.+++++++.+.|.+++++++
T Consensus 222 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~--g~~~~~~~~~~~~~~l~~~l~~~~~~~~ 299 (373)
T cd06453 222 PPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKI--GMEAIAAHEHELTAYALERLSEIPGVRV 299 (373)
T ss_pred CCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHc--CHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 222110000 0 001112345788888889999999998865 8999999999999999999998878877
Q ss_pred CCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCH
Q 012991 347 GSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTL 426 (452)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~ 426 (452)
+.++....++++|.++ +.+..++.+.|.+ +||.+..++.+.. ..... ...++++|+|++.++|.
T Consensus 300 ~~~~~~~~~~~~~~~~-------~~~~~~i~~~l~~-~gi~i~~g~~~~~-------~~~~~-~~~~~~iRis~~~~~t~ 363 (373)
T cd06453 300 YGDAEDRAGVVSFNLE-------GIHPHDVATILDQ-YGIAVRAGHHCAQ-------PLMRR-LGVPGTVRASFGLYNTE 363 (373)
T ss_pred eCCccccCCeEEEEEC-------CcCHHHHHHHHHH-CCEEeccCccchh-------HHHHH-hCCCCeEEEEecCCCCH
Confidence 6544334678888875 3467789999866 5999875543210 00000 11257999999999999
Q ss_pred HHHHHHHHHH
Q 012991 427 EDYEKFRDAV 436 (452)
Q Consensus 427 ~di~~l~~~l 436 (452)
+|+|+++++|
T Consensus 364 ~di~~~~~~l 373 (373)
T cd06453 364 EEIDALVEAL 373 (373)
T ss_pred HHHHHHHhhC
Confidence 9999999875
No 18
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=100.00 E-value=2.6e-38 Score=313.67 Aligned_cols=366 Identities=17% Similarity=0.169 Sum_probs=280.2
Q ss_pred eEEeccCCCCCCcHHHHHHHHHHHHHHhcCCchh---hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHH
Q 012991 40 VARINNGSFGSCPKSVLADQQKWQLKFLQQPDDF---YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQ 116 (452)
Q Consensus 40 ~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~ 116 (452)
.+|||++++++.|+.|++++..++.....++... ......+.++++++.+++++|++ +++|+||+|+|+++++++.
T Consensus 4 ~~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~-~~~v~~~~g~t~a~~~~l~ 82 (402)
T TIGR02006 4 PIYLDYAATTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGAD-SREIVFTSGATESNNLAIK 82 (402)
T ss_pred cEEeeCCcCCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCC-CCeEEEeCCHHHHHHHHHH
Confidence 5899999999999999999988876555666532 22334567899999999999996 7899999999999999988
Q ss_pred HhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEE
Q 012991 117 QIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAI 195 (452)
Q Consensus 117 ~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~ 195 (452)
++... ..++|++|+++.++|+++...+..+ +..|++++.+++ +.++.+ ++++++.+ .+++++|+
T Consensus 83 ~l~~~----~~~~g~~Vi~~~~~h~s~~~~~~~~-~~~g~~v~~v~~----~~~~~~d~~~l~~~l------~~~~~lv~ 147 (402)
T TIGR02006 83 GIAHF----YKSKGNHIITSKTEHKAVLDTCRYL-EREGFEVTYLPP----KSNGLIDLEELKAAI------RDDTILVS 147 (402)
T ss_pred HHHHh----hcCCCCEEEECCCccHHHHHHHHHH-HhcCCEEEEEcc----CCCCcCCHHHHHHhc------CCCCEEEE
Confidence 76321 1367899999999999998888764 567999999954 334445 88999988 56789999
Q ss_pred EeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCccccCC
Q 012991 196 IDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDM 275 (452)
Q Consensus 196 ~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l 275 (452)
+++++|+||.+.|+++|.++|+++|+ ++++|++|+.|..++++..+++|++++|+||+ +||.|+|+++++++....
T Consensus 148 v~~~~n~tG~~~~~~~I~~l~~~~g~-~livD~a~a~g~~~~~~~~~~~D~~~~s~~K~-~gp~G~G~l~~~~~~~~~-- 223 (402)
T TIGR02006 148 IMHVNNEIGVIQDIAAIGEICRERKV-FFHVDAAQSVGKIPINVNELKVDLMSISGHKI-YGPKGIGALYVRRKPRVR-- 223 (402)
T ss_pred EECCCcCceecccHHHHHHHHHHcCC-EEEEEcchhcCCcccCccccCCCEEEEehhhh-cCCCceEEEEEccCCCCC--
Confidence 99999999999999999999999999 79999999999999999988999999999995 889999999999876654
Q ss_pred CCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccc-c
Q 012991 276 HHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEIC-A 354 (452)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~ 354 (452)
..+.. .+++. ...+..|+++...++++..+++++.+ +.+.+.++.+++++++.+.|.+++++.+..+...+ .
T Consensus 224 ~~~~~---~g~~~-~~~~~~gt~~~~~~~al~~al~~~~~---~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p 296 (402)
T TIGR02006 224 LEALI---HGGGH-ERGMRSGTLPTHQIVGMGEAFRIAKE---EMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVP 296 (402)
T ss_pred CCcee---cCCCc-cCCccCCCccHHHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCC
Confidence 23322 22111 22345689999999999999998875 68888999999999999999888777665443222 2
Q ss_pred ceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCC----CccceEEecccccCCHHHHH
Q 012991 355 AMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDG----IITGYARISHQVYNTLEDYE 430 (452)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~iRis~~~~~t~~di~ 430 (452)
.++.+.++ ..+...+...| .+|.++.+..+...... .....+..+ ...+++|+|++.+||.+||+
T Consensus 297 ~~~~v~f~-------~~~~~~~~~~l---~~i~v~~G~~c~~~~~~-~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid 365 (402)
T TIGR02006 297 GNLNVSFN-------YVEGESLIMAL---KDLAVSSGSACTSASLE-PSYVLRALGINDELAHSSIRFTIGRFTTEEEID 365 (402)
T ss_pred CeEEEEEe-------CcCHHHHHHhc---CCEEEechhhcCCCCCC-ccHHHHHcCCChhhcCceEEEEecCCCCHHHHH
Confidence 33334333 22345565555 28888776665321100 000000111 23579999999999999999
Q ss_pred HHHHHHHHHHhcc
Q 012991 431 KFRDAVILLVEEG 443 (452)
Q Consensus 431 ~l~~~l~~~~~~~ 443 (452)
+++++|+++++.-
T Consensus 366 ~l~~~l~~~~~~~ 378 (402)
T TIGR02006 366 YAVKLVKSAIDKL 378 (402)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988653
No 19
>PRK02948 cysteine desulfurase; Provisional
Probab=100.00 E-value=4.7e-38 Score=310.25 Aligned_cols=364 Identities=14% Similarity=0.151 Sum_probs=278.5
Q ss_pred eEEeccCCCCCCcHHHHHHHHHHHHHHhcCCchh--hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHH
Q 012991 40 VARINNGSFGSCPKSVLADQQKWQLKFLQQPDDF--YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQ 117 (452)
Q Consensus 40 ~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~ 117 (452)
++|||+++.++.|+.|.+++.+++....++++.. .+......++++|+.+++++|++ +++|++++|+|+++..++.+
T Consensus 1 ~~yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~-~~~i~~~~g~t~a~~~~~~~ 79 (381)
T PRK02948 1 MIYLDYAATTPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGE-EQGIYFTSGGTESNYLAIQS 79 (381)
T ss_pred CEeccCCCCCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCC-CCeEEEeCcHHHHHHHHHHH
Confidence 4899999999999999999998887665555432 23455678899999999999996 78999999999999998887
Q ss_pred hhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEE
Q 012991 118 IGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAII 196 (452)
Q Consensus 118 l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~ 196 (452)
+.+.+ .++|++|+++..+|+++...+.. ++..|++++.+++ +.++.+ ++++++.+ .+++++|++
T Consensus 80 ~~~~~----~~~g~~vv~~~~~h~s~~~~~~~-~~~~g~~v~~v~~----~~~~~~d~~~l~~~l------~~~~~lv~~ 144 (381)
T PRK02948 80 LLNAL----PQNKKHIITTPMEHASIHSYFQS-LESQGYTVTEIPV----DKSGLIRLVDLERAI------TPDTVLASI 144 (381)
T ss_pred HHHhc----cCCCCEEEECCcccHHHHHHHHH-HHhCCCEEEEEee----CCCCCCCHHHHHHhc------CCCCEEEEE
Confidence 74321 25789999999999998888776 4778999999954 333444 89999888 467899999
Q ss_pred eccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCccccCCC
Q 012991 197 DHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMH 276 (452)
Q Consensus 197 ~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~ 276 (452)
++++|+||.+.|+++|.++|+++|+ ++++|+++++|..++++..+++|++++|+||+ +||+|+|+++++++....
T Consensus 145 ~~~~n~tG~~~~~~~I~~l~~~~~~-~vivD~~~~~g~~~~~~~~~~~d~~~~s~~K~-~gp~G~G~l~~~~~~~~~--- 219 (381)
T PRK02948 145 QHANSEIGTIQPIAEIGALLKKYNV-LFHSDCVQTFGKLPIDVFEMGIDSLSVSAHKI-YGPKGVGAVYINPQVRWK--- 219 (381)
T ss_pred ECCcCCcEeehhHHHHHHHHHHcCC-EEEEEChhhccccccCcccCCCCEEEecHHhc-CCCCcEEEEEEcCCCCCC---
Confidence 9999999999999999999999999 79999999999999998888999999999995 889999999998875221
Q ss_pred CCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCC--cc-cc
Q 012991 277 HPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSP--PE-IC 353 (452)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~-~~ 353 (452)
+.. .+. .....+..++++...++++.++++...+ +.++++++++++++++.+.|.++ ++++... .. ..
T Consensus 220 -~~~---~~~-~~~~~~~~~t~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~~~l~~~L~~~-~~~v~~~~~~~~~~ 290 (381)
T PRK02948 220 -PVF---PGT-THEKGFRPGTVNVPGIAAFLTAAENILK---NMQEESLRFKELRSYFLEQIQTL-PLPIEVEGHSTSCL 290 (381)
T ss_pred -Ccc---cCC-CCCCCcCCCCccHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhcC-CCCEEEeCCCccCc
Confidence 111 010 0112334588999999999999988754 57888999999999999999887 5543321 11 12
Q ss_pred cceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCC----CCccceEEecccccCCHHHH
Q 012991 354 AAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKD----GIITGYARISHQVYNTLEDY 429 (452)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~iRis~~~~~t~~di 429 (452)
..++.|.++ +.++.++...|.+ +||.++.+..|...- ..+....... ....+++|+|++.+||++|+
T Consensus 291 ~~i~~~~~~-------~~~~~~~~~~l~~-~gI~v~~g~~c~~~~-~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di 361 (381)
T PRK02948 291 PHIIGVTIK-------GIEGQYTMLECNR-RGIAISTGSACQVGK-QEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQI 361 (381)
T ss_pred CCEEEEEeC-------CCCHHHHHHhccc-CCEEEEchHhcCCCC-CCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHH
Confidence 345666654 3456778888855 599998766542100 0000000000 01247999999999999999
Q ss_pred HHHHHHHHHHHhc
Q 012991 430 EKFRDAVILLVEE 442 (452)
Q Consensus 430 ~~l~~~l~~~~~~ 442 (452)
++++++|+++++.
T Consensus 362 ~~l~~~l~~~~~~ 374 (381)
T PRK02948 362 DTTIHALETIGNQ 374 (381)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998764
No 20
>PLN02409 serine--glyoxylate aminotransaminase
Probab=100.00 E-value=2.8e-37 Score=305.50 Aligned_cols=353 Identities=13% Similarity=0.137 Sum_probs=277.6
Q ss_pred eEEeccCCCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhh
Q 012991 40 VARINNGSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIG 119 (452)
Q Consensus 40 ~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~ 119 (452)
..+|.++++...|++|++++..... .+....+.+.++++++.+++++|.+..+.++++++||+++..++.++
T Consensus 9 ~~~l~~pGP~~~~~~V~~a~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~- 80 (401)
T PLN02409 9 RNHLFVPGPVNIPERVLRAMNRPNE-------DHRSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNT- 80 (401)
T ss_pred CceeccCCCCCCCHHHHHHhcCCCC-------CCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhc-
Confidence 3456677788888889999876431 12345667889999999999999963357888999999999888765
Q ss_pred cccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEec
Q 012991 120 RGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDH 198 (452)
Q Consensus 120 ~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~ 198 (452)
+++||+|+++++.|.+.. |..++++.|++++.++.++. ..+ ++++++.++... .+++++|+++|
T Consensus 81 -------~~~Gd~Vlv~~~~~~~~~--~~~~~~~~g~~v~~v~~~~~----~~~~~~~l~~~l~~~~--~~~~k~v~~~~ 145 (401)
T PLN02409 81 -------LSPGDKVVSFRIGQFSLL--WIDQMQRLNFDVDVVESPWG----QGADLDILKSKLRQDT--NHKIKAVCVVH 145 (401)
T ss_pred -------CCCCCEEEEeCCCchhHH--HHHHHHHcCCceEEEECCCC----CCCCHHHHHHHHhhCc--CCCccEEEEEe
Confidence 689999999999998753 55557888999999976421 123 788999885310 13799999999
Q ss_pred cCCCCcccccHHHHHHH--HHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCccccCCC
Q 012991 199 ITSMPCVVIPVRKLVKI--CRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMH 276 (452)
Q Consensus 199 ~~n~tG~~~~l~~i~~l--~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~ 276 (452)
++|+||.+.|+++|.++ |+++|+ ++++|++|++|..++++..+++|++++|+|||+++|+|+|+++++++.++. +.
T Consensus 146 ~~~~tG~~~~~~~i~~l~~~~~~g~-~~vvD~v~s~g~~~id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~-~~ 223 (401)
T PLN02409 146 NETSTGVTNDLAGVRKLLDCAQHPA-LLLVDGVSSIGALDFRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEA-SK 223 (401)
T ss_pred ecccccccCCHHHHHHHHhhhccCc-EEEEEcccccCCccccccccCccEEEEcCccccCcCCCcceeEECHHHHHH-Hh
Confidence 99999999999999999 999999 899999999999999999999999999999999999999999999887765 21
Q ss_pred CCc-eeccCCCCcc-----cccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCc
Q 012991 277 HPV-VSHEFGNGLP-----IESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPP 350 (452)
Q Consensus 277 ~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 350 (452)
... ....++.... ....+.+|++...++++.++++++.+. |.++++++.+++++++++.|.++ |+++..+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~--G~e~i~~~~~~l~~~l~~~L~~~-g~~~~~~~ 300 (401)
T PLN02409 224 TAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEE--GLENVIARHARLGEATRLAVEAW-GLKLCTKK 300 (401)
T ss_pred cCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHc-CCeeccCC
Confidence 100 0001110000 011224688888899999999998865 99999999999999999999886 88877653
Q ss_pred -cc-ccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHH
Q 012991 351 -EI-CAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLED 428 (452)
Q Consensus 351 -~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~d 428 (452)
.. ...++++.+| .+.++.++.+.|.+++||.+..+... ..++.+||+.+.+++.+|
T Consensus 301 ~~~~s~~v~~~~~p------~~~~~~~l~~~l~~~~~i~i~~G~~~----------------~~~~~~Rig~~g~~~~~~ 358 (401)
T PLN02409 301 PEWRSDTVTAVVVP------EGIDSAEIVKNAWKKYNLSLGLGLNK----------------VAGKVFRIGHLGNVNELQ 358 (401)
T ss_pred hhhcccceEEEeCC------CCCCHHHHHHHHHHhCCEEEEcCCCc----------------ccCCEEEEcCCCCCCHHH
Confidence 22 2356778777 46677789888877789999765542 245799999999999999
Q ss_pred HHHHHHHHHHHHhc
Q 012991 429 YEKFRDAVILLVEE 442 (452)
Q Consensus 429 i~~l~~~l~~~~~~ 442 (452)
+.+++++|++.+..
T Consensus 359 ~~~~~~~~~~~l~~ 372 (401)
T PLN02409 359 LLGALAGVEMVLKD 372 (401)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998864
No 21
>PRK14012 cysteine desulfurase; Provisional
Probab=100.00 E-value=1.7e-35 Score=293.82 Aligned_cols=364 Identities=16% Similarity=0.175 Sum_probs=270.8
Q ss_pred eEEeccCCCCCCcHHHHHHHHHHHH--HHhcCCchh---hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHH
Q 012991 40 VARINNGSFGSCPKSVLADQQKWQL--KFLQQPDDF---YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIV 114 (452)
Q Consensus 40 ~~~l~~~~~~~~p~~v~e~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~ 114 (452)
.+|||+++.++.|+.|.+++.+++. ....++... ......+.++++++.+++++|++ ++++++++|+|++++++
T Consensus 4 ~iyld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~-~~~v~~~~g~t~al~~~ 82 (404)
T PRK14012 4 PIYLDYSATTPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGAD-PREIVFTSGATESDNLA 82 (404)
T ss_pred eEEecCcCCCCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcC-cCeEEEeCCHHHHHHHH
Confidence 5899999999999999999988876 333444431 12223467899999999999996 68899999999999999
Q ss_pred HHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEE
Q 012991 115 LQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRL 193 (452)
Q Consensus 115 ~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~l 193 (452)
+.++.+. ..++||+|++++.+|+++...+..+ ...|++++.+++ +.++.+ ++++++++ ++++++
T Consensus 83 l~~l~~~----~~~~gd~Vi~~~~~~~s~~~~~~~~-~~~g~~~~~v~~----~~~g~~d~~~l~~~i------~~~t~l 147 (404)
T PRK14012 83 IKGAAHF----YQKKGKHIITSKTEHKAVLDTCRQL-EREGFEVTYLDP----QSNGIIDLEKLEAAM------RDDTIL 147 (404)
T ss_pred HHHHHHh----hcCCCCEEEEecCccHHHHHHHHHH-HhCCCEEEEEcc----CCCCcCCHHHHHHhc------CCCCEE
Confidence 8877421 1368999999999999998888764 556999999954 344555 89999999 578899
Q ss_pred EEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCcccc
Q 012991 194 AIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSS 273 (452)
Q Consensus 194 v~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~ 273 (452)
|++++++|+||.+.|+++|.++|+++|+ ++|+|++|+.|..+++...+++|++++|+|| ++||.|+|+++++++....
T Consensus 148 v~~~~~~n~tG~~~~~~~I~~la~~~g~-~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K-~~gp~g~G~l~~~~~~~~~ 225 (404)
T PRK14012 148 VSIMHVNNEIGVIQDIAAIGEICRERGI-IFHVDAAQSVGKVPIDLSKLKVDLMSFSAHK-IYGPKGIGALYVRRKPRVR 225 (404)
T ss_pred EEEECcCCCccchhhHHHHHHHHHHcCC-EEEEEcchhcCCcccCcccCCCCEEEEehhh-ccCCCceEEEEEecCCCCC
Confidence 9999999999999999999999999999 7999999999999988888899999999999 5888899999999876543
Q ss_pred CCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcc-c
Q 012991 274 DMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPE-I 352 (452)
Q Consensus 274 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~ 352 (452)
..+.. .|++. ...+..|+++...+.++.++++.... +.+.+.++.+++++++.+.|.+++++.+..+.. .
T Consensus 226 --~~~~~---~g~~~-~~~~~~gt~~~~~~~~l~~al~~~~~---~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~ 296 (404)
T PRK14012 226 --LEAQM---HGGGH-ERGMRSGTLPTHQIVGMGEAARIAKE---EMATENERIRALRDRLWNGIKDIEEVYLNGDLEQR 296 (404)
T ss_pred --CCcee---cCCCc-cCCccCCCcCHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCcccc
Confidence 22321 22221 11233577888788888888887764 567788899999999999998877766543321 1
Q ss_pred c--cceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCC----CCccceEEecccccCCH
Q 012991 353 C--AAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKD----GIITGYARISHQVYNTL 426 (452)
Q Consensus 353 ~--~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~iRis~~~~~t~ 426 (452)
. ...++|.+. +..++...|. ++.+..+..+.....+. ....... ....+.+|+|++.++|+
T Consensus 297 ~~~~~~~~~~~~---------~~~~~~~~l~---~~~i~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~iRls~~~~~t~ 363 (404)
T PRK14012 297 VPGNLNVSFNYV---------EGESLIMALK---DLAVSSGSACTSASLEP-SYVLRALGLNDELAHSSIRFSLGRFTTE 363 (404)
T ss_pred CCCEEEEEEeCc---------CHHHHHHhCC---CeEEEchhhhCCCCCCC-CHHHHHcCCChhhcCceEEEEecCCCCH
Confidence 1 224555543 2345767663 56555443332110000 0000000 12357999999999999
Q ss_pred HHHHHHHHHHHHHHhcc
Q 012991 427 EDYEKFRDAVILLVEEG 443 (452)
Q Consensus 427 ~di~~l~~~l~~~~~~~ 443 (452)
+||++++++|+++++.-
T Consensus 364 ~dvd~~~~~l~~~~~~~ 380 (404)
T PRK14012 364 EEIDYAIELVRKSIGKL 380 (404)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999988643
No 22
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=100.00 E-value=7.4e-35 Score=284.52 Aligned_cols=320 Identities=18% Similarity=0.259 Sum_probs=255.9
Q ss_pred EeccCCCCCCcHHHHHHHHHHHHHHhcCCchh---hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHh
Q 012991 42 RINNGSFGSCPKSVLADQQKWQLKFLQQPDDF---YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQI 118 (452)
Q Consensus 42 ~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l 118 (452)
|||+++.++.|+.|.+++.+++.....+++.. +.....+.++++++.+++++|++ +++|++|+|+|++++.++.++
T Consensus 1 yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~-~~~v~~~~g~t~a~~~~l~~l 79 (353)
T TIGR03235 1 YLDHNATTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGAD-TEEVIFTSGATESNNLAILGL 79 (353)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCC-CCeEEEeCCHHHHHHHHHHHH
Confidence 79999999999999999999886555565542 23345577899999999999996 789999999999999998877
Q ss_pred hcccccCCCCCC-CEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEE
Q 012991 119 GRGFTEGRFHRN-DTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAII 196 (452)
Q Consensus 119 ~~~~~~~~~~~g-~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~ 196 (452)
... ...+| ++|+++..+|+++...+..+ +..|++++.+++ +.++.+ ++++++.+ .+++++|++
T Consensus 80 ~~~----~~~~g~~~vi~~~~~~~s~~~~~~~~-~~~G~~v~~v~~----~~~~~~d~~~l~~~l------~~~~~lv~~ 144 (353)
T TIGR03235 80 ARA----GEQKGKKHIITSAIEHPAVLEPIRAL-ERNGFTVTYLPV----DESGRIDVDELADAI------RPDTLLVSI 144 (353)
T ss_pred HHh----cccCCCCeeeEcccccHHHHHHHHHH-HhcCCEEEEEcc----CCCCcCCHHHHHHhC------CCCCEEEEE
Confidence 321 01345 78999999999998888774 667999999954 333444 89999988 567899999
Q ss_pred eccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCccccCCC
Q 012991 197 DHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMH 276 (452)
Q Consensus 197 ~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~ 276 (452)
++++|+||.+.|+++|.++|+++|+ ++++|++|+.|..++++..+++|++++|+||| +||.|+|+++++++.......
T Consensus 145 ~~~~n~tG~~~~~~~I~~l~~~~~~-~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~-~gp~g~g~l~~~~~~~~~~~~ 222 (353)
T TIGR03235 145 MHVNNETGSIQPIREIAEVLEAHEA-FFHVDAAQVVGKITVDLSADRIDLISCSGHKI-YGPKGIGALVIRKRGKPKAPL 222 (353)
T ss_pred EcccCCceeccCHHHHHHHHHHcCC-EEEEEchhhcCCccccccccCCCEEEeehhhc-CCCCceEEEEEccCccccccc
Confidence 9999999999999999999999999 79999999999999999988999999999997 799999999999886532011
Q ss_pred CCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcc-cccc
Q 012991 277 HPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPE-ICAA 355 (452)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~ 355 (452)
.+.. ++.+. ...+..++++...++++.++++++.. +.+.+.++++++++++++.|.+ +|+++..++. ....
T Consensus 223 ~~~~---~~~~~-~~~~~~gt~~~~~~~al~~al~~~~~---~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~ 294 (353)
T TIGR03235 223 KPIM---FGGGQ-ERGLRPGTLPVHLIVGMGEAAEIARR---NAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPAETIPH 294 (353)
T ss_pred Ccee---eCCCC-cCccccCCCChHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcccccCC
Confidence 2221 21111 23345689999999999999998764 8899999999999999999987 6888765443 3356
Q ss_pred eEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCC
Q 012991 356 MVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPK 396 (452)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~ 396 (452)
++.|.++ +.+..++.+.|. + +|.+..+..|..
T Consensus 295 i~~~~~~-------~~~~~~v~~~L~-~-~i~v~~g~~~~~ 326 (353)
T TIGR03235 295 ILNFSID-------GVNSEALIVNLR-A-DAAVSTGSACSS 326 (353)
T ss_pred EEEEEeC-------CcCHHHHHHHHh-C-CeEEEchhhcCC
Confidence 7888775 456778999994 4 899987776643
No 23
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=100.00 E-value=3e-35 Score=287.74 Aligned_cols=343 Identities=17% Similarity=0.167 Sum_probs=259.3
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccC
Q 012991 46 GSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEG 125 (452)
Q Consensus 46 ~~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~ 125 (452)
+++.+.|+.+.+++..... ........+..+++++.+++++|++..+.+++++|+|+|+.+++.++
T Consensus 5 ~~~~~~~~~v~~a~~~~~~-------~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~------- 70 (356)
T cd06451 5 PGPSNVPPRVLKAMNRPML-------GHRSPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNL------- 70 (356)
T ss_pred CCCcCCCHHHHHHhCCCcc-------CCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHh-------
Confidence 4566777779999865321 11223345678999999999999953456788999999999999876
Q ss_pred CCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCc
Q 012991 126 RFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPC 204 (452)
Q Consensus 126 ~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG 204 (452)
+++|++|+++.+.|++.. +...++..|.+++.++. +.++.+ ++++++.++ .+++++|++++++|++|
T Consensus 71 -~~~g~~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~----~~~~~~~~~~l~~~i~-----~~~~~~v~i~~~~~~~G 138 (356)
T cd06451 71 -LEPGDKVLVGVNGVFGDR--WADMAERYGADVDVVEK----PWGEAVSPEEIAEALE-----QHDIKAVTLTHNETSTG 138 (356)
T ss_pred -CCCCCEEEEecCCchhHH--HHHHHHHhCCCeEEeec----CCCCCCCHHHHHHHHh-----ccCCCEEEEeccCCCcc
Confidence 478999999988887632 33335777999999964 322334 899999984 23889999999999999
Q ss_pred ccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCccccCCCC--Cceec
Q 012991 205 VVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMHH--PVVSH 282 (452)
Q Consensus 205 ~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~~--~~~~~ 282 (452)
.+.|+++|.++|+++|+ ++++|++|++|..++++...++|++++|+|||+++|.|+|+++++++++.. +.. ....+
T Consensus 139 ~~~~~~~i~~~a~~~~~-~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~-~~~~~~~~~~ 216 (356)
T cd06451 139 VLNPLEGIGALAKKHDA-LLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKALGAPPGLGPIAFSERALER-IKKKTKPKGF 216 (356)
T ss_pred cccCHHHHHHHHHhcCC-EEEEeeehhccCccccccccCccEEEecCchhccCCCCcceeEECHHHHHH-HHhcCCCCce
Confidence 99999999999999999 799999999998888887778999999999999999999999999887654 211 11111
Q ss_pred cCC-----CCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccc-cce
Q 012991 283 EFG-----NGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEIC-AAM 356 (452)
Q Consensus 283 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~~ 356 (452)
.+. ........+.++++...++++.++++++... |.+.+.++..++++++.+.|.+. ++.+..++... ..+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~ 293 (356)
T cd06451 217 YFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEE--GLENRWARHRRLAKALREGLEAL-GLKLLAKPELRSPTV 293 (356)
T ss_pred eecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCCce
Confidence 000 0000111345677777788888999988864 88999999999999999999987 77776543322 334
Q ss_pred EEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHH
Q 012991 357 VMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAV 436 (452)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 436 (452)
+++.++ .+.+..++++.|.+++||.+..+..+ ..++++|+|++.++|++||++++++|
T Consensus 294 ~~~~~~------~~~~~~~~~~~L~~~~gI~~~~g~~~----------------~~~~~iRis~~~~~~~e~v~~~~~~l 351 (356)
T cd06451 294 TAVLVP------EGVDGDEVVRRLMKRYNIEIAGGLGP----------------TAGKVFRIGHMGEATREDVLGVLSAL 351 (356)
T ss_pred EEEECC------CCCCHHHHHHHHHHhCCEEEeccccc----------------ccCCEEEEecCCCCCHHHHHHHHHHH
Confidence 456655 24567889999977559999765432 23469999999999999999999999
Q ss_pred HHHHh
Q 012991 437 ILLVE 441 (452)
Q Consensus 437 ~~~~~ 441 (452)
+++++
T Consensus 352 ~~~~~ 356 (356)
T cd06451 352 EEALK 356 (356)
T ss_pred HHHhC
Confidence 98763
No 24
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=100.00 E-value=5.7e-34 Score=279.32 Aligned_cols=344 Identities=16% Similarity=0.146 Sum_probs=252.0
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCC-CCcEEEecChhHHHHHHHHHhhcccc
Q 012991 45 NGSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADD-VGEISLVDNATTAAAIVLQQIGRGFT 123 (452)
Q Consensus 45 ~~~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~-~~~i~~t~g~t~a~~~~~~~l~~~~~ 123 (452)
.+++...++.|.+++.... . ++...+.+.++++++.+++++|+++ .+.|++|+|||++++.++.++
T Consensus 8 ~pgp~~~~~~v~~~~~~~~----~----~~~~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l----- 74 (363)
T TIGR02326 8 TPGPLTTSRTVKEAMLFDW----C----TWDSDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSA----- 74 (363)
T ss_pred cCCCCCCCHHHHHHhCCCC----C----CCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhc-----
Confidence 3445556666777665432 1 1234567789999999999999962 247999999999999999987
Q ss_pred cCCCCCCCEEEE-eCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCC
Q 012991 124 EGRFHRNDTVLM-LHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITS 201 (452)
Q Consensus 124 ~~~~~~g~~Vl~-~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n 201 (452)
+.+++++++ ....|++. +..++++.|.+++.++++ .++.+ ++++++.+++ ..++++|.+++++|
T Consensus 75 ---~~~~~~vlv~~~~~~~~~---~~~~a~~~g~~~~~v~~~----~~~~~d~~~l~~~l~~----~~~~~~v~~~~~~~ 140 (363)
T TIGR02326 75 ---VPKDGKLLVVINGAYGAR---IVQIAEYLGIPHHVVDTG----EVEPPDVVEVEAILAA----DPAITHIALVHCET 140 (363)
T ss_pred ---CCCCCeEEEEeCChhhHH---HHHHHHHcCCceEEEeCC----CCCCCCHHHHHHHHhh----CCCccEEEEEeecC
Confidence 366776655 45555442 334467789999999652 23334 8899998864 34677899999999
Q ss_pred CCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCccccCCCCCcee
Q 012991 202 MPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMHHPVVS 281 (452)
Q Consensus 202 ~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~~~~~~ 281 (452)
+||...|+++|.++|+++|+ ++++|++|++|..++++..+++|++++|+|||++||+|+|+++++++.++. +......
T Consensus 141 ~tG~~~~i~~I~~l~~~~g~-~livD~~~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~-~~~~~~~ 218 (363)
T TIGR02326 141 TTGILNPIEAVAKLAHRHGK-VTIVDAMSSFGGIPIDIAELHIDYLISSANKCIQGVPGFGFVIARQAELAA-CKGNARS 218 (363)
T ss_pred CccccCcHHHHHHHHHHcCC-EEEEEccccccCcccchhhcCccEEEecCccccccCCcceEEEECHHHHHH-hhcCCCc
Confidence 99999999999999999999 899999999999999999999999999999999999999999999887764 2111100
Q ss_pred ccCCCC-----cc-cccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCccccc-
Q 012991 282 HEFGNG-----LP-IESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICA- 354 (452)
Q Consensus 282 ~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~- 354 (452)
...... .. .......+++...++++.++++.+.. .+|++++.++++++++++++.|.++ |+.+..++...+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~-~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~ 296 (363)
T TIGR02326 219 LSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEK-EGGVAARHQRYQQNQKTLVAGMRAL-GFEPLLDDEIQSP 296 (363)
T ss_pred eeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCc
Confidence 000000 00 00011235677788888888988764 2368999999999999999999887 777665443224
Q ss_pred ceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHH
Q 012991 355 AMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRD 434 (452)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~ 434 (452)
.+.+|.+++. ...+..++.+.|.++ ||.+..+..+ ..+++|++++.+++.+|++++++
T Consensus 297 ~~~~~~~~~~----~~~~~~~v~~~L~~~-gi~v~~g~~~-----------------~~~~iRi~~~~~~~~edv~~~l~ 354 (363)
T TIGR02326 297 IITSFYSPED----PDYRFADFYQRLKEQ-GFVIYPGKVS-----------------QVDCFRIGNIGEVDAADITRLLT 354 (363)
T ss_pred eEEEEECCCC----CCCCHHHHHHHHHHC-CEEEECCcCC-----------------CCCEEEEecCCCCCHHHHHHHHH
Confidence 3467777620 024567888999765 9999654321 23689999988899999999999
Q ss_pred HHHHHHh
Q 012991 435 AVILLVE 441 (452)
Q Consensus 435 ~l~~~~~ 441 (452)
+|++++.
T Consensus 355 ~l~~~l~ 361 (363)
T TIGR02326 355 AIGKAMY 361 (363)
T ss_pred HHHHHhC
Confidence 9998763
No 25
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-33 Score=265.76 Aligned_cols=350 Identities=17% Similarity=0.207 Sum_probs=280.6
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhc
Q 012991 41 ARINNGSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGR 120 (452)
Q Consensus 41 ~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~ 120 (452)
+.|. +++...++.|+++|..-. ..+++..+...+.++.+.+...++.+..+.++++++||.+++.++.++
T Consensus 7 ~Ll~-PGP~~v~~~V~~am~~~~-------~~h~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl-- 76 (383)
T COG0075 7 LLLT-PGPVPVPPRVLLAMARPM-------VGHRSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASL-- 76 (383)
T ss_pred eeee-CCCCCCCHHHHHHhcCCC-------CCCCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhc--
Confidence 3444 456666677998887643 224567788999999999999999973456677889999999999987
Q ss_pred ccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEecc
Q 012991 121 GFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHI 199 (452)
Q Consensus 121 ~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~ 199 (452)
+.|||+|++......+ ..|..++++.|.+++.+..+|. ..+ ++++++++++ ++++++|.++|.
T Consensus 77 ------~~pgdkVLv~~nG~FG--~R~~~ia~~~g~~v~~~~~~wg----~~v~p~~v~~~L~~----~~~~~~V~~vH~ 140 (383)
T COG0075 77 ------VEPGDKVLVVVNGKFG--ERFAEIAERYGAEVVVLEVEWG----EAVDPEEVEEALDK----DPDIKAVAVVHN 140 (383)
T ss_pred ------cCCCCeEEEEeCChHH--HHHHHHHHHhCCceEEEeCCCC----CCCCHHHHHHHHhc----CCCccEEEEEec
Confidence 6899999998766544 5677779999999999976543 223 8999999975 578899999999
Q ss_pred CCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCccccCCCCCc
Q 012991 200 TSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMHHPV 279 (452)
Q Consensus 200 ~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~~~~ 279 (452)
.++||+..|+++|+++|++||. ++|||++.++|..+++++.|++|+++.+.+|+|.+|+|+|++.++++..+. +....
T Consensus 141 ETSTGvlnpl~~I~~~~k~~g~-l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~-~~~~~ 218 (383)
T COG0075 141 ETSTGVLNPLKEIAKAAKEHGA-LLIVDAVSSLGGEPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEA-IEERK 218 (383)
T ss_pred cCcccccCcHHHHHHHHHHcCC-EEEEEecccCCCcccchhhcCccEEEecCchhccCCCccceeEECHHHHHH-HhcCC
Confidence 9999999999999999999999 999999999999999999999999999999999999999999999877765 21111
Q ss_pred ee-ccCCCCc---cc-c-cccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcc-c
Q 012991 280 VS-HEFGNGL---PI-E-SAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPE-I 352 (452)
Q Consensus 280 ~~-~~~~~~~---~~-~-~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~ 352 (452)
.. +.+.... .. + ..++.||+...++++..+++.+.+. |+++..+|.+.+.+++++++.++ |+++...+. .
T Consensus 219 ~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~E--Gle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~ 295 (383)
T COG0075 219 HPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEE--GLEARIARHRRLAEALRAGLEAL-GLELFADPERR 295 (383)
T ss_pred CCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHc-CCccccCcccC
Confidence 00 1111100 01 1 4677899999999999999999964 99999999999999999999988 888766443 3
Q ss_pred ccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHH
Q 012991 353 CAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKF 432 (452)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l 432 (452)
...+..+.+| .+.+..++...+++++|+.+..+..+ ..+..+||+.+.+-+.+|+..+
T Consensus 296 s~tvta~~~P------~g~~~~~~~~~~~~~~g~~i~gg~~~----------------l~gkifRIGhMG~~~~~dv~~~ 353 (383)
T COG0075 296 SPTVTAIKVP------EGVDDKKVRRALLKEYGVEIAGGQGP----------------LKGKIFRIGHMGNVRPEDVLAA 353 (383)
T ss_pred CCceEEEECC------CCCCcHHHHHHHHHhCCEEecccccc----------------cCccEEEEecCccCCHHHHHHH
Confidence 3567778888 45555555556777789998655543 4467999999988899999999
Q ss_pred HHHHHHHHhcc
Q 012991 433 RDAVILLVEEG 443 (452)
Q Consensus 433 ~~~l~~~~~~~ 443 (452)
+.+|..++.+-
T Consensus 354 l~ale~~L~~~ 364 (383)
T COG0075 354 LAALEAALREL 364 (383)
T ss_pred HHHHHHHHHHc
Confidence 99999998653
No 26
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=100.00 E-value=7.6e-34 Score=278.61 Aligned_cols=348 Identities=13% Similarity=0.068 Sum_probs=251.7
Q ss_pred CCCCeEEeccCCCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEec-ChhHHHHHH
Q 012991 36 HQHGVARINNGSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVD-NATTAAAIV 114 (452)
Q Consensus 36 ~~~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~-g~t~a~~~~ 114 (452)
+.+..+||++|+.+..|..|++++...... ..+.+..+.+.++++|+.+++++++++.++|+|++ |||.+++.+
T Consensus 9 ~~~~~~~f~~Gp~~~~~~~v~~a~~~~~~~-----~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~ 83 (378)
T PRK03080 9 LRPADPRFSSGPCKKRPGWQLEALADALLG-----RSHRQKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMA 83 (378)
T ss_pred cCCCCCCcCCCCcCCChHHHHHHHHhhhcc-----cCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHH
Confidence 335567899888888888899999865321 11334567889999999999999986456898885 899999999
Q ss_pred HHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCc-EEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceE
Q 012991 115 LQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGG-SVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIR 192 (452)
Q Consensus 115 ~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~ 192 (452)
+.++ +++++.+++...+|++.... .++++.|+ +++.++.++. +.+ +++ + .. ++
T Consensus 84 ~~~l--------~~~~~~~vi~~g~f~~~~~~--~~~~~~g~~~v~~~~~~~g----~~~d~~~----i------~~-~~ 138 (378)
T PRK03080 84 LWSL--------LGARRVDHLAWESFGSKWAT--DVVKQLKLEDPRVLEADYG----SLPDLSA----V------DF-DR 138 (378)
T ss_pred HHhc--------CCCCcceEEEeCHHHHHHHH--HHHhhcCCCCceEeccCCC----CCCCHhh----c------CC-CC
Confidence 9987 34433334446788774322 22466788 8888865321 111 332 3 12 56
Q ss_pred EEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCccc
Q 012991 193 LAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILS 272 (452)
Q Consensus 193 lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~ 272 (452)
+|.++|.+|.||.+.|+++|++ |++|+ +++||++|++|+.++|+.. +|++++|+|||+++|+|+|+++++++.++
T Consensus 139 ~V~~~h~~t~tG~~~pi~~I~~--~~~g~-~~vVDa~qs~G~~pidv~~--iD~~~~s~~K~l~~P~G~g~l~v~~~~~~ 213 (378)
T PRK03080 139 DVVFTWNGTTTGVRVPVARWIG--ADREG-LTICDATSAAFALPLDWSK--LDVYTFSWQKVLGGEGGHGMAILSPRAVE 213 (378)
T ss_pred CEEEEecCCccceeccchhhcc--ccCCC-eEEEecccccccCCCCHHH--CcEEEEehhhhCCCCCceEEEEECHHHHH
Confidence 7999999999999999999999 88999 8999999999999999986 69999999999999999999999998886
Q ss_pred cCCCCCce-ec--------cCCCCcc---cccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHH
Q 012991 273 SDMHHPVV-SH--------EFGNGLP---IESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLAN 340 (452)
Q Consensus 273 ~~l~~~~~-~~--------~~~~~~~---~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~ 340 (452)
. + .+.. .+ ..+.... ......+++++..++++.++++++.+. +|++++.++.+++++++++.|++
T Consensus 214 ~-~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~-gG~e~i~~r~~~l~~~l~~~l~~ 290 (378)
T PRK03080 214 R-L-ESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSI-GGLDALIARTAANASVLYDWAEK 290 (378)
T ss_pred h-h-hcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHHHHh
Confidence 5 2 2221 00 0000000 111223567777778889999999862 48999999999999999999999
Q ss_pred HcCCCcCCC-cccc-cceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEe
Q 012991 341 AWGTSLGSP-PEIC-AAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARI 418 (452)
Q Consensus 341 ~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRi 418 (452)
++++.+..+ +..+ ..++.|.+++. ..+.+. ++...|.++ ||.+..+... ..++.+|+
T Consensus 291 ~~~~~~~~~~~~~~s~~i~~~~~~~~---~~~~~~-~~~~~l~~~-~i~v~~g~~~----------------~~~~~vRi 349 (378)
T PRK03080 291 TPWATPLVADPATRSNTSVTLDFVDA---QAAVDA-AAVAKLLRE-NGAVDIEPYR----------------DAPNGLRI 349 (378)
T ss_pred CCCcccccCCccccCccEEEEEcCCc---hHHHHH-HHHHHHHHc-CCeecccccc----------------CCCCcEEE
Confidence 866666542 2222 35788887620 002333 355566565 8877543221 12468999
Q ss_pred cccccCCHHHHHHHHHHHHHHHhc
Q 012991 419 SHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 419 s~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
|++.|+|.+||++++++|+++++.
T Consensus 350 s~~~~~t~~di~~l~~al~~~~~~ 373 (378)
T PRK03080 350 WCGPTVEPADVEALTPWLDWAFER 373 (378)
T ss_pred ecCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998764
No 27
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=100.00 E-value=2.7e-33 Score=275.64 Aligned_cols=379 Identities=13% Similarity=0.016 Sum_probs=267.4
Q ss_pred CCCCCCCCHHHHHhhhccCCCCeEEeccCC--------CCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHH
Q 012991 18 PKLTRCISEAEIRDEFSHHQHGVARINNGS--------FGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAV 89 (452)
Q Consensus 18 ~~~~~~~~~~~ir~~~~~~~~~~~~l~~~~--------~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 89 (452)
+-|......+++-+++.. .+|+++.. +++..+.+.+.+...+.....+|+.. +.. .++.+++++++
T Consensus 16 ~~p~~~~~~~~~~~~~~~----~iyld~~a~~~~~~~~tt~~~p~~~~~~~~~l~~~~~np~s~-~~~-~~le~~~~~~l 89 (431)
T TIGR01788 16 RMPEEEMPPDAAYQLIHD----ELSLDGNPRLNLATFVTTWMEPEARKLMDETINKNMIDKDEY-PQT-AEIENRCVNML 89 (431)
T ss_pred cCCCCCCCHHHHHHHHHH----HhhhcCCcceeeeeeeCCCCCHHHHHHHHHHHhcCCCCcccC-ccH-HHHHHHHHHHH
Confidence 334456677777777752 44666665 55555558888888876555566553 333 38899999999
Q ss_pred HhHhCCCCC-CcEEE--ecChhHHHHHHHHHhhccccc-----CCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEE
Q 012991 90 KDLINADDV-GEISL--VDNATTAAAIVLQQIGRGFTE-----GRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEV 161 (452)
Q Consensus 90 a~~~~~~~~-~~i~~--t~g~t~a~~~~~~~l~~~~~~-----~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~ 161 (452)
++++|++.+ +++.+ |+|||+|+++++.+....+.. .....+.+|+++..+|+|+.++... .|++++.+
T Consensus 90 a~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~----lg~~v~~i 165 (431)
T TIGR01788 90 ADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARY----FDVELREV 165 (431)
T ss_pred HHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHH----cCceeEEE
Confidence 999999622 34544 899999999998776422100 0001124799999999998777544 58999999
Q ss_pred eCCCCCCCh-HHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHc------CCCEEEEecccc--
Q 012991 162 QLPFPLASE-EEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDE------GVDQVFVDAAHA-- 231 (452)
Q Consensus 162 ~~~~~~~~~-~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~------~~~~~ivD~a~~-- 231 (452)
++ +.. +.+ +++|+++| .++|.+|++++.+|.+|.+.|+++|+++|+++ |+ ++|+|++|+
T Consensus 166 ~~----d~~~~~vd~~~L~~~i------~~~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~-~~HvDaaq~g~ 234 (431)
T TIGR01788 166 PM----DPGRYVIDPEQVVEAV------DENTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDI-PIHVDAASGGF 234 (431)
T ss_pred ec----CCCceeeCHHHHHHHH------hhCCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCc-eEEEecccHHH
Confidence 54 443 355 99999999 46789999999999999999999999999999 99 699999999
Q ss_pred -----cCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCc-c-ccCC--CCCceeccCCCCcccccccccccCccc
Q 012991 232 -----MGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSI-L-SSDM--HHPVVSHEFGNGLPIESAWIGTRDYSA 302 (452)
Q Consensus 232 -----~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~-~-~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (452)
.+..++++...++|++++|+|||+++|.|+|+++++++. + .. + ..++ .++.. ......++.+...
T Consensus 235 ~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~-~~~~~~y----l~~~~-~~~t~~~sR~g~~ 308 (431)
T TIGR01788 235 IAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEE-LIFHVNY----LGGDE-PTFTLNFSRPANQ 308 (431)
T ss_pred HHHHhCCCchhhcCCCCceEEEECchhccCCCCCcEEEEEeChHHcchh-heecccc----cCCCC-CCcceecCchHHH
Confidence 455566666668899999999997799999999998752 2 21 1 1112 12111 1111122333223
Q ss_pred cccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhh
Q 012991 303 QLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRV 382 (452)
Q Consensus 303 ~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 382 (452)
.++.+..+..+... |++++.++..++++++.+.|.+.+++++..+.. ..++++|.++... ..+.+..++.+.|.+
T Consensus 309 al~~w~~l~~lG~~--G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~-~~~iV~Fr~~~~~--~~~~~~~~l~~~L~~ 383 (431)
T TIGR01788 309 VIAQYYNFLRLGRE--GYRKIMQNSLDVARYLAEEIAKLGPFEIISDGS-GIPLVAFKLKDDA--DPGYTLYDLSHRLRE 383 (431)
T ss_pred HHHHHHHHHHhcHH--HHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCC-CceEEEEEeCCCC--CCCcCHHHHHHHHHH
Confidence 33344444544444 899999999999999999999998898887621 3789999986210 113567789999976
Q ss_pred hcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 383 RFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 383 ~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
+ |+.+.....+.. ....-++|+++....+.+.++++++.|++++..
T Consensus 384 ~-G~~~~~~~~p~~-------------~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (431)
T TIGR01788 384 R-GWIVPAYTLPKN-------------AEDIVVMRIVVREGFSRDLAELLIEDIEAALAY 429 (431)
T ss_pred C-CCcccCCCCCCc-------------cCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 4 998743332211 123457999998888999999999999998754
No 28
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=100.00 E-value=2.7e-32 Score=268.05 Aligned_cols=345 Identities=15% Similarity=0.148 Sum_probs=252.5
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCC-CCcEEEecChhHHHHHHHHHhhccccc
Q 012991 46 GSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADD-VGEISLVDNATTAAAIVLQQIGRGFTE 124 (452)
Q Consensus 46 ~~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~-~~~i~~t~g~t~a~~~~~~~l~~~~~~ 124 (452)
+++...++.+++++.... . +....+.+.++++++.+++++|+++ .+.+++++|||+++..++.++
T Consensus 11 pgP~~~~~~~~~a~~~~~----~----~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l------ 76 (368)
T PRK13479 11 PGPLTTSRTVREAMLRDW----G----SWDDDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSL------ 76 (368)
T ss_pred CCCCCCCHHHHHHhCCCC----C----CCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhc------
Confidence 334444555777765532 1 1122345678999999999999962 256889999999999999987
Q ss_pred CCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCC
Q 012991 125 GRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMP 203 (452)
Q Consensus 125 ~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~t 203 (452)
..++++|++..+.+.+. .+..++++.|++++.++.+ .++.+ ++++++++++ ..++++|++++++|+|
T Consensus 77 --~~~~~~vlv~~~~~~~~--~~~~~~~~~g~~~~~i~~~----~~~~~d~~~l~~~l~~----~~~~~~v~~~~~~~~t 144 (368)
T PRK13479 77 --VPRDGKVLVPDNGAYGA--RIAQIAEYLGIAHVVLDTG----EDEPPDAAEVEAALAA----DPRITHVALVHCETTT 144 (368)
T ss_pred --cCCCCeEEEEeCCchHH--HHHHHHHHcCCcEEEEECC----CCCCCCHHHHHHHHHh----CCCCcEEEEEcccCcc
Confidence 46788888876665543 2334467789999999653 22334 8889988853 2467899999999999
Q ss_pred cccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCccccCCCCCceecc
Q 012991 204 CVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMHHPVVSHE 283 (452)
Q Consensus 204 G~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~~~~~~~~ 283 (452)
|...|+++|.++|+++|+ ++++|+++++|..++++..+++|++++|+|||++||+|+|++++++++++. +......+.
T Consensus 145 G~~~~~~~i~~l~~~~~~-~livDa~~~~g~~~~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~-~~~~~~~~~ 222 (368)
T PRK13479 145 GILNPLDEIAAVAKRHGK-RLIVDAMSSFGAIPIDIAELGIDALISSANKCIEGVPGFGFVIARRSELEA-CKGNSRSLS 222 (368)
T ss_pred ccccCHHHHHHHHHHcCC-EEEEEcccccCCccccccccCceEEEecCccccccCCCceEEEECHHHHHH-hhcCCCCee
Confidence 999999999999999999 899999999999888988889999999999999999999999999887765 211110000
Q ss_pred CCC----C-cccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcc-cccceE
Q 012991 284 FGN----G-LPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPE-ICAAMV 357 (452)
Q Consensus 284 ~~~----~-~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~ 357 (452)
... . ......+..+++...++++.++++.+.+ .++.++..+++.++++++++.|.++ |+++..++. ....++
T Consensus 223 ~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~ 300 (368)
T PRK13479 223 LDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEE-EGGVPARGARYANNQRTLVAGMRAL-GFEPLLDAEIQSPIIV 300 (368)
T ss_pred ecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHHHc-CCcccCCchhcCceEE
Confidence 000 0 0000112236777778888889987765 2468888899999999999999887 777654432 223456
Q ss_pred EEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHH
Q 012991 358 MVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVI 437 (452)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~ 437 (452)
.|.++.. ...+..++.+.|.++ ||.+..+.. ...+++|+++..+++.+|+++++++|+
T Consensus 301 ~~~~~~~----~~~~~~~l~~~L~~~-gi~v~~g~~-----------------~~~~~iRis~~~~~t~edi~~~l~~L~ 358 (368)
T PRK13479 301 TFHAPAD----PAYDFKEFYERLKEQ-GFVIYPGKL-----------------TQVDTFRIGCIGDVDAADIRRLVAAIA 358 (368)
T ss_pred EEECCCC----CCcCHHHHHHHHHHC-CEEEecCCC-----------------CCCCEEEEecCCCCCHHHHHHHHHHHH
Confidence 6666521 124567899999775 999964321 113589999888899999999999999
Q ss_pred HHHhc
Q 012991 438 LLVEE 442 (452)
Q Consensus 438 ~~~~~ 442 (452)
++++.
T Consensus 359 ~~l~~ 363 (368)
T PRK13479 359 EALYW 363 (368)
T ss_pred HHHHH
Confidence 99864
No 29
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=7.6e-32 Score=262.07 Aligned_cols=339 Identities=12% Similarity=0.087 Sum_probs=255.6
Q ss_pred CCCeEEeccCCCCCCcHHHHHHHHHHHHHHhcCCchhh--hhhhhHHHHHHHHHHHhHhCCCCCC-cEEEecChhHHHHH
Q 012991 37 QHGVARINNGSFGSCPKSVLADQQKWQLKFLQQPDDFY--FNSLRKGILESRAAVKDLINADDVG-EISLVDNATTAAAI 113 (452)
Q Consensus 37 ~~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~la~~~~~~~~~-~i~~t~g~t~a~~~ 113 (452)
+++..++........+....+.+..+.....++|.... +....+..+++++.+++++|+++.+ ..+||+|||+++..
T Consensus 20 ~~~~~~~g~p~~~~~~~~~~~~~~~~~~~n~gnp~~~~~~g~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~ 99 (380)
T PRK02769 20 HNQYFNVGYPEAADFDYSALKRFFSFSINNCGDPYSKSNYPLNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLY 99 (380)
T ss_pred HhhhcccCCCchhhcCHHHHHHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHH
Confidence 45556666565554543455555555544445665532 2345678899999999999997323 24899999999877
Q ss_pred HHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceE
Q 012991 114 VLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIR 192 (452)
Q Consensus 114 ~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~ 192 (452)
++.+. | ...++++|++++.+|+|+.+++..+ |.+.+.++ .+.++.+ +++|++.+++. +.+|.
T Consensus 100 a~~~a-r-----~~~~~~~ii~s~~~H~Sv~ka~~~l----g~~~~~V~----~~~~g~id~~~L~~~i~~~---~~~t~ 162 (380)
T PRK02769 100 GCYLA-R-----ELFPDGTLYYSKDTHYSVSKIARLL----RIKSRVIT----SLPNGEIDYDDLISKIKEN---KNQPP 162 (380)
T ss_pred HHHHH-H-----HhCCCcEEEeCCCceehHHHHHHHc----CCCCceec----cCCCCcCcHHHHHHHHHhC---CCCcE
Confidence 66543 2 1356789999999999998887554 77777774 3445666 99999999643 45699
Q ss_pred EEEEeccCCCCcccccHHHHHHHHHHcC---CCEEEEecccccCCcc-------ccccccCccEEEEcCcccCcCCCCcE
Q 012991 193 LAIIDHITSMPCVVIPVRKLVKICRDEG---VDQVFVDAAHAMGSIK-------IDVKEIGADFYVSNLHKWFFCPPSVA 262 (452)
Q Consensus 193 lv~~~~~~n~tG~~~~l~~i~~l~~~~~---~~~~ivD~a~~~g~~~-------~~~~~~~~d~~~~s~~K~l~g~~G~G 262 (452)
+|++++++|++|.+.|+++|+++|+++| + ++|+|+|++.+.++ +++.. ++|++++|+|||+++|.|+|
T Consensus 163 lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~-~lHVDaA~gg~~~p~~~~~~~~d~~~-~vDsis~s~HK~~~~P~g~G 240 (380)
T PRK02769 163 IIFANIGTTMTGAIDNIKEIQEILKKIGIDDY-YIHADAALSGMILPFVNNPPPFSFAD-GIDSIAISGHKFIGSPMPCG 240 (380)
T ss_pred EEEEEeCCCCCcccCCHHHHHHHHHHhCCCce-EEEEEecccceeecccCccccCCccC-CCCEEEECCcccCCCCCCcE
Confidence 9999999999999999999999999998 7 59999999998885 66665 89999999999977899999
Q ss_pred EEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHc
Q 012991 263 FLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAW 342 (452)
Q Consensus 263 ~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~ 342 (452)
+++++++.+.. +. +. ..|-.. .+....||.+....++++++++++... |++++.+++.++++++.+.|.+.
T Consensus 241 ~l~~r~~~~~~-~~-~~--~~yl~~--~d~t~~GSR~g~~~l~lw~aL~~lg~~--G~~~~~~~~~~la~~l~~~L~~~- 311 (380)
T PRK02769 241 IVLAKKKYVER-IS-VD--VDYIGS--RDQTISGSRNGHTALLLWAAIRSLGSK--GLRQRVQHCLDMAQYAVDRLQAN- 311 (380)
T ss_pred EEEEehhhhhh-cc-cC--ccccCC--CCCCccCCCCcHHHHHHHHHHHHHCHH--HHHHHHHHHHHHHHHHHHHHHhC-
Confidence 99999877664 21 11 111111 123456899988899999999999875 99999999999999999999875
Q ss_pred CCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccc
Q 012991 343 GTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQV 422 (452)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 422 (452)
++++...+. ..+++|..| + +++ . + |+.+. ..++++|+++..
T Consensus 312 g~~~~~~p~--~~~v~f~~~---------~-~~~----~-~-~w~l~---------------------~~~~~~hi~~~~ 352 (380)
T PRK02769 312 GIPAWRNPN--SITVVFPCP---------S-ERI----W-K-KWHLA---------------------TSGNQAHIITMP 352 (380)
T ss_pred CCEEEcCCC--ceEEEEcCC---------C-HHH----H-h-CeeEc---------------------ccCCEEEEEECC
Confidence 777665554 678888665 1 122 1 3 66553 123589999999
Q ss_pred cCCHHHHHHHHHHHHHHHhc
Q 012991 423 YNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 423 ~~t~~di~~l~~~l~~~~~~ 442 (452)
.+|.+.|+.+++.|.+....
T Consensus 353 ~~~~~~~~~f~~dl~~~~~~ 372 (380)
T PRK02769 353 HHNKQQIDSLIDELIFDLKN 372 (380)
T ss_pred CCCHHHHHHHHHHHHHHHhc
Confidence 99999999999999988864
No 30
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=100.00 E-value=1.5e-31 Score=261.63 Aligned_cols=339 Identities=17% Similarity=0.166 Sum_probs=246.3
Q ss_pred CCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCC-CcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 48 FGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDV-GEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 48 ~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
+...++.+.+++.... .. +...+.+.++++++.+++++|+++. ..+++++|||+++..++.++
T Consensus 7 p~~~~~~~~~~~~~~~----~~----~~~~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~-------- 70 (355)
T TIGR03301 7 PLSTSATVRDAMLVDW----CH----WDSEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSL-------- 70 (355)
T ss_pred CCCCCHHHHHHhhhhc----cC----CCHHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhc--------
Confidence 4445555888877621 11 1222347799999999999999733 26788999999999999976
Q ss_pred CCCCCEEEEe-CCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCc
Q 012991 127 FHRNDTVLML-HCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPC 204 (452)
Q Consensus 127 ~~~g~~Vl~~-~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG 204 (452)
+.++++|++. .+.|.+. +..+++..|.+++.++.+ .++.+ .+++++.+++ +.++++|++++++|++|
T Consensus 71 ~~~~~~vi~~~~~~~~~~---~~~~a~~~g~~~~~i~~~----~~~~~d~~~l~~~l~~----~~~~~~v~~~~~~~~~G 139 (355)
T TIGR03301 71 VPRDGKLLVLINGAYGER---LAKICEYLGIPHTDLNFS----EYEPPDLNRIEEALAA----DPDITHVATVHHETTTG 139 (355)
T ss_pred cCCCCeEEEECCCchhhH---HHHHHHHcCCceEEEecC----CCCCCCHHHHHHHHHh----CCCceEEEEEecCCccc
Confidence 4667776655 4455442 233367789999999652 22233 7899998864 35678899999999999
Q ss_pred ccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCccccCCCCCceeccC
Q 012991 205 VVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMHHPVVSHEF 284 (452)
Q Consensus 205 ~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~~~~~~~~~ 284 (452)
.+.|+++|+++|++||+ ++|+|++++.|..++++..+++|++++|++||++|++|+|++++++++++. +........+
T Consensus 140 ~~~~~~~i~~l~~~~~~-~livD~~~s~g~~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~-~~~~~~~~~~ 217 (355)
T TIGR03301 140 ILNPLEAIAKVARSHGA-VLIVDAMSSFGAIPIDIEELDVDALIASANKCLEGVPGFGFVIARRDLLEA-SAGNARSLYL 217 (355)
T ss_pred chhHHHHHHHHHHHcCC-EEEEEeccccCCcccchhhcCccEEEecCCcccccCCceeEEEECHHHHHH-hhCCCCCcee
Confidence 99999999999999999 799999999998888888889999999999998899999999999988765 2111100000
Q ss_pred CCCc-----ccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccc-cceEE
Q 012991 285 GNGL-----PIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEIC-AAMVM 358 (452)
Q Consensus 285 ~~~~-----~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~~~~ 358 (452)
.... .....+..+++...++++.++++.+.+. +++++..++.+++++++.+.|.++ ++++..++... +.+++
T Consensus 218 ~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~~~~~~~~~~~~ 295 (355)
T TIGR03301 218 DLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAE-GGVPARIARYRRNRELLVDGLRAL-GFQPLLPERWQSPIIVS 295 (355)
T ss_pred eHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCCCCcEEE
Confidence 0000 0001123467777778888889888753 248889999999999999999886 77655443322 34567
Q ss_pred EEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHH
Q 012991 359 VGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVIL 438 (452)
Q Consensus 359 ~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~ 438 (452)
+.+|.. ...+..++.+.|.++ ||.+..+..+ . .+++|++++.+++.+|++++++.|++
T Consensus 296 ~~~~~~----~~~~~~~~~~~l~~~-gi~i~~~~~~----------------~-~~~iRis~~~~~~~~~i~~~~~~l~~ 353 (355)
T TIGR03301 296 FLYPDD----PDFDFDDFYQELKER-GFVIYPGKLT----------------L-ADTFRIGTIGEIDAADIERLLEAIKD 353 (355)
T ss_pred EECCCC----CcchHHHHHHHHHHC-CEEEECCccc----------------c-ccEEEEecCCCCCHHHHHHHHHHHHh
Confidence 777620 113556889999765 9998654321 1 26899999988999999999999987
Q ss_pred H
Q 012991 439 L 439 (452)
Q Consensus 439 ~ 439 (452)
+
T Consensus 354 ~ 354 (355)
T TIGR03301 354 A 354 (355)
T ss_pred h
Confidence 5
No 31
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=100.00 E-value=2.7e-31 Score=261.85 Aligned_cols=358 Identities=17% Similarity=0.141 Sum_probs=254.1
Q ss_pred CCCCeEEeccCC-CCCCcHHHHHHHHHHHHHHhcCCch---hhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHH
Q 012991 36 HQHGVARINNGS-FGSCPKSVLADQQKWQLKFLQQPDD---FYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAA 111 (452)
Q Consensus 36 ~~~~~~~l~~~~-~~~~p~~v~e~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~ 111 (452)
+.+..++|+.-. .++.++.+++++.++.... +++++ .......+..+++++.+++++|++ ++++++|+|+++
T Consensus 16 ~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~---~~~~~~g~t~a~ 91 (387)
T PRK09331 16 LEEEFINLDPIQRGGILTPEARKALIEYGDGY-SVCDYCPGRLDQIKKPPIADFHEDLAEFLGMD---EARVTHGAREGK 91 (387)
T ss_pred ccccccccChhhcCCCCCHHHHHHHHHHHhcc-CCCcccccccccccChHHHHHHHHHHHHhCCC---cEEEeCCHHHHH
Confidence 345566776544 5699999999999988543 34432 223444557899999999999995 578899999999
Q ss_pred HHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhcc-ccCCC
Q 012991 112 AIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKG-KKDGK 189 (452)
Q Consensus 112 ~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~-~~~~~ 189 (452)
..++.++ +++|++|+++.++|.+...++ ...|++++.++.+ .+.++.+ ++++++.+++. ....+
T Consensus 92 ~~al~~l--------~~~gd~Vlv~~~~h~s~~~~~----~~~G~~~~~v~~~--~~~~~~~d~~~l~~~l~~~~~~~~~ 157 (387)
T PRK09331 92 FAVMHSL--------CKKGDYVVLDGLAHYTSYVAA----ERAGLNVREVPKT--GYPEYKITPEAYAEKIEEVKEETGK 157 (387)
T ss_pred HHHHHHh--------cCCCCEEEECCCchHHHHHHH----HHcCCEEEEEeCc--cCcCCCcCHHHHHHHHHHhhhccCC
Confidence 9999887 489999999999999987654 4569999999642 1333445 88999888642 11124
Q ss_pred ceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecC
Q 012991 190 MIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKS 269 (452)
Q Consensus 190 ~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~ 269 (452)
++++|++++++|++|.+.|+++|+++|+++|+ ++++|++|+.|..+++...+++|++++|+|||+++|.|+|+++++++
T Consensus 158 ~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~-~livD~a~~~g~~~~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~~ 236 (387)
T PRK09331 158 PPALALLTHVDGNYGNLADAKKVAKVAHEYGI-PFLLNGAYTVGRMPVDGKKLGADFIVGSGHKSMAASAPSGVLATTEE 236 (387)
T ss_pred CCEEEEEECCCCCCcccccHHHHHHHHHHcCC-EEEEECCcccCCcCCCHHHcCCCEEEeeCcccccCCCCEEEEEECHH
Confidence 78999999999999999999999999999999 89999999999999998888999999999999988888999999988
Q ss_pred ccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCC
Q 012991 270 ILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSP 349 (452)
Q Consensus 270 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 349 (452)
+++. +.... ..+.... . ..+.++......+++.++++.+.+. .+ ..++..++++++++.|.+++|++++..
T Consensus 237 ~i~~-~~~~~--~~~~~~~-~-~~~~~~~~~~~~~~~~aal~~~~~~---~~-~~~~~~~~~~~l~~~L~~l~g~~~~~~ 307 (387)
T PRK09331 237 YADK-VFRTS--RKFGVKE-V-ELLGCTLRGAPLVTLMASFPHVVER---VK-RWDEEVKKARWFVDELEKIEGFKQLGE 307 (387)
T ss_pred HHhh-ccccc--CCCcccc-e-eeeceecCchHHHHHHHHHHHHHHH---HH-HHHHHHHHHHHHHHHHhcCCCEEEecc
Confidence 7765 21111 0011100 0 0111223333444455566555542 22 344557788899999999888887743
Q ss_pred cccccceEEEEcCCccc--cCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHH
Q 012991 350 PEICAAMVMVGLPSRLR--VMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLE 427 (452)
Q Consensus 350 ~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~ 427 (452)
.....+++.+..|.... .....++.++.+.|.+ +||... . ......+|+.... +|.+
T Consensus 308 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~gI~~~----~---------------~~~~~i~ri~~~g-~t~~ 366 (387)
T PRK09331 308 KPRNHDLMKFETPSFDEIAKKHKRRGFFLYEELKK-RGIHGI----K---------------PGATKEFKLSTYG-LTWE 366 (387)
T ss_pred CcCcCCeEEEeCCchhHHhhhccccchhHHHHHHH-cCceEE----c---------------cCCceEEEEEecc-CCHH
Confidence 22225676666551100 0112345679999976 599731 1 1223467777744 6999
Q ss_pred HHHHHHHHHHHHHhc
Q 012991 428 DYEKFRDAVILLVEE 442 (452)
Q Consensus 428 di~~l~~~l~~~~~~ 442 (452)
|+++++++|+++.++
T Consensus 367 di~~l~~aL~~i~~~ 381 (387)
T PRK09331 367 QVEYVADAFKEIAEK 381 (387)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999765
No 32
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=100.00 E-value=5.1e-32 Score=263.59 Aligned_cols=340 Identities=17% Similarity=0.116 Sum_probs=239.8
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhcCCchh------hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecC-hhHHHHHHHHHh
Q 012991 46 GSFGSCPKSVLADQQKWQLKFLQQPDDF------YFNSLRKGILESRAAVKDLINADDVGEISLVDN-ATTAAAIVLQQI 118 (452)
Q Consensus 46 ~~~~~~p~~v~e~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g-~t~a~~~~~~~l 118 (452)
+++.+.|++|++++..++.... ++++. ....+.+.++++|+.++++++++++++++||+| +|++++.++.++
T Consensus 5 pGp~~~p~~V~~a~~~~~~~~~-~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l 83 (355)
T cd00611 5 AGPAALPEEVLEQAQKELLDFN-GLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNL 83 (355)
T ss_pred CCCCCCCHHHHHHHHHHHhhcc-cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhc
Confidence 4567788889999999886543 43331 124556889999999999999865678999987 999999999988
Q ss_pred hcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEec
Q 012991 119 GRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDH 198 (452)
Q Consensus 119 ~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~ 198 (452)
.. ..+++++|++....|. +..++++.|++++.++.+... ..+...+..+..+ ++++++|.++|
T Consensus 84 ~~-----~~~~~~~i~~g~~~~~-----~~~~a~~~g~~~~~~~~~~~g-~~~~~~~~~~~~~------~~~~~lV~~~h 146 (355)
T cd00611 84 LG-----DKGTADYVVTGAWSAK-----AAKEAKRYGGVVVIVAAKEEG-KYTKIPDVETWDL------APDAAYVHYCS 146 (355)
T ss_pred CC-----CCCeEEEEECCHHHHH-----HHHHHHhcCCCcEEEeccccc-CCCCCCCHhhcCC------CCCCCEEEEeC
Confidence 31 1235566665333332 233468889999999652110 0101122222334 57899999999
Q ss_pred cCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCccccCCCCC
Q 012991 199 ITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMHHP 278 (452)
Q Consensus 199 ~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~~~ 278 (452)
.+|.||...+ ++++.||+ +++||++|++|+.++|+++++ ++++|.||+ +||+|+|+++++++++++ ..+
T Consensus 147 ~~t~tG~~~~-----~i~~~~g~-~~~VDa~qs~g~~~idv~~~~--~~~ss~~K~-lGP~G~g~l~~~~~~~~~--~~~ 215 (355)
T cd00611 147 NETIHGVEFD-----EVPDTGGV-PLVADMSSNILSRPIDVSKFG--VIYAGAQKN-LGPAGVTVVIVRKDLLGK--ARK 215 (355)
T ss_pred CcccccEEcc-----eecccCCC-eEEEEccccccCCCCCHHHhC--EEEeecccc-cCCCceEEEEECHHHHhh--ccc
Confidence 9999999843 45566999 899999999999999999875 466779996 689999999999988875 222
Q ss_pred ceeccCC-CCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCccccc-c
Q 012991 279 VVSHEFG-NGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPPEICA-A 355 (452)
Q Consensus 279 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~-~ 355 (452)
.....+. ........+.+||++..++++.++++++.+. +|++++.++.+++++++++.|.+++|+. ...++..++ .
T Consensus 216 ~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~-gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~ 294 (355)
T cd00611 216 ITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQ-GGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRM 294 (355)
T ss_pred CCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCce
Confidence 2110010 0001112236899999999999999999863 3699999999999999999999997752 222222234 5
Q ss_pred eEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHH
Q 012991 356 MVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDA 435 (452)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~ 435 (452)
++.|.++.. ..+ .++.+.+.+ .|+.++.++. ..+.+|+|+.+|||.+||++++++
T Consensus 295 vvsf~~~~~-----~l~-~~~~~~~~r-~G~~~~~~~~------------------~~g~vR~S~~~~nt~edi~~l~~a 349 (355)
T cd00611 295 NVPFRLGKE-----ELE-KEFLKEAEA-AGMIGLKGHR------------------SVGGIRASIYNALSLEGVQALADF 349 (355)
T ss_pred EEEEEcCCh-----hhh-HHHHHHHHH-CCCcccCCCc------------------ccCeEEEEccCCCCHHHHHHHHHH
Confidence 588887621 112 344444433 5887654432 136899999999999999999999
Q ss_pred HHHHH
Q 012991 436 VILLV 440 (452)
Q Consensus 436 l~~~~ 440 (452)
|+++.
T Consensus 350 l~~~~ 354 (355)
T cd00611 350 MKEFQ 354 (355)
T ss_pred HHHHh
Confidence 99865
No 33
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=100.00 E-value=1.2e-31 Score=259.14 Aligned_cols=334 Identities=17% Similarity=0.115 Sum_probs=244.7
Q ss_pred CCcHHHHHHHHHHHHHHhcCCch------hhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecC-hhHHHHHHHHHhhccc
Q 012991 50 SCPKSVLADQQKWQLKFLQQPDD------FYFNSLRKGILESRAAVKDLINADDVGEISLVDN-ATTAAAIVLQQIGRGF 122 (452)
Q Consensus 50 ~~p~~v~e~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g-~t~a~~~~~~~l~~~~ 122 (452)
..|.+|++++.+++..+. +.+. +....+.+.++++++.++++++.++..+++|++| ||.|++.++.++
T Consensus 2 ~~p~~v~~~~~~~~~~~~-~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl---- 76 (349)
T TIGR01364 2 ALPEEVLEQAQKELLNFN-GTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNL---- 76 (349)
T ss_pred CCCHHHHHHHHHHHhCcc-CCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhc----
Confidence 578899999999987554 3222 2335566899999999999999853457888866 999999999987
Q ss_pred ccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCC
Q 012991 123 TEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITS 201 (452)
Q Consensus 123 ~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n 201 (452)
+.+++++++......+ ..|..+|++.|. +..+..+...+....+ +++++ + ++++++|.++|.+|
T Consensus 77 ----~~~~~~~l~i~~G~fg--~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~------~~~~~~v~~th~ET 141 (349)
T TIGR01364 77 ----LAEGKVADYIVTGAWS--KKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--I------SEDAAYVHYCANET 141 (349)
T ss_pred ----CCCCCeEEEEECCHHH--HHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--C------CCCCCEEEEcCCCC
Confidence 4678888876555544 345666899998 7776532000000111 33333 2 46799999999999
Q ss_pred CCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCccccCCCCCcee
Q 012991 202 MPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMHHPVVS 281 (452)
Q Consensus 202 ~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~~~~~~ 281 (452)
+||+..| ++++.+++ +++||+++++|+.++|++.+ |++++|+||+ +||+|+|+++++++++++ + .+...
T Consensus 142 stGv~~~-----~l~~~~~~-l~iVDavss~g~~~id~~~~--d~~~~ssqK~-lgP~Glg~l~~s~~~~~~-~-~~~~~ 210 (349)
T TIGR01364 142 IHGVEFR-----ELPDVKNA-PLVADMSSNILSRPIDVSKF--GLIYAGAQKN-IGPAGLTVVIVRKDLLGR-A-SRITP 210 (349)
T ss_pred cccEecc-----eecccCCC-eEEEEccccccCccCCHHHc--cEEEEecccc-cCCCceEEEEECHHHHhh-c-ccCCC
Confidence 9999887 67777899 89999999999999999975 5999999997 579999999999998875 2 22211
Q ss_pred ccCCC-C-cccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCC-Cccccc-ceE
Q 012991 282 HEFGN-G-LPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGS-PPEICA-AMV 357 (452)
Q Consensus 282 ~~~~~-~-~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~-~~~ 357 (452)
.+.. . .......++||++..++++.++++++.+. +|++++.++.+.+++++++.|++++|+.... ++..++ .++
T Consensus 211 -~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~-gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~ 288 (349)
T TIGR01364 211 -SMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQ-GGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNV 288 (349)
T ss_pred -CcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEE
Confidence 1110 0 01112345899999999999999999862 3699999999999999999999997764442 222234 568
Q ss_pred EEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHH
Q 012991 358 MVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVI 437 (452)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~ 437 (452)
.|.++.. .. ..++...+.+ .|++++.++. ..+.+|+|+.++||.+||++++++|+
T Consensus 289 sf~~~~~-----~~-~~~~~~~~~~-~Gi~~~~~~~------------------~~g~vRvS~~~~nt~edid~l~~al~ 343 (349)
T TIGR01364 289 VFTLGNE-----EL-EKRFLKEAEE-RGLVSLKGHR------------------SVGGMRASIYNAMPLEGVQALVDFMK 343 (349)
T ss_pred EEecCCh-----hH-hHHHHHHHHH-CCCcccCCcc------------------ccCeeEEECcCCCCHHHHHHHHHHHH
Confidence 8887621 22 2456566654 5997654433 13689999999999999999999999
Q ss_pred HHHh
Q 012991 438 LLVE 441 (452)
Q Consensus 438 ~~~~ 441 (452)
++.+
T Consensus 344 ~~~~ 347 (349)
T TIGR01364 344 EFQK 347 (349)
T ss_pred HHHH
Confidence 9775
No 34
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=100.00 E-value=8.7e-31 Score=257.78 Aligned_cols=336 Identities=18% Similarity=0.153 Sum_probs=245.4
Q ss_pred EeccCCCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcc
Q 012991 42 RINNGSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRG 121 (452)
Q Consensus 42 ~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~ 121 (452)
+|+...+.+.|. +.+++.++......++... ....+..+++++++++++|++ .+.+++++|||+++..++.++...
T Consensus 24 ~~~~~~~~~~~~-~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~~~la~~~g~~-~~~~~~~~ggt~a~~~a~~~~~~~ 99 (371)
T PRK13520 24 ILSSMCTEPHPI-ARKAHEMFLETNLGDPGLF--PGTAKLEEEAVEMLGELLHLP-DAYGYITSGGTEANIQAVRAARNL 99 (371)
T ss_pred eeeeeecCchHH-HHHHHHHHHhcCCCCcccC--ccHHHHHHHHHHHHHHHhCCC-CCCeEEecCcHHHHHHHHHHHHhh
Confidence 377655555555 7888888776533333222 234566789999999999996 567899999999999888765311
Q ss_pred cccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccC
Q 012991 122 FTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHIT 200 (452)
Q Consensus 122 ~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~ 200 (452)
..+++++|++++++|.+.... ++..|.+++.++. +.++.+ +++|++++ .+++++|++++++
T Consensus 100 ----~~~~~~~vl~~~~~h~s~~~~----~~~~g~~~~~v~~----~~~~~~d~~~l~~~i------~~~~~~vi~~~~~ 161 (371)
T PRK13520 100 ----AKAEKPNIVVPESAHFSFDKA----ADMLGVELRRAPL----DDDYRVDVKAVEDLI------DDNTIGIVGIAGT 161 (371)
T ss_pred ----ccCCCceEEecCcchHHHHHH----HHHcCceEEEecC----CCCCcCCHHHHHHHH------hhCCEEEEEEcCC
Confidence 113578999999999885443 4556999999954 333444 89999999 4567788888889
Q ss_pred CCCcccccHHHHHHHHHHcCCCEEEEecccccCCcc-------ccccccCccEEEEcCcccCcCCCCcEEEEEecC-ccc
Q 012991 201 SMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIK-------IDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKS-ILS 272 (452)
Q Consensus 201 n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~-------~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~-~~~ 272 (452)
|++|.+.|+++|.++|+++|+ ++++|++|+.+..+ ++....++|++++|+|||..+|.++|+++++++ ++.
T Consensus 162 ~~tG~~~~l~~I~~l~~~~g~-~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~ 240 (371)
T PRK13520 162 TELGQVDPIPELSKIALENGI-FLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLAPIPAGGILFRDESYLD 240 (371)
T ss_pred cCCcccCCHHHHHHHHHHcCC-CEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCccCCceEEEEcCHHHHH
Confidence 999999999999999999999 69999999866533 334445789999999998776777787776544 444
Q ss_pred cCCC--CCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCc
Q 012991 273 SDMH--HPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPP 350 (452)
Q Consensus 273 ~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 350 (452)
. +. .++. .+.. +..+.|+++...++++.++++.+... |++++.++..++++++.+.|.++ ++++..++
T Consensus 241 ~-l~~~~~~~---~~~~---~~~~~gt~~~~~~~~~~~al~~l~~~--g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 310 (371)
T PRK13520 241 A-LAVDTPYL---TSKK---QATLTGTRSGAGVAATYAVMKYLGRE--GYRKVVERCMENTRWLAEELKER-GFEPVIEP 310 (371)
T ss_pred h-hcccCccc---cCCC---CcceEeeccChHHHHHHHHHhhhcHh--HHHHHHHHHHHHHHHHHHHHHhC-CCEEecCC
Confidence 3 21 1211 1110 12234666666777788888877643 88889999999999999999987 77633232
Q ss_pred ccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHH
Q 012991 351 EICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYE 430 (452)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~ 430 (452)
. .+++.+.++ +..++.+.|.++ ||.+... ..++++|+|++.++|++||+
T Consensus 311 ~--~~~v~~~~~---------~~~~v~~~L~~~-gi~v~~~-------------------~~~~~iRis~~~~~t~edi~ 359 (371)
T PRK13520 311 V--LNIVAFDDP---------NPDEVREKLRER-GWRVSVT-------------------RCPEALRIVCMPHVTREHIE 359 (371)
T ss_pred C--ceEEEEecC---------CHHHHHHHHHHC-CceeccC-------------------CCCCEEEEEEECCCCHHHHH
Confidence 2 557777764 456888999765 9988532 12368999999999999999
Q ss_pred HHHHHHHHHHh
Q 012991 431 KFRDAVILLVE 441 (452)
Q Consensus 431 ~l~~~l~~~~~ 441 (452)
++++.|+++++
T Consensus 360 ~~~~~l~~~~~ 370 (371)
T PRK13520 360 NFLEDLKEVKK 370 (371)
T ss_pred HHHHHHHHHhh
Confidence 99999998764
No 35
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=100.00 E-value=2e-31 Score=258.78 Aligned_cols=342 Identities=14% Similarity=0.092 Sum_probs=246.6
Q ss_pred eccCCCCCCcHHHHHHHHHHHHHHhc-----CCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEe-cChhHHHHHHHH
Q 012991 43 INNGSFGSCPKSVLADQQKWQLKFLQ-----QPDDFYFNSLRKGILESRAAVKDLINADDVGEISLV-DNATTAAAIVLQ 116 (452)
Q Consensus 43 l~~~~~~~~p~~v~e~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t-~g~t~a~~~~~~ 116 (452)
|=++++...|++|++++...+.++.. .+..+....+.+.++++++.++++++.++..+++++ ++||.|++.++.
T Consensus 6 l~~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~ 85 (360)
T PRK05355 6 NFSAGPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPM 85 (360)
T ss_pred eccCCCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHH
Confidence 33466788888899999988754321 112234466678999999999999998534556655 678899999999
Q ss_pred HhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHH-HHhccccCCCceEEE
Q 012991 117 QIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKK-GIEKGKKDGKMIRLA 194 (452)
Q Consensus 117 ~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~-~i~~~~~~~~~~~lv 194 (452)
++ +.+|+++++......+ ..|..+|++.|.. ..+..++ ..+.. ..++++ .+ .+++++|
T Consensus 86 nl--------~~~g~~~l~i~~G~fg--~r~~~~a~~~g~~-~~~~~~~---~~g~~~~~~~~~~~l------~~~~~~V 145 (360)
T PRK05355 86 NL--------LGGGKKADYVDTGSWS--KKAIKEAKKYGEV-NVAASSE---DDGFTYIPPLDEWQL------SDDAAYV 145 (360)
T ss_pred hc--------CCCCCeEEEEECCHHH--HHHHHHHHHhCCc-eEEeccc---ccCCCCCCChhhccC------CCCCCEE
Confidence 87 5788887776544433 3445568888865 5553321 01111 233333 56 4578999
Q ss_pred EEeccCCCCcccc-cHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCcccc
Q 012991 195 IIDHITSMPCVVI-PVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSS 273 (452)
Q Consensus 195 ~~~~~~n~tG~~~-~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~ 273 (452)
.++|.+|+||... |+++| +|+ +++||+++++|+.++|++.+ |++++|.||+ +||+|+|+++++++++++
T Consensus 146 ~~th~eTstGv~~~~i~~i------~g~-l~vVDavss~g~~~idv~~~--d~~~~ssqK~-lgP~Glg~l~~s~~~l~~ 215 (360)
T PRK05355 146 HYTSNETIDGTEFHELPDT------GDV-PLVADMSSDILSRPIDVSKF--GLIYAGAQKN-IGPAGLTIVIVREDLLGR 215 (360)
T ss_pred EEccCCCcceEecCccccc------CCC-cEEEEcCccccCccCCHHHc--cEEEEecccc-ccCCceEEEEECHHHHhh
Confidence 9999999999998 77766 899 89999999999999999976 5999999997 579999999999999876
Q ss_pred CCCCCceeccCCCC-cccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCccc
Q 012991 274 DMHHPVVSHEFGNG-LPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEI 352 (452)
Q Consensus 274 ~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 352 (452)
+ .+.....+... .......++||++..++++.++++++.+. +|++++.++.+++++++++.|++++.+....++..
T Consensus 216 -~-~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~-gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~ 292 (360)
T PRK05355 216 -A-LPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQ-GGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPED 292 (360)
T ss_pred -c-ccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHc-cCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhh
Confidence 2 23111000000 00122346899999999999999999862 37999999999999999999999853333233222
Q ss_pred cc-ceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHH
Q 012991 353 CA-AMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEK 431 (452)
Q Consensus 353 ~~-~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~ 431 (452)
++ .++.|.++ +.....++...+.+ .||.++.++. ..+.+|+|+.+|||.+||++
T Consensus 293 rs~~v~sf~~~------~~~~~~~~~~~~~~-~Gi~~~~~~~------------------~~g~vRiS~~~~nt~eei~~ 347 (360)
T PRK05355 293 RSRMNVPFTLA------DEELDKKFLAEAKA-AGLVGLKGHR------------------SVGGMRASIYNAMPLEGVQA 347 (360)
T ss_pred cCCcEEEEEcC------ChHHHHHHHHHHHH-CCCcccCCCC------------------ccCcEEEECCCCCCHHHHHH
Confidence 34 67888887 23333566666655 5998743332 13689999999999999999
Q ss_pred HHHHHHHHHhc
Q 012991 432 FRDAVILLVEE 442 (452)
Q Consensus 432 l~~~l~~~~~~ 442 (452)
|+++|++++..
T Consensus 348 l~~~l~~~~~~ 358 (360)
T PRK05355 348 LVDFMKEFERR 358 (360)
T ss_pred HHHHHHHHHHh
Confidence 99999998753
No 36
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.98 E-value=3.2e-30 Score=252.06 Aligned_cols=342 Identities=16% Similarity=0.189 Sum_probs=250.4
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhC----CC-CCC-cEEEecChhHH
Q 012991 38 HGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLIN----AD-DVG-EISLVDNATTA 110 (452)
Q Consensus 38 ~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~----~~-~~~-~i~~t~g~t~a 110 (452)
..+++|+.|.+. +.|+.+.+++.+.+.... .. |.+.++..++|+++++++. ++ +++ +|++|+|+++|
T Consensus 28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~----~~--Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~a 101 (393)
T COG0436 28 EDVIDLSIGEPDFPTPEHIIEAAIEALEEGG----TH--YTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEA 101 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhccc----CC--CCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHH
Confidence 579999999987 778889999988775421 11 2245566777777776654 22 244 49999999999
Q ss_pred HHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCC
Q 012991 111 AAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGK 189 (452)
Q Consensus 111 ~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~ 189 (452)
+..++.++ +++||+|++++|.|+++...+.. .|+++..+++..+. ++..+ .++|++++ ++
T Consensus 102 l~~~~~a~--------~~pGDeVlip~P~Y~~y~~~~~~----~gg~~v~v~l~~~~-~~f~~d~~~l~~~i------~~ 162 (393)
T COG0436 102 LFLAFLAL--------LNPGDEVLIPDPGYPSYEAAVKL----AGGKPVPVPLDEEE-NGFKPDLEDLEAAI------TP 162 (393)
T ss_pred HHHHHHHh--------cCCCCEEEEeCCCCcCHHHHHHh----cCCEEEEEeCCcCc-cCCcCCHHHHHhhc------Cc
Confidence 99999987 69999999999999997666544 59999999753221 34455 89999999 67
Q ss_pred ceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCc----cc---cccc-cCccEEEEcCcccCcCC
Q 012991 190 MIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSI----KI---DVKE-IGADFYVSNLHKWFFCP 258 (452)
Q Consensus 190 ~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~----~~---~~~~-~~~d~~~~s~~K~l~g~ 258 (452)
+||+|++++|+||||.+++ +++|+++|++|++ ++|.|+++.--.. +. .... ...-+.+.|+||. +++
T Consensus 163 ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i-~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~-~~m 240 (393)
T COG0436 163 KTKAIILNSPNNPTGAVYSKEELKAIVELAREHDI-IIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKT-YGM 240 (393)
T ss_pred cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCe-EEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEeccccc-ccc
Confidence 9999999999999999997 6688999999999 7999999764222 11 1111 1234677799996 889
Q ss_pred CC--cEEEEEe-cCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 012991 259 PS--VAFLYCR-KSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMA 335 (452)
Q Consensus 259 ~G--~G~l~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~ 335 (452)
+| +|+++++ +++++. + ... .......++...+.+..++++.... ....+..++..+++++.+.
T Consensus 241 tGwRvG~~v~~~~~l~~~-~-~~~-----------~~~~~~~~~~~~Q~aa~~aL~~~~~-~~~~~~~~~~~~~rrd~l~ 306 (393)
T COG0436 241 TGWRIGWVVGPPEELIAA-L-RKL-----------KSYLTSCAPTPAQYAAIAALNGPQS-DEVVEEMREEYRERRDLLV 306 (393)
T ss_pred cccceeEeecChHHHHHH-H-HHH-----------HHhcccCCCHHHHHHHHHHhcCccc-hHHHHHHHHHHHHHHHHHH
Confidence 88 8999888 555554 1 101 1111123444555555566654421 1135666778899999999
Q ss_pred HHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccce
Q 012991 336 RMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGY 415 (452)
Q Consensus 336 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (452)
+.|.+++|+.+..++.. .++++..++. ..++.+++..|.++.||.+.++..+... ...++
T Consensus 307 ~~l~~~~g~~~~~~p~G-a~Y~~~~i~~------~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~-------------~g~~~ 366 (393)
T COG0436 307 EALNEIGGLSVVKPPEG-AFYLFPKIPE------LLDSEEFAKKLLEEAGVAVVPGSGFGEP-------------PGEGY 366 (393)
T ss_pred HHHHhcCCeeeccCCCe-eEEEEeecCC------CCCHHHHHHHHHHhCCEEEecccccCCC-------------CCCCe
Confidence 99999988988874432 7788888862 3578899999999889999887776431 24689
Q ss_pred EEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 416 ARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 416 iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
+|+|+.. +.++++..++++++.++.
T Consensus 367 vRis~~~--~~~~l~~a~~rl~~~~~~ 391 (393)
T COG0436 367 VRLSLAT--SEETLEEALRRLARFLAE 391 (393)
T ss_pred EEEEEec--CHHHHHHHHHHHHHHHHh
Confidence 9999986 668899999999988764
No 37
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.97 E-value=2.2e-30 Score=259.71 Aligned_cols=353 Identities=15% Similarity=0.113 Sum_probs=251.0
Q ss_pred CCCeEEeccCCCCCCcHHHHHHHHHHHHHHh--cCCchhh--hhhhhHHHH-HHHHHHHhHhCCCCCCcEEEe---cChh
Q 012991 37 QHGVARINNGSFGSCPKSVLADQQKWQLKFL--QQPDDFY--FNSLRKGIL-ESRAAVKDLINADDVGEISLV---DNAT 108 (452)
Q Consensus 37 ~~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~--~~~~~~~--~~~~~~~~~-~~~~~la~~~~~~~~~~i~~t---~g~t 108 (452)
++..+.|- ++-...++.|++++...+.... ++|++.+ +....+.++ .+++.++++||++ ++++.++ +||+
T Consensus 33 ~~~~l~l~-~sen~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~-~~~~~~~~~~~sgt 110 (452)
T PTZ00094 33 QIEGLELI-ASENFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLD-PEEWGVNVQPYSGS 110 (452)
T ss_pred HHcCeeEe-cccccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCC-cccceeecCCCchH
Confidence 35677776 3455677779999998887655 6666642 233334455 5899999999996 6777676 7999
Q ss_pred HHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh----cC--cEEEEEeCCCCCCChHHH-HHHHHHHH
Q 012991 109 TAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR----AG--GSVVEVQLPFPLASEEEI-INEFKKGI 181 (452)
Q Consensus 109 ~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~----~g--~~v~~~~~~~~~~~~~~~-~~~l~~~i 181 (452)
+|+..++.++ +++||+|+++..+|.++...+..+.+. .+ .++..+ +.+.++.+ +++|++.+
T Consensus 111 ~an~~v~~al--------~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~----~~~~~g~id~~~L~~~l 178 (452)
T PTZ00094 111 PANFAVYTAL--------LQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPY----QVNEKGLIDYDKLEELA 178 (452)
T ss_pred HHHHHHHHHh--------cCCCCEEEecccccCCcccccccccccccccceeeeeeeec----ccCCCCCcCHHHHHHHH
Confidence 9999999987 478999999999998876665332111 11 222233 33444566 89999999
Q ss_pred hccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccc---cCccEEEEcCcccCcCC
Q 012991 182 EKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKE---IGADFYVSNLHKWFFCP 258 (452)
Q Consensus 182 ~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~---~~~d~~~~s~~K~l~g~ 258 (452)
++ .++++|++. ++.+|...|+++|.++|+++|+ ++++|++|++|.++.+... .++|++++|+|||++||
T Consensus 179 ~~-----~~~~lvi~~--~s~~g~~~di~~I~~i~~~~ga-~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~hK~l~GP 250 (452)
T PTZ00094 179 KA-----FRPKLIIAG--ASAYPRDIDYKRFREICDSVGA-YLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRGP 250 (452)
T ss_pred HH-----hCCCEEEEe--CCCCCCccCHHHHHHHHHHcCC-EEEEeccchhccccCCCCCCCCCCCcEEEcCCccCCCCC
Confidence 53 356777764 3458999999999999999999 8999999999998665422 26899999999999999
Q ss_pred CCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHH
Q 012991 259 PSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARML 338 (452)
Q Consensus 259 ~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L 338 (452)
.| |+++++++..+. + .+.... . ....+.|+++...++++.++++++... +.+.+.+++.++++++.+.|
T Consensus 251 ~G-g~l~~~~~~~~~-l-~~~~~~---~---~~p~~~G~~~~~~iaal~~al~~~~~~--~~~~~~~~i~~l~~~l~~~L 319 (452)
T PTZ00094 251 RS-GLIFYRKKVKPD-I-ENKINE---A---VFPGLQGGPHNHQIAAIAVQLKEVQSP--EWKEYAKQVLKNAKALAAAL 319 (452)
T ss_pred Cc-eEEEEecccchH-H-HHhhcc---c---cCCCCCCCchHHHHHHHHHHHHHHhCh--hHHHHHHHHHHHHHHHHHHH
Confidence 98 888888765442 1 111000 0 000123677777888999999998754 78889999999999999999
Q ss_pred HHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeee-cccCCCCCCCCCCCCCCCCCCccceEE
Q 012991 339 ANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPI-HYQAPKDDGQPQAGARDKDGIITGYAR 417 (452)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~iR 417 (452)
.+. |+.+..+... ..++.+.+.. .+.+...+...|.+ +||.+.. +..+... ...++++|
T Consensus 320 ~~~-g~~v~~~~~~-~~~~~v~~~~-----~~~~~~~~~~~L~~-~gI~vs~~~~p~~~~------------~~~~~~vR 379 (452)
T PTZ00094 320 EKR-GYDLVTGGTD-NHLVLVDLRP-----FGITGSKMEKLLDA-VNISVNKNTIPGDKS------------ALNPSGVR 379 (452)
T ss_pred HhC-CcEEecCCCC-CceEeecCCc-----CCCCHHHHHHHHHH-CCcEEecccCCCCCc------------CCCCCeEE
Confidence 886 7776543211 2233333321 24567788888854 6999942 2222110 23457999
Q ss_pred ecccccCC----HHHHHHHHHHHHHHHhc
Q 012991 418 ISHQVYNT----LEDYEKFRDAVILLVEE 442 (452)
Q Consensus 418 is~~~~~t----~~di~~l~~~l~~~~~~ 442 (452)
+|++.+|| ++||+++++.|++++..
T Consensus 380 is~~~~tt~g~~~~di~~l~~~l~~~~~~ 408 (452)
T PTZ00094 380 LGTPALTTRGAKEKDFKFVADFLDRAVKL 408 (452)
T ss_pred ECCHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 99999987 99999999999999974
No 38
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.97 E-value=5e-29 Score=247.10 Aligned_cols=342 Identities=13% Similarity=0.134 Sum_probs=239.5
Q ss_pred CCCCeEEeccCCC-C-CCcHHHHHHHHHHHHHH-hcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHH
Q 012991 36 HQHGVARINNGSF-G-SCPKSVLADQQKWQLKF-LQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAA 112 (452)
Q Consensus 36 ~~~~~~~l~~~~~-~-~~p~~v~e~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~ 112 (452)
.++.+++|..+.+ + ..++.+.+++.+.+..+ .+++.+.+..+..+...++++.+++++|.+ ++++++||++|+.
T Consensus 36 ~g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g~~---~~ii~~~~~~a~~ 112 (393)
T TIGR01822 36 DGREVLNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFLGTE---DTILYASCFDANG 112 (393)
T ss_pred CCceEEEeeCCCccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCC---cEEEECchHHHHH
Confidence 5678899988875 4 34666888888887664 233333222344667799999999999984 5677788999999
Q ss_pred HHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceE
Q 012991 113 IVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIR 192 (452)
Q Consensus 113 ~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~ 192 (452)
.++.++ +++||+|++++++|+++..++.. .+.+...+ +..+ ++++++.+++......+++
T Consensus 113 ~~~~~l--------~~~gd~vi~~~~~~~s~~~~~~~----~~~~~~~~----~~~d----~~~l~~~i~~~~~~~~~~~ 172 (393)
T TIGR01822 113 GLFETL--------LGAEDAIISDALNHASIIDGVRL----CKAKRYRY----ANND----MADLEAQLKEARAAGARHR 172 (393)
T ss_pred HHHHHh--------CCCCCEEEEeccccHHHHHHHHh----cCCceEEe----CCCC----HHHHHHHHHhhhhcCCCce
Confidence 888876 58999999999999998776643 35444443 2222 5777777753211123789
Q ss_pred EEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccc---------cccccCccEEEEcCcccCcCCCCcEE
Q 012991 193 LAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKI---------DVKEIGADFYVSNLHKWFFCPPSVAF 263 (452)
Q Consensus 193 lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~---------~~~~~~~d~~~~s~~K~l~g~~G~G~ 263 (452)
+|++++++|++|.+.|+++|+++|++||+ ++|+|++|+.|.... +.. .++|++++|+||++.|+. .|+
T Consensus 173 ~v~~~~v~~~tG~~~~l~~i~~la~~~~~-~li~De~~~~g~~~~~~~~~~~~~~~~-~~~di~~~s~sK~l~g~r-~G~ 249 (393)
T TIGR01822 173 LIATDGVFSMDGVIAPLDEICDLADKYDA-LVMVDECHATGFLGPTGRGSHELCGVM-GRVDIITGTLGKALGGAS-GGF 249 (393)
T ss_pred EEEEeCCccCCCCcCCHHHHHHHHHHcCC-EEEEECCccccCcCCCCCchHHhcCCC-CCCeEEEEEChHHhhCCC-cEE
Confidence 99999999999999999999999999999 799999998775422 111 257999999999977666 499
Q ss_pred EEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcC
Q 012991 264 LYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWG 343 (452)
Q Consensus 264 l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~ 343 (452)
+++++++++. +. .... ...+.++.+...+.+..++++.+. +.+.++++++++++++.+.|.+. +
T Consensus 250 ~~~~~~~~~~-l~-~~~~---------~~~~~~~~~~~~~~a~~~al~~~~----~~~~~~~~~~~~~~~l~~~L~~~-g 313 (393)
T TIGR01822 250 TTARKEVVEL-LR-QRSR---------PYLFSNSLPPAVVGASIKVLEMLE----ASNELRDRLWANTRYFRERMEAA-G 313 (393)
T ss_pred EEeCHHHHHH-HH-HhCc---------cceecCCCCHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHHHHHc-C
Confidence 9888877764 21 1100 001113333333344455565543 35677888999999999999876 7
Q ss_pred CCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEeccccc
Q 012991 344 TSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVY 423 (452)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~ 423 (452)
+.+..+. +.++.+.++ +..+..++++.|.++ ||.+.....+.. ......+|++++.+
T Consensus 314 ~~~~~~~---~~~~~i~~~------~~~~~~~l~~~L~~~-gI~v~~~~~~~~-------------~~~~~~iRis~~~~ 370 (393)
T TIGR01822 314 FDIKPAD---HPIIPVMLY------DAVLAQRFARRLLEE-GIYVTGFFYPVV-------------PKGQARIRVQISAA 370 (393)
T ss_pred CCCCCCC---CCEEEEEeC------CHHHHHHHHHHHHHC-CeeEeeeCCCCC-------------CCCCceEEEEECCC
Confidence 7665332 345555554 234677899999775 999863222111 12235799999999
Q ss_pred CCHHHHHHHHHHHHHHHhc
Q 012991 424 NTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 424 ~t~~di~~l~~~l~~~~~~ 442 (452)
+|++||++++++|+++.++
T Consensus 371 ~t~edi~~~~~~l~~~~~~ 389 (393)
T TIGR01822 371 HTEEQLDRAVEAFTRIGRE 389 (393)
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 9999999999999998753
No 39
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.97 E-value=1.1e-29 Score=249.99 Aligned_cols=334 Identities=17% Similarity=0.138 Sum_probs=236.3
Q ss_pred eccCCCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhccc
Q 012991 43 INNGSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGF 122 (452)
Q Consensus 43 l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~ 122 (452)
|.+.+..+.|. +.+++..+.....+++.. + ....+..+++++.+++++|++ ++++++++|+++++..++.++....
T Consensus 25 ~~~~~~~~~~~-~~~a~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~la~~~g~~-~~~~~~~~g~~~~~~~~~~~~~~~~ 100 (373)
T TIGR03812 25 LGSMCTNPHPI-AVKAYDMFIETNLGDPGL-F-PGTKKIEEEVVGSLGNLLHLP-DAYGYIVSGGTEANIQAVRAAKNLA 100 (373)
T ss_pred EEEEeCCchHH-HHHHHHHHhhcCCCCccc-C-ccHHHHHHHHHHHHHHHhCCC-CCCeEEeccHHHHHHHHHHHHHHHH
Confidence 33333445554 577777765443333332 2 234567789999999999996 5788899999999888876653100
Q ss_pred ccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCC
Q 012991 123 TEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITS 201 (452)
Q Consensus 123 ~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n 201 (452)
. .-++|++|++++++|.+.... ++..|++++.++. +.++.+ ++++++.++ +++..+++.+++|
T Consensus 101 ~--~~~~g~~vl~~~~~h~~~~~~----~~~~G~~~~~v~~----~~~~~~d~~~l~~~l~------~~~~~vv~~~~~~ 164 (373)
T TIGR03812 101 R--EEKRTPNIIVPESAHFSFEKA----AEMLGLELRYAPL----DEDYTVDVKDVEDLID------DNTIGIVGIAGTT 164 (373)
T ss_pred h--ccCCCcEEEECCcchHHHHHH----HHHcCCeEEEEee----CCCCCcCHHHHHHHHh------hCcEEEEEECCCC
Confidence 0 014678999999999885444 4557999999954 333444 899999884 4554445445789
Q ss_pred CCcccccHHHHHHHHHHcCCCEEEEecccccCCc----------cccccccCccEEEEcCcccCcCCCCcEEEE-EecCc
Q 012991 202 MPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSI----------KIDVKEIGADFYVSNLHKWFFCPPSVAFLY-CRKSI 270 (452)
Q Consensus 202 ~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~----------~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~-~~~~~ 270 (452)
++|.+.|+++|.++|+++|+ ++|+|++|+.+.. .+++...++|++++|+|||..+|.+.|+++ .+++.
T Consensus 165 ~tG~~~~~~~i~~l~~~~~~-~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~ 243 (373)
T TIGR03812 165 ELGQIDDIEELSKIALENGI-YLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSKSY 243 (373)
T ss_pred CCCccCCHHHHHHHHHHcCC-eEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCHHH
Confidence 99999999999999999999 7999999975543 344444578999999999877776666555 45665
Q ss_pred cccCCC--CCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCC
Q 012991 271 LSSDMH--HPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGS 348 (452)
Q Consensus 271 ~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 348 (452)
++. +. .++. .+. .+..+.|+++...+.++.++++++.+. |++.+.++..++++++++.|.++ ++....
T Consensus 244 ~~~-l~~~~~~~---~~~---~~~~~~gt~~~~~~~~~~~~l~~l~~~--g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 313 (373)
T TIGR03812 244 LKY-LSVDAPYL---TVK---KQATITGTRSGASAAATYAVIKYLGRE--GYRKIVAECMENTRYLVEELKKI-GFEPVI 313 (373)
T ss_pred Hhh-hcccCccc---CCC---CCcceEeechhHHHHHHHHHHHHhCHH--HHHHHHHHHHHHHHHHHHHHHhC-CCeEEc
Confidence 553 21 1111 111 112234677777788888888887654 88999999999999999999987 554222
Q ss_pred CcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHH
Q 012991 349 PPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLED 428 (452)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~d 428 (452)
++ ..+++.|.++ +..++.+.|.++ ||.++.. ..++++|++++.++|++|
T Consensus 314 ~~--~~~~v~~~~~---------~~~~v~~~L~~~-gi~v~~~-------------------~~~~~iRis~~~~~t~ed 362 (373)
T TIGR03812 314 EP--VLNIVAFEVD---------DPEEVRKKLRDR-GWYVSVT-------------------RCPKALRIVVMPHVTREH 362 (373)
T ss_pred CC--CceEEEEEeC---------CHHHHHHHHHHC-CceeccC-------------------CCCCEEEEEEECCCCHHH
Confidence 22 2567778775 235788999775 9998532 124689999999999999
Q ss_pred HHHHHHHHHH
Q 012991 429 YEKFRDAVIL 438 (452)
Q Consensus 429 i~~l~~~l~~ 438 (452)
+++++++|++
T Consensus 363 id~l~~~L~~ 372 (373)
T TIGR03812 363 IEEFLEDLKE 372 (373)
T ss_pred HHHHHHHHhh
Confidence 9999999976
No 40
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.97 E-value=1.8e-29 Score=250.73 Aligned_cols=352 Identities=18% Similarity=0.174 Sum_probs=234.6
Q ss_pred CCCCeEEeccCCCCCCcHHHHHHHHHHHHHHhcCCchh--hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHH
Q 012991 36 HQHGVARINNGSFGSCPKSVLADQQKWQLKFLQQPDDF--YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAI 113 (452)
Q Consensus 36 ~~~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~ 113 (452)
.+.++++|+.+.++..++.+.++..........+.... ...+..+..+++++++++++|++ .++++++++|+++.+.
T Consensus 18 ~~~~~~~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~-~~~v~~~~~g~~~~~~ 96 (398)
T cd00613 18 LDQSMSFLGSGTYKHNPPAVIKRNILENEFYTAYTPYQPEISQGRLQALFELQTMLCELTGMD-VANASLQDEATAAAEA 96 (398)
T ss_pred cccCcccccccccCCcCcHHHHHHhccccCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCC-ccceeccCchHHHHHH
Confidence 45677999999999655555555333221100111000 02345577889999999999985 5677777766655444
Q ss_pred HHHHhhcccccCCCCC--CCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCc
Q 012991 114 VLQQIGRGFTEGRFHR--NDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKM 190 (452)
Q Consensus 114 ~~~~l~~~~~~~~~~~--g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~ 190 (452)
++.++. ..+ ||+|+++++.|+++...+..+.+..|.+++.++. ++++.+ ++++++++ +++
T Consensus 97 ~~~~~~-------~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~----~~~~~~d~~~l~~~i------~~~ 159 (398)
T cd00613 97 AGLAAI-------RAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPS----DEGGTVDLEALKEEV------SEE 159 (398)
T ss_pred HHHHHH-------hcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEecc----CCCCCcCHHHHHHhc------CCC
Confidence 444332 244 8999999999999988887765555689988854 333344 88999988 678
Q ss_pred eEEEEEeccCCCCcccccH-HHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCC-----CCcEEE
Q 012991 191 IRLAIIDHITSMPCVVIPV-RKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCP-----PSVAFL 264 (452)
Q Consensus 191 ~~lv~~~~~~n~tG~~~~l-~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~-----~G~G~l 264 (452)
+++|++++++ ++|.+.|+ ++|+++|+++|+ ++|+|++|+.+....+...+++|++++|+|||+ +| +|+|++
T Consensus 160 t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~-~livD~~~~~~~~~~~~~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l 236 (398)
T cd00613 160 VAALMVQYPN-TLGVFEDLIKEIADIAHSAGA-LVYVDGDNLNLTGLKPPGEYGADIVVGNLQKTG-VPHGGGGPGAGFF 236 (398)
T ss_pred eEEEEEECCC-CCceecchHHHHHHHHHhcCC-EEEEEeccccccCCCChHHcCCCEEEeeccccC-CCCCCCCCceeEE
Confidence 9999999985 79999985 999999999999 799999988776666666678999999999986 43 557899
Q ss_pred EEecCccccCCCCCceeccCCC-----Ccc--------cccccccccCcc-----ccccHHHHHHHHHHhhcCHHHHHHH
Q 012991 265 YCRKSILSSDMHHPVVSHEFGN-----GLP--------IESAWIGTRDYS-----AQLVIPSAVTFVSRFEGGIDGIMQR 326 (452)
Q Consensus 265 ~~~~~~~~~~l~~~~~~~~~~~-----~~~--------~~~~~~~~~~~~-----~~~~~~~al~~~~~~~~g~~~~~~~ 326 (452)
++++++++. + .+....+... ... ....+.++++.. ...+...++..+.. .|+++++++
T Consensus 237 ~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~--~g~~~~~~~ 312 (398)
T cd00613 237 AVKKELVRF-L-PGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGP--EGLKEIAER 312 (398)
T ss_pred EEhhhhHhh-C-CCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCH--HHHHHHHHH
Confidence 998877764 2 2221100000 000 000112333222 11122223333333 378889999
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCC
Q 012991 327 NHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGAR 406 (452)
Q Consensus 327 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~ 406 (452)
.+++++++++.|.++++... +.......+++.++.. .+.++.++++.|.++ ||.+.... .
T Consensus 313 ~~~~~~~l~~~L~~~~~~~~--~~~~~~~~v~~~~~~~----~~~~~~~~~~~L~~~-gi~~~~~~-~------------ 372 (398)
T cd00613 313 AHLNANYLAKRLKEVGGVLP--FNGPFFHEFVLRLPPL----YGIRAEDLAKALIDG-GFHAPTMY-L------------ 372 (398)
T ss_pred HHHHHHHHHHHHHhcCCccc--CCCCeeEEEEEEcCCc----chHHHHHHHHhhhhc-Cccccccc-c------------
Confidence 99999999999998754432 2222244566776510 034677899999764 99864321 1
Q ss_pred CCCCCccceEEecccccCCHHHHHHHHHHH
Q 012991 407 DKDGIITGYARISHQVYNTLEDYEKFRDAV 436 (452)
Q Consensus 407 ~~~~~~~~~iRis~~~~~t~~di~~l~~~l 436 (452)
...+.+|++++.++|++|||+++++|
T Consensus 373 ----~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 373 ----PVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred ----CCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 13478999999999999999999864
No 41
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.97 E-value=2.3e-30 Score=252.19 Aligned_cols=296 Identities=14% Similarity=0.087 Sum_probs=219.9
Q ss_pred hhhhHHHHHHHHHHHhHhCCC-CCCcEEEecChhHHHHHHHHHhhccccc----CCCCC--CCEEEEeCCcchhHHHHHH
Q 012991 76 NSLRKGILESRAAVKDLINAD-DVGEISLVDNATTAAAIVLQQIGRGFTE----GRFHR--NDTVLMLHCAFQAVKKSIQ 148 (452)
Q Consensus 76 ~~~~~~~~~~~~~la~~~~~~-~~~~i~~t~g~t~a~~~~~~~l~~~~~~----~~~~~--g~~Vl~~~~~~~s~~~~~~ 148 (452)
....++.+++++++++++|.+ +.++++||+|||+|+.+++.++...+.. ....+ +..|++++++|.++..++.
T Consensus 34 ~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~ 113 (345)
T cd06450 34 PAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAA 113 (345)
T ss_pred chhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHH
Confidence 345667788899999999985 3568999999999999999887432110 00012 3478888999998766654
Q ss_pred HHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEe
Q 012991 149 AYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVD 227 (452)
Q Consensus 149 ~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD 227 (452)
. .|.+++.+++ ++++.+ +++|++.+++....+.++++|++++++|++|.+.|+++|+++|+++|+ ++|+|
T Consensus 114 ~----~g~~~~~v~~----~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~-~l~vD 184 (345)
T cd06450 114 Y----LDVKVRLVPV----DEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDL-WLHVD 184 (345)
T ss_pred H----HhcCeEEeee----CCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCC-eEEEe
Confidence 4 4889999854 333445 899999886432223478999999999999999999999999999999 69999
Q ss_pred cccccCCccccccc------cCccEEEEcCcccCcCCCCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCcc
Q 012991 228 AAHAMGSIKIDVKE------IGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYS 301 (452)
Q Consensus 228 ~a~~~g~~~~~~~~------~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (452)
++++.+..+.+... .++|++++|+|||+++|.|+|+++++
T Consensus 185 ~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~---------------------------------- 230 (345)
T cd06450 185 AAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR---------------------------------- 230 (345)
T ss_pred chhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH----------------------------------
Confidence 99998876543221 26899999999998899998887654
Q ss_pred ccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHh
Q 012991 302 AQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLR 381 (452)
Q Consensus 302 ~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 381 (452)
.+++.++++.+... |+++++++..++++++.+.|.+++++.+..++. .+++.|.++... ..+.+..++.+.|.
T Consensus 231 -~~~~~~~l~~l~~~--g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~~iv~f~~~~~~--~~~~~~~~i~~~L~ 303 (345)
T cd06450 231 -ALKLWATLRRFGRD--GYGEHIDRIVDLAKYLAELIRADPGFELLGEPN--LSLVCFRLKPSV--KLDELNYDLSDRLN 303 (345)
T ss_pred -HHHHHHHHHHHhHH--HHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCc--eeEEEEEECCcc--hhhHHHHHHHHHHH
Confidence 33445567776654 889999999999999999999988877665443 668888876200 00356678999997
Q ss_pred hhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEeccccc-CCHHHHHHHHHHHHH
Q 012991 382 VRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVY-NTLEDYEKFRDAVIL 438 (452)
Q Consensus 382 ~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~-~t~~di~~l~~~l~~ 438 (452)
++ |+.+...... ..++++|++++.+ +|.+|+++++++|++
T Consensus 304 ~~-g~~~~~~~~~----------------~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 304 ER-GGWHVPATTL----------------GGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred hc-CCEEEEeeEE----------------CCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 65 5544322221 1246899999976 599999999999976
No 42
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.97 E-value=4.1e-30 Score=250.08 Aligned_cols=338 Identities=14% Similarity=0.131 Sum_probs=237.8
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEe-cChhHHHHHHHHHhhcccccC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLV-DNATTAAAIVLQQIGRGFTEG 125 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t-~g~t~a~~~~~~~l~~~~~~~ 125 (452)
++...|+.|++++....... -+..+.+..+.+.++++++.+++++++++..+|+|+ +|||.+++.++.++.
T Consensus 10 GP~~~~~~v~~a~~~~~~~~--~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~------ 81 (361)
T TIGR01366 10 GPSKVRLEQLQALTTTAASL--FGTSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLI------ 81 (361)
T ss_pred CCcCCCHHHHHHHHhcCccc--cccCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcc------
Confidence 35556666888866321000 012345567789999999999999999644578886 569999999999772
Q ss_pred CCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcc
Q 012991 126 RFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCV 205 (452)
Q Consensus 126 ~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~ 205 (452)
. ++.+++...+|.+....+..++...+ ++..++.++. +.++..+ ++++++|.++|.+|.||.
T Consensus 82 --~-~~~l~i~~G~~~~~~~~~a~~~~~~~-~~~~~~~~~~--------~~~~~~~------~~~~~lV~~~h~et~tG~ 143 (361)
T TIGR01366 82 --E-KKSLHLSFGEFSSKFAKAVKLAPWLG-EPIIVTADPG--------SAPEPQA------DPGVDVIAWAHNETSTGV 143 (361)
T ss_pred --c-ccccEEecCHHHHHHHHHHHhhhccC-CceEEecCCC--------CCCCCcc------CCCCCEEEEcccCCccce
Confidence 2 24445556777665444433222233 6677754321 1122223 578999999999999999
Q ss_pred cccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCccccCCCCCceec---
Q 012991 206 VIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMHHPVVSH--- 282 (452)
Q Consensus 206 ~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~~~~~~~--- 282 (452)
+.|+++| +|++|+ +++||+++++|+.++|++. +|++++|+||++++++|+++++++++.+++ + .+....
T Consensus 144 ~~pi~~I---~~~~g~-~~iVDavqs~g~~~idv~~--~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~-~-~~~~~~~~~ 215 (361)
T TIGR01366 144 AVPVRRP---EGSDDA-LVVIDATSGAGGLPVDIAE--TDVYYFAPQKNFASDGGLWLAIMSPAALER-I-EAIAASGRW 215 (361)
T ss_pred ecccccc---cccCCC-eEEEEcCccccCCCCCHHH--CCEEEEEchhhcCCCCceEEEEECHHHHhh-h-hcccCCCCC
Confidence 9999988 588999 8999999999999999985 899999999987777788888889988765 2 221100
Q ss_pred --cC-CCC--cc--cccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCC-ccccc
Q 012991 283 --EF-GNG--LP--IESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSP-PEICA 354 (452)
Q Consensus 283 --~~-~~~--~~--~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~ 354 (452)
.+ ... .. ....+.++++...++++.++++++.+. +|++.+.++.+++++++++.|.+.++++++.. ....+
T Consensus 216 ~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~-gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s 294 (361)
T TIGR01366 216 VPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGN-GGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRS 294 (361)
T ss_pred CchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHc-cCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcc
Confidence 00 000 00 011235677777778999999999873 46999999999999999999999865665432 21112
Q ss_pred -ceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHH
Q 012991 355 -AMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFR 433 (452)
Q Consensus 355 -~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~ 433 (452)
.+..+.++ ++.+..++.+.|.++ ||.+..++.. ..++.+|+|++.++|.+||++++
T Consensus 295 ~~v~~v~~~------~g~~~~~v~~~L~~~-gI~i~~~~~~----------------l~~~~vRis~~~~~t~~di~~l~ 351 (361)
T TIGR01366 295 QVVGTIDFV------DDIDAATVAKILRAN-GIVDTEPYRK----------------LGRNQLRVAMFPAIDPDDVEALT 351 (361)
T ss_pred cceEEEECC------CccCHHHHHHHHHHC-CCeeccCccc----------------cCCCcEEEEcCCCCCHHHHHHHH
Confidence 22334444 367888999999765 9998543321 22468999999999999999999
Q ss_pred HHHHHHHhc
Q 012991 434 DAVILLVEE 442 (452)
Q Consensus 434 ~~l~~~~~~ 442 (452)
++|++++++
T Consensus 352 ~al~~~~~~ 360 (361)
T TIGR01366 352 ECVDWVVER 360 (361)
T ss_pred HHHHHHHhh
Confidence 999998753
No 43
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.97 E-value=6.1e-29 Score=243.80 Aligned_cols=355 Identities=18% Similarity=0.145 Sum_probs=238.2
Q ss_pred CCeEEeccCC-CCCCcHHHHHHHHHHHHHHhcCC--chhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHH
Q 012991 38 HGVARINNGS-FGSCPKSVLADQQKWQLKFLQQP--DDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIV 114 (452)
Q Consensus 38 ~~~~~l~~~~-~~~~p~~v~e~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~ 114 (452)
++-++||.-. .|..++.+.+++.++.....+.. .........+.+.++++.+|+++|++ .+.+++|+++++..+
T Consensus 6 ~~~~~~~~~~~~g~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g~~---~~~i~~g~~~a~~~~ 82 (370)
T TIGR02539 6 RGSINLNPLQRGGVLTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFLGMD---EARVTHGAREGKFAV 82 (370)
T ss_pred ccccccChhhhCCCCcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHhCCC---ceEEECChHHHHHHH
Confidence 4556666544 45788888888888754221100 01111223446788899999999995 567789999999999
Q ss_pred HHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhcccc-CCCceE
Q 012991 115 LQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKK-DGKMIR 192 (452)
Q Consensus 115 ~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~-~~~~~~ 192 (452)
+.++ .++||+|+++.+.|.+.+.+ ++..|++++.++.. .+..+.+ +++|++.+++... ..++++
T Consensus 83 ~~~l--------~~~gd~Vl~~~~~h~s~~~~----~~~~g~~~~~~~~~--~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 148 (370)
T TIGR02539 83 MHAL--------CKEGDWVVLDGLAHYTSYVA----AERAGLNVKEVPHT--GHPEYKVDPEGYGEVIEEVEDESGKPPV 148 (370)
T ss_pred HHHh--------hCCCCEEEECCcccHHHHHH----HHHcCCEEEEEecC--CcccCCcCHHHHHHHHHHhhhccCCCcE
Confidence 9987 48899999999999887644 46679999999642 1122334 8889888853211 014688
Q ss_pred EEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCccc
Q 012991 193 LAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILS 272 (452)
Q Consensus 193 lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~ 272 (452)
+|++++++|++|.+.|+++|.++|+++|+ ++++|++|+.|..+.+...+++|+++.|+|||++++.++|++++++++++
T Consensus 149 lv~~~~p~~~~G~~~~l~~i~~la~~~~~-~livDea~~~g~~~~~~~~~~~di~v~s~sK~~~~~g~~G~l~~~~~~i~ 227 (370)
T TIGR02539 149 LALLTHVDGEYGNLPDAGKVAKVCREKGV-PLLLNCAYTVGRMPVSAKEIGADFIVGSGHKSMAASGPCGVLGMSEEWED 227 (370)
T ss_pred EEEEECCCCCCccccCHHHHHHHHHHcCC-eEEEECccccCCcCCCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHh
Confidence 99999999999999999999999999999 79999999999777666666789999999999765555899999998887
Q ss_pred cCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCccc
Q 012991 273 SDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEI 352 (452)
Q Consensus 273 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 352 (452)
. +. ....+ +..... ..+.++....+..++.++++...+ .++...+. .++++++++.|.++ |++++.....
T Consensus 228 ~-l~-~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~al~~~~~---~l~~~~~~-~~~~~~l~~~L~~~-g~~~~~~~~s 297 (370)
T TIGR02539 228 I-VL-RKSRY-SPVKEV--ELLGCTSRGAPIVTMMASFPHVVE---RVKRWDEE-VKKTRWFVAELEDI-GFIQLGQKPK 297 (370)
T ss_pred h-hc-ccccC-Ccccee--eeecccccccHHHHHHHHHHHHHH---HHHHHHHH-HHHHHHHHHHHHhC-CcEEEccCCC
Confidence 6 22 11111 111110 011123333344444445544332 23333333 44467899999887 7765322222
Q ss_pred ccceEEEEcCCccc--cCChhhHHHHHHHHhhhcceE-eeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHH
Q 012991 353 CAAMVMVGLPSRLR--VMGEDDALRLRGHLRVRFGVE-VPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDY 429 (452)
Q Consensus 353 ~~~~~~~~~~~~~~--~~~~~~~~~l~~~L~~~~gI~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di 429 (452)
.++++++.+|.... ..+..+...+.+.|.++ ||. ++. ..++++|+++. ..|.+|+
T Consensus 298 ~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~-GI~~ir~--------------------~~~~~iRis~~-~~t~e~i 355 (370)
T TIGR02539 298 EHDLVKFETPGFHEIAQKHKRRGYFLYEELKKR-GIHGIRS--------------------GQTKYFKLSVY-GLTKEQV 355 (370)
T ss_pred cCceEEEECCchhHHhhhhccccHHHHHHHHhC-CCccccC--------------------CcceEEEEEec-CCCHHHH
Confidence 37788887752100 01112345788999775 996 431 12359999984 3599999
Q ss_pred HHHHHHHHHHHhc
Q 012991 430 EKFRDAVILLVEE 442 (452)
Q Consensus 430 ~~l~~~l~~~~~~ 442 (452)
++++++|++++++
T Consensus 356 ~~l~~~L~~~~~~ 368 (370)
T TIGR02539 356 EYVVDSFEEIVEE 368 (370)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998764
No 44
>PLN03032 serine decarboxylase; Provisional
Probab=99.97 E-value=2.3e-29 Score=242.76 Aligned_cols=329 Identities=14% Similarity=0.088 Sum_probs=244.4
Q ss_pred eEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhh--hhhhhHHHHHHHHHHHhHhCCCCCCcE--EEecChhHHHHHH
Q 012991 40 VARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFY--FNSLRKGILESRAAVKDLINADDVGEI--SLVDNATTAAAIV 114 (452)
Q Consensus 40 ~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~la~~~~~~~~~~i--~~t~g~t~a~~~~ 114 (452)
-.+++.+... ..+. +++.+..+.....++|+... +....+..+++++.+++++|++ ++++ +||+|||+|+..+
T Consensus 24 ~~~~gy~~~~~~~~~-~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~-~~~~~G~fTsGGTEaNl~a 101 (374)
T PLN03032 24 SVHFGYPYNLDFDYG-ELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELE-KDEYWGYITTCGTEGNLHG 101 (374)
T ss_pred hhccCCCchhccChH-HHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCC-CccCCEEEeCchHHHHHHH
Confidence 3455544433 3443 78888887766667777643 3466889999999999999996 5555 9999999999988
Q ss_pred HHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEE
Q 012991 115 LQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRL 193 (452)
Q Consensus 115 ~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~l 193 (452)
+.+.. . ..++..|+++..+|+|+.+++.. .|.+++.+ |.+.++.+ +++|+++|++. ..+|.+
T Consensus 102 l~~ar-~-----~~~~~~vi~s~~~H~Sv~kaa~~----lg~~~~~V----~~d~~g~id~~~L~~~i~~~---~~~~~l 164 (374)
T PLN03032 102 ILVGR-E-----VFPDGILYASRESHYSVFKAARM----YRMEAVKV----PTLPSGEIDYDDLERALAKN---RDKPAI 164 (374)
T ss_pred HHHHH-H-----hCCCcEEEeCCCceeHHHHHHHH----cCCCCeEe----eeCCCCcCcHHHHHHHHHHc---CCCCEE
Confidence 87542 1 13446899999999999888655 47788888 45666777 99999999642 336889
Q ss_pred EEEeccCCCCcccccHHHHHHHHHHcC-----CCEEEEecccccCCccc-------cccccCccEEEEcCcccCcCCCCc
Q 012991 194 AIIDHITSMPCVVIPVRKLVKICRDEG-----VDQVFVDAAHAMGSIKI-------DVKEIGADFYVSNLHKWFFCPPSV 261 (452)
Q Consensus 194 v~~~~~~n~tG~~~~l~~i~~l~~~~~-----~~~~ivD~a~~~g~~~~-------~~~~~~~d~~~~s~~K~l~g~~G~ 261 (452)
|+++..+|.+|.+.|+++|+++|+++| + ++|+|+|++.+..++ ++. .++|++++|+||+++.|.|+
T Consensus 165 vv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~-~lHvDaA~gg~~~p~~~~~~~~~~~-~~vDSis~s~HK~~g~P~g~ 242 (374)
T PLN03032 165 LNVNIGTTVKGAVDDLDRILRILKELGYTEDRF-YIHCDGALFGLMMPFVSRAPEVTFR-KPIGSVSVSGHKFLGCPMPC 242 (374)
T ss_pred EEEEecCcCCccCCCHHHHHHHHHHhCCCCCCe-eEEEEccchhhhhhccCCCcccCCC-cCCcEEEECcccccCCCcCe
Confidence 999999999999999999999999996 6 499999999887764 443 36999999999975559999
Q ss_pred EEEEEecCccccCC--CCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHH
Q 012991 262 AFLYCRKSILSSDM--HHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLA 339 (452)
Q Consensus 262 G~l~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~ 339 (452)
|+++++++.+.. + ..+|+.. .+....|+.+....+.++..+..+..- |+.++.+++.++++++.+.|.
T Consensus 243 G~ll~r~~~~~~-~~~~~~Yl~~-------~d~ti~gSR~g~~~l~~w~~l~~~G~~--g~~~~~~~~~~~a~~l~~~l~ 312 (374)
T PLN03032 243 GVALTRKKHVKA-LSQNVEYLNS-------RDATIMGSRNGHAPLYLWYTLRRKGYR--GIKRDVQHCMRNAHYLKDRLT 312 (374)
T ss_pred EEEEEEchhhHh-hccCCcccCC-------CCCcccCCCchHHHHHHHHHHHHhCHH--HHHHHHHHHHHHHHHHHHHHH
Confidence 999999877653 2 1222211 112334666666667777777777653 888999999999999999998
Q ss_pred HHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEec
Q 012991 340 NAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARIS 419 (452)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis 419 (452)
+. ++++...+. ..+++|.-| .... + .+ |+.+. ..++++|++
T Consensus 313 ~~-~~~~~~~p~--~~~V~f~~~---------~~~~----~-~~-~w~l~---------------------~~~~~~hi~ 353 (374)
T PLN03032 313 EA-GLTCRLNEL--SSTVVFERP---------MDEA----F-IK-KWQLA---------------------CEGDIAHVV 353 (374)
T ss_pred hC-CCcEEECCC--ceEEEEcCC---------CcHh----H-hh-eeeec---------------------ccCCEEEEE
Confidence 86 766544443 557777654 1111 3 23 66553 123589999
Q ss_pred ccccCCHHHHHHHHHHHHH
Q 012991 420 HQVYNTLEDYEKFRDAVIL 438 (452)
Q Consensus 420 ~~~~~t~~di~~l~~~l~~ 438 (452)
+...++.+.++++++.|++
T Consensus 354 vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 354 VMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred ECCCCCHHHHHHHHHHHhc
Confidence 9998999999999999875
No 45
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.97 E-value=5e-29 Score=243.99 Aligned_cols=344 Identities=19% Similarity=0.164 Sum_probs=238.0
Q ss_pred CCCCcHHHHHHHHHHHHHHhcCCch---hhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhccccc
Q 012991 48 FGSCPKSVLADQQKWQLKFLQQPDD---FYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTE 124 (452)
Q Consensus 48 ~~~~p~~v~e~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~ 124 (452)
.++..+.+.+++..+...+ ++++. .......+...++++.+++++|+ +++++|+|+|+++.+++.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~---~~i~~~~g~t~al~~~l~~~------ 79 (361)
T cd06452 10 GGRLTPEARKALIEWGDGY-SVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM---DEARVTPGAREGKFAVMHSL------ 79 (361)
T ss_pred CCCCCHHHHHHHHHHhccc-CCccccccccccccCchHHHHHHHHHHHcCC---ceEEEeCCHHHHHHHHHHHh------
Confidence 4477777888888877433 33322 11222345689999999999998 58999999999999999876
Q ss_pred CCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhcccc-CCCceEEEEEeccCCC
Q 012991 125 GRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKK-DGKMIRLAIIDHITSM 202 (452)
Q Consensus 125 ~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~-~~~~~~lv~~~~~~n~ 202 (452)
+++||+|+++.++|.+.... +...|++++.++.+. +.++.+ ++++++++++... .++++++|++++++|+
T Consensus 80 --~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v~~~~--~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~ 151 (361)
T cd06452 80 --CEKGDWVVVDGLAHYTSYVA----AERAGLNVREVPNTG--HPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGN 151 (361)
T ss_pred --cCCCCEEEEcCCcchHHHHH----HHhcCCEEEEEecCC--CCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCC
Confidence 58899999999999887644 456799999996521 111244 8888888853210 0147899999999999
Q ss_pred CcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCccccCCCCCceec
Q 012991 203 PCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMHHPVVSH 282 (452)
Q Consensus 203 tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~~~~~~~ 282 (452)
+|...|+++|.++|+++|+ ++++|++++.|..+++...+++|++++|+||+++++.++|++++++++++. +.... ..
T Consensus 152 tG~~~~~~~i~~~~~~~~~-~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~~~~~~-l~~~~-~~ 228 (361)
T cd06452 152 YGNLHDAKKIAKVCHEYGV-PLLLNGAYTVGRMPVSGKELGADFIVGSGHKSMAASAPIGVLATTEEWADI-VFRTS-QM 228 (361)
T ss_pred CeeeccHHHHHHHHHHcCC-eEEEECCcccCCcCCCHHHcCCCEEEecCCccccCCCCeEEEEECHHHHHH-Hhccc-cc
Confidence 9999999999999999999 799999999998888877778999999999998777779999998877765 21111 00
Q ss_pred cCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcC
Q 012991 283 EFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLP 362 (452)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 362 (452)
++... ...+.+++....++++.++++...+ ..+.+.+ ..++++++++.|.+++|++++.+.....+++.+..+
T Consensus 229 -~~~~~--~~~~~~~~~~~~~~~~~~al~~~~~---~~~~~~~-~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~ 301 (361)
T cd06452 229 -FKIKE--VELLGCTLRGAPLVTLMASFPHVKE---RVKRWDE-EVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETP 301 (361)
T ss_pred -cccce--eeeeccccCchHHHHHHHHHHHHHH---HHHHHHH-HHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcC
Confidence 11110 0112233333344455555555443 2333333 345568899999988888776433233667777664
Q ss_pred Ccccc--CChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHH
Q 012991 363 SRLRV--MGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLV 440 (452)
Q Consensus 363 ~~~~~--~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~ 440 (452)
.-... ....++.++.+.|.++ ||.+. . .....++|++... .+++|++.++++|+++.
T Consensus 302 ~~~~~~~~~~~~~~~~~~~L~~~-gI~~~----~---------------~~~~~~~ri~~~g-~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 302 SFDEIAKKHKRRGYFLYSELKKR-GIHGI----K---------------PGLTRYFKLSTYG-LTWEQVEYVVDAFKEIA 360 (361)
T ss_pred CcchhhhhccccchhHHHHHHHc-CceEE----c---------------CCCceEEEEEecC-CCHHHHHHHHHHHHHHh
Confidence 10000 0012234688999765 99852 1 1224589999944 58999999999999765
No 46
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.97 E-value=7.1e-28 Score=215.74 Aligned_cols=361 Identities=18% Similarity=0.180 Sum_probs=283.3
Q ss_pred HHHHHhhhccCCCCeEEeccCCCCCCc-HHHHHHHHHHHHHHhcCCchh-h--hhhhhHHHHHHHHHHHhHhCCCCCCcE
Q 012991 26 EAEIRDEFSHHQHGVARINNGSFGSCP-KSVLADQQKWQLKFLQQPDDF-Y--FNSLRKGILESRAAVKDLINADDVGEI 101 (452)
Q Consensus 26 ~~~ir~~~~~~~~~~~~l~~~~~~~~p-~~v~e~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~la~~~~~~~~~~i 101 (452)
....|++|. .-.++|||+.++.|..| .......+.....|....... + ...+..+-+.+-.+++.++|+. ..++
T Consensus 19 l~~lr~~f~-lp~~viyLdgnSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~-~~Ev 96 (407)
T COG3844 19 LAKLRDRFA-LPGGVIYLDGNSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGAR-AGEV 96 (407)
T ss_pred hhhhHhhcc-CCCCeEEeeccccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhcCC-CCce
Confidence 466788886 56789999999999888 544444555555554333332 2 2455667788999999999996 7899
Q ss_pred EEecChhHHHHHHHHHhhcccccCCCCCCCEEEEe-CCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHH
Q 012991 102 SLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLML-HCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKK 179 (452)
Q Consensus 102 ~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~-~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~ 179 (452)
+++.+.+--++.++.+..| ..+|+.||++ ..+|++-.++++-++...+.... -...+ ++++++
T Consensus 97 vv~dtts~nl~k~L~aalr------~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~~~---------~~~~~~P~~~~~ 161 (407)
T COG3844 97 VVTDTTSINLFKVLAAALR------PQEGRRVIVSEGDNFPTDLYIAEGLADLLGIGYD---------LEGVIAPRALEE 161 (407)
T ss_pred EEeCCcchHHHHHHHHHhc------cCCCceEEeecCCCCCcchhhhcchhhhhccccc---------ceeeeChHHHHH
Confidence 9999888777777776642 4557777776 55788888888777766664321 12223 678999
Q ss_pred HHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCC
Q 012991 180 GIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPP 259 (452)
Q Consensus 180 ~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~ 259 (452)
++ +.++.+|++++.+.-||...++.+|..++|++|+ +++-|-+|+.|.+++++...++||.+.+.+|+|+|++
T Consensus 162 ~~------~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~ga-lv~wDLAHsaGavp~~Lh~~gaDfaigcsyKYLNgGP 234 (407)
T COG3844 162 AI------TDDVAVVLLSHVNYKTGQLLDMRAITALAHQHGA-LVGWDLAHSAGAVPVDLHAAGADFAIGCSYKYLNGGP 234 (407)
T ss_pred hh------ccceEEEEeccccccccceeeHHHHHHHHHhcCc-eEEeehhcccCCcceeecccCCCeeeeeeceeccCCC
Confidence 99 7899999999999999999999999999999999 9999999999999999999999999999999998877
Q ss_pred C-cEEEEEecCccccCCCCCceeccCCCCcc------------cccccccccCccccccHHHHHHHHHHhhcCHHHHHHH
Q 012991 260 S-VAFLYCRKSILSSDMHHPVVSHEFGNGLP------------IESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQR 326 (452)
Q Consensus 260 G-~G~l~~~~~~~~~~l~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~ 326 (452)
| .+++++.++..+. ..++. +.|+|...+ ...+..|++++.+..++..+++.+... ++.+++++
T Consensus 235 Gapa~l~v~~~h~e~-~~~~l-sgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~--~i~~lR~k 310 (407)
T COG3844 235 GAPAGLFVAPRHRER-SWPPL-SGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADV--DITELRKK 310 (407)
T ss_pred CCceeEEeccccccc-ccccc-ccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhc--CHHHHHHh
Confidence 6 8899998888876 33333 334443221 234567899999999999999999987 89999999
Q ss_pred HHHHHHHHHHHHHHHc---CCCcCCCc--ccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCC
Q 012991 327 NHEQALKMARMLANAW---GTSLGSPP--EICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQP 401 (452)
Q Consensus 327 ~~~~~~~l~~~L~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~ 401 (452)
...+++++.+.++..- ++.+..|. +.++..+.+..| ...++++.|.++ ||...
T Consensus 311 SlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp---------~~~~V~qaLi~r-GVigD------------ 368 (407)
T COG3844 311 SLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHP---------HGYQVMQALIDR-GVIGD------------ 368 (407)
T ss_pred hhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecC---------cHHHHHHHHHHc-Ccccc------------
Confidence 9999999999887642 45666664 346888888876 667899999775 99863
Q ss_pred CCCCCCCCCCccceEEecc-cccCCHHHHHHHHHHHHHHHhccc
Q 012991 402 QAGARDKDGIITGYARISH-QVYNTLEDYEKFRDAVILLVEEGQ 444 (452)
Q Consensus 402 ~~~~~~~~~~~~~~iRis~-~~~~t~~di~~l~~~l~~~~~~~~ 444 (452)
...++.+|+.+ ..|++.+||...++.|.++++..+
T Consensus 369 --------~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~a 404 (407)
T COG3844 369 --------FREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTLA 404 (407)
T ss_pred --------ccCCCeeeecCccceechhHHHHHHHHHHHHHHhhc
Confidence 46678999998 577999999999999999997653
No 47
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.97 E-value=4.5e-28 Score=236.46 Aligned_cols=335 Identities=15% Similarity=0.156 Sum_probs=232.4
Q ss_pred eEEeccC-CCC-CCcHHHHHHHHHHHHHHhcCCchh-hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHH
Q 012991 40 VARINNG-SFG-SCPKSVLADQQKWQLKFLQQPDDF-YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQ 116 (452)
Q Consensus 40 ~~~l~~~-~~~-~~p~~v~e~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~ 116 (452)
+.||..+ ..| +.++.+.+++.+.+..+..+.+.. ......+..+++++.++++++++ + .+++++|++++..++.
T Consensus 3 ~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~-~iv~~sg~~a~~~~~~ 79 (349)
T cd06454 3 VLNFCSNDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKE--A-ALVFSSGYAANDGVLS 79 (349)
T ss_pred ceecccCCccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCC--C-EEEeccHHHHHHHHHH
Confidence 4455433 344 446789999999997653322221 12345677899999999999985 3 4666777888887777
Q ss_pred HhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEE
Q 012991 117 QIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAII 196 (452)
Q Consensus 117 ~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~ 196 (452)
++ +++||+|++++++|.++...+ +..|++++.++. .+ .+++++.+++.. ...++++|++
T Consensus 80 ~~--------~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~~~~----~~----~~~le~~i~~~~-~~~~~~~v~~ 138 (349)
T cd06454 80 TL--------AGKGDLIISDSLNHASIIDGI----RLSGAKKRIFKH----ND----MEDLEKLLREAR-RPYGKKLIVT 138 (349)
T ss_pred Hh--------cCCCCEEEEehhhhHHHHHHH----HHcCCceEEecC----CC----HHHHHHHHHHhh-ccCCCeEEEE
Confidence 65 478999999999999876554 446888887732 12 456666665321 0246789999
Q ss_pred eccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCcc--------ccccccCccEEEEcCcccCcCCCCcEEEEEec
Q 012991 197 DHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIK--------IDVKEIGADFYVSNLHKWFFCPPSVAFLYCRK 268 (452)
Q Consensus 197 ~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~--------~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~ 268 (452)
++++|++|...|+++|.++|+++|+ ++|+|++|+.|..+ .+....+.|+++.|+||+ ++++| |+++.++
T Consensus 139 ~~~~~~tG~~~~~~~i~~~~~~~~~-~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~~g-G~i~~~~ 215 (349)
T cd06454 139 EGVYSMDGDIAPLPELVDLAKKYGA-ILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKA-FGAVG-GYIAGSK 215 (349)
T ss_pred eccccCCCCccCHHHHHHHHHHcCC-EEEEEccccccccCCCCCChhhhccccccCcEEEeechhh-hcccC-CEEECCH
Confidence 9999999999999999999999999 89999999876543 222344689999999997 55566 7887777
Q ss_pred CccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCC
Q 012991 269 SILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGS 348 (452)
Q Consensus 269 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 348 (452)
++.+. + ..... ...+.++.+...++++.++++.+.+ .+.+++++.++++++.+.|.++ ++.+..
T Consensus 216 ~~~~~-~-~~~~~---------~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~l~~~-g~~~~~ 279 (349)
T cd06454 216 ELIDY-L-RSYAR---------GFIFSTSLPPAVAAAALAALEVLQG----GPERRERLQENVRYLRRGLKEL-GFPVGG 279 (349)
T ss_pred HHHHH-H-HHhch---------hhhccCCCCHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHHhc-CCcccC
Confidence 76553 1 11100 0001133444455566666666653 3567888999999999999886 666554
Q ss_pred CcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHH
Q 012991 349 PPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLED 428 (452)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~d 428 (452)
++. ..+.++..+ +..+..++.+.|.++ ||.+........ ....+++|++++.+++.+|
T Consensus 280 ~~~--~~~~~~~~~------~~~~~~~~~~~L~~~-gI~~~~~~~~~~-------------~~~~~~iRi~~~~~~~~~~ 337 (349)
T cd06454 280 SPS--HIIPPLIGD------DPAKAVAFSDALLER-GIYVQAIRYPTV-------------PRGTARLRISLSAAHTKED 337 (349)
T ss_pred CCC--CcEEEEeCC------ChHHHHHHHHHHHhC-CceEEEecCCcc-------------CCCCCeEEEEEeCCCCHHH
Confidence 433 334444443 234667899999876 999865322110 0124799999999999999
Q ss_pred HHHHHHHHHHH
Q 012991 429 YEKFRDAVILL 439 (452)
Q Consensus 429 i~~l~~~l~~~ 439 (452)
+++++++|+++
T Consensus 338 i~~~~~~l~~~ 348 (349)
T cd06454 338 IDRLLEALKEV 348 (349)
T ss_pred HHHHHHHHHHh
Confidence 99999999864
No 48
>PRK07179 hypothetical protein; Provisional
Probab=99.97 E-value=1e-27 Score=238.30 Aligned_cols=334 Identities=15% Similarity=0.170 Sum_probs=236.7
Q ss_pred CCCeEEeccCCCC--CCcHHHHHHHHHHHHHHhcCC--chhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHH
Q 012991 37 QHGVARINNGSFG--SCPKSVLADQQKWQLKFLQQP--DDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAA 112 (452)
Q Consensus 37 ~~~~~~l~~~~~~--~~p~~v~e~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~ 112 (452)
+..+++++...+- ...+.+.+++.+.+..+..++ ++.+ ....+...++++.+++++|.+ .+++++||++|+.
T Consensus 53 g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~-~~~~~~~~~le~~la~~~g~~---~~~~~~sG~~An~ 128 (407)
T PRK07179 53 GPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVF-LHDDSPKPQFEKKLAAFTGFE---SCLLCQSGWAANV 128 (407)
T ss_pred CCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccc-cCCchHHHHHHHHHHHHhCCC---cEEEECCHHHHHH
Confidence 3346677655433 334559999999887764433 2221 222346788889999999984 5688999999999
Q ss_pred HHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceE
Q 012991 113 IVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIR 192 (452)
Q Consensus 113 ~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~ 192 (452)
.++.++ ..+|+.|+++..+|.+....+ ...|.++..+ +..+ ++++++.+++ .+++
T Consensus 129 ~~l~~l--------~~~g~~v~~~~~~h~s~~~~~----~~~g~~~~~~----~~~d----~~~l~~~l~~-----~~~~ 183 (407)
T PRK07179 129 GLLQTI--------ADPNTPVYIDFFAHMSLWEGV----RAAGAQAHPF----RHND----VDHLRRQIER-----HGPG 183 (407)
T ss_pred HHHHHh--------CCCCCEEEEECCcCHHHHHHH----HHCCCeEEEe----cCCC----HHHHHHHHHh-----cCCe
Confidence 999987 467899999999999886554 3357777665 3222 6888888852 3578
Q ss_pred EEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccc---------cccccCccEEEEcCcccCcCCCCcEE
Q 012991 193 LAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKI---------DVKEIGADFYVSNLHKWFFCPPSVAF 263 (452)
Q Consensus 193 lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~---------~~~~~~~d~~~~s~~K~l~g~~G~G~ 263 (452)
+|++++++|++|.+.|+++|.++|+++|+ ++|+|++|+.|.... +.. .++|+++.|++|++ |+. +|+
T Consensus 184 lV~v~~v~n~tG~i~pl~~I~~l~~~~~~-~livDea~~~g~~g~~g~g~~~~~~~~-~~vdi~~~S~sK~~-g~~-~G~ 259 (407)
T PRK07179 184 IIVVDSVYSTTGTIAPLADIVDIAEEFGC-VLVVDESHSLGTHGPQGAGLVAELGLT-SRVHFITASLAKAF-AGR-AGI 259 (407)
T ss_pred EEEECCCCCCCCccccHHHHHHHHHHcCC-EEEEECcccccCcCCCCCchHHhcCCC-CCCCEEEeechHhh-hcc-CeE
Confidence 99999999999999999999999999999 899999998765321 111 24699999999975 554 689
Q ss_pred EEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcC
Q 012991 264 LYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWG 343 (452)
Q Consensus 264 l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~ 343 (452)
+++++++++. + . ... . ...+.++.+...+.++.++++.+.. .+..+++++++++++.+.|.++ +
T Consensus 260 l~~~~~~~~~-~-~-~~~--~------~~~~~~t~~~~~~aa~~aal~~~~~----~~~~~~~l~~~~~~l~~~L~~~-g 323 (407)
T PRK07179 260 ITCPRELAEY-V-P-FVS--Y------PAIFSSTLLPHEIAGLEATLEVIES----ADDRRARLHANARFLREGLSEL-G 323 (407)
T ss_pred EEeCHHHHHH-H-H-HhC--c------CeeeCCCCCHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHHHc-C
Confidence 9888776554 1 1 000 0 0011234444444455566776653 3567788999999999999887 7
Q ss_pred CCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEeccccc
Q 012991 344 TSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVY 423 (452)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~ 423 (452)
+++..+ +.++++.++ ...+...+.+.|.++ ||.+...+.+.. ....+++||+++..
T Consensus 324 ~~v~~~----~~i~~l~~~------~~~~~~~~~~~L~~~-GI~~~~~~~p~~-------------~~~~~~lRis~~~~ 379 (407)
T PRK07179 324 YNIRSE----SQIIALETG------SERNTEVLRDALEER-NVFGAVFCAPAT-------------PKNRNLIRLSLNAD 379 (407)
T ss_pred CCCCCC----CCEEEEEeC------CHHHHHHHHHHHHHC-CceEeeecCCCC-------------CCCCceEEEEECCC
Confidence 766532 567777764 233566788888764 998653333211 12357999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcc
Q 012991 424 NTLEDYEKFRDAVILLVEEG 443 (452)
Q Consensus 424 ~t~~di~~l~~~l~~~~~~~ 443 (452)
+|.+||++++++|++++++.
T Consensus 380 ~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 380 LTASDLDRVLEVCREARDEV 399 (407)
T ss_pred CCHHHHHHHHHHHHHHHHhh
Confidence 99999999999999998753
No 49
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.97 E-value=2.7e-28 Score=241.92 Aligned_cols=335 Identities=14% Similarity=0.081 Sum_probs=231.0
Q ss_pred CCCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhC----CC-CC-CcEEEecChh
Q 012991 36 HQHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLIN----AD-DV-GEISLVDNAT 108 (452)
Q Consensus 36 ~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~----~~-~~-~~i~~t~g~t 108 (452)
.+++++.|+.+.+. ..|+.+.+++.+.+... ..+.+. ..+..++|++|+++++ .+ ++ ++|++|+|++
T Consensus 30 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~-----~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~ 103 (399)
T PRK07681 30 AGHKMIDLSIGNPDMPPADFVREEMVHTANQK-----ESYGYT-LSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQ 103 (399)
T ss_pred cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhcc-----ccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcH
Confidence 46788999988765 45666788877765321 112222 2456778888888774 21 35 7899999999
Q ss_pred HHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccC
Q 012991 109 TAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKD 187 (452)
Q Consensus 109 ~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~ 187 (452)
+++.+++.++ +++||+|++++|+|+.....+ ...|++++.++++. +....+ ++++++.+
T Consensus 104 ~al~~~~~~~--------~~~Gd~Vlv~~P~y~~~~~~~----~~~G~~~~~v~~~~--~~~~~~d~~~l~~~~------ 163 (399)
T PRK07681 104 DGLVHLPMVY--------ANPGDIILVPDPGYTAYETGI----QMAGATSYYMPLKK--ENDFLPDLELIPEEI------ 163 (399)
T ss_pred HHHHHHHHHh--------CCCCCEEEECCCCccchHHHH----HhcCCEEEEEecCC--CCCCcCCHHHHHHhc------
Confidence 9999999876 589999999999998865554 45699999996521 111233 78888887
Q ss_pred CCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCc----ccc---cc-ccCccEEEEcCcccCc
Q 012991 188 GKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSI----KID---VK-EIGADFYVSNLHKWFF 256 (452)
Q Consensus 188 ~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~----~~~---~~-~~~~d~~~~s~~K~l~ 256 (452)
.+++++|++++|+||||.+++ +++|+++|+++++ ++|+|++++.... ... +. ..+..+++.|+||. +
T Consensus 164 ~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~-~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~ 241 (399)
T PRK07681 164 ADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNI-IVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKS-Y 241 (399)
T ss_pred cccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCe-EEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccc-c
Confidence 467899999999999999998 5678889999999 7999999863221 111 11 11235778899995 7
Q ss_pred CCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 012991 257 CPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKM 334 (452)
Q Consensus 257 g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l 334 (452)
|.+| +|+++.++++++. + .... .....+.+...+.++..+++.... -++..++.++++++.+
T Consensus 242 ~~~GlRiG~~i~~~~l~~~-~-~~~~-----------~~~~~~~s~~~q~~~~~~l~~~~~---~~~~~~~~~~~~~~~l 305 (399)
T PRK07681 242 SLAGSRIGYMIGNEEIVRA-L-TQFK-----------SNTDYGVFLPIQKAACAALRNGAA---FCEKNRGIYQERRDTL 305 (399)
T ss_pred CCccceeEEEecCHHHHHH-H-HHHH-----------hhcccCCCHHHHHHHHHHHhCcHH---HHHHHHHHHHHHHHHH
Confidence 7777 8999888777765 2 1110 000012222222333333322111 2455666778888889
Q ss_pred HHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccc
Q 012991 335 ARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITG 414 (452)
Q Consensus 335 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (452)
.+.|.+. ++++..|.+ +.++|+.++ .+.+..++.+.|.+++||.+.++..+.. ..++
T Consensus 306 ~~~L~~~-g~~~~~p~~--g~f~~~~l~------~~~~~~~~~~~l~~~~gv~v~pg~~f~~--------------~~~~ 362 (399)
T PRK07681 306 VDGFRTF-GWNVDKPAG--SMFVWAEIP------KGWTSLSFAYALMDRANVVVTPGHAFGP--------------HGEG 362 (399)
T ss_pred HHHHHHC-CCcccCCCe--eeEEEEECC------CCCCHHHHHHHHHHhCCEEEeCChhhCc--------------CCCC
Confidence 9999886 777655554 788999887 3456678888887756999987655421 2357
Q ss_pred eEEecccccCCHHHHHHHHHHHHHH
Q 012991 415 YARISHQVYNTLEDYEKFRDAVILL 439 (452)
Q Consensus 415 ~iRis~~~~~t~~di~~l~~~l~~~ 439 (452)
++|++++. +.++++.++++|++.
T Consensus 363 ~iRis~~~--~~~~~~~~l~~l~~~ 385 (399)
T PRK07681 363 FVRIALVQ--DEEVLQQAVENIRNS 385 (399)
T ss_pred eEEEEecC--CHHHHHHHHHHHHHh
Confidence 99999984 789999999999883
No 50
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.97 E-value=9.7e-28 Score=237.01 Aligned_cols=336 Identities=15% Similarity=0.166 Sum_probs=230.7
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhH----hC--CCCCCcEEEecChhHH
Q 012991 38 HGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDL----IN--ADDVGEISLVDNATTA 110 (452)
Q Consensus 38 ~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~----~~--~~~~~~i~~t~g~t~a 110 (452)
..++.|+.|.+. +.|+.+.+++.+.+.. +... |....+..++|+.++++ +| ++ +++|++|+|++++
T Consensus 24 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~----~~~~--Y~~~~G~~~lr~~la~~~~~~~~~~~~-~~~i~~t~g~~~a 96 (382)
T PRK06108 24 EGVLPLWFGESDLPTPDFIRDAAAAALAD----GETF--YTHNLGIPELREALARYVSRLHGVATP-PERIAVTSSGVQA 96 (382)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhc----CCCC--CCCCCCCHHHHHHHHHHHHHHhCCCcC-cceEEEeCChHHH
Confidence 568899888766 4577788888876543 1111 22233445555555554 46 53 6899999999999
Q ss_pred HHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCC
Q 012991 111 AAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGK 189 (452)
Q Consensus 111 ~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~ 189 (452)
+.+++.++ +++||+|++++|+|......+ +..|++++.+++... +....+ ++++++.+ .+
T Consensus 97 l~~~~~~l--------~~~gd~vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~-~~~~~~d~~~l~~~~------~~ 157 (382)
T PRK06108 97 LMLAAQAL--------VGPGDEVVAVTPLWPNLVAAP----KILGARVVCVPLDFG-GGGWTLDLDRLLAAI------TP 157 (382)
T ss_pred HHHHHHHh--------cCCCCEEEEeCCCccchHHHH----HHCCCEEEEeeCCCC-CCCccCCHHHHHHhc------Cc
Confidence 99999876 588999999999998765544 556999999965321 112234 78898888 46
Q ss_pred ceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCcc--------ccccc-cCccEEEEcCcccCcC
Q 012991 190 MIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSIK--------IDVKE-IGADFYVSNLHKWFFC 257 (452)
Q Consensus 190 ~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~~--------~~~~~-~~~d~~~~s~~K~l~g 257 (452)
++++|++++++||||.+++ +++|+++|+++|+ ++|+|++++..... .++.. .+..+++.|++|. +|
T Consensus 158 ~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~-~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~g 235 (382)
T PRK06108 158 RTRALFINSPNNPTGWTASRDDLRAILAHCRRHGL-WIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKN-WA 235 (382)
T ss_pred cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCc-EEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhh-cc
Confidence 7899999999999999986 5678899999999 79999997644321 12211 1245788899995 56
Q ss_pred CCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 012991 258 PPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMA 335 (452)
Q Consensus 258 ~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~ 335 (452)
++| +|++++++++++. + ..... + .....+...+.+...+++.... .++.++++++++++.+.
T Consensus 236 ~~G~RiG~~~~~~~~~~~-~-~~~~~--~---------~~~~~~~~~q~a~~~~l~~~~~---~~~~~~~~~~~~~~~l~ 299 (382)
T PRK06108 236 MTGWRLGWLVAPPALGQV-L-EKLIE--Y---------NTSCVAQFVQRAAVAALDEGED---FVAELVARLRRSRDHLV 299 (382)
T ss_pred CcccceeeeeCCHHHHHH-H-HHHHH--h---------cccCCChHHHHHHHHHHhCChH---HHHHHHHHHHHHHHHHH
Confidence 555 7999998877765 1 11100 0 0011222222222223322111 25677888889999999
Q ss_pred HHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccce
Q 012991 336 RMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGY 415 (452)
Q Consensus 336 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (452)
+.|.+.+++++..|.. +.++|+.++ ...+..++++.|.+++||.+.++..+.. ..+++
T Consensus 300 ~~L~~~~~~~~~~p~~--g~~~~~~l~------~~~~~~~~~~~ll~~~gV~v~pg~~f~~--------------~~~~~ 357 (382)
T PRK06108 300 DALRALPGVEVAKPDG--AMYAFFRIP------GVTDSLALAKRLVDEAGLGLAPGTAFGP--------------GGEGF 357 (382)
T ss_pred HHHHhCCCCcccCCCe--eEEEEEeCC------CCCCHHHHHHHHHHhCCEEEeCchhhCC--------------CCCCE
Confidence 9998877777766544 667888886 2345678888886667999976554421 23579
Q ss_pred EEecccccCCHHHHHHHHHHHHHHHh
Q 012991 416 ARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 416 iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
+|+|++. +.++++..++.|++.++
T Consensus 358 ~Ris~~~--~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 358 LRWCFAR--DPARLDEAVERLRRFLA 381 (382)
T ss_pred EEEEecC--CHHHHHHHHHHHHHHHh
Confidence 9999997 88999999999988764
No 51
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.97 E-value=5.7e-28 Score=214.91 Aligned_cols=352 Identities=13% Similarity=0.145 Sum_probs=269.7
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHH
Q 012991 38 HGVARINNGSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQ 117 (452)
Q Consensus 38 ~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~ 117 (452)
+....|. +++.-.|..|.+++..... .+++..+.+++.++++-+...|.......+++..+|+.+++.++.+
T Consensus 16 p~~~L~g-PGPsnl~~~V~~A~~~~~l-------gh~sPe~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N 87 (385)
T KOG2862|consen 16 PVRTLLG-PGPSNLSGRVQEAMSRPSL-------GHMSPEFVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVN 87 (385)
T ss_pred Ccceeec-CCCcCCCHHHHHhhcCCcc-------ccCCHHHHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHh
Confidence 3344444 4455566668888876432 3456777889999999999999876556778888999999999998
Q ss_pred hhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEE
Q 012991 118 IGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAII 196 (452)
Q Consensus 118 l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~ 196 (452)
+ +.|||+|++....-.+ ..|..++++.|++|..++.++ .... ++.+++.+. .+++++|++
T Consensus 88 ~--------lePgd~vLv~~~G~wg--~ra~D~~~r~ga~V~~v~~~~----G~~~~le~i~~~ls-----qh~p~~vfv 148 (385)
T KOG2862|consen 88 L--------LEPGDNVLVVSTGTWG--QRAADCARRYGAEVDVVEADI----GQAVPLEEITEKLS-----QHKPKAVFV 148 (385)
T ss_pred h--------cCCCCeEEEEEechHH--HHHHHHHHhhCceeeEEecCc----ccCccHHHHHHHHH-----hcCCceEEE
Confidence 7 6899999987554433 334444789999999995422 2234 888999887 478999999
Q ss_pred eccCCCCccccc-HHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCccccCC
Q 012991 197 DHITSMPCVVIP-VRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDM 275 (452)
Q Consensus 197 ~~~~n~tG~~~~-l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l 275 (452)
+|..+.||+..| ++.+.++|++|++ +++||.+.|+|..++.++.|++|+.....+|.|++|+|+++++.++...++ +
T Consensus 149 ~hgdsSTgV~q~~~~~~g~lc~k~~~-lllVD~VaSlggt~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~-~ 226 (385)
T KOG2862|consen 149 THGDSSTGVLQDLLAISGELCHKHEA-LLLVDTVASLGGTEFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEA-I 226 (385)
T ss_pred EecCccccccchHHHHHHHHhhcCCe-EEEEechhhcCCccceehhhcccEEEecchhhcCCCCCcceeecCHHHHHH-H
Confidence 999999999999 6677899999999 999999999999999999999999999999999999999999988766654 2
Q ss_pred CC----C---ceec-cCCCCcc---cccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCC
Q 012991 276 HH----P---VVSH-EFGNGLP---IESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGT 344 (452)
Q Consensus 276 ~~----~---~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~ 344 (452)
.. + |+.+ +++...- ....|+.|+++..++++.+|++.+.+. |+++..++.+++.++++..|.+. |+
T Consensus 227 ~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~ee--GL~~~~~rH~e~s~~l~~~l~~~-GL 303 (385)
T KOG2862|consen 227 RDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEE--GLENSWRRHREMSKWLKLSLEAL-GL 303 (385)
T ss_pred hhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHh-Cc
Confidence 11 1 1110 0111000 125678899999999999999999864 99999999999999999999987 77
Q ss_pred CcCCCc--ccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccc
Q 012991 345 SLGSPP--EICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQV 422 (452)
Q Consensus 345 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 422 (452)
+..... .....+..+.+| .+.|..++...+...+++.+.-+..+ ..+..+||++..
T Consensus 304 q~fv~~e~~rlptvttv~vp------~gvDw~dVv~~~~~~~~vei~gglg~----------------~~gKv~RIGl~g 361 (385)
T KOG2862|consen 304 QLFVVDEELRLPTVTTVKVP------YGVDWKDVVAYAMSHYVVEIGGGLGP----------------TVGKVFRIGLLG 361 (385)
T ss_pred cceecChhhccCcceeeecC------CCCCHHHHHHHHHHhcCEEeccccCC----------------CcccEEEEEEee
Confidence 654332 222445566666 57888999999988778888544443 346799999754
Q ss_pred c-CCHHHHHHHHHHHHHHHhcc
Q 012991 423 Y-NTLEDYEKFRDAVILLVEEG 443 (452)
Q Consensus 423 ~-~t~~di~~l~~~l~~~~~~~ 443 (452)
- -+.+-|+..++.|+..+++.
T Consensus 362 cna~~e~i~~v~~ll~~alq~~ 383 (385)
T KOG2862|consen 362 CNANVEYIDNVVELLKLALQRK 383 (385)
T ss_pred ccCCcHHHHHHHHHHHHHHhhc
Confidence 3 36778999999999988763
No 52
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.96 E-value=1e-27 Score=236.37 Aligned_cols=338 Identities=14% Similarity=0.124 Sum_probs=230.8
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHH
Q 012991 37 QHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVL 115 (452)
Q Consensus 37 ~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~ 115 (452)
...+|+|+.+... +.++.+.+++.+.+... ....+...++..++|+++++++|++ ++++++|+|+|+++..++
T Consensus 27 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~-----~~~~y~~~~g~~~lr~~ia~~l~~~-~~~v~~~~g~t~al~~~~ 100 (380)
T PRK06225 27 DKEMIWMGQNTNHLGPHEEVREAMIRCIEEG-----EYCKYPPPEGFPELRELILKDLGLD-DDEALITAGATESLYLVM 100 (380)
T ss_pred cCCeEEccCCCCCCCCCHHHHHHHHHHHhcC-----CCCCCCCCcchHHHHHHHHHhcCCC-CCcEEEeCCHHHHHHHHH
Confidence 4678999876554 56677888888876421 1122344556889999999999996 789999999999999999
Q ss_pred HHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEE
Q 012991 116 QQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLA 194 (452)
Q Consensus 116 ~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv 194 (452)
.++ +.+|++|++++|.|...... ++..|.+++.+++... .++..+ ++.+++.+ ++++++|
T Consensus 101 ~~~--------~~~gd~vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~~-~~~~~~d~~~l~~~~------~~~~~~v 161 (380)
T PRK06225 101 RAF--------LSPGDNAVTPDPGYLIIDNF----ASRFGAEVIEVPIYSE-ECNYKLTPELVKENM------DENTRLI 161 (380)
T ss_pred HHh--------cCCCCEEEEcCCCCcchHHH----HHHhCceEEeeccccc-cCCccCCHHHHHhhc------CCCceEE
Confidence 876 47899999999999765333 4556999998864211 112234 88899888 5678999
Q ss_pred EEeccCCCCccccc---HHHHHHHHHHcCCCEEEEeccccc---CCcc-ccccccCccEEEEcCcccCcCCCC--cEEEE
Q 012991 195 IIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAM---GSIK-IDVKEIGADFYVSNLHKWFFCPPS--VAFLY 265 (452)
Q Consensus 195 ~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~---g~~~-~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~ 265 (452)
++++++||||.+++ +++|.++|+++|+ ++|+|+++.. +... .... ....+++.|++|+ +|++| +|+++
T Consensus 162 ~l~~p~NptG~~~~~~~~~~i~~~a~~~~~-~ii~De~y~~~~~~~~~~~~~~-~~~~i~~~s~SK~-~g~~G~RiG~i~ 238 (380)
T PRK06225 162 YLIDPLNPLGSSYTEEEIKEFAEIARDNDA-FLLHDCTYRDFAREHTLAAEYA-PEHTVTSYSFSKI-FGMAGLRIGAVV 238 (380)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHCCc-EEEEehhHHHHhccCCchhhcC-CCCEEEEeechhh-cCCccceeEEEe
Confidence 99999999999886 7788899999999 7999998642 1111 1111 1345777899997 57677 79999
Q ss_pred EecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 012991 266 CRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS 345 (452)
Q Consensus 266 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~ 345 (452)
+++++++. + .+.... ....+...+.+...+++.... -.+.+++..+++.+.+.+.|+++++..
T Consensus 239 ~~~~l~~~-~-~~~~~~------------~~~~~~~~~~~a~~~l~~~~~---~~~~~~~~~~~~~~~l~~~L~~~~~~~ 301 (380)
T PRK06225 239 ATPDLIEV-V-KSIVIN------------DLGTNVIAQEAAIAGLKVKDE---WIDRIRRTTFKNQKLIKEAVDEIEGVF 301 (380)
T ss_pred cCHHHHHH-H-HHHHhc------------ccCCCHHHHHHHHHHHhcchH---HHHHHHHHHHHHHHHHHHHHHhCcCCc
Confidence 98877764 1 111000 011122222222223322111 134555556666777888888766654
Q ss_pred cC-CCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccC
Q 012991 346 LG-SPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYN 424 (452)
Q Consensus 346 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~ 424 (452)
+. .+.. ++++++.++. .+.+..++.+.|.+ +||.++++..+.. ....+++|+|++.
T Consensus 302 ~~~~~~~--g~~~~~~~~~-----~~~~~~~l~~~l~~-~gi~v~~g~~~~~-------------~~~~~~iR~s~~~-- 358 (380)
T PRK06225 302 LPVYPSH--GNMMVIDISE-----AGIDPEDLVEYLLE-RKIFVRQGTYTSK-------------RFGDRYIRVSFSI-- 358 (380)
T ss_pred cccCCCC--CeEEEEEccc-----ccCCHHHHHHHHHH-CCEEEcCCcccCc-------------CCCCceEEEEeCC--
Confidence 32 2322 6688888752 23567889999975 5999977654321 1235699999875
Q ss_pred CHHHHHHHHHHHHHHHhc
Q 012991 425 TLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 425 t~~di~~l~~~l~~~~~~ 442 (452)
++++++++++.|+++++.
T Consensus 359 ~~e~l~~~~~~l~~~~~~ 376 (380)
T PRK06225 359 PREQVEVFCEEFPDVVET 376 (380)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 789999999999999875
No 53
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=1.5e-27 Score=234.54 Aligned_cols=335 Identities=15% Similarity=0.146 Sum_probs=232.5
Q ss_pred CCCHHHHHhhhccCCCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcE
Q 012991 23 CISEAEIRDEFSHHQHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEI 101 (452)
Q Consensus 23 ~~~~~~ir~~~~~~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i 101 (452)
...+....+.+...+..+++|+.+..+ ..|+.+.+++.... .. ..|+ .....++|++++++++++ +++|
T Consensus 37 ~~~~~~~~~~~~~~~~~~i~l~~n~~p~~~~~~v~~a~~~~~-~~-----~~Yp---~~~~~~lr~~ia~~~~~~-~~~I 106 (380)
T PLN03026 37 ILPFEVLSAQLGRKPEDIVKLDANENPYGPPPEVLEALGNMK-FP-----YVYP---DPESRRLRAALAEDSGLE-SENI 106 (380)
T ss_pred CCChHHHHHHhCCCccceEEccCCCCCCCCCHHHHHHHHhhH-hh-----ccCC---CCCHHHHHHHHHHHhCcC-hhhE
Confidence 445555556554445689999988544 45555888876421 11 1121 123578999999999996 7899
Q ss_pred EEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHH
Q 012991 102 SLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKG 180 (452)
Q Consensus 102 ~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~ 180 (452)
++|+|+++++..++.++ +++||+|++++|.|...... ++..|++++.++. ++++.+ ++++++.
T Consensus 107 ~~t~Ga~~~i~~~~~~~--------~~~gd~Vlv~~P~y~~y~~~----~~~~g~~~~~v~~----~~~~~~d~~~l~~~ 170 (380)
T PLN03026 107 LVGCGADELIDLLMRCV--------LDPGDKIIDCPPTFGMYVFD----AAVNGAEVIKVPR----TPDFSLDVPRIVEA 170 (380)
T ss_pred EEcCCHHHHHHHHHHHh--------cCCCCEEEEcCCChHHHHHH----HHHcCCEEEEeec----CCCCCcCHHHHHHH
Confidence 99999999999999876 58999999999999754332 4557999999854 233344 7888888
Q ss_pred HhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCc---cc-cccccCccEEEEcCcccCc
Q 012991 181 IEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSI---KI-DVKEIGADFYVSNLHKWFF 256 (452)
Q Consensus 181 i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~---~~-~~~~~~~d~~~~s~~K~l~ 256 (452)
++ ++++++|++++|+||||.++|.+++.++++.. + ++|+|+++..... .. .....+..+++.|++|. +
T Consensus 171 ~~-----~~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~-~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~-~ 242 (380)
T PLN03026 171 VE-----THKPKLLFLTSPNNPDGSIISDDDLLKILELP-I-LVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKR-A 242 (380)
T ss_pred Hh-----ccCCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-C-EEEEECcchhhcCCcchHHHHHhCCCEEEEecchHh-h
Confidence 84 36789999999999999999999999999865 8 7999999753211 11 11122345788999995 7
Q ss_pred CCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 012991 257 CPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKM 334 (452)
Q Consensus 257 g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l 334 (452)
|++| +|+++.++++++. +. .... ....+...+.+..++++.. . -+++.++.+++.++++
T Consensus 243 glaGlRiGy~~~~~~~i~~-l~-~~~~-------------~~~~~~~~q~aa~~aL~~~-~---~~~~~~~~~~~~r~~l 303 (380)
T PLN03026 243 GLAGLRVGYGAFPLSIIEY-LW-RAKQ-------------PYNVSVAAEVAACAALSNP-K---YLEDVKNALVEERERL 303 (380)
T ss_pred cCccccceeeecCHHHHHH-HH-HhcC-------------CCCCCHHHHHHHHHHhhCH-H---HHHHHHHHHHHHHHHH
Confidence 8777 7898888877764 21 1100 0122223333333344321 1 2566677788889999
Q ss_pred HHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccc
Q 012991 335 ARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITG 414 (452)
Q Consensus 335 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (452)
.+.|.+++++.+ .+++ ++++++.++ .+.+..++.+.|.+ .||.++.+..+ ..++
T Consensus 304 ~~~L~~~~~~~~-~p~~--~~f~~~~~~------~~~~~~~~~~~l~~-~gI~v~~~~~~----------------~~~~ 357 (380)
T PLN03026 304 FGLLKEVPFLEP-YPSD--ANFILCRVT------SGRDAKKLKEDLAK-MGVMVRHYNSK----------------ELKG 357 (380)
T ss_pred HHHHHHCCCCeE-CCCC--CeEEEEECC------CCCCHHHHHHHHHH-CCeEEEECCCC----------------CCCC
Confidence 999988744443 3333 778898886 23466789999875 59999754321 2356
Q ss_pred eEEecccccCCHHHHHHHHHHHHHH
Q 012991 415 YARISHQVYNTLEDYEKFRDAVILL 439 (452)
Q Consensus 415 ~iRis~~~~~t~~di~~l~~~l~~~ 439 (452)
++|||++ +.+++++++++|+++
T Consensus 358 ~lRis~~---~~~~~~~l~~al~~~ 379 (380)
T PLN03026 358 YIRVSVG---KPEHTDALMEALKQL 379 (380)
T ss_pred EEEEecC---CHHHHHHHHHHHHHh
Confidence 9999998 788999999999864
No 54
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.96 E-value=5.3e-28 Score=235.64 Aligned_cols=319 Identities=17% Similarity=0.171 Sum_probs=227.3
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHH
Q 012991 37 QHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVL 115 (452)
Q Consensus 37 ~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~ 115 (452)
..+++.|+.+..+ ..|+.+++++.++......+ .... ..++|+.++++++++ +++|++|+|+++++..++
T Consensus 18 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y-------~~~~-~~~lr~~ia~~~~~~-~~~i~~~~G~~~~l~~~~ 88 (346)
T TIGR01141 18 GKEVIKLNSNENPFGPPPKAKEALRAEADKLHRY-------PDPD-PAELKQALADYYGVD-PEQILLGNGSDEIIELLI 88 (346)
T ss_pred CCceEEccCCCCCCCCCHHHHHHHHHhHHHhhcC-------CCCC-HHHHHHHHHHHhCcC-hHHEEEcCCHHHHHHHHH
Confidence 3578899876644 56777999999876433211 1112 378999999999985 789999999999999888
Q ss_pred HHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEE
Q 012991 116 QQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLA 194 (452)
Q Consensus 116 ~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv 194 (452)
.++ +++||+|++++|+|+..... ++..|.+++.+++ +.++.+ ++++++.+ ++++++|
T Consensus 89 ~~l--------~~~gd~v~~~~p~y~~~~~~----~~~~g~~~~~~~~----~~~~~~d~~~l~~~~------~~~~~~v 146 (346)
T TIGR01141 89 RAF--------LEPGDAVLVPPPTYSMYEIS----AKIHGAEVVKVPL----DEDGQLDLEDILVAI------DDKPKLV 146 (346)
T ss_pred HHh--------cCCCCEEEEcCCCHHHHHHH----HHHcCCeEEEecc----CCCCCCCHHHHHHhc------CCCCCEE
Confidence 876 47899999999998754333 4557999999854 333434 88888876 5789999
Q ss_pred EEeccCCCCcccccHHHHHHHHHHc--CCCEEEEecccccCCc---cccc-cccCccEEEEcCcccCcCCCC--cEEEEE
Q 012991 195 IIDHITSMPCVVIPVRKLVKICRDE--GVDQVFVDAAHAMGSI---KIDV-KEIGADFYVSNLHKWFFCPPS--VAFLYC 266 (452)
Q Consensus 195 ~~~~~~n~tG~~~~l~~i~~l~~~~--~~~~~ivD~a~~~g~~---~~~~-~~~~~d~~~~s~~K~l~g~~G--~G~l~~ 266 (452)
++++++||||.+.|++++.++|+.+ ++ ++++|++++.-.. ..+. .....++++.|++|+ +|++| +|++++
T Consensus 147 ~l~~p~NptG~~~~~~~~~~l~~~~~~~~-~ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~g~~G~r~G~~~~ 224 (346)
T TIGR01141 147 FLCSPNNPTGNLLSRSDIEAVLERTPEDA-LVVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKA-FGLAGLRIGYAIA 224 (346)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHhCCCCc-EEEEECchhhhcCCccHHHHHhhCCCEEEEehhhHh-hhchhhhceeeec
Confidence 9999999999999999999999887 99 7999999763111 1111 112234778899997 55445 799999
Q ss_pred ecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 012991 267 RKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSL 346 (452)
Q Consensus 267 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~ 346 (452)
++++++. + .+.... .+.+. .++..+..++... ...+.++++++++++.+.+.|.+++++++
T Consensus 225 ~~~~~~~-~-~~~~~~-------------~~~~~---~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 285 (346)
T TIGR01141 225 NAEIIDA-L-NKVRAP-------------FNLSR---LAQAAAIAALRDD-DFIEKTVEEINAERERLYDGLKKLPGLEV 285 (346)
T ss_pred CHHHHHH-H-HhccCC-------------CCCCH---HHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 8877765 2 111000 11112 2233334444432 13677788888999999999988777775
Q ss_pred CCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCH
Q 012991 347 GSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTL 426 (452)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~ 426 (452)
.. +. ++++++.++ . ++.++.+.|.+ .||.+.++..+.. . ++++|+|++ ++
T Consensus 286 ~~-~~--g~~~~~~~~-------~-~~~~~~~~L~~-~gI~v~~g~~f~~--------------~-~~~iRls~~---~~ 335 (346)
T TIGR01141 286 YP-SD--ANFVLIRFP-------R-DADALFEALLE-KGIIVRDLNSYPG--------------L-PNCLRITVG---TR 335 (346)
T ss_pred CC-Cc--CCEEEEecC-------C-CHHHHHHHHHH-CCeEEEeCCCcCC--------------C-CCeEEEecC---CH
Confidence 43 22 678888886 2 56789999976 5999976654311 2 679999987 89
Q ss_pred HHHHHHHHHHH
Q 012991 427 EDYEKFRDAVI 437 (452)
Q Consensus 427 ~di~~l~~~l~ 437 (452)
+|+++++++|+
T Consensus 336 ~~i~~~~~~l~ 346 (346)
T TIGR01141 336 EENDRFLAALR 346 (346)
T ss_pred HHHHHHHHHhC
Confidence 99999999874
No 55
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.96 E-value=1.5e-27 Score=240.20 Aligned_cols=350 Identities=18% Similarity=0.206 Sum_probs=234.8
Q ss_pred CeEEeccCCCC-CCcHHHHHHHHHHHHHH-hcCC-chhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHH
Q 012991 39 GVARINNGSFG-SCPKSVLADQQKWQLKF-LQQP-DDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVL 115 (452)
Q Consensus 39 ~~~~l~~~~~~-~~p~~v~e~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~ 115 (452)
...+++.+.++ ..|..+.+..... ... ..++ ......+..+...+.++++++++|++ .+++.+|+|||+++..++
T Consensus 69 ~~~~lg~g~~~~~~p~~~~~~~~~~-~~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~~-~~~v~~~~g~t~~~~~~~ 146 (447)
T PRK00451 69 YPSFLGAGAYDHYIPAVVDHIISRS-EFYTAYTPYQPEISQGTLQAIFEYQTMICELTGMD-VANASMYDGATALAEAAL 146 (447)
T ss_pred CcccCcccccCCcCcHHHHHHHhch-hHHHhcCCCCCccchHHHHHHHHHHHHHHHHhCCC-cceEEecCcHHHHHHHHH
Confidence 45566655554 3455444443222 111 1122 11112345566777888999999996 678999999999999888
Q ss_pred HHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEE
Q 012991 116 QQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLA 194 (452)
Q Consensus 116 ~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv 194 (452)
.++. ..+|++|++++++|+++..++..++...|.+++.+++ +++ .+ ++++++.+ ++++++|
T Consensus 147 ~a~~-------~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~----~~~-~~d~~~l~~~i------~~~t~~v 208 (447)
T PRK00451 147 MAVR-------ITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPY----EDG-VTDLEALEAAV------DDDTAAV 208 (447)
T ss_pred HHHH-------hcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecC----CCC-CCCHHHHHHhc------CCCeEEE
Confidence 8762 3688999999999999999998878888999999954 333 44 89999999 5789999
Q ss_pred EEeccCCCCcccccHHHHHHHHHHcCCCEEEE--ecccccCCccccccccCccEEEEcCccc----CcCCCCcEEEEEec
Q 012991 195 IIDHITSMPCVVIPVRKLVKICRDEGVDQVFV--DAAHAMGSIKIDVKEIGADFYVSNLHKW----FFCPPSVAFLYCRK 268 (452)
Q Consensus 195 ~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~iv--D~a~~~g~~~~~~~~~~~d~~~~s~~K~----l~g~~G~G~l~~~~ 268 (452)
+++++ |+||.+.|+++|+++|+++|+ ++++ |.. +.|... ....+++|++++|++|| .++++|+|++++++
T Consensus 209 ~l~~p-n~tG~v~~l~~I~~~a~~~~~-~~iv~~d~~-~~g~~~-~~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~ 284 (447)
T PRK00451 209 VVQYP-NFFGVIEDLEEIAEIAHAGGA-LFIVGVDPV-SLGLLK-PPGEYGADIVVGEGQPLGIPLSFGGPYLGFFATRK 284 (447)
T ss_pred EEECC-CCCCeeCCHHHHHHHHHHCCC-EEEEEcChH-HhccCC-CcccCCCCEEEECCCcCCCCCCCCCCCchHHHhhH
Confidence 99998 889999999999999999999 6887 543 455443 23567899999998885 23334789999998
Q ss_pred CccccCCCCCce-eccC---C---CC------cccccccccccCccc---cccHHH--HHHHHHHhhcCHHHHHHHHHHH
Q 012991 269 SILSSDMHHPVV-SHEF---G---NG------LPIESAWIGTRDYSA---QLVIPS--AVTFVSRFEGGIDGIMQRNHEQ 330 (452)
Q Consensus 269 ~~~~~~l~~~~~-~~~~---~---~~------~~~~~~~~~~~~~~~---~~~~~~--al~~~~~~~~g~~~~~~~~~~~ 330 (452)
+++.. + ++.+ .+.. + .. ........++.+... +.++.+ +++++.+. |++++.+++.++
T Consensus 285 ~~~~~-~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~--g~~~~~~~~~~~ 360 (447)
T PRK00451 285 KLVRQ-M-PGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPE--GLRELAEQNHQK 360 (447)
T ss_pred HHHhh-C-CCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHH--HHHHHHHHHHHH
Confidence 88775 2 2221 1100 0 00 000111223333322 111222 34445433 899999999999
Q ss_pred HHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCC
Q 012991 331 ALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDG 410 (452)
Q Consensus 331 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~ 410 (452)
++++.+.|.+++++++.... ...++.+.++ .+..++.+.|.++ ||.+........ .
T Consensus 361 ~~~l~~~L~~~~g~~~~~~~--~~~~~~v~~~--------~~~~~~~~~L~~~-gi~~~~~~~~~~-------------~ 416 (447)
T PRK00451 361 AHYLAERLAEIGGVELFDGP--FFNEFVVRLP--------KPAEEVNEALLEK-GILGGYDLGRYY-------------P 416 (447)
T ss_pred HHHHHHHHhhcCCEEecCCC--eEEEEEEecC--------CCHHHHHHHHHhc-CCCCCccccccc-------------C
Confidence 99999999998777765221 1222334442 2457899999765 887421111000 0
Q ss_pred CccceEEecccccCCHHHHHHHHHHHHHHH
Q 012991 411 IITGYARISHQVYNTLEDYEKFRDAVILLV 440 (452)
Q Consensus 411 ~~~~~iRis~~~~~t~~di~~l~~~l~~~~ 440 (452)
...+++|+|++.++|++||++++++|++++
T Consensus 417 ~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 417 ELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred CcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 123689999999999999999999998864
No 56
>PRK08960 hypothetical protein; Provisional
Probab=99.96 E-value=8.3e-28 Score=237.51 Aligned_cols=342 Identities=11% Similarity=0.084 Sum_probs=233.0
Q ss_pred HhhhccCCCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhC------CCCCCcEE
Q 012991 30 RDEFSHHQHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLIN------ADDVGEIS 102 (452)
Q Consensus 30 r~~~~~~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~~i~ 102 (452)
++.++ .++++++|+.+.++ +.|+.+.+++.+.+... . ..|....+..++|+.++++++ ++ +++|+
T Consensus 25 ~~~~~-~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~---~---~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-~~~i~ 96 (387)
T PRK08960 25 NELEA-AGHDVIHLEIGEPDFTTAEPIVAAGQAALAAG---H---TRYTAARGLPALREAIAGFYAQRYGVDVD-PERIL 96 (387)
T ss_pred HHHHh-cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhcC---C---CccCCCCCCHHHHHHHHHHHHHHhCCCCC-hhhEE
Confidence 44454 46789999999988 57888999998876521 1 123334556778888888873 43 78999
Q ss_pred EecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHH
Q 012991 103 LVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGI 181 (452)
Q Consensus 103 ~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i 181 (452)
+|+|+++++.+++.++ +++||+|++++|+|+++...+.. .|.+++.++++. +....+ ++.+++.+
T Consensus 97 it~G~~~al~~~~~~~--------~~~gd~vlv~~p~y~~~~~~~~~----~g~~~~~v~~~~--~~~~~~d~~~l~~~~ 162 (387)
T PRK08960 97 VTPGGSGALLLASSLL--------VDPGKHWLLADPGYPCNRHFLRL----VEGAAQLVPVGP--DSRYQLTPALVERHW 162 (387)
T ss_pred EccCcHHHHHHHHHHh--------cCCCCEEEEcCCCCcchHHHHHh----cCCeEEEEecCc--ccCCCCCHHHHHHHh
Confidence 9999999999999876 58999999999999998766543 588998886521 112234 78888888
Q ss_pred hccccCCCceEEEEEeccCCCCcccccHH---HHHHHHHHcCCCEEEEecccccCCc---cccccccC-ccEEEEcCccc
Q 012991 182 EKGKKDGKMIRLAIIDHITSMPCVVIPVR---KLVKICRDEGVDQVFVDAAHAMGSI---KIDVKEIG-ADFYVSNLHKW 254 (452)
Q Consensus 182 ~~~~~~~~~~~lv~~~~~~n~tG~~~~l~---~i~~l~~~~~~~~~ivD~a~~~g~~---~~~~~~~~-~d~~~~s~~K~ 254 (452)
.++++++++++++||||..+|.+ +|+++|+++|+ ++|+|+++..-.. ...+.... -.+++.|+||.
T Consensus 163 ------~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~-~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 235 (387)
T PRK08960 163 ------NADTVGALVASPANPTGTLLSRDELAALSQALRARGG-HLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKY 235 (387)
T ss_pred ------CccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCC-EEEEEccccccccCCCCCChhhccCCEEEEeecccc
Confidence 56788999999999999999855 56777899999 7999998753211 11111122 23677899995
Q ss_pred CcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHH-HHHhhcCHHHHHHHHHHHH
Q 012991 255 FFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTF-VSRFEGGIDGIMQRNHEQA 331 (452)
Q Consensus 255 l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~~~g~~~~~~~~~~~~ 331 (452)
+|++| +|+++++++++.. + ..... .+....+...+.++..++.. ... -++..++.+++.+
T Consensus 236 -~g~~GlRiG~~~~~~~~~~~-~-~~~~~-----------~~~~~~s~~~q~a~~~~l~~~~~~---~l~~~~~~~~~~~ 298 (387)
T PRK08960 236 -FGMTGWRLGWLVAPPAAVPE-L-EKLAQ-----------NLYISASTPAQHAALACFEPETLA---ILEARRAEFARRR 298 (387)
T ss_pred -cCCcccEEEEEEcCHHHHHH-H-HHHHh-----------hhccCCCHHHHHHHHHHhhcCcHH---HHHHHHHHHHHHH
Confidence 77777 8999998877764 1 11100 00012222233333333321 111 3556677778888
Q ss_pred HHHHHHHHHHcCCCcC-CCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCC
Q 012991 332 LKMARMLANAWGTSLG-SPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDG 410 (452)
Q Consensus 332 ~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~ 410 (452)
+.+.+.|.+. ++.+. .|.+ +.++|+.+++ ...+..++++.|.+++||.+.++..+.. .
T Consensus 299 ~~l~~~L~~~-~~~~~~~p~g--~~f~~~~~~~-----~~~~~~~~~~~ll~~~gi~v~pg~~f~~-------------~ 357 (387)
T PRK08960 299 DFLLPALREL-GFGIAVEPQG--AFYLYADISA-----FGGDAFAFCRHFLETEHVAFTPGLDFGR-------------H 357 (387)
T ss_pred HHHHHHHHhc-CCcCCcCCCe--eEEEEEeccc-----cCCCHHHHHHHHHHhCCEEEcCchHhCC-------------C
Confidence 8899999876 65542 3433 7788888862 1245678888776557999987765522 1
Q ss_pred CccceEEecccccCCHHHHHHHHHHHHHHH
Q 012991 411 IITGYARISHQVYNTLEDYEKFRDAVILLV 440 (452)
Q Consensus 411 ~~~~~iRis~~~~~t~~di~~l~~~l~~~~ 440 (452)
..++++|++++. +.+.++..++.|++++
T Consensus 358 ~~~~~iRi~~~~--~~~~l~~al~~l~~~~ 385 (387)
T PRK08960 358 QAGQHVRFAYTQ--SLPRLQEAVERIARGL 385 (387)
T ss_pred CCCCeEEEEecC--CHHHHHHHHHHHHHHH
Confidence 234699999995 5677777777777655
No 57
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.96 E-value=2.7e-27 Score=233.83 Aligned_cols=348 Identities=11% Similarity=0.099 Sum_probs=237.6
Q ss_pred HHhhhccCCCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchh-hhhhhhHHHHHHHHHHHhHhCCC-C-CCcEEEe
Q 012991 29 IRDEFSHHQHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDF-YFNSLRKGILESRAAVKDLINAD-D-VGEISLV 104 (452)
Q Consensus 29 ir~~~~~~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~~~-~-~~~i~~t 104 (452)
+++..+ ...++++|+.|.+. +.|+.+.+++.+.+... ....+ ...+..+..+.+++.+++.+|.+ + +++|++|
T Consensus 19 ~~~~~~-~~~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t 95 (389)
T PRK05957 19 VGQLIR-ENPGTISLGQGVVSYPPPPEAIEALNNFLANP--ENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVT 95 (389)
T ss_pred HHHHHH-hCCCeEEccCCCCCCCCCHHHHHHHHHHHhCC--CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEe
Confidence 344443 23578999988876 57788999998876422 11111 12334566777888888888864 2 5689999
Q ss_pred cChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhc
Q 012991 105 DNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEK 183 (452)
Q Consensus 105 ~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~ 183 (452)
+|+++++..++.++ +++||+|++++|.|..+...+ +..|++++.++. +++..+ ++++++.+
T Consensus 96 ~G~~~~l~~~~~~~--------~~~gd~Vlv~~P~y~~~~~~~----~~~g~~~~~v~~----~~~~~~d~~~l~~~i-- 157 (389)
T PRK05957 96 AGSNMAFMNAILAI--------TDPGDEIILNTPYYFNHEMAI----TMAGCQPILVPT----DDNYQLQPEAIEQAI-- 157 (389)
T ss_pred CChHHHHHHHHHHh--------cCCCCEEEEeCCCCcCHHHHH----HhcCCEEEEeec----CCCCCcCHHHHHHhc--
Confidence 99999999888876 589999999999998764443 456999999954 333345 89999988
Q ss_pred cccCCCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCc------c-ccc-cccCccEEEEcCc
Q 012991 184 GKKDGKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSI------K-IDV-KEIGADFYVSNLH 252 (452)
Q Consensus 184 ~~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~------~-~~~-~~~~~d~~~~s~~ 252 (452)
++++++|++++++||||.++| +++|+++|+++|+ ++++|++++.... + ... ....-.+++.|++
T Consensus 158 ----~~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~-~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 232 (389)
T PRK05957 158 ----TPKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGI-YHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLS 232 (389)
T ss_pred ----CcCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCc-EEEEeccchhccCCCCCccChhhCCCccCcEEEEecch
Confidence 568999999999999999998 7788999999999 8999999753211 1 111 1112347788999
Q ss_pred ccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHH
Q 012991 253 KWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQ 330 (452)
Q Consensus 253 K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~ 330 (452)
|. +|++| +|++++++++++. + .... .......+...+.+ +...+.+-..-+++.+++++++
T Consensus 233 K~-~g~~GlRiG~~~~~~~~~~~-~-~~~~-----------~~~~~~~~~~~q~~---~~~~l~~~~~~~~~~~~~~~~~ 295 (389)
T PRK05957 233 KA-YGFASWRIGYMVIPIHLLEA-I-KKIQ-----------DTILICPPVVSQYA---ALGALQVGKSYCQQHLPEIAQV 295 (389)
T ss_pred hh-ccCccceeEEEecCHHHHHH-H-HHHH-----------hhcccCCCcHHHHH---HHHHHhCChHHHHHHHHHHHHH
Confidence 95 78888 8999988877765 1 1110 00011222222222 2333332000245666777888
Q ss_pred HHHHHHHHHHHcCC-CcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCC
Q 012991 331 ALKMARMLANAWGT-SLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKD 409 (452)
Q Consensus 331 ~~~l~~~L~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~ 409 (452)
++.+.+.|.+++++ .+..+.. +.++|+.++ .+.++.++++.|.+++||.+.++..+..
T Consensus 296 r~~l~~~L~~~~~~~~~~~~~g--g~~~~~~~~------~~~~~~~~~~~l~~~~gv~v~pg~~f~~------------- 354 (389)
T PRK05957 296 RQILLKSLGQLQDRCTLHPANG--AFYCFLKVN------TDLNDFELVKQLIREYRVAVIPGTTFGM------------- 354 (389)
T ss_pred HHHHHHHHHhcCCCccccCCCe--eEEEEEeCC------CCCChHHHHHHHHHHCCEEEccchhhCC-------------
Confidence 88899999887554 4443333 678888876 3567788999987656999987765521
Q ss_pred CCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 410 GIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 410 ~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
..++++|+|++.. +.+++++.++.|.+.++.
T Consensus 355 -~~~~~iRis~~~~-~~~~l~~~~~~l~~~~~~ 385 (389)
T PRK05957 355 -KNGCYLRIAYGAL-QKATAKEGIERLVQGLKT 385 (389)
T ss_pred -CCCCEEEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 2246999999753 577777777777776653
No 58
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.96 E-value=2e-27 Score=250.90 Aligned_cols=323 Identities=20% Similarity=0.255 Sum_probs=238.3
Q ss_pred hhhhHHHHHHHHHHHhHhCCCCCCcEEEecChh----HHHHHHHHHhhcccccCCCCCCC----EEEEeCCcchhHHHHH
Q 012991 76 NSLRKGILESRAAVKDLINADDVGEISLVDNAT----TAAAIVLQQIGRGFTEGRFHRND----TVLMLHCAFQAVKKSI 147 (452)
Q Consensus 76 ~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t----~a~~~~~~~l~~~~~~~~~~~g~----~Vl~~~~~~~s~~~~~ 147 (452)
.+..+.+.++++.+++++|. +.|.|++++| +++++++.++.. .+|| +|+++..+|.++..+|
T Consensus 564 ~g~~~~~~~~r~~la~i~g~---~~v~f~pnaga~ge~a~~~vi~~~~~-------~~Gd~~r~~vli~~~aH~sn~a~a 633 (993)
T PLN02414 564 QGYQEMFEDLGDLLCEITGF---DSFSLQPNAGAAGEYAGLMVIRAYHL-------SRGDHHRNVCIIPVSAHGTNPASA 633 (993)
T ss_pred HHHHHHHHHHHHHHHHHhCC---CeEEEcCCCcHHHHHHHHHHHHHHHh-------ccCCCCCCEEEeCCCcCccCHHHH
Confidence 56677899999999999999 5999999999 899999998731 2255 8999999999999888
Q ss_pred HHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEE
Q 012991 148 QAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFV 226 (452)
Q Consensus 148 ~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~iv 226 (452)
.+ .|.+++.+ +.++++.+ +++|++.++++ ++++++|++++++|.+|...|+++|.++||++|+ ++++
T Consensus 634 ~~----~G~~vv~v----~~d~~G~vDle~L~~~i~~~---~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Ga-lv~v 701 (993)
T PLN02414 634 AM----CGMKIVVV----GTDAKGNINIEELRKAAEAH---KDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGG-QVYM 701 (993)
T ss_pred HH----CCCEEEEe----ccCCCCCcCHHHHHHHHhcc---CCCeEEEEEECCCccccccchHHHHHHHHHHcCC-EEEE
Confidence 65 59999999 44556666 99999999632 3579999999999999999999999999999999 8999
Q ss_pred ecccccCCc-cccccccCccEEEEcCcccCcCCCC-----cEEEEEecCccccCCCCCceeccCCCCccc--cccccccc
Q 012991 227 DAAHAMGSI-KIDVKEIGADFYVSNLHKWFFCPPS-----VAFLYCRKSILSSDMHHPVVSHEFGNGLPI--ESAWIGTR 298 (452)
Q Consensus 227 D~a~~~g~~-~~~~~~~~~d~~~~s~~K~l~g~~G-----~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~ 298 (452)
|+++..+.. ..+...+++|++.+|.|||+++|.| +|++++++.+... ++.......+ +... ...+.|+.
T Consensus 702 DgAq~~a~~~l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~--lPg~~v~~~~-~~~~r~~~s~iGt~ 778 (993)
T PLN02414 702 DGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPF--LPSHPVVPTG-GIPRPEKTQPLGTI 778 (993)
T ss_pred EecCHHhccCcCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhccc--CCCCccccCC-CcccccCCCCcCCc
Confidence 999988874 4456678999999999999986654 9999999877765 2221100000 0000 11123554
Q ss_pred Ccccc---ccHHHHHHHHHHhhcCHHHH---HHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhh
Q 012991 299 DYSAQ---LVIPSAVTFVSRFEGGIDGI---MQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDD 372 (452)
Q Consensus 299 ~~~~~---~~~~~al~~~~~~~~g~~~~---~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (452)
+.... .++..++.++..+ |.+.+ .++...+++|+.+.|.+..++....+.+.+.+-+.+.++. .....+.+
T Consensus 779 ~~a~~g~al~l~~A~~yi~~l--G~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~-l~~~~g~~ 855 (993)
T PLN02414 779 SAAPWGSALILPISYTYIAMM--GSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRP-FKNTAGIE 855 (993)
T ss_pred cchhhhhHHHHHHHHHHHHHH--CHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEeccc-cccccCCC
Confidence 43222 5566677777765 55555 8888999999999998755555444332212223333321 11112356
Q ss_pred HHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhccc
Q 012991 373 ALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEEGQ 444 (452)
Q Consensus 373 ~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~~~ 444 (452)
+.++.+.|. ++||..+..+.+ .++++|+++..+++.+|+|+++++|+.+.++..
T Consensus 856 ~~di~krL~-d~Gihapt~~~p-----------------v~~~lmiepTE~~skeelDrf~~al~~i~~e~~ 909 (993)
T PLN02414 856 PEDVAKRLM-DYGFHAPTMSWP-----------------VPGTLMIEPTESESKAELDRFCDALISIREEIA 909 (993)
T ss_pred HHHHHHHHH-HcCcEEeeeccc-----------------cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence 688999997 579998764432 257999999999999999999999999887643
No 59
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.96 E-value=9.5e-28 Score=242.95 Aligned_cols=384 Identities=15% Similarity=0.085 Sum_probs=242.9
Q ss_pred ccccccCCCCCCCCCHHHHHhhhcc---------CCCCeEEeccCCCC-----------------CC-------------
Q 012991 11 THHVSKKPKLTRCISEAEIRDEFSH---------HQHGVARINNGSFG-----------------SC------------- 51 (452)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~ir~~~~~---------~~~~~~~l~~~~~~-----------------~~------------- 51 (452)
++++++...++.+..+....++... .+.++|+|+.|.+. ..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~ 89 (481)
T PTZ00377 10 INPRVVAAEYAVRGLVPARAAEIKEELKTGKGKYPFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLF 89 (481)
T ss_pred cCHHHhhhhhhcCChHHHHHHHHHHHHhcCCccCCcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCccccccC
Confidence 4455555566666666444433322 24689999988873 22
Q ss_pred cHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhC----CC-CCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 52 PKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLIN----AD-DVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 52 p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~----~~-~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
|..+++++.+.+.... .....|....+..++|++++++++ .+ ++++|++|+|+++++.+++.++
T Consensus 90 P~~~~~~~~~~~~~~~---~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l-------- 158 (481)
T PTZ00377 90 PADVVARAKEYLNAIG---GGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLL-------- 158 (481)
T ss_pred CHHHHHHHHHHHHhCC---CcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHh--------
Confidence 5567777765544321 112235556678888898998875 21 3789999999999999999977
Q ss_pred C-CCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCc
Q 012991 127 F-HRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPC 204 (452)
Q Consensus 127 ~-~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG 204 (452)
+ ++||+|++++|.|++....+ +..|.+++.+++. .++...+ +++|+++++.....+.++++|++++|+||||
T Consensus 159 ~~~~gD~Vlv~~P~y~~y~~~~----~~~g~~~v~v~~~--~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG 232 (481)
T PTZ00377 159 IGDPSDGVMIPIPQYPLYSAAI----TLLGGKQVPYYLD--EEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTG 232 (481)
T ss_pred ccCCCCEEEECCCCchhHHHHH----HHcCCEEEEEEec--cccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCC
Confidence 4 68999999999999876655 4469999998652 1222234 7899988853222234799999999999999
Q ss_pred cccc---HHHHHHHHHHcCCCEEEEecccccCCc----cc-cc----cccC-------ccEEEEcCcccCcCCCC--cEE
Q 012991 205 VVIP---VRKLVKICRDEGVDQVFVDAAHAMGSI----KI-DV----KEIG-------ADFYVSNLHKWFFCPPS--VAF 263 (452)
Q Consensus 205 ~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~----~~-~~----~~~~-------~d~~~~s~~K~l~g~~G--~G~ 263 (452)
.+++ +++|+++|++|++ ++|+|+++..... +. .+ ..+. .-+++.|+||.+++++| +|+
T Consensus 233 ~~~s~e~~~~i~~~a~~~~~-~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~ 311 (481)
T PTZ00377 233 QVLTRDVMEEIIKFCYEKGI-VLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGY 311 (481)
T ss_pred cCCCHHHHHHHHHHHHHCCC-EEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEE
Confidence 9998 6788999999999 7999999864211 11 11 0111 12566799997677666 788
Q ss_pred EEE---ecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHH-------HHhhcCHHHHHHHHHHHHHH
Q 012991 264 LYC---RKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFV-------SRFEGGIDGIMQRNHEQALK 333 (452)
Q Consensus 264 l~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~-------~~~~~g~~~~~~~~~~~~~~ 333 (452)
+++ ++++++. +. ... ... ..++...+.++..+++.. ..+......++++++++++.
T Consensus 312 ~~~~~~p~~li~~-l~-~~~-----------~~~-~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~ 377 (481)
T PTZ00377 312 FELTNIPPEVREQ-IY-KLA-----------SIN-LCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAEL 377 (481)
T ss_pred EEEeCCCHHHHHH-HH-HHh-----------hee-cCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 876 5666654 11 110 000 123333444444444210 00000123344456778888
Q ss_pred HHHHHHHHcCCCcCCCcccccceEEEEcCCccccC-----Chh-hHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCC
Q 012991 334 MARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVM-----GED-DALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARD 407 (452)
Q Consensus 334 l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~ 407 (452)
+.+.|.+++++.+..|++ ++++|+.++...... .+. +...++..+.++.||.+.++..+...
T Consensus 378 l~~~L~~~~g~~~~~p~g--g~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~---------- 445 (481)
T PTZ00377 378 LTDELNKIEGVSCQPVEG--AMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQK---------- 445 (481)
T ss_pred HHHHHhcCCCcEeecCCe--eEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCC----------
Confidence 899998877777766654 677776543100000 001 12344444545569999877665221
Q ss_pred CCCCccceEEecccccCCHHHHHHHHHHHHHHHhcc
Q 012991 408 KDGIITGYARISHQVYNTLEDYEKFRDAVILLVEEG 443 (452)
Q Consensus 408 ~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~~ 443 (452)
...+++|+|+. .+.++++..+++|+++++..
T Consensus 446 ---~~~~~~Rls~~--~~~e~l~~~l~rl~~~~~~~ 476 (481)
T PTZ00377 446 ---PGTYHFRITIL--PPEEQIEEMVKKIKEFHESF 476 (481)
T ss_pred ---CCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHH
Confidence 23469999998 47888999999999888753
No 60
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=3.1e-27 Score=232.03 Aligned_cols=335 Identities=16% Similarity=0.155 Sum_probs=232.9
Q ss_pred CCHHHHHhhhccCCCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEE
Q 012991 24 ISEAEIRDEFSHHQHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEIS 102 (452)
Q Consensus 24 ~~~~~ir~~~~~~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~ 102 (452)
.++....+++ .+..++.|+.+... ..|+.+.+++.+.......++.. ...++++.++++++++ +++|+
T Consensus 20 ~~~~~~~~~~--~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~--------~~~~lr~~ia~~~~~~-~~~i~ 88 (367)
T PRK02731 20 KPIEELVREY--GIADIIKLASNENPLGPSPKAIEAIRAAADELHRYPDG--------SGFELKAALAEKFGVD-PERII 88 (367)
T ss_pred CCHHHHHHhc--CCCceEEecCCCCCCCCCHHHHHHHHHHHHhhcCCCCC--------cHHHHHHHHHHHhCcC-HHHEE
Confidence 4554444445 35678888876432 34566888888876543222221 1368999999999996 78999
Q ss_pred EecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHh
Q 012991 103 LVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIE 182 (452)
Q Consensus 103 ~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~ 182 (452)
+|+|+++++.+++.++ +++||+|++++|.|...... +...|.+++.++. ++.+..++.+++.+
T Consensus 89 ~t~G~~~~l~~~~~~l--------~~~gd~vl~~~p~y~~~~~~----~~~~g~~~~~~~~----~~~~~~~~~l~~~~- 151 (367)
T PRK02731 89 LGNGSDEILELLARAY--------LGPGDEVIYSEHGFAVYPIA----AQAVGAKPVEVPA----KDYGHDLDAMLAAV- 151 (367)
T ss_pred EcCCHHHHHHHHHHHh--------cCCCCEEEEecCCHHHHHHH----HHHcCCeEEEecc----cCCCCCHHHHHHHh-
Confidence 9999999999988876 47899999999999654332 4557999998843 22222278898888
Q ss_pred ccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHc--CCCEEEEecccccCCc------ccccc-ccCccEEEEcCcc
Q 012991 183 KGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDE--GVDQVFVDAAHAMGSI------KIDVK-EIGADFYVSNLHK 253 (452)
Q Consensus 183 ~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~--~~~~~ivD~a~~~g~~------~~~~~-~~~~d~~~~s~~K 253 (452)
.+++++|++++++||||.++|.++|.++++.+ ++ ++|+|+++..... .++.. ...-.+++.|++|
T Consensus 152 -----~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~-~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 225 (367)
T PRK02731 152 -----TPRTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDV-LVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSK 225 (367)
T ss_pred -----CCCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCc-EEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehH
Confidence 46889999999999999999999999999875 89 7999999754321 11111 1123467779999
Q ss_pred cCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHH
Q 012991 254 WFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQA 331 (452)
Q Consensus 254 ~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~ 331 (452)
. +|.+| +|++++++++++. + ...... ...+. .+..++...+.. ....+.++++.++++
T Consensus 226 ~-~g~~G~RiG~l~~~~~~~~~-l-~~~~~~-------------~~~~~---~~~~~a~~~l~~-~~~~~~~~~~~~~~~ 285 (367)
T PRK02731 226 A-YGLAGLRVGYGIAPPEIIDA-L-NRVRQP-------------FNVNS---LALAAAVAALDD-DAFVEKSRALNAEGM 285 (367)
T ss_pred h-hcCcccceeeeeCCHHHHHH-H-HHccCC-------------CCCCH---HHHHHHHHHhCC-HHHHHHHHHHHHHHH
Confidence 5 66555 6999998877764 1 111000 01111 223333444332 113567777888888
Q ss_pred HHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCC
Q 012991 332 LKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGI 411 (452)
Q Consensus 332 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~ 411 (452)
+.+.+.|.+. ++.+. ++. ++++|+.++ +..++.++.+.|.+ +||.++.+..+ .
T Consensus 286 ~~l~~~L~~~-g~~~~-~~~--g~~~~i~~~------~~~~~~~~~~~L~~-~gI~v~~~~~~----------------~ 338 (367)
T PRK02731 286 AWLTEFLAEL-GLEYI-PSV--GNFILVDFD------DGKDAAEAYQALLK-RGVIVRPVAGY----------------G 338 (367)
T ss_pred HHHHHHHHHC-CCccC-CCC--ceEEEEECC------CCCCHHHHHHHHHH-CCEEEEeCCCC----------------C
Confidence 8999999887 76654 333 778899885 34577889999976 59999765432 1
Q ss_pred ccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 412 ITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 412 ~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
.++++|++++ +.+|+++++++|+++++.
T Consensus 339 ~~~~iRis~~---~~~e~~~l~~aL~~~~~~ 366 (367)
T PRK02731 339 LPNALRITIG---TEEENRRFLAALKEFLAA 366 (367)
T ss_pred CCCeEEEecC---CHHHHHHHHHHHHHHHhc
Confidence 2469999997 789999999999998753
No 61
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.96 E-value=1.8e-27 Score=235.94 Aligned_cols=344 Identities=14% Similarity=0.121 Sum_probs=228.4
Q ss_pred CCCeEEeccCCCC--CCcHHHHHHHHHHHHHHhcCCchhhh--hhhhHHHHHHHHHHHhHhCCC-CC-CcEEEecChhHH
Q 012991 37 QHGVARINNGSFG--SCPKSVLADQQKWQLKFLQQPDDFYF--NSLRKGILESRAAVKDLINAD-DV-GEISLVDNATTA 110 (452)
Q Consensus 37 ~~~~~~l~~~~~~--~~p~~v~e~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~la~~~~~~-~~-~~i~~t~g~t~a 110 (452)
..+.++|+.+.+. ..|+.+.+++.+.+... ....|+ .+..++.+.+.+.+++.+|.+ ++ ++|++|+|++++
T Consensus 38 ~~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~---~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~a 114 (405)
T PRK06207 38 PGRPVDFSHGDVDAHEPTPGAFELFSAGVERG---GVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGA 114 (405)
T ss_pred CCCceecCCcCCCCCCCCHHHHHHHHHHHhcC---CCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHH
Confidence 4568899988776 35566777777665321 111121 223334445555555555853 35 799999999999
Q ss_pred HHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCC-CCChHHH-HHHHHHHHhccccCC
Q 012991 111 AAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFP-LASEEEI-INEFKKGIEKGKKDG 188 (452)
Q Consensus 111 ~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~-~~~~~~~-~~~l~~~i~~~~~~~ 188 (452)
+.+++.++ +++||+|++++|.|+.....+ +..|.+++.++++.. .+++..+ +++|++++ .
T Consensus 115 l~~~~~~l--------~~~Gd~Vlv~~P~y~~~~~~~----~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~------~ 176 (405)
T PRK06207 115 LFLAVAAT--------VARGDKVAIVQPDYFANRKLV----EFFEGEMVPVQLDYLSADKRAGLDLDQLEEAF------K 176 (405)
T ss_pred HHHHHHHh--------cCCCCEEEEeCCCchhHHHHH----HHcCCEEEEEeccccCcccCCCcCHHHHHHhh------h
Confidence 99999976 589999999999998765444 556999998876311 1122334 89999988 4
Q ss_pred CceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCc----cccccc----cCccEEEEcCcccCcC
Q 012991 189 KMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSI----KIDVKE----IGADFYVSNLHKWFFC 257 (452)
Q Consensus 189 ~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~----~~~~~~----~~~d~~~~s~~K~l~g 257 (452)
+++++|++++|+||||.+++ +++|+++|+++|+ ++|+|++++.... ...+.. .+.-+++.|++|. ++
T Consensus 177 ~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~-~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~-~~ 254 (405)
T PRK06207 177 AGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGA-TVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKT-ES 254 (405)
T ss_pred hcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCC-EEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhh-cc
Confidence 57899999999999999998 5578888999999 7999999874221 111111 1223788899996 66
Q ss_pred CCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 012991 258 PPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMA 335 (452)
Q Consensus 258 ~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~ 335 (452)
.+| +|+++.++++++. + ..... .+....+...+.++ ..++.+-.+-++...++.++.++.+.
T Consensus 255 lpGlRiG~ii~~~~l~~~-~-~~~~~-----------~~~~~~~~~~q~a~---~~~l~~~~~~~~~~~~~~~~~r~~l~ 318 (405)
T PRK06207 255 LSGYRLGVAFGSPAIIDR-M-EKLQA-----------IVSLRAAGYSQAVL---RTWFSEPDGWMKDRIARHQAIRDDLL 318 (405)
T ss_pred CcccceEEEEcCHHHHHH-H-HHHHh-----------HhccCCCHHHHHHH---HHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 667 8999888877765 1 11100 00011111222222 23332200014555666677788888
Q ss_pred HHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccce
Q 012991 336 RMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGY 415 (452)
Q Consensus 336 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (452)
+.|.+++++++..|.+ ++++|+.++. ...+..++.+.|.+++||.+.++..+.. ..+++
T Consensus 319 ~~L~~~~~~~~~~p~g--g~fl~~~l~~-----~~~~~~~~~~~l~~~~gV~v~pG~~F~~--------------~~~~~ 377 (405)
T PRK06207 319 RVLRGVEGVFVRAPQA--GSYLFPRLPR-----LAVSLHDFVKILRLQAGVIVTPGTEFSP--------------HTADS 377 (405)
T ss_pred HHHhcCCCceecCCCe--eEEEEEeCcc-----cCCCHHHHHHHHHHhcCEEEeCchHhCC--------------CCCCe
Confidence 8887766666655544 7889998862 1246678999887557999987765422 23579
Q ss_pred EEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 416 ARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 416 iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
+|||++. +.++++..+++|++.++.
T Consensus 378 ~Ris~~~--~~~~l~~al~rl~~~l~~ 402 (405)
T PRK06207 378 IRLNFSQ--DHAAAVAAAERIAQLIER 402 (405)
T ss_pred EEEEecC--CHHHHHHHHHHHHHHHHH
Confidence 9999985 688899999999888754
No 62
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.96 E-value=1.2e-27 Score=236.47 Aligned_cols=340 Identities=16% Similarity=0.108 Sum_probs=228.8
Q ss_pred hhhccCCCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh----CCC-CCC-cEEE
Q 012991 31 DEFSHHQHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI----NAD-DVG-EISL 103 (452)
Q Consensus 31 ~~~~~~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~-~~~-~i~~ 103 (452)
++....+++++.|+.+.+. ..|+.+.+++.+.+... ....|....+..++|+++++++ |.+ +++ +|++
T Consensus 24 ~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~ 98 (385)
T PRK09276 24 AEKIARGVDVISLGIGDPDLPTPDHIIEAMCKAVEDP-----ENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVIS 98 (385)
T ss_pred HHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhCC-----CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE
Confidence 3333356778999988766 45667888887765421 1112333344677778788876 432 244 5888
Q ss_pred ecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHh
Q 012991 104 VDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIE 182 (452)
Q Consensus 104 t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~ 182 (452)
|+|+++++..++.++ +++||+|++++|.|+.....+ +..|.+++.+++.. ++...+ ++.+++.+
T Consensus 99 t~G~~~~i~~~~~~~--------~~~gd~Vl~~~P~y~~~~~~~----~~~g~~~~~v~~~~--~~g~~~d~~~l~~~~- 163 (385)
T PRK09276 99 LIGSKEGIAHIPLAF--------VNPGDVVLVPDPGYPVYKIGT----IFAGGEPYFMPLKE--ENGFLPDLDAIPEDV- 163 (385)
T ss_pred ccCcHHHHHHHHHHh--------CCCCCEEEEcCCCCcChHHHH----HHcCCEEEEEecCC--CCCCcCCHHHHHHhc-
Confidence 999999999999876 589999999999998765444 44699999986521 112233 77888777
Q ss_pred ccccCCCceEEEEEeccCCCCcccccH---HHHHHHHHHcCCCEEEEecccccCCc----ccccc---c-cCccEEEEcC
Q 012991 183 KGKKDGKMIRLAIIDHITSMPCVVIPV---RKLVKICRDEGVDQVFVDAAHAMGSI----KIDVK---E-IGADFYVSNL 251 (452)
Q Consensus 183 ~~~~~~~~~~lv~~~~~~n~tG~~~~l---~~i~~l~~~~~~~~~ivD~a~~~g~~----~~~~~---~-~~~d~~~~s~ 251 (452)
.+++++|++++|+||||.+++. ++|+++|++|++ ++|+|+++..... ...+. . .+..+++.|+
T Consensus 164 -----~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~-~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 237 (385)
T PRK09276 164 -----AKKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDI-IVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSL 237 (385)
T ss_pred -----cccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCc-EEEEecchhheecCCCCCCChhccCCCcCCEEEEecc
Confidence 4688999999999999999985 678888999999 7999999864221 11111 1 1235778899
Q ss_pred cccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHH
Q 012991 252 HKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHE 329 (452)
Q Consensus 252 ~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~ 329 (452)
+|. +|++| +|++++++++++. + ...... .....+...+.++..+++.... -++.+++++++
T Consensus 238 SK~-~g~~GlRiG~~i~~~~l~~~-~-~~~~~~-----------~~~~~~~~~q~~~~~~l~~~~~---~~~~~~~~~~~ 300 (385)
T PRK09276 238 SKT-YNMTGWRIGFAVGNADLIAG-L-GKVKSN-----------VDSGVFQAIQEAGIAALNGPQE---VVEELRKIYQE 300 (385)
T ss_pred hhh-cCCcchhheeeeCCHHHHHH-H-HHHHhh-----------ccCCCCHHHHHHHHHHHcCcHH---HHHHHHHHHHH
Confidence 995 78888 8999988877765 1 111000 0011111222222333322122 35677778888
Q ss_pred HHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCC
Q 012991 330 QALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKD 409 (452)
Q Consensus 330 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~ 409 (452)
+++.+.+.|.+. ++++..+.. +.++|+.++ +..+..++.+.|.+++||.+.++..+..
T Consensus 301 ~~~~l~~~L~~~-~~~~~~~~~--~~~~~v~~~------~~~~~~~l~~~ll~~~gi~v~~g~~f~~------------- 358 (385)
T PRK09276 301 RRDILVEGLRKL-GLEVEPPKA--TFYVWAPVP------KGYTSAEFATLLLDKAGVVVTPGNGFGE------------- 358 (385)
T ss_pred HHHHHHHHHHhC-CCcccCCCc--ceEEEEECC------CCCCHHHHHHHHHHhCCEEECCchhhCC-------------
Confidence 899999999886 777665543 667888886 3456778888876656999987655421
Q ss_pred CCccceEEecccccCCHHHHHHHHHHHHH
Q 012991 410 GIITGYARISHQVYNTLEDYEKFRDAVIL 438 (452)
Q Consensus 410 ~~~~~~iRis~~~~~t~~di~~l~~~l~~ 438 (452)
..++++||+++. +++++...++.|++
T Consensus 359 -~~~~~~Ris~~~--~~~~l~~~l~~l~~ 384 (385)
T PRK09276 359 -YGEGYFRIALTV--PDERIEEAVERIKK 384 (385)
T ss_pred -CCCCeEEEEeCC--CHHHHHHHHHHHhh
Confidence 225799999974 67777777777654
No 63
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.96 E-value=2.3e-27 Score=234.24 Aligned_cols=335 Identities=18% Similarity=0.146 Sum_probs=227.0
Q ss_pred CCCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh----CCC-CCC-cEEEecChh
Q 012991 36 HQHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI----NAD-DVG-EISLVDNAT 108 (452)
Q Consensus 36 ~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~-~~~-~i~~t~g~t 108 (452)
.++.++.|+.+.++ ..|+.+.+++.+.+.. + ....|....+..++|+.+++++ |.+ +++ +|++|+|++
T Consensus 27 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~ 101 (383)
T TIGR03540 27 EGVDVISLGIGDPDLPTPKHIVEALCKAAEN----P-ENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSK 101 (383)
T ss_pred cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhC----C-CCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcH
Confidence 45788999988776 4567788888876532 1 1112333344566777777765 342 234 688999999
Q ss_pred HHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccC
Q 012991 109 TAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKD 187 (452)
Q Consensus 109 ~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~ 187 (452)
+++..++.++ +++||+|++++|+|+.....+ +..|.++..+++.. ++...+ ++++++.+
T Consensus 102 ~~l~~~~~~~--------~~~gd~vlv~~P~y~~~~~~~----~~~G~~v~~v~~~~--~~g~~~d~~~l~~~~------ 161 (383)
T TIGR03540 102 EGIAHIPLAF--------VNPGDIVLVPDPGYPVYRIGT----LFAGGEPYEMPLKE--ENGFLPDFDAIPEDI------ 161 (383)
T ss_pred HHHHHHHHHh--------CCCCCEEEEeCCCCcchHHHH----HhcCCEEEEEecCc--ccCCccCHHHHHhhc------
Confidence 9999999876 589999999999998865554 45699999996521 111233 78888887
Q ss_pred CCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCC----ccccccc----cCccEEEEcCcccCc
Q 012991 188 GKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGS----IKIDVKE----IGADFYVSNLHKWFF 256 (452)
Q Consensus 188 ~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~----~~~~~~~----~~~d~~~~s~~K~l~ 256 (452)
.+++++|++++|+||||.+++ +++|+++|++|++ ++|+|++++... ....+.. .+..+++.|++|. +
T Consensus 162 ~~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~-~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~-~ 239 (383)
T TIGR03540 162 AKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNI-IVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKT-Y 239 (383)
T ss_pred cccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCE-EEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccc-c
Confidence 467899999999999999998 5788899999999 799999986321 1122111 1234778899995 7
Q ss_pred CCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 012991 257 CPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKM 334 (452)
Q Consensus 257 g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l 334 (452)
|.+| +|+++.++++++. + ..... ......+...+.++..+++.... -.+.+++.++++++.+
T Consensus 240 g~~GlRiG~~i~~~~l~~~-~-~~~~~-----------~~~~~~~~~~q~~~~~~l~~~~~---~~~~~~~~~~~~~~~~ 303 (383)
T TIGR03540 240 NMTGWRIGMAVGNADLIAG-L-GKVKT-----------NVDSGVFQAIQYAAIAALNGPQD---VVKEIRKIYQRRRDLL 303 (383)
T ss_pred CCccceeeEEeCCHHHHHH-H-HHHHH-----------hcccCCChHHHHHHHHHHhCCHH---HHHHHHHHHHHHHHHH
Confidence 7777 8999888877765 1 11100 00011222223333333322111 2556677788889999
Q ss_pred HHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccc
Q 012991 335 ARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITG 414 (452)
Q Consensus 335 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (452)
.+.|.+. ++.+..+.+ +.++|+.++ ++.+..++.+.|.+++||.+.++..+.. ..++
T Consensus 304 ~~~L~~~-~~~~~~~~~--~~~~~~~l~------~~~~~~~~~~~ll~~~gi~v~~g~~f~~--------------~~~~ 360 (383)
T TIGR03540 304 LEALKKI-GIDVEKPKA--TFYVWVPVP------EGYTSAEFAARLLEETGVVVTPGVGFGE--------------YGEG 360 (383)
T ss_pred HHHHHhC-CCEecCCCc--ceEEEEECC------CCCCHHHHHHHHHHHCCEEEecchhhCc--------------cCCC
Confidence 9999887 777665543 667888887 3556778888876556999987765522 2357
Q ss_pred eEEecccccCCHHHHHHHHHHHHH
Q 012991 415 YARISHQVYNTLEDYEKFRDAVIL 438 (452)
Q Consensus 415 ~iRis~~~~~t~~di~~l~~~l~~ 438 (452)
++|++++. +.++++..++.|++
T Consensus 361 ~~Ris~~~--~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 361 YIRISLTV--PDERLEEAVARIKK 382 (383)
T ss_pred eEEEEecC--CHHHHHHHHHHHhh
Confidence 99999974 67777777776653
No 64
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.96 E-value=6.8e-27 Score=229.12 Aligned_cols=335 Identities=15% Similarity=0.162 Sum_probs=230.5
Q ss_pred CCCCeEEeccCCC-C-CCcHHHHHHHHHHHHHHhcC-CchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHH
Q 012991 36 HQHGVARINNGSF-G-SCPKSVLADQQKWQLKFLQQ-PDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAA 112 (452)
Q Consensus 36 ~~~~~~~l~~~~~-~-~~p~~v~e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~ 112 (452)
.++.++.|+.+.+ + +.|+.+.+++.+.+..+... ......++..+...++++.++++++.+ +.+++++| ++++.
T Consensus 14 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~--~~i~~~~G-~~~~~ 90 (360)
T TIGR00858 14 DGRRLLNFSSNDYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGTE--AALLFSSG-YLANV 90 (360)
T ss_pred CCceEEecccCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCC--CEEEECch-HHHHH
Confidence 4667888877753 4 46677999999887653211 111111333466788999999999874 66666666 55655
Q ss_pred HHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceE
Q 012991 113 IVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIR 192 (452)
Q Consensus 113 ~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~ 192 (452)
.++.++ +++||+|+++++.|.+....+. ..|.+++.++ ..+ .+.+++.++... +.+++
T Consensus 91 ~~l~~~--------~~~gd~v~~~~~~~~~~~~~~~----~~g~~~~~~~----~~d----~~~l~~~~~~~~--~~~~~ 148 (360)
T TIGR00858 91 GVISAL--------VGKGDLILSDALNHASLIDGCR----LSGARVRRYR----HND----VEHLERLLEKNR--GERRK 148 (360)
T ss_pred HHHHHh--------CCCCCEEEEEccccHHHHHHHH----hcCCceEEec----CCC----HHHHHHHHHHcc--cCCCe
Confidence 566654 4789999999999998766653 4588888773 222 577777775310 14678
Q ss_pred EEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCcccc---------ccccCccEEEEcCcccCcCCCCcEE
Q 012991 193 LAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKID---------VKEIGADFYVSNLHKWFFCPPSVAF 263 (452)
Q Consensus 193 lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~---------~~~~~~d~~~~s~~K~l~g~~G~G~ 263 (452)
+|++++++|++|...|+++|.++|+++|+ ++|+|++|+.+..+.+ +...+.|+++.|++|+ +++.| |+
T Consensus 149 ~v~~~~~~~~~G~~~~~~~i~~l~~~~~~-~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~-~~~~g-G~ 225 (360)
T TIGR00858 149 LIVTDGVFSMDGDIAPLPQLVALAERYGA-WLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKA-LGSYG-AY 225 (360)
T ss_pred EEEEeCCccCCCCCcCHHHHHHHHHHcCc-EEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhh-hhccC-cE
Confidence 99999999999999999999999999999 8999999987654321 2223568999999997 66777 88
Q ss_pred EEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcC
Q 012991 264 LYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWG 343 (452)
Q Consensus 264 l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~ 343 (452)
++.+++++.. + ...... ....+..+...+.++.+++++... .+.++++++++++++.+.|.++ +
T Consensus 226 ~~~~~~~~~~-~-~~~~~~---------~~~~~~~~~~~~~a~~~al~~~~~----~~~~~~~~~~~~~~l~~~L~~~-~ 289 (360)
T TIGR00858 226 VAGSQALIDY-L-INRART---------LIFSTALPPAVAAAALAALELIQE----EPWRREKLLALIARLRAGLEAL-G 289 (360)
T ss_pred EEcCHHHHHH-H-HHhCcc---------ceecCCCCHHHHHHHHHHHHHHhh----CHHHHHHHHHHHHHHHHHHHHc-C
Confidence 8887776654 1 111000 000112222334445556665553 3567889999999999999886 6
Q ss_pred CCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEeccccc
Q 012991 344 TSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVY 423 (452)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~ 423 (452)
+++..+ . ++++++.++ ...+..++.+.|.+ +||.+..+..+.. ...++++|++++.+
T Consensus 290 ~~~~~~-~--~~~~~~~~~------~~~~~~~~~~~l~~-~gI~v~~~~~~~~-------------~~~~~~iRis~~~~ 346 (360)
T TIGR00858 290 FTLMPS-C--TPIVPVIIG------DNASALALAEELQQ-QGIFVGAIRPPTV-------------PAGTSRLRLTLSAA 346 (360)
T ss_pred CccCCC-C--CCEEEEEeC------CHHHHHHHHHHHHH-CCeeEeeeCCCCC-------------CCCCceEEEEEcCC
Confidence 665432 2 668888775 23467789999976 4999965433211 12246899999999
Q ss_pred CCHHHHHHHHHHHH
Q 012991 424 NTLEDYEKFRDAVI 437 (452)
Q Consensus 424 ~t~~di~~l~~~l~ 437 (452)
++.+|+++++++|+
T Consensus 347 ~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 347 HTPGDIDRLAEALK 360 (360)
T ss_pred CCHHHHHHHHHhhC
Confidence 99999999999874
No 65
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=4.1e-27 Score=229.42 Aligned_cols=321 Identities=17% Similarity=0.154 Sum_probs=225.0
Q ss_pred CeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHH
Q 012991 39 GVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQ 117 (452)
Q Consensus 39 ~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~ 117 (452)
..+.|+.+.+. +.|+.+++++.+.+... .. . .+. .....++|+.++++++++ +++|++|+|+++++.+++.+
T Consensus 23 ~~~~l~~~~~~~~~p~~~~~a~~~~~~~~--~~-~--~y~-~~~~~~lr~~ia~~~~~~-~~~i~it~G~~~~l~~~~~~ 95 (351)
T PRK14807 23 YKYKMDANETPFELPEEVIKNIQEIVKSS--QV-N--IYP-DPTAEKLREELARYCSVV-PTNIFVGNGSDEIIHLIMLA 95 (351)
T ss_pred ceeEccCCCCCCCCCHHHHHHHHHHhhcC--cc-c--CCC-CccHHHHHHHHHHHhCCC-cccEEEecCHHHHHHHHHHH
Confidence 35678777766 57788999988766421 11 1 122 223588999999999996 78999999999999999987
Q ss_pred hhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEE
Q 012991 118 IGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAII 196 (452)
Q Consensus 118 l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~ 196 (452)
+ +++||+|++++|.|...... ++..|.+++.+++ ++++.+ +++++++++ ..++++|++
T Consensus 96 l--------~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~v~~----~~~~~~d~~~l~~~~~-----~~~~k~v~l 154 (351)
T PRK14807 96 F--------INKGDVVIYPHPSFAMYSVY----SKIAGAVEIPVKL----KEDYTYDVGSFIKVIE-----KYQPKLVFL 154 (351)
T ss_pred h--------cCCCCEEEEeCCChHHHHHH----HHHcCCeEEEeec----CCCCCCCHHHHHHHhh-----ccCCCEEEE
Confidence 6 58999999999999764332 4567999999854 333334 788998884 248999999
Q ss_pred eccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCC--cccc-ccccCccEEEEcCcccCcCCCC--cEEEEEecCcc
Q 012991 197 DHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGS--IKID-VKEIGADFYVSNLHKWFFCPPS--VAFLYCRKSIL 271 (452)
Q Consensus 197 ~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~--~~~~-~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~ 271 (452)
++++||||..++.+++.++|++++. ++|+|+++..-. ...+ .....-.+++.|++|. +|.+| +|+++.+++++
T Consensus 155 ~~p~NPtG~~~~~~~l~~l~~~~~~-~~ivDe~y~~~~~~~~~~~~~~~~~vi~~~S~SK~-~~~~GlRiG~~v~~~~~~ 232 (351)
T PRK14807 155 CNPNNPTGSVIEREDIIKIIEKSRG-IVVVDEAYFEFYGNTIVDVINEFENLIVLRTLSKA-FGLAGLRVGYAVANENIL 232 (351)
T ss_pred eCCCCCCCCCCCHHHHHHHHHhCCC-EEEEeCcchhhcccchHHHhhhCCCEEEEecchHh-cccchhceeeeecCHHHH
Confidence 9999999999999999999999898 799999985321 1111 1122345788899996 66666 88988877776
Q ss_pred ccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcc
Q 012991 272 SSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPE 351 (452)
Q Consensus 272 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 351 (452)
+. + ..... ....+...+.+ +..++... .+++..++++++++.+.+.|.+++++.+. +++
T Consensus 233 ~~-~-~~~~~-------------~~~~~~~~q~~---~~~~l~~~--~~~~~~~~~~~~r~~l~~~l~~~~g~~~~-~~~ 291 (351)
T PRK14807 233 KY-L-NLVKS-------------PYNINSLSQVI---ALKVLRTG--VLKERVNYILNERERLIKELSKIPGIKVY-PSK 291 (351)
T ss_pred HH-H-HHccC-------------CCCcCHHHHHH---HHHHHhHH--HHHHHHHHHHHHHHHHHHHHHhCCCcEEC-cCC
Confidence 64 1 11100 01112222222 33333321 35666667778888898888877677654 333
Q ss_pred cccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHH
Q 012991 352 ICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEK 431 (452)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~ 431 (452)
++++|+.++ +..++.+.|.+ +||.++.+... ...++++||+++ +.++.++
T Consensus 292 --~~~~~i~~~---------~~~~~~~~l~~-~gV~v~~~~~~---------------~~~~~~iRis~~---~~~~~~~ 341 (351)
T PRK14807 292 --TNFILVKFK---------DADYVYQGLLE-RGILVRDFSKV---------------EGLEGALRITVS---SCEANDY 341 (351)
T ss_pred --ccEEEEEcC---------CHHHHHHHHHH-CCEEEEECCCC---------------CCCCCeEEEEcC---CHHHHHH
Confidence 668888775 35678888876 49999653221 123579999998 6888999
Q ss_pred HHHHHHHHH
Q 012991 432 FRDAVILLV 440 (452)
Q Consensus 432 l~~~l~~~~ 440 (452)
++++|++++
T Consensus 342 l~~~l~~~~ 350 (351)
T PRK14807 342 LINGLKELL 350 (351)
T ss_pred HHHHHHHhh
Confidence 999998864
No 66
>PRK07324 transaminase; Validated
Probab=99.96 E-value=8.4e-28 Score=235.88 Aligned_cols=338 Identities=13% Similarity=0.080 Sum_probs=229.1
Q ss_pred hccCCCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhC-CCCCCcEEEecChhHH
Q 012991 33 FSHHQHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLIN-ADDVGEISLVDNATTA 110 (452)
Q Consensus 33 ~~~~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~i~~t~g~t~a 110 (452)
+...+++++.|..+.+. ..|..+ +++.+.+... ...|....+..++|+.++++++ ++ +++|++|+|+++|
T Consensus 21 ~~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~------~~~Y~~~~G~~~lr~~ia~~~~~~~-~~~vi~t~G~~~a 92 (373)
T PRK07324 21 YDIAESCIDSLTLEELLALAGKNP-EAFYQELGQK------KLTYGWIEGSPEFKEAVASLYQNVK-PENILQTNGATGA 92 (373)
T ss_pred cccccCCCCCCcHHHHHhccCcch-HHHHHHHhcC------CccCCCCCCCHHHHHHHHHHhcCCC-hhhEEEcCChHHH
Confidence 33357788888877765 455556 6665554321 1123344567889999999885 54 7899999999999
Q ss_pred HHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCC
Q 012991 111 AAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGK 189 (452)
Q Consensus 111 ~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~ 189 (452)
+.+++.++ +.+||+|+++.|.|.+.... ++..|++++.+++.. +....+ ++++++.+ .+
T Consensus 93 l~~~~~~l--------~~~gd~Vl~~~P~y~~~~~~----~~~~g~~v~~v~~~~--~~~~~~d~~~l~~~~------~~ 152 (373)
T PRK07324 93 NFLVLYAL--------VEPGDHVISVYPTYQQLYDI----PESLGAEVDYWQLKE--ENGWLPDLDELRRLV------RP 152 (373)
T ss_pred HHHHHHHh--------CCCCCEEEEcCCCchhHHHH----HHHcCCEEEEEeccc--ccCCCCCHHHHHHhC------CC
Confidence 99999977 58999999999999876444 455799999996531 111223 78888877 57
Q ss_pred ceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCcc---ccccc-cCccEEEEcCcccCcCCCC--
Q 012991 190 MIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSIK---IDVKE-IGADFYVSNLHKWFFCPPS-- 260 (452)
Q Consensus 190 ~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~~---~~~~~-~~~d~~~~s~~K~l~g~~G-- 260 (452)
++++|++++++||||.+++ +++|+++|++||+ ++|+|++++.-... ..+.. .+-.+++.|++|. +|.+|
T Consensus 153 ~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~-~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~-~~~~G~R 230 (373)
T PRK07324 153 NTKLICINNANNPTGALMDRAYLEEIVEIARSVDA-YVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKT-YSLPGIR 230 (373)
T ss_pred CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCC-EEEEEccccccccCCCCCChhhccCCEEEEecchhh-cCCccce
Confidence 8999999999999999998 7888999999999 79999987532211 11111 1224677899996 67667
Q ss_pred cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHH
Q 012991 261 VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLAN 340 (452)
Q Consensus 261 ~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~ 340 (452)
+|+++++++++.. + ..... ....+.+.....+...+++.... -++..++.++++++.+.+.|.+
T Consensus 231 iG~i~~~~~li~~-~-~~~~~-----------~~~~~~~~~~q~~a~~~l~~~~~---~l~~~~~~~~~~~~~l~~~l~~ 294 (373)
T PRK07324 231 VGWIAANEEVIDI-L-RKYRD-----------YTMICAGVFDDMLASLALEHRDA---ILERNRKIVRTNLAILDEWVAK 294 (373)
T ss_pred eEEEecCHHHHHH-H-HHHhC-----------cEEecCChHHHHHHHHHHcCHHH---HHHHHHHHHHHHHHHHHHHHhc
Confidence 7998887777664 1 11100 00011222222222233332222 2455566667777778888877
Q ss_pred HcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecc
Q 012991 341 AWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISH 420 (452)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~ 420 (452)
.+++....|.. ++++++.++ ...+..++++.|.+++||.+.++..+ ..++++|||+
T Consensus 295 ~~~~~~~~p~g--g~~~~i~~~------~~~~~~~~~~~ll~~~gv~v~pg~~F----------------~~~~~iRis~ 350 (373)
T PRK07324 295 EPRVSYVKPKA--VSTSFVKLD------VDMPSEDFCLKLLKETGVLLVPGNRF----------------DLEGHVRIGY 350 (373)
T ss_pred CCCceEECCCc--eEEEEEEeC------CCCCHHHHHHHHHHhcCEEEECcccc----------------CCCCeEEEEe
Confidence 65666555544 455566664 23466788888766679999876654 2347999999
Q ss_pred cccCCHHHHHHHHHHHHHHHhc
Q 012991 421 QVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 421 ~~~~t~~di~~l~~~l~~~~~~ 442 (452)
+. +++.++..+++|++++++
T Consensus 351 ~~--~~~~l~~~l~rl~~~l~~ 370 (373)
T PRK07324 351 CC--DTETLKKGLKKLSEFLRE 370 (373)
T ss_pred cC--CHHHHHHHHHHHHHHHHh
Confidence 75 688899999999998865
No 67
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.96 E-value=4.1e-27 Score=229.83 Aligned_cols=338 Identities=10% Similarity=0.071 Sum_probs=226.9
Q ss_pred CCHHHHHhhhccCCCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEE
Q 012991 24 ISEAEIRDEFSHHQHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEIS 102 (452)
Q Consensus 24 ~~~~~ir~~~~~~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~ 102 (452)
.++....+.+...+.+++.|+.+... ..|+.+.+++.+.+..... |+ .....++|++++++++++ +++|+
T Consensus 6 ~~~~~~~~~~~~~~~~~i~l~~~~~~~~~p~~~~~a~~~~~~~~~~-----y~---~~~~~~lr~~ia~~~~~~-~~~i~ 76 (356)
T PRK08056 6 GNIREAATVLGISPDQLLDFSANINPLGMPVSLKRAIIDNLDCAER-----YP---DVEYRHLHQALARHHQVP-ASWIL 76 (356)
T ss_pred ccHHHHHHHhCCChhhEEEeccccCCCCCCHHHHHHHHHHHHhccc-----Cc---CccHHHHHHHHHHHhCcC-hhhEE
Confidence 34444444555445678999877554 6777799999876654321 21 123689999999999996 89999
Q ss_pred EecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHh
Q 012991 103 LVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIE 182 (452)
Q Consensus 103 ~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~ 182 (452)
+|+|+++++..++.++ .+|+ +++..|.|...... ++..|.+++.+++.. ++...+-+++++.+
T Consensus 77 it~Ga~~~l~~~~~~l---------~~g~-viv~~P~y~~~~~~----~~~~g~~~~~v~~~~--~~~~~~~~~~~~~~- 139 (356)
T PRK08056 77 AGNGETESIFAVVSGL---------KPRR-AMIVTPGFAEYRRA----LQQVGCEIRRYSLRE--ADGWQLTDAILEAL- 139 (356)
T ss_pred ECCCHHHHHHHHHHHh---------CCCC-EEEeCCCcHHHHHH----HHHcCCeEEEEeccc--ccCCCccHHHHHhc-
Confidence 9999999999998864 5665 67778888765443 455799999996521 11111123455555
Q ss_pred ccccCCCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCc----ccc-ccccCccEEEEcCccc
Q 012991 183 KGKKDGKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSI----KID-VKEIGADFYVSNLHKW 254 (452)
Q Consensus 183 ~~~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~----~~~-~~~~~~d~~~~s~~K~ 254 (452)
.+++++|++++|+||||.+++ +++|+++|+++++ ++|+|+++.--.. ..+ +...+.++++.|+||+
T Consensus 140 -----~~~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~-~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 213 (356)
T PRK08056 140 -----TPDLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNI-ALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKF 213 (356)
T ss_pred -----cCCCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCC-EEEEecchhccCCcchHHHHHhccCCCEEEEEechhh
Confidence 468899999999999999999 6778999999999 7999998643211 011 2223456888999996
Q ss_pred CcCCCC--cEEEEEe-cCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHH
Q 012991 255 FFCPPS--VAFLYCR-KSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQA 331 (452)
Q Consensus 255 l~g~~G--~G~l~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~ 331 (452)
+|++| +|+++++ ++++.. +. .... ..+.+...+ .++...+.. ..-.+.+++.+++.+
T Consensus 214 -~~~~G~RiG~~v~~~~~~~~~-l~-~~~~-------------~~~~~~~~~---~~a~~~l~~-~~~~~~~~~~~~~~r 273 (356)
T PRK08056 214 -YAIPGLRLGYLVNSDDAAVAR-MR-RQQM-------------PWSINAFAA---LAGEVILQD-RAYQQATWQWLAEEG 273 (356)
T ss_pred -ccCcchhheeeecCCHHHHHH-HH-HhCC-------------CCchhHHHH---HHHHHHhCC-HHHHHHHHHHHHHHH
Confidence 77666 8888874 344443 11 1000 011122222 222222221 012456677788889
Q ss_pred HHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCC
Q 012991 332 LKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGI 411 (452)
Q Consensus 332 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~ 411 (452)
+++.+.|.+++++.+. ++. ++++|+.++. +..++++.|.+ .||.++.+..+.+ .
T Consensus 274 ~~l~~~L~~~~~~~~~-~~~--~~~~~~~~~~--------~~~~~~~~l~~-~gI~v~~~~~f~~--------------~ 327 (356)
T PRK08056 274 ARFYQALCALPLLTVW-PGR--ANYLFLRCER--------PDIDLQRALLT-QRILIRSCANYPG--------------L 327 (356)
T ss_pred HHHHHHHhcCCCcEEc-CCC--CcEEEEEcCC--------ChHHHHHHHHH-CCeEEEECCCCCC--------------C
Confidence 9999999877666554 333 6788887751 34578888876 5999987665421 3
Q ss_pred ccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 412 ITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 412 ~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
.++++||+++ +.++.++++++|+++++.
T Consensus 328 ~~~~iRis~~---~~~~~~~l~~~l~~~~~~ 355 (356)
T PRK08056 328 DSRYYRVAIR---SAAENERLLAALRNVLTG 355 (356)
T ss_pred CCCEEEEEEc---CHHHHHHHHHHHHHHHcc
Confidence 3579999998 789999999999998754
No 68
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=2.6e-27 Score=232.12 Aligned_cols=335 Identities=17% Similarity=0.160 Sum_probs=226.0
Q ss_pred CCCHHHHHhhhccCCCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcE
Q 012991 23 CISEAEIRDEFSHHQHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEI 101 (452)
Q Consensus 23 ~~~~~~ir~~~~~~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i 101 (452)
.......+++|....+.+++|+.+... ..++.+.+++.+.......++. ....++++.++++++++ ++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~--------~~~~~lr~~ia~~~~~~-~~~i 89 (361)
T PRK00950 19 GKSKEEIAREYGIDPESIIKLGSNENPLGPSPKAVEAIEKELSKIHRYPE--------PDAPELREALSKYTGVP-VENI 89 (361)
T ss_pred CCCHHHHHHHhCCCccceEEccCCCCCCCCCHHHHHHHHHHHHhhcCCCC--------CCHHHHHHHHHHHhCCC-HHHE
Confidence 344666788887655689999766432 3445578888776544322221 12388999999999996 7899
Q ss_pred EE-ecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHH
Q 012991 102 SL-VDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKK 179 (452)
Q Consensus 102 ~~-t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~ 179 (452)
++ |+|+++++..++.++ .++|++|++++|.|...... ++..|++++.++. ++++.+ ++++++
T Consensus 90 ~~~~~Ga~~~i~~~~~~~--------~~~gd~vlv~~p~y~~~~~~----~~~~g~~~~~~~~----~~~~~~~~~~l~~ 153 (361)
T PRK00950 90 IVGGDGMDEVIDTLMRTF--------IDPGDEVIIPTPTFSYYEIS----AKAHGAKPVYAKR----EEDFSLDVDSVLN 153 (361)
T ss_pred EEeCCCHHHHHHHHHHHh--------cCCCCEEEEcCCChHHHHHH----HHHcCCEEEEeec----CCCCCcCHHHHHH
Confidence 99 678888888888765 47899999999988765433 4556999998853 333344 888988
Q ss_pred HHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCc-cc-c-ccccCccEEEEcCcccCc
Q 012991 180 GIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSI-KI-D-VKEIGADFYVSNLHKWFF 256 (452)
Q Consensus 180 ~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~-~~-~-~~~~~~d~~~~s~~K~l~ 256 (452)
.+ ..++++|++++++||||.++|.+++.++|+++|+ ++|+|++++.... .. . ....+..+++.|++|. +
T Consensus 154 ~~------~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~-~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~-~ 225 (361)
T PRK00950 154 AI------TEKTKVIFLCTPNNPTGNLIPEEDIRKILESTDA-LVFVDEAYVEFAEYDYTPLALEYDNLIIGRTFSKV-F 225 (361)
T ss_pred Hh------ccCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCc-EEEEECchhhhCccchHHHHHhcCCEEEEEeehHh-h
Confidence 88 4678999999999999999999999999999999 7999999864321 00 1 1111234677899995 7
Q ss_pred CCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 012991 257 CPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKM 334 (452)
Q Consensus 257 g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l 334 (452)
|.+| +|+++++++++.. +. ..... ...+ ..+...+...+... +-+++.+++.+++++++
T Consensus 226 g~~GlRiG~~~~~~~~~~~-~~-~~~~~-------------~~~~---~~~~~~a~~~l~~~-~~~~~~~~~~~~~r~~l 286 (361)
T PRK00950 226 GLAGLRIGYGFVPEWLIDY-YM-RAKTP-------------FSLT---RLSQAAAIAALSDK-EYIEKSIEHGIKSREYL 286 (361)
T ss_pred cCchhhcchhcCCHHHHHH-HH-HhcCC-------------CCCC---HHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHH
Confidence 7676 7888888776654 11 11000 0111 12223333333321 12444555555555555
Q ss_pred HHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccc
Q 012991 335 ARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITG 414 (452)
Q Consensus 335 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (452)
.+.|. +.+. ++. ++++|+.++ ..+..++.+.|.+ +||.++++..+.. ..++
T Consensus 287 ~~~l~----~~~~-~~~--~~~i~~~~~-------~~~~~~~~~~l~~-~gv~v~~~~~f~~--------------~~~~ 337 (361)
T PRK00950 287 YNELP----FKVY-PSE--ANFVLVDVT-------PMTAKEFCEELLK-RGVIVRDCTSFRG--------------LGDY 337 (361)
T ss_pred HhhcC----eeEC-CCc--ceEEEEECC-------CCCHHHHHHHHHH-CCEEEeeCCccCC--------------CCCC
Confidence 55543 3332 333 678888774 3467889999976 5999976544321 2357
Q ss_pred eEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 415 YARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 415 ~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
++|+|++ +.+++++++++|+++++
T Consensus 338 ~lRis~~---~~~~~~~l~~~L~~il~ 361 (361)
T PRK00950 338 YIRVSIG---TFEENERFLEILKEIVE 361 (361)
T ss_pred eEEEECC---CHHHHHHHHHHHHHHhC
Confidence 9999998 78899999999998763
No 69
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.96 E-value=2.9e-27 Score=233.98 Aligned_cols=336 Identities=15% Similarity=0.149 Sum_probs=233.2
Q ss_pred CCeEEeccCCCCC-CcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh----C--CCCCCcEEEecChhHH
Q 012991 38 HGVARINNGSFGS-CPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI----N--ADDVGEISLVDNATTA 110 (452)
Q Consensus 38 ~~~~~l~~~~~~~-~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~--~~~~~~i~~t~g~t~a 110 (452)
++++.|+.+.+.. .|..+.+++.+.+.. .. ..|....+..++|+++++++ | ++ +++|++|+|++++
T Consensus 33 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~----~~--~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-~~~i~~t~G~~~a 105 (391)
T PRK08361 33 ENVISLGIGEPDFDTPKNIKEAAKRALDE----GW--THYTPNAGIPELREAIAEYYKKFYGVDVD-VDNVIVTAGAYEA 105 (391)
T ss_pred cCeEEcCCCCCCCCCCHHHHHHHHHHHhc----CC--CCCCCCCCcHHHHHHHHHHHHHHhCCCCC-cccEEEeCChHHH
Confidence 5688998887663 467778887776532 11 12333455677888888876 3 43 6899999999999
Q ss_pred HHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCC
Q 012991 111 AAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGK 189 (452)
Q Consensus 111 ~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~ 189 (452)
+.+++.++ +++|++|++++|+|.+.... +...|.+++.++++. +....+ ++++++.+ .+
T Consensus 106 l~~~~~~l--------~~~g~~Vlv~~p~y~~~~~~----~~~~g~~~~~v~~~~--~~~~~~d~~~l~~~i------~~ 165 (391)
T PRK08361 106 TYLAFESL--------LEEGDEVIIPDPAFVCYVED----AKIAEAKPIRIPLRE--ENEFQPDPDELLELI------TK 165 (391)
T ss_pred HHHHHHHh--------cCCCCEEEEcCCCCcccHHH----HHHcCCEEEEEecCC--ccCCCCCHHHHHHhc------cc
Confidence 99999876 58899999999999886544 355699999986521 112234 89999888 46
Q ss_pred ceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCc----cccccc--cCccEEEEcCcccCcCCCC
Q 012991 190 MIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSI----KIDVKE--IGADFYVSNLHKWFFCPPS 260 (452)
Q Consensus 190 ~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~----~~~~~~--~~~d~~~~s~~K~l~g~~G 260 (452)
++++|++++|+||||..+| +++|+++|+++++ ++|+|++++.... ...... ...++++.|++|. +|++|
T Consensus 166 ~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~-~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~-~~~~G 243 (391)
T PRK08361 166 RTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNI-YILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKT-FAMTG 243 (391)
T ss_pred ccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCe-EEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchh-cCCcH
Confidence 7899999999999999999 7788999999999 7999999764321 111111 1356888999995 77778
Q ss_pred --cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhh--cCHHHHHHHHHHHHHHHHH
Q 012991 261 --VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFE--GGIDGIMQRNHEQALKMAR 336 (452)
Q Consensus 261 --~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~--~g~~~~~~~~~~~~~~l~~ 336 (452)
+|+++++++++.. +. ... ....+..+...+ .++...+.... +.++.++++++++++.+.+
T Consensus 244 lRiG~~~~~~~~~~~-~~-~~~-----------~~~~~~~~~~~q---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (391)
T PRK08361 244 WRLGFVIAPEQVIKD-MI-KLH-----------AYIIGNVASFVQ---IAGIEALRSKESWKAVEEMRKEYNERRKLVLK 307 (391)
T ss_pred hhhhhhccCHHHHHH-HH-HHH-----------hhhccCCChHHH---HHHHHHhcCCcccHHHHHHHHHHHHHHHHHHH
Confidence 8999998777664 11 110 000011222222 22333333210 1256777888888888999
Q ss_pred HHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceE
Q 012991 337 MLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYA 416 (452)
Q Consensus 337 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i 416 (452)
.|.+++++.+..+++ +.++|+.++. .+.+..++.+.|.+++||.+.++..+.. ..++++
T Consensus 308 ~L~~~~~~~~~~p~g--~~~~~~~l~~-----~~~~~~~l~~~l~~~~gv~v~pg~~f~~--------------~~~~~i 366 (391)
T PRK08361 308 RLKEMPHIKVFEPKG--AFYVFANIDE-----TGMSSEDFAEWLLEKARVVVIPGTAFGK--------------AGEGYI 366 (391)
T ss_pred HHHhCCCCeecCCCE--EEEEEEECCC-----CCCCHHHHHHHHHHhCCEEEcCchhhCC--------------CCCCEE
Confidence 998876777666554 6678888862 1346778888886657999987665421 235799
Q ss_pred EecccccCCHHHHHHHHHHHHHHHh
Q 012991 417 RISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 417 Ris~~~~~t~~di~~l~~~l~~~~~ 441 (452)
|++++. +.++++..++.|++.++
T Consensus 367 Ri~~~~--~~~~l~~al~~l~~~l~ 389 (391)
T PRK08361 367 RISYAT--SKEKLIEAMERMEKALE 389 (391)
T ss_pred EEEecC--CHHHHHHHHHHHHHHHh
Confidence 999985 67789999999988774
No 70
>PRK07682 hypothetical protein; Validated
Probab=99.96 E-value=3.7e-27 Score=232.34 Aligned_cols=337 Identities=17% Similarity=0.166 Sum_probs=230.0
Q ss_pred CCeEEeccCCCCC-CcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhC----CC-CC-CcEEEecChhHH
Q 012991 38 HGVARINNGSFGS-CPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLIN----AD-DV-GEISLVDNATTA 110 (452)
Q Consensus 38 ~~~~~l~~~~~~~-~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~----~~-~~-~~i~~t~g~t~a 110 (452)
++++.|+.+.+.. .+..+.+++.+.+.. . ...|....+..++|++++++++ .+ ++ ++|++|+|+++|
T Consensus 20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~----~--~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~a 93 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASIRSLEQ----G--YTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQA 93 (378)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhc----C--CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHH
Confidence 4688998877663 455577777665432 1 1123334456777777777764 32 23 479999999999
Q ss_pred HHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCC
Q 012991 111 AAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGK 189 (452)
Q Consensus 111 ~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~ 189 (452)
+.+++.++ +++||+|++++|+|+.....+ +..|.++..+++. .+++..+ ++++++++ .+
T Consensus 94 l~~~~~~l--------~~~gd~vl~~~p~y~~~~~~~----~~~g~~~~~~~~~--~~~~~~~d~~~l~~~~------~~ 153 (378)
T PRK07682 94 LDVAMRAI--------INPGDEVLIVEPSFVSYAPLV----TLAGGVPVPVATT--LENEFKVQPAQIEAAI------TA 153 (378)
T ss_pred HHHHHHHh--------CCCCCEEEEeCCCchhhHHHH----HHcCCEEEEeecC--CccCCCCCHHHHHhhc------Cc
Confidence 99999876 589999999999998754443 4468888888652 1222334 89999888 46
Q ss_pred ceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCcc-----c-cccc-cCccEEEEcCcccCcCCC
Q 012991 190 MIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSIK-----I-DVKE-IGADFYVSNLHKWFFCPP 259 (452)
Q Consensus 190 ~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~~-----~-~~~~-~~~d~~~~s~~K~l~g~~ 259 (452)
++++|++++|+||||.+++ +++|+++|++|++ ++|+|++++..... + .+.. ....+++.|++|. +|.+
T Consensus 154 ~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~-~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~~ 231 (378)
T PRK07682 154 KTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDL-IVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKG-FAMT 231 (378)
T ss_pred ccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCc-EEEEehhhhhcccCCCCCChhhcccccCCEEEEecCccc-ccCh
Confidence 7899999999999999987 6688999999999 79999997643321 0 1111 1345788899996 6666
Q ss_pred C--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Q 012991 260 S--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARM 337 (452)
Q Consensus 260 G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~ 337 (452)
| +|++++++++++. + .... .. ...+.+...+ .++..++.......+.++++++++++.+.+.
T Consensus 232 GlR~G~~~~~~~~i~~-l-~~~~----------~~-~~~~~~~~~q---~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 295 (378)
T PRK07682 232 GWRLGFIAAPVYFSEA-M-LKIH----------QY-SMMCAPTMAQ---FAALEALRAGNDDVIRMRDSYRKRRNFFVTS 295 (378)
T ss_pred hhhhhhhhcCHHHHHH-H-HHHH----------Hh-hccCCCHHHH---HHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 7 8999998887775 2 1110 00 0011222222 3334444321012566778888999999999
Q ss_pred HHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEE
Q 012991 338 LANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYAR 417 (452)
Q Consensus 338 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iR 417 (452)
|.++ ++.+..|++ +.++|..++. .+.+..++.+.|.+++||.+.++..+.. ..++++|
T Consensus 296 L~~~-~~~~~~p~g--~~~~~~~~~~-----~~~~~~~~~~~ll~~~gv~v~pg~~f~~--------------~~~~~iR 353 (378)
T PRK07682 296 FNEI-GLTCHVPGG--AFYAFPSISS-----TGLSSEEFAEQLLLEEKVAVVPGSVFGE--------------SGEGFIR 353 (378)
T ss_pred HHHC-CCccCCCCe--eEEEEEeccC-----CCCCHHHHHHHHHHhCCEEEcCchhhCc--------------CCCCeEE
Confidence 9887 776655544 5677776631 1346678888876556999987665421 2357999
Q ss_pred ecccccCCHHHHHHHHHHHHHHHhc
Q 012991 418 ISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 418 is~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
||++. +.+++++.+++|+++++.
T Consensus 354 is~~~--~~~~l~~~l~~l~~~l~~ 376 (378)
T PRK07682 354 CSYAT--SLEQLQEAMKRMKRFVEN 376 (378)
T ss_pred EEeCC--CHHHHHHHHHHHHHHHhh
Confidence 99985 688999999999998754
No 71
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.96 E-value=1.3e-26 Score=230.27 Aligned_cols=343 Identities=13% Similarity=0.110 Sum_probs=234.8
Q ss_pred CCCCeEEeccCC-CCC-CcHHHHHHHHHHHHHHhc-CCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHH
Q 012991 36 HQHGVARINNGS-FGS-CPKSVLADQQKWQLKFLQ-QPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAA 112 (452)
Q Consensus 36 ~~~~~~~l~~~~-~~~-~p~~v~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~ 112 (452)
.++.+++|..+. ++. .++.+.+++.+.+..... .+......+..++.+++++.++++++.+ +++++|+| ++++.
T Consensus 40 ~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~--~~i~~tsG-~~a~~ 116 (397)
T PRK06939 40 DGKEVINFCANNYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGTE--DAILYSSC-FDANG 116 (397)
T ss_pred CCCeEEEeeccCccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCCC--cEEEEcCh-HHHHH
Confidence 577889998765 453 577799998888765321 1111112344677889999999999985 67777776 77888
Q ss_pred HHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceE
Q 012991 113 IVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIR 192 (452)
Q Consensus 113 ~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~ 192 (452)
.++.++ +++||+|+++++.|+++...+.. .|.++..++ ..+ .+++++.++.......+++
T Consensus 117 ~~~~~l--------~~~gd~vi~~~~~~~~~~~~~~~----~~~~~~~~~----~~d----~~~l~~~i~~~~~~~~~~~ 176 (397)
T PRK06939 117 GLFETL--------LGKEDAIISDALNHASIIDGVRL----CKAKRYRYA----NND----MADLEAQLKEAKEAGARHK 176 (397)
T ss_pred HHHHHh--------CCCCCEEEEEhhhhHHHHHHHHh----cCCceEEeC----CCC----HHHHHHHHHhhhccCCCCe
Confidence 887765 58999999999999998766543 477777663 222 4666666643111123788
Q ss_pred EEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccc------cccc--cCccEEEEcCcccCcCCCCcEEE
Q 012991 193 LAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKI------DVKE--IGADFYVSNLHKWFFCPPSVAFL 264 (452)
Q Consensus 193 lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~------~~~~--~~~d~~~~s~~K~l~g~~G~G~l 264 (452)
+|+..+..|++|...++++|.++|++||+ ++|+|++|+.|.... .... .++|++++|+||++.|++| |++
T Consensus 177 ~v~~~~v~~~~G~~~~~~~l~~la~~~~~-~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r~-G~v 254 (397)
T PRK06939 177 LIATDGVFSMDGDIAPLPEICDLADKYDA-LVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGASG-GYT 254 (397)
T ss_pred EEEEecCcCCCCCcCCHHHHHHHHHHhCC-EEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccCc-eEE
Confidence 99988899999999999999999999999 799999997654321 1111 1468999999999767764 999
Q ss_pred EEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCC
Q 012991 265 YCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGT 344 (452)
Q Consensus 265 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~ 344 (452)
++++++++. +. .... ...+.++++...+.++.++++++.. .+.++++++++++++.+.|.+. ++
T Consensus 255 ~~~~~~~~~-l~-~~~~---------~~~~~~~~~~~~~~a~~~al~~~~~----~~~~~~~~~~~~~~l~~~L~~~-~~ 318 (397)
T PRK06939 255 AGRKEVIDW-LR-QRSR---------PYLFSNSLAPAIVAASIKVLELLEE----SDELRDRLWENARYFREGMTAA-GF 318 (397)
T ss_pred EeCHHHHHH-HH-HhCc---------cccccCCCCHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 888877765 21 1100 0001122222233444455666542 2567888899999999999876 66
Q ss_pred CcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccC
Q 012991 345 SLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYN 424 (452)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~ 424 (452)
++..+. +.++.+.++ ...+..++++.|.++ ||.+.....+.. ....+++|++++.++
T Consensus 319 ~~~~~~---~~~~~~~~~------~~~~~~~~~~~L~~~-gI~v~~~~~~~~-------------~~~~~~iRi~~~~~~ 375 (397)
T PRK06939 319 TLGPGE---HPIIPVMLG------DAKLAQEFADRLLEE-GVYVIGFSFPVV-------------PKGQARIRTQMSAAH 375 (397)
T ss_pred CcCCCC---CCEEEEEEC------CHHHHHHHHHHHHHC-CceEeeeCCCCC-------------CCCCceEEEEECCCC
Confidence 654432 345544443 234677899999876 999864322111 122468999999889
Q ss_pred CHHHHHHHHHHHHHHHhc
Q 012991 425 TLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 425 t~~di~~l~~~l~~~~~~ 442 (452)
+++|+++++++|+++++.
T Consensus 376 ~~~~i~~~l~~L~~~~~~ 393 (397)
T PRK06939 376 TKEQLDRAIDAFEKVGKE 393 (397)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999999999999998864
No 72
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=5.1e-27 Score=229.78 Aligned_cols=330 Identities=13% Similarity=0.078 Sum_probs=232.2
Q ss_pred CCCHHHHHhhhccCCCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcE
Q 012991 23 CISEAEIRDEFSHHQHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEI 101 (452)
Q Consensus 23 ~~~~~~ir~~~~~~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i 101 (452)
......++++|.. ..++.|+.+... ..|+.+.+++.+.+.... +.+..+..+++++++++++++ +++|
T Consensus 16 ~~~~~~~~~~~~~--~~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~--------~~p~~g~~~lr~~ia~~~~~~-~~~i 84 (359)
T PRK03158 16 GKSIEEVKREYGL--EKIVKLASNENPYGPSPKVKEAIAAHLDELA--------LYPDGYAPELRTKVAKHLGVD-EEQL 84 (359)
T ss_pred CCCHHHHHHhcCC--CceEEecCCCCCCCCCHHHHHHHHHHHHHhh--------cCCCCcHHHHHHHHHHHhCCC-HHHE
Confidence 3456667777764 377888665443 246668998887665432 122345788999999999996 7899
Q ss_pred EEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHH
Q 012991 102 SLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKG 180 (452)
Q Consensus 102 ~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~ 180 (452)
++|+|+++++..++.++ +++||+|++++|+|+..... +...|.++..+++. + +.+ ++.+++.
T Consensus 85 ~~t~G~~~~l~~~~~~~--------~~~gd~v~~~~p~y~~~~~~----~~~~g~~~~~~~~~----~-~~~d~~~l~~~ 147 (359)
T PRK03158 85 LFGAGLDEVIQMISRAL--------LNPGTNTVMAEPTFSQYRHN----AIIEGAEVREVPLK----D-GGHDLEAMLKA 147 (359)
T ss_pred EECCCHHHHHHHHHHHH--------hCCCCEEEEcCCCHHHHHHH----HHHcCCeEEEEecC----C-CCcCHHHHHHh
Confidence 99999999999998876 47899999999999876444 35569999999652 2 233 7888887
Q ss_pred HhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHH--cCCCEEEEecccccCCc----cc--c-ccccCccEEEEcC
Q 012991 181 IEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRD--EGVDQVFVDAAHAMGSI----KI--D-VKEIGADFYVSNL 251 (452)
Q Consensus 181 i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~--~~~~~~ivD~a~~~g~~----~~--~-~~~~~~d~~~~s~ 251 (452)
+ .+++++|++++|+||||.++|.++|.++++. +|+ ++|+|+++..... +. . ....+..+++.|+
T Consensus 148 ~------~~~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~-~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~ 220 (359)
T PRK03158 148 I------DEQTKIVWICNPNNPTGTYVNHEELLSFLESVPSHV-LVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTF 220 (359)
T ss_pred c------CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCc-EEEEECchHhhcCCcccccHHHHHHhcCCEEEEEec
Confidence 7 5688999999999999999999999999887 589 7999999854321 11 1 1122346788899
Q ss_pred cccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHH
Q 012991 252 HKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHE 329 (452)
Q Consensus 252 ~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~ 329 (452)
+|. +|++| +|++++++++++. + ..... . ...+...+.++..+++.. . -.+.+++..++
T Consensus 221 SK~-~g~~GlRiG~~v~~~~~~~~-~-~~~~~-----------~--~~~~~~~q~~~~~~l~~~-~---~~~~~~~~~~~ 280 (359)
T PRK03158 221 SKA-YGLAALRVGYGIASEELIEK-L-NIARP-----------P--FNTTRIAQYAAIAALEDQ-A---FLKECVEKNAE 280 (359)
T ss_pred hHh-hcCcchhhehhcCCHHHHHH-H-HHhcC-----------C--CCCCHHHHHHHHHHhcCH-H---HHHHHHHHHHH
Confidence 995 77677 5999988877765 2 11100 0 112223333333333211 1 24555666777
Q ss_pred HHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCC
Q 012991 330 QALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKD 409 (452)
Q Consensus 330 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~ 409 (452)
.++.+.+.|.+. ++.+.. +. +.++|+.++ .+..++.+.|.+ +||.+.++..+
T Consensus 281 ~~~~~~~~l~~~-~~~~~~-~~--g~~i~~~~~--------~~~~~~~~~l~~-~gv~v~~g~~f--------------- 332 (359)
T PRK03158 281 GLEQYYAFCKEY-GLFYYP-SQ--TNFIFVDTG--------RDANELFEALLK-KGYIVRSGAAL--------------- 332 (359)
T ss_pred HHHHHHHHHHHC-CCeeCC-Cc--CcEEEEECC--------CCHHHHHHHHHH-CCeEEeeCCCC---------------
Confidence 788888888776 665543 33 567887763 246788898876 59999876544
Q ss_pred CCccceEEecccccCCHHHHHHHHHHHHHH
Q 012991 410 GIITGYARISHQVYNTLEDYEKFRDAVILL 439 (452)
Q Consensus 410 ~~~~~~iRis~~~~~t~~di~~l~~~l~~~ 439 (452)
..++++||+++ +.+|+++++++|+++
T Consensus 333 -~~~~~iRi~~~---~~~~~~~l~~al~~~ 358 (359)
T PRK03158 333 -GFPTGVRITIG---LKEQNDKIIELLKEL 358 (359)
T ss_pred -CCCCeEEEecC---CHHHHHHHHHHHHHh
Confidence 12479999988 899999999999875
No 73
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.96 E-value=1.4e-26 Score=233.22 Aligned_cols=372 Identities=16% Similarity=0.163 Sum_probs=236.3
Q ss_pred CCHHHHHhhhccC---CC--CeEEeccCC-CCCCcHHHHHHHHHHHHHHhcCCch--hhhhhhhHHHHHHHHHHHhHhCC
Q 012991 24 ISEAEIRDEFSHH---QH--GVARINNGS-FGSCPKSVLADQQKWQLKFLQQPDD--FYFNSLRKGILESRAAVKDLINA 95 (452)
Q Consensus 24 ~~~~~ir~~~~~~---~~--~~~~l~~~~-~~~~p~~v~e~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~la~~~~~ 95 (452)
++..++.+++..+ .. ..-++..|. ....|+.+.+++.+.......+|-. ....+..+...++++.+++++|.
T Consensus 49 ~se~~~~~~~~~l~~~n~~~~~~~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~ 128 (481)
T PRK04366 49 VSELEVVRHYTRLSQKNYGVDTGFYPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGM 128 (481)
T ss_pred CCHHHHHHHHHHHHhcCCCCCcceecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCC
Confidence 6766666665431 11 123556553 3367777888887652222222221 12345667889999999999999
Q ss_pred CCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCC----EEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChH
Q 012991 96 DDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRND----TVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEE 171 (452)
Q Consensus 96 ~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~----~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~ 171 (452)
+ .. .++.++|+.+....+..+ +.+ ..++|+ +|++++++|+++...+ ...|++++.+++ +.++
T Consensus 129 ~-~~-~l~~~~GA~a~~~~l~~~-r~~---~~~~Gd~~~~~Vlv~~~~hp~~~~~~----~~~G~~vv~v~~----~~~~ 194 (481)
T PRK04366 129 D-AV-TLQPAAGAHGELTGLLMI-RAY---HEARGDTKRTEVIVPDSAHGTNPASA----AMAGFKVVEIPS----NEDG 194 (481)
T ss_pred C-ce-EEEeCcHHHHHHHHHHHH-HHH---hhccCcCCCCEEEEcCCccHhHHHHH----HHcCCEEEEeec----CCCC
Confidence 6 23 333334433333222111 100 134454 9999999999987654 456999999954 3334
Q ss_pred HH-HHHHHHHHhccccCCCceEEEEEeccCCCCccc-ccHHHHHHHHHHcCCCEEEEecccccCCc-cccccccCccEEE
Q 012991 172 EI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVV-IPVRKLVKICRDEGVDQVFVDAAHAMGSI-KIDVKEIGADFYV 248 (452)
Q Consensus 172 ~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~-~~l~~i~~l~~~~~~~~~ivD~a~~~g~~-~~~~~~~~~d~~~ 248 (452)
.+ +++|++.+ ++++++|++++++ ++|.+ .|+++|+++|+++|+ +++||++++.+.. ..+...+++|+++
T Consensus 195 ~~D~e~L~~~i------~~~t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~ga-l~iVD~a~~~~~~g~~~~~~~GaD~~~ 266 (481)
T PRK04366 195 LVDLEALKAAV------GEDTAALMLTNPN-TLGLFERNILEIAEIVHEAGG-LLYYDGANLNAILGKARPGDMGFDVVH 266 (481)
T ss_pred CcCHHHHHhhc------ccCCeEEEEeCCC-CccccchHHHHHHHHHHHcCC-EEEEEecChhhhcccCCccccCCCEEE
Confidence 45 89999988 5789999999987 89987 589999999999999 7999999986633 2456678999999
Q ss_pred EcCcccCcCC-----CCcEEEEEecCccccCCCCCceeccCCCCcc--------cccccccccCccccccHHHHHHHHHH
Q 012991 249 SNLHKWFFCP-----PSVAFLYCRKSILSSDMHHPVVSHEFGNGLP--------IESAWIGTRDYSAQLVIPSAVTFVSR 315 (452)
Q Consensus 249 ~s~~K~l~g~-----~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~al~~~~~ 315 (452)
+++|||+++| +|+|++++++++... + .+......+.... ..+...++.+. ..+..+..++..
T Consensus 267 ~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~-l-p~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~---l~~~~a~~~l~~ 341 (481)
T PRK04366 267 LNLHKTFSTPHGGGGPGSGPVGVKEELAPF-L-PVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNF---GVLVRAYAYIRS 341 (481)
T ss_pred EechhhcCCCCCCCCCCeeeeeehhhhHhh-C-CCCeeeccCCceeecccccccCCCcccccCch---HHHHHHHHHHHH
Confidence 9999998755 446799999887775 3 2221100111110 01112222222 333445555554
Q ss_pred h-hcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccC
Q 012991 316 F-EGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQA 394 (452)
Q Consensus 316 ~-~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~ 394 (452)
+ .+|++++.++...+++++++.|.++..+. .+. .....+.|..+.- .. .+.+..++.+.|.+ .||.++....+
T Consensus 342 ~G~~Gl~~~a~~~~~~a~~l~~~L~~~~~~~--~~~-~~~~~~~~~~~~~-~~-~g~~~~~v~~~L~~-~Gi~~~~~~~p 415 (481)
T PRK04366 342 LGAEGLREVSEDAVLNANYLKARLKDIYDLP--YDR-PCMHEFVLSGKKL-KE-TGVRTLDIAKRLLD-YGFHPPTIYFP 415 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhCccc--CCC-CeeEEEEEECccc-cc-cCCCHHHHHHHHHH-CCccCCccccc
Confidence 4 12566767778889999999999873332 221 1122233433200 00 13467889999976 49987633222
Q ss_pred CCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhcc
Q 012991 395 PKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEEG 443 (452)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~~ 443 (452)
....+.+|+|++.++|.+|||+++++|+++.++.
T Consensus 416 ---------------~~~~~~l~is~~e~~t~edid~l~~~l~~i~~~~ 449 (481)
T PRK04366 416 ---------------LIVPEALMIEPTETESKETLDAFIAAMKQIAEEA 449 (481)
T ss_pred ---------------cccCCeEEEcccCCCCHHHHHHHHHHHHHHHHHH
Confidence 1224689999999999999999999999997653
No 74
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.96 E-value=1.3e-26 Score=231.00 Aligned_cols=350 Identities=14% Similarity=0.106 Sum_probs=235.6
Q ss_pred CCCeEEeccCCCC-----CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCC-----CCCcEEEecC
Q 012991 37 QHGVARINNGSFG-----SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINAD-----DVGEISLVDN 106 (452)
Q Consensus 37 ~~~~~~l~~~~~~-----~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-----~~~~i~~t~g 106 (452)
++.+++|+.|.+. +.|+.+.+++.+.+... ....|....+..++|++++++++.. ++++|++|+|
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~-----~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G 125 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSG-----KYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAG 125 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcC-----cCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCC
Confidence 5689999998763 55677888888766431 1112334456788899999988531 3689999999
Q ss_pred hhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccc
Q 012991 107 ATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGK 185 (452)
Q Consensus 107 ~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~ 185 (452)
+++|+.+++.++ .++||+|++++|.|+..... +...|.+++.+++. .++...+ ++.+++.+
T Consensus 126 ~~~al~l~~~~l--------~~~Gd~Vlv~~P~y~~y~~~----~~~~g~~~~~~~~~--~~~~~~~d~~~l~~~~---- 187 (430)
T PLN00145 126 CAQAIEIIMSVL--------AQPGANILLPRPGYPLYEAR----AVFSGLEVRHFDLL--PERGWEVDLEGVEALA---- 187 (430)
T ss_pred HHHHHHHHHHHh--------cCCCCEEEEcCCCCccHHHH----HHHcCCEEEEeeCC--cccCCcCCHHHHHHHh----
Confidence 999999999987 48999999999999875443 34468999988652 1223344 88999888
Q ss_pred cCCCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCc---c-cc---ccccCccEEEEcCcccC
Q 012991 186 KDGKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSI---K-ID---VKEIGADFYVSNLHKWF 255 (452)
Q Consensus 186 ~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~---~-~~---~~~~~~d~~~~s~~K~l 255 (452)
.++++++++++|+||||.++| +++|+++|+++|+ ++|+|++++.... + .. +......+++.|++|.
T Consensus 188 --~~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i-~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~- 263 (430)
T PLN00145 188 --DENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGI-LVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKR- 263 (430)
T ss_pred --CcCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCC-EEEEeccchhhccCCCCccchhhhcccCcEEEEeccccc-
Confidence 578999999999999999998 6678888999999 7999999764221 1 11 1112245788899995
Q ss_pred cCCCC--cEEEEEe-c-CccccC-CCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHH
Q 012991 256 FCPPS--VAFLYCR-K-SILSSD-MHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQ 330 (452)
Q Consensus 256 ~g~~G--~G~l~~~-~-~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~ 330 (452)
++.+| +|++++. + .++... +....... .. ....++...+.++..+++.-. ..-++..++.+++.
T Consensus 264 ~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~~~~~Q~a~~~~l~~~~--~~~~~~~~~~~~~~ 332 (430)
T PLN00145 264 WVVPGWRLGWIATCDPNGILKETKVVDSIRNY--------LN-ISTDPATFVQGAIPQIIANTK--EEFFTKTLGLLKET 332 (430)
T ss_pred cCCCCeeEEEEEEecchhhhhhhHHHHHHHHH--------hc-ccCCCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHH
Confidence 77788 8888873 2 332210 00000000 00 001122333333333433201 11366777788888
Q ss_pred HHHHHHHHHHHcCCCcC-CCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCC
Q 012991 331 ALKMARMLANAWGTSLG-SPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKD 409 (452)
Q Consensus 331 ~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~ 409 (452)
++.+.+.|.+++++... .|.+ ++++|+.++.... .+..+..+++..|.++.||.+.++..+
T Consensus 333 ~~~~~~~L~~~~g~~~~~~P~g--a~y~~v~l~~~~~-~~~~~~~~~~~~ll~~~gV~v~pG~~f--------------- 394 (430)
T PLN00145 333 ADICYEKIKEIKCITCPHKPEG--SMFVMVKLDLSCL-SGIKDDMDFCCKLAKEESVVVLPGSAL--------------- 394 (430)
T ss_pred HHHHHHHHhcCCCCCCCcCCCe--eeEEEeccChhhc-CCCCCHHHHHHHHHHhCCEEEeCcccc---------------
Confidence 99999999887777644 3444 7888888752100 001145567766666669999776654
Q ss_pred CCccceEEecccccCCHHHHHHHHHHHHHHHhcccc
Q 012991 410 GIITGYARISHQVYNTLEDYEKFRDAVILLVEEGQV 445 (452)
Q Consensus 410 ~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~~~~ 445 (452)
..++++||++.. +.++++..++.|++++.+..+
T Consensus 395 -g~~~~lRis~~~--~~~~l~~al~rl~~~~~~~~~ 427 (430)
T PLN00145 395 -GMKNWLRITFAI--DPPSLEDGLERLKSFCLRHAK 427 (430)
T ss_pred -CCCCeEEEEeCC--CHHHHHHHHHHHHHHHHHhcc
Confidence 235799999984 788899999999999877544
No 75
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.96 E-value=2e-26 Score=229.35 Aligned_cols=340 Identities=12% Similarity=0.136 Sum_probs=224.5
Q ss_pred CeEEe-ccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhh-hhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHH
Q 012991 39 GVARI-NNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYF-NSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVL 115 (452)
Q Consensus 39 ~~~~l-~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~ 115 (452)
.++.+ ++...+ ..++.+.+++.+.+..+....+.... +...+...++++++++++|.+ +.+++++ |++|+..++
T Consensus 47 ~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~~--~~i~~~s-G~~a~~~~i 123 (410)
T PRK13392 47 RVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGKE--SALLFTS-GYVSNDAAL 123 (410)
T ss_pred eEEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCCC--CEEEECc-HHHHHHHHH
Confidence 34444 433334 34667999998887765322222111 223345779999999999974 5555555 567888888
Q ss_pred HHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEE
Q 012991 116 QQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAI 195 (452)
Q Consensus 116 ~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~ 195 (452)
.++++ ..+|+.|+++...|.+...++ ...|.++..++ .++ .+.+++.+++.. ++++++|+
T Consensus 124 ~~l~~------~~~g~~vi~~~~~h~s~~~~~----~~~g~~~~~~~----~~d----~~~l~~~l~~~~--~~~t~~v~ 183 (410)
T PRK13392 124 STLGK------LLPGCVILSDALNHASMIEGI----RRSGAEKQVFR----HND----LADLEEQLASVD--PDRPKLIA 183 (410)
T ss_pred HHHhc------CCCCCEEEEehhhhHHHHHHH----HHcCCeEEEEe----CCC----HHHHHHHHHhcc--CCCCEEEE
Confidence 76642 347888888888898876544 44688887763 232 233344443211 35789999
Q ss_pred EeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccc---cc---c--ccCccEEEEcCcccCcCCCCcEEEEEe
Q 012991 196 IDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKI---DV---K--EIGADFYVSNLHKWFFCPPSVAFLYCR 267 (452)
Q Consensus 196 ~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~---~~---~--~~~~d~~~~s~~K~l~g~~G~G~l~~~ 267 (452)
+++++||+|.+.|+++|.++|+++|+ ++++|++|+.|.... .+ . ...+|+++.|++|+ +|..| |+++.+
T Consensus 184 i~~~~n~tG~~~~l~~i~~l~~~~~~-~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~-~g~~G-G~~~~~ 260 (410)
T PRK13392 184 FESVYSMDGDIAPIEAICDLADRYNA-LTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKA-FGCLG-GYIAAS 260 (410)
T ss_pred EeCCCCCCcccccHHHHHHHHHHcCC-EEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHh-hhccc-chhhcC
Confidence 99999999999999999999999999 799999998665321 10 0 11468899999997 55566 788777
Q ss_pred cCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcC
Q 012991 268 KSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLG 347 (452)
Q Consensus 268 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 347 (452)
+++++. +. .+... + .+....+...+.++.++++.+... ...+++++++++++.+.|.++ |+++.
T Consensus 261 ~~~~~~-l~-~~~~~-~--------~~s~~~~~~~~~a~~aaL~~~~~~----~~~~~~~~~~~~~l~~~L~~~-g~~~~ 324 (410)
T PRK13392 261 ADLIDF-VR-SFAPG-F--------IFTTALPPAVAAGATAAIRHLKTS----QTERDAHQDRVAALKAKLNAN-GIPVM 324 (410)
T ss_pred HHHHHH-HH-HhCcc-h--------hccCcCCHHHHHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHc-CCCCC
Confidence 776663 11 11000 0 011222223455666677766542 344577888899999999886 77765
Q ss_pred CCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHH
Q 012991 348 SPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLE 427 (452)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~ 427 (452)
.+. ++++.+.++ +..+..++.+.|.+++||.++....+.. .....++|++++.++|.+
T Consensus 325 ~~~---~~~~~i~~~------~~~~~~~~~~~L~~~~GI~v~~~~~p~~-------------~~~~~~lRis~~~~~t~e 382 (410)
T PRK13392 325 PSP---SHIVPVMVG------DPTLCKAISDRLMSEHGIYIQPINYPTV-------------PRGTERLRITPTPLHDDE 382 (410)
T ss_pred CCC---CCEEEEEeC------CHHHHHHHHHHHHHhCCEEEeeeCCCCC-------------CCCCceEEEEECCCCCHH
Confidence 432 455555543 2335678888886546999975433211 123468999999999999
Q ss_pred HHHHHHHHHHHHHhc
Q 012991 428 DYEKFRDAVILLVEE 442 (452)
Q Consensus 428 di~~l~~~l~~~~~~ 442 (452)
|+++++++|+++.++
T Consensus 383 did~l~~aL~~~~~~ 397 (410)
T PRK13392 383 DIDALVAALVAIWDR 397 (410)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998753
No 76
>PLN00175 aminotransferase family protein; Provisional
Probab=99.96 E-value=8.9e-27 Score=231.31 Aligned_cols=339 Identities=13% Similarity=0.115 Sum_probs=233.1
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh----CCC-CCC-cEEEecChhH
Q 012991 37 QHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI----NAD-DVG-EISLVDNATT 109 (452)
Q Consensus 37 ~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~-~~~-~i~~t~g~t~ 109 (452)
+.+++.|+.|.++ +.|+.+.+++.+.+.. .. ..|....+..++|+++++++ +.+ +++ +|++|+|+++
T Consensus 53 ~~~~i~l~~G~P~~~~~~~~~~~~~~~~~~----~~--~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~ 126 (413)
T PLN00175 53 KHGAINLGQGFPNFDGPDFVKEAAIQAIRD----GK--NQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTE 126 (413)
T ss_pred cCCeEecCCCCCCCCCCHHHHHHHHHHHhc----CC--CCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHH
Confidence 4679999998887 4467788888777643 11 12334445666777777766 432 245 7999999999
Q ss_pred HHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCC
Q 012991 110 AAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDG 188 (452)
Q Consensus 110 a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~ 188 (452)
|+.+++.++ +++||+|++++|.|......+ +..|.+++.+++.. + +..+ ++.|++.+ .
T Consensus 127 al~~~~~~l--------~~~gd~Vlv~~P~y~~~~~~~----~~~g~~~~~v~~~~--~-~~~~~~~~l~~~~------~ 185 (413)
T PLN00175 127 AIAATILGL--------INPGDEVILFAPFYDSYEATL----SMAGAKIKTVTLRP--P-DFAVPEDELKAAF------T 185 (413)
T ss_pred HHHHHHHHh--------CCCCCEEEEeCCCchhHHHHH----HHcCCEEEEEECCc--c-cCCCCHHHHHHhc------C
Confidence 999999876 589999999999998765554 44699999997631 1 1334 78899988 5
Q ss_pred CceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCcc---c---cccc-cCccEEEEcCcccCcCC
Q 012991 189 KMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSIK---I---DVKE-IGADFYVSNLHKWFFCP 258 (452)
Q Consensus 189 ~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~~---~---~~~~-~~~d~~~~s~~K~l~g~ 258 (452)
+++++|++++++||||.+++ +++|+++|++|++ ++|+|+++...... . .+.. .+..+++.|++|. ++.
T Consensus 186 ~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~-~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~-~~~ 263 (413)
T PLN00175 186 SKTRAILINTPHNPTGKMFTREELELIASLCKENDV-LAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKT-FSL 263 (413)
T ss_pred cCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCc-EEEEecccCccccCCcccChhhCCCCcCcEEEEecchhh-ccC
Confidence 67899999999999999987 5578889999999 79999998643221 1 1111 1345788899996 666
Q ss_pred CC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 012991 259 PS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMAR 336 (452)
Q Consensus 259 ~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~ 336 (452)
+| +|+++++++++.. + .... .....+.+...+.++..+++.... -++..+++++++++.+.+
T Consensus 264 ~G~RiG~~v~~~~l~~~-l-~~~~-----------~~~~~~~s~~~Q~a~~~~l~~~~~---~~~~~~~~~~~~~~~l~~ 327 (413)
T PLN00175 264 TGWKIGWAIAPPHLTWG-V-RQAH-----------SFLTFATATPMQWAAVAALRAPES---YYEELKRDYSAKKDILVE 327 (413)
T ss_pred cchheeeeEeCHHHHHH-H-HHHH-----------hhccCCCCHHHHHHHHHHHhCCHH---HHHHHHHHHHHHHHHHHH
Confidence 66 8999988877764 1 1110 000012233333333334332111 256778888899999999
Q ss_pred HHHHHcCCCcCCCcccccceEEEEcCCccccCChh-hHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccce
Q 012991 337 MLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGED-DALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGY 415 (452)
Q Consensus 337 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (452)
.|.+. ++.+..|.+ ++++|+.++. .+. +..++++.|.+++||.+.++..+...+ ....++
T Consensus 328 ~L~~~-g~~~~~p~g--~~f~~~~~~~-----~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~-----------~~~~~~ 388 (413)
T PLN00175 328 GLKEV-GFKVYPSSG--TYFVMVDHTP-----FGFENDIAFCEYLIEEVGVAAIPPSVFYLNP-----------EDGKNL 388 (413)
T ss_pred HHHHC-CCeecCCCe--eEEEEEeccc-----cCCCCHHHHHHHHHHhCCEEEeCchHhCCCC-----------CCCCCE
Confidence 99886 777665544 6678887631 122 457888888766799987665442110 123469
Q ss_pred EEecccccCCHHHHHHHHHHHHHHHh
Q 012991 416 ARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 416 iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
+||+++. ++++++..+++|++.++
T Consensus 389 iRls~~~--~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 389 VRFAFCK--DEETLRAAVERMKTKLK 412 (413)
T ss_pred EEEEEcC--CHHHHHHHHHHHHHHHh
Confidence 9999984 78999999999998875
No 77
>PLN02822 serine palmitoyltransferase
Probab=99.96 E-value=3.5e-26 Score=229.98 Aligned_cols=353 Identities=11% Similarity=0.114 Sum_probs=238.2
Q ss_pred CCCCeEEeccCCC-C-CCcHHHHHHHHHHHHHHhcCCc-hhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHH
Q 012991 36 HQHGVARINNGSF-G-SCPKSVLADQQKWQLKFLQQPD-DFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAA 112 (452)
Q Consensus 36 ~~~~~~~l~~~~~-~-~~p~~v~e~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~ 112 (452)
.++.+++|..+.+ + ..++.+.+++.+.+..+..... ....+...+...+++++|+++++.+ +.+++++|++ ++.
T Consensus 107 ~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~~--~~i~~s~G~~-a~~ 183 (481)
T PLN02822 107 NGKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGTP--DSILYSYGLS-TIF 183 (481)
T ss_pred CCceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCCC--CEEEECCHHH-HHH
Confidence 4566788875543 3 4577799999998877533211 1123566788999999999999985 7888888776 667
Q ss_pred HHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccC---CC
Q 012991 113 IVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKD---GK 189 (452)
Q Consensus 113 ~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~---~~ 189 (452)
.++.++ .++||.|+++...|.+...++. ..+.+++.+ +.++.. .++..+++.... .+
T Consensus 184 sai~a~--------~~~gd~Ii~d~~~H~s~~~~~~----ls~~~~~~~----~~nd~~----~l~~~l~~~~~~~~~~~ 243 (481)
T PLN02822 184 SVIPAF--------CKKGDIIVADEGVHWGIQNGLY----LSRSTIVYF----KHNDME----SLRNTLEKLTAENKRKK 243 (481)
T ss_pred HHHHHh--------CCCCCEEEEeCCccHHHHHHHH----HcCCeEEEE----CCCCHH----HHHHHHHHHhhhhcccC
Confidence 777766 5889999999888887755543 347888888 444432 222222211100 13
Q ss_pred ce-EEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCcc---------ccccccCccEEEEcCcccCcCCC
Q 012991 190 MI-RLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIK---------IDVKEIGADFYVSNLHKWFFCPP 259 (452)
Q Consensus 190 ~~-~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~---------~~~~~~~~d~~~~s~~K~l~g~~ 259 (452)
++ ++|+++.+++++|.+.|+++|+++|++||+ ++|+|++|++|... +++....+|+++.|++|. +|+.
T Consensus 244 ~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~-~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKa-lg~~ 321 (481)
T PLN02822 244 KLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRF-RVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHA-LATE 321 (481)
T ss_pred CCcEEEEEecCCCCCCCccCHHHHHHHHHHcCC-EEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhh-hhhC
Confidence 44 799999999999999999999999999999 89999999976542 122222579999999997 6777
Q ss_pred CcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHH
Q 012991 260 SVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLA 339 (452)
Q Consensus 260 G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~ 339 (452)
| |++++++++++. +. .. . ....+.++.+.....+..++++.+.. .+.++++++++++++++.|.
T Consensus 322 G-G~i~g~~~ii~~-~~-~~-~--------~~~~fsa~lPp~~~~Aa~~aL~~l~~----~~~~~~~l~~~~~~l~~~L~ 385 (481)
T PLN02822 322 G-GFCTGSARVVDH-QR-LS-S--------SGYVFSASLPPYLASAAITAIDVLED----NPSVLAKLKENIALLHKGLS 385 (481)
T ss_pred C-eEEEcCHHHHHH-HH-hc-C--------CceeeccccCHHHHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHHH
Confidence 7 898888887765 11 00 0 00111122222223333346655542 25678889999999999999
Q ss_pred HHcCCCcCCCcccccceEEEEcCCcccc--CChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEE
Q 012991 340 NAWGTSLGSPPEICAAMVMVGLPSRLRV--MGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYAR 417 (452)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iR 417 (452)
++.|+.+..+.. ++++++.+++..+. .+.....++++.|.++.||.+.....+.... ...+..+|
T Consensus 386 ~~~g~~~~~~~~--spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~-----------~~~~~~lR 452 (481)
T PLN02822 386 DIPGLSIGSNTL--SPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDK-----------CRLPVGIR 452 (481)
T ss_pred hcCCcccCCCCC--CCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCC-----------CCCCCcEE
Confidence 877777655444 77888877531010 0111246788888745699996542221100 11245799
Q ss_pred ecccccCCHHHHHHHHHHHHHHHhc
Q 012991 418 ISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 418 is~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
++++..+|++||++++++|++++..
T Consensus 453 i~is~~~t~edI~~~~~~l~~~~~~ 477 (481)
T PLN02822 453 LFVSAGHTESDILKASESLKRVAAS 477 (481)
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHH
Confidence 9999888999999999999998754
No 78
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.96 E-value=1.1e-26 Score=231.15 Aligned_cols=343 Identities=13% Similarity=0.124 Sum_probs=231.5
Q ss_pred CCCCeEEeccCCCC-----CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhC------------CCCC
Q 012991 36 HQHGVARINNGSFG-----SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLIN------------ADDV 98 (452)
Q Consensus 36 ~~~~~~~l~~~~~~-----~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------------~~~~ 98 (452)
.+++++.|+.|.+. .+|+.+.+++.+.+.. . ....|....+..++|++++++++ ++ +
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~----~-~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~-~ 104 (412)
T PTZ00433 31 SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDS----Q-ECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIK-K 104 (412)
T ss_pred CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhc----C-CCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCC-h
Confidence 67889999998876 3577788888776542 1 11223334457788888888875 43 6
Q ss_pred CcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHH
Q 012991 99 GEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEF 177 (452)
Q Consensus 99 ~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l 177 (452)
++|++|+|+++++.+++.++ +++||+|+++.|+|...... +...|++++.+++. .++.+.+ ++++
T Consensus 105 ~~i~it~G~~~al~~~~~~~--------~~~gd~vlv~~P~y~~~~~~----~~~~g~~~~~i~~~--~~~~~~~d~~~l 170 (412)
T PTZ00433 105 DNVVLCSGVSHAILMALTAL--------CDEGDNILVPAPGFPHYETV----CKAYGIEMRFYNCR--PEKDWEADLDEI 170 (412)
T ss_pred hhEEEeCChHHHHHHHHHHh--------cCCCCEEEEccCCcccHHHH----HHHcCCEEEEEecC--ccccCcCCHHHH
Confidence 89999999999999999976 58999999999999886544 45569999999652 1222334 8889
Q ss_pred HHHHhccccCCCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCc---c-c---cccccCccEE
Q 012991 178 KKGIEKGKKDGKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSI---K-I---DVKEIGADFY 247 (452)
Q Consensus 178 ~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~---~-~---~~~~~~~d~~ 247 (452)
++.+ .+++++|++++++||||.+++ +++|+++|+++|+ ++|+|+++..... . . .+......++
T Consensus 171 ~~~~------~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~-~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~ 243 (412)
T PTZ00433 171 RRLV------DDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRL-PLISDEIYAGMVFNGATFTSVADFDTTVPRVI 243 (412)
T ss_pred HHHh------ccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCC-eEEEeccccccccCCCCccchhhccCCCceEE
Confidence 8888 467899999999999999987 5567888999999 7999999863221 1 1 1111112467
Q ss_pred EEcCcccCcCCCC--cEEEEEe-c-----CccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHH-HHHhhc
Q 012991 248 VSNLHKWFFCPPS--VAFLYCR-K-----SILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTF-VSRFEG 318 (452)
Q Consensus 248 ~~s~~K~l~g~~G--~G~l~~~-~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~~~ 318 (452)
+.|++|. +|.+| +|++++. + +++.. + ... ... ....+...+.++..++.. ...
T Consensus 244 ~~SfSK~-~~~pGlRlG~~i~~~p~~~~~~~~~~-~-~~~-----------~~~-~~~~~~~~q~a~~~~l~~~~~~--- 305 (412)
T PTZ00433 244 LGGTAKN-LVVPGWRLGWLLLVDPHGNGGDFLDG-M-KRL-----------GML-VCGPCSVVQAALGEALLNTPQE--- 305 (412)
T ss_pred Eccchhh-cCCCCeeEEEEEEeCCcccHHHHHHH-H-HHH-----------hhc-cCCCChHHHHHHHHHHhcCcHH---
Confidence 7899995 66666 8888862 2 22222 1 000 000 011222222222223221 111
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCC
Q 012991 319 GIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDD 398 (452)
Q Consensus 319 g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~ 398 (452)
-++.+++++++.++.+.+.|.+..++.+..|++ ++++|+.++.... .+..+..++.+.|.+++||.+..+..+
T Consensus 306 ~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~g--g~f~~~~l~~~~~-~~~~~~~~~~~~ll~~~gV~v~pg~~f---- 378 (412)
T PTZ00433 306 HLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRG--SMFLMSRLDLEKF-RDIKSDVEFYEKLLEEENVQVLPGEIF---- 378 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCe--eEEEEEEechhhc-CCCCCHHHHHHHHHHhcCEEEeCcccc----
Confidence 356677778888888989888765666555554 7788888862100 001245688888875569999766554
Q ss_pred CCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhccc
Q 012991 399 GQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEEGQ 444 (452)
Q Consensus 399 ~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~~~ 444 (452)
..++++|++++. ..+++++.++.|+++++...
T Consensus 379 ------------~~~~~iRis~~~--~~e~l~~al~~l~~~~~~~~ 410 (412)
T PTZ00433 379 ------------HMPGFTRLTISR--PVEVLREAVERIKAFCERHK 410 (412)
T ss_pred ------------CCCCeEEEEecC--CHHHHHHHHHHHHHHHHHhc
Confidence 125799999985 57889999999999887543
No 79
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.96 E-value=7.7e-27 Score=231.10 Aligned_cols=335 Identities=14% Similarity=0.120 Sum_probs=223.0
Q ss_pred CCCCeEEeccCCCCC-CcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh----CCC-CCC-cEEEecChh
Q 012991 36 HQHGVARINNGSFGS-CPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI----NAD-DVG-EISLVDNAT 108 (452)
Q Consensus 36 ~~~~~~~l~~~~~~~-~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~-~~~-~i~~t~g~t 108 (452)
.+.+++.|+.+.+.. .|..+.+++...+.. + ....|....+..++|+++++++ +.+ +++ .+++|+|++
T Consensus 33 ~g~~~i~l~~g~p~~~~p~~~~~~~~~~~~~----~-~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~ 107 (394)
T PRK05942 33 QGLDLIDLGMGNPDGAAPQPVIEAAIAALAD----P-QNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSK 107 (394)
T ss_pred cCCCeEEcCCCCCCCCCCHHHHHHHHHHHhC----C-CCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChH
Confidence 456789999877663 455567766554421 1 1123444455667888888876 432 255 588999999
Q ss_pred HHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccC
Q 012991 109 TAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKD 187 (452)
Q Consensus 109 ~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~ 187 (452)
+++..++.++ +++||+|++++|+|+.+...+. ..|.+++.++++ .+....+ ++++++.+
T Consensus 108 ~al~~~~~~~--------~~~gd~Vlv~~P~y~~~~~~~~----~~g~~~~~v~~~--~~~~~~~d~~~l~~~~------ 167 (394)
T PRK05942 108 EGLTHLALAY--------VNPGDVVLVPSPAYPAHFRGPL----IAGAQIYPIILK--PENDWLIDLSSIPEEV------ 167 (394)
T ss_pred HHHHHHHHHh--------CCCCCEEEEcCCCCcchHHHHH----HcCCEEEEeecC--CccCCccCHHHHHHhc------
Confidence 9999999876 5899999999999998755543 458999998652 1122234 88898888
Q ss_pred CCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCc----ccc---ccc-cCccEEEEcCcccCc
Q 012991 188 GKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSI----KID---VKE-IGADFYVSNLHKWFF 256 (452)
Q Consensus 188 ~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~----~~~---~~~-~~~d~~~~s~~K~l~ 256 (452)
.+++++|++++|+||||.+++ +++|.++|+++|+ ++|+|++++.... ... +.. .+..+++.|++|. +
T Consensus 168 ~~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~-~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~-~ 245 (394)
T PRK05942 168 AQQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEI-MLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKT-Y 245 (394)
T ss_pred cccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCe-EEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhc-c
Confidence 568999999999999999998 6678889999999 7999999753221 111 111 1234677899995 6
Q ss_pred CCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 012991 257 CPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKM 334 (452)
Q Consensus 257 g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l 334 (452)
|.+| +|+++.++++++. + ..... ....+.+...+.++..+++...+ ..+.++++++++++.+
T Consensus 246 ~~~GlRiG~i~~~~~l~~~-l-~~~~~-----------~~~~~~~~~~q~~~~~~l~~~~~---~~~~~~~~~~~~~~~~ 309 (394)
T PRK05942 246 NMAGWRVGFVVGNRHIIQG-L-RTLKT-----------NLDYGIFSALQKAAETALQLPDS---YLQQVQERYRTRRDFL 309 (394)
T ss_pred CChhhheeeeecCHHHHHH-H-HHHHh-----------hcccCCCHHHHHHHHHHHhCcHH---HHHHHHHHHHHHHHHH
Confidence 6666 8999988877765 2 11100 00012222334444445543333 4677788888889999
Q ss_pred HHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccc
Q 012991 335 ARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITG 414 (452)
Q Consensus 335 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (452)
.+.|.+. ++.+..+.. +.++|+.++ ...+..++...+.+++||.+.++..+.. ..++
T Consensus 310 ~~~L~~~-~~~~~~~~~--~~f~~~~~~------~~~~~~~~~~~~l~~~gV~v~~g~~f~~--------------~~~~ 366 (394)
T PRK05942 310 IQGLGEL-GWNIPPTKA--TMYLWVPCP------VGMGSTDFALNVLQKTGVVVTPGNAFGE--------------GGEG 366 (394)
T ss_pred HHHHHHC-CCeecCCCe--eeEEEEECC------CCCCHHHHHHHHHHHCCEEEeCChhhCc--------------CCCC
Confidence 9999876 666655433 568889886 2445667776655557999976654421 2357
Q ss_pred eEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 415 YARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 415 ~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
++|+++.. +. +++.++|+++.+
T Consensus 367 ~iRis~~~--~~---~~l~~~l~~l~~ 388 (394)
T PRK05942 367 YVRISLIA--DC---DRLGEALDRLKQ 388 (394)
T ss_pred eEEEEecC--CH---HHHHHHHHHHHH
Confidence 99999962 33 455555555443
No 80
>PRK09105 putative aminotransferase; Provisional
Probab=99.96 E-value=8.8e-27 Score=228.14 Aligned_cols=317 Identities=12% Similarity=0.092 Sum_probs=221.5
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHH
Q 012991 38 HGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQ 116 (452)
Q Consensus 38 ~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~ 116 (452)
++.++|+.+..+ +.|+.+.+++.+...... .|++ . ...++|+.+++++|++ +++|++|+|+++++.+++.
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~-----~Y~~--~-~~~~Lr~aia~~~~v~-~e~I~it~Gs~~ai~~~~~ 113 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARSAALSG-----RYDL--E-LEDDLRTLFAAQEGLP-ADHVMAYAGSSEPLNYAVL 113 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHHHHHhc-----CCCC--c-hHHHHHHHHHHHhCcC-hhhEEEcCChHHHHHHHHH
Confidence 467899888765 567779999887654321 1221 2 2778999999999996 8999999999999999999
Q ss_pred HhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEE
Q 012991 117 QIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAI 195 (452)
Q Consensus 117 ~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~ 195 (452)
++ +++||+|++++|+|..+... ++..|.+++.++. +.++.+ ++.+++.. +++++|+
T Consensus 114 ~l--------~~~gd~Vli~~P~y~~~~~~----~~~~g~~~~~v~~----~~~~~~d~~~l~~~~-------~~~~~v~ 170 (370)
T PRK09105 114 AF--------TSPTAGLVTADPTYEAGWRA----ADAQGAPVAKVPL----RADGAHDVKAMLAAD-------PNAGLIY 170 (370)
T ss_pred HH--------cCCCCEEEEeCCChHHHHHH----HHHcCCeEEEecC----CCCCCCCHHHHHhcC-------CCCCEEE
Confidence 77 57899999999999887554 4556999999854 222333 66666542 4688999
Q ss_pred EeccCCCCcccccHHHHHHHHHH--cCCCEEEEecccccCC-cc--ccccccCcc-EEEEcCcccCcCCCC--cEEEEEe
Q 012991 196 IDHITSMPCVVIPVRKLVKICRD--EGVDQVFVDAAHAMGS-IK--IDVKEIGAD-FYVSNLHKWFFCPPS--VAFLYCR 267 (452)
Q Consensus 196 ~~~~~n~tG~~~~l~~i~~l~~~--~~~~~~ivD~a~~~g~-~~--~~~~~~~~d-~~~~s~~K~l~g~~G--~G~l~~~ 267 (452)
+++|+||||.+++.++|.++++. +++ ++|+|+++.... .+ .++.....+ +++.|++|+ +|++| +|+++.+
T Consensus 171 l~nP~NPTG~~~~~~~l~~l~~~~~~~~-~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~-~g~~GlRiG~~v~~ 248 (370)
T PRK09105 171 ICNPNNPTGTVTPRADIEWLLANKPAGS-VLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKL-YGMAGMRLGLAAAR 248 (370)
T ss_pred EeCCCCCCCcCcCHHHHHHHHHhCCCCc-EEEEECchHHhccCcchHHHHhhCCCEEEEecccHh-hcCCccceeeeecC
Confidence 99999999999999988887754 489 799999984211 11 122112234 566799995 88888 8999988
Q ss_pred cCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcC
Q 012991 268 KSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLG 347 (452)
Q Consensus 268 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 347 (452)
+++++. + ... . ....+...+.+..+++.. .. -.+..+++++++++.+.+.|.+. ++.+.
T Consensus 249 ~~~i~~-l-~~~-~-------------~~~~~~~~~~aa~~~L~~-~~---~~~~~~~~~~~~r~~l~~~L~~~-g~~~~ 307 (370)
T PRK09105 249 PDLLAK-L-ARF-G-------------HNPLPVPAAAAGLASLRD-PK---LVPQRRAENAAVREDTIAWLKKK-GYKCT 307 (370)
T ss_pred HHHHHH-H-Hhc-C-------------CCCcCHHHHHHHHHHHhC-HH---HHHHHHHHHHHHHHHHHHHHHHC-CCCcC
Confidence 877765 2 111 0 012222222222233322 11 35666778888899999999886 77665
Q ss_pred CCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHH
Q 012991 348 SPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLE 427 (452)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~ 427 (452)
.+. ++++++.++ .+..++.+.|.++ ||.+...+ . ..++++|++++ +++
T Consensus 308 ~~~---~~f~~~~~~--------~~~~~l~~~L~~~-gI~v~~~~-~----------------~~~~~~Ris~~---~~~ 355 (370)
T PRK09105 308 PSQ---ANCFMVDVK--------RPAKAVADAMAKQ-GVFIGRSW-P----------------IWPNWVRVTVG---SEE 355 (370)
T ss_pred CCC---CcEEEEeCC--------CCHHHHHHHHHHC-CcEEecCC-C----------------CCCCeEEEEcC---CHH
Confidence 433 456566553 2557899999775 99984322 1 22579999998 789
Q ss_pred HHHHHHHHHHHHHh
Q 012991 428 DYEKFRDAVILLVE 441 (452)
Q Consensus 428 di~~l~~~l~~~~~ 441 (452)
++++++++|+++++
T Consensus 356 ~~~~l~~al~~~~~ 369 (370)
T PRK09105 356 EMAAFRSAFAKVMR 369 (370)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998863
No 81
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.96 E-value=1.5e-26 Score=229.31 Aligned_cols=341 Identities=16% Similarity=0.151 Sum_probs=232.3
Q ss_pred CCCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh------CCCCCCcEEEecChh
Q 012991 36 HQHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI------NADDVGEISLVDNAT 108 (452)
Q Consensus 36 ~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~~i~~t~g~t 108 (452)
.+..++.|..+.+. +.++.+.+++.+.+.. ... .|....+...+|+.+++++ +++ ++++++|+|++
T Consensus 29 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~--~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~~~~g~~ 101 (393)
T PRK05764 29 QGRDVISLGAGEPDFDTPEHIKEAAIEALDD----GKT--KYTPAAGIPELREAIAAKLKRDNGLDYD-PSQVIVTTGAK 101 (393)
T ss_pred ccCCEEEeCCCCCCCCCCHHHHHHHHHHHhc----CCC--CcCCCCChHHHHHHHHHHHHHHhCCCCC-HHHEEEeCCcH
Confidence 45678899888776 3456777887776542 111 2333445678888888887 343 68999999999
Q ss_pred HHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccC
Q 012991 109 TAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKD 187 (452)
Q Consensus 109 ~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~ 187 (452)
+|+..++.++ +++|++|++++|.|......+ +..|.+++.+++. .+....+ ++.+++.+
T Consensus 102 ~a~~~~~~~~--------~~~gd~vl~~~p~y~~~~~~~----~~~g~~~~~~~~~--~~~~~~~d~~~l~~~l------ 161 (393)
T PRK05764 102 QALYNAFMAL--------LDPGDEVIIPAPYWVSYPEMV----KLAGGVPVFVPTG--EENGFKLTVEQLEAAI------ 161 (393)
T ss_pred HHHHHHHHHh--------cCCCCEEEecCCCCcchHHHH----HHcCCEEEEEecC--cccCCcCCHHHHHHhh------
Confidence 9999998876 578999999999998764443 5569999999652 1122233 78899888
Q ss_pred CCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCcc----cc-----ccccCccEEEEcCcccC
Q 012991 188 GKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSIK----ID-----VKEIGADFYVSNLHKWF 255 (452)
Q Consensus 188 ~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~~----~~-----~~~~~~d~~~~s~~K~l 255 (452)
.+++++|++++++||||.+++ +++|.++|++|++ ++++|++++..... .. ....+.++++.|++|.
T Consensus 162 ~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~-~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~- 239 (393)
T PRK05764 162 TPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDI-WVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKA- 239 (393)
T ss_pred CccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCc-EEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCccc-
Confidence 467899999999999999987 6688899999999 79999987643210 11 1122356888899996
Q ss_pred cCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Q 012991 256 FCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALK 333 (452)
Q Consensus 256 ~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~ 333 (452)
+|++| +|+++.++++++. + .... .......+...+.++..+++.... ..+.++++.+++++.
T Consensus 240 ~~~~G~RiG~i~~~~~~~~~-~-~~~~-----------~~~~~~~~~~~q~~~~~~l~~~~~---~~~~~~~~~~~~~~~ 303 (393)
T PRK05764 240 YAMTGWRLGYAAGPKELIKA-M-SKLQ-----------SHSTSNPTSIAQYAAVAALNGPQD---EVEEMRQAFEERRDL 303 (393)
T ss_pred ccCccceeEEEecCHHHHHH-H-HHHH-----------hhcccCCChHHHHHHHHHHcCChH---HHHHHHHHHHHHHHH
Confidence 67666 7898888777665 1 1110 000112222233333333321111 355677778888888
Q ss_pred HHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCcc
Q 012991 334 MARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIIT 413 (452)
Q Consensus 334 l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (452)
+.+.|.+.+++.+..+.. +.++|+.++.... ..+.++.++.+.|.+++||.+.++..+ ..+
T Consensus 304 l~~~L~~~~g~~~~~~~g--~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~gi~v~~g~~f----------------~~~ 364 (393)
T PRK05764 304 MVDGLNEIPGLECPKPEG--AFYVFPNVSKLLG-KSITDSLEFAEALLEEAGVAVVPGIAF----------------GAP 364 (393)
T ss_pred HHHHHhhCCCCcccCCCc--ceEEEEecccccc-cccCCHHHHHHHHHHhCCEEEcccccc----------------CCC
Confidence 999998876777665543 5677777762100 001134778887766679999765544 125
Q ss_pred ceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 414 GYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 414 ~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
+++|+|++. +.++++.++++|++++++
T Consensus 365 ~~vRis~~~--~~~~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 365 GYVRLSYAT--SLEDLEEGLERIERFLES 391 (393)
T ss_pred CEEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 799999985 799999999999988753
No 82
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.96 E-value=4e-26 Score=225.78 Aligned_cols=336 Identities=14% Similarity=0.118 Sum_probs=229.6
Q ss_pred CCCCeEEeccCC-CCC-CcHHHHHHHHHHHHHHhc-CCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHH
Q 012991 36 HQHGVARINNGS-FGS-CPKSVLADQQKWQLKFLQ-QPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAA 112 (452)
Q Consensus 36 ~~~~~~~l~~~~-~~~-~p~~v~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~ 112 (452)
.++.++.|..+. .+. .++.+.+++.+.+..+.. .+............+++++.++++++.+ ..+++++|++++.
T Consensus 37 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~---~~i~~~~g~~~~~ 113 (385)
T PRK05958 37 DGRRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGAE---RALLFSSGYAANL 113 (385)
T ss_pred CCceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCC---cEEEECcHHHHHH
Confidence 467788787663 353 567799999988865421 1111122334567889999999999863 4455566777777
Q ss_pred HHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceE
Q 012991 113 IVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIR 192 (452)
Q Consensus 113 ~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~ 192 (452)
.++.++ +++||+|+++++.|+++..++. ..|.+++.++ ..+ .+.+++.++.. .+++.
T Consensus 114 ~~l~~~--------~~~gd~V~~~~~~~~~~~~~~~----~~g~~~~~~~----~~d----~~~l~~~i~~~---~~~~~ 170 (385)
T PRK05958 114 AVLTAL--------AGKGDLIVSDKLNHASLIDGAR----LSRARVRRYP----HND----VDALEALLAKW---RAGRA 170 (385)
T ss_pred HHHHHh--------CCCCCEEEEeCccCHHHHHHHH----hcCCceEEeC----CCC----HHHHHHHHHhc---cCCCe
Confidence 666654 5899999999999998776653 3588888874 222 57777777531 12467
Q ss_pred EEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccc---------cccccCccEEEEcCcccCcCCCCcEE
Q 012991 193 LAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKI---------DVKEIGADFYVSNLHKWFFCPPSVAF 263 (452)
Q Consensus 193 lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~---------~~~~~~~d~~~~s~~K~l~g~~G~G~ 263 (452)
+++++++.|++|...++++|.++|++||+ ++|+|++|+.|..+. ++.....++++.|++|+ +|+.| |+
T Consensus 171 lvi~~~~~~~~G~~~~l~~i~~ia~~~~~-~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~-~~~~G-g~ 247 (385)
T PRK05958 171 LIVTESVFSMDGDLAPLAELVALARRHGA-WLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKA-LGSSG-AA 247 (385)
T ss_pred EEEEEecccCCCCcCCHHHHHHHHHHhCC-EEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhh-cccCC-cE
Confidence 88888899999999999999999999999 799999997664321 12222334788999998 46777 78
Q ss_pred EEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcC
Q 012991 264 LYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWG 343 (452)
Q Consensus 264 l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~ 343 (452)
++.++++.+. +. .... .....+.++.....++.++++.+.. . +.+.+++.++++++.+.|.+. +
T Consensus 248 ~~~~~~~~~~-~~-~~~~---------~~~~~~~~~~~~~aa~~aal~~~~~---~-~~~~~~~~~~~~~l~~~L~~~-~ 311 (385)
T PRK05958 248 VLGSETLIDY-LI-NRAR---------PFIFTTALPPAQAAAARAALRILRR---E-PERRERLAALIARLRAGLRAL-G 311 (385)
T ss_pred EEcCHHHHHH-HH-HhCc---------cceecCCCCHHHHHHHHHHHHHHhc---C-HHHHHHHHHHHHHHHHHHHHc-C
Confidence 7777666543 11 0000 0000122233344445556666653 3 567888999999999999876 6
Q ss_pred CCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEeccccc
Q 012991 344 TSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVY 423 (452)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~ 423 (452)
+++..+. ++++++.++ +..+..++.+.|.+ .||.+..+..+.. ....+++|++++.+
T Consensus 312 ~~~~~~~---~~~~~~~~~------~~~~~~~~~~~l~~-~gI~v~~~~~~~~-------------~~~~~~lRis~~~~ 368 (385)
T PRK05958 312 FQLMDSQ---SAIQPLIVG------DNERALALAAALQE-QGFWVGAIRPPTV-------------PAGTSRLRITLTAA 368 (385)
T ss_pred CCcCCCC---CCEEEEEeC------CHHHHHHHHHHHHH-CCceEecccCCCC-------------CCCCceEEEEecCC
Confidence 6654432 567888775 23466789999976 4999965322211 11246899999999
Q ss_pred CCHHHHHHHHHHHHHH
Q 012991 424 NTLEDYEKFRDAVILL 439 (452)
Q Consensus 424 ~t~~di~~l~~~l~~~ 439 (452)
++++|++++++.|+++
T Consensus 369 ~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 369 HTEADIDRLLEALAEA 384 (385)
T ss_pred CCHHHHHHHHHHHHhc
Confidence 9999999999999875
No 83
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.96 E-value=7e-27 Score=231.08 Aligned_cols=339 Identities=14% Similarity=0.126 Sum_probs=225.5
Q ss_pred ccCCCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh----C--CCCCC-cEEEec
Q 012991 34 SHHQHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI----N--ADDVG-EISLVD 105 (452)
Q Consensus 34 ~~~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~--~~~~~-~i~~t~ 105 (452)
...++.++.|+.+.+. +.|+.+.+++.+.+.. + ..+.|....+..++|+++++++ | ++ ++ +|++|+
T Consensus 26 ~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~-~~~~I~it~ 99 (388)
T PRK07366 26 RAAGKELIDLSLGSSDLPAPAHALEAIAQSLHD----P-STHGYLLFHGTLDFREAAAQWYEQRFGLAVD-PETEVLPLI 99 (388)
T ss_pred HhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhC----c-ccCCCCCCCCCHHHHHHHHHHHHHhhCCcCC-CcCeEEECC
Confidence 3356788999887766 4467788888765431 1 1122333455677888888877 4 43 66 699999
Q ss_pred ChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhcc
Q 012991 106 NATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKG 184 (452)
Q Consensus 106 g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~ 184 (452)
|+++++.+++.++ +.+||+|++++|.|+.....+ +..|.+++.+++.. +....+ .+++++.+
T Consensus 100 Gs~~al~~~~~~l--------~~~gd~Vlv~~P~y~~~~~~~----~~~g~~~~~v~~~~--~~~~~~d~~~l~~~~--- 162 (388)
T PRK07366 100 GSQEGTAHLPLAV--------LNPGDFALLLDPGYPSHAGGV----YLAGGQIYPMPLRA--ENDFLPVFADIPTEV--- 162 (388)
T ss_pred CcHHHHHHHHHHh--------CCCCCEEEEcCCCCcchHHHH----HhcCCEEEEEECCC--ccCCCCCHHHHHHhh---
Confidence 9999999999976 589999999999998875554 44699999996521 111222 66776666
Q ss_pred ccCCCceEEEEEeccCCCCcccccHH---HHHHHHHHcCCCEEEEecccccCCc-----cc---ccccc-CccEEEEcCc
Q 012991 185 KKDGKMIRLAIIDHITSMPCVVIPVR---KLVKICRDEGVDQVFVDAAHAMGSI-----KI---DVKEI-GADFYVSNLH 252 (452)
Q Consensus 185 ~~~~~~~~lv~~~~~~n~tG~~~~l~---~i~~l~~~~~~~~~ivD~a~~~g~~-----~~---~~~~~-~~d~~~~s~~ 252 (452)
..++++|++++|+||||.+++.+ +|+++|++|++ ++|+|+++..-.. .. +.... ...+++.|++
T Consensus 163 ---~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~-~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfS 238 (388)
T PRK07366 163 ---LAQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDL-VLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLS 238 (388)
T ss_pred ---cccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCe-EEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecc
Confidence 45789999999999999999855 56778999999 7999998753221 11 11111 1236778999
Q ss_pred ccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHH
Q 012991 253 KWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQ 330 (452)
Q Consensus 253 K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~ 330 (452)
|. +|.+| +|+++.++++++. + ...... . ..++.+. .+.++.+++....+ -++.+++.+++.
T Consensus 239 K~-~g~~GlRiG~~v~~~~li~~-l-~~~~~~-~---------~~~~~~~-~~~~a~~~l~~~~~---~l~~~~~~~~~~ 301 (388)
T PRK07366 239 KS-YNMGGFRIGFAIGNAQLIQA-L-RQVKAV-V---------DFNQYRG-ILNGAIAALTGPQA---TVQQTVQIFRQR 301 (388)
T ss_pred cc-cCCcchhheehcCCHHHHHH-H-HHHHhh-c---------ccCCCHH-HHHHHHHHHhCcHH---HHHHHHHHHHHH
Confidence 96 66666 8999888877765 2 111000 0 0011111 11111222211112 366778888888
Q ss_pred HHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCC
Q 012991 331 ALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDG 410 (452)
Q Consensus 331 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~ 410 (452)
++.+.+.|.+. ++.+..|.+ ++++|+.++... ..+..++++.|.+++||.+.++..+..
T Consensus 302 r~~l~~~L~~~-~~~~~~p~~--g~f~~~~~~~~~----~~~~~~~~~~l~~~~gv~v~pg~~f~~-------------- 360 (388)
T PRK07366 302 RDAFINALHQI-GWPVPLPEA--TMYVWAKLPEPW----QGNSVEFCTQLVAQTGVAASPGSGFGK-------------- 360 (388)
T ss_pred HHHHHHHHHHC-CCcccCCCe--eEEEEEECCccc----CCCHHHHHHHHHHhCCEEEeCchHhCc--------------
Confidence 99999999876 665544544 789999987210 123567877775556999987655421
Q ss_pred CccceEEecccccCCHHHHHHHHHHHHHH
Q 012991 411 IITGYARISHQVYNTLEDYEKFRDAVILL 439 (452)
Q Consensus 411 ~~~~~iRis~~~~~t~~di~~l~~~l~~~ 439 (452)
...+++||+++. +.++++..+++|+++
T Consensus 361 ~~~~~iRi~~~~--~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 361 SGEGYVRFALVH--DPDILEEAVERIAAF 387 (388)
T ss_pred CCCCeEEEEecC--CHHHHHHHHHHHHHh
Confidence 234799999984 688899999988765
No 84
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=9.1e-27 Score=227.58 Aligned_cols=324 Identities=14% Similarity=0.154 Sum_probs=225.6
Q ss_pred HHHHHhhhccCCCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEe
Q 012991 26 EAEIRDEFSHHQHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLV 104 (452)
Q Consensus 26 ~~~ir~~~~~~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t 104 (452)
....++.+. .+.++.|+.+... ..|+.+.+++.+.+..... | +..+..++|+.++++++++ +++|++|
T Consensus 19 ~~~~~~~~~--~~~~i~l~~nen~~~~~~~v~~a~~~~~~~~~~-----Y---p~~g~~~Lr~aia~~~~~~-~~~I~vt 87 (366)
T PRK01533 19 PEQMKEVYG--DHSFVKLASNENPFGCSPRVLDELQKSWLDHAL-----Y---PDGGATTLRQTIANKLHVK-MEQVLCG 87 (366)
T ss_pred hHHHHHhcC--CCceEEeCCCCCCCCCCHHHHHHHHHHHHhcCc-----C---CCCCHHHHHHHHHHHhCCC-cceEEEC
Confidence 334444443 4678899887766 4667788888876543211 2 2334678999999999996 8999999
Q ss_pred cChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhc
Q 012991 105 DNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEK 183 (452)
Q Consensus 105 ~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~ 183 (452)
+|+++++.+++.++ +++||+|++++|.|+..... +...|.+++.+++ ++. .+ ++++++++
T Consensus 88 ~Gs~e~i~~~~~~l--------~~~gd~vlv~~P~y~~~~~~----~~~~g~~v~~v~~----~~~-~~d~~~l~~~~-- 148 (366)
T PRK01533 88 SGLDEVIQIISRAV--------LKAGDNIVTAGATFPQYRHH----AIIEGCEVKEVAL----NNG-VYDLDEISSVV-- 148 (366)
T ss_pred CCHHHHHHHHHHHh--------cCCCCEEEEcCCcHHHHHHH----HHHcCCEEEEeec----CCC-CcCHHHHHHHh--
Confidence 99999999999976 58999999999999876554 4556999999954 322 34 89999888
Q ss_pred cccCCCceEEEEEeccCCCCcccccHHHHHHHHHH--cCCCEEEEecccccCCc------ccc-ccccCccEEEEcCccc
Q 012991 184 GKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRD--EGVDQVFVDAAHAMGSI------KID-VKEIGADFYVSNLHKW 254 (452)
Q Consensus 184 ~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~--~~~~~~ivD~a~~~g~~------~~~-~~~~~~d~~~~s~~K~ 254 (452)
.+++++|++++|+||||.+++.+++.++++. .+. ++|+|+++..... .+. +...+-.+++.|++|.
T Consensus 149 ----~~~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~ 223 (366)
T PRK01533 149 ----DNDTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKA 223 (366)
T ss_pred ----CcCCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHH
Confidence 4678999999999999999998777666543 134 4778998752111 011 1112335788899995
Q ss_pred CcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q 012991 255 FFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQAL 332 (452)
Q Consensus 255 l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~ 332 (452)
+|.+| +|++++++++++. +. ... .....+...+.++.++++. .. -.+.+++..++.++
T Consensus 224 -~~l~GlRiG~~i~~~~~~~~-l~-~~~-------------~~~~~~~~~q~aa~~~l~~-~~---~~~~~~~~~~~~r~ 283 (366)
T PRK01533 224 -YGLASFRVGYAVGHEELIEK-LN-VVR-------------LPFNVSSLAQKAATIAFGD-DE---FIEEIVRVNTEGLR 283 (366)
T ss_pred -hcChHHHHhHHhCCHHHHHH-HH-Hhc-------------CCCCcCHHHHHHHHHHhCC-HH---HHHHHHHHHHHHHH
Confidence 77777 7998888777765 21 110 0022333333333334322 11 24455666677777
Q ss_pred HHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCc
Q 012991 333 KMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGII 412 (452)
Q Consensus 333 ~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~ 412 (452)
++.+.++.+ ++++..+. ++|+|+.++ ++.++.+.|.+ +||.|+. +
T Consensus 284 ~~~~~l~~~-g~~~~~~~---~nf~~~~~~---------~~~~~~~~l~~-~GI~Vr~---~------------------ 328 (366)
T PRK01533 284 QYESFCKEN-EIPFYQSQ---TNFIFLPVE---------NGGEIYEACAH-AGFIIRP---F------------------ 328 (366)
T ss_pred HHHHHHHhC-CCccCCCc---CcEEEEeCC---------CHHHHHHHHHH-CCcEEcc---C------------------
Confidence 777777766 67665443 678998875 34578888876 5999974 1
Q ss_pred cceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 413 TGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 413 ~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
++++||+++ +.+++++++++|+++++.
T Consensus 329 ~~~iRis~~---~~~~~~~l~~al~~~~~~ 355 (366)
T PRK01533 329 PNGVRITVG---TREQNEGVISVLQQHFEN 355 (366)
T ss_pred CCceEEeCC---CHHHHHHHHHHHHHHHHh
Confidence 258999998 899999999999998854
No 85
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.96 E-value=2.9e-27 Score=241.40 Aligned_cols=346 Identities=17% Similarity=0.131 Sum_probs=226.1
Q ss_pred CCCCeEEeccCCCC----CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh------CCCCCCcEEEec
Q 012991 36 HQHGVARINNGSFG----SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI------NADDVGEISLVD 105 (452)
Q Consensus 36 ~~~~~~~l~~~~~~----~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~~i~~t~ 105 (452)
.+++++.|+.|.+. +.|+.+.+++.+.+... ..|....+..++|++|++++ +++ +++|++|+
T Consensus 144 ~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~-------~~Y~~~~G~~~lReaia~~~~~~~~~~~~-~~~I~it~ 215 (517)
T PRK13355 144 AGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTDT-------EGYSDSKGLFSARKAIMQYAQLKGLPNVD-VDDIYTGN 215 (517)
T ss_pred cCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhcC-------CCCCCCcChHHHHHHHHHHHHhcCCCCCC-hhHEEEeC
Confidence 46789999997773 45777888887765321 12444566889999999998 564 78999999
Q ss_pred ChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhcc
Q 012991 106 NATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKG 184 (452)
Q Consensus 106 g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~ 184 (452)
|+++++.+++.++ +++||+|++++|.|+.....+ ...|.+++.+++. .+.+..+ ++++++.+
T Consensus 216 G~~eal~~~~~~l--------~~~Gd~Vli~~P~y~~y~~~~----~~~g~~~v~~~~~--~~~~~~~d~~~l~~~~--- 278 (517)
T PRK13355 216 GVSELINLSMSAL--------LDDGDEVLIPSPDYPLWTACV----NLAGGTAVHYRCD--EQSEWYPDIDDIRSKI--- 278 (517)
T ss_pred cHHHHHHHHHHHh--------CCCCCEEEEcCCCCcCHHHHH----HHCCCEEEEeecC--cccCCCCCHHHHHHhc---
Confidence 9999999999977 589999999999998865544 4569999888652 1222334 89999988
Q ss_pred ccCCCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCC----ccccccccCcc---EEEEcCccc
Q 012991 185 KKDGKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGS----IKIDVKEIGAD---FYVSNLHKW 254 (452)
Q Consensus 185 ~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~----~~~~~~~~~~d---~~~~s~~K~ 254 (452)
++++++|++++|+||||.+++ +++|+++|++|++ ++|+|+++..-. ....+.....+ +++.|++|.
T Consensus 279 ---~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~-~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~ 354 (517)
T PRK13355 279 ---TSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQL-IIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKS 354 (517)
T ss_pred ---CcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCc-EEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhh
Confidence 678999999999999999998 6788999999999 799999976321 11111111122 334799995
Q ss_pred CcCCCC--cEEEEEe--cCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHH
Q 012991 255 FFCPPS--VAFLYCR--KSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQ 330 (452)
Q Consensus 255 l~g~~G--~G~l~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~ 330 (452)
++.+| +|++++. ++++.. +...... ... .....+...+.++..++........-+... ++..+.
T Consensus 355 -~~~~G~RiG~~i~~~~~~~~~~-~~~~l~~--------~~~-~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~-~~~~~~ 422 (517)
T PRK13355 355 -HMIAGYRIGWMILSGNKRIAKD-YIEGLNM--------LAN-MRLCSNVPAQSIVQTALGGHQSVKDYLVPG-GRVYEQ 422 (517)
T ss_pred -ccCcccceEEEEeeCchhhHHH-HHHHHHH--------Hhc-CcCCcChHHHHHHHHHhcCCccHHHHHHHH-HHHHHH
Confidence 67777 7998854 332211 0000000 000 001223333344444442100000011222 234456
Q ss_pred HHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCC
Q 012991 331 ALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDG 410 (452)
Q Consensus 331 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~ 410 (452)
++++.+.|.+++++.+..|.+ ++++|+.++.... ...+..+++..+.++.||.+.++..+..
T Consensus 423 r~~l~~~L~~~~g~~~~~p~g--~fy~~~~l~~~~~--~~~~~~~~~~~ll~~~gV~v~pg~~F~~-------------- 484 (517)
T PRK13355 423 RELVYNALNAIPGISAVKPKA--AFYIFPKIDVKKF--NIHDDEQFALDLLHDKKVLIVQGTGFNW-------------- 484 (517)
T ss_pred HHHHHHHHhcCCCcccCCCCe--eeEEEeecCcccC--CCCCHHHHHHHHHHhCCEEEeCcchhCC--------------
Confidence 788888898877887766654 6667767752100 0112334544443456999987665521
Q ss_pred CccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 411 IITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 411 ~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
..++++|+++. .+.++++..++.|+++++.
T Consensus 485 ~~~~~~Ris~~--~~~~~l~~a~~rl~~~~~~ 514 (517)
T PRK13355 485 DKPDHFRVVYL--PRLEDLEDAMDRLADFFSY 514 (517)
T ss_pred CCcCEEEEEeC--CCHHHHHHHHHHHHHHHHH
Confidence 24679999996 4889999999999998864
No 86
>PRK09148 aminotransferase; Validated
Probab=99.96 E-value=7e-27 Score=231.89 Aligned_cols=350 Identities=13% Similarity=0.138 Sum_probs=230.4
Q ss_pred HHhhhccCCCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh----CCC-CCC-cE
Q 012991 29 IRDEFSHHQHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI----NAD-DVG-EI 101 (452)
Q Consensus 29 ir~~~~~~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~-~~~-~i 101 (452)
.++.....+++++.|+.+.+. ..|+.+.+++.+.+.. +. ...|....+..++|+++++++ |.+ +++ +|
T Consensus 21 ~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~----~~-~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I 95 (405)
T PRK09148 21 LKAAARAAGADIIDLGMGNPDLPTPQHIVDKLCETAQD----PR-THRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQV 95 (405)
T ss_pred HHHHHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHcC----cc-cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcE
Confidence 333333356788999888765 3466677777665421 11 123444455677888888776 432 255 89
Q ss_pred EEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHH
Q 012991 102 SLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGI 181 (452)
Q Consensus 102 ~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i 181 (452)
++|+|+++++.+++.++ +.+||+|++++|+|+.....+ ...|+++..+++. .++.+.+++++.+
T Consensus 96 ~it~G~~~al~~~~~~l--------~~~gd~Vl~~~P~y~~~~~~~----~~~g~~v~~v~~~----~~~~~~~~l~~~~ 159 (405)
T PRK09148 96 VATLGSKEGFANMAQAI--------TAPGDVILCPNPSYPIHAFGF----IMAGGVIRSVPAE----PDEEFFPALERAV 159 (405)
T ss_pred EEcCChHHHHHHHHHHh--------cCCCCEEEEcCCCCcccHHHH----HhcCCEEEEEeCC----CCCCCccCHHHHH
Confidence 99999999999999977 589999999999999875555 3459999999652 2222244555555
Q ss_pred hccccCCCceEEEEEeccCCCCcccccH---HHHHHHHHHcCCCEEEEecccccCCc----ccccccc----CccEEEEc
Q 012991 182 EKGKKDGKMIRLAIIDHITSMPCVVIPV---RKLVKICRDEGVDQVFVDAAHAMGSI----KIDVKEI----GADFYVSN 250 (452)
Q Consensus 182 ~~~~~~~~~~~lv~~~~~~n~tG~~~~l---~~i~~l~~~~~~~~~ivD~a~~~g~~----~~~~~~~----~~d~~~~s 250 (452)
+.. .+++++|++++|+||||.+++. ++|.++|++|++ ++|+|++++.... ...+... +..+++.|
T Consensus 160 ~~~---~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~-~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~S 235 (405)
T PRK09148 160 RHS---IPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDI-IILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTS 235 (405)
T ss_pred hhc---cccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCe-EEEEeccchhhhcCCCCCCChhhCCCccCcEEEEec
Confidence 422 3678999999999999999986 568889999999 7999999864221 1111111 23456889
Q ss_pred CcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHH
Q 012991 251 LHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNH 328 (452)
Q Consensus 251 ~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~ 328 (452)
++|. +|.+| +|+++.++++++. + .... .....+.+...+.++..+++.... -++..++.++
T Consensus 236 fSK~-~~~pGlR~G~~v~~~~~i~~-l-~~~~-----------~~~~~~~~~~~q~~~~~~L~~~~~---~~~~~~~~~~ 298 (405)
T PRK09148 236 MSKT-FSMAGWRMGFAVGNERLIAA-L-TRVK-----------SYLDYGAFTPIQVAATAALNGPQD---CIAEMRELYK 298 (405)
T ss_pred cccc-cCCcchheeeeeCCHHHHHH-H-HHHH-----------HHhccCCChHHHHHHHHHHhCcHH---HHHHHHHHHH
Confidence 9995 77777 8999988877765 1 1110 000011222233333333321111 3566777888
Q ss_pred HHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCC
Q 012991 329 EQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDK 408 (452)
Q Consensus 329 ~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~ 408 (452)
++++.+.+.|.+. ++.+..|.+ +.++|+.+|.... ..+..++.+.|.++.||.+.++..+..
T Consensus 299 ~~r~~l~~~L~~~-~~~~~~p~~--g~f~~~~l~~~~~---~~~~~~~~~~ll~~~gV~v~pg~~f~~------------ 360 (405)
T PRK09148 299 KRRDVLVESFGRA-GWDIPPPAA--SMFAWAPIPEAFR---HLGSLEFSKLLVEKADVAVAPGVGFGE------------ 360 (405)
T ss_pred HHHHHHHHHHHHc-CCccCCCCe--eEEEEEECCCccC---CCCHHHHHHHHHHhCCEEEeCchhhCC------------
Confidence 8899999999886 666544444 7789998873111 124567887776556999987665522
Q ss_pred CCCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 409 DGIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 409 ~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
..++++||++. .+.++++..++.|+++++.
T Consensus 361 --~~~~~~Ri~~~--~~~~~l~~al~~l~~~l~~ 390 (405)
T PRK09148 361 --HGDGYVRIALV--ENEQRIRQAARNIKRFLSS 390 (405)
T ss_pred --CCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 22579999997 3788888888888887753
No 87
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.96 E-value=2.2e-26 Score=227.54 Aligned_cols=340 Identities=15% Similarity=0.194 Sum_probs=227.6
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhC----C--CCCCcEEEecChhHH
Q 012991 38 HGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLIN----A--DDVGEISLVDNATTA 110 (452)
Q Consensus 38 ~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~----~--~~~~~i~~t~g~t~a 110 (452)
.+++.|..+.+. ..|+.+.+++.+.+... . . .|....+..+++++++++++ . ..+++|++|+|+++|
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~---~-~--~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~a 103 (391)
T PRK07309 30 PGILKLTLGEPDFTTPDHVKEAAKRAIDAN---Q-S--HYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEA 103 (391)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhcC---C-C--CCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHH
Confidence 578999887766 34566778887665421 1 1 13333445667777777663 3 123689999999999
Q ss_pred HHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCC
Q 012991 111 AAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGK 189 (452)
Q Consensus 111 ~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~ 189 (452)
+.+++.++ +.+||+|++++|.|.+....+ +..|.+++.++.+. +...+ ++.+++++++. .+
T Consensus 104 l~~~~~~~--------~~~gd~vl~~~p~y~~~~~~~----~~~g~~~~~~~~~~---~~~~~d~~~l~~~~~~~---~~ 165 (391)
T PRK07309 104 LSASLTAI--------LEPGDKVLLPAPAYPGYEPIV----NLVGAEIVEIDTTE---NDFVLTPEMLEKAILEQ---GD 165 (391)
T ss_pred HHHHHHHh--------cCCCCEEEEeCCCCcchHHHH----HHcCCEEEEEecCC---cCCcCCHHHHHHHhhcc---CC
Confidence 99999976 588999999999999865444 45699999886421 11234 78898888532 24
Q ss_pred ceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCc----ccccccc--CccEEEEcCcccCcCCCC
Q 012991 190 MIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSI----KIDVKEI--GADFYVSNLHKWFFCPPS 260 (452)
Q Consensus 190 ~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~----~~~~~~~--~~d~~~~s~~K~l~g~~G 260 (452)
++++|++++|+||||..++ +++|+++|++|++ ++|+|++++.... ..++... +-.+++.|++|. +|.+|
T Consensus 166 ~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~-~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~g~~G 243 (391)
T PRK07309 166 KLKAVILNYPANPTGVTYSREQIKALADVLKKYDI-FVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKS-HAMTG 243 (391)
T ss_pred CeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCc-EEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhh-ccCcc
Confidence 7899999999999999987 6778889999999 7999999864321 1122111 234788899995 76667
Q ss_pred --cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHH
Q 012991 261 --VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARML 338 (452)
Q Consensus 261 --~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L 338 (452)
+|+++.++++++. + .... . ....+++...+.++ ..++.+........+++++++++++.+.|
T Consensus 244 lRvG~~v~~~~~~~~-~-~~~~----------~-~~~~~~~~~~q~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 307 (391)
T PRK07309 244 WRIGLIFAPAEFTAQ-L-IKSH----------Q-YLVTAATTMAQFAA---VEALTNGKDDALPMKKEYIKRRDYIIEKM 307 (391)
T ss_pred ceeEEEEeCHHHHHH-H-HHHH----------h-hcccCCChHHHHHH---HHHHhCChhHHHHHHHHHHHHHHHHHHHH
Confidence 8999998887765 1 1110 0 00012222233333 33333210012345667778888888888
Q ss_pred HHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEe
Q 012991 339 ANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARI 418 (452)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRi 418 (452)
.+. ++.+..|.. +.++|+.+|.. ...+..++++.|.++.||.+.++..+.. ..++++|+
T Consensus 308 ~~~-~~~~~~p~g--g~~~~~~l~~~----~~~~~~~~~~~l~~~~gv~v~pg~~f~~--------------~~~~~iRi 366 (391)
T PRK07309 308 TDL-GFKIIKPDG--AFYIFAKIPAG----YNQDSFKFLQDFARKKAVAFIPGAAFGP--------------YGEGYVRL 366 (391)
T ss_pred HHC-CCeecCCCe--eEEEEEECCCC----CCCCHHHHHHHHHHhCCEEEeCchhhCC--------------CCCCEEEE
Confidence 876 676655544 66778888631 1124567887665556999977655422 23579999
Q ss_pred cccccCCHHHHHHHHHHHHHHHhc
Q 012991 419 SHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 419 s~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
+++. +.++++..+++|++++++
T Consensus 367 ~~~~--~~~~l~~~i~~l~~~~~~ 388 (391)
T PRK07309 367 SYAA--SMETIKEAMKRLKEYMEE 388 (391)
T ss_pred EecC--CHHHHHHHHHHHHHHHHh
Confidence 9985 678999999999998864
No 88
>PLN02880 tyrosine decarboxylase
Probab=99.96 E-value=3.1e-26 Score=229.90 Aligned_cols=339 Identities=13% Similarity=0.065 Sum_probs=222.3
Q ss_pred hhhhhHHHHHHHHHHHhHhCCCCC------CcEEEecChhHHHHHHHHHhhccccc--CCCC-CCCEEEEeCCcchhHHH
Q 012991 75 FNSLRKGILESRAAVKDLINADDV------GEISLVDNATTAAAIVLQQIGRGFTE--GRFH-RNDTVLMLHCAFQAVKK 145 (452)
Q Consensus 75 ~~~~~~~~~~~~~~la~~~~~~~~------~~i~~t~g~t~a~~~~~~~l~~~~~~--~~~~-~g~~Vl~~~~~~~s~~~ 145 (452)
+....++..++.+++++++|.++. ...++|+|||+|+..++.+....+.+ .... +.-.|++++..|.|+.+
T Consensus 117 sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~K 196 (490)
T PLN02880 117 SPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQK 196 (490)
T ss_pred CcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHH
Confidence 355678889999999999999732 24789999999998887754322210 0001 12256678889999988
Q ss_pred HHHHHHHhcCcE---EEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCC
Q 012991 146 SIQAYVTRAGGS---VVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGV 221 (452)
Q Consensus 146 ~~~~~a~~~g~~---v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~ 221 (452)
+...+ |+. ++.++++ .+..+.+ ++.|+++|++....+..|.+|+.+..++.+|.++|+++|+++|++||+
T Consensus 197 aa~~l----Glg~~~v~~Vp~d--~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~i 270 (490)
T PLN02880 197 ACQIA----GIHPENCRLLKTD--SSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGM 270 (490)
T ss_pred HHHHc----CCCHHHEEEeecC--CCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCC
Confidence 87654 763 7778542 1224456 999999998665456778999999999999999999999999999999
Q ss_pred CEEEEecccccCCccc-----cccc-cCccEEEEcCcccCcCCCCcEEEEEecCcc--cc-CCCCCceeccCCC-Ccccc
Q 012991 222 DQVFVDAAHAMGSIKI-----DVKE-IGADFYVSNLHKWFFCPPSVAFLYCRKSIL--SS-DMHHPVVSHEFGN-GLPIE 291 (452)
Q Consensus 222 ~~~ivD~a~~~g~~~~-----~~~~-~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~--~~-~l~~~~~~~~~~~-~~~~~ 291 (452)
++|||+|++.+.... .+.. .++|+++.++|||++.|.|+|++++++... .. ....+|+...... ....+
T Consensus 271 -wlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~ 349 (490)
T PLN02880 271 -WFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVD 349 (490)
T ss_pred -EEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCC
Confidence 599999998875533 2333 268999999999999999999999985221 11 0011111100000 00000
Q ss_pred cccccccCccccccHHHHHHHHHHhhcCHHHHHHHHH---HHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccC
Q 012991 292 SAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNH---EQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVM 368 (452)
Q Consensus 292 ~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~---~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (452)
....+.+......++...+. ++.+ |.+.+++++. ++++++.+.|.+.+++++..++. .++++|+++......
T Consensus 350 ~~~~~i~~~rr~~alklw~~-l~~~--G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~--~~iv~Fr~~~~~~~~ 424 (490)
T PLN02880 350 YKDWQIPLGRRFRSLKLWMV-LRLY--GVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRI--FSLVCFRLVPPKNNE 424 (490)
T ss_pred hhccCcCCCCcccHHHHHHH-HHHh--CHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCc--eEEEEEEEeCCCCCh
Confidence 00001111111122222111 2223 5555555555 99999999999988999888765 778999886210000
Q ss_pred Chhh--HHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCC-HHHHHHHHHHHHHHHhc
Q 012991 369 GEDD--ALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNT-LEDYEKFRDAVILLVEE 442 (452)
Q Consensus 369 ~~~~--~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t-~~di~~l~~~l~~~~~~ 442 (452)
...+ ..++.+.|.+...+++..... ....++|+|++.++| .+||+.+++.|+++.++
T Consensus 425 ~~~~~~n~~l~~~l~~~g~~~v~~t~~-----------------~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~ 484 (490)
T PLN02880 425 DNGNKLNHDLLDAVNSSGKIFISHTVL-----------------SGKYVLRFAVGAPLTEERHVTAAWKVLQDEASK 484 (490)
T ss_pred hhHHHHHHHHHHHHHhCCCEEEEEEEE-----------------CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 0011 235777776666777654333 234699999977665 59999999999888654
No 89
>PRK08068 transaminase; Reviewed
Probab=99.96 E-value=1.3e-26 Score=229.19 Aligned_cols=335 Identities=13% Similarity=0.120 Sum_probs=224.4
Q ss_pred CCCCeEEeccCCCCC-CcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh----CCC-CCC-cEEEecChh
Q 012991 36 HQHGVARINNGSFGS-CPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI----NAD-DVG-EISLVDNAT 108 (452)
Q Consensus 36 ~~~~~~~l~~~~~~~-~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~-~~~-~i~~t~g~t 108 (452)
.+++++.|+.+.+.. .++.+.+++.+.+.. + ....|....+..++|+++++++ |.+ +++ +|++|+|++
T Consensus 30 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~----~-~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~ 104 (389)
T PRK08068 30 EGHDVINLGQGNPDQPTPEHIVEALQEAAEN----P-ANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGK 104 (389)
T ss_pred cCCCeEEecCCCCCCCCCHHHHHHHHHHHhC----C-CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcH
Confidence 346789999887663 456677777776542 1 1123434455677888888886 532 256 799999999
Q ss_pred HHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccC
Q 012991 109 TAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKD 187 (452)
Q Consensus 109 ~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~ 187 (452)
+++..++.++ +++||+|++++|+|......+ +..|++++.+++.. +....+ ++++++.+
T Consensus 105 ~~l~~~~~~~--------~~~gd~vlv~~P~y~~~~~~~----~~~g~~~~~i~~~~--~~~~~~d~~~l~~~~------ 164 (389)
T PRK08068 105 AGLVELPQCL--------MNPGDTILVPDPGYPDYLSGV----ALARAQFETMPLIA--ENNFLPDYTKIPEEV------ 164 (389)
T ss_pred HHHHHHHHHh--------CCCCCEEEEcCCCCcchHHHH----HhcCCEEEEeeccc--ccCCCCCHHHHHHhc------
Confidence 9999988876 589999999999998765554 44699999996521 111233 78888887
Q ss_pred CCceEEEEEeccCCCCcccccHH---HHHHHHHHcCCCEEEEecccccCC----cccccc----ccCccEEEEcCcccCc
Q 012991 188 GKMIRLAIIDHITSMPCVVIPVR---KLVKICRDEGVDQVFVDAAHAMGS----IKIDVK----EIGADFYVSNLHKWFF 256 (452)
Q Consensus 188 ~~~~~lv~~~~~~n~tG~~~~l~---~i~~l~~~~~~~~~ivD~a~~~g~----~~~~~~----~~~~d~~~~s~~K~l~ 256 (452)
.+++++|++++|+||||.+++.+ +|+++|+++++ ++|+|+++.... .+.... ..+..+++.|++|. +
T Consensus 165 ~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~-~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~-~ 242 (389)
T PRK08068 165 AEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNI-GVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKT-F 242 (389)
T ss_pred cccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCe-EEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhc-c
Confidence 45789999999999999999865 67788999999 799999985311 111111 11234788899995 7
Q ss_pred CCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 012991 257 CPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKM 334 (452)
Q Consensus 257 g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l 334 (452)
|.+| +|+++.++++++. + ..... ....+.+.. .+. ++...+.+-..-++..++++++.++.+
T Consensus 243 g~~GlRiG~~~~~~~l~~~-l-~~~~~----------~~~~~~~~~-~q~---~~~~~l~~~~~~~~~~~~~~~~~r~~~ 306 (389)
T PRK08068 243 NMAGWRVAFAVGNESVIEA-I-NLLQD----------HLFVSLFGA-IQD---AAIEALLSDQSCVAELVARYESRRNAF 306 (389)
T ss_pred CCccceeEeEecCHHHHHH-H-HHHHh----------hccCCCChH-HHH---HHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 7777 8999888877765 1 11100 000011111 112 222222210012566788888889999
Q ss_pred HHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccc
Q 012991 335 ARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITG 414 (452)
Q Consensus 335 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (452)
.+.|.+. ++.+..+.+ +.++|+.++ ...++.++.+.|.+++||.+.++..+.. ...+
T Consensus 307 ~~~L~~~-g~~~~~~~g--~~~~~v~~~------~~~~~~~~~~~l~~~~gi~v~pg~~f~~--------------~~~~ 363 (389)
T PRK08068 307 ISACREI-GWEVDAPKG--SFFAWMPVP------KGYTSEQFADLLLEKAHVAVAPGNGFGE--------------HGEG 363 (389)
T ss_pred HHHHHHC-CCcccCCCe--eEEEEEECC------CCCCHHHHHHHHHHhCCEEEecchHhCc--------------cCCC
Confidence 9999886 776554443 667888886 3457788999997657999977655421 2357
Q ss_pred eEEecccccCCHHHHHHHHHHHHH
Q 012991 415 YARISHQVYNTLEDYEKFRDAVIL 438 (452)
Q Consensus 415 ~iRis~~~~~t~~di~~l~~~l~~ 438 (452)
++||+++. +++.++..++.|++
T Consensus 364 ~iRi~~~~--~~~~l~~al~~l~~ 385 (389)
T PRK08068 364 YVRVGLLT--DEERLREAVERIGK 385 (389)
T ss_pred eEEEEEcC--CHHHHHHHHHHHHH
Confidence 99999974 56666666666654
No 90
>PRK07337 aminotransferase; Validated
Probab=99.96 E-value=3.3e-26 Score=226.29 Aligned_cols=342 Identities=15% Similarity=0.133 Sum_probs=227.6
Q ss_pred CCCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh----CCC-CCCcEEEecChhH
Q 012991 36 HQHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI----NAD-DVGEISLVDNATT 109 (452)
Q Consensus 36 ~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~-~~~~i~~t~g~t~ 109 (452)
.++++++|+.+.+. +.|+.+.+++.+.+... . ..|....+..++|+.+++++ |.+ ++++|++|+|+++
T Consensus 28 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~----~--~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~ 101 (388)
T PRK07337 28 AGRDIIHMGIGEPDFTAPEPVVEAAARALRRG----V--TQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASA 101 (388)
T ss_pred cCCCEEEeCCcCCCCCCCHHHHHHHHHHHhcC----C--CCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHH
Confidence 45789999998876 45677888887765421 1 12333345677888888876 431 3689999999999
Q ss_pred HHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCC
Q 012991 110 AAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDG 188 (452)
Q Consensus 110 a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~ 188 (452)
|+.+++.++ +++||+|++++|+|+++...+ ...|.+++.++++ .++...+ ++++++.+ .
T Consensus 102 al~~~~~~l--------~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~~~~~--~~~~~~~~~~~l~~~~------~ 161 (388)
T PRK07337 102 ALLLACLAL--------VERGDEVLMPDPSYPCNRHFV----AAAEGRPVLVPSG--PAERFQLTAADVEAAW------G 161 (388)
T ss_pred HHHHHHHHh--------cCCCCEEEEeCCCchhhHHHH----HHcCCEEEEeecC--CccCCcCCHHHHHhhc------C
Confidence 999999876 589999999999999875554 4458899988652 1122344 88999888 5
Q ss_pred CceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCc---cccccccCccE-EEEcCcccCcCCCC-
Q 012991 189 KMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSI---KIDVKEIGADF-YVSNLHKWFFCPPS- 260 (452)
Q Consensus 189 ~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~---~~~~~~~~~d~-~~~s~~K~l~g~~G- 260 (452)
+++++|++++++||||.+++ +++|+++|+++++ ++|+|+++..-.. +......+.++ ++.|++|. +|.+|
T Consensus 162 ~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~-~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~-~~~~G~ 239 (388)
T PRK07337 162 ERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGG-FTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKY-FNMTGW 239 (388)
T ss_pred ccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCC-EEEEeccccccccCCCCcChhhccCCEEEEEechhh-cCCchh
Confidence 78899999999999999987 5677888999999 7999998753211 11222223344 56799996 66666
Q ss_pred -cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHHH
Q 012991 261 -VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRF-EGGIDGIMQRNHEQALKMARML 338 (452)
Q Consensus 261 -~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~-~~g~~~~~~~~~~~~~~l~~~L 338 (452)
+|++++++++++. + ..... .+....+...+.++..++ ... ....++.++.++++++.+.+.|
T Consensus 240 RiG~~~~~~~l~~~-l-~~~~~-----------~~~~~~s~~~q~~~~~~l---~~~~~~~~~~~~~~~~~~r~~~~~~L 303 (388)
T PRK07337 240 RLGWLVVPEALVGT-F-EKLAQ-----------NLFICASALAQHAALACF---EPDTLAIYERRRAEFKRRRDFIVPAL 303 (388)
T ss_pred heeeeecCHHHHHH-H-HHHHH-----------HhccCCChHHHHHHHHHh---ccCchHHHHHHHHHHHHHHHHHHHHH
Confidence 8999988776664 1 11100 000122222332322232 210 0024556677788888899999
Q ss_pred HHHcCCCc-CCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEE
Q 012991 339 ANAWGTSL-GSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYAR 417 (452)
Q Consensus 339 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iR 417 (452)
.+. ++.+ ..|.+ ++++|+.++.... .+..+..++++.|.++.||.+.++..+.. ....+++|
T Consensus 304 ~~~-~~~~~~~p~~--g~f~~~~~~~~~~-~~~~~~~~~~~~ll~~~gv~v~pg~~f~~-------------~~~~~~~R 366 (388)
T PRK07337 304 ESL-GFKVPVMPDG--AFYVYADCRGVAH-PAAGDSAALTQAMLHDAGVVLVPGRDFGP-------------HAPRDYIR 366 (388)
T ss_pred Hhc-CCccccCCCe--eEEEEEecccccC-CCCCCHHHHHHHHHHhCCEEEeCchhhCC-------------CCCCCEEE
Confidence 886 6554 23433 7889998862100 01235678887765557999977655421 12357999
Q ss_pred ecccccCCHHHHHHHHHHHHHHH
Q 012991 418 ISHQVYNTLEDYEKFRDAVILLV 440 (452)
Q Consensus 418 is~~~~~t~~di~~l~~~l~~~~ 440 (452)
++++. +.++++..+++|++++
T Consensus 367 i~~~~--~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 367 LSYAT--SMSRLEEAVARLGKLF 387 (388)
T ss_pred EEecC--CHHHHHHHHHHHHHHh
Confidence 99985 5788888888887654
No 91
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.96 E-value=1e-25 Score=223.80 Aligned_cols=341 Identities=12% Similarity=0.150 Sum_probs=229.5
Q ss_pred CCeEEeccCC-CC-CCcHHHHHHHHHHHHHHhcCCchh-hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHH
Q 012991 38 HGVARINNGS-FG-SCPKSVLADQQKWQLKFLQQPDDF-YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIV 114 (452)
Q Consensus 38 ~~~~~l~~~~-~~-~~p~~v~e~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~ 114 (452)
+.++.|..+. .+ ..++.+.+++.+.+..+....... ..+...+...++++.+++++|.+ ..+++++|++|+..+
T Consensus 45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~~---~~l~~~sG~~an~~a 121 (402)
T TIGR01821 45 KDVTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGKE---SALVFTSGYVANDAT 121 (402)
T ss_pred eeEEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCCC---eEEEECchHHHHHHH
Confidence 4556554443 44 345569999999887754322211 12334566789999999999974 456677778999988
Q ss_pred HHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEE
Q 012991 115 LQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLA 194 (452)
Q Consensus 115 ~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv 194 (452)
+.++.. ..+++.|+.+...|.+...++. ..|.++..+ +..+ .+++++.++... ..++++|
T Consensus 122 i~~l~~------~~~~~~v~~~~~~h~s~~~~~~----~~g~~~~~~----~~~d----~~~l~~~l~~~~--~~~~~~v 181 (402)
T TIGR01821 122 LATLAK------IIPGCVIFSDELNHASMIEGIR----HSGAEKFIF----RHND----VAHLEKLLQSVD--PNRPKII 181 (402)
T ss_pred HHHhhC------CCCCCEEEEcchHhHHHHHHHH----HcCCeEEEE----CCCC----HHHHHHHHHhcc--CCCCeEE
Confidence 887631 2356777777778887766654 357777666 3332 355666664320 2368999
Q ss_pred EEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccc---c-cc--c--cCccEEEEcCcccCcCCCCcEEEEE
Q 012991 195 IIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKI---D-VK--E--IGADFYVSNLHKWFFCPPSVAFLYC 266 (452)
Q Consensus 195 ~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~---~-~~--~--~~~d~~~~s~~K~l~g~~G~G~l~~ 266 (452)
++++++|++|.+.|+++|.++|++||+ ++|+|++|+.|...- . .. . ..+|+++.+++|. +|+.| |+++.
T Consensus 182 ~~e~~~~~~G~~~~l~~i~~l~~~~~~-~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa-~g~~G-G~i~~ 258 (402)
T TIGR01821 182 AFESVYSMDGDIAPIEEICDLADKYGA-LTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKA-FGVVG-GYIAA 258 (402)
T ss_pred EEcCCCCCCCCccCHHHHHHHHHHcCC-EEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhh-hccCC-ceeec
Confidence 999999999999999999999999999 799999998664311 1 01 1 1368898999997 56666 78777
Q ss_pred ecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 012991 267 RKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSL 346 (452)
Q Consensus 267 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~ 346 (452)
++++++. + ..... ...+.++.+...+.+..++++.+.+ . +.++++.+++++++.+.|.++ ++.+
T Consensus 259 ~~~~~~~-l-~~~~~---------~~~~t~~~~~~~~aaa~aaL~~~~~---~-~~~~~~~~~~~~~l~~~L~~~-g~~~ 322 (402)
T TIGR01821 259 SRKLIDA-I-RSYAP---------GFIFTTSLPPAIAAGATASIRHLKE---S-QDLRRAHQENVKRLKNLLEAL-GIPV 322 (402)
T ss_pred CHHHHHH-H-HHhCc---------CceecCcCCHHHHHHHHHHHHHhhc---C-HHHHHHHHHHHHHHHHHHHHc-CCCc
Confidence 7776654 1 11000 0001123333345555567777664 2 556667788999999999886 7765
Q ss_pred CCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCH
Q 012991 347 GSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTL 426 (452)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~ 426 (452)
..+. ++++.+.++ ...++.++.+.|.+++||.++....+.. .....++|++++.++|+
T Consensus 323 ~~~~---~~i~~i~~~------~~~~a~~~~~~L~~~~Gi~v~~~~~p~~-------------~~g~~~lRis~~~~~t~ 380 (402)
T TIGR01821 323 IPNP---SHIVPVIIG------DAALCKKVSDLLLNKHGIYVQPINYPTV-------------PRGTERLRITPTPAHTD 380 (402)
T ss_pred CCCC---CCEEEEEeC------CHHHHHHHHHHHHhcCCEEEEeECCCCC-------------CCCCceEEEEeCCCCCH
Confidence 5432 556666554 2235667888886556999976433211 12346899999999999
Q ss_pred HHHHHHHHHHHHHHhc
Q 012991 427 EDYEKFRDAVILLVEE 442 (452)
Q Consensus 427 ~di~~l~~~l~~~~~~ 442 (452)
+||++++++|++++++
T Consensus 381 edi~~~~~~l~~~~~~ 396 (402)
T TIGR01821 381 KMIDDLVEALLLVWDR 396 (402)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998864
No 92
>PLN02590 probable tyrosine decarboxylase
Probab=99.96 E-value=5.4e-26 Score=227.98 Aligned_cols=339 Identities=12% Similarity=0.043 Sum_probs=229.3
Q ss_pred hhhhhHHHHHHHHHHHhHhCCCCC------CcEEEecChhHHHHHHHHHhhcccccC---CCCCCCEEEEeCCcchhHHH
Q 012991 75 FNSLRKGILESRAAVKDLINADDV------GEISLVDNATTAAAIVLQQIGRGFTEG---RFHRNDTVLMLHCAFQAVKK 145 (452)
Q Consensus 75 ~~~~~~~~~~~~~~la~~~~~~~~------~~i~~t~g~t~a~~~~~~~l~~~~~~~---~~~~g~~Vl~~~~~~~s~~~ 145 (452)
+....++..++.+++++++|.++. ...+||+|||+|+..++.+......+. ...+.-.|++++..|.|+.+
T Consensus 165 sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~K 244 (539)
T PLN02590 165 SPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRK 244 (539)
T ss_pred CchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHH
Confidence 456678899999999999999732 347899999999988876543222110 00122256667889999888
Q ss_pred HHHHHHHhcCc---EEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCC
Q 012991 146 SIQAYVTRAGG---SVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGV 221 (452)
Q Consensus 146 ~~~~~a~~~g~---~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~ 221 (452)
+...+ |+ .++.++++ ..+.+.+ ++.|+++|++....+..|.+|+.+..++.+|.++|+++|+++|++||+
T Consensus 245 Aa~il----Glg~~~vr~Vp~d--~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~ 318 (539)
T PLN02590 245 ACLIG----GIHEENIRLLKTD--SSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGI 318 (539)
T ss_pred HHHHc----CCCcccEEEEeCC--CCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCC
Confidence 86554 76 58888542 1123566 999999998665556779999999999999999999999999999999
Q ss_pred CEEEEecccccCCcccc-c----c-ccCccEEEEcCcccCcCCCCcEEEEEecCc--ccc-CCCCCceeccC---CCCc-
Q 012991 222 DQVFVDAAHAMGSIKID-V----K-EIGADFYVSNLHKWFFCPPSVAFLYCRKSI--LSS-DMHHPVVSHEF---GNGL- 288 (452)
Q Consensus 222 ~~~ivD~a~~~g~~~~~-~----~-~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~--~~~-~l~~~~~~~~~---~~~~- 288 (452)
| +|||+|++......+ . . -..+|.++.++|||++.|.++|++++++.. ... ....+|+.... +...
T Consensus 319 W-lHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d 397 (539)
T PLN02590 319 W-LHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVN 397 (539)
T ss_pred e-EEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCC
Confidence 5 999999876654221 1 1 124799999999999999999999998642 111 01122221110 0000
Q ss_pred ccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccC
Q 012991 289 PIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVM 368 (452)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (452)
..+.....+.. ...+.++.+++.+..- |+.++.++..++++++.+.|.+.+++++..++. .++++|++.......
T Consensus 398 ~~d~~i~lsRr-~raLklW~~lr~~G~~--G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~--l~iVcFr~~~~~~~~ 472 (539)
T PLN02590 398 YKDWQISLSRR-FRSLKLWMVLRLYGSE--NLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRY--FSLVCFRLAPVDGDE 472 (539)
T ss_pred ccccCCCCCCc-hHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCc--eEEEEEEecCCCCCH
Confidence 00000011222 2334556666666643 889999999999999999999998999888765 778999874210000
Q ss_pred C--hhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEeccc-ccCCHHHHHHHHHHHHHHHhc
Q 012991 369 G--EDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQ-VYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 369 ~--~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~-~~~t~~di~~l~~~l~~~~~~ 442 (452)
. ..-..++.+.|.+. |........ .....+||+++. +.++++||+.+++.|.+...+
T Consensus 473 ~~~~~ln~~l~~~l~~~-G~~~vs~t~----------------~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~ 532 (539)
T PLN02590 473 DQCNERNRELLAAVNST-GKIFISHTA----------------LSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASK 532 (539)
T ss_pred HHHHHHHHHHHHHHHhC-CCEEEEeeE----------------ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 0 11134677787765 544322222 123458999984 557789999999999987654
No 93
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.96 E-value=1.6e-26 Score=225.23 Aligned_cols=327 Identities=13% Similarity=0.091 Sum_probs=218.8
Q ss_pred eEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh----CCC-CCC-cEEEecChhHHHH
Q 012991 40 VARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI----NAD-DVG-EISLVDNATTAAA 112 (452)
Q Consensus 40 ~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~-~~~-~i~~t~g~t~a~~ 112 (452)
++.|+.+.+. +.|+.+.+++.+..... ..|....+..++|+++++++ |.+ +++ +|++|+|+++++.
T Consensus 2 ~~~~~~g~p~~~~~~~~~~~~~~~~~~~-------~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~ 74 (350)
T TIGR03537 2 LFDFGTGDPKEPTPPFIRKALIDAVPEV-------SQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIF 74 (350)
T ss_pred eEeccCCCCCCCCCHHHHHHHHHHHhcc-------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHH
Confidence 4556666554 33666888887764321 12333344567777777775 642 255 8999999999999
Q ss_pred HHHHHhhcccccCCCCCC---CEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCC
Q 012991 113 IVLQQIGRGFTEGRFHRN---DTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDG 188 (452)
Q Consensus 113 ~~~~~l~~~~~~~~~~~g---~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~ 188 (452)
.++.++ +++| |+|++++|.|+.....+. ..|.+++.+++.. ++...+ ++++++++ .
T Consensus 75 ~~~~~~--------~~~g~~~d~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~~--~~~~~~d~~~l~~~~------~ 134 (350)
T TIGR03537 75 HFPLVF--------IDPEEDRRRVIFGTPGYPVYERGAL----FAGGEPTAVKLKK--EDGFLLRLEKVEKSI------L 134 (350)
T ss_pred HHHHHH--------cCCCCCCceEEEcCCCCcchHHHHH----hcCCEEEEcccCc--ccCCccCHHHHHHhh------h
Confidence 998877 3555 799999999998766654 4699999996521 112234 88999888 4
Q ss_pred CceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCC---cccccccc--CccEEEEcCcccCcCCCC
Q 012991 189 KMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGS---IKIDVKEI--GADFYVSNLHKWFFCPPS 260 (452)
Q Consensus 189 ~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~---~~~~~~~~--~~d~~~~s~~K~l~g~~G 260 (452)
++++++++++++||||.++| +++|+++|+++|+ ++|+|++++... ....+... +..+++.|++|. +|.+|
T Consensus 135 ~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~-~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~-~g~~G 212 (350)
T TIGR03537 135 EETKIVWINYPHNPTGATAPRSYLKETIAMCREHGI-ILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKR-SGMTG 212 (350)
T ss_pred hccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCc-EEEEeccccccccCCCCCchhhcCcCCEEEEeecccc-cCCcc
Confidence 57899999999999999998 7788899999999 899999986422 11122211 234777799996 66666
Q ss_pred --cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHH
Q 012991 261 --VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARML 338 (452)
Q Consensus 261 --~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L 338 (452)
+|+++.+++++.. + ..... . +..+.+...+.++..++. . ....+..+++++++.+.+.+.|
T Consensus 213 lRiG~~~~~~~~~~~-~-~~~~~----------~-~~~~~~~~~q~~~~~~l~---~-~~~~~~~r~~l~~~~~~~~~~l 275 (350)
T TIGR03537 213 YRSGFVAGDEKLISF-L-RKLRA----------N-FGVASPDFVQAAAKAAWS---D-DNHVLERRKIFKRKRDLFIEFF 275 (350)
T ss_pred ccceeeecCHHHHHH-H-HHHHH----------h-hccCCCHHHHHHHHHHhC---C-cHHHHHHHHHHHHHHHHHHHHH
Confidence 7888877666654 1 11100 0 001111112222222222 1 1134566777888888888888
Q ss_pred HHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEe
Q 012991 339 ANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARI 418 (452)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRi 418 (452)
.+. ++++..+.. +.++|+.+| ...++.++++.|.+ .||.+..+..+.. ..++++|+
T Consensus 276 ~~~-g~~~~~~~g--~~~~~~~~~------~~~~~~~l~~~L~~-~gv~v~~g~~f~~--------------~~~~~~Ri 331 (350)
T TIGR03537 276 NKV-GLEYLYPDA--TFYLWVKVP------SGIDAKDYALRLLE-NGIVVAPGENFGS--------------GEEGYVRV 331 (350)
T ss_pred HHC-CCcccCCCe--EEEEEEECC------CCCCHHHHHHHHHH-CCEEEcCchhhCC--------------CCCCEEEE
Confidence 876 666555443 667888887 34567789999977 5999977655421 22579999
Q ss_pred cccccCCHHHHHHHHHHHHH
Q 012991 419 SHQVYNTLEDYEKFRDAVIL 438 (452)
Q Consensus 419 s~~~~~t~~di~~l~~~l~~ 438 (452)
++. .+.++++..++.+++
T Consensus 332 ~~~--~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 332 ALV--PTLEECEEALRLWER 349 (350)
T ss_pred Eec--CCHHHHHHHHHHHhc
Confidence 986 478889998888765
No 94
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=1.1e-26 Score=227.09 Aligned_cols=325 Identities=15% Similarity=0.128 Sum_probs=228.1
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHH
Q 012991 37 QHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVL 115 (452)
Q Consensus 37 ~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~ 115 (452)
+.++++|+.+..+ +.|+.+.+++.+.+... ....|+ . ....++|+.++++++.+..++|++|+|+++++..++
T Consensus 25 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~Y~--~-~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~ 98 (356)
T PRK04870 25 ATGMVKLDAMENPYRLPAELRAELGERLAEV---ALNRYP--D-PRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLA 98 (356)
T ss_pred CCCceeCcCCCCCCCCCHHHHHHHHHHhhcc---ccccCC--C-CCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHH
Confidence 3578999888766 57778999998876421 111122 1 235889999999999863358999999999999999
Q ss_pred HHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEE
Q 012991 116 QQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLA 194 (452)
Q Consensus 116 ~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv 194 (452)
.++ +++||+|++++|.|...... ++..|++++.+++ ++++.+ ++++++.++ ..++++|
T Consensus 99 ~~~--------~~~gd~vlv~~P~y~~~~~~----~~~~g~~~~~i~~----~~~~~~d~~~l~~~~~-----~~~~~~v 157 (356)
T PRK04870 99 LAC--------AKPGATVLAPEPGFVMYRMS----AKLAGLEFVGVPL----TADFTLDLPAMLAAIA-----EHRPALV 157 (356)
T ss_pred HHh--------cCCCCEEEECCCCHHHHHHH----HHHcCCEEEEecC----CCCCCCCHHHHHHHhh-----cCCCCEE
Confidence 876 58899999999999875443 4667999999954 333344 899999885 3578999
Q ss_pred EEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCc-c--ccccccCccEEEEcCcccCcCCCC--cEEEEEecC
Q 012991 195 IIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSI-K--IDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRKS 269 (452)
Q Consensus 195 ~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~-~--~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~ 269 (452)
++++++||||.++|.+++.++++..++ ++|+|+++..... . ..+...+-.+++.|++| + +.+| +|+++++++
T Consensus 158 ~l~~p~NPtG~~~~~~~~~~i~~~~~~-~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK-~-~~~GlRiG~~i~~~~ 234 (356)
T PRK04870 158 FLAYPNNPTGNLFDDADVERIIEAAPG-LVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSK-L-GLAGLRLGYLAGHPA 234 (356)
T ss_pred EEcCCCCCCCCCCCHHHHHHHHHHCCC-EEEEECCchhhcCcchHHHHhhCCCEEEEecchh-h-hhHHHhhhhhhCCHH
Confidence 999999999999999998888877788 7999998753211 1 01222233578889999 3 5666 899988877
Q ss_pred ccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCC
Q 012991 270 ILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSP 349 (452)
Q Consensus 270 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 349 (452)
++.. +. .... ....+...+.+...+++... .++..+++++++++.+.+.|..++++.+. +
T Consensus 235 ~i~~-~~-~~~~-------------~~~~~~~~q~~a~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~ 294 (356)
T PRK04870 235 WIAE-LD-KVRP-------------PYNVNVLTQATALFALEHVD----VLDAQAAQLRAERTRLAAALAALPGVTVF-P 294 (356)
T ss_pred HHHH-HH-HccC-------------CCcCCHHHHHHHHHHHhCHH----HHHHHHHHHHHHHHHHHHHHHhCCCcEEC-C
Confidence 7665 21 1100 01122222222233333211 35667777888899999999887776543 3
Q ss_pred cccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHH
Q 012991 350 PEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDY 429 (452)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di 429 (452)
+. ++++|+.++ +..++.+.|.+ +||.+..+..+.. ..++++|+|++ +.+++
T Consensus 295 ~~--~~~~~~~~~---------~~~~~~~~l~~-~gI~v~~~~~f~~--------------~~~~~iRis~~---~~~~~ 345 (356)
T PRK04870 295 SA--ANFILVRVP---------DAAAVFDGLKT-RGVLVKNLSGMHP--------------LLANCLRVTVG---TPEEN 345 (356)
T ss_pred CC--CeEEEEECC---------CHHHHHHHHHH-CCEEEEECCCCCC--------------CCCCeEEEeCC---CHHHH
Confidence 33 668888774 34678888865 5999976544311 23579999998 79999
Q ss_pred HHHHHHHHHHH
Q 012991 430 EKFRDAVILLV 440 (452)
Q Consensus 430 ~~l~~~l~~~~ 440 (452)
++++++|++++
T Consensus 346 ~~l~~al~~~~ 356 (356)
T PRK04870 346 AQFLAALKAAL 356 (356)
T ss_pred HHHHHHHHHhC
Confidence 99999998753
No 95
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.96 E-value=2.6e-26 Score=227.96 Aligned_cols=345 Identities=14% Similarity=0.133 Sum_probs=229.9
Q ss_pred CCCeEEeccCCCC-----CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhC-----CCCCCcEEEecC
Q 012991 37 QHGVARINNGSFG-----SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLIN-----ADDVGEISLVDN 106 (452)
Q Consensus 37 ~~~~~~l~~~~~~-----~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-----~~~~~~i~~t~g 106 (452)
+..++.|+.+.+. +.++.+.+++.+.+... ....|....+..+++++++++++ ++ +++|++|+|
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~Y~~~~g~~~lr~aia~~~~~~~~~~~-~~~i~~t~G 103 (401)
T TIGR01264 30 EKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSG-----KYNGYAPTVGALSAREAIASYYHNPDGPIE-ADDVVLCSG 103 (401)
T ss_pred CCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhcc-----CCCCCCCCCCCHHHHHHHHHHHhhcCCCCC-HHHEEECcC
Confidence 4678999988763 45677888887765421 11224445567889999999987 53 689999999
Q ss_pred hhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccc
Q 012991 107 ATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGK 185 (452)
Q Consensus 107 ~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~ 185 (452)
+++++.+++.++ +++||+|++++|.|...... ++..|+++..++++ .+++..+ ++.+++.+
T Consensus 104 ~~~al~~~~~~l--------~~~gd~v~i~~P~y~~~~~~----~~~~g~~v~~~~~~--~~~~~~~d~~~l~~~~---- 165 (401)
T TIGR01264 104 CSHAIEMCIAAL--------ANAGQNILVPRPGFPLYETL----AESMGIEVKLYNLL--PDKSWEIDLKQLESLI---- 165 (401)
T ss_pred hHHHHHHHHHHh--------CCCCCEEEEeCCCChhHHHH----HHHcCCEEEEeecC--CccCCCCCHHHHHHHh----
Confidence 999999999977 47899999999999765444 45569999988652 1222334 88888888
Q ss_pred cCCCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCc----cccccccC---ccEEEEcCcccC
Q 012991 186 KDGKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSI----KIDVKEIG---ADFYVSNLHKWF 255 (452)
Q Consensus 186 ~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~----~~~~~~~~---~d~~~~s~~K~l 255 (452)
..++++|++++++||||.+++ +++|+++|+++|+ ++|+|+++..... ...+.... ..+++.|++|.
T Consensus 166 --~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~-~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~- 241 (401)
T TIGR01264 166 --DEKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCL-PIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKR- 241 (401)
T ss_pred --ccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCC-EEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCccc-
Confidence 456899999999999999987 6678889999999 7999999763221 11111111 23678899995
Q ss_pred cCCCC--cEEEEEecC--ccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHH
Q 012991 256 FCPPS--VAFLYCRKS--ILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQA 331 (452)
Q Consensus 256 ~g~~G--~G~l~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~ 331 (452)
++.+| +|++++.+. .+.. +...... ... ....++...+.++..+++... ..-++..++++++.+
T Consensus 242 ~~~~GlRiG~iv~~~~~~~~~~-~~~~~~~--------~~~-~~~~~~~~~q~a~~~~l~~~~--~~~l~~~~~~~~~~r 309 (401)
T TIGR01264 242 WLVPGWRLGWIIIHDRRGILRD-IRDGLVK--------LSQ-RILGPCTIVQGALPSILLRTP--QEYFDGTLSVLESNA 309 (401)
T ss_pred CCCccceEEEEEecCcchhHHH-HHHHHHH--------Hhh-ccCCCCcHHHHHHHHHHHhCc--HHHHHHHHHHHHHHH
Confidence 66777 888887642 1111 0000000 000 001223333333333332210 113566777888888
Q ss_pred HHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCC
Q 012991 332 LKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGI 411 (452)
Q Consensus 332 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~ 411 (452)
+.+.+.|.+++++.+..|.+ ++++|+.++... ..+..+..++.+.|.+++||.+.++..+ .
T Consensus 310 ~~l~~~L~~~~~~~~~~p~~--g~f~~~~~~~~~-~~~~~~~~~~~~~l~~~~gI~v~pg~~f----------------~ 370 (401)
T TIGR01264 310 MLCYGALAAVPGLRPVMPSG--AMYMMVGIEMEH-FPEFKNDVEFTERLVAEQSVFCLPGSCF----------------E 370 (401)
T ss_pred HHHHHHHHhCCCCcccCCCe--eeEEEEEecccc-cCCCCCHHHHHHHHHHhCCEEEeCchhc----------------C
Confidence 89999998876666555544 888998875210 0012345678888765569999766543 1
Q ss_pred ccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 412 ITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 412 ~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
.++++|++++. +.++++..+++|.+++++
T Consensus 371 ~~~~iRis~~~--~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 371 YPGFFRVVLTV--PVVMMEEACSRIQEFCER 399 (401)
T ss_pred CCCeEEEEEcC--CHHHHHHHHHHHHHHHhc
Confidence 25799999985 678899999999988754
No 96
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.96 E-value=3.2e-26 Score=220.02 Aligned_cols=321 Identities=18% Similarity=0.231 Sum_probs=234.9
Q ss_pred CeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhC-CCCCCcEEEecChhHHHHHHHH
Q 012991 39 GVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLIN-ADDVGEISLVDNATTAAAIVLQ 116 (452)
Q Consensus 39 ~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~i~~t~g~t~a~~~~~~ 116 (452)
+++.|+.+... ..|+.+.+++.+....+..+|+. ...+++++++++++ .+ +++|++++|+++.+..+++
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~~~~~~~~~rYPd~--------~~~~l~~a~a~~~~~~~-~~~V~~gnGsde~i~~l~~ 93 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAIRAALDKLNRYPDP--------DYRELRAALAEYYGVVD-PENVLVGNGSDELIELLVR 93 (356)
T ss_pred cceeecCCCCCCCCCHHHHHHHHHHHHhhccCCCC--------cHHHHHHHHHHHhCCCC-cceEEEcCChHHHHHHHHH
Confidence 57777766655 33366888888877655444444 37889999999999 54 7899999999999999999
Q ss_pred HhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEE
Q 012991 117 QIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAI 195 (452)
Q Consensus 117 ~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~ 195 (452)
++ ..+||.|+++.|+|..+... ++..|++++.++. .+ ... ++.+.+.+ .+++++|+
T Consensus 94 ~~--------~~~gd~vl~~~Ptf~~Y~~~----a~~~g~~~~~v~~----~~-~~~d~~~~~~~~------~~~~~lv~ 150 (356)
T COG0079 94 AF--------VEPGDTVLIPEPTFSMYEIA----AQLAGAEVVKVPL----KE-FRLDLDAILAAI------RDKTKLVF 150 (356)
T ss_pred Hh--------hcCCCEEEEcCCChHHHHHH----HHhcCCeEEEecc----cc-cccCHHHHHHhh------hcCCCEEE
Confidence 87 58899999999999875444 4567999999954 33 333 78888888 45899999
Q ss_pred EeccCCCCcccccHHHHHHHHHHc--CCCEEEEecccccCCcc--ccccccCc-cEEEEcCcccCcCCCC--cEEEEEec
Q 012991 196 IDHITSMPCVVIPVRKLVKICRDE--GVDQVFVDAAHAMGSIK--IDVKEIGA-DFYVSNLHKWFFCPPS--VAFLYCRK 268 (452)
Q Consensus 196 ~~~~~n~tG~~~~l~~i~~l~~~~--~~~~~ivD~a~~~g~~~--~~~~~~~~-d~~~~s~~K~l~g~~G--~G~l~~~~ 268 (452)
+++|+||||..++.++|.+++... +. ++++|+|+.--..+ ........ -+++-|++| .+|..| +|+++.++
T Consensus 151 i~nPNNPTG~~~~~~~l~~l~~~~~~~~-~vVvDEAY~eF~~~~~~~l~~~~~nlivlRTfSK-a~gLAGlRlGy~ia~~ 228 (356)
T COG0079 151 LCNPNNPTGTLLPREELRALLEALPEGG-LVVIDEAYIEFSPESSLELLKYPPNLIVLRTFSK-AFGLAGLRVGYAIANP 228 (356)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCCCCc-EEEEeCchhhcCCchhhhhccCCCCEEEEEecHH-hhhcchhceeeccCCH
Confidence 999999999999999888888754 78 79999997532221 11111122 367779999 588888 89988898
Q ss_pred CccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cC
Q 012991 269 SILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LG 347 (452)
Q Consensus 269 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~ 347 (452)
++++. + ..... +.+.+..+..+..++++... -.+...+++.+.+.++.+.|++++ +. +.
T Consensus 229 ~~i~~-l-~~vr~-------------p~~v~~~a~~aa~aal~~~~----~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~ 288 (356)
T COG0079 229 ELIAA-L-NKVRP-------------PFNVSSPALAAAIAALRDAD----YLEESVERIREERERLYAALKALG-LFGVF 288 (356)
T ss_pred HHHHH-H-HHhcC-------------CCCCCHHHHHHHHHHcccHH----HHHHHHHHHHHHHHHHHHHHHhCC-CCeec
Confidence 88876 2 11100 01233334444444444432 356778888999999999999885 44 43
Q ss_pred CCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHH
Q 012991 348 SPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLE 427 (452)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~ 427 (452)
|.. .+|+++..+ +.. +..+.+.|.++ ||.++..... +..++++||+++ |++
T Consensus 289 -pS~--aNFvlv~~~------~~~-~~~l~~~L~~~-giivR~~~~~---------------~~~~~~lRitvg---t~e 339 (356)
T COG0079 289 -PSQ--ANFVLVRVP------DAE-AAALAEALLKK-GILVRDCSSV---------------GLLPGYLRITVG---TPE 339 (356)
T ss_pred -CCC--CcEEEEECC------Ccc-HHHHHHHHHHC-CEEEEeCCCC---------------CCCCCeEEEEeC---CHH
Confidence 333 789999886 223 55789999775 9999865431 245679999999 899
Q ss_pred HHHHHHHHHHHHHhc
Q 012991 428 DYEKFRDAVILLVEE 442 (452)
Q Consensus 428 di~~l~~~l~~~~~~ 442 (452)
+.++++++|+++++.
T Consensus 340 en~~ll~AL~~~~~~ 354 (356)
T COG0079 340 ENDRLLAALREVLKG 354 (356)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999998865
No 97
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.96 E-value=2.9e-26 Score=223.49 Aligned_cols=322 Identities=14% Similarity=0.130 Sum_probs=224.1
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccc
Q 012991 44 NNGSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFT 123 (452)
Q Consensus 44 ~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~ 123 (452)
.+-+.++.|+++++++.++...+ ....+..+++++.+++++|++ ++++|+|+|+|+.+++.++
T Consensus 18 t~~g~s~~~~~v~~a~~~~~~~~---------~~~~~~~~~~~~~~a~~~g~~---~~~~~~g~t~al~~al~al----- 80 (363)
T TIGR01437 18 TILGVSTVSDEVADAQKRGAQNY---------FEIKELVNKTGEYIANLLGVE---DAVIVSSASAGIAQSVAAV----- 80 (363)
T ss_pred ecCCCCCCCHHHHHHHHHHHhcC---------CCHHHHHHHHHHHHHHhhCCC---eEEEEcCHHHHHHHHHHHH-----
Confidence 33345568888999999986432 124567899999999999984 6899999999999999987
Q ss_pred cCCCCCCC---------------EEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccC
Q 012991 124 EGRFHRND---------------TVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKD 187 (452)
Q Consensus 124 ~~~~~~g~---------------~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~ 187 (452)
+++|| +|+++.+.|......+.......|+++++++.++ .+ ++++++++
T Consensus 81 ---~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~~------~~d~~~le~ai------ 145 (363)
T TIGR01437 81 ---ITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYAN------ECSAEQLEAAI------ 145 (363)
T ss_pred ---hcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCCC------CCCHHHHHHhc------
Confidence 35565 8998875554332223333456799999985422 23 89999999
Q ss_pred CCceEEEE-EeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEE
Q 012991 188 GKMIRLAI-IDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYC 266 (452)
Q Consensus 188 ~~~~~lv~-~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~ 266 (452)
+++|++++ +++++|++|.+.|+++|+++|++||+ ++++|++|+.... .+..+++|++++|+||++.||. .|+++.
T Consensus 146 ~~~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi-~vivD~a~~~~~~--~~~~~g~D~~~~S~~K~l~gp~-~G~l~~ 221 (363)
T TIGR01437 146 TEKTAAILYIKSHHCVQKSMLSVEDAAQVAQEHNL-PLIVDAAAEEDLQ--KYYRLGADLVIYSGAKAIEGPT-SGLVLG 221 (363)
T ss_pred ChhceEEEEEecCCCCcCCcCCHHHHHHHHHHcCC-eEEEECCCCCchH--HHHHcCCCEEEEeCCcccCCCc-eEEEEE
Confidence 67888765 56778899999999999999999999 7999999973211 1223478999999999999998 599888
Q ss_pred ecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 012991 267 RKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSL 346 (452)
Q Consensus 267 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~ 346 (452)
+++.++. + .+.. .+..... ..++ ..+.++.++++++.+. +.+.+.++. +.++++.+.|.+++|+.+
T Consensus 222 ~~~~i~~-~-~~~~---~~~~~~~---~~~~---~~~~gl~aAl~~~~~~--~~~~~~~~~-~~~~~l~~~L~~i~g~~~ 287 (363)
T TIGR01437 222 KKKYIEW-V-KLQS---KGIGRAM---KVGK---ENILGLTAALEQYLST--GKESGAEMV-AKLTPFIEALNTLKGVSA 287 (363)
T ss_pred cHHHHHH-H-Hhcc---CCCccee---ccCH---HHHHHHHHHHHHHHcc--CcccHHHHH-HHHHHHHHHHhcCCCeEE
Confidence 8777664 1 1211 1111111 1122 2356777888877754 555555544 456689999999888876
Q ss_pred CCCccc--c---cceEEEEcCCccccCChhhHHHHHHHHhhhcc--eEeeecccCCCCCCCCCCCCCCCCCCccceEEec
Q 012991 347 GSPPEI--C---AAMVMVGLPSRLRVMGEDDALRLRGHLRVRFG--VEVPIHYQAPKDDGQPQAGARDKDGIITGYARIS 419 (452)
Q Consensus 347 ~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g--I~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis 419 (452)
..+... . ...+.|... ..+.+..++.+.|.+ .+ |.++... ...+.+|++
T Consensus 288 ~~~~~~~~~~~~~~~v~~~~~-----~~g~~~~~l~~~L~~-~~~~I~~r~~~------------------~~~~~~~l~ 343 (363)
T TIGR01437 288 SIVQDEAGRDIARAEIRFDES-----ELGMTAADVVQALRQ-GEPAIYTRGYK------------------ANEGIIEID 343 (363)
T ss_pred EEecCCCCCcCceEEEEEecc-----CCCCCHHHHHHHHhc-CCCCEEEeeee------------------ecCCeEEEE
Confidence 532211 1 122333321 025678899999975 36 6665421 235689999
Q ss_pred ccccCCHHHHHHHHHHHHHHH
Q 012991 420 HQVYNTLEDYEKFRDAVILLV 440 (452)
Q Consensus 420 ~~~~~t~~di~~l~~~l~~~~ 440 (452)
+.. ++++|+++++++|++++
T Consensus 344 ~~~-~~~~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 344 PRS-VTGGQLDIIVERIREIV 363 (363)
T ss_pred eec-CCHHHHHHHHHHHHHhC
Confidence 876 46999999999998863
No 98
>PLN02452 phosphoserine transaminase
Probab=99.96 E-value=1.2e-26 Score=224.07 Aligned_cols=344 Identities=15% Similarity=0.092 Sum_probs=247.3
Q ss_pred eEEeccCCCCCCcHHHHHHHHHHHHHHhcCCc-----hhhhhhhhHHHHHHHHHHHhHhCCCCCCcEE-EecChhHHHHH
Q 012991 40 VARINNGSFGSCPKSVLADQQKWQLKFLQQPD-----DFYFNSLRKGILESRAAVKDLINADDVGEIS-LVDNATTAAAI 113 (452)
Q Consensus 40 ~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~-~t~g~t~a~~~ 113 (452)
+++|. +++...|++|++++..-+.++.+.+. ++.+..+.++++++++.+.++++.++..+++ +..|||.++..
T Consensus 8 ~~~f~-pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea 86 (365)
T PLN02452 8 VFNFS-AGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAA 86 (365)
T ss_pred eEeee-CCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHH
Confidence 44554 55777888899999887655443322 2345778899999999999999996333554 55789999999
Q ss_pred HHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH--HHHHHHHHhccccCCCce
Q 012991 114 VLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI--INEFKKGIEKGKKDGKMI 191 (452)
Q Consensus 114 ~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~--~~~l~~~i~~~~~~~~~~ 191 (452)
++.++ +.+|+++++......+ ..|...|++.|...+....+ ......+ ++++ +. .+++
T Consensus 87 ~~~nl--------~~~~~~~l~~~~G~fg--~r~~~~a~~~g~~~~~~~~~--~~~~~~~~~~~~~----~~----~~~~ 146 (365)
T PLN02452 87 IPLNL--------CKPGDKADFVVTGSWS--KKAAKEAKKYCKTNVIASGK--DEKYTKIPSVSEW----EL----TPDA 146 (365)
T ss_pred HHHhc--------CCCCCeEEEEECCHHH--HHHHHHHHHhCCCcEEEecC--CCCCCCCCChHHc----CC----CCCC
Confidence 99987 5788888876655544 33444478888644433211 1111111 3332 21 4578
Q ss_pred EEEEEeccCCCCccc-ccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCc
Q 012991 192 RLAIIDHITSMPCVV-IPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSI 270 (452)
Q Consensus 192 ~lv~~~~~~n~tG~~-~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~ 270 (452)
+.|.++|.+++||+. .|++++. ++ ++++|+++++|+.++|+.++++|+ +|.||+ +||+|+|++++++++
T Consensus 147 ~~v~~~hnETstGv~~~~~~~i~------~~-~lvVDa~Ss~g~~pidv~~~~v~~--~saqK~-lGP~Gl~~v~vr~~~ 216 (365)
T PLN02452 147 KFVHICANETIHGVEFKDYPDVG------NV-PLVADMSSNFLSKPVDVSKYGVIY--AGAQKN-VGPSGVTIVIIRKDL 216 (365)
T ss_pred cEEEECCCCCCCcEecCcccccC------CC-eEEEECCccccCcccCHHHcCEEE--Eecccc-cCCCCeEEEEEcHHH
Confidence 999999999999995 7887774 38 799999999999999999887755 699996 589999999999999
Q ss_pred cccCCCCCceeccCCCCc-ccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCC-CcCC
Q 012991 271 LSSDMHHPVVSHEFGNGL-PIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGT-SLGS 348 (452)
Q Consensus 271 ~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~ 348 (452)
+++ . .+.......... ..+..+.+||++..++++.++++++.+ ++|++++.++.+++++++++.|++.+|+ ....
T Consensus 217 l~~-~-~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~-~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~ 293 (365)
T PLN02452 217 IGN-A-RPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLA-QGGLKAMEKRNIRKADLLYDAIDESNGFYVCPV 293 (365)
T ss_pred Hhh-c-ccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCC
Confidence 875 2 111100000000 012234579999999999999999986 3589999999999999999999987776 2111
Q ss_pred C-cccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHH
Q 012991 349 P-PEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLE 427 (452)
Q Consensus 349 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~ 427 (452)
+ .......+.|.+++ .....++.+.+.++ |+..-.++... +.+|+|+....+.+
T Consensus 294 ~~~~rs~~~vsF~~~~------~~~~~~f~~~~~~~-g~~~~~G~r~~------------------gg~R~s~yna~~~~ 348 (365)
T PLN02452 294 EKSVRSLMNVPFTLGG------SELEAEFVKEAAKA-GMVQLKGHRSV------------------GGMRASIYNAMPLA 348 (365)
T ss_pred ChHHhCCeEEEEEcCC------chhHHHHHHHHHHC-CCcccCCcccc------------------CceEEECcCCCCHH
Confidence 1 22334578888872 23567888998765 99986666531 23999999889999
Q ss_pred HHHHHHHHHHHHHhc
Q 012991 428 DYEKFRDAVILLVEE 442 (452)
Q Consensus 428 di~~l~~~l~~~~~~ 442 (452)
+|++|+++|++..++
T Consensus 349 ~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 349 GVEKLVAFMKDFQAK 363 (365)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998764
No 99
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.95 E-value=2.8e-26 Score=227.67 Aligned_cols=347 Identities=14% Similarity=0.130 Sum_probs=231.6
Q ss_pred CCCeEEeccCCCC-----CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCC-----CCCcEEEecC
Q 012991 37 QHGVARINNGSFG-----SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINAD-----DVGEISLVDN 106 (452)
Q Consensus 37 ~~~~~~l~~~~~~-----~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-----~~~~i~~t~g 106 (452)
+.+++.|+.+.++ +.++.+.+++.+.+... ....|.......++|+.++++++.. +++++++|+|
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~-----~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G 104 (403)
T TIGR01265 30 EKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSG-----KFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSG 104 (403)
T ss_pred CCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcC-----CCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecC
Confidence 5679999998764 56677888888765421 1112334556788999999999841 3579999999
Q ss_pred hhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccc
Q 012991 107 ATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGK 185 (452)
Q Consensus 107 ~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~ 185 (452)
+|+|+.+++.++ ..+||+|++++|+|...... +...|.+++.+++. .++.+.+ ++.+++.+
T Consensus 105 ~t~al~~~~~~l--------~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~~~~~--~~~~~~~d~~~l~~~~---- 166 (403)
T TIGR01265 105 CSQAIEICIEAL--------ANPGANILVPRPGFPLYDTR----AAFSGLEVRLYDLL--PEKDWEIDLDGLEALA---- 166 (403)
T ss_pred hHHHHHHHHHHh--------CCCCCEEEEeCCCchhHHHH----HHHcCCEEEEecCC--cccCCccCHHHHHHHh----
Confidence 999999999987 47899999999999765333 45679999988652 1223334 88998888
Q ss_pred cCCCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCcc----cccccc---CccEEEEcCcccC
Q 012991 186 KDGKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSIK----IDVKEI---GADFYVSNLHKWF 255 (452)
Q Consensus 186 ~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~~----~~~~~~---~~d~~~~s~~K~l 255 (452)
.++++++++++++||||.+++ +++|.++|+++|+ ++|+|++++..... ..+..+ ..-+++.|++|.
T Consensus 167 --~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~-~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~- 242 (403)
T TIGR01265 167 --DEKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGI-PIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKR- 242 (403)
T ss_pred --CcCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCC-EEEEEccccccccCCCCccchhhhccCCcEEEEeecccc-
Confidence 567899999999999999987 7788999999999 79999997643211 111111 123677899995
Q ss_pred cCCCC--cEEEEEec--CccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHH
Q 012991 256 FCPPS--VAFLYCRK--SILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQA 331 (452)
Q Consensus 256 ~g~~G--~G~l~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~ 331 (452)
++.+| +|++++.+ +.+...+...... + .. ....++...+.++..+++.... .-+++.++++++.+
T Consensus 243 ~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~--~------~~-~~~~~~~~~q~~~~~~l~~~~~--~~~~~~~~~~~~~~ 311 (403)
T TIGR01265 243 WVVPGWRLGWIIIHDPHGIFRDTVLQGLKN--L------LQ-RILGPATIVQGALPDILENTPQ--EFFDGKISVLKSNA 311 (403)
T ss_pred cCCCcceEEEEEEeCchhhhHHHHHHHHHH--H------hh-hhcCCChHHHHHHHHHHHhChH--HHHHHHHHHHHHHH
Confidence 66666 88888742 2221100000000 0 00 0012233333334334432111 13566677788888
Q ss_pred HHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCC
Q 012991 332 LKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGI 411 (452)
Q Consensus 332 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~ 411 (452)
+.+.+.|...+++.+..|.+ ++++|+.++.... .+..+..++.+.|.++.||.+.++..+ .
T Consensus 312 ~~l~~~L~~~~~~~~~~p~~--g~f~~~~~~~~~~-~~~~~~~~~~~~l~~~~gv~v~pg~~f----------------~ 372 (403)
T TIGR01265 312 ELCYEELKDIPGLVCPKPEG--AMYLMVKLELELF-PEIKDDVDFCEKLVREESVICLPGSAF----------------G 372 (403)
T ss_pred HHHHHHHhcCCCceecCCCc--eeEEEEecccccc-CCCCCHHHHHHHHHHhCCEEEeCcccc----------------C
Confidence 88999998776666555544 7899998863100 001256678888655579999776554 1
Q ss_pred ccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 412 ITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 412 ~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
.++++|++++. ..+.++..+++|++++++
T Consensus 373 ~~~~iRis~~~--~~~~l~~~l~~l~~~~~~ 401 (403)
T TIGR01265 373 LPNWVRITITV--PESMLEEACSRIKEFCER 401 (403)
T ss_pred CCCeEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 25799999984 577899999999887753
No 100
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=1.6e-26 Score=225.90 Aligned_cols=321 Identities=16% Similarity=0.139 Sum_probs=222.7
Q ss_pred CCeEEeccCCCCC-CcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHH
Q 012991 38 HGVARINNGSFGS-CPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQ 116 (452)
Q Consensus 38 ~~~~~l~~~~~~~-~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~ 116 (452)
..+++|+.+.... .|+.+.+++.+.+.... . .|. .....++|++++++++++ +++|++|+|+++++.+++.
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~----~--~y~-~~~~~~lr~aia~~~~~~-~~~I~it~G~~~al~~~~~ 95 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIRAALGDDL----R--LYP-DPNADALRQAIAAYYGLD-PEQVFVGNGSDEVLAHAFL 95 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHhhhhh----h--cCC-CCcHHHHHHHHHHHhCCC-HHHEEEcCCHHHHHHHHHH
Confidence 5688999887663 46778999887654311 1 121 223478999999999996 7999999999999999999
Q ss_pred HhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEE
Q 012991 117 QIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAI 195 (452)
Q Consensus 117 ~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~ 195 (452)
++ +++||+|++++|.|+.. ..+ ++..|++++.+++ ++++.+ ++++++ .+++|+
T Consensus 96 ~l--------~~~gd~vlv~~P~y~~~-~~~---~~~~g~~~~~v~~----~~~~~~d~~~l~~----------~~~~v~ 149 (353)
T PRK05387 96 AF--------FNHDRPLLFPDITYSFY-PVY---AGLYGIPYEEIPL----DDDFSIDVEDYLR----------PNGGII 149 (353)
T ss_pred Hh--------cCCCCEEEEeCCCHHHH-HHH---HHHcCCEEEEeec----CCCCCCCHHHHHh----------cCCEEE
Confidence 87 58999999999999654 333 4556999999854 333333 666542 246889
Q ss_pred EeccCCCCcccccHHHHHHHHHHc-CCCEEEEecccccCC-c-ccc-ccccCccEEEEcCcccCcCCCC--cEEEEEecC
Q 012991 196 IDHITSMPCVVIPVRKLVKICRDE-GVDQVFVDAAHAMGS-I-KID-VKEIGADFYVSNLHKWFFCPPS--VAFLYCRKS 269 (452)
Q Consensus 196 ~~~~~n~tG~~~~l~~i~~l~~~~-~~~~~ivD~a~~~g~-~-~~~-~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~ 269 (452)
+++|+||||.++|.+++.++++.+ ++ ++|+|+++..-. . ... ....+..+++.|++|. +|.+| +|+++.+++
T Consensus 150 ~~~P~NPtG~~~~~~~~~~l~~~~~~~-~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~~GlR~G~~~~~~~ 227 (353)
T PRK05387 150 FPNPNAPTGIALPLAEIERILAANPDS-VVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKS-RSLAGLRVGFAIGHPE 227 (353)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCCCc-EEEEeCcccccCCcchHHHHhhCCCEEEEEehhHh-hcchhhhceeeecCHH
Confidence 999999999999999999999876 89 799999874211 0 011 1112346888899996 66555 899988877
Q ss_pred ccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCC
Q 012991 270 ILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSP 349 (452)
Q Consensus 270 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 349 (452)
+++. + ..... .....+.+...+.++..+++.. +..++.+++++++++.+.+.|.+. ++.+. +
T Consensus 228 ~~~~-l-~~~~~----------~~~~~~~~~~~q~~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~ 289 (353)
T PRK05387 228 LIEA-L-NRVKN----------SFNSYPLDRLAQAGAIAAIEDE----AYFEETRAKVIATRERLVEELEAL-GFEVL-P 289 (353)
T ss_pred HHHH-H-HHhhc----------cCCCCCcCHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHHHHHHHC-CCeEC-C
Confidence 7664 1 11100 0000122333333333343321 135677888888999999999887 76653 3
Q ss_pred cccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHH
Q 012991 350 PEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDY 429 (452)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di 429 (452)
+. ++++++.++ +.+..++.+.|.+ .||.++....+ ...+++|++++ +.+++
T Consensus 290 ~~--~~~~~~~~~-------~~~~~~~~~~l~~-~gi~v~~~~~~----------------~~~~~iRis~~---~~~~~ 340 (353)
T PRK05387 290 SK--ANFVFARHP-------SHDAAELAAKLRE-RGIIVRHFNKP----------------RIDQFLRITIG---TDEEM 340 (353)
T ss_pred Cc--CcEEEEECC-------CCCHHHHHHHHHH-CCEEEEECCCC----------------CCCCeEEEEeC---CHHHH
Confidence 33 668888775 3467789999966 59999642211 23579999997 67999
Q ss_pred HHHHHHHHHHHh
Q 012991 430 EKFRDAVILLVE 441 (452)
Q Consensus 430 ~~l~~~l~~~~~ 441 (452)
++++++|++++.
T Consensus 341 ~~~~~~L~~~~~ 352 (353)
T PRK05387 341 EALVDALKEILA 352 (353)
T ss_pred HHHHHHHHHHhh
Confidence 999999998763
No 101
>PLN02187 rooty/superroot1
Probab=99.95 E-value=5.1e-26 Score=228.30 Aligned_cols=346 Identities=12% Similarity=0.075 Sum_probs=230.6
Q ss_pred CCCeEEeccCCCC-----CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhC------CCCCCcEEEec
Q 012991 37 QHGVARINNGSFG-----SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLIN------ADDVGEISLVD 105 (452)
Q Consensus 37 ~~~~~~l~~~~~~-----~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~~i~~t~ 105 (452)
.+++++|+.|.+. ..|+.+.+++.+.+.. +. .+.|....+..++|++++++++ ++ +++|++|+
T Consensus 65 ~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~----~~-~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~-~~~I~it~ 138 (462)
T PLN02187 65 NKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRS----GK-GNSYGPGAGILPARRAVADYMNRDLPHKLT-PEDIFLTA 138 (462)
T ss_pred CCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhC----CC-CCCCCCCCChHHHHHHHHHHHHHhcCCCCC-cccEEEeC
Confidence 5679999998654 2445677777766532 11 1234455667889999999884 43 78999999
Q ss_pred ChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhcc
Q 012991 106 NATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKG 184 (452)
Q Consensus 106 g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~ 184 (452)
|+++++.+++.++ +++||+|++++|.|+.+... +...|.+++.+++. .+++..+ +++|++++
T Consensus 139 G~~~al~~~~~~l--------~~pGd~Vlv~~P~y~~y~~~----~~~~g~~~~~~~l~--~~~~~~~d~~~l~~~~--- 201 (462)
T PLN02187 139 GCNQGIEIVFESL--------ARPNANILLPRPGFPHYDAR----AAYSGLEVRKFDLL--PEKEWEIDLEGIEAIA--- 201 (462)
T ss_pred CHHHHHHHHHHHh--------cCCCCEEEEeCCCCccHHHH----HHHcCCEEEEEeCc--cccCCccCHHHHHHhc---
Confidence 9999999999987 58999999999999975433 45579999999762 1223344 89999888
Q ss_pred ccCCCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCc---c-cccccc---CccEEEEcCccc
Q 012991 185 KKDGKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSI---K-IDVKEI---GADFYVSNLHKW 254 (452)
Q Consensus 185 ~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~---~-~~~~~~---~~d~~~~s~~K~ 254 (452)
.++++++++++|+||||.+++ +++|+++|++||+ ++|+|++++.... + ..+... ..-+++.|++|.
T Consensus 202 ---~~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i-~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~ 277 (462)
T PLN02187 202 ---DENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGI-MVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKG 277 (462)
T ss_pred ---CCCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCC-EEEEeccccccccCCCCceeHHHhccCCcEEEEecchhh
Confidence 567899999999999999998 6678889999999 7999999864221 1 111111 124677899995
Q ss_pred CcCCCC--cEEEEEe-cCcc----ccCCCCCceeccCCCCcccccccccccCccccccHHHHHHH-HHHhhcCHHHHHHH
Q 012991 255 FFCPPS--VAFLYCR-KSIL----SSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTF-VSRFEGGIDGIMQR 326 (452)
Q Consensus 255 l~g~~G--~G~l~~~-~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~~~g~~~~~~~ 326 (452)
++.+| +|++++. ++.+ .. + ...... +. ....++...+.++.++++. ... -++..++.
T Consensus 278 -f~~pGlRiG~~v~~~p~~~~~~~~~-~-~~~~~~-~~--------~~~~~s~~~Q~a~~~~L~~~~~~---~l~~~~~~ 342 (462)
T PLN02187 278 -WVVPGWKIGWIALNDPEGVFETTKV-L-QSIKQN-LD--------VTPDPATIIQAALPAILEKADKN---FFAKKNKI 342 (462)
T ss_pred -cCCccceeEEEEecCchhHHHHHHH-H-HHHHHh-cc--------ccCCCCHHHHHHHHHHHhcCcHH---HHHHHHHH
Confidence 77777 7888874 3211 11 0 000000 00 0012233344444444431 111 35667778
Q ss_pred HHHHHHHHHHHHHHHcCCCcC-CCcccccceEEEEcCCccccCChh-hHHHHHHHHhhhcceEeeecccCCCCCCCCCCC
Q 012991 327 NHEQALKMARMLANAWGTSLG-SPPEICAAMVMVGLPSRLRVMGED-DALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAG 404 (452)
Q Consensus 327 ~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~ 404 (452)
++++++.+.+.|.++++.... .|.+ ++++|+.++.... .+. +..+++..+.++.||.+.++..+
T Consensus 343 l~~~r~~l~~~L~~~~~~~~~~~P~g--g~fl~~~l~~~~~--~~~~~~~~~~~~ll~~~gV~v~pG~~f---------- 408 (462)
T PLN02187 343 LKHNVDLVCDRLKDIPCVVCPKKPES--CTYLLTKLELSLM--DNIKDDIDFCVKLAREENLVFLPGDAL---------- 408 (462)
T ss_pred HHHHHHHHHHHHhhCCCCcCCCCCCE--eEEEEeecChhhC--CCCCCHHHHHHHHHhhCCEEEECcccc----------
Confidence 888899999999887443322 3333 6788887642100 112 34456555545569999766554
Q ss_pred CCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhccccc
Q 012991 405 ARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEEGQVC 446 (452)
Q Consensus 405 ~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~~~~~ 446 (452)
...+++||+++. .++.++..+++|+++++.-.+.
T Consensus 409 ------g~~~~iRis~~~--~~e~l~~al~rL~~~l~~~~~~ 442 (462)
T PLN02187 409 ------GLKNWMRITIGV--EAHMLEDALERLKGFCTRHAKK 442 (462)
T ss_pred ------CCCCeEEEEeCC--CHHHHHHHHHHHHHHHHHhhhc
Confidence 225799999985 6788999999999988755443
No 102
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.95 E-value=2.9e-26 Score=226.16 Aligned_cols=334 Identities=13% Similarity=0.087 Sum_probs=222.5
Q ss_pred CCeEEeccCCCCC-CcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh------CCCCCCcEEEecChhHH
Q 012991 38 HGVARINNGSFGS-CPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI------NADDVGEISLVDNATTA 110 (452)
Q Consensus 38 ~~~~~l~~~~~~~-~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~~i~~t~g~t~a 110 (452)
++++.|+.+.+.. .++.+.+++...... ....|....+..++|+++++++ +++ +++|++|+|+++|
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~------~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~-~~~i~it~G~~~a 101 (384)
T PRK06348 29 PDIIDLSLGDPDLITDESIINAAFEDAKK------GHTRYTDSGGDVELIEEIIKYYSKNYDLSFK-RNEIMATVGACHG 101 (384)
T ss_pred CCcEEcCCCCCCCCCCHHHHHHHHHHHhc------CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC-hhhEEEcCChHHH
Confidence 4678888777663 344455544332211 1122334445566778888776 343 7899999999999
Q ss_pred HHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCC
Q 012991 111 AAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGK 189 (452)
Q Consensus 111 ~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~ 189 (452)
+.+++.++ +++||+|++++|.|......+.. .|.+++.+++. .++...+ ++++++.+ .+
T Consensus 102 l~~~~~~~--------~~~gd~vlv~~p~y~~~~~~~~~----~g~~~~~~~~~--~~~~~~~d~~~l~~~~------~~ 161 (384)
T PRK06348 102 MYLALQSI--------LDPGDEVIIHEPYFTPYKDQIEM----VGGKPIILETY--EEDGFQINVKKLEALI------TS 161 (384)
T ss_pred HHHHHHHh--------cCCCCEEEEeCCCCcchHHHHHH----cCCEEEEecCC--cCcCCcCCHHHHHHhh------Cc
Confidence 99999987 58999999999999887666543 58888887541 1122234 89999888 46
Q ss_pred ceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCcc---cc---ccc-cCccEEEEcCcccCcCCC
Q 012991 190 MIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSIK---ID---VKE-IGADFYVSNLHKWFFCPP 259 (452)
Q Consensus 190 ~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~~---~~---~~~-~~~d~~~~s~~K~l~g~~ 259 (452)
++++|++++|+||||.+++ +++|.++|+++++ ++|+|++++..... .. +.. .+..+++.|++|. +|.+
T Consensus 162 ~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~-~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~-~~l~ 239 (384)
T PRK06348 162 KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDL-FIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKD-FAMT 239 (384)
T ss_pred CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCe-EEEEecccccceeCCCccchhhcCCCcCcEEEEecchhc-cCCc
Confidence 7899999999999999997 5677888999999 79999998643211 11 111 1235778899996 5655
Q ss_pred C--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Q 012991 260 S--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARM 337 (452)
Q Consensus 260 G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~ 337 (452)
| +|+++++++++.. + .... .....+.+...+.++..++....+ -.+.+++.++++++.+.+.
T Consensus 240 GlRiG~~v~~~~~~~~-~-~~~~-----------~~~~~~~~~~~q~~~~~~l~~~~~---~~~~~~~~~~~r~~~~~~~ 303 (384)
T PRK06348 240 GWRIGYVIAPDYIIET-A-KIIN-----------EGICFSAPTISQRAAIYALKHRDT---IVPLIKEEFQKRLEYAYKR 303 (384)
T ss_pred cccceeeecCHHHHHH-H-HHHH-----------HhccCCCCHHHHHHHHHHHhCcHH---HHHHHHHHHHHHHHHHHHH
Confidence 5 8999888776654 1 1110 000012223333333333332222 2456677778888888898
Q ss_pred HHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEE
Q 012991 338 LANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYAR 417 (452)
Q Consensus 338 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iR 417 (452)
|.+++++++..+.+ +.++|+.++. .+.+..++++.|.+++||.+.++..+.. ...+++|
T Consensus 304 L~~~~~~~~~~p~g--g~~~~~~~~~-----~~~~~~~l~~~l~~~~gv~v~pg~~f~~--------------~~~~~iR 362 (384)
T PRK06348 304 IESIPNLSLHPPKG--SIYAFINIKK-----TGLSSVEFCEKLLKEAHVLVIPGKAFGE--------------SGEGYIR 362 (384)
T ss_pred HhcCCCceeccCCe--eEEEEEeccc-----CCCCHHHHHHHHHHhCCEEEcCchhhcc--------------CCCCeEE
Confidence 98776665554443 6677888762 1356778888876667999977665522 2357999
Q ss_pred ecccccCCHHHHHHHHHHHHHH
Q 012991 418 ISHQVYNTLEDYEKFRDAVILL 439 (452)
Q Consensus 418 is~~~~~t~~di~~l~~~l~~~ 439 (452)
+|++ .+.++++..++.|+++
T Consensus 363 i~~~--~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 363 LACT--VGIEVLEEAFNRIEKM 382 (384)
T ss_pred EEec--CCHHHHHHHHHHHHhh
Confidence 9996 3788899888888754
No 103
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.95 E-value=6.9e-26 Score=227.65 Aligned_cols=348 Identities=15% Similarity=0.136 Sum_probs=230.8
Q ss_pred HHHHHHhcCCchh-hhhhhhHHHHHHHHHHHhHhCC------------CCCCcEEEecChhHHHHHHHHHhhcccccCC-
Q 012991 61 KWQLKFLQQPDDF-YFNSLRKGILESRAAVKDLINA------------DDVGEISLVDNATTAAAIVLQQIGRGFTEGR- 126 (452)
Q Consensus 61 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~~------------~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~- 126 (452)
.....++.+...+ .+....++.+++.++++++++. ++....+||+|||+|+..++.+.........
T Consensus 109 ~l~~~lN~n~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~ 188 (522)
T TIGR03799 109 KLMVALNQNLVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADG 188 (522)
T ss_pred HHHHHhcCCcceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccc
Confidence 3444444444332 3456678889999999999852 1123468999999999988876543221000
Q ss_pred -----------------CCCCCEEEEeCCcchhHHHHHHHHHHhcCc---EEEEEeCCCCCCChHHH-HHHHHHHHhccc
Q 012991 127 -----------------FHRNDTVLMLHCAFQAVKKSIQAYVTRAGG---SVVEVQLPFPLASEEEI-INEFKKGIEKGK 185 (452)
Q Consensus 127 -----------------~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~---~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~ 185 (452)
..++..|++++.+|+|+.++... .|. +++.+ |.++++.+ +++|+++|++..
T Consensus 189 ~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~----lglg~~~v~~v----p~d~~g~~d~~~L~~~i~~~~ 260 (522)
T TIGR03799 189 DFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADV----LGIGRDNLIAI----KTDANNRIDVDALRDKCAELA 260 (522)
T ss_pred cccccccccchhhhhhccCCceEEEECCCchHHHHHHHHH----cCCCcccEEEE----EeCCCCcCCHHHHHHHHHHHH
Confidence 01245788999999998777554 466 78888 44566777 999999997543
Q ss_pred cCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCcccc-----cccc-CccEEEEcCcccCcCCC
Q 012991 186 KDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKID-----VKEI-GADFYVSNLHKWFFCPP 259 (452)
Q Consensus 186 ~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~-----~~~~-~~d~~~~s~~K~l~g~~ 259 (452)
..+.++-+|+.+..++.+|.+.|+++|+++|+++|+ ++|||+|++.+....+ +..+ ++|++++|+|||+++|.
T Consensus 261 ~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~-~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~ 339 (522)
T TIGR03799 261 EQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGC-HFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPM 339 (522)
T ss_pred HCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCC-eEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCc
Confidence 334456666667788899999999999999999999 5999999987765444 3433 68999999999999999
Q ss_pred CcEEEEEecCcc-ccCC--CCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 012991 260 SVAFLYCRKSIL-SSDM--HHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMAR 336 (452)
Q Consensus 260 G~G~l~~~~~~~-~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~ 336 (452)
|+|++++++... +. + ..+|... .+..........++.+..+ +.++.+++++... |++.+.++..++++++.+
T Consensus 340 g~G~llvr~~~~~~~-~~~~~~Yl~~-~~~~d~~~~~legsR~~~a-l~lw~aL~~lG~~--G~~~ii~~~~~la~~l~~ 414 (522)
T TIGR03799 340 GAGMVLFKDPALMSA-IEHHAEYILR-KGSKDLGSHTLEGSRPGMA-MLVYAGLHIIGRK--GYELLIDQSIEKAKYFAD 414 (522)
T ss_pred ccEEEEEeCHHHHHH-hccCcchhcC-CCCCccccceeecCcchHH-HHHHHHHHHHhHH--HHHHHHHHHHHHHHHHHH
Confidence 999999986433 22 1 1122211 0110001111224455443 4588889988865 999999999999999999
Q ss_pred HHHHHcCCCcCCCcccccceEEEEcC-Ccccc-------------CChhh--HHHHHHHHhhhcceEeeeccc-CCCCCC
Q 012991 337 MLANAWGTSLGSPPEICAAMVMVGLP-SRLRV-------------MGEDD--ALRLRGHLRVRFGVEVPIHYQ-APKDDG 399 (452)
Q Consensus 337 ~L~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------------~~~~~--~~~l~~~L~~~~gI~v~~~~~-~~~~~~ 399 (452)
.|.+.++++++.++. .++++|++. ..... ....+ ...+.+.+++. |........ .+..
T Consensus 415 ~L~~~~~~el~~~p~--l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~-G~~~vs~t~l~~~~-- 489 (522)
T TIGR03799 415 LIQQQPDFELVTEPE--LCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREA-GKSFVSRTRLTPAQ-- 489 (522)
T ss_pred HHhhCCCeEEecCCC--ccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhc-CCEEEEEEEecccc--
Confidence 999999999888765 678888852 11100 00011 13566666665 555422221 1000
Q ss_pred CCCCCCCCCCCCccceEEecc-cccCCHHHHHHHHHH
Q 012991 400 QPQAGARDKDGIITGYARISH-QVYNTLEDYEKFRDA 435 (452)
Q Consensus 400 ~~~~~~~~~~~~~~~~iRis~-~~~~t~~di~~l~~~ 435 (452)
..+.....+|+++ ++.+|.+||+.+++.
T Consensus 490 --------~~g~~~~~lR~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 490 --------YDHQPTVVFRVVLANPLTTHEILQDILDE 518 (522)
T ss_pred --------cCCCCcEEEEEEecCCCCCHHHHHHHHHH
Confidence 0012235799998 566788889988764
No 104
>PRK08912 hypothetical protein; Provisional
Probab=99.95 E-value=4.2e-26 Score=225.45 Aligned_cols=340 Identities=15% Similarity=0.144 Sum_probs=228.7
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh----CCC-CCC-cEEEecChhHH
Q 012991 38 HGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI----NAD-DVG-EISLVDNATTA 110 (452)
Q Consensus 38 ~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~-~~~-~i~~t~g~t~a 110 (452)
..++.|+.+.+. +.|..+.+++.+.+.. .. ..|....+..++|+++++++ |.+ +++ +|++|+|++++
T Consensus 26 ~~~i~l~~g~p~~~~p~~~~~~~~~~~~~----~~--~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~a 99 (387)
T PRK08912 26 HGAINLGQGFPDDPGPEDVRRAAADALLD----GS--NQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEA 99 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhc----CC--CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHH
Confidence 568899887665 3466677776664431 11 12333445566777777765 432 356 89999999999
Q ss_pred HHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCC
Q 012991 111 AAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGK 189 (452)
Q Consensus 111 ~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~ 189 (452)
+.+++.++ +++||+|++++|.|+..... ++..|.+++.++++ .+++.+ .+.+++.+ ..
T Consensus 100 l~~~~~~~--------~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~~~~~---~~~~~~~~~~l~~~~------~~ 158 (387)
T PRK08912 100 LAAALLAL--------VEPGDEVVLFQPLYDAYLPL----IRRAGGVPRLVRLE---PPHWRLPRAALAAAF------SP 158 (387)
T ss_pred HHHHHHHh--------cCCCCEEEEeCCCchhhHHH----HHHcCCEEEEEecC---cccCcCCHHHHHHHh------Cc
Confidence 99998876 58899999999999876544 45569999998652 112334 78899888 56
Q ss_pred ceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCc------cc-cccc-cCccEEEEcCcccCcCC
Q 012991 190 MIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSI------KI-DVKE-IGADFYVSNLHKWFFCP 258 (452)
Q Consensus 190 ~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~------~~-~~~~-~~~d~~~~s~~K~l~g~ 258 (452)
++++|++++++||||.+++ +++|.++|++|++ ++|+|++++.... ++ .+.. .+.++++.|++|. +|.
T Consensus 159 ~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~-~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~g~ 236 (387)
T PRK08912 159 RTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDA-VAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKI-FSL 236 (387)
T ss_pred cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCe-EEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhh-ccC
Confidence 8899999999999999998 5568899999999 7999999753211 11 1111 1356889999995 777
Q ss_pred CC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 012991 259 PS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMAR 336 (452)
Q Consensus 259 ~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~ 336 (452)
+| +|++++++++++. + ..... ....+.+...+.++..++....+ -.+.+++++++.++.+.+
T Consensus 237 ~GlRiG~~~~~~~~~~~-l-~~~~~-----------~~~~~~~~~~q~~~~~~l~~~~~---~~~~~~~~~~~~~~~l~~ 300 (387)
T PRK08912 237 TGWKVGFVCAAPPLLRV-L-AKAHQ-----------FLTFTTPPNLQAAVAYGLGKPDD---YFEGMRADLARSRDRLAA 300 (387)
T ss_pred cCceeEEEecCHHHHHH-H-HHHHh-----------hccccCChHHHHHHHHHHhCCHH---HHHHHHHHHHHHHHHHHH
Confidence 77 8999998877664 1 11100 00011111122222223321111 246677888899999999
Q ss_pred HHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceE
Q 012991 337 MLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYA 416 (452)
Q Consensus 337 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i 416 (452)
.|.+. ++.+..+.+ +.++|+.++... ...+..++++.|.+++||.+.++..+... ....+++
T Consensus 301 ~L~~~-g~~~~~~~g--~~~l~~~l~~~~---~~~~~~~~~~~l~~~~gV~v~pg~~f~~~------------~~~~~~i 362 (387)
T PRK08912 301 GLRRI-GFPVLPSQG--TYFLTVDLAPLG---LAEDDVAFCRRLVEEAGVAAIPVSAFYEE------------DPVTSVV 362 (387)
T ss_pred HHHhC-CCcccCCCc--ceEEEecccccC---CCCCHHHHHHHHHhcCCEEEecchhhCCC------------CCCCCEE
Confidence 99887 777665543 677888876210 02456788888765569999776554211 1235799
Q ss_pred EecccccCCHHHHHHHHHHHHHHHhc
Q 012991 417 RISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 417 Ris~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
|++++. ..++++..++.|++.+.+
T Consensus 363 Rl~~~~--~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 363 RFCFAK--RDATLDEAVERLAAARRR 386 (387)
T ss_pred EEEEeC--CHHHHHHHHHHHHHHHhc
Confidence 999996 578899999999887653
No 105
>PLN02483 serine palmitoyltransferase
Probab=99.95 E-value=2.2e-25 Score=224.71 Aligned_cols=346 Identities=11% Similarity=0.127 Sum_probs=225.5
Q ss_pred CCCeEEeccCCCC---CCcHHHHHHHHHHHHHHhcCC-chhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHH
Q 012991 37 QHGVARINNGSFG---SCPKSVLADQQKWQLKFLQQP-DDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAA 112 (452)
Q Consensus 37 ~~~~~~l~~~~~~---~~p~~v~e~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~ 112 (452)
++.+++|....+- .....+.+++.+.+..+.... ++...++.....+++++.+|+++|.+ +.+++++| ..++.
T Consensus 99 ~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~~--~ai~~~~G-~~an~ 175 (489)
T PLN02483 99 TRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGKP--AAIVFGMG-YATNS 175 (489)
T ss_pred CceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCCC--cEEEECCH-HHHHH
Confidence 4567777555432 222334444444444432221 22223556788999999999999985 66777664 55666
Q ss_pred HHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhcc----ccCC
Q 012991 113 IVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKG----KKDG 188 (452)
Q Consensus 113 ~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~----~~~~ 188 (452)
.++.++ +++||.|++++++|.++..++ +..|++++.++ .++ .+++++.+++. +..+
T Consensus 176 ~~i~al--------~~~Gd~Vi~d~~~h~s~~~~~----~~~Ga~v~~~~----~~d----~~~le~~l~~~i~~~~p~t 235 (489)
T PLN02483 176 TIIPAL--------IGKGGLIISDSLNHNSIVNGA----RGSGATIRVFQ----HNT----PSHLEEVLREQIAEGQPRT 235 (489)
T ss_pred HHHHHh--------CCCCCEEEEcchhhHHHHHHH----HHcCCeEEEEe----CCC----HHHHHHHHHhhhhcccccc
Confidence 666665 589999999999999987654 55699999984 333 23344433311 0001
Q ss_pred --CceE-EEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCcc---------ccccccCccEEEEcCcccCc
Q 012991 189 --KMIR-LAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIK---------IDVKEIGADFYVSNLHKWFF 256 (452)
Q Consensus 189 --~~~~-lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~---------~~~~~~~~d~~~~s~~K~l~ 256 (452)
+..+ +|++++..+++|.+.++++|+++|++||+ ++++|++|+.|... +++...+.|+++.|++|+ +
T Consensus 236 ~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~-~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs-~ 313 (489)
T PLN02483 236 HRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKA-YVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKS-F 313 (489)
T ss_pred ccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCC-EEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchh-c
Confidence 1124 66777778999999999999999999999 79999999876432 222223679999999997 6
Q ss_pred CCCCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhh--cCHHHHHHHHHHHHHHH
Q 012991 257 CPPSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFE--GGIDGIMQRNHEQALKM 334 (452)
Q Consensus 257 g~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~--~g~~~~~~~~~~~~~~l 334 (452)
|+.| |+++.++++++. +. .... ...+.++.+.....++.++++.+...+ +-..+.+++++++++++
T Consensus 314 g~~G-G~i~~~~~li~~-l~-~~~~---------~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l 381 (489)
T PLN02483 314 GSCG-GYIAGSKELIQY-LK-RTCP---------AHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFF 381 (489)
T ss_pred ccCc-eEEEcCHHHHHH-HH-HhCc---------cccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHH
Confidence 7777 898888887775 21 1100 000112222223333445666554210 01234567889999999
Q ss_pred HHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccc
Q 012991 335 ARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITG 414 (452)
Q Consensus 335 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (452)
++.|.++ |+.+..+.. ++++++.+. ...+..++.+.|.++ ||.+.....+.. ....+
T Consensus 382 ~~~L~~~-G~~v~~~~~--sp~~~l~l~------~~~~~~~~~~~Ll~~-GI~v~~~~fp~~-------------p~~~~ 438 (489)
T PLN02483 382 RSELQKM-GFEVLGDND--SPVMPIMLY------NPAKIPAFSRECLKQ-NVAVVVVGFPAT-------------PLLLA 438 (489)
T ss_pred HHHHHHC-CCcccCCCC--CCEEEEEEC------CHHHHHHHHHHHHHC-CcEEeeeCCCCC-------------CCCCc
Confidence 9999987 777655433 456666554 233556788888775 999864322211 12346
Q ss_pred eEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 415 YARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 415 ~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
.+|++++..+|.+||++++++|+++.+.
T Consensus 439 ~vRi~isa~~t~edId~~l~~L~~~~~~ 466 (489)
T PLN02483 439 RARICISASHSREDLIKALEVISEVGDL 466 (489)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 8999999989999999999999998753
No 106
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.95 E-value=6.4e-26 Score=225.22 Aligned_cols=369 Identities=13% Similarity=0.072 Sum_probs=236.3
Q ss_pred cccCCCCCCC--CCHHHHHhhhcc-CCCCeEEeccCCCC-----CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHH
Q 012991 14 VSKKPKLTRC--ISEAEIRDEFSH-HQHGVARINNGSFG-----SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILES 85 (452)
Q Consensus 14 ~~~~~~~~~~--~~~~~ir~~~~~-~~~~~~~l~~~~~~-----~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (452)
++|.+.+... ..+..+++.+.. .+++++.|..|.+. +.|+.+.+++.+.+... ....|....+..++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~-----~~~~Y~~~~G~~~l 79 (409)
T PLN00143 5 NLKTEPPSYSIDDAVKFLKENFNEDDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSA-----KFNSYAPTGGILPA 79 (409)
T ss_pred ccCCCcccchHHHHHHHHHHhcccCCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCc-----CCCCCCCCCCCHHH
Confidence 3455544322 224555665543 45689999998875 77888889888766431 11224444566778
Q ss_pred HHHHHhHhC------CCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEE
Q 012991 86 RAAVKDLIN------ADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVV 159 (452)
Q Consensus 86 ~~~la~~~~------~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~ 159 (452)
|++++++++ ++ +++|++|+|+++++.+++.++ +++||+|++++|.|+.....+ ...|.++.
T Consensus 80 r~aia~~~~~~~g~~~~-~~~I~it~G~~~al~~~~~~l--------~~~gd~v~v~~P~y~~~~~~~----~~~g~~~~ 146 (409)
T PLN00143 80 RRAIADYLSNDLPYQLS-PDDVYLTLGCKHAAEIIIKVL--------ARPEANILLPRPGFPDVETYA----IFHHLEIR 146 (409)
T ss_pred HHHHHHHHHhhcCCCCC-HhhEEEecChHHHHHHHHHHH--------cCCCCEEEEcCCCCcCHHHHH----HHcCCEEE
Confidence 888888873 43 789999999999999999987 589999999999998865444 44699999
Q ss_pred EEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCc
Q 012991 160 EVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSI 235 (452)
Q Consensus 160 ~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~ 235 (452)
.+++. .++...+ +++|++++ .++++++++++|+||||.+++ +++|+++|++|++ ++|+|+++.....
T Consensus 147 ~~~~~--~~~~~~~d~~~l~~~~------~~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~-~ii~De~Y~~l~~ 217 (409)
T PLN00143 147 HFDLL--PEKGWEVDLDAVEAIA------DENTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGI-LVIADEVYGHIVF 217 (409)
T ss_pred EEecc--CCCCCcCCHHHHHHhc------ccCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCC-eEEEEcccccccc
Confidence 88652 1122334 88898887 467899999999999999998 5577888999999 7999999864221
Q ss_pred ------cc-cccccCccEEEEcCcccCcCCCC--cEEEEEe-cC-cccc-CCCCCceeccCCCCcccccccccccCcccc
Q 012991 236 ------KI-DVKEIGADFYVSNLHKWFFCPPS--VAFLYCR-KS-ILSS-DMHHPVVSHEFGNGLPIESAWIGTRDYSAQ 303 (452)
Q Consensus 236 ------~~-~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~-~~-~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (452)
++ .+.....-+++.|++|. ++.+| +|++++. ++ +++. ........ ..... ...+...+
T Consensus 218 ~~~~~~~~~~~~~~~~vi~~~SfSK~-f~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~q 287 (409)
T PLN00143 218 GSKPFVPMGLFASIVPVITLGSISKR-WMIPGWGLGWLVTCDPSGLLQICEIADSIKK--------ALNPA-PFPPTFIQ 287 (409)
T ss_pred CCCCCcchhhhcccCcEEEEccchhh-cCCCccceEEEEeeCchhhhhhHHHHHHHHH--------HHhcc-CCCCchHH
Confidence 11 11111234788899995 67777 8888873 43 3221 00000000 00000 11122233
Q ss_pred ccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCCh-hhHHHHHHHHhh
Q 012991 304 LVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGE-DDALRLRGHLRV 382 (452)
Q Consensus 304 ~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~L~~ 382 (452)
.++..+++.... +-+++.++++++.++.+.+.|.++++.....++. .++++|+.++.... .+ .+..++...+.+
T Consensus 288 ~a~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~-gg~f~w~~l~~~~~--~~~~~~~~~~~~ll~ 362 (409)
T PLN00143 288 AAIPEILEKTTE--DFFSKTINILRAALAFCYDKLKEIPCIMCPQKAE-GAFFALVKLNLLLL--EDIEDDMEFCLKLAK 362 (409)
T ss_pred HHHHHHHhcChH--HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCC-eeEEEEEecchhhc--CCCCCHHHHHHHHHH
Confidence 333333321000 1255667777777888888887764333222222 27899998862100 01 134566655545
Q ss_pred hcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 383 RFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 383 ~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
+.||.+.++..+ ...+++||+++. +.++++..+++|+++++.
T Consensus 363 ~~gV~v~pg~~f----------------~~~~~iRi~~~~--~~~~l~~al~rl~~~l~~ 404 (409)
T PLN00143 363 EESLIILPGVTV----------------GLKNWLRITFAV--EQSSLEDGLGRLKSFCGR 404 (409)
T ss_pred hCCEEEeCcccc----------------CCCCeEEEEEcC--CHHHHHHHHHHHHHHHHH
Confidence 569999776554 225799999984 688899999999998864
No 107
>PRK07683 aminotransferase A; Validated
Probab=99.95 E-value=7.1e-26 Score=223.58 Aligned_cols=338 Identities=13% Similarity=0.152 Sum_probs=228.5
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh----CCC-CCC-cEEEecChhH
Q 012991 37 QHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI----NAD-DVG-EISLVDNATT 109 (452)
Q Consensus 37 ~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~-~~~-~i~~t~g~t~ 109 (452)
.+.++.|+.+.+. +.|+.+.+++.+.+... ...|...++..++|+.+++++ |.+ +++ +|++|+|+++
T Consensus 27 ~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~------~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~ 100 (387)
T PRK07683 27 YDNLISLTIGQPDFPTPSHVKEAAKRAITEN------YTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASE 100 (387)
T ss_pred cCCeEEecCCCCCCCCCHHHHHHHHHHHhcC------CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHH
Confidence 4678999988765 44567888888776421 112333455677888888877 432 256 8999999999
Q ss_pred HHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCC
Q 012991 110 AAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDG 188 (452)
Q Consensus 110 a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~ 188 (452)
|+.+++.++ +++||+|++++|.|......+ ...|++++.++++ .+...+ .+.+++.+ .
T Consensus 101 al~~~~~~l--------~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~~---~~~~~~~~~~l~~~~------~ 159 (387)
T PRK07683 101 AIDIAFRTI--------LEPGTEVILPAPIYPGYEPII----RLCGAKPVFIDTR---STGFRLTAEALENAI------T 159 (387)
T ss_pred HHHHHHHHh--------CCCCCEEEEcCCCccchHHHH----HHcCCEEEEeecC---cccCCCCHHHHHHhc------C
Confidence 999999876 578999999999998765554 4469999998542 112223 67888887 4
Q ss_pred CceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCc---ccccccc----CccEEEEcCcccCcCC
Q 012991 189 KMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSI---KIDVKEI----GADFYVSNLHKWFFCP 258 (452)
Q Consensus 189 ~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~---~~~~~~~----~~d~~~~s~~K~l~g~ 258 (452)
++++++++++++||||..++ +++|.++|+++|+ ++|+|++++.... ...+... +-.+++.|++|. +|.
T Consensus 160 ~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~-~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~-~~~ 237 (387)
T PRK07683 160 EKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNI-FVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKS-HSM 237 (387)
T ss_pred cCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCe-EEEEecccccceeCCCcCChhhccCCcCCeEEEeecccc-ccC
Confidence 67899999999999999987 6678899999999 7999999875321 1111111 235788899996 665
Q ss_pred CC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 012991 259 PS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMAR 336 (452)
Q Consensus 259 ~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~ 336 (452)
+| +|++++++++++. + .....+ .....+.. +..++..++.....-.+.++++++++++.+.+
T Consensus 238 pGlRiG~i~~~~~l~~~-~-~~~~~~-----------~~~~~~~~---~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 301 (387)
T PRK07683 238 TGWRIGFLFAPSYLAKH-I-LKVHQY-----------NVTCASSI---SQYAALEALTAGKDDAKMMRHQYKKRRDYVYN 301 (387)
T ss_pred ccceeEEEEcCHHHHHH-H-HHHHHh-----------ccCCCChH---HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 66 8999888776665 1 111000 00111222 22333334432101245667777888888888
Q ss_pred HHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceE
Q 012991 337 MLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYA 416 (452)
Q Consensus 337 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i 416 (452)
.|.+. ++.+..++. +.++|..++. ...+..++...+.++.||.+.++..+.. ..++++
T Consensus 302 ~l~~~-~~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~ll~~~gI~v~pg~~f~~--------------~~~~~~ 359 (387)
T PRK07683 302 RLISM-GLDVEKPTG--AFYLFPSIGH-----FTMSSFDFALDLVEEAGLAVVPGSAFSE--------------YGEGYV 359 (387)
T ss_pred HHHHc-CCcccCCCe--eEEEEEeccc-----CCCCHHHHHHHHHHhCCEEEcCchhhCC--------------CCCCeE
Confidence 88876 666555543 5667766651 1345566776654557999987765522 235799
Q ss_pred EecccccCCHHHHHHHHHHHHHHHhcc
Q 012991 417 RISHQVYNTLEDYEKFRDAVILLVEEG 443 (452)
Q Consensus 417 Ris~~~~~t~~di~~l~~~l~~~~~~~ 443 (452)
||+++. ++++++..+++|.++++.-
T Consensus 360 Ri~~~~--~~~~~~~al~~l~~~l~~~ 384 (387)
T PRK07683 360 RLSYAY--SIETLKEGLDRLEAFLQQK 384 (387)
T ss_pred EEEecC--CHHHHHHHHHHHHHHHHhh
Confidence 999985 6889999999999988653
No 108
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.95 E-value=2.3e-25 Score=221.70 Aligned_cols=342 Identities=11% Similarity=0.118 Sum_probs=228.2
Q ss_pred CCCeEEeccCC-CC-CCcHHHHHHHHHHHHHHhcCCchh-hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHH
Q 012991 37 QHGVARINNGS-FG-SCPKSVLADQQKWQLKFLQQPDDF-YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAI 113 (452)
Q Consensus 37 ~~~~~~l~~~~-~~-~~p~~v~e~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~ 113 (452)
++.+++|..+. .+ ..++.+.+++.+.+..+....+.. ..+...+...++++.+++++|.+ +. ++.++|++|+..
T Consensus 45 ~~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~~--~~-~~~~sG~~an~~ 121 (407)
T PRK09064 45 EREVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGKE--AA-LVFTSGYVSNDA 121 (407)
T ss_pred CceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCCC--cE-EEECcHHHHHHH
Confidence 35677775443 33 335569999998877653222111 11334677899999999999863 44 555666778887
Q ss_pred HHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEE
Q 012991 114 VLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRL 193 (452)
Q Consensus 114 ~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~l 193 (452)
++..+.+ ..+++.|+.+...|.+...++.. .+.++..+ +..+ .+++++.++... .+++++
T Consensus 122 ai~~l~~------~~~~~~i~~~~~~h~s~~~~~~~----~~~~~~~~----~~~d----~~~le~~l~~~~--~~~~~~ 181 (407)
T PRK09064 122 TLSTLAK------LIPDCVIFSDELNHASMIEGIRR----SRCEKHIF----RHND----VAHLEELLAAAD--PDRPKL 181 (407)
T ss_pred HHHHHhC------CCCCCEEEEeCcchHHHHHHHHH----cCCcEEEE----CCCC----HHHHHHHHHhcc--CCCCeE
Confidence 7776631 24667777777778877666533 46676655 3332 466666664320 257899
Q ss_pred EEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCcc-----c-cccc--cCccEEEEcCcccCcCCCCcEEEE
Q 012991 194 AIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIK-----I-DVKE--IGADFYVSNLHKWFFCPPSVAFLY 265 (452)
Q Consensus 194 v~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~-----~-~~~~--~~~d~~~~s~~K~l~g~~G~G~l~ 265 (452)
|++++++|++|.+.|+++|.++|++||+ ++|+|++|+.|... + +... ..+|+++.|++|. +|+.| |+++
T Consensus 182 v~~~~v~s~~G~~~~l~~i~~l~~~~~~-~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa-~g~~G-G~~~ 258 (407)
T PRK09064 182 IAFESVYSMDGDIAPIAEICDLADKYNA-LTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKA-FGVMG-GYIA 258 (407)
T ss_pred EEEeCCCCCCccccCHHHHHHHHHHcCC-EEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchh-hhccC-ceEe
Confidence 9999999999999999999999999999 89999999865421 0 1111 1468999999996 67776 8888
Q ss_pred EecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 012991 266 CRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS 345 (452)
Q Consensus 266 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~ 345 (452)
.++++++. + ..... ...+.+..+.....+..++++++.+ .+..+++++++++++.+.|.++ |++
T Consensus 259 ~~~~~~~~-l-~~~~~---------~~~~t~~~~~~~~~aa~~al~~~~~----~~~~~~~~~~~~~~l~~~L~~~-g~~ 322 (407)
T PRK09064 259 GSAALVDA-V-RSYAP---------GFIFTTSLPPAIAAAALASIRHLKE----SNEERERHQERAAKLKAALDAA-GIP 322 (407)
T ss_pred cCHHHHHH-H-HHhCc---------cccccCcCCHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHHHc-CCC
Confidence 88776654 1 11100 0001122222344555566777664 2345678889999999999886 776
Q ss_pred cCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCC
Q 012991 346 LGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNT 425 (452)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t 425 (452)
+..+. ++++.+.++ +..++.++.+.|.++.||.++....+.. ....+++|++++.++|
T Consensus 323 ~~~~~---~~iv~i~~~------~~~~~~~l~~~L~~~~gi~v~~~~~p~~-------------~~~~~~lRis~~~~~t 380 (407)
T PRK09064 323 VMPNE---SHIVPVMVG------DPEKCKKASDMLLEEHGIYVQPINYPTV-------------PRGTERLRITPTPFHT 380 (407)
T ss_pred CCCCC---CCEEEEEeC------CHHHHHHHHHHHHHhCCEEEeeECCCCC-------------CCCCceEEEEeCCCCC
Confidence 65432 556666654 2345678888886556999975433211 1223689999999999
Q ss_pred HHHHHHHHHHHHHHHhc
Q 012991 426 LEDYEKFRDAVILLVEE 442 (452)
Q Consensus 426 ~~di~~l~~~l~~~~~~ 442 (452)
.+|+++++++|+++++.
T Consensus 381 ~edi~~l~~~l~~~~~~ 397 (407)
T PRK09064 381 DEMIDHLVEALVEVWAR 397 (407)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998864
No 109
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.95 E-value=6.7e-26 Score=224.53 Aligned_cols=339 Identities=15% Similarity=0.127 Sum_probs=225.3
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh----C---CCCCC-cEEEecCh
Q 012991 37 QHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI----N---ADDVG-EISLVDNA 107 (452)
Q Consensus 37 ~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~---~~~~~-~i~~t~g~ 107 (452)
+..++.|+.+.+. ..|+.+.+++.+.+.. ... ..|. ..+..++|+++++++ | ++ ++ +|++|+|+
T Consensus 43 ~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~----~~~-~~Y~-~~G~~~lr~aia~~~~~~~g~~~~~-~~~~I~it~Gs 115 (410)
T PRK06290 43 DMELIDMGVGEPDEMADESVVEVLCEEAKK----PEN-RGYA-DNGIQEFKEAAARYMEKVFGVKDID-PVTEVIHSIGS 115 (410)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhC----CCC-CCCC-CCCcHHHHHHHHHHHHHHcCCCcCC-CcceEEEccCH
Confidence 4568999988776 3455577777654321 111 1122 245677888888875 4 43 45 79999999
Q ss_pred hHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhcccc
Q 012991 108 TTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKK 186 (452)
Q Consensus 108 t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~ 186 (452)
++++..++.++ +++||.|++++|.|+..... ++..|.++..++++. +....+ ++.+++.+
T Consensus 116 ~~al~~~~~~~--------~~~gd~Vlv~~P~y~~~~~~----~~~~g~~v~~v~~~~--~~~~~~d~~~l~~~~----- 176 (410)
T PRK06290 116 KPALAMLPSCF--------INPGDVTLMTVPGYPVTGTH----TKYYGGEVYNLPLLE--ENNFLPDLDSIPKDI----- 176 (410)
T ss_pred HHHHHHHHHHh--------CCCCCEEEEeCCCCccHHHH----HHHcCCEEEEEecCC--CcCCcCCHHHHHHhh-----
Confidence 99999999876 58999999999999876444 455699999996531 112233 78888877
Q ss_pred CCCceEEEEEeccCCCCcccccH---HHHHHHHHHcCCCEEEEecccccCCc---ccc---cc-ccCccEEEEcCcccCc
Q 012991 187 DGKMIRLAIIDHITSMPCVVIPV---RKLVKICRDEGVDQVFVDAAHAMGSI---KID---VK-EIGADFYVSNLHKWFF 256 (452)
Q Consensus 187 ~~~~~~lv~~~~~~n~tG~~~~l---~~i~~l~~~~~~~~~ivD~a~~~g~~---~~~---~~-~~~~d~~~~s~~K~l~ 256 (452)
..++++|++++|+||||.+++. ++|.++|++|++ ++|+|++++.... +.. +. ..+.++++.|++|. +
T Consensus 177 -~~~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~-~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~-~ 253 (410)
T PRK06290 177 -KEKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNI-IVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKA-Y 253 (410)
T ss_pred -cccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCe-EEEEecchhhceeCCCCcChhcCCCccccEEEEeechhh-c
Confidence 4578999999999999999985 577888999999 7999999864321 111 11 11356889999996 6
Q ss_pred CCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 012991 257 CPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKM 334 (452)
Q Consensus 257 g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l 334 (452)
|.+| +|+++.+++++.. + ..... .+....+...+ .++...+... .-.+..+++++++++.+
T Consensus 254 g~~GlRiG~ii~~~~l~~~-l-~~~~~-----------~~~~~~~~~~q---~aa~~~l~~~-~~~~~~~~~~~~~~~~l 316 (410)
T PRK06290 254 NMTGWRLAFVVGNELIVKA-F-ATVKD-----------NNDSGQFIAIQ---KAGIYALDHP-EITEKIREKYSRRLDKL 316 (410)
T ss_pred CCchhheEeEEeCHHHHHH-H-HHHHh-----------ccccCCcHHHH---HHHHHHhhCc-HHHHHHHHHHHHHHHHH
Confidence 7677 7999988877764 1 11100 00011111222 2233333321 12466777888889999
Q ss_pred HHHHHHHcCCCcCCCcccccceEEEEcCCccccC-ChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCcc
Q 012991 335 ARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVM-GEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIIT 413 (452)
Q Consensus 335 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (452)
.+.|.+. ++.+..+.+ +.++|+.+|...... ...+..++.+.|.++.++.+.++.. -+
T Consensus 317 ~~~L~~~-g~~~~~p~g--~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~------------------~~ 375 (410)
T PRK06290 317 VKILNEV-GFKAEMPGG--TFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDD------------------AG 375 (410)
T ss_pred HHHHHhC-CCeecCCCe--eeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCcc------------------cc
Confidence 9999886 776555543 667788887321000 0125678999998764555432221 13
Q ss_pred ceEEeccccc-CCHHHHHHHHHHHHHHHhc
Q 012991 414 GYARISHQVY-NTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 414 ~~iRis~~~~-~t~~di~~l~~~l~~~~~~ 442 (452)
+++||+++.. .++++.++++++|++.+.+
T Consensus 376 ~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~ 405 (410)
T PRK06290 376 HFLRFSVTFEAKDEEEEDRILEEIKRRLSD 405 (410)
T ss_pred CeEEEEEEcccccccchhHHHHHHHHHHhh
Confidence 6999999743 4678899999999998864
No 110
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.95 E-value=1.3e-25 Score=219.70 Aligned_cols=345 Identities=13% Similarity=0.066 Sum_probs=231.0
Q ss_pred CCCCCCCCCHHHHHhhhccCCCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCC
Q 012991 17 KPKLTRCISEAEIRDEFSHHQHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINA 95 (452)
Q Consensus 17 ~~~~~~~~~~~~ir~~~~~~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~ 95 (452)
||.++...++.....+.......++.|+.+... ..|+.+.+++.+.+..... |... ...++|+.+++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~n~~~~~~~~~~a~~~~~~~~~~-------Y~~~-~~~~Lr~aia~~~~v 72 (360)
T PRK07392 1 MPRPAHGGNLAWAAAIAGCPPDAILDFSASINPLGPPESVIAAIQSALSALRH-------YPDP-DYRELRLALAQHHQL 72 (360)
T ss_pred CCcccCCccHHHHHHHcCCCcccEEEeCCcCCCCCCCHHHHHHHHHHHHHhhc-------CCCc-CHHHHHHHHHHHhCc
Confidence 466777777776666655444567889876443 5667788888876543221 2212 246899999999999
Q ss_pred CCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChH---H
Q 012991 96 DDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEE---E 172 (452)
Q Consensus 96 ~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~---~ 172 (452)
+ +++|++|+|+++++.+++.++ .+|+.|++++|.|......+ +..|++++.++++. +... .
T Consensus 73 ~-~~~I~it~G~~~~i~~~~~~l---------~~g~~vlv~~P~y~~~~~~~----~~~g~~~~~v~~~~--~~~~~~~~ 136 (360)
T PRK07392 73 P-PEWILPGNGAAELLTWAGREL---------AQLRAVYLITPAFGDYRRAL----RAFGATVKELPLPL--DQPSPGLT 136 (360)
T ss_pred C-hhhEEECCCHHHHHHHHHHHh---------CCCCeEEEECCCcHHHHHHH----HHcCCeEEEEeccc--ccCCcccc
Confidence 6 899999999999999998865 46789999999998875554 45699999996531 1111 1
Q ss_pred H-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCcc---cc----ccccCc
Q 012991 173 I-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIK---ID----VKEIGA 244 (452)
Q Consensus 173 ~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~---~~----~~~~~~ 244 (452)
. ++.+++. ..+++++++++|+||||.+++.++|.++++++++ +|+|+++..-..+ .. +....-
T Consensus 137 ~~~~~~~~~-------~~~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~--~IiDE~y~~~~~~~~~~s~~~~~~~~~~ 207 (360)
T PRK07392 137 LRLQTLPPQ-------LTPNDGLLLNNPHNPTGKLWSREAILPLLEQFAL--VVVDEAFMDFLPPDAEQSLIPCLAEYPN 207 (360)
T ss_pred cCHHHHHHh-------ccCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE--EEEECchhhhccCccccchHHHhhcCCC
Confidence 1 3444432 2467899999999999999999999999999976 5669987532210 01 111123
Q ss_pred cEEEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHH
Q 012991 245 DFYVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDG 322 (452)
Q Consensus 245 d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~ 322 (452)
-+++.|++|. +|.+| +|++++++++++. + .... ...+.+...+.++..+++. .. -.+.
T Consensus 208 vi~i~S~SK~-~~l~GlRiG~~v~~~~~~~~-~-~~~~-------------~~~~~s~~~q~~~~~~l~~-~~---~~~~ 267 (360)
T PRK07392 208 LIILRSLTKF-YSLPGLRLGYAIAHPDRLQR-W-QQWR-------------DPWPVNGLAAAAAIAALAD-RD---FQQQ 267 (360)
T ss_pred EEEEEechhh-hcCCchheeeeeCCHHHHHH-H-HhhC-------------CCCCCCHHHHHHHHHHhcc-HH---HHHH
Confidence 4778899996 66566 8999888777664 2 1110 0012233333333333332 11 1344
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCC
Q 012991 323 IMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQ 402 (452)
Q Consensus 323 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~ 402 (452)
.++.+++.++.+.+.|..++++.+.. +. ++++++.++ . ++.++.+.+.+++||.+.++..+..
T Consensus 268 ~~~~~~~~r~~l~~~L~~~~~~~~~~-~~--~~fl~~~~~-------~-~~~~l~~~ll~~~gv~v~pg~~f~~------ 330 (360)
T PRK07392 268 TWAWLPPAREALFQGLASLPGLTPLP-SA--ANFLLVQSQ-------G-SALQLQEKLLQQHRILIRDCLSFPE------ 330 (360)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcEECC-CC--CCEEEEEcC-------C-CHHHHHHHHHhhCCEEEEeCCCCCC------
Confidence 45567778888888898776766542 32 678887764 1 5567888765556999987765421
Q ss_pred CCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 403 AGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 403 ~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
..++++||+++ +.++.+++.++|++++..
T Consensus 331 --------~~~~~iRi~~~---~~~~~~~l~~al~~~~~~ 359 (360)
T PRK07392 331 --------LGDRYFRVAVR---TEAENQRLLEALAAILAN 359 (360)
T ss_pred --------CCCCEEEEEeC---CHHHHHHHHHHHHHHhhc
Confidence 23579999998 577778888888887754
No 111
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=7.2e-26 Score=221.99 Aligned_cols=326 Identities=13% Similarity=0.085 Sum_probs=222.9
Q ss_pred CeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHH
Q 012991 39 GVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQ 117 (452)
Q Consensus 39 ~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~ 117 (452)
.+++|+.+..+ ..|+.+.+++.+....... |... ...++|++++++++++ +++|++|+|+++++.+++.+
T Consensus 33 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~-------Y~~~-~~~~Lr~~ia~~~~~~-~~~I~it~G~~~~l~~~~~~ 103 (369)
T PRK08153 33 FRARIGANESGFGPSPSVIAAMREAAAEIWK-------YGDP-ENHDLRHALAAHHGVA-PENIMVGEGIDGLLGLIVRL 103 (369)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHHHhhc-------CCCC-ccHHHHHHHHHHhCCC-HHHEEEcCCHHHHHHHHHHH
Confidence 34689887665 5667788988876543322 2111 2578999999999996 78999999999999999987
Q ss_pred hhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEe
Q 012991 118 IGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIID 197 (452)
Q Consensus 118 l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~ 197 (452)
+ +++||.|++++|.|+.....+ ...|.+++.+++ +++...++.+++.+. ..++++|+++
T Consensus 104 ~--------~~~gd~vlv~~p~y~~~~~~~----~~~g~~~~~vp~----~~~~~~~~~l~~~~~-----~~~~~~i~l~ 162 (369)
T PRK08153 104 Y--------VEPGDPVVTSLGAYPTFNYHV----AGFGGRLVTVPY----RDDREDLDALLDAAR-----RENAPLVYLA 162 (369)
T ss_pred h--------cCCCCEEEECCCcchHHHHHH----HHcCCeEEEeeC----CCCCCCHHHHHHHhc-----ccCCcEEEEe
Confidence 6 589999999999999876554 345889998854 222222677766653 3678999999
Q ss_pred ccCCCCcccccHHHHHHHHHHc--CCCEEEEecccccCCc---cccccc-cCccEEEEcCcccCcCCCC--cEEEEEecC
Q 012991 198 HITSMPCVVIPVRKLVKICRDE--GVDQVFVDAAHAMGSI---KIDVKE-IGADFYVSNLHKWFFCPPS--VAFLYCRKS 269 (452)
Q Consensus 198 ~~~n~tG~~~~l~~i~~l~~~~--~~~~~ivD~a~~~g~~---~~~~~~-~~~d~~~~s~~K~l~g~~G--~G~l~~~~~ 269 (452)
+|+||||.++|.+++.++++.+ ++ ++|+|++++.... ...+.. ....+++.|++|. +|.+| +|+++++++
T Consensus 163 ~P~NPtG~~~~~~~l~~l~~~~~~~~-~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~-~g~~GlRiG~~v~~~~ 240 (369)
T PRK08153 163 NPDNPMGSWHPAADIVAFIEALPETT-LLVLDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKA-YGLAGARVGYAIGAPG 240 (369)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCCc-EEEEeCchhhhcCcccchhhhhcCCCEEEEecchHh-ccCcchheeeeecCHH
Confidence 9999999999998888877654 89 7999999753221 111111 1234778899996 67666 799998877
Q ss_pred ccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCC
Q 012991 270 ILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSP 349 (452)
Q Consensus 270 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 349 (452)
+++. +. .... ..+.+...+.++.++++. .+ -.+.+++..++.++++.+.|.+. ++... |
T Consensus 241 ~~~~-l~-~~~~-------------~~~~s~~~q~~~~~~l~~-~~---~~~~~~~~~~~~r~~~~~~L~~~-g~~~~-p 299 (369)
T PRK08153 241 TIKA-FD-KVRN-------------HFGMNRIAQAAALAALKD-QA---YLAEVVGKIAAARDRIAAIARAN-GLTPL-P 299 (369)
T ss_pred HHHH-HH-Hhhc-------------CCCCCHHHHHHHHHHhcC-HH---HHHHHHHHHHHHHHHHHHHHHHC-CCccC-C
Confidence 7664 11 1100 012233333333333321 11 25566777778888888888765 66533 3
Q ss_pred cccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHH
Q 012991 350 PEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDY 429 (452)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di 429 (452)
.. ++++++.++. +...+.++.+.|.+ +||.++..... ..++++|+++. +.+|+
T Consensus 300 ~~--~~f~~~~~~~-----~~~~a~~l~~~l~~-~Gi~v~~p~~~----------------~~~~~iRis~~---~~~~~ 352 (369)
T PRK08153 300 SA--TNFVAIDCGR-----DGAFARAVLDGLIA-RDIFVRMPGVA----------------PLDRCIRVSCG---PDEEL 352 (369)
T ss_pred Cc--CcEEEEECCC-----CcccHHHHHHHHHH-CCeEEeeCCCC----------------CCCCeEEEecC---CHHHH
Confidence 33 6788877641 23456788888876 49998521111 12469999998 79999
Q ss_pred HHHHHHHHHHHhccc
Q 012991 430 EKFRDAVILLVEEGQ 444 (452)
Q Consensus 430 ~~l~~~l~~~~~~~~ 444 (452)
++++++|++++...+
T Consensus 353 ~~~~~al~~~~~~~~ 367 (369)
T PRK08153 353 DLFAEALPEALEAAR 367 (369)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999986543
No 112
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.95 E-value=4.2e-26 Score=226.40 Aligned_cols=338 Identities=16% Similarity=0.145 Sum_probs=228.3
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh-----CCCCCCcEEEecChhHH
Q 012991 37 QHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI-----NADDVGEISLVDNATTA 110 (452)
Q Consensus 37 ~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~-----~~~~~~~i~~t~g~t~a 110 (452)
+.++++|+.+.++ +.|+.+.+++.+.... ...|....+..++|+.+++++ +++ +++|++|+|+++|
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-------~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~-~~~i~~t~G~~~a 100 (397)
T PRK07568 29 GIKVYHLNIGQPDIKTPEVFFEAIKNYDEE-------VLAYSHSQGIPELREAFAKYYKKWGIDVE-PDEILITNGGSEA 100 (397)
T ss_pred CCCEEEecCCCCCCCCCHHHHHHHHHHhcC-------CcCcCCCCCCHHHHHHHHHHHHHhCCCCC-cceEEEcCChHHH
Confidence 4568999998876 5678788887765321 122344556788899999987 354 6899999999999
Q ss_pred HHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHH-H-HHHHHHHHhccccCC
Q 012991 111 AAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEE-I-INEFKKGIEKGKKDG 188 (452)
Q Consensus 111 ~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~-~~~l~~~i~~~~~~~ 188 (452)
+.+++.++ +++||+|++++|.|...... ++..|.+++.++++. ++... . .+.+++++ .
T Consensus 101 l~~~~~~l--------~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~--~~g~~~~~~~~l~~~~------~ 160 (397)
T PRK07568 101 ILFAMMAI--------CDPGDEILVPEPFYANYNGF----ATSAGVKIVPVTTKI--EEGFHLPSKEEIEKLI------T 160 (397)
T ss_pred HHHHHHHh--------cCCCCEEEEecCCCccHHHH----HHHcCCEEEEeecCc--ccCCCCCCHHHHHHhc------C
Confidence 99999876 47899999999988764332 455699999886521 11111 1 58888888 5
Q ss_pred CceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCc----c---ccccc-cCccEEEEcCcccCcC
Q 012991 189 KMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSI----K---IDVKE-IGADFYVSNLHKWFFC 257 (452)
Q Consensus 189 ~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~----~---~~~~~-~~~d~~~~s~~K~l~g 257 (452)
+++++|++++|+||||.+++ +++|+++|+++|+ ++|+|++++.... . ..+.. ....+++.|++|. +|
T Consensus 161 ~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~-~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~-~~ 238 (397)
T PRK07568 161 PKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDL-FLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKR-YS 238 (397)
T ss_pred ccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCc-EEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhh-cc
Confidence 68899999999999999986 6788999999999 7999999753211 1 11111 1223778899996 55
Q ss_pred CCC--cEEEEEe-cCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 012991 258 PPS--VAFLYCR-KSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKM 334 (452)
Q Consensus 258 ~~G--~G~l~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l 334 (452)
++| +|++++. ++++.. + .... .. ..+.+...+.++..+++.... -++.+++.+++.++.+
T Consensus 239 ~~G~R~G~~~~~~~~~~~~-~-~~~~----------~~--~~~~s~~~q~~~~~~l~~~~~---~~~~~~~~~~~~~~~l 301 (397)
T PRK07568 239 ACGARIGCLISKNKELIAA-A-MKLC----------QA--RLSPPTLEQIGAAALLDTPES---YFDEVREEYKKRRDIL 301 (397)
T ss_pred CCCcceEEEecCCHHHHHH-H-HHHh----------hc--cCCCCcHHHHHHHHHhhCCHH---HHHHHHHHHHHHHHHH
Confidence 555 7888774 455543 1 0000 00 012233333334334432111 3566777788888999
Q ss_pred HHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhh-----cceEeeecccCCCCCCCCCCCCCCCC
Q 012991 335 ARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVR-----FGVEVPIHYQAPKDDGQPQAGARDKD 409 (452)
Q Consensus 335 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-----~gI~v~~~~~~~~~~~~~~~~~~~~~ 409 (452)
.+.|.+++++.+..|.+ +.++|+.++. .+..++.+.|.++ .||.+.++..+...+
T Consensus 302 ~~~L~~~~~~~~~~p~g--~~~~~~~l~~-------~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~----------- 361 (397)
T PRK07568 302 YEELNKIPGVVCEKPKG--AFYIIAKLPV-------DDAEDFAKWLLTDFNYNGETVMVAPASGFYATP----------- 361 (397)
T ss_pred HHHHhcCCCceecCCCc--ceEEEEecCC-------CCHHHHHHHHHhhcccccceEEEeCchHhcCCC-----------
Confidence 99998876666555543 5678888862 2566788877653 489987665442110
Q ss_pred CCccceEEecccccCCHHHHHHHHHHHHHHHhcc
Q 012991 410 GIITGYARISHQVYNTLEDYEKFRDAVILLVEEG 443 (452)
Q Consensus 410 ~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~~ 443 (452)
....+++|++++. +.++++..++.|++.++..
T Consensus 362 ~~~~~~iRls~~~--~~~~~~~~~~~l~~~l~~~ 393 (397)
T PRK07568 362 GLGKNEIRIAYVL--NEEDLKRAMEILKEALEKY 393 (397)
T ss_pred CCCCCeEEEEEeC--CHHHHHHHHHHHHHHHHHh
Confidence 1234799999974 6799999999999888653
No 113
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.95 E-value=1.8e-25 Score=221.08 Aligned_cols=339 Identities=14% Similarity=0.136 Sum_probs=230.9
Q ss_pred CCCCeEEeccCC-CCC-CcHHHHHHHHHHHHHHhcC-CchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHH
Q 012991 36 HQHGVARINNGS-FGS-CPKSVLADQQKWQLKFLQQ-PDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAA 112 (452)
Q Consensus 36 ~~~~~~~l~~~~-~~~-~p~~v~e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~ 112 (452)
.+++++.|..+. .+. .++.+.+++.+.+...... .......+..++.+++++.++++++.+ ..+++++| ++++.
T Consensus 31 ~g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~~--~~i~~~sG-~~a~~ 107 (385)
T TIGR01825 31 NGKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKTE--AALVFQSG-FNTNQ 107 (385)
T ss_pred CCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCCC--cEEEECcH-HHHHH
Confidence 567888888764 454 6677888888877543211 111122344677899999999999974 55666655 66777
Q ss_pred HHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceE
Q 012991 113 IVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIR 192 (452)
Q Consensus 113 ~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~ 192 (452)
.++.++ +++||.|+++++.|++....+.. .|.++..++ ..+ ++++++.+++.. .++++
T Consensus 108 ~a~~~~--------~~~gd~vi~~~~~~~~~~~~~~~----~g~~~~~~~----~~d----~~~l~~~l~~~~--~~~~~ 165 (385)
T TIGR01825 108 GVLSAL--------LRKGDIVLSDELNHASIIDGLRL----TKATKKIYK----HAD----MDDLDRVLRENP--SYGKK 165 (385)
T ss_pred HHHHHh--------CCCCCEEEEEccccHHHHHHHHh----cCCceEEeC----CCC----HHHHHHHHHhhc--cCCCe
Confidence 777765 58899999999999987665543 477776652 112 456666664321 24789
Q ss_pred EEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCcc---------ccccccCccEEEEcCcccCcCCCCcEE
Q 012991 193 LAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIK---------IDVKEIGADFYVSNLHKWFFCPPSVAF 263 (452)
Q Consensus 193 lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~---------~~~~~~~~d~~~~s~~K~l~g~~G~G~ 263 (452)
+|++++++|++|.+.|+++|.++|++||+ ++|+|++++.|..+ +++. .+.|+++.|++|++ |+.| |+
T Consensus 166 ~v~~~~v~~~tG~~~~~~~i~~l~~~~~~-~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~-~~~g-G~ 241 (385)
T TIGR01825 166 LIVTDGVFSMDGDVAPLPEIVELAERYGA-VTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAI-GVVG-GY 241 (385)
T ss_pred EEEEecCCcCCCCccCHHHHHHHHHHhCC-EEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHh-hcCC-CE
Confidence 99999999999999999999999999999 79999999766432 2232 46789999999985 6665 78
Q ss_pred EEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcC
Q 012991 264 LYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWG 343 (452)
Q Consensus 264 l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~ 343 (452)
++.++++++. + ...... + ...+..+...++++.++++.+.+ ..++.++.+++++++.+.|.++ +
T Consensus 242 ~~~~~~~~~~-~-~~~~~~-~--------~~~~~~~~~~~~a~~~al~~~~~----~~~~~~~~~~~~~~l~~~L~~~-g 305 (385)
T TIGR01825 242 AAGHKELIEY-L-KNRARP-F--------LFSTAQPPAVVAALAAAVDELQR----SPELMERLWDNTRFFKAGLGKL-G 305 (385)
T ss_pred EecCHHHHHH-H-HHhCcc-c--------cccCCCCHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHHHc-C
Confidence 8777776654 1 111000 0 00112222344555666665543 1346777788899999999886 7
Q ss_pred CCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEeccccc
Q 012991 344 TSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVY 423 (452)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~ 423 (452)
+++..+.. +++.+.++ ...+..++++.|.++ ||.++....+.. .....++|++++.+
T Consensus 306 ~~~~~~~~---~~~~~~~~------~~~~~~~~~~~L~~~-gi~v~~~~~~~~-------------~~~~~~iRi~~~~~ 362 (385)
T TIGR01825 306 YDTGGSET---PITPVVIG------DEKAAQEFSRRLFDE-GIFAQSIVFPTV-------------PRGTARIRNIPTAE 362 (385)
T ss_pred CCCCCCCC---CEEEEEEC------CHHHHHHHHHHHHHC-CcEEcccCCCCC-------------CCCCceEEEEEcCC
Confidence 77665432 35555443 233567899999876 999864332211 12336899999999
Q ss_pred CCHHHHHHHHHHHHHHHhc
Q 012991 424 NTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 424 ~t~~di~~l~~~l~~~~~~ 442 (452)
++++|+++++++|+++++.
T Consensus 363 ~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 363 HTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 9999999999999998854
No 114
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.95 E-value=1.1e-25 Score=223.22 Aligned_cols=347 Identities=13% Similarity=0.083 Sum_probs=225.5
Q ss_pred HHHHHhhhc----cCCCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh----CCC
Q 012991 26 EAEIRDEFS----HHQHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI----NAD 96 (452)
Q Consensus 26 ~~~ir~~~~----~~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~ 96 (452)
+..+++.+. ..+..++.|+.+.+. +.|+.+.+++.+.+.... .|....+..++|+.+++++ |.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~-------~Y~~~~G~~~lr~~ia~~~~~~~g~~ 85 (396)
T PRK09147 13 FEKLRALFAGVTPPADLPPISLSIGEPKHPTPAFIKDALAANLDGLA-------SYPTTAGLPALREAIAAWLERRYGLP 85 (396)
T ss_pred HHHHHHHHHhhhhccCCCeEecCCCCCCCCCCHHHHHHHHHHhhhhc-------CCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 355555543 246789999888776 456778888877653321 2222334556677777654 632
Q ss_pred --CC-CcEEEecChhHHHHHHHHHhhcccccCCCCC---CCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCCh
Q 012991 97 --DV-GEISLVDNATTAAAIVLQQIGRGFTEGRFHR---NDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASE 170 (452)
Q Consensus 97 --~~-~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~---g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~ 170 (452)
++ ++|++|+|+++++.+++.++ +++ |++|+++.|.|......+ +..|++++.++++ .++.
T Consensus 86 ~~~~~~~i~it~G~~~al~~~~~~l--------~~~~~~gd~vlv~~P~y~~~~~~~----~~~g~~~~~vp~~--~~~~ 151 (396)
T PRK09147 86 ALDPATQVLPVNGSREALFAFAQTV--------IDRDGPGPLVVCPNPFYQIYEGAA----LLAGAEPYFLNCD--PANN 151 (396)
T ss_pred cCCccceEEECCChHHHHHHHHHHH--------cCCCCCCCEEEEcCCCccchHHHH----HhcCCEEEEeccC--cccc
Confidence 24 48999999999999999987 477 889999999998765444 4569999999652 1122
Q ss_pred HHH-HHHHHHHHhccccCCCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCc-----ccc-c-
Q 012991 171 EEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSI-----KID-V- 239 (452)
Q Consensus 171 ~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~-----~~~-~- 239 (452)
..+ ++.+++.+ .++++++++++|+||||.+++ +++|+++|++|++ ++|+|++++.... +.. .
T Consensus 152 ~~~d~~~l~~~~------~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~-~ii~De~y~~~~~~~~~~~~~~~~ 224 (396)
T PRK09147 152 FAPDFDAVPAEV------WARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGF-VIASDECYSEIYFDEAAPPLGLLE 224 (396)
T ss_pred CccCHHHHHHHH------hhccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCe-EEEeeccccccccCCCCCCchhhh
Confidence 234 88888877 357899999999999999997 5567888999999 7999999864321 110 0
Q ss_pred -------cccCccEEEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHH
Q 012991 240 -------KEIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAV 310 (452)
Q Consensus 240 -------~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 310 (452)
...+-.+++.|++|. ++.+| +|+++.++++++. + ..... ......+...+.+..+++
T Consensus 225 ~~~~~~~~~~~~vi~~~S~SK~-~~~~GlRiG~~~~~~~l~~~-~-~~~~~-----------~~~~~~~~~~q~a~~~~~ 290 (396)
T PRK09147 225 AAAELGRDDFKRLVVFHSLSKR-SNVPGLRSGFVAGDAALLKK-F-LLYRT-----------YHGCAMPPAVQAASIAAW 290 (396)
T ss_pred hccccCccccccEEEEeccccc-cCCccceeeeecCCHHHHHH-H-HHHhh-----------hcccCCCHHHHHHHHHHh
Confidence 011223788899994 66666 8998888777764 1 11100 000112222222222222
Q ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeee
Q 012991 311 TFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPI 390 (452)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~ 390 (452)
.. ..-+.+.++.+++.++.+.+.|.+. +.+..|++ +.++|+.++ .+..++++.|.++.||.+.+
T Consensus 291 ---~~-~~~~~~~~~~~~~~~~~~~~~L~~~--~~~~~p~~--g~f~~~~~~--------~~~~~~~~~ll~~~gv~v~p 354 (396)
T PRK09147 291 ---ND-EAHVRENRALYREKFDAVTPILAPV--LDVQLPDA--GFYLWAKVP--------GDDTEFARRLYADYNVTVLP 354 (396)
T ss_pred ---cc-hhHHHHHHHHHHHHHHHHHHHHHHh--cCCCCCCe--eEEEEEECC--------CCHHHHHHHHHHhCCEEEeC
Confidence 11 1135566777788888888888764 44444443 888999885 23467777776556999976
Q ss_pred cccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHH
Q 012991 391 HYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLV 440 (452)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~ 440 (452)
+..+.... .. .....+++||+++. ++++++..+++|++++
T Consensus 355 g~~f~~~~-~~-------~~~~~~~iRi~~~~--~~~~l~~~l~rl~~~~ 394 (396)
T PRK09147 355 GSYLAREA-HG-------VNPGAGRVRIALVA--PLAECVEAAERIVDFC 394 (396)
T ss_pred Cccccccc-cC-------CCCCCCeEEEEecC--CHHHHHHHHHHHHHHh
Confidence 65442100 00 01235799999985 6788999999998876
No 115
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.95 E-value=1.8e-25 Score=219.21 Aligned_cols=288 Identities=15% Similarity=0.161 Sum_probs=198.2
Q ss_pred hhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCc
Q 012991 77 SLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGG 156 (452)
Q Consensus 77 ~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~ 156 (452)
+..+..+++++.+++++|.+ +.+++++|+ .|+..++..+ .++++.|+++..+|.++..++... .+.
T Consensus 53 g~~~~~~~~e~~la~~~~~~--~~l~~~sG~-~a~~~~~~~~--------~~~~d~ii~d~~~H~sv~~~~~~~---~~~ 118 (370)
T PRK05937 53 GPSSLLDDLEHKIAHFHGAP--EAFIVPSGY-MANLGLCAHL--------SSVTDYVLWDEQVHISVVYSLSVI---SGW 118 (370)
T ss_pred CChHHHHHHHHHHHHHhCCC--eEEEECChH-HHHHHHHHHh--------CCCCCEEEEEhhhhHHHHHHHHHc---CCc
Confidence 45778999999999999995 455555555 5665544433 356789999999999998887653 233
Q ss_pred EEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCcc
Q 012991 157 SVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIK 236 (452)
Q Consensus 157 ~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~ 236 (452)
.+ .+ +..+ +++|++.++......+++.+|++++++|++|.+.|+++|.++|+++|+ ++++|++|+.|..+
T Consensus 119 ~~-~~----~~~d----~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~-~livDea~~~G~~g 188 (370)
T PRK05937 119 HQ-SF----RHND----LDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHA-HLIVDEAHAMGIFG 188 (370)
T ss_pred eE-Ee----cCCC----HHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCC-EEEEECCccccccC
Confidence 33 23 3222 577777775322112456788899999999999999999999999999 89999999998876
Q ss_pred cccc----ccC---ccEEEEcCcccCcCCCCcEEEEEecCccccCCC---CCceeccCCCCcccccccccccCccccccH
Q 012991 237 IDVK----EIG---ADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMH---HPVVSHEFGNGLPIESAWIGTRDYSAQLVI 306 (452)
Q Consensus 237 ~~~~----~~~---~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (452)
.+.. .++ .++++.|++|. +|+.|.|+++. ++.... +. .++. +.++.+...+.++
T Consensus 189 ~~g~g~~~~~~~~~~~~~~~tlsK~-~g~~G~~vl~~-~~~~~~-~~~~~~~~~-------------~s~~~~~~~~~a~ 252 (370)
T PRK05937 189 DDGKGFCHSLGYENFYAVLVTYSKA-LGSMGAALLSS-SEVKQD-LMLNSPPLR-------------YSTGLPPHLLISI 252 (370)
T ss_pred CCCCchHHhhCCCCCcEEEEechhh-hhcCceEEEcC-HHHHHH-HHHhCCCCe-------------ecCCCCHHHHHHH
Confidence 6542 222 23667889995 78888776654 433322 11 1110 1123344456777
Q ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcce
Q 012991 307 PSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGV 386 (452)
Q Consensus 307 ~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI 386 (452)
.++++++.+. + +..+++++++++++.+.|... .+ +....+.++ +.+...+.+.|.++ ||
T Consensus 253 ~aal~~l~~~--~-~~~~~~l~~l~~~l~~~l~~~------~~----~~~~~i~~~-------~~~~~~~~~~L~~~-gi 311 (370)
T PRK05937 253 QVAYDFLSQE--G-ELARKQLFRLKEYFAQKFSSA------AP----GCVQPIFLP-------GISEQELYSKLVET-GI 311 (370)
T ss_pred HHHHHHHHhC--c-HHHHHHHHHHHHHHHHhcCCC------CC----CCEEEEEeC-------ChhHHHHHHHHHHC-Ce
Confidence 8888888753 5 556777888888887766421 11 112224443 23456788888664 99
Q ss_pred EeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 387 EVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 387 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
.+...+.+ ..+++|+|++.++|++||++++++|+++++.
T Consensus 312 ~v~~~~~~-----------------~~~~iRis~~~~~t~edid~l~~~L~~~~~~ 350 (370)
T PRK05937 312 RVGVVCFP-----------------TGPFLRVNLHAFNTEDEVDILVSVLATYLEK 350 (370)
T ss_pred eEEeeCCC-----------------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 98754432 2358999999999999999999999998864
No 116
>PLN02656 tyrosine transaminase
Probab=99.95 E-value=4.5e-26 Score=226.42 Aligned_cols=343 Identities=11% Similarity=0.072 Sum_probs=228.4
Q ss_pred CCCCeEEeccCCCC-----CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhC------CCCCCcEEEe
Q 012991 36 HQHGVARINNGSFG-----SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLIN------ADDVGEISLV 104 (452)
Q Consensus 36 ~~~~~~~l~~~~~~-----~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~~i~~t 104 (452)
.+.+++.|+.|.+. +.|+.+.+++.+.+... ....|....+..++|++++++++ ++ +++|++|
T Consensus 29 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-~~~i~~t 102 (409)
T PLN02656 29 NGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSN-----KFNGYAPTVGLPQARRAIAEYLSRDLPYKLS-LDDVFIT 102 (409)
T ss_pred cCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcC-----CCCCCCCCCCCHHHHHHHHHHHHHhcCCCCC-cccEEEe
Confidence 56789999999885 56788888888766431 11234444567778888888874 33 6899999
Q ss_pred cChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhc
Q 012991 105 DNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEK 183 (452)
Q Consensus 105 ~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~ 183 (452)
+|+++|+.+++.++ +++||+|++++|.|+...... ...|++++.+++.. ++...+ ++.+++.+
T Consensus 103 ~G~~~al~~~~~~l--------~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~i~~~~--~~~~~~d~~~l~~~~-- 166 (409)
T PLN02656 103 SGCTQAIDVALSML--------ARPGANILLPRPGFPIYELCA----AFRHLEVRYVDLLP--EKGWEVDLDAVEALA-- 166 (409)
T ss_pred CChHHHHHHHHHHH--------hCCCCeEEEeCCCCCcHHHHH----HHcCCEEEEEeCCC--cCCCCCCHHHHHHHh--
Confidence 99999999999976 489999999999998654333 44699999996521 122234 78888888
Q ss_pred cccCCCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCc------cc-cccccCccEEEEcCcc
Q 012991 184 GKKDGKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSI------KI-DVKEIGADFYVSNLHK 253 (452)
Q Consensus 184 ~~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~------~~-~~~~~~~d~~~~s~~K 253 (452)
.+++++|++++|+||||.+++ +++|+++|+++++ ++|+|++++.... ++ .+.....-+++.|++|
T Consensus 167 ----~~~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~-~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK 241 (409)
T PLN02656 167 ----DQNTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKI-LVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSK 241 (409)
T ss_pred ----ccCceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCC-EEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccch
Confidence 567899999999999999975 6678899999999 7999999863221 11 1111223477889999
Q ss_pred cCcCCCC--cEEEEEec--------CccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHH
Q 012991 254 WFFCPPS--VAFLYCRK--------SILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGI 323 (452)
Q Consensus 254 ~l~g~~G--~G~l~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~ 323 (452)
. ++.+| +|++++.+ +++.. + ... ... .+.++...+.++..+++.... ..++..
T Consensus 242 ~-f~~pGlRiG~~i~~~~~~~~~~~~~~~~-~-~~~-----------~~~-~~~~s~~~q~a~~~~l~~~~~--~~~~~~ 304 (409)
T PLN02656 242 R-WIVPGWRLGWFVTTDPSGSFRDPKIVER-I-KKY-----------FDI-LGGPATFIQAAVPTILEQTDE--SFFKKT 304 (409)
T ss_pred h-ccCcceeEEEEEEeCcccccccHHHHHH-H-HHH-----------Hhh-hcCCCHHHHHHHHHHHhcCcH--HHHHHH
Confidence 5 66677 88888742 33332 1 000 000 012233333333333331000 136667
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCc-CCCcccccceEEEEcCCccccCChhhHHHHH-HHHhhhcceEeeecccCCCCCCCC
Q 012991 324 MQRNHEQALKMARMLANAWGTSL-GSPPEICAAMVMVGLPSRLRVMGEDDALRLR-GHLRVRFGVEVPIHYQAPKDDGQP 401 (452)
Q Consensus 324 ~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~L~~~~gI~v~~~~~~~~~~~~~ 401 (452)
+++++++++.+.+.|..++++.. ..|.+ +.++|+.++.... .+..+..++. +.| ++.||.+.++..+
T Consensus 305 ~~~~~~~r~~~~~~L~~~~~~~~~~~p~g--g~~~w~~l~~~~~-~~~~~~~~~~~~~l-~~~gV~v~pg~~f------- 373 (409)
T PLN02656 305 INILKQSSDICCDRIKEIPCITCPHKPEG--SMAVMVKLNLSLL-EDISDDIDFCFKLA-REESVIILPGTAV------- 373 (409)
T ss_pred HHHHHHHHHHHHHHHhhCCCCcCCcCCCe--EEEEEEecchhhc-CCCCCHHHHHHHHH-HhCCEEEecchhc-------
Confidence 77788888889999987644432 23333 7788888752100 0011233444 455 4469999876554
Q ss_pred CCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhccc
Q 012991 402 QAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEEGQ 444 (452)
Q Consensus 402 ~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~~~ 444 (452)
..++++||+++. +.++++..++.|++++....
T Consensus 374 ---------g~~~~iRi~~~~--~~e~l~eal~rl~~~~~~~~ 405 (409)
T PLN02656 374 ---------GLKNWLRITFAA--DPSSLEEALGRIKSFYLRHS 405 (409)
T ss_pred ---------CCCCeEEEEeCC--CHHHHHHHHHHHHHHHHHhc
Confidence 225799999995 78889999999999887543
No 117
>PRK08363 alanine aminotransferase; Validated
Probab=99.95 E-value=4.8e-26 Score=225.83 Aligned_cols=342 Identities=13% Similarity=0.117 Sum_probs=224.4
Q ss_pred CCCCeEEeccCCCC----CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh----C--CCCCCcEEEec
Q 012991 36 HQHGVARINNGSFG----SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI----N--ADDVGEISLVD 105 (452)
Q Consensus 36 ~~~~~~~l~~~~~~----~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~--~~~~~~i~~t~ 105 (452)
.+.+++.|+.+.++ +.|+.+.+++.+.+... .. .|....+..++|+++++++ | + ++++|++|+
T Consensus 28 ~~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~----~~--~Y~~~~g~~~lr~~ia~~~~~~~g~~~-~~~~i~it~ 100 (398)
T PRK08363 28 KGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEG----HN--YYGPSEGLPELREAIVKREKRKNGVDI-TPDDVRVTA 100 (398)
T ss_pred cCCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcC----CC--CCCCCCCcHHHHHHHHHHHHHhcCCCC-ChhhEEEeC
Confidence 45689999988873 46777888887765421 11 2334456788888888887 3 4 368999999
Q ss_pred ChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCC-hHHH-HHHHHHHHhc
Q 012991 106 NATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLAS-EEEI-INEFKKGIEK 183 (452)
Q Consensus 106 g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~-~~~~-~~~l~~~i~~ 183 (452)
|+++|+.+++.++ +++||+|++++|+|.+....+ ...|.+++.++. .++ ...+ .+.+++.+
T Consensus 101 G~~~al~~~~~~~--------~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~v~~~~---~~~~~~~~d~~~l~~~~-- 163 (398)
T PRK08363 101 AVTEALQLIFGAL--------LDPGDEILIPGPSYPPYTGLV----KFYGGVPVEYRT---IEEEGWQPDIDDIRKKI-- 163 (398)
T ss_pred CHHHHHHHHHHHh--------CCCCCEEEEcCCCCcchHHHH----HHcCCEEEEecc---ccccCCcCCHHHHHhhC--
Confidence 9999999999876 589999999999999875543 456887777631 111 1223 78888888
Q ss_pred cccCCCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCcc------ccccccCccEEEEcCccc
Q 012991 184 GKKDGKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSIK------IDVKEIGADFYVSNLHKW 254 (452)
Q Consensus 184 ~~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~~------~~~~~~~~d~~~~s~~K~ 254 (452)
.+++++|++++++||||..++ +++|.++|+++|+ ++|+|++++..... ..+......+++.|++|+
T Consensus 164 ----~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~-~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~ 238 (398)
T PRK08363 164 ----TEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDL-PVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKV 238 (398)
T ss_pred ----CcceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCe-EEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhc
Confidence 567899999999999999998 7788999999999 79999997642211 111111124667899996
Q ss_pred CcCCCC--cEEEEE--ecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHH
Q 012991 255 FFCPPS--VAFLYC--RKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQ 330 (452)
Q Consensus 255 l~g~~G--~G~l~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~ 330 (452)
++.+| +|++++ ++++++. +....... ... ....+...+.++..++....+ .++..+++++++
T Consensus 239 -~~~~GlRiG~~~~~~~~~~~~~-l~~~~~~~-------~~~--~~~~s~~~q~~~~~~l~~~~~---~l~~~~~~~~~~ 304 (398)
T PRK08363 239 -YFATGWRLGYIYFVDPEGKLAE-VREAIDKL-------ARI--RLCPNTPAQFAAIAGLTGPMD---YLEEYMKKLKER 304 (398)
T ss_pred -cCCccceEEEEEEeCcHHHHHH-HHHHHHHH-------hcc--cccCChHHHHHHHHHHhCChH---HHHHHHHHHHHH
Confidence 55555 788887 4444432 11110000 000 011222233333333322111 356667778888
Q ss_pred HHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCC
Q 012991 331 ALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDG 410 (452)
Q Consensus 331 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~ 410 (452)
++.+.+.|.+++++.+..|.. +.++|+.++.. ...+..+++..+.+++||.+.++..+..
T Consensus 305 ~~~l~~~L~~~~~~~~~~p~g--~~~~~~~l~~~----~~~~~~~~~~~~l~~~gV~v~~g~~f~~-------------- 364 (398)
T PRK08363 305 RDYIYKRLNEIPGISTTKPQG--AFYIFPRIEEG----PWKDDKEFVLDVLHEAHVLFVHGSGFGE-------------- 364 (398)
T ss_pred HHHHHHHHhcCCCCEecCCCe--EEEEEEEeccC----CCCCHHHHHHHHHHhCCEEEeCchhhCC--------------
Confidence 889999998876766655443 55666677521 0113345544443446999977665421
Q ss_pred CccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 411 IITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 411 ~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
..++++|+++.. +.++++..++.|++++..
T Consensus 365 ~~~~~iRis~~~--~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 365 YGAGHFRLVFLP--PVEILEEAMDRFEEFMRE 394 (398)
T ss_pred CCCCeEEEEecC--CHHHHHHHHHHHHHHHHH
Confidence 235799999963 788899999999988765
No 118
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.95 E-value=1.1e-26 Score=230.96 Aligned_cols=351 Identities=15% Similarity=0.135 Sum_probs=231.1
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHHh--cCCchh-h-hhhhhHHHHH-HHHHHHhHhCCCCCCcEEEecChhHHHH
Q 012991 38 HGVARINNGSFGSCPKSVLADQQKWQLKFL--QQPDDF-Y-FNSLRKGILE-SRAAVKDLINADDVGEISLVDNATTAAA 112 (452)
Q Consensus 38 ~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~--~~~~~~-~-~~~~~~~~~~-~~~~la~~~~~~~~~~i~~t~g~t~a~~ 112 (452)
.+.+.|..+ .+..++.|++++...+.... ++++.. + +....+.+++ +++.+++++|++ ...+++ +|||+|+.
T Consensus 19 ~~~~~~~~~-~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~-~~~v~~-~sgt~a~~ 95 (402)
T cd00378 19 RETLELIAS-ENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE-YANVQP-HSGSQANL 95 (402)
T ss_pred HhCeeeecc-CCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC-ceeeec-CCcHHHHH
Confidence 456777644 55557779999987653222 222222 1 1222233344 677889999996 344444 46789999
Q ss_pred HHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHH-HHHhcCcEEEEEeCCCCCCC-hHHH-HHHHHHHHhccccCCC
Q 012991 113 IVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQA-YVTRAGGSVVEVQLPFPLAS-EEEI-INEFKKGIEKGKKDGK 189 (452)
Q Consensus 113 ~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~-~a~~~g~~v~~~~~~~~~~~-~~~~-~~~l~~~i~~~~~~~~ 189 (452)
.++.++ +++||+|++++++|.++...+.. .++..|.++..++++ .+. ++.+ ++++++.++ .+
T Consensus 96 ~~l~~l--------~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~id~~~l~~~i~-----~~ 160 (402)
T cd00378 96 AVYFAL--------LEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYG--VDPETGLIDYDALEKMAL-----EF 160 (402)
T ss_pred HHHHHh--------cCCCCEEEEecCccCccccccccccccccceeEEEecCC--cCcccCCcCHHHHHHHHH-----hC
Confidence 999987 58999999999999876443211 124457777777552 221 3455 899999885 35
Q ss_pred ceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCc-----cccccccCccEEEEcCcccCcCCCCcEEE
Q 012991 190 MIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSI-----KIDVKEIGADFYVSNLHKWFFCPPSVAFL 264 (452)
Q Consensus 190 ~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~-----~~~~~~~~~d~~~~s~~K~l~g~~G~G~l 264 (452)
++++|+++++++ |...|+++|+++|+++|+ ++|+|++|+.|.. +.++. ++|++++|+|||+.|+.| |++
T Consensus 161 ~~~~v~~~~~~~--~~~~~~~~I~~l~~~~~~-~li~D~a~~~g~~~~g~~~~~~~--~~dv~~~s~sK~l~G~~g-g~i 234 (402)
T cd00378 161 KPKLIVAGASAY--PRPIDFKRFREIADEVGA-YLLVDMAHVAGLVAGGVFPNPLP--GADVVTTTTHKTLRGPRG-GLI 234 (402)
T ss_pred CCCEEEecCccc--CCCcCHHHHHHHHHhcCC-EEEEEccchhhhhhcccCCCccc--CCcEEEeccccCCCCCCc-eEE
Confidence 788999888765 567799999999999999 7999999876543 22333 579999999999878886 666
Q ss_pred EEec-CccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcC
Q 012991 265 YCRK-SILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWG 343 (452)
Q Consensus 265 ~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~ 343 (452)
+.++ ++.+. +..... ....+++....+.++..++...... +.+..+++++++++++.+.|.+. |
T Consensus 235 ~~~~~~~~~~-l~~~~~-----------~~~~~~~~~~~~~a~~~al~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g 299 (402)
T cd00378 235 LTRKGELAKK-INSAVF-----------PGLQGGPHLHVIAAKAVALKEALEP--EFKAYAKQVVENAKALAEALKER-G 299 (402)
T ss_pred EeccHHHHHH-HHHHhC-----------ccccCCchHHHHHHHHHHHHHHhhH--HHHHHHHHHHHHHHHHHHHHHhC-C
Confidence 6766 66554 211000 0011333333444444455544321 45677888999999999999887 7
Q ss_pred CCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEeccccc
Q 012991 344 TSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVY 423 (452)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~ 423 (452)
+.+...+. .++++|+.++. .+.+...+.+.|.+ +||.+.....+..... ...+.++|++++..
T Consensus 300 ~~~~~~~~-~~~~v~v~~~~-----~~~~~~~~~~~l~~-~gI~v~~~~~p~~~~~----------~~~~~~lRi~~~~~ 362 (402)
T cd00378 300 FKVVSGGT-DNHLVLVDLRP-----KGITGKAAEDALEE-AGITVNKNTLPWDPSS----------PFVPSGIRIGTPAM 362 (402)
T ss_pred CeEeecCC-CCeEEEEeCCc-----cCCCHHHHHHHHHH-cCcEEcCCcCCCCCCC----------CCCCCeeEecCHHH
Confidence 77653222 27788888752 12345567777754 6999965443322100 01346899999775
Q ss_pred C----CHHHHHHHHHHHHHHHhccc
Q 012991 424 N----TLEDYEKFRDAVILLVEEGQ 444 (452)
Q Consensus 424 ~----t~~di~~l~~~l~~~~~~~~ 444 (452)
+ +.+||+.+++.|++++.+.+
T Consensus 363 ~~~~~~~~di~~~~~~l~~~~~~~~ 387 (402)
T cd00378 363 TTRGMGEEEMEEIADFIARALKDAE 387 (402)
T ss_pred HHhCCCHHHHHHHHHHHHHHHhccc
Confidence 4 69999999999999998776
No 119
>PRK08175 aminotransferase; Validated
Probab=99.95 E-value=8.8e-26 Score=223.61 Aligned_cols=343 Identities=15% Similarity=0.133 Sum_probs=229.4
Q ss_pred CCCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh----CCC-CCC-cEEEecChh
Q 012991 36 HQHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI----NAD-DVG-EISLVDNAT 108 (452)
Q Consensus 36 ~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~-~~~-~i~~t~g~t 108 (452)
.+.+++.|+.+.+. ..|+.+.+.+.+.... . ..+.|....+..++|+++++++ |.+ +++ ++++|+|++
T Consensus 27 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~----~-~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~ 101 (395)
T PRK08175 27 RGEDIIDFSMGNPDGPTPPHIVEKLCEVAQR----P-DTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSK 101 (395)
T ss_pred cCCCeEEcCCCCCCCCCCHHHHHHHHHHHhC----C-CcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcH
Confidence 45778899877665 3455566666554421 1 1123444455677777777765 432 245 799999999
Q ss_pred HHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCC
Q 012991 109 TAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDG 188 (452)
Q Consensus 109 ~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~ 188 (452)
+++.+++.++ +++||+|++++|.|+.....+.. .|.++..++++ .++.+.++++++++.. .
T Consensus 102 ~~l~~~~~~~--------~~~gd~Vlv~~P~y~~~~~~~~~----~g~~~~~v~~~----~~~~~~~~l~~~l~~~---~ 162 (395)
T PRK08175 102 EGLAHLMLAT--------LDHGDTVLVPNPSYPIHIYGAVI----AGAQVRSVPLV----EGVDFFNELERAIRES---Y 162 (395)
T ss_pred HHHHHHHHHh--------CCCCCEEEEcCCCCcchHHHHHH----cCCeEEEEecc----cCCCcHHHHHHHHhhc---c
Confidence 9999988866 58999999999999987666543 59999988652 2222367788777532 3
Q ss_pred CceEEEEEeccCCCCcccccH---HHHHHHHHHcCCCEEEEecccccCCc----cccccc----cCccEEEEcCcccCcC
Q 012991 189 KMIRLAIIDHITSMPCVVIPV---RKLVKICRDEGVDQVFVDAAHAMGSI----KIDVKE----IGADFYVSNLHKWFFC 257 (452)
Q Consensus 189 ~~~~lv~~~~~~n~tG~~~~l---~~i~~l~~~~~~~~~ivD~a~~~g~~----~~~~~~----~~~d~~~~s~~K~l~g 257 (452)
+++++|++++|+||||.+++. ++|+++|+++|+ ++|+|++++.... ...+.. .+..+++.|++|. +|
T Consensus 163 ~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i-~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~g 240 (395)
T PRK08175 163 PKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDV-LVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKS-YN 240 (395)
T ss_pred CCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCc-EEEEecchHhhccCCCCCcchhcCCCcccCEEEEeecccc-cc
Confidence 578999999999999999987 688899999999 7999998753221 111111 1234677899996 56
Q ss_pred CCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 012991 258 PPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMA 335 (452)
Q Consensus 258 ~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~ 335 (452)
.+| +|+++.++++++. +. ... .....+.+...+.+...+++.... -++.++++++++++++.
T Consensus 241 ~pGlRiG~~~~~~~l~~~-~~-~~~-----------~~~~~~~~~~~q~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~ 304 (395)
T PRK08175 241 MAGWRIGFMVGNPELVSA-LA-RIK-----------SYHDYGTFTPLQVAAIAALEGDQQ---CVRDIAEQYKRRRDVLV 304 (395)
T ss_pred CcchhheeeeCCHHHHHH-HH-HHH-----------hhcccCCCcHHHHHHHHHHhCcHH---HHHHHHHHHHHHHHHHH
Confidence 666 7999888877765 21 110 000011222222222233322111 25667778888889999
Q ss_pred HHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccce
Q 012991 336 RMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGY 415 (452)
Q Consensus 336 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (452)
+.|.+. ++.+..+.+ ++++|+.+++.. ...++.++++.|.++.||.+.++..+.. ..+++
T Consensus 305 ~~L~~~-~~~~~~p~~--g~~i~i~l~~~~---~~~~~~~~~~~l~~~~gv~v~p~~~f~~--------------~~~~~ 364 (395)
T PRK08175 305 KGLHEA-GWMVEMPKA--SMYVWAKIPEPY---AAMGSLEFAKKLLNEAKVCVSPGIGFGD--------------YGDTH 364 (395)
T ss_pred HHHHHc-CCcccCCCE--EEEEEEECCccc---CCCCHHHHHHHHHHhCCEEEeCchhhCc--------------CCCCe
Confidence 999887 666554444 789999987311 0124678888776557999977655422 23569
Q ss_pred EEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 416 ARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 416 iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
+|+++. .+.+.++..++.|++++.+
T Consensus 365 lRis~~--~~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 365 VRFALI--ENRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred EEEEeC--CCHHHHHHHHHHHHHHHHh
Confidence 999997 3788899999999998865
No 120
>PRK07908 hypothetical protein; Provisional
Probab=99.95 E-value=6e-26 Score=221.22 Aligned_cols=319 Identities=18% Similarity=0.185 Sum_probs=219.3
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHH
Q 012991 37 QHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVL 115 (452)
Q Consensus 37 ~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~ 115 (452)
+++++.|+.+... ..|+.+.+++.+.+..... |.......++|++++++++++ +++|++|+|+++++.+++
T Consensus 21 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------Y~~~~g~~~lr~aia~~~~~~-~~~I~it~Ga~~al~~~~ 92 (349)
T PRK07908 21 GPGLLDFAVNVRHDTPPEWLRERLAARLGDLAA-------YPSTEDERRARAAVAARHGRT-PDEVLLLAGAAEGFALLA 92 (349)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHhhHhhc-------CCCccchHHHHHHHHHHhCcC-hhhEEECCCHHHHHHHHH
Confidence 5678999887764 5677789999887654322 222345788999999999996 899999999999999887
Q ss_pred HHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEE
Q 012991 116 QQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLA 194 (452)
Q Consensus 116 ~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv 194 (452)
. + ++ +.+++..|+|...... ++..|.+++.+++ +++..+ .+ .+ .++++++
T Consensus 93 ~-l---------~~-~~viv~~P~y~~~~~~----~~~~G~~i~~v~~----~~~~~~d~~----~l------~~~~~~i 143 (349)
T PRK07908 93 R-L---------RP-RRAAVVHPSFTEPEAA----LRAAGIPVHRVVL----DPPFRLDPA----AV------PDDADLV 143 (349)
T ss_pred h-c---------CC-CeEEEeCCCChHHHHH----HHHcCCEEEeecc----CcccCcChh----Hh------ccCCCEE
Confidence 7 4 45 4566778888765443 4557999999854 322222 33 23 3567899
Q ss_pred EEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC--Cccccccc--cCccEEEEcCcccCcCCCC--cEEEEEec
Q 012991 195 IIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG--SIKIDVKE--IGADFYVSNLHKWFFCPPS--VAFLYCRK 268 (452)
Q Consensus 195 ~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g--~~~~~~~~--~~~d~~~~s~~K~l~g~~G--~G~l~~~~ 268 (452)
++++++||||.++|.++|.++|++ +. ++|+|++++.- ....++.. .+..+++.|+||. +|++| +|+++.++
T Consensus 144 ~l~np~NPTG~~~~~~~l~~l~~~-~~-~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~-~~l~GlRiG~~~~~~ 220 (349)
T PRK07908 144 VIGNPTNPTSVLHPAEQLLALRRP-GR-ILVVDEAFADAVPGEPESLAGDDLPGVLVLRSLTKT-WSLAGLRVGYALGAP 220 (349)
T ss_pred EEcCCCCCCCCCcCHHHHHHHHhc-CC-EEEEECcchhhccCCccccccccCCCEEEEeecccc-cCCccceeeeeecCH
Confidence 999999999999999999999975 78 68899998531 11222211 1223566699995 66666 69999888
Q ss_pred CccccCCCCCceeccCCCCcccccccccccCccccccHHHHHH-HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcC
Q 012991 269 SILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVT-FVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLG 347 (452)
Q Consensus 269 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~-~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 347 (452)
++++. + ...... ...+...+.++...++ .... .++.++++++++++++.+.|.++ ++++.
T Consensus 221 ~~~~~-~-~~~~~~-------------~~~~~~~~~a~~~~~~~~~~~---~~~~~~~~~~~~r~~l~~~L~~~-~~~~~ 281 (349)
T PRK07908 221 DVLAR-L-TRGRAH-------------WPVGTLQLEAIAACCAPRAVA---EAAADAARLAADRAEMVAGLRAV-GARVV 281 (349)
T ss_pred HHHHH-H-HhcCCC-------------CCccHHHHHHHHHHhcccchH---HHHHHHHHHHHHHHHHHHHHHhC-CcEec
Confidence 77765 2 111000 0111112222222211 0001 25567788889999999999887 77766
Q ss_pred CCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHH
Q 012991 348 SPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLE 427 (452)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~ 427 (452)
.|+. ++++|+.++ +...+.+.|.+ +||.+..+..+.. ..++++|||++ +.+
T Consensus 282 ~p~~--g~~~~~~~~---------~~~~~~~~l~~-~gI~v~~g~~f~~--------------~~~~~vRis~~---~~~ 332 (349)
T PRK07908 282 DPAA--APFVLVRVP---------DAELLRKRLRE-RGIAVRRGDTFPG--------------LDPDYLRLAVR---PRA 332 (349)
T ss_pred cCCC--ceEEEEECC---------cHHHHHHHHHh-CCEEEEECCCCCC--------------CCCCeEEEEeC---CCc
Confidence 6554 889999886 24578888865 5999987654421 23579999996 789
Q ss_pred HHHHHHHHHHHHHhcc
Q 012991 428 DYEKFRDAVILLVEEG 443 (452)
Q Consensus 428 di~~l~~~l~~~~~~~ 443 (452)
|+++++++|++++..+
T Consensus 333 ~~~~l~~al~~~~~~~ 348 (349)
T PRK07908 333 EVPVLVQALAEILKAG 348 (349)
T ss_pred cHHHHHHHHHHHHhcc
Confidence 9999999999987654
No 121
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.95 E-value=7.7e-26 Score=226.52 Aligned_cols=327 Identities=14% Similarity=0.065 Sum_probs=219.1
Q ss_pred eEEeccCCCCC-CcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhC--CCCCCcEEEecChhHHHHHHHH
Q 012991 40 VARINNGSFGS-CPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLIN--ADDVGEISLVDNATTAAAIVLQ 116 (452)
Q Consensus 40 ~~~l~~~~~~~-~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~~~i~~t~g~t~a~~~~~~ 116 (452)
++.|+.+.+.. .++.+.+++.+..... ..|....+..++++.++++++ ...+++|++|+|+++++.+++.
T Consensus 87 ~i~L~~g~p~~~~~p~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~ 159 (431)
T PRK15481 87 LHDLAGGNPDPQRLPDLSRYFARLSRTP-------RLYGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLC 159 (431)
T ss_pred hhhhhcCCCChhHhHHHHHHHHHhhhhh-------hhcCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHH
Confidence 34555444432 2233555555433211 123334456778888998876 3224699999999999999999
Q ss_pred HhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEE
Q 012991 117 QIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAII 196 (452)
Q Consensus 117 ~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~ 196 (452)
++ +++||.|++++|.|......+ +..|++++.+++ ++++..++.++++++ .+++++++
T Consensus 160 ~l--------~~pgd~Vlv~~P~y~~~~~~~----~~~g~~~~~v~~----~~~g~~~~~l~~~~~------~~~k~i~~ 217 (431)
T PRK15481 160 AH--------LLPGDSVAVEDPCFLSSINML----RYAGFSASPVSV----DAEGMQPEKLERALA------QGARAVIL 217 (431)
T ss_pred Hh--------CCCCCEEEEeCCCcHHHHHHH----HHcCCeEEeecc----CCCCCCHHHHHHHHh------cCCCEEEE
Confidence 87 589999999999998876555 446999999954 333322889999883 46788777
Q ss_pred e-ccCCCCcccccHH---HHHHHHHHc-CCCEEEEecccccCCc----c-ccccccCccEEEEcCcccCcCCCC--cEEE
Q 012991 197 D-HITSMPCVVIPVR---KLVKICRDE-GVDQVFVDAAHAMGSI----K-IDVKEIGADFYVSNLHKWFFCPPS--VAFL 264 (452)
Q Consensus 197 ~-~~~n~tG~~~~l~---~i~~l~~~~-~~~~~ivD~a~~~g~~----~-~~~~~~~~d~~~~s~~K~l~g~~G--~G~l 264 (452)
+ +++||||.+++.+ +|.++|+++ ++ ++|+|++++.... + +.. ...-.+++.|+||. +| +| +|++
T Consensus 218 ~p~p~NPTG~~~s~~~~~~l~~la~~~~~~-~ii~De~Y~~~~~~~~~~~~~~-~~~~vi~~~SfSK~-~~-~GlRiG~~ 293 (431)
T PRK15481 218 TPRAHNPTGCSLSARRAAALRNLLARYPQV-LVIIDDHFALLSSSPYHSVIPQ-TTQRWALIRSVSKA-LG-PDLRLAFV 293 (431)
T ss_pred CCCCCCCCCccCCHHHHHHHHHHHHhcCCc-eEEecCchhhhccCCCCCCCcC-CCCCEEEEeeeccc-cC-CCceeEEE
Confidence 6 9999999999976 889999999 99 7999998763211 1 111 11234788899996 55 56 8888
Q ss_pred EEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHh--hcCHHHHHHHHHHHHHHHHHHHHHHc
Q 012991 265 YCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRF--EGGIDGIMQRNHEQALKMARMLANAW 342 (452)
Q Consensus 265 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~--~~g~~~~~~~~~~~~~~l~~~L~~~~ 342 (452)
+.+++++.. + ..... . .....+...+ .++..++... ..-++.+++.+++.++.+.+.|.+.
T Consensus 294 i~~~~~~~~-~-~~~~~----------~-~~~~~s~~~q---~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~- 356 (431)
T PRK15481 294 ASDSATSAR-L-RLRLN----------S-GTQWVSHLLQ---DLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY- 356 (431)
T ss_pred eCCHHHHHH-H-HHHHh----------c-cccCCCHHHH---HHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-
Confidence 888777664 2 11100 0 0011222233 3333333321 0014567788888899999999886
Q ss_pred CCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccc
Q 012991 343 GTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQV 422 (452)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 422 (452)
++.+..|.+ ++++|+.+++ +..++.+.|.+ +||.+.++..+... ...+++|||++.
T Consensus 357 ~~~~~~p~g--g~f~~~~l~~--------~~~~~~~~l~~-~gV~v~pg~~f~~~-------------~~~~~iRis~~~ 412 (431)
T PRK15481 357 GIAIPSPGD--GLNLWLPLDT--------DSQATALTLAK-SGWLVREGEAFGVS-------------APSHGLRITLST 412 (431)
T ss_pred CCccccCCC--eEEEEEECCC--------CHHHHHHHHHH-CCcEEecCCccccC-------------CCCCeEEEEcCC
Confidence 666545554 8899998861 35678888865 59999876654211 224689999986
Q ss_pred cCCHHHHHHHHHHHHHHHh
Q 012991 423 YNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 423 ~~t~~di~~l~~~l~~~~~ 441 (452)
. +.++++.+++.|++++.
T Consensus 413 ~-~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 413 L-NDAEINRLAADLHQALN 430 (431)
T ss_pred C-ChHHHHHHHHHHHHHhc
Confidence 3 58899999999998764
No 122
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.95 E-value=4.7e-25 Score=219.13 Aligned_cols=341 Identities=13% Similarity=0.106 Sum_probs=229.1
Q ss_pred CCeE-EeccCCCCC-CcHHHHHHHHHHHHHHhcCCchh-hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHH
Q 012991 38 HGVA-RINNGSFGS-CPKSVLADQQKWQLKFLQQPDDF-YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIV 114 (452)
Q Consensus 38 ~~~~-~l~~~~~~~-~p~~v~e~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~ 114 (452)
+.++ +.+++..+. ..++|.+++.+.+..+....+.. ......+..+++++++++++|.+ ..++.++|++|+..+
T Consensus 45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~---~~~~~~SG~~An~~a 121 (406)
T PRK13393 45 REVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGKE---AALLFTSGYVSNWAA 121 (406)
T ss_pred ccEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCCC---cEEEeCCcHHHHHHH
Confidence 3444 445555664 56779999999988764322221 11223456799999999999973 556666667799999
Q ss_pred HHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEE
Q 012991 115 LQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLA 194 (452)
Q Consensus 115 ~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv 194 (452)
+.++++ ..+++.|+++...|.++..++.. .|.+++.+ +..+ .+.+++.++... .+++++|
T Consensus 122 i~~l~~------~~~g~~I~~~~~~H~s~~~~~~~----~g~~~~~~----~~~d----~~~l~~~l~~~~--~~~~~~v 181 (406)
T PRK13393 122 LSTLGS------RLPGCVILSDELNHASMIEGIRH----SRAEKRIF----RHND----PADLERKLSDLD--PHRPKLV 181 (406)
T ss_pred HHHhhc------CCCCCEEEEccchhHHHHHHHHH----cCCeEEEe----CCCC----HHHHHHHHHhcc--CCCCEEE
Confidence 887742 23678888888899988877743 47777777 3333 355555554220 2468899
Q ss_pred EEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCcc-c-----ccc--ccCccEEEEcCcccCcCCCCcEEEEE
Q 012991 195 IIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIK-I-----DVK--EIGADFYVSNLHKWFFCPPSVAFLYC 266 (452)
Q Consensus 195 ~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~-~-----~~~--~~~~d~~~~s~~K~l~g~~G~G~l~~ 266 (452)
++++++|++|.+.|+++|.++|+++|+ ++++|++|+.|... . ... ...+|+++.+++|. +|..| |+++.
T Consensus 182 ~~~~v~~~~G~~~~l~~i~~l~~~~~~-~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa-~g~~G-G~~~~ 258 (406)
T PRK13393 182 AFESVYSMDGDIAPIAEICDVAEKHGA-MTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKA-FGVMG-GYITG 258 (406)
T ss_pred EEcCCCCCCCchhCHHHHHHHHHHcCC-EEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchh-hcccC-ceeeC
Confidence 999999999999999999999999999 89999999866531 1 101 11357888899997 56666 78777
Q ss_pred ecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 012991 267 RKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSL 346 (452)
Q Consensus 267 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~ 346 (452)
++++++. + .... . ...+.++.+.....+..++++.+.+. + ..+++.+++.+++.+.|.++ ++.+
T Consensus 259 ~~~~~~~-l-~~~~-----~----~~~~t~~~~p~~~aa~~aaL~~~~~~--~--~~~~~~~~~~~~l~~~L~~~-g~~~ 322 (406)
T PRK13393 259 SAALCDF-I-RSFA-----S----GFIFTTSLPPAVAAGALASVRHLKAS--S--AERERHQDRVARLRARLDKA-GIPH 322 (406)
T ss_pred CHHHHHH-H-HHhC-----c----CceecCccCHHHHHHHHHHHHHHhhC--H--HHHHHHHHHHHHHHHHHHHc-CCCc
Confidence 7766554 1 1110 0 00012333434455666777776642 2 22456778899999999876 6665
Q ss_pred CCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCH
Q 012991 347 GSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTL 426 (452)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~ 426 (452)
..+. ++++.+.+. +..++.++.+.|.+++||.++....+.. ....+.+|++++.++|.
T Consensus 323 ~~~~---~~i~~v~~~------~~~~~~~l~~~L~~~~Gi~v~~~~~p~~-------------p~g~~~iRis~~~~~t~ 380 (406)
T PRK13393 323 LPNP---SHIVPVMVG------DPVLCKQISDELLDRYGIYVQPINYPTV-------------PRGTERLRITPSPLHTD 380 (406)
T ss_pred CCCC---CCeEEEEeC------CHHHHHHHHHHHHHhCCEEEEeECCCCC-------------CCCCceEEEEECCCCCH
Confidence 5332 456555443 2235678888887656999976433311 12236899999999999
Q ss_pred HHHHHHHHHHHHHHhc
Q 012991 427 EDYEKFRDAVILLVEE 442 (452)
Q Consensus 427 ~di~~l~~~l~~~~~~ 442 (452)
+|+++++++|+++++.
T Consensus 381 edid~l~~~l~~~~~~ 396 (406)
T PRK13393 381 ADIEHLVQALSEIWAR 396 (406)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998764
No 123
>PLN02721 threonine aldolase
Probab=99.95 E-value=5.2e-26 Score=222.31 Aligned_cols=333 Identities=14% Similarity=0.138 Sum_probs=216.4
Q ss_pred CeEEeccCCCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHh
Q 012991 39 GVARINNGSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQI 118 (452)
Q Consensus 39 ~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l 118 (452)
.++.|..+.+..+++.+.+++.+.. .....+.+ .+...++++.++++++.+ .++++++||+++.+++.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~a~~~~~-----~~~~~~~~--~~~~~~l~~~la~~~~~~---~~~~~~~Gs~a~~~~l~~~ 75 (353)
T PLN02721 6 RVVDLRSDTVTKPTDAMRAAMANAE-----VDDDVLGY--DPTALRLEEEMAKIFGKE---AALFVPSGTMGNLISVLVH 75 (353)
T ss_pred hhhhhhcccccCCCHHHHHHHHhcc-----CCCcccCC--CHHHHHHHHHHHHHhCCc---eeEEecCccHHHHHHHHHH
Confidence 3556666666666677888876531 01111112 233688999999999985 4677778888877777665
Q ss_pred hcccccCCCC-CCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccC-CCceEEEE
Q 012991 119 GRGFTEGRFH-RNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKD-GKMIRLAI 195 (452)
Q Consensus 119 ~~~~~~~~~~-~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~-~~~~~lv~ 195 (452)
.. +||+|++++++|.+.+.... ++...|.+++.++ .++++.+ ++++++.+++.... .+++++|+
T Consensus 76 --------~~~~gd~Vl~~~~~~~~~~~~~~-~~~~~g~~~~~v~----~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~ 142 (353)
T PLN02721 76 --------CDVRGSEVILGDNSHIHLYENGG-ISTLGGVHPRTVK----NNEDGTMDLDAIEAAIRPKGDDHFPTTRLIC 142 (353)
T ss_pred --------ccCCCCeEEEcCccceehhcccc-hhhhcCceeEecC----CCcCCCcCHHHHHHHHHhccCCCCCcceEEE
Confidence 34 89999999999976654211 2456799999884 3334444 89999988532110 15789999
Q ss_pred Eecc-CCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCc---ccccc--ccCccEEEEcCcccCcCCCCcEEEEE
Q 012991 196 IDHI-TSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSI---KIDVK--EIGADFYVSNLHKWFFCPPSVAFLYC 266 (452)
Q Consensus 196 ~~~~-~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~---~~~~~--~~~~d~~~~s~~K~l~g~~G~G~l~~ 266 (452)
++++ +||+|..+| +++|.++|+++|+ ++|+|+++..+.. ..+.. ..++|+++.|+|||++++.| ++++.
T Consensus 143 l~~~~~np~G~~~~~~~l~~l~~l~~~~g~-~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G-~~~~~ 220 (353)
T PLN02721 143 LENTHANCGGRCLSVEYTDKVGELAKRHGL-KLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAPVG-SVIVG 220 (353)
T ss_pred EeccccccCCccccHHHHHHHHHHHHHcCC-EEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCcee-eEEec
Confidence 9775 667899887 6799999999999 7999999865431 11211 22678999999999776654 45666
Q ss_pred ecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 012991 267 RKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSL 346 (452)
Q Consensus 267 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~ 346 (452)
+++++.. + ... ...++ +.+......+. .++..+.. -.+.+ ++..++++++.+.|.+++++.+
T Consensus 221 ~~~~~~~-~-~~~-~~~~~----------~~~~~~~~~~~-~~~~~l~~---~~~~~-~~~~~~~~~l~~~L~~~~~~~~ 282 (353)
T PLN02721 221 SKSFIRK-A-KRL-RKTLG----------GGMRQVGVLAA-AALVALQE---NVPKL-EDDHKKAKLLAEGLNQIKGLRV 282 (353)
T ss_pred CHHHHHh-H-HHH-HHhcC----------CCeehhHHHHH-HHHHHHHH---HHHHH-HHHHHHHHHHHHHHHhCCCcEE
Confidence 7766654 1 111 00011 11111111111 12222222 12223 3345678889999988877744
Q ss_pred -CCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCC
Q 012991 347 -GSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNT 425 (452)
Q Consensus 347 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t 425 (452)
..++. ++++++.++.. ...+...+++.|.+ .||.+.+. ..+++|++++.+++
T Consensus 283 ~~~~~~--~~~~~~~~~~~----~~~~~~~~~~~L~~-~gi~v~~~--------------------~~~~lR~~~~~~~~ 335 (353)
T PLN02721 283 NVAAVE--TNIVYFDITDG----SRITAEKLCKSLEE-HGVLLMPG--------------------NSSRIRVVTHHQIS 335 (353)
T ss_pred ecCCcc--ceEEEEEccCC----ccccHHHHHHHHHh-CCcEEecC--------------------CCceEEEEecCcCC
Confidence 33332 56888888621 11467789999975 59998632 23689999998899
Q ss_pred HHHHHHHHHHHHHHHh
Q 012991 426 LEDYEKFRDAVILLVE 441 (452)
Q Consensus 426 ~~di~~l~~~l~~~~~ 441 (452)
++|+++++++|++++.
T Consensus 336 ~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 336 DSDVQYTLSCFQQAAL 351 (353)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998764
No 124
>PRK07550 hypothetical protein; Provisional
Probab=99.95 E-value=9.7e-26 Score=222.78 Aligned_cols=337 Identities=12% Similarity=0.058 Sum_probs=225.5
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhC----CC-CCCcEEEecChhHH
Q 012991 37 QHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLIN----AD-DVGEISLVDNATTA 110 (452)
Q Consensus 37 ~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~----~~-~~~~i~~t~g~t~a 110 (452)
+.+.+.|..+.+. ..+..+.+++.+.... . ....|....+..++|++++++++ .. ++++|++|+|+++|
T Consensus 28 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 102 (386)
T PRK07550 28 DGPLIDLSQAVPGYPPPPELLRALAEAAAD----P-AAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQA 102 (386)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhC----c-CCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHH
Confidence 4568889888766 3466677777765531 1 11123333445666666666653 21 36899999999999
Q ss_pred HHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCC
Q 012991 111 AAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGK 189 (452)
Q Consensus 111 ~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~ 189 (452)
+.+++.++ .++||+|++++|.|......+ +..|.+++.+++.. ++...+ .+++++.+ ..
T Consensus 103 l~~~~~~l--------~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~~--~~~~~~~~~~l~~~~------~~ 162 (386)
T PRK07550 103 FWAAMVTL--------AGAGDEVILPLPWYFNHKMWL----DMLGIRPVYLPCDE--GPGLLPDPAAAEALI------TP 162 (386)
T ss_pred HHHHHHHh--------cCCCCEEEEcCCCCcchHHHH----HhcCCEEEEEecCC--CcCCCCCHHHHHHHh------cc
Confidence 99999876 489999999999998765544 45699999996531 112223 78899888 45
Q ss_pred ceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCc----ccccc---cc-CccEEEEcCcccCcCC
Q 012991 190 MIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSI----KIDVK---EI-GADFYVSNLHKWFFCP 258 (452)
Q Consensus 190 ~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~----~~~~~---~~-~~d~~~~s~~K~l~g~ 258 (452)
++++|++++|+||||..+| +++|.++|+++|+ ++|+|++++.... +.... .. .-.+++.|++|. +|.
T Consensus 163 ~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~-~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~g~ 240 (386)
T PRK07550 163 RTRAIALVTPNNPTGVVYPPELLHELYDLARRHGI-ALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKS-YAL 240 (386)
T ss_pred cCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCe-EEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhh-ccC
Confidence 7889999999999999987 6688999999999 7999998753211 11111 11 124678899996 554
Q ss_pred CC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 012991 259 PS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMAR 336 (452)
Q Consensus 259 ~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~ 336 (452)
+| +|+++++++++.. + ..... .....++...+.++..+++...+ -.+..+++++++++.+.+
T Consensus 241 ~G~RiG~i~~~~~~~~~-~-~~~~~-----------~~~~~~s~~~q~~~~~~l~~~~~---~~~~~~~~~~~~~~~l~~ 304 (386)
T PRK07550 241 TGHRVGAVVASPARIAE-I-EKFMD-----------TVAICAPRIGQIAVAWGLPNLAD---WRAGNRAEIARRRDAFRA 304 (386)
T ss_pred cccceEeeecCHHHHHH-H-HHHHh-----------hcccCCCcHHHHHHHHHhccHHH---HHHHHHHHHHHHHHHHHH
Confidence 44 8999888776654 1 11100 00122333344444444443333 245667777888888999
Q ss_pred HHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceE
Q 012991 337 MLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYA 416 (452)
Q Consensus 337 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i 416 (452)
.|....++.+. +.. +.++|+.++. .+.++.++++.|.+++||.+.++..+.. ...+++
T Consensus 305 ~L~~~~~~~~~-~~g--~~~~~~~~~~-----~~~~~~~l~~~l~~~~gv~v~pg~~f~~--------------~~~~~i 362 (386)
T PRK07550 305 VFARLPGWELL-ASG--AYFAYVRHPF-----PDRPSREVARRLAKEAGILCLPGTMFGP--------------GQEGYL 362 (386)
T ss_pred HHHhCCCceeC-CCc--eEEEEecCCC-----CCCCHHHHHHHHHHhcCEEEeCchhhCC--------------CCCCEE
Confidence 98876455433 222 6788888762 1456788999876667999987655421 224699
Q ss_pred EecccccCCHHHHHHHHHHHHHH
Q 012991 417 RISHQVYNTLEDYEKFRDAVILL 439 (452)
Q Consensus 417 Ris~~~~~t~~di~~l~~~l~~~ 439 (452)
|++++. .+++++++.++.|+++
T Consensus 363 Ris~~~-~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 363 RLAFAN-ADVAGIGELVERLRAF 384 (386)
T ss_pred EEEeec-CCHHHHHHHHHHHHhh
Confidence 999975 3688999999999875
No 125
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.95 E-value=8.2e-26 Score=227.92 Aligned_cols=351 Identities=15% Similarity=0.150 Sum_probs=222.2
Q ss_pred CeEEeccCCCCCCcHHHHHHHHHHHHH-------HhcCCchhhhhhhhHHHHHHHHHHHhHhC--------CCCCCcEEE
Q 012991 39 GVARINNGSFGSCPKSVLADQQKWQLK-------FLQQPDDFYFNSLRKGILESRAAVKDLIN--------ADDVGEISL 103 (452)
Q Consensus 39 ~~~~l~~~~~~~~p~~v~e~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~la~~~~--------~~~~~~i~~ 103 (452)
++|.|+.+.....-..+.+.+.+.... ....+.. ..+....+..++|+++|++++ + ++++|++
T Consensus 47 g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v-~pe~Ivi 124 (496)
T PLN02376 47 GIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDI-ANFQDYHGLKKFRQAIAHFMGKARGGKVTF-DPERVVM 124 (496)
T ss_pred ceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchh-hccCCCCCcHHHHHHHHHHHHHHhCCCCcC-ChhhEEE
Confidence 688888766544333344444443221 0011111 123334566778888888775 4 3789999
Q ss_pred ecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHh
Q 012991 104 VDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIE 182 (452)
Q Consensus 104 t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~ 182 (452)
|+|+++|+.+++.++ .++||.|++++|.|+.+...+. .+.|++++.+++.. ++...+ ++.++++++
T Consensus 125 t~Ga~~al~~l~~~l--------~~pGD~Vlv~~P~Y~~~~~~~~---~~~G~~vv~v~~~~--~~~~~~~~~~le~a~~ 191 (496)
T PLN02376 125 SGGATGANETIMFCL--------ADPGDVFLIPSPYYAAFDRDLR---WRTGVEIIPVPCSS--SDNFKLTVDAADWAYK 191 (496)
T ss_pred ccchHHHHHHHHHHh--------CCCCCEEEECCCCccchHHHHH---hhCCCEEEEEeCCC--CccCcCCHHHHHHHHH
Confidence 999999999999987 5899999999999998765543 24699999996531 222334 777776654
Q ss_pred ccccCCCceEEEEEeccCCCCcccccH---HHHHHHHHHcCCCEEEEecccccCCc----ccc---c----c--ccCcc-
Q 012991 183 KGKKDGKMIRLAIIDHITSMPCVVIPV---RKLVKICRDEGVDQVFVDAAHAMGSI----KID---V----K--EIGAD- 245 (452)
Q Consensus 183 ~~~~~~~~~~lv~~~~~~n~tG~~~~l---~~i~~l~~~~~~~~~ivD~a~~~g~~----~~~---~----~--~~~~d- 245 (452)
+....+.++++|++++|+||||.+++. ++|+++|+++++ ++|+|++++.... ... + . ..+.+
T Consensus 192 ~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i-~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~ 270 (496)
T PLN02376 192 KAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNI-HLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDL 270 (496)
T ss_pred HHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCC-EEEEEcCccccccCCCCcccHHHhhccccccccCCCe
Confidence 322224689999999999999999985 467888999999 7999999874221 111 1 0 00122
Q ss_pred -EEEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHH---HHHHhhcC
Q 012991 246 -FYVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVT---FVSRFEGG 319 (452)
Q Consensus 246 -~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~---~~~~~~~g 319 (452)
+++.|++|. +|.+| +|+++..++.+.. ..... .. .+..+...+.++...++ +..+ -
T Consensus 271 v~vv~S~SK~-~glpGlRvG~li~~~~~l~~-~~~~~-----------~~--~~~vs~~~Q~a~~~~L~d~~~~~~---~ 332 (496)
T PLN02376 271 IHIVYSLSKD-MGLPGFRVGIVYSFNDSVVS-CARKM-----------SS--FGLVSSQTQLMLASMLSDDQFVDN---F 332 (496)
T ss_pred EEEEEecccc-CCCCcceEEEEEECCHHHHH-HHHHH-----------hh--cCCCCHHHHHHHHHHhCChhHHHH---H
Confidence 356799996 66666 8998885444432 00000 00 01222223333333332 1111 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCcccc-CChhhHHHHHHHHhhhcceEeeecccCCCCC
Q 012991 320 IDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRV-MGEDDALRLRGHLRVRFGVEVPIHYQAPKDD 398 (452)
Q Consensus 320 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~ 398 (452)
+...++++.+..+.+.+.|.+. ++.+..+.+ +.++|+.++..... ....+..++.+.|.++.||.+.++..+..
T Consensus 333 l~~~r~~l~~r~~~l~~~L~~~-gi~~~~~~a--G~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~-- 407 (496)
T PLN02376 333 LMESSRRLGIRHKVFTTGIKKA-DIACLTSNA--GLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRC-- 407 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CCcccCCCc--eEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCC--
Confidence 3445666777788888888875 666655543 78999998632111 01113357888777667999987765521
Q ss_pred CCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 399 GQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 399 ~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
..++++|||++. .+.+.++..+++|++++.
T Consensus 408 ------------~~~g~~Ri~fa~-~~~~~l~~al~rl~~~l~ 437 (496)
T PLN02376 408 ------------TEPGWFRICFAN-MDDDTLHVALGRIQDFVS 437 (496)
T ss_pred ------------CCCCEEEEEeeC-CCHHHHHHHHHHHHHHHH
Confidence 236799999985 256889999999999885
No 126
>PRK09265 aminotransferase AlaT; Validated
Probab=99.95 E-value=4.6e-25 Score=219.14 Aligned_cols=343 Identities=17% Similarity=0.141 Sum_probs=221.9
Q ss_pred CCCCeEEeccCCCC----CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh------CCCCCCcEEEec
Q 012991 36 HQHGVARINNGSFG----SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI------NADDVGEISLVD 105 (452)
Q Consensus 36 ~~~~~~~l~~~~~~----~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~~i~~t~ 105 (452)
.+++++.|+.|.+. +.|+.+.+++.+..... ..|....+..++|+++++++ +++ +++|++|+
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~-------~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~-~~~i~~t~ 102 (404)
T PRK09265 31 EGHKILKLNIGNPAPFGFEAPDEILRDVIRNLPTA-------QGYSDSKGLFSARKAIMQYYQQKGIPDVD-VDDIYIGN 102 (404)
T ss_pred cCCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhcC-------CCCCCCCCcHHHHHHHHHHHhccCCCCCC-cccEEEeC
Confidence 56789999987663 36677877777654321 12333455678999999988 564 78999999
Q ss_pred ChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhcc
Q 012991 106 NATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKG 184 (452)
Q Consensus 106 g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~ 184 (452)
|+++++.+++.++ +++||+|++++|+|......+ ...|.+++.++.+ .+....+ .+++++.+
T Consensus 103 G~~~~l~~~~~~~--------~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~v~~~~~--~~~~~~~d~~~l~~~~--- 165 (404)
T PRK09265 103 GVSELIVMAMQAL--------LNNGDEVLVPAPDYPLWTAAV----SLSGGKPVHYLCD--EEAGWFPDLDDIRSKI--- 165 (404)
T ss_pred ChHHHHHHHHHHh--------CCCCCEEEEeCCCCcChHHHH----HHcCCEEEEEecc--cccCCCCCHHHHHHhc---
Confidence 9999999999876 589999999999998765544 4458888877542 1112234 78888888
Q ss_pred ccCCCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCC----cccccccc--C-ccEEEEcCccc
Q 012991 185 KKDGKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGS----IKIDVKEI--G-ADFYVSNLHKW 254 (452)
Q Consensus 185 ~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~----~~~~~~~~--~-~d~~~~s~~K~ 254 (452)
.+++++|++++|+||||.+++ +++|+++|+++|+ ++|+|++++.-. ....+... + .-+++.|++|.
T Consensus 166 ---~~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~-~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 241 (404)
T PRK09265 166 ---TPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNL-IIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKA 241 (404)
T ss_pred ---cccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCC-EEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhh
Confidence 567999999999999999999 7788999999999 799999875321 11111111 1 23566799996
Q ss_pred CcCCCC--cEEEEEe--cCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHH---HHHH
Q 012991 255 FFCPPS--VAFLYCR--KSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGI---MQRN 327 (452)
Q Consensus 255 l~g~~G--~G~l~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~---~~~~ 327 (452)
+|.+| +|++++. +.+... +...... ... .....+...+.++..++.... ..+.+ .+++
T Consensus 242 -~~~pGlRiG~~v~~~~~~~~~~-~~~~~~~--------~~~-~~~~~~~~~q~~~~~~l~~~~----~~~~~~~~~~~~ 306 (404)
T PRK09265 242 -YRVAGFRVGWMVLSGPKKHAKG-YIEGLDM--------LAS-MRLCANVPAQHAIQTALGGYQ----SINELILPGGRL 306 (404)
T ss_pred -ccCcccceEEEEEeCchHHHHH-HHHHHHH--------Hhc-cccCCCcHHHHHHHHHhcCch----hHHHHHHHHHHH
Confidence 66666 7888863 221111 0000000 000 001223333444443432111 11222 2355
Q ss_pred HHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCC
Q 012991 328 HEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARD 407 (452)
Q Consensus 328 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~ 407 (452)
.+.++.+.+.|.+.+++.+..|.. +.++|+.++.... ....+...+.+.|.+ +||.+.++..+..
T Consensus 307 ~~~r~~~~~~L~~~~~~~~~~p~~--g~~l~~~~~~~~~-~~~~~~~~~~~~l~~-~gv~v~pg~~F~~----------- 371 (404)
T PRK09265 307 YEQRDRAWELLNAIPGVSCVKPKG--ALYAFPKLDPKVY-PIHDDEQFVLDLLLQ-EKVLLVQGTGFNW----------- 371 (404)
T ss_pred HHHHHHHHHHHhcCCCCcccCCCc--ceEEEEEeccccc-CCCCHHHHHHHHHHh-CCEEEECchhhCC-----------
Confidence 667788888887766766655544 7788888863100 001133456666655 6999977655421
Q ss_pred CCCCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 408 KDGIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 408 ~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
..++++|+++. .+.++++..+++|+++++.
T Consensus 372 ---~~~~~~Ri~~~--~~~e~l~~~l~rl~~~l~~ 401 (404)
T PRK09265 372 ---PEPDHFRIVTL--PRVDDLEEAIGRIGRFLSG 401 (404)
T ss_pred ---CCCCeEEEEeC--CCHHHHHHHHHHHHHHHHH
Confidence 23579999996 4789999999999998864
No 127
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.95 E-value=2.4e-25 Score=205.09 Aligned_cols=343 Identities=13% Similarity=0.137 Sum_probs=251.9
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCC-CCCcEEEecChhHHHHHHH
Q 012991 38 HGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINAD-DVGEISLVDNATTAAAIVL 115 (452)
Q Consensus 38 ~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~~~i~~t~g~t~a~~~~~ 115 (452)
++++-+-.+.-. +.|++|.+++.+..+. +...|++...+.+..+..+.++.++-. +++.+++++|.-.++..++
T Consensus 25 ~DvlPmWVADMDf~~pp~i~~Al~~rvdh----GvfGY~~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I 100 (388)
T COG1168 25 EDVLPMWVADMDFPTPPEIIEALRERVDH----GVFGYPYGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAI 100 (388)
T ss_pred CCcceeeeecccCCCCHHHHHHHHHHHhc----CCCCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHH
Confidence 456655544444 5777799999988754 334455666678888999999887743 3688999999999999999
Q ss_pred HHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEE
Q 012991 116 QQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLA 194 (452)
Q Consensus 116 ~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv 194 (452)
+++ .++||.|++..|.|+.++..+.. .|.++...|+..+ +....+ .++||+.+. .++++++
T Consensus 101 ~~~--------T~~gd~Vvi~tPvY~PF~~~i~~----n~R~~i~~pL~~~-~~~y~iD~~~LE~~~~-----~~~vkl~ 162 (388)
T COG1168 101 RAL--------TKPGDGVVIQTPVYPPFYNAIKL----NGRKVIENPLVED-DGRYEIDFDALEKAFV-----DERVKLF 162 (388)
T ss_pred HHh--------CcCCCeeEecCCCchHHHHHHhh----cCcEEEecccccc-CCcEEecHHHHHHHHh-----cCCccEE
Confidence 987 59999999999999998877744 5889998876431 223334 999999997 4678999
Q ss_pred EEeccCCCCccccc---HHHHHHHHHHcCCCEEEEeccccc----CCcccccccc-----CccEEEEcCcccCcCCCC--
Q 012991 195 IIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAM----GSIKIDVKEI-----GADFYVSNLHKWFFCPPS-- 260 (452)
Q Consensus 195 ~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~----g~~~~~~~~~-----~~d~~~~s~~K~l~g~~G-- 260 (452)
++|+|+||+|.+.. +.+|++||++||+ +||.|+.|+- |.....+... +.-+.+.|.+|+ +...|
T Consensus 163 iLCnPHNP~Grvwt~eeL~~i~elc~kh~v-~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKt-FNlaGL~ 240 (388)
T COG1168 163 ILCNPHNPTGRVWTKEELRKIAELCLRHGV-RVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKT-FNLAGLK 240 (388)
T ss_pred EEeCCCCCCCccccHHHHHHHHHHHHHcCC-EEEeecccccccccCCCccchhhcChhhhcceEEEeecccc-ccchhhh
Confidence 99999999999986 6678999999999 8999999874 3222222211 233566788997 66666
Q ss_pred cEEEEEe-cCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHH
Q 012991 261 VAFLYCR-KSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLA 339 (452)
Q Consensus 261 ~G~l~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~ 339 (452)
++.++.. +++..+ +... ......+.++..++.+..+|.+.-..+ ++++.+.++.+++++.+.|.
T Consensus 241 ~a~~Ii~n~~lr~~-~~~~-----------l~~~~~~~~n~lg~~A~~aAY~~G~~W---Ld~L~~yl~~N~~~~~~~l~ 305 (388)
T COG1168 241 CAYIIISNRELRAK-FLKR-----------LKRNGLHGPSALGIIATEAAYNQGEPW---LDELLEYLKDNRDYVADFLN 305 (388)
T ss_pred heeEEecCHHHHHH-HHHH-----------HHHhcCCCCchHHHHHHHHHHHhchHH---HHHHHHHHHHHHHHHHHHHH
Confidence 4555554 444343 1111 111123567777777777777666655 77889999999999999997
Q ss_pred H-HcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEe
Q 012991 340 N-AWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARI 418 (452)
Q Consensus 340 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRi 418 (452)
+ +|++++..|++ ...+|+.... -+.+..++.+.|+++.+|.+..|+.++. ...|++|+
T Consensus 306 ~~~P~v~v~~p~g--TYL~WLD~r~-----l~l~d~~l~~~ll~~akVal~~G~~FG~--------------~g~gf~Rl 364 (388)
T COG1168 306 KHLPGVKVTEPQG--TYLAWLDCRE-----LGLDDSELAEFLLEEAKVALSPGSTFGE--------------EGSGFVRL 364 (388)
T ss_pred hhCCCcEEecCCC--ceeeeeeccc-----cCCChHHHHHHHHHhhcEeccCCCccCc--------------CCCceEEE
Confidence 6 46889988887 4555555431 2456678999999888999988888754 33689999
Q ss_pred cccccCCHHHHHHHHHHHHHHHhc
Q 012991 419 SHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 419 s~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
+++. +++-++..++.|++.++.
T Consensus 365 N~ac--pr~~L~eal~ri~~al~~ 386 (388)
T COG1168 365 NFAC--PRAILEEALERLKRALKK 386 (388)
T ss_pred ecCC--CHHHHHHHHHHHHHHHhc
Confidence 9985 777788888888877653
No 128
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.95 E-value=5.3e-25 Score=210.88 Aligned_cols=338 Identities=15% Similarity=0.183 Sum_probs=243.4
Q ss_pred CCCeEEeccCCCC--CCcHHHHHHHHHHHHHHhcC-CchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHH
Q 012991 37 QHGVARINNGSFG--SCPKSVLADQQKWQLKFLQQ-PDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAI 113 (452)
Q Consensus 37 ~~~~~~l~~~~~~--~~p~~v~e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~ 113 (452)
++.+++|..+.+- ...+.+.+++.+.+..+... +++..-.+..+...++++.+|+++|.+ +.++|++|- .|+..
T Consensus 38 ~~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e--~al~f~SGy-~AN~~ 114 (388)
T COG0156 38 GRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGAE--AALLFSSGF-VANLG 114 (388)
T ss_pred CceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCCC--cEEEEcccc-hhHHH
Confidence 4667777655543 33344888888888775322 222233667788899999999999995 556665555 57888
Q ss_pred HHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEE
Q 012991 114 VLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRL 193 (452)
Q Consensus 114 ~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~l 193 (452)
++.++ .+++|.|+.+...|.|+..+++. .+++++.+ ..++ ++.||+.+++.+....+.++
T Consensus 115 ~i~~l--------~~~~dli~~D~lnHASiidG~rl----s~a~~~~f----~HnD----~~~Le~~l~~~~~~~~~~~~ 174 (388)
T COG0156 115 LLSAL--------LKKGDLIFSDELNHASIIDGIRL----SRAEVRRF----KHND----LDHLEALLEEARENGARRKL 174 (388)
T ss_pred HHHHh--------cCCCcEEEEechhhhhHHHHHHh----CCCcEEEe----cCCC----HHHHHHHHHhhhccCCCceE
Confidence 88877 47799999999999998888753 58888888 5554 68888888763311225789
Q ss_pred EEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccc---------cccccCccEEEEcCcccCcCCCCcEEE
Q 012991 194 AIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKI---------DVKEIGADFYVSNLHKWFFCPPSVAFL 264 (452)
Q Consensus 194 v~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~---------~~~~~~~d~~~~s~~K~l~g~~G~G~l 264 (452)
|+++...++.|.+.|+++|.+++++|++ +++||++|+.|.+.- .+..-.+|+++.+++|. +|..| |++
T Consensus 175 IvtegVfSMdGdiApL~~l~~L~~ky~a-~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKA-lGs~G-g~v 251 (388)
T COG0156 175 IVTEGVFSMDGDIAPLPELVELAEKYGA-LLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKA-LGSSG-GYI 251 (388)
T ss_pred EEEeccccCCCCcCCHHHHHHHHHHhCc-EEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhh-hcccC-cee
Confidence 9999999999999999999999999999 799999999987642 22223458999999997 56665 788
Q ss_pred EEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCC
Q 012991 265 YCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGT 344 (452)
Q Consensus 265 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~ 344 (452)
.++..+++. ++..- ..+.+..+.+.....+..++++.+.+ ....+++++++..+++..+... ++
T Consensus 252 ~g~~~~~d~-L~~~a----------r~~ifStalpP~~aaa~~~al~~l~~----~~~~r~~L~~~~~~~~~~~~~~-~~ 315 (388)
T COG0156 252 AGSAALIDY-LRNRA----------RPFIFSTALPPAVAAAALAALRILEE----GPERRERLQELAAFFRSLLKAL-GL 315 (388)
T ss_pred eCcHHHHHH-HHHhC----------CceeccCCCCHHHHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 888777775 21110 01111233333344456667787774 3567888899999998666554 55
Q ss_pred CcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccC
Q 012991 345 SLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYN 424 (452)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~ 424 (452)
.+.... ++++.+.+. +...+.++.+.|.++ ||++....+|.. ......+|+++...+
T Consensus 316 ~~~~s~---s~I~pv~~g------d~~~a~~~s~~l~~~-Gi~v~~i~~PTV-------------p~gtarlRi~lta~h 372 (388)
T COG0156 316 VLLPSE---SPIIPVILG------DEERALEASRALLEE-GIYVSAIRPPTV-------------PKGTARLRITLTAAH 372 (388)
T ss_pred ccCCCC---CCeeeeEeC------CHHHHHHHHHHHHHC-CeeEeeecCCCC-------------CCCcceEEEEecCCC
Confidence 542222 456666654 345678899999887 999976665533 234578999999999
Q ss_pred CHHHHHHHHHHHHHH
Q 012991 425 TLEDYEKFRDAVILL 439 (452)
Q Consensus 425 t~~di~~l~~~l~~~ 439 (452)
|++||+++++++.++
T Consensus 373 t~~~I~~l~~~l~~~ 387 (388)
T COG0156 373 TEEDIDRLAEALSEV 387 (388)
T ss_pred CHHHHHHHHHHHHhh
Confidence 999999999999875
No 129
>PRK12414 putative aminotransferase; Provisional
Probab=99.95 E-value=3.9e-25 Score=218.06 Aligned_cols=337 Identities=13% Similarity=0.144 Sum_probs=220.3
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhh--hhhhHHHHHHHHHHHhHhCCC-CC-CcEEEecChhHHH
Q 012991 37 QHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYF--NSLRKGILESRAAVKDLINAD-DV-GEISLVDNATTAA 111 (452)
Q Consensus 37 ~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~la~~~~~~-~~-~~i~~t~g~t~a~ 111 (452)
+.+++.|+.+.+. +.++.+.+++.+.... +...|. .+..++.+.+.+.+++++|++ ++ +++++|+|+++++
T Consensus 28 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~----~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al 103 (384)
T PRK12414 28 QHDALNLSQGAPNFAPDPALVEGVARAMRD----GHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGL 103 (384)
T ss_pred hCCeEEcCCCCCCCCCCHHHHHHHHHHHHh----CCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHH
Confidence 4678999988766 3467788888776542 111121 223445566666666677874 22 5899999999999
Q ss_pred HHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCc
Q 012991 112 AIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKM 190 (452)
Q Consensus 112 ~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~ 190 (452)
.+++.++ +.+||+|++++|+|.+....+ +..|.+++.++++. +...+ ++.|++.+ .++
T Consensus 104 ~~~~~~l--------~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~~---~~~~~d~~~l~~~l------~~~ 162 (384)
T PRK12414 104 YAAISAL--------VHPGDEVIYFEPSFDSYAPIV----RLQGATPVAIKLSP---EDFRVNWDEVAAAI------TPR 162 (384)
T ss_pred HHHHHHh--------cCCCCEEEEeCCCccchHHHH----HHcCCEEEEEecCc---cccccCHHHHHhhc------Ccc
Confidence 9999876 589999999999998754443 44689999886521 12334 78899888 467
Q ss_pred eEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCc---cc-ccccc----CccEEEEcCcccCcCCC
Q 012991 191 IRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSI---KI-DVKEI----GADFYVSNLHKWFFCPP 259 (452)
Q Consensus 191 ~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~---~~-~~~~~----~~d~~~~s~~K~l~g~~ 259 (452)
+++|++++++||||.+++ +++|.++|++|++ ++|+|+++..... +. .+... +-.+++.|++|. +|.+
T Consensus 163 ~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~-~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~-~~~p 240 (384)
T PRK12414 163 TRMIIVNTPHNPSATVFSAADLARLAQLTRNTDI-VILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKS-YHVT 240 (384)
T ss_pred cEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCe-EEEEhhhhhhccCCCCCccCcccCcCccCcEEEEeccccc-ccCc
Confidence 999999999999999976 6678888999999 7999999864221 11 11111 234788899995 6766
Q ss_pred C--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Q 012991 260 S--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARM 337 (452)
Q Consensus 260 G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~ 337 (452)
| +|+++++++++.. + ..... ......+...+.+ +..++.. ......+++.++++++.+.+.
T Consensus 241 GlRiG~~v~~~~l~~~-l-~~~~~-----------~~~~~~s~~~q~a---~~~~l~~-~~~~~~~~~~~~~~r~~l~~~ 303 (384)
T PRK12414 241 GWRVGYCLAPAELMDE-I-RKVHQ-----------FMVFSADTPMQHA---FAEALAE-PASYLGLGAFYQRKRDLLARE 303 (384)
T ss_pred cceEEEEecCHHHHHH-H-HHHHh-----------heecCCCcHHHHH---HHHHhcC-ChHHHHHHHHHHHHHHHHHHH
Confidence 6 7999988877654 1 11100 0001222223322 2333332 012345677788888999999
Q ss_pred HHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEE
Q 012991 338 LANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYAR 417 (452)
Q Consensus 338 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iR 417 (452)
|.+. ++.+..+.+ +.++|+.++.. ...+..+++..+.+++||.+.++..+... ....+++|
T Consensus 304 L~~~-g~~~~~~~g--g~~~~~~~~~~----~~~~~~~~~~~~l~~~gV~v~pg~~f~~~------------~~~~~~iR 364 (384)
T PRK12414 304 LAGS-RFELLPSEG--SFFMLARFRHF----SDESDSDFVLRLIRDARVATIPLSAFYTD------------GTDTGLIR 364 (384)
T ss_pred HHhC-CCeecCCCc--ceEEEEccccc----CCCCHHHHHHHHHHhCCEEEecchhhcCC------------CCCCCEEE
Confidence 9886 666554443 56677666421 01233455544434569999876654221 12357999
Q ss_pred ecccccCCHHHHHHHHHHHHH
Q 012991 418 ISHQVYNTLEDYEKFRDAVIL 438 (452)
Q Consensus 418 is~~~~~t~~di~~l~~~l~~ 438 (452)
|+++. ++++++..+++|.+
T Consensus 365 is~~~--~~~~~~~~~~rl~~ 383 (384)
T PRK12414 365 LSFSK--DDATLVEGARRLCS 383 (384)
T ss_pred EEecC--CHHHHHHHHHHHhh
Confidence 99995 67888888888764
No 130
>PLN02263 serine decarboxylase
Probab=99.95 E-value=5.1e-25 Score=215.38 Aligned_cols=298 Identities=14% Similarity=0.076 Sum_probs=222.8
Q ss_pred hhhHHHHHHHHHHHhHhCCCCC-CcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcC
Q 012991 77 SLRKGILESRAAVKDLINADDV-GEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAG 155 (452)
Q Consensus 77 ~~~~~~~~~~~~la~~~~~~~~-~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g 155 (452)
...++..++-+++++++|.++. ...++|+|||+++..++.+. |.+ .+...|++++..|.|+.++... .|
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aA-Re~-----~~~~vvy~S~~aH~Sv~KAa~l----lg 199 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVG-REV-----FPDGILYASRESHYSVFKAARM----YR 199 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHH-Hhh-----cCCcEEEEcCCccHHHHHHHHh----cC
Confidence 5678889999999999999631 24689999999999998865 322 2345788899999999888655 49
Q ss_pred cEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCC-----CEEEEecc
Q 012991 156 GSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGV-----DQVFVDAA 229 (452)
Q Consensus 156 ~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~-----~~~ivD~a 229 (452)
++++.+ |.++.+.+ +++|+++|++. ..+|.+|+.+.+++++|.+.|+++|+++|+++|+ | +|||+|
T Consensus 200 i~~~~V----p~d~~g~mD~~aL~~aI~~d---~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iw-lHVDAA 271 (470)
T PLN02263 200 MECVKV----DTLVSGEIDCADFKAKLLAN---KDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFY-IHCDGA 271 (470)
T ss_pred CcceEe----ccCCCCcCcHHHHHHHHHhC---CCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCee-EEEecc
Confidence 999998 55566677 99999999753 3468899999999999999999999999999985 6 999999
Q ss_pred cccCCcc-------ccccccCccEEEEcCcccCcCCCCcEEEEEecCccccCC--CCCceeccCCCCcccccccccccCc
Q 012991 230 HAMGSIK-------IDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDM--HHPVVSHEFGNGLPIESAWIGTRDY 300 (452)
Q Consensus 230 ~~~g~~~-------~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (452)
++...++ +++.. .+|.++.++|||++.|.++|++++|++.+.. + ...|+.. .+....++.+.
T Consensus 272 ~GG~~lPf~~~~~~~df~~-~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~-~~~~~~Yl~~-------~d~ti~gSR~g 342 (470)
T PLN02263 272 LFGLMMPFVKRAPKVTFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINV-LSSNVEYLAS-------RDATIMGSRNG 342 (470)
T ss_pred chhhHhhhcccccccCCCc-CccEEEECCccccCCCcCEEEEEEehhhHhh-hccChHhhCC-------CCCCcCCCCCc
Confidence 8765443 33332 4899999999999999999999999765532 1 1122211 01123466666
Q ss_pred cccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHH
Q 012991 301 SAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHL 380 (452)
Q Consensus 301 ~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 380 (452)
...+.++..++.+..- |+.+..++..++++++.+.|.+. ++.+...+. +.+++|.-| +... .
T Consensus 343 ~~al~lW~~L~~~G~~--G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~--s~~V~f~~p---------~~~~----~ 404 (470)
T PLN02263 343 HAPIFLWYTLNRKGYR--GFQKEVQKCLRNAHYLKDRLREA-GISAMLNEL--SSTVVFERP---------KDEE----F 404 (470)
T ss_pred HHHHHHHHHHHHhCHH--HHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCC--ceEEEEecC---------chHH----h
Confidence 5556677777766653 88888999999999999999987 665443333 567777654 1111 1
Q ss_pred hhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 381 RVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 381 ~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
.+ |+.+.. .++.+++++....+.+.++.+++.|++....
T Consensus 405 -~~-gW~L~~---------------------~~~~~Hivvmphv~~~~id~fi~DL~~~~~~ 443 (470)
T PLN02263 405 -VR-RWQLAC---------------------QGNIAHVVVMPSVTIEKLDYFLKELVEKRST 443 (470)
T ss_pred -hc-ceEEcc---------------------CCCcEEEEEcCCCCHHHHHHHHHHHHHHHhh
Confidence 33 776631 2357999999888999999999999988764
No 131
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=6.5e-25 Score=214.62 Aligned_cols=330 Identities=13% Similarity=0.108 Sum_probs=217.2
Q ss_pred CHHHHHhhhccCCCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEE
Q 012991 25 SEAEIRDEFSHHQHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISL 103 (452)
Q Consensus 25 ~~~~ir~~~~~~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~ 103 (452)
++.++.+.....+..++.|+.+... ..|+.+.+++.+.......++ .....++|+.++++++++ +++|++
T Consensus 17 ~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~--------~~~~~~lr~~ia~~~~~~-~~~I~i 87 (357)
T PRK14809 17 GIEEVARELGLDPDDLVKLSSNENPHGPSPAAVEAIREAAERVHSYP--------KASHADLTAALADRWDVS-PEQVWL 87 (357)
T ss_pred CHHHHHHHhCCCccceeEecCCCCCCCCCHHHHHHHHHHHhhhhcCC--------CCCHHHHHHHHHHHhCCC-cceEEE
Confidence 3545555543334578999887554 455668888877654322222 123678999999999996 899999
Q ss_pred ecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHh
Q 012991 104 VDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIE 182 (452)
Q Consensus 104 t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~ 182 (452)
|+|+++++.+++.++ +++||+|++++|.|...... +...|.+++.++++. ++...+ .+.+++..
T Consensus 88 t~G~~~al~~~~~~~--------~~~gd~V~v~~P~y~~~~~~----~~~~g~~~~~~~l~~--~~~~~~~~~~~~~~~- 152 (357)
T PRK14809 88 ANGGDGALDYLARAM--------LDPGDTVLVPDPGFAYYGMS----ARYHHGEVREYPVSK--ADDFEQTADTVLDAY- 152 (357)
T ss_pred CCCHHHHHHHHHHHh--------cCCCCEEEEeCCChHHHHHH----HHHcCCeEEEEeccc--CcCCCcCHHHHHHhh-
Confidence 999999999999876 58999999999998754333 345688898886631 222222 55555544
Q ss_pred ccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHc--CCCEEEEecccccCCcc---cc-ccccCccEEEEcCcccCc
Q 012991 183 KGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDE--GVDQVFVDAAHAMGSIK---ID-VKEIGADFYVSNLHKWFF 256 (452)
Q Consensus 183 ~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~--~~~~~ivD~a~~~g~~~---~~-~~~~~~d~~~~s~~K~l~ 256 (452)
.++++|++++++||||.++|.+++.++++.. ++ ++|+|+++..-... .. ....+-.+++.|++|. +
T Consensus 153 ------~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~-~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~-~ 224 (357)
T PRK14809 153 ------DGERIVYLTSPHNPTGSEIPLDEVEALAERTDEET-LVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKA-Y 224 (357)
T ss_pred ------cCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCc-EEEEechhhhccCCchhHHHHhhCCCEEEEecchhH-h
Confidence 3578999999999999999988887777654 78 79999998642211 11 1111234677899996 6
Q ss_pred CCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 012991 257 CPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKM 334 (452)
Q Consensus 257 g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l 334 (452)
|.+| +|++++++++++. + ..... ....+ ..+..+++..+.. .+-++..++.+++.++.+
T Consensus 225 ~~~GlRiG~~~~~~~~~~~-~-~~~~~-------------~~~~~---~~~~~~a~~~l~~-~~~~~~~~~~~~~~r~~l 285 (357)
T PRK14809 225 GLAGLRLGYAVVPEEWADA-Y-ARVNT-------------PFAAS---ELACRAGLAALDD-DEHVERTVETARWAREYI 285 (357)
T ss_pred cCcchhheeeecCHHHHHH-H-HHhCC-------------CCCCC---HHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHH
Confidence 6666 8999988877765 2 11100 01111 1222333333321 012444555566666666
Q ss_pred HHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccc
Q 012991 335 ARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITG 414 (452)
Q Consensus 335 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (452)
.+.|... . .+++ +.++|+.++ +..++.+.|.+ .||.+..+..+ ..++
T Consensus 286 ~~~L~~~----~-~~~~--g~f~~~~~~---------~~~~~~~~l~~-~gv~v~~g~~f----------------~~~~ 332 (357)
T PRK14809 286 REELDAP----T-WESA--GNFVLAEVG---------DASAVAEAAQE-RGVIVRDCTSF----------------GLPE 332 (357)
T ss_pred HHHhcCc----c-CCCC--CCEEEEECC---------CHHHHHHHHHH-CCEEEEECccC----------------CCCC
Confidence 6666431 1 1333 678888764 35678888865 59999876554 1247
Q ss_pred eEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 415 YARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 415 ~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
++|+++. +.++++.++++|+++++
T Consensus 333 ~iRls~~---~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 333 CIRITCG---TREETERAVEVLNEVLA 356 (357)
T ss_pred eEEEecC---CHHHHHHHHHHHHHHhc
Confidence 9999986 57899999999998764
No 132
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.95 E-value=6.6e-25 Score=213.98 Aligned_cols=333 Identities=15% Similarity=0.167 Sum_probs=221.9
Q ss_pred HHHHHhhhccCCCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEe
Q 012991 26 EAEIRDEFSHHQHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLV 104 (452)
Q Consensus 26 ~~~ir~~~~~~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t 104 (452)
+..+.+++....+.++.|+.+... ..|+.+.+++.+.+..... |. .....++|++++++++++ +++|++|
T Consensus 7 ~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~-------Y~-~~~~~~lr~~ia~~~~~~-~~~i~it 77 (354)
T PRK06358 7 INEIAREKGLTKNMILDFSANINPLGVPESLKQAITENLDKLVE-------YP-DPDYLELRKRIASFEQLD-LENVILG 77 (354)
T ss_pred HHHHHHHhCCCccceEEecCCCCCCCCCHHHHHHHHHHHHhhhc-------CC-CccHHHHHHHHHHHhCCC-hhhEEEC
Confidence 444555555444557888776543 4577788888876543321 21 223678999999999996 8999999
Q ss_pred cChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhcc
Q 012991 105 DNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKG 184 (452)
Q Consensus 105 ~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~ 184 (452)
+|+++++..++.++ .+ +.|++++|.|+.....+ ...|.+++.++++. ++...+-+++.+.+
T Consensus 78 ~Ga~~~l~~~~~~~---------~~-~~v~i~~P~y~~~~~~~----~~~g~~~~~~~~~~--~~~~~~d~~~~~~~--- 138 (354)
T PRK06358 78 NGATELIFNIVKVT---------KP-KKVLILAPTFAEYERAL----KAFDAEIEYAELTE--ETNFAANEIVLEEI--- 138 (354)
T ss_pred CCHHHHHHHHHHHh---------CC-CcEEEecCChHHHHHHH----HHcCCeeEEEeCcc--ccCCCccHHHHHhh---
Confidence 99999999998864 33 58999999998765444 55699999986521 11111113334444
Q ss_pred ccCCCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCcc------cc-ccccCccEEEEcCccc
Q 012991 185 KKDGKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSIK------ID-VKEIGADFYVSNLHKW 254 (452)
Q Consensus 185 ~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~~------~~-~~~~~~d~~~~s~~K~ 254 (452)
..++++|++++|+||||..++ +++|.++|+++++ ++|+|+++..-... +. ....+--+++.|++|.
T Consensus 139 ---~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~-~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 214 (354)
T PRK06358 139 ---KEEIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNI-YLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKF 214 (354)
T ss_pred ---ccCCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCC-EEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhh
Confidence 346899999999999999997 5677888999999 79999997532211 11 1111234778899996
Q ss_pred CcCCCC--cEEEEEe-cCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHH
Q 012991 255 FFCPPS--VAFLYCR-KSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQA 331 (452)
Q Consensus 255 l~g~~G--~G~l~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~ 331 (452)
+|.+| +|++++. +.+++. + ..... ..+.+...+.+...+++.. . -+++.++.+++.+
T Consensus 215 -~gl~G~RiG~lv~~~~~~~~~-~-~~~~~-------------~~~~~~~~q~~~~~~l~~~-~---~~~~~~~~~~~~r 274 (354)
T PRK06358 215 -FAIPGLRLGYGLTSNKNLAEK-L-LQMRE-------------PWSINTFADLAGQTLLDDK-E---YIKKTIQWIKEEK 274 (354)
T ss_pred -ccCcchhheeeecCCHHHHHH-H-HHhCC-------------CCcchHHHHHHHHHHhccH-H---HHHHHHHHHHHHH
Confidence 67666 8888775 455443 1 11100 0122222333333333211 1 2356677778888
Q ss_pred HHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCC
Q 012991 332 LKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGI 411 (452)
Q Consensus 332 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~ 411 (452)
+.+.+.|.+.+++.+..+. ++++|++++ +..++.+.|.+ +||.+..+..+.. .
T Consensus 275 ~~l~~~L~~~~~~~~~~~~---g~f~~~~~~---------~~~~~~~~l~~-~gI~v~~~~~f~~--------------~ 327 (354)
T PRK06358 275 DFLYNGLSEFKGIKVYKPS---VNFIFFKLE---------KPIDLRKELLK-KGILIRSCSNYRG--------------L 327 (354)
T ss_pred HHHHHHHhcCCCcEEcCCc---ceEEEEEcC---------chHHHHHHHHH-CCeEEEECCCCCC--------------C
Confidence 8899999877666655443 568888886 23678888876 5999987665421 2
Q ss_pred ccceEEecccccCCHHHHHHHHHHHHHHH
Q 012991 412 ITGYARISHQVYNTLEDYEKFRDAVILLV 440 (452)
Q Consensus 412 ~~~~iRis~~~~~t~~di~~l~~~l~~~~ 440 (452)
..+++|+++. +.++.++++++|++++
T Consensus 328 ~~~~iRls~~---~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 328 DENYYRVAVK---SREDNKKLLKALEVIL 353 (354)
T ss_pred CCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 3579999998 8999999999998875
No 133
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.95 E-value=2e-25 Score=221.62 Aligned_cols=348 Identities=17% Similarity=0.202 Sum_probs=225.9
Q ss_pred hccCCCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh----CCC-CCC-cEEEec
Q 012991 33 FSHHQHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI----NAD-DVG-EISLVD 105 (452)
Q Consensus 33 ~~~~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~-~~~-~i~~t~ 105 (452)
....+.+++.|+.+.+. ..|..+.+++.+.... . ....|....+...+|+.+++++ +.+ +++ +|++|+
T Consensus 28 ~~~~~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~----~-~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~ 102 (403)
T PRK08636 28 ARRAGEDIIDFSMGNPDGPTPQHIIDKLCESAQK----P-KTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATM 102 (403)
T ss_pred HHhcCCCEEEcCCcCCCCCCCHHHHHHHHHHhcC----C-ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECC
Confidence 33345678889887765 3455566666554321 1 1123444455667777777765 532 355 799999
Q ss_pred ChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-H----HHHHHH
Q 012991 106 NATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-I----NEFKKG 180 (452)
Q Consensus 106 g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~----~~l~~~ 180 (452)
|+++++.+++.++ +++||.|++++|+|+.....+ ...|.+++.++++. ++...+ . +.++++
T Consensus 103 G~~~al~~~~~~l--------~~~gd~Vlv~~P~y~~~~~~~----~~~g~~~~~v~~~~--~~~~~~d~~~l~~~l~~~ 168 (403)
T PRK08636 103 GSKEGYVHLVQAI--------TNPGDVAIVPDPAYPIHSQAF----ILAGGNVHKMPLEY--NEDFELDEDQFFENLEKA 168 (403)
T ss_pred ChHHHHHHHHHHh--------CCCCCEEEEcCCCCcchHHHH----HhcCCEEEEEeccc--cccCccChhhhhhHHHHH
Confidence 9999999999987 589999999999998875554 44699999986631 111122 3 356666
Q ss_pred HhccccCCCceEEEEEeccCCCCcccccH---HHHHHHHHHcCCCEEEEecccccCCc----ccc---cccc-CccEEEE
Q 012991 181 IEKGKKDGKMIRLAIIDHITSMPCVVIPV---RKLVKICRDEGVDQVFVDAAHAMGSI----KID---VKEI-GADFYVS 249 (452)
Q Consensus 181 i~~~~~~~~~~~lv~~~~~~n~tG~~~~l---~~i~~l~~~~~~~~~ivD~a~~~g~~----~~~---~~~~-~~d~~~~ 249 (452)
+++. ..+++++++++|+||||.+++. ++|+++|++|++ ++|+|++++.... ... +... +..+++.
T Consensus 169 ~~~~---~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~-~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~ 244 (403)
T PRK08636 169 LRES---SPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERF-YIISDIAYADITFDGYKTPSILEVEGAKDVAVESY 244 (403)
T ss_pred Hhhc---cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCc-EEEEeccchhhccCCCCCCChhcCCCccccEEEEE
Confidence 6432 3578999999999999999985 567888999999 7999999763221 111 1111 2234578
Q ss_pred cCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHH
Q 012991 250 NLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRN 327 (452)
Q Consensus 250 s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~ 327 (452)
|++|. +|.+| +|+++.+++++.. + ...... ...+++. ..+.++..+++.... -++.+++.+
T Consensus 245 S~SK~-~~~~GlRiG~iv~~~~li~~-~-~~~~~~----------~~~~~~~-~~q~~~~~~~~~~~~---~~~~~~~~~ 307 (403)
T PRK08636 245 TLSKS-YNMAGWRVGFVVGNKKLVGA-L-KKIKSW----------LDYGMFT-PIQVAATIALDGDQS---CVEEIRETY 307 (403)
T ss_pred ecccc-cCCccceeeeeeCCHHHHHH-H-HHHHHH----------hcccCCh-HHHHHHHHHHhCcHH---HHHHHHHHH
Confidence 99996 66556 8998888877764 1 111000 0001111 122222222221111 255667777
Q ss_pred HHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCC
Q 012991 328 HEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARD 407 (452)
Q Consensus 328 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~ 407 (452)
+++++.+.+.|.+. ++.+..+.+ +.++|+.+|+... ..+..++.+.+.+++||.+.++..+..
T Consensus 308 ~~~~~~l~~~L~~~-~~~~~~p~~--g~~~~~~l~~~~~---~~~~~~l~~~ll~~~gV~v~pg~~f~~----------- 370 (403)
T PRK08636 308 RKRRDVLIESFANA-GWELQKPRA--SMFVWAKIPEPAR---HLGSLEFSKQLLTEAKVAVSPGIGFGE----------- 370 (403)
T ss_pred HHHHHHHHHHHHHC-CCcccCCCc--ceEEEEECCCccC---CCCHHHHHHHHHHhCCEEEecchhhCc-----------
Confidence 88888888988876 666555544 7899999873211 224567887765556999987665522
Q ss_pred CCCCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 408 KDGIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 408 ~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
...+++||+++ .+.++++..++.|+++++.
T Consensus 371 ---~~~~~iRi~~~--~~~~~l~~~~~rl~~~l~~ 400 (403)
T PRK08636 371 ---YGDEYVRIALI--ENENRIRQAARNIKKFLKE 400 (403)
T ss_pred ---CCCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 23579999997 4788899999999888754
No 134
>PRK09082 methionine aminotransferase; Validated
Probab=99.95 E-value=2.9e-25 Score=219.19 Aligned_cols=338 Identities=16% Similarity=0.143 Sum_probs=226.8
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhh--hhhhHHHHHHHHHHHhHhCCC-CC-CcEEEecChhHHH
Q 012991 37 QHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYF--NSLRKGILESRAAVKDLINAD-DV-GEISLVDNATTAA 111 (452)
Q Consensus 37 ~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~la~~~~~~-~~-~~i~~t~g~t~a~ 111 (452)
+.++++|+.|.+. +.++.+.+++.+.+... ...|. .+..++.+.+.+.+.++++.+ ++ +++++|+|+++|+
T Consensus 29 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~----~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al 104 (386)
T PRK09082 29 EHGAINLSQGFPDFDGPPYLVEALAYAMAAG----HNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEAL 104 (386)
T ss_pred hCCEEEecCCCCCCCCCHHHHHHHHHHHHcC----CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHH
Confidence 4678999987665 34667888887765421 11111 223444555666666667764 23 3799999999999
Q ss_pred HHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCc
Q 012991 112 AIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKM 190 (452)
Q Consensus 112 ~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~ 190 (452)
.+++.++ +.+||+|++++|.|.+....+. ..|.++..++++. +...+ ++++++.+ .++
T Consensus 105 ~~~~~~~--------~~~gd~Vli~~p~y~~~~~~~~----~~g~~~~~~~~~~---~~~~~d~~~l~~~~------~~~ 163 (386)
T PRK09082 105 FAAILAL--------VRPGDEVIVFDPSYDSYAPAIE----LAGGRAVRVALQP---PDFRVDWQRFAAAI------SPR 163 (386)
T ss_pred HHHHHHH--------cCCCCEEEEeCCCchhhHHHHH----HcCCEEEEEecCc---ccccCCHHHHHHhc------Ccc
Confidence 9999876 5899999999999998766554 3599999996521 12334 78899888 467
Q ss_pred eEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCc----cc---cccc-cCccEEEEcCcccCcCCC
Q 012991 191 IRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSI----KI---DVKE-IGADFYVSNLHKWFFCPP 259 (452)
Q Consensus 191 ~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~----~~---~~~~-~~~d~~~~s~~K~l~g~~ 259 (452)
+++|++++++||||..++ +++|.++|++|++ ++|+|++++.... .. .... .+..+++.|++|. +|.+
T Consensus 164 ~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i-~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~-~~~~ 241 (386)
T PRK09082 164 TRLIILNTPHNPSGTVWSAADMRALWQLIAGTDI-YVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKT-YHVT 241 (386)
T ss_pred ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCE-EEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhh-ccch
Confidence 899999999999999865 6678999999999 7999999754221 11 1111 1345788899996 6666
Q ss_pred C--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Q 012991 260 S--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARM 337 (452)
Q Consensus 260 G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~ 337 (452)
| +|+++++++++.. + .... .....+.+...+.++. .++.......+++++.++++++.+.+.
T Consensus 242 G~RiG~iv~~~~l~~~-~-~~~~-----------~~~~~~~~~~~q~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~ 305 (386)
T PRK09082 242 GWKVGYCVAPAALSAE-F-RKVH-----------QYNTFTVNTPAQLALA---DYLRAEPEHYLELPAFYQAKRDRFRAA 305 (386)
T ss_pred hhhhhhhhCCHHHHHH-H-HHHH-----------hhhcCCCChHHHHHHH---HHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 6 7999988777664 1 1110 0000122333333333 333211113566677788889999999
Q ss_pred HHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEE
Q 012991 338 LANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYAR 417 (452)
Q Consensus 338 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iR 417 (452)
|.+. ++++..+.+ +.++|+.+++. .+.+..++++.|.+++||.+.++..+... ....+++|
T Consensus 306 L~~~-~~~~~~~~g--~~~~~~~~~~~----~~~~~~~~~~~l~~~~~v~v~pg~~f~~~------------~~~~~~~R 366 (386)
T PRK09082 306 LANS-RFKLLPCEG--TYFQLVDYSAI----SDLDDVEFCQWLTREHGVAAIPLSVFYAD------------PFPHRLVR 366 (386)
T ss_pred HHhC-CCcccCCCe--eEEEEEecccc----CCCCHHHHHHHHHHhCCEEEeCcHHhCCC------------CCCCCEEE
Confidence 9874 666654443 66788887621 13467789888766679999776544211 12357999
Q ss_pred ecccccCCHHHHHHHHHHHHH
Q 012991 418 ISHQVYNTLEDYEKFRDAVIL 438 (452)
Q Consensus 418 is~~~~~t~~di~~l~~~l~~ 438 (452)
++++. ++++++..+++|++
T Consensus 367 i~~~~--~~~~l~~~~~rl~~ 385 (386)
T PRK09082 367 LCFAK--QEETLDAAAERLCQ 385 (386)
T ss_pred EEecC--CHHHHHHHHHHHhh
Confidence 99985 68889888888865
No 135
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.95 E-value=2.5e-25 Score=220.77 Aligned_cols=340 Identities=16% Similarity=0.122 Sum_probs=218.5
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh---CCCCCCcEEEecChhHHHH
Q 012991 37 QHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI---NADDVGEISLVDNATTAAA 112 (452)
Q Consensus 37 ~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~---~~~~~~~i~~t~g~t~a~~ 112 (452)
+.+++.|+.+.+. ..|+.+.+++.+.+..... +.....|....+..++|+++++++ +++ +++|++|+|+++++.
T Consensus 32 ~~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~Y~p~~g~~~lr~aia~~~~~~~~~-~d~I~it~Ga~~al~ 109 (402)
T TIGR03542 32 SADIIRLGIGDTTQPLPASVIEAFHNAVDELAS-EETFRGYGPEQGYPFLREAIAENDYRGRID-PEEIFISDGAKCDVF 109 (402)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhcccc-cccccCCCCCCCCHHHHHHHHHHHHhcCCC-HHHEEECCCcHHHHH
Confidence 4678999988766 4567788888887654211 111123444567888999999976 564 799999999999998
Q ss_pred HHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCc-----------EEEEEeCCCCCCChHHH-HHHHHHH
Q 012991 113 IVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGG-----------SVVEVQLPFPLASEEEI-INEFKKG 180 (452)
Q Consensus 113 ~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~-----------~v~~~~~~~~~~~~~~~-~~~l~~~ 180 (452)
.++. + +.+|++|++++|+|......+ +..|. +++.++. +.++.+ .+ ++
T Consensus 110 ~l~~-l--------~~~gd~Vlv~~P~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~v~~----~~~~~~~~~-~~-- 169 (402)
T TIGR03542 110 RLQS-L--------FGSDNTVAVQDPVYPAYVDSN----VMAGRAGVLDDDGRYSKITYLPC----TKENNFIPD-LP-- 169 (402)
T ss_pred HHHH-h--------cCCCCEEEEeCCCCcchHHHH----HHcCCccccccccccceEEEeec----chhhCCCCC-cc--
Confidence 8643 3 478999999999998875554 44577 8887743 221112 22 11
Q ss_pred HhccccCCCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCC----cccccccc----CccEEEE
Q 012991 181 IEKGKKDGKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGS----IKIDVKEI----GADFYVS 249 (452)
Q Consensus 181 i~~~~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~----~~~~~~~~----~~d~~~~ 249 (452)
. ..++++|++++|+||||.+++ +++|+++|+++++ ++|+|++++... .+..+... +..+++.
T Consensus 170 --~----~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~-~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~ 242 (402)
T TIGR03542 170 --E----EPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGS-LILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFR 242 (402)
T ss_pred --c----cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCe-EEEEEchhhhhccCCCCCcchhhCCCCcccEEEEe
Confidence 1 257899999999999999998 6678889999999 799999986422 11111111 2246678
Q ss_pred cCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhh-cCHHHHHHH
Q 012991 250 NLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFE-GGIDGIMQR 326 (452)
Q Consensus 250 s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~-~g~~~~~~~ 326 (452)
|++|. +|.+| +|+++++++++.. ........ ... .... ...+.+...+ .++...+.... .-....++.
T Consensus 243 SfSK~-~g~pGlRiG~~i~~~~l~~~-~~~~~~~~-~~~--~~~~-~~~~~s~~~q---~~~~~~l~~~~~~~~~~~~~~ 313 (402)
T TIGR03542 243 SFSKT-AGFTGVRLGWTVVPKELTYA-DGHSVIQD-WER--RQCT-KFNGASYPVQ---RAAEAAYAGEGLQPILEAISY 313 (402)
T ss_pred cCccc-cCCCCcceEEEEecHHHhhc-chhhHHHH-HHH--Hhhh-cccCCCHHHH---HHHHHHHcCcchhHHHHHHHH
Confidence 99995 77666 8999988776521 00000000 000 0000 0011222222 22233332100 013344566
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCC
Q 012991 327 NHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGAR 406 (452)
Q Consensus 327 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~ 406 (452)
++++++.+.+.|.+. ++++..+.+ ++++|+.++ ...+..++.+.|.++.||.+.++..+..
T Consensus 314 ~~~~~~~~~~~L~~~-~~~~~~~~~--~~f~~v~l~------~~~~~~~l~~~l~~~~gv~v~pg~~f~~---------- 374 (402)
T TIGR03542 314 YMENARILRKALEAA-GFKVYGGEH--APYLWVKTP------EGISSWDFFDFLLYQYHVVGTPGSGFGP---------- 374 (402)
T ss_pred HHHHHHHHHHHHHhc-CceecCCCc--eeEEEEECC------CCCCHHHHHHHHHHhCCEEEeCchhhCC----------
Confidence 677788888888875 666554433 779999987 3456678888877656999987655421
Q ss_pred CCCCCccceEEecccccCCHHHHHHHHHHHHHH
Q 012991 407 DKDGIITGYARISHQVYNTLEDYEKFRDAVILL 439 (452)
Q Consensus 407 ~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~ 439 (452)
...+++||++.. +++++++.++.|+++
T Consensus 375 ----~~~~~iRis~~~--~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 375 ----SGEGFVRFSAFG--KRENIVEACERIKEA 401 (402)
T ss_pred ----CCCCEEEEEecC--CHHHHHHHHHHHHhh
Confidence 235799999754 788899999988765
No 136
>PRK07777 aminotransferase; Validated
Probab=99.95 E-value=5.4e-25 Score=217.54 Aligned_cols=342 Identities=15% Similarity=0.135 Sum_probs=224.8
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhH----hCCC-CCC-cEEEecChhHH
Q 012991 38 HGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDL----INAD-DVG-EISLVDNATTA 110 (452)
Q Consensus 38 ~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~----~~~~-~~~-~i~~t~g~t~a 110 (452)
..++.|+.+.+. ..|..+.+++.+.+.. ... .|....+..++|+.++++ +|.+ +++ +|++|+|+++|
T Consensus 24 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~----~~~--~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~a 97 (387)
T PRK07777 24 TGAVNLGQGFPDEDGPPEMLEAAQEAIAG----GVN--QYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEA 97 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhc----CCC--CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHH
Confidence 578899887765 3455566666654432 111 232334456666666664 5653 233 79999999999
Q ss_pred HHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCC
Q 012991 111 AAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGK 189 (452)
Q Consensus 111 ~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~ 189 (452)
+.+++.++ +++||+|+++.|.|++....+ ...|.+++.+++... ...+.+ ++++++.+ .+
T Consensus 98 l~~~~~~~--------~~~gd~vli~~p~y~~~~~~~----~~~g~~~~~~~~~~~-~~~~~~d~~~l~~~~------~~ 158 (387)
T PRK07777 98 IAAAVLGL--------VEPGDEVLLIEPYYDSYAAVI----AMAGAHRVPVPLVPD-GRGFALDLDALRAAV------TP 158 (387)
T ss_pred HHHHHHHh--------cCCCCEEEEeCCCchhhHHHH----HHCCCEEEEeecCCc-cCCCcCCHHHHHHhc------Cc
Confidence 99988876 578999999999998865443 446888888865311 112234 88999888 46
Q ss_pred ceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCC------cccc-ccc-cCccEEEEcCcccCcCC
Q 012991 190 MIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGS------IKID-VKE-IGADFYVSNLHKWFFCP 258 (452)
Q Consensus 190 ~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~------~~~~-~~~-~~~d~~~~s~~K~l~g~ 258 (452)
++++|++++++||||..++ +++|.++|+++++ ++|+|++++... .++. +.. .+.++++.|++|. +|.
T Consensus 159 ~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~-~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~g~ 236 (387)
T PRK07777 159 RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDL-LVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKT-FNV 236 (387)
T ss_pred ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCc-EEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhh-ccC
Confidence 7899999999999999986 6678999999999 799999986422 1111 111 2357889999996 665
Q ss_pred CC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 012991 259 PS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMAR 336 (452)
Q Consensus 259 ~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~ 336 (452)
+| +|+++.++++++. + ..... ......+...+.++..++..... -.+.+++.++++++.+.+
T Consensus 237 ~GlRiG~~~~~~~l~~~-~-~~~~~-----------~~~~~~~~~~q~~~~~~l~~~~~---~~~~~~~~~~~~~~~l~~ 300 (387)
T PRK07777 237 TGWKIGWACGPAPLIAA-V-RAAKQ-----------YLTYVGGAPFQPAVAHALDHEDA---WVAALRDSLQAKRDRLAA 300 (387)
T ss_pred cCceeEEEecCHHHHHH-H-HHHHh-----------hcccCCCCHHHHHHHHHHhCCcH---HHHHHHHHHHHHHHHHHH
Confidence 66 7888888776654 1 11100 00011122222222223322111 245667788899999999
Q ss_pred HHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceE
Q 012991 337 MLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYA 416 (452)
Q Consensus 337 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i 416 (452)
.|.+. ++++..++. ++++|+.++.. ...++.++++.|.+++||.+.++..+.... ....+++
T Consensus 301 ~L~~~-~~~~~~~~g--~~~~~~~~~~~----~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~-----------~~~~~~~ 362 (387)
T PRK07777 301 GLAEA-GFEVHDSAG--TYFLCADPRPL----GYDDGTEFCRALPERVGVAAIPMSVFYDPA-----------DAWNHLV 362 (387)
T ss_pred HHHhC-CCCccCCCc--ceEEEeccccc----CCCCHHHHHHHHHHhCCEEEeCchHhCCCC-----------cCCCCeE
Confidence 99886 777665543 66777776410 123567899999755799997765442100 1234689
Q ss_pred EecccccCCHHHHHHHHHHHHHHHhc
Q 012991 417 RISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 417 Ris~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
||+++. .+++++..++.|++++.+
T Consensus 363 Ri~~~~--~~~~l~~~l~~l~~~~~~ 386 (387)
T PRK07777 363 RFAFCK--RDDTLDEAIRRLRALRGR 386 (387)
T ss_pred EEEecC--CHHHHHHHHHHHHHHhcC
Confidence 999985 688899999999887654
No 137
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.95 E-value=3.1e-25 Score=219.70 Aligned_cols=336 Identities=14% Similarity=0.087 Sum_probs=220.6
Q ss_pred CCCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh----CCC---CC-CcEEEecC
Q 012991 36 HQHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI----NAD---DV-GEISLVDN 106 (452)
Q Consensus 36 ~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~---~~-~~i~~t~g 106 (452)
.+.+++.|+.+.+. ..|+.+.+++.+..... ..|....+..++|+++++++ +.+ ++ ++|++|+|
T Consensus 26 ~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~-------~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~G 98 (393)
T TIGR03538 26 ASKPPIALSIGEPKHPTPAFVLEALRENLHGL-------STYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNG 98 (393)
T ss_pred cCCCeEEecCCCCCCCCCHHHHHHHHHHhhcc-------CCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCC
Confidence 46789999888776 46777888888764322 12333344667777788776 322 25 47999999
Q ss_pred hhHHHHHHHHHhhcccccCCCCCCCE--EEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhc
Q 012991 107 ATTAAAIVLQQIGRGFTEGRFHRNDT--VLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEK 183 (452)
Q Consensus 107 ~t~a~~~~~~~l~~~~~~~~~~~g~~--Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~ 183 (452)
+++++.+++.++ +++||. |+++.|.|...... +...|.+++.+++. .++...+ .+.+++.+
T Consensus 99 a~~al~~~~~~l--------~~~gd~~~vlv~~P~y~~~~~~----~~~~g~~~~~v~~~--~~~~~~~d~~~l~~~~-- 162 (393)
T TIGR03538 99 TREALFAFAQAV--------INPGQAPLVVMPNPFYQIYEGA----ALLAGAEPYFLNCT--AENGFLPDFDAVPESV-- 162 (393)
T ss_pred cHHHHHHHHHHH--------cCCCCcceEEecCCCCcchHHH----HHhcCCeEEEeecc--ccCCCCCCHHHHHHHH--
Confidence 999999999987 478875 89999999875443 45579999999652 1111233 78888887
Q ss_pred cccCCCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCc-----ccc----cc-----ccCccE
Q 012991 184 GKKDGKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSI-----KID----VK-----EIGADF 246 (452)
Q Consensus 184 ~~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~-----~~~----~~-----~~~~d~ 246 (452)
.+++++|++++|+||||.+++ +++|+++|++|++ ++|+|+++..... +.. .. ...-.+
T Consensus 163 ----~~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~-~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi 237 (393)
T TIGR03538 163 ----WRRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGF-IIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCL 237 (393)
T ss_pred ----hhcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCE-EEEECcchhhcccCCCCCCcCHHHhcccccccccccEE
Confidence 357899999999999999998 5678888999999 7999999763221 111 00 111237
Q ss_pred EEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHH
Q 012991 247 YVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIM 324 (452)
Q Consensus 247 ~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~ 324 (452)
++.|++|. ++.+| +|+++.++++++. + ..+. .......+...+.++.+++.. . ..++..+
T Consensus 238 ~i~S~SK~-~~~~GlRvG~~i~~~~l~~~-~-~~~~-----------~~~~~~~~~~~q~~~~~~l~~-~---~~~~~~~ 299 (393)
T TIGR03538 238 VFHSLSKR-SNLPGLRSGFVAGDAEILKA-F-LRYR-----------TYHGCAMPIPTQLASIAAWND-E---QHVRENR 299 (393)
T ss_pred EEecchhh-cCCcccceEEEecCHHHHHH-H-HHHH-----------HhhccCcCHHHHHHHHHHhcC-h---HHHHHHH
Confidence 88899995 55555 8998888777664 1 1110 000011222222222222211 1 1356667
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCC
Q 012991 325 QRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAG 404 (452)
Q Consensus 325 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~ 404 (452)
+.++++++.+.+.|.+. +.+..|.+ +.++|+.++ .+..++.+.|.+++||.+.++..+..... +
T Consensus 300 ~~~~~~~~~~~~~L~~~--~~~~~p~g--g~f~~~~~~--------~~~~~~~~~l~~~~gV~v~pg~~f~~~~~-~--- 363 (393)
T TIGR03538 300 ALYREKFAAVLEILGQV--LDLELPDA--GFYLWPKVP--------GDDEAFARALYEEENVTVLPGRFLAREAE-G--- 363 (393)
T ss_pred HHHHHHHHHHHHHHHhh--CcccCCCe--eEEEEEECC--------CCHHHHHHHHHHHCCEEEeCCcccccccc-C---
Confidence 77788888888888764 33334443 788999885 13467888876657999976654421000 0
Q ss_pred CCCCCCCccceEEecccccCCHHHHHHHHHHHHHH
Q 012991 405 ARDKDGIITGYARISHQVYNTLEDYEKFRDAVILL 439 (452)
Q Consensus 405 ~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~ 439 (452)
.....+++|||+.. +.++++..+++|+++
T Consensus 364 ----~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 364 ----VNPGEGRVRIALVA--PLEECVEAAERIRSF 392 (393)
T ss_pred ----CCCCCCEEEEEecC--CHHHHHHHHHHHHHh
Confidence 01234799999975 688899999888764
No 138
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.95 E-value=2.3e-25 Score=223.94 Aligned_cols=358 Identities=12% Similarity=0.107 Sum_probs=228.2
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHHh-c-----CCchhhhhhhhHHHHHHHHHHHhHhC--------CCCCCcEEE
Q 012991 38 HGVARINNGSFGSCPKSVLADQQKWQLKFL-Q-----QPDDFYFNSLRKGILESRAAVKDLIN--------ADDVGEISL 103 (452)
Q Consensus 38 ~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~la~~~~--------~~~~~~i~~ 103 (452)
.++|.|+.+.....+..+.+.++....... . .+.....|....+..++|++++++++ ++ +++|++
T Consensus 38 ~g~i~L~~~En~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~-~~~Iii 116 (468)
T PLN02450 38 SGIIQMGLAENQLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFD-PNKLVL 116 (468)
T ss_pred CeeEEeehhHhHhhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcC-hHHeEE
Confidence 368999988766666545555544322110 0 01122224444566778888888875 33 789999
Q ss_pred ecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHh
Q 012991 104 VDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIE 182 (452)
Q Consensus 104 t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~ 182 (452)
|+|+++++..++.++ +++||.|++++|.|+.+...+. ...|++++.+++.. ++...+ ++.++++++
T Consensus 117 t~Ga~~al~~l~~~l--------~~pGd~Vlv~~P~Y~~~~~~~~---~~~g~~~v~v~~~~--~~~~~~~~~~le~~~~ 183 (468)
T PLN02450 117 TAGATSANETLMFCL--------AEPGDAFLLPTPYYPGFDRDLK---WRTGVEIVPIHCSS--SNGFQITESALEEAYQ 183 (468)
T ss_pred ccChHHHHHHHHHHh--------CCCCCEEEECCCCCCchHHHHh---hcCCcEEEEEecCC--ccCCcCCHHHHHHHHH
Confidence 999999999999987 5899999999999988755553 23688998886521 122233 677887775
Q ss_pred ccccCCCceEEEEEeccCCCCcccccHH---HHHHHHHHcCCCEEEEecccccCCc---c----cccc---------ccC
Q 012991 183 KGKKDGKMIRLAIIDHITSMPCVVIPVR---KLVKICRDEGVDQVFVDAAHAMGSI---K----IDVK---------EIG 243 (452)
Q Consensus 183 ~~~~~~~~~~lv~~~~~~n~tG~~~~l~---~i~~l~~~~~~~~~ivD~a~~~g~~---~----~~~~---------~~~ 243 (452)
+....+.++++|++++|+||||.+++.+ +|.++|+++++ ++|+|++++.-.. + +... ...
T Consensus 184 ~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~-~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~ 262 (468)
T PLN02450 184 QAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNI-HLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSN 262 (468)
T ss_pred HHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCc-EEEEEccccccccCCCCcccHHHHhhhcccccCCCCC
Confidence 3222245899999999999999999855 67888999999 7999999873211 1 1110 112
Q ss_pred ccEEEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHH
Q 012991 244 ADFYVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGID 321 (452)
Q Consensus 244 ~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~ 321 (452)
-.+++.|++|. +|.+| +|+++.+++.+...+ ... . ..+..+...+.++..+++.-.....-++
T Consensus 263 ~vi~l~S~SK~-~~l~GlRiG~li~~~~~l~~~~-~~~-----------~--~~~~~s~~~Q~a~~~~L~~~~~~~~~l~ 327 (468)
T PLN02450 263 RVHIVYSLSKD-LGLPGFRVGAIYSNDEMVVSAA-TKM-----------S--SFGLVSSQTQYLLSALLSDKKFTKNYLE 327 (468)
T ss_pred cEEEEEecccc-CCCCCccEEEEEECCHHHHHHH-HHH-----------h--hcCCCCHHHHHHHHHHhCCchhHHHHHH
Confidence 34778899996 56556 899988755432201 000 0 0011222333333333321100000145
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCC
Q 012991 322 GIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQP 401 (452)
Q Consensus 322 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~ 401 (452)
..++++++.++.+.+.|.+. ++.+..+.. +.++|+.++.......-....++.+.|.++.||.+.++..+..
T Consensus 328 ~~~~~l~~rr~~l~~~L~~~-gi~~~~~~~--g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~----- 399 (468)
T PLN02450 328 ENQKRLKQRQKKLVSGLEAA-GIKCLKSNA--GLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHC----- 399 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCcccCCCc--eEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCC-----
Confidence 56777888888899999887 776655444 6789998863211111112345677776657999987665421
Q ss_pred CCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhcc
Q 012991 402 QAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEEG 443 (452)
Q Consensus 402 ~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~~ 443 (452)
..++++|++++. .+.++++..+++|++++...
T Consensus 400 ---------~~~g~~Rl~f~~-~~~~~l~~~l~ri~~~l~~~ 431 (468)
T PLN02450 400 ---------TEPGWFRVCFAN-MSEETLDLAMKRLKSFVESD 431 (468)
T ss_pred ---------CCCCEEEEEecC-CCHHHHHHHHHHHHHHHHhc
Confidence 336799999985 35788999999999988643
No 139
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.95 E-value=2e-25 Score=222.70 Aligned_cols=355 Identities=12% Similarity=0.128 Sum_probs=229.9
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHHh---c---CCchhhhhhhhHHHHHHHHHHHhHhC--------CCCCCcEEE
Q 012991 38 HGVARINNGSFGSCPKSVLADQQKWQLKFL---Q---QPDDFYFNSLRKGILESRAAVKDLIN--------ADDVGEISL 103 (452)
Q Consensus 38 ~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~la~~~~--------~~~~~~i~~ 103 (452)
.++|.|+.+.....-..+.+.+........ . .+.....+....+..++|+++|++++ + ++++|++
T Consensus 47 ~g~i~l~~aeN~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v-~p~~Ivi 125 (447)
T PLN02607 47 SGVIQMGLAENQVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARF-DPDRIVL 125 (447)
T ss_pred CceEEEechhhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCc-CHHHeEE
Confidence 358888888766766666666655432110 0 01111113334567788888888775 3 3789999
Q ss_pred ecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHh
Q 012991 104 VDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIE 182 (452)
Q Consensus 104 t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~ 182 (452)
|+|+++|+.+++.++ +.+||.|+++.|.|+++...+. .+.|++++.++++. ++...+ ++.++++++
T Consensus 126 t~G~t~al~~l~~~l--------~~pGD~Vlv~~P~Y~~f~~~~~---~~~g~~vv~v~~~~--~~~f~~~~~~le~a~~ 192 (447)
T PLN02607 126 TAGATAANELLTFIL--------ADPGDALLVPTPYYPGFDRDLR---WRTGVKIVPIHCDS--SNNFQVTPQALEAAYQ 192 (447)
T ss_pred cCChHHHHHHHHHHh--------CCCCCEEEEcCCCCcchHHHHH---hcCCcEEEEEeCCC--CCCCcCCHHHHHHHHH
Confidence 999999999998876 5899999999999998765543 24688888886531 122234 788888886
Q ss_pred ccccCCCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCc---cc-ccc---------c-cCcc
Q 012991 183 KGKKDGKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSI---KI-DVK---------E-IGAD 245 (452)
Q Consensus 183 ~~~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~---~~-~~~---------~-~~~d 245 (452)
+.+..+.++++|++++|+||||..+| +++|.++|+++++ .+|+|++++.... ++ .+. . ..--
T Consensus 193 ~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i-~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v 271 (447)
T PLN02607 193 EAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNI-HLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERV 271 (447)
T ss_pred HHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCC-EEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcE
Confidence 54444568999999999999999998 5678889999999 7999999874321 11 110 0 1123
Q ss_pred EEEEcCcccCcCCCC--cEEEEE-ecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHH---HHHHhhcC
Q 012991 246 FYVSNLHKWFFCPPS--VAFLYC-RKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVT---FVSRFEGG 319 (452)
Q Consensus 246 ~~~~s~~K~l~g~~G--~G~l~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~---~~~~~~~g 319 (452)
+++.|++|. +|.+| +|+++. +++++.. + ... . . .+..+...+.++...++ +... -
T Consensus 272 ~vi~s~SK~-fg~~GlRvG~ivs~n~~l~~~-~-~~~-~-----------~-~~~~s~~~q~~~~~~L~d~~~~~~---~ 332 (447)
T PLN02607 272 HIVYSLSKD-LGLPGFRVGTIYSYNDKVVTT-A-RRM-S-----------S-FTLVSSQTQHLLASMLSDEEFTEN---Y 332 (447)
T ss_pred EEEEcchhc-CCCCcceEEEEEEcCHHHHHH-H-HHH-h-----------h-cCCCCHHHHHHHHHHhCCchhHHH---H
Confidence 567799995 67667 788887 4444432 1 000 0 0 01112222222222222 1111 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCC
Q 012991 320 IDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDG 399 (452)
Q Consensus 320 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~ 399 (452)
++..++++.+..+.+.+.|.+. ++.+..+.+ +.++|+.++............++.+.|.++.||.+.++..+.
T Consensus 333 l~~~r~~l~~~~~~~~~~L~~~-gi~~~~~~a--g~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~---- 405 (447)
T PLN02607 333 IRTNRERLRKRYEMIVQGLRRA-GIECLKGNA--GLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCH---- 405 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCCcccCCe--eEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccC----
Confidence 4456677777888888888876 776555443 889999986321111112234677777665799997766542
Q ss_pred CCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhccc
Q 012991 400 QPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEEGQ 444 (452)
Q Consensus 400 ~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~~~ 444 (452)
...++|+|++++. .++++++..+++|+++++...
T Consensus 406 ----------~~~~g~fRi~fa~-~~~~~l~~gl~Ri~~~l~~~~ 439 (447)
T PLN02607 406 ----------CSEPGWFRVCFAN-MSEDTLEVALKRIHRFMDRRK 439 (447)
T ss_pred ----------CCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHHH
Confidence 1347899999985 258889999999999987654
No 140
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.95 E-value=8.2e-25 Score=217.11 Aligned_cols=346 Identities=13% Similarity=0.058 Sum_probs=224.4
Q ss_pred cCCCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhh--hhhhHHHHHHHHHHHhHhCCC-CCCcEEEecChhHH
Q 012991 35 HHQHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYF--NSLRKGILESRAAVKDLINAD-DVGEISLVDNATTA 110 (452)
Q Consensus 35 ~~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~la~~~~~~-~~~~i~~t~g~t~a 110 (452)
..+..++.|+.+.+. +.|+.+.+++.+.+... . ..|. .+..++.+.+.+.+++.+|.+ ++++|++|+|+++|
T Consensus 30 ~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~---~-~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~a 105 (402)
T PRK06107 30 AAGRSIVDLTVGEPDFDTPDHIKQAAVAAIERG---E-TKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQA 105 (402)
T ss_pred hccCCEEEcCCCCCCCCCCHHHHHHHHHHHHcC---C-CCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHH
Confidence 346778999988876 34566778877766421 1 1111 122334445555555555653 36799999999999
Q ss_pred HHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCC
Q 012991 111 AAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGK 189 (452)
Q Consensus 111 ~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~ 189 (452)
+..++.++ +++||+|++++|.|.+....+ ...+..+..++++ .++...+ ++.+++.+ .+
T Consensus 106 l~~~~~~~--------~~~gd~vl~~~p~y~~y~~~~----~~~~~~~~~v~~~--~~~~~~~~~~~l~~~~------~~ 165 (402)
T PRK06107 106 IFLALMAT--------LEAGDEVIIPAPYWVSYPDMV----LANDGTPVIVACP--EEQGFKLTPEALEAAI------TP 165 (402)
T ss_pred HHHHHHHh--------cCCCCEEEEecCCCcCHHHHH----HHcCCEEEEecCC--cccCCCCCHHHHHhhc------Cc
Confidence 99999865 589999999999887764444 3346677777542 1222234 78899888 46
Q ss_pred ceEEEEEeccCCCCcccccH---HHHHHHHHHc-CCCEEEEecccccCCc---c-ccccc-----cCccEEEEcCcccCc
Q 012991 190 MIRLAIIDHITSMPCVVIPV---RKLVKICRDE-GVDQVFVDAAHAMGSI---K-IDVKE-----IGADFYVSNLHKWFF 256 (452)
Q Consensus 190 ~~~lv~~~~~~n~tG~~~~l---~~i~~l~~~~-~~~~~ivD~a~~~g~~---~-~~~~~-----~~~d~~~~s~~K~l~ 256 (452)
++++|++++|+||||..++. ++|+++|+++ ++ ++|+|++++.... + ..+.. .+..+++.|++|. +
T Consensus 166 ~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~-~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~-~ 243 (402)
T PRK06107 166 RTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHV-LVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKT-Y 243 (402)
T ss_pred CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCe-EEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchh-h
Confidence 78999999999999999975 5668888998 99 7999998853211 0 11111 1234677899996 6
Q ss_pred CCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 012991 257 CPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKM 334 (452)
Q Consensus 257 g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l 334 (452)
+.+| +|+++.++++++. + .... ......++...+.++..+++.... -.+..++.+.++++.+
T Consensus 244 ~~pGlRiG~~~~~~~~~~~-~-~~~~-----------~~~~~~~s~~~q~~~~~~l~~~~~---~~~~~~~~~~~~~~~~ 307 (402)
T PRK06107 244 AMTGWRIGYAAGPADLIAA-I-NKLQ-----------SQSSSCPSSISQAAAAAALNGDQS---FVTESVAVYKQRRDYA 307 (402)
T ss_pred cCcccceeeeecCHHHHHH-H-HHHH-----------HhcccCCChHHHHHHHHHhcCChH---HHHHHHHHHHHHHHHH
Confidence 7666 6999888877765 1 1110 000122333333333333321111 2456677778888888
Q ss_pred HHHHHHHcCCCcCCCcccccceEEEEcCCccc--cCCh---hhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCC
Q 012991 335 ARMLANAWGTSLGSPPEICAAMVMVGLPSRLR--VMGE---DDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKD 409 (452)
Q Consensus 335 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~ 409 (452)
.+.|.+++++.+..|++ +.++|+.++.... ...+ .+..++.+.|.+++||.+.++..+
T Consensus 308 ~~~L~~~~g~~~~~p~g--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~F--------------- 370 (402)
T PRK06107 308 LALLNAIPGLSCLVPDG--AFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAY--------------- 370 (402)
T ss_pred HHHHhcCCCCcccCCCc--ceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCcccc---------------
Confidence 89888766766655544 6777877631100 0011 145567766655579999876654
Q ss_pred CCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 410 GIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 410 ~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
..++++|++++. +.+++++.++.|++.++.
T Consensus 371 -g~~~~iRis~~~--~~e~l~~~l~~l~~~l~~ 400 (402)
T PRK06107 371 -GLSPYFRLSIAT--SLETLEEACARIERAVAA 400 (402)
T ss_pred -CCCCeEEEEeCC--CHHHHHHHHHHHHHHHHh
Confidence 224799999995 789999999999988754
No 141
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.94 E-value=9.1e-26 Score=209.97 Aligned_cols=368 Identities=16% Similarity=0.135 Sum_probs=244.8
Q ss_pred CCCCCCHHHHHhhhccCCCCeEE-eccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCC-
Q 012991 20 LTRCISEAEIRDEFSHHQHGVAR-INNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINAD- 96 (452)
Q Consensus 20 ~~~~~~~~~ir~~~~~~~~~~~~-l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~- 96 (452)
.+++.-+.++++.-.. +...+ |..|-+. +.|+-|.+++.........+ .....++..++...+++++++++|..
T Consensus 14 ~~~~~vw~e~~~la~e--~~~~~~LgqGfp~~~~P~fv~ea~~~~~~~~~~~-qYt~~~G~p~L~~aL~k~~se~~~~~~ 90 (420)
T KOG0257|consen 14 TSKPYVWTEINRLAAE--HKVPNPLGQGFPDFPPPKFVTEAAKNAAKEPSTN-QYTRGYGLPQLRKALAKAYSEFYGGLL 90 (420)
T ss_pred ccCCcHHHHHHHHHHh--cCCCCcccCCCCCCCCcHHHHHHHHHHhccchhc-cccccCCchHHHHHHHHHHHHHhcccc
Confidence 3445667777776543 33444 8888777 88898999998887653111 11124677888888999999988743
Q ss_pred -CCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCC----CCChH
Q 012991 97 -DVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFP----LASEE 171 (452)
Q Consensus 97 -~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~----~~~~~ 171 (452)
..++|++|.|+.+++..+++++ +.+||+|++.+|.|.+....+.+ .|.+++.+++.-. ..++.
T Consensus 91 ~~~~eVlVT~GA~~ai~~~~~~l--------~~~GDeVii~eP~fd~Y~~~~~m----aG~tpv~v~~~~~~g~~~s~~~ 158 (420)
T KOG0257|consen 91 DPDDEVLVTAGANEAISSALLGL--------LNPGDEVIVFEPFFDCYIPQVVM----AGGTPVFVPLKPKEGNVSSSDW 158 (420)
T ss_pred CCcccEEEecCchHHHHHHHHHH--------cCCCCEEEEecCcchhhhhHHhh----cCCcceeeccccccccccCccc
Confidence 2468999999999999999887 69999999999999998777655 5989999876300 12233
Q ss_pred HH-HHHHHHHHhccccCCCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEeccccc----CC--ccc--cc
Q 012991 172 EI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAM----GS--IKI--DV 239 (452)
Q Consensus 172 ~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~----g~--~~~--~~ 239 (452)
.+ .++++..+ +++|++|++++|+||||.+++ +++|++||++||+ ++|.|+++.. |. ..+ ..
T Consensus 159 ~~D~~~le~~~------t~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~-lvisDevYe~~v~d~~~h~r~aslP 231 (420)
T KOG0257|consen 159 TLDPEELESKI------TEKTKAIILNTPHNPTGKVFSREELERIAELCKKHGL-LVISDEVYEWLVYDGNKHIRIASLP 231 (420)
T ss_pred cCChHHHHhhc------cCCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCE-EEEEhhHhHHHhhCCCcceeeecCC
Confidence 44 89999999 899999999999999999997 6789999999999 8999998754 22 111 11
Q ss_pred cccCccEEEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHH--HH-H
Q 012991 240 KEIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVT--FV-S 314 (452)
Q Consensus 240 ~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~--~~-~ 314 (452)
..+...+-++|++|+ +|.+| +|+++.++.+... ...-... . ..+.+...+-|..+++. +. .
T Consensus 232 gm~ertitvgS~gKt-f~~TGWrlGW~igp~~L~~~-~~~vh~~----------~--~~~~~Tp~q~A~a~a~~~~~~~~ 297 (420)
T KOG0257|consen 232 GMYERTITVGSFGKT-FGVTGWRLGWAIGPKHLYSA-LFPVHQN----------F--VFTCPTPIQEASAAAFALELACL 297 (420)
T ss_pred chhheEEEeccccce-eeeeeeeeeeeechHHhhhh-HHHHhhc----------c--ccccCcHHHHHHHHHHhhhhhcc
Confidence 122345677899996 99999 8998885544443 1111100 0 01111112222222222 21 1
Q ss_pred Hhhc-C-HHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCc--cc----cCChhhHHHHHHHHhhhcce
Q 012991 315 RFEG-G-IDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSR--LR----VMGEDDALRLRGHLRVRFGV 386 (452)
Q Consensus 315 ~~~~-g-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~l~~~L~~~~gI 386 (452)
..++ + ...+.+.++++++.+.+.|.++ |+++..|++ +.++|..++.. +. ..+..+...+..+|.++.|+
T Consensus 298 ~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~v~~p~g--ayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv 374 (420)
T KOG0257|consen 298 QPGGSYFITELVKEYKEKRDILAKALEEL-GLKVTGPEG--AYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGV 374 (420)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCC--ceEEEEeccccccCCcchhhccCCCceeeehhhhccCcE
Confidence 0100 2 3347788899999999999998 999998887 67777766511 11 11112344678888888899
Q ss_pred EeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHH
Q 012991 387 EVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVI 437 (452)
Q Consensus 387 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~ 437 (452)
.+-+++.+..... .....+.+|+++.- +.+-++...+.|+
T Consensus 375 ~~IP~saF~s~~~---------~~~~~~~~r~~~~k--~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 375 VVIPPSAFGSREH---------IKVAERLVRFCFCK--ADETLRKAIERLK 414 (420)
T ss_pred EEeCchhcCCchh---------hHHHHHHHHHHHHh--hHHHHHHHHHHHh
Confidence 8765555432210 01124567777763 5555777777776
No 142
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=7.2e-25 Score=215.29 Aligned_cols=331 Identities=15% Similarity=0.162 Sum_probs=223.6
Q ss_pred CHHHHHhhhccCCCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEE
Q 012991 25 SEAEIRDEFSHHQHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISL 103 (452)
Q Consensus 25 ~~~~ir~~~~~~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~ 103 (452)
...+.+..+. ...++.|+.+... ..|+.+.+++.+...... .|....+ .+++++++++++++ +++|++
T Consensus 25 ~~~~~~~~~~--~~~~i~l~~~~~~~~~~~~~~~al~~~~~~~~-------~Y~~~~g-~~lr~~ia~~~~~~-~~~i~~ 93 (371)
T PRK05166 25 TIEEVRARYG--VPRIAKLGSNENPLGPSPAVRRAFADIAELLR-------LYPDPQG-RALREAIAARTGVP-ADRIIL 93 (371)
T ss_pred CHHHHHHhcC--CcceEEcCCCCCCCCCCHHHHHHHHHHHHHhh-------cCCCCcH-HHHHHHHHHHhCcC-HHHEEE
Confidence 3455565564 4578899877544 456668888876543322 1222233 37999999999996 789999
Q ss_pred ecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHh
Q 012991 104 VDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIE 182 (452)
Q Consensus 104 t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~ 182 (452)
|+|+++++..++.++ +++||+|++..|+|+..... ++..|++++.+++ +.++.+ .+++++.+
T Consensus 94 t~G~~~~l~~~~~~~--------~~~gd~vli~~P~y~~~~~~----~~~~g~~~~~v~~----~~~~~~~~~~l~~~~- 156 (371)
T PRK05166 94 GNGSEDLIAVICRAV--------LRPGDRVVTLYPSFPLHEDY----PTMMGARVERVTV----TPDLGFDLDALCAAV- 156 (371)
T ss_pred cCCHHHHHHHHHHHh--------cCCCCEEEEcCCChHHHHHH----HHHcCCeEEEeec----CCCCCCCHHHHHHhh-
Confidence 999999999998876 58999999999999875433 4567999999954 333344 88898888
Q ss_pred ccccCCCceEEEEEeccCCCCcccccHHHHHHHHHH--cCCCEEEEecccccCCc----c--cc-cccc-CccEEEEcCc
Q 012991 183 KGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRD--EGVDQVFVDAAHAMGSI----K--ID-VKEI-GADFYVSNLH 252 (452)
Q Consensus 183 ~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~--~~~~~~ivD~a~~~g~~----~--~~-~~~~-~~d~~~~s~~ 252 (452)
.+++++|++++++||||.++|.+++.++++. .++ ++|+|+++..... + +. .... ...+++.|++
T Consensus 157 -----~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~-~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfS 230 (371)
T PRK05166 157 -----ARAPRMLMFSNPSNPVGSWLTADQLARVLDATPPET-LIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFS 230 (371)
T ss_pred -----hcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCc-EEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeech
Confidence 4678999999999999999998887777764 378 7999999753221 0 11 1111 1247888999
Q ss_pred ccCcCCCC--cEEEEEe-cCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHH
Q 012991 253 KWFFCPPS--VAFLYCR-KSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHE 329 (452)
Q Consensus 253 K~l~g~~G--~G~l~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~ 329 (452)
|. +|.+| +|++++. +++++. + .... . ....+...+ .+++..+.. .+.+++.++.+++
T Consensus 231 K~-~~l~GlRiG~~i~~~~~l~~~-~-~~~~-----------~--~~~~~~~~q---~~~~~~l~~-~~~~~~~~~~~~~ 290 (371)
T PRK05166 231 KA-YGLAGLRVGYGLVSDPELVGL-L-DRVR-----------T--PFNVNGAAQ---AAALAALDD-EEHLAKGVALALA 290 (371)
T ss_pred Hh-hhcchhheeeeecCCHHHHHH-H-HHhc-----------c--CCCCCHHHH---HHHHHHhcC-HHHHHHHHHHHHH
Confidence 96 66666 7887764 455443 1 1110 0 011222222 222222221 1135666677778
Q ss_pred HHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCC
Q 012991 330 QALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKD 409 (452)
Q Consensus 330 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~ 409 (452)
.++.+.+.|.+. ++.+. ++. ++++|+.++ .+..++.+.|.++ ||.+.++..+
T Consensus 291 ~r~~l~~~L~~~-g~~~~-p~~--g~fl~~~~~--------~~~~~l~~~l~~~-gi~v~p~~~~--------------- 342 (371)
T PRK05166 291 ERERLKKELAEM-GYRIA-PSR--ANFLFFDAR--------RPASAVAEALLRQ-GVIVKPWKQP--------------- 342 (371)
T ss_pred HHHHHHHHHHHC-cCeeC-CCc--CCEEEEeCC--------CCHHHHHHHHHHC-CeEEecCCCC---------------
Confidence 888899999887 66643 333 678888764 2456788998764 9998765432
Q ss_pred CCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 410 GIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 410 ~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
...+++|++++ +.++.+++.++|+++++
T Consensus 343 -~~~~~iRi~~~---~~~~~~~l~~~l~~i~~ 370 (371)
T PRK05166 343 -GFETFIRVSIG---SPEENDHFVAALDKVLE 370 (371)
T ss_pred -CCCCeEEEEcC---CHHHHHHHHHHHHHHhh
Confidence 23579999998 68889999999988753
No 143
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=8.2e-26 Score=220.07 Aligned_cols=282 Identities=11% Similarity=0.074 Sum_probs=196.1
Q ss_pred HHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCC-CEEEEeCCcchhHHHHHHHHHHhcCcEEEE
Q 012991 82 ILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRN-DTVLMLHCAFQAVKKSIQAYVTRAGGSVVE 160 (452)
Q Consensus 82 ~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g-~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~ 160 (452)
..++++++++++|++ +++|++|+|+++++.+++.++ .++| ++|+++.|+|...... ++..|++++.
T Consensus 59 ~~~l~~~~a~~~g~~-~~~I~~~~Gs~e~i~~~~~~~--------~~~g~~~vli~~P~y~~y~~~----~~~~G~~~~~ 125 (351)
T PRK01688 59 PKAVIENYAAYAGVK-PEQVLVSRGADEGIELLIRAF--------CEPGKDAILYCPPTYGMYSVS----AETIGVEIRT 125 (351)
T ss_pred hHHHHHHHHHHhCCC-HHHEEEcCCHHHHHHHHHHHh--------cCCCCCEEEEcCCCHHHHHHH----HHHcCCEEEE
Confidence 478999999999996 899999999999999999976 4676 8999999999865333 4567999999
Q ss_pred EeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHc--CCCEEEEecccccCCcc-
Q 012991 161 VQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDE--GVDQVFVDAAHAMGSIK- 236 (452)
Q Consensus 161 ~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~--~~~~~ivD~a~~~g~~~- 236 (452)
+++ +++..+ ++++++++ .++++|++++|+||||.+++.+++.++++.. ++ ++|+|+++.-....
T Consensus 126 v~~----~~~~~~d~~~l~~~~-------~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~-~vivDEay~~f~~~~ 193 (351)
T PRK01688 126 VPT----LDNWQLDLPAIADNL-------DGVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKA-IVVADEAYIEFCPQA 193 (351)
T ss_pred eec----CCCCCCCHHHHHHhc-------cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCc-EEEEECchhhcCCCC
Confidence 965 223334 78888766 3689999999999999999988877776542 68 79999997533211
Q ss_pred --cc-ccccCccEEEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHH
Q 012991 237 --ID-VKEIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVT 311 (452)
Q Consensus 237 --~~-~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 311 (452)
.+ +....--+++.|++|+ +|++| +|++++++++++. + ...... ...+.. +..++..
T Consensus 194 s~~~~~~~~~n~iv~rSfSK~-~glaGlRiGy~i~~~~~i~~-l-~~~~~~-------------~~v~~~---~~~~a~~ 254 (351)
T PRK01688 194 SLAGWLAEYPHLVILRTLSKA-FALAGLRCGFTLANEEVINL-L-LKVIAP-------------YPLSTP---VADIAAQ 254 (351)
T ss_pred ChHHHHhhCCCEEEEecchHh-hcCHHHHHhHHhCCHHHHHH-H-HhccCC-------------CCCCHH---HHHHHHH
Confidence 11 1112234778899995 78777 6999988888765 2 111000 011111 1222333
Q ss_pred HHHHh-hcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeee
Q 012991 312 FVSRF-EGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPI 390 (452)
Q Consensus 312 ~~~~~-~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~ 390 (452)
.+... .+-+++.++.+.+.++++.+.|.+++++..+.|+. ++++++.++ ++.++.+.|.+ +||.++.
T Consensus 255 ~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~--~nfi~~~~~---------~~~~l~~~L~~-~gi~vr~ 322 (351)
T PRK01688 255 ALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSE--TNYILARFT---------ASSAVFKSLWD-QGIILRD 322 (351)
T ss_pred HHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCC--CcEEEEEcC---------CHHHHHHHHHH-CCeEEEE
Confidence 33310 00134445666777888999998876664334443 778888774 35688898876 4999976
Q ss_pred cccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHH
Q 012991 391 HYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVI 437 (452)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~ 437 (452)
+..+. ..++++|||++ +.+|+++++++|+
T Consensus 323 ~~~~~---------------~~~~~iRis~~---~~~e~~~l~~al~ 351 (351)
T PRK01688 323 QNKQP---------------GLSNCLRITIG---TREECQRVIDALR 351 (351)
T ss_pred CCCcC---------------CCCCeEEEeCC---CHHHHHHHHHhhC
Confidence 43321 22579999998 7899999999874
No 144
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=1.8e-25 Score=218.21 Aligned_cols=279 Identities=13% Similarity=0.090 Sum_probs=194.5
Q ss_pred HHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCC-CEEEEeCCcchhHHHHHHHHHHhcCcEEEE
Q 012991 82 ILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRN-DTVLMLHCAFQAVKKSIQAYVTRAGGSVVE 160 (452)
Q Consensus 82 ~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g-~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~ 160 (452)
..++++++++++|++ +++|++|+|+++++.+++.++ .++| |+|++++|.|...... ++..|++++.
T Consensus 62 ~~~Lr~aia~~~~~~-~~~I~it~Gs~~~i~~~~~~~--------~~~g~d~vlv~~P~y~~y~~~----~~~~g~~v~~ 128 (354)
T PRK04635 62 PPELINAYSAYAGVA-PEQILTSRGADEAIELLIRAF--------CEPGQDSIACFGPTYGMYAIS----AETFNVGVKA 128 (354)
T ss_pred HHHHHHHHHHHhCcC-HHHEEEeCCHHHHHHHHHHHh--------cCCCCCeEEEcCCChHHHHHH----HHHcCCEEEE
Confidence 578999999999996 899999999999999999987 4677 8999999999864433 4667999999
Q ss_pred EeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHc-CCCEEEEecccccCCcc--
Q 012991 161 VQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDE-GVDQVFVDAAHAMGSIK-- 236 (452)
Q Consensus 161 ~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~-~~~~~ivD~a~~~g~~~-- 236 (452)
++++ +++.+ .+.++ .+ +++++|++++|+||||.++|.+++.++++.. ++ ++|+|+++......
T Consensus 129 v~~~----~~~~~~~~~l~-~~-------~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~-~vivDeay~~~~~~~s 195 (354)
T PRK04635 129 LPLT----ADYQLPLDYIE-QL-------DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDA-IVVVDEAYIEFCPEYS 195 (354)
T ss_pred EecC----CCCCCCHHHHH-hc-------cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCc-EEEEeCchHhhccCcc
Confidence 9653 22233 56554 22 4789999999999999999999999998764 68 79999997533211
Q ss_pred -cccc-ccCccEEEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHH
Q 012991 237 -IDVK-EIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTF 312 (452)
Q Consensus 237 -~~~~-~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 312 (452)
.++. ...--+++.|+||+ +|++| +|++++++++++. + ...... ...+. .....++..
T Consensus 196 ~~~~~~~~~~~iv~~S~SK~-~~l~GlRlG~~i~~~~~~~~-l-~~~~~~-------------~~~~~---~~~~~a~~~ 256 (354)
T PRK04635 196 VADLLASYPNLVVLRTLSKA-FALAGARCGFTLANEELIEI-L-MRVIAP-------------YPVPL---PVSEIATQA 256 (354)
T ss_pred hHHHHhhCCCEEEEechHHH-hhhhHHHHhhhhCCHHHHHH-H-HhhcCC-------------CCCCH---HHHHHHHHH
Confidence 1111 11223677899996 67666 7999998887765 2 111000 01111 112234444
Q ss_pred HHHhhcCH---HHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEee
Q 012991 313 VSRFEGGI---DGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVP 389 (452)
Q Consensus 313 ~~~~~~g~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~ 389 (452)
+... +. ++.++++++.++.+.+.|.+++++++..+ . ++++++.++ +..++.+.|.+ +||.++
T Consensus 257 l~~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~--g~f~~~~~~---------~~~~~~~~l~~-~gv~v~ 321 (354)
T PRK04635 257 LSEA--GLARMKFQVLDLNAQGARLQAALSMYGGAKVLEG-N--GNYVLAKFD---------DVDAVFKALWD-AGIVAR 321 (354)
T ss_pred Hhcc--cHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCC-C--CcEEEEECC---------CHHHHHHHHHH-CCEEEE
Confidence 4321 33 33445566777889999988755665543 2 568888775 34577787865 599997
Q ss_pred ecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHH
Q 012991 390 IHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILL 439 (452)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~ 439 (452)
.+... ..++++|+|++ +.+|+++++++|++.
T Consensus 322 ~~~~~----------------~~~~~lRis~~---~~e~~~~l~~al~~~ 352 (354)
T PRK04635 322 AYKDP----------------RLANCIRFSFS---NRAETDKLIGLIRNQ 352 (354)
T ss_pred ECCCC----------------CCCCeEEEEeC---CHHHHHHHHHHHHHh
Confidence 43211 23569999986 899999999999865
No 145
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.94 E-value=1.9e-25 Score=217.75 Aligned_cols=299 Identities=16% Similarity=0.176 Sum_probs=210.0
Q ss_pred hhhhHHHHHHHHHHHhHhCCC-----CCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHH
Q 012991 76 NSLRKGILESRAAVKDLINAD-----DVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAY 150 (452)
Q Consensus 76 ~~~~~~~~~~~~~la~~~~~~-----~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~ 150 (452)
+.......++++.++++++.. ..+++++++|+|+++..++.++ .++|++|+++++.|.++...+
T Consensus 32 ~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~--------~~~g~~vl~~~~~~~~~~~~~--- 100 (350)
T cd00609 32 YYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRAL--------LNPGDEVLVPDPTYPGYEAAA--- 100 (350)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHh--------CCCCCEEEEcCCCchhHHHHH---
Confidence 344455677777777777642 1468999999999999999877 477999999999999987665
Q ss_pred HHhcCcEEEEEeCCCCCCChHHH-H--HHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHH---HHHHHHcCCCEE
Q 012991 151 VTRAGGSVVEVQLPFPLASEEEI-I--NEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKL---VKICRDEGVDQV 224 (452)
Q Consensus 151 a~~~g~~v~~~~~~~~~~~~~~~-~--~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i---~~l~~~~~~~~~ 224 (452)
+..|.+++.++.. +.+.. . +.+++.+ .+++++|++++++|++|.+.|++++ .++|+++|+ ++
T Consensus 101 -~~~~~~~~~i~~~----~~~~~~~~~~~~~~~~------~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~-~~ 168 (350)
T cd00609 101 -RLAGAEVVPVPLD----EEGGFLLDLELLEAAK------TPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGI-LI 168 (350)
T ss_pred -HHCCCEEEEEecc----cccCCccCHHHHHhhc------CccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCe-EE
Confidence 4468999999653 22222 2 4455444 5789999999999999999987655 489999999 79
Q ss_pred EEecccccCCcc-------ccccccCccEEEEcCcccCc-CCCCcEEEEEec-CccccCCCCCceeccCCCCcccccccc
Q 012991 225 FVDAAHAMGSIK-------IDVKEIGADFYVSNLHKWFF-CPPSVAFLYCRK-SILSSDMHHPVVSHEFGNGLPIESAWI 295 (452)
Q Consensus 225 ivD~a~~~g~~~-------~~~~~~~~d~~~~s~~K~l~-g~~G~G~l~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~ 295 (452)
|+|++++.+... ......+.|+++.|++|+++ ++.++|++++++ ++.+. + .... ....
T Consensus 169 ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~-~-~~~~-----------~~~~ 235 (350)
T cd00609 169 ISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLER-L-KKLL-----------PYTT 235 (350)
T ss_pred EEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHH-H-HHHH-----------Hhcc
Confidence 999998764421 22334567899999999865 455589999988 55554 1 1110 0012
Q ss_pred cccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHH
Q 012991 296 GTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALR 375 (452)
Q Consensus 296 ~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (452)
++++...+.++..+++...+ +.+.++++++++++++.+.|.+.+...+..+ ..+.++++.++ ...+...
T Consensus 236 ~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~g~~~~~~~~------~~~~~~~ 304 (350)
T cd00609 236 SGPSTLSQAAAAAALDDGEE---HLEELRERYRRRRDALLEALKELGPLVVVKP--SGGFFLWLDLP------EGDDEEF 304 (350)
T ss_pred cCCChHHHHHHHHHHhCcHH---HHHHHHHHHHHHHHHHHHHHHhcCCccccCC--CccEEEEEecC------CCChHHH
Confidence 34455555555555554422 5788888999999999999998754443222 23678888776 2234556
Q ss_pred HHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHH
Q 012991 376 LRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVIL 438 (452)
Q Consensus 376 l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~ 438 (452)
+.+.|.+ +||.+.....+.. ..+.++|++++.. .+|+++++++|++
T Consensus 305 ~~~~l~~-~gi~i~~~~~~~~--------------~~~~~iRi~~~~~--~~~i~~~~~al~~ 350 (350)
T cd00609 305 LERLLLE-AGVVVRPGSAFGE--------------GGEGFVRLSFATP--EEELEEALERLAE 350 (350)
T ss_pred HHHHHHh-CCEEEeccccccc--------------CCCCeEEEEeeCC--HHHHHHHHHHhhC
Confidence 6777754 6999875543311 2457999999986 9999999999863
No 146
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.94 E-value=2e-24 Score=228.32 Aligned_cols=352 Identities=17% Similarity=0.136 Sum_probs=255.7
Q ss_pred CCCCHHHHHhhhccC-CCCeEEeccCCCCC----CcHHHHHHHHHHHHHHhcC-Cchh-hhhhhhHHHHHHHHHHHhHhC
Q 012991 22 RCISEAEIRDEFSHH-QHGVARINNGSFGS----CPKSVLADQQKWQLKFLQQ-PDDF-YFNSLRKGILESRAAVKDLIN 94 (452)
Q Consensus 22 ~~~~~~~ir~~~~~~-~~~~~~l~~~~~~~----~p~~v~e~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~la~~~~ 94 (452)
..++..++.+++..+ ....+|++..+.|. .|..|.+++.+....+..+ |-.. .+.+..+.+.+.+..+++++|
T Consensus 83 ~~~sE~e~~~~~~~la~kN~~~~~fiG~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG 162 (993)
T PLN02414 83 EGLTESQMLEHMKSLASKNKVFKSYIGMGYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTG 162 (993)
T ss_pred CCCCHHHHHHHHHHHHhcCCccccccCCCCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhC
Confidence 356777777776532 23445777777666 8887778887765543222 1111 124455668899999999999
Q ss_pred CCCCCcEEEecChhHHHHHHHHHhhcccccCCCC--CCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHH
Q 012991 95 ADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFH--RNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEE 172 (452)
Q Consensus 95 ~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~--~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 172 (452)
++ ++++.++.++|++.+.++.++. ++ ++++|++++.+|+++...|..++++.|++++.++. ++.
T Consensus 163 ~~-~anaSL~d~aTAaaea~~~a~~-------~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~----~~~-- 228 (993)
T PLN02414 163 LP-MSNASLLDEGTAAAEAMAMCNN-------ILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADE----KDF-- 228 (993)
T ss_pred CC-hhhEeecCChHHHHHHHHHHHh-------cccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecc----hhh--
Confidence 96 8999999999999999988773 34 34789999999999999999889999999999943 110
Q ss_pred HHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccc-cccccCccEEEEcC
Q 012991 173 IINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKI-DVKEIGADFYVSNL 251 (452)
Q Consensus 173 ~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~-~~~~~~~d~~~~s~ 251 (452)
+ .. +..+..+++ +..|.+|.+.|+++|+++||++|+ ++++ +++..+...+ +...+|+|++++++
T Consensus 229 --~----~~------~~~v~~vlv-q~P~~~G~v~dv~~I~~~ah~~Ga-L~iV-aad~lal~~l~~pge~GADi~vgsg 293 (993)
T PLN02414 229 --D----YS------SGDVCGVLV-QYPATDGEVLDYAEFVKNAHANGV-KVVM-ATDLLALTMLKPPGEWGADIVVGSA 293 (993)
T ss_pred --c----cc------cCceEEEEE-ecCCCCeEEcCHHHHHHHHHHcCC-EEEE-EECHHHhcCCCCHhhccCcEEEECC
Confidence 1 11 234444544 444569999999999999999999 8999 8888887777 47888999999999
Q ss_pred cccC-----cCCCCcEEEEEecCccccCCCCC-ceec--cC-CCCc-------c--cccccccccCccccccHHHHHHHH
Q 012991 252 HKWF-----FCPPSVAFLYCRKSILSSDMHHP-VVSH--EF-GNGL-------P--IESAWIGTRDYSAQLVIPSAVTFV 313 (452)
Q Consensus 252 ~K~l-----~g~~G~G~l~~~~~~~~~~l~~~-~~~~--~~-~~~~-------~--~~~~~~~~~~~~~~~~~~~al~~~ 313 (452)
|||+ +||+ +|+++++++..+. +++ ...+ +. |... . ..+...+|.++....++.+++..+
T Consensus 294 qKwg~P~G~GGP~-aGflavr~~~~r~--~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~ 370 (993)
T PLN02414 294 QRFGVPMGYGGPH-AAFLATSQEYKRL--MPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAM 370 (993)
T ss_pred CccccCCCCCCCC-eeEEEECHHHHhh--CCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHH
Confidence 9985 3333 8999999988664 442 3222 10 1100 0 113457888988777777777544
Q ss_pred HH---hhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeee
Q 012991 314 SR---FEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPI 390 (452)
Q Consensus 314 ~~---~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~ 390 (452)
.. ...|++++.+++..+++++.+.|.+. |+++..++. ...+.|.++ +..++.+.|.++ ||.++.
T Consensus 371 y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~-G~~~~~~~~--f~~vt~~~~---------~~~~v~~~L~~~-gI~l~~ 437 (993)
T PLN02414 371 YAVYHGPEGLKTIAQRVHGLAGVFAAGLKKL-GFQVQSLPF--FDTVKVKCS---------DADAIADAAAKV-GINLRV 437 (993)
T ss_pred HHHHhccccHHHHHHHHHHHHHHHHHHHhhc-CCccCCCCC--cCeEEEecC---------CHHHHHHHHHHC-CCeeEE
Confidence 21 01399999999999999999999774 788766532 456667664 347899999775 997753
Q ss_pred cccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHH
Q 012991 391 HYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVIL 438 (452)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~ 438 (452)
.. .+.+|+|++.++|++||++++++|..
T Consensus 438 ~~--------------------~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 438 VD--------------------ANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred ec--------------------CCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 21 35799999999999999999999974
No 147
>PRK06855 aminotransferase; Validated
Probab=99.94 E-value=8.5e-25 Score=218.51 Aligned_cols=351 Identities=15% Similarity=0.122 Sum_probs=224.1
Q ss_pred CCCCeEEeccCCC---C-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh----CCC-CCCcEEEecC
Q 012991 36 HQHGVARINNGSF---G-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI----NAD-DVGEISLVDN 106 (452)
Q Consensus 36 ~~~~~~~l~~~~~---~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~-~~~~i~~t~g 106 (452)
.+..+++++.|.+ + ..|..+.+++.+.... + ..+.|....+..++|+++++++ |.+ ++++|++|+|
T Consensus 30 ~g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~----~-~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G 104 (433)
T PRK06855 30 LGVKITWENIGDPIAKGEKIPDWMKEIVAELVMD----D-KSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNG 104 (433)
T ss_pred ccccccccccCCCcccCCCCCHHHHHHHHHHhhc----C-CCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCc
Confidence 4567889987776 2 6777788888776532 1 2234555566788888888887 322 3689999999
Q ss_pred hhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccc
Q 012991 107 ATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGK 185 (452)
Q Consensus 107 ~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~ 185 (452)
+++++.+++. + +.+||.|++++|.|+...... ....|.+++.+++. .++...+ +++|++.++.
T Consensus 105 ~~~al~~~~~-l--------~~~Gd~Vlv~~P~Y~~~~~~~---~~~~g~~~v~v~~~--~~~~~~~d~~~l~~~~~~-- 168 (433)
T PRK06855 105 LGDAIAKIYG-L--------LRREARVIGPSPAYSTHSSAE---AAHAGYPPVTYRLD--PENNWYPDLDDLENKVKY-- 168 (433)
T ss_pred HHHHHHHHHH-h--------cCCCCeEEEeCCCCchHHHHH---HHhcCCeEEEEecc--cccCCCCCHHHHHHHHhc--
Confidence 9999998875 4 488999999999998743221 12347888888542 1122223 8999998853
Q ss_pred cCCCceEEEEEeccCCCCcccccH---HHHHHHHHHcCCCEEEEecccccCCc----ccccccc---CccEEEEcCcccC
Q 012991 186 KDGKMIRLAIIDHITSMPCVVIPV---RKLVKICRDEGVDQVFVDAAHAMGSI----KIDVKEI---GADFYVSNLHKWF 255 (452)
Q Consensus 186 ~~~~~~~lv~~~~~~n~tG~~~~l---~~i~~l~~~~~~~~~ivD~a~~~g~~----~~~~~~~---~~d~~~~s~~K~l 255 (452)
.++++++++++|+||||.+++. ++|+++|++||+ ++|.|++++.-.. ...+... +..+++.|++|.
T Consensus 169 --~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~-~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~- 244 (433)
T PRK06855 169 --NPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDL-FIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKE- 244 (433)
T ss_pred --CCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCC-EEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccc-
Confidence 2568999999999999999985 467888999999 7999999864321 1111111 234788899996
Q ss_pred cCCCC--cEEEEEec----CccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHh--hcCHHHHHHHH
Q 012991 256 FCPPS--VAFLYCRK----SILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRF--EGGIDGIMQRN 327 (452)
Q Consensus 256 ~g~~G--~G~l~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~--~~g~~~~~~~~ 327 (452)
++.+| +|++++.+ ..+.. +...... .... ...++...+.++. .++.+. +.-+++.++.+
T Consensus 245 ~~~pGlRiG~ii~p~~~~~~~~~~-~~~~~~~--------~~~~-~~~~~~~~Q~a~~---~~l~~~~~~~~~~~~~~~~ 311 (433)
T PRK06855 245 LPWPGSRCGWIEVYNADKDEVFKK-YINSILN--------AKMI-EVCSTTLPQMAIP---RIMSHPEYKNYLKERNKRY 311 (433)
T ss_pred cCCCcceEEEEEEeCCchhhHHHH-HHHHHHH--------hhcc-ccCCChHHHHHHH---HhhcCCcHHHHHHHHHHHH
Confidence 66566 88888732 11111 0000000 0000 0122233333333 333220 01255667777
Q ss_pred HHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccc-------cCC--------------hhhHHHHHHHHhhhcce
Q 012991 328 HEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLR-------VMG--------------EDDALRLRGHLRVRFGV 386 (452)
Q Consensus 328 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~--------------~~~~~~l~~~L~~~~gI 386 (452)
+++++.+.+.|.+++++.+..|.+ +.++|+.+|+... ..+ ..+..+++..|.++.||
T Consensus 312 ~~r~~~~~~~L~~~~~~~~~~p~g--g~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV 389 (433)
T PRK06855 312 EKRSNIAYEKLKDVPGLKVNRTNG--AFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGI 389 (433)
T ss_pred HHHHHHHHHHHhcCCCeeccCCCe--eEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCE
Confidence 888888889887766666555544 7889998874210 000 01244566555556799
Q ss_pred EeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 387 EVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 387 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
.+.++..+. .....+|||++. .+.++++..++.|++++++
T Consensus 390 ~v~PG~~F~---------------~~~~~~Rls~~~-~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 390 CVVPLSSFC---------------TELNGFRVTLLE-RDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred EEecCCcCC---------------CCCCceEEEECC-CcHHHHHHHHHHHHHHHHH
Confidence 987765552 122469999986 3689999999999998864
No 148
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.94 E-value=2.2e-25 Score=218.99 Aligned_cols=312 Identities=16% Similarity=0.179 Sum_probs=208.3
Q ss_pred hhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHH
Q 012991 73 FYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVT 152 (452)
Q Consensus 73 ~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~ 152 (452)
.|++...+..+++++++++++|++ +. +++++|+.|+.+++. + +++||+|+++++.|++.+..+..+++
T Consensus 47 ~y~r~~~p~~~~le~~lA~l~g~~--~~-v~~~sG~~ai~~~l~-~--------l~~Gd~Vlv~~~~y~~~~~~~~~~~~ 114 (390)
T PRK08064 47 DYSRSGNPTREALEDIIAELEGGT--KG-FAFASGMAAISTAFL-L--------LSKGDHVLISEDVYGGTYRMITEVLS 114 (390)
T ss_pred cccCCCChhHHHHHHHHHHHhCCC--Ce-EEECCHHHHHHHHHH-H--------hCCCCEEEEccCccchHHHHHHHHHH
Confidence 355566677899999999999985 44 555777788887775 3 48899999999999988888877678
Q ss_pred hcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEeccccc
Q 012991 153 RAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAM 232 (452)
Q Consensus 153 ~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~ 232 (452)
+.|++++.++. ++ ++++++++ ++++++|++++++||+|.+.|+++|.++|+++|+ ++++|++++.
T Consensus 115 ~~G~~v~~v~~----~d----~~~l~~~l------~~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~-~vvvD~a~~~ 179 (390)
T PRK08064 115 RFGIEHTFVDM----TN----LEEVAQNI------KPNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGC-LTFVDNTFLT 179 (390)
T ss_pred HcCCEEEEECC----CC----HHHHHHhc------CCCceEEEEECCCCCCcEeccHHHHHHHHHHcCC-EEEEECCCCc
Confidence 88999999943 22 67888888 5789999999999999999999999999999999 8999999887
Q ss_pred CCccccccccCccEEEEcCcccCcCCCC--cEEEEEec-CccccCCCCCceeccCCCCcccccccccccCccccccHHHH
Q 012991 233 GSIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRK-SILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSA 309 (452)
Q Consensus 233 g~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 309 (452)
+...... .+++|+++.|+||+++|+.| .|++++++ ++.+. + .+... .+ |.... +.- ...+
T Consensus 180 ~~~~~~~-~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~-l-~~~~~-~~-----------g~~~~-~~~-a~l~ 242 (390)
T PRK08064 180 PLLQKPL-DLGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQK-L-YFLQN-SF-----------GAVLG-VQD-CWLV 242 (390)
T ss_pred ccccCch-hhCCcEEEeecceeccCCccceeEEEEeCCHHHHHH-H-HHHHH-hc-----------CCCCC-HHH-HHHH
Confidence 6543222 45799999999999888776 47777764 44443 1 11110 00 11110 100 1111
Q ss_pred HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCC-CcCCCc--------------ccccceEEEEcCCccccCChhhHH
Q 012991 310 VTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGT-SLGSPP--------------EICAAMVMVGLPSRLRVMGEDDAL 374 (452)
Q Consensus 310 l~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~ 374 (452)
++-++ .+....++..+++..+.+.|++.+.+ ++..|. ...++++.|.+. +..+..
T Consensus 243 ~~gl~----tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~------~~~~~~ 312 (390)
T PRK08064 243 LRGLK----TLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQ------SEEAVR 312 (390)
T ss_pred HcccC----cHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEEC------CHHHHH
Confidence 11111 23345666778888888889887654 232221 135779999885 222344
Q ss_pred HHHHHHhhhcceEeeecccC-----CCCCCCCCCCCCCC--CCCccceEEecccccCCHHHHHHHHHHHHHH
Q 012991 375 RLRGHLRVRFGVEVPIHYQA-----PKDDGQPQAGARDK--DGIITGYARISHQVYNTLEDYEKFRDAVILL 439 (452)
Q Consensus 375 ~l~~~L~~~~gI~v~~~~~~-----~~~~~~~~~~~~~~--~~~~~~~iRis~~~~~t~~di~~l~~~l~~~ 439 (452)
.+.+.|. -+.+.++.+... +....+|.....++ .+..++.+|+|++.+++++.|+.+.++|+++
T Consensus 313 ~f~~~l~-l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 313 QFVSHVK-LPVFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSYV 383 (390)
T ss_pred HHHHhCC-cceEcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 4444441 122244443111 11112333322221 1345789999999998888899999999874
No 149
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.94 E-value=4.3e-25 Score=219.58 Aligned_cols=342 Identities=15% Similarity=0.111 Sum_probs=218.6
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh------CCCCCCcEEEecChhH
Q 012991 37 QHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI------NADDVGEISLVDNATT 109 (452)
Q Consensus 37 ~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~~i~~t~g~t~ 109 (452)
+..++.|+.+.+. ..|+.+.+++.+.+...... ...+.|....+..++|+++++++ +++ +++|++|+|+++
T Consensus 33 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~-~~~I~it~Ga~~ 110 (409)
T PRK07590 33 EAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTA-ETFRGYGPEQGYDFLREKIAENDYQARGCDIS-ADEIFISDGAKC 110 (409)
T ss_pred CCceEEecCcCCCCCCCHHHHHHHHHHHhccccc-CCccCCCCCCCCHHHHHHHHHHHHHhcCCcCC-hhhEEECCCHHH
Confidence 4678999888766 45666888888776543111 11223445566788888888875 564 789999999999
Q ss_pred HHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcE-----------EEEEeCCCCCCChHHH-HHHH
Q 012991 110 AAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGS-----------VVEVQLPFPLASEEEI-INEF 177 (452)
Q Consensus 110 a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~-----------v~~~~~~~~~~~~~~~-~~~l 177 (452)
++.++.. + +.+||+|++.+|+|+.....+. ..|.+ ++.+++ +.++.+ .+
T Consensus 111 al~~l~~-~--------~~~gd~V~v~~P~Y~~~~~~~~----~~g~~~~~~~~~~~~~~~~v~~----~~~~~~~~d-- 171 (409)
T PRK07590 111 DTGNILD-I--------FGPDNTIAVTDPVYPVYVDTNV----MAGRTGEANEDGRYSGIVYLPC----TAENNFVPE-- 171 (409)
T ss_pred HHHHHHH-h--------cCCCCEEEEeCCCCcchHHHHH----HcCCcccccccccccceeEeec----ccccCCccc--
Confidence 9988643 3 4799999999999998765554 35765 777744 211112 11
Q ss_pred HHHHhccccCCCceEEEEEeccCCCCcccccHH---HHHHHHHHcCCCEEEEecccccCC----cccccccc----CccE
Q 012991 178 KKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVR---KLVKICRDEGVDQVFVDAAHAMGS----IKIDVKEI----GADF 246 (452)
Q Consensus 178 ~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~---~i~~l~~~~~~~~~ivD~a~~~g~----~~~~~~~~----~~d~ 246 (452)
+. .+++++|++++|+||||.+++.+ +|+++|++|++ ++|+|++++.-. .+..+... +..+
T Consensus 172 ---~~-----~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~-~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi 242 (409)
T PRK07590 172 ---LP-----EEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGS-LILFDAAYEAFISDPSLPHSIYEIEGARECAI 242 (409)
T ss_pred ---Cc-----ccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCe-EEEEEccchhhccCCCCCcchhhCCCcccceE
Confidence 11 25789999999999999999855 67788999999 799999986321 11111111 1236
Q ss_pred EEEcCcccCcCCCC--cEEEEEecCccccCCCC-CceeccCCCCcccccccccccCccccccHHHHHHH-HHHhhcCHHH
Q 012991 247 YVSNLHKWFFCPPS--VAFLYCRKSILSSDMHH-PVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTF-VSRFEGGIDG 322 (452)
Q Consensus 247 ~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~~~g~~~ 322 (452)
++.|++|. +|.+| +|+++++++++.. +.. .......... ..........+...+.++..++.. ... -+++
T Consensus 243 ~~~SfSK~-~~~pGlRiG~~i~~~~li~~-~~~~~~~~~~~~~~-~~~~~~~~~~s~~~q~a~~~~l~~~~~~---~~~~ 316 (409)
T PRK07590 243 EFRSFSKT-AGFTGTRCAYTVVPKELKGK-TSDGEGVSLNSLWN-RRQSTKFNGVSYIVQRAAEAVYSPEGKA---QIKE 316 (409)
T ss_pred EEecCccc-cCCcCceeEEEEcCHHHhhh-ccccchhhhHHHHH-HHHhhcccCcCHHHHHHHHHHhcCCcHH---HHHH
Confidence 67899996 66566 8999988877762 100 0000000000 000000011222233333223321 011 2455
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCC
Q 012991 323 IMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQ 402 (452)
Q Consensus 323 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~ 402 (452)
+++.++++++.+.+.|... ++.+..+.. ++++|+.++ ...+..++.+.|.++.||.+.++..+..
T Consensus 317 ~~~~~~~~r~~l~~~L~~~-~~~~~~~~g--~~f~wi~~~------~~~~~~~~~~~l~~~~gv~v~pg~~f~~------ 381 (409)
T PRK07590 317 LIDYYMENAKIIREGLESA-GFEVYGGVN--APYIWVKTP------DGMSSWDFFDKLLQEANVVGTPGSGFGP------ 381 (409)
T ss_pred HHHHHHHHHHHHHHHHHhc-CCceecCCc--ceEEEEECC------CCCCHHHHHHHHHHHCCEEEeChhHhCC------
Confidence 6777788888899999886 666554433 778999987 3456678888876667999877655422
Q ss_pred CCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHH
Q 012991 403 AGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILL 439 (452)
Q Consensus 403 ~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~ 439 (452)
...+++||++. .+.++++..++.|+++
T Consensus 382 --------~~~~~iRi~~~--~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 382 --------SGEGYFRLSAF--GSRENVLEAMERIKKA 408 (409)
T ss_pred --------CCCCEEEEEcc--CCHHHHHHHHHHHHhh
Confidence 23469999964 3788999999998765
No 150
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.94 E-value=4.6e-25 Score=216.45 Aligned_cols=338 Identities=18% Similarity=0.204 Sum_probs=227.2
Q ss_pred CeEEeccCCCCCC--cHHHHHHHHHHHH-HHhcCCchhhhhhhhHHHHHHHHHHHhHhC------CCCCC-cEEEecChh
Q 012991 39 GVARINNGSFGSC--PKSVLADQQKWQL-KFLQQPDDFYFNSLRKGILESRAAVKDLIN------ADDVG-EISLVDNAT 108 (452)
Q Consensus 39 ~~~~l~~~~~~~~--p~~v~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~-~i~~t~g~t 108 (452)
.+|+|+.+..... ...+.+++++... .. .......|....+..+++++++++++ .+ .+ ++++++|+.
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~~i~~~~G~~ 78 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAA--TSSSFLGYPPPQGYPELREAIADFLGRRYGVPVD-PEANILVTSGAQ 78 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHH--HHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTT-GGEGEEEESHHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhh--cccccccCCCchhhHHHHHHHHHHhhhccCcccc-cceEEEEecccc
Confidence 4788887777643 2223333333322 11 11222345666788999999999999 54 56 899999988
Q ss_pred HHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccC
Q 012991 109 TAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKD 187 (452)
Q Consensus 109 ~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~ 187 (452)
+++..+...+. ..+++.|++++|.|+.....+ +..|.++..+++.. .+++.+ ++.|++.+++.+..
T Consensus 79 ~~~~~~~~~~~-------~~~~~~vlv~~P~y~~~~~~~----~~~g~~~~~~~~~~--~~~~~~d~~~l~~~l~~~~~~ 145 (363)
T PF00155_consen 79 AALFLLLRLLK-------INPGDTVLVPDPCYPSYIEAA----RLLGAEVIPVPLDS--ENDFHLDPEALEEALDELPSK 145 (363)
T ss_dssp HHHHHHHHHHH-------SSTTSEEEEEESSSTHHHHHH----HHTTSEEEEEEEEE--TTTTEETHHHHHHHHHTSHTT
T ss_pred cchhhhhhccc-------ccccccceecCCccccccccc----cccCceeeeccccc--ccccccccccccccccccccc
Confidence 88888777651 468999999999999876665 44699999986531 123333 89999999754332
Q ss_pred CCceEEEEEeccCCCCcccccHHHHHHH---HHHcCCCEEEEecccccCCcc--------ccccccCccEEEEcCcccCc
Q 012991 188 GKMIRLAIIDHITSMPCVVIPVRKLVKI---CRDEGVDQVFVDAAHAMGSIK--------IDVKEIGADFYVSNLHKWFF 256 (452)
Q Consensus 188 ~~~~~lv~~~~~~n~tG~~~~l~~i~~l---~~~~~~~~~ivD~a~~~g~~~--------~~~~~~~~d~~~~s~~K~l~ 256 (452)
+.++++|++++++||||..++.+++.++ |++||+ ++|+|++++..... .........+++.|++|. +
T Consensus 146 ~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~-~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~-~ 223 (363)
T PF00155_consen 146 GPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNI-IIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKS-F 223 (363)
T ss_dssp TETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTS-EEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTT-T
T ss_pred ccccceeeecccccccccccccccccchhhhhccccc-ceeeeeceeccccCCCccCcccccccccccceeeeecccc-c
Confidence 2267999999999999999987665555 999999 79999998764433 111111224788899995 6
Q ss_pred CCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 012991 257 CPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKM 334 (452)
Q Consensus 257 g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l 334 (452)
|.+| +|++++++++++. + .... . .+..+......+..++........-.++.+++++++++++
T Consensus 224 g~~GlRvG~i~~~~~~~~~-l-~~~~-----------~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l 288 (363)
T PF00155_consen 224 GLPGLRVGYIVAPPELIER-L-RRFQ-----------R--SGLSSSPMQAAAAAALSDPELVEKWLEELRERLRENRDLL 288 (363)
T ss_dssp TSGGGTEEEEEEEHHHHHH-H-HHHH-----------H--HTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccchhhhhhh-h-hhcc-----------c--cccccchhhHHHHHhhhcccccccccccchhhHHHHHHHH
Confidence 7676 8999998877765 1 1110 0 0111222222222233222210013567788888999999
Q ss_pred HHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccc
Q 012991 335 ARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITG 414 (452)
Q Consensus 335 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (452)
.+.|.+. ++.+..++. +.++|..++ ..+..++.+.|.++.||.+.++..+. . ++
T Consensus 289 ~~~L~~~-~~~~~~~~~--~~~~~~~~~-------~~~~~~l~~~L~~~~gi~v~pg~~~~---------------~-~~ 342 (363)
T PF00155_consen 289 REALEEI-GITVLPPEA--GFFLWVRLD-------PNDAEELAQELLEEYGILVRPGSYFG---------------V-PG 342 (363)
T ss_dssp HHHHHHT-TSEEEHHSB--SSEEEEEES-------HHHHHHHHHHHHHHHTEEEEEGGGGT---------------S-TT
T ss_pred HHHHHHh-hhheeeccC--ccEEEEEcc-------cchHHHHHHHHHHhCCEEEEecCCCC---------------C-CC
Confidence 9999887 777665553 667777664 33678899999876699998776652 2 67
Q ss_pred eEEecccccCCHHHHHHHHHHH
Q 012991 415 YARISHQVYNTLEDYEKFRDAV 436 (452)
Q Consensus 415 ~iRis~~~~~t~~di~~l~~~l 436 (452)
++|+++ ...+.+++++++++|
T Consensus 343 ~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 343 YIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp EEEEEG-GCSCHHHHHHHHHHH
T ss_pred EEEEEe-ccCCHHHHHHHHhhC
Confidence 999999 446999999999876
No 151
>PRK05839 hypothetical protein; Provisional
Probab=99.94 E-value=2.7e-24 Score=211.20 Aligned_cols=341 Identities=13% Similarity=0.089 Sum_probs=212.5
Q ss_pred CCHHHHHhhhcc---C-CCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHH----hHhC
Q 012991 24 ISEAEIRDEFSH---H-QHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVK----DLIN 94 (452)
Q Consensus 24 ~~~~~ir~~~~~---~-~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la----~~~~ 94 (452)
..+..+|+.+.. . +..++.|+.+.+. +.|+.+.+++.+..... . .|....+..++|++++ +.+|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~-----~--~Y~~~~G~~~lr~aia~~l~~~~g 78 (374)
T PRK05839 6 YPFEKLRELLKEITPNKEYKGLDLTIGEPQFETPKFIQDALKNNAHLL-----N--KYPKSAGEESLREAQRGFFKRRFK 78 (374)
T ss_pred chHHHHHHHHHHhhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHhhcc-----C--CCCCCCCCHHHHHHHHHHHHHHhC
Confidence 345666666542 2 5589999987766 45666777776643221 1 1222233445555554 4446
Q ss_pred CC-CCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH
Q 012991 95 AD-DVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI 173 (452)
Q Consensus 95 ~~-~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 173 (452)
.+ ++++|++|+|+++++..++.++. ..++|+.|+++.|.|+.....+ ...|++++.++.+. ++...
T Consensus 79 ~~~~~~~I~it~G~~~al~~~~~~~~------~~~~gd~vlv~~P~y~~~~~~~----~~~g~~v~~v~~~~--~~~~~- 145 (374)
T PRK05839 79 IELKENELIPTFGTREVLFNFPQFVL------FDKQNPTIAYPNPFYQIYEGAA----IASRAKVLLMPLTK--ENDFT- 145 (374)
T ss_pred CCCCcceEEEecCcHHHHHHHHHHHh------cCCCCCEEEECCCCchhhHHHH----HhcCCEEEEeeccc--ccCCc-
Confidence 32 37899999999999998888652 1157899999999998876555 44699999996521 11111
Q ss_pred HHHHHHHHhccccCCCceEEEEEeccCCCCcccccH---HHHHHHHHHcCCCEEEEecccccCCc--c----ccc-----
Q 012991 174 INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPV---RKLVKICRDEGVDQVFVDAAHAMGSI--K----IDV----- 239 (452)
Q Consensus 174 ~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l---~~i~~l~~~~~~~~~ivD~a~~~g~~--~----~~~----- 239 (452)
++..+..+ +++++|++++|+||||.+++. ++|+++|+++|+ ++|+|++++.-.. + ...
T Consensus 146 ~d~~~~~~-------~~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~-~ii~DE~Y~~~~~~~~~~s~~~~~~~~~ 217 (374)
T PRK05839 146 PSLNEKEL-------QEVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDF-ILINDECYSEIYENTPPPSLLEASILVG 217 (374)
T ss_pred CCcchhhh-------ccccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCC-EEEeccchhhcccCCCCCCHhhhhcccC
Confidence 22222222 358999999999999999985 467778899999 7999999764211 0 010
Q ss_pred -cccCccEEEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHh
Q 012991 240 -KEIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRF 316 (452)
Q Consensus 240 -~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~ 316 (452)
...+--+++.|++|. ++.+| +|+++.++++++. + .... .......+...+.++..++ ..
T Consensus 218 ~~~~~~vi~~~SfSK~-~~~~GlRiG~ii~~~~~~~~-~-~~~~-----------~~~~~~~~~~~q~~~~~~l---~~- 279 (374)
T PRK05839 218 NESFKNVLVINSISKR-SSAPGLRSGFIAGDASILKK-Y-KAYR-----------TYLGCASPLPLQKAAAVAW---LD- 279 (374)
T ss_pred ccccCcEEEEeccccc-cCCccceeEEEecCHHHHHH-H-HHHH-----------hhcCCCCChHHHHHHHHHh---cc-
Confidence 111234778899995 66666 8998887776664 1 1110 0000111222222222222 11
Q ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCC
Q 012991 317 EGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPK 396 (452)
Q Consensus 317 ~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~ 396 (452)
..-.+.++++++++++.+.+.| ++. .|++ +.++|++++ +..++.+.|.+++||.+.++..+..
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~l----~~~--~p~g--g~fi~~~~~---------~~~~~~~~l~~~~gi~v~pg~~f~~ 342 (374)
T PRK05839 280 DEHAEFFRNIYAKNLKLAREIL----GIT--IPPA--TFYVWLPVD---------NDEEFTKKLYQNEGIKVLPGSFLGR 342 (374)
T ss_pred chHHHHHHHHHHHHHHHHHHhc----CCC--CCCe--eEEEEEeCC---------ChHHHHHHHHHHCCEEEeCchhhCC
Confidence 1134556666666666655543 433 2333 788898875 2357888886656999987654422
Q ss_pred CCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 397 DDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
. ...++++|+|+.. +.++++..+++|+++++
T Consensus 343 ~------------~~~~~~iRis~~~--~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 343 N------------GIGKGYVRIALVY--DTPKLEKALEIIKTYLE 373 (374)
T ss_pred C------------CCCCCeEEEEecC--CHHHHHHHHHHHHHHhh
Confidence 1 1236899999974 68999999999998874
No 152
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.94 E-value=1.6e-24 Score=211.76 Aligned_cols=317 Identities=18% Similarity=0.187 Sum_probs=209.8
Q ss_pred hHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEE
Q 012991 79 RKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSV 158 (452)
Q Consensus 79 ~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v 158 (452)
.....++++.+++++|.+ ++++++|||+|+..++.++ ..++|++|+++.++|.++..++. ..|.++
T Consensus 17 ~~~~~~~~~~la~~~~~~---~~~~~~sgt~al~~~l~~l-------~~~~gd~vl~~~~~~~~~~~~~~----~~g~~~ 82 (352)
T cd00616 17 GPKVREFEKAFAEYLGVK---YAVAVSSGTAALHLALRAL-------GIGPGDEVIVPSFTFVATANAIL----LLGATP 82 (352)
T ss_pred CHHHHHHHHHHHHHhCCC---eEEEECCHHHHHHHHHHHc-------CCCCCCEEEeCCcchHHHHHHHH----HcCCeE
Confidence 346889999999999974 6888999999999999876 24789999999999999877664 459999
Q ss_pred EEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccc
Q 012991 159 VEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKI 237 (452)
Q Consensus 159 ~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~ 237 (452)
+.++++. +...+ ++++++.+ ++++++|++++ ++|...|+++|.++|+++|+ ++|+|++|+.|....
T Consensus 83 ~~~~~~~---~~~~~d~~~l~~~i------~~~~~~v~~~~---~~G~~~~~~~i~~l~~~~~i-~li~D~a~~~g~~~~ 149 (352)
T cd00616 83 VFVDIDP---DTYNIDPELIEAAI------TPRTKAIIPVH---LYGNPADMDAIMAIAKRHGL-PVIEDAAQALGATYK 149 (352)
T ss_pred EEEecCC---CcCCcCHHHHHHhc------CcCCeEEEEEC---CCCCcCCHHHHHHHHHHcCC-eEEEECCCCCCCeEC
Confidence 9996521 13334 78899888 56889998875 58999999999999999999 799999999887643
Q ss_pred ccc-ccCccEEEEcCc--ccCcCCCCcEEEEEec-CccccCCCCCceeccCCCCcc---cccccccccCccccccHHHHH
Q 012991 238 DVK-EIGADFYVSNLH--KWFFCPPSVAFLYCRK-SILSSDMHHPVVSHEFGNGLP---IESAWIGTRDYSAQLVIPSAV 310 (452)
Q Consensus 238 ~~~-~~~~d~~~~s~~--K~l~g~~G~G~l~~~~-~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~al 310 (452)
+.. ....|+.++|++ |++.++.| |+++.++ ++.+. + ..... .+.... ......+... ....+.+++
T Consensus 150 ~~~~~~~~d~~~~S~~~~K~~~~~~g-g~~~~~~~~~~~~-~-~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~aa~ 222 (352)
T cd00616 150 GRKVGTFGDAGAFSFHPTKNLTTGEG-GAVVTNDEELAER-A-RLLRN--HGRDRDRFKYEHEILGYNY--RLSEIQAAI 222 (352)
T ss_pred CEEcccCcceeEEcCCCCCCCcccCc-eEEEECCHHHHHH-H-HHHHH--cCCCCCCCccccceeeecc--CcCHHHHHH
Confidence 211 112577888765 98755554 7777764 44443 1 11100 110000 0000001111 112223333
Q ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcc---cccceEEEEcCCccccCChhhHHHHHHHHhhhcceE
Q 012991 311 TFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPE---ICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVE 387 (452)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~ 387 (452)
...... +++.+.++.+++.+++.+.|.+++++++..+.. ....++.|.+++. .+.+..++.+.|.++ ||.
T Consensus 223 ~~~~l~--~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~v~~~L~~~-gI~ 295 (352)
T cd00616 223 GLAQLE--KLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPE----AGESRDELIEALKEA-GIE 295 (352)
T ss_pred HHHHHH--hhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCc----CCCCHHHHHHHHHHC-CCC
Confidence 332221 567788888999999999999888888765432 2345666766410 145778999999765 998
Q ss_pred eeecccCCCCCCCCCCC--CCCCC------CCccceEEecccccCCHHHHHHHHHHHH
Q 012991 388 VPIHYQAPKDDGQPQAG--ARDKD------GIITGYARISHQVYNTLEDYEKFRDAVI 437 (452)
Q Consensus 388 v~~~~~~~~~~~~~~~~--~~~~~------~~~~~~iRis~~~~~t~~di~~l~~~l~ 437 (452)
++..+.+..... .... ..... ....+.+|++++.++|.+||++++++|+
T Consensus 296 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 296 TRVHYPPLHHQP-PYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred eeeecCccccCH-hhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 765444321100 0000 00000 0113689999999999999999999874
No 153
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.94 E-value=5.7e-25 Score=219.52 Aligned_cols=348 Identities=16% Similarity=0.105 Sum_probs=225.4
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHHh--cCCchhh--hhhhhHHHHH-HHHHHHhHhCCCCCCcEEEecChhHHHH
Q 012991 38 HGVARINNGSFGSCPKSVLADQQKWQLKFL--QQPDDFY--FNSLRKGILE-SRAAVKDLINADDVGEISLVDNATTAAA 112 (452)
Q Consensus 38 ~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~--~~~~~~~--~~~~~~~~~~-~~~~la~~~~~~~~~~i~~t~g~t~a~~ 112 (452)
+..+.|+.+. ++.|+.|.+++...+.... +++++.+ +....+..++ +++.+++++|++ ...|+++ +||+|+.
T Consensus 25 ~~~~~l~~~~-n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~-~~~i~~~-sgt~al~ 101 (416)
T PRK00011 25 EEHIELIASE-NFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAE-YANVQPH-SGSQANA 101 (416)
T ss_pred hcCeeeeccc-CcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCC-ceeeecC-CchHHHH
Confidence 5677887654 4477889999877653221 2222211 1122333444 778999999996 4455554 5688999
Q ss_pred HHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHH-HHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCc
Q 012991 113 IVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAY-VTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKM 190 (452)
Q Consensus 113 ~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~-a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~ 190 (452)
.++.++ +++||+|+++.++|.++...+... ....|.+++.++++ . +.+.+ ++++++.++ ..+
T Consensus 102 ~~l~~l--------~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~-~~~~~d~~~l~~~i~-----~~~ 165 (416)
T PRK00011 102 AVYFAL--------LKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVD--E-ETGLIDYDEVEKLAL-----EHK 165 (416)
T ss_pred HHHHHh--------cCCCCEEEEeccccCCccccccccccccceeeEeecCcC--c-ccCCcCHHHHHHHHH-----hcC
Confidence 988876 589999999999997653222110 12335677776431 1 22345 899999985 247
Q ss_pred eEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCc-----cccccccCccEEEEcCcccCcCCCCcEEEE
Q 012991 191 IRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSI-----KIDVKEIGADFYVSNLHKWFFCPPSVAFLY 265 (452)
Q Consensus 191 ~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~-----~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~ 265 (452)
+++|++++. .+|...|+++|.++|+++|+ ++|+|++|+.|.. +.++. ++|++++|+||++.|+.| |+++
T Consensus 166 ~k~v~~~~~--~~~~~~~~~~I~~la~~~~~-~livD~a~~~g~~~~g~~~~~~~--~~di~~~S~~K~l~g~~g-g~i~ 239 (416)
T PRK00011 166 PKLIIAGAS--AYSRPIDFKRFREIADEVGA-YLMVDMAHIAGLVAAGVHPSPVP--HADVVTTTTHKTLRGPRG-GLIL 239 (416)
T ss_pred CCEEEECCC--cCCCccCHHHHHHHHHHcCC-EEEEECcchhcccccCccCCCCC--CCcEEEecCCcCCCCCCc-eEEE
Confidence 888888654 35677899999999999999 8999999987654 22333 679999999999878886 7777
Q ss_pred Ee-cCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCC
Q 012991 266 CR-KSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGT 344 (452)
Q Consensus 266 ~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~ 344 (452)
++ +++.+. +.... .. ...+++....+.++..++..... .+.+...++.+++++++++.|.+. |+
T Consensus 240 ~~~~~~~~~-l~~~~-~~----------~~~~~~~~~~~aa~~~a~~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~ 304 (416)
T PRK00011 240 TNDEELAKK-INSAV-FP----------GIQGGPLMHVIAAKAVAFKEALE--PEFKEYAQQVVKNAKALAEALAER-GF 304 (416)
T ss_pred eCCHHHHHH-HHHHh-Cc----------cccCCccHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHHHhC-CC
Confidence 75 455543 11110 00 00123333344444444433332 256888899999999999999886 77
Q ss_pred CcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccc--
Q 012991 345 SLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQV-- 422 (452)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~-- 422 (452)
++.. ....++++++.+++ .+.+..++.+.|.+ .||.+..++.+...+. ...++.+|++...
T Consensus 305 ~~~~-~~~~~~~~~i~~~~-----~~~~~~~~~~~L~~-~GI~v~~~~~p~~~~~----------~~~~~~~Ri~~~~~~ 367 (416)
T PRK00011 305 RVVS-GGTDNHLVLVDLRS-----KGLTGKEAEAALEE-ANITVNKNAVPFDPRS----------PFVTSGIRIGTPAIT 367 (416)
T ss_pred eeee-cCCCCeEEEEeCcc-----cCCCHHHHHHHHHH-cCcEEccCcCCCCCCC----------CCCCCceEecCHHHh
Confidence 6543 22225788887742 13356778888865 5999965433211000 1224579997633
Q ss_pred --cCCHHHHHHHHHHHHHHHhc
Q 012991 423 --YNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 423 --~~t~~di~~l~~~l~~~~~~ 442 (452)
..|.+|+++++++|++++..
T Consensus 368 ~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 368 TRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred hcCcCHHHHHHHHHHHHHHHhc
Confidence 34699999999999999876
No 154
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.94 E-value=1.2e-24 Score=213.19 Aligned_cols=362 Identities=14% Similarity=0.103 Sum_probs=239.1
Q ss_pred HHHHhhhccCCCCeEEeccCCCCCCcHHHHHHHHHHHHHHhc--CCch-hhh--hhhhHHHHHHHHHHHhHhCCCCCCcE
Q 012991 27 AEIRDEFSHHQHGVARINNGSFGSCPKSVLADQQKWQLKFLQ--QPDD-FYF--NSLRKGILESRAAVKDLINADDVGEI 101 (452)
Q Consensus 27 ~~ir~~~~~~~~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~--~~~~-~~~--~~~~~~~~~~~~~la~~~~~~~~~~i 101 (452)
+.|++|... ++..+.|- ++-...++.|++++...+..-+. .|.. +|. ...+++...+.++..++||++ ..-
T Consensus 39 ~~~~~e~~r-q~~~l~Li-asEN~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~--~an 114 (493)
T PRK13580 39 EAIRQELAD-QRSSLKLI-ASENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAE--HAY 114 (493)
T ss_pred HHHHHHHHH-HhcCceEe-cccccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCC--ccc
Confidence 445555543 35566665 44567777799998777665332 2222 222 344667777899999999996 333
Q ss_pred EEecChhHHHHHHHHHhhccc----------------------ccCC-CCCCCEEEEeCCcchhHHHHHHHHHHhcC--c
Q 012991 102 SLVDNATTAAAIVLQQIGRGF----------------------TEGR-FHRNDTVLMLHCAFQAVKKSIQAYVTRAG--G 156 (452)
Q Consensus 102 ~~t~g~t~a~~~~~~~l~~~~----------------------~~~~-~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g--~ 156 (452)
+-.-||+.|+..++.++.... ...+ .-.||+|+..+..+.++...- ......| .
T Consensus 115 vqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg-~~~n~~~~~~ 193 (493)
T PRK13580 115 VQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHG-FRPNISGKMF 193 (493)
T ss_pred ccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecC-cccchhhhee
Confidence 556678889999999884210 0000 001789997755443321100 0011123 3
Q ss_pred EEEEEeCCCCCC-ChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCC
Q 012991 157 SVVEVQLPFPLA-SEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGS 234 (452)
Q Consensus 157 ~v~~~~~~~~~~-~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~ 234 (452)
+++.. +.+ +.+.+ ++++++.+ .++++.|++++.+|. |...|+++|.++|++||+ ++++|++|++|.
T Consensus 194 ~~~~y----~vd~~~g~iD~d~l~~~~------~~~~plvii~g~S~~-~~~~dl~~i~eia~~~gA-~L~VD~AH~~Gl 261 (493)
T PRK13580 194 HQRSY----GVDPDTGLLDYDEIAALA------REFKPLILVAGYSAY-PRRVNFAKLREIADEVGA-VLMVDMAHFAGL 261 (493)
T ss_pred eeEec----ccCcccCccCHHHHHHHH------hhcCCEEEEeCcccc-CCCcCHHHHHHHHHHcCC-EEEEECchhhce
Confidence 33334 333 33556 99999999 466778888888887 558899999999999999 899999999998
Q ss_pred cccccc------ccCccEEEEcCcccCcCCCCcEEEEEecCccccCCC--CCceeccCCCCcccccccccccCccccccH
Q 012991 235 IKIDVK------EIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMH--HPVVSHEFGNGLPIESAWIGTRDYSAQLVI 306 (452)
Q Consensus 235 ~~~~~~------~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (452)
++.+.. ..++|++++|+||+++||.| |++++++++++. +. .|+ ..|++....+.+.
T Consensus 262 igg~~~~~~~~~~~~~D~vtgT~hKaL~GP~G-G~I~~~~~l~~~-L~~a~P~--------------i~gg~l~p~iAA~ 325 (493)
T PRK13580 262 VAGKVFTGDEDPVPHADIVTTTTHKTLRGPRG-GLVLAKKEYADA-VDKGCPL--------------VLGGPLPHVMAAK 325 (493)
T ss_pred eccccchhhcCCCCCCcEEEeCChhhccCCCe-EEEEecHHHHHH-HhhCCCc--------------ccCCCccHHHHHH
Confidence 864431 12689999999999889997 999999887765 21 111 1134444455555
Q ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcce
Q 012991 307 PSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGV 386 (452)
Q Consensus 307 ~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI 386 (452)
..++..+.+. +++.+++++.+++++|.+.|.+. |+.+.... ..++++.+.+.+ .+.+...+.+.|.+ .||
T Consensus 326 avAl~e~~~~--ef~~y~~~l~~Na~~La~~L~~~-G~~vv~gg-TdshIV~V~lg~-----~~~~g~~a~~~L~e-~GI 395 (493)
T PRK13580 326 AVALAEARTP--EFQKYAQQVVDNARALAEGFLKR-GARLVTGG-TDNHLVLIDVTS-----FGLTGRQAESALLD-AGI 395 (493)
T ss_pred HHHHHHHhCc--cHHHHHHHHHHHHHHHHHHHHhc-CCCccCCC-CCCCEEEEEeCC-----HHHHHHHHHHHHHH-CCe
Confidence 5566655532 45778999999999999999887 88775322 226788887752 12234567778866 599
Q ss_pred EeeecccCCCC-CCCCCCCCCCCCCCccceEEecccccC----CHHHHHHHHHHHHHHHhc
Q 012991 387 EVPIHYQAPKD-DGQPQAGARDKDGIITGYARISHQVYN----TLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 387 ~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~iRis~~~~~----t~~di~~l~~~l~~~~~~ 442 (452)
.+.....|... | ......|||++...+ +++|++++++.|.++++.
T Consensus 396 ~vn~i~~Ptvp~g-----------~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~ 445 (493)
T PRK13580 396 VTNRNSIPSDPNG-----------AWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSN 445 (493)
T ss_pred EEccccCCCCCCC-----------CCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHh
Confidence 99654444221 0 112568999998744 589999999999998864
No 155
>PRK03321 putative aminotransferase; Provisional
Probab=99.94 E-value=7.1e-25 Score=214.02 Aligned_cols=315 Identities=15% Similarity=0.142 Sum_probs=216.7
Q ss_pred CeEEeccCCCCC-CcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHH
Q 012991 39 GVARINNGSFGS-CPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQ 117 (452)
Q Consensus 39 ~~~~l~~~~~~~-~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~ 117 (452)
.+++|+.+.++. .|+.+.+++.+.......++ ..+..++|+.++++++++ +++|++|+|+++++..++.+
T Consensus 23 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~--------~~g~~~lr~~ia~~~~~~-~~~I~~~~G~~~~l~~~~~~ 93 (352)
T PRK03321 23 GAIKLSSNETPFGPLPSVRAAIARAAAGVNRYP--------DMGAVELRAALAEHLGVP-PEHVAVGCGSVALCQQLVQA 93 (352)
T ss_pred cceeccCCCCCCCCCHHHHHHHHHHHHhcCcCC--------CCcHHHHHHHHHHHhCcC-HHHEEECCCHHHHHHHHHHH
Confidence 578888886653 56679999987765332221 345789999999999985 78999999999999988876
Q ss_pred hhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEE
Q 012991 118 IGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAII 196 (452)
Q Consensus 118 l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~ 196 (452)
+ +++||+|+++.+.|...... ++..|.+++.+++ +.++.+ ++++++.+ .+++++|++
T Consensus 94 ~--------~~~gd~Vli~~p~y~~~~~~----~~~~g~~~~~v~~----~~~~~~~~~~l~~~~------~~~~~~v~l 151 (352)
T PRK03321 94 T--------AGPGDEVIFAWRSFEAYPIL----VQVAGATPVQVPL----TPDHTHDLDAMAAAI------TDRTRLIFV 151 (352)
T ss_pred h--------cCCCCEEEeCCCCHHHHHHH----HHHcCCEEEEccC----CCCCCCCHHHHHHhh------ccCCCEEEE
Confidence 5 58999999999998764333 4557999998854 322334 88898888 468899999
Q ss_pred eccCCCCcccccHHHHHHHHHH--cCCCEEEEecccccCCc------cccc-cccCccEEEEcCcccCcCCCC--cEEEE
Q 012991 197 DHITSMPCVVIPVRKLVKICRD--EGVDQVFVDAAHAMGSI------KIDV-KEIGADFYVSNLHKWFFCPPS--VAFLY 265 (452)
Q Consensus 197 ~~~~n~tG~~~~l~~i~~l~~~--~~~~~~ivD~a~~~g~~------~~~~-~~~~~d~~~~s~~K~l~g~~G--~G~l~ 265 (452)
++++||||.++|.++|.++|++ +++ ++|+|+++..... .+.. ...+-.+++.|++|. +|.+| +|+++
T Consensus 152 ~~p~NPtG~~~~~~~l~~l~~~~~~~~-~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~-~g~~GlRiG~~v 229 (352)
T PRK03321 152 CNPNNPTGTVVTPAELARFLDAVPADV-LVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKA-YGLAGLRVGYAV 229 (352)
T ss_pred eCCCCCcCCCcCHHHHHHHHHhCCCCe-EEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHH-hhhHHHhhhhhc
Confidence 9999999999999999999987 589 7999999753221 1111 111224667799996 66666 89999
Q ss_pred EecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 012991 266 CRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS 345 (452)
Q Consensus 266 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~ 345 (452)
+++++++. + .... ...+.+...+.++.+++..... .....++..+.++.+.+.|.+. ++.
T Consensus 230 ~~~~~~~~-~-~~~~-------------~~~~~s~~~q~~a~~~l~~~~~----~~~~~~~~~~~r~~~~~~L~~~-~~~ 289 (352)
T PRK03321 230 GHPEVIAA-L-RKVA-------------VPFSVNSLAQAAAIASLAAEDE----LLERVDAVVAERDRVRAALRAA-GWT 289 (352)
T ss_pred CCHHHHHH-H-HHhc-------------CCCCCCHHHHHHHHHHhcCHHH----HHHHHHHHHHHHHHHHHHHHHC-CCc
Confidence 88777765 2 1110 0012233333333333322121 2223334445566788888775 655
Q ss_pred cCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCC
Q 012991 346 LGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNT 425 (452)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t 425 (452)
+.. +. ++++|+.++ .+..++.+.|.+ +||.+... ..++|||+++ +
T Consensus 290 ~~~-~~--g~~i~i~l~--------~~~~~~~~~l~~-~gI~v~~~--------------------~~~~iRi~~~---~ 334 (352)
T PRK03321 290 VPP-SQ--ANFVWLPLG--------ERTADFAAAAAE-AGVVVRPF--------------------AGEGVRVTIG---A 334 (352)
T ss_pred cCC-CC--CCEEEEeCC--------CCHHHHHHHHHH-CCEEEEcc--------------------CCCcEEEeeC---C
Confidence 432 22 678888774 245688899865 69998641 1246999986 8
Q ss_pred HHHHHHHHHHHHHHHh
Q 012991 426 LEDYEKFRDAVILLVE 441 (452)
Q Consensus 426 ~~di~~l~~~l~~~~~ 441 (452)
.+++++++++|++++.
T Consensus 335 ~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 335 PEENDAFLRAARAWRA 350 (352)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999998753
No 156
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.94 E-value=1.2e-24 Score=214.93 Aligned_cols=323 Identities=18% Similarity=0.172 Sum_probs=233.8
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHH
Q 012991 38 HGVARINNGSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQ 117 (452)
Q Consensus 38 ~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~ 117 (452)
++..+.........+....+.+...+.....++..+ .......+++-..++++++.++...-.||+|||+|+.+++.+
T Consensus 61 ~p~~~~~~~~~~~~~~~a~~~~~~~~~~nl~d~~~~--p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~a 138 (460)
T COG0076 61 HPRANLAGFCPTRVPPVAAELLVSALNKNLGDPDES--PAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLA 138 (460)
T ss_pred CcceEEEccCCCCCHHHHHHHHHHHHhhcCCCcccC--hhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHH
Confidence 445555555566677777888877776554444443 356778899999999999997455679999999999999998
Q ss_pred hhcccccCCCC-----C-CCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCc
Q 012991 118 IGRGFTEGRFH-----R-NDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKM 190 (452)
Q Consensus 118 l~~~~~~~~~~-----~-g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~ 190 (452)
..+.+.+.... . ..+|+++...|.|+.++...+ |++.+.+++. + . +..+ +++++++|+ ++
T Consensus 139 ar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~l----G~~~~~v~~~-~-~-~~~id~~~l~~~i~------~~ 205 (460)
T COG0076 139 ARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARYL----GLGLRRVPTV-P-T-DYRIDVDALEEAID------EN 205 (460)
T ss_pred HHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHHHh----CCCceeEEec-c-C-ccccCHHHHHHHHH------hh
Confidence 86655311111 1 127999999999988887665 9999999653 1 1 5566 999999995 44
Q ss_pred eEE--EEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccc-------cccccCccEEEEcCcccCcCCCCc
Q 012991 191 IRL--AIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKI-------DVKEIGADFYVSNLHKWFFCPPSV 261 (452)
Q Consensus 191 ~~l--v~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~-------~~~~~~~d~~~~s~~K~l~g~~G~ 261 (452)
+.. |+.+.+++++|.+.|+++|+++|+++++ ++|||+|.+....++ ++..-++|.++.++|||++.|.|+
T Consensus 206 t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i-~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~ 284 (460)
T COG0076 206 TIGGVVVGTAGTTDTGSIDDIEELADIAEEYGI-WLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGC 284 (460)
T ss_pred ccCceEEEEecCCCCCccCCHHHHHHHHHHcCC-cEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCCc
Confidence 444 9999999999999999999999999999 599999988766543 333337899999999999999999
Q ss_pred EEEEEecC-ccccCCCCCceeccCCCC-cccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHH
Q 012991 262 AFLYCRKS-ILSSDMHHPVVSHEFGNG-LPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLA 339 (452)
Q Consensus 262 G~l~~~~~-~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~ 339 (452)
|+++.+++ .+...+. +...|..+ ...+....++.+....+++...+..+.. +|+.++.++..++++++.+.|.
T Consensus 285 G~il~rd~e~l~~~~~---~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~--eGy~~l~~~~~~~a~~la~~l~ 359 (460)
T COG0076 285 GVVLFRDEEALRRILI---FADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGR--EGYRKLLDRTLELARYLAEELE 359 (460)
T ss_pred eEEEEECHHHhhhhhh---cccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCH--hHHHHHHHHHHHHHHHHHHHHH
Confidence 99999987 3433111 11112211 2223333456666566666666776653 3899999999999999999999
Q ss_pred HHcCCCcCCCcccccceEEEEcCCccccCChhh-HHHHHHHHhhhcceEeee
Q 012991 340 NAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDD-ALRLRGHLRVRFGVEVPI 390 (452)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~L~~~~gI~v~~ 390 (452)
+.+.+++.+++. .++++|+.++ ..+ ..+..+.+.+ .|..++.
T Consensus 360 ~~~~~e~~~~p~--l~~V~fr~~~------~~~~~~~~~~~~~~-~gw~v~~ 402 (460)
T COG0076 360 KLGDFELVNEPE--LPIVAFRLKD------DEDTLADLSERLDR-RGWQVPA 402 (460)
T ss_pred hCCCcEeecCCc--cceEEEEcCC------cccchhchHHHHHh-cCceeec
Confidence 986689888775 8899999863 222 3455566654 4887753
No 157
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=1.1e-24 Score=213.92 Aligned_cols=321 Identities=14% Similarity=0.093 Sum_probs=216.7
Q ss_pred CeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh------CCCCCCcEEEecChhHHH
Q 012991 39 GVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI------NADDVGEISLVDNATTAA 111 (452)
Q Consensus 39 ~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~~i~~t~g~t~a~ 111 (452)
..+.|+.+... +.|+.+.+++.+.+..... ....|. .....++|+++++++ +++ +++|++|+|+++++
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~~~---~~~~Y~-~~g~~~lr~aia~~~~~~~~~~~~-~~~I~it~G~~~~l 101 (368)
T PRK03317 27 VPVRLNTNENPYPPSPALVADIAEAVAEAAA---GLNRYP-DRDAVALRADLAAYLTAQTGVGLT-VENVWAANGSNEIL 101 (368)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhhhh---hhccCC-CCchHHHHHHHHHHhhhhccCCCC-hhhEEECCCHHHHH
Confidence 35778776654 5777799999887643211 111121 234677888888888 343 78999999999999
Q ss_pred HHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCc
Q 012991 112 AIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKM 190 (452)
Q Consensus 112 ~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~ 190 (452)
.+++.++ +++||.|+++.|.|..+...+ ...|.++..++. +++..+ ++.++++++ .++
T Consensus 102 ~~~~~~~--------~~~gd~v~v~~P~y~~~~~~~----~~~g~~~~~~~~----~~~~~~d~~~l~~~~~-----~~~ 160 (368)
T PRK03317 102 QQLLQAF--------GGPGRTALGFVPSYSMHPIIA----RGTHTEWVEGPR----AADFTLDVDAAVAAIA-----EHR 160 (368)
T ss_pred HHHHHHh--------cCCCCEEEEeCCChHHHHHHH----HhcCCeeEEccc----CCCCCCCHHHHHHHHh-----ccC
Confidence 9999987 589999999999998765443 456888877743 333334 889998885 257
Q ss_pred eEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCc---c--ccc-cccCccEEEEcCcccCcCCCC--cE
Q 012991 191 IRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSI---K--IDV-KEIGADFYVSNLHKWFFCPPS--VA 262 (452)
Q Consensus 191 ~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~---~--~~~-~~~~~d~~~~s~~K~l~g~~G--~G 262 (452)
+++|++++|+||||.+++.+++.++++.+++ ++|+|++++.... + ... ...+-.+++.|++|. +|.+| +|
T Consensus 161 ~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~-~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~-~g~~GlRiG 238 (368)
T PRK03317 161 PDVVFLTSPNNPTGTALPLDDVEAILDAAPG-IVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKA-FAFAGGRLG 238 (368)
T ss_pred CCEEEEeCCCCCCCCCCCHHHHHHHHHHCCc-eEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhh-hccchhhhh
Confidence 8899999999999999999999999999999 7999999874211 1 111 111223567799996 55555 79
Q ss_pred EEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHc
Q 012991 263 FLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAW 342 (452)
Q Consensus 263 ~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~ 342 (452)
+++++++++.. +. ... . ....+...+.+..++++... .+...++++.+.++.+.+.|.+.
T Consensus 239 ~~~~~~~~~~~-l~-~~~-----------~--~~~~s~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~- 298 (368)
T PRK03317 239 YLAAAPAVVDA-LR-LVR-----------L--PYHLSAVTQAAARAALRHAD----ELLASVAALRAERDRVVAWLREL- 298 (368)
T ss_pred hhhCCHHHHHH-HH-hcC-----------C--CCCCCHHHHHHHHHHhhCHH----HHHHHHHHHHHHHHHHHHHHHHC-
Confidence 99888877765 21 110 0 01122223333334443322 23334455677777888888775
Q ss_pred CCCcCCCcccccceEEE-EcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEeccc
Q 012991 343 GTSLGSPPEICAAMVMV-GLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQ 421 (452)
Q Consensus 343 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~ 421 (452)
++.+..+. ++++++ .++ +...+.+.|.+ +||.+... ..++++|++++
T Consensus 299 g~~~~~~~---~~~~~~~~~~---------~~~~~~~~l~~-~Gv~v~~~-------------------~~~~~iRi~~~ 346 (368)
T PRK03317 299 GLRVAPSD---ANFVLFGRFA---------DRHAVWQGLLD-RGVLIRDV-------------------GIPGWLRVTIG 346 (368)
T ss_pred CCEeCCCC---CcEEEEeccC---------CHHHHHHHHHH-CCEEEEeC-------------------CCCCeEEEecC
Confidence 66655443 334433 332 45678888876 59998632 12469999987
Q ss_pred ccCCHHHHHHHHHHHHHHHhc
Q 012991 422 VYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 422 ~~~t~~di~~l~~~l~~~~~~ 442 (452)
+.+++++++++|+++++.
T Consensus 347 ---~~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 347 ---TPEENDAFLAALAEVLAT 364 (368)
T ss_pred ---CHHHHHHHHHHHHHHHHH
Confidence 788999999999998753
No 158
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.94 E-value=2.5e-24 Score=214.66 Aligned_cols=385 Identities=14% Similarity=0.117 Sum_probs=247.9
Q ss_pred cccccCCCCCCCCCHHHHHhhhccCCCCeEEeccCCC--CC-CcH---HHHHHHHHHHHHHhcCCchhhhhhhhHHHHHH
Q 012991 12 HHVSKKPKLTRCISEAEIRDEFSHHQHGVARINNGSF--GS-CPK---SVLADQQKWQLKFLQQPDDFYFNSLRKGILES 85 (452)
Q Consensus 12 ~~~~~~~~~~~~~~~~~ir~~~~~~~~~~~~l~~~~~--~~-~p~---~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (452)
+++.|+-.|+..++.++..+.....+.+++.|..+.+ .. +|. .+.+++.+.+.. +.. .|.....+.++
T Consensus 10 ~~r~~~v~~~~~~~~~~~~~~l~~~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~----g~~--~Y~~~~g~~~L 83 (460)
T PRK13238 10 PFRIKMVEPIRLTTREERERALAEAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMR----GDE--AYAGSRSYYRL 83 (460)
T ss_pred ceeeceeccccccCHHHHHHHHHHcCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHh----CCc--ccCCCCCHHHH
Confidence 3456666677778888877777767889999999887 33 322 355555555431 222 24445668999
Q ss_pred HHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCC
Q 012991 86 RAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPF 165 (452)
Q Consensus 86 ~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~ 165 (452)
+++++++++.+ .+++|+|||+|+.+++.++ +++|| |+++++.|.+....+ ...|.+++.++++.
T Consensus 84 reaia~~~~~~---~vv~t~ggt~A~~~~~~al--------l~pGD-Vii~~p~~~~~~~~i----~~~G~~~v~v~~~~ 147 (460)
T PRK13238 84 EDAVKDIFGYP---YTIPTHQGRAAEQILFPVL--------IKKGD-VVPSNYHFDTTRAHI----ELNGATAVDLVIDE 147 (460)
T ss_pred HHHHHHHhCCC---cEEECCCHHHHHHHHHHHh--------CCCCC-EEccCCcccchHHHH----HHcCCEEEEEeccc
Confidence 99999999884 7899999999999999876 68999 888888777654333 44699999997632
Q ss_pred CC-----CC-hHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCc-cccc---HHHHHHHHHHcCCCEEEEecccccC-
Q 012991 166 PL-----AS-EEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPC-VVIP---VRKLVKICRDEGVDQVFVDAAHAMG- 233 (452)
Q Consensus 166 ~~-----~~-~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG-~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g- 233 (452)
.. +. .+.+ +++|++.++... .+++++|++++++|++| .+++ +++|.++|++||+ ++|+|+++...
T Consensus 148 ~~~~~~~~~f~g~id~e~Le~~i~~~~--~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi-~li~Daa~~~e~ 224 (460)
T PRK13238 148 ALDTGSRHPFKGNFDLEKLEALIEEVG--AENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGI-PVVIDAARFAEN 224 (460)
T ss_pred cccccccccccCCcCHHHHHHHHhhcC--CCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCC-EEEEECcchhhh
Confidence 10 11 1235 899999995320 14799999999999998 7776 5689999999999 79999988542
Q ss_pred ----------Cccccccc------cCccEEEEcCcccCcCCCCcEEEEEec-CccccCCCCCceeccCCCCccccccccc
Q 012991 234 ----------SIKIDVKE------IGADFYVSNLHKWFFCPPSVAFLYCRK-SILSSDMHHPVVSHEFGNGLPIESAWIG 296 (452)
Q Consensus 234 ----------~~~~~~~~------~~~d~~~~s~~K~l~g~~G~G~l~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 296 (452)
....++.. -..|++++|++|.++++.| |+++.++ ++... + ........| ....+
T Consensus 225 a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~G-G~i~~~d~~l~~~-~-~~~~~~~~g------~~t~~ 295 (460)
T PRK13238 225 AYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIG-GLLCFRDEDLFTE-C-RTLCILYEG------FPTYG 295 (460)
T ss_pred hhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcce-eEEEcChHHHHHH-h-hhcccccCC------ccccc
Confidence 11222211 1379999999998788887 8888884 55554 2 111100000 00112
Q ss_pred ccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccc--cCChhhHH
Q 012991 297 TRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLR--VMGEDDAL 374 (452)
Q Consensus 297 ~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 374 (452)
..+...+.++..+++.... +...+...+.+++|.+.|.+. |+.+..|.+ ++++++.+..... ...+....
T Consensus 296 g~~~~~~~Ala~~l~e~~~-----~~~~~~~~~~~~~l~~~L~~~-G~~~~~p~G--g~~v~~d~~~~~~~~~~~~~~~~ 367 (460)
T PRK13238 296 GLAGRDMEALAVGLYEGMD-----EDYLAYRIGQVEYLGEGLEEA-GVPIQTPAG--GHAVFVDAGKFLPHIPAEQFPAQ 367 (460)
T ss_pred CcHHHHHHHHHhhHHHhhC-----hHHHHHHHHHHHHHHHHHHHC-CCCeEccCC--ceEEEEEchhcCCCCCCCCCchH
Confidence 2222233444444433221 122333344678999999886 898887766 5666666532100 01123457
Q ss_pred HHHHHHhhhcceEeeecc-cCCCCCCCCCCCCCCCCCCccceEEecccc-cCCHHHHHHHHHHHHHHHhc
Q 012991 375 RLRGHLRVRFGVEVPIHY-QAPKDDGQPQAGARDKDGIITGYARISHQV-YNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 375 ~l~~~L~~~~gI~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~t~~di~~l~~~l~~~~~~ 442 (452)
+++.+|.++.||.+..+. .....+ ...... .......+|++++- .-|.++++.+.++|+++.+.
T Consensus 368 ~~a~~L~~e~GV~~~~~~~f~~~~~--~~~~~~--~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~ 433 (460)
T PRK13238 368 ALACELYLEAGIRGVEIGSLLLGRD--PKTGEQ--LPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKEN 433 (460)
T ss_pred HHHHHHHHHcCeeeecccceecccC--CCCccc--cCCccceEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence 789888888899984322 211110 000000 01235799999973 23889999999999999864
No 159
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=3.1e-24 Score=210.93 Aligned_cols=325 Identities=15% Similarity=0.138 Sum_probs=213.8
Q ss_pred CeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhC--------CCCCCcEEEecChhH
Q 012991 39 GVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLIN--------ADDVGEISLVDNATT 109 (452)
Q Consensus 39 ~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--------~~~~~~i~~t~g~t~ 109 (452)
.++.|+.+.+. ++|+.+.+++.+.+.... .... | ...+..++|++++++++ ++ +++|++|+|+++
T Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--Y-~~~G~~~Lr~aia~~~~~~~~~~~~v~-~~~I~it~Ga~~ 102 (374)
T PRK02610 29 QLDRLDTNEFPYDLPPDLKQKLAWLYQQGI--ESNR--Y-PDGGHEALKQAIAEYVNESAAGSSQIT-PANISVGNGSDE 102 (374)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhcc--cccC--C-CCCchHHHHHHHHHHhCccccccCCCC-HHHEEEcCChHH
Confidence 46778877766 567778898887654310 0111 2 12457889999999987 54 789999999999
Q ss_pred HHHHHHHHhhcccccCCCCCCC-EEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccC
Q 012991 110 AAAIVLQQIGRGFTEGRFHRND-TVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKD 187 (452)
Q Consensus 110 a~~~~~~~l~~~~~~~~~~~g~-~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~ 187 (452)
++..++.++ +.+|+ +|++++|.|......+ +..|.+++.++++ .+...+ +++|++++++..
T Consensus 103 al~~~~~~~--------~~~g~~~Vlv~~P~y~~~~~~~----~~~g~~~~~~~~~---~~~~~~d~~~l~~~~~~~~-- 165 (374)
T PRK02610 103 LIRSLLIAT--------CLGGEGSILVAEPTFSMYGILA----QTLGIPVVRVGRD---PETFEIDLAAAQSAIEQTQ-- 165 (374)
T ss_pred HHHHHHHHH--------cCCCCCeEEEcCCChHHHHHHH----HHcCCEEEEecCC---cccCCCCHHHHHHHHHhhc--
Confidence 998877765 35664 8999999998765554 5569999998542 111234 888988885210
Q ss_pred CCceEEEEEeccCCCCcccccHHHHHHHHH-HcCCCEEEEecccccCCcc--c-cccccCccEEEEcCcccCcCCCC--c
Q 012991 188 GKMIRLAIIDHITSMPCVVIPVRKLVKICR-DEGVDQVFVDAAHAMGSIK--I-DVKEIGADFYVSNLHKWFFCPPS--V 261 (452)
Q Consensus 188 ~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~-~~~~~~~ivD~a~~~g~~~--~-~~~~~~~d~~~~s~~K~l~g~~G--~ 261 (452)
.+++++|++++|+||||.+++.+++.++.+ .+++ ++|+|+++...... . .+....--+++.|++|. +|.+| +
T Consensus 166 ~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~-~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~-~g~~GlRi 243 (374)
T PRK02610 166 NPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDI-LVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKA-FRLAAHRV 243 (374)
T ss_pred CCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCc-EEEEeccccccCccchHHHHhcCCCEEEEEecchh-ccCcccce
Confidence 158999999999999999999877766553 2489 79999998532111 1 11111223677899996 66666 8
Q ss_pred EEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHH
Q 012991 262 AFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANA 341 (452)
Q Consensus 262 G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 341 (452)
|+++.++++++. + .... . ....+...+.+...+++....+ .+.+++ ..+.++.+.+.|.++
T Consensus 244 G~~v~~~~l~~~-l-~~~~---~----------~~~~~~~~q~a~~~~l~~~~~~---~~~~~~-~~~~r~~l~~~L~~~ 304 (374)
T PRK02610 244 GYAIGHPELIAV-L-EKVR---L----------PYNLPSFSQLAAQLALEHRQEL---LAAIPE-ILQERDRLYQALQEL 304 (374)
T ss_pred eeeecCHHHHHH-H-HHhc---C----------CCCCCHHHHHHHHHHhcCHHHH---HHHHHH-HHHHHHHHHHHHHhC
Confidence 999888777765 1 1110 0 0112223333333343322221 233333 344466777888776
Q ss_pred cCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEeccc
Q 012991 342 WGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQ 421 (452)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~ 421 (452)
+++.+. |++ ++++|+.++ .+.+..++.+.|.+ +||.++. ..+++|||++
T Consensus 305 ~~~~~~-p~~--g~f~~~~l~------~~~~~~~~~~~l~~-~gi~v~~---------------------~~~~lRls~~ 353 (374)
T PRK02610 305 PQLRVW-PSA--ANFLYLRLS------QDAALAALHQALKA-QGTLVRH---------------------TGGGLRITIG 353 (374)
T ss_pred CCcEeC-CCc--ceEEEEeCC------CCCCHHHHHHHHHH-CCEEEEe---------------------CCCeEEEeCC
Confidence 666543 433 778999887 34567788888865 5999852 1368999987
Q ss_pred ccCCHHHHHHHHHHHHHHHh
Q 012991 422 VYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 422 ~~~t~~di~~l~~~l~~~~~ 441 (452)
+.+++++++++|++++.
T Consensus 354 ---~~~~~~~~l~~l~~~l~ 370 (374)
T PRK02610 354 ---TPEENQRTLERLQAALT 370 (374)
T ss_pred ---CHHHHHHHHHHHHHHHh
Confidence 56789999999988764
No 160
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.94 E-value=2.4e-24 Score=205.54 Aligned_cols=345 Identities=10% Similarity=0.072 Sum_probs=244.0
Q ss_pred eEEeccCCCCCCcHHHHHHHHHHHHHHhcCC-----chhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEe-cChhHHHHH
Q 012991 40 VARINNGSFGSCPKSVLADQQKWQLKFLQQP-----DDFYFNSLRKGILESRAAVKDLINADDVGEISLV-DNATTAAAI 113 (452)
Q Consensus 40 ~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t-~g~t~a~~~ 113 (452)
.++|. +++...|++|++.+++-+.++...+ .++.+..+.++++++++.+.++++.|+..+|+|. .|||.++..
T Consensus 5 ~~nF~-aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea 83 (364)
T PRK12462 5 QLNFS-GGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSM 83 (364)
T ss_pred cceec-CCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHH
Confidence 45666 4467778789999988777664432 2345678899999999999999999744566655 569999999
Q ss_pred HHHHhhcccccCCCCCCCEEE-EeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH--HHHHHHHHhccccCCCc
Q 012991 114 VLQQIGRGFTEGRFHRNDTVL-MLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI--INEFKKGIEKGKKDGKM 190 (452)
Q Consensus 114 ~~~~l~~~~~~~~~~~g~~Vl-~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~--~~~l~~~i~~~~~~~~~ 190 (452)
+..++ +.+|++++ +....+.| .-|...|++.| .+..+...++ .+.+.+ .+++ .+ .++
T Consensus 84 ~~~Nl--------l~~g~~~~~~~~tG~fg--~r~~~ea~~~g-~v~~~~~~~~-~~~~~~p~~~~~--~~------~~d 143 (364)
T PRK12462 84 IPMNF--------SRPGAAAPEYVTTGYWS--RKAIGEASRVA-AMRVVWDGAA-SGYRTLPSLAEL--DW------DAR 143 (364)
T ss_pred HHHHc--------CCCCCcEEEEEeCCHHH--HHHHHHHHhcC-CceEecCcCC-CCCCcCCCHHHh--cc------CCC
Confidence 99987 57888655 44344333 23344477777 5555421111 111222 3333 12 456
Q ss_pred eEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCc
Q 012991 191 IRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSI 270 (452)
Q Consensus 191 ~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~ 270 (452)
.+.|.+++.+|.+|+.+| ++.+.+++ ++++|++++++..++|++++ |++.++.+|.| ||+|++++++++++
T Consensus 144 ~~~v~~t~NETstGv~~~-----~~~~~~~~-llvvD~sS~~~s~pid~~~~--dvi~agsQKnl-gP~Gltvvivs~~a 214 (364)
T PRK12462 144 APFRHYVSNETVEGLQFP-----DAAGLPDS-PLIADMSSDFMSRPFDVEAY--GMVYAHAQKNL-GPAGVTVAIIRRAL 214 (364)
T ss_pred CcEEEEccCCCCceEecC-----cccccCCC-eEEEEcCchhhCCCCChHHc--cEEEeeccccC-CCCceEEEEECHHH
Confidence 788999999999999997 33334689 89999999999999999977 99999999986 59999999999999
Q ss_pred cccCCCCCceeccCCCCc-ccccccccccCccccccHHHHHHHHHHhh-cCHHHHHHHHHHHHHHHHHHHHHHcCCC-c-
Q 012991 271 LSSDMHHPVVSHEFGNGL-PIESAWIGTRDYSAQLVIPSAVTFVSRFE-GGIDGIMQRNHEQALKMARMLANAWGTS-L- 346 (452)
Q Consensus 271 ~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~al~~~~~~~-~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~- 346 (452)
+++ . .......+.... ..+.....||+...++++..+++|+.+ + +|++++.++.+++++.+++.+.+..++. .
T Consensus 215 l~~-~-~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~-e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~ 291 (364)
T PRK12462 215 LER-V-PDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRD-EIGGVHAMRDINARKAAMLYATLDALNEVIDCH 291 (364)
T ss_pred Hhh-c-cccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHH-hccCHHHHHHHHHHHHHHHHHHHHhCCCcccCC
Confidence 876 1 111100000000 001123459999999999999999986 4 5999999999999999999999986553 2
Q ss_pred CCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCH
Q 012991 347 GSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTL 426 (452)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~ 426 (452)
..+......-+.|.++ +.....++.+...+ .|+..-.+|.. .|.+|+|+....+.
T Consensus 292 ~~~~~RS~mnv~f~~~------~~~l~~~f~~~a~~-~gl~~lkGhr~------------------vgg~Ras~yna~~~ 346 (364)
T PRK12462 292 AHRAARSTMNVAFRFR------QPRLDTLFKEQSTE-AGFCGLSGHRS------------------IGGIRASLYNAVSE 346 (364)
T ss_pred CChhhcCcceEEEEcC------CHHHHHHHHHHHHH-CCCccccCCcc------------------cCceEEEcCCCCCH
Confidence 2222232344667775 23334567777755 49987656553 35699999988999
Q ss_pred HHHHHHHHHHHHHHhc
Q 012991 427 EDYEKFRDAVILLVEE 442 (452)
Q Consensus 427 ~di~~l~~~l~~~~~~ 442 (452)
+++++|++.|++..++
T Consensus 347 e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 347 QAVSRLCAFLKDFAIR 362 (364)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998754
No 161
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.94 E-value=1.1e-23 Score=206.27 Aligned_cols=341 Identities=12% Similarity=0.103 Sum_probs=235.3
Q ss_pred CCeEEeccCCCC--CCcHHHHHHHHHHHHHHhcCCch-hhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHH
Q 012991 38 HGVARINNGSFG--SCPKSVLADQQKWQLKFLQQPDD-FYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIV 114 (452)
Q Consensus 38 ~~~~~l~~~~~~--~~p~~v~e~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~ 114 (452)
+.+++|..+.+- ...+.+.++..+.+..+...... ....+.....+++++.+|+++|.+ ..++.++|..|+..+
T Consensus 102 r~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e---~all~sSGy~AN~~~ 178 (476)
T PLN02955 102 KKLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKKE---DCLVCPTGFAANMAA 178 (476)
T ss_pred ceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCCC---cEEEECChHHHHHHH
Confidence 356777666543 34455888888888776433222 122445567789999999999985 667777788888888
Q ss_pred HHHhhccc------ccCCCCCCCEEEEeCCcchhHHHHHHHHHHhc-CcEEEEEeCCCCCCChHHHHHHHHHHHhccccC
Q 012991 115 LQQIGRGF------TEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRA-GGSVVEVQLPFPLASEEEIINEFKKGIEKGKKD 187 (452)
Q Consensus 115 ~~~l~~~~------~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~ 187 (452)
+.+++... ......+++.|+++...|.|+..+.+. ++.. +.++..+ +.++ .+.|++.+++.
T Consensus 179 i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~l-s~~~~~a~~~~f----~HND----~~~Le~~L~~~--- 246 (476)
T PLN02955 179 MVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRL-AERQGNVEVFVY----RHCD----MYHLNSLLSSC--- 246 (476)
T ss_pred HHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHh-ccccCCceEEEe----CCCC----HHHHHHHHHhC---
Confidence 88763110 000124567888999999999888765 3332 4677777 5555 68888888654
Q ss_pred CCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccc---------cccccCccEEEEcCcccCcCC
Q 012991 188 GKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKI---------DVKEIGADFYVSNLHKWFFCP 258 (452)
Q Consensus 188 ~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~---------~~~~~~~d~~~~s~~K~l~g~ 258 (452)
..+.++|+++...++.|.+.|+++|.++|++||+ ++++|++|+.|.... ++. .+.|+++.|++|. +|.
T Consensus 247 ~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga-~LiVDEAH~~Gv~G~~G~G~~e~~g~~-~di~ii~~TLsKA-~G~ 323 (476)
T PLN02955 247 KMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGF-LLVIDDAHGTFVCGENGGGVAEEFNCE-ADVDLCVGTLSKA-AGC 323 (476)
T ss_pred CCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCc-EEEEcccccCceecCCCCcHHHHhCCC-CCCcEEEEeCccc-hhc
Confidence 3456789999999999999999999999999999 899999999876532 121 2578999999997 677
Q ss_pred CCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHH
Q 012991 259 PSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARML 338 (452)
Q Consensus 259 ~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L 338 (452)
.| |++++++++++. +. .. +. ...+.+..+.....+..++++.+.. + +..+++++++.+++++.
T Consensus 324 ~G-Gfi~gs~~~~~~-l~-~~-----~~----~~ifStalpp~~aaa~laal~l~~~---~-~~~r~~L~~n~~~fr~~- 386 (476)
T PLN02955 324 HG-GFIACSKKWKQL-IQ-SR-----GR----SFIFSTAIPVPMAAAAYAAVVVARK---E-KWRRKAIWERVKEFKAL- 386 (476)
T ss_pred cC-ceeecHHHHHHH-HH-Hh-----CC----CCeecccccHHHHHHHHHHHHHHhc---C-HHHHHHHHHHHHHHHHh-
Confidence 76 888888876654 21 11 00 0111122222333445556666653 2 34567788888888763
Q ss_pred HHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEe
Q 012991 339 ANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARI 418 (452)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRi 418 (452)
.|+.+. ++++.+.+. +......+.+.|.++ ||++.....|.. ......+|+
T Consensus 387 ---~G~~~~------sPI~pI~ig------~~~~a~~~~~~L~~~-Gi~v~~i~yPtV-------------P~g~~rLRi 437 (476)
T PLN02955 387 ---SGVDIS------SPIISLVVG------NQEKALKASRYLLKS-GFHVMAIRPPTV-------------PPNSCRLRV 437 (476)
T ss_pred ---cCCCCC------CCEEEEEeC------CHHHHHHHHHHHHHC-CCEEEEECCCCC-------------CCCCceEEE
Confidence 255431 557766664 455677889999875 999976655533 133458999
Q ss_pred cccccCCHHHHHHHHHHHHHHHhc
Q 012991 419 SHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 419 s~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
+++..+|.+||++++++|+++.+.
T Consensus 438 ~lsA~Ht~edId~lv~~L~~~~~~ 461 (476)
T PLN02955 438 TLSAAHTTEDVKKLITALSSCLDF 461 (476)
T ss_pred eeCCCCCHHHHHHHHHHHHHHHhh
Confidence 999999999999999999998753
No 162
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.94 E-value=3.1e-24 Score=207.32 Aligned_cols=319 Identities=16% Similarity=0.168 Sum_probs=216.0
Q ss_pred CCHHHHHhhhccCCCCeEEeccCCCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEE
Q 012991 24 ISEAEIRDEFSHHQHGVARINNGSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISL 103 (452)
Q Consensus 24 ~~~~~ir~~~~~~~~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~ 103 (452)
.++..+.+++-..++..++|..+..+..++ +.+.. .. ....+.... ..++|+.++++++.+ ++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~-------~~~~y~~~~-~~~lr~~la~~~~~~-~~~i~~ 69 (330)
T TIGR01140 3 GNLRRAAARYGIPPEDWLDFSTGINPLGPP-VPPIP---AS-------AWARYPDPE-YDELRAAAAAYYGLP-AASVLP 69 (330)
T ss_pred ccHHHHHHHcCCChhheeEccccCCCCCCC-hhhcc---hH-------HHhhCCCcc-HHHHHHHHHHHhCCC-hhhEEE
Confidence 456677777766667889998887554433 22211 11 111222233 488999999999985 789999
Q ss_pred ecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhc
Q 012991 104 VDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEK 183 (452)
Q Consensus 104 t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~ 183 (452)
|+|+++++.+++.++ .+| .|++.+|+|.+....+ +..|.+++.+ + + ++.+++.++
T Consensus 70 t~G~~~~i~~~~~~l---------~~g-~vl~~~p~y~~~~~~~----~~~g~~~~~~----~-d-----~~~l~~~~~- 124 (330)
T TIGR01140 70 VNGAQEAIYLLPRLL---------APG-RVLVLAPTYSEYARAW----RAAGHEVVEL----P-D-----LDRLPAALE- 124 (330)
T ss_pred CCCHHHHHHHHHHHh---------CCC-eEEEeCCCcHHHHHHH----HHcCCEEEEe----C-C-----HHHHHhhcc-
Confidence 999999999876643 566 7999999998865554 5569999888 3 1 577777762
Q ss_pred cccCCCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCcccccc----ccCccEEEEcCcccCc
Q 012991 184 GKKDGKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSIKIDVK----EIGADFYVSNLHKWFF 256 (452)
Q Consensus 184 ~~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~----~~~~d~~~~s~~K~l~ 256 (452)
++++|++++|+||||.++| +++|+++|+++|+ ++|+|+++.......++. ..+.++++.|++|+ +
T Consensus 125 ------~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~-~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~ 196 (330)
T TIGR01140 125 ------ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGG-WLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKF-F 196 (330)
T ss_pred ------cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCC-EEEEECcccccCCccchhhHhccCCCEEEEEecchh-h
Confidence 4668999999999999999 5567788899999 799999986433221211 12456888999996 6
Q ss_pred CCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 012991 257 CPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKM 334 (452)
Q Consensus 257 g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l 334 (452)
|++| +|+++++++++.. + ..... ..+.+.. ++.++..++... +-.+..+++++.+++.+
T Consensus 197 g~~G~R~G~i~~~~~~~~~-l-~~~~~-------------~~~~s~~---~q~~~~~~l~~~-~~~~~~~~~~~~~~~~l 257 (330)
T TIGR01140 197 GLAGLRLGFVVAHPALLAR-L-REALG-------------PWTVNGP---ARAAGRAALADT-AWQAATRARLAAERARL 257 (330)
T ss_pred cCchhhhhheeCCHHHHHH-H-HhcCC-------------CCCchHH---HHHHHHHHHhch-HHHHHHHHHHHHHHHHH
Confidence 6566 6999998877665 1 11110 0112222 233334444431 12356778888999999
Q ss_pred HHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccc
Q 012991 335 ARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITG 414 (452)
Q Consensus 335 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (452)
.+.|++++.+++. +. .+.++|+.++ +..++++.|.+ +||.+.++..+.+ ...+
T Consensus 258 ~~~L~~~~~~~~~-~~--~~~f~~~~~~---------~~~~l~~~l~~-~gi~v~pg~~f~~--------------~~~~ 310 (330)
T TIGR01140 258 AALLARLGGLEVV-GG--TALFLLVRTP---------DAAALHEALAR-RGILIRDFDNFPG--------------LDPR 310 (330)
T ss_pred HHHHHhCCCceEC-CC--CCeEEEEEcC---------CHHHHHHHHHH-CCEEEEECCCCCC--------------CCCC
Confidence 9999887545443 22 2678888765 34688999976 5999987766532 2356
Q ss_pred eEEecccccCCHHHHHHHHHHHH
Q 012991 415 YARISHQVYNTLEDYEKFRDAVI 437 (452)
Q Consensus 415 ~iRis~~~~~t~~di~~l~~~l~ 437 (452)
++|++++. ..++ ++++++|+
T Consensus 311 ~iRi~~~~--~~~~-~~~~~~l~ 330 (330)
T TIGR01140 311 YLRFALPT--DEEN-DRLEEALA 330 (330)
T ss_pred EEEEEecC--HHHH-HHHHHhhC
Confidence 99999984 3455 88888763
No 163
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.94 E-value=6.6e-24 Score=210.09 Aligned_cols=333 Identities=16% Similarity=0.148 Sum_probs=222.6
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhC------CCCCCcEEEecChhHH
Q 012991 38 HGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLIN------ADDVGEISLVDNATTA 110 (452)
Q Consensus 38 ~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~~i~~t~g~t~a 110 (452)
..++.|+.+.+. +.|+.+.+++.+........ ...|....+..++|+.++++++ ++ +++|++|+|++++
T Consensus 33 ~~~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~---~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~~t~G~~~a 108 (394)
T PRK06836 33 DNVFDFSLGNPSVPPPAAVKEALRELAEEEDPG---LHGYMPNAGYPEVREAIAESLNRRFGTPLT-ADHIVMTCGAAGA 108 (394)
T ss_pred CCeEEecCcCCCCCCCHHHHHHHHHHHhcCCcC---cccCCCCCCCHHHHHHHHHHHHHHhCCCCC-cCcEEEeCChHHH
Confidence 567888887765 45788888888776432111 1224344567788888888875 33 6899999999999
Q ss_pred HHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCCh-HHH-HHHHHHHHhccccCC
Q 012991 111 AAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASE-EEI-INEFKKGIEKGKKDG 188 (452)
Q Consensus 111 ~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~-~~~-~~~l~~~i~~~~~~~ 188 (452)
+..++.++ +.+||+|++++|.|...... ++..|++++.++++ ++ +.+ ++++++.+ .
T Consensus 109 l~~~~~~l--------~~~gd~Vli~~p~~~~~~~~----~~~~g~~v~~v~~~----~~~~~~d~~~l~~~~------~ 166 (394)
T PRK06836 109 LNVALKAI--------LNPGDEVIVFAPYFVEYRFY----VDNHGGKLVVVPTD----TDTFQPDLDALEAAI------T 166 (394)
T ss_pred HHHHHHHh--------cCCCCEEEEcCCCCccHHHH----HHHcCCEEEEEecC----CccCcCCHHHHHhhc------C
Confidence 99999876 58899999999999875443 45679999999652 22 334 89999988 5
Q ss_pred CceEEEEEeccCCCCcccccH---HHHHHHHHH------cCCCEEEEecccccCCc-----cccccccCccEEEEcCccc
Q 012991 189 KMIRLAIIDHITSMPCVVIPV---RKLVKICRD------EGVDQVFVDAAHAMGSI-----KIDVKEIGADFYVSNLHKW 254 (452)
Q Consensus 189 ~~~~lv~~~~~~n~tG~~~~l---~~i~~l~~~------~~~~~~ivD~a~~~g~~-----~~~~~~~~~d~~~~s~~K~ 254 (452)
+++++|++++++||||.++|. ++|+++|++ ||+ ++|+|+++..-.. +.-....+-.+++.|++|.
T Consensus 167 ~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~-~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 245 (394)
T PRK06836 167 PKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPI-YLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKS 245 (394)
T ss_pred cCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCe-EEEEeccccccccCCCCCCChHHccCcEEEEecchhh
Confidence 689999999999999999985 466777888 899 7999998753211 1101122346788899995
Q ss_pred CcCCCC--cEEEEEecCcccc-CCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHH
Q 012991 255 FFCPPS--VAFLYCRKSILSS-DMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQA 331 (452)
Q Consensus 255 l~g~~G--~G~l~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~ 331 (452)
+|.+| +|+++++++..+. .+...... . .. ..+... .+.....++...+.+ +. .++.+++.+
T Consensus 246 -~~~pGlRiG~~~~~~~~~~~~~~~~~~~~---~-----~~-~~~~~~-~~~~~q~~~~~~l~~---~~--~~~~~~~~r 309 (394)
T PRK06836 246 -LSLPGERIGYIAVNPEMEDADDLVAALVF---A-----NR-ILGFVN-APALMQRVVAKCLDA---TV--DVSIYKRNR 309 (394)
T ss_pred -ccCcceeeEEEecCHHHhhhHHHHHHHHH---H-----hh-cccccc-CCHHHHHHHHHHhCC---hH--HHHHHHHHH
Confidence 66555 8898887665331 00000000 0 00 000001 111112222223322 21 244566777
Q ss_pred HHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCC
Q 012991 332 LKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGI 411 (452)
Q Consensus 332 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~ 411 (452)
+.+.+.|.+. |+.+..+.+ +.++|+.+| . .+..++++.|.+ +||.+.++..+ .
T Consensus 310 ~~l~~~L~~~-g~~~~~~~g--g~~~~~~~~------~-~~~~~~~~~l~~-~gv~v~~g~~f----------------~ 362 (394)
T PRK06836 310 DLLYDGLTEL-GFECVKPQG--AFYLFPKSP------E-EDDVAFCEKAKK-HNLLLVPGSGF----------------G 362 (394)
T ss_pred HHHHHHHHhC-CCEeecCCc--eEEEEEeCC------C-CCHHHHHHHHHh-CCEEEECchhc----------------C
Confidence 8888888876 666554443 677888776 2 356778888865 59999876554 1
Q ss_pred ccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 412 ITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 412 ~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
.++++||+++ .++++++..++.|+++++.
T Consensus 363 ~~~~iRi~~~--~~~~~~~~~i~~l~~~l~~ 391 (394)
T PRK06836 363 CPGYFRLSYC--VDTETIERSLPAFEKLAKE 391 (394)
T ss_pred CCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 2479999998 3789999999999999865
No 164
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=4.7e-24 Score=208.64 Aligned_cols=291 Identities=15% Similarity=0.087 Sum_probs=198.5
Q ss_pred HHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCC-CEEEEeCCcchhHHHHHHHHHHhcCcEEEE
Q 012991 82 ILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRN-DTVLMLHCAFQAVKKSIQAYVTRAGGSVVE 160 (452)
Q Consensus 82 ~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g-~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~ 160 (452)
..++|+.++++++++ +++|++|+|+++++.+++.++ +.+| ++|++++|.|...... ++..|.+++.
T Consensus 61 ~~~lr~~ia~~~~~~-~~~I~~t~G~~~~l~~~~~~~--------~~~g~~~vlv~~p~y~~~~~~----~~~~g~~~~~ 127 (364)
T PRK04781 61 PPGLRSALAALYGCA-PEQLLIGRGSDEAIDLLVRAL--------CVPGRDAVLVTPPVFGMYAVC----ARLQNAPLVE 127 (364)
T ss_pred HHHHHHHHHHHhCcC-hHHEEEeCCHHHHHHHHHHHh--------cCCCCCeEEEcCCChHHHHHH----HHHcCCEEEE
Confidence 578999999999996 789999999999999999976 4677 7999999988654332 4557999999
Q ss_pred EeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHH--cCCCEEEEecccccCCcc-
Q 012991 161 VQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRD--EGVDQVFVDAAHAMGSIK- 236 (452)
Q Consensus 161 ~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~--~~~~~~ivD~a~~~g~~~- 236 (452)
+++..+ ++...+ ++++++.+. .+++++|++++++||||.++|.+++.++++. +++ ++|+|+++......
T Consensus 128 v~~~~~-~~~~~~d~~~l~~~~~-----~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~-~iI~Deay~~f~~~~ 200 (364)
T PRK04781 128 VPLVDG-ADGFHADVPAIVAAAL-----ASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKA-LVVVDEAYGEFSDVP 200 (364)
T ss_pred EecCCC-ccCCCcCHHHHHHHHh-----ccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCc-EEEEeCcchhhcCCc
Confidence 965211 111123 566655443 4689999999999999999999988888765 378 79999997632211
Q ss_pred --cc-ccccCccEEEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHH
Q 012991 237 --ID-VKEIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVT 311 (452)
Q Consensus 237 --~~-~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 311 (452)
.. ....+--+++.|++|. +|.+| +|+++.++++++. + ...... ...+... ...+..
T Consensus 201 ~~~~~~~~~~~vi~~~SfSK~-~gl~GlRvGy~v~~~~l~~~-l-~~~~~~-------------~~~~~~~---~~~a~~ 261 (364)
T PRK04781 201 SAVGLLARYDNLAVLRTLSKA-HALAAARIGSLIANAELIAV-L-RRCQAP-------------YPVPTPC---AALAEQ 261 (364)
T ss_pred chHHHHhhCCCEEEEecChhh-cccccceeeeeeCCHHHHHH-H-HhccCC-------------CCCCHHH---HHHHHH
Confidence 11 1112234778899995 77666 8999988887765 2 111000 1111112 222333
Q ss_pred HHHHhh-cCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeee
Q 012991 312 FVSRFE-GGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPI 390 (452)
Q Consensus 312 ~~~~~~-~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~ 390 (452)
++.... .-.....+++++.++.+.+.|..++++....|+. ++++|+.++ +..++.+.|.+ .||.++.
T Consensus 262 ~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~--g~f~~~~~~---------~~~~~~~~l~~-~gI~v~~ 329 (364)
T PRK04781 262 ALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQ--GNFLLVRFD---------DAEAAFQALLA-AGVVVRD 329 (364)
T ss_pred HHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCC--CcEEEEEcC---------CHHHHHHHHHH-CCeEEee
Confidence 333200 0123344456777888999998876654233444 788898875 34678888866 5999987
Q ss_pred cccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 391 HYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
+..+. ..++++||+++ +.++.++++++|+++..
T Consensus 330 ~~~~~---------------~~~~~~Ris~~---~~~~~~~l~~al~~~~~ 362 (364)
T PRK04781 330 QRAAP---------------RLSDALRITLG---TPEQNDRVLAALQRTQA 362 (364)
T ss_pred CCCCC---------------CCCCeEEEeCC---CHHHHHHHHHHHHHHHh
Confidence 64331 22579999998 79999999999998754
No 165
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.93 E-value=1.9e-24 Score=208.68 Aligned_cols=345 Identities=13% Similarity=0.060 Sum_probs=237.7
Q ss_pred EeccCCCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCC-cEEEecChhHHHHHHHHHhhc
Q 012991 42 RINNGSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVG-EISLVDNATTAAAIVLQQIGR 120 (452)
Q Consensus 42 ~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~-~i~~t~g~t~a~~~~~~~l~~ 120 (452)
+|..|+.-..|....+++++.. .+. ++.+..+.+++.++++.+.++++.++.. .+++++|||.+++.++.++.
T Consensus 6 ~f~~gp~~~~~~~~~~~~~~~~---~~~--~HRs~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~- 79 (374)
T TIGR01365 6 CFSSGPCAKRPGWSIEELKNAP---LGR--SHRSKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSML- 79 (374)
T ss_pred CcCCCccCCCchhhHHHHhhhh---ccc--CcCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcC-
Confidence 3444444445554555555422 122 2456788899999999999999985222 35668999999999999872
Q ss_pred ccccCCCCCCCEEEEeCCcchhHHHHHH-HHHHhcCc-EEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEe
Q 012991 121 GFTEGRFHRNDTVLMLHCAFQAVKKSIQ-AYVTRAGG-SVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIID 197 (452)
Q Consensus 121 ~~~~~~~~~g~~Vl~~~~~~~s~~~~~~-~~a~~~g~-~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~ 197 (452)
-++|++|++.. .+...|. .+|++.|+ ++..+..+|.. .+ +++++. . +.|.++
T Consensus 80 ------~~~g~~vLv~g----~FG~r~~~eia~~~g~~~v~~l~~~~g~----~~~~~~ve~--------~---~~v~~v 134 (374)
T TIGR01365 80 ------GCRGVDVLAWE----SFGKGWVTDVTKQLKLPDVRVLEAEYGK----LPDLKKVDF--------K---NDVVFT 134 (374)
T ss_pred ------CCCCCeEEEEC----HHHHHHHHHHHHhcCCCCcEEEcCCCCC----CCCHHHcCC--------C---CCEEEe
Confidence 14788888753 3345555 66888999 47777553321 12 555541 1 126799
Q ss_pred ccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCccccCCC-
Q 012991 198 HITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMH- 276 (452)
Q Consensus 198 ~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~- 276 (452)
|..++||+..|+++|.+.+ +++ +++||+++++|..+++++. +|++++|.+|+|.+|+|+++++++++.+++ ..
T Consensus 135 hnETSTGv~npv~~i~~~~--~~~-lliVDavSs~g~~~l~~d~--iDv~~tgsQK~L~~ppGls~v~vs~~Al~~-~~~ 208 (374)
T TIGR01365 135 WNGTTSGVRVPNGDFIPAD--REG-LTICDATSAAFAQDLDYHK--LDVVTFSWQKVLGGEGAHGMLILSPRAVAR-LES 208 (374)
T ss_pred cCCCchheecccccccccc--CCC-cEEEEccchhcCCCCChhH--CcEEEEechhccCCCCceEEEEECHHHHHH-Hhh
Confidence 9999999999997765332 489 8999999999999999984 899999999999999999999999888765 11
Q ss_pred -CCc------eeccCCCC---cccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 012991 277 -HPV------VSHEFGNG---LPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSL 346 (452)
Q Consensus 277 -~~~------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~ 346 (452)
.++ +....... ......++.||+...++++..+++++.+ ++|+++..+|.+++++.+++++++++.+.+
T Consensus 209 ~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~-egGle~~~~Rh~~~a~~l~~~l~~lg~l~~ 287 (374)
T TIGR01365 209 YTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAES-IGGLKPLIARADDNLAVLEAFVAKNNWIHF 287 (374)
T ss_pred cCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence 111 11000000 0011234567777777777777877775 358999999999999999999999833666
Q ss_pred CCC-cc-cccceEEEEcCCc-c---ccCChhh-HHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEec
Q 012991 347 GSP-PE-ICAAMVMVGLPSR-L---RVMGEDD-ALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARIS 419 (452)
Q Consensus 347 ~~~-~~-~~~~~~~~~~~~~-~---~~~~~~~-~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis 419 (452)
... +. ....++.+.++.. . +...+++ ..++.+.|.++ ||.+..+... ..+..+||+
T Consensus 288 ~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~i~~G~~~----------------~~~~~fRIg 350 (374)
T TIGR01365 288 LAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKE-GVAYDIGSYR----------------DAPSGLRIW 350 (374)
T ss_pred CCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHHHHHC-CEEEeccccc----------------cCCCceEEe
Confidence 553 22 2234555666421 0 0001122 57899999775 9988544432 234789999
Q ss_pred ccccCCHHHHHHHHHHHHHHHh
Q 012991 420 HQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 420 ~~~~~t~~di~~l~~~l~~~~~ 441 (452)
.....+.+|++.+++.|.-+..
T Consensus 351 ~~G~i~~~di~~l~~~l~~~~~ 372 (374)
T TIGR01365 351 CGATVEKSDLECLCPWLDWAFA 372 (374)
T ss_pred cCCcCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999987654
No 166
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.93 E-value=3.2e-24 Score=210.80 Aligned_cols=310 Identities=15% Similarity=0.198 Sum_probs=205.6
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|++...+..+++++.+++++|.+ .+++++||++|+..++.++ +++||+|+++++.|.+.+..+...+..
T Consensus 55 y~r~~~p~~~~le~~la~l~g~~---~~v~~ssG~~Ai~~al~al--------~~~Gd~Vi~~~~~y~~t~~~~~~~~~~ 123 (390)
T PRK08133 55 YSRFTNPTVTMFQERLAALEGAE---ACVATASGMAAILAVVMAL--------LQAGDHVVSSRSLFGSTVSLFEKIFAR 123 (390)
T ss_pred eECCCChHHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHH--------hCCCCEEEEccCcchhHHHHHHHHHHH
Confidence 34444667899999999999984 5788999999999998876 589999999999999988777655677
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|++++.+++ ++ .+++++++ .+++++|++++++||+|.+.|+++|+++|+++|+ ++++|++++.+
T Consensus 124 ~G~~v~~vd~----~d----~~~l~~~i------~~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi-~livD~t~~~~ 188 (390)
T PRK08133 124 FGIETTFVDL----TD----LDAWRAAV------RPNTKLFFLETPSNPLTELADIAALAEIAHAAGA-LLVVDNCFCTP 188 (390)
T ss_pred cCcEEEEECC----CC----HHHHHHhc------CcCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCC-EEEEECCCccc
Confidence 8999999943 33 57788888 5789999999999999999999999999999999 79999998766
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--c-EEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHH
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--V-AFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAV 310 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~-G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 310 (452)
...... ..++|+++.|++|++ +++| . |+++.+++.+.+ + ..... ..+. ..+......++
T Consensus 189 ~~~~pl-~~g~Divv~S~sK~~-~g~g~~~GG~vv~~~~~~~~-~-~~~~~------------~~g~--~~~~~~a~~~l 250 (390)
T PRK08133 189 ALQQPL-KLGADVVIHSATKYL-DGQGRVLGGAVVGSKELMEE-V-FGFLR------------TAGP--TLSPFNAWVFL 250 (390)
T ss_pred ccCCch-hhCCcEEEeecceee-cCCcceEeEEEEcCHHHHHH-H-HHHHH------------HhCC--CCCHHHHHHHH
Confidence 543222 347899999999984 4444 3 667677665543 1 11100 0011 11111112222
Q ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc--------------ccccceEEEEcCCccccCChhhHHH
Q 012991 311 TFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP--------------EICAAMVMVGLPSRLRVMGEDDALR 375 (452)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (452)
+-+. .+....++..+++..+.+.|.+.++++ ++.|. ...++++.|.+.. +.....+
T Consensus 251 ~gl~----tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~-----~~~~~~~ 321 (390)
T PRK08133 251 KGLE----TLSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKG-----GREAAWR 321 (390)
T ss_pred cccc----hHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcC-----CHHHHHH
Confidence 2222 245555666788889999999887763 33331 1347899998851 1233556
Q ss_pred HHHHHhhhcceEeeecc-cC----CCCCCCCCCCC--CCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 376 LRGHLRVRFGVEVPIHY-QA----PKDDGQPQAGA--RDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 376 l~~~L~~~~gI~v~~~~-~~----~~~~~~~~~~~--~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
+.+.|. -+.+.+..+. .+ +....+..... ++..+..++.||+|++. ||++.+++.|++.++
T Consensus 322 f~~~l~-l~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 389 (390)
T PRK08133 322 VIDATR-LISITANLGDTKTTITHPATTTHGRLSPEARAAAGITEGLIRVAVGL----EDVADIKADLARGLA 389 (390)
T ss_pred HHHhCC-cceEeccCCCcceeeecCCCCCcccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHhh
Confidence 666663 2344433221 10 00000000000 11225567899999984 566777777776653
No 167
>PLN02271 serine hydroxymethyltransferase
Probab=99.93 E-value=6.8e-24 Score=208.44 Aligned_cols=359 Identities=13% Similarity=0.047 Sum_probs=247.0
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHHhcC--Cch-hhh--hhhhHHHHHHHHHHHhHhCCCCCCc--E-EEecChhH
Q 012991 38 HGVARINNGSFGSCPKSVLADQQKWQLKFLQQ--PDD-FYF--NSLRKGILESRAAVKDLINADDVGE--I-SLVDNATT 109 (452)
Q Consensus 38 ~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~--~~~-~~~--~~~~~~~~~~~~~la~~~~~~~~~~--i-~~t~g~t~ 109 (452)
...+.|- ++-...++.|++++...+..-+.. |.. +|. ...+++...+.++..++|+++ .+. + +..-||+.
T Consensus 148 ~~~l~LI-ASEN~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~-~~~~gaNVQp~SGs~ 225 (586)
T PLN02271 148 FKGIELI-ASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLD-SEKWGVNVQPYSCTS 225 (586)
T ss_pred hcCeeec-cccccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCc-ccccccceeeccHHH
Confidence 4455554 445677777999987776553332 222 222 233556677889999999986 311 1 45558899
Q ss_pred HHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHH-----HHHHhcCcEEEEEeCCCCCC-ChHHH-HHHHHHHHh
Q 012991 110 AAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQ-----AYVTRAGGSVVEVQLPFPLA-SEEEI-INEFKKGIE 182 (452)
Q Consensus 110 a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~-----~~a~~~g~~v~~~~~~~~~~-~~~~~-~~~l~~~i~ 182 (452)
|+..++.++ ++|||+|+..+.+|.++..... ..+...|..+..++. +.+ +.+.+ ++++++.+.
T Consensus 226 AN~aV~~AL--------l~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY--~~d~~~g~IDyd~lek~a~ 295 (586)
T PLN02271 226 ANFAVYTGL--------LLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPY--KVNPQTGYIDYDKLEEKAL 295 (586)
T ss_pred HHHHHHHHh--------cCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEc--ccccccCccCHHHHHHHhh
Confidence 999999987 6999999998888777654321 113445777777654 333 34556 999998554
Q ss_pred ccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCcccccc---ccCccEEEEcCcccCcCCC
Q 012991 183 KGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVK---EIGADFYVSNLHKWFFCPP 259 (452)
Q Consensus 183 ~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~---~~~~d~~~~s~~K~l~g~~ 259 (452)
..+|++|++.+..++ ..+|+++|+++|+++|+ ++++|++|..|.+..+.. ..++|++++|+||||.||.
T Consensus 296 -----~~rPKLII~g~Sayp--r~~D~~~i~eIAdevGA-~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TTHKtLrGPr 367 (586)
T PLN02271 296 -----DFRPKILICGGSSYP--REWDYARFRQIADKCGA-VLMCDMAHISGLVAAKECVNPFDYCDIVTSTTHKSLRGPR 367 (586)
T ss_pred -----hcCCeEEEECchhcc--CcCCHHHHHHHHHHcCC-EEEEECcccccccccCcCCCCCcCCcEEEeCCcccCCCCC
Confidence 589999999887776 67899999999999999 899999999998865532 2258999999999999999
Q ss_pred CcEEEEEecCccccCCCCCceeccCCC-----------CcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHH
Q 012991 260 SVAFLYCRKSILSSDMHHPVVSHEFGN-----------GLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNH 328 (452)
Q Consensus 260 G~G~l~~~~~~~~~~l~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~ 328 (452)
| |+++++++.... ..+....+.+. ......+. |.+....++++..++..+... .++.+.+++.
T Consensus 368 G-G~I~~r~~~~~~--~~g~~gs~s~~~~~~d~~~kI~~aVfPglq-gGphn~~IAalAvalkea~~~--efk~Ya~QVv 441 (586)
T PLN02271 368 G-GIIFYRKGPKLR--KQGMLLSHGDDNSHYDFEEKINFAVFPSLQ-GGPHNNHIAALAIALKQVATP--EYKAYMQQVK 441 (586)
T ss_pred c-eEEEeccccccc--ccCCccccccccccHHHHHHhhcccCCccc-cChhHHHHHHHHHHHHHHhCh--HHHHHHHHHH
Confidence 9 888888764432 11111100100 00011122 333334588888888877754 6788999999
Q ss_pred HHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCC
Q 012991 329 EQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDK 408 (452)
Q Consensus 329 ~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~ 408 (452)
++++.|.+.|.+. |+++.... ...+.+++.+.. .+.+...+.+.| ++.||.+.....+...+
T Consensus 442 ~NAkaLA~~L~~~-G~~vv~gg-TdnHlvLvDl~~-----~g~~G~~ae~~L-e~~~I~~Nkn~iP~d~~---------- 503 (586)
T PLN02271 442 KNAQALASALLRR-KCRLVTGG-TDNHLLLWDLTT-----LGLTGKNYEKVC-EMCHITLNKTAIFGDNG---------- 503 (586)
T ss_pred HHHHHHHHHHHHC-CCeEeeCC-CCcceeeecCcc-----cCCCHHHHHHHH-HHcCeEeccccCCCCCC----------
Confidence 9999999999887 88876543 236788877742 244666666666 45699985433332111
Q ss_pred CCCccceEEecccccCC----HHHHHHHHHHHHHHHh
Q 012991 409 DGIITGYARISHQVYNT----LEDYEKFRDAVILLVE 441 (452)
Q Consensus 409 ~~~~~~~iRis~~~~~t----~~di~~l~~~l~~~~~ 441 (452)
...++.|||+....++ ++|++.+.+.|.++++
T Consensus 504 -~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 504 -TISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred -CCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 3456789999876664 6889999999998886
No 168
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.93 E-value=1.2e-24 Score=211.32 Aligned_cols=316 Identities=14% Similarity=0.103 Sum_probs=204.2
Q ss_pred CcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCC
Q 012991 51 CPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRN 130 (452)
Q Consensus 51 ~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g 130 (452)
.|+.+++++.+..... . .+......+++++.+++++| + +++++++|||+++..++.++ +++|
T Consensus 10 ~~~~v~~a~~~~~~~~-----~--~~~~~~~~~~l~~~~a~~~g-~--~~~~~~~~gt~a~~~~~~~l--------~~~g 71 (338)
T cd06502 10 PTPEMLEAMAAANVGD-----D--VYGEDPTTAKLEARAAELFG-K--EAALFVPSGTAANQLALAAH--------TQPG 71 (338)
T ss_pred CCHHHHHHHHhcccCC-----c--ccCCCHHHHHHHHHHHHHhC-C--CeEEEecCchHHHHHHHHHh--------cCCC
Confidence 4555888887754211 1 23345668899999999999 4 67889999999999998876 4889
Q ss_pred CEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccc-cCCCceEEEEEeccCCCCccc--
Q 012991 131 DTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGK-KDGKMIRLAIIDHITSMPCVV-- 206 (452)
Q Consensus 131 ~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~-~~~~~~~lv~~~~~~n~tG~~-- 206 (452)
|+|++++++|.+...... .+...|++++.++. +. +.+ ++++++++++.. .+.+++++|++++++|+ |.+
T Consensus 72 d~v~~~~~~~~~~~~~~~-~~~~~g~~~~~v~~----~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~ 144 (338)
T cd06502 72 GSVICHETAHIYTDEAGA-PEFLSGVKLLPVPG----EN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYP 144 (338)
T ss_pred CeEEEecCcceeeecCCc-HHHHcCceEEeecC----CC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccC
Confidence 999999999987654321 13446999998853 32 334 889999885310 00137899999999997 544
Q ss_pred -ccHHHHHHHHHHcCCCEEEEecccccCC-----ccccccccCccEEEEcCcccCcCCCCcEEEEEecCccccCCCCCce
Q 012991 207 -IPVRKLVKICRDEGVDQVFVDAAHAMGS-----IKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMHHPVV 280 (452)
Q Consensus 207 -~~l~~i~~l~~~~~~~~~ivD~a~~~g~-----~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~~~~~ 280 (452)
.++++|+++|+++|+ ++|+|++|..+. ..+.....++|+++.|+||++ +.+|.++++.++++++. + ....
T Consensus 145 ~~~l~~i~~~~~~~~~-~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~-~~~~g~~~~~~~~~~~~-~-~~~~ 220 (338)
T cd06502 145 LDELKAISALAKENGL-PLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGG-GAPVGAVVVGNRDFIAR-A-RRRR 220 (338)
T ss_pred HHHHHHHHHHHHHcCC-eEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccC-CCccceEEECCHHHHHH-H-HHHH
Confidence 346779999999999 799999874321 122211236889999999985 44443455667776664 1 1110
Q ss_pred eccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEE
Q 012991 281 SHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVG 360 (452)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 360 (452)
. .++ ++..... ....+++..+.. .+.....++..++++++.+.|.++ ++.+.. . ..+++.+.
T Consensus 221 ~-~~~----------~~~~~~~-~~~~a~~~~L~~--~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~-~--~~~~~~v~ 282 (338)
T cd06502 221 K-QAG----------GGMRQSG-FLAAAGLAALEN--DLWLRRLRHDHEMARRLAEALEEL-GGLESE-V--QTNIVLLD 282 (338)
T ss_pred H-HhC----------CChhhHH-HHHHHHHHHhcC--chHHHHHHHHHHHHHHHHHHHHhc-CCCccc-c--cCCeEEEe
Confidence 0 000 1111111 122223333332 245666778888899999999887 554332 2 26677776
Q ss_pred cCCccccCChhhHHHHHHHHhh--hcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHH
Q 012991 361 LPSRLRVMGEDDALRLRGHLRV--RFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVIL 438 (452)
Q Consensus 361 ~~~~~~~~~~~~~~~l~~~L~~--~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~ 438 (452)
.+. ...-..++.+.+.+ +.|+.+... ..+++|++++.++|++|++++++++++
T Consensus 283 ~~~-----~~~~~~~l~~~l~~~~~~gi~~~~~--------------------~~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 283 PVE-----ANAVFVELSKEAIERRGEGVLFYAW--------------------GEGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred cCC-----ccHHHHHHHHHHHHhhhCCEEEEec--------------------CCCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 641 11122334444421 248887431 126899999999999999999999865
No 169
>PLN02231 alanine transaminase
Probab=99.93 E-value=7.4e-24 Score=214.94 Aligned_cols=369 Identities=16% Similarity=0.139 Sum_probs=225.6
Q ss_pred HHHHHhhhcc-CCCCeEEeccCCCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh----CCC-CCC
Q 012991 26 EAEIRDEFSH-HQHGVARINNGSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI----NAD-DVG 99 (452)
Q Consensus 26 ~~~ir~~~~~-~~~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~-~~~ 99 (452)
...+|+.+.. ..+.++.|.. +....|..+++...+.+... .+.....|....+..++|+.|++++ |.+ +++
T Consensus 116 ~~~~r~v~~~~~~p~~i~~~~-~~~~fp~~~i~~a~~~l~~~--~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe 192 (534)
T PLN02231 116 ITFFREVLALCDHPSLLDKSE-THGLFSADAIERAWQILDQI--PGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPN 192 (534)
T ss_pred cHHHHHHHHhccCCccCCCCC-ccccCCHHHHHHHHHHHHhc--CCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcc
Confidence 4444554432 2345666653 23344445555555544321 1222334666778888999999987 322 368
Q ss_pred cEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHH
Q 012991 100 EISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFK 178 (452)
Q Consensus 100 ~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~ 178 (452)
+|++|+|+++|+.+++.++. ..+||.|+++.|.|+.....+. ..|.+++.++++. ++...+ +++|+
T Consensus 193 ~I~iT~Ga~~ai~~~~~~l~-------~~~gd~Vli~~P~Y~~y~~~~~----~~g~~~v~~~l~~--~~~~~~d~~~Le 259 (534)
T PLN02231 193 DIFLTDGASPAVHMMMQLLI-------RSEKDGILCPIPQYPLYSASIA----LHGGTLVPYYLDE--ATGWGLEISELK 259 (534)
T ss_pred cEEEeCCHHHHHHHHHHHhc-------cCCCCEEEEeCCCChhHHHHHH----HcCCEEEEEecCc--ccCCCCCHHHHH
Confidence 99999999999999999872 1479999999999998765554 4588999886531 112234 88899
Q ss_pred HHHhccccCCCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCc-----cccccc---------
Q 012991 179 KGIEKGKKDGKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSI-----KIDVKE--------- 241 (452)
Q Consensus 179 ~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~-----~~~~~~--------- 241 (452)
+.++.......+++++++++|+||||.+++ +++|+++|++||+ ++|+|+++..-.. ...+..
T Consensus 260 ~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l-~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~ 338 (534)
T PLN02231 260 KQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGL-VLLADEVYQENVYVPDKKFHSFKKVARSMGYGE 338 (534)
T ss_pred HHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCC-EEEEEccchhcccCCCCCcccHHHHHhhhcccc
Confidence 888643222337899999999999999997 4578899999999 7999999764221 111111
Q ss_pred cCc-cEEEEcCcccCcCCCC--cEEEEE---ecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHH----
Q 012991 242 IGA-DFYVSNLHKWFFCPPS--VAFLYC---RKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVT---- 311 (452)
Q Consensus 242 ~~~-d~~~~s~~K~l~g~~G--~G~l~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~---- 311 (452)
.+. -+++.|++|.++|.+| +|++.+ ++++++. +. ... ... ..++...+.+...+++
T Consensus 339 ~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~-l~-k~~-----------~~~-~~s~~~~Q~~~~~~l~~p~~ 404 (534)
T PLN02231 339 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQ-IY-KVA-----------SVN-LCSNISGQILASLVMSPPKP 404 (534)
T ss_pred CCceEEEEeccCcccccCCccceEEEEEecCCHHHHHH-HH-HHH-----------hhh-cCCChHHHHHHHHHhCCCCC
Confidence 011 2556699997666555 788876 4555554 11 010 000 1122222322222321
Q ss_pred ---HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEE--cCCcc-cc---CChhhHHHHHHHHhh
Q 012991 312 ---FVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVG--LPSRL-RV---MGEDDALRLRGHLRV 382 (452)
Q Consensus 312 ---~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~---~~~~~~~~l~~~L~~ 382 (452)
.........+.+++.++++++.+.+.|.+++++.+..|++ +.++|.. +|... .. ....+...++..|.+
T Consensus 405 ~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p~G--gfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~ 482 (534)
T PLN02231 405 GDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNKAEG--AMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLN 482 (534)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCe--eeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHH
Confidence 0011000123456778889999999998877887766655 6667733 33100 00 000112345666666
Q ss_pred hcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 383 RFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 383 ~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
+.||.+.++..+... ....++|+++. .+.++++..+++|+++++.
T Consensus 483 ~~GV~vvPGs~Fg~~-------------~g~~~~Rit~~--~~~e~l~eal~RL~~~~~~ 527 (534)
T PLN02231 483 ATGIVVVPGSGFGQV-------------PGTWHFRCTIL--PQEDKIPAIVSRLTEFHKS 527 (534)
T ss_pred hcCEEEeCCcccCCC-------------CCCCeEEEEeC--CCHHHHHHHHHHHHHHHHH
Confidence 679999877665221 22347999986 4788888888888777654
No 170
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.93 E-value=3.5e-24 Score=207.06 Aligned_cols=280 Identities=13% Similarity=0.100 Sum_probs=192.4
Q ss_pred HHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEE
Q 012991 81 GILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVE 160 (452)
Q Consensus 81 ~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~ 160 (452)
...+++++++++++.+ +++|++|+|+++++.+++.. +.++ .|++.+|.|......+ +..|.+++.
T Consensus 41 ~~~~lr~~ia~~~~~~-~~~I~it~Gs~~~l~~~~~~---------~~~~-~vv~~~P~y~~y~~~~----~~~G~~v~~ 105 (332)
T PRK06425 41 SYTDIEDQIKIYTQGL-KIKVLIGPGLTHFIYRLLSY---------INVG-NIIIVEPNFNEYKGYA----FTHGIRISA 105 (332)
T ss_pred CHHHHHHHHHHHhCCC-cceEEECCCHHHHHHHHHHH---------hCCC-cEEEeCCChHHHHHHH----HHcCCeEEE
Confidence 3788999999999997 89999999999999998863 2565 5777799998765554 556999999
Q ss_pred EeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccH---HHHHHHHHHcCCCEEEEecccccCCcc-
Q 012991 161 VQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPV---RKLVKICRDEGVDQVFVDAAHAMGSIK- 236 (452)
Q Consensus 161 ~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l---~~i~~l~~~~~~~~~ivD~a~~~g~~~- 236 (452)
++++ ..+...+ .++ ..++++|++++|+||||.+++. ++|+++|+++++ ++|+|+++..-...
T Consensus 106 vp~~----~~~~~~~----~l~-----~~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~-~iI~DE~Y~~~~~~~ 171 (332)
T PRK06425 106 LPFN----LINNNPE----ILN-----NYNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGA-LLFIDEAFIDFVPNR 171 (332)
T ss_pred EeCC----cccCcHH----HHh-----hcCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCC-EEEEecchhcccccc
Confidence 9653 2111122 232 2478899999999999999985 466777899999 79999997532211
Q ss_pred ----ccc-cccCccEEEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHH
Q 012991 237 ----IDV-KEIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSA 309 (452)
Q Consensus 237 ----~~~-~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 309 (452)
... ...+-.+++.|++|. +|.+| +|++++++++++. +. ... .+......+. .+
T Consensus 172 ~~~~~~~~~~~~~vi~~~SfSK~-~~l~GlRiGy~v~~~~li~~-l~-~~~----------------~~~~~~~~~~-~~ 231 (332)
T PRK06425 172 AEEDVLLNRSYGNVIIGRSLTKI-LGIPSLRIGYIATDDYNMKI-SR-KIT----------------EPWSVCDPAI-DF 231 (332)
T ss_pred chhHHHHhccCCCEEEEeecHHh-cCCchhhheeeecCHHHHHH-HH-HcC----------------CCCccCHHHH-HH
Confidence 011 111235777899995 77777 7999998887765 21 110 0000011111 11
Q ss_pred HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEee
Q 012991 310 VTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVP 389 (452)
Q Consensus 310 l~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~ 389 (452)
+..... ..-.++.++.+++.++++.+.|.+. ++.+..++. ++++|+.++ +..++.+.|.++ ||.+.
T Consensus 232 l~~~~~-~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~--g~f~~~~~~---------~~~~~~~~l~~~-gi~v~ 297 (332)
T PRK06425 232 IRSIDL-DYVAKHSLDIMENERSYLINNLEAM-GFRAAGDPS--ANFITFMIP---------DAHDFYSYLLKN-GILVR 297 (332)
T ss_pred HHHhhh-HHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCC--ceEEEEEcC---------CHHHHHHHHHHC-CeEEE
Confidence 211110 0013456777888889999999886 666554443 678888774 456888888774 99998
Q ss_pred ecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHH
Q 012991 390 IHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLV 440 (452)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~ 440 (452)
++..+.. ..++++|||++ +.++.++++++|++++
T Consensus 298 ~~~~f~~--------------~~~~~iRis~~---~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 298 LLDDYEC--------------LGEQYIRIAIR---RRSFNIKLVNALRNFL 331 (332)
T ss_pred ECCCCCC--------------CCCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 7655421 22479999998 7999999999999875
No 171
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=4.1e-24 Score=208.57 Aligned_cols=312 Identities=13% Similarity=0.126 Sum_probs=206.0
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|++...+..+.+++++|++.|. +++++++||++|+.+++.++ +++||+|+++++.|.+.+..+......
T Consensus 47 Y~R~~npt~~~Le~~lA~leg~---e~ivvt~gg~~Ai~~~l~al--------l~~Gd~Il~~~~~y~~~~~~~~~~~~~ 115 (388)
T PRK08861 47 YTRSGNPNRGLLEQTLSELESG---KGAVVTNCGTSALNLWVSAL--------LGPDDLIVAPHDCYGGTYRLFNTRANK 115 (388)
T ss_pred ccCCCCchHHHHHHHHHHHhCC---CeEEEECCHHHHHHHHHHHH--------cCCCCEEEEcCCchHHHHHHHHHHHhc
Confidence 5555566789999999999997 59999999999999999987 589999999999999877777555566
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|+++..++ ..+ ++++++++ .+++++|++++|+||||.+.|+++|.++|+++|+ ++++|++++.+
T Consensus 116 ~gi~v~~vd----~~d----~e~l~~~i------~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi-~vIvDea~~~~ 180 (388)
T PRK08861 116 GDFKVQFVD----QSD----AAALDAAL------AKKPKLILLETPSNPLVRVVDIAELCQKAKAVGA-LVAVDNTFLTP 180 (388)
T ss_pred CCeEEEEEC----CCC----HHHHHHhc------CcCCeEEEEECCCCCCCcccCHHHHHHHHHHcCC-EEEEECCcccc
Confidence 788888883 222 67888888 5789999999999999999999999999999999 79999999877
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHH
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVT 311 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 311 (452)
.....+ ..++|+++.|+|||++|+.+ .|+++.+++.+...+ ... ....| ...+.. .....++
T Consensus 181 ~~~~pl-~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~-~~~-~~~~G----------~~~~p~---~a~l~~r 244 (388)
T PRK08861 181 VLQKPL-ELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEEL-AWW-GNCIG----------ATGTPF---DSYMTLR 244 (388)
T ss_pred ccCCCc-ccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHH-HHH-HhccC----------CCCChH---HHHHHHh
Confidence 543222 35899999999999888765 466666543222101 000 00011 111111 1111222
Q ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc--------------ccccceEEEEcCCccccCChhhHHHH
Q 012991 312 FVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP--------------EICAAMVMVGLPSRLRVMGEDDALRL 376 (452)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~l 376 (452)
-++ .+.--.++..+++..+.+.|++.|.++ |..|. ...++++.|.+.. +.....++
T Consensus 245 gl~----Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~-----~~~~~~~f 315 (388)
T PRK08861 245 GIR----TLGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAG-----SFEQLKVF 315 (388)
T ss_pred cCC----CHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCC-----CHHHHHHH
Confidence 222 344456677888999999999987763 44431 1247899998851 12334566
Q ss_pred HHHHhhhcceEeeeccc-CC----CCCCCCCCCC--CCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 377 RGHLRVRFGVEVPIHYQ-AP----KDDGQPQAGA--RDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 377 ~~~L~~~~gI~v~~~~~-~~----~~~~~~~~~~--~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
.+.|. -+.+.+..+.. .. ....+..... ++..+..++.||+|++. ||++.+++.|++.++
T Consensus 316 ~~~l~-l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----E~~~dli~Dl~~al~ 382 (388)
T PRK08861 316 VKALA-LFSLAESLGGVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVGL----EDAQDLIADLDQAFA 382 (388)
T ss_pred HhcCC-cceEccCCCCCcceeeCCCcccccccCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHH
Confidence 66663 34444433211 10 0000000000 01225567899999985 445555555555554
No 172
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.93 E-value=3.9e-24 Score=210.28 Aligned_cols=312 Identities=13% Similarity=0.171 Sum_probs=212.0
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|++...+..+++++.+++++|.+ ..++++||++|+..++.++ +++||+|+++.+.|.+....+..++..
T Consensus 55 y~r~~~pt~~~Le~~lA~l~G~~---~al~~~sG~~Ai~~~l~al--------~~~Gd~Vv~~~~~y~~~~~~~~~~~~~ 123 (386)
T PRK06767 55 YSRLGNPTVKLFEERMAVLEGGE---EALAFGSGMAAISATLIGF--------LKAGDHIICSNGLYGCTYGFLEVLEEK 123 (386)
T ss_pred ccCCCCcchHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHH--------hCCCCEEEEcCCcHHHHHHHHHHHHhh
Confidence 44434566899999999999984 4566677788999888876 589999999999999887777776677
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|+++..++. .+ ++++++++ .+++++|++++++||+|.+.|+++|.++|+++|+ ++++|++++.+
T Consensus 124 ~gi~~~~~~~----~d----~~~l~~~i------~~~tklV~lesp~NptG~v~dl~~I~~la~~~g~-~vivD~a~a~~ 188 (386)
T PRK06767 124 FMITHSFCDM----ET----EADIENKI------RPNTKLIFVETPINPTMKLIDLKQVIRVAKRNGL-LVIVDNTFCSP 188 (386)
T ss_pred cCeEEEEeCC----CC----HHHHHHhh------CcCceEEEEeCCCCCCceecCHHHHHHHHHHcCC-EEEEECCCccc
Confidence 7888777732 22 57888888 5689999999999999999999999999999999 79999999876
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHH
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVT 311 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 311 (452)
....++ ..++|+++.|++|+++|+.. .|+++.+++.+.+ +.... ....| +..+ ++ ....++.
T Consensus 189 ~~~~pl-~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~-~~~~~-~~~~g----------~~~~--~~-~a~l~~~ 252 (386)
T PRK06767 189 YLQRPL-ELGCDAVVHSATKYIGGHGDVVAGVTICKTRALAE-KIRPM-RKDIG----------GIMA--PF-DAWLLLR 252 (386)
T ss_pred ccCCch-hcCCcEEEecCcceecCCCCceeEEEEeChHHHHH-HHHHH-HHHhC----------CCCC--HH-HHHHHHc
Confidence 554333 34789999999998655443 4888888877654 11111 01111 1111 11 0111222
Q ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCcc--------cccceEEEEcCCccccCChhhHHHHHHHHhh
Q 012991 312 FVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPPE--------ICAAMVMVGLPSRLRVMGEDDALRLRGHLRV 382 (452)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 382 (452)
-+. .+....++.++++.++.+.|.+.++++ +..|.. ..++++.|.++. +..++.++.+.|.
T Consensus 253 ~L~----tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~-----~~~~~~~f~~~l~- 322 (386)
T PRK06767 253 GLK----TLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKG-----GKEETQAFINDLH- 322 (386)
T ss_pred CCC----cHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcC-----CHHHHHHHHHhCC-
Confidence 222 234455677899999999999998886 443321 236899998851 2346778999985
Q ss_pred hcceEeeecccCC-----CCCCCCCCC--CCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 383 RFGVEVPIHYQAP-----KDDGQPQAG--ARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 383 ~~gI~v~~~~~~~-----~~~~~~~~~--~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
.+++.+..+.... ....+.... .++..+..++.+|+|++. ||.+.+++.|.+.++
T Consensus 323 ~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl----E~~~dl~~dl~~al~ 384 (386)
T PRK06767 323 FITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGL----ESWEDIVSDLEQALK 384 (386)
T ss_pred ccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHh
Confidence 4688775543211 000010100 011235567899999984 566667777766653
No 173
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.93 E-value=9e-24 Score=211.30 Aligned_cols=343 Identities=15% Similarity=0.157 Sum_probs=234.7
Q ss_pred CCeEEeccCCCC--CCcHHHHH-HHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhC----CC-CCCcEEEecChhH
Q 012991 38 HGVARINNGSFG--SCPKSVLA-DQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLIN----AD-DVGEISLVDNATT 109 (452)
Q Consensus 38 ~~~~~l~~~~~~--~~p~~v~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~----~~-~~~~i~~t~g~t~ 109 (452)
...+.|..+.+. ..|..... .+...+... .......+...++...+|+.+++++. +. ++++|++|+|+++
T Consensus 89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~--~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~ 166 (459)
T COG1167 89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNY--GASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQ 166 (459)
T ss_pred CceecCCCCCCCcccCCHHHHHHHHHHHHhhc--chhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHH
Confidence 556777666543 34433333 233332211 11113345555777888888888764 32 3679999999999
Q ss_pred HHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCC
Q 012991 110 AAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGK 189 (452)
Q Consensus 110 a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~ 189 (452)
|+.+++..+ ++|||.|++.+|+|++....++. .|.++..+ |.|+++..++.|++.++. .
T Consensus 167 al~l~~~~l--------~~pGd~v~vE~PtY~~~~~~~~~----~g~~~~~v----p~d~~G~~~e~le~~~~~-----~ 225 (459)
T COG1167 167 ALDLLLRLL--------LDPGDTVLVEDPTYPGALQALEA----LGARVIPV----PVDEDGIDPEALEEALAQ-----W 225 (459)
T ss_pred HHHHHHHHh--------CCCCCEEEEcCCCcHHHHHHHHH----cCCcEEec----CCCCCCCCHHHHHHHHhh-----c
Confidence 999999977 58999999999999988777644 59999999 556666669999999963 4
Q ss_pred ceEEE-EEeccCCCCcccccHH---HHHHHHHHcCCCEEEEecccccCCc----c---ccccccCccEEEEcCcccCcCC
Q 012991 190 MIRLA-IIDHITSMPCVVIPVR---KLVKICRDEGVDQVFVDAAHAMGSI----K---IDVKEIGADFYVSNLHKWFFCP 258 (452)
Q Consensus 190 ~~~lv-~~~~~~n~tG~~~~l~---~i~~l~~~~~~~~~ivD~a~~~g~~----~---~~~~~~~~d~~~~s~~K~l~g~ 258 (452)
+++++ +.++.+||||..++.+ +|.++|++|++ ++|.|+.++.... + ......+-.+++.||||.+.-.
T Consensus 226 ~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~-~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~Pg 304 (459)
T COG1167 226 KPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDV-LIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLAPG 304 (459)
T ss_pred CCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCC-eEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhcccc
Confidence 67665 7778899999999976 79999999999 7999998764322 1 1122234568999999987666
Q ss_pred CCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHH--hhcCHHHHHHHHHHHHHHHHH
Q 012991 259 PSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSR--FEGGIDGIMQRNHEQALKMAR 336 (452)
Q Consensus 259 ~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~--~~~g~~~~~~~~~~~~~~l~~ 336 (452)
..+|++++++++++. +.... ......++...+.++. .++.+ +..-+..+++.+++.++.+.+
T Consensus 305 lRlG~vv~p~~~~~~-~~~~k------------~~~~~~~s~~~Q~~la---~~l~~G~~~~hl~~lR~~y~~rr~~l~~ 368 (459)
T COG1167 305 LRLGYVVAPPELIEK-LLRLK------------QAADLGPSSLSQAALA---AFLLSGHYDRHLRRLRREYARRRDALLE 368 (459)
T ss_pred cceeeeeCCHHHHHH-HHHHH------------HHhcCCCChHHHHHHH---HHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 669999999887776 21111 0001122222322222 22221 011256677778888888888
Q ss_pred HHHHHcC--CCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeee-cccCCCCCCCCCCCCCCCCCCcc
Q 012991 337 MLANAWG--TSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPI-HYQAPKDDGQPQAGARDKDGIIT 413 (452)
Q Consensus 337 ~L~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~-~~~~~~~~~~~~~~~~~~~~~~~ 413 (452)
.|.+..+ +.+..|.+ +.++|+.+| .+.+..++.+.+.++ |+.+.. +..+... ....
T Consensus 369 ~L~~~~~~~~~~~~p~g--G~flwl~l~------~~~~~~~l~~~a~~~-gv~i~~~g~~f~~~------------~~~~ 427 (459)
T COG1167 369 ALAEYLPELATWTRPEG--GLFLWLELP------EGIDARELLAAALEK-GVVVTPLGSAFSAD------------GDPR 427 (459)
T ss_pred HHHHhCCCCeeeecCCc--eEEEEEEcC------CCCCHHHHHHHHHHC-CCEEEcCCccccCC------------CCCC
Confidence 8988743 34445544 889999998 467888888888765 888855 5555332 1245
Q ss_pred ceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 414 GYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 414 ~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
+++|++++.. +.+++++.++.|.+++.+
T Consensus 428 ~~~Rl~~s~~-~~e~i~~gi~~l~~~~~~ 455 (459)
T COG1167 428 NGLRLSFSSP-SEEEIEEGIKRLAALLRE 455 (459)
T ss_pred CeEEEEcCCC-CHHHHHHHHHHHHHHHHH
Confidence 6999999874 588899999999888765
No 174
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.93 E-value=5.7e-24 Score=206.61 Aligned_cols=314 Identities=14% Similarity=0.142 Sum_probs=212.3
Q ss_pred hhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHH
Q 012991 73 FYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVT 152 (452)
Q Consensus 73 ~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~ 152 (452)
.|++...+..+.++++++++-|. +..++++||++|+..++.++ +++||+|+++...|.+....+..+.+
T Consensus 55 ~YsR~~nPt~~~le~~la~LEg~---~~a~~~~SGmaAi~~~~~~l--------l~~GD~Vv~~~~~Yg~t~~l~~~~l~ 123 (395)
T PRK08114 55 FYGRRGTLTHFSLQEAMCELEGG---AGCALYPCGAAAVANAILAF--------VEQGDHVLMTGTAYEPTQDFCSKILS 123 (395)
T ss_pred cccCCCChhHHHHHHHHHHHhCC---CeEEEEhHHHHHHHHHHHHH--------cCCCCEEEEeCCCcHHHHHHHHHHHH
Confidence 36666677789999999999887 46777888999999999877 58999999999999998888876678
Q ss_pred hcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcC--CCEEEEeccc
Q 012991 153 RAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEG--VDQVFVDAAH 230 (452)
Q Consensus 153 ~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~--~~~~ivD~a~ 230 (452)
+.|+++++++ ..+ .+.+++++ .++|++|++++++||+|.+.|+++|+++||++| + +++||+++
T Consensus 124 ~~Gi~v~~vd----~~d----~~~l~~~l------~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~-~lvVDnT~ 188 (395)
T PRK08114 124 KLGVTTTWFD----PLI----GADIAKLI------QPNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDA-VIMIDNTW 188 (395)
T ss_pred hcCcEEEEEC----CCC----HHHHHHhc------CCCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCC-EEEEECCC
Confidence 8899999984 222 47788888 578999999999999999999999999999984 9 89999999
Q ss_pred ccCCccccccccCccEEEEcCcccCcCCC--CcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHH
Q 012991 231 AMGSIKIDVKEIGADFYVSNLHKWFFCPP--SVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPS 308 (452)
Q Consensus 231 ~~g~~~~~~~~~~~d~~~~s~~K~l~g~~--G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (452)
+.|.. .+...+|+|+++.|.+||++|+. +.|+++.+++..+. +. .. .. ..|. ..+...
T Consensus 189 a~p~~-~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~-l~-~~-~~-----------~~G~-----~~~p~~ 248 (395)
T PRK08114 189 AAGVL-FKALDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQ-LR-EN-SY-----------LMGQ-----MVDADT 248 (395)
T ss_pred ccccc-cCHHHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHH-HH-HH-HH-----------hccC-----CCCHHH
Confidence 99877 88888999999999999988874 46777766654332 10 00 00 0121 111122
Q ss_pred HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc--------------ccccceEEEEcCCccccCChhhH
Q 012991 309 AVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP--------------EICAAMVMVGLPSRLRVMGEDDA 373 (452)
Q Consensus 309 al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~ 373 (452)
+...++.+ +.+.--.++..+++..+.++|++.|.++ |+.|. ...++++.|.+.... +....
T Consensus 249 a~l~~rgl-~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~---~~~~~ 324 (395)
T PRK08114 249 AYMTSRGL-RTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKL---TDEQL 324 (395)
T ss_pred HHHHHcCC-CcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcc---cHHHH
Confidence 22222211 1344456677889999999999987663 44441 134789999885100 02234
Q ss_pred HHHHHHHhhhcceEeeecccCC-CC--CCCCCCC--CCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 374 LRLRGHLRVRFGVEVPIHYQAP-KD--DGQPQAG--ARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 374 ~~l~~~L~~~~gI~v~~~~~~~-~~--~~~~~~~--~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
.++.+.|. -+.+.+..+.... -. ....... ..+.....++.||+|++. ||++.+++.|++.++
T Consensus 325 ~~f~~~l~-l~~~a~SlGg~~SLi~~~~~~~~~~~~~~~~~~~~~~liRlSvGl----Ed~~DLi~Dl~~Al~ 392 (395)
T PRK08114 325 ANYLDNFS-LFSMAYSWGGFESLILANQPEEIAAIRPAGEVDFTGTLIRLHIGL----EDVDDLIADLAAGFA 392 (395)
T ss_pred HHHHHhCC-cceeecccCCccceeccCCchhhhccCChhHhcCCCCeEEEEecc----CCHHHHHHHHHHHHH
Confidence 55666663 2344443322110 00 0000000 000112345899999984 556666666666554
No 175
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.93 E-value=7.4e-24 Score=207.41 Aligned_cols=310 Identities=14% Similarity=0.154 Sum_probs=211.2
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|++...+..+++++.+++++|.+ .++++++|+.|+.+++. + +++||+|+++++.|.++...+..++.+
T Consensus 41 Y~r~~~p~~~~le~~la~l~g~~---~~l~~~sG~~al~~~l~-l--------l~~Gd~Vl~~~~~y~~~~~~~~~~~~~ 108 (378)
T TIGR01329 41 YTRSGNPTRTALESLLAKLDKAD---RAFAFSSGMAALDVITR-L--------LNNGDEIIAGDDLYGGTDRLLTQVVPR 108 (378)
T ss_pred cCCCCChHHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHH-H--------hCCCCEEEEcCCCchHHHHHHHHHHHH
Confidence 33333455789999999999984 56677777888887665 3 489999999999999988888777788
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|++++.++. .+ ++++++++ .+++++|++++++||+|.+.|+++|+++|+++|+ ++++|++++.+
T Consensus 109 ~G~~v~~vd~----~d----~~~le~~i------~~~tklv~le~psnptg~v~dl~~I~~la~~~g~-~vivD~a~~~~ 173 (378)
T TIGR01329 109 SGVVVVHVDT----TD----LDKVKAAL------GPKTKLVLLESPTNPLQKIVDIRKISEMAHAQNA-LVVVDNTMMSP 173 (378)
T ss_pred cCcEEEEeCC----CC----HHHHHHhc------CcCceEEEEECCCCCCCeeecHHHHHHHHHHcCC-EEEEECCCccc
Confidence 8999999943 22 67888888 5789999999999999999999999999999999 89999999777
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEEecCcc-ccCCCCCceeccCCCCcccccccccccCccccccHHHHH
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRKSIL-SSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAV 310 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 310 (452)
.....+ .+++|++++|++||++|+.+ .|+++++++.. ++ + .+... .. |.... +. .....+
T Consensus 174 ~~~~~l-~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~-~-~~~~~-~~-----------G~~~~-~~-~a~l~~ 236 (378)
T TIGR01329 174 LLCNPL-ELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKK-V-YFLQN-ST-----------GSGLA-PF-DCWLLL 236 (378)
T ss_pred ccCChh-hcCCcEEEEecceeccCCccceeEEEEeCcHHHHHH-H-HHHHH-hc-----------CCcCC-HH-HHHHHH
Confidence 543333 45899999999999888876 78888866544 32 1 11100 00 11100 10 011111
Q ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc--------------ccccceEEEEcCCccccCChhhHHH
Q 012991 311 TFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP--------------EICAAMVMVGLPSRLRVMGEDDALR 375 (452)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (452)
.-++ .+....++..+++..+.+.|.+.+.+. +..|. ...++++.|.+. +...+.+
T Consensus 237 ~~l~----tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~------~~~~~~~ 306 (378)
T TIGR01329 237 RGIK----TLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETG------SVALSKR 306 (378)
T ss_pred ccCC----CHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEEC------CHHHHHH
Confidence 1111 355556777888888888898876542 22221 134688999883 2234778
Q ss_pred HHHHHhhhcceEeeecccCC-----CCCCCCCCCC--CCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 376 LRGHLRVRFGVEVPIHYQAP-----KDDGQPQAGA--RDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 376 l~~~L~~~~gI~v~~~~~~~-----~~~~~~~~~~--~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
+.+.| +.++|.++.+.... ....+..... +++.+..++.+|+|++ .||++.+++.|++.++.
T Consensus 307 ~~~~L-~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG----lE~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 307 LVEAT-KLFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVG----IEDVDDLISDLDIAFVT 375 (378)
T ss_pred HHHhC-cCcccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHHh
Confidence 99999 45788876543210 0000101000 1122456789999998 46677777777777653
No 176
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.93 E-value=3.9e-23 Score=219.66 Aligned_cols=350 Identities=19% Similarity=0.181 Sum_probs=247.6
Q ss_pred CCCHHHHHhhhccC---CCC-eEEeccCCCC-CCcHHHHHHHHHHHHHHhc-CCchh-hhhhhhHHHHHHHHHHHhHhCC
Q 012991 23 CISEAEIRDEFSHH---QHG-VARINNGSFG-SCPKSVLADQQKWQLKFLQ-QPDDF-YFNSLRKGILESRAAVKDLINA 95 (452)
Q Consensus 23 ~~~~~~ir~~~~~~---~~~-~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~la~~~~~ 95 (452)
.++..++.++|..+ +.. .-|++.|..+ ..|+.+.+.+.+.-..+.. .|-.. -+.+..+.+.+.++.+++++|.
T Consensus 57 ~~sE~e~~~~~~~la~~N~~~~~~ig~G~y~~~~P~vi~~~i~~~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~ 136 (954)
T PRK05367 57 ALSEAEALAELRAIASKNKVFRSYIGQGYYGTHTPPVILRNILENPAWYTAYTPYQPEISQGRLEALLNFQTMVADLTGL 136 (954)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCcccCCCCCCCcCcHHHHHHHHhCcchhhccCCCChHHHHHHHHHHHHHHHHHHHHHCC
Confidence 46666666665432 222 2356777766 5666554655443221111 11110 2345566788899999999999
Q ss_pred CCCCcEEEecChhHHHHHHHHHhhcccccCCCCC--CCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH
Q 012991 96 DDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHR--NDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI 173 (452)
Q Consensus 96 ~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~--g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 173 (452)
+ .+++.++.++|++.+.++.++. .++ +++|++++.+|+++...|..+++..|++++.++. +++
T Consensus 137 ~-~anaSl~d~aTAa~ea~~~a~~-------~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~----~~d--- 201 (954)
T PRK05367 137 E-IANASLLDEATAAAEAMALAKR-------VSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDA----AKA--- 201 (954)
T ss_pred C-hhhccccccHHHHHHHHHHhhh-------hccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecC----ccC---
Confidence 6 8899999999999998888763 344 4899999999999999998888999999999953 211
Q ss_pred HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcc
Q 012991 174 INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHK 253 (452)
Q Consensus 174 ~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K 253 (452)
++ ..++..+++.. .|.+|.+.|+++|+++||++|+ ++++|+.+..+....+...+|+|++++++||
T Consensus 202 -------~~-----~~~~~~vlvq~-p~~~G~i~d~~~i~~~ah~~Ga-l~~vda~~~Al~~l~~pge~GaDi~vgs~qk 267 (954)
T PRK05367 202 -------LD-----HDDVFGVLLQY-PGTSGEVRDYTALIAAAHARGA-LVAVAADLLALTLLTPPGEMGADIAVGSAQR 267 (954)
T ss_pred -------CC-----cccEEEEEEec-CCCCeeeccHHHHHHHHHHcCC-EEEEEehhhhccCCCChhhcCCCEEEeeCcc
Confidence 11 23566666665 4679999999999999999999 8999997755444457788899999999999
Q ss_pred c-----CcCCCCcEEEEEecCccccCCCCCceecc---CCCC-cc--------cccccccccCccccccHHHHH-----H
Q 012991 254 W-----FFCPPSVAFLYCRKSILSSDMHHPVVSHE---FGNG-LP--------IESAWIGTRDYSAQLVIPSAV-----T 311 (452)
Q Consensus 254 ~-----l~g~~G~G~l~~~~~~~~~~l~~~~~~~~---~~~~-~~--------~~~~~~~~~~~~~~~~~~~al-----~ 311 (452)
| ++|| |+|++++++++.+. +-.+...+. .|.. .. ..+.+.++.|+....++.+.+ .
T Consensus 268 fg~P~g~GGP-~aGflavr~~~~r~-lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~ 345 (954)
T PRK05367 268 FGVPMGFGGP-HAAYFAVRDAYKRS-MPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAV 345 (954)
T ss_pred cCCCCCCCCC-CEEEEEECHHHHhh-CCCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHH
Confidence 8 3344 59999999988776 322333221 1111 11 113456787887655555444 3
Q ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeec
Q 012991 312 FVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIH 391 (452)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~ 391 (452)
++... |++++.+++..+++++.+.|.. .|+++..+.. ...+.+.++ .++.++.+.|.++ ||.++.
T Consensus 346 ~~g~~--Gl~~Ia~~~~~la~~l~~~L~~-~G~~~~~~~~--f~~~~~~~~--------~~~~~i~~~l~~~-gi~~~~- 410 (954)
T PRK05367 346 YHGPE--GLKAIARRVHRLAAILAAGLRA-LGLEVVHDSF--FDTLTVEVG--------GDAAAVLARALAA-GINLRR- 410 (954)
T ss_pred HHhhh--hHHHHHHHHHHHHHHHHHHHHh-cCcccCCCCC--CCeEEEeCC--------CCHHHHHHHHHHC-Cceecc-
Confidence 34544 9999999999999999999977 4887765432 345555542 2677899999775 999842
Q ss_pred ccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHH
Q 012991 392 YQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVI 437 (452)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~ 437 (452)
..++.+|+|++.++|++||+++++++.
T Consensus 411 -------------------~~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 411 -------------------VDDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred -------------------ccCCEEEEEecccCCHHHHHHHHHHHc
Confidence 224579999999999999999999997
No 177
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.93 E-value=2.6e-23 Score=207.77 Aligned_cols=362 Identities=13% Similarity=0.083 Sum_probs=236.9
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHHhc--CCch-hhh--hhhhHHHHHHHHHHHhHhCCCCCCcEEE---ecChhH
Q 012991 38 HGVARINNGSFGSCPKSVLADQQKWQLKFLQ--QPDD-FYF--NSLRKGILESRAAVKDLINADDVGEISL---VDNATT 109 (452)
Q Consensus 38 ~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~--~~~~-~~~--~~~~~~~~~~~~~la~~~~~~~~~~i~~---t~g~t~ 109 (452)
+..+.|- ++-...++.|++++...+..-++ .|+. +++ ...+++.+.++++.+++|+.. .+.+++ +.+|+.
T Consensus 34 ~~~l~li-asen~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~-~~~~~~nv~~~SG~~ 111 (475)
T PLN03226 34 WKGLELI-ASENFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLD-PEKWGVNVQPLSGSP 111 (475)
T ss_pred HcCeeEe-cCCccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCC-cceeEEecCcCchHH
Confidence 4555665 45667777799999888743222 2222 221 223445555777889999986 444433 478999
Q ss_pred HHHHHHHHhhcccccCCCCCCCEEEEeCC---cchhHHHHHHHH-HHhcCcEEEEEeCCCCCC-ChHHH-HHHHHHHHhc
Q 012991 110 AAAIVLQQIGRGFTEGRFHRNDTVLMLHC---AFQAVKKSIQAY-VTRAGGSVVEVQLPFPLA-SEEEI-INEFKKGIEK 183 (452)
Q Consensus 110 a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~---~~~s~~~~~~~~-a~~~g~~v~~~~~~~~~~-~~~~~-~~~l~~~i~~ 183 (452)
|+..++.++ +++||+|+..+. .|.++....... ....+..+..++. ..+ +.+.+ +++|++.+++
T Consensus 112 AN~av~~aL--------~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y--~~~~~~g~iD~d~Le~~l~~ 181 (475)
T PLN03226 112 ANFAVYTAL--------LQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPY--RLDESTGLIDYDKLEKKAML 181 (475)
T ss_pred HHHHHHHHh--------CCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeee--eecCCCCCcCHHHHHHHHhh
Confidence 999999987 589999998543 343321111000 0111222222222 333 33455 8999998853
Q ss_pred cccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccc---cCccEEEEcCcccCcCCCC
Q 012991 184 GKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKE---IGADFYVSNLHKWFFCPPS 260 (452)
Q Consensus 184 ~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~---~~~d~~~~s~~K~l~g~~G 260 (452)
.++++|++. .+.+|...|+++|.++|+++|+ ++++|++|++|.+..+... .++|++++++||||.||.|
T Consensus 182 -----~~pklIv~~--~S~~s~~~D~a~i~~ia~~~ga-~LlvD~AH~~Gli~~~~~~~p~~~~Div~~t~hK~L~GP~G 253 (475)
T PLN03226 182 -----FRPKLIIAG--ASAYPRDWDYARMRKIADKVGA-LLMCDMAHISGLVAAQEAASPFEYCDVVTTTTHKSLRGPRG 253 (475)
T ss_pred -----cCCeEEEEe--cCcCCCccCHHHHHHHHHHcCC-EEEEEchhhhCcccCCCCCCCCCCCeEEEecCcccccCCCc
Confidence 467777663 2347889999999999999999 8999999999987655332 2689999999999999999
Q ss_pred cEEEEEecCccccCCCCCceec-cC--CCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Q 012991 261 VAFLYCRKSILSSDMHHPVVSH-EF--GNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARM 337 (452)
Q Consensus 261 ~G~l~~~~~~~~~~l~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~ 337 (452)
|+++++++.... +....... ++ -........+.++++...++++.++++++... +++.+++++.+++++|.+.
T Consensus 254 -g~I~~~~~~~~~-~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~--~~~~~~~~~~~na~~L~~~ 329 (475)
T PLN03226 254 -GMIFFRKGPKPP-KGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTP--EFKAYQKQVKANAAALANR 329 (475)
T ss_pred -eEEEEchhhccc-ccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCc--CHHHHHHHHHHHHHHHHHH
Confidence 888888765532 10000000 00 00000001123567777888899999998865 8899999999999999999
Q ss_pred HHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEE
Q 012991 338 LANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYAR 417 (452)
Q Consensus 338 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iR 417 (452)
|.+. |+.+..+... .+++++.+.. .+.+..++.+.|.+ .||.+.....|.... ...+..+|
T Consensus 330 L~~~-G~~l~~~~t~-~hi~lv~~~~-----~gi~~~~~~~~L~~-~~I~~nk~~~p~~~~-----------~~~~~giR 390 (475)
T PLN03226 330 LMSK-GYKLVTGGTD-NHLVLWDLRP-----LGLTGSRVEKVLDL-AHITLNKNAVPGDSS-----------ALVPGGVR 390 (475)
T ss_pred HHhC-CCEEEcCCCC-CCEEEEEccC-----CCCCHHHHHHHHHH-CCCEECCCCCCCCcc-----------cCCCCCcc
Confidence 9885 8887764322 4677676621 35677788888865 599986543221100 23456799
Q ss_pred eccc----ccCCHHHHHHHHHHHHHHHhc
Q 012991 418 ISHQ----VYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 418 is~~----~~~t~~di~~l~~~l~~~~~~ 442 (452)
++.. ...+++|++++++.|.++++.
T Consensus 391 iGt~~lt~~g~~~~d~~~ia~~i~~~~~~ 419 (475)
T PLN03226 391 IGTPAMTSRGLVEKDFEKVAEFLHRAVTI 419 (475)
T ss_pred cCcHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 8543 334689999999999999973
No 178
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.93 E-value=7.1e-24 Score=210.15 Aligned_cols=347 Identities=15% Similarity=0.131 Sum_probs=218.0
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHH-HHHhc-CCchhhhhhhhHHHHHHHH----HHHhHhCCCCCCcEEEecChhHHH
Q 012991 38 HGVARINNGSFGSCPKSVLADQQKWQ-LKFLQ-QPDDFYFNSLRKGILESRA----AVKDLINADDVGEISLVDNATTAA 111 (452)
Q Consensus 38 ~~~~~l~~~~~~~~p~~v~e~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~----~la~~~~~~~~~~i~~t~g~t~a~ 111 (452)
+..++|- ++....++.|++++...+ ..+.. .+.+.+-.+ .+..+++++ .+++++|.+ ..+++++||+.|+
T Consensus 28 ~~~~~l~-~sen~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G-~~~~~~lE~~~~~~la~l~g~~--~alv~~~SG~~A~ 103 (416)
T PRK13034 28 QDHLELI-ASENFTSPAVMEAQGSVLTNKYAEGYPGKRYYGG-CEFVDEVEALAIERAKQLFGCD--YANVQPHSGSQAN 103 (416)
T ss_pred hcCeeec-ccccCCCHHHHHHhcchhhcCCCCCCCCCcccCC-ChHHHHHHHHHHHHHHHHhCCC--ceEEecCCcHHHH
Confidence 4555554 334455777999998875 43311 111111111 244455555 999999995 4446678999999
Q ss_pred HHHHHHhhcccccCCCCCCCEEEEeCCcchhHHH-HHHHHHHhcCcEE--EEEeCCCCCCC-hHHH-HHHHHHHHhcccc
Q 012991 112 AIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKK-SIQAYVTRAGGSV--VEVQLPFPLAS-EEEI-INEFKKGIEKGKK 186 (452)
Q Consensus 112 ~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~-~~~~~a~~~g~~v--~~~~~~~~~~~-~~~~-~~~l~~~i~~~~~ 186 (452)
..++.++ +++||+|++++..|.+... +... ...+... ..+ +.+. ...+ ++++++.++.
T Consensus 104 ~~~l~al--------~~~GD~Vl~~~~~~~~~~~~g~~~--~~~~~~~~~~~~----~~~~~~~~~d~~~le~~l~~--- 166 (416)
T PRK13034 104 GAVYLAL--------LKPGDTILGMSLSHGGHLTHGAKV--SLSGKWYNAVQY----GVDRLTGLIDYDEVEELAKE--- 166 (416)
T ss_pred HHHHHHh--------cCCCCEEEEcCccceeeeecCCcc--eeccceeeeEEc----ccccccCCcCHHHHHHHHhh---
Confidence 9999987 5899999999999977311 1100 0011111 222 2211 1223 7888888852
Q ss_pred CCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccc---cCccEEEEcCcccCcCCCCcEE
Q 012991 187 DGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKE---IGADFYVSNLHKWFFCPPSVAF 263 (452)
Q Consensus 187 ~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~---~~~d~~~~s~~K~l~g~~G~G~ 263 (452)
.++++|+++++ .+|...|+++|.++|+++|+ ++++|++|++|....+... .++|++++|+|||+.|+.| |+
T Consensus 167 --~~~klVi~~~~--~~g~~~dl~~l~~la~~~g~-~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l~g~~G-G~ 240 (416)
T PRK13034 167 --HKPKLIIAGFS--AYPRELDFARFREIADEVGA-LLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTLRGPRG-GM 240 (416)
T ss_pred --cCCeEEEECCC--ccccccCHHHHHHHHHHcCC-EEEEeCcccccCcccCCCCCCCCCceEEEEeCcccCCCCCC-eE
Confidence 35788887654 36888899999999999999 8999999998876443211 2589999999999888887 77
Q ss_pred EEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcC
Q 012991 264 LYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWG 343 (452)
Q Consensus 264 l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~ 343 (452)
++++++.+.. ...... +.+ +.+.+......++..++....+. +...++++++++++++++.|.++ |
T Consensus 241 v~~~~~~~~~-~~~~~~---~~~-------~~~~~~~~~~aa~~~al~~~~~~--~~~~~~~~l~~~a~~l~~~L~~~-G 306 (416)
T PRK13034 241 ILTNDEEIAK-KINSAV---FPG-------LQGGPLMHVIAAKAVAFGEALQP--EFKTYAKQVIANAQALAEVLKER-G 306 (416)
T ss_pred EEECcHHHHH-HHHhhc---CCc-------ccCCccHHHHHHHHHHHHHHhCh--hHHHHHHHHHHHHHHHHHHHHHc-C
Confidence 7776554433 111110 000 00122222333333333333221 44567889999999999999887 8
Q ss_pred CCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccc-
Q 012991 344 TSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQV- 422 (452)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~- 422 (452)
+.+..+. ..++++.+.+.+ .+.+...+.+.|.+ .||.+.....+.... ....+..+|++++.
T Consensus 307 ~~~~~~~-~~t~i~~v~~~~-----~~~~~~~~~~~L~~-~GI~v~~~~~p~~~~----------~p~~~~~lR~~~~~~ 369 (416)
T PRK13034 307 YDLVSGG-TDNHLLLVDLRP-----KGLSGKDAEQALER-AGITVNKNTVPGDTE----------SPFVTSGIRIGTPAG 369 (416)
T ss_pred CEeccCC-CCCcEEEEEcCC-----CCCCHHHHHHHHHh-CCcEEeccCCCCCCc----------CCCCCCeeEeCcHHH
Confidence 8765431 125666666541 23455667788865 599986422211000 01224679999887
Q ss_pred ---cCCHHHHHHHHHHHHHHHhc
Q 012991 423 ---YNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 423 ---~~t~~di~~l~~~l~~~~~~ 442 (452)
.++++||++++++|++++..
T Consensus 370 t~~~~~~~di~~l~~~l~~~~~~ 392 (416)
T PRK13034 370 TTRGFGEAEFREIANWILDVLDD 392 (416)
T ss_pred HhCCCCHHHHHHHHHHHHHHHhc
Confidence 55699999999999999874
No 179
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=1.1e-23 Score=206.36 Aligned_cols=312 Identities=15% Similarity=0.164 Sum_probs=207.3
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|++...+..+.++++++++.|.+ .+++++||++|+..++.++ +++||+|+++++.|++.+..+..++..
T Consensus 46 Y~R~~~pt~~~L~~~lA~l~g~~---~~i~~~sg~~Ai~~~l~~l--------~~~GD~Vl~~~~~y~~~~~~~~~~~~~ 114 (386)
T PRK08045 46 YSRRGNPTRDVVQRALAELEGGA---GAVLTNTGMSAIHLVTTVF--------LKPGDLLVAPHDCYGGSYRLFDSLAKR 114 (386)
T ss_pred eeCCCCccHHHHHHHHHHHhCCC---eEEEECCHHHHHHHHHHHH--------cCCCCEEEEcCCCcHHHHHHHHHHHhh
Confidence 44555667899999999999963 6999999999999999876 589999999999999887777766666
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.+.++..++ ..+ .+++++++ .+++++|++++++||||.+.|+++|.++|+++|+ ++++|++++.+
T Consensus 115 ~gi~v~~vd----~~d----~e~l~~~l------~~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~-~vivDeay~~~ 179 (386)
T PRK08045 115 GCYRVLFVD----QGD----EQALRAAL------AEKPKLVLVESPSNPLLRVVDIAKICHLAREAGA-VSVVDNTFLSP 179 (386)
T ss_pred CCeEEEEeC----CCC----HHHHHHhc------ccCCeEEEEECCCCCCCEecCHHHHHHHHHHcCC-EEEEECCCCcc
Confidence 677777763 111 67788888 5689999999999999999999999999999999 89999999877
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEEe-cCccccCCCCCceeccCCCCcccccccccccCccccccHHHHH
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCR-KSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAV 310 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 310 (452)
...... ..++|+++.|++||++|+.+ .|+++.+ +++.+. +. ......| ...+. .....++
T Consensus 180 ~~~~pl-~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~-l~--~~~~~~g----------~~~~p---~~~~l~~ 242 (386)
T PRK08045 180 ALQNPL-ALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTE-LA--WWANNIG----------VTGGA---FDSYLLL 242 (386)
T ss_pred ccCCch-hhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHH-HH--HHHHhcC----------CCCCH---HHHHHHH
Confidence 543222 45789999999999887776 5766664 333332 10 0000000 11111 1112222
Q ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc--------------ccccceEEEEcCCccccCChhhHHH
Q 012991 311 TFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP--------------EICAAMVMVGLPSRLRVMGEDDALR 375 (452)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (452)
+-++ .+...+++..+++..+.+.|++.|.++ |..|. ...++++.|.++. +.....+
T Consensus 243 rgl~----tl~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~-----~~~~~~~ 313 (386)
T PRK08045 243 RGLR----TLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG-----DEQTLRR 313 (386)
T ss_pred hhhc----cHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecC-----cHHHHHH
Confidence 3333 345556778889999999999887663 43331 1347899998851 1233456
Q ss_pred HHHHHhhhcceEeeecccC-----CCCCCCCCCCC--CCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 376 LRGHLRVRFGVEVPIHYQA-----PKDDGQPQAGA--RDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 376 l~~~L~~~~gI~v~~~~~~-----~~~~~~~~~~~--~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
+.+.|. -+.+.+..+... +....+..... +...+..++.+|+|++. ||++.+++.|++.++.
T Consensus 314 f~~~l~-~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~ 382 (386)
T PRK08045 314 FLGGLS-LFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGI----EDGEDLIADLENGFRA 382 (386)
T ss_pred HHHhcc-ceeEeccCCCCceeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHHH
Confidence 777773 334444322111 00000000000 11235567899999985 4566666666666554
No 180
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.93 E-value=1.5e-23 Score=206.44 Aligned_cols=347 Identities=15% Similarity=0.189 Sum_probs=220.1
Q ss_pred hhccCCCCeEEeccCCCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHH
Q 012991 32 EFSHHQHGVARINNGSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAA 111 (452)
Q Consensus 32 ~~~~~~~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~ 111 (452)
.|+.. .+.||++.+...+.+..+.+.... ......+.+...+...++++.+++++|++ ...++++|+.|+
T Consensus 24 ~~~~~-~~pi~~~~~~~~~~~~~~~~~~~~------~~~~~~y~r~~~p~~~~Le~~lA~l~G~~---~~~~~~sG~~Ai 93 (398)
T PRK07504 24 QFGET-SEALFLTQGFVYDTAEAAEARFKG------EDPGFIYSRYSNPTVDMFEKRMCALEGAE---DARATASGMAAV 93 (398)
T ss_pred CCCCC-cCCeECCCCccCCCHHHHHHHhcc------CcCCceeecCCCchHHHHHHHHHHHhCCC---eeeEecCHHHHH
Confidence 35433 346899988777766654432211 01111233334556789999999999995 334578889999
Q ss_pred HHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCce
Q 012991 112 AIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMI 191 (452)
Q Consensus 112 ~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~ 191 (452)
..++.++ +++||+|+++.+.|.+....+...+...|++++.++ ..+ ++++++++ .++|
T Consensus 94 ~~~l~~~--------l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd----~~d----~e~l~~ai------~~~t 151 (398)
T PRK07504 94 TAAILCQ--------VKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVD----GLD----LDNWEKAV------RPNT 151 (398)
T ss_pred HHHHHHH--------hCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEEC----CCC----HHHHHHhc------CcCc
Confidence 8777654 589999999999999887777666677899999883 111 68888888 5789
Q ss_pred EEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCC-Cc-EEEEEecC
Q 012991 192 RLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPP-SV-AFLYCRKS 269 (452)
Q Consensus 192 ~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~-G~-G~l~~~~~ 269 (452)
++|++++++||+|.+.|+++|.++|+++|+ ++++|++++.+.... ....++|+++.|++|+++|+. .. |+++.+++
T Consensus 152 klV~lesp~NptG~v~dl~~I~~la~~~gi-~lvvD~a~a~~~~~~-~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~ 229 (398)
T PRK07504 152 KVFFLESPTNPTLEVIDIAAVAKIANQAGA-KLVVDNVFATPLFQK-PLELGAHIVVYSATKHIDGQGRCLGGVVLSDKA 229 (398)
T ss_pred eEEEEECCCCCCcEecCHHHHHHHHHHcCC-EEEEECCccccccCC-chhhCCCEEEeeccccccCCccceEEEEEeCcH
Confidence 999999999999999999999999999999 799999998765432 224579999999999865532 14 56666666
Q ss_pred ccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCC
Q 012991 270 ILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGS 348 (452)
Q Consensus 270 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~ 348 (452)
.+.+.+ ..... ..|. ..+......++.-++ .+....++..+++..+.+.|.+.+++. |..
T Consensus 230 ~i~~~~-~~~~~------------~~g~--~~s~~~A~~~l~~L~----tl~~R~~~~~~na~~la~~L~~~p~v~~v~y 290 (398)
T PRK07504 230 WIEEHL-QDYFR------------HTGP--SLSPFNAWTLLKGLE----TLPVRVRQQTESAAAIADFLAGHPKVARVIY 290 (398)
T ss_pred HHHHHH-HHHHH------------HhCC--CCCHHHHHHHHhccc----hHHHHHHHHHHHHHHHHHHHHcCCCccEEEC
Confidence 554201 00000 0011 111112222333333 244456666788999999999887763 333
Q ss_pred Cc---c-----------cccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccC-----CCCCCCCCCC--CCC
Q 012991 349 PP---E-----------ICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQA-----PKDDGQPQAG--ARD 407 (452)
Q Consensus 349 ~~---~-----------~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~-----~~~~~~~~~~--~~~ 407 (452)
|. + ..++++.|.+.. +...+.++.+.|. -+.+.+..+... +....+.... .++
T Consensus 291 p~l~~~~~~~~~~~~~~g~g~~~s~~~~~-----~~~~~~~~~~~l~-~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~ 364 (398)
T PRK07504 291 PGRADHPQADIIAKQMTGGSTLVAFELKG-----GKEAAFRFLNALK-IVRISNNLGDAKSLITHPATTTHKNLSPEARA 364 (398)
T ss_pred CCCCCCccHHHHHHhCCCCccEEEEEeCC-----CHHHHHHHHHhCC-cceecccCCCCCeeeeCCCCCCcccCCHHHHH
Confidence 31 1 237899998851 1234556777763 344444322110 0000000000 011
Q ss_pred CCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 408 KDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 408 ~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
..+..++.+|+|++. ||.+.+++.|+..++
T Consensus 365 ~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 394 (398)
T PRK07504 365 ELGISEGFLRLSAGL----EDTDDLIEDLAAALK 394 (398)
T ss_pred hcCCCCCeEEEEecc----CCHHHHHHHHHHHHH
Confidence 235667899999985 455566666665554
No 181
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.93 E-value=7e-23 Score=201.63 Aligned_cols=343 Identities=12% Similarity=0.101 Sum_probs=212.5
Q ss_pred cHHHHHHHHHHHHHHhcCCch-hhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCC
Q 012991 52 PKSVLADQQKWQLKFLQQPDD-FYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRN 130 (452)
Q Consensus 52 p~~v~e~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g 130 (452)
.+.+.++..+.+..+...... ...++......++++++++++|.+ +.+++++|.+ ++..++.++ +++|
T Consensus 14 ~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e--~al~~~sG~~-a~~~~i~~l--------~~~G 82 (392)
T PLN03227 14 SPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTE--SAILYSDGAS-TTSSTVAAF--------AKRG 82 (392)
T ss_pred CHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCCC--cEEEecCcHH-HHHHHHHHh--------CCCC
Confidence 344888887777665332222 112455568899999999999995 5666666655 445666665 5899
Q ss_pred CEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhcc-----ccCCCceEEEEEeccCCCCcc
Q 012991 131 DTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKG-----KKDGKMIRLAIIDHITSMPCV 205 (452)
Q Consensus 131 ~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~-----~~~~~~~~lv~~~~~~n~tG~ 205 (452)
|+|++++..|.+....+.. .+.+++.+ +.++... .+.+.+.++.. ...++++++|+++.++|++|.
T Consensus 83 D~Vl~~~~~h~s~~~~~~l----~~~~~~~~----~~~d~~~-l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~ 153 (392)
T PLN03227 83 DLLVVDRGVNEALLVGVSL----SRANVRWF----RHNDMKD-LRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGT 153 (392)
T ss_pred CEEEEeccccHHHHHHHHH----cCCeEEEe----CCCCHHH-HHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCc
Confidence 9999999999998776632 35677777 3333211 23333333210 001246899999999999999
Q ss_pred cccHHHHHHHHHHcCCCEEEEecccccCCccc---------ccc-ccCccEEEEcCcccCcCCCCcEEEEEecCccccCC
Q 012991 206 VIPVRKLVKICRDEGVDQVFVDAAHAMGSIKI---------DVK-EIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDM 275 (452)
Q Consensus 206 ~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~---------~~~-~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l 275 (452)
+.|+++|.++|++||+ ++|+|++|++|.... ++. ..++|++++|++|+ .|+.| |++++++++++. +
T Consensus 154 i~~l~~i~~l~~~~g~-~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~-~g~~g-g~v~~~~~~~~~-~ 229 (392)
T PLN03227 154 LAPLKELVALKEEFHY-RLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENA-FGSVG-GMTVGSEEVVDH-Q 229 (392)
T ss_pred ccCHHHHHHHHHHcCC-EEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhh-hhccC-cEEecCHHHHHH-H
Confidence 9999999999999999 899999998664321 121 23569999999997 66775 777777776643 1
Q ss_pred CCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCC------
Q 012991 276 HHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSP------ 349 (452)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~------ 349 (452)
... +. ...+.++.+.....+..+++....+ .+.++++++++.+++++.|.+. +......
T Consensus 230 -~~~-----~~----~~~~~~~~~p~~~~aa~~al~~~~~----~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~rg~~~ 294 (392)
T PLN03227 230 -RLS-----GS----GYCFSASAPPFLAKADATATAGELA----GPQLLNRLHDSIANLYSTLTNS-SHPYALKLRNRLV 294 (392)
T ss_pred -HHh-----Cc----CccccCCCCHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHHhc-CCccccccccccc
Confidence 111 00 0011122111112222223333221 3567888899999999999763 3321100
Q ss_pred --cccccceEEEEcCCccccC---ChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccC
Q 012991 350 --PEICAAMVMVGLPSRLRVM---GEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYN 424 (452)
Q Consensus 350 --~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~ 424 (452)
....++++.+.+.+..... +.....++.+.+.++ |+.+......+.. .+ -...+..+|++++..+
T Consensus 295 ~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gi~~~~~~~~~~~-----~~----~~~P~~~iR~~~~~~~ 364 (392)
T PLN03227 295 ITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSE-GVAVVSTGGHVKK-----FL----QLVPPPCLRVVANASH 364 (392)
T ss_pred cCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHC-CCEEEecccccCC-----cC----CCCCCceEEEEecCCC
Confidence 0112567777664200000 000124788888765 9988532110000 00 0234578999999999
Q ss_pred CHHHHHHHHHHHHHHHhcc
Q 012991 425 TLEDYEKFRDAVILLVEEG 443 (452)
Q Consensus 425 t~~di~~l~~~l~~~~~~~ 443 (452)
|++||++++++|+++++..
T Consensus 365 t~eei~~~~~~l~~~~~~~ 383 (392)
T PLN03227 365 TREDIDKLLTVLGEAVEAI 383 (392)
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999764
No 182
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.93 E-value=1.2e-23 Score=205.87 Aligned_cols=311 Identities=15% Similarity=0.188 Sum_probs=207.5
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|++......++++++++++.+. +++++++||++|+.+++.++ +++||+|+++.+.|.+.+..+..++..
T Consensus 45 Y~R~~~p~~~~le~~lA~l~g~---~~v~~~~gg~~Ai~~~l~al--------l~~GD~Vl~~~p~y~~~~~~~~~~~~~ 113 (382)
T TIGR02080 45 YSRSGNPTRDLLQQALAELEGG---AGAVVTNTGMSAIHLVTTAL--------LGPDDLLVAPHDCYGGTYRLLNALAKK 113 (382)
T ss_pred ccCCCCchHHHHHHHHHHHhCC---CcEEEEcCHHHHHHHHHHHH--------cCCCCEEEEcCCCcHHHHHHHHHHHhh
Confidence 3444456688999999999986 47999999999999999987 589999999999999888777766666
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.++++..++ ..+ .+.+++++ .+++++|++++++||||.+.|+++|.++|+++|+ ++++|++++.+
T Consensus 114 ~~~~v~~~d----~~d----~~~l~~ai------~~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~-~vvvD~a~~~~ 178 (382)
T TIGR02080 114 GCFRVLFVD----QGD----EQALRAAL------AQKPKLVLIETPSNPLLRVVDIAKICHLAKAVGA-VVVVDNTFLSP 178 (382)
T ss_pred cCeEEEEEC----CCC----HHHHHHhc------CcCceEEEEECCCCCCCEecCHHHHHHHHHHcCC-EEEEECCCccc
Confidence 678887773 222 67888888 5679999999999999999999999999999999 89999999876
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEEec-CccccCCCCCceeccCCCCcccccccccccCccccccHHHHH
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRK-SILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAV 310 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 310 (452)
....++ ..++|+++.|++||+.|+.+ .|+++.++ ++.+. + ... ....|. +.+ + .....++
T Consensus 179 ~~~~pl-~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~-l-~~~-~~~~g~----------~~s--p-~~a~l~l 241 (382)
T TIGR02080 179 ALQNPL-ALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEE-L-AWW-ANNLGV----------TGG--A-FDSYLTL 241 (382)
T ss_pred ccCCch-hhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHH-H-HHH-HHccCC----------CCC--H-HHHHHHH
Confidence 543222 34789999999999877766 57766654 44332 1 110 000111 111 1 1112223
Q ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc--------------ccccceEEEEcCCccccCChhhHHH
Q 012991 311 TFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP--------------EICAAMVMVGLPSRLRVMGEDDALR 375 (452)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (452)
+-++. +....++..+++..+.++|++.+.++ |..|. ...++++.|.+++ +.....+
T Consensus 242 r~l~t----l~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~-----~~~~~~~ 312 (382)
T TIGR02080 242 RGLRT----LVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKG-----GEQTVRR 312 (382)
T ss_pred cccch----HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecC-----cHHHHHH
Confidence 33332 33345667788888999999877653 43331 1347899998851 1223456
Q ss_pred HHHHHhhhcceEeeecccC-----CCCCCCCCCCC--CCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 376 LRGHLRVRFGVEVPIHYQA-----PKDDGQPQAGA--RDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 376 l~~~L~~~~gI~v~~~~~~-----~~~~~~~~~~~--~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
+.+.|. -+++.+..+... +....+..... +++.+..++.+|+|++. ||++.+++.|++.++
T Consensus 313 f~~~l~-~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl----E~~~dl~~dl~~al~ 380 (382)
T TIGR02080 313 FLGGLS-LFTLAESLGGVESLIAHPATMTHAAMGPEARAEAGISDTLLRLSVGL----EDADDLIADLEQGLR 380 (382)
T ss_pred HHHcCC-cceEeccCCCCcceeECCCccCcccCCHHHHHhcCCCcCeEEEEecc----CCHHHHHHHHHHHHh
Confidence 777773 345554332211 00000000000 11235567899999984 567777777777665
No 183
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.93 E-value=7.3e-23 Score=197.66 Aligned_cols=301 Identities=15% Similarity=0.177 Sum_probs=198.6
Q ss_pred CCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCC
Q 012991 48 FGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRF 127 (452)
Q Consensus 48 ~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~ 127 (452)
....|. +.++..+.+..+. +..+..+++++.+|+++|.+ ++++++++||++|+..++.++ .
T Consensus 32 l~~~~~-~~~~~~~~~~~~~---------g~~~~~~~Le~~lA~~~g~~-~e~ilv~~gg~~a~~~~~~al--------~ 92 (346)
T TIGR03576 32 LAGGFK-IDEEDLELLETYV---------GPAIFEEKVQELGREHLGGP-EEKILVFNRTSSAILATILAL--------E 92 (346)
T ss_pred CCCChh-HHHHHHHHHHHhc---------CCHHHHHHHHHHHHHHcCCC-cceEEEECCHHHHHHHHHHHh--------C
Confidence 444555 7777777665542 23467899999999999996 789999999999999999987 5
Q ss_pred CCCCEEEEe---CCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCc
Q 012991 128 HRNDTVLML---HCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPC 204 (452)
Q Consensus 128 ~~g~~Vl~~---~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG 204 (452)
++||+|+++ .+.|.++.... +..|.++... .+ ++.++. .+++++|+++. ++|+|
T Consensus 93 ~~gd~Vli~~~d~p~~~s~~~~~----~l~ga~~~~~------~~----l~~l~~--------~~~~~lIiitg-~s~~G 149 (346)
T TIGR03576 93 PPGRKVVHYLPEKPAHPSIPRSC----KLAGAEYFES------DE----LSELKK--------IDGTSLVVITG-STMDL 149 (346)
T ss_pred CCCCEEEECCCCCCCchhHHHHH----HHcCCEEecc------CC----HHHHhh--------CcCceEEEEEC-CCCCC
Confidence 899999974 46887765554 4457765322 11 233321 24578888865 68899
Q ss_pred cc---ccHHHHHHHHHHcCCCEEEEecccccCCccc-c---ccccCccEEEEcCcccCcCCCCcEEEEEecCccccCCCC
Q 012991 205 VV---IPVRKLVKICRDEGVDQVFVDAAHAMGSIKI-D---VKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMHH 277 (452)
Q Consensus 205 ~~---~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~-~---~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~~ 277 (452)
.+ .|+++|+++|+++|+ ++++|+||+.+.... + ....++|+++.|++|++.|+.| |++++++++++. + .
T Consensus 150 ~v~~~~~L~~i~~la~~~~~-~livDEAy~~~~~~~~~~~~~~~~~~divv~s~SKalaG~r~-G~v~~~~~li~~-l-~ 225 (346)
T TIGR03576 150 KVVSEEDLKRVIKQAKSKEA-IVLVDDASGARVRRLYGQPPALDLGADLVVTSTDKLMDGPRG-GLLAGRKELVDK-I-K 225 (346)
T ss_pred cccCHHHHHHHHHHHHHcCC-EEEEECCccccccccCCCCCHHHcCCcEEEeccchhccccce-EEEEeCHHHHHH-H-H
Confidence 98 578899999999999 799999998765321 1 1223578999999998768875 999999888775 2 1
Q ss_pred CceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceE
Q 012991 278 PVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMV 357 (452)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~ 357 (452)
.... .+..+.+...+.+..++++. . ..+..++..+++.+.+.+.+.. +.+..++ .+|+
T Consensus 226 ~~~~-----------~~~~s~~~~~~~aa~~aL~~---~--~~~~~~~~l~~r~~~~~~~l~~---~~~~~~~---~~f~ 283 (346)
T TIGR03576 226 SVGE-----------QFGLEAQAPLLAAVVRALEE---F--ELSRIRDAFKRKEEVYLRLFDK---LNVERTP---TGFV 283 (346)
T ss_pred Hhhc-----------CcccCccHHHHHHHHHHHhh---c--cHHHHHHHHHHHHHHHHHHHHh---CCCCcCC---CeEE
Confidence 1100 00011222233333444432 2 3355566777777777777763 3443322 4478
Q ss_pred EEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHH---HHHHHHH
Q 012991 358 MVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLE---DYEKFRD 434 (452)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~---di~~l~~ 434 (452)
++.++ ..+..+++..+.++.||.++++..+. ..++++|||++. ..+ +++++++
T Consensus 284 ~~~~~-------~~~~~~~~~~ll~~~gV~v~~~~~f~---------------~~~~~vRis~~~--~~~~~~~~~~~~~ 339 (346)
T TIGR03576 284 IKGVE-------EEKLIEIGLDLLRNYGIITITAVGMP---------------GASKTLRFDLAA--KDAERIGDDYLVE 339 (346)
T ss_pred EEeCC-------CCCHHHHHHHHHHhCCEEEeCCcccC---------------CCCCeEEEEEec--ChHHhcCHHHHHH
Confidence 88775 11233344444455799998654331 235799999984 332 7999999
Q ss_pred HHHHHH
Q 012991 435 AVILLV 440 (452)
Q Consensus 435 ~l~~~~ 440 (452)
+|++.+
T Consensus 340 al~~~~ 345 (346)
T TIGR03576 340 AVKDSL 345 (346)
T ss_pred HHHhcc
Confidence 998764
No 184
>PRK05968 hypothetical protein; Provisional
Probab=99.93 E-value=1.5e-23 Score=206.06 Aligned_cols=310 Identities=13% Similarity=0.123 Sum_probs=207.9
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|.+...+..+++++++++++|.+ .. +++++|++|+.+++.++ +++||+|+++.+.|.+....+...+..
T Consensus 57 Y~r~~~p~~~~le~~lA~l~g~~--~a-v~~~sG~~Ai~~al~al--------~~~Gd~Vl~~~~~y~~t~~~~~~~~~~ 125 (389)
T PRK05968 57 YSRGDNPTVRAFEEMLAKLEGAE--DA-RGFASGMAAISSTVLSF--------VEPGDRIVAVRHVYPDAFRLFETILKR 125 (389)
T ss_pred ccCCCChhHHHHHHHHHHHhCCC--cE-EEECCHHHHHHHHHHHH--------hCCCCEEEEeCCCchHHHHHHHHHHHH
Confidence 44555566899999999999995 34 55677788999888765 589999999999999988777766778
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|++++.++. ++ ++++++.+ +++++|++++++|+++.+.|+++|.++|+++|+ ++++|++++.+
T Consensus 126 ~G~~v~~vd~----~d----~~~l~~~i-------~~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi-~vivD~a~a~~ 189 (389)
T PRK05968 126 MGVEVDYVDG----RD----EEAVAKAL-------PGAKLLYLESPTSWVFELQDVAALAALAKRHGV-VTMIDNSWASP 189 (389)
T ss_pred cCceEEEeCC----CC----HHHHHHhc-------ccCCEEEEECCCCCCCcHHHHHHHHHHHHHcCC-EEEEECCCcch
Confidence 8999999842 22 57777776 357899999999999999999999999999999 89999999877
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHH
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVT 311 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 311 (452)
...... .+++|+++.|++|++.|+.+ .|+++.+++++++ + ......+.| +..+ . ......+.
T Consensus 190 ~~~~p~-~~g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~-l-~~~~~~~~g----------~~~~--~-~~A~~~l~ 253 (389)
T PRK05968 190 VFQRPI-TLGVDLVIHSASKYLGGHSDTVAGVVAGSKEHIAR-I-NAEAYPYLG----------AKLS--P-FEAWLLLR 253 (389)
T ss_pred hccCch-hcCCcEEEeeccccccCCCCeEEEEEEECHHHHHH-H-HHHHHHhCC----------CCCC--h-HHHHHHHc
Confidence 532222 35789999999999777654 5787777776654 1 111000111 1111 1 11111222
Q ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCc-CCCc---------ccccceEEEEcCCccccCChhhHHHHHHHHh
Q 012991 312 FVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSL-GSPP---------EICAAMVMVGLPSRLRVMGEDDALRLRGHLR 381 (452)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 381 (452)
.++ .+....++..+++..+.+.|++.++++. ..|. ...++++.|.++ ++.+..++++.|.
T Consensus 254 ~L~----tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~------~~~~~~~f~~~L~ 323 (389)
T PRK05968 254 GLR----TLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFR------EGIDVRAFADALK 323 (389)
T ss_pred ccC----cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEEC------CHHHHHHHHHhCC
Confidence 222 3455556667788999999999888753 3231 134679999885 2456788999995
Q ss_pred hhcceEeeecccCC----CCCCCCC---CCCCCCCCCccceEEecccccCCHHHHHHHHHHHH
Q 012991 382 VRFGVEVPIHYQAP----KDDGQPQ---AGARDKDGIITGYARISHQVYNTLEDYEKFRDAVI 437 (452)
Q Consensus 382 ~~~gI~v~~~~~~~----~~~~~~~---~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~ 437 (452)
. +++.+..+.... ....+.. ...+++.+..++.+|+|++..++++=++.+-.+|+
T Consensus 324 ~-~~~~~s~G~~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~ 385 (389)
T PRK05968 324 L-FRLGVSWGGHESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALA 385 (389)
T ss_pred c-cEEecCCCCCCceeeeCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHH
Confidence 4 588776544432 0000000 01111224557899999997654433444444443
No 185
>PLN02672 methionine S-methyltransferase
Probab=99.92 E-value=6.5e-23 Score=217.27 Aligned_cols=343 Identities=12% Similarity=0.103 Sum_probs=231.0
Q ss_pred CCCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCC--CCcEEEecChhHHHH
Q 012991 36 HQHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADD--VGEISLVDNATTAAA 112 (452)
Q Consensus 36 ~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~--~~~i~~t~g~t~a~~ 112 (452)
.+++++.|+.+... ++|+.+.+++.+.+.... . .++..+..+.+++++++.+|++. .++|++|+|+++++.
T Consensus 695 ~g~~vI~LsinE~d~ppPp~V~eAi~eal~~~~----~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~ 768 (1082)
T PLN02672 695 QESSLIHMDVDESFLPVPSAVKASIFESFVRQN----I--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFN 768 (1082)
T ss_pred CCCCEEEEeCCCCCCCCCHHHHHHHHHHHhhcC----C--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHH
Confidence 35689999988766 677889999887664321 1 11223456889999999989862 138999999999999
Q ss_pred HHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCce
Q 012991 113 IVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMI 191 (452)
Q Consensus 113 ~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~ 191 (452)
.++.++ +++||+|+++.|.|+.+...+ +..|.+++.+++. .++...+ .+.++++++ ..+.
T Consensus 769 lll~aL--------l~pGD~VLVp~PtY~~Y~~~a----~~~Ga~vv~Vpl~--~e~gf~lD~d~Le~al~-----~~~~ 829 (1082)
T PLN02672 769 KLVLCC--------VQEGGTLCFPAGSNGTYVSAA----KFLKANFRRIPTK--SSDGFKLTAKTLASTLE-----TVKK 829 (1082)
T ss_pred HHHHHH--------cCCCCEEEEeCCChHHHHHHH----HHcCCEEEEEecc--cccCCCCCHHHHHHHhc-----cCCC
Confidence 998877 589999999999999876665 4469999999652 1222334 788999884 2234
Q ss_pred EEEEEeccC-CCCccccc---HHHHHHHHHHcCCCEEEEecccccCCc---c---cccc----cc------CccEEEEcC
Q 012991 192 RLAIIDHIT-SMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSI---K---IDVK----EI------GADFYVSNL 251 (452)
Q Consensus 192 ~lv~~~~~~-n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~---~---~~~~----~~------~~d~~~~s~ 251 (452)
++|++++|+ ||||.+++ +++|+++|++||+ ++|+|++++.-.. + .++. .. ...+++.|+
T Consensus 830 ~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di-~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~Sf 908 (1082)
T PLN02672 830 PWVYISGPTINPTGLLYSNSEIEEILSVCAKYGA-RVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGL 908 (1082)
T ss_pred CEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCC-EEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCc
Confidence 578888897 99999997 4567888999999 7999999862111 0 1111 01 123577799
Q ss_pred cccCcCCCC--cEEEEEecC-ccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHH----HhhcCHHHHH
Q 012991 252 HKWFFCPPS--VAFLYCRKS-ILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVS----RFEGGIDGIM 324 (452)
Q Consensus 252 ~K~l~g~~G--~G~l~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~----~~~~g~~~~~ 324 (452)
+|. ++.+| +|+++++++ ++.. +. .... ...+.....+++.+++.... .+....+..+
T Consensus 909 SKk-f~lpGLRIGylIap~~eLi~~-l~-~~~~-------------~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r 972 (1082)
T PLN02672 909 STE-LLSGGHEFGFLALNDSVLIDA-FH-SAPG-------------LSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQK 972 (1082)
T ss_pred HHh-hccHHHHheeEEeCCHHHHHH-HH-Hhhh-------------hcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHH
Confidence 995 77777 899988654 5554 11 1100 01111122333333333221 0001345667
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccc------cC-----ChhhHHHHHHHHhhhcceEeeeccc
Q 012991 325 QRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLR------VM-----GEDDALRLRGHLRVRFGVEVPIHYQ 393 (452)
Q Consensus 325 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-----~~~~~~~l~~~L~~~~gI~v~~~~~ 393 (452)
+.++++++++.+.|.+. ++.+..|.+ +.++|+.++...+ .. .+.+..++++.|.++.||.+.++..
T Consensus 973 ~~Lk~rRd~L~e~L~~~-Gi~v~~PeG--GFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~ 1049 (1082)
T PLN02672 973 KILKSRAERLKETLEAC-GWDVLEPQG--GISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSW 1049 (1082)
T ss_pred HHHHHHHHHHHHHHHHC-CCeEecCCc--EEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcc
Confidence 77889999999999886 777665554 6677776532110 00 0246778999998767999987644
Q ss_pred CCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 394 APKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
+ ..++++||+++. +.+++++.++.|+++.+
T Consensus 1050 F----------------G~~g~~RIsfa~--~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1050 T----------------GIPGYCRFSFAL--EDSEFDRALKAIARFKE 1079 (1082)
T ss_pred c----------------CCCCeEEEEecC--CHHHHHHHHHHHHHHHH
Confidence 3 235799999985 78899999999998764
No 186
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.92 E-value=1.6e-23 Score=205.39 Aligned_cols=307 Identities=14% Similarity=0.142 Sum_probs=204.1
Q ss_pred hhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhc
Q 012991 75 FNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRA 154 (452)
Q Consensus 75 ~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~ 154 (452)
.+...+...++++.+++++|++ .+++++||++|+..++.++ +++||+|+++.+.|.+....+..++.+.
T Consensus 49 ~r~~~p~~~~le~~la~l~g~~---~~~~~~sG~~Ai~~al~al--------~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~ 117 (380)
T TIGR01325 49 SRYANPTVAAFEERIAALEGAE---RAVATATGMSAIQAALMTL--------LQAGDHVVASRSLFGSTVGFISEILPRF 117 (380)
T ss_pred ecCCCchHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHH--------hCCCCEEEEecCCcchHHHHHHHHHHHh
Confidence 3334566899999999999984 5688999999999999876 4889999999999988777776667788
Q ss_pred CcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCC
Q 012991 155 GGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGS 234 (452)
Q Consensus 155 g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~ 234 (452)
|++++.++. ++ ++++++++ .+++++|++++++||+|.+.|+++|.++|+++|+ ++++|++++.+.
T Consensus 118 g~~v~~v~~----~d----~~~l~~~i------~~~tklV~le~p~np~g~~~dl~~I~~la~~~gi-~livD~a~~~~~ 182 (380)
T TIGR01325 118 GIEVSFVDP----TD----LNAWEAAV------KPNTKLVFVETPSNPLGELVDIAALAELAHAIGA-LLVVDNVFATPV 182 (380)
T ss_pred CCEEEEECC----CC----HHHHHHhc------CCCceEEEEECCCCCCCeeeCHHHHHHHHHHcCC-EEEEECCCcccc
Confidence 999999843 32 57788877 5689999999999999999999999999999999 899999987654
Q ss_pred ccccccccCccEEEEcCcccCcCCC-C-cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHH
Q 012991 235 IKIDVKEIGADFYVSNLHKWFFCPP-S-VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTF 312 (452)
Q Consensus 235 ~~~~~~~~~~d~~~~s~~K~l~g~~-G-~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 312 (452)
....+ ..++|+++.|++|+++|+. . .|+++.++++++. +. .... .. |.... +. ....+++-
T Consensus 183 ~~~pl-~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~-l~-~~~~-~~-----------g~~~~-p~-~a~~~l~~ 245 (380)
T TIGR01325 183 LQQPL-KLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAE-VA-VYLR-HT-----------GPAMS-PF-NAWVLLKG 245 (380)
T ss_pred cCCch-hhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHH-HH-HHHH-hh-----------CCCCC-HH-HHHHHHhc
Confidence 32222 4578999999999865542 1 3777777766554 11 1100 00 11111 11 11222322
Q ss_pred HHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc--------------ccccceEEEEcCCccccCChhhHHHHH
Q 012991 313 VSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP--------------EICAAMVMVGLPSRLRVMGEDDALRLR 377 (452)
Q Consensus 313 ~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~l~ 377 (452)
+. .++...++..+++.++.+.|++.++++ |..|. ...++++.|.++ +.....++.
T Consensus 246 l~----tl~~r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~------~~~~~~~f~ 315 (380)
T TIGR01325 246 LE----TLSLRMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVA------DRAAAWKVL 315 (380)
T ss_pred cC----cHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEC------CHHHHHHHH
Confidence 22 344456677888999999999887653 32221 124789999885 233456777
Q ss_pred HHHhhhcceEeeecccC-----CCCCCCCCCC--CCCCCCCccceEEecccccCCHHHHHHHHHHHHHH
Q 012991 378 GHLRVRFGVEVPIHYQA-----PKDDGQPQAG--ARDKDGIITGYARISHQVYNTLEDYEKFRDAVILL 439 (452)
Q Consensus 378 ~~L~~~~gI~v~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~ 439 (452)
+.|. -..+.+..+... +....+.... ..+..+..++.+|+|++. ||.+.+++.|++.
T Consensus 316 ~~l~-~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~a 379 (380)
T TIGR01325 316 DAVE-LVSITNNLGDAKSTITHPATTTHGRMQPEERAAAGIGDGLVRLSVGL----EDVDDLIADLKRA 379 (380)
T ss_pred HcCC-cceEcccCCCCCeeeeCCCccCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHhh
Confidence 7773 234444332111 0000000000 011225567899999984 5666677766654
No 187
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.92 E-value=3.7e-23 Score=202.73 Aligned_cols=316 Identities=16% Similarity=0.102 Sum_probs=207.1
Q ss_pred CCCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh----C---CCCCCcEEEecCh
Q 012991 36 HQHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI----N---ADDVGEISLVDNA 107 (452)
Q Consensus 36 ~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~---~~~~~~i~~t~g~ 107 (452)
.+..++.|+.+.+. +.++.+.+++...... . .|....+..++++++++++ | ++ +++|++|+|+
T Consensus 25 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~-~-------~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~-~~~I~it~G~ 95 (364)
T PRK07865 25 HPDGIVDLSVGTPVDPVPPVIQEALAAAADA-P-------GYPTTAGTPELREAIVGWLARRRGVTGLD-PAAVLPVIGS 95 (364)
T ss_pred cCCCEEEcCCCCCCCCCCHHHHHHHHHHHhh-C-------CCCCccCCHHHHHHHHHHHHHHcCCCCCC-cccEEEccCh
Confidence 34568899888654 4467677877654321 1 2222334556666777766 4 43 7899999999
Q ss_pred hHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccC
Q 012991 108 TTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKD 187 (452)
Q Consensus 108 t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~ 187 (452)
++++..++.++ .+++||+|++++|.|+++...+ ...|+++..+ + . .++ +.
T Consensus 96 ~~~i~~~~~~l-------~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~----~--~----~~~----l~----- 145 (364)
T PRK07865 96 KELVAWLPTLL-------GLGPGDVVVIPELAYPTYEVGA----RLAGATVVRA----D--S----LTE----LG----- 145 (364)
T ss_pred HHHHHHHHHHH-------cCCCCCEEEECCCCcccHHHHH----HhcCCEEEec----C--C----hhh----CC-----
Confidence 99999887765 2489999999999998875554 4458888776 2 1 122 21
Q ss_pred CCceEEEEEeccCCCCcccccH---HHHHHHHHHcCCCEEEEecccccCCc---ccc-cc------ccCccEEEEcCccc
Q 012991 188 GKMIRLAIIDHITSMPCVVIPV---RKLVKICRDEGVDQVFVDAAHAMGSI---KID-VK------EIGADFYVSNLHKW 254 (452)
Q Consensus 188 ~~~~~lv~~~~~~n~tG~~~~l---~~i~~l~~~~~~~~~ivD~a~~~g~~---~~~-~~------~~~~d~~~~s~~K~ 254 (452)
..++++|++++++||||.+++. ++|.++|+++|+ ++|+|++++.... +.. +. ..+-.+++.|++|.
T Consensus 146 ~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~-~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 224 (364)
T PRK07865 146 PQRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGA-VVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQ 224 (364)
T ss_pred cccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCC-EEEEecchhhhccCCCCCccccccccCCccceEEEEeechhc
Confidence 2578999999999999999885 577888999999 7999999864221 111 00 11234788899996
Q ss_pred CcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q 012991 255 FFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQAL 332 (452)
Q Consensus 255 l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~ 332 (452)
+|.+| +|+++.+++++.. + ...... .....+...+.++..+++.. ...+..++.++++++
T Consensus 225 -~~~~GlRiG~i~~~~~~~~~-~-~~~~~~-----------~~~~~~~~~q~~~~~~l~~~----~~~~~~~~~~~~~~~ 286 (364)
T PRK07865 225 -SNLAGYRAGFVAGDPALVAE-L-LEVRKH-----------AGMMVPAPVQAAMVAALGDD----AHVREQRERYARRRA 286 (364)
T ss_pred -cCCCceeeEEEecCHHHHHH-H-HHHHHh-----------cCCCcCHHHHHHHHHHhCCH----HHHHHHHHHHHHHHH
Confidence 65555 7898887777664 1 111000 00112222333333333221 135566777888888
Q ss_pred HHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCc
Q 012991 333 KMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGII 412 (452)
Q Consensus 333 ~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~ 412 (452)
.+.+.|.+. |+.+..++. +.++|+.++ .+..++.+.|.+ .||.+.++..+.. ..
T Consensus 287 ~l~~~L~~~-g~~~~~~~~--~~~~~~~~~--------~~~~~~~~~l~~-~gv~v~pg~~f~~--------------~~ 340 (364)
T PRK07865 287 VLRPALEAA-GFRVDHSEA--GLYLWATRG--------EDCWDTVAWLAE-RGILVAPGDFYGP--------------AG 340 (364)
T ss_pred HHHHHHHHc-CCcccCCCc--cEEEEEeCC--------CCHHHHHHHHHH-CCEEEeCccccCc--------------CC
Confidence 899999875 776655544 556777653 244567788865 5999976554321 23
Q ss_pred cceEEecccccCCHHHHHHHHHHHH
Q 012991 413 TGYARISHQVYNTLEDYEKFRDAVI 437 (452)
Q Consensus 413 ~~~iRis~~~~~t~~di~~l~~~l~ 437 (452)
++++||+++. +++++++.++.|+
T Consensus 341 ~~~iRi~~~~--~~~~~~~~~~~l~ 363 (364)
T PRK07865 341 AQHVRVALTA--TDERIAAAVERLA 363 (364)
T ss_pred CCEEEEEecC--CHHHHHHHHHHhh
Confidence 5799999985 6899999998875
No 188
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.92 E-value=2e-22 Score=214.33 Aligned_cols=356 Identities=17% Similarity=0.187 Sum_probs=226.4
Q ss_pred CCCeEEeccCCCCCCcHHHHHHHHHHHHHHhcCCchh--hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEec-ChhHHHHH
Q 012991 37 QHGVARINNGSFGSCPKSVLADQQKWQLKFLQQPDDF--YFNSLRKGILESRAAVKDLINADDVGEISLVD-NATTAAAI 113 (452)
Q Consensus 37 ~~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~-g~t~a~~~ 113 (452)
.+.++.|+. .+...++.+...+...-.-....|... -..+..+.+.++++++++++|.+ ++.+.. ||++|...
T Consensus 498 ~~~~i~lGs-ct~~~~p~~~~~~~~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG~d---~~sl~~~~ga~ge~a 573 (954)
T PRK05367 498 DRSMIPLGS-CTMKLNAAAEMIPITWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEITGYD---AVSLQPNAGAQGEYA 573 (954)
T ss_pred ccceeeCCc-CCCcCCHHHHHHHHhCccccccCCCChHHHHHHHHHHHHHHHHHHHHHHCCC---CEEECccHHHHHHHH
Confidence 345677776 455444445444433221111112111 12345678899999999999995 455554 56666645
Q ss_pred HHHHhhcccccCCCCCC----CEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCC
Q 012991 114 VLQQIGRGFTEGRFHRN----DTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDG 188 (452)
Q Consensus 114 ~~~~l~~~~~~~~~~~g----~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~ 188 (452)
.+.++ |.|. .++| ++|++++..|.++...+ ...|.+++.++ .+.++.+ +++|++.++.. .
T Consensus 574 gL~a~-r~~~---~~~G~~~r~~vlis~~aH~snp~sa----~~~G~~vv~v~----~d~~G~iD~~~L~~~i~~~---~ 638 (954)
T PRK05367 574 GLLAI-RAYH---ESRGEGHRDVCLIPSSAHGTNPASA----VMAGMKVVVVA----CDENGNIDLDDLRAKAEEH---A 638 (954)
T ss_pred HHHHH-HHHh---hccCCCCCCEEEEEchhhhhhHHHH----HHCCCEEEEEC----CCCCCCcCHHHHHHHHhcc---C
Confidence 55433 3221 1233 47999999999987775 44699999994 4445566 89999999632 2
Q ss_pred CceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCcccc-ccccCccEEEEcCcccCcCCCC-----cE
Q 012991 189 KMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKID-VKEIGADFYVSNLHKWFFCPPS-----VA 262 (452)
Q Consensus 189 ~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~-~~~~~~d~~~~s~~K~l~g~~G-----~G 262 (452)
.++.+|+++++++..+...|+++|+++||++|+ ++++|+|+..+...+. ...+++|++++|+|||+++|.| +|
T Consensus 639 ~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~-~v~VDgA~~~al~~l~~pg~~GADi~~~s~HK~f~~P~G~GGPg~G 717 (954)
T PRK05367 639 DNLAAIMITYPSTHGVFEETIREICEIVHEHGG-QVYLDGANMNAQVGLARPGDIGADVSHLNLHKTFCIPHGGGGPGVG 717 (954)
T ss_pred CCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCC-EEEEECcChhhccCCCChhhcCCCEEEecCcccCCCCcCCCCCceE
Confidence 468899999998863334799999999999999 7999999986655443 3467899999999999865554 67
Q ss_pred EEEEecCccccCCCCCceeccCCCCcccccccccccCcc---ccccHHHHHHHHHHhhcCHHHHHHHHH---HHHHHHHH
Q 012991 263 FLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYS---AQLVIPSAVTFVSRFEGGIDGIMQRNH---EQALKMAR 336 (452)
Q Consensus 263 ~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~al~~~~~~~~g~~~~~~~~~---~~~~~l~~ 336 (452)
++++++.+... ++... -+... .....|+.... +...+..+..++..+ |.+.+++..+ .+++|+.+
T Consensus 718 ~l~vr~~l~p~--lpg~~---v~~~~--~~~~~g~v~ta~~g~al~~~~a~~yi~~~--G~~Glr~~a~~~~~~A~Yl~~ 788 (954)
T PRK05367 718 PIGVKAHLAPF--LPGHP---VQIAG--GETGIGAVSAAPFGSASILPISWMYIRMM--GAEGLRQATEVAILNANYIAK 788 (954)
T ss_pred EEeeccccccc--CCCCc---cCcCC--CCCCcCcchhHHHHHHHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHHH
Confidence 99998655543 12111 00000 00001222211 122333345555555 6565555544 99999999
Q ss_pred HHHHHcCCCcCCCccc--ccceEEEE-cCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCcc
Q 012991 337 MLANAWGTSLGSPPEI--CAAMVMVG-LPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIIT 413 (452)
Q Consensus 337 ~L~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (452)
.|.+...+...++... ..+++.+. ++. ..+.+..++.+.|.+ +||..+..+.+ ..
T Consensus 789 ~L~~~~~~~~~~~~~~~~~e~i~~~~~~~~----~~g~~~~di~krL~d-~G~~~~t~~~p-----------------v~ 846 (954)
T PRK05367 789 RLKDHYPVLYTGANGRVAHECILDLRPLKE----STGITVDDIAKRLID-YGFHAPTMSFP-----------------VA 846 (954)
T ss_pred HHHhhcCccccCCCCCcccceEEEeecccc----cCCCCHHHHHHHHHH-CCCeEeecCCc-----------------cC
Confidence 9987544443333221 13333332 221 123466889999955 69998764332 25
Q ss_pred ceEEecccccCCHHHHHHHHHHHHHHHhcc
Q 012991 414 GYARISHQVYNTLEDYEKFRDAVILLVEEG 443 (452)
Q Consensus 414 ~~iRis~~~~~t~~di~~l~~~l~~~~~~~ 443 (452)
+.+|+++..+++.+|+|+++++|+.+.++-
T Consensus 847 ~~l~i~ptE~~s~~elDr~~~al~~i~~e~ 876 (954)
T PRK05367 847 GTLMVEPTESESKAELDRFCDAMIAIRAEI 876 (954)
T ss_pred CEEEEEeeecCCHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999887643
No 189
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.92 E-value=1.7e-23 Score=204.93 Aligned_cols=310 Identities=16% Similarity=0.197 Sum_probs=209.3
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|.+...+..+++++++++++|.+ ..++++||++|+..++.++ +++||+|+++.+.|.+....+...+..
T Consensus 34 y~r~~~p~~~~le~~la~l~g~~---~a~~~~sG~~Ai~~~l~~l--------~~~gd~Vl~~~~~y~~~~~~~~~~~~~ 102 (369)
T cd00614 34 YSRIGNPTVDALEKKLAALEGGE---AALAFSSGMAAISTVLLAL--------LKAGDHVVASDDLYGGTYRLFERLLPK 102 (369)
T ss_pred eECCCChhHHHHHHHHHHHHCCC---CEEEEcCHHHHHHHHHHHH--------cCCCCEEEECCCCcchHHHHHHHHHhh
Confidence 44445677899999999999984 6677888999999999987 589999999999999988777766677
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|+++..++ .++ ++++++++ .+++++|++++++||+|.+.|+++|+++|+++|+ ++++|++++.+
T Consensus 103 ~g~~~~~v~----~~d----~~~l~~~i------~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~-~livD~t~~~~ 167 (369)
T cd00614 103 LGIEVTFVD----PDD----PEALEAAI------KPETKLVYVESPTNPTLKVVDIEAIAELAHEHGA-LLVVDNTFATP 167 (369)
T ss_pred cCeEEEEeC----CCC----HHHHHHhc------CCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCC-EEEEECCCcch
Confidence 899999884 333 67888888 4689999999999999999999999999999999 89999999877
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEEec-CccccCCCCCceeccCCCCcccccccccccCccccccHHHHH
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRK-SILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAV 310 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 310 (452)
... ....+++|+++.|++|+++|+.. .|+++.++ +++++ + ... ...+| +..+ + .....++
T Consensus 168 ~~~-~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~-l-~~~-~~~~g----------~~~~--p-~~a~~~l 230 (369)
T cd00614 168 YLQ-RPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQR-L-RFL-RLALG----------TILS--P-FDAWLLL 230 (369)
T ss_pred hcC-ChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHH-H-HHH-HHhhC----------CCCC--H-HHHHHHH
Confidence 642 22235789999999998665432 58888877 55554 1 111 00011 1111 1 1112222
Q ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc--------------ccccceEEEEcCCccccCChhhHHH
Q 012991 311 TFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP--------------EICAAMVMVGLPSRLRVMGEDDALR 375 (452)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (452)
+.++ .+....++..+++.++.+.|.+.+++. +..|. ...++++.|.++. +.....+
T Consensus 231 ~~l~----tl~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~-----~~~~~~~ 301 (369)
T cd00614 231 RGLK----TLPLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKG-----GLEAAKK 301 (369)
T ss_pred cCCC----CHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCC-----CHHHHHH
Confidence 2222 344556778889999999999887653 32331 1247899998851 2334556
Q ss_pred HHHHHhhhcceEeeecccC-----CCCCCCCCCCC--CCCCCCccceEEecccccCCHHHHHHHHHHHHHHH
Q 012991 376 LRGHLRVRFGVEVPIHYQA-----PKDDGQPQAGA--RDKDGIITGYARISHQVYNTLEDYEKFRDAVILLV 440 (452)
Q Consensus 376 l~~~L~~~~gI~v~~~~~~-----~~~~~~~~~~~--~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~ 440 (452)
+.+.|. -+++....+... +....++.... ++..+..++.+|+|++. ||++.+++.|++.+
T Consensus 302 f~~~l~-~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGl----E~~~dl~~dl~~al 368 (369)
T cd00614 302 FLNALK-LFSLAVSLGGVESLVEHPASMTHSQLPPEERAAAGITPGLVRLSVGI----EDVEDLIADLEQAL 368 (369)
T ss_pred HHHcCC-cceEcccCCCCceeeeCCcccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHhh
Confidence 666663 233333221110 11111111111 11224557899999985 67778888877664
No 190
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.92 E-value=3.7e-23 Score=202.06 Aligned_cols=315 Identities=16% Similarity=0.093 Sum_probs=205.4
Q ss_pred CCCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh----C---CCCCCcEEEecCh
Q 012991 36 HQHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI----N---ADDVGEISLVDNA 107 (452)
Q Consensus 36 ~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~---~~~~~~i~~t~g~ 107 (452)
.++.++.|..+.+. +.++.+.+++.+.... . .|....+..++++++++++ | ++ +++|++|+|+
T Consensus 19 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~-~-------~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~-~~~I~it~G~ 89 (357)
T TIGR03539 19 HPDGIVDLSVGTPVDPVPPLIRAALAAAADA-P-------GYPQTWGTPELREAIVDWLERRRGVPGLD-PTAVLPVIGT 89 (357)
T ss_pred CCCCeEEccCCCCCCCCCHHHHHHHHHHHhh-C-------CCCcccCCHHHHHHHHHHHHHhcCCCCCC-cCeEEEccCh
Confidence 45668888877553 5566678887764321 1 1222233445555666555 3 53 7899999999
Q ss_pred hHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccC
Q 012991 108 TTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKD 187 (452)
Q Consensus 108 t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~ 187 (452)
++++..++.++ ..++||.|++++|+|+++.... ...|.+++.+ + + .+ .+.
T Consensus 90 ~~~i~~~~~~l-------~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v----~--~----~~----~l~----- 139 (357)
T TIGR03539 90 KELVAWLPTLL-------GLGPGDTVVIPELAYPTYEVGA----LLAGATPVAA----D--D----PT----ELD----- 139 (357)
T ss_pred HHHHHHHHHHH-------cCCCCCEEEECCCCcHHHHHHH----HhcCCEEecc----C--C----hh----hcC-----
Confidence 99999988765 2489999999999998865443 4468887766 2 1 12 121
Q ss_pred CCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCC---cc---cccc----ccCccEEEEcCccc
Q 012991 188 GKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGS---IK---IDVK----EIGADFYVSNLHKW 254 (452)
Q Consensus 188 ~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~---~~---~~~~----~~~~d~~~~s~~K~ 254 (452)
..++++|++++++||||..++ +++|.++|+++|+ ++|+|+++..-. .+ ++.. ...-.+++.|++|.
T Consensus 140 ~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~-~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 218 (357)
T TIGR03539 140 PVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGA-VVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKR 218 (357)
T ss_pred ccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCe-EEEEecchhhhccCCCCccceecccCCCccccEEEEeccccc
Confidence 257899999999999999997 4568888999999 799999975311 11 1110 01124788899996
Q ss_pred CcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q 012991 255 FFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQAL 332 (452)
Q Consensus 255 l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~ 332 (452)
++.+| +|+++++++++.. + ...... ....++...+.++..+++... ..+.+++.++++++
T Consensus 219 -~~~~G~R~G~~i~~~~~~~~-~-~~~~~~-----------~~~~~~~~~q~~~~~~l~~~~----~~~~~~~~~~~~~~ 280 (357)
T TIGR03539 219 -SNLAGYRAGFVAGDPALVAE-L-LTVRKH-----------AGLMVPAPVQAAMVAALGDDG----HVAEQKARYAARRA 280 (357)
T ss_pred -cCCCceeEEEEecCHHHHHH-H-HHHHhh-----------cccCCCHHHHHHHHHHcCCHH----HHHHHHHHHHHHHH
Confidence 56666 7888877776664 1 111000 001233333333333433211 35566777888888
Q ss_pred HHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCc
Q 012991 333 KMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGII 412 (452)
Q Consensus 333 ~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~ 412 (452)
.+.+.|.+. |+.+..+.+ +.++|+.++ .+..++.+.|.+ .||.+.++..+.. ..
T Consensus 281 ~~~~~L~~~-g~~~~~p~~--~~~~~~~~~--------~~~~~~~~~l~~-~gV~v~pg~~f~~--------------~~ 334 (357)
T TIGR03539 281 QLKPALEKA-GFRIDHSEA--GLYLWATRG--------EDAWDTVDRLAE-LGILVAPGDFYGP--------------AG 334 (357)
T ss_pred HHHHHHHHc-CCCCcCCCc--cEEEEEECC--------CCHHHHHHHHHh-CCEEECCccccCC--------------CC
Confidence 899999875 676655543 567777664 245678888865 5999976554321 23
Q ss_pred cceEEecccccCCHHHHHHHHHHH
Q 012991 413 TGYARISHQVYNTLEDYEKFRDAV 436 (452)
Q Consensus 413 ~~~iRis~~~~~t~~di~~l~~~l 436 (452)
++++|+|++. +.++++++++.|
T Consensus 335 ~~~iRis~~~--~~~~i~~~~~~l 356 (357)
T TIGR03539 335 SQHVRVALTA--TDERIAAAVARL 356 (357)
T ss_pred CCeEEEEecC--CHHHHHHHHHhh
Confidence 5799999985 678898888776
No 191
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=4.8e-23 Score=199.13 Aligned_cols=309 Identities=13% Similarity=0.139 Sum_probs=209.4
Q ss_pred CCCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhC---CCCCCcEEEecChhHHH
Q 012991 36 HQHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLIN---ADDVGEISLVDNATTAA 111 (452)
Q Consensus 36 ~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~---~~~~~~i~~t~g~t~a~ 111 (452)
.+.+++.|+.+... +.|+.+.+++.+.+.... ...| . .....++|++++++++ ++ +++|++|+|+++++
T Consensus 17 ~~~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~---~~~Y--~-~~~~~~Lr~aia~~~~~~~~~-~~~i~it~Ga~~~i 89 (335)
T PRK14808 17 EKRDRTYLALNENPFPFPEDLVDEVFRRLNSDT---LRIY--Y-DSPDEELIEKILSYLDTDFLS-KNNVSVGNGADEII 89 (335)
T ss_pred CCCceeEecCCCCCCCCCHHHHHHHHHHhhhhh---hhcC--C-CCChHHHHHHHHHHhCCCCCC-cceEEEcCCHHHHH
Confidence 45678899877665 567778888877653210 0111 1 1246789999999998 64 78999999999999
Q ss_pred HHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCce
Q 012991 112 AIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMI 191 (452)
Q Consensus 112 ~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~ 191 (452)
.+++.++ ++|++.+|+|+.....+ +..|.+++.+++ ++++.+ +.. .+ .++
T Consensus 90 ~~~~~~~------------d~v~v~~P~y~~~~~~~----~~~g~~~~~v~~----~~~~~~-~~~--~~-------~~~ 139 (335)
T PRK14808 90 YVMMLMF------------DRSVFFPPTYSCYRIFA----KAVGAKFLEVPL----TKDLRI-PEV--NV-------GEG 139 (335)
T ss_pred HHHHHHh------------CcEEECCCCHHHHHHHH----HHcCCeEEEecC----CCcCCC-Chh--Hc-------cCC
Confidence 9998854 57999999998865554 456999999954 322222 111 12 246
Q ss_pred EEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCC--cccc-ccccCccEEEEcCcccCcCCCC--cEEEEE
Q 012991 192 RLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGS--IKID-VKEIGADFYVSNLHKWFFCPPS--VAFLYC 266 (452)
Q Consensus 192 ~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~--~~~~-~~~~~~d~~~~s~~K~l~g~~G--~G~l~~ 266 (452)
+++++++|+||||.+++.+++.+++ ++++ ++|+|+++..-. .... .....--+++.|++|. +|.+| +|++++
T Consensus 140 ~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~-~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~~S~SK~-~~l~GlRvG~~v~ 216 (335)
T PRK14808 140 DVVFIPNPNNPTGHVFEREEIERIL-KTGA-FVALDEAYYEFHGESYVDLLKKYENLAVIRTFSKA-FSLAAQRIGYVVS 216 (335)
T ss_pred CEEEEeCCCCCCCCCcCHHHHHHHH-hcCC-EEEEECchhhhcCCchHHHHHhCCCEEEEEechhh-ccCcccceEEEEe
Confidence 8999999999999999999999998 5799 799999975321 1111 1112234777899996 67666 899999
Q ss_pred ecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 012991 267 RKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSL 346 (452)
Q Consensus 267 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~ 346 (452)
++++++. + ..... ..+.+...+.++..+++... -.++..+.+++.++.+.+.|.+. |+.+
T Consensus 217 ~~~~~~~-l-~~~~~-------------~~~~~~~~q~a~~~~l~~~~----~~~~~~~~~~~~r~~l~~~L~~~-g~~~ 276 (335)
T PRK14808 217 SEKFIDA-Y-NRVRL-------------PFNVSYVSQMFAKVALDHRE----IFEERTKFIVEERERMKSALREM-GYRI 276 (335)
T ss_pred CHHHHHH-H-HHhcC-------------CCCCCHHHHHHHHHHHhCHH----HHHHHHHHHHHHHHHHHHHHHHC-CCEE
Confidence 8877765 2 11100 01122233333344443222 13444556667778888888876 6665
Q ss_pred CCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCH
Q 012991 347 GSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTL 426 (452)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~ 426 (452)
..+ . ++++|+.++ ..+..++.+.|.+ +||.|+.. ..++||+++ +.
T Consensus 277 ~~~-~--g~f~~~~l~-------~~~~~~~~~~l~~-~Gi~V~~~---------------------~~~~Risi~---~~ 321 (335)
T PRK14808 277 TDS-R--GNFVFIFME-------KEEKERLLEHLRA-KNIAVRSF---------------------REGVRITIG---KR 321 (335)
T ss_pred CCC-C--CeEEEEeCC-------CccHHHHHHHHHH-CCeEEEEC---------------------CCCeEEecC---CH
Confidence 544 2 678898886 2345678888876 59999731 147999998 78
Q ss_pred HHHHHHHHHHHHH
Q 012991 427 EDYEKFRDAVILL 439 (452)
Q Consensus 427 ~di~~l~~~l~~~ 439 (452)
++.++++++|+++
T Consensus 322 ~~~~~~~~~l~~~ 334 (335)
T PRK14808 322 EENDMILKELEVF 334 (335)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999753
No 192
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.92 E-value=2.9e-23 Score=203.93 Aligned_cols=311 Identities=17% Similarity=0.172 Sum_probs=203.3
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|.+...+...++++++++++|.+ .. ++++||++|+.+++.++ +++||+|+++.+.|.+....+..+..+
T Consensus 55 Y~r~~~p~~~~Le~~lA~~~g~~--~~-i~~~sG~~Ai~~~l~al--------l~~Gd~Vl~~~~~y~~t~~~~~~~~~~ 123 (388)
T PRK07811 55 YARTGNPTRTALEEQLAALEGGA--YG-RAFSSGMAATDCLLRAV--------LRPGDHIVIPNDAYGGTFRLIDKVFTR 123 (388)
T ss_pred ccCCCCccHHHHHHHHHHHhCCC--ce-EEeCCHHHHHHHHHHHH--------hCCCCEEEEcCCCchHHHHHHHHhCcC
Confidence 34444566899999999999995 33 55567799999999987 589999999999999877776655556
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|++++.++. .+ ++++++++ ++++++|++++++||+|.+.|+++|.++|+++|+ ++|+|++++.+
T Consensus 124 ~gi~~~~~d~----~d----~e~l~~~i------~~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi-~lIvD~a~a~~ 188 (388)
T PRK07811 124 WGVEYTPVDL----SD----LDAVRAAI------TPRTKLIWVETPTNPLLSITDIAALAELAHDAGA-KVVVDNTFASP 188 (388)
T ss_pred CCeEEEEeCC----CC----HHHHHHhc------CcCCeEEEEECCCCCcceecCHHHHHHHHHHcCC-EEEEECCCCcc
Confidence 6888888742 22 68888888 5689999999999999999999999999999999 79999999877
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHH
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVT 311 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 311 (452)
...... ..++|++++|++|+++|+.+ .|+++++++.+...+ . ...... +.... .. ....++.
T Consensus 189 ~~~~p~-~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~-~-~~~~~~-----------g~~~s-~~-~a~l~~~ 252 (388)
T PRK07811 189 YLQQPL-ALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAF-A-FLQNGA-----------GAVPG-PF-DAYLTLR 252 (388)
T ss_pred ccCCch-hhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHH-H-HHHHhc-----------CCCCC-HH-HHHHHHh
Confidence 643332 35789999999999776654 477777654332201 1 100000 11100 11 1112222
Q ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc--------------ccccceEEEEcCCccccCChhhHHHH
Q 012991 312 FVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP--------------EICAAMVMVGLPSRLRVMGEDDALRL 376 (452)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~l 376 (452)
-++ .+....++..+++..+.+.|++.+++. |..|. ...++++.|.++. +...+.++
T Consensus 253 ~L~----tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~-----~~~~~~~f 323 (388)
T PRK07811 253 GLK----TLAVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAG-----GEEAARDF 323 (388)
T ss_pred ccC----cHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCC-----CHHHHHHH
Confidence 222 244455667788999999999887763 33331 1347899998851 12345667
Q ss_pred HHHHhhhcceEeeecccC-----CCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 377 RGHLRVRFGVEVPIHYQA-----PKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 377 ~~~L~~~~gI~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
.+.|. -+.+.+..+... +....+.. ...+..+..++.||+|++. ||.+.+++.|++.++
T Consensus 324 ~~~l~-~~~~~~s~G~~~sl~~~~~~~~~~~-~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 387 (388)
T PRK07811 324 CARTK-VFTLAESLGGVESLIEHPSAMTHAS-TAGSQLEVPDDLVRLSVGI----EDVADLLADLEQALG 387 (388)
T ss_pred HHhCC-cceeeccCCCCcceEeCCcccCccc-CCHhhcCCCCCEEEEEeCC----CCHHHHHHHHHHHhh
Confidence 77763 234444322110 00000000 0011124557899999985 456666666666553
No 193
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.92 E-value=3e-23 Score=202.29 Aligned_cols=310 Identities=13% Similarity=0.137 Sum_probs=207.5
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|++...+....+++.++++.|.+ .+++++||++|+..++.++ +++||+|+++++.|++....+......
T Consensus 44 Y~r~gnPt~~~lE~~lA~l~g~~---~~~~~~sG~~Ai~~al~al--------l~~GD~Vl~~~~~y~~t~~~~~~~~~~ 112 (377)
T TIGR01324 44 YGRRGTLTHFALQDAMCELEGGA---GCYLYPSGLAAVTNSILAF--------VKAGDHVLMVDSAYEPTRYFCDIVLKR 112 (377)
T ss_pred ccCCCCccHHHHHHHHHHHhCCC---cEEEECcHHHHHHHHHHHh--------cCCCCEEEEcCCCcHHHHHHHHHHHHh
Confidence 44444556788999999999984 7889999999999999887 589999999999998766554444566
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|+++..++ ... .+.+++.+ .+++++|++++++||+|.+.|+++|+++|+++|+ ++++|++|+.|
T Consensus 113 ~gi~v~~~d----~~~----~e~l~~~i------~~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~-~livD~t~a~g 177 (377)
T TIGR01324 113 MGVDITYYD----PLI----GEDIATLI------QPNTKVLFLEAPSSITFEIQDIPAIAKAARNPGI-VIMIDNTWAAG 177 (377)
T ss_pred cCcEEEEEC----CCC----HHHHHHhc------CCCceEEEEECCCCCCCcHHHHHHHHHHHHHcCC-EEEEECCCccc
Confidence 789988883 222 26788888 5789999999999999999999999999999999 79999999998
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHH
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVT 311 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 311 (452)
... ....+++|+++.|++||++|..+ .|+++.+++..+. +. .. ...+|. ..+. ......++
T Consensus 178 ~~~-~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~-l~-~~-~~~~G~----------~l~p---~~a~~~~r 240 (377)
T TIGR01324 178 LLF-KPLEHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQ-LR-EH-SYLMGQ----------MVDA---DDAYTTLR 240 (377)
T ss_pred ccc-CccccCceEEEecCceeccCCCCceEEEEEeCHHHHHH-HH-HH-HHHhCC----------CCCH---HHHHHHHh
Confidence 763 23356899999999999877654 4777777765543 11 01 000111 1111 11122233
Q ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCC-CcCCCc--------------ccccceEEEEcCCccccCChhhHHHH
Q 012991 312 FVSRFEGGIDGIMQRNHEQALKMARMLANAWGT-SLGSPP--------------EICAAMVMVGLPSRLRVMGEDDALRL 376 (452)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~l 376 (452)
-++. +..-.++.++++..+.+.|++.+.+ +++.|. ...++++.|.+++. +.....++
T Consensus 241 gl~t----l~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~----~~~~~~~~ 312 (377)
T TIGR01324 241 GLRT----LGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRL----TQKQVHAF 312 (377)
T ss_pred hhhh----HHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCC----CHHHHHHH
Confidence 3332 2333666778888899999988766 344441 13478899988510 12346678
Q ss_pred HHHHhhhcceEeeecccCCCCCCCCCC--CC---CCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 377 RGHLRVRFGVEVPIHYQAPKDDGQPQA--GA---RDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 377 ~~~L~~~~gI~v~~~~~~~~~~~~~~~--~~---~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
.+.|. .+++.+..+....- ..+.. .. +...+..++.+|+|++. ||.+.+++.|.+.++
T Consensus 313 ~~~l~-~~~~~~slG~~~sl--~~~~~~~~~~~~~~~~~~~~~liR~svGl----E~~~dl~~dl~~al~ 375 (377)
T TIGR01324 313 LDHLQ-LFGLGYSWGGYESL--ALCNQPELGHRPNIKRNLEGPLIRVHIGL----ENVDDLKADLKAGFE 375 (377)
T ss_pred HHhCC-cceEeccCCCccce--eecCCCCCCHHHHHhccCCCCEEEEEeCC----CCHHHHHHHHHHHHh
Confidence 88884 35676644322100 00000 00 01113345799999985 455666666665553
No 194
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=1.4e-22 Score=185.47 Aligned_cols=348 Identities=14% Similarity=0.094 Sum_probs=240.3
Q ss_pred CCeEEeccCCCC-----CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCC-----CCCcEEEecCh
Q 012991 38 HGVARINNGSFG-----SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINAD-----DVGEISLVDNA 107 (452)
Q Consensus 38 ~~~~~l~~~~~~-----~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-----~~~~i~~t~g~ 107 (452)
+.++.|..|.++ ++...+.+|+.+.+..- ...+|.+..+...+|+++|++++-+ ..+.|++|+|.
T Consensus 61 k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sg-----k~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC 135 (447)
T KOG0259|consen 61 KPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSG-----KGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGC 135 (447)
T ss_pred ceeccCCCCCCCccccccCCHHHHHHHHHHHhcC-----CCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccc
Confidence 478899887765 35566777777766431 2245777888999999999997632 36799999999
Q ss_pred hHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhcccc
Q 012991 108 TTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKK 186 (452)
Q Consensus 108 t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~ 186 (452)
++|+.+++.+|+ +||..|++++|.|+-. ... |...|.+++.+++ =++.+..+ ++.+|+.+
T Consensus 136 ~qAIe~~i~~LA--------~p~aNILlPrPGfp~Y-~~~---a~~~~lEVR~ydl--LPe~~weIDL~~veal~----- 196 (447)
T KOG0259|consen 136 SQAIELAISSLA--------NPGANILLPRPGFPLY-DTR---AIYSGLEVRYYDL--LPEKDWEIDLDGVEALA----- 196 (447)
T ss_pred hHHHHHHHHHhc--------CCCCceecCCCCCchH-HHh---hhhcCceeEeecc--cCcccceechHHHHHhh-----
Confidence 999999999984 8999999999999854 333 5667999999976 22344555 99999999
Q ss_pred CCCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEeccccc---CCccc----cccccCccEEEEcCcccCc
Q 012991 187 DGKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAM---GSIKI----DVKEIGADFYVSNLHKWFF 256 (452)
Q Consensus 187 ~~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~---g~~~~----~~~~~~~d~~~~s~~K~l~ 256 (452)
.++|.++++.+|+||.|.+++ +++|+++|+++++ ++|.|+++.. |..++ .+...-+.+...+.+|. +
T Consensus 197 -DENT~AivviNP~NPcGnVys~~HL~kiae~A~klgi-~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKr-W 273 (447)
T KOG0259|consen 197 -DENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGI-MVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKR-W 273 (447)
T ss_pred -ccCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCC-eEEehhhcceeecCCCCccchhhccccCceEeecccccc-c
Confidence 789999999999999999997 7799999999999 8999998753 22222 12223355666789996 5
Q ss_pred CCCC--cEEEEEec--CccccCCCCCceeccCCCCccccc-ccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHH
Q 012991 257 CPPS--VAFLYCRK--SILSSDMHHPVVSHEFGNGLPIES-AWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQA 331 (452)
Q Consensus 257 g~~G--~G~l~~~~--~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~ 331 (452)
--+| +|++...+ ..+.. ...- .+ ..+. .....|....+.|+...++.-.+ +-++....-++.++
T Consensus 274 ~VPGWRlGWi~~hD~~gvf~~----~~~~--q~---~~~~~~~~~~p~TiiQ~AlP~IL~kTp~--efF~k~~~~lk~na 342 (447)
T KOG0259|consen 274 IVPGWRLGWIALHDPRGVFRD----TKVV--QG---IKNFLDIIPGPATIIQGALPDILEKTPE--EFFDKKLSFLKSNA 342 (447)
T ss_pred ccCCceeeeEEEecccccccc----hHHH--HH---HHHHHhccCCccHhHHHHhHHHHHhChH--HHHHHHHHHHHhhH
Confidence 5556 78887753 22221 1000 00 0000 01122333333333333332221 24666677788899
Q ss_pred HHHHHHHHHHcCCC-cCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCC
Q 012991 332 LKMARMLANAWGTS-LGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDG 410 (452)
Q Consensus 332 ~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~ 410 (452)
+..++.|.++|++. ...|++ ..++++.+..+... +-.+..++++.|.++..+.+-++..+
T Consensus 343 ~l~y~~Lk~IP~l~cp~kPeg--~mylmv~l~~s~~~-~~~dD~dFc~kL~~Eesv~~LPG~af---------------- 403 (447)
T KOG0259|consen 343 DLCYSRLKDIPCLTCPVKPEG--CMYLMVKLNLSLFP-DIEDDVDFCQKLAREESVICLPGQAF---------------- 403 (447)
T ss_pred HHHHHHHhcCCCcccCcCCCc--ceEEEeccchhhhc-cccccHHHHHHHhhhcceEEeccccc----------------
Confidence 99999999999987 444544 56777766422111 12244578888886667776544443
Q ss_pred CccceEEecccccCCHHHHHHHHHHHHHHHhccc
Q 012991 411 IITGYARISHQVYNTLEDYEKFRDAVILLVEEGQ 444 (452)
Q Consensus 411 ~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~~~ 444 (452)
..++|+|+++.. ..+.++..+++|+++.++-+
T Consensus 404 ~~~nw~Ri~i~~--~~~~leea~~Rik~Fc~RH~ 435 (447)
T KOG0259|consen 404 GLKNWLRIVITV--EEEMLEEAFSRIKEFCDRHS 435 (447)
T ss_pred cCCCeEEEEEcc--ChHHHHHHHHHHHHHHHhhh
Confidence 457899999985 67889999999999987644
No 195
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.92 E-value=3.1e-23 Score=202.12 Aligned_cols=312 Identities=13% Similarity=0.098 Sum_probs=201.8
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|++...+....++++++++.+. +.+++++||++|+..++.++ +++||+|+++++.|.+....+.....+
T Consensus 55 Y~r~~npt~~~Le~~iA~le~~---~~~~~~~sG~~Ai~~~l~al--------l~~GD~Vvv~~~~Y~~t~~l~~~~l~~ 123 (394)
T PRK09028 55 YGRRGTPTHFAFQAAIVELEGG---AGTALYPSGAAAISNALLSF--------LKAGDHLLMVDSCYEPTRDLCDKILKG 123 (394)
T ss_pred ecCCCCchHHHHHHHHHHHhCC---CcEEEECCHHHHHHHHHHHH--------hCCCCEEEEECCCcHHHHHHHHHhhhh
Confidence 4443344567899999999876 47889999999999999877 589999999999998876655444466
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|+++..++ .++ .+.+++++ .++|++|++++|+||+|.+.|+++|+++||++|+ ++++|++++.+
T Consensus 124 ~Gi~v~~v~----~~~----~e~l~~~l------~~~TklV~lespsNPtg~v~dl~~I~~la~~~g~-~lvvD~t~a~p 188 (394)
T PRK09028 124 FGIETTYYD----PMI----GEGIRELI------RPNTKVLFLESPGSITMEVQDVPTLSRIAHEHDI-VVMLDNTWASP 188 (394)
T ss_pred cceEEEEEC----CCC----HHHHHHhc------CcCceEEEEECCCCCCCcHHHHHHHHHHHHHcCC-EEEEECCcccc
Confidence 799988873 222 36678888 5789999999999999999999999999999999 79999999887
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHH
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVT 311 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 311 (452)
.. .+...+|+|+++.|.+||++|+.. .|+++.+++.... +. .. .. ..|.. .+-..+.-
T Consensus 189 ~~-~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~-l~-~~-~~-----------~~G~~-----~~p~~a~l 248 (394)
T PRK09028 189 IN-SRPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQ-LR-EH-SY-----------LMGQC-----TSPDDVYL 248 (394)
T ss_pred cc-CCccccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHH-HH-HH-HH-----------hcCCC-----CCHHHHHH
Confidence 53 333456999999999999877754 4555555544332 10 00 00 01211 11112222
Q ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCC-CcCCCc--------------ccccceEEEEcCCccccCChhhHHHH
Q 012991 312 FVSRFEGGIDGIMQRNHEQALKMARMLANAWGT-SLGSPP--------------EICAAMVMVGLPSRLRVMGEDDALRL 376 (452)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~l 376 (452)
.++.+ +.+.--.++..+++..+.+.|++.|.+ +|..|. ...++++.|.++.. +.....++
T Consensus 249 ~~rgl-~TL~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~----~~~~~~~f 323 (394)
T PRK09028 249 AMRGL-RTLGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQG----DPKAVTAL 323 (394)
T ss_pred HHccc-CcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCC----CHHHHHHH
Confidence 22210 134555677788999999999998776 344441 12478999988510 12345567
Q ss_pred HHHHhhhcceEeeecccCC-CCCCC--CCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 377 RGHLRVRFGVEVPIHYQAP-KDDGQ--PQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 377 ~~~L~~~~gI~v~~~~~~~-~~~~~--~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
.+.|. -+.+.+..+.... -.... ......+..+..++.||+|++. ||.+.+++.|.+.++
T Consensus 324 ~~~l~-l~~~~~slG~~~sLv~~p~~~~~~~~~~~~~~~~~liR~svGl----Ed~~dLi~Dl~~Al~ 386 (394)
T PRK09028 324 VEGMQ-HFKMGFSWGGFESLILGVFGINKLRTATNWDFSKPLIRLHIGL----EDVDDLIADLEAGFE 386 (394)
T ss_pred HHhCC-cceEecccCCCcceeECCCCcCccCchhhhcCCCCeEEEEeCc----CCHHHHHHHHHHHHH
Confidence 77763 2344443321110 00000 0000011113345799999985 445555555555554
No 196
>PLN02509 cystathionine beta-lyase
Probab=99.92 E-value=4.1e-23 Score=204.74 Aligned_cols=312 Identities=16% Similarity=0.180 Sum_probs=208.3
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|.+...+..+.++++++++.+.+ .+++++||++|+.+++. + +++||+|+++++.|.+....+.....+
T Consensus 127 Y~r~gnpt~~aLE~~lA~leg~e---~ai~~~SG~aAi~~il~-l--------l~~GD~VI~~~~~y~~t~~ll~~~l~~ 194 (464)
T PLN02509 127 YTRSGNPTRDALESLLAKLDKAD---RAFCFTSGMAALSAVTH-L--------IKNGEEIVAGDDVYGGSDRLLSQVVPR 194 (464)
T ss_pred cCCCCCHHHHHHHHHHHHHhCCC---EEEEeCcHHHHHHHHHH-H--------hCCCCEEEEcCCchhhHHHHHHHHHHH
Confidence 43333456899999999998874 56777888888876554 3 489999999999999887676655677
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|++++.++ ..+ .+++++++ ++++++|++++++||+|.+.|+++|+++|+++|+ ++++|++++.+
T Consensus 195 ~G~~v~~vd----~~d----~e~l~~ai------~~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~-~lIVD~A~a~~ 259 (464)
T PLN02509 195 SGVVVKRVN----TTN----LDEVAAAI------GPQTKLVWLESPTNPRQQISDIRKIAEMAHAQGA-LVLVDNSIMSP 259 (464)
T ss_pred CCeEEEEeC----CCC----HHHHHHhC------CcCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCC-EEEEECCcccc
Confidence 899999883 222 57788888 5789999999999999999999999999999999 89999999887
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHH
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVT 311 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 311 (452)
...... ..++|++++|++||+.|+.+ .|+++++++.+...+ . ...... ++. .+-...+.++.
T Consensus 260 ~~~~pl-~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~-~-~~~~~~-----------g~~--l~p~~A~l~lr 323 (464)
T PLN02509 260 VLSRPL-ELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEV-Y-FLQNSE-----------GSG--LAPFDCWLCLR 323 (464)
T ss_pred ccCChh-hcCCcEEEecCcccccCCCccceeEEEeccHHHHHHH-H-HHHHhc-----------CCC--cCHHHHHHHHh
Confidence 653332 35799999999999887665 578877655432201 0 000000 110 01111222333
Q ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc--------------ccccceEEEEcCCccccCChhhHHHH
Q 012991 312 FVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP--------------EICAAMVMVGLPSRLRVMGEDDALRL 376 (452)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~l 376 (452)
-++ .++...++..+++.++.+.|.+.|.++ |..|. ...++++.|.+. +...+..+
T Consensus 324 ~L~----tL~~R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~------~~~~~~~f 393 (464)
T PLN02509 324 GIK----TMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITG------SVALSKHL 393 (464)
T ss_pred hhh----hHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeC------CHHHHHHH
Confidence 333 244556777899999999999988763 44431 124778888773 23345677
Q ss_pred HHHHhhhcceEeeecccC-----CCCCCCCCCC--CCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhcc
Q 012991 377 RGHLRVRFGVEVPIHYQA-----PKDDGQPQAG--ARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEEG 443 (452)
Q Consensus 377 ~~~L~~~~gI~v~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~~ 443 (452)
.+.|. -+.+.+..+... +....+.... .+++.+..++.||+|++ .||++.+++.|++.++.+
T Consensus 394 ~~~l~-l~~~a~slG~~~SLi~~p~~~sh~~~~~~~~~~~Gi~~~liRlSvG----lE~~~DLi~Dl~~Al~~~ 462 (464)
T PLN02509 394 VETTK-YFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAG----IEDVDDLISDLDIAFRTG 462 (464)
T ss_pred HHcCC-cceEcccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHccc
Confidence 77773 344444332211 0000000000 01122456789999998 467888888888887654
No 197
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.92 E-value=5.3e-23 Score=202.52 Aligned_cols=310 Identities=16% Similarity=0.181 Sum_probs=201.0
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|.+...+..++++++++++.|.+ +. ++++||++|+.+++.++ +++||+|+++.+.|.+....+..++..
T Consensus 54 y~R~~~p~~~~Le~~lA~l~g~~--~~-v~~~sG~~Ai~~~l~al--------l~pGD~Vvv~~p~Y~~t~~~~~~~~~~ 122 (405)
T PRK08776 54 YTRSGNPTRDLLGEALAELEGGA--GG-VITATGMGAINLVLNAL--------LQPGDTLVVPHDAYGGSWRLFNALAKK 122 (405)
T ss_pred ccCCCChHHHHHHHHHHHHhCCC--ce-EEEcCHHHHHHHHHHHH--------hCCCCEEEEccCCchHHHHHHHHHHHh
Confidence 44455566788999999999984 44 56677789999999876 589999999999999877777766677
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|.++..++ ..+ .+++++.+ .+++++|++++++||+|.+.++++|+++|+++|+ ++++|++++.+
T Consensus 123 ~g~~v~~v~----~~d----~~~l~~~i------~~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi-~vIvD~a~a~~ 187 (405)
T PRK08776 123 GHFALITAD----LTD----PRSLADAL------AQSPKLVLIETPSNPLLRITDLRFVIEAAHKVGA-LTVVDNTFLSP 187 (405)
T ss_pred cCcEEEEEC----CCC----HHHHHHhc------CcCCeEEEEECCCCCCCccCCHHHHHHHHHHcCC-EEEEECCCccc
Confidence 788888884 222 57788888 4689999999999999999999999999999999 89999999876
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEEec-CccccCCCCCceeccCCCCcccccccccccCccccccHHHHH
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRK-SILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAV 310 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 310 (452)
.....+ .+++|++++|++|+++|+.+ .|+++.++ ++.++ +. .. ....| ...+. ......+
T Consensus 188 ~~~~pl-~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~-l~-~~-~~~~g----------~~~s~---~~a~l~~ 250 (405)
T PRK08776 188 ALQKPL-EFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQ-LV-WW-ANALG----------LTGSP---FDAFLTL 250 (405)
T ss_pred ccCCcc-cccCCEEEecCceeecCCCCceEEEEEeCCHHHHHH-HH-HH-HHhcC----------CCCCH---HHHHHHH
Confidence 542222 35899999999999777654 47666654 33332 11 00 00000 11111 1112222
Q ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc--------------ccccceEEEEcCCccccCChhhHHH
Q 012991 311 TFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP--------------EICAAMVMVGLPSRLRVMGEDDALR 375 (452)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (452)
.-++ -++...++..+++..+.+.|++.+.+. |..|. ...++++.|.+.. +.....+
T Consensus 251 ~gl~----tl~~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~-----~~~~~~~ 321 (405)
T PRK08776 251 RGLR----TLDARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEG-----GEAAVRA 321 (405)
T ss_pred hhhC----cHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcC-----CHHHHHH
Confidence 2222 345567778889999999999887653 43331 1347899998851 1223456
Q ss_pred HHHHHhhhcceEeeecccC-----CCCCCCCCCCC--CCCCCCccceEEecccccCCHHHHHHHHHHHHHHH
Q 012991 376 LRGHLRVRFGVEVPIHYQA-----PKDDGQPQAGA--RDKDGIITGYARISHQVYNTLEDYEKFRDAVILLV 440 (452)
Q Consensus 376 l~~~L~~~~gI~v~~~~~~-----~~~~~~~~~~~--~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~ 440 (452)
+.+.|. -+.+.+..+... +....+..... ++..+..++.||+|++.- |++.+++.|++.+
T Consensus 322 f~~~l~-l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liR~svGlE----~~~dli~dl~~al 388 (405)
T PRK08776 322 FVDGLR-YFTLAESLGGVESLIAHPASMTHAAMTAEARAAAGISDGLLRLSVGIE----SAEDLLIDLRAGL 388 (405)
T ss_pred HHHhCC-cceEccCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEeCcC----CHHHHHHHHHHHH
Confidence 777763 234443222110 00000111110 112255678999999863 3444444444444
No 198
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.92 E-value=1.1e-22 Score=201.33 Aligned_cols=329 Identities=15% Similarity=0.179 Sum_probs=210.2
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|++...+..+++++.++++.|.. ..++|+|||+|+++++.++ +++||+||++..+|.+....+.....+
T Consensus 58 y~R~~~p~~~~le~~lA~l~g~~---~av~~sSGt~Al~~al~~l--------l~~Gd~Vi~~~~~y~~t~~~~~~~l~~ 126 (433)
T PRK08134 58 YSRISNPTVAVLEERVAALEGGV---GAIATASGQAALHLAIATL--------MGAGSHIVASSALYGGSHNLLHYTLRR 126 (433)
T ss_pred eecCcChHHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHH--------hCCCCEEEEeCCccHHHHHHHHHHHhh
Confidence 44444567899999999999985 4689999999999999876 488999999999999887777665577
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|++++++++ ++ +++++++| +++|++|++++++||+|.+.|+++|+++|+++|+ ++++|++++.|
T Consensus 127 ~Gi~v~~vd~----~d----~~~l~~~i------~~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi-~livD~t~a~~ 191 (433)
T PRK08134 127 FGIETTFVKP----GD----IDGWRAAI------RPNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGV-PLLVDSTFTTP 191 (433)
T ss_pred CCeEEEEECC----CC----HHHHHHhc------CCCCeEEEEECCCcccCcccCHHHHHHHHHHcCC-EEEEECCCccc
Confidence 8999999943 32 68899999 6889999999999999999999999999999999 89999999988
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEEe-cCcccc------CCCCCceeccCCCCccc---------ccccc
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCR-KSILSS------DMHHPVVSHEFGNGLPI---------ESAWI 295 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~-~~~~~~------~l~~~~~~~~~~~~~~~---------~~~~~ 295 (452)
....+. .+++|++++|.|||+ +++| +|.+++. ...... .+..+...+ .+..... .....
T Consensus 192 ~~~~pl-~~GaD~vv~S~tK~l-~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~ 268 (433)
T PRK08134 192 YLLRPF-EHGADLVYHSATKFL-GGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGF-HGMVFAEESTVAAFLLRARRE 268 (433)
T ss_pred ccCCch-hcCCCEEEecccccc-CCCCCceEEEEEecCccccccccccccccCCcccc-cccchhhccchhHHHHHHHHH
Confidence 775544 678999999999985 5555 4555443 221100 011111100 0000000 00000
Q ss_pred cccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc---------------ccccceEEE
Q 012991 296 GTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP---------------EICAAMVMV 359 (452)
Q Consensus 296 ~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~---------------~~~~~~~~~ 359 (452)
+........+...|...+..+ +.+....++..+++..+.+.|++.+.+. |..|. ...++++.|
T Consensus 269 ~~~~~G~~ls~~~A~l~~~gL-~tl~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~~g~gg~~s~ 347 (433)
T PRK08134 269 GLRDFGACLSPMNAWQLLQGI-ETLPLRMERHVANTRKVVAFLASHPAVARVAHPELESHPDHALAKRLLPRGAGSVFSF 347 (433)
T ss_pred HHHhcCCCCCHHHHHHHhcCC-CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEE
Confidence 111111122223333333321 2456667777888999999999887663 33321 124788999
Q ss_pred EcCCccccCChhhHHHHHHHHhhhcceEeeecccC-----CCCCCCCCCC--CCCCCCCccceEEecccccCCHHHHHHH
Q 012991 360 GLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQA-----PKDDGQPQAG--ARDKDGIITGYARISHQVYNTLEDYEKF 432 (452)
Q Consensus 360 ~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~iRis~~~~~t~~di~~l 432 (452)
.++. +...+.++.+.|. -+.+.+..+... +....+.... .+++.+..++.||+|++. ||.+.+
T Consensus 348 ~l~~-----~~~~~~~f~~~l~-l~~~~~slG~~~sL~~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGl----E~~~dl 417 (433)
T PRK08134 348 DLKG-----GRAAGRKFIESLK-LFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGEGTIRLSIGL----EDADDL 417 (433)
T ss_pred EecC-----CHHHHHHHHHhCC-cceeccccCCCCceeeCCCccCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHH
Confidence 8851 1234567777773 234333221110 0000000000 011235667899999985 445555
Q ss_pred HHHHHHHHhc
Q 012991 433 RDAVILLVEE 442 (452)
Q Consensus 433 ~~~l~~~~~~ 442 (452)
++.|.+.++.
T Consensus 418 i~dl~~Al~~ 427 (433)
T PRK08134 418 IDDLKRALKA 427 (433)
T ss_pred HHHHHHHHHh
Confidence 5555555543
No 199
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.92 E-value=9.7e-23 Score=187.10 Aligned_cols=357 Identities=13% Similarity=0.116 Sum_probs=255.7
Q ss_pred CCHHHHHhhhccC--------CCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCch-hhhhhhhHHHHHHHHHHHhHh
Q 012991 24 ISEAEIRDEFSHH--------QHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDD-FYFNSLRKGILESRAAVKDLI 93 (452)
Q Consensus 24 ~~~~~ir~~~~~~--------~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~ 93 (452)
.+++.+.++||.- .+-.+|+.+...+ ...+.|.+++.+.+.......+. .+-.+....-.++++.+|++.
T Consensus 150 k~vNRlA~~fP~A~~~se~t~k~VtVWCSNDYLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LH 229 (570)
T KOG1360|consen 150 KNVNRLAKEFPLAHRYSEATEKKVTVWCSNDYLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLH 229 (570)
T ss_pred HHHhHhhhhccchhhccccccCceEEEecCccccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHh
Confidence 3466777788851 1235577766666 44455999999998876433222 122333445678999999999
Q ss_pred CCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH
Q 012991 94 NADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI 173 (452)
Q Consensus 94 ~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 173 (452)
+-+ ..++| ++.--|+...+.+|++ .-||-+|+.+...|.|...+++. .++.-..+ ..++
T Consensus 230 qK~--aALlF-sSCfVANDstLftLak------~lpgcei~SD~gNHASMI~GIrn----s~v~K~IF----rHND---- 288 (570)
T KOG1360|consen 230 QKE--AALLF-SSCFVANDSTLFTLAK------KLPGCEIFSDEGNHASMIQGIRN----SRVPKHIF----RHND---- 288 (570)
T ss_pred cCc--ceeee-eeeeeccchHHHHHHH------HCCCcEEeccccchHHHHHHhhh----cCCcceee----ccCC----
Confidence 875 44444 4555677777888864 34788899999999998888754 35544444 4444
Q ss_pred HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccc--------cccccCcc
Q 012991 174 INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKI--------DVKEIGAD 245 (452)
Q Consensus 174 ~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~--------~~~~~~~d 245 (452)
++.|++.+++.. ...||+|.|+..++++|.++|+++|.+++++||+ +.++|++|+.|.... |-.-...|
T Consensus 289 ~~hL~~lL~~~~--~svPKivAFEtVhSM~GavcpleelcDvah~yGA-iTFlDEVHAVGlYG~rGaGvgerdGvm~kvD 365 (570)
T KOG1360|consen 289 LDHLEQLLQSSP--KSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGA-ITFLDEVHAVGLYGPRGAGVGERDGVMHKVD 365 (570)
T ss_pred HHHHHHHHHhCC--CCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCc-eeeeehhhhhccccCCCCCccccCCcchhhh
Confidence 788888887653 3568999999999999999999999999999999 899999998876421 11112479
Q ss_pred EEEEcCcccCcCCCCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHH
Q 012991 246 FYVSNLHKWFFCPPSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQ 325 (452)
Q Consensus 246 ~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~ 325 (452)
++++++.|. +|-.| |++.....+++. +..+ .. .+.++.+.+..-+.+..++++.+.. ++| ..+++
T Consensus 366 iIsGTLgKa-fGcVG-GYIAat~~LvDm--iRSy-----Aa----GFIFTTSLPP~vl~GAleaVr~lk~-~eg-~~lR~ 430 (570)
T KOG1360|consen 366 IISGTLGKA-FGCVG-GYIAATRKLVDM--IRSY-----AA----GFIFTTSLPPMVLAGALEAVRILKS-EEG-RVLRR 430 (570)
T ss_pred hcccchhhh-ccccc-ceehhhhhHHHH--HHHh-----cC----ceEEecCCChHHHHhHHHHHHHHhh-hhh-HHHHH
Confidence 999999997 77776 888888888874 2222 11 1223344444455666778888875 234 45666
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCC
Q 012991 326 RNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGA 405 (452)
Q Consensus 326 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~ 405 (452)
..+++..++++.|.++ |+.+...+ +.++-+.+. +..-+.++++.|..++||++.....+..
T Consensus 431 ~hqrnv~~~kq~l~~~-GiPVi~~p---SHIiPv~vg------da~l~~~~sd~Li~~h~iYvQaINyPTV--------- 491 (570)
T KOG1360|consen 431 QHQRNVKYVKQLLMEL-GIPVIPNP---SHIIPVRVG------DAALAKQASDILISKHNIYVQAINYPTV--------- 491 (570)
T ss_pred HHHHHHHHHHHHHHHc-CCcccCCC---cceeeeecc------CHHHHHHHHHHHHHhcCeEEEeccCCcc---------
Confidence 6788999999999887 88765444 347666664 3456678999999999999977655533
Q ss_pred CCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 406 RDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 406 ~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
..+...+||.+..++|++-++.+++.|..+..+
T Consensus 492 ----~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~ 524 (570)
T KOG1360|consen 492 ----ARGTERLRIAPTPHHTPQMMNILVNALLDVWNE 524 (570)
T ss_pred ----cccceeeecCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 245668999999999999999999999888764
No 200
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=8.1e-23 Score=197.91 Aligned_cols=311 Identities=14% Similarity=0.141 Sum_probs=205.5
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHH
Q 012991 37 QHGVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVL 115 (452)
Q Consensus 37 ~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~ 115 (452)
+...++|+.+.+. +.|+.+.+++.+.+... .... |. ..+..++|++++++++++ +++|++|+|+++++..++
T Consensus 17 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--Y~-~~g~~~lr~~ia~~~~~~-~~~I~~t~G~~~~l~~~~ 89 (337)
T PRK03967 17 GNYRIWLDKNENPFDLPEELKEEIFEELKRV---PFNR--YP-HITSDPLREAIAEFYGLD-AENIAVGNGSDELISYLV 89 (337)
T ss_pred CCceEEecCCCCCCCCCHHHHHHHHHHhhcC---cccc--CC-CCCHHHHHHHHHHHhCcC-cceEEEcCCHHHHHHHHH
Confidence 3467899888766 56677888887765321 1111 22 235788999999999986 799999999999998877
Q ss_pred HHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEE
Q 012991 116 QQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLA 194 (452)
Q Consensus 116 ~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv 194 (452)
.+ + +||+|+++.|.|...... ++..|.+++.+++ +++..+ ++.+++.+ .+++++
T Consensus 90 ~~---------~-~gd~V~v~~P~y~~~~~~----~~~~g~~~~~v~~----~~~~~~d~~~l~~~~-------~~~~~v 144 (337)
T PRK03967 90 KL---------F-EGKHIVITPPTFGMYSFY----AKLNGIPVIDVPL----KEDFTIDGERIAEKA-------KNASAV 144 (337)
T ss_pred HH---------h-CCCeEEEeCCChHHHHHH----HHHcCCeEEEeec----CCCCCcCHHHHHHhc-------cCCCEE
Confidence 63 2 689999999999754332 4567999999965 223334 67777654 467899
Q ss_pred EEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCc-c-cc-ccccCccEEEEcCcccCcCCCC--cEEEEEecC
Q 012991 195 IIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSI-K-ID-VKEIGADFYVSNLHKWFFCPPS--VAFLYCRKS 269 (452)
Q Consensus 195 ~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~-~-~~-~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~ 269 (452)
++++|+||||.+++.++|.++++ +++ ++|+|++++.... . .. .....-.+++.|++|. +|.+| +|+++++++
T Consensus 145 ~~~~P~NPtG~~~~~~~l~~i~~-~~~-~ii~De~y~~~~~~~~~~~~~~~~~vi~l~S~SK~-~~l~GlRiG~iv~~~~ 221 (337)
T PRK03967 145 FICSPNNPTGNLQPEEEILKVLE-TGK-PVVLDEAYAEFSGKSLIGLIDEYPNLILLRTFSKA-FGLAGIRAGYAIANEE 221 (337)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHh-cCC-EEEEECchhhhcccchHHHHhhCCCEEEEecchHh-hcchhhhheeeecCHH
Confidence 99999999999999999999995 699 7999999863211 0 01 1111224677899996 67666 899999887
Q ss_pred ccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCC
Q 012991 270 ILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSP 349 (452)
Q Consensus 270 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 349 (452)
+++. +. .... ..+.+...+.++..+++... -..+.+++..+.++.+.+.|.+. ..+
T Consensus 222 ~i~~-~~-~~~~-------------~~~~~~~~q~~~~~~l~~~~----~~~~~~~~~~~~r~~l~~~L~~~-----~~~ 277 (337)
T PRK03967 222 IIDA-LY-RIKP-------------PFSLNILTMKIVRLALDHYD----LIEERIDYIIKERERVRRELGEY-----AYP 277 (337)
T ss_pred HHHH-HH-hhcC-------------CCCCCHHHHHHHHHHHhCHH----HHHHHHHHHHHHHHHHHHHhccC-----cCC
Confidence 7765 21 1100 01222233333333332211 12223334455556666666542 123
Q ss_pred cccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHH
Q 012991 350 PEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDY 429 (452)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di 429 (452)
++ ++++|+.+ .+.+.|.++ ||.++.... ...+++|++++ +.++.
T Consensus 278 ~~--~~~~~~~~-------------~~~~~l~~~-gi~v~~~~~-----------------~~~~~~Ri~~~---~~~~~ 321 (337)
T PRK03967 278 SD--ANFLLLKL-------------DAYDYLLEN-GIVVRKLSG-----------------RLEGHIRVTVG---KREEN 321 (337)
T ss_pred CC--CcEEEEhH-------------HHHHHHHHC-CEEEEeCCC-----------------CCCCeEEEecC---CHHHH
Confidence 32 66777643 166777664 999974321 23469999998 78889
Q ss_pred HHHHHHHHHHHhc
Q 012991 430 EKFRDAVILLVEE 442 (452)
Q Consensus 430 ~~l~~~l~~~~~~ 442 (452)
++++++|+++.+.
T Consensus 322 ~~l~~~l~~~~~~ 334 (337)
T PRK03967 322 DEFIKALKEIKEG 334 (337)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988754
No 201
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.92 E-value=3.7e-23 Score=203.36 Aligned_cols=312 Identities=16% Similarity=0.182 Sum_probs=204.8
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|++...+..+++++++++++|.+ ..++++||++|+..++.++ +++||+|+++.+.|.+....+..++..
T Consensus 58 y~r~~~p~~~~le~~lA~l~g~~---~~i~~ssG~~Ai~~~l~al--------l~~GD~Vi~~~~~y~~~~~~~~~~~~~ 126 (398)
T PRK08249 58 YSRNTNPTVQAFEEKVRILEGAE---AATAFSTGMAAISNTLYTF--------LKPGDRVVSIKDTYGGTNKIFTEFLPR 126 (398)
T ss_pred ccCCCChHHHHHHHHHHHHhCCC---eEEEeCChHHHHHHHHHHh--------cCCCCEEEEcCCchHHHHHHHHHHHhh
Confidence 55566778899999999999984 4677788889999998876 589999999999999887777665677
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|+++..++ ..+ ++++++++ .+++++|++++++||+|.+.|+++|.++|+++|+ ++++|++++.+
T Consensus 127 ~Gi~v~~vd----~~d----~e~l~~~i------~~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi-~livD~t~a~~ 191 (398)
T PRK08249 127 MGVDVTLCE----TGD----HEQIEAEI------AKGCDLLYLETPTNPTLKIVDIERLAAAAKKVGA-LVVVDNTFATP 191 (398)
T ss_pred CCeEEEEcC----CCC----HHHHHHhc------CCCCeEEEEECCCCCCCccCCHHHHHHHHHHcCC-EEEEECCcCcc
Confidence 899988873 222 68888888 5789999999999999999999999999999999 89999999866
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHH
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVT 311 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 311 (452)
...... ..++|+++.|++|+++|+.. .|+++.++++++. + .... . ..+.. .+......+++
T Consensus 192 ~~~~~l-~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~-l-~~~~-~-----------~~g~~--~s~~~a~l~l~ 254 (398)
T PRK08249 192 INQNPL-ALGADLVIHSATKFLSGHADALGGVVCGSKELMEQ-V-YHYR-E-----------INGAT--MDPMSAYLILR 254 (398)
T ss_pred ccCCch-hhCCCEEeccCceecCCCCCceEEEEECCHHHHHH-H-HHHH-H-----------hcCCC--CCHHHHHHHHh
Confidence 532222 35789999999998654331 3666666665553 1 1110 0 00111 11111122233
Q ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc--------------ccccceEEEEcCCccccCChhhHHHH
Q 012991 312 FVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP--------------EICAAMVMVGLPSRLRVMGEDDALRL 376 (452)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~l 376 (452)
-++ .+....++..+++..+.+.|++.+.++ |..|. ...++++.|.++. +...+.++
T Consensus 255 ~l~----tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~-----~~~~~~~f 325 (398)
T PRK08249 255 GMK----TLKLRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKG-----GMDTVKRL 325 (398)
T ss_pred Ccc----hHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcC-----CHHHHHHH
Confidence 333 234445667888999999999877653 43331 1347899998851 12235567
Q ss_pred HHHHhhhcceEeeecccC-----CCCCCCCCCC--CCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 377 RGHLRVRFGVEVPIHYQA-----PKDDGQPQAG--ARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 377 ~~~L~~~~gI~v~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
.+.|. -+.+.+..+... +....+.... .++..+..++.+|+|++. ||++.+++.|.+.++.
T Consensus 326 ~~~l~-l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~ 393 (398)
T PRK08249 326 LPKLR-YAHRAANLGAVETIYGPARTTSHVENTLEERAALGIPEGLVRISVGI----EDTEDLIADLEQAFAH 393 (398)
T ss_pred HHhCC-cceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHH
Confidence 67763 234443222110 0000000000 011225567899999985 5566666666666643
No 202
>PRK06460 hypothetical protein; Provisional
Probab=99.92 E-value=4.4e-23 Score=201.80 Aligned_cols=311 Identities=17% Similarity=0.228 Sum_probs=199.2
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|++...+..+++++++++++|++ ..+++ +||++|+..++.++ +++||+|+++.+.|...+..+...++.
T Consensus 39 y~r~~~p~~~~L~~~lA~l~g~~--~~v~~-~sG~~ai~~~l~al--------~~~Gd~Vl~~~~~~~~ty~~~~~~~~~ 107 (376)
T PRK06460 39 YSREANPTVLELTKKIVELENAE--MGVAF-SSGMGAISTTALAL--------LKPGNSVLVHRDMFGRSYRFFTDYLKN 107 (376)
T ss_pred eeCCCCccHHHHHHHHHHHhCCC--cEEEe-CCHHHHHHHHHHHH--------hCCCCEEEEecCCcCcHHHHHHHHHHh
Confidence 55666778899999999999995 45544 66678999988876 589999999988887666666666777
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|+++..++ .++. +.+++.+ .+++++|++++++||+|.+.|+++|.++|+++|+ ++++|++++.+
T Consensus 108 ~G~~v~~~~----~~~~----~~l~~~~------~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~-~vivDea~~~~ 172 (376)
T PRK06460 108 WGVNVDASN----PGSD----NIIEKAK------SKRYDVVFVENITNPLLRVVDITELSKVCKENGS-ILIVDATFSTP 172 (376)
T ss_pred hCcEEEEEC----CCCH----HHHHHhc------CCCceEEEEECCCCCCCcccCHHHHHHHHHHcCC-EEEEECCcCcc
Confidence 899998884 3332 2344444 4689999999999999999999999999999999 89999998765
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHH
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVT 311 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 311 (452)
...... ..++|+++.|++|++.|..+ .|+++.++++++. +. .. ...+ +.. ..+. ....+++
T Consensus 173 ~~~~~l-~~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~-l~-~~-~~~~-----------g~~-~~~~-~a~~~l~ 235 (376)
T PRK06460 173 INQKPL-ELGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNV-ID-QM-RRTL-----------GTS-LDPH-AAYLTLR 235 (376)
T ss_pred ccCChh-hcCCCEEEeecceeccCCCCceEEEEecCHHHHHH-HH-HH-HHhc-----------CCC-CCHH-HHHHHHh
Confidence 321111 24689999999998655433 6888887776654 21 11 0001 111 1111 1112222
Q ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCC-----c---------ccccceEEEEcCCccccCChhhHHHH
Q 012991 312 FVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSP-----P---------EICAAMVMVGLPSRLRVMGEDDALRL 376 (452)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~-----~---------~~~~~~~~~~~~~~~~~~~~~~~~~l 376 (452)
-+. .++..++++.+++.++.+.|++.+.++ +..| + ...++++.|.+.. +..+..++
T Consensus 236 ~~~----~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~-----~~~~~~~~ 306 (376)
T PRK06460 236 GIK----TLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNG-----GQESALKV 306 (376)
T ss_pred chh----hHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC-----cHHHHHHH
Confidence 222 245557778899999999999887653 4333 1 1358899998851 12345566
Q ss_pred HHHHhhhcceEeeec-ccC----CCCCCCCCCC--CCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 377 RGHLRVRFGVEVPIH-YQA----PKDDGQPQAG--ARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 377 ~~~L~~~~gI~v~~~-~~~----~~~~~~~~~~--~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
.+.|. -+.+.+..+ ..+ +....+.... .+++.+..++.||+|++. ||.+.+++.|++.++
T Consensus 307 ~~~l~-~~~~~~s~Gg~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 373 (376)
T PRK06460 307 MKSLK-LIIPAQTLGGVNSVISHPATMSHRTLSLEERKIVGITDSLLRLSVGI----EDVNDLIEDLDRALS 373 (376)
T ss_pred HHhCC-cceeccCCCCCceEEeCccccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHH
Confidence 66662 223332221 110 0000000000 011225567899999985 556666666666553
No 203
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.92 E-value=1.1e-22 Score=196.85 Aligned_cols=269 Identities=16% Similarity=0.176 Sum_probs=185.9
Q ss_pred HHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEe
Q 012991 83 LESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQ 162 (452)
Q Consensus 83 ~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~ 162 (452)
.++++++++++|++++++|++|+|+++++.++.. + +++|+ |++..|.|+.....+ +..|.+++.++
T Consensus 56 ~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~~-~--------~~~g~-v~v~~P~y~~y~~~~----~~~g~~~~~v~ 121 (339)
T PRK06959 56 DGLAACAARYYGAPDAAHVLPVAGSQAAIRALPA-L--------LPRGR-VGIAPLAYSEYAPAF----ARHGHRVVPLD 121 (339)
T ss_pred HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHHH-h--------cCCCe-EEEcCCCcHHHHHHH----HHCCCEEEeec
Confidence 7899999999999755899999999999986654 2 36666 888999998865555 44699998884
Q ss_pred CCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHH---HHHcCCCEEEEecccccCCccccc
Q 012991 163 LPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKI---CRDEGVDQVFVDAAHAMGSIKIDV 239 (452)
Q Consensus 163 ~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l---~~~~~~~~~ivD~a~~~g~~~~~~ 239 (452)
. +. ..+ ...++++++++|+||||.+++.+++.++ |++++. ++|+|+++........+
T Consensus 122 ~----~~---------~~~------~~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~-~vI~DEay~~~~~~~s~ 181 (339)
T PRK06959 122 E----AA---------DTL------PAALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGG-TLIVDEAFADTLPAASL 181 (339)
T ss_pred c----cc---------hhc------cccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCC-EEEEECCCccCCCcccc
Confidence 3 21 112 2345689999999999999998776665 567789 69999998653321111
Q ss_pred c---ccCccEEEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHH
Q 012991 240 K---EIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVS 314 (452)
Q Consensus 240 ~---~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~ 314 (452)
. ...--+++.|++|. +|.+| +|++++++++++. +. .... ..+.+...+.++.++++..
T Consensus 182 ~~~~~~~~vi~l~SfSK~-~gl~GlRiGy~v~~~~li~~-l~-~~~~-------------~~~vs~~~q~a~~~~L~~~- 244 (339)
T PRK06959 182 AAHTDRPGLVVLRSVGKF-FGLAGVRAGFVLAAPALLAA-LR-DALG-------------AWTVSGPARHAVRAAFADA- 244 (339)
T ss_pred hhccCCCCEEEEecChhh-cCCcchheEEEecCHHHHHH-HH-HhcC-------------CCCCcHHHHHHHHHHhCcH-
Confidence 1 11223778899995 77777 7999998887765 21 1100 0111222333333333321
Q ss_pred HhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccC
Q 012991 315 RFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQA 394 (452)
Q Consensus 315 ~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~ 394 (452)
. -.+..++++++.++++.+.|.++ ++.+.. . ++++|+.++ +..++.+.|.++ ||.++..
T Consensus 245 ~---~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~--~--~~f~~~~~~---------~~~~l~~~l~~~-GI~vr~~--- 303 (339)
T PRK06959 245 A---WQAAMRERLAADGARLAALLRAH-GFAVHA--T--PLFSWTDDP---------RAAALHAALARR-GIWTRYF--- 303 (339)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHHC-CCCccC--c--ceEEEEeCC---------CHHHHHHHHHhC-CeEEEEC---
Confidence 1 24567788888899999999887 666542 1 567777664 456788998775 9999632
Q ss_pred CCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 395 PKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
...+++||++.. +.+|+++++++|+++++
T Consensus 304 ----------------~~~~~lRisi~~--~~~e~~~l~~al~~~~~ 332 (339)
T PRK06959 304 ----------------APPPSVRFGLPA--DEAEWQRLEDALAECVP 332 (339)
T ss_pred ----------------CCCCeEEEECCC--CHHHHHHHHHHHHHHHH
Confidence 113599999953 78899999999998875
No 204
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.92 E-value=1.3e-22 Score=210.53 Aligned_cols=320 Identities=18% Similarity=0.202 Sum_probs=218.7
Q ss_pred hhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCC-CCCEEEEeCCcchhHHHHHHHHHHhc
Q 012991 76 NSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFH-RNDTVLMLHCAFQAVKKSIQAYVTRA 154 (452)
Q Consensus 76 ~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~-~g~~Vl~~~~~~~s~~~~~~~~a~~~ 154 (452)
.+..+.+.++++.+++++|.+ ..-+..++|+.+...++.++ |.|.+..-+ .+++|+++..+|+++... +...
T Consensus 539 QG~lq~i~elq~~l~eLtGmd--~~Sl~p~sGA~gE~A~Lmai-r~yh~~~Ge~~r~~vLIp~saHgtNpas----a~~~ 611 (954)
T PRK12566 539 EGYRAMIDELEAWLCAITGFD--AICMQPNSGAQGEYAGLLAI-RRYHRSRGQSQRDICLIPSSAHGTNPAS----AQMA 611 (954)
T ss_pred cCHHHHHHHHHHHHHHHHCCC--eEeecCCchHHHHHHHHHHH-HHHHHhcCCCCCCEEEecccccccCHHH----HHHC
Confidence 556778899999999999995 22334446777776777765 332211112 246889999999888654 3557
Q ss_pred CcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 155 GGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 155 g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
|.+++.+ +.++++.+ +++|++.+++. ..++.+|+++++++..+...|+++|.++||++|+ ++++|+++..+
T Consensus 612 GieVv~V----p~D~~G~iDle~L~a~I~~~---~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Ga-lv~vDgA~~~a 683 (954)
T PRK12566 612 GMRVVIV----ECDPDGNVDLDDLKAKAAAA---GDRLSCLMITYPSTHGVYEEGIREICEVVHQHGG-QVYMDGANLNA 683 (954)
T ss_pred CCEEEEe----ccCCCCCcCHHHHHHHhhcc---CCCEEEEEEEecCcCceecchHHHHHHHHHHcCC-EEEEEeeChhh
Confidence 9999999 45556666 99999999533 4688999999998876666779999999999999 89999999887
Q ss_pred Ccccc-ccccCccEEEEcCcccCcCCCCcEEEEEec-CccccCCCCCceeccCC----CCcccccccccccCc---cccc
Q 012991 234 SIKID-VKEIGADFYVSNLHKWFFCPPSVAFLYCRK-SILSSDMHHPVVSHEFG----NGLPIESAWIGTRDY---SAQL 304 (452)
Q Consensus 234 ~~~~~-~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~-~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~---~~~~ 304 (452)
...++ ...+|+|++++++|||+++|.|.|..++.+ ...+. ..+++..+.+ +..+. .++.+. .+..
T Consensus 684 ~~~l~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~--L~pfLp~~P~~d~~G~~~r----~ga~S~~~~gsa~ 757 (954)
T PRK12566 684 QVGLARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAH--LAPFVANHPVVPVEGPDPN----NGAVSAAPWGSAS 757 (954)
T ss_pred ccCCCChhhcCCCEEEecCCcccCcCccCCCCccchhhhhhh--hhhhccCCCCcCCCCCCCC----CCceeecccchHH
Confidence 77776 578899999999999998888877666555 33332 1112111111 11010 122222 2223
Q ss_pred cHHHHHHHHHHhhcCHHHHHH-H--HHHHHHHHHHHHHHHcCCCcCCCcc-cccceEEEE---cCCccccCChhhHHHHH
Q 012991 305 VIPSAVTFVSRFEGGIDGIMQ-R--NHEQALKMARMLANAWGTSLGSPPE-ICAAMVMVG---LPSRLRVMGEDDALRLR 377 (452)
Q Consensus 305 ~~~~al~~~~~~~~g~~~~~~-~--~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~l~ 377 (452)
.+..++.++..+ |.+ +++ . ...+++|+.+.|.+..++.. .+.. .+..-..+. +++ ..+.+..++.
T Consensus 758 ~l~~A~~Yi~~l--G~e-Lk~aa~~ailnAnYla~rL~~~~~v~~-~~~~~~~~hEfii~~~~l~~----~~g~~~~dva 829 (954)
T PRK12566 758 ILPISWMYIAMM--GPQ-LADASEVAILSANYLANQLGGAFPVLY-RGRNERVAHECILDLRPLKA----QTGISEEDVA 829 (954)
T ss_pred HHHHHHHHHHHH--CHH-HHHHHHHHHHHHHHHHHHhHhhCCCCc-CCCCCCeeeEEEEEcccccc----ccCCCHHHHH
Confidence 356677888876 776 333 2 35789999999987444433 2221 111112222 321 1235667899
Q ss_pred HHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 378 GHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 378 ~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
+.|. ++||..+..+.+ .++++|+++..+++.+|||+++++|+.+.++
T Consensus 830 kRL~-d~Gihapt~~fP-----------------v~~~LmIepTE~eskeEIDrf~eAL~~I~~e 876 (954)
T PRK12566 830 KRLM-DYGFHAPTMSFP-----------------VPGTLMVEPTESESKAELDRFVEAMLSIRAE 876 (954)
T ss_pred HHHH-HCCcEEeEEeec-----------------cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence 9997 579998764332 3579999999999999999999999999876
No 205
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.92 E-value=5.5e-23 Score=201.98 Aligned_cols=313 Identities=18% Similarity=0.212 Sum_probs=207.5
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|++...+..+++++.+|+++|.+ ..++++||++|+.+++.++ +++||+|+++.+.|.+....+...+..
T Consensus 53 y~r~~~p~~~~le~~lA~l~g~~---~av~~~sG~~Ai~~~l~al--------~~~Gd~Vi~~~~~y~~t~~~~~~~~~~ 121 (391)
T TIGR01328 53 YSRLGNPTVSNLEGRIAFLEGTE---AAVATSSGMGAIAATLLTI--------LKAGDHLISDECLYGCTFALLEHALTK 121 (391)
T ss_pred eeCCCCchHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHH--------hCCCCEEEEecCcchHHHHHHHHHHhc
Confidence 44444566889999999999985 4688888899999988876 589999999999998877777766777
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|++++.+++ ++ ++++++++ ++++++|++++++||+|.+.|+++|.++|+++|+ ++++|++++.+
T Consensus 122 ~G~~~~~vd~----~d----~e~l~~~i------~~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi-~livD~a~a~~ 186 (391)
T TIGR01328 122 FGIQVDFINM----AI----PEEVKAHI------KDNTKIVYFETPANPTMKLIDMERVCRDAHSQGV-KVIVDNTFATP 186 (391)
T ss_pred CCeEEEEECC----CC----HHHHHHhh------ccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCC-EEEEECCCchh
Confidence 8999999943 32 67888888 5789999999999999999999999999999999 79999999877
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHH
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVT 311 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 311 (452)
...... ..++|++++|++|+++|+.+ .|+++.+++++.. +. ...... ..|. ....+. ...++.
T Consensus 187 ~~~~~~-~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~-l~-~~~~~~----------~~g~-~l~~~~-a~l~l~ 251 (391)
T TIGR01328 187 MLTNPV-ALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQ-IR-MVGIKD----------MTGS-VISPFD-AWLILR 251 (391)
T ss_pred ccCCch-hcCCCEEEccccccccCCCCceEEEEEcCHHHHHH-HH-HHHHHh----------CCCC-CCCcHH-HHHHHh
Confidence 553332 34799999999998554432 4777777776654 11 100000 0011 011111 122222
Q ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc---c-----------cccceEEEEcCCccccCChhhHHHH
Q 012991 312 FVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP---E-----------ICAAMVMVGLPSRLRVMGEDDALRL 376 (452)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~---~-----------~~~~~~~~~~~~~~~~~~~~~~~~l 376 (452)
-++ .+....++..+++.++.+.|.+.++++ +..|. + ..++++.|.++. +.....++
T Consensus 252 ~L~----tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~-----~~~~~~~f 322 (391)
T TIGR01328 252 GLK----TLNIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKG-----GFAGAKKL 322 (391)
T ss_pred CcC----cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCC-----CHHHHHHH
Confidence 222 344456677888999999999887764 33331 0 237799998851 12335566
Q ss_pred HHHHhhhcceEeeecccC-----CCCCCCCCCCC--CCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 377 RGHLRVRFGVEVPIHYQA-----PKDDGQPQAGA--RDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 377 ~~~L~~~~gI~v~~~~~~-----~~~~~~~~~~~--~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
.+.|. -+.+....+... +....+..... ++..+..++.+|+|++. ||++.+++.|++.++
T Consensus 323 ~~~l~-~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 389 (391)
T TIGR01328 323 LNNLK-LIRLAVSLGDAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGL----EDADDLIADLKQALD 389 (391)
T ss_pred HHhCC-cceEecCCCCCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHh
Confidence 66663 233443332111 00000000000 11224557899999984 567777777776664
No 206
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.92 E-value=1.4e-22 Score=195.73 Aligned_cols=270 Identities=15% Similarity=0.150 Sum_probs=187.6
Q ss_pred HHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEe
Q 012991 83 LESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQ 162 (452)
Q Consensus 83 ~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~ 162 (452)
.+++++++++++. ++|++|+|+++++.+++. +.+||+|++++|+|+.....+ +..|++++.++
T Consensus 52 ~~Lr~~ia~~~~~---~~I~it~Gs~~al~~~~~----------~~~gd~v~v~~P~y~~~~~~~----~~~g~~~~~v~ 114 (330)
T PRK05664 52 DGLEAAARAYYGA---PQLLPVAGSQAAIQALPR----------LRAPGRVGVLSPCYAEHAHAW----RRAGHQVRELD 114 (330)
T ss_pred HHHHHHHHHHhCC---CCEEECcCHHHHHHHHHH----------ccCCCEEEEcCCChHHHHHHH----HHcCCeEEEec
Confidence 6789999999986 599999999999988753 378999999999999876655 44699999883
Q ss_pred CCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHH---HHHHHHHcCCCEEEEecccccCCccc--
Q 012991 163 LPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRK---LVKICRDEGVDQVFVDAAHAMGSIKI-- 237 (452)
Q Consensus 163 ~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~---i~~l~~~~~~~~~ivD~a~~~g~~~~-- 237 (452)
+ +++++.+ .+++++++++|+||||.+++.++ |+++|+++++ ++|+|+++.......
T Consensus 115 ~-----------~~~~~~~-------~~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~-~iI~DE~y~~~~~~~s~ 175 (330)
T PRK05664 115 E-----------AEVEAAL-------DSLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGG-WLVVDEAFMDNTPQHSL 175 (330)
T ss_pred h-----------hhHhhhh-------cCCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCC-EEEEECCcccCCCcccc
Confidence 2 3455555 35678999999999999998654 5566788999 799999985332111
Q ss_pred -cccccCccEEEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHH
Q 012991 238 -DVKEIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVS 314 (452)
Q Consensus 238 -~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~ 314 (452)
.+...+-.+++.|+||. +|.+| +|++++++++++. + ..... ..+.+...+.+...+++...
T Consensus 176 ~~~~~~~~vi~~~SfSK~-~gl~GlRiG~~v~~~~l~~~-~-~~~~~-------------~~~~~~~~~~~~~~~L~~~~ 239 (330)
T PRK05664 176 AACAHRPGLIVLRSFGKF-FGLAGARLGFVLAEPALLRA-L-AELLG-------------PWTVSGPTRWLAQAALADTP 239 (330)
T ss_pred cccccCCCEEEEeecccc-ccCCCcceEEEEeCHHHHHH-H-HHhcC-------------CCCCCHHHHHHHHHHHhChH
Confidence 12111223788899996 77666 8999988777765 2 11100 01112222233333443221
Q ss_pred HhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccC
Q 012991 315 RFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQA 394 (452)
Q Consensus 315 ~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~ 394 (452)
..+..++.+++.++.+.+.|.+. ++. +......++|+..+ +..++.+.|.+ .||.++..
T Consensus 240 ----~~~~~~~~~~~~r~~l~~~L~~~-~~~---~~~~~~~f~~~~~~---------~~~~~~~~l~~-~gi~v~~f--- 298 (330)
T PRK05664 240 ----WQRRQRERLLAASQRLAALLRRH-GLT---PAGGCALFQWVRTE---------DAAALHEFLAR-RGILTRLF--- 298 (330)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHC-CCc---ccCCcceEEEEecC---------CHHHHHHHHHH-CCeEEEEC---
Confidence 24566777888889999999876 543 22222467777653 45788888866 59999632
Q ss_pred CCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhcc
Q 012991 395 PKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEEG 443 (452)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~~ 443 (452)
..++++||+++. +.+++++++++|+++.++.
T Consensus 299 ----------------~~~~~iRis~~~--~~~~~~~l~~al~~~~~~~ 329 (330)
T PRK05664 299 ----------------EQPASLRFGLPA--DEADWARLDQALLAYRKEA 329 (330)
T ss_pred ----------------CCCCeEEEECCC--CHHHHHHHHHHHHHHHhhc
Confidence 123699999985 6888999999999987764
No 207
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.92 E-value=2.9e-22 Score=200.08 Aligned_cols=351 Identities=13% Similarity=0.125 Sum_probs=227.7
Q ss_pred CCCCeEEeccC----CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHH
Q 012991 36 HQHGVARINNG----SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAA 111 (452)
Q Consensus 36 ~~~~~~~l~~~----~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~ 111 (452)
.+..++.+..+ ..+..++.+.+++.+.+......+.. ....+...++.+.++++++.+ .+.+++++||++|+
T Consensus 34 dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~sgsea~ 109 (413)
T cd00610 34 DGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLG---FFYNEPAVELAELLLALTPEG-LDKVFFVNSGTEAV 109 (413)
T ss_pred CCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccCc---ccCCHHHHHHHHHHHHhCCCC-CCEEEEcCcHHHHH
Confidence 45566666543 35567777999998887542111111 123567899999999999964 68999999999999
Q ss_pred HHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhc---------CcEEEEEeCCCCC--CChHHH-HHHHHH
Q 012991 112 AIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRA---------GGSVVEVQLPFPL--ASEEEI-INEFKK 179 (452)
Q Consensus 112 ~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~---------g~~v~~~~~~~~~--~~~~~~-~~~l~~ 179 (452)
..++..+. ...++++|++.++.|++.......+.... ..++..++.+.+. ..+... ++.|++
T Consensus 110 ~~al~~~~------~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 183 (413)
T cd00610 110 EAALKLAR------AYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEE 183 (413)
T ss_pred HHHHHHHH------HHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHH
Confidence 99998663 13568999999998888655544321110 1234445321000 012233 788988
Q ss_pred HHhccccCCCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccccC-Cc----cccccccCccEEEEc
Q 012991 180 GIEKGKKDGKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHAMG-SI----KIDVKEIGADFYVSN 250 (452)
Q Consensus 180 ~i~~~~~~~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~~g-~~----~~~~~~~~~d~~~~s 250 (452)
.+++. ..++++|+++..++++|...| +++|.++|++||+ ++|+|++++.. .. ..+.....+|++++
T Consensus 184 ~l~~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~-~li~Dev~~g~g~~g~~~~~~~~~~~~d~~t~- 258 (413)
T cd00610 184 ALEEH---PEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGI-LLIADEVQTGFGRTGKMFAFEHFGVEPDIVTL- 258 (413)
T ss_pred HHhcC---CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCC-EEEEeccccCCCcCcchhhHhhcCCCCCeEEE-
Confidence 88642 247889999998889999887 8999999999999 89999998732 11 12222334677654
Q ss_pred CcccCcCCCCcEEEEEecCccccCC-CCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHH
Q 012991 251 LHKWFFCPPSVAFLYCRKSILSSDM-HHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHE 329 (452)
Q Consensus 251 ~~K~l~g~~G~G~l~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~ 329 (452)
+|++.++..+|+++.++++++. + .... ....+.+.+...+.+..++++.+.+ +.+.+++++
T Consensus 259 -sK~l~~g~~~g~~~~~~~~~~~-~~~~~~-----------~~~~t~~~~~~~~~a~~a~l~~l~~-----~~~~~~~~~ 320 (413)
T cd00610 259 -GKGLGGGLPLGAVLGREEIMDA-FPAGPG-----------LHGGTFGGNPLACAAALAVLEVLEE-----EGLLENAAE 320 (413)
T ss_pred -cccccCccccEEEEEcHHHHHh-hccCCC-----------CCCCCCCcCHHHHHHHHHHHHHHHh-----ccHHHHHHH
Confidence 5998766668999888877764 2 0010 0001122233344455556666653 346778888
Q ss_pred HHHHHHHHHHHHcCC-CcCCCcccccceEEEEcCCcccc--CChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCC
Q 012991 330 QALKMARMLANAWGT-SLGSPPEICAAMVMVGLPSRLRV--MGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGAR 406 (452)
Q Consensus 330 ~~~~l~~~L~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~ 406 (452)
+.+++.+.|.++... .+.......+.++++.+++.... .+..+...+.+.|.++ ||.+....
T Consensus 321 ~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gv~v~~~~-------------- 385 (413)
T cd00610 321 LGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALER-GLLLRPSG-------------- 385 (413)
T ss_pred HHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHC-CeEEeecC--------------
Confidence 999999988876321 22211122367788877521000 0013567788888765 99985321
Q ss_pred CCCCCccceEEecccccCCHHHHHHHHHHHHHHH
Q 012991 407 DKDGIITGYARISHQVYNTLEDYEKFRDAVILLV 440 (452)
Q Consensus 407 ~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~ 440 (452)
++.+|++++..+|++||++++++|++++
T Consensus 386 ------~~~lR~~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 386 ------GNVIRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred ------CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 3689999999899999999999998753
No 208
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.91 E-value=3.8e-22 Score=197.98 Aligned_cols=329 Identities=12% Similarity=0.144 Sum_probs=215.6
Q ss_pred CCCCeEEeccC----CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHH
Q 012991 36 HQHGVARINNG----SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAA 111 (452)
Q Consensus 36 ~~~~~~~l~~~----~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~ 111 (452)
.++.++.+..+ ..++.++.+.+++.+.+.... .....+ ......++.+.++++++.++.+++++++||++|+
T Consensus 41 dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~-~~~~~~---~~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~ 116 (398)
T PRK03244 41 DGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLG-HVSNLF---ATEPQIALAERLVELLGAPEGGRVFFCNSGAEAN 116 (398)
T ss_pred CCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcc-CccCcc---CCHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHH
Confidence 34455555432 345656779999988876532 111112 1233468899999998864357999999999999
Q ss_pred HHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCc------------EEEEEeCCCCCCChHHHHHHHHH
Q 012991 112 AIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGG------------SVVEVQLPFPLASEEEIINEFKK 179 (452)
Q Consensus 112 ~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~------------~v~~~~~~~~~~~~~~~~~~l~~ 179 (452)
..++..+. ...+++|+..++.|++.......+ .|. ++..+ +..+ ++.+++
T Consensus 117 ~~al~~~~-------~~g~~~ii~~~~~yhg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~----~~~d----~~~l~~ 178 (398)
T PRK03244 117 EAAFKLAR-------LTGRTKIVAAEGGFHGRTMGALAL---TGQPAKRAPFEPLPGGVEHV----PYGD----VDALAA 178 (398)
T ss_pred HHHHHHHH-------HHCCCeEEEECCCcCCccHHHHhc---cCCcccccCCCCCCCCceEe----CCCC----HHHHHH
Confidence 99998653 122357777777887764443321 121 12222 1111 577888
Q ss_pred HHhccccCCCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEeccccc-CCc----cccccccCccEEEEc
Q 012991 180 GIEKGKKDGKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHAM-GSI----KIDVKEIGADFYVSN 250 (452)
Q Consensus 180 ~i~~~~~~~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~~-g~~----~~~~~~~~~d~~~~s 250 (452)
.+ .+++++|+++.++|++|.+.| +++|.++|++||+ ++|+|++++. |.. ........+|++++
T Consensus 179 ~~------~~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~-llI~DEv~~g~gr~g~~~~~~~~~~~pDi~t~- 250 (398)
T PRK03244 179 AV------DDDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGA-LLVLDEVQTGIGRTGAWFAHQHDGVTPDVVTL- 250 (398)
T ss_pred hh------cCCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCC-EEEEeccccCCcccchHHhhhhhCCCCCEEEE-
Confidence 77 468899999999999999987 8899999999999 8999999862 211 11233445787755
Q ss_pred CcccCcCCCCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHH
Q 012991 251 LHKWFFCPPSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQ 330 (452)
Q Consensus 251 ~~K~l~g~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~ 330 (452)
+|++.++..+|++++++++.+. + .... ....+ ..+...+.+..++++.+. .+.+.++++++
T Consensus 251 -sK~l~~G~~ig~~~~~~~~~~~-~-~~~~---------~~~t~--~~~~~~~aaa~a~l~~~~-----~~~~~~~~~~~ 311 (398)
T PRK03244 251 -AKGLGGGLPIGACLAFGPAADL-L-TPGL---------HGSTF--GGNPVACAAALAVLDTIA-----SEGLLENAERL 311 (398)
T ss_pred -chhhhCCcccEEEEEcHHHHhh-c-cCCC---------CcCCC--CCCHHHHHHHHHHHHHHH-----hccHHHHHHHH
Confidence 5987765558999998887664 2 1110 00011 112222333333344333 23567888889
Q ss_pred HHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCC
Q 012991 331 ALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDG 410 (452)
Q Consensus 331 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~ 410 (452)
.+++.+.|.++ +..+.......+.++++.++ ...+..+.+.|.++ ||.+...
T Consensus 312 ~~~l~~~L~~~-~~~~~~~v~g~g~~~~i~~~-------~~~~~~~~~~l~~~-Gv~~~~~------------------- 363 (398)
T PRK03244 312 GEQLRAGIEAL-GHPLVDHVRGRGLLLGIVLT-------APVAKAVEAAAREA-GFLVNAV------------------- 363 (398)
T ss_pred HHHHHHHHHhc-CCCceeeEeeccEEEEEEEe-------ccHHHHHHHHHHHC-CeEEeec-------------------
Confidence 99999999876 33322222234778888775 12456788888775 9998531
Q ss_pred CccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 411 IITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 411 ~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
..+.||++++..+|++||++++++|++++.+
T Consensus 364 -~~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~ 394 (398)
T PRK03244 364 -APDVIRLAPPLIITDAQVDAFVAALPAILDA 394 (398)
T ss_pred -CCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 1368999999988999999999999999864
No 209
>PRK08354 putative aminotransferase; Provisional
Probab=99.91 E-value=1.6e-21 Score=186.81 Aligned_cols=298 Identities=12% Similarity=0.071 Sum_probs=187.8
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHH
Q 012991 38 HGVARINNGSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQ 117 (452)
Q Consensus 38 ~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~ 117 (452)
.+++.|+.+.....|+.+.+++.+.+..... |+ ....++++++++++. +|++|+|+++++.+++..
T Consensus 8 ~~~i~l~~~~np~~p~~~~~a~~~~~~~~~~-----yp-----~~~~l~~~ia~~~~~----~I~vt~G~~~al~~~~~~ 73 (311)
T PRK08354 8 EGLIDFSASVNPYPPEWLDEMFERAKEISGR-----YT-----YYEWLEEEFSKLFGE----PIVITAGITEALYLIGIL 73 (311)
T ss_pred cceeEecCCCCCCCCHHHHHHHHHHHHHhhc-----CC-----ChHHHHHHHHHHHCC----CEEECCCHHHHHHHHHHh
Confidence 3577887775444467788888876543321 21 135688999999873 799999999999888753
Q ss_pred hhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEe
Q 012991 118 IGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIID 197 (452)
Q Consensus 118 l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~ 197 (452)
+ .+||+|++++|+|+.....+ +..|.++..+ +.+ ++.+++.+ . ++++++++
T Consensus 74 ~---------~~gd~vlv~~P~y~~~~~~~----~~~g~~~~~~----~~d-----~~~l~~~~------~-~~~~vi~~ 124 (311)
T PRK08354 74 A---------LRDRKVIIPRHTYGEYERVA----RFFAARIIKG----PND-----PEKLEELV------E-RNSVVFFC 124 (311)
T ss_pred h---------CCCCeEEEeCCCcHHHHHHH----HHcCCEEeec----CCC-----HHHHHHhh------c-CCCEEEEe
Confidence 3 58999999999999876654 4469888776 322 57777776 2 45789999
Q ss_pred ccCCCCcccccHH---HHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCC--cEEEEEecCccc
Q 012991 198 HITSMPCVVIPVR---KLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRKSILS 272 (452)
Q Consensus 198 ~~~n~tG~~~~l~---~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~ 272 (452)
+|+||||.+++.+ +|+++|+++|+ ++|+|+++......-......-.+++.|++|. ++.+| +|++++-.+.+.
T Consensus 125 ~P~NPTG~~~~~~~l~~l~~~a~~~~~-~li~De~y~~f~~~~~~~~~~~vi~~~S~SK~-~~l~GlRiG~~v~~~~~l~ 202 (311)
T PRK08354 125 NPNNPDGKFYNFKELKPLLDAVEDRNA-LLILDEAFIDFVKKPESPEGENIIKLRTFTKS-YGLPGIRVGYVKGFEEAFR 202 (311)
T ss_pred cCCCCCCCccCHHHHHHHHHHhhhcCc-EEEEeCcchhccccccccCCCcEEEEeccHhh-cCCccceeeeeeehHHHHH
Confidence 9999999999854 56777889999 79999998543211110112335788899996 77666 788877222111
Q ss_pred cCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCccc
Q 012991 273 SDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEI 352 (452)
Q Consensus 273 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 352 (452)
. ...+ .+.+. .+.. +...+.+ .+.+.+ ++..+.+.+....+.+... .++.
T Consensus 203 ~-~~~~-----------------~~~~~---~~~~-~~~~~~~--~~~~~~----~~~~~~~~~~~~~l~~~l~-~~~~- 252 (311)
T PRK08354 203 S-VRMP-----------------WSIGS---TGYA-FLEFLIE--DDFEHL----RKTMPLIWREKERFEKALY-VKSD- 252 (311)
T ss_pred H-cCCC-----------------ccCCH---HHHH-HHHHHHH--hHHHHH----HHHHHHHHHHHHHHHHhcC-CCCC-
Confidence 1 0000 01111 1111 2222221 022222 2223333333332212111 2222
Q ss_pred ccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHH
Q 012991 353 CAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKF 432 (452)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l 432 (452)
++++++.++ +..++.+.|.+ .||.+.++..+ ..++++||+++ +.++.+++
T Consensus 253 -~~~~~~~~~---------~~~~~~~~l~~-~gv~v~~g~~f----------------~~~~~iRi~~~---~~~~~~~l 302 (311)
T PRK08354 253 -ANFFIKDVG---------DAEKFVEFLKR-NGILVRDCTSF----------------GLPGYIRFSVR---DREENEKL 302 (311)
T ss_pred -CcEEEEECC---------CHHHHHHHHHH-CCeEEEecccC----------------CCCCeEEEEeC---CHHHHHHH
Confidence 556665543 45678888866 59999877654 12479999998 67889999
Q ss_pred HHHHHHHH
Q 012991 433 RDAVILLV 440 (452)
Q Consensus 433 ~~~l~~~~ 440 (452)
+++|+++.
T Consensus 303 ~~al~~~~ 310 (311)
T PRK08354 303 IRALREWR 310 (311)
T ss_pred HHHHHHhh
Confidence 99998764
No 210
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=6.7e-23 Score=200.81 Aligned_cols=309 Identities=16% Similarity=0.204 Sum_probs=201.6
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|.+...+..+++++.+++++|.+ ++++++||++|+..++.++ +++||+|+++.+.|.+....+..+ ..
T Consensus 47 y~r~~np~~~~lE~~lA~l~g~~---~~l~~~sG~~Ai~~~l~~l--------l~~GD~Vlv~~~~y~~~~~~~~~~-~~ 114 (385)
T PRK08574 47 YSREENPTLRPLEEALAKLEGGV---DALAFNSGMAAISTLFFSL--------LKAGDRVVLPMEAYGTTLRLLKSL-EK 114 (385)
T ss_pred EECCCCccHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHH--------hCCCCEEEEcCCCchhHHHHHHHh-hc
Confidence 44555667889999999999984 6677889999999998876 589999999999999987777664 66
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCC-ceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEeccccc
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGK-MIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAM 232 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~-~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~ 232 (452)
.|++++.+. .+ .+++++.+ .+ ++++|++++++||+|.+.|+++|+++|+++|+ ++++|++++.
T Consensus 115 ~g~~v~~~~----~d-----~~~l~~~i------~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi-~livD~t~a~ 178 (385)
T PRK08574 115 FGVKVVLAY----PS-----TEDIIEAI------KEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGA-ILVVDNTFAT 178 (385)
T ss_pred cCcEEEEEC----CC-----HHHHHHhc------CccCceEEEEECCCCCCCEecCHHHHHHHHHHcCC-EEEEECCCCc
Confidence 788888772 22 57788888 44 89999999999999999999999999999999 7999999987
Q ss_pred CCccccccccCccEEEEcCcccCcCCCC--cEEEEEe-cCccccCCCCCceeccCCCCcccccccccccCccccccHHHH
Q 012991 233 GSIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCR-KSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSA 309 (452)
Q Consensus 233 g~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 309 (452)
|...... ..++|++++|++|+++|+.. .|.++++ +++.+. + ..+ ...+|. ..+ ++ ....+
T Consensus 179 ~~~~~~l-~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~-~-~~~-~~~~g~----------~~~--p~-~a~l~ 241 (385)
T PRK08574 179 PLLYRPL-RHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEE-L-WEW-RRRLGT----------IMQ--PF-EAYLV 241 (385)
T ss_pred cccCChh-hhCCcEEEeeCceeecCCCCceeEEEEECcHHHHHH-H-HHH-HHhcCC----------CCC--HH-HHHHH
Confidence 7542222 45789999999999766543 2645554 444332 1 111 000111 111 11 11122
Q ss_pred HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc----------------ccccceEEEEcCCccccCChhh
Q 012991 310 VTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP----------------EICAAMVMVGLPSRLRVMGEDD 372 (452)
Q Consensus 310 l~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ 372 (452)
+.-++ -+....++..+++..+.+.|++.+.++ |..|. ...++++.|.++. +...
T Consensus 242 l~~l~----tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~-----~~~~ 312 (385)
T PRK08574 242 LRGLK----TLEVRFERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKG-----GRDA 312 (385)
T ss_pred HcccC----cHHHHHHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCC-----CHHH
Confidence 22222 234445666778889999998877663 43331 1247788998851 1234
Q ss_pred HHHHHHHHhhhcceEeeecccC-----CCCCCCCCCC--CCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 373 ALRLRGHLRVRFGVEVPIHYQA-----PKDDGQPQAG--ARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 373 ~~~l~~~L~~~~gI~v~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
..++.+.|. -+.+.+..+... +....+.... ..++.+..++.+|+|++. ||++.+++.|.+.++
T Consensus 313 ~~~~~~~l~-l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dli~dl~~al~ 383 (385)
T PRK08574 313 VLKFLRSLK-LIKPSPSLGGVESLATYPVKSAASPIPEEDRKALGITEDLVRLSVGL----EDVEDLIEDLDQALG 383 (385)
T ss_pred HHHHHHcCC-cceEccCCCCCcceeeCCCcCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHh
Confidence 566777763 234443322111 0000000000 011224557899999984 556667777666653
No 211
>PLN02242 methionine gamma-lyase
Probab=99.91 E-value=1.7e-22 Score=199.55 Aligned_cols=312 Identities=16% Similarity=0.213 Sum_probs=203.1
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHH-HH
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAY-VT 152 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~-a~ 152 (452)
|++...+..+++++.+++++|.+ .+++++||++|+..++.++ +++||+|+++.+.|.+....+... ++
T Consensus 70 Y~r~~~Pt~~~LE~~lA~l~g~~---~~l~~~sG~~Ai~~al~al--------~~~GD~Vl~~~~~Y~~~~~~~~~~~~~ 138 (418)
T PLN02242 70 YSRHFNPTVLNLGRQMAALEGTE---AAYCTASGMSAISSVLLQL--------CSSGGHVVASNTLYGGTHALLAHFLPR 138 (418)
T ss_pred ccCCCChhHHHHHHHHHHHhCCC---eEEEEccHHHHHHHHHHHH--------hCCCCEEEEcCCcHHHHHHHHHHhhhh
Confidence 55556778999999999999984 6678999999999999887 589999999999998776555322 23
Q ss_pred hcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCC-ceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccc
Q 012991 153 RAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGK-MIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHA 231 (452)
Q Consensus 153 ~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~-~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~ 231 (452)
..|++++.++. .+ ++++++++ .+ ++++|++++++||+|.+.|+++|+++|+++|+ ++|+|++++
T Consensus 139 ~~G~~~~~~d~----~d----~e~l~~~i------~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi-~livDea~~ 203 (418)
T PLN02242 139 KCNITTTFVDI----TD----LEAVKKAV------VPGKTKVLYFESISNPTLTVADIPELARIAHEKGV-TVVVDNTFA 203 (418)
T ss_pred ccCceEEEcCC----CC----HHHHHHhc------CcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCC-EEEEECCCC
Confidence 46888887732 22 68888888 45 59999999999999999999999999999999 799999986
Q ss_pred cCCccccccccCccEEEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHH
Q 012991 232 MGSIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSA 309 (452)
Q Consensus 232 ~g~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 309 (452)
... .+...+++|+++.|++|+++|+.. .|+++.+++++.. + ..... + .....|.. ...+.+ +
T Consensus 204 ~~~--~~~~~~g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~-l-~~~~~---~-----~~~~~g~~-~~~~~A---~ 267 (418)
T PLN02242 204 PMV--LSPARLGADVVVHSISKFISGGADIIAGAVCGPAELVNS-M-MDLHH---G-----ALMLLGPT-MNPKVA---F 267 (418)
T ss_pred ccC--CCHHHcCCcEEEEeCccccCCCCCceEEEEEcCHHHHHH-H-HHHhh---h-----hhhccCCC-CCHHHH---H
Confidence 443 233445789999999998544432 4888877776654 1 11100 0 00011211 111111 1
Q ss_pred HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCc-----------------ccccceEEEEcCCccccCChhh
Q 012991 310 VTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPP-----------------EICAAMVMVGLPSRLRVMGEDD 372 (452)
Q Consensus 310 l~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~ 372 (452)
+.. ... ..+...+++..++++++.+.|.+. ++++..|. ...++++.|.+. +...
T Consensus 268 l~~-~~l-~tl~~r~~~~~~~a~~la~~L~~~-~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~------~~~~ 338 (418)
T PLN02242 268 ELS-ERL-PHLSLRMKEHCRRAMEYAKRMKEL-GLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMD------TEER 338 (418)
T ss_pred HHH-cCC-CcHHHHHHHHHHHHHHHHHHHHhC-CCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEEC------CHHH
Confidence 111 111 134555677889999999999987 56665442 134788889884 2334
Q ss_pred HHHHHHHHhhhc----ceEeeecccC-C----CCCCCCCCC--CCCCCCCccceEEecccccCCHH-HHHHHHHHHHHHH
Q 012991 373 ALRLRGHLRVRF----GVEVPIHYQA-P----KDDGQPQAG--ARDKDGIITGYARISHQVYNTLE-DYEKFRDAVILLV 440 (452)
Q Consensus 373 ~~~l~~~L~~~~----gI~v~~~~~~-~----~~~~~~~~~--~~~~~~~~~~~iRis~~~~~t~~-di~~l~~~l~~~~ 440 (452)
+.++++.|. -. .+.+..+... . ....+.... .....+..++.+|+|++. | |++.+++.|++.+
T Consensus 339 ~~~f~~~l~-~~~~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl----E~~~~dli~dl~~al 413 (418)
T PLN02242 339 ANRLMRYLQ-NSTQFGFMAVSLGYYETLMSCSGSSTSSELDPEEKAAAGISPGLVRMSVGY----TGTLEQRWSQFEKAL 413 (418)
T ss_pred HHHHHHHhh-cccccceeeecCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecC----CCCHHHHHHHHHHHH
Confidence 667777773 12 2333222111 0 000000000 011124567899999985 4 3555666666555
Q ss_pred h
Q 012991 441 E 441 (452)
Q Consensus 441 ~ 441 (452)
+
T Consensus 414 ~ 414 (418)
T PLN02242 414 S 414 (418)
T ss_pred H
Confidence 3
No 212
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.91 E-value=2.6e-22 Score=197.99 Aligned_cols=313 Identities=15% Similarity=0.202 Sum_probs=207.2
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|.+...+...++++++++++|.+ .+++++||++|+..++.++ +++||+|+++.+.|.+....+...+..
T Consensus 58 Y~r~~~p~~~~Le~~iA~~~g~~---~~l~~~sG~~Ai~~al~~l--------l~~Gd~Vl~~~~~y~~~~~~~~~~~~~ 126 (400)
T PRK06234 58 YSRLGNPTSTEVENKLALLEGGE---AAVVAASGMGAISSSLWSA--------LKAGDHVVASDTLYGCTFALLNHGLTR 126 (400)
T ss_pred ccCCCCccHHHHHHHHHHHhCCC---cEEEEcCHHHHHHHHHHHH--------hCCCCEEEEecCccchHHHHHHHHHhh
Confidence 44445667899999999999974 5788999999999888766 589999999999999877777665677
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHc--CCCEEEEecccc
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDE--GVDQVFVDAAHA 231 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~--~~~~~ivD~a~~ 231 (452)
.|++++.++. .+ ++++++.+ ++++++|++++|+||+|.+.|+++|.++|+++ |+ ++++|++++
T Consensus 127 ~G~~v~~vd~----~d----~e~l~~~i------~~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i-~livDea~~ 191 (400)
T PRK06234 127 YGVEVTFVDT----SN----LEEVRNAL------KANTKVVYLETPANPTLKVTDIKAISNIAHENNKEC-LVFVDNTFC 191 (400)
T ss_pred CCeEEEEECC----CC----HHHHHHHh------ccCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCC-EEEEECCCC
Confidence 8999999943 32 68888888 57899999999999999999999999999997 89 799999998
Q ss_pred cCCccccccccCccEEEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHH
Q 012991 232 MGSIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSA 309 (452)
Q Consensus 232 ~g~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 309 (452)
.+...... ..++|+++.|++|++.|+.. .|++++++++++. +....... ..|. ...+. ....+
T Consensus 192 ~~~~~~~l-~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~-l~~~~~~~-----------~~g~-~l~p~-~a~l~ 256 (400)
T PRK06234 192 TPYIQRPL-QLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQ-VKLFGIKD-----------MTGS-VIGPF-EAFLI 256 (400)
T ss_pred chhcCCch-hhCCcEEEeeccccccCCCCceeEEEEecHHHHHH-HHHHHHHH-----------hcCC-CCCHH-HHHHH
Confidence 77543222 34789999999998654331 4888888876554 21000000 0011 00111 11112
Q ss_pred HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc--------------ccccceEEEEcCCccccCChhhHH
Q 012991 310 VTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP--------------EICAAMVMVGLPSRLRVMGEDDAL 374 (452)
Q Consensus 310 l~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~ 374 (452)
+.-++ .++...++..+++..+.+.|++.+.+. +..|. ...++++.|.++. ......
T Consensus 257 ~~~l~----tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~-----~~~~~~ 327 (400)
T PRK06234 257 IRGMK----TLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKG-----GVEEGK 327 (400)
T ss_pred HhccC----cHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecC-----cHHHHH
Confidence 22222 244556667788899999998876552 33331 1247788998852 123456
Q ss_pred HHHHHHhhhcceEeeecccC-----CCCCCCCCCCC--CCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 375 RLRGHLRVRFGVEVPIHYQA-----PKDDGQPQAGA--RDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 375 ~l~~~L~~~~gI~v~~~~~~-----~~~~~~~~~~~--~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
++.+.|.- +++.+..+... +....++.... ++..+..++.+|+|++. ||.+.+++.|++.++
T Consensus 328 ~f~~~l~~-~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl----E~~~dl~~dl~~al~ 396 (400)
T PRK06234 328 VVMNNVKL-ATLAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGL----EDVDDIIADLKQALD 396 (400)
T ss_pred HHHHhCCc-ceEeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHHH
Confidence 78888843 56665433211 00000111111 11225567899999985 445555555555443
No 213
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.91 E-value=1.7e-22 Score=197.10 Aligned_cols=298 Identities=18% Similarity=0.182 Sum_probs=192.5
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|.+...+...+++++++++. . ++.+++++|++|+..++.++ +++||+|+++++.|.+....+.....+
T Consensus 45 y~ry~~p~~~~Le~~lA~l~-~---~~~v~~~sG~~Ai~~~l~al--------l~~Gd~Vl~~~~~y~~~~~~~~~~l~~ 112 (366)
T PRK07582 45 YGRASNPTWRALEAALGELE-G---AEALVFPSGMAAITAVLRAL--------LRPGDTVVVPADGYYQVRALAREYLAP 112 (366)
T ss_pred eECCCCccHHHHHHHHHHHc-C---CCEEEECCHHHHHHHHHHHh--------cCCCCEEEEeCCCcHhHHHHHHHHHhc
Confidence 33344566899999999998 3 35667777788999998876 589999999999998765555443466
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccc--
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHA-- 231 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~-- 231 (452)
.|++++.++. ++.. + .+ .+++++|++++++||+|.+.|+++|+++|+++|+ ++++|++++
T Consensus 113 ~G~~v~~v~~----~~~~---~----~~------~~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~-~lvVD~t~~~~ 174 (366)
T PRK07582 113 LGVTVREAPT----AGMA---E----AA------LAGADLVLAETPSNPGLDVCDLAALAAAAHAAGA-LLVVDNTTATP 174 (366)
T ss_pred CeEEEEEECC----CChH---H----Hh------ccCceEEEEECCCCCCCCccCHHHHHHHHHHcCC-EEEEECCCCCc
Confidence 7999999943 3221 1 22 3578999999999999999999999999999999 899999875
Q ss_pred cCCccccccccCccEEEEcCcccCcCCCC--cEEEEEe-cCccccCCCCCceeccCCCCcccccccccccCccccccHHH
Q 012991 232 MGSIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCR-KSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPS 308 (452)
Q Consensus 232 ~g~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (452)
.+..+++ +++|+++.|++||+.|+.| .|+++.+ +++... + ..... ..| ..++.. ....
T Consensus 175 ~~~~p~~---~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~-l-~~~~~-~~g----------~~~~~~---~a~l 235 (366)
T PRK07582 175 LGQRPLE---LGADLVVASDTKALTGHSDLLLGYVAGRDPELMAA-V-ERWRL-LAG----------AIPGPF---EAWL 235 (366)
T ss_pred cccCchh---cCCcEEEecccccccCCCCeeEEEEEcCcHHHHHH-H-HHHHH-HhC----------CCCCHH---HHHH
Confidence 3444444 4789999999999888877 5887775 444332 1 11100 000 111111 1122
Q ss_pred HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc---c-----------cccceEEEEcCCccccCChhhH
Q 012991 309 AVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP---E-----------ICAAMVMVGLPSRLRVMGEDDA 373 (452)
Q Consensus 309 al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~---~-----------~~~~~~~~~~~~~~~~~~~~~~ 373 (452)
++.-+. .++...++..+++..+.+.|.+.+.+. |..|. + ..++++.|.++ +.
T Consensus 236 ~~r~l~----tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~---------~~ 302 (366)
T PRK07582 236 AHRSLG----TLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA---------DA 302 (366)
T ss_pred HHhccc----cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC---------CH
Confidence 222222 234445777889999999999988764 33221 1 25889999884 23
Q ss_pred HHHHHHHhhhcceEeeecccCCCCCCCCCCCCCC-C--CCCccceEEecccccCCHHHHHHHHHHHHH
Q 012991 374 LRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARD-K--DGIITGYARISHQVYNTLEDYEKFRDAVIL 438 (452)
Q Consensus 374 ~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~-~--~~~~~~~iRis~~~~~t~~di~~l~~~l~~ 438 (452)
.++.+.+.. .++....... |+........ . ....++.||+|++..+.++.|+.+.++|++
T Consensus 303 ~~~~~~~~~-l~~~~~~~s~----G~~~sl~~~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al~~ 365 (366)
T PRK07582 303 AAAERFVAA-SRLVVAATSF----GGVHTSADRRARWGDAVPEGFVRLSCGIEDTDDLVADLERALDA 365 (366)
T ss_pred HHHHHHHHh-CCcceecccC----CCccchhhhHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 344455533 3554321000 0000000000 0 013467999999987766667777777654
No 214
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.91 E-value=2.2e-22 Score=199.30 Aligned_cols=325 Identities=16% Similarity=0.183 Sum_probs=207.5
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|++...+..+.+++.++++.|.+ ..++++||++|+..++.++ +++||+|+++.+.|++....+...+.+
T Consensus 58 y~r~~~p~~~~Le~~lA~leg~~---~al~~~sG~~Ai~~al~~l--------l~~GD~Vlv~~~~y~~t~~~~~~~~~~ 126 (431)
T PRK08248 58 YTRIMNPTTDVFEKRIAALEGGI---GALAVSSGQAAITYSILNI--------ASAGDEIVSSSSLYGGTYNLFAHTLPK 126 (431)
T ss_pred eECCCCchHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHH--------hCCCCEEEEccCchhhHHHHHHHHHHh
Confidence 44555666888999999999974 7788999999999999876 589999999999998887777776788
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|++++.++. .+ ++++++++ ++++++|++++++||+|.+.|+++|+++|+++|+ ++|+|++++.+
T Consensus 127 ~Gv~v~~vd~----~d----~e~l~~ai------~~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi-~vIvD~t~a~~ 191 (431)
T PRK08248 127 LGITVKFVDP----SD----PENFEAAI------TDKTKALFAETIGNPKGDVLDIEAVAAIAHEHGI-PLIVDNTFASP 191 (431)
T ss_pred CCEEEEEECC----CC----HHHHHHhc------CCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCC-EEEEeCCCCcc
Confidence 8999999943 22 68888888 5689999999999999999999999999999999 89999998865
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEEe-cCcccc---C---CCCCceec-------cCCCCc----cc--c
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCR-KSILSS---D---MHHPVVSH-------EFGNGL----PI--E 291 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~-~~~~~~---~---l~~~~~~~-------~~~~~~----~~--~ 291 (452)
....++ .+++|+++.|++||++| +| +|.+++. .+.... . +..+.-.+ ..+... .. .
T Consensus 192 ~~~~pl-~~gaDivv~S~tK~lgg-~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (431)
T PRK08248 192 YLLRPI-EHGADIVVHSATKFIGG-HGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQL 269 (431)
T ss_pred ccCChh-HcCCCEEEEcCccccCC-CCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHH
Confidence 543333 56899999999998544 44 5665553 322110 0 00000000 000000 00 0
Q ss_pred cccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc---------------ccccc
Q 012991 292 SAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP---------------EICAA 355 (452)
Q Consensus 292 ~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~---------------~~~~~ 355 (452)
....| ...+...|.-.++.+ +.+....++..+++..+.+.|++.+.++ +..|. ...++
T Consensus 270 ~~~~G-----~~l~p~~a~l~~rgl-~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg 343 (431)
T PRK08248 270 LRDLG-----AALSPFNSFLLLQGL-ETLHLRMERHSENALAVAKFLEEHEAVEWVSYPGLPSHPSYELAKKYLPKGQGA 343 (431)
T ss_pred HHhcC-----CCCCHHHHHHHhcCc-CcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCce
Confidence 00011 111111222222210 1233556777889999999999998764 43331 12377
Q ss_pred eEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccC-----CCCCCCCCCC--CCCCCCCccceEEecccccCCHHH
Q 012991 356 MVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQA-----PKDDGQPQAG--ARDKDGIITGYARISHQVYNTLED 428 (452)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~iRis~~~~~t~~d 428 (452)
++.|.+.. ....+.++.+.|. -+.+.+..+... +....+.... .++..+..++.||+|++. ||
T Consensus 344 ~~sf~l~~-----~~~~~~~f~~~l~-l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed 413 (431)
T PRK08248 344 ILTFGIKG-----GVEAGKKLIDSVK-LFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTPGLVRLSVGT----EA 413 (431)
T ss_pred EEEEEecC-----CHHHHHHHHHhCC-cceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCCCeEEEEecc----CC
Confidence 99998851 1234566777773 234443322110 0000000000 011235568899999984 56
Q ss_pred HHHHHHHHHHHHhc
Q 012991 429 YEKFRDAVILLVEE 442 (452)
Q Consensus 429 i~~l~~~l~~~~~~ 442 (452)
++.+++.|.+.++.
T Consensus 414 ~~dL~~Dl~~Al~~ 427 (431)
T PRK08248 414 IDDILDDLRQAIRQ 427 (431)
T ss_pred HHHHHHHHHHHHHh
Confidence 66677777776654
No 215
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.91 E-value=9.2e-22 Score=205.63 Aligned_cols=328 Identities=19% Similarity=0.196 Sum_probs=218.2
Q ss_pred hhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCC-CCCCEEEEeCCcchhHHHHHHHHHHhc
Q 012991 76 NSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRF-HRNDTVLMLHCAFQAVKKSIQAYVTRA 154 (452)
Q Consensus 76 ~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~-~~g~~Vl~~~~~~~s~~~~~~~~a~~~ 154 (452)
.+..+.+.++++++++++|.+ ..-++.++|+.|....+.++ |.|.+..- ..+++|+++...|.++...+ ...
T Consensus 526 qG~lq~i~elq~~l~eltGmd--~~Sl~p~aGA~gE~agL~ai-R~y~~~rge~~R~~vlip~saHgtnPasa----~~~ 598 (939)
T TIGR00461 526 EGYQELIAQLEKWLCSITGFD--AISLQPNSGAQGEYAGLRVI-RSYHESRGENHRNICLIPVSAHGTNPASA----AMA 598 (939)
T ss_pred HHHHHHHHHHHHHHHHHHCCC--CcccCCchHHHHHHHHHHHH-HHHHHhcCCCCCCEEEEEccccCcCHHHH----HHC
Confidence 446688999999999999996 34456677777766566655 22211101 23468999999998886664 456
Q ss_pred CcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCccccc-HHHHHHHHHHcCCCEEEEeccccc
Q 012991 155 GGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIP-VRKLVKICRDEGVDQVFVDAAHAM 232 (452)
Q Consensus 155 g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~-l~~i~~l~~~~~~~~~ivD~a~~~ 232 (452)
|.+++.+ +.++++.+ +++|++.++++ +.++++|++++++| +|.+.| +++|+++||++|. ++++|+++..
T Consensus 599 G~~Vv~V----~~d~~G~iDle~L~~~i~~~---~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~-~v~VDgAq~~ 669 (939)
T TIGR00461 599 GMQVVPV----NCDQDGNIDLVDLKNKAEQH---GDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGG-QVYLDGANMN 669 (939)
T ss_pred CCEEEEe----ccCCCCCcCHHHHHHHHhhc---CCceEEEEEEeCCc-CceecccHHHHHHHHHHcCC-EEEEEecChh
Confidence 9999999 44566777 99999999642 36899999999999 799977 9999999999999 7999999977
Q ss_pred CCccc-cccccCccEEEEcCcccCc-----CCCCcEEEEEecCccccCCCCCceeccC-CCCcc--cc-cccccccCccc
Q 012991 233 GSIKI-DVKEIGADFYVSNLHKWFF-----CPPSVAFLYCRKSILSSDMHHPVVSHEF-GNGLP--IE-SAWIGTRDYSA 302 (452)
Q Consensus 233 g~~~~-~~~~~~~d~~~~s~~K~l~-----g~~G~G~l~~~~~~~~~~l~~~~~~~~~-~~~~~--~~-~~~~~~~~~~~ 302 (452)
+...+ +...+++|++.+|.||+|+ |++|+|++++++.+... +-.+...... +.+.. +. .....+.+...
T Consensus 670 al~~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~-lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~ 748 (939)
T TIGR00461 670 AQVGLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPF-LPKHDVVSMITGIGGSKSIGSVSAAPYGSASI 748 (939)
T ss_pred hCCCCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhh-cCCCcccccccCCCCccccccccccccCcHHH
Confidence 44433 4567899999999999998 56667999999876654 2111111100 00000 00 00001111111
Q ss_pred cccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcc--cccceEEEEcCCccccCChhhHHHHHHHH
Q 012991 303 QLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPE--ICAAMVMVGLPSRLRVMGEDDALRLRGHL 380 (452)
Q Consensus 303 ~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 380 (452)
....+..+..+.. +|+.++.+....+++|+.+.|.+ ++++..+.. .+.+-+++.++.. ....+.+..++.+.|
T Consensus 749 ~l~a~~yi~~lG~--~GL~~~a~~ailnAnYl~~rL~~--~~~~l~~~~~~~~~hEfv~~~~~~-~~~~g~~~~dIakrL 823 (939)
T TIGR00461 749 LPISWMYIKMMGN--EGLPKASVVAILNANYMATRLKD--HYPILFVGTLKHVAHECILDLRPL-KAKTGIEAIDVAKRL 823 (939)
T ss_pred HHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHhhc--cCcccccCCCCceeEEEEEeccch-hhhcCCCHHHHHHHH
Confidence 1223333444443 36777788888999999999987 455544321 1233455555411 111245778999999
Q ss_pred hhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhcc
Q 012991 381 RVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEEG 443 (452)
Q Consensus 381 ~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~~ 443 (452)
.+ +|+..+..+.+ ..+.+-+.+...++.+|||+++++|.++.++.
T Consensus 824 ~d-~G~hapt~~~p-----------------v~g~lmiepTE~eskeelD~f~~al~~I~~e~ 868 (939)
T TIGR00461 824 QD-YGFHAPTLSFP-----------------VPGTLMVEPTESESLEELDRFCDAMIAIKEEI 868 (939)
T ss_pred Hh-CCeeccccCCc-----------------cCCeEEEEeeccCCHHHHHHHHHHHHHHHHHH
Confidence 76 69998764322 12366666666679999999999998887643
No 216
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.91 E-value=8.2e-22 Score=194.26 Aligned_cols=323 Identities=17% Similarity=0.187 Sum_probs=206.6
Q ss_pred HHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEE
Q 012991 80 KGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVV 159 (452)
Q Consensus 80 ~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~ 159 (452)
....++++.+++++|.+ ..++++|||+|+.+++.++ .+++||+|+++.++|.+...++ ...|++++
T Consensus 29 ~~~~~le~~la~~~g~~---~~v~~~sgt~al~~~l~al-------~~~~Gd~Viv~~~~~~~~~~~~----~~~G~~~~ 94 (380)
T TIGR03588 29 PTVPAFEEALAEYVGAK---YAVAFNSATSALHIACLAL-------GVGPGDRVWTTPITFVATANCA----LYCGAKVD 94 (380)
T ss_pred hhHHHHHHHHHHHHCCC---eEEEEcCHHHHHHHHHHHc-------CCCCCCEEEeCCcchHHHHHHH----HHcCCEEE
Confidence 34688999999999995 4566778999999999976 2589999999999998876554 45699999
Q ss_pred EEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCcccc
Q 012991 160 EVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKID 238 (452)
Q Consensus 160 ~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~ 238 (452)
.+++.. +...+ ++++++.+++.+ .+++++|+++| ++|...|+++|.++|+++|+ ++|+|++|+.|.. ++
T Consensus 95 ~~~~~~---~~~~~d~~~l~~~i~~~~--~~~t~~v~~~~---~~G~~~~~~~i~~l~~~~~~-~lI~D~a~a~g~~-~~ 164 (380)
T TIGR03588 95 FVDIDP---DTGNIDEDALEKKLAAAK--GKLPKAIVPVD---FAGKSVDMQAIAALAKKHGL-KIIEDASHALGAE-YG 164 (380)
T ss_pred EEecCC---CcCCcCHHHHHHHhhccc--CCCceEEEEeC---CCCccCCHHHHHHHHHHcCC-EEEEECCCcccCc-cC
Confidence 996521 12334 899999994210 15788888765 47999999999999999999 7999999999875 44
Q ss_pred ccccCc----cEEEEcCc--ccCcCCCCcEEEEEec-CccccCCCCCceeccCCCCc---------cc--ccccccccCc
Q 012991 239 VKEIGA----DFYVSNLH--KWFFCPPSVAFLYCRK-SILSSDMHHPVVSHEFGNGL---------PI--ESAWIGTRDY 300 (452)
Q Consensus 239 ~~~~~~----d~~~~s~~--K~l~g~~G~G~l~~~~-~~~~~~l~~~~~~~~~~~~~---------~~--~~~~~~~~~~ 300 (452)
...++. |+.++|+| |++..+.| |+++.++ ++.+. + .....+...... +. .....|...
T Consensus 165 ~~~~g~~~~~d~~~~S~~~~K~~~~~~G-G~v~~~~~~~~~~-~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~- 240 (380)
T TIGR03588 165 GKPVGNCRYADATVFSFHPVKIITTAEG-GAVTTNDEELAER-M-RLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNY- 240 (380)
T ss_pred CEeCCCccccceEEEecCCCCcccccCc-eEEEECCHHHHHH-H-HHHHHCCCCCCcccccccccCcceeeeecccccc-
Confidence 444455 99999987 98766665 6666654 33332 1 111000000000 00 000011111
Q ss_pred cccccHHHHH--HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCc-c--cccceEEEEcCCccccCChhhHHH
Q 012991 301 SAQLVIPSAV--TFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPP-E--ICAAMVMVGLPSRLRVMGEDDALR 375 (452)
Q Consensus 301 ~~~~~~~~al--~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~ 375 (452)
.+.-+.+++ ..+. .++.+.++.+++.+++.+.|..++++.+..++ . ....+..+.++.. .+.+.++
T Consensus 241 -~m~~l~aa~g~~qL~----~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~r~~ 311 (380)
T TIGR03588 241 -RMTDIQAALGLSQLK----KLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQE----FGCTRKE 311 (380)
T ss_pred -CccHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCc----CCCCHHH
Confidence 111122222 2233 36777888899999999999888766644332 1 1122333333210 1346788
Q ss_pred HHHHHhhhcceEeeecccCCCCCCCCCCCCCC-CC----CCccceEEecccccCCHHHHHHHHHHHHHHH
Q 012991 376 LRGHLRVRFGVEVPIHYQAPKDDGQPQAGARD-KD----GIITGYARISHQVYNTLEDYEKFRDAVILLV 440 (452)
Q Consensus 376 l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~-~~----~~~~~~iRis~~~~~t~~di~~l~~~l~~~~ 440 (452)
+.+.|.+ .||.++..+.+.+........... .. ......+++.++...|.+||++++++|++++
T Consensus 312 l~~~L~~-~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 312 VFEALRA-AGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred HHHHHHH-CCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHhC
Confidence 9999976 499987655442210000000000 00 1123679999999999999999999999864
No 217
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.91 E-value=8.6e-24 Score=200.66 Aligned_cols=229 Identities=17% Similarity=0.193 Sum_probs=174.4
Q ss_pred hhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcC
Q 012991 76 NSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAG 155 (452)
Q Consensus 76 ~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g 155 (452)
..+...++++++.+++++|++ ..+++|+|+|+++..++.++ +++||+|++++++|.++..++.. .|
T Consensus 55 ~~~~g~i~~~~~~~A~~~ga~--~~~~~~~Gst~a~~~~l~al--------~~~gd~Vlv~~~~h~s~~~~~~~----~g 120 (294)
T cd00615 55 LDPTGPIKEAQELAARAFGAK--HTFFLVNGTSSSNKAVILAV--------CGPGDKILIDRNCHKSVINGLVL----SG 120 (294)
T ss_pred CCCChHHHHHHHHHHHHhCCC--CEEEEcCcHHHHHHHHHHHc--------CCCCCEEEEeCCchHHHHHHHHH----CC
Confidence 445667899999999999985 55666999999999998876 58999999999999998877654 58
Q ss_pred cEEEEEeCCCCCCCh----HHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEeccc
Q 012991 156 GSVVEVQLPFPLASE----EEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAH 230 (452)
Q Consensus 156 ~~v~~~~~~~~~~~~----~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~ 230 (452)
++++++++.. +++ +.+ ++++++++++ .+++++|+++++ |++|.++|+++|+++|+++|+ ++++|++|
T Consensus 121 ~~~~~v~~~~--~~~~~~~~~i~~~~l~~~l~~----~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~-~livDeA~ 192 (294)
T cd00615 121 AVPVYLKPER--NPYYGIAGGIPPETFKKALIE----HPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGL-PVLVDEAH 192 (294)
T ss_pred CEEEEecCcc--CcccCcCCCCCHHHHHHHHHh----CCCceEEEEECC-CCCCEecCHHHHHHHHHhcCC-eEEEECcc
Confidence 9999886521 221 234 8999999864 357899999987 689999999999999999999 79999998
Q ss_pred cc-----CCccccccccCccEEEEcCcccCcCCCCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCcccccc
Q 012991 231 AM-----GSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLV 305 (452)
Q Consensus 231 ~~-----g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (452)
+. +..+.+....++|+++.|+||++.|+++.|+++.+.+.... ..+.. ......+++|++..+.+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~---~~~~~-------~~~~~~ttsps~~~~as 262 (294)
T cd00615 193 GAHFRFHPILPSSAAMAGADIVVQSTHKTLPALTQGSMIHVKGDLVNP---DRVNE-------ALNLHQSTSPSYLILAS 262 (294)
T ss_pred hhhhccCcccCcchhhcCCcEEEEchhcccchHhHHHHHHhCCCcCCH---HHHHH-------HHHHHCCCCcHHHHHHH
Confidence 75 23344444568999999999998787777777776653321 00000 01223357888888899
Q ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHH
Q 012991 306 IPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLA 339 (452)
Q Consensus 306 ~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~ 339 (452)
+..+++++... |.+ ..++..++.+++++.|.
T Consensus 263 l~~a~~~~~~~--g~~-~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 263 LDVARAMMALE--GKE-LVEELIELALYARQEIN 293 (294)
T ss_pred HHHHHHHHHHH--hHH-HHHHHHHHHHHHHHHHh
Confidence 99998888653 544 56678888888888764
No 218
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.91 E-value=2.1e-22 Score=201.00 Aligned_cols=352 Identities=13% Similarity=0.040 Sum_probs=207.6
Q ss_pred CCeEEeccCCCCCCc---HHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh----C--CCCCCcEEEecChh
Q 012991 38 HGVARINNGSFGSCP---KSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI----N--ADDVGEISLVDNAT 108 (452)
Q Consensus 38 ~~~~~l~~~~~~~~p---~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~--~~~~~~i~~t~g~t 108 (452)
++++.|..+.+...| +.+.+++...+... ..+.....|....+..++|++|++++ | ++ +++|++|+|++
T Consensus 30 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~-~~~I~it~Ga~ 107 (416)
T PRK09440 30 PGAIMLGGGNPAHIPEMEDYFRDLLADLLASG-KLTEALGNYDGPQGKDELIEALAALLNERYGWNIS-PQNIALTNGSQ 107 (416)
T ss_pred CCceeccCCCCCccCCHHHHHHHHHHHHhcCc-ccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCC-hhhEEEccChH
Confidence 567899877765433 33445554443210 00111122444455677888888876 3 54 78999999999
Q ss_pred HHHHHHHHHhhcccccCCCCCCCEEEE-eCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCC-hHHH-HHHHHHHHhccc
Q 012991 109 TAAAIVLQQIGRGFTEGRFHRNDTVLM-LHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLAS-EEEI-INEFKKGIEKGK 185 (452)
Q Consensus 109 ~a~~~~~~~l~~~~~~~~~~~g~~Vl~-~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~-~~~~-~~~l~~~i~~~~ 185 (452)
+++.+++.++.... ...+||.|++ .+|+|+.+...........+..+..+++ +.+. ...+ ++.|+ +
T Consensus 108 ~al~~~~~~l~~~~---~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~l~--~---- 176 (416)
T PRK09440 108 SAFFYLFNLFAGRR---ADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELL--PEGQFKYHVDFEHLH--I---- 176 (416)
T ss_pred HHHHHHHHHHhccc---cCCCCCeEEEecCCCchhhHHHhhccCceeecccccccc--cccccccCCCHHHcc--c----
Confidence 99999999873100 0035889999 6999987654322110001122222222 1111 1123 66665 3
Q ss_pred cCCCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCccc---cccc--cCccEEEEcCcccCcC
Q 012991 186 KDGKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSIKI---DVKE--IGADFYVSNLHKWFFC 257 (452)
Q Consensus 186 ~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~~~---~~~~--~~~d~~~~s~~K~l~g 257 (452)
..+++++++++|+||||.+++ +++|+++|+++++ ++|+|++++...... +... .+--+++.|++|. +
T Consensus 177 --~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~-~iI~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK~--~ 251 (416)
T PRK09440 177 --DEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNI-PLLIDNAYGPPFPGIIFSEATPLWNPNIILCMSLSKL--G 251 (416)
T ss_pred --CCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCC-cEEEeCCccccCCCcchhhcCccccCCeEEEeccccc--C
Confidence 357899999999999999998 4577888999999 799999986422111 1111 1234777899994 5
Q ss_pred CCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCH-----HHHHHHHHHH
Q 012991 258 PPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGI-----DGIMQRNHEQ 330 (452)
Q Consensus 258 ~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~-----~~~~~~~~~~ 330 (452)
.+| +|++++++++++. + .... ..+..+.+...+.+ +..++.. +.+ +.+++.++++
T Consensus 252 ~pGlRiG~~i~~~~l~~~-~-~~~~-----------~~~~~~~s~~~q~~---~~~~l~~--~~~~~~~~~~~~~~~~~r 313 (416)
T PRK09440 252 LPGVRCGIVIADEEIIEA-L-SNMN-----------GIISLAPGRLGPAI---AAEMIES--GDLLRLSETVIRPFYRQK 313 (416)
T ss_pred CCcceEEEEeCCHHHHHH-H-HHHH-----------HHhccCCCcHHHHH---HHHHhcc--chHHHHHHHHHHHHHHHH
Confidence 566 8998888777765 1 1110 00011223333333 3333332 011 1244455666
Q ss_pred HHHHHHHHHHHc-C--CCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCC
Q 012991 331 ALKMARMLANAW-G--TSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARD 407 (452)
Q Consensus 331 ~~~l~~~L~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~ 407 (452)
++.+.+.|.+.. + +.+..|.+ +.++|+.++.. ..+..++.+.|.+ .||.+.++..+......
T Consensus 314 ~~~~~~~L~~~l~~~~~~~~~p~g--g~fiw~~~~~~-----~~~~~~~~~~l~~-~gV~v~pg~~F~~~~~~------- 378 (416)
T PRK09440 314 VQLAIALLRRYLPDEPCLIHKPEG--AIFLWLWFKDL-----PITTEELYQRLKA-RGVLVVPGHYFFPGLDE------- 378 (416)
T ss_pred HHHHHHHHHHhcccCCeEEecCCC--ceEEEEECCCC-----CCCHHHHHHHHHH-CCEEEechHhhCCCCcc-------
Confidence 677777776642 2 33334443 78899988620 2456788888865 59999876554210000
Q ss_pred CCCCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 408 KDGIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 408 ~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
......+++|||++. +.++++.++++|+++++.
T Consensus 379 ~~~~~~~~iRis~~~--~~~~l~~~i~~l~~~~~~ 411 (416)
T PRK09440 379 DWPHAHQCIRMNYVQ--DDEEIEKGIAILAEEVEK 411 (416)
T ss_pred ccCCcCceEEEEecC--CHHHHHHHHHHHHHHHHH
Confidence 000113689999984 789999999999998865
No 219
>PLN02368 alanine transaminase
Probab=99.91 E-value=6e-23 Score=202.25 Aligned_cols=323 Identities=15% Similarity=0.121 Sum_probs=205.8
Q ss_pred hhcCCCccccccCCCCCCCCCHHHHHhhhccCCCCeEEeccCCCC--------C-----------------------CcH
Q 012991 5 ARNGELTHHVSKKPKLTRCISEAEIRDEFSHHQHGVARINNGSFG--------S-----------------------CPK 53 (452)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~~~~~~~~l~~~~~~--------~-----------------------~p~ 53 (452)
+.+=+.++++++...++....+....++....+.++++|+.|.+. . +|+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~ 84 (407)
T PLN02368 5 ALDYESLNENVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPAD 84 (407)
T ss_pred CCChhhcCHHHHhhhhhcCCHHHHHHHHHHHHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHH
Confidence 344445566666666666666766666665567789999988874 1 333
Q ss_pred HHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh----CCC-CCCcEEEecChhHHHHHHHHHhhcccccCCCC
Q 012991 54 SVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI----NAD-DVGEISLVDNATTAAAIVLQQIGRGFTEGRFH 128 (452)
Q Consensus 54 ~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~-~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~ 128 (452)
.+.+++.. +.. .......|....+..++|+++++++ |.+ ++++|++|+|+++++..++.++. .+
T Consensus 85 ~i~~a~~~-l~~---~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~-------~~ 153 (407)
T PLN02368 85 AIARAKHY-LSL---TSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVI-------RG 153 (407)
T ss_pred HHHHHHHH-Hhc---CCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHc-------CC
Confidence 33333322 211 1111223444556677888888877 532 37899999999999999998762 26
Q ss_pred CCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccc
Q 012991 129 RNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVI 207 (452)
Q Consensus 129 ~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~ 207 (452)
+||+|++++|.|+.....+ ...|.+++.+++.. ++...+ ++.+++.++.......+++++++++|+||||.++
T Consensus 154 pGd~Vli~~P~Y~~y~~~~----~~~g~~~v~v~~~~--~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~ 227 (407)
T PLN02368 154 EKDGVLVPVPQYPLYSATI----SLLGGTLVPYYLEE--SENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCL 227 (407)
T ss_pred CCCEEEEeCCCCccHHHHH----HHcCCEEEEEeccc--ccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccC
Confidence 8999999999999876555 44689999886531 122334 8999998853211123799999999999999999
Q ss_pred cH---HHHHHHHHHcCCCEEEEecccccCCc----c-cc-------cc----ccCccEEEEcCcccCcCCCC--cEEEEE
Q 012991 208 PV---RKLVKICRDEGVDQVFVDAAHAMGSI----K-ID-------VK----EIGADFYVSNLHKWFFCPPS--VAFLYC 266 (452)
Q Consensus 208 ~l---~~i~~l~~~~~~~~~ivD~a~~~g~~----~-~~-------~~----~~~~d~~~~s~~K~l~g~~G--~G~l~~ 266 (452)
+. ++|+++|++|++ ++|+|+++..... + .. +. ..+.-+++.|+||.++|.+| +|++++
T Consensus 228 s~e~l~~l~~~a~~~~~-~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~ 306 (407)
T PLN02368 228 SEANLREILKFCYQERL-VLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEM 306 (407)
T ss_pred CHHHHHHHHHHHHHcCC-EEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEE
Confidence 85 467888999999 7999999764221 1 11 10 01134677899997546777 788874
Q ss_pred ---ecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHH-------HHhhcCHHHHHHHHHHHHHHHHH
Q 012991 267 ---RKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFV-------SRFEGGIDGIMQRNHEQALKMAR 336 (452)
Q Consensus 267 ---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~-------~~~~~g~~~~~~~~~~~~~~l~~ 336 (452)
++++++. +. .... ...+.+...+.++.++++.- ..+.+..+.+++.++++++.+.+
T Consensus 307 ~~~~~~li~~-~~-~~~~------------~~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~ 372 (407)
T PLN02368 307 TNIPPKTVEE-IY-KVAS------------IALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTD 372 (407)
T ss_pred eCCCHHHHHH-HH-HHhc------------ccCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5556554 11 1100 01223444444444444210 00001224567788899999999
Q ss_pred HHHHHcCCCcCCCcccccceEEEEc
Q 012991 337 MLANAWGTSLGSPPEICAAMVMVGL 361 (452)
Q Consensus 337 ~L~~~~~~~~~~~~~~~~~~~~~~~ 361 (452)
.|.+++|+.+..|++ ++++|..+
T Consensus 373 ~L~~~~g~~~~~P~G--afy~~~~i 395 (407)
T PLN02368 373 GFNSCKNVVCNFTEG--AMYSFPQI 395 (407)
T ss_pred HHhCCCCeEeCCCCe--eeEeccCC
Confidence 999988887766655 66666544
No 220
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.91 E-value=3.8e-22 Score=196.88 Aligned_cols=313 Identities=16% Similarity=0.186 Sum_probs=197.7
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|.+...+..+++++.+++++|++ ..++++||+.|+.+++.++ +++||+|+++.+.|......+...+..
T Consensus 59 y~r~~~p~~~~le~~lA~l~g~~---~~i~~~sG~~Al~~~l~~l--------l~~Gd~Viv~~~~y~~t~~~~~~~~~~ 127 (403)
T PRK07503 59 YSRISNPTLALLEQRMASLEGGE---AAVALASGMGAITATLWTL--------LRPGDEVIVDQTLYGCTFAFLHHGLGE 127 (403)
T ss_pred eeCCCCchHHHHHHHHHHHhCCC---cEEEEcCHHHHHHHHHHHH--------cCCCCEEEEccCccchHHHHHHHHHhh
Confidence 44445566899999999999995 3567778889999998865 589999999999997665555544577
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|++++.+++ ++ ++++++++ .+++++|++++++||+|.+.|+++|.++|+++|+ ++|+|++++.+
T Consensus 128 ~G~~v~~vd~----~d----~~~l~~~i------~~~tklV~le~p~NPtG~~~di~~I~~la~~~gi-~lIvD~a~a~~ 192 (403)
T PRK07503 128 FGVTVRHVDL----TD----PAALKAAI------SDKTRMVYFETPANPNMRLVDIAAVAEIAHGAGA-KVVVDNTYCTP 192 (403)
T ss_pred CCEEEEEeCC----CC----HHHHHHhc------CccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCC-EEEEECCCccc
Confidence 8999999843 32 68888888 5689999999999999999999999999999999 89999999876
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHH
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVT 311 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 311 (452)
.....+ ..++|+++.|++|+++|+.+ .|+++.++++.++ +....... ..|... +-.....++.
T Consensus 193 ~~~~~l-~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~-l~~~~~~~-----------~~g~~~--s~~~a~l~l~ 257 (403)
T PRK07503 193 YLQRPL-ELGADLVVHSATKYLGGHGDITAGLVVGGKALADR-IRLEGLKD-----------MTGAVM--SPFDAFLLMR 257 (403)
T ss_pred ccCCch-hhCCCEEEccccccccCCCceeEEEEEcCHHHHHH-HHhhhHHh-----------CcCCCC--CHHHHHHHHc
Confidence 543222 35789999999998665433 5888777766554 11000000 001111 1111122223
Q ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc--------------ccccceEEEEcCCccccCChhhHHHH
Q 012991 312 FVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP--------------EICAAMVMVGLPSRLRVMGEDDALRL 376 (452)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~l 376 (452)
.++. +....++..+++..+.+.|.+.+.++ +..|. ...++++.|.++. +......+
T Consensus 258 ~L~t----l~~r~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~-----~~~~~~~~ 328 (403)
T PRK07503 258 GLKT----LALRMDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKG-----GIAAGRRF 328 (403)
T ss_pred Ccch----HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECC-----CHHHHHHH
Confidence 3332 33344556688888999998877654 32221 0247788888751 11234455
Q ss_pred HHHHhhhcceEeeecccC-----CCCCCCCCCC--CCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 377 RGHLRVRFGVEVPIHYQA-----PKDDGQPQAG--ARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 377 ~~~L~~~~gI~v~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
.+.|. -+......+... +..-.+.... .+++.+..++.||+|++. ||++.+++.|++.++
T Consensus 329 ~~~l~-l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~Al~ 395 (403)
T PRK07503 329 MNALQ-LFARAVSLGDAESLAQHPASMTHSTYTPEERAEHGISEGLVRLSVGL----EDVADILADLAQALD 395 (403)
T ss_pred HHhCC-cceeecccCCCCccCcCCCCCccccCCHHHHHhcCCCCCeEEEEEec----CCHHHHHHHHHHHHH
Confidence 55552 222222111100 0000000000 011235567899999985 445555555555544
No 221
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.91 E-value=3.2e-22 Score=197.02 Aligned_cols=314 Identities=13% Similarity=0.149 Sum_probs=205.9
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|++...+..+++++.++++.|.+ ..+++++|+.|+..++.++ +++||+|+++...|.+.+..+..++..
T Consensus 64 Y~r~~~p~~~~le~~lA~l~g~~---~al~~~sG~~Ai~~~l~al--------l~~Gd~Vl~~~~~~~~t~~~~~~~~~~ 132 (403)
T PRK07810 64 YSRYGNPTVSMFEERLRLIEGAE---ACFATASGMSAVFTALGAL--------LGAGDRLVAARSLFGSCFVVCNEILPR 132 (403)
T ss_pred eeCCCCchHHHHHHHHHHHhCCC---cEEEECChHHHHHHHHHHH--------hCCCCEEEEccCCcchHHHHHHHHHHH
Confidence 34344556889999999999984 7788899999999988876 589999999998888777777666778
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|++++.++ .++ ++++++++ ++++++|++++++||+|.+.|+++|+++|+++|+ ++++|++++.+
T Consensus 133 ~G~~v~~vd----~~d----~~~l~~ai------~~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~-~vivD~a~a~~ 197 (403)
T PRK07810 133 WGVETVFVD----GED----LSQWEEAL------SVPTQAVFFETPSNPMQSLVDIAAVSELAHAAGA-KVVLDNVFATP 197 (403)
T ss_pred cCcEEEEEC----CCC----HHHHHHhc------CcCceEEEEECCCCCCCeecCHHHHHHHHHHcCC-EEEEECCCCcc
Confidence 899999994 222 68888888 5789999999999999999999999999999999 89999999877
Q ss_pred CccccccccCccEEEEcCcccCcCCCC---cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHH
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS---VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAV 310 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G---~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 310 (452)
...... ..++|+++.|++|++.| +| .|+++.+++.+...+ ..+.. .. |... +-.....++
T Consensus 198 ~~~~~~-~~gaDivv~S~tK~l~g-~g~~~gG~v~~~~~~~~~~l-~~~~~-~~-----------g~~~--s~~~a~l~l 260 (403)
T PRK07810 198 LLQRGL-PLGADVVVYSGTKHIDG-QGRVLGGAILGDREYIDGPV-QKLMR-HT-----------GPAL--SAFNAWVLL 260 (403)
T ss_pred ccCChh-hcCCcEEEccCCceecC-CcCceeEEEEeChHHHHHHH-HHHHH-Hh-----------CCCC--CHHHHHHHH
Confidence 653222 45799999999998544 44 477877776554201 11100 00 1111 111112233
Q ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCC-----c---------ccccceEEEEcCCccccCChhhHHH
Q 012991 311 TFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSP-----P---------EICAAMVMVGLPSRLRVMGEDDALR 375 (452)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~-----~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (452)
.-++ .+....++..+++..+.+.|++.+.+. |..| + ...++++.|.++..... +...+.+
T Consensus 261 ~~L~----tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~-~~~~~~~ 335 (403)
T PRK07810 261 KGLE----TLALRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDA-AKKRAFE 335 (403)
T ss_pred hccC----cHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCc-CHHHHHH
Confidence 3333 345556777888888999999887764 4433 1 12477888988510000 0123456
Q ss_pred HHHHHhhhcceEeeecccC-----CCCCCCCCCC--CCCCCCCccceEEecccccCCHHHHHHHHHHHHHHH
Q 012991 376 LRGHLRVRFGVEVPIHYQA-----PKDDGQPQAG--ARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLV 440 (452)
Q Consensus 376 l~~~L~~~~gI~v~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~ 440 (452)
+++.|. -+.+.+..+... +..-.+.... .+.+.+..++.+|+|++. |+++.+++.|.+.+
T Consensus 336 f~~~l~-l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~lvR~svGl----E~~~dli~dl~~Al 402 (403)
T PRK07810 336 VLDKLR-VIDISNNLGDAKSLITHPATTTHRAMGPEGRAAIGLGDGVVRLSVGL----EDTDDLIADLDRAL 402 (403)
T ss_pred HHHhCC-ceEEeccCCCCcceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHhh
Confidence 666663 234333322110 0000000000 011225567899999984 56777777776654
No 222
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.90 E-value=3.7e-22 Score=195.20 Aligned_cols=309 Identities=15% Similarity=0.166 Sum_probs=199.6
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|++...+....++++++++.|.+ ..+++++|+.|+.+++. + +++||+|+++++.|++....+..++.+
T Consensus 44 y~r~~~p~~~~Le~~la~l~g~~---~al~~~SG~~Al~~~l~-~--------l~pGd~Vi~~~~~y~~t~~~~~~~~~~ 111 (380)
T PRK06176 44 YSRSGNPTRFALEELIADLEGGV---KGFAFASGLAGIHAVFS-L--------FQSGDHVLLGDDVYGGTFRLFDKVLVK 111 (380)
T ss_pred ccCCCChhHHHHHHHHHHHhCCC---CEEEECCHHHHHHHHHH-H--------cCCCCEEEEcCCChhHHHHHHHHHHHh
Confidence 44444566889999999999985 34666777889887664 3 489999999999999888888776788
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|++++.++. .+ ++++++++ .+++++|++++|+||+|.+.|+++|.++|+++|+ ++|+|++++.+
T Consensus 112 ~gi~v~~vd~----~d----~e~l~~ai------~~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi-~vivD~t~a~~ 176 (380)
T PRK06176 112 NGLSCTIIDT----SD----LSQIKKAI------KPNTKALYLETPSNPLLKITDLAQCASVAKDHGL-LTIVDNTFATP 176 (380)
T ss_pred cCeEEEEcCC----CC----HHHHHHhc------CcCceEEEEECCCCCCceecCHHHHHHHHHHcCC-EEEEECCcccc
Confidence 8999998843 22 68888888 5789999999999999999999999999999999 89999999876
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEEecCcc-ccCCCCCceeccCCCCcccccccccccCccccccHHHHH
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRKSIL-SSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAV 310 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 310 (452)
...... .+++|++++|++|++.|+.. .|+++.+++.+ .+ + ... ... .|.. .+...+.
T Consensus 177 ~~~~p~-~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~-~-~~~-~~~-----------~G~~-----~~~~~~~ 236 (380)
T PRK06176 177 YYQNPL-LLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQE-I-AFF-QNA-----------IGGV-----LGPQDSW 236 (380)
T ss_pred ccCCcc-ccCCCEEEecCceeccCCccceeeEEEecHHHHHHH-H-HHH-HHH-----------hcCC-----CCHHHHH
Confidence 543332 46899999999999777643 46677654333 32 1 110 000 0100 0001111
Q ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc--------------ccccceEEEEcCCccccCChhhHHH
Q 012991 311 TFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP--------------EICAAMVMVGLPSRLRVMGEDDALR 375 (452)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (452)
.....+ ..+....++..+++..+.+.|++.+.+. ++.|. ...++++.|.+. +.....+
T Consensus 237 l~~~gl-~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~------~~~~~~~ 309 (380)
T PRK06176 237 LLQRGI-KTLGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLK------NDSEAVA 309 (380)
T ss_pred HHHhcc-CcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC------CHHHHHH
Confidence 111100 1234445566777888888898876653 33221 124788999885 2334556
Q ss_pred HHHHHhhhcceEeeecccC-----CCCCCCCCCC-C-CCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 376 LRGHLRVRFGVEVPIHYQA-----PKDDGQPQAG-A-RDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 376 l~~~L~~~~gI~v~~~~~~-----~~~~~~~~~~-~-~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
+++.|. -+.+.+..+... +....+.... . ++..+..++.||+|++. ||++.+++.|++.++
T Consensus 310 f~~~l~-~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dli~dl~~Al~ 377 (380)
T PRK06176 310 FVESLK-LFILGESLGGVESLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVGI----EHEQDLLEDLEQAFA 377 (380)
T ss_pred HHHcCC-cceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCcCeEEEEecc----CCHHHHHHHHHHHHh
Confidence 777763 344444332111 0000000000 0 11225567899999984 566667776666654
No 223
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.90 E-value=1.1e-21 Score=194.77 Aligned_cols=324 Identities=17% Similarity=0.175 Sum_probs=207.0
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|.+...+....+++.++++.|.+ ..+++++|++|+.+++.++ +++||+|+++.+.|.+....+...+..
T Consensus 57 y~r~~~p~~~~le~~lA~l~g~~---~al~~~SG~~Ai~~al~al--------l~pGd~VIv~~~~y~~t~~~~~~~~~~ 125 (427)
T PRK05994 57 YTRITNPTNAVLEERVAALEGGT---AALAVASGHAAQFLVFHTL--------LQPGDEFIAARKLYGGSINQFGHAFKS 125 (427)
T ss_pred eECCCCccHHHHHHHHHHHhCCC---cEEEEcCHHHHHHHHHHHH--------hCCCCEEEEecCcchhHHHHHHHHHHh
Confidence 44444556788999999999985 4788899999999999876 589999999999999887777666677
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|++++.++ .++ ++++++++ ++++++|++++++||+|.+.|+++|.++|+++|+ ++++|++++.+
T Consensus 126 ~G~~v~~vd----~~d----~~~l~~ai------~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi-~livD~a~a~~ 190 (427)
T PRK05994 126 FGWQVRWAD----ADD----PASFERAI------TPRTKAIFIESIANPGGTVTDIAAIAEVAHRAGL-PLIVDNTLASP 190 (427)
T ss_pred cCcEEEEEC----CCC----HHHHHHhc------CcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCC-EEEEECCcccc
Confidence 899999984 332 57888888 5789999999999999999999999999999999 79999999877
Q ss_pred CccccccccCccEEEEcCcccCcCCCC-cEEEEEecCcccc--CCCCCceec---cCCCCccc-c---------------
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS-VAFLYCRKSILSS--DMHHPVVSH---EFGNGLPI-E--------------- 291 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G-~G~l~~~~~~~~~--~l~~~~~~~---~~~~~~~~-~--------------- 291 (452)
.... ...+++|+++.|++|+++|+.+ +|.+++....... .-..+.+.. ..+ +... +
T Consensus 191 ~~~~-pl~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 268 (427)
T PRK05994 191 YLIR-PIEHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYH-GLVLHETFGNFAFAIAARVLG 268 (427)
T ss_pred ccCC-ccccCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhh-hhhHHHHhhhhhhHHHHHHHH
Confidence 6432 2346899999999998665544 5555553221110 000000000 000 0000 0
Q ss_pred cccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc---------------ccccc
Q 012991 292 SAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP---------------EICAA 355 (452)
Q Consensus 292 ~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~---------------~~~~~ 355 (452)
....|.. .+-...+..++-++ .++...++..+++..+.+.|++.|.++ +..|. ...++
T Consensus 269 ~~~~G~~--~~~~~A~l~~~~l~----tL~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~~~~~~~~~~~~~~~g~g~ 342 (427)
T PRK05994 269 LRDLGPA--ISPFNAFLILTGIE----TLPLRMQRHSDNALAVAEWLKGHPKVSWVNYAGLPDDPYHALAQKYSPKGAGA 342 (427)
T ss_pred HHhcCCC--CCHHHHHHHHcCcc----cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhcCCCceE
Confidence 0001111 00011111222222 356667777889999999999988764 43331 12477
Q ss_pred eEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccC-----CCCCCCCCCCC--CCCCCCccceEEecccccCCHHH
Q 012991 356 MVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQA-----PKDDGQPQAGA--RDKDGIITGYARISHQVYNTLED 428 (452)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~-----~~~~~~~~~~~--~~~~~~~~~~iRis~~~~~t~~d 428 (452)
++.|.+.. +.....++.+.|. -+.+.+..+... +....+..... ++..+..++.||+|++. ||
T Consensus 343 ~~sf~l~~-----~~~~~~~~~~~l~-l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----E~ 412 (427)
T PRK05994 343 VFTFGLKG-----GYEAGVKLVSSLK-LFSHLANIGDTRSLVIHPASTTHRQLTDEQKVAAGAGPDVVRLSIGI----ED 412 (427)
T ss_pred EEEEEecC-----CHHHHHHHHHhCC-cceeccccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCcEEEEecc----CC
Confidence 88998851 1234556777763 345444332111 00000101000 11124557899999984 56
Q ss_pred HHHHHHHHHHHHh
Q 012991 429 YEKFRDAVILLVE 441 (452)
Q Consensus 429 i~~l~~~l~~~~~ 441 (452)
.+.+++.|++.++
T Consensus 413 ~~dli~dl~~Al~ 425 (427)
T PRK05994 413 VDDIIADLEQALA 425 (427)
T ss_pred HHHHHHHHHHHHh
Confidence 6667777776664
No 224
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.90 E-value=2e-21 Score=190.85 Aligned_cols=321 Identities=16% Similarity=0.130 Sum_probs=212.4
Q ss_pred HHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEE
Q 012991 80 KGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVV 159 (452)
Q Consensus 80 ~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~ 159 (452)
+...++++.+++++|++ .+++++|||+|+.+++.++ .+++||+|++++++|.+...++ ...|++++
T Consensus 33 ~~~~~le~~la~~~g~~---~~v~~~sgt~al~lal~al-------~~~~Gd~Viv~~~~~~~~~~~~----~~~G~~~v 98 (379)
T PRK11658 33 PKNQALEQAFCQLTGNQ---HAIAVSSATAGMHITLMAL-------GIGPGDEVITPSLTWVSTLNMI----VLLGATPV 98 (379)
T ss_pred HhHHHHHHHHHHHhCCC---eEEEECCHHHHHHHHHHHc-------CCCCCCEEEECCCcHHHHHHHH----HHcCCEEE
Confidence 45799999999999995 5788999999999999876 2589999999999999886655 44699999
Q ss_pred EEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccc-
Q 012991 160 EVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKI- 237 (452)
Q Consensus 160 ~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~- 237 (452)
.++++. +...+ ++++++++ ++++++|+.+| ++|...|+++|.++|+++|+ ++|+|++|+.|....
T Consensus 99 ~vd~~~---~~~~~d~~~l~~~i------~~~tkav~~~~---~~G~~~d~~~i~~~a~~~gi-~vi~D~a~a~g~~~~~ 165 (379)
T PRK11658 99 MVDVDR---DTLMVTPEAIEAAI------TPRTKAIIPVH---YAGAPADLDAIRAIGERYGI-PVIEDAAHAVGTYYKG 165 (379)
T ss_pred EEecCC---CcCCcCHHHHHHhc------ccCCeEEEEeC---CCCCcCCHHHHHHHHHHcCC-eEEEECCCccCCeECC
Confidence 996531 11224 88999988 57899988554 58999999999999999999 799999999887643
Q ss_pred -cccccCccEEEEcCcccCcCCCCcEEEEEe-cCccccCCCCCceeccCCCCc-----------c-cccccccccCcccc
Q 012991 238 -DVKEIGADFYVSNLHKWFFCPPSVAFLYCR-KSILSSDMHHPVVSHEFGNGL-----------P-IESAWIGTRDYSAQ 303 (452)
Q Consensus 238 -~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~-~~~~~~~l~~~~~~~~~~~~~-----------~-~~~~~~~~~~~~~~ 303 (452)
.....+.++++++.+|.+.++.| |+++.+ +++.++ + ..... .|... + ......|... .+
T Consensus 166 ~~~g~~g~~~~Sf~~~K~l~~g~G-G~v~~~~~~~~~~-~-~~~~~--~G~~~~~~~~~~~~~~~~~~~~~~G~n~--~~ 238 (379)
T PRK11658 166 RHIGARGTAIFSFHAIKNITCAEG-GLVVTDDDELADR-L-RSLKF--HGLGVDAFDRQTQGRAPQAEVLTPGYKY--NL 238 (379)
T ss_pred eecCCCCCEEEeCCCCCcCcccCc-eEEEECCHHHHHH-H-HHHHH--cCCCcchhhhhcccCCCcceeecccccc--Cc
Confidence 24445667888888898877665 766665 444443 1 11110 11100 0 0001112211 23
Q ss_pred ccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcc--c-ccceEEEEcCCccccCChhhHHHHHHHH
Q 012991 304 LVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPE--I-CAAMVMVGLPSRLRVMGEDDALRLRGHL 380 (452)
Q Consensus 304 ~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~l~~~L 380 (452)
..+.+|+...... +++.+.++.+++++++.+.|..++...+..+.. . ....+.+.++.. ..+.+.+++.+.|
T Consensus 239 ~~l~AAl~~~ql~--~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~r~~~~~~L 313 (379)
T PRK11658 239 ADINAAIALVQLA--KLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEE---RCGISRDALMEAL 313 (379)
T ss_pred CHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCc---cccCCHHHHHHHH
Confidence 3456666655543 788888999999999999998775333333221 1 123444554310 0134678899999
Q ss_pred hhhcceEeeecccCCCCCCCCCC-CCCCCC----CCccceEEecccccCCHHHHHHHHHHHHHHH
Q 012991 381 RVRFGVEVPIHYQAPKDDGQPQA-GARDKD----GIITGYARISHQVYNTLEDYEKFRDAVILLV 440 (452)
Q Consensus 381 ~~~~gI~v~~~~~~~~~~~~~~~-~~~~~~----~~~~~~iRis~~~~~t~~di~~l~~~l~~~~ 440 (452)
.+ .||.++..+.+.+.-..-.. .-...+ ......+.+.++...|++|++++++.|++++
T Consensus 314 ~~-~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 314 KE-RGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQIA 377 (379)
T ss_pred HH-CCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 76 49987655433221000000 000000 1123467777777789999999999999875
No 225
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.90 E-value=4e-22 Score=194.77 Aligned_cols=307 Identities=15% Similarity=0.146 Sum_probs=197.2
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|.+...+..+++++.++++.|++ ..++++||++|+.+++. + +++||+|+++++.|++....+......
T Consensus 46 y~r~~~pt~~~le~~la~l~g~~---~~~~~~sG~~ai~~~~~-l--------l~~Gd~Vl~~~~~y~~t~~~~~~~~~~ 113 (366)
T PRK08247 46 YSRTGNPTRGVLEQAIADLEGGD---QGFACSSGMAAIQLVMS-L--------FRSGDELIVSSDLYGGTYRLFEEHWKK 113 (366)
T ss_pred ccCCCCchHHHHHHHHHHHhCCC---cEEEEcCHHHHHHHHHH-H--------hCCCCEEEEecCCcCcHHHHHHHHhhc
Confidence 45555667899999999999995 34778888999987764 3 478999999999999877777665677
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|++++.++. .+ ++.+++++ .+++++|++++|+||+|...++++|+++|+++|+ ++++|++++.+
T Consensus 114 ~G~~v~~vd~----~d----~~~l~~~i------~~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~-~lIvD~t~~~~ 178 (366)
T PRK08247 114 WNVRFVYVNT----AS----LKAIEQAI------TPNTKAIFIETPTNPLMQETDIAAIAKIAKKHGL-LLIVDNTFYTP 178 (366)
T ss_pred cCceEEEECC----CC----HHHHHHhc------ccCceEEEEECCCCCCCcHHHHHHHHHHHHHcCC-EEEEECCCccc
Confidence 8999999843 22 67888888 5689999999999999999999999999999999 79999998665
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEEe-cCccccCCCCCceeccCCCCcccccccccccCccccccHHHHH
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCR-KSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAV 310 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 310 (452)
...... ..++|+++.|++|++.|+.+ .|+++.+ +++... + .... ...+ ...+... ...++
T Consensus 179 ~~~~p~-~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~-~-~~~~-~~~g----------~~~s~~~---a~l~~ 241 (366)
T PRK08247 179 VLQRPL-EEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCER-L-AYYQ-NAAG----------AVLSPFD---SWLLI 241 (366)
T ss_pred cccCch-hcCCcEEEeecceeccCCCceeeeEEecChHHHHHH-H-HHHH-HhcC----------CCCChHH---HHHHH
Confidence 432222 34789999999999776543 4676665 344332 1 1110 0000 1111111 11122
Q ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEee
Q 012991 311 TFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVP 389 (452)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~ 389 (452)
.-++ .+....++.+++++.+.+.|++.+++. +..|+. ++++.|.+. ......++.+.|. -+.+...
T Consensus 242 ~~l~----tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~--gg~~sf~~~------~~~~~~~~~~~l~-~~~~~~s 308 (366)
T PRK08247 242 RGMK----TLALRMRQHEENAKAIAAFLNEQPGVTDVLYPGR--GGMLSFRLQ------DEEWVNPFLKSLK-LITFAES 308 (366)
T ss_pred hccC----cHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCc--CcEEEEEEC------CHHHHHHHHHcCC-cceEccC
Confidence 2222 233445567889999999999988875 444433 678888774 1222334555442 1222221
Q ss_pred eccc-----CCCCCCC--CCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 390 IHYQ-----APKDDGQ--PQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 390 ~~~~-----~~~~~~~--~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
.+.. .+....+ .....+...+..++.+|+|++. |+++.+++.|++.++
T Consensus 309 lg~~~sl~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGl----E~~~dl~~dl~~al~ 363 (366)
T PRK08247 309 LGGVESFITYPATQTHADIPEEIRIANGVCNRLLRFSVGI----ENVEDLIADLKQAFK 363 (366)
T ss_pred CCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHh
Confidence 1100 0000000 0000011124557799999984 566667777766664
No 226
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.90 E-value=1e-22 Score=197.90 Aligned_cols=273 Identities=17% Similarity=0.154 Sum_probs=185.4
Q ss_pred hhhhhHHHHHHHHHHHhHhCCCC------CCcEEEecChhHHHHHHHHHhhccccc----CCCC--CCCEEEEeCCcchh
Q 012991 75 FNSLRKGILESRAAVKDLINADD------VGEISLVDNATTAAAIVLQQIGRGFTE----GRFH--RNDTVLMLHCAFQA 142 (452)
Q Consensus 75 ~~~~~~~~~~~~~~la~~~~~~~------~~~i~~t~g~t~a~~~~~~~l~~~~~~----~~~~--~g~~Vl~~~~~~~s 142 (452)
.....++..++.+++++++|.++ ...-++|+|||+++..++.+....+.. .... +.-.|++++..|.|
T Consensus 74 ~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S 153 (373)
T PF00282_consen 74 SPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYS 153 (373)
T ss_dssp SHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-TH
T ss_pred ccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccH
Confidence 35667888999999999999972 135789999999999988766443311 0011 12267778889999
Q ss_pred HHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCC
Q 012991 143 VKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGV 221 (452)
Q Consensus 143 ~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~ 221 (452)
+.++... .|+.++.+ +.++++.+ +++|+++|++....+..|.+|+.+.+++.+|.+.|+++|+++|+++++
T Consensus 154 ~~Kaa~~----lGlg~~~I----~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~ 225 (373)
T PF00282_consen 154 IEKAARI----LGLGVRKI----PTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNI 225 (373)
T ss_dssp HHHHHHH----TTSEEEEE-----BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-
T ss_pred HHHhcce----eeeEEEEe----cCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccce
Confidence 8877655 59999999 45555665 888888887654444567789999999999999999999999999999
Q ss_pred CEEEEecccccCCc------cccccccCccEEEEcCcccCcCCCCcEEEEEecCccc-cCC--CCCceeccC-CCCcc--
Q 012991 222 DQVFVDAAHAMGSI------KIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILS-SDM--HHPVVSHEF-GNGLP-- 289 (452)
Q Consensus 222 ~~~ivD~a~~~g~~------~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~-~~l--~~~~~~~~~-~~~~~-- 289 (452)
++|||+|++.... +....-..+|.++.++|||++.|.++|++++|+.... ..+ ...|+.... ..+..
T Consensus 226 -wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~ 304 (373)
T PF00282_consen 226 -WLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYD 304 (373)
T ss_dssp -EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGC
T ss_pred -eeeecccccccccccccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccccccccccc
Confidence 5999999876332 1122223689999999999999999999999875432 100 112211000 00000
Q ss_pred -cccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEc
Q 012991 290 -IESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGL 361 (452)
Q Consensus 290 -~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~ 361 (452)
......++. -...+.++..++.+..- |+.+..++..++++++.+.|.+.+++++..++. .++++|++
T Consensus 305 ~~~~tl~~SR-~~~alk~w~~l~~~G~~--G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~--~~~vcFr~ 372 (373)
T PF00282_consen 305 YGDYTLQGSR-RFRALKLWATLKSLGRE--GYRERIRRCIELARYLADRLRKDPRFELVNEPD--LNIVCFRY 372 (373)
T ss_dssp EEEGSSSSSG-HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTS--SSEEEEEE
T ss_pred cccccccccc-cchHHHHHHHHHhcCHH--HHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCC--ceEEEEEe
Confidence 111111222 22334455556655543 888889999999999999999998899888665 77888876
No 227
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.90 E-value=5.2e-22 Score=194.17 Aligned_cols=308 Identities=15% Similarity=0.181 Sum_probs=199.3
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|.+...+...++++.++++.|.+ . .+++++|+.++..++. + +++||+|+++++.|++.+..+..++.+
T Consensus 44 y~r~~~p~~~~Le~~lA~l~g~~--~-~~~~~sG~aai~~~~~-~--------l~~Gd~Viv~~~~y~~~~~~~~~~~~~ 111 (377)
T PRK07671 44 YSRTGNPTRAALEELIAVLEGGH--A-GFAFGSGMAAITAVMM-L--------FSSGDHVILTDDVYGGTYRVMTKVLNR 111 (377)
T ss_pred cCCCCChHHHHHHHHHHHHhCCC--c-eEEeCCHHHHHHHHHH-H--------hCCCCEEEECCCccchHHHHHHHHHhc
Confidence 44445667899999999999985 3 4556777778776654 3 489999999999999877777665677
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|++++.++ ..+ ++++++++ .+++++|++++|+||+|.+.|+++|.++|+++|+ ++++|++++.+
T Consensus 112 ~G~~v~~v~----~~d----~~~l~~ai------~~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~-~lvvD~a~~~~ 176 (377)
T PRK07671 112 FGIEHTFVD----TSN----LEEVEEAI------RPNTKAIYVETPTNPLLKITDIKKISTIAKEKGL-LTIVDNTFMTP 176 (377)
T ss_pred CCeEEEEEC----CCC----HHHHHHhc------CCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCC-EEEEECCCCcc
Confidence 899999984 222 68888888 5789999999999999999999999999999999 79999998765
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEEec-CccccCCCCCceeccCCCCcccccccccccCccccccHHHHH
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRK-SILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAV 310 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 310 (452)
..... ..+++|++++|++|+++|+.+ .|++++++ ++.+. + ... ....| +..+. .....++
T Consensus 177 ~~~~p-~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~-~-~~~-~~~~g----------~~~~~---~~a~l~~ 239 (377)
T PRK07671 177 YWQSP-ISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAED-L-HFV-QNSTG----------GILGP---QDSWLLL 239 (377)
T ss_pred ccCCh-hhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHH-H-HHH-HHhhc----------CCCCH---HHHHHHH
Confidence 43222 245789999999999777653 46666654 34333 1 110 00000 11111 1111122
Q ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCC-CcCCCc--------------ccccceEEEEcCCccccCChhhHHH
Q 012991 311 TFVSRFEGGIDGIMQRNHEQALKMARMLANAWGT-SLGSPP--------------EICAAMVMVGLPSRLRVMGEDDALR 375 (452)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (452)
+-++ .+....++..+++..+.++|++.+++ .++.|. ...++++.|.+. +......
T Consensus 240 ~~l~----tl~~R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~------~~~~~~~ 309 (377)
T PRK07671 240 RGLK----TLGIRMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDVG------SEETANK 309 (377)
T ss_pred cCcC----hHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEeC------CHHHHHH
Confidence 2222 23445666778889999999987765 343331 124778888873 2334566
Q ss_pred HHHHHhhhcceEeeecccC-----CCCCCCCCCC--CCCCCCCccceEEecccccCCHHHHHHHHHHHHHHH
Q 012991 376 LRGHLRVRFGVEVPIHYQA-----PKDDGQPQAG--ARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLV 440 (452)
Q Consensus 376 l~~~L~~~~gI~v~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~ 440 (452)
+.+.|. -+.+.+..+... +....+.... .++..+..++.||+|++. ||.+.+++.|+..+
T Consensus 310 f~~~l~-l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al 376 (377)
T PRK07671 310 VLERLQ-YFTLAESLGAVESLISIPSQMTHASIPADRRKELGITDGLIRISVGI----EDGEDLIEDLAQAL 376 (377)
T ss_pred HHHhCC-cceEccCCCCCCeEeECCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHh
Confidence 767663 234444332210 0000000000 011225567899999984 56677777776654
No 228
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.90 E-value=1.4e-21 Score=193.27 Aligned_cols=331 Identities=13% Similarity=0.138 Sum_probs=206.8
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|++...+..+.+++.++++.|.+ ..+++++|++|+..++.++ +++||+|+++...|.+....+...+.+
T Consensus 63 Ysr~~~p~~~~Le~~lA~l~g~~---~av~~sSG~aAi~~al~al--------l~~Gd~Vv~~~~~y~~t~~~~~~~l~~ 131 (436)
T PRK07812 63 YTRIMNPTQDVVEQRIAALEGGV---AALLLASGQAAETFAILNL--------AGAGDHIVSSPRLYGGTYNLFHYTLPK 131 (436)
T ss_pred ccCCCCchHHHHHHHHHHHhCCC---eEEEEccHHHHHHHHHHHH--------hCCCCEEEEeCCcchHHHHHHHHHhhc
Confidence 44444566789999999999985 5688889999999999876 589999999999998887766655567
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|++++.++- + + .++.+++++ ++++++|++++++||+|.+.|+++|+++||++|+ +++||++++.+
T Consensus 132 ~Gi~v~~vdd--~-~----d~e~l~~ai------~~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi-~liVD~t~a~~ 197 (436)
T PRK07812 132 LGIEVSFVED--P-D----DLDAWRAAV------RPNTKAFFAETISNPQIDVLDIPGVAEVAHEAGV-PLIVDNTIATP 197 (436)
T ss_pred CeEEEEEECC--C-C----CHHHHHHhC------CCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCC-EEEEECCCccc
Confidence 7888888831 1 1 167888888 5789999999999999999999999999999999 89999999877
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEEecCcccc-CCCCCce---eccCCC----C--cc--c-cccccccc
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSS-DMHHPVV---SHEFGN----G--LP--I-ESAWIGTR 298 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~-~l~~~~~---~~~~~~----~--~~--~-~~~~~~~~ 298 (452)
...... .+++|+++.|+||+++ +.| +|.+++....... ......+ +..+.. . .. . +.......
T Consensus 198 ~~~~pl-~~GaDivv~S~tK~lg-g~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (436)
T PRK07812 198 YLIRPL-EHGADIVVHSATKYLG-GHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLR 275 (436)
T ss_pred ccCCch-hcCCCEEEEecccccC-CCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHH
Confidence 654333 4689999999999864 444 5555554332211 0000000 000000 0 00 0 00000000
Q ss_pred CccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc---------------ccccceEEEEcC
Q 012991 299 DYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP---------------EICAAMVMVGLP 362 (452)
Q Consensus 299 ~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~---------------~~~~~~~~~~~~ 362 (452)
......+-..+.-.+..+ +.+....++..+++..+.+.|++.|.++ |..|. ...++++.|.+.
T Consensus 276 ~~G~~l~p~~a~l~~rgl-~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~ 354 (436)
T PRK07812 276 DLGSAISPFNAFLIAQGL-ETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTGAVLSFELA 354 (436)
T ss_pred hcCCCCCHHHHHHHhcCc-CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCceEEEEEec
Confidence 000111112222222211 2456667777899999999999988763 44431 134789999885
Q ss_pred CccccCChhhHHHHHHHHhhhcceEeeecccC-----CCCCCCCCCC--CCCCCCCccceEEecccccCCHHHHHHHHHH
Q 012991 363 SRLRVMGEDDALRLRGHLRVRFGVEVPIHYQA-----PKDDGQPQAG--ARDKDGIITGYARISHQVYNTLEDYEKFRDA 435 (452)
Q Consensus 363 ~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~iRis~~~~~t~~di~~l~~~ 435 (452)
. +...+.++.+.|. -..+.+..+... +....+.... .++..+..++.||+|++. ||++.+++.
T Consensus 355 ~-----~~~~~~~f~~~l~-l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liRlSvGl----Ed~~dli~d 424 (436)
T PRK07812 355 G-----GVEAGKAFVNALT-LHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVRLAVGI----EGIDDILAD 424 (436)
T ss_pred C-----CHHHHHHHHHhCC-cceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHH
Confidence 1 1234567777773 334443221110 0000010100 011225567899999984 566677777
Q ss_pred HHHHHhc
Q 012991 436 VILLVEE 442 (452)
Q Consensus 436 l~~~~~~ 442 (452)
|++.++.
T Consensus 425 l~~Al~~ 431 (436)
T PRK07812 425 LEAGFAA 431 (436)
T ss_pred HHHHHHh
Confidence 7776654
No 229
>PRK07049 methionine gamma-lyase; Validated
Probab=99.90 E-value=7.1e-22 Score=195.89 Aligned_cols=318 Identities=15% Similarity=0.141 Sum_probs=202.1
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|.+........+++.++++.+.+ ++++++||++|+..++.++ +++||+|+++.+.|......+...+..
T Consensus 77 y~R~~~Pt~~~Le~~lA~leg~~---~~iv~~sG~~Ai~~~l~al--------~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~ 145 (427)
T PRK07049 77 YSRFNHPNSEIVEDRLAVYEGAE---SAALFSSGMSAIATTLLAF--------VRPGDVILHSQPLYGGTETLLAKTFRN 145 (427)
T ss_pred ccCCCCcCHHHHHHHHHHHhCCC---cEEEEccHHHHHHHHHHHH--------hCCCCEEEEcCCCcccHHHHHHHHHHh
Confidence 34444566789999999999874 6888899999999999876 589999999999999887666554567
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHH------cCCCEEEEe
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRD------EGVDQVFVD 227 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~------~~~~~~ivD 227 (452)
.|++++.++. . .+ .+++++.+++.. ..+++++|++++|+||||.++|+++|.+++++ +++ ++++|
T Consensus 146 ~Gi~~v~~~~--~-~d----~~~l~~~l~~~~-~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~-~vvvD 216 (427)
T PRK07049 146 FGVGAVGFAD--G-LS----EAAIGAAAEAAA-AKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRP-IIACD 216 (427)
T ss_pred cCcEEEEEeC--C-CC----HHHHHHHHHhhc-cCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCC-EEEEE
Confidence 7988776641 1 12 344555443210 02579999999999999999999999999987 789 79999
Q ss_pred cccccCCccccccccCccEEEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCcccccc
Q 012991 228 AAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLV 305 (452)
Q Consensus 228 ~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (452)
+++..+.....+ ..++|+++.|++|+++|..| +|+++.++++.+. +. .. ...+| +..+. ..
T Consensus 217 ety~~~~~~~pl-~~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~-l~-~~-~~~~g----------~~ls~---~~ 279 (427)
T PRK07049 217 NTLLGPVFQKPL-EHGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQ-VR-AL-RSAIG----------TQLDP---HS 279 (427)
T ss_pred CCccccccCCcc-ccCCCEEEEcCceeecCCCCcEEEEEECCHHHHHH-HH-HH-HHhcC----------CCCCH---HH
Confidence 986543321112 34689999999998765555 6888877766554 11 11 00001 11111 11
Q ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc----------------ccccceEEEEcCCccccC
Q 012991 306 IPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP----------------EICAAMVMVGLPSRLRVM 368 (452)
Q Consensus 306 ~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~ 368 (452)
...+++.++ .+....++..+++..+.+.|++.++++ |..|. ...++++.|.+..
T Consensus 280 a~l~~r~L~----tl~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~----- 350 (427)
T PRK07049 280 CWMLGRSLE----TLVLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKG----- 350 (427)
T ss_pred HHHHHcCCC----hHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcC-----
Confidence 222333333 234445666888999999999987763 43331 0247789998851
Q ss_pred ChhhHHHHHHHHhhhcceEeeecccC-----CCCCCCCCCCC--CCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 369 GEDDALRLRGHLRVRFGVEVPIHYQA-----PKDDGQPQAGA--RDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 369 ~~~~~~~l~~~L~~~~gI~v~~~~~~-----~~~~~~~~~~~--~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
+...+.++.+.|. -+++.+..+... +....+..... ++..+..++.||+|++ .||++.+++.|++.++
T Consensus 351 ~~~~~~~f~~~l~-l~~~~~slG~~~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~svG----lE~~~dl~~dl~~al~ 425 (427)
T PRK07049 351 GQAAAFRFLNALQ-IFKLAVSLGGTESLASHPASMTHSGVPADVRERIGVLESTIRLSIG----IEHPDDLIADLAQALD 425 (427)
T ss_pred CHHHHHHHHHcCc-ccEEcccCCCCCceeeCCCccccccCCHHHHHhcCCCcCeEEEEeC----cCCHHHHHHHHHHHHh
Confidence 1233556777763 244444332111 00000000000 1122456789999998 4667777887777765
Q ss_pred c
Q 012991 442 E 442 (452)
Q Consensus 442 ~ 442 (452)
.
T Consensus 426 ~ 426 (427)
T PRK07049 426 A 426 (427)
T ss_pred c
Confidence 3
No 230
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.90 E-value=5.7e-22 Score=196.81 Aligned_cols=340 Identities=11% Similarity=0.009 Sum_probs=212.9
Q ss_pred CCeEEeccCCC--CCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhC-CC----CCCcEE--EecChh
Q 012991 38 HGVARINNGSF--GSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLIN-AD----DVGEIS--LVDNAT 108 (452)
Q Consensus 38 ~~~~~l~~~~~--~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~----~~~~i~--~t~g~t 108 (452)
++++.|+.|.+ ...|..+.+.+.+.+..... +.....|....+..++|+++++++. .. ++++|+ .|.|++
T Consensus 29 ~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~-~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~ 107 (404)
T PTZ00376 29 PSKVNLGIGAYRDENGKPYVLESVRKAEKIIAE-KNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGT 107 (404)
T ss_pred cccEecccceeECCCCCEehhhHHHHHHHHhcc-ccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcc
Confidence 57889998864 23343456666666543321 2222346667788899999999763 11 356888 488999
Q ss_pred HHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccC
Q 012991 109 TAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKD 187 (452)
Q Consensus 109 ~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~ 187 (452)
.|+.+++.++. ..+++||+|++++|.|+.....+ +..|++++.+++.. +++..+ ++.+++.+++.
T Consensus 108 ~al~~~~~~l~-----~~~~~Gd~Vlv~~P~y~~~~~~~----~~~G~~~~~v~l~~--~~~~~~d~~~l~~~~~~~--- 173 (404)
T PTZ00376 108 GALRLGFEFLK-----RFLPAGTTVYVSNPTWPNHVNIF----KSAGLNVKEYRYYD--PKTKGLDFDGMLEDLRTA--- 173 (404)
T ss_pred hHHHHHHHHHH-----HhcCCCCEEEEcCCCchhHHHHH----HHcCCceeeccccC--cccCCcCHHHHHHHHHhC---
Confidence 99988876431 13589999999999999876554 55699999996521 122334 78888888642
Q ss_pred CCceEEEEEeccCCCCcccccH---HHHHHHHHHcCCCEEEEecccccCCcc---------cccccc-CccEEEEcCccc
Q 012991 188 GKMIRLAIIDHITSMPCVVIPV---RKLVKICRDEGVDQVFVDAAHAMGSIK---------IDVKEI-GADFYVSNLHKW 254 (452)
Q Consensus 188 ~~~~~lv~~~~~~n~tG~~~~l---~~i~~l~~~~~~~~~ivD~a~~~g~~~---------~~~~~~-~~d~~~~s~~K~ 254 (452)
.++++++++++++||||.+++. ++|+++|++|++ ++|+|+++..-... ..+... .--+++.|+||.
T Consensus 174 ~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~-~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~ 252 (404)
T PTZ00376 174 PNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNL-IPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKN 252 (404)
T ss_pred CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCc-EEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCc
Confidence 2456788899999999999985 467888999999 79999997532211 011111 124778899996
Q ss_pred CcCCCC--cEEEE---EecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHH---HHhhcCHHHHHHH
Q 012991 255 FFCPPS--VAFLY---CRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFV---SRFEGGIDGIMQR 326 (452)
Q Consensus 255 l~g~~G--~G~l~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~---~~~~~g~~~~~~~ 326 (452)
++++| +|+++ .+++++.. +....... ....+ +..+...+.++..+++.- ..+..-.+.++++
T Consensus 253 -~~~~GlRvG~~~~~~~~~~~~~~-l~~~~~~~-------~~~~~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 322 (404)
T PTZ00376 253 -MGLYGERIGALHIVCANKEEAAN-VLSQLKLI-------IRPMY-SSPPIHGARIADRILSDPELRAEWLSELKEMSGR 322 (404)
T ss_pred -ccccccccceEEEEeCCHHHHHH-HHHHHHHH-------Hhhhc-CCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 77666 78873 34443322 10000000 00001 122222333333333211 1100014455667
Q ss_pred HHHHHHHHHHHHHHHc---CCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCC
Q 012991 327 NHEQALKMARMLANAW---GTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQA 403 (452)
Q Consensus 327 ~~~~~~~l~~~L~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~ 403 (452)
++++++.+.+.|.+.. ++....+++ +.++|+.++ .++++.|.+++||.+.+
T Consensus 323 ~~~~r~~l~~~L~~~~~~~~~~~~~p~g--g~f~~~~~~-----------~~~~~~L~~~~~v~v~p------------- 376 (404)
T PTZ00376 323 IQNMRQLLYDELKALGSPGDWEHIINQI--GMFSFTGLT-----------KEQVERLIEKYHIYLLD------------- 376 (404)
T ss_pred HHHHHHHHHHHHHhcCCCCcccccccCc--eEEEecCCC-----------HHHHHHHHHhCCEeecC-------------
Confidence 8888999999998862 123333433 666776542 36778887777998731
Q ss_pred CCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 404 GARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 404 ~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
+. |++++. .+.++++.++++|++++.
T Consensus 377 ----------~~-Ris~~~-~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 377 ----------NG-RISVAG-LTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred ----------CC-eEEEec-cCHHhHHHHHHHHHHHHh
Confidence 12 999964 489999999999999875
No 231
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.90 E-value=1.2e-21 Score=194.15 Aligned_cols=333 Identities=13% Similarity=0.105 Sum_probs=207.7
Q ss_pred CCeEEeccCCC---C-CCc--HHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCC-----CCCcE--EEe
Q 012991 38 HGVARINNGSF---G-SCP--KSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINAD-----DVGEI--SLV 104 (452)
Q Consensus 38 ~~~~~l~~~~~---~-~~p--~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-----~~~~i--~~t 104 (452)
++++.|+.|.+ . ..| +.+.+++.+.... + ....|....+..++|+++++++... ++++| ++|
T Consensus 26 ~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~----~-~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT 100 (396)
T PRK09257 26 PDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLET----E-TTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQT 100 (396)
T ss_pred cCcEecceeeEECCCCCEeccHHHHHHHHHhccc----c-cCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEec
Confidence 57889988842 1 233 4566666554321 1 1223555677888899999886311 35666 999
Q ss_pred cChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhc
Q 012991 105 DNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEK 183 (452)
Q Consensus 105 ~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~ 183 (452)
+|+++|+.+++.++. .+++||+|++++|.|+.....+. ..|++++.+++.. .+++.+ ++.+++.+++
T Consensus 101 ~Ga~~al~~~~~~l~------~~~pGd~Vlv~~P~y~~~~~~~~----~~g~~~v~v~~~~--~~~~~~d~~~l~~~~~~ 168 (396)
T PRK09257 101 PGGTGALRVGADFLK------RAFPDAKVWVSDPTWPNHRAIFE----AAGLEVKTYPYYD--AATKGLDFDAMLADLSQ 168 (396)
T ss_pred CCccHHHHHHHHHHH------HhCCCCeEEECCCCcccHHHHHH----HcCCcEEEEeccc--cccCccCHHHHHHHHHh
Confidence 999999999987652 24799999999999998766654 4699999996421 122344 8899988864
Q ss_pred cccCCCceEEEEEeccCCCCcccccH---HHHHHHHHHcCCCEEEEecccccCCcc-----cc---cccc-CccEEEEcC
Q 012991 184 GKKDGKMIRLAIIDHITSMPCVVIPV---RKLVKICRDEGVDQVFVDAAHAMGSIK-----ID---VKEI-GADFYVSNL 251 (452)
Q Consensus 184 ~~~~~~~~~lv~~~~~~n~tG~~~~l---~~i~~l~~~~~~~~~ivD~a~~~g~~~-----~~---~~~~-~~d~~~~s~ 251 (452)
. ..++.++++++++||||.+++. ++|+++|++|++ ++|+|+++..-... .. +... ...+++.|+
T Consensus 169 ~---~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~-~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~Sf 244 (396)
T PRK09257 169 A---PAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGL-IPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSF 244 (396)
T ss_pred C---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCc-EEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEc
Confidence 2 2446778889999999999984 567889999999 79999997642211 00 1111 224778899
Q ss_pred cccCcCCCC--cEEEEE--e-cCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHH---HHhhcCHHHH
Q 012991 252 HKWFFCPPS--VAFLYC--R-KSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFV---SRFEGGIDGI 323 (452)
Q Consensus 252 ~K~l~g~~G--~G~l~~--~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~---~~~~~g~~~~ 323 (452)
+|. ++++| +|++++ . ++.+.. +....... .... ..+++...+.++..+++.- ..+..-++.+
T Consensus 245 SK~-~~~~GlRiG~~~~~~~~~~~~~~-~~~~~~~~-------~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 314 (396)
T PRK09257 245 SKN-FGLYGERVGALSVVAEDAEEADR-VLSQLKAT-------IRTN-YSNPPAHGAAIVATILNDPELRAEWEAELEEM 314 (396)
T ss_pred CCc-CccccccceeEEEEeCCHHHHHH-HHHHHHHH-------hhhh-cCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 996 77766 788774 2 232221 00000000 0000 0122222222222232210 0001135567
Q ss_pred HHHHHHHHHHHHHHHHHHc---CCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCC
Q 012991 324 MQRNHEQALKMARMLANAW---GTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQ 400 (452)
Q Consensus 324 ~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~ 400 (452)
+++++++++.+.+.|.+.. ++.+..|++ +.++|+.++ .. ++..|.++.||.+.+
T Consensus 315 r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~g--g~~~w~~l~----------~~-~~~~l~~~~~V~~~p---------- 371 (396)
T PRK09257 315 RERIKAMRQLLVEALKAKGPSRDFDFIARQR--GMFSYSGLT----------PE-QVDRLREEFGVYAVG---------- 371 (396)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcccccccc--eEEEecCCC----------HH-HHHHHHHcCCEEEcC----------
Confidence 8888889999999998763 244444444 677777653 23 344454557998741
Q ss_pred CCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHH
Q 012991 401 PQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILL 439 (452)
Q Consensus 401 ~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~ 439 (452)
.+ |++++. .+.++|+.+++.|+++
T Consensus 372 ------------~~--ri~~~~-~~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 372 ------------SG--RINVAG-LNESNIDYVAEAIAAV 395 (396)
T ss_pred ------------CC--eEEEee-CCHHHHHHHHHHHHhh
Confidence 12 999964 4788999999999875
No 232
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.90 E-value=6.1e-21 Score=189.55 Aligned_cols=324 Identities=15% Similarity=0.187 Sum_probs=211.5
Q ss_pred CCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhccccc--C
Q 012991 48 FGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTE--G 125 (452)
Q Consensus 48 ~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~--~ 125 (452)
.|...+.+.+++.+.+.... ..+.. ...+...++.+.++++++. +.+++++|||+|+..++..+. .+.+ .
T Consensus 55 ~Gh~~~~i~~a~~~~~~~~~-~~~~~---~~~~~~~~l~~~l~~~~~~---~~~~~~~SGs~A~e~al~~a~-~~~~~~~ 126 (401)
T PRK00854 55 QGHCHPKILAAMVEQAGRLT-LTSRA---FRNDQLAPLYEELAALTGS---HKVLPMNSGAEAVETAIKAVR-KWGYEVK 126 (401)
T ss_pred CCCCCHHHHHHHHHHHhhcc-ccccc---cCCHHHHHHHHHHHhhCCC---CEEEEeCCcHHHHHHHHHHHH-HHHHhcc
Confidence 34557779999998887642 11111 1245678899999999876 489999999999999998763 2210 0
Q ss_pred CCCCC-CEEEEeCCcchhHHHHHHHHHH---------hcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEE
Q 012991 126 RFHRN-DTVLMLHCAFQAVKKSIQAYVT---------RAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAI 195 (452)
Q Consensus 126 ~~~~g-~~Vl~~~~~~~s~~~~~~~~a~---------~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~ 195 (452)
...++ ++|++....|++....+..+.. .....+..+ +..+ ++++++.+ ++++++|+
T Consensus 127 g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~d----~~~le~~i------~~~~~aii 192 (401)
T PRK00854 127 GVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVV----PFGD----AEALEAAI------TPNTVAFL 192 (401)
T ss_pred CCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEe----CCCC----HHHHHHHh------CCCeEEEE
Confidence 11233 6888888777765433322100 001123333 2222 68888888 57899999
Q ss_pred EeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCccc----cccccCccEEEEcCcccCcCCC-CcEEEE
Q 012991 196 IDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIKI----DVKEIGADFYVSNLHKWFFCPP-SVAFLY 265 (452)
Q Consensus 196 ~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~~----~~~~~~~d~~~~s~~K~l~g~~-G~G~l~ 265 (452)
+++++|++|.+.| +++|.++|++||+ ++|+|++++ +|..+. +.....+|+++++ |++.+.. .+|+++
T Consensus 193 ~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi-~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~~~--K~l~gg~~~ig~v~ 269 (401)
T PRK00854 193 VEPIQGEAGVIIPPAGYFTRVRELCTANNV-TLILDEIQTGLGRTGKLLAEEHEGIEADVTLIG--KALSGGFYPVSAVL 269 (401)
T ss_pred EccccCCCCCcCCCHHHHHHHHHHHHHcCC-EEEEechhhCCCCCchHhHHhhcCCCCCEEEec--ccccCCccCeEEEE
Confidence 9999999999997 9999999999999 899999997 544331 1223357888875 9886643 368888
Q ss_pred EecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 012991 266 CRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS 345 (452)
Q Consensus 266 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~ 345 (452)
.++++++. + .... .+ ..+ + .+.....+..++++.+.+ +.+.++.+++.+++.+.|.++ +..
T Consensus 270 ~~~~~~~~-l-~~~~---~~------~t~-~-~~~~~~aa~~a~L~~l~~-----~~~~~~~~~~~~~l~~~L~~~-~~~ 330 (401)
T PRK00854 270 SNSEVLGV-L-KPGQ---HG------STF-G-GNPLACAVARAALKVLTE-----EGMIENAAEMGAYFLEGLRSI-RSN 330 (401)
T ss_pred EcHHHHhc-c-cCCC---CC------CCC-C-cCHHHHHHHHHHHHHHHH-----cCHHHHHHHHHHHHHHHHHhh-ccC
Confidence 88887765 2 1110 00 001 1 122334444455655543 225677888899999999876 332
Q ss_pred cCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCC
Q 012991 346 LGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNT 425 (452)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t 425 (452)
........+.++.+.+.. +..+..++.+.|.++ ||.+.. ...+++|++++..++
T Consensus 331 ~~~~~~g~g~~~~i~~~~-----~~~~~~~~~~~L~~~-GV~v~~--------------------~~~~~lR~~p~~~~t 384 (401)
T PRK00854 331 IVREVRGRGLMLAVELEP-----EAGGARQYCEALKER-GLLAKD--------------------THDHTIRLAPPLVIT 384 (401)
T ss_pred ceEEEeccceEEEEEEec-----CchhHHHHHHHHHHC-CeEEec--------------------CCCCEEEEeCCcccC
Confidence 221112235555554421 123567899999775 999842 123699999998899
Q ss_pred HHHHHHHHHHHHHHHh
Q 012991 426 LEDYEKFRDAVILLVE 441 (452)
Q Consensus 426 ~~di~~l~~~l~~~~~ 441 (452)
++||++++++|++++.
T Consensus 385 ~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 385 REQVDWALEQIAKVLA 400 (401)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998864
No 233
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.90 E-value=1e-21 Score=196.71 Aligned_cols=360 Identities=13% Similarity=0.118 Sum_probs=210.9
Q ss_pred CeEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh-----CC--CC--CCcEEEecChh
Q 012991 39 GVARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI-----NA--DD--VGEISLVDNAT 108 (452)
Q Consensus 39 ~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~-----~~--~~--~~~i~~t~g~t 108 (452)
+++.|..+.++ ..|+.+.+..... .. .. |....+..++++++++.+ +. +. .++|++|+|++
T Consensus 101 ~~i~l~~g~p~~~~~~~v~e~~~~~-~~-----~~---Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~ 171 (527)
T PRK09275 101 DAVSYVRDQLGFDADEFVYELVDGI-IG-----DN---YPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGT 171 (527)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHH-hc-----CC---CCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHH
Confidence 47888888887 4456566644433 21 11 223344555666666522 11 11 24899999999
Q ss_pred HHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccC
Q 012991 109 TAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKD 187 (452)
Q Consensus 109 ~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~ 187 (452)
+|+..++.++... ..+++||+|++++|.|+........ ...+.+++.++. ..++...+ .+++++++
T Consensus 172 ~al~~~~~aL~~~---~ll~pGD~Vlv~~P~y~~Y~~~~~l--~g~~~~~v~v~~--~~~~~f~~d~~~l~~~~------ 238 (527)
T PRK09275 172 AAMCYIFDSLKEN---GLLKAGDKIALMTPIFTPYLEIPEL--PRYDLEVVHINA--DEENEWQYPDSELEKLR------ 238 (527)
T ss_pred HHHHHHHHHHhhh---hcCCCCCEEEEeCCChHHHHHHHHH--cCCCeEEEEeec--CcccCCCCCHHHHHhhc------
Confidence 9999998864211 0268999999999999886554432 122444454532 11222334 78888877
Q ss_pred CCceEEEEEeccCCCCccccc---HHHHHHHHHH--cCCCEEEEecccccCCcc-ccccc-c-CccEEEEcCcccCcCCC
Q 012991 188 GKMIRLAIIDHITSMPCVVIP---VRKLVKICRD--EGVDQVFVDAAHAMGSIK-IDVKE-I-GADFYVSNLHKWFFCPP 259 (452)
Q Consensus 188 ~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~--~~~~~~ivD~a~~~g~~~-~~~~~-~-~~d~~~~s~~K~l~g~~ 259 (452)
++++++|++++|+||||.+++ +++|+++|++ +++ ++|+|++++.-... ..+.. . .-.+++.|+||. +|++
T Consensus 239 ~~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l-~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~-f~mt 316 (527)
T PRK09275 239 DPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDL-MIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKY-FGAT 316 (527)
T ss_pred CCCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCc-EEEECCCChhhcccccCHHHhCCCCEEEEeehhhh-ccCc
Confidence 689999999999999999998 5677888865 489 79999998642211 11111 1 235788899996 8888
Q ss_pred C--cEEEEEecC-----ccccCC--------CCCceec--c-----CCCCcc-----cccccccccCccccccHH--HHH
Q 012991 260 S--VAFLYCRKS-----ILSSDM--------HHPVVSH--E-----FGNGLP-----IESAWIGTRDYSAQLVIP--SAV 310 (452)
Q Consensus 260 G--~G~l~~~~~-----~~~~~l--------~~~~~~~--~-----~~~~~~-----~~~~~~~~~~~~~~~~~~--~al 310 (452)
| +|+++++++ ++.. + ...+.+. + +..... .........+...+.++. ...
T Consensus 317 G~RlG~i~~~~~~v~~~~i~~-l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~ 395 (527)
T PRK09275 317 GWRLGVIALHEDNVFDKLIAK-LPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLF 395 (527)
T ss_pred HhHHhhhhcCchhHHHHHHHh-ccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHH
Confidence 8 799888775 3221 1 0000000 0 000000 011112223333333211 111
Q ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccc--cC--------ChhhHHHHHHHH
Q 012991 311 TFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLR--VM--------GEDDALRLRGHL 380 (452)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--------~~~~~~~l~~~L 380 (452)
..+...+...+.+++.++++++.+.+.| ++.+...+...+.++++.++.... .+ ...+..+++..|
T Consensus 396 all~~~~~~~~~~~~~~~~Rr~~l~~~L----g~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~L 471 (527)
T PRK09275 396 ALLDEEDAYKKAMKDIIRRRYKALYEGL----GLPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRL 471 (527)
T ss_pred HHHhCchHHHHHHHHHHHHHHHHHHHHc----CCCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHH
Confidence 2222101124566667777777776666 444322111226777777753210 00 112567888888
Q ss_pred hhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhcc
Q 012991 381 RVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEEG 443 (452)
Q Consensus 381 ~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~~ 443 (452)
.++.||.+.++..+. ...+++|+|+.. .+++++....++|++++++.
T Consensus 472 l~e~gV~v~PG~~Fg---------------~~~~~vRis~a~-~~~~~~~~~~~rl~~~l~~y 518 (527)
T PRK09275 472 AEETGVVLLPGGGFG---------------GPEWSVRVSLAN-LNEEDYAKIGKAIRKLLDEY 518 (527)
T ss_pred HhcCCEEEeCchhhC---------------CCCCeEEEEEec-CCHHHHHHHHHHHHHHHHHH
Confidence 888899987776652 235689999974 26788888888888887643
No 234
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.90 E-value=1.7e-21 Score=191.51 Aligned_cols=313 Identities=14% Similarity=0.061 Sum_probs=203.4
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|++...+..+++++.+++++|. +++++++||++|+.+++.++ +++||+|+++++.|.+....+...+..
T Consensus 59 Y~r~~~pt~~~Le~~lA~l~g~---~~~l~~~sgt~Ai~~~l~al--------~~~GD~Vl~~~~~y~~~~~~~~~~~~~ 127 (394)
T PRK07050 59 YGLHATPTSLALAQRLAEIEGG---RHALLQPSGLAAISLVYFGL--------VKAGDDVLIPDNAYGPNRDHGEWLARD 127 (394)
T ss_pred cCCCCCHHHHHHHHHHHHHhCC---CeEEEeccHHHHHHHHHHHH--------hCCCCEEEEecCCcccHHHHHHHHHHh
Confidence 5555666789999999999997 48999999999999999987 589999999999999887766666778
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|++++.++. .+ .+++++.+ .+++++|++++|+||+|...++++|+++|+++|+ ++++|++++.|
T Consensus 128 ~Gi~v~~vd~----~~----~~~l~~~i------~~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi-~livD~a~a~~ 192 (394)
T PRK07050 128 FGITVRFYDP----LI----GAGIADLI------QPNTRLIWLEAPGSVTMEVPDVPAITAAARARGV-VTAIDNTYSAG 192 (394)
T ss_pred cCeEEEEECC----CC----HHHHHHhc------CCCCeEEEEECCCCCCccHhhHHHHHHHHHHcCC-EEEEECCcccc
Confidence 8999998842 22 36678877 5789999999999999999999999999999999 79999999887
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEEec-CccccCCCCCceeccCCCCcccccccccccCccccccHHHHH
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRK-SILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAV 310 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 310 (452)
.. ......++|+++.|++|++.|..+ .|.++.++ ++.++ + ... ....|. +.+ + .....++
T Consensus 193 ~~-~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~-~-~~~-~~~~G~----------~~~--~-~~a~l~l 255 (394)
T PRK07050 193 LA-FKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAK-L-KLA-RMRLGI----------GVS--A-DDCSLVL 255 (394)
T ss_pred cc-cCHHHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHH-H-HHH-HHhcCC----------CCC--H-HHHHHHH
Confidence 64 222334789999999999766554 46666644 44333 1 111 000111 111 1 1111222
Q ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc--------------ccccceEEEEcCCccccCChhhHHH
Q 012991 311 TFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP--------------EICAAMVMVGLPSRLRVMGEDDALR 375 (452)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (452)
+-+. .+..-.++..+++..+.+.|++.+.+. ++.|. ...++++.|.+... ....+..+
T Consensus 256 r~l~----tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~---~~~~~~~~ 328 (394)
T PRK07050 256 RGLP----SLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDER---YSPAQVDA 328 (394)
T ss_pred cCCC----cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCC---CCHHHHHH
Confidence 2222 233334556677778889998887653 33221 12367778877510 01245677
Q ss_pred HHHHHhhhcceEeeecccCCCCCCCCCC-CCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 376 LRGHLRVRFGVEVPIHYQAPKDDGQPQA-GARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 376 l~~~L~~~~gI~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
+.+.|.. .++.+..+....---..... .........++.||+|++. ||++.+++.|.+.++
T Consensus 329 ~~~~l~~-~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGl----E~~~dl~~dl~~al~ 390 (394)
T PRK07050 329 FVEALEL-FAIGWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIGL----EDEADLIADLEQALE 390 (394)
T ss_pred HHHcCCC-CeeccccCCccceEeeCcccccchhhcCCCCCEEEEEeCc----CCHHHHHHHHHHHHH
Confidence 8888854 57666443221000000000 0000111345899999985 445555555555543
No 235
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.90 E-value=3.3e-22 Score=184.21 Aligned_cols=330 Identities=16% Similarity=0.159 Sum_probs=212.9
Q ss_pred EeccCCCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcc
Q 012991 42 RINNGSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRG 121 (452)
Q Consensus 42 ~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~ 121 (452)
+|-+.+.....++++++|...-. ...-.|+.++...++++.++++++. +.++|+++||+|+.+++.+.
T Consensus 3 ~f~SDn~~g~~~~m~eam~~a~~------~~~~~YG~D~~~~~~e~~~ae~~g~---~a~~Fv~sGT~aN~lal~~~--- 70 (342)
T COG2008 3 DFRSDNVAGPTPEMREALAAANA------VGDDVYGEDPTTNALEQRIAELFGK---EAALFVPSGTQANQLALAAH--- 70 (342)
T ss_pred ccccCccCCCCHHHHHHHHhccc------cCCCCCCCCHHHHHHHHHHHHHhCC---ceEEEecCccHHHHHHHHHh---
Confidence 44444444344448888876421 1223467788899999999999998 69999999999999999987
Q ss_pred cccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccC
Q 012991 122 FTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHIT 200 (452)
Q Consensus 122 ~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~ 200 (452)
++|+..|++...+|.....+-.. +--.++....+ ....++.+ +++++..++..-.+...+.+++..+..
T Consensus 71 -----~~~~~~vi~~~~aHi~~~E~Ga~-~~~~~~~~~~~----~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~ 140 (342)
T COG2008 71 -----CQPGESVICHETAHIYTDECGAP-EFFGGGQKLPI----VPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTA 140 (342)
T ss_pred -----cCCCCeEEEeccccceecccCcH-HHHcCCceecc----CCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeecc
Confidence 58999999998888765433221 11122222222 23456777 999999887521122334455554455
Q ss_pred CCCcccccHH---HHHHHHHHcCCCEEEEeccc---ccCCcccccc--ccCccEEEEcCcccCcCCCCcEEEEEecCccc
Q 012991 201 SMPCVVIPVR---KLVKICRDEGVDQVFVDAAH---AMGSIKIDVK--EIGADFYVSNLHKWFFCPPSVAFLYCRKSILS 272 (452)
Q Consensus 201 n~tG~~~~l~---~i~~l~~~~~~~~~ivD~a~---~~g~~~~~~~--~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~ 272 (452)
|..|+++|++ +|.++||++|+ ++|+|||- +.-....+.. ..++|+++++++|.++.|.| ++++.+.+++.
T Consensus 141 te~GtVy~l~el~~i~~~~k~~~l-~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~g-Aiv~gn~~~~~ 218 (342)
T COG2008 141 TEGGTVYPLDELEAISAVCKEHGL-PLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPVG-AIVFGNRDFAK 218 (342)
T ss_pred CCCceecCHHHHHHHHHHHHHhCC-ceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcceee-eEEEcCHHHHH
Confidence 5779999965 56788999999 79999973 2211222222 23699999999998555654 78888888887
Q ss_pred cCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCccc
Q 012991 273 SDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEI 352 (452)
Q Consensus 273 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 352 (452)
+ ..+.....|+.+. -..++++. ++-.+.. .-......+..+++++|.+.+...+|+++..|+.
T Consensus 219 ~---a~~~rK~~Ggl~~----------k~r~laA~-~~~~l~~--~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~- 281 (342)
T COG2008 219 R---ARRWRKRAGGLMR----------KARFLAAQ-GLYALED--DVWRLAADHANAMAARLAEGLEAKPGVKLAFPVE- 281 (342)
T ss_pred H---HHHHHHHhcccHh----------hhhHHHHH-HHHHHhc--cHHHHHHHHHHHHHHHHHHhhhhcCCceeccCCc-
Confidence 6 2333333444331 11222222 2333332 1244445556667999999999888999888754
Q ss_pred ccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHH
Q 012991 353 CAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKF 432 (452)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l 432 (452)
.+++.+.+++ ...+.-....++.. .|+++. .....+|+.++.-++++||+++
T Consensus 282 -tN~vf~~l~~-----~~i~~l~~~~~~~~-~~~~~~---------------------~~~~~vRfvts~a~~~edv~~~ 333 (342)
T COG2008 282 -TNMVFVRLPE-----SAIEALRLAGALFY-RGVLIG---------------------AHGEIVRFVTSWATSEEDVDEL 333 (342)
T ss_pred -ccEEEEECCh-----HHHHHHHhhchhhe-eeeecc---------------------CCCceEEEEeeccCCHHHHHHH
Confidence 7899888862 11222222222222 133331 0013799999999999999999
Q ss_pred HHHHHHHH
Q 012991 433 RDAVILLV 440 (452)
Q Consensus 433 ~~~l~~~~ 440 (452)
+..++++.
T Consensus 334 ~~~~~~~~ 341 (342)
T COG2008 334 VAAIKALL 341 (342)
T ss_pred HHHHHHhh
Confidence 99998864
No 236
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.90 E-value=2.3e-21 Score=191.87 Aligned_cols=330 Identities=15% Similarity=0.158 Sum_probs=202.7
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|++...+..+.+++.+++++|++ ..+++++|++|+.+++.++ +++||+|+++..+|.++...+.....+
T Consensus 63 Y~r~~~pt~~~le~~la~l~g~~---~~v~fsSG~~Ai~~al~~l--------l~~Gd~VI~~~~~y~~t~~~~~~~l~~ 131 (437)
T PRK05613 63 YSRLTNPTVEALENRIASLEGGV---HAVAFASGQAAETAAILNL--------AGAGDHIVTSPRLYGGTETLFLVTLNR 131 (437)
T ss_pred eeCccChHHHHHHHHHHHHhCCC---eEEEeCCHHHHHHHHHHHh--------cCCCCEEEECCCccHHHHHHHHHHHHh
Confidence 44555677899999999999984 4455566668888888765 589999999999999987666555677
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|+++++++. + .+ ++++++++ +++|++|+++++.|++|.+.|+++|+++|+++|+ ++|+|++++.|
T Consensus 132 ~Gi~v~~vd~--~-~d----~e~l~~~l------~~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi-~livD~t~a~g 197 (437)
T PRK05613 132 LGIEVTFVEN--P-DD----PESWQAAV------QPNTKAFFGETFANPQADVLDIPAVAEVAHRNQV-PLIVDNTIATA 197 (437)
T ss_pred cCeEEEEECC--C-CC----HHHHHHhC------CccCeEEEEECCCCCCCcccCHHHHHHHHHHcCC-eEEEECCCccc
Confidence 8999999941 1 11 68888888 6789999999999999999999999999999999 89999999887
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEE-ecCcccc------CCCCCceeccC----------CCCc-ccccc
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYC-RKSILSS------DMHHPVVSHEF----------GNGL-PIESA 293 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~-~~~~~~~------~l~~~~~~~~~----------~~~~-~~~~~ 293 (452)
.. .+...+++|++++|+||++ ++.| +|.+++ +++.... .+.+.....+. +... ..+..
T Consensus 198 ~~-~~p~~~GaDivv~S~~K~l-~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (437)
T PRK05613 198 AL-VRPLELGADVVVASLTKFY-TGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKAR 275 (437)
T ss_pred cc-cChHHhCCCEEEeecccee-cCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHH
Confidence 65 3444568999999999975 5443 354444 4332100 00000000000 0000 00000
Q ss_pred cccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc---------------ccccceE
Q 012991 294 WIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP---------------EICAAMV 357 (452)
Q Consensus 294 ~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~---------------~~~~~~~ 357 (452)
...........+-..+.-.++.+ +.+....++..+++..+.+.|++.|.+. |..|. ...++++
T Consensus 276 ~~~~~~~G~~~~p~~a~l~~rgl-~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~~g~gg~~ 354 (437)
T PRK05613 276 AGLLRDTGATLSPFNAWVTAQGL-DTLSLRLERHNENAIKVAEFLNNHEKVAKVNFAGLKDSPWYATKEKLGLKYTGSVL 354 (437)
T ss_pred HHHHHhcCCCCCHHHHHHHHccc-CcHHHHHHHHHHHHHHHHHHHHcCCCcceEECCCCCCCccHHHHHHhcCCCCceEE
Confidence 00000001111112222122211 1345556677889999999999988763 43331 1136789
Q ss_pred EEEcCCccccCChhhHHHHHHHHhhhcceEeeecccC-----CCCCCCCCCCC--CCCCCCccceEEecccccCCHHHHH
Q 012991 358 MVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQA-----PKDDGQPQAGA--RDKDGIITGYARISHQVYNTLEDYE 430 (452)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~-----~~~~~~~~~~~--~~~~~~~~~~iRis~~~~~t~~di~ 430 (452)
.|.+.. +...+..+.+.|. -+.+.+..+... +....+..... +++.+..++.||+|++. ||++
T Consensus 355 sf~l~~-----~~~~~~~f~~~l~-l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGl----E~~~ 424 (437)
T PRK05613 355 SFDIKG-----GKDEAWAFIDALK-LHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGITQATVRLSVGI----EDID 424 (437)
T ss_pred EEEecC-----CHHHHHHHHHhCC-cceEccCCCCCchhhcCCCccCCccCCHHHHHhcCCCCCeEEEEecc----CCHH
Confidence 998851 1234566777763 234433222110 00000000000 11235567899999984 5666
Q ss_pred HHHHHHHHHHh
Q 012991 431 KFRDAVILLVE 441 (452)
Q Consensus 431 ~l~~~l~~~~~ 441 (452)
.+++.|.+.++
T Consensus 425 dLi~Dl~~Al~ 435 (437)
T PRK05613 425 DIIADLEGGFA 435 (437)
T ss_pred HHHHHHHHHHh
Confidence 67777766664
No 237
>PRK05939 hypothetical protein; Provisional
Probab=99.90 E-value=5.8e-21 Score=187.59 Aligned_cols=325 Identities=15% Similarity=0.152 Sum_probs=200.5
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|++...+..+.+++.++++.|.. . .+.+++|++|+..++.++ +++||+|+++++.|+++...+.. ..+
T Consensus 41 Y~r~g~p~~~~lE~~la~leg~~--~-~v~~ssG~~Ai~~~l~al--------l~~Gd~Vv~~~~~y~~t~~~~~~-l~~ 108 (397)
T PRK05939 41 YARQGTPTTAALEAKITKMEGGV--G-TVCFATGMAAIAAVFLTL--------LRAGDHLVSSQFLFGNTNSLFGT-LRG 108 (397)
T ss_pred cCCCCCHHHHHHHHHHHHHhCCC--e-EEEeCCHHHHHHHHHHHH--------cCCCCEEEECCCccccHHHHHHH-HHh
Confidence 44444567889999999999985 3 456666789999998876 58999999999999887666655 467
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|++++.++. .+ .+++++++ .++|++|++++++||+|.+.|+++|+++|+++|+ ++++|++++.+
T Consensus 109 ~G~~v~~v~~----~d----~e~l~~~l------~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi-~livD~t~a~~ 173 (397)
T PRK05939 109 LGVEVTMVDA----TD----VQNVAAAI------RPNTRMVFVETIANPGTQVADLAGIGALCRERGL-LYVVDNTMTSP 173 (397)
T ss_pred cCCEEEEECC----CC----HHHHHHhC------CCCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCC-EEEEECCcccc
Confidence 8999999943 22 68888888 5789999999999999999999999999999999 79999998776
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEEecCcccc----CCCCCceeccCCC-Cc-ccccccccccCcccccc
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSS----DMHHPVVSHEFGN-GL-PIESAWIGTRDYSAQLV 305 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~----~l~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~ 305 (452)
. .++...+++|+++.|++|+++| +| +|.+++.+..... .+...+. .+.. .. ................+
T Consensus 174 ~-~~~~~~~gaDivv~S~sK~~~g-~g~~igg~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~G~~~~ 249 (397)
T PRK05939 174 W-LFRPKDVGASLVINSLSKYIAG-HGNALGGAVTDTGLFDWSAYPNIFPAYR--KGDPQQWGLTQIRKKGLRDMGATLS 249 (397)
T ss_pred c-ccCccccCCEEEEecCeecccC-CCCeEEEEEecCcccccccccchhhhhh--ccchhhHHHHHHHHHHHHhcCCCCC
Confidence 4 3455566899999999998655 44 4554443222111 0000000 0000 00 00000000001111222
Q ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc--------------ccccceEEEEcCCccccCCh
Q 012991 306 IPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP--------------EICAAMVMVGLPSRLRVMGE 370 (452)
Q Consensus 306 ~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~~~~~~ 370 (452)
...+....+.+ +.+..-.++..+++..+.++|++.|.++ |..|. ...++++.|.+. +.
T Consensus 250 p~~a~l~~rgl-~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~------~~ 322 (397)
T PRK05939 250 SEAAHRIAIGA-ETLALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELA------DG 322 (397)
T ss_pred HHHHHHHHcCc-CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeC------CH
Confidence 23332222211 1344445566778889999999887663 43331 135888999885 22
Q ss_pred hhHHHHHHHHhhhcceEeeecccC-----CCCCCCCCCC--CCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 371 DDALRLRGHLRVRFGVEVPIHYQA-----PKDDGQPQAG--ARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 371 ~~~~~l~~~L~~~~gI~v~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
.+..++.+.|. -+......+... +....+.... .++..+..++.+|+|++. ||++.+++.|++.++
T Consensus 323 ~~~~~f~~~l~-l~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svGl----Ed~~dLi~dl~~Al~ 395 (397)
T PRK05939 323 IDCFDFLNRLK-LVIKATHLGDTRTLVIPVAPTIYYEMGAERRASMGIADSLIRVSVGI----EDEADLIADFEQALD 395 (397)
T ss_pred HHHHHHHHhCC-cceEccCCCCCCeeeecCcccccccCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHHh
Confidence 24456666663 122222211110 0000000000 011225567899999984 567777777777664
No 238
>PRK10534 L-threonine aldolase; Provisional
Probab=99.90 E-value=6e-22 Score=191.91 Aligned_cols=310 Identities=14% Similarity=0.157 Sum_probs=193.0
Q ss_pred CcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCC
Q 012991 51 CPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRN 130 (452)
Q Consensus 51 ~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g 130 (452)
+++.+.+++.+.... . ..|.+.....++++++++++|.+ .+++++||++++.+++.++ +.+|
T Consensus 12 p~~~~~~a~~~~~~~-----~--~~Y~~~~~~~~L~~~la~~~g~~---~~~v~~~g~~a~~~~l~~~--------~~~g 73 (333)
T PRK10534 12 PSRAMLEAMMAAPVG-----D--DVYGDDPTVNALQDYAAELSGKE---AALFLPTGTQANLVALLSH--------CERG 73 (333)
T ss_pred CCHHHHHHHHhccCC-----C--cccCCCHHHHHHHHHHHHHhCCC---eEEEeCchHHHHHHHHHHh--------cCCC
Confidence 555688888653321 1 12335567899999999999995 4468888888888777765 5789
Q ss_pred CEEEEeCCcchhHHHHHHHHHHhc-CcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCccccc
Q 012991 131 DTVLMLHCAFQAVKKSIQAYVTRA-GGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIP 208 (452)
Q Consensus 131 ~~Vl~~~~~~~s~~~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~ 208 (452)
|+|+++.+.|...+.... +... +.+++.++. ++++.+ +++|+++++..+....++++|++++++ +|.++|
T Consensus 74 d~vi~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~ 145 (333)
T PRK10534 74 EEYIVGQAAHNYLYEAGG--AAVLGSIQPQPIDA----AADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLP 145 (333)
T ss_pred CeeEEechhhhhHhcCCc--hHHhcCceEEeecC----CCCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecC
Confidence 999998888864332210 1112 356666633 333344 888988884211111268999999765 599998
Q ss_pred HHHH---HHHHHHcCCCEEEEecccccCCc---ccccc--ccCccEEEEcCcccCcCCCCcE-EEEEecCccccCCCCCc
Q 012991 209 VRKL---VKICRDEGVDQVFVDAAHAMGSI---KIDVK--EIGADFYVSNLHKWFFCPPSVA-FLYCRKSILSSDMHHPV 279 (452)
Q Consensus 209 l~~i---~~l~~~~~~~~~ivD~a~~~g~~---~~~~~--~~~~d~~~~s~~K~l~g~~G~G-~l~~~~~~~~~~l~~~~ 279 (452)
.++| .++|+++++ ++++|+++..+.. ..... ....|.++.|+||. +|.+ +| +++.++++++. + ...
T Consensus 146 ~~~l~~i~~~~~~~~~-~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~-~~~~-~G~~~~~~~~~i~~-~-~~~ 220 (333)
T PRK10534 146 REYLKQAWEFTRERNL-ALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKG-LGTP-VGSLLVGNRDYIKR-A-RRW 220 (333)
T ss_pred HHHHHHHHHHHHHcCC-eEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcC-CCCc-ccceEEcCHHHHHH-H-HHH
Confidence 7654 678899999 7999998764321 11111 01246666789996 5554 46 56677777765 2 111
Q ss_pred eeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEE
Q 012991 280 VSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMV 359 (452)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~ 359 (452)
.. .+.+..+... .++.+++..+.. .....++..+.++++.+.|.++ |+++..+ . ++++++
T Consensus 221 ~~-----------~~~~~~~~~~-~~~a~~~~~l~~----~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~-~--~nfv~~ 280 (333)
T PRK10534 221 RK-----------MTGGGMRQAG-ILAAAGLYALKH----NVARLQEDHDNAAWLAEQLREA-GADVMRQ-D--TNMLFV 280 (333)
T ss_pred HH-----------HhCCchhhHH-HHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHhC-CCccCCC-C--ceEEEE
Confidence 00 0001111111 112222222221 1122333455678999999987 7776544 2 778888
Q ss_pred EcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHH
Q 012991 360 GLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILL 439 (452)
Q Consensus 360 ~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~ 439 (452)
.++ ..+..++.+.|.++ ||.++.+ ..+|++.+...|.+++++++++|+++
T Consensus 281 ~~~-------~~~~~~~~~~l~~~-gi~v~~~----------------------~~~rl~~~~r~t~e~~~~~~~~l~~~ 330 (333)
T PRK10534 281 RVG-------EEQAAALGEYMRER-NVLINAS----------------------PIVRLVTHLDVSREQLAEVVAHWRAF 330 (333)
T ss_pred ECC-------chhHHHHHHHHHHc-CeeecCC----------------------ceEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 875 22456788888765 9998521 25788887667999999999999977
Q ss_pred Hh
Q 012991 440 VE 441 (452)
Q Consensus 440 ~~ 441 (452)
+.
T Consensus 331 ~~ 332 (333)
T PRK10534 331 LA 332 (333)
T ss_pred hc
Confidence 64
No 239
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.90 E-value=8.9e-22 Score=191.27 Aligned_cols=305 Identities=13% Similarity=0.129 Sum_probs=196.7
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|++...+..++++++++++.+. +++++++||++|+.+++. + +++||+|+++.+.|.+....+......
T Consensus 48 Y~R~~~p~~~~le~~lA~leg~---~~~v~~~sG~aAi~~~l~-~--------l~~GD~VI~~~~~yg~~~~~~~~~~~~ 115 (364)
T PRK07269 48 YTRTKNPTRAKLEETLAAIESA---DYALATSSGMSAIVLAFS-V--------FPVGSKVVAVRDLYGGSFRWFNQQEKE 115 (364)
T ss_pred eeCCCCccHHHHHHHHHHHhCC---CeEEEeCCHHHHHHHHHH-H--------hCCCCEEEEecCCcCchHHHHHHHHhc
Confidence 4555566789999999999987 589999999999998885 3 489999999999998765444432222
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.+.++.+. .+ ++++++++ +++|++|++++|+||+|.+.|+++|+++|+++|+ ++++|++++.+
T Consensus 116 ~~~~~~~~-----~d-----~~~l~~~i------~~~TklV~lesP~NPtg~~~di~~I~~la~~~gi-~vvvD~t~~~~ 178 (364)
T PRK07269 116 GRFHFTYA-----NT-----EEELIAAI------EEDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGA-KVIVDNTFYSP 178 (364)
T ss_pred CcEEEEec-----CC-----HHHHHHhc------CcCceEEEEECCCCCCCeeeCHHHHHHHHHHcCC-EEEEECCCccc
Confidence 23332222 11 57888888 5789999999999999999999999999999999 79999997765
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEEecC-ccccCCCCCceeccCCCCcccccccccccCccccccHHHHH
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRKS-ILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAV 310 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 310 (452)
..... -..++|++++|++|+++|... .|+++.+++ +.++ +. .. .. ..|.. .+-...+.++
T Consensus 179 ~~~~p-l~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~-~~-~~-~~-----------~~G~~--~s~~~a~l~~ 241 (364)
T PRK07269 179 IYQRP-IELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEK-LF-YN-LN-----------TTGAV--LSPFDSYLLM 241 (364)
T ss_pred ccCCc-hhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHH-HH-HH-HH-----------HhCCC--CCHHHHHHHH
Confidence 43222 245899999999998766443 467676543 3332 11 00 00 00110 0111111222
Q ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCC-CcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEee
Q 012991 311 TFVSRFEGGIDGIMQRNHEQALKMARMLANAWGT-SLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVP 389 (452)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~ 389 (452)
.-++ .++...++..+++..+.++|++.+.+ ++..|.. ++++.|.+. +.....++.+.|.- +.+...
T Consensus 242 ~~L~----tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~--gg~~sf~~~------~~~~~~~f~~~l~~-~~~~~s 308 (364)
T PRK07269 242 RGLK----TLSLRMERSTANAQEVVAFLKKSPAVKEVLYTGK--GGMISFKVA------DETRIPHILNSLKV-FTFAES 308 (364)
T ss_pred cCCC----cHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCc--CcEEEEEEC------CHHHHHHHHHhCCc-ceEccC
Confidence 2222 35666777889999999999988876 4554543 788898874 22334566666632 333332
Q ss_pred ecccC-----CCCCCC--CCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 390 IHYQA-----PKDDGQ--PQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 390 ~~~~~-----~~~~~~--~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
.+... +....+ .....+...+..++.+|+|++ .||++.+++.|++.++
T Consensus 309 lG~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~~liRlsvG----lE~~~dli~dl~~al~ 363 (364)
T PRK07269 309 LGGVESLITYPTTQTHADIPAEVRHSYGLTDDLLRLSIG----IEDARDLIADLKQALE 363 (364)
T ss_pred CCCcCeEeeCCcccccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHhc
Confidence 21110 000000 000011123556789999998 4567777777776653
No 240
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.90 E-value=1.6e-21 Score=193.10 Aligned_cols=328 Identities=16% Similarity=0.132 Sum_probs=203.7
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|++...+..+++++.++++.|.+ ..+++++|++|+.+++.++ +++||+|+++.+.|++....+......
T Consensus 52 y~r~~~pt~~~Le~~lA~l~g~~---~~l~~ssG~~Ai~~al~al--------~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~ 120 (425)
T PRK06084 52 YTRIMNPTNDVLEQRVAALEGGV---GALAVASGMAAITYAIQTI--------AEAGDNIVSVAKLYGGTYNLLAHTLPR 120 (425)
T ss_pred ccCCCCchHHHHHHHHHHHhCCC---ceeEehhHHHHHHHHHHHH--------hCCCCEEEEeCCCcchHHHHHHHhccc
Confidence 55555666789999999999974 5678889999999999887 488999999999998776666543344
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|+++.+++ ..+ ++++++++ .+++++|++++++||+|.+.|+++|.++|+++|+ ++|+|++++.+
T Consensus 121 ~gi~v~~~d----~~d----~e~le~ai------~~~tklV~lesp~NPtG~v~dl~~I~~la~~~~i-~vVvD~a~a~~ 185 (425)
T PRK06084 121 IGIETRFAA----HDD----IAALEALI------DERTKAVFCESIGNPAGNIIDIQALADAAHRHGV-PLIVDNTVATP 185 (425)
T ss_pred ceeEEEEEC----CCC----HHHHHHHh------ccCCcEEEEeCCCCCCCeecCHHHHHHHHHHcCC-EEEEECCCccc
Confidence 577777773 222 68888888 5678999999999999999999999999999999 89999999877
Q ss_pred CccccccccCccEEEEcCcccCcCCCC-cEEEEE-ecCccccCCCCC--cee---cc-CCCCccc------------ccc
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS-VAFLYC-RKSILSSDMHHP--VVS---HE-FGNGLPI------------ESA 293 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G-~G~l~~-~~~~~~~~l~~~--~~~---~~-~~~~~~~------------~~~ 293 (452)
..... ..+++|+++.|++||++|+.. +|.+++ ++.......... .+. .. ++..... ...
T Consensus 186 ~~~~p-~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 264 (425)
T PRK06084 186 VLCRP-FEHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVP 264 (425)
T ss_pred ccCCh-hhcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHH
Confidence 65322 246899999999998665432 344444 332110000000 000 00 0000000 000
Q ss_pred cccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc--------------cc-ccceE
Q 012991 294 WIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP--------------EI-CAAMV 357 (452)
Q Consensus 294 ~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--------------~~-~~~~~ 357 (452)
..+.....+-...+..++-++ .+....++..+++..+.+.|++.+.+. |..|. .. .++++
T Consensus 265 ~~~~g~~l~~~~a~l~lrgl~----tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~~gg~~ 340 (425)
T PRK06084 265 LRNMGAALSPFNAFLILQGLE----TLALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELARRYMGGKPASIL 340 (425)
T ss_pred HHhcCCCCCHHHHHHHHcCcC----cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHHHhCCCCcceEE
Confidence 001111111111111222222 456667778899999999999988763 44431 02 46789
Q ss_pred EEEcCCccccCChhhHHHHHHHHhhhcceEeeecccC-----CCCCCCCCCC--CCCCCCCccceEEecccccCCHHHHH
Q 012991 358 MVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQA-----PKDDGQPQAG--ARDKDGIITGYARISHQVYNTLEDYE 430 (452)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~iRis~~~~~t~~di~ 430 (452)
.|.+.. +.....++.+.|. -+.+.+..+... +....+.... .+++.+..++.+|+|++ .||.+
T Consensus 341 s~~~~~-----~~~~~~~f~~~l~-l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~liR~svG----lEd~~ 410 (425)
T PRK06084 341 SFGIKG-----GQAAGARFIDALK-LVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDMVRLSIG----IEHID 410 (425)
T ss_pred EEEecC-----CHHHHHHHHHhCC-cceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCeEEEEec----cCCHH
Confidence 998851 1223556777773 344444322110 0000000000 01123566789999998 46677
Q ss_pred HHHHHHHHHHhc
Q 012991 431 KFRDAVILLVEE 442 (452)
Q Consensus 431 ~l~~~l~~~~~~ 442 (452)
.|++.|++.++.
T Consensus 411 dLi~dl~~Al~~ 422 (425)
T PRK06084 411 DIIADLAQALDA 422 (425)
T ss_pred HHHHHHHHHHHh
Confidence 777777777654
No 241
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.89 E-value=5.1e-21 Score=189.88 Aligned_cols=168 Identities=15% Similarity=0.161 Sum_probs=138.1
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|++...+..+++++++++++|.+ ..++++||++|+..++.++ +++||+|+++.+.|++....+...+..
T Consensus 51 ysr~~~p~~~~le~~lA~l~g~~---~~v~~~sG~~Ai~~al~~l--------~~~Gd~Vl~~~~~y~~t~~~~~~~~~~ 119 (418)
T TIGR01326 51 YSRLMNPTTDVLEQRIAALEGGV---AALAVASGQAAITYAILNL--------AQAGDNIVSSSYLYGGTYNLFKHTLKR 119 (418)
T ss_pred eECCCChhHHHHHHHHHHHhCCC---eEEEEccHHHHHHHHHHHH--------hCCCCEEEEECCCcHHHHHHHHHHHHH
Confidence 44445566789999999999974 6789999999999999876 488999999999998887777766788
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|++++.++ .++ ++++++++ .+++++|++++++||+|.+.|+++|.++|+++|+ ++|+|++++.+
T Consensus 120 ~G~~v~~v~----~~d----~~~l~~~l------~~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i-~livD~t~~~~ 184 (418)
T TIGR01326 120 LGIEVRFVD----PDD----PEEFEKAI------DENTKAVFAETIGNPAINVPDIEAIAEVAHAHGV-PLIVDNTFATP 184 (418)
T ss_pred cCcEEEEEC----CCC----HHHHHHhc------CcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCC-EEEEECCCchh
Confidence 899999984 222 68888888 5689999999999999999999999999999999 79999999876
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEEecC
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRKS 269 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~ 269 (452)
..... ...++|+++.|++|++ +++| +|+++++++
T Consensus 185 ~~~~~-l~~g~Divv~S~sK~l-~g~G~~lGg~v~~~~ 220 (418)
T TIGR01326 185 YLCRP-IDHGADIVVHSATKYI-GGHGTAIGGVIVDGG 220 (418)
T ss_pred hcCCc-hhcCCeEEEECccccc-cCCccceEEEEEecc
Confidence 43222 2457999999999985 5555 677777553
No 242
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.89 E-value=2.2e-21 Score=188.76 Aligned_cols=312 Identities=12% Similarity=0.080 Sum_probs=200.1
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|++...+..+.+++.++.+.+.+ ..+++++|++|+..++.++ +++||+|+++++.|++....+..++++
T Consensus 58 YsR~gnPt~~~Le~~la~le~~~---~~v~~sSG~aAi~~~l~al--------l~~GD~Vlv~~~~Y~~~~~l~~~~l~~ 126 (395)
T PRK05967 58 YGTRGTPTTDALCKAIDALEGSA---GTILVPSGLAAVTVPFLGF--------LSPGDHALIVDSVYYPTRHFCDTMLKR 126 (395)
T ss_pred cCCCCChHHHHHHHHHHHHhCCC---CEEEECcHHHHHHHHHHHh--------cCCCCEEEEccCCcHHHHHHHHHHHHh
Confidence 44555677888999999988763 3466666899999999877 699999999999999987766566788
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|+++..++. ++ .+.+++++ .++|++|++++|+||++.+.|+++|+++|+++|+ ++++|++++.+
T Consensus 127 ~Gi~v~~vd~----~~----~e~l~~al------~~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~-~vvVD~t~a~p 191 (395)
T PRK05967 127 LGVEVEYYDP----EI----GAGIAKLM------RPNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGA-IVMMDNTWATP 191 (395)
T ss_pred cCeEEEEeCC----CC----HHHHHHhc------CcCceEEEEECCCCCCCcHHHHHHHHHHHHHhCC-EEEEECCccCc
Confidence 8999999842 22 36788888 5789999999999999999999999999999999 89999998865
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHH
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVT 311 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 311 (452)
.. .....+|+|+++.|.+|++.|-.. .|++..+++..++ + ... .. ..|.. .+-..+..
T Consensus 192 ~~-~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~-l-~~~-~~-----------~~G~~-----~~p~da~l 251 (395)
T PRK05967 192 LY-FRPLDFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQ-L-LEA-HG-----------TLGLC-----AGPDDTYQ 251 (395)
T ss_pred ee-cChhHcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHH-H-HHH-HH-----------HcCCC-----CCHHHHHH
Confidence 32 233346899999999998544222 5666555543332 1 000 00 01211 11112222
Q ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc--------------ccccceEEEEcCCccccCChhhHHHH
Q 012991 312 FVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP--------------EICAAMVMVGLPSRLRVMGEDDALRL 376 (452)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~l 376 (452)
.++.+ +.+.--.++..+++..+.+.|++.|.++ |..|. ...++++.|.++.... .+...+.++
T Consensus 252 ~~rgl-~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~-~~~~~~~~f 329 (395)
T PRK05967 252 ILRGL-RTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPE-KGKAKAHAF 329 (395)
T ss_pred HHcCc-ccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCc-ccHHHHHHH
Confidence 22210 1234445667788888999999988763 44442 1247889998851000 002345567
Q ss_pred HHHHhhhcceEeeecccCCCCCCCCC-CCC---CCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 377 RGHLRVRFGVEVPIHYQAPKDDGQPQ-AGA---RDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 377 ~~~L~~~~gI~v~~~~~~~~~~~~~~-~~~---~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
.+.|. -+.+.+..+....- -+. ... ....+..++.+|+|++. ||.+.+++.|.+.++
T Consensus 330 ~~~l~-l~~~~~slG~~~sL---i~~~~~~~~~~~~~~~~~~liRlSvGl----Ed~~dLi~Dl~~Al~ 390 (395)
T PRK05967 330 LDALE-IFGLGYSWGGYESL---ALHVKLGDRTVAKAPYAGPVIRLQIGL----EDVPDLKADLERGFA 390 (395)
T ss_pred HHhCC-cceEccCCCCccee---eeeCCCChhHhhhccCCCCeEEEEecc----CCHHHHHHHHHHHHH
Confidence 77763 23444432211100 000 000 00113345799999985 455556666665554
No 243
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.89 E-value=2.5e-21 Score=193.64 Aligned_cols=366 Identities=13% Similarity=0.099 Sum_probs=211.4
Q ss_pred CeEEeccCCCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHH-HHHHhHhCC--CCCC--cEEEecChhHHHHH
Q 012991 39 GVARINNGSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESR-AAVKDLINA--DDVG--EISLVDNATTAAAI 113 (452)
Q Consensus 39 ~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~la~~~~~--~~~~--~i~~t~g~t~a~~~ 113 (452)
+++.|..+.++..|+..++++.+..... .++. +....+..+++. +.+.+.++. ..++ +|++|+|+++|+..
T Consensus 95 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~-~Y~~---p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~ 170 (521)
T TIGR03801 95 DIISYVIDQLGFDPDAFLYEMCDGIIGD-NYPV---PDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCY 170 (521)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHhhcC-CCCC---CCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHH
Confidence 4678888887755655666655543211 1111 112222233322 233333332 2233 89999999999999
Q ss_pred HHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCCh----HHH-HHHHHHHHhccccCC
Q 012991 114 VLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASE----EEI-INEFKKGIEKGKKDG 188 (452)
Q Consensus 114 ~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~----~~~-~~~l~~~i~~~~~~~ 188 (452)
++.++... ..+.+||+|+++.|.|+........ ...|.+++.++.+. .+.+ ..+ .+++++++ +
T Consensus 171 ~~~~l~~~---~ll~pGD~Vlv~~P~y~~y~~~~~l--~~~g~~vv~i~~~~-~~~~g~~~~~~d~~~l~~~~------~ 238 (521)
T TIGR03801 171 IFDSLKAN---ELLKKGDKIALMTPIFTPYLEIPEL--PRYDFEVVRIKADE-MTEDGTHTWQYPDKELEKLR------D 238 (521)
T ss_pred HHHHHhHh---hcCCCCCEEEEeCCCcHHHHHHHHH--hcCCcEEEEeeccc-ccccccccCCCCHHHHHHhc------C
Confidence 88863211 0268999999999999886554432 22467777775421 1111 334 78888776 6
Q ss_pred CceEEEEEeccCCCCccccc---HHHHHHHHHHc--CCCEEEEecccccCCcc-cccccc--CccEEEEcCcccCcCCCC
Q 012991 189 KMIRLAIIDHITSMPCVVIP---VRKLVKICRDE--GVDQVFVDAAHAMGSIK-IDVKEI--GADFYVSNLHKWFFCPPS 260 (452)
Q Consensus 189 ~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~--~~~~~ivD~a~~~g~~~-~~~~~~--~~d~~~~s~~K~l~g~~G 260 (452)
+++++|++++|+||||.+++ +++|+++|++| ++ ++|+|++++.-... .++... .-.+++.|+||. +|.+|
T Consensus 239 ~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l-~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~-fg~~G 316 (521)
T TIGR03801 239 PSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDL-MILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSKY-FGATG 316 (521)
T ss_pred CCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCe-EEEECCCchhhcccccchhhhCCCCEEEEEcchhh-ccCch
Confidence 78999999999999999998 55678889987 89 79999998632211 111111 234788899996 78777
Q ss_pred --cEEEEEecC-----cccc-------CCCCCceecc-------CCCCcc-----cccccccccCccccc--cHHHHHHH
Q 012991 261 --VAFLYCRKS-----ILSS-------DMHHPVVSHE-------FGNGLP-----IESAWIGTRDYSAQL--VIPSAVTF 312 (452)
Q Consensus 261 --~G~l~~~~~-----~~~~-------~l~~~~~~~~-------~~~~~~-----~~~~~~~~~~~~~~~--~~~~al~~ 312 (452)
+|+++.+++ ++.. .+...+.+.. |..+.. .........+...+. ++.++...
T Consensus 317 ~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~al 396 (521)
T TIGR03801 317 WRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFAL 396 (521)
T ss_pred hhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHH
Confidence 899888754 2211 0000000000 000000 000011112222222 22122233
Q ss_pred HHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccc--cC--------ChhhHHHHHHHHhh
Q 012991 313 VSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLR--VM--------GEDDALRLRGHLRV 382 (452)
Q Consensus 313 ~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--------~~~~~~~l~~~L~~ 382 (452)
+.......+.+++.++++++.+.+.| |+.+...+...+.++++.++.... .+ ...+..+++..|.+
T Consensus 397 l~~~~~y~~~~~~~~~~R~~~l~~~L----g~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~ 472 (521)
T TIGR03801 397 MDKENAYKAETKDICRRREKLLFRGL----GLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAE 472 (521)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHhc----CCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHH
Confidence 32111135556666777777777666 554322122226778887763210 00 01246788888888
Q ss_pred hcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 383 RFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 383 ~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
+.||.+.++..+. ...+++|+|+.. .+++++++..+.|++++++
T Consensus 473 e~gV~v~PG~~Fg---------------~~~~~vRisla~-l~~~~~~~~~~rl~~~~~~ 516 (521)
T TIGR03801 473 ETGIVLLPGGGFG---------------GPEWSVRVSLAN-LNEYDYAEIGRAIRKILDE 516 (521)
T ss_pred hCCEEEeCchhcC---------------CCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Confidence 8899997776652 224679999974 3688899999999998865
No 244
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.89 E-value=6.3e-21 Score=188.67 Aligned_cols=211 Identities=14% Similarity=0.197 Sum_probs=154.4
Q ss_pred CCCeEEeccCCCCCCcHHHHHHHHHHHHHHhcCCchhhh-hhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHH
Q 012991 37 QHGVARINNGSFGSCPKSVLADQQKWQLKFLQQPDDFYF-NSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVL 115 (452)
Q Consensus 37 ~~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~ 115 (452)
..+.+|+++.+.++.|+++.+++.+++..+. +...... ......++.+++.+++++|++ + .++++++++|+.+++
T Consensus 79 atg~v~~tNlg~s~l~~~vieAv~~~~~~y~-~l~~~l~~g~~g~r~~~le~~lA~l~gae--~-alvv~sg~aAi~l~l 154 (454)
T TIGR00474 79 ATGVVLHTNLGRAPLAEEAIEAVTDAARGYS-NLEYDLETGKRGSRYSHVEGLLCELTGAE--D-ALVVNNNAAAVLLAL 154 (454)
T ss_pred CCCcEEeccCCCCCCCHHHHHHHHHHHhccc-chhccccccccchHHHHHHHHHHHHhCCC--c-EEEECCHHHHHHHHH
Confidence 3466777777788999999999999887542 2111110 111234688999999999995 3 456788888998888
Q ss_pred HHhhcccccCCCCCCCEEEEeCCcchhHH--HHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEE
Q 012991 116 QQIGRGFTEGRFHRNDTVLMLHCAFQAVK--KSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRL 193 (452)
Q Consensus 116 ~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~--~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~l 193 (452)
.++ .+|++|++++.+|..+. ..+.......|+++++++. ++. ..++++++++ +++|++
T Consensus 155 ~~l---------~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~----~~~-~~l~dle~aI------~~~T~l 214 (454)
T TIGR00474 155 NTL---------AKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGT----TNR-THLKDYEDAI------TENTAL 214 (454)
T ss_pred HHh---------CCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCC----CCC-CCHHHHHHhc------CcCCEE
Confidence 643 78999999988764221 1122235678999999943 211 1178899999 688999
Q ss_pred EEEeccCCCC--c--ccccHHHHHHHHHHcCCCEEEEecccc---------cCCccc--cccccCccEEEEcCcccCcCC
Q 012991 194 AIIDHITSMP--C--VVIPVRKLVKICRDEGVDQVFVDAAHA---------MGSIKI--DVKEIGADFYVSNLHKWFFCP 258 (452)
Q Consensus 194 v~~~~~~n~t--G--~~~~l~~i~~l~~~~~~~~~ivD~a~~---------~g~~~~--~~~~~~~d~~~~s~~K~l~g~ 258 (452)
|+++|++|++ | .+.|+++|+++||++|+ ++++|.+.+ .+..+. +...+++|++++|++||++||
T Consensus 215 v~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~-~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp 293 (454)
T TIGR00474 215 LLKVHTSNYRIVGFTEEVSIAELVALGREHGL-PVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGP 293 (454)
T ss_pred EEEEccCcccccCCCCCCCHHHHHHHHHHcCC-eEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCC
Confidence 9999999974 6 47899999999999999 899997532 122222 444578999999999998788
Q ss_pred CCcEEEEEecCcccc
Q 012991 259 PSVAFLYCRKSILSS 273 (452)
Q Consensus 259 ~G~G~l~~~~~~~~~ 273 (452)
. .|+++++++.++.
T Consensus 294 ~-~G~i~g~~~~i~~ 307 (454)
T TIGR00474 294 Q-AGIIVGKKELIER 307 (454)
T ss_pred e-EEEEEECHHHHHh
Confidence 6 5999999887764
No 245
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.89 E-value=9.1e-21 Score=180.35 Aligned_cols=341 Identities=15% Similarity=0.099 Sum_probs=223.2
Q ss_pred HHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCE
Q 012991 53 KSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDT 132 (452)
Q Consensus 53 ~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~ 132 (452)
....+++.+.+..-.-.. -+..+++++.+++++|++ ..+.++|||.|+++++.++. +.+||+
T Consensus 15 ~~e~~~v~~vl~sg~i~~--------G~~v~~FE~~~ae~~G~k---~ava~~sgT~AL~laL~al~-------ig~GDe 76 (374)
T COG0399 15 EEELAAVQEVLKSGWLTG--------GPFVRRFEQAFAEYLGVK---YAVAVSSGTAALHLALLALA-------IGPGDE 76 (374)
T ss_pred hHHHHHHHHHHHcCCeec--------ChHHHHHHHHHHHHhCCC---eEEEecChHHHHHHHHHhcC-------CCCCCE
Confidence 445566666654321111 234788999999999995 78899999999999999883 699999
Q ss_pred EEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHH
Q 012991 133 VLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRK 211 (452)
Q Consensus 133 Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~ 211 (452)
||++..+|.+...++.+ .|.++++++++ . +...+ ++.+|++| +++||+|+..|.. |...++++
T Consensus 77 VI~ps~TfvATan~i~~----~Ga~PVFvDid--~-~T~nid~~~ie~aI------t~~tKAIipVhl~---G~~~dm~~ 140 (374)
T COG0399 77 VIVPSFTFVATANAVLL----VGAKPVFVDID--P-DTLNIDPDLIEAAI------TPRTKAIIPVHLA---GQPCDMDA 140 (374)
T ss_pred EEecCCchHHHHHHHHH----cCCeEEEEecC--C-cccCCCHHHHHHHc------ccCCeEEEEehhc---cCCCCHHH
Confidence 99999999998888765 49999999763 1 22445 99999999 7889999999875 99999999
Q ss_pred HHHHHHHcCCCEEEEecccccCCcccccccc-CccEEEEc--CcccCcCCCCcEEEEEecCccccCCCCCceeccCCCCc
Q 012991 212 LVKICRDEGVDQVFVDAAHAMGSIKIDVKEI-GADFYVSN--LHKWFFCPPSVAFLYCRKSILSSDMHHPVVSHEFGNGL 288 (452)
Q Consensus 212 i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~-~~d~~~~s--~~K~l~g~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~ 288 (452)
|.++|++||+ +||.|+||+.|...-+-..- -.|+.++| ..|.+....| |.++.+++.+.. ....+.. .|...
T Consensus 141 i~~la~~~~l-~vIEDaAqa~Ga~y~gk~vGt~Gd~~~fSF~~~K~ittgEG-Gav~tnd~ela~-k~~~lr~--hG~~~ 215 (374)
T COG0399 141 IMALAKRHGL-PVIEDAAQAHGATYKGKKVGSFGDIGAFSFHATKNLTTGEG-GAVVTNDEELAE-KARSLRN--HGLSR 215 (374)
T ss_pred HHHHHHHcCC-eEEEEcchhccCeecCcccccccceEEEEecCCCCccccCc-eEEEeCCHHHHH-HHHHHHH--hCcCC
Confidence 9999999999 79999999999875432211 13555555 5598766665 888887655543 1111111 11110
Q ss_pred ----ccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCccc---ccceEEEEc
Q 012991 289 ----PIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEI---CAAMVMVGL 361 (452)
Q Consensus 289 ----~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~---~~~~~~~~~ 361 (452)
-......|...-..-+.++..+..+. .++++.++-++..+.+.+.|.+++++.+...+.. ...+..+.+
T Consensus 216 ~~~~~y~~~~~G~N~rm~~iqAAigl~QL~----~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~ 291 (374)
T COG0399 216 DAVFKYLHEELGYNYRLTEIQAAIGLAQLE----RLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILV 291 (374)
T ss_pred CccccceeeecccccCHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEe
Confidence 01111223222222222223344444 3567777778888999999988866655444322 233344444
Q ss_pred CCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCC-CCCC------CCCCCCCCccceEEecccccCCHHHHHHHHH
Q 012991 362 PSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDG-QPQA------GARDKDGIITGYARISHQVYNTLEDYEKFRD 434 (452)
Q Consensus 362 ~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~-~~~~------~~~~~~~~~~~~iRis~~~~~t~~di~~l~~ 434 (452)
+. .+.+.+.+.+.|+++ ||.....+.+.+... +... .+-.+.......+.+.++...+.+|++++++
T Consensus 292 ~~-----~~~~R~~l~~~L~~~-gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~ 365 (374)
T COG0399 292 DE-----EGISRDALMESLKEA-GVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIE 365 (374)
T ss_pred cC-----CCCCHHHHHHHHHhC-CCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHH
Confidence 42 135678899999775 777422222222110 0000 0000011234568888888889999999999
Q ss_pred HHHHHHhc
Q 012991 435 AVILLVEE 442 (452)
Q Consensus 435 ~l~~~~~~ 442 (452)
+|++++..
T Consensus 366 ~l~~~~~~ 373 (374)
T COG0399 366 ALKEVLGS 373 (374)
T ss_pred HHHHHhcc
Confidence 99998753
No 246
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.89 E-value=4.1e-21 Score=188.85 Aligned_cols=323 Identities=14% Similarity=0.136 Sum_probs=207.7
Q ss_pred hHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEE
Q 012991 79 RKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSV 158 (452)
Q Consensus 79 ~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v 158 (452)
.+..+.+++.++++.|.. ..+.++||++|+.+++.++ +++||+||++.+.|.+....+.....+.|+++
T Consensus 60 nPtv~~lE~~la~leg~~---~av~~~SG~aAi~~al~al--------l~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v 128 (432)
T PRK06702 60 NPTLAAFEQKLAELEGGV---GAVATASGQAAIMLAVLNI--------CSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDV 128 (432)
T ss_pred CcHHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHh--------cCCCCEEEECCCchHHHHHHHHHHHHHCCCEE
Confidence 456889999999999984 5788999999999999876 58999999999999988777665457789999
Q ss_pred EEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCcccc
Q 012991 159 VEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKID 238 (452)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~ 238 (452)
.+++. ..+ +++++++| +++|++|++++++||++.+.|+++|+++|+++|+ ++++|++.+.+.. ..
T Consensus 129 ~~vd~----~~d---~~~l~~~I------~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi-~livD~T~~tP~~-~~ 193 (432)
T PRK06702 129 TFFNP----NLT---ADEIVALA------NDKTKLVYAESLGNPAMNVLNFKEFSDAAKELEV-PFIVDNTLATPYL-CQ 193 (432)
T ss_pred EEECC----CCC---HHHHHHhC------CcCCeEEEEEcCCCccccccCHHHHHHHHHHcCC-EEEEECCCCchhh-CC
Confidence 99943 111 68899999 6889999999999999999999999999999999 8999998864432 22
Q ss_pred ccccCccEEEEcCcccCcCCCC-c-EEEEEecCcccc-----CCCCC---c----eeccCCCCc----cc--cccccccc
Q 012991 239 VKEIGADFYVSNLHKWFFCPPS-V-AFLYCRKSILSS-----DMHHP---V----VSHEFGNGL----PI--ESAWIGTR 298 (452)
Q Consensus 239 ~~~~~~d~~~~s~~K~l~g~~G-~-G~l~~~~~~~~~-----~l~~~---~----~~~~~~~~~----~~--~~~~~~~~ 298 (452)
.-..++|+++.|.+||++|..+ + |+++.+..+--. .+..+ + ....++... .. .....|.
T Consensus 194 pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~- 272 (432)
T PRK06702 194 AFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGN- 272 (432)
T ss_pred hhhcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccC-
Confidence 3355899999999999776544 3 444333321100 00000 0 000000000 00 0000121
Q ss_pred CccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc---------------ccccceEEEEcC
Q 012991 299 DYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP---------------EICAAMVMVGLP 362 (452)
Q Consensus 299 ~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~---------------~~~~~~~~~~~~ 362 (452)
..+-.....+++-++ .++...++..+++..+.+.|++.+.+. +..|. ...++++.|.++
T Consensus 273 -~~sp~~a~l~~rgL~----Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg~~sf~l~ 347 (432)
T PRK06702 273 -CMSPFNAYISNIGLE----TLHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIK 347 (432)
T ss_pred -CCCHHHHHHHHhccC----cHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEec
Confidence 111111122222222 456667777899999999999988764 43331 124689999885
Q ss_pred CccccCChhhHHHHHHHHhhhcceEeeeccc-CC----CCCCCCCCCC--CCCCCCccceEEecccccCCHHHHHHHHHH
Q 012991 363 SRLRVMGEDDALRLRGHLRVRFGVEVPIHYQ-AP----KDDGQPQAGA--RDKDGIITGYARISHQVYNTLEDYEKFRDA 435 (452)
Q Consensus 363 ~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~-~~----~~~~~~~~~~--~~~~~~~~~~iRis~~~~~t~~di~~l~~~ 435 (452)
. +...+.++.+.|. -+.+.+..+.. .. .+..+..... ++..+..++.+|+|++ .||+|.+++.
T Consensus 348 ~-----~~~~~~~f~~~l~-l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvG----lEd~eDLi~D 417 (432)
T PRK06702 348 G-----GLEAAKEFIANVK-LATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVG----IEDVSDIIAD 417 (432)
T ss_pred C-----CHHHHHHHHHhCc-cceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHH
Confidence 1 1234556777763 34544433211 10 0000101000 1112556789999998 5678888888
Q ss_pred HHHHHhcc
Q 012991 436 VILLVEEG 443 (452)
Q Consensus 436 l~~~~~~~ 443 (452)
|++.++.+
T Consensus 418 l~~Al~~~ 425 (432)
T PRK06702 418 LEAALVGG 425 (432)
T ss_pred HHHHHhcC
Confidence 88888765
No 247
>PRK04311 selenocysteine synthase; Provisional
Probab=99.89 E-value=2.3e-20 Score=185.21 Aligned_cols=211 Identities=14% Similarity=0.172 Sum_probs=154.3
Q ss_pred CCCeEEeccCCCCCCcHHHHHHHHHHHHHHhcCCchhhh-hhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHH
Q 012991 37 QHGVARINNGSFGSCPKSVLADQQKWQLKFLQQPDDFYF-NSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVL 115 (452)
Q Consensus 37 ~~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~ 115 (452)
..+.+|+++.+.++.|+++.+++.+++.... +...... ....+.++.+++.+++++|++ ..++++++++|+.+++
T Consensus 84 atg~v~~tNlg~s~l~~~v~eav~~~~~~~~-~le~~l~~g~~g~r~~~~e~~lA~l~Gae---~a~vv~sgtaAl~l~l 159 (464)
T PRK04311 84 ATGVVLHTNLGRALLSEAAIEAVTEAARGYS-NLEYDLATGKRGSRDRALAALLCALTGAE---DALVVNNNAAAVLLAL 159 (464)
T ss_pred CCccEEeccCCCCCCCHHHHHHHHHHHhccc-ccccchhhcccchHHHHHHHHHHHHhCCC---eEEEECCHHHHHHHHH
Confidence 4567777777778999999999998875432 1111110 011234678999999999995 5678888999999888
Q ss_pred HHhhcccccCCCCCCCEEEEeCCcchhHH--HHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEE
Q 012991 116 QQIGRGFTEGRFHRNDTVLMLHCAFQAVK--KSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRL 193 (452)
Q Consensus 116 ~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~--~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~l 193 (452)
.++ .+|++|++++.+|.++. ..+.......|+++++++.. +. ..+++++++| +++|++
T Consensus 160 ~~l---------~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~----~~-t~~~dle~aI------~~~Tkl 219 (464)
T PRK04311 160 NAL---------AAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTT----NR-THLRDYEQAI------NENTAL 219 (464)
T ss_pred HHh---------CCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCC----CC-CCHHHHHHhc------CccCeE
Confidence 754 78999999988776321 22323346789999999532 11 1178899999 678999
Q ss_pred EEEeccCCC--Cc--ccccHHHHHHHHHHcCCCEEEEeccccc---------CCccc--cccccCccEEEEcCcccCcCC
Q 012991 194 AIIDHITSM--PC--VVIPVRKLVKICRDEGVDQVFVDAAHAM---------GSIKI--DVKEIGADFYVSNLHKWFFCP 258 (452)
Q Consensus 194 v~~~~~~n~--tG--~~~~l~~i~~l~~~~~~~~~ivD~a~~~---------g~~~~--~~~~~~~d~~~~s~~K~l~g~ 258 (452)
|+++|++|+ +| ...|+++|+++||+||+ ++++|++++. +..+. +...+++|++++|++||++||
T Consensus 220 V~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi-~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp 298 (464)
T PRK04311 220 LLKVHTSNYRIEGFTKEVSLAELAALGKEHGL-PVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGP 298 (464)
T ss_pred EEEEcCCCccccccCCcCCHHHHHHHHHHcCC-eEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCC
Confidence 999999997 45 56899999999999999 8999985321 11121 222368999999999998777
Q ss_pred CCcEEEEEecCcccc
Q 012991 259 PSVAFLYCRKSILSS 273 (452)
Q Consensus 259 ~G~G~l~~~~~~~~~ 273 (452)
. .|+++++++++++
T Consensus 299 ~-~G~i~g~~~li~~ 312 (464)
T PRK04311 299 Q-AGIIVGKKELIAR 312 (464)
T ss_pred c-eEEEEEcHHHHHH
Confidence 6 6999999888875
No 248
>PRK07505 hypothetical protein; Provisional
Probab=99.89 E-value=4.7e-20 Score=183.06 Aligned_cols=341 Identities=11% Similarity=0.126 Sum_probs=200.2
Q ss_pred CCCCeEEecc-CCCC-CCcHHHHHHHHHHHHHHh-cCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHH
Q 012991 36 HQHGVARINN-GSFG-SCPKSVLADQQKWQLKFL-QQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAA 112 (452)
Q Consensus 36 ~~~~~~~l~~-~~~~-~~p~~v~e~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~ 112 (452)
.++.++.+.. +..+ ..++.|.+++.+.+..+. ..+.........+..+++++.|+++++. ..+++++|++|+.
T Consensus 44 ~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~----~~~~~~sG~~a~~ 119 (402)
T PRK07505 44 DGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA----SVLTFTSCSAAHL 119 (402)
T ss_pred CCceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC----CEEEECChHHHHH
Confidence 3444555532 2334 567889999999887653 1222211122466789999999999976 3455556677888
Q ss_pred HHHHHhhcccccCCCCCC-CEEEEeC-CcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCc
Q 012991 113 IVLQQIGRGFTEGRFHRN-DTVLMLH-CAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKM 190 (452)
Q Consensus 113 ~~~~~l~~~~~~~~~~~g-~~Vl~~~-~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~ 190 (452)
.++..+.... ..++ ..|++.+ ..|.++.. ...+ ...+.+++.++ ..+ ++++++.++ ++
T Consensus 120 ~ai~~~~~~~----~~~~~~~vi~~~~~~H~s~~~-~~~~-~~~~~~v~~~~----~~d----~~~l~~~~~------~~ 179 (402)
T PRK07505 120 GILPLLASGH----LTGGVPPHMVFDKNAHASLNI-LKGI-CADETEVETID----HND----LDALEDICK------TN 179 (402)
T ss_pred HHHHHHHhcc----cCCCCCCEEEEchhhhHhHHh-hhhh-hhcCCeEEEeC----CCC----HHHHHHHHh------cC
Confidence 7776543211 1222 2355554 45555422 1111 22356777773 333 678888873 45
Q ss_pred eEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCc-----cc--c-cc--ccCccEEEEcCcccCcCCCC
Q 012991 191 IRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSI-----KI--D-VK--EIGADFYVSNLHKWFFCPPS 260 (452)
Q Consensus 191 ~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~-----~~--~-~~--~~~~d~~~~s~~K~l~g~~G 260 (452)
++++++++++||+|.+.|+++|.++|+++++ ++|+|++|+.+.. .. + +. ..+..+++.|++|. +|+.|
T Consensus 180 ~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~-~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~-~~~~G 257 (402)
T PRK07505 180 KTVAYVADGVYSMGGIAPVKELLRLQEKYGL-FLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKA-FGASG 257 (402)
T ss_pred CCEEEEEecccccCCcCCHHHHHHHHHHcCC-EEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhh-hhccC
Confidence 6788888999999999999999999999999 8999999865211 11 1 11 11234677799997 55555
Q ss_pred cEEEEE-ecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHH
Q 012991 261 VAFLYC-RKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLA 339 (452)
Q Consensus 261 ~G~l~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~ 339 (452)
|+++. ++++++. + .... ....+.++++.....+..++++.+.+ +.+....++++++...+...+.
T Consensus 258 -g~~~~~~~~~~~~-~-~~~~---------~~~t~~~~~~~~a~aa~~a~l~~~~~--~~~~~~~~~l~~~~~~~~~~~~ 323 (402)
T PRK07505 258 -GVIMLGDAEQIEL-I-LRYA---------GPLAFSQSLNVAALGAILASAEIHLS--EELDQLQQKLQNNIALFDSLIP 323 (402)
T ss_pred -eEEEeCCHHHHHH-H-HHhC---------CCceeCCCCCHHHHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHHHHHH
Confidence 67655 4455543 1 1110 01112234444455555555554442 1444444444444433222211
Q ss_pred HHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEec
Q 012991 340 NAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARIS 419 (452)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis 419 (452)
. ........+.++.++ +..++.++.+.|.++ ||.++....+.. ...+++||++
T Consensus 324 ~-------~~~g~~~~i~~~~~~------~~~~~~~~~~~l~~~-Gi~v~~~~~p~~-------------~~~~~~lRi~ 376 (402)
T PRK07505 324 T-------EQSGSFLPIRLIYIG------DEDTAIKAAKQLLDR-GFYTSPVFFPVV-------------AKGRAGLRIM 376 (402)
T ss_pred h-------cCCCCCCCEEEEEeC------CHHHHHHHHHHHHHC-CCeEeeecCCCC-------------CCCCceEEEe
Confidence 1 111111223333332 223467889999765 999976532211 1123689999
Q ss_pred ccccCCHHHHHHHHHHHHHHHhcc
Q 012991 420 HQVYNTLEDYEKFRDAVILLVEEG 443 (452)
Q Consensus 420 ~~~~~t~~di~~l~~~l~~~~~~~ 443 (452)
++..+|++|+++++++|++++.++
T Consensus 377 ~~~~~t~eei~~~~~~l~~~l~~~ 400 (402)
T PRK07505 377 FRASHTNDEIKRLCSLLKEILDEG 400 (402)
T ss_pred cCccCCHHHHHHHHHHHHHHHHhh
Confidence 999899999999999999998765
No 249
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.88 E-value=5.3e-21 Score=177.14 Aligned_cols=358 Identities=17% Similarity=0.137 Sum_probs=244.7
Q ss_pred HHHHhhhccCCCCeEEeccCCCCCCcHHHHHHHHHHHHHHhcC--Cch-hhh--hhhhHHHHHHHHHHHhHhCCCCCCcE
Q 012991 27 AEIRDEFSHHQHGVARINNGSFGSCPKSVLADQQKWQLKFLQQ--PDD-FYF--NSLRKGILESRAAVKDLINADDVGEI 101 (452)
Q Consensus 27 ~~ir~~~~~~~~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~--~~~-~~~--~~~~~~~~~~~~~la~~~~~~~~~~i 101 (452)
+.|.++...+ +..|.|= ++-...++.|++++-..+..-+.. |+. +|+ ..-++....+.++..++||++ ..=
T Consensus 16 ~~i~~e~~rq-~~~ieLI-ASEN~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~--~an 91 (413)
T COG0112 16 EAIQQELERQ-REHIELI-ASENFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAE--YAN 91 (413)
T ss_pred HHHHHHHHHH-hhceeee-eccccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCC--ccc
Confidence 4455555433 4455553 456678888999998877664332 333 233 234566777899999999996 333
Q ss_pred EEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCC-ChHHH-HHHHHH
Q 012991 102 SLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLA-SEEEI-INEFKK 179 (452)
Q Consensus 102 ~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~-~~~~~-~~~l~~ 179 (452)
+-..||+.|+..++.++ ++|||+|+-.+..|.++...... ....|.-+..++. +.+ +.+.+ +|++++
T Consensus 92 VQPhSGs~AN~av~~Al--------l~pGDtimgm~l~~GGHltHg~~-v~~sG~~~~~v~Y--~vd~et~~IDyD~~~k 160 (413)
T COG0112 92 VQPHSGSQANQAVYLAL--------LQPGDTIMGLDLSHGGHLTHGSP-VNFSGKLFNVVSY--GVDPETGLIDYDEVEK 160 (413)
T ss_pred cCCCCchHHHHHHHHHH--------cCCCCeEecccCCCCCcccCCCC-CCccceeEEeEec--ccccccCccCHHHHHH
Confidence 55667888999999988 69999999766555443221111 1223555555555 455 33556 999999
Q ss_pred HHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCc-----cccccccCccEEEEcCccc
Q 012991 180 GIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSI-----KIDVKEIGADFYVSNLHKW 254 (452)
Q Consensus 180 ~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~-----~~~~~~~~~d~~~~s~~K~ 254 (452)
.++ ..+|++|++- .+..-..+|++++.++|++.|+ ++++|.||-.|.+ +-++. .+|+++.|.||+
T Consensus 161 ~a~-----e~kPK~ii~G--~SaY~r~id~~~~reIad~VGA-~L~~DmAHiaGLVA~G~~p~P~~--~AdvVTtTTHKT 230 (413)
T COG0112 161 LAK-----EVKPKLIIAG--GSAYSRPIDFKRFREIADEVGA-YLMVDMAHVAGLIAGGVHPNPLP--HADVVTTTTHKT 230 (413)
T ss_pred HHH-----HhCCCEEEEC--ccccccccCHHHHHHHHHHhCc-eEEehHHHHHHHHhcccCCCCCC--ccceEeCCcccC
Confidence 987 4799999984 4455668899999999999999 8999999966543 32332 389999999999
Q ss_pred CcCCCCcEEEEEec-CccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Q 012991 255 FFCPPSVAFLYCRK-SILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALK 333 (452)
Q Consensus 255 l~g~~G~G~l~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~ 333 (452)
|.||+| |++++++ ++..+ +....+ .+- .|.|....+++...++..+.+. +++.+.+++.++++.
T Consensus 231 lrGPrG-G~Il~~~eel~kk-in~aVF----Pg~-------qggpl~HviAakaVa~~Eal~p--~fk~Ya~qVv~NAka 295 (413)
T COG0112 231 LRGPRG-GIILTNDEELAKK-INSAVF----PGL-------QGGPLMHVIAAKAVAFKEALEP--EFKEYAKQVVKNAKA 295 (413)
T ss_pred CCCCCc-eEEEeccHHHHHH-hhhhcC----Ccc-------CCChHHHHHHHHHHHHHHHcCh--hHHHHHHHHHHHHHH
Confidence 999998 9999987 44443 322222 111 1455555666666666666655 889999999999999
Q ss_pred HHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCcc
Q 012991 334 MARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIIT 413 (452)
Q Consensus 334 l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (452)
|.+.|.+. |+++.+.. ...+.+.+.+.. .+.+.++....|. +.||.+..-..+...- ....+
T Consensus 296 LAe~l~~~-G~~vvsGg-TdnHl~lVDl~~-----~~~~Gk~ae~~L~-~~~It~NKN~iP~D~~----------~p~~t 357 (413)
T COG0112 296 LAEALKER-GFKVVSGG-TDNHLVLVDLRS-----KGLTGKKAEAALE-RAGITVNKNAIPFDPE----------SPFVT 357 (413)
T ss_pred HHHHHHHc-CCeEecCC-ccceEEEEEccc-----CCCCHHHHHHHHH-HcCEeeccCCCCCCCC----------CCCCC
Confidence 99999986 88877642 236677776641 2456777777774 5699985433221110 02456
Q ss_pred ceEEecccccCC----HHHHHHHHHHHHHHHhc
Q 012991 414 GYARISHQVYNT----LEDYEKFRDAVILLVEE 442 (452)
Q Consensus 414 ~~iRis~~~~~t----~~di~~l~~~l~~~~~~ 442 (452)
..|||+....+| ++|++.+.+.|.+++..
T Consensus 358 SGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 358 SGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred ccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 789999876654 67899999999888865
No 250
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.88 E-value=2.3e-20 Score=184.84 Aligned_cols=320 Identities=13% Similarity=0.144 Sum_probs=206.6
Q ss_pred CCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccC--
Q 012991 48 FGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEG-- 125 (452)
Q Consensus 48 ~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~-- 125 (452)
.|...+.|.+++.+.+..... .+. ....+...++.++++++.+. +.++++++||+|+..++... +.+...
T Consensus 54 lGh~~p~v~~ai~~~~~~~~~-~~~---~~~~~~~~~l~~~l~~~~~~---~~~~~~~SGseA~e~Alk~a-~~~~~~~~ 125 (396)
T PRK04073 54 QGHRHPKIIQALKDQADKVTL-TSR---AFHSDQLGPWYEKVAKLTGK---DMVLPMNTGAEAVETAIKAA-RRWAYDVK 125 (396)
T ss_pred CCCCCHHHHHHHHHHHhhccc-ccc---ccCCHHHHHHHHHHHhcCCC---CeEEEcCChHHHHHHHHHHH-HHHhhhcc
Confidence 456777899999988765421 111 11234567788889988764 58999999999999998854 333100
Q ss_pred CC-CCCCEEEEeCCcchhHHHHHHHHHHhcCc---------EEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEE
Q 012991 126 RF-HRNDTVLMLHCAFQAVKKSIQAYVTRAGG---------SVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAI 195 (452)
Q Consensus 126 ~~-~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~---------~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~ 195 (452)
.. ..+++|+..+..|++.......+....+. .+..+ +..+ ++.+++.+ .+++++|+
T Consensus 126 g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~d----~~~l~~~i------~~~~~~vi 191 (396)
T PRK04073 126 GVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKI----PYGD----LEALKAAI------TPNTAAFL 191 (396)
T ss_pred CCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEe----CCCC----HHHHHHhc------ccCeEEEE
Confidence 01 22368888888777654333221111000 11222 2221 57788877 46789999
Q ss_pred EeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCc----cccccccCccEEEEcCcccCcCC-CCcEEEE
Q 012991 196 IDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSI----KIDVKEIGADFYVSNLHKWFFCP-PSVAFLY 265 (452)
Q Consensus 196 ~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~----~~~~~~~~~d~~~~s~~K~l~g~-~G~G~l~ 265 (452)
++.++|++|.+.| +++|.++|++||+ ++|+|++++ +|.. ..+.....+|++++ +|.++++ ..+|+++
T Consensus 192 iep~~~~~G~~~~~~~~l~~l~~l~~~~g~-lli~DEv~~g~g~~g~~~~~~~~~~~pdi~~~--sK~lg~gg~~ig~~~ 268 (396)
T PRK04073 192 VEPIQGEAGINIPPEGFLKAARELCKEENV-LFIADEIQTGLGRTGKLFACDWDNVTPDMYIL--GKALGGGVFPISCVA 268 (396)
T ss_pred EcCccCCCCCccCCHHHHHHHHHHHHHcCC-EEEEecchhCCCcCcHHHHhhhcCCCCCEEEe--cccccCCCCcceEEE
Confidence 9999999999987 7899999999999 899999987 3321 12333445788775 5975543 2278999
Q ss_pred EecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 012991 266 CRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS 345 (452)
Q Consensus 266 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~ 345 (452)
+++++.+. + .... ....+ ..+...+.+..++++.+.+ +.+.++.+++++++.+.|.++ +..
T Consensus 269 ~~~~i~~~-~-~~~~---------~~~t~--~~~~~~~aaa~aaL~~~~~-----~~l~~~~~~~~~~l~~~L~~l-~~~ 329 (396)
T PRK04073 269 ANRDILGV-F-TPGS---------HGSTF--GGNPLACAVSIAALEVLEE-----EKLPERSLELGEYFKEQLKEI-DNP 329 (396)
T ss_pred EcHHHHhh-h-cCCC---------CCCCC--CCCHHHHHHHHHHHHHHHh-----cCHHHHHHHHHHHHHHHHHhh-cCC
Confidence 98887765 2 1110 00011 1222334444455665543 235677788899999999876 322
Q ss_pred cCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCC
Q 012991 346 LGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNT 425 (452)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t 425 (452)
........+.++.+.++ .++.++.+.|.++ ||.+.. ..++++|++++..+|
T Consensus 330 ~i~~~~~~g~~~~~~~~--------~~~~~~~~~l~~~-Gv~~~~--------------------~~~~~iRi~p~l~~t 380 (396)
T PRK04073 330 MIKEVRGRGLFIGVELN--------EPARPYCEALKEE-GLLCKE--------------------THETVIRFAPPLVIT 380 (396)
T ss_pred cccceecceEEEEEEec--------chHHHHHHHHHHC-CeEEec--------------------CCCCEEEEECCcccC
Confidence 22222223667777664 1456788888764 999842 113689999998899
Q ss_pred HHHHHHHHHHHHHHH
Q 012991 426 LEDYEKFRDAVILLV 440 (452)
Q Consensus 426 ~~di~~l~~~l~~~~ 440 (452)
++||++++++|++++
T Consensus 381 ~e~i~~~~~~l~~~l 395 (396)
T PRK04073 381 KEELDWAFEKIKAVL 395 (396)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999875
No 251
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.88 E-value=4.3e-20 Score=182.28 Aligned_cols=331 Identities=13% Similarity=0.134 Sum_probs=211.5
Q ss_pred CCCCeEEecc----CCCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHH
Q 012991 36 HQHGVARINN----GSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAA 111 (452)
Q Consensus 36 ~~~~~~~l~~----~~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~ 111 (452)
.+..++.|.. ...|+.++.+.+++.+.+..... .... ...+...+++++++++++. +++++++||++|+
T Consensus 25 ~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~~---~~~~~~~~l~~~la~~~g~---~~~~~~~sg~~a~ 97 (379)
T TIGR00707 25 NGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVH-VSNL---YYTEPQEELAEKLVEHSGA---DRVFFCNSGAEAN 97 (379)
T ss_pred CCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccc-cccc---cCCHHHHHHHHHHHhhCCC---CEEEEeCCcHHHH
Confidence 3555666654 24566667799999887765321 1111 1356688999999999987 3999999999999
Q ss_pred HHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEE----EeCCC-----CCCChHHHHHHHHHHHh
Q 012991 112 AIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVE----VQLPF-----PLASEEEIINEFKKGIE 182 (452)
Q Consensus 112 ~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~----~~~~~-----~~~~~~~~~~~l~~~i~ 182 (452)
..++.++. .+....-.++++|+++++.|++........ +..... .++.. +.+ .++.+++.+
T Consensus 98 ~~a~~~~~-~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~----d~~~l~~~~- 167 (379)
T TIGR00707 98 EAALKLAR-KYTGDKGKEKKKIIAFENSFHGRTMGALSA----TGQPKYQKGFEPLVPGFSYAPYN----DIESLKKAI- 167 (379)
T ss_pred HHHHHHHH-HHhhccCCCCCeEEEECCCcCCccHHHHHh----cCChhhhccCCCCCCCceeeCCC----CHHHHHHHh-
Confidence 99988652 110000013799999999987644333221 211110 11100 111 167888888
Q ss_pred ccccCCCceEEEEEeccCCCCccc-cc---HHHHHHHHHHcCCCEEEEecccc-cCCc----cccccccCccEEEEcCcc
Q 012991 183 KGKKDGKMIRLAIIDHITSMPCVV-IP---VRKLVKICRDEGVDQVFVDAAHA-MGSI----KIDVKEIGADFYVSNLHK 253 (452)
Q Consensus 183 ~~~~~~~~~~lv~~~~~~n~tG~~-~~---l~~i~~l~~~~~~~~~ivD~a~~-~g~~----~~~~~~~~~d~~~~s~~K 253 (452)
.+++++|++++.++++|.. .+ +++|.++|+++++ ++|+|++++ ++.. ..+.....+|+++ ++|
T Consensus 168 -----~~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~-~~i~De~~~~~~~~g~~~~~~~~~~~~d~~t--~sK 239 (379)
T TIGR00707 168 -----DDETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDA-LLIFDEVQTGIGRTGKFFAYEHYGIEPDIIT--LAK 239 (379)
T ss_pred -----hhCeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCC-EEEEeccccCCCccchhhhHHhcCCCCCEEE--Ecc
Confidence 4578999998888888865 33 7899999999999 799999986 3321 1122233467664 579
Q ss_pred cCcCCCCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Q 012991 254 WFFCPPSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALK 333 (452)
Q Consensus 254 ~l~g~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~ 333 (452)
++.++..+|+++.++++++. + .... .+ . ....+...+.+..++++.+.. ..+.+++++++++
T Consensus 240 ~~~~G~riG~~~~~~~~~~~-~-~~~~---~~------~--~~~~~~~~~~aa~aaL~~~~~-----~~~~~~~~~~~~~ 301 (379)
T TIGR00707 240 GLGGGVPIGATLAKEEVAEA-F-TPGD---HG------S--TFGGNPLACAAALAVLEVIEK-----ERLLENVKEKGDY 301 (379)
T ss_pred cccCCcccEEEEEcHHHHhh-h-cCCC---CC------C--CCCCCHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHH
Confidence 86644458999998877765 2 1110 00 0 012233445555556665542 2456778888888
Q ss_pred HHHHHHHHcCCCcC-CCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCc
Q 012991 334 MARMLANAWGTSLG-SPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGII 412 (452)
Q Consensus 334 l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~ 412 (452)
+++.|.++ +.... .+....+.++++.++. +..++.+.|.++ ||.+.+. .
T Consensus 302 ~~~~l~~~-~~~~~~~~~~~~g~~~~~~~~~--------~~~~~~~~l~~~-Gv~v~~~--------------------~ 351 (379)
T TIGR00707 302 FKERLEEL-GKNYPNKEVRGKGLMLGIELEA--------PCKDIVKKALEK-GLLVNCA--------------------G 351 (379)
T ss_pred HHHHHHHH-HhhCCCCccccCceEEEEEecC--------cHHHHHHHHHHC-CcEEeeC--------------------C
Confidence 88888775 22211 1111236678887751 356888888764 9998631 1
Q ss_pred cceEEecccccCCHHHHHHHHHHHHHH
Q 012991 413 TGYARISHQVYNTLEDYEKFRDAVILL 439 (452)
Q Consensus 413 ~~~iRis~~~~~t~~di~~l~~~l~~~ 439 (452)
.+++|++++..+|.+++++++++|+++
T Consensus 352 ~~~lRi~~~~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 352 PKVLRFLPPLIITKEEIDEAVSALEEA 378 (379)
T ss_pred CCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 368999998888999999999999875
No 252
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.88 E-value=3e-20 Score=181.71 Aligned_cols=337 Identities=15% Similarity=0.092 Sum_probs=206.1
Q ss_pred cHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCC
Q 012991 52 PKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRND 131 (452)
Q Consensus 52 p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~ 131 (452)
..+..+++.+.+..- .. .+..+..+++++.++++++. +++++|+|||+|+.+++.++ .+++||
T Consensus 10 ~~~e~~a~~~~~~~~-----~~--~~~g~~~~~~e~~la~~~g~---~~~v~~~sgt~aL~~~l~al-------~~~pGd 72 (376)
T TIGR02379 10 TGQELEYIAEAISEG-----KL--SGDGPFSRRCETWLENRTGT---KKALLTPSCTAALEMAALLL-------DIQPGD 72 (376)
T ss_pred CHHHHHHHHHHHHcC-----Cc--cCCcHHHHHHHHHHHHHhCC---CeEEEeCCHHHHHHHHHHHc-------CCCCcC
Confidence 445667777655321 11 11234578899999999987 47999999999999998876 368999
Q ss_pred EEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHH
Q 012991 132 TVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVR 210 (452)
Q Consensus 132 ~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~ 210 (452)
+|++++++|.+...++. ..|++++.++++. +...+ ++++++.+ ++++++|+.+ +++|...|++
T Consensus 73 ~Viv~~~t~~~~~~~~~----~~G~~~v~vd~d~---~~~~~d~~~le~~i------~~~tk~Iip~---~~~G~~~d~~ 136 (376)
T TIGR02379 73 EVIMPSYTFVSTANAFV----LRGAKIVFVDIRP---DTMNIDETLIESAI------THRTKAIVPV---HYAGVACDMD 136 (376)
T ss_pred EEEECCCCcHHHHHHHH----HcCCEEEEEecCC---CcCCCCHHHHHHhc------CcCceEEEEe---CCCCCccCHH
Confidence 99999999999877764 3599999996531 11234 78899988 5789998754 5689999999
Q ss_pred HHHHHHHHcCCCEEEEecccccCCccccccccC--ccEEEEcCc--ccCc-CCCCcEEEEEe-cCccccCCCCCceeccC
Q 012991 211 KLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIG--ADFYVSNLH--KWFF-CPPSVAFLYCR-KSILSSDMHHPVVSHEF 284 (452)
Q Consensus 211 ~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~--~d~~~~s~~--K~l~-g~~G~G~l~~~-~~~~~~~l~~~~~~~~~ 284 (452)
+|.++|++||+ ++|+|++|+.|.. .+-...+ .|+.++|+| |.+. |+.| |+++.+ +++.++ + ..+.. +
T Consensus 137 ~I~~la~~~~i-~vIeDaa~~~g~~-~~~~~~g~~~~~~~fSf~~~K~l~~g~~g-G~v~~~~~~~~~~-~-~~~~~--~ 209 (376)
T TIGR02379 137 TIMALANKHQL-FVIEDAAQGVMST-YKGRALGSIGHLGTFSFHETKNYTSGGEG-GALLINDQAFIER-A-EIIRE--K 209 (376)
T ss_pred HHHHHHHHCCC-EEEEECccccCCc-cCCcccCCCCCEEEEeCCCCCcCcccCCc-eEEEECCHHHHHH-H-HHHHH--h
Confidence 99999999999 7999999998864 2222222 377777765 4443 3355 777776 445544 1 11111 1
Q ss_pred CCCc---------ccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHc--C-CCcCC-Ccc
Q 012991 285 GNGL---------PIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAW--G-TSLGS-PPE 351 (452)
Q Consensus 285 ~~~~---------~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~--~-~~~~~-~~~ 351 (452)
|... .......|...-..-+....++..+. -++.+.++.++..++..+.|..++ + ..+.. ++.
T Consensus 210 g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~----~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~ 285 (376)
T TIGR02379 210 GTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQLE----QADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNG 285 (376)
T ss_pred CCCCccccccCCCcceeeeecccCCccHHHHHHHHHHHH----HhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCC
Confidence 1100 00000012111111111222223333 245556666677777777776543 1 22221 111
Q ss_pred --cccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCC---CCC----CCccceEEecccc
Q 012991 352 --ICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGAR---DKD----GIITGYARISHQV 422 (452)
Q Consensus 352 --~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~---~~~----~~~~~~iRis~~~ 422 (452)
....++++.++ ...+.+++.+.|.++ ||..+.++.+.+.-. +.+... ... ......+.+.++.
T Consensus 286 ~~~~~~~~~i~~~------~~~~r~~l~~~L~~~-gI~~~~~~~p~~~~~-~~~~~~~~~~~~p~~~~~~~~~l~LP~~~ 357 (376)
T TIGR02379 286 CQHNAHMFYIKLK------DEDDRNELIKYLKEQ-EIMAVFHYVPLHSSP-AGRYFGRFHGEDIYTTKESERLVRLPLYY 357 (376)
T ss_pred CeeeeEEEEEEEC------CcCCHHHHHHHHHHC-CCCccccCcCCCcch-hHHhhCCCCCCChHHHHHHhceEEccCCC
Confidence 11234455554 233678899999764 999865554322100 000000 000 0124468888888
Q ss_pred cCCHHHHHHHHHHHHHHH
Q 012991 423 YNTLEDYEKFRDAVILLV 440 (452)
Q Consensus 423 ~~t~~di~~l~~~l~~~~ 440 (452)
..|++|+++++++|++++
T Consensus 358 ~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 358 GLSKEDQARVIQTICDYL 375 (376)
T ss_pred CCCHHHHHHHHHHHHHHh
Confidence 889999999999999864
No 253
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=99.88 E-value=1.6e-20 Score=167.15 Aligned_cols=371 Identities=17% Similarity=0.191 Sum_probs=270.2
Q ss_pred HHHHHhhhcc---------------CCCCeEEeccCCCCCCcHHHHHHHHHHHHHHhcCCch-hh-h-hhhhHHHHHHHH
Q 012991 26 EAEIRDEFSH---------------HQHGVARINNGSFGSCPKSVLADQQKWQLKFLQQPDD-FY-F-NSLRKGILESRA 87 (452)
Q Consensus 26 ~~~ir~~~~~---------------~~~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~-~~-~-~~~~~~~~~~~~ 87 (452)
..++|++|.+ ..+++|||..++.|.+|+.+.+.+.+-++.|..-... ++ + ..+-..-+.+-.
T Consensus 39 l~~~Rd~F~iPk~~~lp~~d~sLv~~d~~~iYlcGNSLGLmPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~ 118 (465)
T KOG3846|consen 39 LESLRDEFNIPKFKSLPDADPSLVSDDKPVIYLCGNSLGLMPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILP 118 (465)
T ss_pred HHHHHHHhcCCccccCCCCCccccCCCCCeEEEeccccccCchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhh
Confidence 4678888742 2567999999999999999999999988877332111 11 1 223334566778
Q ss_pred HHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCC---CCEEEEeCCcchhHHHHHHHHHHhcCcEEE--EEe
Q 012991 88 AVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHR---NDTVLMLHCAFQAVKKSIQAYVTRAGGSVV--EVQ 162 (452)
Q Consensus 88 ~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~---g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~--~~~ 162 (452)
.++.+.|+. ..+|.+.++-|.-++.++..+ .+| +-+|+...-+|+|-+.++...++..|..+. .+.
T Consensus 119 l~~~iVGA~-e~EvavmNsLTvNlh~Ll~sF--------yKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~ 189 (465)
T KOG3846|consen 119 LLAPIVGAQ-ENEVAVMNSLTVNLHSLLISF--------YKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQ 189 (465)
T ss_pred hhhhhccCC-chhhhhHhhhhhHHHHHHHHh--------cCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEE
Confidence 899999997 678999999999888888876 344 348999999999999999888888887643 222
Q ss_pred CCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccc
Q 012991 163 LPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKE 241 (452)
Q Consensus 163 ~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~ 241 (452)
+. |...+..+ .+++...|++. +..+++|+++..+.-||..+++.+|...-+..|+ ++=.|-||++|.+++.+..
T Consensus 190 ie-PREGEetlRteDILd~IEkn---gDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc-~VGfDLAHAvgNVpL~LHd 264 (465)
T KOG3846|consen 190 IE-PREGEETLRTEDILDTIEKN---GDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGC-LVGFDLAHAVGNVPLQLHD 264 (465)
T ss_pred ec-ccccccchhHHHHHHHHHhc---CCeEEEEEeecceeecccccchhhhhhcccCCCc-EechhhhhhhcCCceEEee
Confidence 22 33333444 67777777653 5678999999999999999999999977777899 8999999999999999999
Q ss_pred cCccEEEEcCcccCcCCCC-cEEEEEecCccccCCCCCceeccCCCCccc--------------ccccccccCccccccH
Q 012991 242 IGADFYVSNLHKWFFCPPS-VAFLYCRKSILSSDMHHPVVSHEFGNGLPI--------------ESAWIGTRDYSAQLVI 306 (452)
Q Consensus 242 ~~~d~~~~s~~K~l~g~~G-~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~ 306 (452)
|++||.+...+|+++++.| +|.+++....... . .|.+..|+|..... --+..+.|++....++
T Consensus 265 WgVDFACWCSYKYlnaGaGgIgGlFvHekh~~~-~-~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al 342 (465)
T KOG3846|consen 265 WGVDFACWCSYKYLNAGAGGIGGLFVHEKHTKE-S-LPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVAL 342 (465)
T ss_pred cCCceEEEeeecccccCCCccceeeeehhhhcc-h-hhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHH
Confidence 9999999999999876544 7777776555543 2 33333334432210 0123456778888888
Q ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-----------cCCCc--ccccceEEEEcCCccccCChhhH
Q 012991 307 PSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-----------LGSPP--EICAAMVMVGLPSRLRVMGEDDA 373 (452)
Q Consensus 307 ~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-----------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 373 (452)
...++.+... .+++++.+..-+..|+.-.+....|.. +..|. +.++..+.+.+. ...
T Consensus 343 ~~SLe~F~q~--~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fs--------sp~ 412 (465)
T KOG3846|consen 343 RSSLELFAQF--NINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFS--------SPT 412 (465)
T ss_pred HhhHHHHHHh--hHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeC--------CCc
Confidence 8899988876 689999999999999888777665533 12221 122333333221 123
Q ss_pred HHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecc-cccCCHHHHHHHHHHHHHHHhcc
Q 012991 374 LRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISH-QVYNTLEDYEKFRDAVILLVEEG 443 (452)
Q Consensus 374 ~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~-~~~~t~~di~~l~~~l~~~~~~~ 443 (452)
..+...|.+ +|+.+. -..++.||+.+ +.|||.-||-+++.+|.+++...
T Consensus 413 ~~vfqeL~k-rGv~~D--------------------kR~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~ 462 (465)
T KOG3846|consen 413 PKVFQELHK-RGVIGD--------------------KRRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKL 462 (465)
T ss_pred hHHHHHHHH-cCeecc--------------------ccCCCceEeecchhhccHHHHHHHHHHHHHHHHHh
Confidence 678888865 498763 25678999997 68899999999999999998643
No 254
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.88 E-value=2.4e-20 Score=183.55 Aligned_cols=329 Identities=18% Similarity=0.158 Sum_probs=209.9
Q ss_pred hhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcC
Q 012991 76 NSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAG 155 (452)
Q Consensus 76 ~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g 155 (452)
|.......++++.+++++|.+ ++++|+|||+|+.+++.++ +++||+| ++++.|.+....+ ...|
T Consensus 49 Y~~~~g~~~Leeaia~~~g~~---~vv~t~~Gt~Al~la~~al--------~~pGD~V-~~~~~f~~~~~~i----~~~G 112 (431)
T cd00617 49 YAGSKSFYDLEDAVQDLFGFK---HIIPTHQGRGAENILFSIL--------LKPGRTV-PSNMHFDTTRGHI----EANG 112 (431)
T ss_pred cCCCCCHHHHHHHHHHHHCCC---eEEEcCCHHHHHHHHHHHh--------CCCCCEE-ccCCcccchHHHH----HhCC
Confidence 344556789999999999984 8999999999999999876 5899987 5777777655444 4469
Q ss_pred cEEEEEeCCCCCC------ChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCC-cccccH---HHHHHHHHHcCCCEE
Q 012991 156 GSVVEVQLPFPLA------SEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMP-CVVIPV---RKLVKICRDEGVDQV 224 (452)
Q Consensus 156 ~~v~~~~~~~~~~------~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~t-G~~~~l---~~i~~l~~~~~~~~~ 224 (452)
.+++.++++...+ ..+.+ +++|++.|+.. ...++++|+++.++|++ |..+++ ++|.++|++||+ ++
T Consensus 113 a~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~--~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi-~l 189 (431)
T cd00617 113 AVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEV--GAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGI-PV 189 (431)
T ss_pred CEeEEEecccccccccccCCCCCcCHHHHHHHhCcc--cCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCC-EE
Confidence 9999997742211 12336 99999999531 01358999999999998 899865 577999999999 79
Q ss_pred EEecccccC-----------Cccccccc------cCccEEEEcCcccCcCCCCcEEEEEecC-ccccCCCCCceeccCCC
Q 012991 225 FVDAAHAMG-----------SIKIDVKE------IGADFYVSNLHKWFFCPPSVAFLYCRKS-ILSSDMHHPVVSHEFGN 286 (452)
Q Consensus 225 ivD~a~~~g-----------~~~~~~~~------~~~d~~~~s~~K~l~g~~G~G~l~~~~~-~~~~~l~~~~~~~~~~~ 286 (452)
|.|+++..+ .....+.. ...|.+++|++|...++.| |+++.+++ ++.+ + ..+.....+
T Consensus 190 i~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~G-G~i~~~d~~l~~~-~-~~~~~~~~~- 265 (431)
T cd00617 190 VLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIG-GFLALRDDELYEE-A-RQRVVLYEG- 265 (431)
T ss_pred EEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCccc-eEEEeCcHHHHHH-H-HHhccccCC-
Confidence 999997643 11111111 1478999999997666765 78888874 6554 1 111000000
Q ss_pred CcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccc
Q 012991 287 GLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLR 366 (452)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (452)
....|..+.....++..+++... ..+.+.+ ..+.++++.+.|.+. |+.+..|.+ ++++++.++.-..
T Consensus 266 -----~~~~gG~~~r~~~A~A~gL~e~~----~~~~l~~-~~~~r~~l~~~L~~~-G~~v~~P~G--gh~v~~d~~~~~~ 332 (431)
T cd00617 266 -----FVTYGGMAGRDMEALAQGLREAV----EEDYLRH-RVEQVRYLGDRLDEA-GVPIVEPAG--GHAVFIDAREFLP 332 (431)
T ss_pred -----ccccccccHHHHHHHHHHHHhcc----cHHHHHH-HHHHHHHHHHHHHHC-CCCccCCCc--ceEEEEEhHHhcC
Confidence 00012222222222222332211 1233333 344668899999988 888887765 6788877653111
Q ss_pred c--CChhhHHHHHHHHhhhcceEee-ecccCCCCCCCCCCCCCCCCCCccceEEecccc-cCCHHHHHHHHHHHHHHHhc
Q 012991 367 V--MGEDDALRLRGHLRVRFGVEVP-IHYQAPKDDGQPQAGARDKDGIITGYARISHQV-YNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 367 ~--~~~~~~~~l~~~L~~~~gI~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~t~~di~~l~~~l~~~~~~ 442 (452)
. .++.++..++.+|.++.||.+. .+....+.. ..-... .......+|+++.- .-|.++++.++++|..+.++
T Consensus 333 ~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~--~~~~~~--~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 333 HIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRD--PNTGEN--KYPELELVRLAIPRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred CCCcccCcHHHHHHHHHHHcCeeEEeecceecccC--CCCCcc--cCCccceeEEeccccccCHHHHHHHHHHHHHHHhh
Confidence 0 0123578889888888899862 222110000 000000 01124689999873 34899999999999999976
Q ss_pred cc
Q 012991 443 GQ 444 (452)
Q Consensus 443 ~~ 444 (452)
..
T Consensus 409 ~~ 410 (431)
T cd00617 409 RE 410 (431)
T ss_pred Hh
Confidence 43
No 255
>PRK08637 hypothetical protein; Provisional
Probab=99.88 E-value=3.3e-20 Score=183.27 Aligned_cols=327 Identities=17% Similarity=0.155 Sum_probs=196.7
Q ss_pred HHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhC-----CC--CCCcEEEecChhHHHHHHHHHhhcccccCCC
Q 012991 55 VLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLIN-----AD--DVGEISLVDNATTAAAIVLQQIGRGFTEGRF 127 (452)
Q Consensus 55 v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-----~~--~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~ 127 (452)
+++++.+...... ....+.|....+...+|+.+++++. .. +.++|++|+|+++++.+++.++ .
T Consensus 21 ~~~~~~~~~~~~~--~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l--------~ 90 (388)
T PRK08637 21 YLSSLQDLLNDLT--PDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLF--------V 90 (388)
T ss_pred hHHHHHHHHHhhc--cccccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHh--------c
Confidence 5555555544321 1222345556678888888887652 21 1257899999999999999976 5
Q ss_pred CCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCccc
Q 012991 128 HRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVV 206 (452)
Q Consensus 128 ~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~ 206 (452)
++||+|++++|.|+.....+. ...|.+++.+++. .++ +.+ ++++++.++.. ..+...++++++|+||||..
T Consensus 91 ~~gd~Vlv~~P~y~~~~~~~~---~~~g~~vv~v~~~--~~~-~~~d~~~l~~~~~~~--~~~~~~~~~~~~P~NPTG~~ 162 (388)
T PRK08637 91 DQGDTVLLPDHNWGNYKLTFN---TRRGAEIVTYPIF--DED-GGFDTDALKEALQAA--YNKGKVIVILNFPNNPTGYT 162 (388)
T ss_pred CCCCEEEEcCCCCccHHHHHH---HhcCCEEEEeccc--CCC-CcCCHHHHHHHHHhh--ccCCCEEEEEeCCCCCCCCC
Confidence 899999999999988755442 2358999998651 122 234 88898887521 02455678899999999999
Q ss_pred ccHH---HHHHHHHH-----cCCCEEEEecccccCCc----ccc----ccccCcc---EEEEcCcccCcCCCC--cEEEE
Q 012991 207 IPVR---KLVKICRD-----EGVDQVFVDAAHAMGSI----KID----VKEIGAD---FYVSNLHKWFFCPPS--VAFLY 265 (452)
Q Consensus 207 ~~l~---~i~~l~~~-----~~~~~~ivD~a~~~g~~----~~~----~~~~~~d---~~~~s~~K~l~g~~G--~G~l~ 265 (452)
++.+ +|+++|++ |++ ++|+|+++..-.. ..+ +...... +.+.|++|. ++.+| +|+++
T Consensus 163 ~s~~~~~~l~~~~~~~~~~~~~~-~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~-~~~pGlRlG~~~ 240 (388)
T PRK08637 163 PTEKEATAIVEAIKELADAGTKV-VAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKE-EFVWGFRVGFIT 240 (388)
T ss_pred CCHHHHHHHHHHHHHHHhcCCcE-EEEecccchhcccCCccchhhHHHhhcccccceEEEecccccc-CCCcccceEEEE
Confidence 8854 56676665 899 7999998753211 111 1111112 233499995 66666 78887
Q ss_pred Eec------CccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHH
Q 012991 266 CRK------SILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLA 339 (452)
Q Consensus 266 ~~~------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~ 339 (452)
+.. ++.+. +....... ... .....+...+.++..+++. ..+..-.+..+..+++..+.+.+.|.
T Consensus 241 ~~~~~~~~~~l~~~-~~~~~~~~-------~~~-~~~~~s~~~q~a~~~~l~~-~~~~~~~~~~~~~~~~r~~~~~~~l~ 310 (388)
T PRK08637 241 FGTKAGSSQTVKEA-LEKKVKGL-------IRS-NISNGPHPSQSAVLRALNS-PEFDKEKQEKFQILKERYEKTKEVLY 310 (388)
T ss_pred EccccCCcHHHHHH-HHHHHHHH-------hhc-ccCCCCcHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 642 33332 10000000 000 0012223333333333321 00000123334445555566666675
Q ss_pred HHc---CCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceE
Q 012991 340 NAW---GTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYA 416 (452)
Q Consensus 340 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i 416 (452)
+.. ++.+..+++ +.++|+.++ +.+..++.+.|.+++||.+.. ...+++
T Consensus 311 ~~~~~~~~~~~~~~~--g~~~~~~l~-------~~~~~~l~~~l~~~~gv~~~~--------------------~~~~~i 361 (388)
T PRK08637 311 DGKYDDAWQAYPFNS--GYFMCLKLK-------GVDAEELRVHLLEKYGIGTIA--------------------LNETDL 361 (388)
T ss_pred hhCCCCCcccccccc--eEEEEecCC-------hHHHHHHHHHHhhhcceEEEe--------------------ccCCce
Confidence 542 345444443 678888875 346678988886556998742 113689
Q ss_pred EecccccCCHHHHHHHHHHHHHHHh
Q 012991 417 RISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 417 Ris~~~~~t~~di~~l~~~l~~~~~ 441 (452)
||+++. .+.++++..++.|+++++
T Consensus 362 Ri~~~~-~~~~~i~~~~~~l~~~~~ 385 (388)
T PRK08637 362 RIAFSC-VEEEDIPELFDSIYKAIK 385 (388)
T ss_pred EEEeec-CCHHHHHHHHHHHHHHHH
Confidence 999986 468889999999988875
No 256
>PLN02397 aspartate transaminase
Probab=99.88 E-value=4.9e-20 Score=183.55 Aligned_cols=340 Identities=13% Similarity=0.084 Sum_probs=203.4
Q ss_pred CCCeEEeccCC-CCC-CcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCC-----CCcEE--EecCh
Q 012991 37 QHGVARINNGS-FGS-CPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADD-----VGEIS--LVDNA 107 (452)
Q Consensus 37 ~~~~~~l~~~~-~~~-~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~-----~~~i~--~t~g~ 107 (452)
+...+.|+.+. +.+ .++.+.+++.+...... .+.....|....+..++|+++++++.... ++.|. .+.+|
T Consensus 47 ~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~-~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g 125 (423)
T PLN02397 47 SPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLL-AGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSG 125 (423)
T ss_pred CcceEecccceeeCCCCCcccchHHHHHHHHhh-ccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccc
Confidence 34567777764 233 33335556655543322 22222346677788999999999774221 12332 13444
Q ss_pred hHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhcccc
Q 012991 108 TTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKK 186 (452)
Q Consensus 108 t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~ 186 (452)
+.+..+++..+. .+.+||+|++++|.|+.+...+ +..|.+++.+++.. .+...+ ++.+++.+++.
T Consensus 126 ~Ga~~l~~~~~~------~~~pGd~Vlv~~P~y~~y~~~~----~~~g~~~~~v~l~~--~~~~~~d~~~l~~~l~~~-- 191 (423)
T PLN02397 126 TGSLRLGAEFLA------RFYPGSTIYIPNPTWGNHHNIF----RDAGVPVRTYRYYD--PKTRGLDFDGLLEDLKAA-- 191 (423)
T ss_pred hHHHHHHHHHHH------HhCCCCEEEEeCCCchhHHHHH----HHcCCeEEEeeccc--CcCCccCHHHHHHHHHhC--
Confidence 434332222221 2469999999999999875555 44699999986521 111233 77787777532
Q ss_pred CCCceEEEEEeccCCCCcccccH---HHHHHHHHHcCCCEEEEecccccCCc--------cc-cccccC-ccEEEEcCcc
Q 012991 187 DGKMIRLAIIDHITSMPCVVIPV---RKLVKICRDEGVDQVFVDAAHAMGSI--------KI-DVKEIG-ADFYVSNLHK 253 (452)
Q Consensus 187 ~~~~~~lv~~~~~~n~tG~~~~l---~~i~~l~~~~~~~~~ivD~a~~~g~~--------~~-~~~~~~-~d~~~~s~~K 253 (452)
.++++++++++|+||||.+++. ++|+++|++|++ ++|+|+++..-.. +. .+...+ ..+++.|++|
T Consensus 192 -~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~-~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK 269 (423)
T PLN02397 192 -PDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNH-LPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAK 269 (423)
T ss_pred -CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCc-EEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcc
Confidence 3568899999999999999985 467888999999 7999999753221 11 111111 2367779999
Q ss_pred cCcCCCC--cEEEE--E-ecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHH---HHHhhcCHHHHHH
Q 012991 254 WFFCPPS--VAFLY--C-RKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTF---VSRFEGGIDGIMQ 325 (452)
Q Consensus 254 ~l~g~~G--~G~l~--~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~---~~~~~~g~~~~~~ 325 (452)
. ++++| +|+++ . +++.+.. +...... .........+...+.++..+++. ...+...++.+++
T Consensus 270 ~-~~~~G~RvG~~v~~~~~~~~~~~-~~~~~~~--------~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~ 339 (423)
T PLN02397 270 N-MGLYGERVGALSVVCKSADVAVR-VKSQLKL--------IARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMAD 339 (423)
T ss_pred c-CCCccccceEEEEEeCCHHHHHH-HHHHHHH--------HHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 6 77777 78875 3 2332221 0000000 00000011222222222222321 1110012466778
Q ss_pred HHHHHHHHHHHHHHHHcC----CCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCC
Q 012991 326 RNHEQALKMARMLANAWG----TSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQP 401 (452)
Q Consensus 326 ~~~~~~~~l~~~L~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~ 401 (452)
+++++++.+.+.|.++ + +.+..|++ ++++|..++ .++++.|.+++||.+.
T Consensus 340 ~~~~rr~~l~~~L~~~-~~~~~~~~~~p~g--g~fl~~~l~-----------~~~~~~Ll~~~~V~v~------------ 393 (423)
T PLN02397 340 RIISMRQKLYDALEAR-GSPGDWSHITKQI--GMFSFTGLN-----------KEQVDRMTKEYHIYMT------------ 393 (423)
T ss_pred HHHHHHHHHHHHHHhc-CCCCCCCcccCCc--eEEEecCCC-----------HHHHHHHHHhCCEEEC------------
Confidence 8899999999999987 5 55555554 677776542 3478888888899983
Q ss_pred CCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 402 QAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 402 ~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
..+ |+++.. .+.++++.++++|+++++.
T Consensus 394 ----------~~~--Ri~~~~-~~~~~i~~~~~~i~~~~~~ 421 (423)
T PLN02397 394 ----------RDG--RISMAG-LSSKNVPYLADAIHAVVTN 421 (423)
T ss_pred ----------CCC--eEEEee-CCHHHHHHHHHHHHHHHhc
Confidence 113 999964 3788999999999999863
No 257
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.87 E-value=8.2e-20 Score=160.02 Aligned_cols=356 Identities=20% Similarity=0.196 Sum_probs=231.2
Q ss_pred CCCCeEEeccCCCC-CCcHHHHHHHHHHHHH-----HhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhH
Q 012991 36 HQHGVARINNGSFG-SCPKSVLADQQKWQLK-----FLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATT 109 (452)
Q Consensus 36 ~~~~~~~l~~~~~~-~~p~~v~e~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~ 109 (452)
..++.|++|.-+.+ ..+++.++++-++-+. ++.. .....-..+-+.+..+.+++++|.+ .+-+|.|+-+
T Consensus 13 ~~r~~iNv~PiQrGGiLt~eArkal~E~gDGYSvCD~C~~--Grldei~kPpI~~F~~dlaeFlg~D---~~R~t~GARe 87 (382)
T COG1103 13 LTRGFINVNPIQRGGILTEEARKALLEWGDGYSVCDFCLE--GRLDEITKPPIKDFLEDLAEFLGMD---EVRVTAGARE 87 (382)
T ss_pred hhcCccccChhhccCcCCHHHHHHHHHhcCCcchhhhhcc--CccccccCCcHHHHHHHHHHHhCCc---eeeecccchh
Confidence 44577888876655 7788888888776432 1111 0001111223566777799999994 8899999999
Q ss_pred HHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCC
Q 012991 110 AAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDG 188 (452)
Q Consensus 110 a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~ 188 (452)
+=..+..++ .++||-|+++..+|.+.+.+ |++.|.++..+|-. . ..+..+ ++...+.|++....+
T Consensus 88 ~KfavMhal--------~~~gd~vV~D~~aHYttyvA----AEragl~v~eVp~t-g-~Pey~i~~e~y~~viee~~~~~ 153 (382)
T COG1103 88 AKFAVMHAL--------CKEGDWVVVDSLAHYTTYVA----AERAGLNVAEVPNT-G-YPEYKITPEGYAEVIEEVKDEG 153 (382)
T ss_pred hHHHHHHHh--------ccCCCEEEEcCcchHHHHHH----HHhcCCeEEecCCC-C-CCceEecHHHHHHHHHHHHhcc
Confidence 999999987 48999999999999887655 57789999999631 1 112223 444444444332223
Q ss_pred -CceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEe
Q 012991 189 -KMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCR 267 (452)
Q Consensus 189 -~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~ 267 (452)
..+.+.+++|+....|.+.|.+.++++|+++|+ ++++.+|+++|-++++....++||++.|+||++.+...+|++.++
T Consensus 154 g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gv-PlllN~AYt~Grmpvs~ke~g~DFiVgSGHKsmAAs~PiGvl~~~ 232 (382)
T COG1103 154 GDPPALALLTHVDGEYGNLADAKKVAKICREYGV-PLLLNCAYTVGRMPVSGKEIGADFIVGSGHKSMAASAPIGVLAMS 232 (382)
T ss_pred CCCceEEEEeccCCCcCCchhhHHHHHHHHHcCC-ceEeecceeeccccccccccCCCEEEecCccchhccCCeeEEeeh
Confidence 568999999999999999999999999999999 699999999999999999999999999999997666558999988
Q ss_pred cCccccCCCCCceeccCCCCcccc--cccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 012991 268 KSILSSDMHHPVVSHEFGNGLPIE--SAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS 345 (452)
Q Consensus 268 ~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~ 345 (452)
.+..+. . ... .|...+.+ .+...|.-.+++..+-+.+.+..+. .++.-+ -.+.++++.+.|..+.|++
T Consensus 233 eE~ae~-V-~r~----Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eR---VkrWde-Ev~kaR~fv~elEkigg~~ 302 (382)
T COG1103 233 EEWAEI-V-LRR----SGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVER---VKRWDE-EVEKARWFVAELEKIGGVK 302 (382)
T ss_pred hHHHHH-H-Hhh----cccccccceeeeecccccCchHHHHHhcCHHHHHH---HHHHHH-HHHHHHHHHHHHHHhhhHH
Confidence 776654 1 000 01101111 0111222223333333333333321 222222 2467889999999997775
Q ss_pred cCCCcccccceEEEEcCCcc--ccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEeccccc
Q 012991 346 LGSPPEICAAMVMVGLPSRL--RVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVY 423 (452)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~ 423 (452)
..+.....--.+.|..|--. ..+......-+++.|.++ ||.-. . .....++.+|+..
T Consensus 303 qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~R-gI~GI---~----------------~G~Tk~~K~svyG- 361 (382)
T COG1103 303 QLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKKR-GIHGI---Q----------------PGQTKYFKLSVYG- 361 (382)
T ss_pred HhCCCCcccceeeecCchHHHHHHhCcCCceeeHHHHHhc-Ccccc---c----------------cCceeEEEEEeec-
Confidence 44332111235556555100 000011122366677554 66521 1 1234589999865
Q ss_pred CCHHHHHHHHHHHHHHHhc
Q 012991 424 NTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 424 ~t~~di~~l~~~l~~~~~~ 442 (452)
.+.|+++.++++.+++++.
T Consensus 362 l~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 362 LSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 3799999999999999875
No 258
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.87 E-value=3.4e-20 Score=169.94 Aligned_cols=332 Identities=17% Similarity=0.196 Sum_probs=213.5
Q ss_pred CchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHH
Q 012991 70 PDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQA 149 (452)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~ 149 (452)
++..|++-+.+....++++++.+-|. -..+-++||.+|+..++.++ ..+||+|+.++.-|.+.+..+..
T Consensus 52 ~G~iYsRi~NPT~~vlE~RiAaLEGG---~aa~a~aSG~AA~~~ai~~l--------a~aGD~iVss~~LYGGT~~lf~~ 120 (426)
T COG2873 52 PGNIYTRIMNPTTDVLEERIAALEGG---VAALAVASGQAAITYAILNL--------AGAGDNIVSSSKLYGGTYNLFSH 120 (426)
T ss_pred CCceeeeccCchHHHHHHHHHHhhcc---hhhhhhccchHHHHHHHHHh--------ccCCCeeEeeccccCchHHHHHH
Confidence 45556666677788999999999776 35577889999999999988 58999999999999999999988
Q ss_pred HHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecc
Q 012991 150 YVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAA 229 (452)
Q Consensus 150 ~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a 229 (452)
...+.|+++++++ .++ ++.++++| .++||+|+++...||.+.+.|++.|+++||++|+ +++||.+
T Consensus 121 tl~~~Gi~v~fvd----~~d----~~~~~~aI------~~nTkavf~EtigNP~~~v~Die~ia~iAh~~gv-pliVDNT 185 (426)
T COG2873 121 TLKRLGIEVRFVD----PDD----PENFEAAI------DENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGV-PLIVDNT 185 (426)
T ss_pred HHHhcCcEEEEeC----CCC----HHHHHHHh------CcccceEEEEeccCCCccccCHHHHHHHHHHcCC-cEEEecC
Confidence 7789999999994 233 79999999 7999999999999999999999999999999999 7999998
Q ss_pred cccCCccccccccCccEEEEcCcccCcCCCC--cEEEEEecCccccCC--CCCcee-cc--C-CCCcc---------ccc
Q 012991 230 HAMGSIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSSDM--HHPVVS-HE--F-GNGLP---------IES 292 (452)
Q Consensus 230 ~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l--~~~~~~-~~--~-~~~~~---------~~~ 292 (452)
.+.+.+ +..-+.|+|+|+.|.+||++ +.| +|-+++.....+... +.|.+. .+ | |.... ...
T Consensus 186 ~atpyl-~rP~~hGADIVvHS~TK~ig-GhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~ 263 (426)
T COG2873 186 FATPYL-CRPIEHGADIVVHSATKYIG-GHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKA 263 (426)
T ss_pred CCccee-cchhhcCCCEEEEeeccccc-CCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHH
Confidence 777643 23334589999999999854 444 677777655554300 111110 00 0 00000 000
Q ss_pred ccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCc-CCC---------------cccccce
Q 012991 293 AWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSL-GSP---------------PEICAAM 356 (452)
Q Consensus 293 ~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~---------------~~~~~~~ 356 (452)
...+..+..+.++-..+...+.-+ +.+.-..+|..+++..+.+.|.+.|.+.. ..| +...+.+
T Consensus 264 r~~~lRDlGa~lsPfnAfl~lqGl-ETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~g~v 342 (426)
T COG2873 264 RVQLLRDLGATLSPFNAFLLLQGL-ETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGAV 342 (426)
T ss_pred HHHHHHhcccccCcHHHHHHHhch-hhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhccCCCceE
Confidence 001111111112222222222200 11223355667888889999999876642 222 1235789
Q ss_pred EEEEcCCccccCCh-hhHHHHHHHHhhh---cceEe-ee-cccCCCCCCCCCCCC--CCCCCCccceEEecccccCCHHH
Q 012991 357 VMVGLPSRLRVMGE-DDALRLRGHLRVR---FGVEV-PI-HYQAPKDDGQPQAGA--RDKDGIITGYARISHQVYNTLED 428 (452)
Q Consensus 357 ~~~~~~~~~~~~~~-~~~~~l~~~L~~~---~gI~v-~~-~~~~~~~~~~~~~~~--~~~~~~~~~~iRis~~~~~t~~d 428 (452)
+.|.+. ++ ...+++.+.|.-- .+|.= ++ ..++ .+.-+.+... +.+-+..++.||+|++ .||
T Consensus 343 ltF~~k------gg~ea~~~fi~~l~L~s~laNvGD~rsLvIHP-AsTTH~ql~~ee~~~aGv~~~~IRlSVG----IEd 411 (426)
T COG2873 343 LTFGVK------GGYEAGKKFIDALKLFSHLANIGDARSLVIHP-ASTTHRQLSEEEQAAAGVTPDLIRLSVG----IED 411 (426)
T ss_pred EEEEec------ChHHHHHHHHHHHHHHHhhccccccceeEecC-cccchhcCCHHHHHhcCCCCCcEEEEec----cCC
Confidence 999886 23 2345566655311 12210 11 1111 1111111111 1123677899999997 567
Q ss_pred HHHHHHHHHHHHh
Q 012991 429 YEKFRDAVILLVE 441 (452)
Q Consensus 429 i~~l~~~l~~~~~ 441 (452)
++.++..|+..++
T Consensus 412 ~~DiiaDl~qAl~ 424 (426)
T COG2873 412 IDDIIADLEQALE 424 (426)
T ss_pred HHHHHHHHHHHHh
Confidence 7777777777654
No 259
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.87 E-value=1e-19 Score=180.84 Aligned_cols=339 Identities=12% Similarity=0.141 Sum_probs=213.9
Q ss_pred CCCeEEeccC----CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHH
Q 012991 37 QHGVARINNG----SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAA 112 (452)
Q Consensus 37 ~~~~~~l~~~----~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~ 112 (452)
+..++.+..+ ..|..++.|.+++.+.+.... ..+..+ ..+..+++++.++++++. +.++|++|||+|+.
T Consensus 30 g~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~-~~~~~~---~~~~~~~~~~~l~~~~~~---~~~~~~~SGs~A~e 102 (400)
T PTZ00125 30 GKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLT-LTSRAF---YNDVLGLAEKYITDLFGY---DKVLPMNSGAEAGE 102 (400)
T ss_pred CCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcc-cccccc---cCHHHHHHHHHHHhCCCC---CEEEEeCCcHHHHH
Confidence 4445554433 234567889999998876431 111111 245678899999998866 48899999999999
Q ss_pred HHHHHhhcccc--cCCC-CCCCEEEEeCCcchhHHHHHHHHHHhcCc---------EEEEEeCCCCCCChHHHHHHHHHH
Q 012991 113 IVLQQIGRGFT--EGRF-HRNDTVLMLHCAFQAVKKSIQAYVTRAGG---------SVVEVQLPFPLASEEEIINEFKKG 180 (452)
Q Consensus 113 ~~~~~l~~~~~--~~~~-~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~---------~v~~~~~~~~~~~~~~~~~~l~~~ 180 (452)
.++..+. .+. .... ..+++|++.+..|++.......+...... .+..+ +..+ ++++++.
T Consensus 103 ~al~~~~-~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~d----~~~le~~ 173 (400)
T PTZ00125 103 TALKFAR-KWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELV----DYND----VEALEKL 173 (400)
T ss_pred HHHHHHH-HHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEe----CCCC----HHHHHHH
Confidence 9998653 111 0001 13578888888777754333221110000 01111 1111 6888888
Q ss_pred HhccccCCCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCc----cccccccCccEEEEcC
Q 012991 181 IEKGKKDGKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSI----KIDVKEIGADFYVSNL 251 (452)
Q Consensus 181 i~~~~~~~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~----~~~~~~~~~d~~~~s~ 251 (452)
++ .+++++|+++.++|++|.+.| +++|.++|++||+ ++|+|++++ +|.. ..+.....+|++++|
T Consensus 174 l~-----~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~-lli~Dev~~g~g~~G~~~~~~~~~~~pd~~~~s- 246 (400)
T PTZ00125 174 LQ-----DPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNV-LLIVDEIQTGLGRTGKLLAHDHEGVKPDIVLLG- 246 (400)
T ss_pred hC-----CCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCC-EEEEeccccCCCccchhhHHHhcCCCCCEEEEc-
Confidence 84 357999999999999999998 9999999999999 899999985 4321 122333457888765
Q ss_pred cccCcCCC-CcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHH
Q 012991 252 HKWFFCPP-SVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQ 330 (452)
Q Consensus 252 ~K~l~g~~-G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~ 330 (452)
|++.++. ++|++++++++.+. +. ... .+ ..+ + .+.....+..++++.+.+. + +.++.+++
T Consensus 247 -K~l~~g~~~ig~v~~~~~~~~~-~~-~~~---~~------~t~-~-~~~~~~~aa~~~l~~i~~~--~---~~~~~~~~ 307 (400)
T PTZ00125 247 -KALSGGLYPISAVLANDDVMLV-IK-PGE---HG------STY-G-GNPLACAVAVEALEVLKEE--K---LAENAQRL 307 (400)
T ss_pred -ccccCCCcCcEEEEEcHHHHhh-cc-CCC---CC------CCC-C-cCHHHHHHHHHHHHHHHhc--C---HHHHHHHH
Confidence 9877654 68999999887775 21 110 00 011 1 1222334444556666531 3 45666777
Q ss_pred HHHHHHHHHHHcCC-CcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCC
Q 012991 331 ALKMARMLANAWGT-SLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKD 409 (452)
Q Consensus 331 ~~~l~~~L~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~ 409 (452)
.+++++.|.++.+. .........+.++++.++.. +..+..++.+.|.++ ||.+.+.
T Consensus 308 ~~~l~~~l~~l~~~~~~~~~~~~~g~~~~v~~~~~----~~~~~~~~~~~l~~~-Gv~v~~~------------------ 364 (400)
T PTZ00125 308 GEVFRDGLKELLKKSPWVKEIRGKGLLNAIVFDHS----DGVNAWDLCLKLKEN-GLLAKPT------------------ 364 (400)
T ss_pred HHHHHHHHHHHHhcCCCeEEEecccEEEEEEEccC----cchHHHHHHHHHHHC-CeEEeec------------------
Confidence 88888888765221 11111112356667666421 134567888888764 9998421
Q ss_pred CCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 410 GIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 410 ~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
..+++|++++...++++|++++++|++++..
T Consensus 365 --~~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~ 395 (400)
T PTZ00125 365 --HDNIIRFAPPLVITKEQLDQALEIIKKVLKS 395 (400)
T ss_pred --CCCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 2368999998888999999999999998865
No 260
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.87 E-value=4.2e-20 Score=181.44 Aligned_cols=316 Identities=16% Similarity=0.146 Sum_probs=198.6
Q ss_pred HHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEE
Q 012991 80 KGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVV 159 (452)
Q Consensus 80 ~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~ 159 (452)
+..+++++.+++++|. +++++++|||+|+.+++.++ .+++||+|+++.++|.++..++. ..|++++
T Consensus 31 ~~~~~~e~~la~~~g~---~~~v~~~sgt~al~~~l~~~-------~~~~Gd~Viv~~~t~~~~~~~~~----~~G~~~v 96 (375)
T PRK11706 31 GFTRRCQQWLEQRFGS---AKVLLTPSCTAALEMAALLL-------DIQPGDEVIMPSYTFVSTANAFV----LRGAKIV 96 (375)
T ss_pred HHHHHHHHHHHHHhCC---CeEEEECCHHHHHHHHHHHh-------CCCCCCEEEECCCCcHHHHHHHH----HcCCEEE
Confidence 4568888999999988 48999999999999887765 35899999999999999876654 4599999
Q ss_pred EEeCCCCCCCh-HHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccc
Q 012991 160 EVQLPFPLASE-EEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKI 237 (452)
Q Consensus 160 ~~~~~~~~~~~-~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~ 237 (452)
.+++ +.+ ..+ ++++++.+ ++++++|+++| ++|...++++|.++|+++|+ ++|+|++|+.|.. .
T Consensus 97 ~~d~----d~~~~~~d~~~le~~i------~~~tk~i~~~~---~~G~~~~~~~i~~la~~~~i-~vIeD~a~a~g~~-~ 161 (375)
T PRK11706 97 FVDI----RPDTMNIDETLIEAAI------TPKTRAIVPVH---YAGVACEMDTIMALAKKHNL-FVVEDAAQGVMST-Y 161 (375)
T ss_pred EEec----CCCcCCcCHHHHHHhc------CCCCeEEEEeC---CCCCccCHHHHHHHHHHcCC-EEEEECccccccc-c
Confidence 9965 222 234 89999998 56889998875 58999999999999999999 7999999998873 1
Q ss_pred ccccc--CccEEEEcCc--ccCcCCCCcEEEEEe-cCccccCCCCCceeccCCCC-------cc--cccccccccCcccc
Q 012991 238 DVKEI--GADFYVSNLH--KWFFCPPSVAFLYCR-KSILSSDMHHPVVSHEFGNG-------LP--IESAWIGTRDYSAQ 303 (452)
Q Consensus 238 ~~~~~--~~d~~~~s~~--K~l~g~~G~G~l~~~-~~~~~~~l~~~~~~~~~~~~-------~~--~~~~~~~~~~~~~~ 303 (452)
+-... ..|+-++|+| |.+..+.| |+++++ +++..+ + ..... .|.. .. ......|+.....-
T Consensus 162 ~~~~~g~~~~~~~~Sf~~~K~l~~g~g-G~~~~~~~~~~~~-~-~~~~~--~g~~~~~~~~~~~~~~~~~~~g~~~~~~~ 236 (375)
T PRK11706 162 KGRALGTIGHIGCFSFHETKNYTAGEG-GALLINDPALIER-A-EIIRE--KGTNRSQFFRGQVDKYTWVDIGSSYLPSE 236 (375)
T ss_pred CCeeeecCcCEEEEeCCCCccccccCC-eEEEECCHHHHHH-H-HHHHH--cCCCcchhhccCCCcceeeecccccCcCH
Confidence 11111 2477788877 97654444 555554 444432 1 11100 1100 00 00001122222111
Q ss_pred ccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHc--C-CCcCC-Ccc--cccceEEEEcCCccccCChhhHHHHH
Q 012991 304 LVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAW--G-TSLGS-PPE--ICAAMVMVGLPSRLRVMGEDDALRLR 377 (452)
Q Consensus 304 ~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~--~-~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~ 377 (452)
+....++..+. .++.+.++.+++.+++.+.|..++ + +.+.. +.. ....++++.++ ++.+..++.
T Consensus 237 ~~aa~~~~ql~----~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~r~~l~ 306 (375)
T PRK11706 237 LQAAYLWAQLE----AADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLR------DLEDRSALI 306 (375)
T ss_pred HHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEEC------CcCCHHHHH
Confidence 11222223333 356666777788888888887664 1 33221 211 12334555554 234678899
Q ss_pred HHHhhhcceEeeecccCCCCCCCCCCC-C-CCCC----CCccceEEecccccCCHHHHHHHHHHHHHHH
Q 012991 378 GHLRVRFGVEVPIHYQAPKDDGQPQAG-A-RDKD----GIITGYARISHQVYNTLEDYEKFRDAVILLV 440 (452)
Q Consensus 378 ~~L~~~~gI~v~~~~~~~~~~~~~~~~-~-~~~~----~~~~~~iRis~~~~~t~~di~~l~~~l~~~~ 440 (452)
+.|.++ ||.++..+.+.+.-...... . .... ......+-+.++...+.+|++.+++.|++++
T Consensus 307 ~~L~~~-gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 307 NFLKEA-GIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred HHHHHC-CCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence 999775 99986554432210000000 0 0000 1224457777777789999999999999865
No 261
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.87 E-value=5.6e-20 Score=162.76 Aligned_cols=332 Identities=14% Similarity=0.156 Sum_probs=227.4
Q ss_pred CCeEEeccCCC-C-CCcHHHHHHHHHHHHHHhcCCchhhh-hhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHH
Q 012991 38 HGVARINNGSF-G-SCPKSVLADQQKWQLKFLQQPDDFYF-NSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIV 114 (452)
Q Consensus 38 ~~~~~l~~~~~-~-~~p~~v~e~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~ 114 (452)
.++++|..+.+ + ...+++.++-+..+..+...+++... -+.+..-..++++||++.+-+ |.+ +.+++-.|+.-+
T Consensus 67 k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~rE--D~i-lypscfdANag~ 143 (417)
T KOG1359|consen 67 KKILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHGRE--DTI-LYPSCFDANAGA 143 (417)
T ss_pred cceeeecccccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhCCC--ceE-EeccccccchHH
Confidence 34666654443 3 34455889988888887666655422 344556678999999998884 444 455555677777
Q ss_pred HHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEE
Q 012991 115 LQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLA 194 (452)
Q Consensus 115 ~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv 194 (452)
+.++ +.|.|.|+.+...|.|+...++. |++.+ .+ + +-.++..+... +..+.++|
T Consensus 144 feai--------l~pedAvfSDeLNhASIIdGirL-ckry~----h~-------d----v~~l~~~l~~a--~k~r~klv 197 (417)
T KOG1359|consen 144 FEAI--------LTPEDAVFSDELNHASIIDGIRL-CKRYR----HV-------D----VFDLEHCLISA--CKMRLKLV 197 (417)
T ss_pred HHHh--------cChhhhhhccccccchhhhhhHH-Hhhhc----cc-------h----hHHHHHHHHHh--hhheEEEE
Confidence 7766 68999999999999999999876 56443 22 1 23333333211 14678999
Q ss_pred EEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCcccc-------cc-ccCccEEEEcCcccCcCCCCcEEEEE
Q 012991 195 IIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKID-------VK-EIGADFYVSNLHKWFFCPPSVAFLYC 266 (452)
Q Consensus 195 ~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~-------~~-~~~~d~~~~s~~K~l~g~~G~G~l~~ 266 (452)
+-....++.|.+.|+++|..++++||. ++++|++|+-|..... +. ..++|++..++.|.++|..| |+..+
T Consensus 198 ~TDg~FSMDGdiaPl~ei~~La~kYga-LlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~G-Gyttg 275 (417)
T KOG1359|consen 198 VTDGVFSMDGDIAPLEEISQLAKKYGA-LLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASG-GYTTG 275 (417)
T ss_pred EecceeccCCCcccHHHHHHHHHhcCc-EEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCC-CCccC
Confidence 999999999999999999999999999 9999999986554221 11 12589999999999877776 88888
Q ss_pred ecCccccCC---CCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcC
Q 012991 267 RKSILSSDM---HHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWG 343 (452)
Q Consensus 267 ~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~ 343 (452)
++.++.. + ..|++ +..+.+.+-.-....+++.+. ....+.++.+.+.+++++..+.. |
T Consensus 276 p~~li~l-lrqr~Rpyl-------------FSnslppavV~~a~ka~dllm----~s~~~i~~~~a~~qrfr~~me~a-G 336 (417)
T KOG1359|consen 276 PKPLISL-LRQRSRPYL-------------FSNSLPPAVVGMAAKAYDLLM----VSSKEIQSRQANTQRFREFMEAA-G 336 (417)
T ss_pred ChhHHHH-HHhcCCcee-------------ecCCCChhhhhhhHHHHHHHH----hhHHHHHHHHHHHHHHHHHHHhc-C
Confidence 8877653 1 12221 112222212222334555555 35666778899999999988776 8
Q ss_pred CCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEeccccc
Q 012991 344 TSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVY 423 (452)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~ 423 (452)
+.+.+..+...+++ +. +..-+.+.++.|.++ ||+|-....+.. ......||+.++..
T Consensus 337 ftIsg~~hPI~pv~---lG------da~lA~~~ad~lLk~-Gi~Vigfs~PvV-------------P~gkariRVqiSAa 393 (417)
T KOG1359|consen 337 FTISGASHPICPVM---LG------DARLASKMADELLKR-GIYVIGFSYPVV-------------PKGKARIRVQISAA 393 (417)
T ss_pred ceecCCCCCcccee---cc------cHHHHHHHHHHHHhc-CceEEeecCCcC-------------CCCceEEEEEEehh
Confidence 88766554322232 32 334566788888775 999854444422 23445799999989
Q ss_pred CCHHHHHHHHHHHHHHHhc
Q 012991 424 NTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 424 ~t~~di~~l~~~l~~~~~~ 442 (452)
+|+|||+++++++.++.+.
T Consensus 394 Ht~edid~~i~Af~~vgr~ 412 (417)
T KOG1359|consen 394 HTEEDIDRLIEAFSEVGRF 412 (417)
T ss_pred cCHHHHHHHHHHHHHHHHh
Confidence 9999999999999888754
No 262
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.87 E-value=2.8e-20 Score=180.51 Aligned_cols=310 Identities=16% Similarity=0.199 Sum_probs=201.5
Q ss_pred hhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHH
Q 012991 72 DFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYV 151 (452)
Q Consensus 72 ~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a 151 (452)
..|++...+....+++.++++.|. +.++++++|..|+..++.++ +++||+|+++...|.+....+..+.
T Consensus 47 ~~Y~R~gnPt~~~le~~la~Le~g---~~a~~~~SGmaAi~~~l~~l--------l~~Gd~iv~~~~~Y~~t~~~~~~~l 115 (386)
T PF01053_consen 47 YIYSRYGNPTVRALEQRLAALEGG---EDALLFSSGMAAISAALLAL--------LKPGDHIVASDDLYGGTYRLLEELL 115 (386)
T ss_dssp CSBTTTC-HHHHHHHHHHHHHHT----SEEEEESSHHHHHHHHHHHH--------S-TTBEEEEESSSSHHHHHHHHHCH
T ss_pred cceeccccccHHHHHHHHHHhhcc---cceeeccchHHHHHHHHHhh--------cccCCceEecCCccCcchhhhhhhh
Confidence 446666678889999999999988 47888899999999999887 6899999999999999988888777
Q ss_pred HhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcC-CCEEEEeccc
Q 012991 152 TRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEG-VDQVFVDAAH 230 (452)
Q Consensus 152 ~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~-~~~~ivD~a~ 230 (452)
.+.|+++.+++ ..+ .+++++++ .+++++|+++.|+||+..+.|+++|+++||++| + +++||.+.
T Consensus 116 ~~~gv~v~~~d----~~d----~~~l~~~l------~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~-~~vVDnT~ 180 (386)
T PF01053_consen 116 PRFGVEVTFVD----PTD----LEALEAAL------RPNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDI-LVVVDNTF 180 (386)
T ss_dssp HHTTSEEEEES----TTS----HHHHHHHH------CTTEEEEEEESSBTTTTB---HHHHHHHHHHTTT--EEEEECTT
T ss_pred cccCcEEEEeC----chh----HHHHHhhc------cccceEEEEEcCCCcccccccHHHHHHHHHHhCCc-eEEeeccc
Confidence 88999999994 333 78999999 579999999999999999999999999999998 9 89999988
Q ss_pred ccCCccccccccCccEEEEcCcccCcCCCC---cEEEEEec--CccccCCCCCceeccCCCCcccccccccccCcccccc
Q 012991 231 AMGSIKIDVKEIGADFYVSNLHKWFFCPPS---VAFLYCRK--SILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLV 305 (452)
Q Consensus 231 ~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G---~G~l~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (452)
+.+.. .+.-.+|+|+++.|.+|++. +.| .|.+++++ ++... +. .. .. ..|....
T Consensus 181 atp~~-~~pL~~GaDivv~S~TKyl~-Ghsdv~~G~vv~~~~~~~~~~-l~-~~-~~-----------~~G~~~~----- 239 (386)
T PF01053_consen 181 ATPYN-QNPLELGADIVVHSATKYLS-GHSDVMGGAVVVNGSSELYDR-LR-EF-RR-----------LLGATLS----- 239 (386)
T ss_dssp THTTT-C-GGGGT-SEEEEETTTTTT-TSSSE-EEEEEESSHHHHHHH-HH-HH-HH-----------HHT-B-------
T ss_pred cceee-eccCcCCceEEEeecccccc-CCcceeeEEEEECchhhhhhh-hc-ch-hh-----------hcCccch-----
Confidence 76643 23334589999999999854 455 57777765 33332 10 00 00 0121111
Q ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc--------------ccccceEEEEcCCccccCCh
Q 012991 306 IPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP--------------EICAAMVMVGLPSRLRVMGE 370 (452)
Q Consensus 306 ~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~~~~~~ 370 (452)
-..+...++.+ ..+.--.++..+++..+.+.|.+.|.++ |..|. ...++++.|.++ ..
T Consensus 240 p~da~ll~rgl-~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~------~~ 312 (386)
T PF01053_consen 240 PFDAWLLLRGL-RTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELK------GG 312 (386)
T ss_dssp HHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEES------SH
T ss_pred HHHHHHHhcCC-CcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEec------cc
Confidence 11222222211 1455557778889999999999987663 44331 134679999986 33
Q ss_pred h-hHHHHHHHHhhhcceEeeeccc------CCCCCCCCCCC--CCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 371 D-DALRLRGHLRVRFGVEVPIHYQ------APKDDGQPQAG--ARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 371 ~-~~~~l~~~L~~~~gI~v~~~~~------~~~~~~~~~~~--~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
. ....+.+.|. -+.+.+..+.. +.... +.... .+...+..++.||+|++ .||.+.+++.|++.++
T Consensus 313 ~~~~~~f~~~l~-l~~~~~SlGg~~SLi~~p~~~~-h~~~~~e~~~~~Gi~~~liRlSvG----lEd~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 313 EEAARRFLDALK-LFSIAPSLGGVESLISHPASTS-HRSLSPEERAEAGISDGLIRLSVG----LEDPDDLIADLEQALE 386 (386)
T ss_dssp HHHHHHHHHH-S-SSEESSS-SSSS-EEEETTCTT-TTTSCHHHHHHTTS-TTEEEEE------SS-HHHHHHHHHHHHH
T ss_pred hhhhHhHHhhhh-hHhhhhhcCCcccccccccchh-hccCChhhhhccCCCCCeeEEEec----cCCHHHHHHHHHHhcC
Confidence 3 5567777773 23333322211 10000 00000 01122567789999998 4667777877777653
No 263
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.86 E-value=7.5e-19 Score=165.36 Aligned_cols=325 Identities=15% Similarity=0.178 Sum_probs=220.7
Q ss_pred CCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCC
Q 012991 48 FGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRF 127 (452)
Q Consensus 48 ~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~ 127 (452)
.|..++.+.+++.+....+. ..++.+ ..+...++.+.|++..+ . .+.++|++||+||++.++. ++|+|.. -
T Consensus 56 lGH~hP~iv~al~~Q~~kl~-h~sn~~---~~~~~~~la~~L~~~s~-~-~d~vff~NSGaEA~EaAiK-lARk~~~--~ 126 (404)
T COG4992 56 LGHCHPALVEALKEQAEKLW-HVSNLF---YNEPQAELAEKLVELSP-F-ADRVFFCNSGAEANEAALK-LARKYTG--D 126 (404)
T ss_pred cCCCCHHHHHHHHHHHHHhh-hccccc---CChHHHHHHHHHHhhCc-c-ccEEEEcCCcHHHHHHHHH-HHHHHcC--C
Confidence 45777889999999876652 222222 24456788888999887 2 5799999999999999998 6777743 1
Q ss_pred CCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEE----eCCC-----CCCChHHHHHHHHHHHhccccCCCceEEEEEec
Q 012991 128 HRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEV----QLPF-----PLASEEEIINEFKKGIEKGKKDGKMIRLAIIDH 198 (452)
Q Consensus 128 ~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~----~~~~-----~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~ 198 (452)
....+||....+||+-....-. .+.+.++- |+.. |.++ +++++++| +++|.+|+++.
T Consensus 127 ~~k~~Iia~~nsFHGRT~galS----~t~~~ky~~~F~Pl~~g~~~vpfnD----i~al~~ai------~~~taAvivEP 192 (404)
T COG4992 127 PEKSKIIAFENSFHGRTLGALS----ATGQPKYRKGFGPLLPGFRHVPFND----IEALEAAI------DEDTAAVIVEP 192 (404)
T ss_pred CCCcEEEEEcCCcCCccceeee----ccCChhhccCCCCCCCCceecCCCC----HHHHHHHh------ccCeEEEEEec
Confidence 2345899988888874322211 01111110 1100 1122 79999999 67999999999
Q ss_pred cCCCCccccc----HHHHHHHHHHcCCCEEEEeccccc-CCc----cccccccCccEEEEcCcccCcCCCCcEEEEEecC
Q 012991 199 ITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHAM-GSI----KIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKS 269 (452)
Q Consensus 199 ~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~~-g~~----~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~ 269 (452)
++--.|++.+ ++.+.++|++||+ ++|.|++|.. |-. ........+|+++.. |.|+|+..+|.++.++.
T Consensus 193 IQGEgGV~~~~~~fl~~lr~lCd~~g~-LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~tla--K~LgGG~PigA~la~~~ 269 (404)
T COG4992 193 IQGEGGVIPAPPEFLKALRELCDEHGA-LLILDEVQTGLGRTGKLFAYEHYGVEPDILTLA--KALGGGFPIGAMLATEE 269 (404)
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhCe-EEEEeccccCCCccchHHHHHHhCCCCCEEEee--ccccCCccceeeEEchh
Confidence 9999999876 6789999999999 9999999863 322 123334468999887 99988777999988844
Q ss_pred ccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcC-CCcCC
Q 012991 270 ILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWG-TSLGS 348 (452)
Q Consensus 270 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~ 348 (452)
.... +.+- . ..+++.|.| .+..+..++++.+. .+.+.++.+++..++.+.|.++.. +.++.
T Consensus 270 ~~~~--~~~G------~---HgSTfGGNp--LacAv~~a~l~~l~-----~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~ 331 (404)
T COG4992 270 IASA--FTPG------D---HGSTFGGNP--LACAVALAVLEVLL-----EEGLLENVREKGEYLLQRLRELKRRYPLVK 331 (404)
T ss_pred hhhc--CCCC------c---ccCCCCcCH--HHHHHHHHHHHHHc-----chhHHHHHHHHHHHHHHHHHHHhhcCCcee
Confidence 3432 2221 0 011112222 12222333444444 466788899999999999988732 33444
Q ss_pred CcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHH
Q 012991 349 PPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLED 428 (452)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~d 428 (452)
....++-++-+.+. ....+.++.+.+.++ |+.+-. ..++.+|+.+....+++|
T Consensus 332 ~vRG~GLmiGiel~------~~~~a~~~~~~~~~~-gvL~~~--------------------a~~~ViR~~PpL~i~~ee 384 (404)
T COG4992 332 EVRGRGLMIGIELK------EPYRARDIVRALREE-GVLVLP--------------------AGPNVIRFLPPLVITEEE 384 (404)
T ss_pred eeecceeEEEEEec------CcccHHHHHHHHHHC-CeEEec--------------------CCCCeEEecCCccCCHHH
Confidence 44455777777774 122478899999775 998742 234699999999999999
Q ss_pred HHHHHHHHHHHHhcc
Q 012991 429 YEKFRDAVILLVEEG 443 (452)
Q Consensus 429 i~~l~~~l~~~~~~~ 443 (452)
++..++++++.++..
T Consensus 385 i~~~~~~l~~~l~~~ 399 (404)
T COG4992 385 IDEALDALERALAAA 399 (404)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999754
No 264
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.86 E-value=3.1e-19 Score=178.00 Aligned_cols=344 Identities=14% Similarity=0.136 Sum_probs=215.2
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|...+.+.+++.+.+..... ... .....+...++.++|++.+... .+.+.|+++|++|++.++. ++|.|....
T Consensus 55 ~lGh~~p~v~~ai~~q~~~~~~-~~~--~~~~~~~~~~la~~l~~~~p~~-~~~v~f~~sGseA~e~A~k-lar~~~~~~ 129 (423)
T PRK05964 55 THGHNHPYIDQAIREQLDRLDH-VIF--AGFTHEPAERLAQRLVALTPGG-LDHVFFSDSGSVAVEVALK-MALQYWRNR 129 (423)
T ss_pred cCCCCCHHHHHHHHHHHhhCCC-ccc--cccCCHHHHHHHHHHHHhCCCC-CCEEEEeCCcHHHHHHHHH-HHHHHHHhc
Confidence 4567778899999988765311 111 0112344567888888887532 4689999999999999998 445442111
Q ss_pred C-CCCCEEEEeCCcchhHHHHHHHHHHhcC---------cEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEE
Q 012991 127 F-HRNDTVLMLHCAFQAVKKSIQAYVTRAG---------GSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAI 195 (452)
Q Consensus 127 ~-~~g~~Vl~~~~~~~s~~~~~~~~a~~~g---------~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~ 195 (452)
- ..+.+|+....+|++....+..+..... ..+..++. +.++.... .+.+++.+++. .+++++|+
T Consensus 130 ~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~~~~~l~~~l~~~---~~~iaavi 204 (423)
T PRK05964 130 GEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPF--PPDGYEQATLDALEALLEKH---AGEIAAFI 204 (423)
T ss_pred CCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCC--CcchhHHHHHHHHHHHHHhC---CCcEEEEE
Confidence 1 2346899999999887655433211100 11233332 22222222 78888888642 46788888
Q ss_pred Eec-cCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCc----cccccccCccEEEEcCcccCcCC-CCcEEE
Q 012991 196 IDH-ITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSI----KIDVKEIGADFYVSNLHKWFFCP-PSVAFL 264 (452)
Q Consensus 196 ~~~-~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~----~~~~~~~~~d~~~~s~~K~l~g~-~G~G~l 264 (452)
++. .....|...+ +++|.++|++||+ ++|+|++|+ +|-. ..+.....+|+++++ |++.|+ ..+|++
T Consensus 205 ~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~-llI~DEv~tg~gr~G~~~a~~~~~v~pDi~~~~--K~l~gG~~p~~av 281 (423)
T PRK05964 205 VEPLVQGAGGMLFYDPRYLAELRRICDRHGV-LLIFDEIATGFGRTGTLFACEQAGVSPDIMCLS--KGLTGGYLPLAAT 281 (423)
T ss_pred EecccccCCCcccCCHHHHHHHHHHHHHcCC-EEEEechhhCCCcCcchhHHHhcCCCCCeeeee--hhhhcCcccceEE
Confidence 887 5777787764 8899999999999 899999985 4322 112233467887665 998765 458888
Q ss_pred EEecCccccCCCCCceeccCCCCccccccccc--ccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHc
Q 012991 265 YCRKSILSSDMHHPVVSHEFGNGLPIESAWIG--TRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAW 342 (452)
Q Consensus 265 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~ 342 (452)
+.++++.+. +.... ... .....+ ..+.....+..++++.+.+ +.+.++..++.+++.+.|.++.
T Consensus 282 ~~~~~i~~~-~~~~~-----~~~---~~~~~~T~~~np~~~aaa~a~l~~l~~-----~~~~~~~~~~g~~l~~~l~~l~ 347 (423)
T PRK05964 282 LCTAEIFEA-FYSDD-----RAK---AFMHSPSYTANPLACAAANASLDLFED-----EPVLERVAALSAGLAEGLEPFR 347 (423)
T ss_pred EEcHHHHHh-hhcCC-----ccc---ccccCCCCCcCHHHHHHHHHHHHHHHh-----cCHHHHHHHHHHHHHHHHHhhc
Confidence 888888775 21100 000 000011 1233334444455555553 3467888899999999988764
Q ss_pred CCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccc
Q 012991 343 GTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQV 422 (452)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 422 (452)
...........+.++.+.+.+.. .......+...|.++ ||.+.. ..+.+|++++.
T Consensus 348 ~~~~i~~vrg~Gl~~~i~l~~~~---~~~~~~~l~~~l~~~-Gv~v~~---------------------~~~~lR~~p~l 402 (423)
T PRK05964 348 DLPGVADVRVLGAIGAVELDRPV---LERDGPALRAFALER-GVLLRP---------------------LGNTIYLMPPY 402 (423)
T ss_pred cCCCeEEeecccEEEEEEeccCc---chhHHHHHHHHHHHC-CeEEEe---------------------cCCEEEEeCCc
Confidence 33322222233566667664210 001256788888764 999852 12589999999
Q ss_pred cCCHHHHHHHHHHHHHHHhc
Q 012991 423 YNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 423 ~~t~~di~~l~~~l~~~~~~ 442 (452)
.+|++||+++++++++++++
T Consensus 403 ~~t~edId~~v~~l~~al~~ 422 (423)
T PRK05964 403 IITAEELDRITDAIVEVADE 422 (423)
T ss_pred ccCHHHHHHHHHHHHHHHhh
Confidence 99999999999999998864
No 265
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.86 E-value=1.7e-18 Score=167.80 Aligned_cols=345 Identities=14% Similarity=0.161 Sum_probs=231.5
Q ss_pred CCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCC
Q 012991 48 FGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRF 127 (452)
Q Consensus 48 ~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~ 127 (452)
.|...+.|.+++++.+....-.... +...+...++.++|.+++..+....++|+++||+|++.++. ++|.+
T Consensus 70 ~GH~hP~Vv~Av~~q~~~~~h~~~~---~~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiK-iAr~~----- 140 (447)
T COG0160 70 LGHNHPRVVEAVKRQLAKLNHTHTR---DLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIK-IARAY----- 140 (447)
T ss_pred cCCCCHHHHHHHHHHHHHhhcccCC---cccchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHH-HHHHH-----
Confidence 4677788999999998876421111 22236677788888888876435788999999999999998 55544
Q ss_pred CCCCEEEEeCCcchhHHHHHHHHHHhc----------CcEEEEEeCCCCCCC--------hHHH-HHHHHHHHhccccCC
Q 012991 128 HRNDTVLMLHCAFQAVKKSIQAYVTRA----------GGSVVEVQLPFPLAS--------EEEI-INEFKKGIEKGKKDG 188 (452)
Q Consensus 128 ~~g~~Vl~~~~~~~s~~~~~~~~a~~~----------g~~v~~~~~~~~~~~--------~~~~-~~~l~~~i~~~~~~~ 188 (452)
..+..||....+||+.......+.... ...+..+|.+.+... .... .+.++..+.......
T Consensus 141 Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~ 220 (447)
T COG0160 141 TGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGP 220 (447)
T ss_pred hCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCC
Confidence 446789999888888665544331111 123566665432221 1233 666777666555556
Q ss_pred CceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEeccccc-CCc----cccccccCccEEEEcCcccCcCCC
Q 012991 189 KMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHAM-GSI----KIDVKEIGADFYVSNLHKWFFCPP 259 (452)
Q Consensus 189 ~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~~-g~~----~~~~~~~~~d~~~~s~~K~l~g~~ 259 (452)
.++++|+++.+....|.+.| ++++.++|++||+ ++|+|++|+. |-. .+......+|+++++ |.+.++.
T Consensus 221 ~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gi-llI~DEVQtG~GRTG~~fa~E~~gv~PDivt~a--K~ig~G~ 297 (447)
T COG0160 221 EEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGI-LLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLA--KSLGGGL 297 (447)
T ss_pred CceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCC-EEEEeccccCCCccccchhhhhcCCCCCEEEec--ccccCCC
Confidence 78999999999999999876 7789999999999 8999999863 222 122223358999988 9888766
Q ss_pred CcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHH
Q 012991 260 SVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLA 339 (452)
Q Consensus 260 G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~ 339 (452)
.+|.++.++++... .+-. ...++.|+ ..++.+++..++.+ ..+.+.++..++.+++++.|.
T Consensus 298 Pl~avv~r~ei~~~---~~g~---------~~~Tf~GN-----pva~Aaa~AvL~vi--e~e~L~~~a~~~G~~l~~~L~ 358 (447)
T COG0160 298 PLSAVVGRAEIMDW---PPGG---------HGGTFGGN-----PVACAAALAVLDVI--EEENLLERAAELGEYLRDRLE 358 (447)
T ss_pred ceeEEeccHHhccc---CCcc---------cCCCCCcC-----HHHHHHHHHHHHHH--HHccHHHHHHHHHHHHHHHHH
Confidence 68999999888774 2211 01111222 22334444444433 234789999999999999998
Q ss_pred HHcC-CCcCCCcccccceEEEEcCCc--cccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceE
Q 012991 340 NAWG-TSLGSPPEICAAMVMVGLPSR--LRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYA 416 (452)
Q Consensus 340 ~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i 416 (452)
++.. ...+......+.++.+.+-+. .+..+..-...+.+.+.++ |+.+-.. +...+.|
T Consensus 359 ~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~-Glil~~~------------------G~~~nvi 419 (447)
T COG0160 359 ELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFER-GLLLLTC------------------GPHGNVL 419 (447)
T ss_pred HHHhhcCceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHc-CCEEecc------------------CCCCcEE
Confidence 7643 344555544566666655311 1112223456788888775 9876422 2335899
Q ss_pred EecccccCCHHHHHHHHHHHHHHHhc
Q 012991 417 RISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 417 Ris~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
||.+....++++++..+++|.+.+++
T Consensus 420 Ri~PPL~is~e~~d~~l~il~~al~~ 445 (447)
T COG0160 420 RILPPLTISDEELDEGLDILEEALKE 445 (447)
T ss_pred EEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 99999989999999999999998865
No 266
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.86 E-value=5e-20 Score=180.09 Aligned_cols=317 Identities=18% Similarity=0.197 Sum_probs=201.0
Q ss_pred HHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEE
Q 012991 80 KGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVV 159 (452)
Q Consensus 80 ~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~ 159 (452)
...+++++.+++++|.+ .++.++|||.|+.+++.++ .+++||+|+++..+|.+...++.. .|.+++
T Consensus 25 ~~~~~fE~~~a~~~g~~---~~~~~~sgt~Al~~al~~l-------~~~~gdeVi~p~~t~~~~~~ai~~----~G~~pv 90 (363)
T PF01041_consen 25 PYVEEFEKEFAEYFGVK---YAVAVSSGTSALHLALRAL-------GLGPGDEVIVPAYTFPATASAILW----AGAEPV 90 (363)
T ss_dssp HHHHHHHHHHHHHHTSS---EEEEESSHHHHHHHHHHHT-------TGGTTSEEEEESSS-THHHHHHHH----TT-EEE
T ss_pred HHHHHHHHHHHHHhCCC---eEEEeCChhHHHHHHHHhc-------CCCcCceEecCCCcchHHHHHHHH----hccEEE
Confidence 45899999999999984 8999999999999999998 468999999999999999888765 599999
Q ss_pred EEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCcccc
Q 012991 160 EVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKID 238 (452)
Q Consensus 160 ~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~ 238 (452)
+++++ . +...+ ++.+++.+ ++++++|+++|.. |...++++|.++|+++|+ ++|.|+||+.|...-+
T Consensus 91 ~~Di~--~-~~~~id~~~~~~~i------~~~t~ai~~~h~~---G~~~d~~~i~~~~~~~~i-~lIeD~a~a~g~~~~g 157 (363)
T PF01041_consen 91 FVDID--P-ETLNIDPEALEKAI------TPKTKAILVVHLF---GNPADMDAIRAIARKHGI-PLIEDAAQAFGARYKG 157 (363)
T ss_dssp EE-BE--T-TTSSB-HHHHHHHH------HTTEEEEEEE-GG---GB---HHHHHHHHHHTT--EEEEE-TTTTT-EETT
T ss_pred EEecc--C-CcCCcCHHHHHHHh------ccCccEEEEecCC---CCcccHHHHHHHHHHcCC-cEEEccccccCceeCC
Confidence 99653 1 33444 89999999 6889999998875 889999999999999999 8999999999875332
Q ss_pred --ccccCccEEEEcCc--ccCcCCCCcEEEEEecCccccCCCCCceeccCCCC----ccccccc-ccccCccccccHHHH
Q 012991 239 --VKEIGADFYVSNLH--KWFFCPPSVAFLYCRKSILSSDMHHPVVSHEFGNG----LPIESAW-IGTRDYSAQLVIPSA 309 (452)
Q Consensus 239 --~~~~~~d~~~~s~~--K~l~g~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~a 309 (452)
.-.. .|+.++|++ |.+.++.| |+++++++.+..++ ..+. ++|.. ....... .|...-.+-+....+
T Consensus 158 ~~~G~~-gd~~~fSf~~~K~i~~geG-G~v~~~~~~~~~~~-~~~~--~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAig 232 (363)
T PF01041_consen 158 RPVGSF-GDIAIFSFHPTKIITTGEG-GAVVTNDPELAERA-RALR--NHGRSRDAFRRYRHELPPGYNFRMSELQAAIG 232 (363)
T ss_dssp EETTSS-SSEEEEESSTTSSS-SSS--EEEEESTHHHHHHH-HHHT--BTTEETSECSTTEESSSS--B-B-BHHHHHHH
T ss_pred EeccCC-CCceEecCCCCCCCcCCCC-eeEEecHHHHHHHh-hhhh--ccCcCccccccccccccCCcccccHHHHHHHH
Confidence 1122 488888875 98766666 88888865544301 1110 01110 0000000 121122222222233
Q ss_pred HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcC-CCcc---cccceEEEEcCCccccCChhhHHHHHHHHhhhcc
Q 012991 310 VTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLG-SPPE---ICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFG 385 (452)
Q Consensus 310 l~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 385 (452)
+..+. -++...++-+++.+.+.+.|...+++... .++. .....+.+.+++. ...+.+++.+.|.++ |
T Consensus 233 l~QL~----~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~----~~~~rd~l~~~L~~~-G 303 (363)
T PF01041_consen 233 LAQLK----RLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDE----ALADRDELVEALRAR-G 303 (363)
T ss_dssp HHHHH----THHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCC----GCSTHHHHHHHHHHT-T
T ss_pred HHHHH----HhhhhHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccccc----ccchHHHHHHHHHHC-C
Confidence 44444 46777777889999999999988776332 2222 1233444555421 013577899999876 9
Q ss_pred eEeeeccc-CCCCCCCCCCC-------CCCCCCCccceEEecccccCCHHHHHHHHHHHH
Q 012991 386 VEVPIHYQ-APKDDGQPQAG-------ARDKDGIITGYARISHQVYNTLEDYEKFRDAVI 437 (452)
Q Consensus 386 I~v~~~~~-~~~~~~~~~~~-------~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~ 437 (452)
|.....+. +.+.-...... +-.+.......|.+.++...+.+|+++++++|+
T Consensus 304 I~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 304 IETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp BEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred CcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 99976652 21100000000 000001224468888888889999999999885
No 267
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.86 E-value=8.1e-19 Score=174.20 Aligned_cols=339 Identities=12% Similarity=0.144 Sum_probs=206.5
Q ss_pred CCCCeEEeccC----CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHH
Q 012991 36 HQHGVARINNG----SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAA 111 (452)
Q Consensus 36 ~~~~~~~l~~~----~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~ 111 (452)
.+...+.+..+ ..++..+.+.+++.+.+.... .... ....+...++.++++++.+. +++++++||++|+
T Consensus 37 dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~---~~~~~~~~~la~~l~~~~~~---~~v~~~~gg~eA~ 109 (396)
T PRK02627 37 DGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLI-HTSN---LYYIEPQEELAEKLVELSGM---DKVFFCNSGAEAN 109 (396)
T ss_pred CCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhcc-cccc---ccCCHHHHHHHHHHHhhcCC---CEEEECCCcHHHH
Confidence 34455555432 235555669999988776431 1111 11356677888889888765 6999999999999
Q ss_pred HHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCCh-----HHHHHHHHHHHhcccc
Q 012991 112 AIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASE-----EEIINEFKKGIEKGKK 186 (452)
Q Consensus 112 ~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~-----~~~~~~l~~~i~~~~~ 186 (452)
..++.++. .+......+.++|++..+.|++.......+ .+......... +.... ...++++++.+
T Consensus 110 ~~al~~a~-~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~d~~~l~~~i----- 179 (396)
T PRK02627 110 EAAIKLAR-KYGHKKGIEKPEIITAENSFHGRTLATLSA---TGQPKYQEGFE-PLVEGFIYVPFNDIEALKAAI----- 179 (396)
T ss_pred HHHHHHHH-HHhcccCCCCCeEEEECCCcCcccHHHHHh---cCCccccccCC-CCCCCceEeCCCCHHHHHHhc-----
Confidence 99999653 221100112378999988887643332221 12111100000 10000 00268888888
Q ss_pred CCCceEEEEEeccCCCCcc-ccc---HHHHHHHHHHcCCCEEEEecccc-cCCc----cccccccCccEEEEcCcccCcC
Q 012991 187 DGKMIRLAIIDHITSMPCV-VIP---VRKLVKICRDEGVDQVFVDAAHA-MGSI----KIDVKEIGADFYVSNLHKWFFC 257 (452)
Q Consensus 187 ~~~~~~lv~~~~~~n~tG~-~~~---l~~i~~l~~~~~~~~~ivD~a~~-~g~~----~~~~~~~~~d~~~~s~~K~l~g 257 (452)
++++++|+++.+++++|. ..| +++|.++|++||+ ++|+|++++ ++.. ..+.....+|+++ ++|.+.+
T Consensus 180 -~~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~-~lI~DE~~~g~g~~g~~~~~~~~~~~pdi~t--~sK~~~~ 255 (396)
T PRK02627 180 -TDKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGI-LLILDEVQTGMGRTGKLFAYQHYGIEPDIMT--LAKGLGG 255 (396)
T ss_pred -CCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCC-EEEEechhcCCCccCceeeehhcCCCCCEEE--EcchhhC
Confidence 578999999999999994 443 7899999999999 899999987 3321 1122233467665 5698654
Q ss_pred CCCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Q 012991 258 PPSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARM 337 (452)
Q Consensus 258 ~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~ 337 (452)
+..+|++++++++.+. + .... ... +...+...+.+..++++.+.+ +.+.++.+++.+++.+.
T Consensus 256 G~rig~~~~~~~~~~~-~-~~~~---------~~~--t~~~~~~~~~aa~~~l~~~~~-----~~~~~~~~~~~~~~~~~ 317 (396)
T PRK02627 256 GVPIGAVLAKEKVADV-F-TPGD---------HGS--TFGGNPLACAAALAVIEIIEE-----EGLLENAAEVGEYLRAK 317 (396)
T ss_pred CcccEEEEEcHHHHhc-c-CCCC---------CCC--CCCCCHHHHHHHHHHHHHHhh-----ccHHHHHHHHHHHHHHH
Confidence 4448999988877664 2 1110 000 011222334444445554432 34566677777777777
Q ss_pred HHHHc-CCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceE
Q 012991 338 LANAW-GTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYA 416 (452)
Q Consensus 338 L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i 416 (452)
|.++. ...........+.++++.++ .+..++.+.|.++ ||.+... ..+++
T Consensus 318 l~~~~~~~~~~~~~~~~g~~~~i~~~--------~~~~~~~~~l~~~-Gv~v~~~--------------------~~~~l 368 (396)
T PRK02627 318 LRELLEKYPGIKEVRGLGLMIGIELD--------RPAAEIVKKALEK-GLLINVT--------------------GDNVL 368 (396)
T ss_pred HHHHHHhCCCeeeeccCcEEEEEEec--------CcHHHHHHHHHHC-CeEEeec--------------------CCCEE
Confidence 76642 12122122223567777663 2467888888776 9998532 13689
Q ss_pred EecccccCCHHHHHHHHHHHHHHHhc
Q 012991 417 RISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 417 Ris~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
|++++...+++++++++++|++++++
T Consensus 369 Ri~~~~~~~~~~i~~~~~~l~~~l~~ 394 (396)
T PRK02627 369 RLLPPLIISKEEIDEAVDRLEEVLKE 394 (396)
T ss_pred EEECCcccCHHHHHHHHHHHHHHHHh
Confidence 99998778999999999999998754
No 268
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.86 E-value=5.6e-19 Score=174.75 Aligned_cols=324 Identities=12% Similarity=0.083 Sum_probs=202.3
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|...+.+.+++.+.+......+ .. ...+...++.+++++..+. +++++++||++|+..++.++. .+.
T Consensus 44 ~lGh~~p~v~~a~~~~~~~~~~~~-~~---~~~~~~~~la~~l~~~~~~---~~v~~~~sGseA~~~al~~ar-~~~--- 112 (389)
T PRK01278 44 SLGHAHPHLVEALKEQAEKLWHVS-NL---YRIPEQERLAERLVENSFA---DKVFFTNSGAEAVECAIKTAR-RYH--- 112 (389)
T ss_pred cCCCCCHHHHHHHHHHHHhcCccc-cc---cCChHHHHHHHHHHhhCCC---CEEEEcCCcHHHHHHHHHHHH-HHH---
Confidence 356777889999999876531111 11 1234556788888887744 589999999999999998652 221
Q ss_pred CCCCC----EEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCCh---H--HHHHHHHHHHhccccCCCceEEEEEe
Q 012991 127 FHRND----TVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASE---E--EIINEFKKGIEKGKKDGKMIRLAIID 197 (452)
Q Consensus 127 ~~~g~----~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~---~--~~~~~l~~~i~~~~~~~~~~~lv~~~ 197 (452)
..+|+ +|++.++.|++....+... .+.. .......+...+ . ..++.+++.+ .+++++|+++
T Consensus 113 ~~~G~~~r~~vi~~~~~yhg~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~d~~~l~~~l------~~~~~avive 182 (389)
T PRK01278 113 YGKGHPERYRIITFEGAFHGRTLATIAA---GGQE-KYLEGFGPLVPGFDQVPFGDIEALKAAI------TPNTAAILIE 182 (389)
T ss_pred HhcCCCCCCEEEEECCCcCCCcHHHHhc---cCCh-hhcccCCCCCCCceEeCCCCHHHHHHhh------CCCeEEEEEe
Confidence 23443 8999999998876555332 1211 111000000000 0 0168888888 4689999999
Q ss_pred ccCCCCcccc----cHHHHHHHHHHcCCCEEEEecccc-cCCc----cccccccCccEEEEcCcccCcCCCCcEEEEEec
Q 012991 198 HITSMPCVVI----PVRKLVKICRDEGVDQVFVDAAHA-MGSI----KIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRK 268 (452)
Q Consensus 198 ~~~n~tG~~~----~l~~i~~l~~~~~~~~~ivD~a~~-~g~~----~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~ 268 (452)
.+++++|... .+++|.++|++||+ ++|+|++++ +|.. ..+.....+|++ +++|.+.++..+|++++++
T Consensus 183 p~~~~~G~~~~~~~~l~~l~~l~~~~g~-~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~ 259 (389)
T PRK01278 183 PIQGEGGIRPAPDEFLKGLRQLCDENGL-LLIFDEVQCGMGRTGKLFAHEWAGVTPDIM--AVAKGIGGGFPLGACLATE 259 (389)
T ss_pred cccCCCCCcCCCHHHHHHHHHHHHHcCC-EEEEeccccCCCcCCcceeecccCCCCCEE--EEehhccCCcceEEEEEcH
Confidence 9988888543 47899999999999 799999987 3221 112223346765 4569876443488988887
Q ss_pred CccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcC-CC-c
Q 012991 269 SILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWG-TS-L 346 (452)
Q Consensus 269 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~-~~-~ 346 (452)
++.+. + .... . . .+.+.+...+.+..++++.+.+ +.+.++.+++.+++.+.|.++.. .. +
T Consensus 260 ~~~~~-~-~~~~---~------~--~t~~~~~~~~aaa~a~l~~l~~-----~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 321 (389)
T PRK01278 260 EAAKG-M-TPGT---H------G--STYGGNPLAMAVGNAVLDVILA-----PGFLDNVQRMGLYLKQKLEGLVDRFPDV 321 (389)
T ss_pred HHHhc-c-CCCC---C------C--CCCCccHHHHHHHHHHHHHHhh-----hHHHHHHHHHHHHHHHHHHHHHhhCCCc
Confidence 77664 2 1110 0 0 0112233344444455666543 23455667777777777766421 11 2
Q ss_pred CCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCH
Q 012991 347 GSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTL 426 (452)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~ 426 (452)
.......+.++++.++ .+..++++.|.++ ||.+.++ ..+++|++++...++
T Consensus 322 ~~~v~g~G~~~~i~~~--------~~~~~~~~~l~~~-GV~~~p~--------------------~~~~lR~~p~~~~~~ 372 (389)
T PRK01278 322 IEEVRGKGLLLGLKCV--------VPNRDLVQALRDE-GLLTVGA--------------------GDNVVRLLPPLIITE 372 (389)
T ss_pred eeeEecccEEEEEEEe--------cCHHHHHHHHHHC-CeEEeec--------------------CCCEEEEeCCcccCH
Confidence 2222223456666553 1467888998876 9987432 236899999877899
Q ss_pred HHHHHHHHHHHHHHh
Q 012991 427 EDYEKFRDAVILLVE 441 (452)
Q Consensus 427 ~di~~l~~~l~~~~~ 441 (452)
+++++++++|+++++
T Consensus 373 ~~i~~~l~~l~~~l~ 387 (389)
T PRK01278 373 EEIDEALERLERAAE 387 (389)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998874
No 269
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.86 E-value=4.1e-19 Score=180.17 Aligned_cols=385 Identities=15% Similarity=0.034 Sum_probs=236.1
Q ss_pred EeccCCCCCCcHHHHHHHHHHHHHHhcCCch-hhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhc
Q 012991 42 RINNGSFGSCPKSVLADQQKWQLKFLQQPDD-FYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGR 120 (452)
Q Consensus 42 ~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~ 120 (452)
|+.+-..++.+++++..+..... +.+... -.+.....+.+++-+++++++|.+ ...-.||+|||.|+..++.+...
T Consensus 86 y~ghm~~~~~~paila~~~a~~~--N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~-~~~G~~TsGGT~ANl~aL~~AR~ 162 (608)
T TIGR03811 86 YWGHMNSETLMPAILAYNYAMLW--NGNNVAYESSPATSQMEEEVGKEFATLMGYK-NGWGHIVADGSLANLEGLWYARN 162 (608)
T ss_pred eEEECcCCCCHHHHHHHHHHHHh--CCCCCccccCchHHHHHHHHHHHHHHHhCCC-CCCeEEeCChHHHHHHHHHHHHH
Confidence 55555555666655554443332 222222 234566788899999999999997 45678999999999887775432
Q ss_pred ccccC----CC----------------------------------------CCC------CEEEEeCCcchhHHHHHHHH
Q 012991 121 GFTEG----RF----------------------------------------HRN------DTVLMLHCAFQAVKKSIQAY 150 (452)
Q Consensus 121 ~~~~~----~~----------------------------------------~~g------~~Vl~~~~~~~s~~~~~~~~ 150 (452)
..... .. .+| .+|+++...|.|..++...+
T Consensus 163 ~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~il 242 (608)
T TIGR03811 163 IKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADII 242 (608)
T ss_pred hhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHc
Confidence 11000 00 000 15788888899998887654
Q ss_pred HHhcCc---EEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHH---HHcCCC-
Q 012991 151 VTRAGG---SVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKIC---RDEGVD- 222 (452)
Q Consensus 151 a~~~g~---~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~---~~~~~~- 222 (452)
|+ .++.+ |.++++++ ++.|+++|++...++..+-+|+.+.+++.+|.+.|+++|+++| +++|+|
T Consensus 243 ----GlG~~~vv~V----pvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~ 314 (608)
T TIGR03811 243 ----GIGLDQVIPV----PVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYF 314 (608)
T ss_pred ----CCCcccEEEe----ecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCce
Confidence 77 57888 55667777 9999999976544455678899999999999999999999999 668873
Q ss_pred EEEEecccccCC--c---------ccc--------------------------cc-ccCccEEEEcCcccCcCCCCcEEE
Q 012991 223 QVFVDAAHAMGS--I---------KID--------------------------VK-EIGADFYVSNLHKWFFCPPSVAFL 264 (452)
Q Consensus 223 ~~ivD~a~~~g~--~---------~~~--------------------------~~-~~~~d~~~~s~~K~l~g~~G~G~l 264 (452)
++|||+|++... + |.+ +. --.+|.++.++|||++.|+++|++
T Consensus 315 ~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~l 394 (608)
T TIGR03811 315 YLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGI 394 (608)
T ss_pred eEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEE
Confidence 499999987532 1 110 00 126899999999999999999999
Q ss_pred EEecCcccc--CCCCCceeccCCCCc---ccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHH
Q 012991 265 YCRKSILSS--DMHHPVVSHEFGNGL---PIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLA 339 (452)
Q Consensus 265 ~~~~~~~~~--~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~ 339 (452)
++|+..+.. ....+|+... +... .......|+.+....++++.+++.+.--..|+.++.++..++++++.+.|.
T Consensus 395 l~Rd~~~~~~~~~~a~Yl~~~-~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~ 473 (608)
T TIGR03811 395 VIQDIRMRDVISYFATYVFEK-GADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLN 473 (608)
T ss_pred EEeCHHHHHHHhcCcchhccc-cccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998654322 1123333211 1111 111223355554556667777777621113899999999999999999998
Q ss_pred HH------cCCCc--CCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceE----------eeecccC-CCCCCC
Q 012991 340 NA------WGTSL--GSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVE----------VPIHYQA-PKDDGQ 400 (452)
Q Consensus 340 ~~------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~----------v~~~~~~-~~~~~~ 400 (452)
+. +.+++ ..++. .++++|.+... +..+-....++.+.+.++..+. +...... ...| +
T Consensus 474 ~~~~~~~~~~~el~~~~~pd--lniV~Fr~~~~-g~~~l~~~n~ln~~i~~~~~~~~g~~~~~~~~~s~t~~~~~~yg-~ 549 (608)
T TIGR03811 474 NLEFKVGDKEIEVHPLTKPD--FNMVDYVFNEK-GNDDLVKMNKLNHAFYDYASYVKGSIYNNEFITSHTDFAIPDYG-D 549 (608)
T ss_pred hcccccCCCCeeEEecCCCC--cceEEEEEecC-CCccHHHHHHHHHHHHHhhccccCCCCCcceEeeecccccchhh-h
Confidence 84 33444 44444 67888876311 0001112344555554443321 1111111 0001 1
Q ss_pred CCCCCCCCC---------CCccceEEeccc--ccCCHHHHHHHHHHHHHHHhc
Q 012991 401 PQAGARDKD---------GIITGYARISHQ--VYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 401 ~~~~~~~~~---------~~~~~~iRis~~--~~~t~~di~~l~~~l~~~~~~ 442 (452)
+.....++. ...-..+|.+++ +.++.+.++.+++.|++.+.+
T Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~~lr~~~m~p~~~~~~~~~~~~~~~~~~~~~ 602 (608)
T TIGR03811 550 SPFAFVNSLGFSDEEWQRAGKVTILRASVMTPYMNDKENFDEYAPKIKAAMQE 602 (608)
T ss_pred hHHHHHHHcCCChhhhccCCceEEEEEEecCcccCChhhHHHHHHHHHHHHHH
Confidence 110011111 122346899874 334556688888888888764
No 270
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.85 E-value=7e-21 Score=183.69 Aligned_cols=280 Identities=16% Similarity=0.239 Sum_probs=188.9
Q ss_pred hhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcC
Q 012991 76 NSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAG 155 (452)
Q Consensus 76 ~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g 155 (452)
..+...+.++++.+|+.||++ ...++++|+|.++..++.++ +++||+|++++.+|.|++.++.. .|
T Consensus 62 ~~p~G~I~eAe~~aA~~fGAd--~t~flvnGsT~g~~a~i~a~--------~~~gd~VLv~RN~HkSv~~alil----~g 127 (417)
T PF01276_consen 62 HDPEGIIKEAEELAARAFGAD--KTFFLVNGSTSGNQAMIMAL--------CRPGDKVLVDRNCHKSVYNALIL----SG 127 (417)
T ss_dssp TTTBTHHHHHHHHHHHHHTES--EEEEESSHHHHHHHHHHHHH--------TTTTCEEEEETT--HHHHHHHHH----HT
T ss_pred cCCccHHHHHHHHHHHhcCCC--eEEEEecCchHHHHHHHHHh--------cCCCCEEEEcCCcHHHHHHHHHH----cC
Confidence 445678999999999999996 77888899999999999988 58999999999999999988765 49
Q ss_pred cEEEEEeCCCCCCChH--------HH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEE
Q 012991 156 GSVVEVQLPFPLASEE--------EI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFV 226 (452)
Q Consensus 156 ~~v~~~~~~~~~~~~~--------~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~iv 226 (452)
++++++++.. ++.+ .+ .+.++++|++.+.. ..+++|++++|++ .|...++++|+++|+++++ +++|
T Consensus 128 a~Pvyi~p~~--~~~gi~~~i~~~~~~~~~i~~~l~~~p~~-k~~~~vvlt~PTY-~Gv~~di~~I~~~~h~~~~-~llv 202 (417)
T PF01276_consen 128 AIPVYIPPED--NEYGIIGGISPDEFNEEDIEEALKEHPDA-KAPRLVVLTSPTY-YGVCYDIKEIAEICHKHGI-PLLV 202 (417)
T ss_dssp EEEEEEEEEE---TTS-BEEB-GGGGSHHHHHHHHHHCTTC-HCESEEEEESS-T-TSEEE-HHHHHHHHCCTEC-EEEE
T ss_pred CeEEEecCCc--cccCCccCCChhhhhHHHHHHHHHhCccc-cCceEEEEeCCCC-CeEEECHHHHHHHhcccCC-EEEE
Confidence 9999997531 1111 12 38899999874321 1256699999876 7999999999999999999 8999
Q ss_pred ecccccC----CccccccccCcc-------EEEEcCcccCcCCCCcEEEEEecCc-ccc-CCCCCceeccCCCCcccccc
Q 012991 227 DAAHAMG----SIKIDVKEIGAD-------FYVSNLHKWFFCPPSVAFLYCRKSI-LSS-DMHHPVVSHEFGNGLPIESA 293 (452)
Q Consensus 227 D~a~~~g----~~~~~~~~~~~d-------~~~~s~~K~l~g~~G~G~l~~~~~~-~~~-~l~~~~~~~~~~~~~~~~~~ 293 (452)
|+||+.= ..+.+....++| +++.|.||.+.+....+++.++.+. +.. ++... ....
T Consensus 203 DEAhGah~~F~~lp~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~-----------l~~~ 271 (417)
T PF01276_consen 203 DEAHGAHFGFHPLPRSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEA-----------LSMH 271 (417)
T ss_dssp E-TT-TTGGCSGGGTTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHH-----------HHHH
T ss_pred EccccccccCCCCccchhhccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHH-----------HHHH
Confidence 9998641 223344556889 9999999999999999999998876 432 01000 1223
Q ss_pred cccccCccccccHHHHHHHH-HHhhcCHHHHHHHHHHHHHHHHHHHH---HHcCCCcCCCccc--cc-------------
Q 012991 294 WIGTRDYSAQLVIPSAVTFV-SRFEGGIDGIMQRNHEQALKMARMLA---NAWGTSLGSPPEI--CA------------- 354 (452)
Q Consensus 294 ~~~~~~~~~~~~~~~al~~~-~~~~~g~~~~~~~~~~~~~~l~~~L~---~~~~~~~~~~~~~--~~------------- 354 (452)
.+.+|++..+.++..+.+++ ... | +.+.++..+++..+++.|. +.+++++..++.- ..
T Consensus 272 ~TTSPSY~lmASlD~a~~~m~~~~--G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf 348 (417)
T PF01276_consen 272 QTTSPSYPLMASLDVARAQMEEEE--G-RELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGENWHGF 348 (417)
T ss_dssp S-SS--HHHHHHHHHHHHHHSHHH--H-HHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-TTT--
T ss_pred cCCChHHHHHHHHHHHHHHHhhhh--h-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccccchhc
Confidence 45789999999999998888 432 4 4566667788888888884 4455555554320 00
Q ss_pred -----ce-------EEEEcCCcc--c--cCChhhHHHHHHHHhhhcceEee
Q 012991 355 -----AM-------VMVGLPSRL--R--VMGEDDALRLRGHLRVRFGVEVP 389 (452)
Q Consensus 355 -----~~-------~~~~~~~~~--~--~~~~~~~~~l~~~L~~~~gI~v~ 389 (452)
.+ +.+..|... + .+.+.++..+.+.|+++ ||.+.
T Consensus 349 ~~~~~~~~~lDP~K~ti~~pG~~~~g~~~~~Gi~g~~~~~~L~~~-~I~~E 398 (417)
T PF01276_consen 349 EGLADDYYMLDPTKLTINTPGIDADGELSELGIPGYIVEKYLREH-GIQVE 398 (417)
T ss_dssp TT--TTSEEE-TTEEEEE-STBETTSSB-SS---HHHHHHHHHHT-TEE-S
T ss_pred hhcccCccccCCcEEEEEccCcCcCCcccccCCCHHHHHHHHHHc-CCEEE
Confidence 01 122222100 0 12367888899999875 99984
No 271
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.85 E-value=9.8e-19 Score=172.35 Aligned_cols=328 Identities=11% Similarity=0.106 Sum_probs=202.0
Q ss_pred CCCCeEEeccC----CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHH
Q 012991 36 HQHGVARINNG----SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAA 111 (452)
Q Consensus 36 ~~~~~~~l~~~----~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~ 111 (452)
.++.++.+..+ ..|..++.+.+++.+.+..... .+. ....+...++.+.+++..+. +.+++++||++|+
T Consensus 27 ~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~---~~~~~~~~~la~~l~~~~~~---~~~~~~~sG~~a~ 99 (377)
T PRK02936 27 NGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWH-VSN---LFTNSLQEEVASLLAENSAG---DLVFFCNSGAEAN 99 (377)
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccc-ccc---ccCCHHHHHHHHHHHhcCCC---CEEEEeCCcHHHH
Confidence 34555555444 4567788899999998865311 111 11134455555666655443 5899999999999
Q ss_pred HHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCc---------EEEEEeCCCCCCChHHHHHHHHHHHh
Q 012991 112 AIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGG---------SVVEVQLPFPLASEEEIINEFKKGIE 182 (452)
Q Consensus 112 ~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~---------~v~~~~~~~~~~~~~~~~~~l~~~i~ 182 (452)
..++... +. ...+++|++.++.|++.......+...... .+..+ +.++ .+.+++.+
T Consensus 100 ~~A~~~a-~~-----~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~d----~~~l~~~~- 164 (377)
T PRK02936 100 EAALKLA-RK-----HTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHV----PFND----IKALKEVM- 164 (377)
T ss_pred HHHHHHH-HH-----hcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEe----CCCC----HHHHHHhc-
Confidence 9999843 22 134467888888777543333221110000 11122 2121 57888888
Q ss_pred ccccCCCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCc--ccc--ccccCccEEEEcCcc
Q 012991 183 KGKKDGKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSI--KID--VKEIGADFYVSNLHK 253 (452)
Q Consensus 183 ~~~~~~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~--~~~--~~~~~~d~~~~s~~K 253 (452)
.+++++|+++.++++.|...+ +++|.++|++||+ ++|+|++|+ +|.. .+. .....+|++ +++|
T Consensus 165 -----~~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~-~lI~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK 236 (377)
T PRK02936 165 -----NEEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGA-LLIIDEVQTGIGRTGTLFAYEQFGLDPDIV--TVAK 236 (377)
T ss_pred -----cCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCC-EEEEeccccCCCcCchhhHHHhhCCCCcEE--EEcc
Confidence 467899999999998887743 8899999999999 899999985 2221 111 112346765 4679
Q ss_pred cCcCCCCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Q 012991 254 WFFCPPSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALK 333 (452)
Q Consensus 254 ~l~g~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~ 333 (452)
.+.+..-+|+++.++++.+. + .... ... +...+...+.+..++++.+.. +...++++++.++
T Consensus 237 ~l~~G~~ig~v~~~~~~~~~-~-~~~~---------~~~--t~~~~~~~~aaa~a~l~~~~~-----~~~~~~~~~~~~~ 298 (377)
T PRK02936 237 GLGNGIPVGAMIGKKELGTA-F-GPGS---------HGS--TFGGNPLAMAAAKEVLQVIKQ-----PSFLEEVQEKGEY 298 (377)
T ss_pred cccCCCccEEEEEcHHHHhh-c-cCCC---------CCC--CCCCCHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHH
Confidence 86543237888888777664 2 1110 000 112333344455555555432 3445677788888
Q ss_pred HHHHHHHH-cCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCc
Q 012991 334 MARMLANA-WGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGII 412 (452)
Q Consensus 334 l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~ 412 (452)
+++.|.+. .++.........+.++++.+++ +...+.+.|.+ .||.+.. ..
T Consensus 299 l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~--------~~~~~~~~l~~-~gv~v~~--------------------~g 349 (377)
T PRK02936 299 FLQKLQEELEHLECVKNIRGKGLMIGIECTE--------EVAPVIEQLRE-EGLLVLS--------------------AG 349 (377)
T ss_pred HHHHHHHHHhhCCcEEeEeecceEEEEEecc--------hHHHHHHHHHH-CCeEEec--------------------CC
Confidence 88888763 2333222211235678887751 25678888866 4998842 12
Q ss_pred cceEEecccccCCHHHHHHHHHHHHHHH
Q 012991 413 TGYARISHQVYNTLEDYEKFRDAVILLV 440 (452)
Q Consensus 413 ~~~iRis~~~~~t~~di~~l~~~l~~~~ 440 (452)
.+++|++++...+++++++++++|++++
T Consensus 350 ~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 350 PNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred CCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 3689999988889999999999998753
No 272
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.85 E-value=9.9e-19 Score=173.88 Aligned_cols=327 Identities=11% Similarity=0.114 Sum_probs=206.0
Q ss_pred HHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcc-cccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEE
Q 012991 81 GILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRG-FTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVV 159 (452)
Q Consensus 81 ~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~-~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~ 159 (452)
...++++.++++++.+ .+++++|||+|+.+++.++.+. +.+..+++||+|+++.++|.+...++.. .|.+++
T Consensus 64 ~~~~fe~~lA~~~g~~---~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~----~G~~pv 136 (438)
T PRK15407 64 FNDAFEKKLAEFLGVR---YALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQ----NGLVPV 136 (438)
T ss_pred hHHHHHHHHHHHhCCC---eEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHH----cCCEEE
Confidence 3678999999999984 6899999999999999876421 1111358899999999999998777654 599999
Q ss_pred EEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCcccc
Q 012991 160 EVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKID 238 (452)
Q Consensus 160 ~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~ 238 (452)
.++++. ....+ ++.+++.+ ++++++|+++|+ .|...++++|.++|+++|+ ++|+|++|+.|...-+
T Consensus 137 ~vdvd~---~~~~id~~~le~~i------~~~tkaVi~~~~---~G~p~dl~~I~~la~~~gi-~vIeDaa~a~G~~~~g 203 (438)
T PRK15407 137 FVDVEL---PTYNIDASLLEAAV------SPKTKAIMIAHT---LGNPFDLAAVKAFCDKHNL-WLIEDNCDALGSTYDG 203 (438)
T ss_pred EEecCC---CcCCcCHHHHHHHc------CcCCeEEEEeCC---CCChhhHHHHHHHHHHCCC-EEEEECccchhhhcCC
Confidence 986531 22334 88999988 678999999874 6888899999999999999 8999999999986543
Q ss_pred --ccccCccEEEEcCc--ccCcCCCCcEEEEEecCccccCCCCCceeccCCCC---------------------ccc--c
Q 012991 239 --VKEIGADFYVSNLH--KWFFCPPSVAFLYCRKSILSSDMHHPVVSHEFGNG---------------------LPI--E 291 (452)
Q Consensus 239 --~~~~~~d~~~~s~~--K~l~g~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~---------------------~~~--~ 291 (452)
...++ |+.++|++ |.+..+.| |+++++++.+.. ....+. ++|.. .+. .
T Consensus 204 ~~~G~~g-d~~~fSf~~~k~~~~geG-G~l~t~d~~l~~-~~~~~~--~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (438)
T PRK15407 204 RMTGTFG-DIATLSFYPAHHITMGEG-GAVFTNDPLLKK-IIESFR--DWGRDCWCAPGCDNTCGKRFGWQLGELPFGYD 278 (438)
T ss_pred eeeeccC-ceEEEeCCCCCCccccCc-eEEEECCHHHHH-HHHHHH--HhCccccccccccccccccccccccccccccc
Confidence 22333 77777765 65666666 899988766654 111110 01110 000 0
Q ss_pred ----cccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcC-CCcCCC-ccccc--ceEEEEcCC
Q 012991 292 ----SAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWG-TSLGSP-PEICA--AMVMVGLPS 363 (452)
Q Consensus 292 ----~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~-~~~~~--~~~~~~~~~ 363 (452)
....|...-.+-+....++..+. .++.+.++-+++++++.+.|..+++ +.+... +.... ..+.+.+++
T Consensus 279 ~~~~~~~~G~n~rmsel~AAig~~qL~----~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 354 (438)
T PRK15407 279 HKYTYSHLGYNLKITDMQAAIGLAQLE----KLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKE 354 (438)
T ss_pred ccccccccccccCccHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECC
Confidence 00112222222222333344444 3566777778888888888987654 333222 22112 223333331
Q ss_pred ccccCChhhHHHHHHHHhhhcceEeeeccc-CCCCCCCCCC-CC--CCCC----CCccceEEecccccCCHHHHHHHHHH
Q 012991 364 RLRVMGEDDALRLRGHLRVRFGVEVPIHYQ-APKDDGQPQA-GA--RDKD----GIITGYARISHQVYNTLEDYEKFRDA 435 (452)
Q Consensus 364 ~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~-~~~~~~~~~~-~~--~~~~----~~~~~~iRis~~~~~t~~di~~l~~~ 435 (452)
. .+.+.+++.+.|.++ ||..+..+. +.+.-..... .. ...+ ......|-+.++..-|++|+++++++
T Consensus 355 ~----~~~~Rd~l~~~L~~~-GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~ 429 (438)
T PRK15407 355 D----AGFTRVELVKYLEEN-KIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEK 429 (438)
T ss_pred c----CCCCHHHHHHHHHHC-CCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHH
Confidence 0 134567899999775 998765443 2111000000 00 0000 01234566666666689999999999
Q ss_pred HHHHHh
Q 012991 436 VILLVE 441 (452)
Q Consensus 436 l~~~~~ 441 (452)
|+++++
T Consensus 430 i~~~~~ 435 (438)
T PRK15407 430 IEEFFG 435 (438)
T ss_pred HHHHHh
Confidence 999875
No 273
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.85 E-value=3e-19 Score=175.34 Aligned_cols=316 Identities=17% Similarity=0.176 Sum_probs=198.9
Q ss_pred hhHHHHHHHHHHHhHhCCCCCCcEEEecChh-HHHHHHHHHhhcccccCCCC-CCCEEEEeCCcchhHHHHHHHHHHhcC
Q 012991 78 LRKGILESRAAVKDLINADDVGEISLVDNAT-TAAAIVLQQIGRGFTEGRFH-RNDTVLMLHCAFQAVKKSIQAYVTRAG 155 (452)
Q Consensus 78 ~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t-~a~~~~~~~l~~~~~~~~~~-~g~~Vl~~~~~~~s~~~~~~~~a~~~g 155 (452)
...+..++++.+++++|++.....++++|+| .++.+++.++. ... ++++|+++..+|.|..+++.. .|
T Consensus 103 ~~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr------~~~~~gd~VI~p~~th~S~~kAi~~----~G 172 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALR------HKRPKAKYVIWPRIDQKSCIKAIST----AG 172 (444)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcC------CcCCCCCEEEEECcChHHHHHHHHH----cC
Confidence 3567888999999999996445688999999 68888887662 112 589999999999999888765 59
Q ss_pred cEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccC-CCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 156 GSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHIT-SMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 156 ~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~-n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
++++.+++..+ ++...+ +++++++|+.. +.+..++++..++ +..|...|+++|+++|++||+ ++|+|+||+.+
T Consensus 173 ~~pv~Vd~~~d-~~~~~iD~e~Le~aIt~~---~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI-~lIvDaAyg~~ 247 (444)
T TIGR03531 173 FEPRVIETVLD-GDELTTDVEDIERAIEEI---GPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDI-PHIVNNAYGLQ 247 (444)
T ss_pred CeEEEeeeeec-CcCCCcCHHHHHHHHHhc---cCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCC-EEEEECcCcCc
Confidence 99999964111 223445 89999999632 2244555554443 445688999999999999999 69999999976
Q ss_pred Cccc-----ccccc-CccEEEEcCcccCcCCCCcEEEEEe-cCccccCCCCCceeccCCCCcccccccccccCccccccH
Q 012991 234 SIKI-----DVKEI-GADFYVSNLHKWFFCPPSVAFLYCR-KSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVI 306 (452)
Q Consensus 234 ~~~~-----~~~~~-~~d~~~~s~~K~l~g~~G~G~l~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (452)
.... .-... .+|++++|+||++..|.+.|+++++ +++++. +... +.+. ..+... ..+
T Consensus 248 ~~~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~-i~~~-----y~g~---------~~~s~~-~~~ 311 (444)
T TIGR03531 248 SNKYMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQE-ISKS-----YPGR---------ASASPS-LDV 311 (444)
T ss_pred ChhhhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHH-HHHh-----ccCC---------CCChHH-HHH
Confidence 5321 11112 3799999999997777766777674 444443 2111 1110 011111 222
Q ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHc---CCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhh
Q 012991 307 PSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAW---GTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVR 383 (452)
Q Consensus 307 ~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 383 (452)
+..+..+.. .|++++.++..++++++.+.|.++. |.++...+.+ ..-+.+.+... .+.+...+-..|..+
T Consensus 312 ~~~ll~~G~--~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n-~is~~~~~~~~----~~~~~~~~g~~l~~~ 384 (444)
T TIGR03531 312 LITLLSLGS--KGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPEN-PISSAMTLSTL----KGKDPTMLGSMLYSR 384 (444)
T ss_pred HHHHHHhCH--HHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCC-ceeEEEecccc----cccCHHHHHHHHHhC
Confidence 222222222 2788888888899999999987753 4444433321 12233444210 133567787788654
Q ss_pred cceEeee-----------cccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHH
Q 012991 384 FGVEVPI-----------HYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILL 439 (452)
Q Consensus 384 ~gI~v~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~ 439 (452)
+|--+. ++.+.+-|.++. .....++-++.....+.+||+.+++.|+++
T Consensus 385 -~v~g~r~v~~~~~~~~~~~~~~~~~~~~~-------~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 385 -RVTGPRVVTNGDSKTVGGCEFKGYGSHTS-------NYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred -CCCCceeecCCCceEECCEEeeccccccc-------CCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 553211 111111111111 123347777777778999999999999875
No 274
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.85 E-value=1.5e-19 Score=176.04 Aligned_cols=307 Identities=14% Similarity=0.173 Sum_probs=198.1
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|++...+..+++++.++++.|.+ ..+.+++|+.|+.+++.++ +++||+|+++...|......+......
T Consensus 58 Y~r~~~P~~~~lE~~la~leg~~---~av~~sSG~aAi~~al~al--------l~~GD~Vl~~~~~yg~t~~~~~~~~~~ 126 (384)
T PRK06434 58 YTRWGNPTVQAFEEKYAVLENAE---HALSFSSGMGAITSAILSL--------IKKGKRILSISDLYGQTFYFFNKVLKT 126 (384)
T ss_pred eeCCCChhHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHH--------hCCCCEEEEecCccchHHHHHHHHHHh
Confidence 55556677899999999999984 6788899999999999876 589999999888777766666555677
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|++++++++ ++. +.++ ++ .+++++|++++++||++.+.|+++|.++|+++++ +||++++.+
T Consensus 127 ~Gi~v~fvd~----~~~----~~~~--l~-----~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~l---vVD~t~~s~ 188 (384)
T PRK06434 127 LGIHVDYIDT----DRL----NSLD--FD-----PSNYDLIYAESITNPTLKVPDIKNVSSFCHENDV---IVDATFASP 188 (384)
T ss_pred cCcEEEEECC----CCh----hhee--ec-----CCCeeEEEEEcCCCCCceeecHHHHHHHHHHcCe---EEECCCCCc
Confidence 8999999954 221 1222 31 3479999999999999999999999999999976 459998765
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHH
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVT 311 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 311 (452)
...-.+ ..++|++++|.+|++.|+.+ .|+++.+++.+...+. .....+ |.... . +.+++-
T Consensus 189 ~~~~pl-~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~--~~~~~~-----------G~~~~-~---~~A~l~ 250 (384)
T PRK06434 189 YNQNPL-DLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLV--ERRKTL-----------GSNPD-P---IQAYLA 250 (384)
T ss_pred ccCCch-hcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHH--HHHHhc-----------CCCCC-H---HHHHHH
Confidence 542222 35799999999999877553 4666665443322011 000011 11110 1 122221
Q ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc--------ccccceEEEEcCCccccCChhhHHHHHHHHhh
Q 012991 312 FVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP--------EICAAMVMVGLPSRLRVMGEDDALRLRGHLRV 382 (452)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 382 (452)
... -..++...++..+++..+.+.|...|.++ |..|. ...++++.|.++ +...+.++.+.|.
T Consensus 251 ~~g--L~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~------~~~~~~~f~~~l~- 321 (384)
T PRK06434 251 LRG--LKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELR------SMEDVHKFIRNLE- 321 (384)
T ss_pred HhC--CCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEEC------CHHHHHHHHHhCC-
Confidence 111 12466677788899999999999988763 54442 135889999885 2334556666663
Q ss_pred hcceEeeecccC-----CCCCCCCCCCC--CCCCCCccceEEecccccCCHHHHHHHHHHHHHHH
Q 012991 383 RFGVEVPIHYQA-----PKDDGQPQAGA--RDKDGIITGYARISHQVYNTLEDYEKFRDAVILLV 440 (452)
Q Consensus 383 ~~gI~v~~~~~~-----~~~~~~~~~~~--~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~ 440 (452)
-+.+.+..+... +....+..... +...+..++.||+|++. ||++.+++.|++.+
T Consensus 322 l~~~~~slG~~~sl~~~p~~~~h~~~~~e~~~~~gi~~~liRlsvGl----Ed~~dLi~dl~~Al 382 (384)
T PRK06434 322 IPMVAASLGGVESLITLPVETSHSSLSPEERERLGISDNLVRFSIGI----EDIDDLIKDIENAL 382 (384)
T ss_pred cceEccCCCCCCeeeECCCccccccCCHHHHHhcCCCcCeEEEEeCc----CCHHHHHHHHHHHh
Confidence 233433322110 00000000000 11235567899999984 56667777776665
No 275
>PRK15029 arginine decarboxylase; Provisional
Probab=99.85 E-value=1.7e-19 Score=186.22 Aligned_cols=238 Identities=13% Similarity=0.136 Sum_probs=177.1
Q ss_pred hhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcC
Q 012991 76 NSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAG 155 (452)
Q Consensus 76 ~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g 155 (452)
..+...+.++++..|+.||++ ...++|+|+|.++.+++.++ +++||+|++++.+|.|++.++.. .|
T Consensus 201 ~~p~G~I~eAq~~aA~~fgA~--~t~FlvNGST~gn~a~i~a~--------~~~gd~Vlv~RN~HKSv~~al~L----~g 266 (755)
T PRK15029 201 LDHTGAFGESEKYAARVFGAD--RSWSVVVGTSGSNRTIMQAC--------MTDNDVVVVDRNCHKSIEQGLIL----TG 266 (755)
T ss_pred CCCCcHHHHHHHHHHHHhCCC--cEEEEeCChhHHHHHHHHHh--------cCCCCEEEeecccHHHHHHHHHH----cC
Confidence 344567899999999999996 78889999999999999976 59999999999999999988755 59
Q ss_pred cEEEEEeCCCCCCChH--------HH-HHHHHHHHhcccc----CCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCC
Q 012991 156 GSVVEVQLPFPLASEE--------EI-INEFKKGIEKGKK----DGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVD 222 (452)
Q Consensus 156 ~~v~~~~~~~~~~~~~--------~~-~~~l~~~i~~~~~----~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~ 222 (452)
+.++++.+.. +..+ .+ ++.+++++++.+. .+.+++++++++|++ .|...++++|+++|+++++
T Consensus 267 a~Pvyl~P~~--~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~di~~I~~~~h~~~~- 342 (755)
T PRK15029 267 AKPVYMVPSR--NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYNAKEAQDLLEKTSD- 342 (755)
T ss_pred CeEEEecccc--cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeCHHHHHHHHHhcCC-
Confidence 9999997532 1111 12 6788888876431 124566999999876 7999999999999999999
Q ss_pred EEEEeccccc-----CCccc-c-c-----cccCcc-EEEEcCcccCcCCCCcEEEEEecC--ccccCCCCCceeccCCCC
Q 012991 223 QVFVDAAHAM-----GSIKI-D-V-----KEIGAD-FYVSNLHKWFFCPPSVAFLYCRKS--ILSSDMHHPVVSHEFGNG 287 (452)
Q Consensus 223 ~~ivD~a~~~-----g~~~~-~-~-----~~~~~d-~~~~s~~K~l~g~~G~G~l~~~~~--~~~~~l~~~~~~~~~~~~ 287 (452)
+++||+||+. ...+. . + ...|+| +++.|.||.+.+.+..+++.++.+ .+.. ..+..
T Consensus 343 ~llvDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~----~r~~~----- 413 (755)
T PRK15029 343 RLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINF----SRFNQ----- 413 (755)
T ss_pred eEEEECccccccccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCH----HHHHH-----
Confidence 8999999864 11221 1 1 115788 999999999999988888888655 2221 01000
Q ss_pred cccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcC
Q 012991 288 LPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWG 343 (452)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~ 343 (452)
......+.+|+|..++++..|..++... .| +.+.++..+.+..+++.+.++.+
T Consensus 414 -~l~~~qSTSPSY~LmASLD~ar~~m~~~-~G-~~l~~~~i~~~~~~r~~l~~~~~ 466 (755)
T PRK15029 414 -AYMMHATTSPLYAICASNDVAVSMMDGN-SG-LSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_pred -HHHHHcCCCcHHHHHHHHHHHHHHHhhh-hh-HHHHHHHHHHHHHHHHHHHhccc
Confidence 0223345789999999999888888741 14 44556677778888888876644
No 276
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.85 E-value=4.5e-19 Score=169.78 Aligned_cols=312 Identities=18% Similarity=0.178 Sum_probs=209.1
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|++...+....++++++++-|. +..+.+++|-.|+..++.++ +++||+|++++..|.+.+.-+..+..+
T Consensus 57 Y~R~~nPT~~~lE~~~a~LEg~---~~~~afsSGmaAI~~~~l~l--------l~~GD~vl~~~~~YG~t~~~~~~~l~~ 125 (396)
T COG0626 57 YSRTGNPTRDALEEALAELEGG---EDAFAFSSGMAAISTALLAL--------LKAGDHVLLPDDLYGGTYRLFEKILQK 125 (396)
T ss_pred cccCCCccHHHHHHHHHHhhCC---CcEEEecCcHHHHHHHHHHh--------cCCCCEEEecCCccchHHHHHHHHHHh
Confidence 4444466788899999999877 47788889999999988876 689999999999999999988888888
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|+++.+++. .+ .+.+++++. .++|++|+++.|+||+-.+.|+++|+++||++|+ +++||.+.+.+
T Consensus 126 ~gi~~~~~d~----~~----~~~~~~~~~-----~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~-~vvVDNTfatP 191 (396)
T COG0626 126 FGVEVTFVDP----GD----DEALEAAIK-----EPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGA-LVVVDNTFATP 191 (396)
T ss_pred cCeEEEEECC----CC----hHHHHHHhc-----ccCceEEEEeCCCCcccccccHHHHHHHHHhcCC-EEEEECCcccc
Confidence 9999999842 22 255666662 2589999999999999999999999999999999 89999998876
Q ss_pred CccccccccCccEEEEcCcccCcCCCC---cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHH
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS---VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAV 310 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G---~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 310 (452)
... ..-..|+|+++.|.+|++ ++++ .|++..+++.+...+ +.. .....|.... + ...+..+
T Consensus 192 ~~q-~PL~~GaDIVvhSaTKyl-~GHsDvl~G~v~~~~~~~~~~~---~~~---------~~~~~G~~l~-p-~dA~l~l 255 (396)
T COG0626 192 VLQ-RPLELGADIVVHSATKYL-GGHSDVLGGVVLTPNEELYELL---FFA---------QRANTGAVLS-P-FDAWLLL 255 (396)
T ss_pred ccc-ChhhcCCCEEEEeccccc-cCCcceeeeEEecChHHHHHHH---HHH---------HHhhcCCCCC-H-HHHHHHH
Confidence 652 222348999999999975 4444 455555655554301 000 0000121111 0 0112222
Q ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCc--------------ccccceEEEEcCCccccCChhhHHH
Q 012991 311 TFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPP--------------EICAAMVMVGLPSRLRVMGEDDALR 375 (452)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (452)
+-++ .+.--.++..+++..+.++|.+.+.++ |+.|. ...++++.|.+. .+....+
T Consensus 256 RGlk----TL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~------~~~~~~~ 325 (396)
T COG0626 256 RGLR----TLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELK------NEEAAKK 325 (396)
T ss_pred hccc----hHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeC------ChHHHHH
Confidence 2222 234446667888999999999887763 55542 026899999996 2245667
Q ss_pred HHHHHhhhcceEeeecccC-CCCCC----C-C-CCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 376 LRGHLRVRFGVEVPIHYQA-PKDDG----Q-P-QAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 376 l~~~L~~~~gI~v~~~~~~-~~~~~----~-~-~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
+.+.|. -+.+....+... .-.-. + . ..-.+.+.+..++.+|+|++ .||++.|++.|++.++
T Consensus 326 f~~~L~-l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVG----lEd~eDLi~Dl~~Al~ 393 (396)
T COG0626 326 FLDSLK-LFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVG----LEDVEDLIADLEQALA 393 (396)
T ss_pred HHHhCC-ccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHH
Confidence 777773 345554332111 00000 0 0 01112334677899999998 4666677777776664
No 277
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.84 E-value=2.7e-19 Score=165.57 Aligned_cols=316 Identities=15% Similarity=0.177 Sum_probs=212.7
Q ss_pred hHHHHHHHHHHHhHhC----CC---CCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHH
Q 012991 79 RKGILESRAAVKDLIN----AD---DVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYV 151 (452)
Q Consensus 79 ~~~~~~~~~~la~~~~----~~---~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a 151 (452)
.++....++++|+++. .+ +|+++++++|+|.|++++.-.| ..||+..+++.|-|++...-.++
T Consensus 120 y~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcL--------adpgdafLvPtPyY~gfdrdl~~-- 189 (471)
T KOG0256|consen 120 YHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCL--------ADPGDAFLVPTPYYPGFDRDLRW-- 189 (471)
T ss_pred ccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHh--------cCCCceeeecCCCCCccccccee--
Confidence 3456778888888874 11 5899999999999999998877 48999999999999998655543
Q ss_pred HhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHH---HHHHHHHHcCCCEEEEe
Q 012991 152 TRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVR---KLVKICRDEGVDQVFVD 227 (452)
Q Consensus 152 ~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~---~i~~l~~~~~~~~~ivD 227 (452)
+.|++++.+... ..+..++ +++||+++.+.+..+.+.+.|++++|+||.|+.++-+ .+..++.++|+ -+|+|
T Consensus 190 -rTgveivpv~c~--Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kni-HvI~D 265 (471)
T KOG0256|consen 190 -RTGVEIVPVHCS--SSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNI-HVISD 265 (471)
T ss_pred -ccCceEEEEEee--cCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcce-EEEee
Confidence 468888877542 2334566 8999999988777788999999999999999999855 45677789999 69999
Q ss_pred cccccCCccc-----------ccc-ccCccEEEEcCcccCcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccc
Q 012991 228 AAHAMGSIKI-----------DVK-EIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESA 293 (452)
Q Consensus 228 ~a~~~g~~~~-----------~~~-~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 293 (452)
+.++...... +.. ..+-.-++.|.+|= +|.+| +|++|..++.+.. ....++.
T Consensus 266 EIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD-~GlpGfRvGviYS~ne~Vvs--aA~kmss----------- 331 (471)
T KOG0256|consen 266 EIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKD-FGLPGFRVGVIYSNNEDVVS--AATKMSS----------- 331 (471)
T ss_pred hhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccc-cCCCceEEEEEEecChHHHH--HHHHHhh-----------
Confidence 9876533210 110 11122467789995 88888 7899886655543 0111110
Q ss_pred cccccCccccccHHHHHH--HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChh
Q 012991 294 WIGTRDYSAQLVIPSAVT--FVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGED 371 (452)
Q Consensus 294 ~~~~~~~~~~~~~~~al~--~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (452)
.+.-+...+.-+..-+. ++.+ +.+.+..+|++..-+++.++|+++ |+....... +.++|+.+..-+...+-.
T Consensus 332 -f~~vSs~tQ~~la~LLSD~~f~~--~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl~s~A--GlF~wvDlr~lL~s~tfe 405 (471)
T KOG0256|consen 332 -FGLVSSQTQYLLASLLSDEEFTR--EYLRENNKRLRIRHRYIVEGLKAL-GIPCLKSNA--GLFCWVDLRKLLTSLTFE 405 (471)
T ss_pred -ccCCcHHHHHHHHHHhchHHHHH--HHHHHHHHHHHHHHHHHHhhHHhc-CCceeecCC--eeEEEEEhHHhcCcCChH
Confidence 12222222222222222 2222 146666777888888899999887 776554443 788888875433322223
Q ss_pred hHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhcc
Q 012991 372 DALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEEG 443 (452)
Q Consensus 372 ~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~~ 443 (452)
...++.+.+..+-++.+.++..+- ...+||+|+|+.. ..++.++-.+++|+..+..+
T Consensus 406 ~El~Lw~~i~~~vklnlSpG~s~~--------------C~EpGWFRvcFAn-~~~~t~~~am~Ri~~~~~~~ 462 (471)
T KOG0256|consen 406 GELELWERILDNVKLNLSPGSSCH--------------CHEPGWFRVCFAN-MSEETLEVAMRRLKQFLDSQ 462 (471)
T ss_pred HHHHHHHHHHHhhccccCCCCcce--------------ecCCCeEEEEecc-CCHHHHHHHHHHHHHHHHhh
Confidence 345677777665588876543320 3568999999985 23444665888888888744
No 278
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.84 E-value=3.1e-18 Score=169.49 Aligned_cols=339 Identities=11% Similarity=0.089 Sum_probs=209.9
Q ss_pred CCCCeEEecc----CCCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHH
Q 012991 36 HQHGVARINN----GSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAA 111 (452)
Q Consensus 36 ~~~~~~~l~~----~~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~ 111 (452)
.+..++.+.. ...|...+.+.+++.+.+........ .+ ..+...++.++|+++++. +.++|++||++|+
T Consensus 33 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~---~~~~~~~la~~L~~~~~~---~~~~f~~SGseA~ 105 (397)
T TIGR03246 33 QGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGN-GY---TNEPVLRLAKKLVDATFA---DKVFFCNSGAEAN 105 (397)
T ss_pred CCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccC-cc---CCHHHHHHHHHHHhhCCC---CEEEEeCCcHHHH
Confidence 3445555433 34667788899999988765311111 11 234567889999998865 5899999999999
Q ss_pred HHHHHHhhcccccCCC-CCCCEEEEeCCcchhHHHHHHHHHHhc---------CcEEEEEeCCCCCCChHHHHHHHHHHH
Q 012991 112 AIVLQQIGRGFTEGRF-HRNDTVLMLHCAFQAVKKSIQAYVTRA---------GGSVVEVQLPFPLASEEEIINEFKKGI 181 (452)
Q Consensus 112 ~~~~~~l~~~~~~~~~-~~g~~Vl~~~~~~~s~~~~~~~~a~~~---------g~~v~~~~~~~~~~~~~~~~~~l~~~i 181 (452)
..++..+ |.+....- ..+++|+..+..|++.......+.... ...+..+ +.++ ++.+++.+
T Consensus 106 e~Alk~a-r~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~d----~~~l~~~l 176 (397)
T TIGR03246 106 EAALKLA-RRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHA----PYND----LAAAKALI 176 (397)
T ss_pred HHHHHHH-HHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEe----CCCC----HHHHHHHh
Confidence 9999854 44421100 134578887777776543322211100 0112223 2222 68888888
Q ss_pred hccccCCCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEEEEcCc
Q 012991 182 EKGKKDGKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLH 252 (452)
Q Consensus 182 ~~~~~~~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~ 252 (452)
.+++++|+++.++++.|...+ +++|.++|++||+ ++|+|+++. +|-.. .......+|+++ ++
T Consensus 177 ------~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~-llI~DEv~tG~Gr~G~~~a~~~~gv~pDi~t--~~ 247 (397)
T TIGR03246 177 ------SDKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNA-LLIFDEVQTGVGRTGELYAYMHYGVTPDILT--SA 247 (397)
T ss_pred ------ccCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCC-EEEEechhhcCCccccchhhhhcCCCCCEEE--ee
Confidence 467999999988888886642 8899999999999 899999983 22111 111223578775 46
Q ss_pred ccCcCCCCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q 012991 253 KWFFCPPSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQAL 332 (452)
Q Consensus 253 K~l~g~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~ 332 (452)
|.+.|+.-+|+++.++++.+. + .... ...++ ..+.....+..++++.+. .+.+.++++++.+
T Consensus 248 K~lggG~pigav~~~~~i~~~-~-~~~~---------~~~t~--~~~p~~~aaa~a~l~~~~-----~~~l~~~~~~~~~ 309 (397)
T TIGR03246 248 KALGGGFPIGAMLTTTEIAAH-L-KVGT---------HGTTY--GGNPLACAVAGKVLDLVN-----TPELLAGVKQRHD 309 (397)
T ss_pred hhhhCCcceeEEEEcHHHHHh-c-cCCC---------cCCCC--CCCHHHHHHHHHHHHHHh-----hccHHHHHHHHHH
Confidence 987544447888888887664 2 1110 00111 112223333444555543 2456888899999
Q ss_pred HHHHHHHHHcC-CCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCC
Q 012991 333 KMARMLANAWG-TSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGI 411 (452)
Q Consensus 333 ~l~~~L~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~ 411 (452)
++.+.|.++.. ..+.......+.++.+.+.+. .......+++.|.++ |+.+.. .
T Consensus 310 ~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~----~~~~~~~~~~~l~~~-Gv~~~~--------------------~ 364 (397)
T TIGR03246 310 LFVDGLEKINARYNVFSEIRGKGLLIGAVLTEA----YQGKAKQFVNAAAEE-GVIALI--------------------A 364 (397)
T ss_pred HHHHHHHHHHhcCCCeEeeecCceEEEEEEcCc----hhhHHHHHHHHHHHC-CeEEee--------------------c
Confidence 99999987631 222222222244555544210 012456788888765 998742 1
Q ss_pred ccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 412 ITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 412 ~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
..+++|++++..+|++||++++++|++++..
T Consensus 365 g~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~ 395 (397)
T TIGR03246 365 GPNVVRFAPSLVISDDDIDEGLARFERAIEQ 395 (397)
T ss_pred CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 1368999999889999999999999998854
No 279
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.84 E-value=4.2e-20 Score=177.62 Aligned_cols=353 Identities=15% Similarity=0.104 Sum_probs=202.2
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHHhcC--Cch-hhh--hhhhHHHHHHHHHHHhHhCCCCCCcE---EEecChhH
Q 012991 38 HGVARINNGSFGSCPKSVLADQQKWQLKFLQQ--PDD-FYF--NSLRKGILESRAAVKDLINADDVGEI---SLVDNATT 109 (452)
Q Consensus 38 ~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~--~~~-~~~--~~~~~~~~~~~~~la~~~~~~~~~~i---~~t~g~t~ 109 (452)
+..+.|- ++-...++.|++++...+..-... |.. +|. ...+++..-+.++++++|+++ ++.. +-.-||+.
T Consensus 20 ~~~l~Li-aSEN~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~-~~~w~anvqp~SGs~ 97 (399)
T PF00464_consen 20 RSTLNLI-ASENYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAE-PKEWYANVQPHSGSQ 97 (399)
T ss_dssp HHSEE-C-TT-----HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-S-TTTEEEE---SSHHH
T ss_pred hcCcccc-CcccccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCC-cccceEEeecCCchH
Confidence 4566776 445566667888887665443221 221 221 334566777899999999996 4444 34579999
Q ss_pred HHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHH---HHHHH--H-HHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHh
Q 012991 110 AAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVK---KSIQA--Y-VTRAGGSVVEVQLPFPLASEEEI-INEFKKGIE 182 (452)
Q Consensus 110 a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~---~~~~~--~-a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~ 182 (452)
|+..++.+| ++|||+|+..+..+.++. ..... + +.....++..++++ . +.+.+ ++++++.++
T Consensus 98 An~av~~aL--------l~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d--~-~~~~ID~d~l~~~a~ 166 (399)
T PF00464_consen 98 ANLAVYMAL--------LKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVD--P-DTGLIDYDELEKLAK 166 (399)
T ss_dssp HHHHHHHHH--------T-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB---T-TTSSB-HHHHHHHHH
T ss_pred HHHHHHHHH--------HhhcCcEEecChhhcccccccccccccccccccceEEEEeeeee--c-CCCeECHHHHHHHHh
Confidence 999999988 699999998766554331 11111 0 01113466666442 1 23444 899999887
Q ss_pred ccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCc-----cccccccCccEEEEcCcccCcC
Q 012991 183 KGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSI-----KIDVKEIGADFYVSNLHKWFFC 257 (452)
Q Consensus 183 ~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~-----~~~~~~~~~d~~~~s~~K~l~g 257 (452)
+ .+|++|++....+ -..+|++++.++|++.|+ ++++|.+|-.|.+ +-.+. .+|++++|.||+|.|
T Consensus 167 ~-----~kPklIi~G~S~y--~~~~d~~~~reIad~vga-~l~~D~sH~~GLIa~g~~~~P~~--~ADvvt~sThKtl~G 236 (399)
T PF00464_consen 167 E-----HKPKLIICGASSY--PRPIDFKRFREIADEVGA-YLMADISHIAGLIAGGLFPNPFP--YADVVTGSTHKTLRG 236 (399)
T ss_dssp H-----H--SEEEEE-SST--SS---HHHHHHHHHHTT--EEEEE-TTTHHHHHTTSS--GCC--TSSEEEEESSGGG-S
T ss_pred h-----cCCCEEEECchhc--cCccCHHHHHHHHHhcCc-EEEecccccccceehheecCccc--cceEEEeeccccccc
Confidence 4 6899999975543 457899999999999999 8999999976543 33333 389999999999999
Q ss_pred CCCcEEEEEecCccccCCCCCceeccCCCCccccccc---ccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 012991 258 PPSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAW---IGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKM 334 (452)
Q Consensus 258 ~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l 334 (452)
|.| |++++++...............+... .-...+ .|.+....+.++..++..+.+. .++.+.+++.++++.|
T Consensus 237 Prg-giI~~~~~~~~~~~~~~~~~~~l~~~-I~~avfP~~qg~~h~~~iaalAval~ea~~~--~fk~Ya~qVv~NAk~L 312 (399)
T PF00464_consen 237 PRG-GIILTNKGSKNVDKKGKEIDEELAEK-IDSAVFPGLQGGPHMHRIAALAVALKEALSP--EFKEYAKQVVKNAKAL 312 (399)
T ss_dssp SS--EEEEES-SEEEE-TTS-EEEHHHHHH-HHHHHTTTT-SS--HHHHHHHHHHHHHHTSH--HHHHHHHHHHHHHHHH
T ss_pred cCc-eEEEEcCCccccCCcccccHHHHHHH-hccccCCCcccCcchhHHHHHHHHHhcccCH--HHHHHHHHHHHHHHHH
Confidence 998 99999832222100000000000000 000011 1445555666777677665432 5688999999999999
Q ss_pred HHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccc
Q 012991 335 ARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITG 414 (452)
Q Consensus 335 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (452)
.+.|.+. |+.+... ....+++++.+.. .+.+..+..+.|.+ .||.+.....+...+ ...+.
T Consensus 313 a~~L~~~-G~~v~~g-gTd~H~vlvd~~~-----~~~~g~~a~~~Le~-~gI~vnkn~iP~d~~-----------~~~~s 373 (399)
T PF00464_consen 313 AEALQER-GFKVVTG-GTDNHQVLVDLRS-----FGIDGKEAEKALEE-AGIIVNKNTIPGDRS-----------PFVPS 373 (399)
T ss_dssp HHHHHHT-T-EEGGG-S-SSSEEEEEGGG-----GTS-HHHHHHHHHH-TTEE-EEE--TTTST-----------TTT-S
T ss_pred HHHHhhC-CcEEEEC-CCCCCeEEEEecc-----cccchHHHHHHHHh-cCeeecccccCCCCC-----------CCCCC
Confidence 9999987 8887653 2347788888741 24577778788854 699986533332111 23467
Q ss_pred eEEecccccC----CHHHHHHHHHHH
Q 012991 415 YARISHQVYN----TLEDYEKFRDAV 436 (452)
Q Consensus 415 ~iRis~~~~~----t~~di~~l~~~l 436 (452)
.|||+....+ .++|++.+.+.|
T Consensus 374 GlRlGT~~lT~rG~~e~dm~~iA~~I 399 (399)
T PF00464_consen 374 GLRLGTPALTRRGMKEEDMKEIAELI 399 (399)
T ss_dssp EEEEESHHHHHTT--HHHHHHHHHHH
T ss_pred EEEECCHHHHhCCCCHHHHHHHHhhC
Confidence 8999987654 367777776654
No 280
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.84 E-value=7e-20 Score=162.55 Aligned_cols=333 Identities=14% Similarity=0.131 Sum_probs=226.2
Q ss_pred CeEEeccCCCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHh
Q 012991 39 GVARINNGSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQI 118 (452)
Q Consensus 39 ~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l 118 (452)
..+.|-......+..+.+++|.+... ++.. |+.++...++++.+|+++|- +..+|++|||.++.++++.-
T Consensus 22 ~~vDLRSDTvT~PTdeMr~am~eA~v-----gDdV--yGeD~tt~rLE~~vA~l~GK---EAgLFv~SGTmgNllaIm~H 91 (384)
T KOG1368|consen 22 RSVDLRSDTVTVPTDEMRRAMAEASV-----GDDV--YGEDPTTNRLEQRVAELFGK---EAGLFVPSGTMGNLLAIMVH 91 (384)
T ss_pred eccccccccccCChHHHHHHHhhccc-----Cccc--ccCCccHHHHHHHHHHHhCc---cceeeecccccccHHHHHHH
Confidence 34455555555555556666655432 2222 34456678999999999998 47799999999999999876
Q ss_pred hcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccc--cCCCceEEEE
Q 012991 119 GRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGK--KDGKMIRLAI 195 (452)
Q Consensus 119 ~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~--~~~~~~~lv~ 195 (452)
+ .++|.+|++.+.+|.-.+..-.. +.-.|+.++.+ ...+++.+ ++++|++++-.. -+.+-|++|.
T Consensus 92 c-------~~rg~eii~gd~~HI~~~E~gg~-s~l~gv~~~tv----~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIc 159 (384)
T KOG1368|consen 92 C-------HQRGSEIIVGDRAHIHRYEQGGI-SQLAGVHVRTV----KNENDGTMDLEDIEAAIRVPKGDCHMPPTKLIC 159 (384)
T ss_pred h-------cCCCceEEeccchheeehhccCh-hhhccceeEee----eeCCCCeeeHHHHHHhhcCCCCCccCCCceEEE
Confidence 3 46899999999988765544332 45567888888 44556677 999999997432 1224689999
Q ss_pred EeccCCCCc-ccccHHH---HHHHHHHcCCCEEEEeccccc---CCccccccc--cCccEEEEcCcccCcCCCCcEEEEE
Q 012991 196 IDHITSMPC-VVIPVRK---LVKICRDEGVDQVFVDAAHAM---GSIKIDVKE--IGADFYVSNLHKWFFCPPSVAFLYC 266 (452)
Q Consensus 196 ~~~~~n~tG-~~~~l~~---i~~l~~~~~~~~~ivD~a~~~---g~~~~~~~~--~~~d~~~~s~~K~l~g~~G~G~l~~ 266 (452)
+++.++.+| .++|+++ |.++|+++|+ .+++|||--+ -...+.+++ -.+|.++..++|.+++|.| .+++.
T Consensus 160 lENT~~~~Gg~vlPle~~~~v~~lak~~gl-kLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAPVG-SViVG 237 (384)
T KOG1368|consen 160 LENTHNNCGGKVLPLEELDRVKALAKRHGL-KLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAPVG-SVIVG 237 (384)
T ss_pred eeccccccCceEeeHHHHHHHHHHHhccCC-eeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCCcc-cEEEc
Confidence 999998887 8899775 5778999999 7999997321 111222222 2478999999999999997 78889
Q ss_pred ecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 012991 267 RKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSL 346 (452)
Q Consensus 267 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~ 346 (452)
+++++.+ ...+...+|+++. + + .+++. +++-.+.+ .+. ..++-.+++..+.+.+.+.+++++
T Consensus 238 ~k~FI~k---A~~~RKalGGGmR-Q--------s-GvLaa-aaLval~~---~~~-~L~~dHk~A~~lAe~~~~~~~i~v 299 (384)
T KOG1368|consen 238 SKDFIDK---ARHFRKALGGGMR-Q--------S-GVLAA-AALVALDE---NVP-LLRADHKRAKELAEYINTPEEIRV 299 (384)
T ss_pred cHHHHHH---HHHHHHHhcCchh-H--------H-HHHHH-HHHHHhhc---chH-HHHHHHHHHHHHHHHhccccceee
Confidence 9999986 3444444555541 1 0 11111 12222222 233 344456777778888877655766
Q ss_pred CCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCH
Q 012991 347 GSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTL 426 (452)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~ 426 (452)
..+... .+++.+.+.. ...++.++++.+.+ +||.+-.+ ....+|+.+++-.|.
T Consensus 300 ~v~a~e-tNiv~~~l~q-----~~~~~~~l~~~~~k-~gi~lm~~--------------------~s~r~Rivlh~Qvt~ 352 (384)
T KOG1368|consen 300 EVPAVE-TNIVNMVLCQ-----ARLTAEELCKFLEK-NGILLMGG--------------------ASRRIRIVLHHQVTD 352 (384)
T ss_pred ecchhh-cceeeeeccc-----ccCCHHHHHHHHHH-CCeEEeec--------------------cccceEEEEEEecCH
Confidence 555221 5566655531 36789999999954 69987421 123599999998999
Q ss_pred HHHHHHHHHHHHHH
Q 012991 427 EDYEKFRDAVILLV 440 (452)
Q Consensus 427 ~di~~l~~~l~~~~ 440 (452)
++++.+...+++.+
T Consensus 353 ~~ve~~~~~~~k~~ 366 (384)
T KOG1368|consen 353 EDVEYVKSVLSKKF 366 (384)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999995444
No 281
>PLN02624 ornithine-delta-aminotransferase
Probab=99.84 E-value=4.3e-18 Score=171.34 Aligned_cols=333 Identities=14% Similarity=0.163 Sum_probs=208.0
Q ss_pred CCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccC--
Q 012991 48 FGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEG-- 125 (452)
Q Consensus 48 ~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~-- 125 (452)
.|...+.|.+++.+.+.... ..+.. -..+...++.+.++++++. +.++|+++|++|+..++. +++.++..
T Consensus 89 ~Gh~~p~v~~ai~~ql~~~~-~~~~~---~~~~~~~~la~~L~~~~~~---~~~~f~~SGseA~e~Alk-lAr~~~~~~~ 160 (474)
T PLN02624 89 QGHCHPKIIKALTEQAEKLT-LSSRA---FYNDKFPEFAEYLTSMFGY---DMVLPMNTGAEGVETAIK-LARKWGYEKK 160 (474)
T ss_pred CCCCCHHHHHHHHHHHHhcC-Ccccc---cCCHHHHHHHHHHHhhcCC---CeEEEeCChHHHHHHHHH-HHHHHHHhhc
Confidence 35567779999999887642 11111 1245567788899998865 589999999999999998 55554210
Q ss_pred CCCCC-CEEEEeCCcchhHHHHHHHHHHhc----C-----cEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEE
Q 012991 126 RFHRN-DTVLMLHCAFQAVKKSIQAYVTRA----G-----GSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAI 195 (452)
Q Consensus 126 ~~~~g-~~Vl~~~~~~~s~~~~~~~~a~~~----g-----~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~ 195 (452)
...++ ..|+.....|++.......+.... + ..+..+ +.++ .+.+++.++.. ..++++|+
T Consensus 161 g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~----~~~d----~~~l~~~l~~~---~~~iaaii 229 (474)
T PLN02624 161 GIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKV----DFGD----LDALEKIFEED---GDRIAAFL 229 (474)
T ss_pred CCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEe----CCCC----HHHHHHHHHhC---CCCEEEEE
Confidence 00123 357777777777533322111000 0 011222 2222 57777777532 46799999
Q ss_pred EeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCc----cccccccCccEEEEcCcccCcCC-CCcEEEE
Q 012991 196 IDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSI----KIDVKEIGADFYVSNLHKWFFCP-PSVAFLY 265 (452)
Q Consensus 196 ~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~----~~~~~~~~~d~~~~s~~K~l~g~-~G~G~l~ 265 (452)
++.+++++|.+.| +++|.++|++||+ ++|+|++|+ +|.. ..+.....+|++++| |.++++ ..+|.++
T Consensus 230 iEpv~~~~G~v~p~~~~L~~l~~lc~~~gi-llI~DEv~tG~GrtG~~~a~~~~~i~pDiv~ls--K~lggG~~pigav~ 306 (474)
T PLN02624 230 FEPIQGEAGVVIPPDGYLKAVRELCSKHNV-LMIADEIQTGLARTGKMLACDWEEVRPDVVILG--KALGGGVIPVSAVL 306 (474)
T ss_pred ECCccCCCCCcCCCHHHHHHHHHHHHHcCC-EEEEeccccCcCcCcchhhHHhcCCCCCEEEec--ccccCCCCcceeee
Confidence 9999999999988 9999999999999 899999987 3321 223334467888875 986654 3478888
Q ss_pred EecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHc-CC
Q 012991 266 CRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAW-GT 344 (452)
Q Consensus 266 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~-~~ 344 (452)
.++++... + .+.. . .. +...+.....+..++++.+.+ +.+.++..++.+++++.|.++. .+
T Consensus 307 ~~~~i~~~-~-~~~~---~------~~--T~~g~pl~~aaa~aaLe~l~~-----~~l~~~~~~~~~~l~~~L~~l~~~~ 368 (474)
T PLN02624 307 ADKDVMLC-I-KPGE---H------GS--TFGGNPLASAVAMAALQVVQD-----EKLAERSAKLGQELRDQLQKIQKQF 368 (474)
T ss_pred ecHHHHhH-h-ccCC---c------CC--CCCCCHHHHHHHHHHHHHHHh-----chHHHHHHHHHHHHHHHHHHHHHhC
Confidence 87766654 1 1110 0 00 011233344445555655543 2356677778888888887652 12
Q ss_pred C-cCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEeccccc
Q 012991 345 S-LGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVY 423 (452)
Q Consensus 345 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~ 423 (452)
. ........+.++.+.+.... .....+.++++.|.+ .||.+... ..+++||+++..
T Consensus 369 ~~~i~~vrg~G~~~~i~l~~~~--~~~~~a~~~~~~L~e-~GV~v~p~--------------------~~~~lR~~p~l~ 425 (474)
T PLN02624 369 PKLIKEVRGRGLLNAVVLNSPK--LGPVSAYDVCLKLKE-RGLLAKPT--------------------HDTIIRLAPPLS 425 (474)
T ss_pred CCceEEEEeeEEEEEEEecCCC--cChHHHHHHHHHHHh-CCeEEecC--------------------CCCEEEEECCcc
Confidence 1 11111123455555553110 002345678888866 59998521 246899999888
Q ss_pred CCHHHHHHHHHHHHHHHhcc
Q 012991 424 NTLEDYEKFRDAVILLVEEG 443 (452)
Q Consensus 424 ~t~~di~~l~~~l~~~~~~~ 443 (452)
+|++||+.++++|+++++..
T Consensus 426 ~t~e~id~~l~~L~~~l~~~ 445 (474)
T PLN02624 426 ISEDELQECSKALSDVLEHD 445 (474)
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998654
No 282
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.84 E-value=5.8e-18 Score=168.08 Aligned_cols=339 Identities=12% Similarity=0.145 Sum_probs=214.9
Q ss_pred CCCCeEEeccCC----CCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHH
Q 012991 36 HQHGVARINNGS----FGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAA 111 (452)
Q Consensus 36 ~~~~~~~l~~~~----~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~ 111 (452)
.+..++.+..+. .|...+.+.+++.+.+.... ..+. ....+...++.+.++++++. +.++++++|++|+
T Consensus 35 ~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~-~~~~---~~~~~~~~~l~~~l~~~~~~---~~~~~~~SGs~A~ 107 (401)
T TIGR01885 35 EGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLT-LSSR---AFYNDVFGEFAEYVTKLFGY---DKVLPMNTGAEAV 107 (401)
T ss_pred CCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhcc-cccc---ccCCHHHHHHHHHHHhhcCC---CEEEEeCccHHHH
Confidence 345555554432 33457779999988876532 1111 11356678899999999875 5889999999999
Q ss_pred HHHHHHhhcccccC---CCCCCCEEEEeCCcchhH-HHHHHHHHHh------cC---cEEEEEeCCCCCCChHHHHHHHH
Q 012991 112 AIVLQQIGRGFTEG---RFHRNDTVLMLHCAFQAV-KKSIQAYVTR------AG---GSVVEVQLPFPLASEEEIINEFK 178 (452)
Q Consensus 112 ~~~~~~l~~~~~~~---~~~~g~~Vl~~~~~~~s~-~~~~~~~a~~------~g---~~v~~~~~~~~~~~~~~~~~~l~ 178 (452)
..++..+. .+... ....++.|+.....|++. ..++.. ... .+ ..+..+ +..+ ++.++
T Consensus 108 e~ai~~a~-~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~d----~~~le 177 (401)
T TIGR01885 108 ETAIKLAR-KWGYKVKGIPENQAIIVSAKGNFHGRTLGAISM-STDPDSRTNFGPYVPGFKKI----PYNN----LEALE 177 (401)
T ss_pred HHHHHHHH-HHhhhhcCCCCCCCEEEEECCCcCcccHHHHhC-cCCcccccccCCCCCCceEe----CCCC----HHHHH
Confidence 99998652 22100 012346788888887753 333322 110 11 112223 2222 57788
Q ss_pred HHHhccccCCCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCc--c--ccccccCccEEEE
Q 012991 179 KGIEKGKKDGKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSI--K--IDVKEIGADFYVS 249 (452)
Q Consensus 179 ~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~--~--~~~~~~~~d~~~~ 249 (452)
+.+++. ..++.+|+++.+.+++|.+.| +++|.++|++||+ ++|+|++|. +|.. . .+...+.+|++++
T Consensus 178 ~~l~~~---~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~-lli~DEv~~g~g~~G~~~~~~~~~~~~di~~~ 253 (401)
T TIGR01885 178 EALEDH---GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNV-LLIADEIQTGLGRTGKLLCVDHENVKPDIVLL 253 (401)
T ss_pred HHHHhc---CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCC-EEEEechhhCCCccchhhHHhhcCCCCCEEEe
Confidence 888643 357889999999999999987 8999999999999 899999974 3211 1 2223446888876
Q ss_pred cCcccCcCC-CCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHH
Q 012991 250 NLHKWFFCP-PSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNH 328 (452)
Q Consensus 250 s~~K~l~g~-~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~ 328 (452)
| |.+.++ ..+|+++.++++++. +.... . ...+ +.+.....+..++++.+.+ +.+.++.+
T Consensus 254 g--K~l~~g~~~ig~v~~~~~i~~~-~~~~~----~------~~t~--~~~p~~~~aa~a~L~~i~~-----~~l~~~~~ 313 (401)
T TIGR01885 254 G--KALSGGVYPVSAVLADDDVMLT-IKPGE----H------GSTY--GGNPLACAVAVAALEVLEE-----EKLAENAE 313 (401)
T ss_pred e--ccccCCCCCcEEEEEcHHHHhh-ccCCC----C------CCCC--CCCHHHHHHHHHHHHHHHh-----ccHHHHHH
Confidence 5 987543 237888888777764 21111 0 0111 1222334444556666553 24567788
Q ss_pred HHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCC
Q 012991 329 EQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDK 408 (452)
Q Consensus 329 ~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~ 408 (452)
++.+++++.|.++ +..++......+.+..+.++.. ..+.+..++.+.|.++ ||.+..
T Consensus 314 ~~~~~~~~~L~~l-~~~~~~~~~g~g~~~~i~~~~~---~~~~~~~~l~~~l~~~-Gv~v~~------------------ 370 (401)
T TIGR01885 314 KLGEIFRDQLKKL-PKPIITEVRGRGLLNAIVIDES---KTGRTAWDLCLKLKEK-GLLAKP------------------ 370 (401)
T ss_pred HHHHHHHHHHHhc-cCCceeEEeecCeeEEEEeccC---cchhHHHHHHHHHHhC-CEEEEe------------------
Confidence 8899999999887 3333222222355655555421 0013567899999764 999842
Q ss_pred CCCccceEEecccccCCHHHHHHHHHHHHHHH
Q 012991 409 DGIITGYARISHQVYNTLEDYEKFRDAVILLV 440 (452)
Q Consensus 409 ~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~ 440 (452)
..++.+|++++...+++||++++++|++++
T Consensus 371 --~~~~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 371 --THGNIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred --cCCCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 123689999998899999999999999876
No 283
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.83 E-value=1.9e-19 Score=156.50 Aligned_cols=165 Identities=21% Similarity=0.213 Sum_probs=131.1
Q ss_pred HHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEE
Q 012991 82 ILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEV 161 (452)
Q Consensus 82 ~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~ 161 (452)
++++++.++++++.+ .+++++++|+|+|+.+++.++ .+++++|+++++.|++... ..+...|.+++.+
T Consensus 2 ~~~~~~~l~~~~~~~-~~~~~~~~~~t~a~~~~~~~~--------~~~~~~v~~~~~~~~~~~~---~~~~~~g~~~~~v 69 (170)
T cd01494 2 LEELEEKLARLLQPG-NDKAVFVPSGTGANEAALLAL--------LGPGDEVIVDANGHGSRYW---VAAELAGAKPVPV 69 (170)
T ss_pred HHHHHHHHHHHcCCC-CCcEEEeCCcHHHHHHHHHHh--------CCCCCEEEEeecccceehh---hHHHhcCCEEEEe
Confidence 468899999999753 578999999999999999987 3568999999999998763 1246679999998
Q ss_pred eCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccc---
Q 012991 162 QLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKI--- 237 (452)
Q Consensus 162 ~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~--- 237 (452)
+.+. +..... .+.+++... +.+++++++++++|++|...|+++|+++|+++|+ ++|+|++++.+....
T Consensus 70 ~~~~--~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~-~li~D~a~~~~~~~~~~~ 141 (170)
T cd01494 70 PVDD--AGYGGLDVAILEELKA-----KPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGI-LLLVDAASAGGASPAPGV 141 (170)
T ss_pred ccCC--CCccchhhhhhhhccc-----cCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCC-EEEEeccccccccccccc
Confidence 6421 111111 224444332 5789999999999999999999999999999999 799999999877765
Q ss_pred cccccCccEEEEcCcccCcCCCCcEEEEEe
Q 012991 238 DVKEIGADFYVSNLHKWFFCPPSVAFLYCR 267 (452)
Q Consensus 238 ~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~ 267 (452)
+....++|+++.|+||++++ +|+|++++|
T Consensus 142 ~~~~~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 142 LIPEGGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred ccccccCCEEEEEcccccCC-CceEEEEeC
Confidence 45566899999999998666 778999875
No 284
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.83 E-value=8.2e-18 Score=167.98 Aligned_cols=339 Identities=12% Similarity=0.132 Sum_probs=213.8
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|..++.|.+++.+.+...... . .+...+...++.++|++++..+ .+.++|++|||+|+..++. ++|.++..
T Consensus 95 ~lGH~~p~v~~Ai~~ql~~l~~~-~---~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~SGsEAve~Alk-lAr~~t~~- 167 (459)
T PRK11522 95 NVGHRNPVVVSAVQNQLAKQPLH-S---QELLDPLRAMLAKTLAALTPGK-LKYSFFCNSGTESVEAALK-LAKAYQSP- 167 (459)
T ss_pred hcCCCCHHHHHHHHHHHhhCccc-c---cccCCHHHHHHHHHHHHhCCCC-CCEEEEeCCchHHHHHHHH-HHHHHhcc-
Confidence 35677888999999988754211 1 1223455677888888887643 4689999999999999998 55555310
Q ss_pred CCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCC-----CCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCC
Q 012991 127 FHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLP-----FPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITS 201 (452)
Q Consensus 127 ~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~-----~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n 201 (452)
+.+.+|+....+|++.......+......+..+.+.. .|..+ .+.+++.+++......++.+|+++....
T Consensus 168 -~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d----~~~l~~~l~~~~~~~~~iAavIvEpv~g 242 (459)
T PRK11522 168 -RGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGN----IEAMRTALSECKKTGDDVAAVILEPIQG 242 (459)
T ss_pred -CCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCC----HHHHHHHHHHhhccCCcEEEEEEecccC
Confidence 1245788888888886544322111000000000000 01111 4566666653222246789999999999
Q ss_pred CCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEEEEcCcccCcCC-CCcEEEEEecCcc
Q 012991 202 MPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLHKWFFCP-PSVAFLYCRKSIL 271 (452)
Q Consensus 202 ~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~l~g~-~G~G~l~~~~~~~ 271 (452)
..|.+.| ++++.++|++||+ ++|+|+++. +|-.. .+.....+|+++++ |.++|+ ..+|.+++++++.
T Consensus 243 ~~G~~~pp~~yl~~lr~lc~~~g~-llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~g--K~lggG~~Pigav~~~~~i~ 319 (459)
T PRK11522 243 EGGVILPPEGYLTAVRKLCDEFGA-LLILDEVQTGMGRTGKMFACEHENVQPDILCLA--KALGGGVMPIGATIATEEVF 319 (459)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCC-EEEeccceecCCccchhhhhhccCCCCCEEEec--hhhhCCCccceeEEEcHHHH
Confidence 9999887 8999999999999 999999984 33221 12223358988665 988765 2478888887766
Q ss_pred ccCCC-CCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHc-CCC-cCC
Q 012991 272 SSDMH-HPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAW-GTS-LGS 348 (452)
Q Consensus 272 ~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~-~~~-~~~ 348 (452)
+. +. .++. ...++.| +.....+..++++.+.+ +.+.++++++.++|.+.|.++. ... ++.
T Consensus 320 ~~-~~~~~~~---------~~~T~~g--np~~~Aaala~L~~i~~-----~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~ 382 (459)
T PRK11522 320 SV-LFDNPFL---------HTTTFGG--NPLACAAALATINVLLE-----QNLPAQAEQKGDYLLDGFRQLAREYPDLVQ 382 (459)
T ss_pred HH-hccCCcc---------cCCCCCC--CHHHHHHHHHHHHHHhc-----chHHHHHHHHHHHHHHHHHHHHHhCCCcee
Confidence 54 11 1110 0001111 22233334445555553 3567889999999999998763 222 222
Q ss_pred CcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHH
Q 012991 349 PPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLED 428 (452)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~d 428 (452)
.....+.++.+.+. +......+.+.|.++ ||.+.... ...+.+|++++...|++|
T Consensus 383 ~VrG~Gl~~giel~------~~~~~~~i~~~l~~~-Gvl~~~~~------------------~~~~~lr~~Ppl~~t~~~ 437 (459)
T PRK11522 383 EARGKGMLMAIEFV------DNEIGYNFASEMFRQ-RVLVAGTL------------------NNAKTIRIEPPLTLTIEQ 437 (459)
T ss_pred eEEeceeEEEEEec------CchHHHHHHHHHHHC-CeEEEecC------------------CCCCEEEEECCccCCHHH
Confidence 22234667777664 122356788888774 99985221 124689999999999999
Q ss_pred HHHHHHHHHHHHhc
Q 012991 429 YEKFRDAVILLVEE 442 (452)
Q Consensus 429 i~~l~~~l~~~~~~ 442 (452)
|++++++|.++++.
T Consensus 438 id~~l~~l~~~l~~ 451 (459)
T PRK11522 438 CEQVLKAARKALAA 451 (459)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999865
No 285
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.83 E-value=9.6e-18 Score=166.44 Aligned_cols=324 Identities=13% Similarity=0.090 Sum_probs=204.3
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|...+.+.+++.+.+......... ...+...++.++++++++. +.++|++||++|+..++... |++....
T Consensus 52 ~lGh~~p~v~~A~~~~~~~~~~~~~~----~~~~~~~~la~~l~~~~~~---~~v~~~~sGseA~e~Alk~a-r~~~~~~ 123 (406)
T PRK12381 52 ALGHAHPALREALNEQASKFWHTGNG----YTNEPVLRLAKKLIDATFA---DRVFFCNSGAEANEAALKLA-RKYAHDR 123 (406)
T ss_pred cCCCCCHHHHHHHHHHHhhcccccCc----cCCHHHHHHHHHHHhhCCC---CeEEEcCCcHHHHHHHHHHH-HHHHhhc
Confidence 46677778999999987653111111 1234457788999998754 59999999999999999854 4442111
Q ss_pred C-CCCCEEEEeCCcchhHHHHHHHHHHhcCcE------------EEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEE
Q 012991 127 F-HRNDTVLMLHCAFQAVKKSIQAYVTRAGGS------------VVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRL 193 (452)
Q Consensus 127 ~-~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~------------v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~l 193 (452)
. ..+.+|+..+..|++.......+ .+.. +..+ +..+ .+.+++.+ .+++++
T Consensus 124 ~~~~r~~ii~~~~~yHG~t~~~~~~---~~~~~~~~~~~~~~~~~~~~----~~~d----~~~l~~~l------~~~~aa 186 (406)
T PRK12381 124 YGSHKSGIVAFKNAFHGRTLFTVSA---GGQPKYSQDFAPLPPDIRHA----AYND----LNSASALI------DDQTCA 186 (406)
T ss_pred CCCCCCeEEEECCCcCCcchhHHhh---cCCcccccCCCCCCCCeeEe----CCCC----HHHHHHhc------cCCeeE
Confidence 1 24568888888888865433222 1211 1111 1111 67888888 467889
Q ss_pred EEEeccCCCCcccc-----cHHHHHHHHHHcCCCEEEEecccc-cCCcc--c--cccccCccEEEEcCcccCcCCCCcEE
Q 012991 194 AIIDHITSMPCVVI-----PVRKLVKICRDEGVDQVFVDAAHA-MGSIK--I--DVKEIGADFYVSNLHKWFFCPPSVAF 263 (452)
Q Consensus 194 v~~~~~~n~tG~~~-----~l~~i~~l~~~~~~~~~ivD~a~~-~g~~~--~--~~~~~~~d~~~~s~~K~l~g~~G~G~ 263 (452)
|+++. .+++|-+. .+++|.++|++||+ ++|+|+++. +|... + ......+|++ +++|.+.++.-+|+
T Consensus 187 viiEP-v~~~gg~~~~~~~~l~~l~~l~~~~~~-llI~DEv~tG~gr~G~~~~~~~~~v~pDi~--t~sK~l~gG~~ig~ 262 (406)
T PRK12381 187 VIVEP-IQGEGGVIPADKAFLQGLRELCDRHNA-LLIFDEVQTGVGRTGELYAYMHYGVTPDVL--TTAKALGGGFPIGA 262 (406)
T ss_pred EEEeC-CcCCCCCcCCCHHHHHHHHHHHHHcCC-EEEEcchhhCCCCCcchhhhHhhCCCCCEE--EehhhhhCCCceEE
Confidence 99874 45555432 37799999999999 899999984 32221 1 1222357765 55698765444899
Q ss_pred EEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHc-
Q 012991 264 LYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAW- 342 (452)
Q Consensus 264 l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~- 342 (452)
++.++++.+. + .... ... +...+.....+..++++.+.+ +.++++++++.+++.+.|.++.
T Consensus 263 ~~~~~~~~~~-~-~~~~---------~~~--t~~~~pl~~aaa~a~l~~l~~-----~~~~~~~~~~~~~l~~~L~~l~~ 324 (406)
T PRK12381 263 MLTTEKCASV-M-TVGT---------HGT--TYGGNPLASAVAGKVLELINT-----PEMLNGVKQRHDWFVERLNTINA 324 (406)
T ss_pred EEEcHHHHhh-c-CCCC---------CCC--CCCCCHHHHHHHHHHHHHHhh-----ccHHHHHHHHHHHHHHHHHHHHh
Confidence 8888887765 2 1110 000 012233334444455655542 3568888899999999998762
Q ss_pred CCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccc
Q 012991 343 GTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQV 422 (452)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 422 (452)
...+.......+.++++.++.. .......+.+.|.++ ||.+.. ..++.+|++++.
T Consensus 325 ~~~~~~~vrg~Gl~~~~~l~~~----~~~~~~~~~~~l~~~-Gv~v~~--------------------~g~~~lRl~p~~ 379 (406)
T PRK12381 325 RYGLFSEIRGLGLLIGCVLNAE----YAGKAKQISQEAAKA-GVMVLI--------------------AGPNVVRFAPAL 379 (406)
T ss_pred hCCCEEEEecCeEEEEEEecCc----hhhHHHHHHHHHHHC-CcEEee--------------------CCCCEEEEeCCc
Confidence 2222222223356667766420 012456788888764 999842 113689999998
Q ss_pred cCCHHHHHHHHHHHHHHHhc
Q 012991 423 YNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 423 ~~t~~di~~l~~~l~~~~~~ 442 (452)
..|++||++++++|++++++
T Consensus 380 ~~t~~~i~~~~~~l~~~l~~ 399 (406)
T PRK12381 380 NISEEEITTGLDRFARACER 399 (406)
T ss_pred cCCHHHHHHHHHHHHHHHHH
Confidence 88999999999999998864
No 286
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.83 E-value=1.1e-17 Score=164.64 Aligned_cols=331 Identities=10% Similarity=0.106 Sum_probs=197.7
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|...+.+.+++.+.+.... .+.. ....+...++.+.+.+..+ .+.++|++||++|+..++..+ +.+.. .
T Consensus 49 ~lGh~~p~v~~a~~~q~~~~~-~~~~---~~~~~~~~~la~~l~~~~~---~~~v~f~~SGseA~e~Aik~a-r~~~~-~ 119 (395)
T PRK03715 49 CLGHCNPGMVEALAAQAEKLI-NPSP---AFYNEPMAKLAGLLTQHSC---FDKVFFANSGAEANEGAIKLA-RKWGR-K 119 (395)
T ss_pred cCCCCCHHHHHHHHHHHHhcc-cccc---cccCHHHHHHHHHHhhccC---CCEEEEeCCcHHHHHHHHHHH-HHHhh-c
Confidence 456667779999998876532 1111 1123344555555555432 358999999999999999865 33321 1
Q ss_pred CCC-CCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCC-hHHHHHHHHHHHhccccCCCceEEEEEeccCCCCc
Q 012991 127 FHR-NDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLAS-EEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPC 204 (452)
Q Consensus 127 ~~~-g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~-~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG 204 (452)
.++ .++|+..+..||+.......+......+....+....... .....+.+++.+ .+++++|+++..++..|
T Consensus 120 ~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l------~~~~aavi~Epv~~~gG 193 (395)
T PRK03715 120 HKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLI------TDKTVAVMLEPVQGEGG 193 (395)
T ss_pred cCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHc------CCCceEEEEeCCcCCCC
Confidence 122 3578888777766443332221111111111111000000 001267888888 45789999999999999
Q ss_pred cccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEEEEcCcccCcCCCCcEEEEEecCccccCC
Q 012991 205 VVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDM 275 (452)
Q Consensus 205 ~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l 275 (452)
.+.| +++|.++|++||+ ++|+|++++ +|-.. .+.....+|+++++ |.+.++..+|.+++++++...
T Consensus 194 ~~~~~~~~l~~l~~l~~~~~~-llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t~g--K~lg~G~p~~av~~~~~i~~~-- 268 (395)
T PRK03715 194 VIPATREFMQQLRALTKQHGL-LLIVDEVQTGCGRTGTLFAYELSGIEPDIMTLG--KGIGGGVPLAALLAKAEVAVF-- 268 (395)
T ss_pred CccCCHHHHHHHHHHHHHcCC-EEEEeccccCCCCCcchhhHhhcCCCCceeeeh--hhhhCCcceEEEEEccccccc--
Confidence 9877 9999999999999 899999986 22221 12223358987765 988775557888888777531
Q ss_pred CCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcC-CCcCCCccccc
Q 012991 276 HHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWG-TSLGSPPEICA 354 (452)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~~ 354 (452)
.... ...++.+ +.....+..++++.+.+ +.+.++.+++.+++.+.|.++.. ..+ ......+
T Consensus 269 ~~~~----------~~~T~~g--~pl~~aaala~L~~l~~-----~~l~~~~~~~g~~l~~~L~~l~~~~~i-~~vrG~G 330 (395)
T PRK03715 269 EAGD----------QGGTYNG--NPLMTAVGVAVISQLLA-----PGFLEGVRARGEYLKEKLLELSEERGL-EGERGEG 330 (395)
T ss_pred cCCC----------cCCCCCC--CHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHHHHHhhcCCc-CeEEcce
Confidence 1110 0111112 22233334445555542 45688888999999998876521 112 1122336
Q ss_pred ceEEEEcCCccccCChhhHHHHHHHHhh--hcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHH
Q 012991 355 AMVMVGLPSRLRVMGEDDALRLRGHLRV--RFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKF 432 (452)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l 432 (452)
.++.+.+.+ . ....+.+.+.+ +.||.+.. ..++.+|++++...|++||+.+
T Consensus 331 lm~~i~l~~------~-~~~~~~~~~~~~~~~Gi~~~~--------------------~~~~~lR~~p~l~~t~~ei~~~ 383 (395)
T PRK03715 331 LLRALLLGK------D-IGPQIVEKARDMQPDGLLLNA--------------------PRPNLLRFMPALNVTTEEIDQM 383 (395)
T ss_pred eEEEEEecC------c-hHHHHHHHHHhccCCCEEEee--------------------cCCCEEEEeCCcccCHHHHHHH
Confidence 666666641 1 22334433322 12988742 1235899999999999999999
Q ss_pred HHHHHHHHhc
Q 012991 433 RDAVILLVEE 442 (452)
Q Consensus 433 ~~~l~~~~~~ 442 (452)
+++|++.++.
T Consensus 384 ~~~l~~~l~~ 393 (395)
T PRK03715 384 IAMLRSVLDK 393 (395)
T ss_pred HHHHHHHHHh
Confidence 9999998863
No 287
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.83 E-value=2.1e-17 Score=164.14 Aligned_cols=338 Identities=12% Similarity=0.117 Sum_probs=207.3
Q ss_pred CCCCeEEeccC----CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHH
Q 012991 36 HQHGVARINNG----SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAA 111 (452)
Q Consensus 36 ~~~~~~~l~~~----~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~ 111 (452)
.++.++.+..+ ..|..++.+.+++.+.+...... ...+ ..+...++.+.++++.+. +.++|++||++|+
T Consensus 38 dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~-~~~~---~~~~~~~l~~~l~~~~~~---~~~~~~~sGseA~ 110 (403)
T PRK05093 38 QGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHI-SNVF---TNEPALRLAKKLIDATFA---ERVFFANSGAEAN 110 (403)
T ss_pred CCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcc-cCcc---CCHHHHHHHHHHHhhCCC---CEEEEeCchHHHH
Confidence 34455555433 46778888999999887653111 1111 123346888889888754 5999999999999
Q ss_pred HHHHHHhhcccccCCC-CCCCEEEEeCCcchhHHHHHHHHHH----hcC-----cEEEEEeCCCCCCChHHHHHHHHHHH
Q 012991 112 AIVLQQIGRGFTEGRF-HRNDTVLMLHCAFQAVKKSIQAYVT----RAG-----GSVVEVQLPFPLASEEEIINEFKKGI 181 (452)
Q Consensus 112 ~~~~~~l~~~~~~~~~-~~g~~Vl~~~~~~~s~~~~~~~~a~----~~g-----~~v~~~~~~~~~~~~~~~~~~l~~~i 181 (452)
..++.. ++.+..... ...++|+..+..|++.......+.. ..+ .++..+ +.++ .+.+++.+
T Consensus 111 e~a~kl-ar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~d----~~~l~~~l 181 (403)
T PRK05093 111 EAAFKL-ARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHV----PFND----LAAVKAVI 181 (403)
T ss_pred HHHHHH-HHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEe----CCCC----HHHHHHHh
Confidence 999984 444421111 1345788777777764432211100 001 122333 2222 57788888
Q ss_pred hccccCCCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEeccccc-CCcc--c--cccccCccEEEEcCc
Q 012991 182 EKGKKDGKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHAM-GSIK--I--DVKEIGADFYVSNLH 252 (452)
Q Consensus 182 ~~~~~~~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~~-g~~~--~--~~~~~~~d~~~~s~~ 252 (452)
.+++++|+++..+++.|...+ +++|.++|++||+ ++|+|++++. +... . ......+|+. |++
T Consensus 182 ------~~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~-~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~--s~s 252 (403)
T PRK05093 182 ------DDHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNA-LLIFDEVQTGMGRTGDLFAYMHYGVTPDIL--TSA 252 (403)
T ss_pred ------cCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCC-EEEEechhhCCCCCccchhhhhcCCCCCEE--Eec
Confidence 467999999955444454433 8899999999999 8999999872 2111 1 1223346765 556
Q ss_pred ccCcCCCCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q 012991 253 KWFFCPPSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQAL 332 (452)
Q Consensus 253 K~l~g~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~ 332 (452)
|.+.++.-+|+++.++++.+. +..... .. +...+...+.+..++++.+.. +.+.++++++.+
T Consensus 253 K~l~~G~rig~vv~~~~i~~~-l~~~~~----------~~--t~~~~~~~~~aa~a~L~~~~~-----~~~~~~~~~~~~ 314 (403)
T PRK05093 253 KALGGGFPIGAMLTTAEIASH-FKVGTH----------GS--TYGGNPLACAVAEAVFDIINT-----PEVLEGVKARRQ 314 (403)
T ss_pred ccccCCcceEEEEEcHHHHhh-cCCCCC----------CC--CCCCCHHHHHHHHHHHHHHhh-----ccHHHHHHHHHH
Confidence 986543338999998887765 211110 00 012223344445556666542 345677888999
Q ss_pred HHHHHHHHHc-CCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCC
Q 012991 333 KMARMLANAW-GTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGI 411 (452)
Q Consensus 333 ~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~ 411 (452)
++.+.|.++. ...+.......+.++++.++.. ...+..++++.|.++ ||.+.. .
T Consensus 315 ~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~----~~~~~~~~~~~l~~~-Gv~v~~--------------------~ 369 (403)
T PRK05093 315 RFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQ----YKGRARDFLNAAAEE-GVMVLV--------------------A 369 (403)
T ss_pred HHHHHHHHHHhhCCCeEeEeeCceEEEEEecCc----chhHHHHHHHHHHHC-CeEEec--------------------C
Confidence 9999998762 1222222222356777776520 011456788888775 999852 1
Q ss_pred ccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 412 ITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 412 ~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
..+++|++++...++++|+.++++|++++.
T Consensus 370 g~~~lRl~~~~~~~~~~i~~~~~~l~~~l~ 399 (403)
T PRK05093 370 GPDVLRFAPSLVIEEADIDEGLARFEKAVA 399 (403)
T ss_pred CCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 136899998888899999999999999875
No 288
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.82 E-value=1.1e-17 Score=165.82 Aligned_cols=332 Identities=12% Similarity=0.107 Sum_probs=208.9
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|..++.|.+++.+.+...... . .+...+...++.++|++++..+ .+.++|++|||+|++.++. ++|.+..
T Consensus 88 ~lGh~hp~v~~Av~~ql~~l~~~-~---~~~~~~~~~~lAe~L~~~~p~~-~~~v~f~~SGsEA~e~Alk-lAr~~t~-- 159 (442)
T TIGR03372 88 NVGHRNPNVIAAVENQLAKQPLH-S---QELLDPLRALLAKTLAALTPGK-LKYSFFCNSGTESVEAALK-LAKAYQS-- 159 (442)
T ss_pred hcCCCCHHHHHHHHHHHHhCCCc-c---cccCCHHHHHHHHHHHHhCCCC-cCEEEEeCCchHHHHHHHH-HHHHHHh--
Confidence 46778888999999988654211 1 1222455677888888887653 3678999999999999998 5555521
Q ss_pred CCCCCEEEEeCCcchhHHHHHHHHHHhc----C-----cEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEe
Q 012991 127 FHRNDTVLMLHCAFQAVKKSIQAYVTRA----G-----GSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIID 197 (452)
Q Consensus 127 ~~~g~~Vl~~~~~~~s~~~~~~~~a~~~----g-----~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~ 197 (452)
.+.+.+|+.....|++.......+.... + ..+..+ |..+ .+.+++.+++......++.+|+++
T Consensus 160 ~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~----p~~d----~~~~~~~l~~~~~~~~~vAavIvE 231 (442)
T TIGR03372 160 PRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHV----AFGD----IEAMLKALNECKKTGDDVAAIILE 231 (442)
T ss_pred hcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEe----CCCC----HHHHHHHHHHHhcCCCcEEEEEEe
Confidence 0234689998888888654432211100 0 112223 2222 344444443211124678999999
Q ss_pred ccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEEEEcCcccCcCC-CCcEEEEEe
Q 012991 198 HITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLHKWFFCP-PSVAFLYCR 267 (452)
Q Consensus 198 ~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~l~g~-~G~G~l~~~ 267 (452)
......|.+.| ++++.++|++||+ ++|+|+++. +|-.. .+.....+|++++ .|.++++ ..+|.++++
T Consensus 232 pv~g~gG~~~p~~~yl~~l~~lc~~~g~-llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~--gK~lg~G~~Pigavv~~ 308 (442)
T TIGR03372 232 PIQGEGGVILPPEGYLPAVRALCDEFGA-LLILDEVQTGMGRTGKMFACEHEGVQPDILCL--AKALGGGVMPIGATIAT 308 (442)
T ss_pred CccCCCCcccCCHHHHHHHHHHHHHcCC-EEEEeecccCCCccccchhhhhcCCCCCeeee--hhhhcCCcccceEEEec
Confidence 99988999888 8999999999999 999999984 44322 1222335898875 5988765 246888888
Q ss_pred cCccccCCC-CCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcC-CC
Q 012991 268 KSILSSDMH-HPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWG-TS 345 (452)
Q Consensus 268 ~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~-~~ 345 (452)
+++.+. +. .++. ...++.| +..+..+..++++.+.+ +.+.++.+++.+++.+.|.++.. ..
T Consensus 309 ~~i~~~-~~~~~~~---------~~~T~~g--np~~~Aaa~a~L~~i~~-----~~l~~~~~~~G~~l~~~L~~l~~~~~ 371 (442)
T TIGR03372 309 EAVFSV-LFDNPFL---------HTTTFGG--NPLACAAALATINELLE-----KNLPAQAAIKGDFLLDGFQQLAAEYP 371 (442)
T ss_pred HHHHHh-hhccCcc---------ccCCCCC--CHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 777664 21 1100 0111111 22233344445666653 34667788888888888876521 21
Q ss_pred -cCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccC
Q 012991 346 -LGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYN 424 (452)
Q Consensus 346 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~ 424 (452)
........+.++.+.+. +......+.+.|.++ ||.+.... ...+.+|+.++...
T Consensus 372 ~~i~~vRG~Gl~~giel~------~~~~~~~i~~~l~~~-Gvl~~~~~------------------~~~~~lr~~Ppl~~ 426 (442)
T TIGR03372 372 DLIIEARGKGLLMAIEFR------DNEIGYAFAKELFQQ-NILVAGTL------------------NNAKSIRIEPPLTI 426 (442)
T ss_pred CceEEEecceEEEEEEeC------ChHHHHHHHHHHHHC-CcEEeecC------------------CCCCEEEEECCccc
Confidence 22222234667777664 122346788888774 99984211 12368999999999
Q ss_pred CHHHHHHHHHHHHHH
Q 012991 425 TLEDYEKFRDAVILL 439 (452)
Q Consensus 425 t~~di~~l~~~l~~~ 439 (452)
|.+|++++++++.+.
T Consensus 427 t~~~id~~~~~l~~~ 441 (442)
T TIGR03372 427 TIEQCALVIKAAKDA 441 (442)
T ss_pred CHHHHHHHHHHHHHh
Confidence 999999999999875
No 289
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.82 E-value=6.6e-18 Score=159.22 Aligned_cols=318 Identities=16% Similarity=0.094 Sum_probs=219.7
Q ss_pred hhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCC--CCEEEEeCCcchhHHHHHHHHHHh
Q 012991 76 NSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHR--NDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 76 ~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~--g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
.....+..++-..++.+|+.+..+.-.-|+|+|+++.++.....-...+ .++ ..+++++...| .+|..+++.
T Consensus 116 p~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~--~k~I~~p~iv~~~~v~----~a~eK~a~y 189 (491)
T KOG1383|consen 116 PVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKA--QKGIDKPNIVTPQNVH----AAFEKAARY 189 (491)
T ss_pred chhHHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHh--ccCCCCccccchHHHH----HHHHHHHhh
Confidence 3446677889999999999983233366889999955444432111100 011 13566655555 456666777
Q ss_pred cCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHH-cCCCEEEEecccc
Q 012991 154 AGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRD-EGVDQVFVDAAHA 231 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~-~~~~~~ivD~a~~ 231 (452)
.+.+++.+++. . .+..+ +..+..++ +++|..++.+.++.|+|.+.|+++|.++..+ +++ ++++|++.+
T Consensus 190 f~v~l~~V~~~--~-~~~~~D~~k~~~~i------~eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~i-piHvDa~~G 259 (491)
T KOG1383|consen 190 FEVELREVPLD--E-GDYRVDPGKVVRMI------DENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDI-PIHVDACLG 259 (491)
T ss_pred EEEEEEeeecc--c-cceEecHHHHHHHh------ccceEEEEEEcCCCCccchhhHHHHHHHHHHHhCC-ceeecccCc
Confidence 89999999652 1 34444 88999999 7899999999999999999999999999988 999 699999876
Q ss_pred cCCc--------cccccccCccEEEEcCcccCcCCCCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCcccc
Q 012991 232 MGSI--------KIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQ 303 (452)
Q Consensus 232 ~g~~--------~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (452)
.... ++|+...++-.++++.||+-+.|.|+|+++.+.+-... ..-++..++.++.....+.-|+.....+
T Consensus 260 gFi~p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~--~q~~~~~~w~Gg~y~s~TlngSR~g~~v 337 (491)
T KOG1383|consen 260 GFINPAGYLNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLP--HQLFFHTDWLGGIYASPTLNGSRPGSQV 337 (491)
T ss_pred cccccccccCccccccCCCCceeEeeccceeeeeecCcEEEEEccccccc--ceEEEeccccCccccCcccccCCcccHH
Confidence 5444 44666566778999999988889999877776544432 1222233444443333333456666666
Q ss_pred ccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhh
Q 012991 304 LVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVR 383 (452)
Q Consensus 304 ~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 383 (452)
+++++++-.+.. +|..+..+++.+.++.+++.++++.++.+++++. ++|.+.+. ...+..++.+.|.+
T Consensus 338 a~~wa~~~~lG~--eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~-----vs~~~~~s----~~~~i~elsd~l~~- 405 (491)
T KOG1383|consen 338 AAQWAALMSLGE--EGYRENTQNIVETARKLREGIENIKGIKIVGKPL-----VSFILFGS----NDVNIFELSDLLRK- 405 (491)
T ss_pred HHHHHHHHHhhH--HHHHHHHHHHHHHHHHHHHhhhccccceecCCCc-----EEEEEccC----CccchhhhhHHHHh-
Confidence 666666554443 3788888889999999999999998899888754 44444321 34677899999976
Q ss_pred cceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHH-HHHHHHHHHHHHhc
Q 012991 384 FGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLED-YEKFRDAVILLVEE 442 (452)
Q Consensus 384 ~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~d-i~~l~~~l~~~~~~ 442 (452)
+|+.++....+ ..+.+++.--+..++ .++++..+++++++
T Consensus 406 ~GW~lnalq~P-------------------~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~e 446 (491)
T KOG1383|consen 406 KGWILNALQFP-------------------AAIHICVTRVHAREDVADRFVADIRKVVEE 446 (491)
T ss_pred cCcCccccCCC-------------------CceEEEEEeeeccHHHHHHHHHHHHHHHHH
Confidence 59998754433 356666654445555 67788888777754
No 290
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.82 E-value=5.7e-18 Score=150.62 Aligned_cols=353 Identities=13% Similarity=0.082 Sum_probs=209.1
Q ss_pred CCCeEEeccCCCCCCcHHHHHHHHHHHHHHhcCCchh---hhhhhhHHHHHHHHHHHhHh----CCC-CCCcEEEecChh
Q 012991 37 QHGVARINNGSFGSCPKSVLADQQKWQLKFLQQPDDF---YFNSLRKGILESRAAVKDLI----NAD-DVGEISLVDNAT 108 (452)
Q Consensus 37 ~~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~la~~~----~~~-~~~~i~~t~g~t 108 (452)
..+.+.|..|.+...|. +.+..+............. -.|...++...+.+++++++ |-. ...+|.+|+|+.
T Consensus 29 t~g~imLggGNPa~iPe-m~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQ 107 (417)
T COG3977 29 TPGAIMLGGGNPARIPE-MDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQ 107 (417)
T ss_pred CCCceeeCCCCcccChh-HHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCcc
Confidence 46689999888888887 8888777766654444221 12444555555566666554 322 267999999999
Q ss_pred HHHHHHHHHhhcccccCCCCCC--CEEEEe-CCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH--HHHHHHH-Hh
Q 012991 109 TAAAIVLQQIGRGFTEGRFHRN--DTVLML-HCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI--INEFKKG-IE 182 (452)
Q Consensus 109 ~a~~~~~~~l~~~~~~~~~~~g--~~Vl~~-~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~--~~~l~~~-i~ 182 (452)
.+...++..++-+. ..| ++|+.+ .|+|.+...+--. +--++.+.+.......+.+ --++++. +
T Consensus 108 s~fFYlfNlF~G~~-----sdG~~k~illPLaPeYiGY~d~~l~-----~d~fVs~kP~iel~~~g~FKY~vDF~~l~i- 176 (417)
T COG3977 108 SAFFYLFNLFAGRR-----SDGTEKKILLPLAPEYIGYADAGLE-----EDLFVSAKPNIELLPAGQFKYHVDFEHLHI- 176 (417)
T ss_pred chHHHHHHHhcCcc-----CCCcceeEeeccChhhccccccccC-----ccceeeccCCcccccccceeeccCHHHccc-
Confidence 99999998775332 333 467776 8898775322110 1112222211111122222 1222221 2
Q ss_pred ccccCCCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccccCCccccccc----cCcc-EEEEcCccc
Q 012991 183 KGKKDGKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKE----IGAD-FYVSNLHKW 254 (452)
Q Consensus 183 ~~~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~----~~~d-~~~~s~~K~ 254 (452)
++.+.+|+++-|+||||.+.- +.+|.+++++||+ ++++|.|++.+...+-+.. |+.. +.++|.+|
T Consensus 177 -----~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~gi-PliIDnAYg~PFP~iifsd~~~~w~~NiilC~SLSK- 249 (417)
T COG3977 177 -----GESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGI-PLIIDNAYGVPFPGIIFSDATPLWNENIILCMSLSK- 249 (417)
T ss_pred -----ccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCC-cEEEecccCCCCCceecccccccCCCCEEEEeehhh-
Confidence 678999999999999999974 5567778999999 6999999987654433322 2333 56779999
Q ss_pred CcCCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHh---hcCHHHHHHHHHH
Q 012991 255 FFCPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRF---EGGIDGIMQRNHE 329 (452)
Q Consensus 255 l~g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~---~~g~~~~~~~~~~ 329 (452)
.|.+| +|+++.+++++.. ..... ..... . ..-++.+.+.+.+++- ....+-++-.++.
T Consensus 250 -~GLPG~R~GIiIane~viqa--itnmn---~iisL-------a----p~~~G~Aia~~mie~gdl~rlseqVIrPFY~~ 312 (417)
T COG3977 250 -LGLPGSRCGIIIANEKVIQA--ITNMN---GIISL-------A----PGRMGPAIAAEMIESGDLLRLSEQVIRPFYRN 312 (417)
T ss_pred -cCCCCcceeEEEccHHHHHH--HHhcc---ceeee-------c----CCCccHHHHHHHhhcchHHHHHHHhhhHHHHH
Confidence 45555 8999999988875 11110 00000 0 0111222233333320 0012223333444
Q ss_pred HHHHHHHHHHHH-c--CCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeeccc-CCCCCCCCCCCC
Q 012991 330 QALKMARMLANA-W--GTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQ-APKDDGQPQAGA 405 (452)
Q Consensus 330 ~~~~l~~~L~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~-~~~~~~~~~~~~ 405 (452)
..+.....|+.. + .+.+-.|++ ..|.|.++.+ -..+..++++.|.++ |+.+.+++. +++.+
T Consensus 313 ~~q~~~~~l~~~lp~~~~~iHkpEG--AIFlWLWf~d-----LPItt~~LYq~LKa~-Gvl~VPG~~FFpGl~------- 377 (417)
T COG3977 313 RVQTTIAILRRYLPEYRCLIHKPEG--AIFLWLWFKD-----LPITTEELYQRLKAR-GVLMVPGHYFFPGLD------- 377 (417)
T ss_pred HHHHHHHHHHHhcCccceeeecCCc--ceeehhhhcc-----CCCCHHHHHHHHHhC-eEEEecccccCCCCC-------
Confidence 444444444432 2 234445554 5566665542 246788999999775 988765544 44321
Q ss_pred CCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhcc
Q 012991 406 RDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEEG 443 (452)
Q Consensus 406 ~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~~ 443 (452)
+--....+|+|++... +.+.|++-+.+|.+.+++.
T Consensus 378 -~ewpH~hqC~Rmn~~~--~~~~ie~Gva~lae~ve~~ 412 (417)
T COG3977 378 -KEWPHTHQCMRMNYVP--EPEKIEKGVAILAEEVERA 412 (417)
T ss_pred -CCCCCccceEEEecCC--CHHHHHHHHHHHHHHHHHH
Confidence 0012456799999976 7888999999988887654
No 291
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.82 E-value=2.3e-18 Score=158.63 Aligned_cols=346 Identities=16% Similarity=0.146 Sum_probs=231.1
Q ss_pred CeEEeccCCCCCCcHHHHHHHHHHHHHHhcCCch-----hhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEec-ChhHHHH
Q 012991 39 GVARINNGSFGSCPKSVLADQQKWQLKFLQQPDD-----FYFNSLRKGILESRAAVKDLINADDVGEISLVD-NATTAAA 112 (452)
Q Consensus 39 ~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~-g~t~a~~ 112 (452)
.+.+|+.| +...|++|++..+.-+..+.+.+.+ +.+..+.+...++++.+++++++|+.-.|+|.. |+|..+.
T Consensus 5 ~~~nFsaG-Pa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~ 83 (365)
T COG1932 5 RVYNFSAG-PAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFA 83 (365)
T ss_pred CCCCCCCC-cccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHHH
Confidence 45677754 5666777888888877777664433 345677888999999999999999777888876 5778888
Q ss_pred HHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH--HHHHHHHHhccccCCCc
Q 012991 113 IVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI--INEFKKGIEKGKKDGKM 190 (452)
Q Consensus 113 ~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~--~~~l~~~i~~~~~~~~~ 190 (452)
.+..+|. ..+..=.+....|.+....+ |...+..+.........++.+.+ .+... + .++
T Consensus 84 ~~p~nLl--------~~~~~~yv~~g~Ws~~a~~e---A~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~------~~~ 144 (365)
T COG1932 84 MAPMNLL--------GKRGTDYVDTGAWSEFAIKE---AKKVGKQPKLIDARIEEAGYGSIPDLSKWD--F------SDN 144 (365)
T ss_pred HHHHhhh--------cccCceeEeeeehhHhHHHH---HHHhcccccccccceeccCccCCCChhhcc--c------CCC
Confidence 8888873 33322033344444432333 45555433332211011122222 22211 2 233
Q ss_pred eEEEEEeccCCCCcccccH-HHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEEecC
Q 012991 191 IRLAIIDHITSMPCVVIPV-RKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKS 269 (452)
Q Consensus 191 ~~lv~~~~~~n~tG~~~~l-~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~ 269 (452)
..-|.+|+.++.+|+.++- +.+. .+ . ++++|.++.++..++|+.+ .|++.++.+|. .||.|+++++++++
T Consensus 145 ~ayv~~~~NeTi~Gv~v~~~p~~~---~~--~-~~v~D~SS~ilsr~iDvsk--~dviyagaQKn-lGpaGltvvIvr~~ 215 (365)
T COG1932 145 DAYVHFCWNETISGVEVPELPDIG---SD--G-LLVADASSAILSRPIDVSK--YDVIYAGAQKN-LGPAGLTVVIVRPD 215 (365)
T ss_pred ccEEEEecCCcccceEccCCCCCC---CC--c-eEEEecccHHhcCCCChhH--cceEEEehhhc-cCccceEEEEEcHH
Confidence 5558999999999998772 3331 11 6 6999999999999999986 48999999996 89999999999999
Q ss_pred ccccCCCCCc-eec--cCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-
Q 012991 270 ILSSDMHHPV-VSH--EFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS- 345 (452)
Q Consensus 270 ~~~~~l~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~- 345 (452)
++.+ + ..+ ... .|-. ...+.....||+...++-+..+++|+.+ .+|++++.++.++.++.|++.+.+.+-+.
T Consensus 216 ~l~r-~-~~~~~P~if~y~~-~~~~~s~yNTPptfa~y~~~lv~~Wlk~-~GGl~~~~~rn~~ka~~LY~~id~s~fy~~ 291 (365)
T COG1932 216 LLER-A-ESYTLPSIFDYLT-HADNGSMYNTPPTFAWYLLGLVFKWLKS-QGGLEALEARNQAKAQLLYDWIDKSDFYRN 291 (365)
T ss_pred HHhc-c-cccCCchHhhchh-hhccCCccCCcHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 9987 2 111 100 1111 1122233478888888889999999998 58999999999999999999999873222
Q ss_pred cCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCC
Q 012991 346 LGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNT 425 (452)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t 425 (452)
...+......-++|.+.+ ...+. .+...+.++ |+..-.++.. .+.+|+|+.....
T Consensus 292 ~v~~~~RS~mnV~f~~~~-----~~ld~-~fv~eae~~-gl~~lkGhr~------------------vgGmRasiynA~~ 346 (365)
T COG1932 292 LVAKANRSRMNVTFTLVD-----AELDK-GFVAEAEAA-GLIYLKGHRS------------------VGGLRASIYNAVP 346 (365)
T ss_pred ccchhhccceeEEEEcCc-----HHHHH-HHHHHHHHc-CCceeccccC------------------CCceeeeeecCCC
Confidence 333332333446777752 23444 444554444 7665545332 3459999998889
Q ss_pred HHHHHHHHHHHHHHHhc
Q 012991 426 LEDYEKFRDAVILLVEE 442 (452)
Q Consensus 426 ~~di~~l~~~l~~~~~~ 442 (452)
.++|+.|++.|+.+.++
T Consensus 347 ~e~veaL~~fm~~f~~~ 363 (365)
T COG1932 347 LEDVEALTDFMDWFEET 363 (365)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999988764
No 292
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.82 E-value=1.2e-17 Score=164.30 Aligned_cols=328 Identities=14% Similarity=0.123 Sum_probs=194.9
Q ss_pred CCCCeEEeccC----CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHH
Q 012991 36 HQHGVARINNG----SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAA 111 (452)
Q Consensus 36 ~~~~~~~l~~~----~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~ 111 (452)
.++.++.+..+ ..++ .+.+.+++.+.+.....++.. ...+.++.+++.+.......++|++|||+|+
T Consensus 27 dg~~~lD~~s~~~~~~lG~-~p~v~~a~~~~~~~~~~~~~~--------~~~~~~~~la~~l~~~~~~~~~~~~SGseA~ 97 (375)
T PRK04260 27 DGKKYLDFSSGIGVTNLGF-HPQVQQALQKQAGLIWHSPNL--------YLNSLQEEVAQKLIGDKDYLAFFCNSGAEAN 97 (375)
T ss_pred CCCEEEECCCCcccccCCC-CHHHHHHHHHHHHhcCcccCc--------cCCHHHHHHHHHHhcCcCCEEEEcCccHHHH
Confidence 34445555333 2467 455999999887654222211 2344566677655433123468999999999
Q ss_pred HHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh------cCcEEEEEeCCCCCCChHHHHHHHHHHHhccc
Q 012991 112 AIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR------AGGSVVEVQLPFPLASEEEIINEFKKGIEKGK 185 (452)
Q Consensus 112 ~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~------~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~ 185 (452)
..++... +. ..++++|++.+..|++.......++.. .+..+..++.. +.+ ..+.+++.+
T Consensus 98 ~~Al~~a-r~-----~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----dl~~l~~~l---- 162 (375)
T PRK04260 98 EAAIKIA-RK-----ATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA-IFN----DLNSVKALV---- 162 (375)
T ss_pred HHHHHHH-HH-----hcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe-CCC----CHHHHHHhc----
Confidence 9888865 22 245678888877766533222111110 00000001000 111 167788877
Q ss_pred cCCCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCc--cc--cccccCccEEEEcCcccCc
Q 012991 186 KDGKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSI--KI--DVKEIGADFYVSNLHKWFF 256 (452)
Q Consensus 186 ~~~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~--~~--~~~~~~~d~~~~s~~K~l~ 256 (452)
.+++++|+++.+++++|.+.+ +++|.++|+++|+ ++|+|+++. +|.. .. ......+|++ +++|.+.
T Consensus 163 --~~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~-~~i~De~~~g~g~~g~~~~~~~~~~~pdi~--t~sK~l~ 237 (375)
T PRK04260 163 --NKNTAAVMLELVQGESGVLPADKDFVKALADYCQETGI-LLIVDEVQTGMGRTGKLYAFEHYGIEPDIF--TLAKGLA 237 (375)
T ss_pred --CCCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCC-EEEEechhhCCCcccchhhhHhhCCCCCEE--Eeccccc
Confidence 457899999999999999865 7999999999999 899999985 2211 11 1223457866 5679876
Q ss_pred CCCCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 012991 257 CPPSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMAR 336 (452)
Q Consensus 257 g~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~ 336 (452)
++.-+|++++++++... +.... .... ...+...+.+..++++.+. .+.+.++.++..+++++
T Consensus 238 ~G~~ig~~~~~~~~~~~-~~~~~----------~~~t--~~~~~~~~~aa~a~l~~~~-----~~~~~~~~~~~~~~~~~ 299 (375)
T PRK04260 238 NGVPVGAMLAKSSLGGA-FGYGS----------HGST--FGGNKLSMAAASATLDIML-----TAGFLEQALENGNYLQE 299 (375)
T ss_pred CCcceEEEEEcHHHHhh-cCCCC----------CCCC--CCcCHHHHHHHHHHHHHHH-----hhHHHHHHHHHHHHHHH
Confidence 43347999998877664 21110 0000 1112223333333444433 23455666666777777
Q ss_pred HHHHHcC-CCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccce
Q 012991 337 MLANAWG-TSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGY 415 (452)
Q Consensus 337 ~L~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (452)
.|.+... ..........+.++++.++ .+..++.+.|.+ .||.+.+ ...+.
T Consensus 300 ~l~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~~~~~~l~~-~Gi~v~~--------------------~~~~~ 350 (375)
T PRK04260 300 QLQKALQDKETVTTVRGLGYMIGIETT--------ADLSQLVEAARD-KGLIVLT--------------------AGTNV 350 (375)
T ss_pred HHHHHHhhCCCeeEEeccceEEEEEec--------CcHHHHHHHHHh-CCCEEec--------------------CCCCE
Confidence 6665421 1111111123677777663 245678899876 4999842 12368
Q ss_pred EEecccccCCHHHHHHHHHHHHHH
Q 012991 416 ARISHQVYNTLEDYEKFRDAVILL 439 (452)
Q Consensus 416 iRis~~~~~t~~di~~l~~~l~~~ 439 (452)
+|++++...+.+||++++++|+++
T Consensus 351 lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 351 IRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred EEEcCCCccCHHHHHHHHHHHHHh
Confidence 999998888999999999999875
No 293
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.82 E-value=5.2e-17 Score=161.00 Aligned_cols=340 Identities=14% Similarity=0.109 Sum_probs=208.1
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCC--CCCcEEEe-cChhHHHHHHHHHhhcccc
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINAD--DVGEISLV-DNATTAAAIVLQQIGRGFT 123 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~--~~~~i~~t-~g~t~a~~~~~~~l~~~~~ 123 (452)
..|..++.|.+++.+.+.... .... .....+...++.+++++.+..+ ..+.++|+ +||++|++.++.. +|.+
T Consensus 48 ~lGh~~p~v~~ai~~ql~~~~-~~~~--~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~Alkl-Ar~~- 122 (412)
T TIGR02407 48 NYGHNNPKLKQALIDYLADDG-IIHS--LDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKL-ARKV- 122 (412)
T ss_pred cCCCCCHHHHHHHHHHHhhcc-ceec--cccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHH-Hhhh-
Confidence 356788889999998876421 1111 1112344566777777764222 11356664 8999999999984 4443
Q ss_pred cCCCCCCCEEEEeCCcchhHHHHHHHHHHh------cC---cEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEE
Q 012991 124 EGRFHRNDTVLMLHCAFQAVKKSIQAYVTR------AG---GSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLA 194 (452)
Q Consensus 124 ~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~------~g---~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv 194 (452)
..+.+|+.....||+.......+... .+ ..+..+|.+.........++.+++.+++.....+++++|
T Consensus 123 ----tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aav 198 (412)
T TIGR02407 123 ----TGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAV 198 (412)
T ss_pred ----cCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEE
Confidence 34568999898888865544332110 01 122333221000000122667888775432212468999
Q ss_pred EEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCc----cccccccCccEEEEcCcccCcC-CCCcEEE
Q 012991 195 IIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSI----KIDVKEIGADFYVSNLHKWFFC-PPSVAFL 264 (452)
Q Consensus 195 ~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~----~~~~~~~~~d~~~~s~~K~l~g-~~G~G~l 264 (452)
+++...++.|.+.+ +++|.++|++||+ ++|+|++++ +|-. ..+.....+|++++| |++.+ ..-+|++
T Consensus 199 i~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~-llI~DEV~tG~GRtG~~~a~~~~~v~PDi~~~~--K~lg~~G~pigav 275 (412)
T TIGR02407 199 ILETVQGEGGINVASDEWLQRLEKLCRRHDI-LLIVDDIQAGCGRTGTFFSFEPAGIEPDIVCLS--KSISGYGLPLALT 275 (412)
T ss_pred EeccccCCCCCccCCHHHHHHHHHHHHHcCC-EEEEechhhCCCccchhHHhcccCCCCCEEEec--hhccCCccceeEE
Confidence 99999999998643 7789999999999 899999986 4322 223334578988765 98764 4448999
Q ss_pred EEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHH-HHHhhcCHHHHHHHHHHHHHHHHHHHHHHcC
Q 012991 265 YCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTF-VSRFEGGIDGIMQRNHEQALKMARMLANAWG 343 (452)
Q Consensus 265 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~ 343 (452)
+++++. .. + .+.. ...++ +.+..+..+..++++. +. .+.+.++++++.+++.+.|..+..
T Consensus 276 ~~~~~~-~~-~-~~~~---------~~~T~--~gnpl~~aaa~a~l~~~i~-----~~~l~~~~~~~g~~l~~~l~~l~~ 336 (412)
T TIGR02407 276 LIKPEL-DV-W-KPGE---------HNGTF--RGNNLAFVTATAALEYYWS-----DDAFEKAVQRKSEIIQERLDRIVA 336 (412)
T ss_pred EEchhh-hc-c-CCCc---------cCCCC--CccHHHHHHHHHHHHHHhc-----ccHHHHHHHHHHHHHHHHHHHHHh
Confidence 998775 43 1 1110 00111 1222222333445553 33 245677788888888888775421
Q ss_pred -CC-cCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEeccc
Q 012991 344 -TS-LGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQ 421 (452)
Q Consensus 344 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~ 421 (452)
.. +.......+.++++.++ +......+...+.++ ||.+.... ..++.||++++
T Consensus 337 ~~~~~~~~vrg~Gl~~~l~l~------~~~~~~~~~~~~~~~-Gv~v~~~~------------------~~~~~lr~~p~ 391 (412)
T TIGR02407 337 EYPELIKQVRGRGLMQGIECG------DGDLAGKIAKAAFEN-GLIIETSG------------------PNDEVIKLLPP 391 (412)
T ss_pred hCCCceEeeecceeEEEEEec------ChHHHHHHHHHHHHC-CCEEeccC------------------CCCCEEEEECC
Confidence 11 11222234677888886 233456788888764 99985311 22468999999
Q ss_pred ccCCHHHHHHHHHHHHHHHhc
Q 012991 422 VYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 422 ~~~t~~di~~l~~~l~~~~~~ 442 (452)
...|++|++.+++++++.+++
T Consensus 392 l~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 392 LTIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred CCCCHHHHHHHHHHHHHHHhC
Confidence 999999999999999998853
No 294
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.82 E-value=5.3e-17 Score=161.90 Aligned_cols=343 Identities=14% Similarity=0.146 Sum_probs=210.7
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|..++.+.+++.+.+........ .+...+...++-+.|++.++.. .+.++|+++||+|++.++. ++|.+
T Consensus 54 ~lGh~~p~v~~Ai~~ql~~~~~~~~---~~~~~~~~~~la~~L~~~~p~~-~~~v~f~~sGsEAve~Alk-lAr~~---- 124 (443)
T PRK08360 54 NVGHNNPRVVKAIKEQTDKLIHYTP---IYGFPVEPLLLAEKLIEIAPGD-NPKVSFGLSGSDANDGAIK-FARAY---- 124 (443)
T ss_pred ccCCCCHHHHHHHHHHHHhccCccc---cccCcHHHHHHHHHHHHhCCCC-CCEEEEcCCHHHHHHHHHH-HHHHh----
Confidence 4567888899999998875321111 1122345567778888887653 3689999999999999998 55554
Q ss_pred CCCCCEEEEeCCcchhHHHHHHHHHHh-----c--C--cEEEEEeCCCCCC-------ChH--HHHHHHHHHHhccccCC
Q 012991 127 FHRNDTVLMLHCAFQAVKKSIQAYVTR-----A--G--GSVVEVQLPFPLA-------SEE--EIINEFKKGIEKGKKDG 188 (452)
Q Consensus 127 ~~~g~~Vl~~~~~~~s~~~~~~~~a~~-----~--g--~~v~~~~~~~~~~-------~~~--~~~~~l~~~i~~~~~~~ 188 (452)
..+.+|+.....|++.......+... . + ..+..++.+.... .+. ...+.+++.+++.. ..
T Consensus 125 -tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~ 202 (443)
T PRK08360 125 -TKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEV-YA 202 (443)
T ss_pred -cCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhcc-CC
Confidence 34567888888877754332211110 0 0 1233333221000 000 12455666664311 13
Q ss_pred CceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEEEEcCcccCcCCC
Q 012991 189 KMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLHKWFFCPP 259 (452)
Q Consensus 189 ~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~l~g~~ 259 (452)
+++++|+++...+++|.+.+ +++|.++|++||+ ++|+|++++ +|... .......+|++++ +|.+.++.
T Consensus 203 ~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~-llI~DEv~~g~gr~G~~~a~~~~~~~pDiitl--sK~l~~G~ 279 (443)
T PRK08360 203 EGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGI-LLVVDEVQSGLGRTGKWFAIEHFGVEPDIITL--GKPLGGGL 279 (443)
T ss_pred CCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCC-EEEEeccccCCCcCccchhhhhcCCCCCEEEe--cccccCCc
Confidence 67999999988899999876 7789999999999 899999986 33221 1122345788765 69876543
Q ss_pred CcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHH
Q 012991 260 SVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLA 339 (452)
Q Consensus 260 G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~ 339 (452)
.+|++++++++.+. +. .. .+ . .+...+.....+..++++.+.+ +.+.++++++.+++.+.|.
T Consensus 280 pigav~~~~~i~~~-~~-~~-~~--------~--~T~~~~p~~~aaa~a~l~~l~~-----~~l~~~~~~~g~~l~~~L~ 341 (443)
T PRK08360 280 PISATIGRAEIMDS-LP-PL-AH--------A--FTLSGNPVASAAALAVIEEIEE-----KNLLKRAEKLGNYTKKRLE 341 (443)
T ss_pred eeEEEEEcHHHHhh-hc-CC-CC--------C--CCCCcCHHHHHHHHHHHHHHHH-----cCHHHHHHHHHHHHHHHHH
Confidence 47898888877765 21 11 00 0 0111222234444455555553 2467888888889888887
Q ss_pred HHc-CCCcCCCcccccceEEEEcCCc--cccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceE
Q 012991 340 NAW-GTSLGSPPEICAAMVMVGLPSR--LRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYA 416 (452)
Q Consensus 340 ~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i 416 (452)
++. ...++......+.++.+.+.+. ....+......+...|.+ .||.+.. ...+.+
T Consensus 342 ~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~--------------------~~~~~l 400 (443)
T PRK08360 342 EMKKKHELIGDVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWE-LGLIVTF--------------------FSGNVL 400 (443)
T ss_pred HHHHhCCCeeeeeccceEEEEEEecCCcccCccHHHHHHHHHHHHH-CCeEEee--------------------cCCCEE
Confidence 652 2333333323355655554210 000111234567788876 4998742 123689
Q ss_pred EecccccCCHHHHHHHHHHHHHHHhc
Q 012991 417 RISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 417 Ris~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
|++++..+|++||+.+++++.+.+..
T Consensus 401 r~~P~l~~t~~~id~~~~~l~~~l~~ 426 (443)
T PRK08360 401 RIQPPLTIEKEVLDEGLDILEEAIED 426 (443)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998864
No 295
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.80 E-value=3.8e-17 Score=152.77 Aligned_cols=329 Identities=21% Similarity=0.261 Sum_probs=219.4
Q ss_pred hhhhHHHHHHHHHHHhHhCCCCCCcEEEe-cChhHHHHHHHHHhhcccccCCCC-CCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 76 NSLRKGILESRAAVKDLINADDVGEISLV-DNATTAAAIVLQQIGRGFTEGRFH-RNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 76 ~~~~~~~~~~~~~la~~~~~~~~~~i~~t-~g~t~a~~~~~~~l~~~~~~~~~~-~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
.+..+++.+++++|++..|.+ .|.+. +.|+++=.+-+. +.|+|-+..-. .++.|++++..|..|..... .
T Consensus 105 qG~l~li~~Lq~~L~~ITG~D---avsLQP~AGAqGE~aGll-~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAa----m 176 (496)
T COG1003 105 QGYLELIYELQEWLKEITGMD---AVSLQPNAGAQGEYAGLL-AIRAYHESRGEGHRNICLIPDSAHGTNPASAA----M 176 (496)
T ss_pred HHHHHHHHHHHHHHHHhcCCc---eeeccCCCCcchhhHHHH-HHHHHHHHcCCCcCcEEEeeccccCCChhhHh----h
Confidence 566788999999999999985 55544 456555343333 33444322212 34689999999999876654 4
Q ss_pred cCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccc-cHHHHHHHHHHcCCCEEEEecccc
Q 012991 154 AGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVI-PVRKLVKICRDEGVDQVFVDAAHA 231 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~-~l~~i~~l~~~~~~~~~ivD~a~~ 231 (452)
.|.+|+.+ +.++++.+ +++|++.+ +++++++++++|++ .|.+- ++.+|+++.|++|. .+..|||.-
T Consensus 177 ~G~~VV~V----~~~~~G~VDlddLk~k~------~~~~AalMiTnPsT-~GvFE~~I~ei~~ivH~~Gg-~vY~DGANl 244 (496)
T COG1003 177 AGFKVVVV----KCDENGNVDLDDLRAKA------EDNLAALMITNPST-LGVFEEDIREICEIVHEAGG-QVYYDGANL 244 (496)
T ss_pred cCceEEEE----ecCCCCCccHHHHHHHh------ccceeEEEeccCcc-cccchhhHHHHHHHHHHcCC-EEEecCcch
Confidence 69999999 66777887 99999999 68999999999987 68874 69999999999999 899999853
Q ss_pred cCCcc-ccccccCccEEEEcCcccCcCCC-----CcEEEEEecCccccCCCCCceeccCCC---Ccc-cccccccccCcc
Q 012991 232 MGSIK-IDVKEIGADFYVSNLHKWFFCPP-----SVAFLYCRKSILSSDMHHPVVSHEFGN---GLP-IESAWIGTRDYS 301 (452)
Q Consensus 232 ~g~~~-~~~~~~~~d~~~~s~~K~l~g~~-----G~G~l~~~~~~~~~~l~~~~~~~~~~~---~~~-~~~~~~~~~~~~ 301 (452)
-..+. .....+|+|++-+++||+|+.|+ |.|-+.++..+... +-.|...+..+. ... ....-.....+.
T Consensus 245 NA~vG~~rPGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pf-LP~p~~~~~~~~y~~~~~~~~s~g~~~a~~G 323 (496)
T COG1003 245 NAIVGLARPGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPF-LPGPVVYHDVGEYRLDYDGKKSIGVSAAPYG 323 (496)
T ss_pred hhhhccccccccccceEEeecccccccCCCCCCCCCCceehHhhcccc-CCCCcccCCCccccccCCCCccceeeccccC
Confidence 32222 12334589999999999986554 47788888777764 322221011110 000 000000112222
Q ss_pred ccccHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcc-cccceEEEEcCCccccCChhhHHHHHHH
Q 012991 302 AQLVIPSAVTFVSRF-EGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPE-ICAAMVMVGLPSRLRVMGEDDALRLRGH 379 (452)
Q Consensus 302 ~~~~~~~al~~~~~~-~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 379 (452)
+...+..+..++... ..|++..-+...-+++|+.+.|+. .+++...+. .+..-+.+.... +....+.+..++++.
T Consensus 324 s~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~--~y~~~y~~~~~~~HE~ild~r~-l~~~~Gv~~~DvAKr 400 (496)
T COG1003 324 SASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKG--YYPVPYTGENRVAHECILDARP-LKKETGVRALDVAKR 400 (496)
T ss_pred cchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh--cCccccCCCCcceeEEEeechH-hHhhcCCcHHHHHHH
Confidence 222233334333332 136777777788899999999986 344432222 223333333321 122346788999999
Q ss_pred HhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhccc
Q 012991 380 LRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEEGQ 444 (452)
Q Consensus 380 L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~~~ 444 (452)
|.. +|+..|+.+++ ....+.+-|-+.-..+.+++|+++++|.++.++..
T Consensus 401 LlD-~GfHaPT~~FP---------------liV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~ 449 (496)
T COG1003 401 LLD-YGFHAPTMYFP---------------LIVAGTLMIEPTESESKEELDRFIDAMIAIREEAD 449 (496)
T ss_pred HHh-cCCCCCcccCc---------------cccccceeecCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 975 79999988876 23457899998887889999999999999987654
No 296
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.80 E-value=2.3e-16 Score=157.39 Aligned_cols=343 Identities=12% Similarity=0.082 Sum_probs=207.6
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|...+.+.+++.+.+.... .... .....+...++.++|++.+..+..+.+.|++|||+|++.++.. +|.+
T Consensus 67 ~lGh~~p~v~~Ai~~ql~~~~-~~~~--~~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~Alkl-Ar~~---- 138 (441)
T PRK05769 67 NVGHAHPKVVKAVKEQAEKFL-HYSL--TDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKI-ARYH---- 138 (441)
T ss_pred ccCCCCHHHHHHHHHHHHhcc-CccC--cccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHH-HHHH----
Confidence 356777889999999886531 1111 1112345677888888887532136899999999999999984 4443
Q ss_pred CCCCCEEEEeCCcchhHHHHHHHHHHh-c---------CcEEEEEeCCC----CCC--C---hHH-HHHHHHHHHhcccc
Q 012991 127 FHRNDTVLMLHCAFQAVKKSIQAYVTR-A---------GGSVVEVQLPF----PLA--S---EEE-IINEFKKGIEKGKK 186 (452)
Q Consensus 127 ~~~g~~Vl~~~~~~~s~~~~~~~~a~~-~---------g~~v~~~~~~~----~~~--~---~~~-~~~~l~~~i~~~~~ 186 (452)
..+.+|+....+|++.......+... . ...+..++.+. +.+ + +.. ..+.+++.+.+...
T Consensus 139 -tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~ 217 (441)
T PRK05769 139 -TGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLV 217 (441)
T ss_pred -hCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhcc
Confidence 34568998888888865443322100 0 01123333211 001 0 111 14556663321101
Q ss_pred CCCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc--c--cccccCccEEEEcCcccCcC
Q 012991 187 DGKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK--I--DVKEIGADFYVSNLHKWFFC 257 (452)
Q Consensus 187 ~~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~--~--~~~~~~~d~~~~s~~K~l~g 257 (452)
...++.+|+++......|.+.| +++|.++|++||+ ++|+|++++ +|... + ......+|++++| |.+++
T Consensus 218 ~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~-lli~DEv~tG~gr~G~~~a~~~~gv~pDivt~~--K~l~~ 294 (441)
T PRK05769 218 PPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGI-LLIDDEVQTGMGRTGKMFAIEHFGVEPDIITLA--KAIAG 294 (441)
T ss_pred CCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCC-EEEEechhhCCCcccceehhhccCCCCCEEEEc--ccccC
Confidence 1357899999999998999988 9999999999999 899999987 33222 1 1112357988754 88776
Q ss_pred CCCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Q 012991 258 PPSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARM 337 (452)
Q Consensus 258 ~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~ 337 (452)
+..+|++++++++... .... ...++.+ +.....+..++++.+. . .+.++.+++.++|.+.
T Consensus 295 G~p~gav~~~~~i~~~--~~~~----------~~~T~~g--~p~~~aaa~a~L~~l~-----~-~~~~~~~~~g~~l~~~ 354 (441)
T PRK05769 295 GLPLGAVIGRAELMFL--PPGS----------HANTFGG--NPVAAAAALATLEELE-----E-GLLENAQKLGEYLRKE 354 (441)
T ss_pred CcccEEEEEehhhhhc--CCCC----------CCCCCCc--CHHHHHHHHHHHHHHH-----H-HHHHHHHHHHHHHHHH
Confidence 5557888888877642 1100 0111112 2222333333444443 2 6678888999999999
Q ss_pred HHHHcC-CCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceE
Q 012991 338 LANAWG-TSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYA 416 (452)
Q Consensus 338 L~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i 416 (452)
|.++.. ..++......+.++.+.+.+.....+......+.+.+.++ ||.+.. ...+.+
T Consensus 355 L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-Gil~~~--------------------~~~~~l 413 (441)
T PRK05769 355 LKELKEKYEFIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAFKR-GLLLLG--------------------AGKSAI 413 (441)
T ss_pred HHHHHHhCCCeeeeecceEEEEEEeccCCccccHHHHHHHHHHHHhC-CcEEec--------------------CCCCEE
Confidence 977632 3333232233556665552110000111235677777664 998842 123689
Q ss_pred EecccccCCHHHHHHHHHHHHHHHhc
Q 012991 417 RISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 417 Ris~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
|+++....|++||+++++++++++..
T Consensus 414 r~~p~l~~t~~~id~~~~~l~~~l~~ 439 (441)
T PRK05769 414 RIIPPLIITEEEADIGLEILEEAIKE 439 (441)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998853
No 297
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.80 E-value=8.1e-18 Score=158.99 Aligned_cols=167 Identities=16% Similarity=0.188 Sum_probs=138.7
Q ss_pred hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 74 YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
|++...+....+++.++++.|+. +++.+++|..|+..++..+ ++.|++|+.....|.....-++.+..+
T Consensus 71 Ysr~~nPt~~~le~~iaal~ga~---~~l~fsSGmaA~~~al~~L--------~~~g~~iV~~~~~Y~gT~~~l~~~~~~ 139 (409)
T KOG0053|consen 71 YSRSGNPTRDVLESGIAALEGAA---HALLFSSGMAAITVALLHL--------LPAGDHIVATGDVYGGTLRILRKFLPK 139 (409)
T ss_pred cccCCCCchHHHHHHHHHHhCCc---eEEEecccHHHHHHHHHHh--------cCCCCcEEEeCCCcccHHHHHHHHHHH
Confidence 44444566788999999999995 5788888888888888876 588999999999999999988888889
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccC
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMG 233 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g 233 (452)
.|++...+++ ++ .+.+++++ .+++++|+++.|+||+..+.|+++|+++||++|+ +++||.+.+.+
T Consensus 140 ~gie~~~vd~----~~----~~~~~~~i------~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~-~vvVDnTf~~p 204 (409)
T KOG0053|consen 140 FGGEGDFVDV----DD----LKKILKAI------KENTKAVFLESPSNPLLKVPDIEKLARLAHKYGF-LVVVDNTFGSP 204 (409)
T ss_pred hCceeeeech----hh----HHHHHHhh------ccCceEEEEECCCCCccccccHHHHHHHHhhCCC-EEEEeCCcCcc
Confidence 9999998842 22 68888888 5789999999999999999999999999999999 89999987766
Q ss_pred CccccccccCccEEEEcCcccCcCCCC--cEEEEEe
Q 012991 234 SIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCR 267 (452)
Q Consensus 234 ~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~ 267 (452)
.-.+.-.+|+|+++.|.+||++|-.- .|.++.+
T Consensus 205 -~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n 239 (409)
T KOG0053|consen 205 -YNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLN 239 (409)
T ss_pred -cccChhhcCCCEEEEeeeeeecCCcceeeeEEecC
Confidence 33455566899999999998655322 4677776
No 298
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.80 E-value=3.2e-16 Score=156.14 Aligned_cols=340 Identities=13% Similarity=0.140 Sum_probs=204.6
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCC-C-CcEEEe-cChhHHHHHHHHHhhcccc
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADD-V-GEISLV-DNATTAAAIVLQQIGRGFT 123 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~-~-~~i~~t-~g~t~a~~~~~~~l~~~~~ 123 (452)
..|..++.+.+++.+.+.... .... .....+...++.+++++.+..+. . +.++|+ +|||+|++.++. ++|.+
T Consensus 52 ~lGh~~p~v~~ai~~ql~~~~-~~~~--~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~Alk-lAr~~- 126 (425)
T PRK09264 52 NYGHNNPVLKQALIDYLQRDG-ITHG--LDMHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALK-LARKV- 126 (425)
T ss_pred cCCCCCHHHHHHHHHHHHhcc-cccc--cccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHH-HHHHh-
Confidence 356778889999998876421 1111 11123445667777777653221 1 256674 899999999998 44544
Q ss_pred cCCCCCCCEEEEeCCcchhHHHHHHHHHH----h--cC---cEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEE
Q 012991 124 EGRFHRNDTVLMLHCAFQAVKKSIQAYVT----R--AG---GSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLA 194 (452)
Q Consensus 124 ~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~----~--~g---~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv 194 (452)
..+.+|+....+|++.......+.. + .+ ..+..++.+.....+...++.+++.+++.....+++.+|
T Consensus 127 ----tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aav 202 (425)
T PRK09264 127 ----TGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAV 202 (425)
T ss_pred ----cCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEE
Confidence 3456889888888886543322111 0 01 123344321100001123677888886432212468899
Q ss_pred EEeccCCCCcccc----cHHHHHHHHHHcCCCEEEEecccc-cCCc----cccccccCccEEEEcCcccCcC-CCCcEEE
Q 012991 195 IIDHITSMPCVVI----PVRKLVKICRDEGVDQVFVDAAHA-MGSI----KIDVKEIGADFYVSNLHKWFFC-PPSVAFL 264 (452)
Q Consensus 195 ~~~~~~n~tG~~~----~l~~i~~l~~~~~~~~~ivD~a~~-~g~~----~~~~~~~~~d~~~~s~~K~l~g-~~G~G~l 264 (452)
+++......|.+. .+++|.++|++||+ ++|+|++++ +|-. ..+.....+|++++| |.+.+ +..+|++
T Consensus 203 i~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~-llI~DEV~tG~GrtG~~~~~~~~~v~PDi~t~~--K~l~~~G~pigav 279 (425)
T PRK09264 203 IVETVQGEGGINVASAEWLQRLAKLCRKHDI-LLIVDDIQAGCGRTGTFFSFERAGITPDIVTLS--KSISGYGLPMALV 279 (425)
T ss_pred EEecccCCCCCcCCCHHHHHHHHHHHHHcCc-EEEEechhhCCccccHHHHHhhcCCCCCEEEec--cccCCCccceEEE
Confidence 9999988888765 38899999999999 899999986 3211 123233468987775 97543 3336888
Q ss_pred EEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHH-HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcC
Q 012991 265 YCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAV-TFVSRFEGGIDGIMQRNHEQALKMARMLANAWG 343 (452)
Q Consensus 265 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al-~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~ 343 (452)
++++++ .. + .+.. . ..++.++ ..+..+..+++ +.+. .+.+.++++++.+++.+.|.++..
T Consensus 280 ~~~~~i-~~-~-~~~~---~------~~T~~gn--p~~~aaa~a~l~~~~~-----~~~l~~~~~~~g~~l~~~l~~l~~ 340 (425)
T PRK09264 280 LIKPEL-DV-W-KPGE---H------NGTFRGN--NLAFVTATAALEEYWS-----DDAFEKEVKAKGELVRERLEEIAA 340 (425)
T ss_pred EEchhh-hc-c-CCCc---c------CCCCCCC--HHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 888775 33 2 1110 0 0111122 22223333444 2322 245778888888888888876521
Q ss_pred -CC-cCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEeccc
Q 012991 344 -TS-LGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQ 421 (452)
Q Consensus 344 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~ 421 (452)
.. +.......+.++++.++ +......+...+.++ ||.+.... .....||++++
T Consensus 341 ~~~~~~~~vrg~Gl~~~i~l~------~~~~~~~l~~~~~~~-Gv~~~~~~------------------~~~~~lr~~p~ 395 (425)
T PRK09264 341 KYPGLGAEVRGRGMMQGIDFG------DGELAGKIAAEAFEN-GLIIETSG------------------PEDEVVKLLPP 395 (425)
T ss_pred hCCCceecceecccEEEEEec------ChHHHHHHHHHHHHC-CCEEeccC------------------CCCCEEEEeCC
Confidence 22 11222233667777775 233456788888765 99985321 12368999999
Q ss_pred ccCCHHHHHHHHHHHHHHHhc
Q 012991 422 VYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 422 ~~~t~~di~~l~~~l~~~~~~ 442 (452)
..+|++||+.++++|++.++.
T Consensus 396 l~~t~~ei~~~~~~l~~~l~~ 416 (425)
T PRK09264 396 LTIDEEELEEGLDILEEAVAE 416 (425)
T ss_pred CCCCHHHHHHHHHHHHHHHHH
Confidence 889999999999999998864
No 299
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.80 E-value=1.7e-16 Score=158.48 Aligned_cols=344 Identities=14% Similarity=0.169 Sum_probs=210.7
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|...+.|.+++.+.+..... ... .....+...++.++|++.+.....+.++|++||++|++.++. ++|.+
T Consensus 55 ~lGH~~p~v~~Ai~~ql~~~~~-~~~--~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~Aik-lAr~~---- 126 (445)
T PRK08593 55 NVGHAPPRVVEAIKAQADKFIH-YTP--AYMYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIK-FARAY---- 126 (445)
T ss_pred cCCCCCHHHHHHHHHHHHhccC-ccc--cccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHH-HHHHh----
Confidence 3567778899999988765311 111 112245567788888888754212589999999999999998 44443
Q ss_pred CCCCCEEEEeCCcchhHHHHHHHHHHh-------cC---cEEEEEeCCCCC------C-ChH--HHHHHHHHHHhccccC
Q 012991 127 FHRNDTVLMLHCAFQAVKKSIQAYVTR-------AG---GSVVEVQLPFPL------A-SEE--EIINEFKKGIEKGKKD 187 (452)
Q Consensus 127 ~~~g~~Vl~~~~~~~s~~~~~~~~a~~-------~g---~~v~~~~~~~~~------~-~~~--~~~~~l~~~i~~~~~~ 187 (452)
..+.+|+..+..|++.......+... .+ ..+..++.+... . .+. ..++.+++.+++.. .
T Consensus 127 -tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 204 (445)
T PRK08593 127 -TGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYL-P 204 (445)
T ss_pred -hCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhc-C
Confidence 33567888888888765433221110 00 113334322110 0 011 11456666554210 1
Q ss_pred CCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEeccc-ccCCccc----cccccCccEEEEcCcccCcCC
Q 012991 188 GKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAH-AMGSIKI----DVKEIGADFYVSNLHKWFFCP 258 (452)
Q Consensus 188 ~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~-~~g~~~~----~~~~~~~d~~~~s~~K~l~g~ 258 (452)
.+++++|+++......|.+.| +++|.++|++||+ ++|+|+++ ++|.... +.....+|++++ +|.+.++
T Consensus 205 ~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~-llI~DEv~tg~GrtG~~~a~~~~gv~pDi~t~--gK~l~~G 281 (445)
T PRK08593 205 ADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGI-LFAVDDIQQGLGRTGKWSSISHFNITPDLMSF--GKSLAGG 281 (445)
T ss_pred CCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCC-EEEEechhhCCCcCchHHHHHhcCCCCCEeee--cccccCC
Confidence 357899999999998898876 8899999999999 89999997 4443221 222335787765 4887654
Q ss_pred CCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHH
Q 012991 259 PSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARML 338 (452)
Q Consensus 259 ~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L 338 (452)
..+|++++++++.+. +.... ..++...+.....+..++++.+.+ +.+.++.+++.+++.+.|
T Consensus 282 ~p~gav~~~~~i~~~-~~~~~------------~~~T~~~~pl~~aaa~a~l~~l~~-----~~l~~~~~~~g~~l~~~L 343 (445)
T PRK08593 282 MPMSAIVGRKEIMES-LEAPA------------HLFTTGANPVSCAAALATIDMIED-----ESLLQRSAEKGEYARKRF 343 (445)
T ss_pred cccEEEEEcHHHHhh-hccCC------------CCCCCCCCHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHH
Confidence 447888898888765 21110 000112222333444455566553 356778888889999988
Q ss_pred HHHc-CCCcCCCcccccceEEEEcCCc--cccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccce
Q 012991 339 ANAW-GTSLGSPPEICAAMVMVGLPSR--LRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGY 415 (452)
Q Consensus 339 ~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (452)
.++. ...++......+.++.+.+... ....+......+...+.+ .||.+... ..+.
T Consensus 344 ~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~-~Gv~~~~~--------------------~~~~ 402 (445)
T PRK08593 344 DQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFE-HGVVIIAV--------------------AGNV 402 (445)
T ss_pred HHHHhcCCcEEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHH-CCeEEecc--------------------CCCE
Confidence 8752 1233222223344555544210 011112234568888866 49988421 1368
Q ss_pred EEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 416 ARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 416 iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
+|++++..+|++||+.+++++.+.++.
T Consensus 403 lr~~p~l~~t~~~id~~~~~l~~~l~~ 429 (445)
T PRK08593 403 LRFQPPLVITYEQLDTALNTIEQAFTA 429 (445)
T ss_pred EEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998864
No 300
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.80 E-value=1.3e-16 Score=161.01 Aligned_cols=356 Identities=12% Similarity=0.106 Sum_probs=211.6
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccC
Q 012991 46 GSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEG 125 (452)
Q Consensus 46 ~~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~ 125 (452)
...|...+.+.+++.+.+..... .+.. .....+...++.++|.+++...+.+.++|+++|++|+..++... |.|...
T Consensus 101 ~~lGh~hp~v~~Av~~ql~~~~~-~~~~-~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlA-r~~~~~ 177 (504)
T PLN02760 101 TALGGSEPRLVAAATEQLNKLPF-YHSF-WNRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLV-WYYNNA 177 (504)
T ss_pred cccCCCCHHHHHHHHHHHhhccc-eecc-cccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHH-HHHHHh
Confidence 45667778899999998875321 1111 01224556778888888764322468999999999999999854 443211
Q ss_pred CCCC-CCEEEEeCCcchhHHHHHHHHHH------hcCc---EEEEEeCCC------CCCChH---HH-HHHHHHHHhccc
Q 012991 126 RFHR-NDTVLMLHCAFQAVKKSIQAYVT------RAGG---SVVEVQLPF------PLASEE---EI-INEFKKGIEKGK 185 (452)
Q Consensus 126 ~~~~-g~~Vl~~~~~~~s~~~~~~~~a~------~~g~---~v~~~~~~~------~~~~~~---~~-~~~l~~~i~~~~ 185 (452)
.-.+ ..+|+..+..|++.......+.. ..+. .+..++.+. +..... .. .+++++.+.+.
T Consensus 178 ~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~- 256 (504)
T PLN02760 178 LGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKE- 256 (504)
T ss_pred cCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhc-
Confidence 1112 36788888777775332211110 0010 022222110 101111 11 46677777421
Q ss_pred cCCCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEeccc-ccCCccc----cccccCccEEEEcCcccCc
Q 012991 186 KDGKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAH-AMGSIKI----DVKEIGADFYVSNLHKWFF 256 (452)
Q Consensus 186 ~~~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~-~~g~~~~----~~~~~~~d~~~~s~~K~l~ 256 (452)
..+++++|+++......|.+.| +++|.++|++||+ ++|+|+++ ++|-... +.....+|+++++ |.+.
T Consensus 257 -~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~-lLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlg--K~lg 332 (504)
T PLN02760 257 -GPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDI-LFIADEVICAFGRLGTMFGCDKYNIKPDLVSLA--KALS 332 (504)
T ss_pred -CCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCC-EEEecchhhCCcccchhhHHHhcCCCCcEEEec--cccc
Confidence 1356899999999888899988 9999999999999 89999998 5654321 2223358987776 9886
Q ss_pred CCC-CcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 012991 257 CPP-SVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMA 335 (452)
Q Consensus 257 g~~-G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~ 335 (452)
|+. .+|.+++++++.+. + .+.. . .........++.+ +..+..+..++++.+.+ +.+.++++++.++|+
T Consensus 333 gG~~PigAv~~~~~i~d~-~-~~~~-~-~~~~~~h~~T~~g--nPl~~Aaala~Le~i~~-----~~l~~~~~~~g~~l~ 401 (504)
T PLN02760 333 SAYMPIGAVLVSPEISDV-I-HSQS-N-KLGSFAHGFTYSG--HPVSCAVALEALKIYKE-----RNIPEHVNKIAPRFQ 401 (504)
T ss_pred CCccccceEeecHHHHhh-h-hccc-c-cccCcccCCCCCC--CHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHH
Confidence 642 36778888887764 2 1100 0 0000001111222 22233333445555543 356888899999999
Q ss_pred HHHHHHcCCCcCCCcccccceEEEEcCCccccCCh-----hhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCC
Q 012991 336 RMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGE-----DDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDG 410 (452)
Q Consensus 336 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~ 410 (452)
+.|.++....++......+.++.+.+.+.....+. .-...+.+.+.+ .||.+..
T Consensus 402 ~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~-~Gvl~~~-------------------- 460 (504)
T PLN02760 402 DGIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKK-RGMLVRV-------------------- 460 (504)
T ss_pred HHHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHh-CCcEEEe--------------------
Confidence 99987633333333333456666655321010000 014557777766 4999842
Q ss_pred CccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 411 IITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 411 ~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
.+..+|+++....|++||+++++++.+++..
T Consensus 461 -~g~~lrl~Ppl~it~eeid~~~~~l~~al~~ 491 (504)
T PLN02760 461 -AGDNIMMSPPLIITPEEVDELISIYGKALKA 491 (504)
T ss_pred -cCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 1247999999888999999999999998864
No 301
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.80 E-value=8.4e-17 Score=160.58 Aligned_cols=352 Identities=11% Similarity=0.121 Sum_probs=210.2
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|..++.+.+++.+.+..... .... ....+...++.++|++++..+ .+.+.|++||++|++.++. ++|.++...
T Consensus 62 ~lGh~~p~v~~ai~~ql~~l~~-~~~~--~~~~~~~~~la~~L~~~~p~~-~~~v~f~~sGseAve~Alk-lAr~~~~~~ 136 (445)
T PRK09221 62 NAGHGRPEIVEAVARQAATLDY-APAF--QMGHPLAFELAERLAELAPGG-LDHVFFTNSGSESVDTALK-IALAYHRAR 136 (445)
T ss_pred cCCCCCHHHHHHHHHHHHhccC-cccc--ccCCHHHHHHHHHHHHhCCCC-CCEEEEeCCcHHHHHHHHH-HHHHHHHhc
Confidence 3567888899999988765311 1111 112344567888888887542 4689999999999999998 445443111
Q ss_pred CC-CCCEEEEeCCcchhHHHHHHHHHH----h--cC---cEEEEEeCCC--C---CC----ChH-HHHHHHHHHHhcccc
Q 012991 127 FH-RNDTVLMLHCAFQAVKKSIQAYVT----R--AG---GSVVEVQLPF--P---LA----SEE-EIINEFKKGIEKGKK 186 (452)
Q Consensus 127 ~~-~g~~Vl~~~~~~~s~~~~~~~~a~----~--~g---~~v~~~~~~~--~---~~----~~~-~~~~~l~~~i~~~~~ 186 (452)
-+ ...+|+....+|++.......+.. + .+ ..+..++.+. + .. ... ...+++++.+++..
T Consensus 137 g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~- 215 (445)
T PRK09221 137 GQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHD- 215 (445)
T ss_pred CCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcC-
Confidence 11 245888888888875433211100 0 00 1122332210 0 00 001 11567777775421
Q ss_pred CCCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCc--c--ccccccCccEEEEcCcccCcC
Q 012991 187 DGKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSI--K--IDVKEIGADFYVSNLHKWFFC 257 (452)
Q Consensus 187 ~~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~--~--~~~~~~~~d~~~~s~~K~l~g 257 (452)
.+++.+|+++......|.+.| +++|.++|++||+ ++|+|++++ +|-. . .+.....+|+++++ |.+.|
T Consensus 216 -~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~-llI~DEV~tG~GRtG~~~~~~~~gv~PDi~~~g--K~l~g 291 (445)
T PRK09221 216 -ASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGI-LLIFDEVITGFGRLGAAFAAERFGVTPDIITFA--KGLTN 291 (445)
T ss_pred -CCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCC-EEEEeehhhCCCcCchhhHHHhcCCCCCEEEec--ccccc
Confidence 257899999999999999988 9999999999999 899999984 5432 1 22223357988776 87654
Q ss_pred C-CCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 012991 258 P-PSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMAR 336 (452)
Q Consensus 258 ~-~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~ 336 (452)
+ ..+|.+++++++.+. +.... ..........++.+ +.....+..++++.+.+ +.+.++.+++.+++++
T Consensus 292 G~~Pi~av~~~~~i~~~-~~~~~---~~~~~~~~~~T~~~--~pl~~aaa~a~L~~i~~-----~~l~~~~~~~g~~l~~ 360 (445)
T PRK09221 292 GAIPMGAVIASDEIYDA-FMQGP---EYAIEFFHGYTYSA--HPVACAAGLATLDIYRE-----EDLFERAAELAPYFED 360 (445)
T ss_pred CcccceeeEEcHHHHHh-hccCc---ccccccccccCCCc--CHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHH
Confidence 3 236778888877664 21100 00000000111112 22223333345555553 2467889999999999
Q ss_pred HHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceE
Q 012991 337 MLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYA 416 (452)
Q Consensus 337 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i 416 (452)
.|.++.....+.+....+.+..+.+.... ........++.+.|.++ ||.+.. .++.+
T Consensus 361 ~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~-~~~~~~~~~~~~~~~~~-Gv~~~~---------------------~~~~l 417 (445)
T PRK09221 361 AVHSLKGLPHVIDIRNIGLVAGIELAPRP-GAPGARGYEAFMKCFEK-GLLVRY---------------------TGDTI 417 (445)
T ss_pred HHHhhccCCCEEEEecCceEEEEEEeccc-ccccchHHHHHHHHHHC-CeEEee---------------------cCCEE
Confidence 99876433322222223444444442100 00112345788888765 999852 12589
Q ss_pred EecccccCCHHHHHHHHHHHHHHHhc
Q 012991 417 RISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 417 Ris~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
|++++...|++||++++++|++.+.+
T Consensus 418 r~~Ppl~~t~~eid~~~~~l~~~l~~ 443 (445)
T PRK09221 418 ALSPPLIIEKAQIDELVDALGDALRA 443 (445)
T ss_pred EEECCccCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998854
No 302
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.79 E-value=1e-16 Score=159.83 Aligned_cols=352 Identities=12% Similarity=0.144 Sum_probs=210.9
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|...+.+.+++.+.+....... .. ....+...++.+++++++... .+.+.|+++||+|++.++. ++|.|....
T Consensus 59 ~lGh~~p~v~~ai~~ql~~l~~~~-~~--~~~~~~~~~la~~l~~~~p~~-~~~v~f~~sGseA~e~Alk-lAr~~~~~~ 133 (442)
T PRK13360 59 NAGHGRPEIVEAVRAQAGELDYAP-AF--QMGHPKAFELANRIAEIAPGG-LNHVFFTNSGSESVDTALK-IALAYHRAR 133 (442)
T ss_pred ccCCCCHHHHHHHHHHHHhCCCcc-cC--CcCCHHHHHHHHHHHHhCCCC-CCEEEEeCCcHHHHHHHHH-HHHHHHHhc
Confidence 347788889999998886532111 11 112344567888888887532 4689999999999999988 445442111
Q ss_pred CC-CCCEEEEeCCcchhHHHHHHHHH----Hhc--C---cEEEEEeCCCC-----CC----ChHH-HHHHHHHHHhcccc
Q 012991 127 FH-RNDTVLMLHCAFQAVKKSIQAYV----TRA--G---GSVVEVQLPFP-----LA----SEEE-IINEFKKGIEKGKK 186 (452)
Q Consensus 127 ~~-~g~~Vl~~~~~~~s~~~~~~~~a----~~~--g---~~v~~~~~~~~-----~~----~~~~-~~~~l~~~i~~~~~ 186 (452)
-. .+.+|+....+|++.......+. .+. + ..+..++.+.. .. .... ..+.+++.++..
T Consensus 134 g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~-- 211 (442)
T PRK13360 134 GEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLH-- 211 (442)
T ss_pred CCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhc--
Confidence 11 24589998888888543221110 000 1 11223332100 00 0111 256788888532
Q ss_pred CCCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEeccc-ccCCcc----ccccccCccEEEEcCcccCcC
Q 012991 187 DGKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAH-AMGSIK----IDVKEIGADFYVSNLHKWFFC 257 (452)
Q Consensus 187 ~~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~-~~g~~~----~~~~~~~~d~~~~s~~K~l~g 257 (452)
...++.+|+++......|.+.| +++|.++|++||+ ++|+|+++ ++|-.. .+.....+|+++++ |.+.|
T Consensus 212 ~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~-llI~DEv~tG~GrtG~~~a~~~~gv~PDivt~g--K~l~g 288 (442)
T PRK13360 212 DASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGI-LLIFDEVITGFGRLGAPFAAQYFGVTPDLLTCA--KGLTN 288 (442)
T ss_pred CCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCC-EEEEechhhCCCCCccchhhhhcCCCCceeeee--ecccc
Confidence 1357899999999999999988 9999999999999 89999998 555432 12223457888664 98765
Q ss_pred C-CCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 012991 258 P-PSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMAR 336 (452)
Q Consensus 258 ~-~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~ 336 (452)
+ ..+|.+++++++.+. +..... .+.......++ +.+.....+..++++.+.+ +.+.++.+++.+++.+
T Consensus 289 G~~P~gav~~~~~i~~~-~~~~~~---~~~~~~~~~T~--~g~pl~~aaa~a~L~~l~~-----~~l~~~~~~~g~~l~~ 357 (442)
T PRK13360 289 GAIPMGAVFVSSEIHDA-FMQGPE---AGIEFFHGYTY--SGHPLACAAALATLDLYER-----EGLLTRAARLAPYWED 357 (442)
T ss_pred CccceEEEEEcHHHHHH-hhcCCc---cccccccCCCC--CCCHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHH
Confidence 3 236777888877654 211000 00000001111 1233334445556666654 2467788889999999
Q ss_pred HHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceE
Q 012991 337 MLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYA 416 (452)
Q Consensus 337 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i 416 (452)
.|.++.......+....+.+..+.+..... .....+.++...|.++ ||.+.. .++.+
T Consensus 358 ~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~-~~~~~~~~~~~~l~~~-Gvl~~~---------------------~~~~l 414 (442)
T PRK13360 358 ALHSLRDAPHVIDIRNLGLVGAVELAPRDG-KPGKRAYEVFLKCFEK-GLMIRY---------------------TGDIL 414 (442)
T ss_pred HHHHhhcCCCeeeeeccceEEEEEEecCCC-CcchhHHHHHHHHHHC-CcEEEe---------------------cCCEE
Confidence 988763332222222223333333321000 0112345677777664 999842 12579
Q ss_pred EecccccCCHHHHHHHHHHHHHHHhc
Q 012991 417 RISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 417 Ris~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
|++++...|++||++++++|.+.+++
T Consensus 415 r~~Ppl~~t~~eid~~~~~l~~~l~~ 440 (442)
T PRK13360 415 ALSPPLIIEEAQIDELFDILAQALKE 440 (442)
T ss_pred EEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998853
No 303
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.79 E-value=1.2e-16 Score=160.00 Aligned_cols=345 Identities=12% Similarity=0.117 Sum_probs=208.9
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|..++.|.+++.+.+......+... ...+...++.++|+++++.. .+.++|++||++|+..++. ++|.+
T Consensus 56 ~lGh~~p~v~~a~~~q~~~~~~~~~~~---~~~~~~~~la~~L~~~~~~~-~~~v~f~~SGseA~e~Alk-lAr~~---- 126 (433)
T PRK08117 56 NVGHRHPKVVQAIKEQADKLMHGPSGV---IYYESILKLAEELAEITPGG-LDCFFFSNSGAEAIEGALK-LAKHV---- 126 (433)
T ss_pred cCCCCCHHHHHHHHHHHHhccCccccc---cCCHHHHHHHHHHHHhCCCC-CCEEEEeCcHHHHHHHHHH-HHHHh----
Confidence 345677889999999886542111111 12455688889999988432 4689999999999999998 55544
Q ss_pred CCCCCEEEEeCCcchhHHHHHHHHHH----h-cC-----cEEEEEeCCCCC------C-ChH--HHHHHHHHHHhccccC
Q 012991 127 FHRNDTVLMLHCAFQAVKKSIQAYVT----R-AG-----GSVVEVQLPFPL------A-SEE--EIINEFKKGIEKGKKD 187 (452)
Q Consensus 127 ~~~g~~Vl~~~~~~~s~~~~~~~~a~----~-~g-----~~v~~~~~~~~~------~-~~~--~~~~~l~~~i~~~~~~ 187 (452)
....+|+..+..||+.......+.. . .+ ..+..++.+... . ... ...+.+++.+++.. .
T Consensus 127 -tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~ 204 (433)
T PRK08117 127 -TKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQV-T 204 (433)
T ss_pred -cCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhcc-C
Confidence 3356788888777774433211100 0 00 112233321100 0 011 12566777765311 1
Q ss_pred CCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEeccccc-CCcc--c--cccccCccEEEEcCcccCcCC
Q 012991 188 GKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHAM-GSIK--I--DVKEIGADFYVSNLHKWFFCP 258 (452)
Q Consensus 188 ~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~~-g~~~--~--~~~~~~~d~~~~s~~K~l~g~ 258 (452)
.+++++|+++......|.+.| +++|.++|++||+ ++|+|++|+. |-.. + ......+|++ +++|.+.++
T Consensus 205 ~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~-llI~DEv~tG~gr~G~~~~~~~~gv~pDi~--t~sK~lg~G 281 (433)
T PRK08117 205 PEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGI-LLIFDEVQTGFGRTGEWFAAQTFGVVPDIM--TIAKGIASG 281 (433)
T ss_pred CCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCC-EEEEecchhccCccccchhHhhcCCCCCEe--ehhhhccCC
Confidence 357899999999999999988 9999999999999 8999999872 1111 1 1112346764 566987654
Q ss_pred CCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHH
Q 012991 259 PSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARML 338 (452)
Q Consensus 259 ~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L 338 (452)
.-+|+++.++++.+. + ... . .+ . +...+.....+..++++.+.+ +.+.++++++.+++.+.|
T Consensus 282 ~pigav~~~~~i~~~-~-~~~-~--~~------~--T~~~np~~~aaa~a~L~~l~~-----~~l~~~~~~~g~~l~~~L 343 (433)
T PRK08117 282 LPLSAVVASKELMEQ-W-PLG-S--HG------T--TFGGNPVACAAALATLEVIKE-----EKLLDNANEMGAYALERL 343 (433)
T ss_pred CcceeEEEcHHHHhh-c-cCC-C--CC------C--CCCcCHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHH
Confidence 447888888887765 2 111 0 00 0 012233334444455555542 346777888888888888
Q ss_pred HHHcC-CCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEE
Q 012991 339 ANAWG-TSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYAR 417 (452)
Q Consensus 339 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iR 417 (452)
.++.. ..+.......+.++.+.+.+.....+......+.+.+.+ .||.+.... ...+.+|
T Consensus 344 ~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~g------------------~~~~~lR 404 (433)
T PRK08117 344 EVLKEKHPVIGDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLE-KGLLFYLCG------------------NAGNVLR 404 (433)
T ss_pred HHHHhcCCceeeeecCCcEEEEEEecCCCCcchHHHHHHHHHHHH-CCCEEeecC------------------CCCCEEE
Confidence 77521 222222222344555555211110112234567777766 499874211 1246899
Q ss_pred ecccccCCHHHHHHHHHHHHHHHhc
Q 012991 418 ISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 418 is~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
++++..+|++||++++++|.+++++
T Consensus 405 l~p~~~~t~~~i~~~~~~l~~~l~~ 429 (433)
T PRK08117 405 MIPPLTVTKEEIDEGLDILDEALTE 429 (433)
T ss_pred EeCCccCCHHHHHHHHHHHHHHHHH
Confidence 9998889999999999999998864
No 304
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.79 E-value=1.9e-16 Score=158.36 Aligned_cols=345 Identities=11% Similarity=0.075 Sum_probs=212.7
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|...+.+.+++.+.+.... .... .....+...++.+++++.++.. .+.+.|++|||+|++.++.. +|.+
T Consensus 66 ~lGh~~p~i~~Ai~~ql~~~~-~~~~--~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~SGsEA~e~Alkl-Ar~~---- 136 (457)
T PRK05639 66 STGYSHPKLVKAVQEQVALIQ-HSMI--GYTHSERAIRVAEKLAEISPIE-NPKVLFGLSGSDAVDMAIKV-SKFS---- 136 (457)
T ss_pred ccCCCCHHHHHHHHHHHHhcc-cccc--CccCCHHHHHHHHHHHhhCCCC-cCEEEEeCchHHHHHHHHHH-HHHh----
Confidence 356777889999998876531 1111 1112345567888888887643 36899999999999999984 4443
Q ss_pred CCCCCEEEEeCCcchhHHHHHHHHHHh-----cC-----cEEEEEeCCCCC----------CChH--H-HHHHHHHHHhc
Q 012991 127 FHRNDTVLMLHCAFQAVKKSIQAYVTR-----AG-----GSVVEVQLPFPL----------ASEE--E-IINEFKKGIEK 183 (452)
Q Consensus 127 ~~~g~~Vl~~~~~~~s~~~~~~~~a~~-----~g-----~~v~~~~~~~~~----------~~~~--~-~~~~l~~~i~~ 183 (452)
..+.+|+....+|++.......+... .+ ..+..++.+.+. +.+. . ..+.+++.+..
T Consensus 137 -tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~ 215 (457)
T PRK05639 137 -TRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFS 215 (457)
T ss_pred -cCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 34568888888888865443322110 11 123344332110 0001 1 13456665532
Q ss_pred cccCCCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEEEEcCccc
Q 012991 184 GKKDGKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLHKW 254 (452)
Q Consensus 184 ~~~~~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~ 254 (452)
.....+++++|+++......|.+.| +++|.++|++||+ ++|+|++++ +|-.. .+.....+|++++ .|.
T Consensus 216 ~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~-llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~--gK~ 292 (457)
T PRK05639 216 HVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGI-LLVMDEVQTGIGRTGKWFASEWFEVKPDLIIF--GKG 292 (457)
T ss_pred hhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCC-EEEEechhhccCcCchHHHHHhcCCCCCEEEe--chh
Confidence 1111467999999998888888765 7789999999999 899999986 32221 1222346899985 599
Q ss_pred CcCCCCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 012991 255 FFCPPSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKM 334 (452)
Q Consensus 255 l~g~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l 334 (452)
+.|+.++|++++++++.+. ..... + .++.+ +.....+..++++.+.+ +.+.++.+++.++|
T Consensus 293 l~gG~pi~av~~~~~i~~~-~~~~~-----~------~T~~g--~p~~~aaa~a~l~~l~~-----~~l~~~~~~~g~~l 353 (457)
T PRK05639 293 VASGMGLSGVIGRKELMDL-TSGSA-----L------LTPAA--NPVISAAAEATLEIIEE-----ENLLKNALKVGEFI 353 (457)
T ss_pred hcCCCcceeEEehHHHHhh-cCCCc-----c------cCCCc--CHHHHHHHHHHHHHHHH-----ccHHHHHHHHHHHH
Confidence 8876778999998887763 11011 0 11112 22223334445555553 34567778888999
Q ss_pred HHHHHHHc-CCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCcc
Q 012991 335 ARMLANAW-GTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIIT 413 (452)
Q Consensus 335 ~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (452)
.+.|.++. ...++......+.++.+.+-......+......+.+.+.++ |+.+.... ..+
T Consensus 354 ~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~-Gv~~~~~g------------------~~~ 414 (457)
T PRK05639 354 KKRLLEMKESFEVIGDVRGKGLMIGVEIVKENGKPDPELTGKICWRAFEL-GLILPSYG------------------MFG 414 (457)
T ss_pred HHHHHHHHHhCCCEEeeccceeEEEEEEecCCCCCCHHHHHHHHHHHHhC-CeEEeecC------------------CCC
Confidence 98888752 23333333334556665542100011112245677777764 99985321 124
Q ss_pred ceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 414 GYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 414 ~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
+.+|+.+....|++|++.++++|++.++.
T Consensus 415 ~~lr~~Ppl~it~~~id~~~~~l~~~l~~ 443 (457)
T PRK05639 415 NVIRITPPLVITKEIAEKGLEIMERAIKD 443 (457)
T ss_pred CEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999864
No 305
>PLN00144 acetylornithine transaminase
Probab=99.79 E-value=1.6e-16 Score=156.01 Aligned_cols=326 Identities=11% Similarity=0.086 Sum_probs=204.2
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|...+.+.+++.+.+.... ..... ...+...++.+.+++..+. +.++|+++||+|++.++. ++|.+....
T Consensus 28 ~lGh~~p~v~~ai~~q~~~~~-~~~~~---~~~~~~~~la~~l~~~~~~---~~v~f~~sGseA~e~Alk-lAr~~~~~~ 99 (382)
T PLN00144 28 ALGHGDPDWVKAVAEQAGTLA-HVSNV---YHTIPQVELAKRLVASSFA---DRVFFCNSGTEANEAAIK-FARKYQRVR 99 (382)
T ss_pred cCCCCCHHHHHHHHHHHHhcC-Ccccc---ccCHHHHHHHHHHHhcCCC---CeEEEeCCcHHHHHHHHH-HHHHHHhcc
Confidence 456778889999999887532 11111 1134456677777776543 599999999999999998 445543211
Q ss_pred CC--C------CCEEEEeCCcchhHHHHHHHHHHhcCc---------EEEEEeCCCCCCChHHHHHHHHHHHhccccCCC
Q 012991 127 FH--R------NDTVLMLHCAFQAVKKSIQAYVTRAGG---------SVVEVQLPFPLASEEEIINEFKKGIEKGKKDGK 189 (452)
Q Consensus 127 ~~--~------g~~Vl~~~~~~~s~~~~~~~~a~~~g~---------~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~ 189 (452)
.. + +.+|+....+|++.......+...... .+..+ +..+ ++.+++.++ ..
T Consensus 100 ~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~----~~~d----~~~l~~~~~-----~~ 166 (382)
T PLN00144 100 APDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFV----EYGN----LEAARKLIQ-----KG 166 (382)
T ss_pred CCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEe----CCCC----HHHHHHhcC-----CC
Confidence 11 1 357999888888865443221110000 11222 1111 577887774 35
Q ss_pred ceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCc----cccccccCccEEEEcCcccCcCCCC
Q 012991 190 MIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSI----KIDVKEIGADFYVSNLHKWFFCPPS 260 (452)
Q Consensus 190 ~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~----~~~~~~~~~d~~~~s~~K~l~g~~G 260 (452)
++++|+++..+++.|...+ +++|.++|++||+ ++|+|++++ +|-. +.+.....+|++++ +|.+.+...
T Consensus 167 ~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~-llI~DEv~tg~gr~g~~~~~~~~~~~PDi~t~--sK~l~~G~p 243 (382)
T PLN00144 167 KTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGA-LLVFDEVQCGLGRTGYLWAHEAYGVEPDIMTL--AKPLAGGLP 243 (382)
T ss_pred CeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCC-EEEEechhhCCCccchHhhhhhcCCCCCEEEe--cccccCCcc
Confidence 7889999888888555432 7789999999999 899999976 3222 11244456885555 598876555
Q ss_pred cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHH
Q 012991 261 VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLAN 340 (452)
Q Consensus 261 ~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~ 340 (452)
+|++++++++.+. + .+.. ...+ ...+.....+..++++++.+ ..+.++++++.+++.+.|.+
T Consensus 244 ig~v~~~~~~~~~-~-~~~~---------~~~T--~~~~pl~~aaa~a~l~~i~~-----~~~~~~~~~~g~~l~~~l~~ 305 (382)
T PLN00144 244 IGAVLVTEKVASA-I-NPGD---------HGST--FAGGPLVCNAALAVLDKISK-----PGFLASVAKKGEYLRELLRR 305 (382)
T ss_pred eEEEEEcHHHHhc-c-CCCC---------CCCC--CCCCHHHHHHHHHHHHHHhh-----chHHHHHHHHHHHHHHHHHH
Confidence 8999998888765 2 1110 0111 12222233444455677663 33466677777777777665
Q ss_pred Hc-CCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEec
Q 012991 341 AW-GTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARIS 419 (452)
Q Consensus 341 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis 419 (452)
+. ...........+.++++.+. .+...+.+.+.++ ||.+... ...+.+|++
T Consensus 306 ~~~~~~~~~~vrg~G~~~~l~l~--------~~~~~~~~~~~~~-Gv~i~~~-------------------~~~~~lrl~ 357 (382)
T PLN00144 306 KLGGNPHVKEVRGVGLLVGIQLD--------VPAGPLVDACRDS-GLLVLTA-------------------GKGDVVRLV 357 (382)
T ss_pred HHhhCCCceeeecCceEEEEEec--------CccHHHHHHHHHC-CeEEeec-------------------CCCCEEEEe
Confidence 42 22122222224778888772 2345788888764 9998532 113689999
Q ss_pred ccccCCHHHHHHHHHHHHHHHhc
Q 012991 420 HQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 420 ~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
++...+++|++.+++.|.+++..
T Consensus 358 p~~~~~~~~i~~~~~~l~~~l~~ 380 (382)
T PLN00144 358 PPLVISEAELEQAVEILADCLPA 380 (382)
T ss_pred CCCccCHHHHHHHHHHHHHHHHh
Confidence 99877899999999999998864
No 306
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.79 E-value=1.9e-16 Score=158.44 Aligned_cols=342 Identities=15% Similarity=0.190 Sum_probs=208.2
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|...+.|.+++.+.+.... ... +.....+...++.+++++.++....+.++|+++|++|++.++. ++|.+
T Consensus 69 ~lGh~~p~v~~ai~~q~~~~~-~~~--~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~Alk-lAr~~---- 140 (443)
T PRK06058 69 SVGNSAPRVVEAVREQVARFT-HTC--FMVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVK-IARSY---- 140 (443)
T ss_pred ccCCCCHHHHHHHHHHHHhcc-Ccc--ccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHH-HHHHh----
Confidence 356778889999999886531 111 1112245566788888888753212589999999999999998 44444
Q ss_pred CCCCCEEEEeCCcchhHHHHHHHHHH-----hcC-----cEEEEEeCCCCCCCh--------H---HHHHHHHHHHhccc
Q 012991 127 FHRNDTVLMLHCAFQAVKKSIQAYVT-----RAG-----GSVVEVQLPFPLASE--------E---EIINEFKKGIEKGK 185 (452)
Q Consensus 127 ~~~g~~Vl~~~~~~~s~~~~~~~~a~-----~~g-----~~v~~~~~~~~~~~~--------~---~~~~~l~~~i~~~~ 185 (452)
..+++|+....+|++.......+.. +.+ ..+..++.+.+.++. . ...+.+++.+.
T Consensus 141 -tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--- 216 (443)
T PRK06058 141 -TGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVG--- 216 (443)
T ss_pred -hCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhC---
Confidence 3457899999999887544332211 001 112223221111110 0 01333444442
Q ss_pred cCCCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEEEEcCcccCc
Q 012991 186 KDGKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLHKWFF 256 (452)
Q Consensus 186 ~~~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~l~ 256 (452)
.+++++|+++......|.+.| +++|.++|++||+ ++|.|+++. +|-.. .+.....+|+++++ |.+.
T Consensus 217 --~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gi-llI~DEV~tGfgRtG~~fa~~~~gv~PDiv~~g--K~l~ 291 (443)
T PRK06058 217 --ADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGV-VFIADEVQTGFARTGAWFACEHEGIVPDLITTA--KGIA 291 (443)
T ss_pred --CCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCC-EEEEeccccCCCcChhhhHHHhcCCCCCEEEEc--cccc
Confidence 367899999888777787765 8899999999999 899999975 33221 12223458998886 9887
Q ss_pred CCCCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 012991 257 CPPSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMAR 336 (452)
Q Consensus 257 g~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~ 336 (452)
|+..+|++++++++.+. + .+.. ...+ ...+..+..+..++++.+.+ +.+.++.+++.+++.+
T Consensus 292 ~G~Pi~av~~~~~i~~~-~-~~~~---------~~~T--~~gnpl~~aaa~a~L~~~~~-----~~l~~~~~~~g~~l~~ 353 (443)
T PRK06058 292 GGLPLSAVTGRAEIMDA-P-HPGG---------LGGT--YGGNPVACAAALAAIETIEE-----DDLVARARQIEALMTD 353 (443)
T ss_pred CCCccEEEEEcHHHHhh-c-cCCC---------CCCC--CCCCHHHHHHHHHHHHHHHH-----cCHHHHHHHHHHHHHH
Confidence 65558999998887764 2 1110 0011 12222333444445555543 3567888888999999
Q ss_pred HHHHHcC-CCcCCCcccccceEEEEcCC-ccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccc
Q 012991 337 MLANAWG-TSLGSPPEICAAMVMVGLPS-RLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITG 414 (452)
Q Consensus 337 ~L~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (452)
.|.++.. ..++......+.++.+.+.. .....+..-...+.+.+.++ ||.+.... ..++
T Consensus 354 ~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~-Gv~~~~~~------------------~~~~ 414 (443)
T PRK06058 354 RLRALAAEDDRIGDVRGRGAMIAIELVKPGTTEPDAELTKALAAAAHAA-GVIVLTCG------------------TYGN 414 (443)
T ss_pred HHHHHHhhCCcEEeeeccceEEEEEEecCCCCCCcHHHHHHHHHHHHHC-CeEEeccC------------------CCCC
Confidence 9987632 23322222335565555521 00001111245677777664 99985321 1136
Q ss_pred eEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 415 YARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 415 ~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
++|+.++...|++||+.++++|++++++
T Consensus 415 ~lr~~Ppl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 415 VIRLLPPLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred EEEEECCCccCHHHHHHHHHHHHHHHHh
Confidence 8999998889999999999999998753
No 307
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.79 E-value=2.8e-16 Score=156.18 Aligned_cols=342 Identities=11% Similarity=0.142 Sum_probs=211.0
Q ss_pred CCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCC
Q 012991 48 FGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRF 127 (452)
Q Consensus 48 ~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~ 127 (452)
.|...+.+.+++.+.+.... .. .+.....+...++.+++++++...+.+.++|++|||+|++.++.. +|.+
T Consensus 54 lGh~~p~v~~ai~~ql~~~~-~~--~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~Alkl-Ar~~----- 124 (421)
T PRK09792 54 TGHRHPDLVAAVEQQLQQFT-HT--AYQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKI-ARAH----- 124 (421)
T ss_pred CCCCCHHHHHHHHHHHHhcc-Cc--ccCccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHH-HHHh-----
Confidence 46777889999999876531 11 111122344566777788876532236899999999999999984 4433
Q ss_pred CCCCEEEEeCCcchhHHHHHHHHHH-----hcC-----cEEEEEeCCCCCCCh----HHHHHHHHHHHhccccCCCceEE
Q 012991 128 HRNDTVLMLHCAFQAVKKSIQAYVT-----RAG-----GSVVEVQLPFPLASE----EEIINEFKKGIEKGKKDGKMIRL 193 (452)
Q Consensus 128 ~~g~~Vl~~~~~~~s~~~~~~~~a~-----~~g-----~~v~~~~~~~~~~~~----~~~~~~l~~~i~~~~~~~~~~~l 193 (452)
..+.+|+....+|++.......+.. +.+ ..+..++. |.+.. ....+.+++.+++.. ..+++++
T Consensus 125 tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~--p~~~~~~~~~~~~~~l~~~~~~~~-~~~~iaa 201 (421)
T PRK09792 125 TGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPY--PSDLHGISTQDSLDAIERLFKSDI-EAKQVAA 201 (421)
T ss_pred cCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCC--CcccccccHHHHHHHHHHHHHhcc-CCCceEE
Confidence 3446899888888886544332211 001 01233333 21111 112577787775310 1357899
Q ss_pred EEEeccCCCCcccc-c---HHHHHHHHHHcCCCEEEEecccc-cCCcc--cccc--ccCccEEEEcCcccCcCCCCcEEE
Q 012991 194 AIIDHITSMPCVVI-P---VRKLVKICRDEGVDQVFVDAAHA-MGSIK--IDVK--EIGADFYVSNLHKWFFCPPSVAFL 264 (452)
Q Consensus 194 v~~~~~~n~tG~~~-~---l~~i~~l~~~~~~~~~ivD~a~~-~g~~~--~~~~--~~~~d~~~~s~~K~l~g~~G~G~l 264 (452)
|+++..++++|... | +++|.++|++||+ ++|+|++++ +|-.. +... ...+|++++ +|.+.++..+|++
T Consensus 202 vi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~-llI~DEv~tg~gr~G~~~a~~~~~~~pDi~t~--gK~l~~G~pigav 278 (421)
T PRK09792 202 IIFEPVQGEGGFNVAPKELVAAIRRLCDEHGI-VMIADEVQSGFARTGKLFAMDHYADKPDLMTM--AKSLAGGMPLSGV 278 (421)
T ss_pred EEEccccCCCCCccCCHHHHHHHHHHHHHcCC-EEEEeccccCCCCCCchhHHHhcCCCCcEEEe--ehhhcCCCceEEE
Confidence 99999999999865 6 7899999999999 899999976 32221 1111 235786555 5988765558999
Q ss_pred EEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcC-
Q 012991 265 YCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWG- 343 (452)
Q Consensus 265 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~- 343 (452)
++++++.+. + .+.. ...+ ...+.....+..+.++++.+ +.+.++.+++.+++.+.|..+..
T Consensus 279 ~~~~~i~~~-~-~~~~---------~~~T--~~gnpl~~aaa~a~l~~l~~-----~~~~~~~~~~g~~l~~~l~~l~~~ 340 (421)
T PRK09792 279 VGNANIMDA-P-APGG---------LGGT--YAGNPLAVAAAHAVLNIIDK-----ESLCERANQLGQRLKNTLIDAKES 340 (421)
T ss_pred EEcHHHHhc-c-CCCC---------cCCC--CCCCHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHHHHHHHHHHh
Confidence 998887765 2 1110 0011 11222233344455666654 24566777888888887766521
Q ss_pred CCcCCCcccccceEEEEcCCccc-cCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccc
Q 012991 344 TSLGSPPEICAAMVMVGLPSRLR-VMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQV 422 (452)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 422 (452)
...+......+.++++.+++... ..+......+.+.+.++ ||.+.. . +..++.+|+.++.
T Consensus 341 ~p~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~-Gv~i~~---~---------------g~~~~~irl~P~l 401 (421)
T PRK09792 341 VPAIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQ-GLLLLT---C---------------GAYGNVIRFLYPL 401 (421)
T ss_pred CCCcceecccceEEEEEecCCccCCcchHHHHHHHHHHHHC-CcEEee---c---------------CCCCCEEEEeCCC
Confidence 22233333447788888753100 00112456788888764 999831 1 1224789999998
Q ss_pred cCCHHHHHHHHHHHHHHHh
Q 012991 423 YNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 423 ~~t~~di~~l~~~l~~~~~ 441 (452)
..+++||++++++|.+++.
T Consensus 402 ~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 402 TIPDAQFDAAMKILQDALS 420 (421)
T ss_pred cCCHHHHHHHHHHHHHHHh
Confidence 8899999999999998874
No 308
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.79 E-value=6.2e-17 Score=165.54 Aligned_cols=310 Identities=10% Similarity=0.028 Sum_probs=211.9
Q ss_pred hhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCc
Q 012991 77 SLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGG 156 (452)
Q Consensus 77 ~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~ 156 (452)
.......++++..|+.||++ ...++++|+|.++..++.++ +++||.|++++.+|.|++.++.. .|+
T Consensus 192 ~~~G~i~eAe~~aA~~fgAd--~tyfvvNGTS~~n~av~~a~--------~~~Gd~VLvdRN~HKSv~~aLil----sga 257 (713)
T PRK15399 192 DHTGPHLEAEEYIARTFGAE--QSYIVTNGTSTSNKIVGMYA--------APAGSTLLIDRNCHKSLAHLLMM----SDV 257 (713)
T ss_pred CCChHHHHHHHHHHHHhCCC--cEEEEeCChHHHHHHHHHHh--------cCCCCEEEeecccHHHHHHHHHH----cCC
Confidence 34556899999999999996 77888999999999999987 69999999999999999887655 599
Q ss_pred EEEEEeCCCCCCChH--------HH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEe
Q 012991 157 SVVEVQLPFPLASEE--------EI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVD 227 (452)
Q Consensus 157 ~v~~~~~~~~~~~~~--------~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD 227 (452)
.++++.+.. +..+ .+ .+.+++.|++.++ ..+|+.++++++++ .|.++++++|+++| |++++++|
T Consensus 258 ~PVYl~P~~--n~~Gi~g~I~~~~~~~e~I~~~i~~~p~-~~~p~~vvit~pTY-dGi~yd~~~I~~~~---g~~~ilvD 330 (713)
T PRK15399 258 VPIWLKPTR--NALGILGGIPRREFTRDSIEEKVAATTQ-AQWPVHAVITNSTY-DGLLYNTDWIKQTL---DVPSIHFD 330 (713)
T ss_pred eeEEecccc--cccCCcCCCChhhccHHHHHHHHHhCCC-cCCceEEEEECCCC-CceeeCHHHHHHHh---CCCEEEEe
Confidence 999997532 2222 11 3888999987542 24567899998865 79999999999999 78334799
Q ss_pred ccccc--CCcc-c-ccccc----CccEE---EEcCcccCcCCCCcEEEEEecCccccCCCCCceeccCCCCccccccccc
Q 012991 228 AAHAM--GSIK-I-DVKEI----GADFY---VSNLHKWFFCPPSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIG 296 (452)
Q Consensus 228 ~a~~~--g~~~-~-~~~~~----~~d~~---~~s~~K~l~g~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 296 (452)
+||+. ...+ + +...+ ++|.+ +.|.||.+.+....+++.++..+-...+... .....+.
T Consensus 331 EAhgah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~vd~~~~n~a-----------~~m~~ST 399 (713)
T PRK15399 331 SAWVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEA-----------FMMHTST 399 (713)
T ss_pred ccchhhhhcCcccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCCCHHHHHHH-----------HHHHcCC
Confidence 99863 1111 1 11111 46766 9999999989988899888664221111111 1223357
Q ss_pred ccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcC------CCcCCCcc----c--------c-----
Q 012991 297 TRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWG------TSLGSPPE----I--------C----- 353 (452)
Q Consensus 297 ~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~------~~~~~~~~----~--------~----- 353 (452)
+|++..++++..+..++... .| +.+.+...+++..+++.+.++.+ +++..++. . .
T Consensus 400 SPsY~LmASLD~a~~~m~~~-~G-~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~ 477 (713)
T PRK15399 400 SPSYPIVASVETAAAMLRGN-PG-KRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFK 477 (713)
T ss_pred CcHHHHHHHHHHHHHHHHhh-hh-HHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCccccccc
Confidence 88998888888888888731 14 45666677888888888877644 33333210 0 0
Q ss_pred ----------cceEEEEcCCcc--c--cCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEec
Q 012991 354 ----------AAMVMVGLPSRL--R--VMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARIS 419 (452)
Q Consensus 354 ----------~~~~~~~~~~~~--~--~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis 419 (452)
..=+.+..|... + ...+.++..+.+.|++ +||.+-.. ....+-+-
T Consensus 478 ~~~~~~~~lDP~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e-~gI~~E~~--------------------d~~~vL~l 536 (713)
T PRK15399 478 DADADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDE-RGIVVEKT--------------------GPYNLLFL 536 (713)
T ss_pred ccccccccCCCceEEEEecCcccccccccCCCCHHHHHHHHHH-cCCEEEec--------------------CCCeEEEE
Confidence 000112222100 0 0235678889999965 69998422 22456666
Q ss_pred ccccCCHHHHHHHHHHHHHHHh
Q 012991 420 HQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 420 ~~~~~t~~di~~l~~~l~~~~~ 441 (452)
++..+|.+++++|+++|.++-+
T Consensus 537 ~s~g~t~~~~~~L~~aL~~f~~ 558 (713)
T PRK15399 537 FSIGIDKTKAMGLLRGLTEFKR 558 (713)
T ss_pred eCCCCCHHHHHHHHHHHHHHHH
Confidence 6666799999999999998754
No 309
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.79 E-value=2.3e-16 Score=165.46 Aligned_cols=355 Identities=16% Similarity=0.147 Sum_probs=239.2
Q ss_pred CCCCHHHHHhhhcc---CCCCe-EEeccCCCC-CCcHHHHHHHHHHHHHHhc-CCchh-hhhhhhHHHHHHHHHHHhHhC
Q 012991 22 RCISEAEIRDEFSH---HQHGV-ARINNGSFG-SCPKSVLADQQKWQLKFLQ-QPDDF-YFNSLRKGILESRAAVKDLIN 94 (452)
Q Consensus 22 ~~~~~~~ir~~~~~---~~~~~-~~l~~~~~~-~~p~~v~e~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~la~~~~ 94 (452)
..++..++.++|.. .+..+ -|++.|.++ ..|+.+.+.+.+.-..+.. .|-.. .+.+..+.+-+.++.++++.|
T Consensus 44 ~~~sE~e~~~~~~~la~~N~~~~~fig~G~y~~~~p~~i~r~v~~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtG 123 (939)
T TIGR00461 44 APSKEYEALAHLKKIASKNHKFKSYIGMGYYGTILPPVIQRNLLENPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLTG 123 (939)
T ss_pred CCCCHHHHHHHHHHHHhcCCCccccCCCCcCCCcCChHHHHHHHhCchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHC
Confidence 34566666666543 22222 366777766 4555455455443221111 11110 234556678889999999999
Q ss_pred CCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHH
Q 012991 95 ADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEII 174 (452)
Q Consensus 95 ~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~ 174 (452)
.+ ..+.-+..++|++-+.++.+.... .+++++|++++..|+.....+.-.++..|++++.++ .
T Consensus 124 m~-~aNaSl~d~atA~aEa~~~a~~~~-----~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~-----------~ 186 (939)
T TIGR00461 124 LP-VANASLLDEGTAAAEAMALSFNVS-----KKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD-----------C 186 (939)
T ss_pred CC-hhhhhccchhhHHHHHHHHHHHhh-----cCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc-----------H
Confidence 96 778888999998888777765210 123579999999999998888877888999999882 2
Q ss_pred HHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCccc
Q 012991 175 NEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKW 254 (452)
Q Consensus 175 ~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~ 254 (452)
++|++.+ ++..|++++|++ .|.+.|+++|++++|++|. ++++++-.-......+...+|+|+++.+.+++
T Consensus 187 ~~l~~~~--------~~~~v~~q~Pn~-~G~ied~~~i~~~~h~~ga-l~~~~ad~~al~ll~~Pge~GaDi~vg~~q~f 256 (939)
T TIGR00461 187 SDIKKAV--------DVFGCLLQYPAT-DGSILDYKQLIDALHSHKS-LVSVAADLMALTLLTPPGHYGADIVLGSSQRF 256 (939)
T ss_pred HHHhhcC--------CEEEEEEECCCC-CeEEecHHHHHHHHHHcCC-EEEEEechHHhCCcCCHHHcCCcEEeeCCCcc
Confidence 3344333 467888888765 7999999999999999999 89997665555555677778999998888874
Q ss_pred Cc----CCCCcEEEEEecCccccCCCCCcee--ccC-CCC-ccc--------ccccccccCccccccHHH---H--HHHH
Q 012991 255 FF----CPPSVAFLYCRKSILSSDMHHPVVS--HEF-GNG-LPI--------ESAWIGTRDYSAQLVIPS---A--VTFV 313 (452)
Q Consensus 255 l~----g~~G~G~l~~~~~~~~~~l~~~~~~--~~~-~~~-~~~--------~~~~~~~~~~~~~~~~~~---a--l~~~ 313 (452)
-. |+++.|++.+++++..+ +-.+... .+. |.. +.. -+..-+++|+....++.+ + +.++
T Consensus 257 g~p~g~GGP~aG~~a~~~~l~r~-lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~ 335 (939)
T TIGR00461 257 GVPMGYGGPHAAFFAVKDEYNRK-MPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYH 335 (939)
T ss_pred CCCCCCCCCceeeeeecHhhHhh-CCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHH
Confidence 32 24448999999988876 3222222 111 111 111 112345666654444443 2 3344
Q ss_pred HHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeeccc
Q 012991 314 SRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQ 393 (452)
Q Consensus 314 ~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~ 393 (452)
.. +|++++.+++..++.++.+.|.+ .|+++..++- ..-+.+.++ ..++.++.+.+.++ ||.++.
T Consensus 336 G~--~GL~~iA~~~~~~a~~l~~~L~~-~G~~~~~~~f--F~~~~v~~~-------~~~~~~i~~~~~~~-gi~l~~--- 399 (939)
T TIGR00461 336 GP--KGLKNIARRIHSLTSILANGLEN-DPHELINKTW--FDTLTVKVG-------NGISSELLKAAEEF-NINLRA--- 399 (939)
T ss_pred CH--HHHHHHHHHHHHHHHHHHHHHHh-CCCcccCCCc--cceEEEEeC-------CCCHHHHHHHHHHC-CCeeee---
Confidence 43 38899999999999999999988 4888776521 222333332 23577899998775 999753
Q ss_pred CCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHH
Q 012991 394 APKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVI 437 (452)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~ 437 (452)
..++.+++|+..++|.+||+.+++++.
T Consensus 400 -----------------~~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 400 -----------------VDTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred -----------------cCCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 123589999999999999999999995
No 310
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.79 E-value=3.3e-17 Score=149.51 Aligned_cols=364 Identities=17% Similarity=0.156 Sum_probs=238.3
Q ss_pred HHHHhhhccCCCCeEEeccCCCCCCcHHHHHHHHHHHHHHhc--CCchh-hh-hh-hhHHHHHHHHHHHhHhCCCCCCcE
Q 012991 27 AEIRDEFSHHQHGVARINNGSFGSCPKSVLADQQKWQLKFLQ--QPDDF-YF-NS-LRKGILESRAAVKDLINADDVGEI 101 (452)
Q Consensus 27 ~~ir~~~~~~~~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~--~~~~~-~~-~~-~~~~~~~~~~~la~~~~~~~~~~i 101 (452)
+-|.+|-..+.+++-.. ++-...+.+|.|++-..+.+-.+ .|+.. |+ .. -++...-++++..+.|+++ ++.+
T Consensus 30 ~ii~~Ek~RQ~~gieLI--aSENFts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ld-p~kW 106 (477)
T KOG2467|consen 30 DIIEKEKERQKRGIELI--ASENFTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLD-PEKW 106 (477)
T ss_pred HHHHHHHHhhhcceeEe--ecccchHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCC-HHHC
Confidence 34444443333444333 35567788899999888876432 34332 22 22 2444556788889999996 6643
Q ss_pred ---EEecChhHHHHHHHHHhhcccccCCCCCCCEEEE---eCCcchhHHHHHHHHHHhcCcEEEEE-----eCCCCCC-C
Q 012991 102 ---SLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLM---LHCAFQAVKKSIQAYVTRAGGSVVEV-----QLPFPLA-S 169 (452)
Q Consensus 102 ---~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~---~~~~~~s~~~~~~~~a~~~g~~v~~~-----~~~~~~~-~ 169 (452)
+..-||+.|+..+..++ ++|+++|+- ++..|-++...- .+.++..+ .++..++ +
T Consensus 107 GVNVQp~SGSPANfavYtal--------l~Ph~RiMGLDLP~GGHLsHGy~T------~~kkISa~SiyFeSmPYkv~~~ 172 (477)
T KOG2467|consen 107 GVNVQPYSGSPANFAVYTAL--------LKPHERIMGLDLPSGGHLSHGYQT------PTKKISATSIYFESMPYKVDPS 172 (477)
T ss_pred ceeeccCCCCchhhHHHhhh--------cCCCCeeeeccCCCCCcccccccc------CCceeeeeeeecccCceeeCCC
Confidence 34568889999999987 699999984 444554432211 12222222 2333445 3
Q ss_pred hHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCC-----ccccccccC
Q 012991 170 EEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGS-----IKIDVKEIG 243 (452)
Q Consensus 170 ~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~-----~~~~~~~~~ 243 (452)
.+.+ +|.||+... .-+|++++.- .+.....+|.+++.++|.+.|+ .++.|-||-.|. ++-.+. .
T Consensus 173 TG~IDYD~Le~~A~-----~frPk~iiaG--~SaY~R~~DYaR~R~Iad~~gA-~Lm~DMAHISgLVAA~vipsPFe--y 242 (477)
T KOG2467|consen 173 TGYIDYDKLEKTAT-----LFRPKLIIAG--TSAYSRLIDYARFRKIADKVGA-YLMADMAHISGLVAAGVIPSPFE--Y 242 (477)
T ss_pred CCceehHHHHHHHH-----hcCCcEEEec--cccchhhccHHHHHHHHHhcCc-eeehhhhhHHHHHhcccCCCccc--c
Confidence 4566 999999775 5789998884 4456778999999999999999 899999985543 333333 4
Q ss_pred ccEEEEcCcccCcCCCCcEEEEEecCccccCCCCCceec--cCCCCccccc----ccccccCccccccHHHHHHHHHHhh
Q 012991 244 ADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMHHPVVSH--EFGNGLPIES----AWIGTRDYSAQLVIPSAVTFVSRFE 317 (452)
Q Consensus 244 ~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~~~~~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~~al~~~~~~~ 317 (452)
+|+|+.+.||+|.||+| |+++.|+.+... .+.... .|.....+++ ...|.|.-..+.+++.|+......
T Consensus 243 ~DiVTTTTHKsLRGPRg-~mIFyRkGvk~~---~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tp- 317 (477)
T KOG2467|consen 243 CDIVTTTTHKSLRGPRG-AMIFYRKGVKSI---KPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTP- 317 (477)
T ss_pred cceeeccccccccCCcc-eeEEEeccCCcC---CCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCH-
Confidence 79999999999999998 899998866653 111000 0110000000 112445555778888888887765
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCC
Q 012991 318 GGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKD 397 (452)
Q Consensus 318 ~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~ 397 (452)
.++.+.+++.++++.|.+.|.+. |++++..... .+++.+.+.. .+++...+-..| +..+|.+.....++..
T Consensus 318 -efk~Yq~qV~~Nakala~~l~~~-Gy~lvtgGTD-nHlvLvDLr~-----~G~dGarvE~vl-e~~~I~~NKNtvpGD~ 388 (477)
T KOG2467|consen 318 -EFKEYQKQVLKNAKALASALISR-GYKLVTGGTD-NHLVLVDLRP-----KGVDGARVEKVL-ELCHIALNKNTVPGDK 388 (477)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHc-CceEecCCcc-ceEEEEeccc-----cCCchHHHHHHH-HHhhhhhcCCcCCCCc
Confidence 78999999999999999999987 8887654322 5677776642 345554443333 3347777544444332
Q ss_pred CCCCCCCCCCCCCCccceEEecccccCC----HHHHHHHHHHHHHHHhc
Q 012991 398 DGQPQAGARDKDGIITGYARISHQVYNT----LEDYEKFRDAVILLVEE 442 (452)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~iRis~~~~~t----~~di~~l~~~l~~~~~~ 442 (452)
+ ...++.|||+....+| ++|.+++.+.|.+.++-
T Consensus 389 S-----------al~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~i 426 (477)
T KOG2467|consen 389 S-----------ALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVKI 426 (477)
T ss_pred c-----------ccCCCceeccchhhcccCccHHHHHHHHHHHHHHHHH
Confidence 2 4678899999877766 68899999999888764
No 311
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.78 E-value=2e-17 Score=169.24 Aligned_cols=318 Identities=12% Similarity=0.062 Sum_probs=211.0
Q ss_pred hhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHH-HHHHHHhc
Q 012991 76 NSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKS-IQAYVTRA 154 (452)
Q Consensus 76 ~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~-~~~~a~~~ 154 (452)
...+..+.++++..|+.||++ ...++++|+|.+|..++.++ +++||.|++++.+|.|++.+ +.. .
T Consensus 170 ~~~eG~i~eAq~~AA~~fgAd--~tyFlvNGTS~gn~a~i~a~--------~~~Gd~VLvdRN~HKSv~hgaLiL----s 235 (720)
T PRK13578 170 LIHEGAAKDAQKHAAKVFNAD--KTYFVLNGTSASNKVVTNAL--------LTPGDLVLFDRNNHKSNHHGALIQ----A 235 (720)
T ss_pred CCCChHHHHHHHHHHHHhCCC--ceEEEeCChhHHHHHHHHHh--------cCCCCEEEeecccHHHHHHHHHHH----c
Confidence 344566899999999999996 78888999999999999987 69999999999999999885 544 5
Q ss_pred CcEEEEEeCCCCCCChH--------HH-HHHHHHHHhccc-c--CCCc-eEEEEEeccCCCCcccccHHHHHHH-HHHcC
Q 012991 155 GGSVVEVQLPFPLASEE--------EI-INEFKKGIEKGK-K--DGKM-IRLAIIDHITSMPCVVIPVRKLVKI-CRDEG 220 (452)
Q Consensus 155 g~~v~~~~~~~~~~~~~--------~~-~~~l~~~i~~~~-~--~~~~-~~lv~~~~~~n~tG~~~~l~~i~~l-~~~~~ 220 (452)
|+.++++.+.. +..+ .+ .+.++++|++.. . ...+ .++++++++++ .|.++++++|+++ |+.++
T Consensus 236 Ga~PVYl~P~~--n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~ydi~~I~~~~~h~~~ 312 (720)
T PRK13578 236 GATPVYLETAR--NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYNARQVVDKIGHLCD 312 (720)
T ss_pred CCeEEEeeccc--cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeecHHHHHHHhhccCC
Confidence 99999997532 2221 12 355888887641 1 0113 48999999876 7999999999998 67777
Q ss_pred CCEEEEecccccC--Ccc----c--cccccCcc----EEEEcCcccCcCCCCcEEEEEecCcccc---CCCCCceeccCC
Q 012991 221 VDQVFVDAAHAMG--SIK----I--DVKEIGAD----FYVSNLHKWFFCPPSVAFLYCRKSILSS---DMHHPVVSHEFG 285 (452)
Q Consensus 221 ~~~~ivD~a~~~g--~~~----~--~~~~~~~d----~~~~s~~K~l~g~~G~G~l~~~~~~~~~---~l~~~~~~~~~~ 285 (452)
. +++|+||+.= ..+ + ..-..++| +++.|.||.+.+....+++.++.+.+.. ++....+..
T Consensus 313 -~-llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~~~--- 387 (720)
T PRK13578 313 -Y-ILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRLNN--- 387 (720)
T ss_pred -c-EEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHHHH---
Confidence 3 8999998631 112 1 11234788 9999999998888888888887765431 000001000
Q ss_pred CCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHH-HHHcCCCcCCCccc------------
Q 012991 286 NGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARML-ANAWGTSLGSPPEI------------ 352 (452)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~~------------ 352 (452)
......+.+|++..++++..+..++... .| +.+.+...+++..+++.| ....++++..|+.-
T Consensus 388 ---al~m~qSTSPsY~LmASLDva~~~m~~~-~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~ 462 (720)
T PRK13578 388 ---AFMLHASTSPFYPLFAALDVNAKMHEGE-SG-RRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQ 462 (720)
T ss_pred ---HHHHHcCCChHHHHHHHHHHHHHHHHHh-hC-HHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhh
Confidence 0122335788888888888877777741 24 445566777788888887 55555554432100
Q ss_pred --------------c---------------cceEEEEcCCcc---c--cCChhhHHHHHHHHhhhcceEeeecccCCCCC
Q 012991 353 --------------C---------------AAMVMVGLPSRL---R--VMGEDDALRLRGHLRVRFGVEVPIHYQAPKDD 398 (452)
Q Consensus 353 --------------~---------------~~~~~~~~~~~~---~--~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~ 398 (452)
. ..=+.+..+... + ...+..+..+.+.|+++ ||.+-..
T Consensus 463 ~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~-gI~~E~~------- 534 (720)
T PRK13578 463 IASDLRFFSFEPGEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLREN-GIVPEKC------- 534 (720)
T ss_pred hcccccccccccCccccccccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHHHc-CCEEEec-------
Confidence 0 000112222100 0 00122367899999776 9988422
Q ss_pred CCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 399 GQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 399 ~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
....+-+-++..+|.+++++|+++|.++.+
T Consensus 535 -------------d~~~vL~l~s~g~t~~~~~~Lv~aL~~f~~ 564 (720)
T PRK13578 535 -------------DLNSILFLLTPAEDMAKLQQLVAMLARFEK 564 (720)
T ss_pred -------------CCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 123444444555799999999999998854
No 312
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.78 E-value=4e-16 Score=155.42 Aligned_cols=345 Identities=12% Similarity=0.132 Sum_probs=205.8
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|...+.+.+++.+.+.... ... +.....+...++.+++++++.....+.++|+++||+|++.++. ++|.+
T Consensus 46 ~lGh~~p~v~~a~~~ql~~~~-~~~--~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~Alk-lAr~~---- 117 (420)
T TIGR00700 46 NIGHSHPRVVDAVRTQVAEFT-HTC--FMVTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVK-IARSY---- 117 (420)
T ss_pred cCCCCCHHHHHHHHHHHHhcc-Ccc--ccccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHH-HHHHh----
Confidence 346777889999999886531 111 1112234456677778887753223689999999999999998 45544
Q ss_pred CCCCCEEEEeCCcchhHHHHHHHHHH-----hcCc-----EEEEEeCCCCCC-------ChHH-HHHHHHHHHhccccCC
Q 012991 127 FHRNDTVLMLHCAFQAVKKSIQAYVT-----RAGG-----SVVEVQLPFPLA-------SEEE-IINEFKKGIEKGKKDG 188 (452)
Q Consensus 127 ~~~g~~Vl~~~~~~~s~~~~~~~~a~-----~~g~-----~v~~~~~~~~~~-------~~~~-~~~~l~~~i~~~~~~~ 188 (452)
..+.+|+....+|++.......+.. +.+. .+..++.+.+.. .... .++.+++.+... ...
T Consensus 118 -tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 195 (420)
T TIGR00700 118 -TGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVID-VGA 195 (420)
T ss_pred -cCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhh-cCC
Confidence 3456788888888886544432211 0111 122233211100 0111 145666665311 114
Q ss_pred CceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEEEEcCcccCcCCC
Q 012991 189 KMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLHKWFFCPP 259 (452)
Q Consensus 189 ~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~l~g~~ 259 (452)
+++.+|+++.....+|...+ +++|.++|++||+ ++|.|++++ +|... .+.....+|+++ ++|.+.++.
T Consensus 196 ~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gi-llI~DEV~tg~gr~g~~~a~~~~~~~pDi~~--lsK~l~~G~ 272 (420)
T TIGR00700 196 NNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGI-VFIADEVQTGFARTGAMFACEHEGPEPDLIT--TAKSLADGL 272 (420)
T ss_pred CcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCC-EEEEEecccCCcccchhHHHhhcCCCCCEEE--eeccccCCc
Confidence 67999999999888998876 8899999999999 799999976 32221 122223578776 569876555
Q ss_pred CcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHH
Q 012991 260 SVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLA 339 (452)
Q Consensus 260 G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~ 339 (452)
-+|++++++++.+. + .+.. ...+ ...+...+.+..++++.+.+ +.+.++..++.+++.+.|.
T Consensus 273 pig~v~~~~~i~~~-~-~~~~---------~~~T--~~~~pl~~aaa~a~l~~l~~-----~~~~~~~~~~g~~l~~~L~ 334 (420)
T TIGR00700 273 PLSGVTGRAEIMDA-P-APGG---------LGGT--YAGNPLACAAALAVLAIIES-----EGLIERARQIGRLVTDRLT 334 (420)
T ss_pred ceEEEEecHHHHhh-c-CCCC---------cCCC--CCcCHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHHH
Confidence 58999998887765 2 1110 0111 11222333444445666553 2356666777777777776
Q ss_pred HHcC-CCcCCCcccccceEEEEcCCcc-ccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEE
Q 012991 340 NAWG-TSLGSPPEICAAMVMVGLPSRL-RVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYAR 417 (452)
Q Consensus 340 ~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iR 417 (452)
++.. ..........+.++++.+.+.. ...+......+.+.+.+ .||.+.++..+ ++++|
T Consensus 335 ~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~-~Gv~i~p~~~f------------------~~~lR 395 (420)
T TIGR00700 335 TLKAVDPRIGDVRGLGAMIAVELVDPGTTEPDAGLAERIATAAHA-AGLLLLTCGMF------------------GNIIR 395 (420)
T ss_pred HHHhhCCCEEEeeccceEEEEEEecCCCCCccHHHHHHHHHHHHH-CCeEEeccCCC------------------CCEEE
Confidence 6522 1111111123667777652110 00112234566666655 59998543211 36899
Q ss_pred ecccccCCHHHHHHHHHHHHHHHh
Q 012991 418 ISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 418 is~~~~~t~~di~~l~~~l~~~~~ 441 (452)
++++...++++++..+++|.+++.
T Consensus 396 l~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 396 FLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred EECCCCcCHHHHHHHHHHHHHHhh
Confidence 999876789999999999998874
No 313
>PRK07678 aminotransferase; Validated
Probab=99.78 E-value=2.2e-16 Score=158.05 Aligned_cols=357 Identities=11% Similarity=0.116 Sum_probs=212.1
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|...+.+.+++.+.+....... . ....+...++.++|+++++.. +.++|++|||+|++.++. ++|.|+...
T Consensus 60 ~lGh~~p~v~~ai~~q~~~~~~~~-~---~~~~~~~~~lae~l~~~~~~~--~~v~f~~sGseA~e~Alk-lAr~~t~~~ 132 (451)
T PRK07678 60 NVGYGRKELAEAAYEQLKTLSYFP-L---TQSHEPAIKLAEKLNEWLGGE--YVIFFSNSGSEANETAFK-IARQYHAQK 132 (451)
T ss_pred cCCCCCHHHHHHHHHHHHhcCccc-c---ccCCHHHHHHHHHHHHhCCCC--CEEEEeCCcHHHHHHHHH-HHHHHHHhc
Confidence 346777889999998876532111 1 112344567888888887653 589999999999999998 555553211
Q ss_pred CCC-CCEEEEeCCcchhHHHHHHHHHHhc---------CcEEEEEeCCC----CCC---ChHHH--HHHHHHHHhccccC
Q 012991 127 FHR-NDTVLMLHCAFQAVKKSIQAYVTRA---------GGSVVEVQLPF----PLA---SEEEI--INEFKKGIEKGKKD 187 (452)
Q Consensus 127 ~~~-g~~Vl~~~~~~~s~~~~~~~~a~~~---------g~~v~~~~~~~----~~~---~~~~~--~~~l~~~i~~~~~~ 187 (452)
-++ ..+|+.....|++.......+.... ...+..++.+. +.. +.... .+.+++.++.. .
T Consensus 133 g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~ 210 (451)
T PRK07678 133 GEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWE--L 210 (451)
T ss_pred CCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhc--C
Confidence 112 3688888888888554332211000 01122232210 000 01111 55677777521 1
Q ss_pred CCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEeccc-ccCCcc----ccccccCccEEEEcCcccCcCC
Q 012991 188 GKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAH-AMGSIK----IDVKEIGADFYVSNLHKWFFCP 258 (452)
Q Consensus 188 ~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~-~~g~~~----~~~~~~~~d~~~~s~~K~l~g~ 258 (452)
.+++.+|+++......|.+.| ++++.++|++||+ ++|+|+++ ++|-.. .+.....+|+++++ |.+.|+
T Consensus 211 ~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~-llI~DEV~tGfGRtG~~~~~~~~gv~PDivt~g--K~lggG 287 (451)
T PRK07678 211 SETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGA-LLISDEVICGFGRTGKAFGFMNYGVKPDIITMA--KGITSA 287 (451)
T ss_pred CCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCC-EEEEeehhhcCCcCchhHHHHhcCCCCCEEEee--cccccC
Confidence 467999999988887888876 7899999999999 99999998 454432 22223458999886 988765
Q ss_pred -CCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Q 012991 259 -PSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARM 337 (452)
Q Consensus 259 -~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~ 337 (452)
..+|.+++++++.+. + .+... . .......++ ..+..+..+..++++.+.+ +.+.++.+++.++|.+.
T Consensus 288 ~~Pi~av~~~~~i~~~-~-~~~~~--~-~~~~h~~T~--~gnp~~~aaa~a~l~~l~~-----~~~~~~~~~~g~~l~~~ 355 (451)
T PRK07678 288 YLPLSATAVKKEIYEA-F-KGKGE--Y-EHFRHVNTF--GGNPAACALALKNLEIMEN-----ENLIERSAQLGELLLEQ 355 (451)
T ss_pred CcceeEEEEcHHHHHH-H-hccCc--c-cccccCCCC--CcCHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHHH
Confidence 248898999888764 2 11000 0 000001111 1122233333445555543 34677888888898888
Q ss_pred HHHHc-CCCcCCCcccccceEEEEcCCcc--ccC-ChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCcc
Q 012991 338 LANAW-GTSLGSPPEICAAMVMVGLPSRL--RVM-GEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIIT 413 (452)
Q Consensus 338 L~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (452)
|.++. ...++......+.++.+.+.... ... +......+...|.++ ||.+....... ....
T Consensus 356 l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~-Gv~~~~~g~~v--------------~~~~ 420 (451)
T PRK07678 356 LKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVAACKEK-GLIIGKNGDTV--------------AGYN 420 (451)
T ss_pred HHHHHhcCCCEEEEEeeceEEEEEEecCCcccCcCchHHHHHHHHHHHHC-CcEEeecCccc--------------cCCC
Confidence 86542 22222222233555555552100 000 112245778888765 99985321100 0123
Q ss_pred ceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 414 GYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 414 ~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
+.+|++++..+|++||+++++++.++++.
T Consensus 421 ~~lrl~Ppl~it~~eid~~~~~l~~~l~~ 449 (451)
T PRK07678 421 NVLTLSPPLVISSEEIAFIVGTLKTALER 449 (451)
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 68999999999999999999999998853
No 314
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.78 E-value=1.3e-16 Score=158.23 Aligned_cols=344 Identities=11% Similarity=0.091 Sum_probs=207.5
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|..++.+.+++.+.+....... ......+...++.++|+++++.+ .+.+.|++|||+|++.++. ++|.+....
T Consensus 56 ~lGh~~p~i~~Ai~~q~~~~~~~~---~~~~~~~~~~~la~~L~~~~p~~-~~~v~f~~SGsEAve~Alk-lAr~~~~~~ 130 (428)
T PRK07986 56 IHGYNHPQLNAAMKSQIDAMSHVM---FGGITHPPAIELCRKLVAMTPQP-LECVFLADSGSVAVEVAMK-MALQYWQAK 130 (428)
T ss_pred cCCCCCHHHHHHHHHHHhhcCCcc---ccccCCHHHHHHHHHHHhhCCCC-cCEEEEeCCcHHHHHHHHH-HHHHHHHhc
Confidence 446777889999998876532111 11112345677788888887543 4689999999999999998 445442110
Q ss_pred CCCCCEEEEeCCcchhHHHHHHHHHHh-------cC---cEEEEEeCCCCCC-C-h-HHHHHHHHHHHhccccCCCceEE
Q 012991 127 FHRNDTVLMLHCAFQAVKKSIQAYVTR-------AG---GSVVEVQLPFPLA-S-E-EEIINEFKKGIEKGKKDGKMIRL 193 (452)
Q Consensus 127 ~~~g~~Vl~~~~~~~s~~~~~~~~a~~-------~g---~~v~~~~~~~~~~-~-~-~~~~~~l~~~i~~~~~~~~~~~l 193 (452)
-..+.+|+....+|++.......+... .+ ..+..++.+.... . . ....+++++.+++. .+++.+
T Consensus 131 g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~---~~~iaa 207 (428)
T PRK07986 131 GEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAH---RHEIAA 207 (428)
T ss_pred CCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhC---CCcEEE
Confidence 123568999988888754332211000 00 0112232211000 0 0 12267788878532 457889
Q ss_pred EEEecc-CCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEEEEcCcccCcCC-CCcE
Q 012991 194 AIIDHI-TSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLHKWFFCP-PSVA 262 (452)
Q Consensus 194 v~~~~~-~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~l~g~-~G~G 262 (452)
|+++.. +...|...+ +++|.++|++||+ ++|+|+++. +|-.. .+.....+|++++ .|.+.|+ ..+|
T Consensus 208 vi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~-lLI~DEv~tG~GrtG~~fa~~~~gv~PDi~t~--gK~l~gG~~p~~ 284 (428)
T PRK07986 208 VILEPIVQGAGGMRIYHPEWLKRVRKLCDREGI-LLIADEIATGFGRTGKLFACEHAGIAPDILCL--GKALTGGTMTLS 284 (428)
T ss_pred EEEechhcCcCCcccCCHHHHHHHHHHHHHcCC-EEEEeccccCCccCCCeeeecccCCCCCEEEe--chhhhCCcccCc
Confidence 999875 555566432 7899999999999 899999984 33221 1233346898875 5987655 2467
Q ss_pred EEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHc
Q 012991 263 FLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAW 342 (452)
Q Consensus 263 ~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~ 342 (452)
.+++++++.+. +. +.. ........++. .+.....+..++++.+.+ +.+.++.+++.+++.+.|.++.
T Consensus 285 av~~~~~i~~~-~~-~~~----~~~~~~~~T~~--g~p~~~aaa~a~L~~i~~-----~~~~~~~~~~g~~l~~~l~~l~ 351 (428)
T PRK07986 285 ATLTTREVAET-IS-NGE----AGCFMHGPTFM--GNPLACAVANASLSLLES-----GDWQQQVAAIEAQLREELAPLR 351 (428)
T ss_pred chhchHHHHHH-hh-cCC----CCccccCCCCC--cCHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHh
Confidence 77788877764 21 100 00000011111 222233334445555553 2458888899999999988763
Q ss_pred CCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccc
Q 012991 343 GTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQV 422 (452)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 422 (452)
....+......+.++.+.+. +......+.+.|.++ |+.+... ++.+|+.++.
T Consensus 352 ~~~~i~~vRg~Gl~~~ve~~------~~~~~~~~~~~l~~~-Gl~~~~~---------------------g~~i~~~Ppl 403 (428)
T PRK07986 352 DAPMVADVRVLGAIGVVETT------RPVNMAALQRFFVEQ-GVWIRPF---------------------GKLIYLMPPY 403 (428)
T ss_pred cCCCEEeEeccceEEEEEeC------CcccHHHHHHHHHHC-CcEEEec---------------------CCEEEEeCCC
Confidence 33322222234556666553 122356788888764 9988521 2589999998
Q ss_pred cCCHHHHHHHHHHHHHHHhc
Q 012991 423 YNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 423 ~~t~~di~~l~~~l~~~~~~ 442 (452)
..|++||++++++|.+.++.
T Consensus 404 ~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 404 IILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred CCCHHHHHHHHHHHHHHHhh
Confidence 89999999999999999864
No 315
>PRK06541 hypothetical protein; Provisional
Probab=99.78 E-value=1.7e-16 Score=158.84 Aligned_cols=353 Identities=10% Similarity=0.076 Sum_probs=210.8
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|..++.+.+++.+.+.... .... + ....+...++.+++++++..+ .+.+.|+++||+|++.++. ++|.+....
T Consensus 65 ~lGh~~p~v~~Av~~q~~~~~-~~~~-~-~~~~~~~~~la~~l~~~~p~~-~~~v~f~~sGseAve~Alk-lAr~~~~~~ 139 (460)
T PRK06541 65 QVGHGRAELAEAAAKQAGTLA-FFPL-W-SYAHPPAIELAERLAALAPGD-LNRVFFTTGGSEAVESAWK-LAKQYFKLT 139 (460)
T ss_pred cCCCCCHHHHHHHHHHHhhCc-Cccc-c-ccCCHHHHHHHHHHHHhCCCC-cCEEEEcCCcHHHHHHHHH-HHHHHHHhc
Confidence 456777889999998886531 1111 0 112345567778888887543 4689999999999999998 445442100
Q ss_pred CC-CCCEEEEeCCcchhHHHHHHHHHHh----c--C---cEEEEEeCCC----C-CCCh----HH-HHHHHHHHHhcccc
Q 012991 127 FH-RNDTVLMLHCAFQAVKKSIQAYVTR----A--G---GSVVEVQLPF----P-LASE----EE-IINEFKKGIEKGKK 186 (452)
Q Consensus 127 ~~-~g~~Vl~~~~~~~s~~~~~~~~a~~----~--g---~~v~~~~~~~----~-~~~~----~~-~~~~l~~~i~~~~~ 186 (452)
-. .+.+|+....+|++.......+... . + ..+..++.+. + ..++ .. .++.+++.+++.
T Consensus 140 g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-- 217 (460)
T PRK06541 140 GKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFE-- 217 (460)
T ss_pred CCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--
Confidence 01 2468998888888765433221110 0 0 1122232211 0 0011 11 146778777531
Q ss_pred CCCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEeccc-ccCCccc----cccccCccEEEEcCcccCcC
Q 012991 187 DGKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAH-AMGSIKI----DVKEIGADFYVSNLHKWFFC 257 (452)
Q Consensus 187 ~~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~-~~g~~~~----~~~~~~~d~~~~s~~K~l~g 257 (452)
...++.+|+++...++.|.+.+ +++|.++|++||+ ++|+|+++ ++|-... ......+|++++ +|.+.+
T Consensus 218 ~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~-llI~DEV~tGfGR~G~~~a~~~~gv~PDivt~--gK~l~~ 294 (460)
T PRK06541 218 GPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDV-LLVSDEVICAFGRLGEMFGCERFGYVPDIITC--AKGITS 294 (460)
T ss_pred CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCC-EEEEechhhCCCcCchhhhhhhcCCCCCEEEe--cccccC
Confidence 1356889999988999999988 8999999999999 89999998 5653321 112235898875 598776
Q ss_pred CC-CcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 012991 258 PP-SVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMAR 336 (452)
Q Consensus 258 ~~-G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~ 336 (452)
+. .+|.+++++++.+. +.... .. .....+ ...+.....+..+.++.+.+ +.+.++++++.++|.+
T Consensus 295 G~~pigav~~~~~i~~~-~~~~~-~~-----~~~~~T--~~gnp~~~aaala~l~~l~~-----~~~~~~~~~~g~~l~~ 360 (460)
T PRK06541 295 GYSPLGAMIASDRLFEP-FLDGP-TM-----FLHGYT--FGGHPVSAAVALANLDIFER-----EGLLDHVRDNEPAFRA 360 (460)
T ss_pred CccceeEEEEcHHHHHH-hhcCC-Cc-----cccCCC--CCCCHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHH
Confidence 43 47888888887764 11110 00 000000 11111222333334444442 3467888999999999
Q ss_pred HHHHHcCCCcCCCcccccceEEEEcCCccccC----Chh----hHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCC
Q 012991 337 MLANAWGTSLGSPPEICAAMVMVGLPSRLRVM----GED----DALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDK 408 (452)
Q Consensus 337 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~----~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~ 408 (452)
.|.++....++......+.++.+.+.+..... ... -...+.+.|.++ ||.+....
T Consensus 361 ~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~---------------- 423 (460)
T PRK06541 361 TLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEA-GLYCRADD---------------- 423 (460)
T ss_pred HHHHhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhC-CeEEEecC----------------
Confidence 99887433332222233556666552100000 000 112566777664 99985310
Q ss_pred CCCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 409 DGIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 409 ~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
...+.+|+++....|++||+.++++|.+.+..
T Consensus 424 --~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~ 455 (460)
T PRK06541 424 --RGDPVVQLAPPLISGQEEFDEIEQILRSVLTE 455 (460)
T ss_pred --CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 12368999999889999999999999999864
No 316
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.78 E-value=1.7e-16 Score=157.48 Aligned_cols=344 Identities=10% Similarity=0.083 Sum_probs=210.0
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|...+.+.+++.+.+.... .... .....+...++.+++++.+..+ .+.+.|+++|++|++.++. ++|++....
T Consensus 57 ~lGh~~p~v~~ai~~q~~~~~-~~~~--~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~sGseAve~Alk-lAr~~~~~~ 131 (429)
T PRK06173 57 LHGYNHPRLNAAATNQLAKMS-HIMF--GGFTHEPAVELAQKLLEILPPS-LNKIFFADSGSVAVEVAMK-MALQYQQAK 131 (429)
T ss_pred cCCCCCHHHHHHHHHHHHhcC-Cccc--cccCCHHHHHHHHHHHhhCCCC-cCEEEEeCCchHHHHHHHH-HHHHHHHHh
Confidence 346777889999998876532 1111 1112345677888888887542 4699999999999999998 455442111
Q ss_pred CCC-CCEEEEeCCcchhHHHHHHHHHH-----hcC-----cEEEEEeCCCCC--CChHH-HHHHHHHHHhccccCCCceE
Q 012991 127 FHR-NDTVLMLHCAFQAVKKSIQAYVT-----RAG-----GSVVEVQLPFPL--ASEEE-IINEFKKGIEKGKKDGKMIR 192 (452)
Q Consensus 127 ~~~-g~~Vl~~~~~~~s~~~~~~~~a~-----~~g-----~~v~~~~~~~~~--~~~~~-~~~~l~~~i~~~~~~~~~~~ 192 (452)
-++ +.+|+....+||+.......+.. +.+ ..+..++.+... ..... .++.+++.++.. .++++
T Consensus 132 g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~---~~~iA 208 (429)
T PRK06173 132 GEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQK---GDEIA 208 (429)
T ss_pred CCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhC---CCcEE
Confidence 123 45788888888874322111100 000 012223221000 01111 267778888532 46799
Q ss_pred EEEEecc-CCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEEEEcCcccCcCCC-Cc
Q 012991 193 LAIIDHI-TSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLHKWFFCPP-SV 261 (452)
Q Consensus 193 lv~~~~~-~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~l~g~~-G~ 261 (452)
+|+++.. ....|.+.| +++|.++|++||+ ++|+|++|. +|-.. .+.....+|++++ .|.+.|+. .+
T Consensus 209 Avi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~-llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~--gK~l~gG~~p~ 285 (429)
T PRK06173 209 ALILEPVVQGAGGMYFYSPTYLVKARELCDQYGV-LLIFDEIATGFGRTGKLFALEHAGVVPDIMCI--GKALTGGYLTL 285 (429)
T ss_pred EEEEcchhhccCCcccCCHHHHHHHHHHHHHcCC-eEEecchhcCCCcCCcchHHHhcCCCCCEEEe--ehhhhCCcccc
Confidence 9999985 777788754 7789999999999 899999984 22221 1222335898884 69886552 36
Q ss_pred EEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHH
Q 012991 262 AFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANA 341 (452)
Q Consensus 262 G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 341 (452)
+.++.++++.+. +. +. .........++ ..+.....+..++++.+.+ +.+.++++++.++|.+.|.++
T Consensus 286 ~a~~~~~~i~~~-~~-~~----~~~~~~~~~T~--~g~p~~~aaa~a~l~~i~~-----~~~~~~~~~~g~~l~~~L~~~ 352 (429)
T PRK06173 286 SATITTEAIAQT-IC-SG----EAKCFMHGPTF--MANPLACAIAAESIRLLLE-----SPWQQNIQRIEAQLKQELAPA 352 (429)
T ss_pred ceEEecHHHHHH-Hh-cC----CCCccccCCCC--CcCHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHHHHHHh
Confidence 777788777654 21 10 00000000011 1222333444455666654 235778889999999999865
Q ss_pred cCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEeccc
Q 012991 342 WGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQ 421 (452)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~ 421 (452)
.+...+......+.++.+.+. +..+...+.+.|.++ ||.+... ++.+|+.++
T Consensus 353 ~~~~~v~~vRg~Gl~~~iel~------~~~~~~~i~~~l~e~-Gi~v~~~---------------------g~~l~~~Pp 404 (429)
T PRK06173 353 AEFDSVAEVRVLGAIGVVEMK------EPVNMATLQPRFVEH-GIWVRPF---------------------GKLVYIMPP 404 (429)
T ss_pred hcCCCeeeeeccceEEEEEeC------CcccHHHHHHHHHHC-CeEEEec---------------------CCEEEEeCC
Confidence 344333222234666667664 223456788888775 9998521 258999999
Q ss_pred ccCCHHHHHHHHHHHHHHHhc
Q 012991 422 VYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 422 ~~~t~~di~~l~~~l~~~~~~ 442 (452)
...|++|++.++++|++.+..
T Consensus 405 l~it~~ei~~~~~~l~~~l~~ 425 (429)
T PRK06173 405 FIISPDELSQLTSGLLRVLKQ 425 (429)
T ss_pred ccCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999864
No 317
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.78 E-value=1.2e-16 Score=159.72 Aligned_cols=329 Identities=14% Similarity=0.131 Sum_probs=193.6
Q ss_pred CCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCC
Q 012991 48 FGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRF 127 (452)
Q Consensus 48 ~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~ 127 (452)
.|..++.|.+++.+.+.... . + ....+...+++++|++++... +.++|++||++|+..++... |.+
T Consensus 62 lGh~~p~v~~ai~~q~~~~~----~-~-~~~~~~~~~lae~l~~~~~~~--~~v~~~~sGseA~e~Alk~a-r~~----- 127 (423)
T TIGR00713 62 LGHAHPRVVEAVKEALERGT----S-Y-GAPTEAEILLAKEIISRVPSV--EMVRFVNSGTEATMSAVRLA-RGY----- 127 (423)
T ss_pred cCCCCHHHHHHHHHHHHhCC----c-C-CCCCHHHHHHHHHHHHhCCcc--cEEEEeCCHHHHHHHHHHHH-HHh-----
Confidence 46788889999999876521 1 1 123456788999999988653 68999999999999999854 333
Q ss_pred CCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCC-------------CCCCChHHHHHHHHHHHhccccCCCceEEE
Q 012991 128 HRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLP-------------FPLASEEEIINEFKKGIEKGKKDGKMIRLA 194 (452)
Q Consensus 128 ~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~-------------~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv 194 (452)
..+++|++.+++|++.......+.. .+......+.. .+.+ .++++++.+++. ..++++|
T Consensus 128 ~gr~~ii~~~~~yhG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----d~~~l~~~i~~~---~~~~aav 199 (423)
T TIGR00713 128 TGRDKIIKFEGCYHGHHDALLVKAG-SGAATLGLPTSPGVPEDFAKLTLVLPYN----DLEALEEVFEEY---GEEIAGV 199 (423)
T ss_pred hCCCEEEEEcCCCCCChhhhhcccc-CcccccCCCCCCCCCcccccceEEeCCC----CHHHHHHHHHHc---CCcEEEE
Confidence 4568999999999986433322100 01000000000 0111 167888888532 3578888
Q ss_pred EEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccccCCc--c--ccccccCccEEEEcCcccCcCCCCcEEEEE
Q 012991 195 IIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHAMGSI--K--IDVKEIGADFYVSNLHKWFFCPPSVAFLYC 266 (452)
Q Consensus 195 ~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~~g~~--~--~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~ 266 (452)
+++...+.+|.+.| +++|.++|++||+ ++|+|+++..... . .......+|++ +++|.+.++..+|++++
T Consensus 200 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~-llI~DEv~~g~r~g~~~~~~~~~~~pDi~--t~sK~l~~G~pig~v~~ 276 (423)
T TIGR00713 200 IVEPVAGNMGVVPPKPEFLAGLRALTEEYGS-LLIFDEVMTGFRVALGGAQEYFGVEPDLT--TLGKIIGGGLPVGAFGG 276 (423)
T ss_pred EEeCCCCCCCCcCCCHHHHHHHHHHHHHhCC-EEEEEccccccccCcchhHHHhCCCcchh--hhhhhhcCCCceeeeeE
Confidence 88755555898877 6799999999999 8999999853221 1 11122346765 57798654333799999
Q ss_pred ecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHc---C
Q 012991 267 RKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAW---G 343 (452)
Q Consensus 267 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~---~ 343 (452)
++++.+. +.... . .....+...+...+.+..++++.+.+. + +.++.+++.+++++.|.++. +
T Consensus 277 ~~~i~~~-~~~~~-~--------~~~~~T~~~~~~~~aaa~a~l~~~~~~--~---~~~~~~~~~~~~~~~l~~~~~~~~ 341 (423)
T TIGR00713 277 RREIMER-LAPEG-P--------VYQAGTLSGNPLAMAAGLATLKLLDEE--G---VYTELDELAKRLAEGLSEVLEDTG 341 (423)
T ss_pred HHHHHHh-hCcCC-C--------eeeccCCCCCHHHHHHHHHHHHHHhcc--c---HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 8887765 21100 0 000001122333344444556655531 2 34455555555555554321 3
Q ss_pred CCcCCCcccccceEEEEcCCc--ccc-----CChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceE
Q 012991 344 TSLGSPPEICAAMVMVGLPSR--LRV-----MGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYA 416 (452)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i 416 (452)
+.. .....+.++.+.+... .+. .+......+.+.|.+ .||.++.. ..+.+
T Consensus 342 ~~~--~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~--------------------~~~~~ 398 (423)
T TIGR00713 342 IPH--TVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLD-KGVFLPPS--------------------QFEAC 398 (423)
T ss_pred CCe--EEEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHH-CCeEEecC--------------------Cccce
Confidence 221 1111244544433210 000 001123467778876 59998521 12457
Q ss_pred EecccccCCHHHHHHHHHHHHHHHh
Q 012991 417 RISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 417 Ris~~~~~t~~di~~l~~~l~~~~~ 441 (452)
|+++. .|++|++.++++|.++++
T Consensus 399 ~l~~~--~t~~~i~~~~~~l~~~l~ 421 (423)
T TIGR00713 399 FLSAA--HTEEDIENTIEAAEEVFA 421 (423)
T ss_pred eeECC--CCHHHHHHHHHHHHHHHh
Confidence 88876 499999999999998875
No 318
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.77 E-value=7.1e-17 Score=155.63 Aligned_cols=350 Identities=13% Similarity=0.125 Sum_probs=221.5
Q ss_pred CCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCC
Q 012991 49 GSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFH 128 (452)
Q Consensus 49 ~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~ 128 (452)
|.--+.+.+++.+.+....-. .. +.....+ ..++.++|+++....+-+.|+|++|||+|++.++. ++++|++..-+
T Consensus 59 Gh~~~~i~~Ai~~Q~~~l~~~-~~-~~~t~~P-a~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlK-ma~qY~~~~G~ 134 (449)
T COG0161 59 GHGRPEIAEAIKKQLDKLPHV-MF-GGFTHEP-AIELAEKLAELAPEGGLDHVFFTDSGSEAVETALK-MALQYWRARGQ 134 (449)
T ss_pred CcCCHHHHHHHHHHHHhCCch-hh-cccCCch-HHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHH-HHHHHHHhcCC
Confidence 556677999998888764211 11 1122223 67888899999884336899999999999999998 66776544344
Q ss_pred CC-CEEEEeCCcchhHHHHHHHHHH----h---cC---cEEEEEeCCCC------CCChH---HHHHHHHHHHhccccCC
Q 012991 129 RN-DTVLMLHCAFQAVKKSIQAYVT----R---AG---GSVVEVQLPFP------LASEE---EIINEFKKGIEKGKKDG 188 (452)
Q Consensus 129 ~g-~~Vl~~~~~~~s~~~~~~~~a~----~---~g---~~v~~~~~~~~------~~~~~---~~~~~l~~~i~~~~~~~ 188 (452)
+. .+++.-...|++...+...+.. + .+ ..+..++.+.. .+.+. ...++|++.|.+. +
T Consensus 135 p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~---g 211 (449)
T COG0161 135 PQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEH---G 211 (449)
T ss_pred CcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhc---C
Confidence 53 4588878888775544322211 0 00 11222322211 01122 3378899888764 4
Q ss_pred -CceEEEEEeccCCC-Cccccc----HHHHHHHHHHcCCCEEEEeccc-ccCCcc----ccccccCccEEEEcCcccCcC
Q 012991 189 -KMIRLAIIDHITSM-PCVVIP----VRKLVKICRDEGVDQVFVDAAH-AMGSIK----IDVKEIGADFYVSNLHKWFFC 257 (452)
Q Consensus 189 -~~~~lv~~~~~~n~-tG~~~~----l~~i~~l~~~~~~~~~ivD~a~-~~g~~~----~~~~~~~~d~~~~s~~K~l~g 257 (452)
+++.+|+++..... .|++.| +++|.++|++||+ ++|.|++- ++|-.. .+-....+|+++.+ |.|.|
T Consensus 212 ~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~I-LlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~~a--KGLT~ 288 (449)
T COG0161 212 PETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGI-LLIADEVATGFGRTGKMFACEHAGIVPDILCLA--KGLTG 288 (449)
T ss_pred cccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCc-EEEeecceeCCCcCchhhhhhhcCCCCCeeeec--ccccc
Confidence 67899999888776 788776 7899999999999 99999975 344321 12223468999988 87755
Q ss_pred C-CCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 012991 258 P-PSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMAR 336 (452)
Q Consensus 258 ~-~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~ 336 (452)
+ ..+|.+++++++.+. +.... ...+.+|......-+++++|++-++-+ ..+.+.++.+++..++.+
T Consensus 289 GY~Pl~a~l~~~~I~~~-~~~~~----------~~~f~HG~TYsghPlacAaAla~L~i~--e~e~l~~~~~~~~~~l~~ 355 (449)
T COG0161 289 GYLPLSAVLTSDRIYEA-FSDGD----------AGAFMHGHTYSGNPLACAAALANLDIL--EEEDLLERVAEIGAYLQA 355 (449)
T ss_pred cchhhHhHhhhHHHHHH-Hhccc----------CCeeccCCccccCHHHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHH
Confidence 3 337777888877775 22211 111112222222334445555555544 335678889999999999
Q ss_pred HHHH-HcCCCcCCCcccccceEEEEcCCccccCC---hhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCc
Q 012991 337 MLAN-AWGTSLGSPPEICAAMVMVGLPSRLRVMG---EDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGII 412 (452)
Q Consensus 337 ~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~ 412 (452)
.|.+ +.+-..+......+.+..+.+-...+.+. ..-...+...+.++ |+.+++.
T Consensus 356 ~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~-Gl~iRp~--------------------- 413 (449)
T COG0161 356 GLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALER-GLLIRPL--------------------- 413 (449)
T ss_pred HHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHC-CeEEeec---------------------
Confidence 9987 43334444444446666666532111111 01145677777665 9999743
Q ss_pred cceEEecccccCCHHHHHHHHHHHHHHHhcc
Q 012991 413 TGYARISHQVYNTLEDYEKFRDAVILLVEEG 443 (452)
Q Consensus 413 ~~~iRis~~~~~t~~di~~l~~~l~~~~~~~ 443 (452)
+..+=+++.+..|++||+++++++++.+++.
T Consensus 414 g~~i~~~PPliit~~eid~l~~~l~~al~~~ 444 (449)
T COG0161 414 GDVIYLMPPLIITREEIDELVDALREALDET 444 (449)
T ss_pred CCEEEEcCCccCCHHHHHHHHHHHHHHHHHH
Confidence 2478899998899999999999999998753
No 319
>PRK06062 hypothetical protein; Provisional
Probab=99.77 E-value=6.8e-16 Score=154.35 Aligned_cols=341 Identities=12% Similarity=0.110 Sum_probs=208.8
Q ss_pred CCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCC
Q 012991 48 FGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRF 127 (452)
Q Consensus 48 ~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~ 127 (452)
.|...+.|.+++.+.+....... . ....+...++.++|+++...+ .+.+.|++|||+|++.++.. +|.+
T Consensus 67 lGh~~p~v~~Ai~~q~~~~~~~~-~---~~~~~~~~~lae~L~~~~p~~-~~~v~f~~SGsEAve~Alkl-Ar~~----- 135 (451)
T PRK06062 67 IGHQHPKVVAAIQEQAARLCTVA-P---AHANDARSEAARLIAERAPGD-LSKVFFTNGGADANEHAVRM-ARLH----- 135 (451)
T ss_pred CCCCCHHHHHHHHHHHHhcCCcC-C---ccCCHHHHHHHHHHHHhCCCC-CCEEEEcCChHHHHHHHHHH-HHHh-----
Confidence 56777789999999886532111 1 112445677888888887542 46999999999999999984 4443
Q ss_pred CCCCEEEEeCCcchhHHHHHHHHHHhc---C-----cEEEEEeCCCCC-------CC-hHH--HHHHHHHHHhccccCCC
Q 012991 128 HRNDTVLMLHCAFQAVKKSIQAYVTRA---G-----GSVVEVQLPFPL-------AS-EEE--IINEFKKGIEKGKKDGK 189 (452)
Q Consensus 128 ~~g~~Vl~~~~~~~s~~~~~~~~a~~~---g-----~~v~~~~~~~~~-------~~-~~~--~~~~l~~~i~~~~~~~~ 189 (452)
..+.+|+.....||+.......+.... . ..+..++.+.+. ++ +.. .++.+++.++.. ..+
T Consensus 136 tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~ 213 (451)
T PRK06062 136 TGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELE--GPS 213 (451)
T ss_pred hCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhc--CCC
Confidence 345689988888888654433221100 0 011222221111 11 111 167788888531 125
Q ss_pred ceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEEEEcCcccCcCCC-
Q 012991 190 MIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLHKWFFCPP- 259 (452)
Q Consensus 190 ~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~l~g~~- 259 (452)
++++|+++......|.+.| +++|.++|++||+ ++|+|++++ +|-.. .+.....+|+++++ |.+.|+.
T Consensus 214 ~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~-lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t~g--K~lggG~~ 290 (451)
T PRK06062 214 TIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGI-VLIADEVMAGFGRTGKWFAIEHFGVVPDLITFA--KGVNSGYV 290 (451)
T ss_pred ceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCC-EEEeeccccCCCcCcHHHHHHhcCCCCCeeeec--hhhhcCCc
Confidence 7899999999988899988 8999999999999 899999986 33221 12223468988765 9887653
Q ss_pred CcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHH-HHHHHHH
Q 012991 260 SVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQA-LKMARML 338 (452)
Q Consensus 260 G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~-~~l~~~L 338 (452)
.+|.+++++++.+. +.... + ....++.+ +..+..+..++++.+.+ +.+.++.+++. .++.+.|
T Consensus 291 Pigav~~~~~i~~~-~~~~~----~----~~~~T~~g--npl~~Aaa~a~L~~l~~-----~~l~~~~~~~G~~~l~~~L 354 (451)
T PRK06062 291 PLGGVAISEAIAAT-FADRP----Y----PGGLTYSG--HPLACAAAVATINAMEE-----EGIVENAARIGAEVLGPGL 354 (451)
T ss_pred CcEEEEEcHHHHHH-hccCC----C----CCCCCCCC--CHHHHHHHHHHHHHHHh-----cCHHHHHHHHHHHHHHHHH
Confidence 47888888877664 21100 0 00111122 22233344455666553 23677777776 5788888
Q ss_pred HHHcC-CCcCCCcccccceEEEEcCCccccCC---h-----hhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCC
Q 012991 339 ANAWG-TSLGSPPEICAAMVMVGLPSRLRVMG---E-----DDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKD 409 (452)
Q Consensus 339 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~ 409 (452)
.++.. ..++......+.++.+.+........ . .....+...|.++ ||.+..
T Consensus 355 ~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gvl~~~------------------- 414 (451)
T PRK06062 355 RELAERHPSVGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKER-GLLPFV------------------- 414 (451)
T ss_pred HHHHhcCCcEEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHC-CcEEee-------------------
Confidence 76522 22222222335555555521000000 0 0234677888764 998741
Q ss_pred CCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 410 GIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 410 ~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
..+.+|+++...+|++||+.+++++++.++.
T Consensus 415 --~~~~lrl~ppl~~t~~eid~~~~~l~~~l~~ 445 (451)
T PRK06062 415 --NGNRIHVVPPCTVTEDEVREGLAILDAALAV 445 (451)
T ss_pred --cCCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 1358999998888999999999999998864
No 320
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.77 E-value=3.9e-16 Score=154.76 Aligned_cols=342 Identities=11% Similarity=0.095 Sum_probs=206.7
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|...+.+.+++.+.+.... . ..+.....+...++.++++++.+.+ .+.+.|+++||+|++.++. ++|+|....
T Consensus 53 ~lGh~~p~i~~ai~~q~~~~~-~--~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~SGseA~e~Alk-lAr~~~~~~ 127 (422)
T PRK05630 53 AHGHGHPRLKAAAHKQIDTMS-H--VMFGGLTHEPAIKLTRKLLNLTDNG-LDHVFYSDSGSVSVEVAIK-MALQYSKGQ 127 (422)
T ss_pred cCCCCCHHHHHHHHHHHHhCC-C--cccCCcCCHHHHHHHHHHHhhCCCC-cCEEEEeCCcHHHHHHHHH-HHHHHHHhc
Confidence 457777889999998886531 1 1111112344677888888887542 4699999999999999998 555553111
Q ss_pred CCC-CCEEEEeCCcchhHHHHHHHHHHhc-------C---cEEEEEeCCCCCC-Ch--HH-HHHHHHHHHhccccCCCce
Q 012991 127 FHR-NDTVLMLHCAFQAVKKSIQAYVTRA-------G---GSVVEVQLPFPLA-SE--EE-IINEFKKGIEKGKKDGKMI 191 (452)
Q Consensus 127 ~~~-g~~Vl~~~~~~~s~~~~~~~~a~~~-------g---~~v~~~~~~~~~~-~~--~~-~~~~l~~~i~~~~~~~~~~ 191 (452)
-.+ +.+|+....+|++.......+.... + ..+..++.+.... .. .. ..+.+++.+ .+++
T Consensus 128 g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~------~~~i 201 (422)
T PRK05630 128 GHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLI------DETV 201 (422)
T ss_pred CCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHH------hhce
Confidence 112 4589998888887543332111100 0 1122232211000 11 11 156667666 3578
Q ss_pred EEEEEecc-CCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEEEEcCcccCcCC-CC
Q 012991 192 RLAIIDHI-TSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLHKWFFCP-PS 260 (452)
Q Consensus 192 ~lv~~~~~-~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~l~g~-~G 260 (452)
.+|+++.. ....|...| +++|.++|++||+ ++|+|+++. +|-.. .+.....+|+++++ |.+.|+ ..
T Consensus 202 AAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~-llI~DEv~tG~GrtG~~~a~~~~gv~PDi~t~g--K~l~gG~~p 278 (422)
T PRK05630 202 AAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDI-LLIADEIATGFGRTGELFATLAAGVTPDIMCVG--KALTGGFMS 278 (422)
T ss_pred EEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCC-EEEEecceeCCCcCchhhHHHhcCCCCCeeeee--chhhcCccc
Confidence 99999974 666777654 7789999999999 899999974 33221 12223468998664 998553 23
Q ss_pred cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHH
Q 012991 261 VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLAN 340 (452)
Q Consensus 261 ~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~ 340 (452)
+|++++++++.+. +..+. .........++ ..+.....+..++++.+.+ +.+.++.+++.+++.+.|..
T Consensus 279 ~~av~~~~~i~~~-~~~~~----~~~~~~h~~T~--~g~Pla~aaa~aaL~~l~~-----~~~~~~~~~~g~~l~~~L~~ 346 (422)
T PRK05630 279 FAATLCTDKVAQL-ISTPN----GGGALMHGPTF--MANPLACAVAHASLEIIET-----GMWRKQVKRIEAELIAGLSP 346 (422)
T ss_pred cceeeccHHHHHH-HhccC----CCCccccCCCC--cCCHHHHHHHHHHHHHHHh-----CcHHHHHHHHHHHHHHHHHH
Confidence 6888888887764 21110 00000001111 1222233334445555553 24566888888888888876
Q ss_pred HcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecc
Q 012991 341 AWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISH 420 (452)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~ 420 (452)
+.....+......+.++.+.+. +..++..+.+.+.++ |+.+.. .++.+|+.+
T Consensus 347 l~~~~~v~~vRg~Gl~~~ie~~------~~~~~~~~~~~~~~~-Gl~~~~---------------------~g~~l~~~P 398 (422)
T PRK05630 347 LAHLPGVADVRVLGAIGVVEME------QPVDMEEATQAAVDH-GVWLRP---------------------FGRLVYVMP 398 (422)
T ss_pred hhcCCCeeeeeccccEEEEEEC------CcccHHHHHHHHHHC-CeEEEe---------------------cCCEEEEEC
Confidence 4322222222234667777664 122355788888764 999842 125899999
Q ss_pred cccCCHHHHHHHHHHHHHHHhc
Q 012991 421 QVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 421 ~~~~t~~di~~l~~~l~~~~~~ 442 (452)
+...|++||+.++++|++.+..
T Consensus 399 pL~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 399 PYITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred CccCCHHHHHHHHHHHHHHHhc
Confidence 9989999999999999998864
No 321
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.76 E-value=6.4e-16 Score=154.48 Aligned_cols=350 Identities=11% Similarity=0.093 Sum_probs=210.1
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhccccc-C
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTE-G 125 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~-~ 125 (452)
..|...+.+.+++.+.+..... ... .....+...++.++++++++.. .+.++|+++||+|++.++... +++.. .
T Consensus 67 ~lGh~~p~v~~Ai~~ql~~~~~-~~~--~~~~~~~~~~lAe~L~~~~p~~-~~~v~f~~sGseAve~AlKlA-~~~~~~r 141 (453)
T PRK06943 67 LFGHANPRINAALKDQLDTLEH-AML--AGCTHEPAIELAERLAALTGGT-LGHAFFASDGASAVEIALKMS-FHAWRNR 141 (453)
T ss_pred cCCCCCHHHHHHHHHHHHhcCC-ccc--cccCCHHHHHHHHHHHHhCCCC-CCEEEEeCCCHHHHHHHHHHH-HHHHHHh
Confidence 4578888899999998865311 111 1112345567888888887643 368999999999999999844 33311 0
Q ss_pred CCCCCCEEEEeCCcchhHHHHHHHHHHhc------C---cEEEEEeCCCC----CC-C-h-H--HHHHHHHHHHhccccC
Q 012991 126 RFHRNDTVLMLHCAFQAVKKSIQAYVTRA------G---GSVVEVQLPFP----LA-S-E-E--EIINEFKKGIEKGKKD 187 (452)
Q Consensus 126 ~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~------g---~~v~~~~~~~~----~~-~-~-~--~~~~~l~~~i~~~~~~ 187 (452)
....+.+|+....+|++.......+.... + ..+..++.+.. .. . + . ..++.+++.++..
T Consensus 142 g~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--- 218 (453)
T PRK06943 142 GRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAER--- 218 (453)
T ss_pred CCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhC---
Confidence 11234689998888888543322111000 0 01223332110 00 0 0 1 1157777777532
Q ss_pred CCceEEEEEec-cCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCccc----cccccCccEEEEcCcccCcC
Q 012991 188 GKMIRLAIIDH-ITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIKI----DVKEIGADFYVSNLHKWFFC 257 (452)
Q Consensus 188 ~~~~~lv~~~~-~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~~----~~~~~~~d~~~~s~~K~l~g 257 (452)
.+++.+|+++. +....|.+.+ ++++.++|++||+ ++|+|+++. +|-... +.....+|+++++ |.+.|
T Consensus 219 ~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gi-llI~DEV~TG~GRtG~~fa~~~~gv~PDivt~g--Kgl~g 295 (453)
T PRK06943 219 AGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGV-HLIADEIAVGCGRTGTFFACEQAGVWPDFLCLS--KGISG 295 (453)
T ss_pred CCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCC-EEEeechhhCCCCCcchhHHHhCCCCCCeEeee--hhhcc
Confidence 46899999998 3777788765 7789999999999 999999974 443321 2223468999996 98877
Q ss_pred CC-CcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 012991 258 PP-SVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMAR 336 (452)
Q Consensus 258 ~~-G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~ 336 (452)
+. .+|.+++++++.+. +.... .........++.| +..+..+..+.++.+.+ +.+.++..++.++|.+
T Consensus 296 G~~Pi~av~~~~ei~~~-~~~~~----~~~~~~~~~T~~g--npl~~aaa~a~L~~i~~-----~~l~~~~~~~G~~l~~ 363 (453)
T PRK06943 296 GYLPLSLVLSRDAIFAA-FYDDD----VTRGFLHSHSYTG--NPLACRAALATLDLFAE-----DDVLARNARKSARLRA 363 (453)
T ss_pred CcccceEEEEcHHHHHh-hcccC----ccCCccCCCCCCC--CHHHHHHHHHHHHHHHh-----cCHHHHHHHHHHHHHH
Confidence 63 58888898887764 11100 0000000111112 22223333344555543 3467788888899999
Q ss_pred HHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceE
Q 012991 337 MLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYA 416 (452)
Q Consensus 337 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i 416 (452)
.|.++.....+......+.++.+.+..... ....-...+...+.++ |+.+.. .++.+
T Consensus 364 ~L~~l~~~~~v~~vrG~Gl~~gvel~~~~~-~~~~~~~~i~~~~~~~-Gll~~~---------------------~g~~l 420 (453)
T PRK06943 364 ALAPLAAHPQVRHLRQRGTIFAFDVALDGD-AARTFSRRFFEAALER-ELLLRP---------------------IGTTV 420 (453)
T ss_pred HHHHHhcCCCEEeEeccccEEEEEEccCCC-cchHHHHHHHHHHHHC-CcEEEe---------------------cCCEE
Confidence 988763222222222345566666531000 0011245677777664 998842 12469
Q ss_pred EecccccCCHHHHHHHHHHHHHHHhc
Q 012991 417 RISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 417 Ris~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
|+++....|++||++++++|++.+.+
T Consensus 421 ~~~Ppl~it~~eid~~~~~l~~al~~ 446 (453)
T PRK06943 421 YLMPPYVLDDDEIAWLAERTRATLDA 446 (453)
T ss_pred EEeCCCcCCHHHHHHHHHHHHHHHHH
Confidence 99998888999999999999999864
No 322
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.76 E-value=1.8e-15 Score=150.26 Aligned_cols=344 Identities=13% Similarity=0.113 Sum_probs=209.6
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|..++.+.+++.+.+..... ... .....+...++.+++++.+..+..+.++|++|||+|++.++.. +|.+
T Consensus 53 ~lGh~~p~v~~ai~~ql~~l~~-~~~--~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~Alkl-Ar~~---- 124 (425)
T PRK07495 53 NTGHRHPRVIAAVKAQLDRFTH-TCH--QVVPYENYVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKI-ARAA---- 124 (425)
T ss_pred ccCCCCHHHHHHHHHHHhhccC-ccc--CccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHH-HHHh----
Confidence 3577888899999998875321 111 1122345666788888887532125899999999999999984 4443
Q ss_pred CCCCCEEEEeCCcchhHHHHHHHHHH-----hcC-----cEEEEEeCCCCCCCh----HHHHHHHHHHHhccccCCCceE
Q 012991 127 FHRNDTVLMLHCAFQAVKKSIQAYVT-----RAG-----GSVVEVQLPFPLASE----EEIINEFKKGIEKGKKDGKMIR 192 (452)
Q Consensus 127 ~~~g~~Vl~~~~~~~s~~~~~~~~a~-----~~g-----~~v~~~~~~~~~~~~----~~~~~~l~~~i~~~~~~~~~~~ 192 (452)
..+.+|+.....|++.......+.. +.+ ..+..++. |.+.. ....+.+++.++.. ...++++
T Consensus 125 -tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~l~~~~~~~-~~~~~ia 200 (425)
T PRK07495 125 -TGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPF--PVELHGVSVEQSLAALDKLFKAD-VDPQRVA 200 (425)
T ss_pred -hCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecC--CcccccccHHHHHHHHHHHHHhc-cCCCceE
Confidence 3456899888888886543322110 001 12333433 21111 11256667776421 0135789
Q ss_pred EEEEeccCCCCcccc-c---HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEEEEcCcccCcCCCCcEE
Q 012991 193 LAIIDHITSMPCVVI-P---VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLHKWFFCPPSVAF 263 (452)
Q Consensus 193 lv~~~~~~n~tG~~~-~---l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~l~g~~G~G~ 263 (452)
+|+++.....+|... | +++|.++|++||+ ++|+|++++ +|-.. .+.....+|++++ +|.+.++..+|+
T Consensus 201 avi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~-llI~DEv~tG~gr~G~~~a~~~~gv~pDi~tl--sK~l~~G~piga 277 (425)
T PRK07495 201 AIIIEPVQGEGGFYPAPAAFMKALRELCDQHGI-LLIADEVQTGFARTGKLFAMEHHEVAADLTTM--AKGLAGGFPLAA 277 (425)
T ss_pred EEEECCccCCCCCccCCHHHHHHHHHHHHHcCC-EEEEechhhcCCcCCCceeecccCCCCCEEee--hhhhcCCccceE
Confidence 999998877778654 3 7789999999999 899999976 32221 1222234677665 598766545789
Q ss_pred EEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcC
Q 012991 264 LYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWG 343 (452)
Q Consensus 264 l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~ 343 (452)
+++++++.+. + .+.. ...+ ...+.....+..++++++.+ +.+.++.+++.+++.+.|.++..
T Consensus 278 v~~~~~i~~~-~-~~~~---------~~~T--~~~~pl~~aaa~a~l~~l~~-----~~l~~~~~~~g~~l~~~L~~l~~ 339 (425)
T PRK07495 278 VTGRAEIMDA-P-GPGG---------LGGT--YGGNPLGIAAAHAVLDVIEE-----EDLCERANQLGNRLKQRLASLRE 339 (425)
T ss_pred EEEcHHHHhc-c-CCCC---------cCCC--CCCCHHHHHHHHHHHHHHHh-----chHHHHHHHHHHHHHHHHHHHHh
Confidence 8898887765 2 1110 0111 12222334444456666653 34677888888888888876522
Q ss_pred -CCcCCCcccccceEEEEcCCccc-cCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEeccc
Q 012991 344 -TSLGSPPEICAAMVMVGLPSRLR-VMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQ 421 (452)
Q Consensus 344 -~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~ 421 (452)
..........+.++++.+.+... ..+..-...+.+.+.+ .|+.+.... ..++.+|+.++
T Consensus 340 ~~~~i~~vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~g------------------~~~~~~r~~Pp 400 (425)
T PRK07495 340 TVPEIADIRGPGFMNAVEFNDADSGLPSAEFANRVRLKALE-KGLILLTCG------------------VHGNVIRFLAP 400 (425)
T ss_pred hCCCeeeeecCceEEEEEEecCCCCCccHHHHHHHHHHHHH-CCeEEeecC------------------CCCCEEEEeCC
Confidence 22222222336777777632100 0011123567777766 499984211 12368999999
Q ss_pred ccCCHHHHHHHHHHHHHHHhc
Q 012991 422 VYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 422 ~~~t~~di~~l~~~l~~~~~~ 442 (452)
...|++|++.++++|++.++.
T Consensus 401 l~it~~~id~~~~~l~~~l~~ 421 (425)
T PRK07495 401 ITIQDDVFAEALDILEASILE 421 (425)
T ss_pred CccCHHHHHHHHHHHHHHHHH
Confidence 989999999999999999864
No 323
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.76 E-value=6.7e-16 Score=154.15 Aligned_cols=345 Identities=14% Similarity=0.117 Sum_probs=203.6
Q ss_pred CCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCC
Q 012991 48 FGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRF 127 (452)
Q Consensus 48 ~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~ 127 (452)
.|..++.+.+++.+.+.... . ..+.....+...++.+.+++..+.+..+.++|+++|++|+..++... +.+
T Consensus 55 lGh~~~~i~~a~~~~~~~~~-~--~~~~~~~~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alkla-r~~----- 125 (425)
T PRK08088 55 TGHLHPKVVAAVEAQLKKLS-H--TCFQVLAYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIA-RAA----- 125 (425)
T ss_pred CCCCCHHHHHHHHHHHhhCC-C--ccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHH-HHH-----
Confidence 46667889999998876531 1 11111112234567777777776532258899999999999988854 433
Q ss_pred CCCCEEEEeCCcchhHHHHHHHHHHh-c----Cc-----EEEEEeCCCCCCC-h-HHHHHHHHHHHhccccCCCceEEEE
Q 012991 128 HRNDTVLMLHCAFQAVKKSIQAYVTR-A----GG-----SVVEVQLPFPLAS-E-EEIINEFKKGIEKGKKDGKMIRLAI 195 (452)
Q Consensus 128 ~~g~~Vl~~~~~~~s~~~~~~~~a~~-~----g~-----~v~~~~~~~~~~~-~-~~~~~~l~~~i~~~~~~~~~~~lv~ 195 (452)
..+.+|++.+++|++.......+... . |. .+..++.+.+..+ + ...++.|++.++... ..+++++|+
T Consensus 126 ~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~-~~~~~aavi 204 (425)
T PRK08088 126 TKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDA-APEDIAAII 204 (425)
T ss_pred hCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHhcc-CCCceEEEE
Confidence 34457787799888876554432110 0 00 0111111111111 1 112567888875211 135788999
Q ss_pred EeccCCCCccccc----HHHHHHHHHHcCCCEEEEeccccc-CCcc----ccccccCccEEEEcCcccCcCCCCcEEEEE
Q 012991 196 IDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHAM-GSIK----IDVKEIGADFYVSNLHKWFFCPPSVAFLYC 266 (452)
Q Consensus 196 ~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~~-g~~~----~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~ 266 (452)
++......|.+.+ +++|.++|++||+ ++|+|++++. +... ++.....+|+ .|++|.+.+...+|++++
T Consensus 205 ~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~-~lI~Dev~~g~g~~g~~~~~~~~~~~pdi--~s~sK~l~~G~rig~v~~ 281 (425)
T PRK08088 205 IEPVQGEGGFYAASPAFMQRLRALCDEHGI-MLIADEVQTGAGRTGTLFAMEQMGVAADL--TTFAKSIAGGFPLAGVTG 281 (425)
T ss_pred ECcccCCCCCcCCCHHHHHHHHHHHHHcCC-EEEEeccccCCCcCcchhHHhhcCCCCCE--EEEeccccCCCcceeeEe
Confidence 9888777787766 7899999999999 8999999763 2211 1122233554 566798765555899999
Q ss_pred ecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcC-CC
Q 012991 267 RKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWG-TS 345 (452)
Q Consensus 267 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~-~~ 345 (452)
++++++. +.... . . .+...+...+ .+++.++... ..+.+.++.++..+++.+.|.++.. ..
T Consensus 282 ~~~~~~~-~~~~~----~------~--~t~~~~~~~~---~a~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~l~~~~~ 343 (425)
T PRK08088 282 RAEVMDA-IAPGG----L------G--GTYAGNPIAC---AAALAVLKVF--EQENLLQKANALGEKLKDGLLAIAEKHP 343 (425)
T ss_pred cHHHHhh-cCCCC----C------C--CCCCcCHHHH---HHHHHHHHHH--HhcCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 8888775 21111 0 0 0111222233 3344444432 2345566666777777777665421 21
Q ss_pred cCCCcccccceEEEEcCCccc--cCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEeccccc
Q 012991 346 LGSPPEICAAMVMVGLPSRLR--VMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVY 423 (452)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~ 423 (452)
........+.++|+.+.+... ..+......+.+.+.++ ||.+.... ..++.+|++++..
T Consensus 344 ~~~~v~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~-Gv~~~~~~------------------~~~~~iRl~~~~~ 404 (425)
T PRK08088 344 EIGDVRGLGAMIAIELFEDGDHSKPNAKLTAQIVARARDK-GLILLSCG------------------PYYNVLRILVPLT 404 (425)
T ss_pred CeEEEeccceEEEEEEecCCCCCCCCHHHHHHHHHHHHhC-CCEEecCC------------------CCCCEEEEECCCC
Confidence 111122237778888732100 01233467788888765 98764211 1236899999988
Q ss_pred CCHHHHHHHHHHHHHHHhc
Q 012991 424 NTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 424 ~t~~di~~l~~~l~~~~~~ 442 (452)
.+.+||+..++.|+++++.
T Consensus 405 ~t~~ei~~~i~~l~~~l~~ 423 (425)
T PRK08088 405 IEDAQIRQGLEIIAQCFDE 423 (425)
T ss_pred cCHHHHHHHHHHHHHHHHh
Confidence 8999999999999999864
No 324
>PRK05965 hypothetical protein; Provisional
Probab=99.76 E-value=1e-15 Score=153.35 Aligned_cols=354 Identities=8% Similarity=0.106 Sum_probs=212.6
Q ss_pred CCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCC
Q 012991 48 FGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRF 127 (452)
Q Consensus 48 ~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~ 127 (452)
.|...+.+.+++.+.+.... .....+. ...+...++.++|++++..+ .+.++|++|||+|++.++. ++|.|....-
T Consensus 60 lGh~~p~i~~Ai~~q~~~~~-~~~~~~~-~~~~~~~~lae~L~~~~p~~-~~~v~f~~sGSEAve~AlK-lAr~~~~~~g 135 (459)
T PRK05965 60 VGYGQESIVEAAAEQMRELP-YATGYFH-FGSEPAIRLAAKLAERAPGS-LNHVYFTLGGSDAVDSAVR-FIRHYWNATG 135 (459)
T ss_pred CCCCCHHHHHHHHHHHHhcC-Ccccccc-cCCHHHHHHHHHHHhhCCCC-cCEEEEeCChhHHHHHHHH-HHHHHHHhcC
Confidence 35677889999999886531 1111111 12344567888888887542 4689999999999999998 4565532111
Q ss_pred -CCCCEEEEeCCcchhHHHHHHHHHH----h--cC---cEEEEEeCCCCC-----CCh---HH-HHHHHHHHHhccccCC
Q 012991 128 -HRNDTVLMLHCAFQAVKKSIQAYVT----R--AG---GSVVEVQLPFPL-----ASE---EE-IINEFKKGIEKGKKDG 188 (452)
Q Consensus 128 -~~g~~Vl~~~~~~~s~~~~~~~~a~----~--~g---~~v~~~~~~~~~-----~~~---~~-~~~~l~~~i~~~~~~~ 188 (452)
..+.+|+....+||+.......+.. + .+ ..+..++.+++. ++. .. .++.+++.+++.. .
T Consensus 136 ~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~--~ 213 (459)
T PRK05965 136 RPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELG--A 213 (459)
T ss_pred CCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcC--C
Confidence 1245799888888886432211110 0 11 012233322111 111 11 1567888775321 2
Q ss_pred CceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEEEEcCcccCcCCC
Q 012991 189 KMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLHKWFFCPP 259 (452)
Q Consensus 189 ~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~l~g~~ 259 (452)
+++.+|+++......|.+.| +++|.++|++||+ ++|+|+++. +|-.. .+.....+|+++++ |.+.|+.
T Consensus 214 ~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gi-llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG~ 290 (459)
T PRK05965 214 DNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGI-LFVADEVITGFGRTGPLFACEAEGVVPDLMTVA--KGLTSGY 290 (459)
T ss_pred CceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCC-EEEEechhccCccCchhhhHhhcCCCCCeEEec--hhhccCC
Confidence 57899999998888888765 6789999999999 999999975 43321 12223468999987 9887763
Q ss_pred -CcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHH
Q 012991 260 -SVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARML 338 (452)
Q Consensus 260 -G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L 338 (452)
.+|.+++++++.+. +.... ..........++.| +..+..+..++++.+.+ +.+.++.+++.+++.+.|
T Consensus 291 ~Pi~av~~~~~i~~~-~~~~~---~~~~~~~h~~T~~g--npl~~Aaa~a~L~~l~~-----~~l~~~~~~~g~~l~~~l 359 (459)
T PRK05965 291 VPMGAVLMSDHVYQG-IADGA---GAAAPVGHGYTYSA--HPVSAAVGLEVLRLYHE-----GGLLANGQKAGPRFAAGL 359 (459)
T ss_pred cceeEEEEcHHHHHH-Hhccc---cccccccccCCCCC--CHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHH
Confidence 58999998888764 11100 00000001111112 22222333334555543 456778889999999999
Q ss_pred HHHcCCCcCCCcccccceEEEEcCCccccCCh-----hhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCcc
Q 012991 339 ANAWGTSLGSPPEICAAMVMVGLPSRLRVMGE-----DDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIIT 413 (452)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (452)
.++....++......+.++.+.+.......+. .-...+.+.+.++ |+.+.. ...
T Consensus 360 ~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~-Gll~~~--------------------~g~ 418 (459)
T PRK05965 360 DALRAHPLVGDVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYAN-GLVFRA--------------------FGD 418 (459)
T ss_pred HhhccCCCEEEEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhC-CeEEEe--------------------cCC
Confidence 87633222222333456666655311000001 1245677777664 999852 113
Q ss_pred ceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 414 GYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 414 ~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
+.+|+.+..-.|++||+++++++.+.+++
T Consensus 419 ~~i~~~PpL~it~~ei~~~~~~l~~~l~~ 447 (459)
T PRK05965 419 GVLGFAPALCCTEGEFDLIFERTRKTLDD 447 (459)
T ss_pred cEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 57999999888999999999999998864
No 325
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.75 E-value=9.8e-17 Score=164.13 Aligned_cols=310 Identities=12% Similarity=0.037 Sum_probs=211.9
Q ss_pred hhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcC
Q 012991 76 NSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAG 155 (452)
Q Consensus 76 ~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g 155 (452)
...+....++++.+|+.||++ ...++++|+|.++..++.++ +++||.|++++.+|.|++.++.. .|
T Consensus 191 l~~~G~i~eAe~~AA~~fgAd--~tyfvvNGTS~~n~av~~a~--------~~~Gd~VLvdRN~HKSv~haLil----sg 256 (714)
T PRK15400 191 LDHSGPHKEAEEYIARVFNAD--RSYMVTNGTSTANKIVGMYS--------APAGSTVLIDRNCHKSLTHLMMM----SD 256 (714)
T ss_pred CCCChHHHHHHHHHHHHhCCC--cEEEEeCchHHHHHHHHHHh--------cCCCCEEEeecccHHHHHHHHHH----cC
Confidence 344567899999999999996 77888999999999999986 58999999999999999887655 59
Q ss_pred cEEEEEeCCCCCCChH--------HH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEE
Q 012991 156 GSVVEVQLPFPLASEE--------EI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFV 226 (452)
Q Consensus 156 ~~v~~~~~~~~~~~~~--------~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~iv 226 (452)
+.++++.+.. +..+ .+ .+.+++.|++.++ ..+|..++++++++ .|.++++++|+++|+.++ +++
T Consensus 257 a~PVYl~P~r--n~~Gi~g~I~~~~~~~e~i~~~i~~~p~-ak~p~~~vit~pTY-dG~~yd~~~I~~~~~~~~---ilv 329 (714)
T PRK15400 257 VTPIYFRPTR--NAYGILGGIPQSEFQHATIAKRVKETPN-ATWPVHAVITNSTY-DGLLYNTDFIKKTLDVKS---IHF 329 (714)
T ss_pred CeEEEecccc--cccCCccCCCccccCHHHHHHHHHhCcc-ccCccEEEEECCCC-ccEecCHHHHHHHhCCCC---EEE
Confidence 9999997532 2221 12 5888888876432 13455789988865 799999999999998775 479
Q ss_pred ecccccCC--cc-c-ccc--ccCc---c--EEEEcCcccCcCCCCcEEEEEecCcccc-CCCCCceeccCCCCccccccc
Q 012991 227 DAAHAMGS--IK-I-DVK--EIGA---D--FYVSNLHKWFFCPPSVAFLYCRKSILSS-DMHHPVVSHEFGNGLPIESAW 294 (452)
Q Consensus 227 D~a~~~g~--~~-~-~~~--~~~~---d--~~~~s~~K~l~g~~G~G~l~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~ 294 (452)
|+||+.=. .+ + +.. ..++ | +++.|.||.+.+....+++.++.. +.. .+... .....
T Consensus 330 DEAwgah~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~-vd~~~~n~a-----------~~m~~ 397 (714)
T PRK15400 330 DSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD-VNEETFNEA-----------YMMHT 397 (714)
T ss_pred EccchhhhccCcccCCcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCC-CCHHHHHHH-----------HHHHc
Confidence 99976311 11 1 111 1234 4 999999999888888788777554 221 01111 12233
Q ss_pred ccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcC------CCcCCCcc----------------c
Q 012991 295 IGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWG------TSLGSPPE----------------I 352 (452)
Q Consensus 295 ~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~------~~~~~~~~----------------~ 352 (452)
+.+|++..++++..+..++... .| +.+.+...+++..+++.|.++.+ +++..++. .
T Consensus 398 STSPsY~l~ASLD~a~~~m~~~-~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whg 475 (714)
T PRK15400 398 TTSPHYGIVASTETAAAMMKGN-AG-KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHG 475 (714)
T ss_pred CCCcHHHHHHHHHHHHHHHHhh-hh-HHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccC
Confidence 4788998888888888888741 14 55666778888888998887755 44433220 0
Q ss_pred c-----------cceEEEEcCCccc----cCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEE
Q 012991 353 C-----------AAMVMVGLPSRLR----VMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYAR 417 (452)
Q Consensus 353 ~-----------~~~~~~~~~~~~~----~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iR 417 (452)
. ..=+.+..|.... ...+.++..+.+.|.+ +||.+-.. ....+-
T Consensus 476 f~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e-~gI~~E~~--------------------d~~~iL 534 (714)
T PRK15400 476 FKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDE-HGIVVEKT--------------------GPYNLL 534 (714)
T ss_pred cccccccccccCCceEEEEeCCCCCCccccccCCCHHHHHHHHHH-cCCEEEec--------------------CCCeEE
Confidence 0 0001222221000 0025567788899955 69998422 234566
Q ss_pred ecccccCCHHHHHHHHHHHHHHHh
Q 012991 418 ISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 418 is~~~~~t~~di~~l~~~l~~~~~ 441 (452)
+-++..+|.+++++|+++|.++-+
T Consensus 535 fl~s~g~t~~~~~~L~~aL~~f~~ 558 (714)
T PRK15400 535 FLFSIGIDKTKALSLLRALTDFKR 558 (714)
T ss_pred EEeCCCCCHHHHHHHHHHHHHHHH
Confidence 666666799999999999998744
No 326
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.75 E-value=7.5e-16 Score=152.16 Aligned_cols=330 Identities=10% Similarity=0.070 Sum_probs=198.9
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|...+.+.+++.+.+....... .. ...+...++.++|+++.+. .+.++|++||++|++.++. ++|.|.+..
T Consensus 53 ~lGh~~p~v~~ai~~q~~~~~~~~-~~---~~~~~~~~la~~L~~~~~~--~~~v~f~~sGseA~e~Alk-lAr~~~~~~ 125 (408)
T PRK04612 53 GLGHNDPDLVAALTEQAGKLWHTS-NV---FYSAPPLKLAEELVTASRF--AEKVFLCNSGTEANEAAIK-LVRKWASSQ 125 (408)
T ss_pred cCCCCCHHHHHHHHHHHHhccccc-cc---cCCHHHHHHHHHHHhhCCC--CCEEEEcCchHHHHHHHHH-HHHHHHHhh
Confidence 456788889999998876531111 11 1233456677777777643 2689999999999999998 455542110
Q ss_pred CC--CCCEEEEeCCcchhHHHHHHHHHHhc----Cc-----EEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEE
Q 012991 127 FH--RNDTVLMLHCAFQAVKKSIQAYVTRA----GG-----SVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAI 195 (452)
Q Consensus 127 ~~--~g~~Vl~~~~~~~s~~~~~~~~a~~~----g~-----~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~ 195 (452)
-+ .+.+|+....+|++............ +. .+..+ +.. ..+.+++.++ .+++++|+
T Consensus 126 g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~----~~~----d~~~l~~~~~-----~~~~aavi 192 (408)
T PRK04612 126 GRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYV----DFN----DVEALEAAMA-----GGDVAAVM 192 (408)
T ss_pred CCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEc----CCC----CHHHHHHhhC-----CCCEEEEE
Confidence 01 13478888888888644332211000 00 01111 111 1577787774 35677777
Q ss_pred EeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc--cccc--ccCccEEEEcCcccCcCCCCcEEEEE
Q 012991 196 IDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK--IDVK--EIGADFYVSNLHKWFFCPPSVAFLYC 266 (452)
Q Consensus 196 ~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~--~~~~--~~~~d~~~~s~~K~l~g~~G~G~l~~ 266 (452)
++..+...|.+.+ +++|.++|++||+ ++|+|++++ +|... +... ...+|++++ +|.+.++..+|+++.
T Consensus 193 ~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~-llI~DEv~tg~gr~G~~~a~~~~~~~pdi~t~--~K~l~~G~piga~~~ 269 (408)
T PRK04612 193 LEPIQGEGGVMPAAPGFLARVRALCDQHDA-LLVLDEIQCGMGRTGTLFAHWQEQVTPDIVTL--AKALGGGFPIGAMLA 269 (408)
T ss_pred ECCccCCCCCcCCCHHHHHHHHHHHHHcCC-EEEEeccccCCCcCCchhhhhhcCCCCCEEEE--cchhcCCCceEEEEE
Confidence 7755444444432 7789999999999 899999986 32221 1111 123455554 598765444788888
Q ss_pred ecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcC-CC
Q 012991 267 RKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWG-TS 345 (452)
Q Consensus 267 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~-~~ 345 (452)
++++.+. + .... ...++ +.+.....+..++++.+.+ +.+.++.+++.+++.+.|.++.. ..
T Consensus 270 ~~~~~~~-~-~~~~---------~~~t~--~~~p~~~aaa~a~L~~~~~-----~~l~~~~~~~g~~l~~~l~~l~~~~~ 331 (408)
T PRK04612 270 GPKVAET-M-QFGA---------HGTTF--GGNPLAAAVARVALRKLAS-----PQIAANVARQSAALRAGLEALNAEFG 331 (408)
T ss_pred CHHHHhh-h-cCCC---------cCCCC--CCCHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 8776554 2 1110 01111 1223333444445555553 45688888999999999887632 23
Q ss_pred cCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCC
Q 012991 346 LGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNT 425 (452)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t 425 (452)
++......+.++.+.+... ....+..+.+.+.+ .|+.+.. ...+.+|+.++...|
T Consensus 332 ~i~~vrg~Gl~~~i~~~~~----~~~~a~~i~~~l~~-~Gvlv~~--------------------~g~~~lRl~Ppl~it 386 (408)
T PRK04612 332 VFAQVRGRGLMLGAVLAPA----HAGQAGAILDLAAE-HGLLLLQ--------------------AGPDVLRFVPALNLT 386 (408)
T ss_pred CeeeeeccceEEEEEecCc----hhhHHHHHHHHHHH-CCeEEee--------------------CCCCEEEEcCCccCC
Confidence 3333333455666655210 01235678888876 4999842 123689999999899
Q ss_pred HHHHHHHHHHHHHHHhc
Q 012991 426 LEDYEKFRDAVILLVEE 442 (452)
Q Consensus 426 ~~di~~l~~~l~~~~~~ 442 (452)
.+||+.+++++++.+..
T Consensus 387 ~eeid~~l~~l~~~l~~ 403 (408)
T PRK04612 387 DAELADGLARLRLALAD 403 (408)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998864
No 327
>PRK06105 aminotransferase; Provisional
Probab=99.75 E-value=1.3e-15 Score=152.73 Aligned_cols=354 Identities=10% Similarity=0.105 Sum_probs=211.4
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|..++.+.+++.+.+..... ... ......+...++.++|++++..+ .+.++|+++|++|++.++... |.+....
T Consensus 61 ~lGh~~p~i~~Ai~~q~~~~~~-~~~-~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~SGseAve~AlKla-r~~~~~~ 136 (460)
T PRK06105 61 ALGFSEQRLVEAAARQMKKLPF-YHT-FSHKSHGPVIDLAEKLVAMAPVP-MSKVFFTNSGSEANDTVVKLV-WYYNNAL 136 (460)
T ss_pred cCCCCCHHHHHHHHHHHHhCCC-eec-ccccCCHHHHHHHHHHHHhCCCC-CCEEEEeCCcHHHHHHHHHHH-HHHHHhc
Confidence 4567788899999998875310 011 11112445677888888888643 468999999999999999853 4432111
Q ss_pred C-CCCCEEEEeCCcchhHHHHHHHHHHh------cC---cEEEEEeCCCC--C----C--Ch-HHH-HHHHHHHHhcccc
Q 012991 127 F-HRNDTVLMLHCAFQAVKKSIQAYVTR------AG---GSVVEVQLPFP--L----A--SE-EEI-INEFKKGIEKGKK 186 (452)
Q Consensus 127 ~-~~g~~Vl~~~~~~~s~~~~~~~~a~~------~g---~~v~~~~~~~~--~----~--~~-~~~-~~~l~~~i~~~~~ 186 (452)
- ..+.+|+.....|++.......+... .+ ..+..++.+.. . . +. ... .+++++.+...
T Consensus 137 g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~-- 214 (460)
T PRK06105 137 GRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAE-- 214 (460)
T ss_pred CCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHc--
Confidence 1 22468888888887754332111000 01 01222222100 0 0 00 111 56778777421
Q ss_pred CCCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEeccc-ccCCcc----ccccccCccEEEEcCcccCcC
Q 012991 187 DGKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAH-AMGSIK----IDVKEIGADFYVSNLHKWFFC 257 (452)
Q Consensus 187 ~~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~-~~g~~~----~~~~~~~~d~~~~s~~K~l~g 257 (452)
...++.+|+++......|.+.+ +++|.++|++||+ ++|+|+++ ++|-.. .+.....+|+++++ |.+.|
T Consensus 215 ~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~-llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~~g--K~lgg 291 (460)
T PRK06105 215 GPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDI-LLVADEVICGFGRTGNMFGCETFGIKPDILVMS--KQLSS 291 (460)
T ss_pred CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCC-eEEEeccccCCCcCchhhhHHhcCCCCCeeeee--ccccc
Confidence 1357899999998888898877 8899999999999 89999998 465432 22233468988776 98876
Q ss_pred C-CCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 012991 258 P-PSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMAR 336 (452)
Q Consensus 258 ~-~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~ 336 (452)
+ ..+|.+++++++.+. + .+... ..+ ......+ ...+..+..+..++++.+.+ +.+.++++++.++|.+
T Consensus 292 G~~P~~av~~~~~i~~~-~-~~~~~-~~~-~~~h~~T--~~gnpl~~aaa~a~L~~i~~-----~~l~~~v~~~g~~l~~ 360 (460)
T PRK06105 292 SYQPLSAVLMNEKVYDP-I-ADESG-KIG-TFGHGFT--ASGHPVAAAVALENLAIIEE-----RDLVGNAAERGARLQA 360 (460)
T ss_pred CcccceEEEEcHHHHHH-H-hcccc-cCc-ccccCCC--CCCCHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHH
Confidence 5 236888888877654 1 11000 000 0000001 11122222333345555553 3567888999999999
Q ss_pred HHHHHcCCCcCCCcccccceEEEEcCCccccCC-----hhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCC
Q 012991 337 MLANAWGTSLGSPPEICAAMVMVGLPSRLRVMG-----EDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGI 411 (452)
Q Consensus 337 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~ 411 (452)
.|.++....++......+.+..+.+........ ..-+..+...+.+ .|+.+..
T Consensus 361 ~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~-~Gvl~~~--------------------- 418 (460)
T PRK06105 361 RLRALADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAHE-HGVISRA--------------------- 418 (460)
T ss_pred HHHHhhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHHH-CCeEEEe---------------------
Confidence 998763333333333445565665521100000 1113567777766 4999842
Q ss_pred ccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 412 ITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 412 ~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
.++.+|+++....|++||+.+++++.+.+++
T Consensus 419 ~g~~i~l~Ppl~it~~eid~~~~~l~~~l~~ 449 (460)
T PRK06105 419 MGDTLAFCPPLIITAAQVDEMVDRFGRALDD 449 (460)
T ss_pred cCCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 1258999999888999999999999998864
No 328
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.75 E-value=3.1e-17 Score=153.72 Aligned_cols=333 Identities=13% Similarity=0.167 Sum_probs=215.9
Q ss_pred CCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCC
Q 012991 49 GSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFH 128 (452)
Q Consensus 49 ~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~ 128 (452)
++..+.+.++++.+....++ +.-..+..+.-.++++.+|+++|.+ +.++|..|- ..+...+.++ +.
T Consensus 154 g~ca~~~~~~~~kygl~~cs---s~~e~G~~~~hkelE~l~A~f~g~e--~a~vF~mGf-~TNs~~~p~l--------~~ 219 (519)
T KOG1357|consen 154 GPCAEASLKSFDKYGLSRCS---SRHEAGTTEEHKELEELVARFLGVE--DAIVFSMGF-ATNSMNIPSL--------LG 219 (519)
T ss_pred CcCChHHHHHHHHhcccccc---cchhcccHHHHHHHHHHHHHhcCCc--ceEEEeccc-cccccCccee--------ec
Confidence 35556678888776433221 1112334556788999999999996 888888772 2333444443 68
Q ss_pred CCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCc---eEEEEEeccCCCCcc
Q 012991 129 RNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKM---IRLAIIDHITSMPCV 205 (452)
Q Consensus 129 ~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~---~~lv~~~~~~n~tG~ 205 (452)
++.-|+.+...|.|..... +..|+.++.+ ..++-..+-..|+++|...+--+++ .-+|++....++-|.
T Consensus 220 ~gsLIiSDelNHaSi~~Ga----RLSgAtiRVf----kHNdm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~ 291 (519)
T KOG1357|consen 220 KGSLIISDELNHASLITGA----RLSGATTRVF----RHNDMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGT 291 (519)
T ss_pred CCcceeeccccchheeccc----cccCceEEEE----ecCCHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCe
Confidence 9999999999999976664 5579999988 5565444445555555533211222 236788888889999
Q ss_pred cccHHHHHHHHHHcCCCEEEEecccccCCccc---------cccccCccEEEEcCcccCcCCCCcEEEEEecCccccCCC
Q 012991 206 VIPVRKLVKICRDEGVDQVFVDAAHAMGSIKI---------DVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMH 276 (452)
Q Consensus 206 ~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~---------~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~ 276 (452)
+.+++++++++|+|.+ +++.|+||+.|+++. ..+.-++|++.+++.|+ +|..| |++..++++++. +.
T Consensus 292 iv~Lp~vvalkkkyka-yl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKS-fga~G-Gyiagsk~lid~-lr 367 (519)
T KOG1357|consen 292 IVDLPEVVALKKKYKA-YLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKS-FGAAG-GYIAGSKELIDY-LR 367 (519)
T ss_pred ecccHHHHHhhccccE-EEEeeccccccccCCCCcceeeccCCCchhheeecceehhh-ccccc-ceecCcHHHHhh-hc
Confidence 9999999999999999 999999999887632 23333689999999996 66665 888889888886 33
Q ss_pred CCceeccCCCCcccccccccccCccccc-cHHHHHHHHHH--hhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccc
Q 012991 277 HPVVSHEFGNGLPIESAWIGTRDYSAQL-VIPSAVTFVSR--FEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEIC 353 (452)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~al~~~~~--~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 353 (452)
.+.....+ +++..+.++ ....+++.+.- ...+-++..+++.+++++++..|.+. ++.+++...
T Consensus 368 t~s~~~~y-----------at~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~-gfivyG~~d-- 433 (519)
T KOG1357|consen 368 TPSPSALY-----------ATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM-GFIVYGNND-- 433 (519)
T ss_pred cCCCceee-----------cccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcC-cEEEecCCC--
Confidence 22211111 222222211 12223444331 00123455667889999999999876 777766654
Q ss_pred cceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHH
Q 012991 354 AAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFR 433 (452)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~ 433 (452)
++++-+-+- .......+.+.|.++ +|.+.....+.. .......|+|.+..+|.|++++++
T Consensus 434 SpVvplll~------~~~k~~~f~r~~l~~-nigvVvvgfPat-------------pl~e~r~R~c~Sa~ht~e~ld~~l 493 (519)
T KOG1357|consen 434 SPVVPLLLY------GPAKIVAFSREMLER-NIGVVVVGFPAT-------------PLLESRARFCLSASHTKEDLDRAL 493 (519)
T ss_pred CCcceeeec------CcccccHHHHHHHhc-CceEEEEeCCCc-------------hHHHhHHHhhhcccccHHHHHHHH
Confidence 333322221 011223566566554 777755555432 134567899999999999999999
Q ss_pred HHHHHHHh
Q 012991 434 DAVILLVE 441 (452)
Q Consensus 434 ~~l~~~~~ 441 (452)
+.+.+.-+
T Consensus 494 ~~i~~~g~ 501 (519)
T KOG1357|consen 494 EVIDRVGD 501 (519)
T ss_pred HHHhhhch
Confidence 99987753
No 329
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.75 E-value=3.7e-15 Score=148.21 Aligned_cols=345 Identities=12% Similarity=0.113 Sum_probs=204.4
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|...+.+.+++.+.+.... ... +.....+...++.+++++++.....+.++|+++||+|++.++.. +|.+
T Consensus 53 ~lGh~~p~v~~ai~~ql~~~~-~~~--~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~Alkl-Ar~~---- 124 (421)
T PRK06777 53 NTGHRHPKVVAAVRQQLDQFT-HTA--YQIVPYASYVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKI-ARAY---- 124 (421)
T ss_pred ccCCCCHHHHHHHHHHHhhcc-ccc--ccccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHHHHHHH-HHHh----
Confidence 346777889999999887531 111 11112334566777788887542246899999999999999984 4443
Q ss_pred CCCCCEEEEeCCcchhHHHHHHHHHHh-cCc---------EEEEEeCCCCCC--ChHHHHHHHHHHHhccccCCCceEEE
Q 012991 127 FHRNDTVLMLHCAFQAVKKSIQAYVTR-AGG---------SVVEVQLPFPLA--SEEEIINEFKKGIEKGKKDGKMIRLA 194 (452)
Q Consensus 127 ~~~g~~Vl~~~~~~~s~~~~~~~~a~~-~g~---------~v~~~~~~~~~~--~~~~~~~~l~~~i~~~~~~~~~~~lv 194 (452)
..+.+|+.....|++.......+... ... .+..++.+.... .....++.+++.+++.. ..+++++|
T Consensus 125 -tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~-~~~~iaav 202 (421)
T PRK06777 125 -TGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADI-APDQVAAI 202 (421)
T ss_pred -hCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhcc-CCCceEEE
Confidence 34567888888888865444322110 000 011221110000 01112566777775210 13578999
Q ss_pred EEeccCCCCccc-cc---HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEEEEcCcccCcCCCCcEEEE
Q 012991 195 IIDHITSMPCVV-IP---VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLHKWFFCPPSVAFLY 265 (452)
Q Consensus 195 ~~~~~~n~tG~~-~~---l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~l~g~~G~G~l~ 265 (452)
+++......|.. .| +++|.++|++||+ ++|+|++++ +|... .......+|+++ ++|.+.++..+|+++
T Consensus 203 i~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~-llI~DEv~tg~gr~g~~~~~~~~~~~pDiv~--~sK~l~~G~pigav~ 279 (421)
T PRK06777 203 LLEPIQGEGGFNVAPPEFMSALRTLCDEHGI-LLIADEVQTGFARTGKLFAMEYYDVKPDLIT--MAKSLGGGMPISAVV 279 (421)
T ss_pred EECCccCCCCCccCCHHHHHHHHHHHHHcCC-EEEEechhhCCccCCchhhhhhcCCCCCEEe--eehhhcCCCceEEEE
Confidence 999998888864 45 7899999999999 899999986 22211 111123478775 569876544489999
Q ss_pred EecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcC-C
Q 012991 266 CRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWG-T 344 (452)
Q Consensus 266 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~-~ 344 (452)
.++++.+. + .+.. ...+ ...+.....+..++++.+.+ +.+.++.+++.+++.+.|.++.. .
T Consensus 280 ~~~~i~~~-~-~~~~---------~~~T--~~~~p~~~aaa~a~L~~~~~-----~~l~~~~~~~g~~l~~~L~~l~~~~ 341 (421)
T PRK06777 280 GRAEVMDA-P-APGG---------LGGT--YAGNPLAVAAALAVLDVIAE-----EKLCQRALILGAHLVEVLEKAKASC 341 (421)
T ss_pred EcHHHHhc-c-CCCC---------CCCC--CCcCHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHHHHHHHhC
Confidence 98887765 2 1110 0011 11233334444455555442 46788888999999999987621 1
Q ss_pred CcCCCcccccceEEEEcCCc-cccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEeccccc
Q 012991 345 SLGSPPEICAAMVMVGLPSR-LRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVY 423 (452)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~ 423 (452)
.++......+.++.+.+... ....+..-...+...+.+ .||.+.++.. .++++|+++...
T Consensus 342 ~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~-~Gv~i~~~~~------------------~g~~lr~~ppl~ 402 (421)
T PRK06777 342 PAIVDIRARGSMVAVEFNDPQTGKPSPEFTRQYQRQALE-EGLLLLSCGV------------------HGNVIRFLYPLT 402 (421)
T ss_pred CCeEEecCceEEEEEEEecCccCCccHHHHHHHHHHHHh-CCeEEeecCC------------------CCCEEEEeCCCC
Confidence 11111122244555444210 000001113445555655 4999854321 136899999877
Q ss_pred CCHHHHHHHHHHHHHHHh
Q 012991 424 NTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 424 ~t~~di~~l~~~l~~~~~ 441 (452)
.+++++++++++|++.+.
T Consensus 403 i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 403 IPDAQFSKALNILTRLLA 420 (421)
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 899999999999998763
No 330
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.75 E-value=1.1e-15 Score=148.21 Aligned_cols=326 Identities=15% Similarity=0.182 Sum_probs=198.9
Q ss_pred hHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEE
Q 012991 79 RKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSV 158 (452)
Q Consensus 79 ~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v 158 (452)
+..+.++++.+++++|.+ .+++|++||.|++++.. + .+++||+| +.+.|.....+. ....|..+
T Consensus 70 ~~s~~~lE~~va~~~G~~---~av~v~sGT~Al~ll~~-l-------~l~pGDeV--psn~~f~Tt~ah---Ie~~Gav~ 133 (450)
T TIGR02618 70 SRNFYHLERTVRELYGFK---YVVPTHQGRGAENLLSQ-I-------AIKPGDYV--PGNMYFTTTRYH---QEKNGATF 133 (450)
T ss_pred CCcHHHHHHHHHHHHCCC---eEEEcCCHHHHHHHHHH-h-------CCCCcCEE--CCceeHHHHHHH---HHhCCeEE
Confidence 444788999999999995 79999999999887653 3 36899977 667775544442 14457655
Q ss_pred EEEeCCC----C--CCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCC-ccccc---HHHHHHHHHHcCCCEEEEe
Q 012991 159 VEVQLPF----P--LASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMP-CVVIP---VRKLVKICRDEGVDQVFVD 227 (452)
Q Consensus 159 ~~~~~~~----~--~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~t-G~~~~---l~~i~~l~~~~~~~~~ivD 227 (452)
.-++.+. . ....+.+ ++++++.|+.. ...++++|.+..++|.. |..+| +++|.++|++||+ ++|.|
T Consensus 134 vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~--~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl-~vi~D 210 (450)
T TIGR02618 134 VDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEV--GADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGI-KVFYD 210 (450)
T ss_pred EeeecccccccccCCCCCCCcCHHHHHHHhccc--cCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCC-EEEEE
Confidence 5553220 0 0123555 99999999631 11245677777777765 78855 6889999999999 79999
Q ss_pred cccccCCcc-----------cccc------ccCccEEEEcCcccCcCCCCcEEEEEec-CccccCCCCCceeccCCCCcc
Q 012991 228 AAHAMGSIK-----------IDVK------EIGADFYVSNLHKWFFCPPSVAFLYCRK-SILSSDMHHPVVSHEFGNGLP 289 (452)
Q Consensus 228 ~a~~~g~~~-----------~~~~------~~~~d~~~~s~~K~l~g~~G~G~l~~~~-~~~~~~l~~~~~~~~~~~~~~ 289 (452)
+|+.++.-. .++. ...+|.+++|++|..+++.| |+++.++ +++++ . ...... + .+++
T Consensus 211 aAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~G-G~l~~~d~~l~~k-~-r~~~~~-~-eG~~ 285 (450)
T TIGR02618 211 ATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIG-GFLCMNDDEMFQS-A-KELVVV-F-EGMP 285 (450)
T ss_pred ccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCc-eEEEeCCHHHHHH-H-HHHhhh-c-CCcc
Confidence 999875311 1120 11589999999998777887 7887654 44443 1 111000 1 1100
Q ss_pred cccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccc--c
Q 012991 290 IESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLR--V 367 (452)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 367 (452)
..|......+.++..+++.... ....++....+++|.+.|.+. |+.+..|.+ ++.+++....-+- .
T Consensus 286 ----tyGgla~r~~~ala~gL~e~~~-----~~y~~~r~~~a~~La~~L~~~-Gvpv~~p~g--gh~V~vda~~~lph~~ 353 (450)
T TIGR02618 286 ----SYGGLAGRDMEAMAIGIREAVD-----YEYIEHRVKQVRYLGDKLKAA-GVPIVEPVG--GHAVFLDARRFLPHIP 353 (450)
T ss_pred ----ccCchhhhhHHHHHHHHHHhhh-----HHHHHHHHHHHHHHHHHHHHC-CCcccCCCC--cceEEEEhHHhCCCCC
Confidence 0122222233333334443332 234445566789999999988 998877765 5677765421000 0
Q ss_pred CChhhHHHHHHHHhhhcceEe-eecccCCCCCCCCCCCCCCCCCCccceEEeccccc-CCHHHHHHHHHHHHHHHhccc
Q 012991 368 MGEDDALRLRGHLRVRFGVEV-PIHYQAPKDDGQPQAGARDKDGIITGYARISHQVY-NTLEDYEKFRDAVILLVEEGQ 444 (452)
Q Consensus 368 ~~~~~~~~l~~~L~~~~gI~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~-~t~~di~~l~~~l~~~~~~~~ 444 (452)
....-+..++-+|..+.||.. ..+....+.+. .-... ....-..+|+.++-- -|..+++.+.+++..+.++..
T Consensus 354 ~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~--~~~~~--~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~ 428 (450)
T TIGR02618 354 QDQFPAQSLAASIYVETGVRSMERGIVSAGRNN--VTGEH--HRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHRD 428 (450)
T ss_pred hhhChHHHHHHHHHHHhCccEEeecceecccCC--CCCcc--cCCccceeeeccccccccHhHHHHHHHHHHHHHhhHh
Confidence 124567788888887778874 22222111000 00000 011235799998622 378999999999999987643
No 331
>PRK06149 hypothetical protein; Provisional
Probab=99.75 E-value=1.3e-15 Score=165.63 Aligned_cols=345 Identities=13% Similarity=0.108 Sum_probs=213.1
Q ss_pred CCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCC
Q 012991 48 FGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRF 127 (452)
Q Consensus 48 ~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~ 127 (452)
.|...+.|.+++.+.+...... +. + ..+...++.+++++++..+ .+.++|++|||+|+..++. ++|++
T Consensus 597 lGh~hp~v~~Ai~~q~~~l~~~-~~-~---~~~~~~elae~L~~~~p~~-~~~v~f~~SGsEA~e~Alk-lAr~~----- 664 (972)
T PRK06149 597 LGHGHPRLAAAAARQWSLLNTN-SR-F---HYAAVAEFSERLAALAPDG-LDTVFLVNSGSEANDLAIR-LAWAA----- 664 (972)
T ss_pred cCCCCHHHHHHHHHHHHhcccc-cc-c---cCHHHHHHHHHHHHhCCCC-cCEEEEeCCchHHHHHHHH-HHHHh-----
Confidence 5667777999998887654221 11 1 2345677888899988532 3689999999999999998 44443
Q ss_pred CCCCEEEEeCCcchhHHHHHHHHHHh----cCc------EEEEEeCCC----CC--CC-hHHHHHHHHHHHhccccCCCc
Q 012991 128 HRNDTVLMLHCAFQAVKKSIQAYVTR----AGG------SVVEVQLPF----PL--AS-EEEIINEFKKGIEKGKKDGKM 190 (452)
Q Consensus 128 ~~g~~Vl~~~~~~~s~~~~~~~~a~~----~g~------~v~~~~~~~----~~--~~-~~~~~~~l~~~i~~~~~~~~~ 190 (452)
..+.+|++.+..|++.......+... .+. .+..++.+. +. ++ .....+++++.++.......+
T Consensus 665 tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 744 (972)
T PRK06149 665 SGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRG 744 (972)
T ss_pred cCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCc
Confidence 34567888888888654332111100 000 122222211 01 11 111234445444322222467
Q ss_pred eEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEeccc-ccCCccc-----cccccCccEEEEcCcccCcCCCC
Q 012991 191 IRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAH-AMGSIKI-----DVKEIGADFYVSNLHKWFFCPPS 260 (452)
Q Consensus 191 ~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~-~~g~~~~-----~~~~~~~d~~~~s~~K~l~g~~G 260 (452)
+.+|+++......|.+.+ +++|.++|++||+ ++|+|+++ ++|-... +.....+|+++++ |.++++..
T Consensus 745 iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~-llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~g--K~lg~G~P 821 (972)
T PRK06149 745 LAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGG-VCIADEVQVGYGRLGHYFWGFEQQGVVPDIITMA--KGMGNGHP 821 (972)
T ss_pred eEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCC-EEEEEeehhcCCccCccchhhhhcCCCCCEEEec--ccccCCee
Confidence 899999999888899888 8999999999999 89999998 5654431 1123458998765 98877666
Q ss_pred cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHH
Q 012991 261 VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLAN 340 (452)
Q Consensus 261 ~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~ 340 (452)
+|++++++++.+. + ... . .+ ..++.| +..+..+..++++.+.+ +.+.++.+++.++|++.|.+
T Consensus 822 l~av~~~~~i~~~-~-~~~-~-~~------~sT~~g--nP~~~aaala~L~~i~~-----e~l~~~~~~~G~~l~~~L~~ 884 (972)
T PRK06149 822 LGAVITRREIAEA-L-EAE-G-YF------FSSTGG--SPVSCRIGMAVLDVLRE-----EKLQENARRVGDHLKARLEA 884 (972)
T ss_pred eEEEEEcHHHHhh-h-ccC-C-cc------cCCCCC--CHHHHHHHHHHHHHHHh-----cCHHHHHHHHHHHHHHHHHH
Confidence 8999999888765 2 110 0 00 001111 22222333344555543 35677888888999999887
Q ss_pred HcC-CCcCCCcccccceEEEEcCC-cc-ccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEE
Q 012991 341 AWG-TSLGSPPEICAAMVMVGLPS-RL-RVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYAR 417 (452)
Q Consensus 341 ~~~-~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iR 417 (452)
+.. ..++......+.++.+.+.. .. ...+......+.+.|.++ ||.+... +...+.+|
T Consensus 885 l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~-Gvl~~~~------------------g~~~~vl~ 945 (972)
T PRK06149 885 LADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLEL-GVIMQPT------------------GDHLNILK 945 (972)
T ss_pred HHHhCCCeEEEeecceEEEEEEecCcccCCCChHHHHHHHHHHHhC-CeEEeec------------------CCCCCEEE
Confidence 632 23333333446666666521 00 001112245788888775 9998532 12246899
Q ss_pred ecccccCCHHHHHHHHHHHHHHHhcc
Q 012991 418 ISHQVYNTLEDYEKFRDAVILLVEEG 443 (452)
Q Consensus 418 is~~~~~t~~di~~l~~~l~~~~~~~ 443 (452)
+.+....|++||+.++++|.+++.++
T Consensus 946 ~~Ppl~it~~~id~~~~~l~~~l~~~ 971 (972)
T PRK06149 946 IKPPLCLDRESADFFVDMLDRVLTEG 971 (972)
T ss_pred EECCCcCCHHHHHHHHHHHHHHHHhh
Confidence 99998889999999999999998653
No 332
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.74 E-value=3.4e-15 Score=149.50 Aligned_cols=338 Identities=13% Similarity=0.124 Sum_probs=206.5
Q ss_pred CCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCC
Q 012991 48 FGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRF 127 (452)
Q Consensus 48 ~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~ 127 (452)
.|...+.|.+++.+.+....... . ....+...++.++|+++++.. .+.++|++||++|++.++. ++|++
T Consensus 85 lGh~~p~v~~Ai~~ql~~~~~~~-~---~~~~~~~~~lae~L~~~~p~~-~~~v~f~~sGseAve~Alk-lAr~~----- 153 (459)
T PRK06082 85 LGYGHPHVIEKVKEQMAKLPFSP-R---RFTNETAIECAEKLTEIAGGE-LNRVLFAPGGTSAIGMALK-LARHI----- 153 (459)
T ss_pred cCCCCHHHHHHHHHHHHhCCCcc-C---ccCCHHHHHHHHHHHHhCCCC-CCEEEECCCcHHHHHHHHH-HHHHh-----
Confidence 46677789999998887542111 1 122456778888999988642 4689999999999999988 44443
Q ss_pred CCCCEEEEeCCcchhHHHHHHHHHHhc------C---cEEEEEeCCC----CCCCh---HH-HHHHHHHHHhccccCCCc
Q 012991 128 HRNDTVLMLHCAFQAVKKSIQAYVTRA------G---GSVVEVQLPF----PLASE---EE-IINEFKKGIEKGKKDGKM 190 (452)
Q Consensus 128 ~~g~~Vl~~~~~~~s~~~~~~~~a~~~------g---~~v~~~~~~~----~~~~~---~~-~~~~l~~~i~~~~~~~~~ 190 (452)
..+.+|+.....|++.......+.... + ..+..++.+. +..+. .. .++.+++.+++ ..+
T Consensus 154 tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~----~~~ 229 (459)
T PRK06082 154 TGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEK----EGG 229 (459)
T ss_pred cCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhc----CCC
Confidence 345788888887777543222111000 0 0122232110 11111 11 15678887753 247
Q ss_pred eEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEEEEcCcccCcCCC-Cc
Q 012991 191 IRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLHKWFFCPP-SV 261 (452)
Q Consensus 191 ~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~l~g~~-G~ 261 (452)
+++|+++...+..+.+.| +++|.++|++||+ ++|+|++++ +|-.. .+.....+|++++ .|.+.|+. .+
T Consensus 230 vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~-llI~DEV~tG~GRtG~~fa~e~~gv~PDiv~~--gKgl~gG~~P~ 306 (459)
T PRK06082 230 IGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNV-LLIIDEIPNGMGRTGEWFTHQAYGIEPDILCI--GKGLGGGLVPI 306 (459)
T ss_pred EEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCC-EEEEechhhCCCccchhhHhHhhCCCCCEEEe--cccccCCCCcc
Confidence 889999988776333445 7899999999999 899999976 33221 1222345899985 59887653 47
Q ss_pred EEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHH
Q 012991 262 AFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANA 341 (452)
Q Consensus 262 G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 341 (452)
|.+++++++... .... + ...++ ..+..+..+..+.++.+.+ +.+.++.+++.++|.+.|.++
T Consensus 307 ~av~~~~~i~~~--~~~~----~-----~~~T~--~gnpl~~aaa~a~L~~l~~-----~~l~~~~~~~g~~l~~~L~~l 368 (459)
T PRK06082 307 AAMITKDKYNTA--AQIS----L-----GHYTH--EKSPLGCAAALATIEVIEQ-----EGLLEKVKADSQFMRERLLEM 368 (459)
T ss_pred eEEEEcHHHHhh--ccCC----C-----CCCCC--CcCHHHHHHHHHHHHHHHh-----cCHHHHHHHHHHHHHHHHHHH
Confidence 888888776542 1100 0 00111 1222233334445555553 346788899999999999875
Q ss_pred cC-CCcCCCcccccceEEEEcCCcc--ccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEe
Q 012991 342 WG-TSLGSPPEICAAMVMVGLPSRL--RVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARI 418 (452)
Q Consensus 342 ~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRi 418 (452)
.. ..++......+.++.+.+.... ......-...+...+.+ .|+.+... ..+.+|+
T Consensus 369 ~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~--------------------~~~~i~~ 427 (459)
T PRK06082 369 KAKYPLIGDVRGIGLLWGVELVTDRHTKERAYDEAEAVLYRCLN-NGLSFKVS--------------------QGNVIQL 427 (459)
T ss_pred HhhCCCeeeeeeccceeEEEEccCccccCccHHHHHHHHHHHHh-CCCEEEec--------------------CCCEEEE
Confidence 32 3333333344666666663110 00001113456677766 49987421 1368999
Q ss_pred cccccCCHHHHHHHHHHHHHHHhc
Q 012991 419 SHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 419 s~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
++....|++||+++++++++.+..
T Consensus 428 ~Ppl~it~~eid~~~~~l~~~l~~ 451 (459)
T PRK06082 428 SPPLIITREELTQALAILEEAIAK 451 (459)
T ss_pred eCCCccCHHHHHHHHHHHHHHHHH
Confidence 999888999999999999998864
No 333
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.74 E-value=2.2e-15 Score=149.93 Aligned_cols=352 Identities=12% Similarity=0.092 Sum_probs=209.8
Q ss_pred CCCeEEeccC----CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHH
Q 012991 37 QHGVARINNG----SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAA 112 (452)
Q Consensus 37 ~~~~~~l~~~----~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~ 112 (452)
++.++.+..+ ..|..++.+.+++.+.+........ .....+...++.+.++++++.+ .+.+.|+++||+|++
T Consensus 44 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~---~~~~~~~~~~la~~l~~~~~~~-~~~v~f~~sGseA~e 119 (427)
T TIGR00508 44 GRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMF---GGFTHKPAIELCQKLVKMTPNA-LDCVFLADSGSVAVE 119 (427)
T ss_pred CCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccc---cccCCHHHHHHHHHHHhhCCCC-CCEEEEeCCcHHHHH
Confidence 4455544332 4567778899999988765321111 1112344567888888887543 479999999999999
Q ss_pred HHHHHhhcccccCCCCC-CCEEEEeCCcchhHHHHHHHHHHhc-------C-c--EEEEEeCCCCCCC-----hHHHHHH
Q 012991 113 IVLQQIGRGFTEGRFHR-NDTVLMLHCAFQAVKKSIQAYVTRA-------G-G--SVVEVQLPFPLAS-----EEEIINE 176 (452)
Q Consensus 113 ~~~~~l~~~~~~~~~~~-g~~Vl~~~~~~~s~~~~~~~~a~~~-------g-~--~v~~~~~~~~~~~-----~~~~~~~ 176 (452)
.++.. ++.++...-.+ ..+|+.....|++.......+.... + . .+..++. |... .....++
T Consensus 120 ~Alkl-Ar~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~~~~~~~ 196 (427)
T TIGR00508 120 VALKM-ALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPA--PQNRFDEEWNEEAITP 196 (427)
T ss_pred HHHHH-HHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCC--CCccccchhHHHHHHH
Confidence 99984 34332100112 3689999998888654332211100 0 0 0111111 1110 1112567
Q ss_pred HHHHHhccccCCCceEEEEEecc-CCCCcccc----cHHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccE
Q 012991 177 FKKGIEKGKKDGKMIRLAIIDHI-TSMPCVVI----PVRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADF 246 (452)
Q Consensus 177 l~~~i~~~~~~~~~~~lv~~~~~-~n~tG~~~----~l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~ 246 (452)
+++.+++. .+++++|+++.. +...|... .+++|.++|++||+ ++|+|++|. +|... .+.....+|+
T Consensus 197 l~~~l~~~---~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~-llI~DEv~tG~Gr~G~~~~~~~~~v~pDi 272 (427)
T TIGR00508 197 LAKLMELH---SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDI-LLIADEIATGFGRTGKLFACEHAGVVPDI 272 (427)
T ss_pred HHHHHHhc---CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCC-EEEEeccccCCCcCCccchhhhcCCCCCE
Confidence 77777543 357889999975 55555543 47899999999999 899999983 33221 1222346888
Q ss_pred EEEcCcccCcCCC-CcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHH
Q 012991 247 YVSNLHKWFFCPP-SVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQ 325 (452)
Q Consensus 247 ~~~s~~K~l~g~~-G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~ 325 (452)
+++ +|.+.|+. .++.++.++++.+. +.... .+ ......++. .+.....+..++++.+.+ +.+.+
T Consensus 273 ~~~--gK~l~gG~~p~~a~~~~~~~~~~-~~~~~----~~-~~~~~~T~~--g~p~~~aaa~a~l~~l~~-----~~~~~ 337 (427)
T TIGR00508 273 LCV--GKALTGGYMTLSATVTTDKVAQT-ISSGE----AG-CFMHGPTFM--GNPLACAVAEASLAILLE-----GEWQK 337 (427)
T ss_pred EEe--chhhhcCcccceEEEEcHHHHHH-HhcCC----CC-ccccCCCCC--cCHHHHHHHHHHHHHHHh-----CCHHH
Confidence 875 69876542 35777777777654 21100 00 000001111 122333444455666553 23578
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCC
Q 012991 326 RNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGA 405 (452)
Q Consensus 326 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~ 405 (452)
+.+++.++|.+.|.++............+.++.+.+. +..+...+.+.|.++ ||.+...
T Consensus 338 ~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~------~~~~~~~~~~~l~~~-Gv~~~~~-------------- 396 (427)
T TIGR00508 338 QVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMY------KPVNVEELQKKFVEQ-GVWIRPF-------------- 396 (427)
T ss_pred HHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEEC------CccCHHHHHHHHHHC-CeEEEec--------------
Confidence 8899999999999876322212222223666666663 123456788888775 9998421
Q ss_pred CCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 406 RDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 406 ~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
...+|++++..+|++||+++++++++.+.+
T Consensus 397 -------~~~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 397 -------GKLIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred -------CCEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 247999999888999999999999999865
No 334
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.74 E-value=7.1e-15 Score=147.03 Aligned_cols=346 Identities=14% Similarity=0.092 Sum_probs=205.9
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCC-CCcE-EEecChhHHHHHHHHHhhccccc
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADD-VGEI-SLVDNATTAAAIVLQQIGRGFTE 124 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~-~~~i-~~t~g~t~a~~~~~~~l~~~~~~ 124 (452)
..|..++.+.+++.+.+..... ........+...++.++|++++.... ...+ ++++|||+|++.++. ++|.|
T Consensus 52 ~lGh~~p~i~~ai~~q~~~~~~---~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~Alk-lAr~~-- 125 (442)
T TIGR00709 52 ALGHNHPNMKQKILDYLQSGLP---LHTLDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIK-LAKTY-- 125 (442)
T ss_pred cCCCCCHHHHHHHHHHHHhccC---ccccccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHH-HHHHh--
Confidence 3467788899999988765210 10111224556677888888875321 1344 456899999999998 55544
Q ss_pred CCCCCCCEEEEeCCcchhHHHHHHHHHH----hcC-----cEEEEEeCCCCC----C---C-hHH-HHHHHHHHHhcccc
Q 012991 125 GRFHRNDTVLMLHCAFQAVKKSIQAYVT----RAG-----GSVVEVQLPFPL----A---S-EEE-IINEFKKGIEKGKK 186 (452)
Q Consensus 125 ~~~~~g~~Vl~~~~~~~s~~~~~~~~a~----~~g-----~~v~~~~~~~~~----~---~-~~~-~~~~l~~~i~~~~~ 186 (452)
..+.+|+....+|++.......+.. +.+ ..+..++.+... + + +.. ..+.+++.++....
T Consensus 126 ---tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (442)
T TIGR00709 126 ---TGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVES 202 (442)
T ss_pred ---cCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhcc
Confidence 3456899988888886655433211 011 112333321100 0 0 001 12334444432111
Q ss_pred CCCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEEEEcCcccCcC
Q 012991 187 DGKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLHKWFFC 257 (452)
Q Consensus 187 ~~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~l~g 257 (452)
...++++|+++.+.+..|.+.+ +++|.++|++||+ ++|.|+++. +|-.. .+.....+|++++ +|.+.+
T Consensus 203 ~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~-llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~--gK~l~~ 279 (442)
T TIGR00709 203 GVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDI-KLILDEVQAGFGRSGTMFAFEHAGIEPDFVVM--SKAVGG 279 (442)
T ss_pred CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCC-EEEEeccccCCCCCCchhHHHHcCCCCcEEEE--cccccC
Confidence 1356888999888888887753 7789999999999 899999976 43221 1122345899986 598776
Q ss_pred CCCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Q 012991 258 PPSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARM 337 (452)
Q Consensus 258 ~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~ 337 (452)
+..+|.++++++ ... + .+.. . .. +...+..+..+..++++.+.+ +.+.++.+++.+++.+.
T Consensus 280 G~Pigav~~~~~-~~~-~-~~~~---~------~~--T~~gnpla~aaa~a~L~~i~~-----~~l~~~~~~~g~~l~~~ 340 (442)
T TIGR00709 280 GLPLAVLLIAPE-FDA-W-QPAG---H------TG--TFRGNQLAMVTGTEALNYWKD-----DNLAQNAQERGERITSF 340 (442)
T ss_pred CcccEEEEEchH-Hhc-c-CCCc---C------CC--CCCcCHHHHHHHHHHHHHHHh-----cCHHHHHHHHHHHHHHH
Confidence 555888888877 443 1 1110 0 01 112223333444445555543 34677888889999998
Q ss_pred HHHHc-CCCcCCCcccccceEEEEcCCccccC--------ChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCC
Q 012991 338 LANAW-GTSLGSPPEICAAMVMVGLPSRLRVM--------GEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDK 408 (452)
Q Consensus 338 L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~ 408 (452)
|.++. ...++......+.++.+.+.+..... +..-...+...+.+ .|+.+....
T Consensus 341 L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~~---------------- 403 (442)
T TIGR00709 341 LDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFE-NGLLLETGG---------------- 403 (442)
T ss_pred HHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHH-CCeEEeecC----------------
Confidence 88753 23333333344666666663210000 00123567777766 499884211
Q ss_pred CCCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 409 DGIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 409 ~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
..++.+|+.++...|++||+.+++++.+.+.+
T Consensus 404 --~~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~ 435 (442)
T TIGR00709 404 --REGEVFRLLCPITIDQEECEEGISRFKQAVEE 435 (442)
T ss_pred --CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 12468999999999999999999999999864
No 335
>PRK07481 hypothetical protein; Provisional
Probab=99.74 E-value=3.8e-15 Score=149.03 Aligned_cols=355 Identities=12% Similarity=0.111 Sum_probs=209.7
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|...+.+.+++.+.+...... .. +.....+...++.++|+++++.++.+.+.|++|||+|++.++. ++|.|++..
T Consensus 55 ~lGh~~p~v~~Ai~~ql~~~~~~-~~-~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~Alk-lAr~~~~~~ 131 (449)
T PRK07481 55 NVGHNREEVKEAIVRQLDELEYY-ST-FDGTTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALK-LARQYWKVR 131 (449)
T ss_pred cCCCCCHHHHHHHHHHHHhccce-ec-ccccCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHH-HHHHHHHhc
Confidence 45677788999999887653111 01 0011234567788888888743224689999999999999998 455553111
Q ss_pred CCC-CCEEEEeCCcchhHHHHHHHHHHhc------C---cEEEEEeCCC----CCC--ChH---HH-HHHHHHHHhcccc
Q 012991 127 FHR-NDTVLMLHCAFQAVKKSIQAYVTRA------G---GSVVEVQLPF----PLA--SEE---EI-INEFKKGIEKGKK 186 (452)
Q Consensus 127 ~~~-g~~Vl~~~~~~~s~~~~~~~~a~~~------g---~~v~~~~~~~----~~~--~~~---~~-~~~l~~~i~~~~~ 186 (452)
-++ +.+|+....+|++.......+.... + ..+..++.+. +.+ +.. .. .+.+++.+...
T Consensus 132 g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~-- 209 (449)
T PRK07481 132 GQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQ-- 209 (449)
T ss_pred CCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhc--
Confidence 112 4678888888888543222111000 0 1122232211 111 111 12 45667766421
Q ss_pred CCCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEEEEcCcccCcC
Q 012991 187 DGKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLHKWFFC 257 (452)
Q Consensus 187 ~~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~l~g 257 (452)
..+++.+|+++......|.+.| ++++.++|++||+ ++|.|+++. +|-.. .+.....+|+++++ |.+.|
T Consensus 210 ~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~-llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g--Kgl~g 286 (449)
T PRK07481 210 GPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGI-LLIADEVVTGFGRTGSWFGSRGWGVKPDIMCLA--KGITS 286 (449)
T ss_pred CCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCC-EEEEeehhhCcCcCchhhHhhhcCCCCCEEEEe--ecccC
Confidence 1367999999999888888765 7899999999999 999999975 43321 22233468999886 98876
Q ss_pred CC-CcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 012991 258 PP-SVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMAR 336 (452)
Q Consensus 258 ~~-G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~ 336 (452)
+. .+|.+++++++.+. + .+.. ......... +|-. ..-+++.+++..++.+ ..+.+.++.+++.+++.+
T Consensus 287 G~~Pi~av~~~~~i~~~-~-~~~~--~~~~~~~h~----~T~~-gnpl~~aaa~a~L~~l--~~~~l~~~~~~~g~~l~~ 355 (449)
T PRK07481 287 GYVPLGATMVNARIADA-F-EANA--DFGGAIMHG----YTYS-GHPVACAAALATLDIV--VREDLPANAAKRGAYLLE 355 (449)
T ss_pred CCcCceEEEEcHHHHHH-H-hccC--ccccccccC----CCCC-CCHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHH
Confidence 53 47888888877664 1 1110 000000001 1111 1222233344444333 234577888889999999
Q ss_pred HHHHHcC-CCcCCCcccccceEEEEcCCccccCC-----hhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCC
Q 012991 337 MLANAWG-TSLGSPPEICAAMVMVGLPSRLRVMG-----EDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDG 410 (452)
Q Consensus 337 ~L~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~ 410 (452)
.|.++.. ..++......+.++.+.+.......+ ..-...+.+.+.++ |+.+...
T Consensus 356 ~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~------------------- 415 (449)
T PRK07481 356 GLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVAREN-GVLVRPS------------------- 415 (449)
T ss_pred HHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHHhC-CeEEEec-------------------
Confidence 9887632 33333333345566666531100000 11235677777664 9988421
Q ss_pred CccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 411 IITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 411 ~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
++.+|+++....|++||+.+++++.+.++.
T Consensus 416 --g~~i~l~Ppl~it~~eid~~~~~l~~~l~~ 445 (449)
T PRK07481 416 --GTKIILSPPLVIQREDVDRIVDALDAGLSA 445 (449)
T ss_pred --CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 236899998888999999999999999864
No 336
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.74 E-value=3e-15 Score=145.64 Aligned_cols=326 Identities=14% Similarity=0.129 Sum_probs=194.1
Q ss_pred hHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHH-HHHHHHhcCcE
Q 012991 79 RKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKS-IQAYVTRAGGS 157 (452)
Q Consensus 79 ~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~-~~~~a~~~g~~ 157 (452)
+..+.++++.+++++|.+ .++.|++||.|++++.. + .+++||+| +...|.....+ + ...|..
T Consensus 77 d~s~~~LE~~vAe~lG~e---~aV~v~sGTaAl~ll~~-l-------~v~pGd~V--p~n~~f~Tt~ahI----~~~Ga~ 139 (460)
T PRK13237 77 SRNFYHLEETVQEYYGFK---HVVPTHQGRGAENLLSR-I-------AIKPGQYV--PGNMYFTTTRYHQ----ELNGGI 139 (460)
T ss_pred CCcHHHHHHHHHHHHCCC---eEEEeCCHHHHHHHHHH-h-------CCCCcCEE--CCccchHhhHHHH----HhCCcE
Confidence 334788999999999995 79999999999998644 3 36889965 55555544333 3 335664
Q ss_pred EEEEeCC------CCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCC-cccc---cHHHHHHHHHHcCCCEEEE
Q 012991 158 VVEVQLP------FPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMP-CVVI---PVRKLVKICRDEGVDQVFV 226 (452)
Q Consensus 158 v~~~~~~------~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~t-G~~~---~l~~i~~l~~~~~~~~~iv 226 (452)
+.-+..+ ......+.+ ++++++.|+... ..++.+|.+..+.|.. |... ++++|.++|++||+ .+|.
T Consensus 140 fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~--~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl-~Vi~ 216 (460)
T PRK13237 140 FVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVG--AENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGI-KVFF 216 (460)
T ss_pred EEeeecccccccccCCCCCCCcCHHHHHHHhcccc--CCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCC-EEEE
Confidence 4433211 001123556 999999996321 2355666666667776 6665 57899999999999 7999
Q ss_pred ecccccCCcc-----------cccc------ccCccEEEEcCcccCcCCCCcEEEEEecCccccCCCCCceeccCCCCcc
Q 012991 227 DAAHAMGSIK-----------IDVK------EIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMHHPVVSHEFGNGLP 289 (452)
Q Consensus 227 D~a~~~g~~~-----------~~~~------~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~ 289 (452)
|+|+.++... .++. ....|.+++|++|.+.++.| |+++.+++.+...+ ..+...+.|...
T Consensus 217 DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~G-G~i~t~D~eL~~~~-r~~~~~~eG~~t- 293 (460)
T PRK13237 217 DATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIG-GFLAMNDEELFDEA-KELVVVYEGMPS- 293 (460)
T ss_pred ECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCc-eEEEECCHHHHHHH-HHhccccCCCcC-
Confidence 9999887321 1111 11479999999998877776 88888765443301 111000011100
Q ss_pred cccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCcc--cc
Q 012991 290 IESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRL--RV 367 (452)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 367 (452)
.|..+..-+.++..++.... ...+.++.....++|.+.|.+. |+.++.|.+ ++-+++....-. -.
T Consensus 294 -----ygg~~grd~~alAvgl~E~~-----~~~y~~~ri~~~~~l~~~L~~~-Gvpv~~p~g--gH~v~vda~~~lph~~ 360 (460)
T PRK13237 294 -----YGGMAGRDMEAMAIGIEESV-----QYEYIEHRVGQVRYLGEKLLAA-GVPIVEPVG--GHAVFLDARRFLPHLP 360 (460)
T ss_pred -----CCChhhhHHHHHHhHHHhhc-----hHHHHHHHHHHHHHHHHHHHHC-CCceecCCC--ceEEEEEhHHhCCCCC
Confidence 01111112223333333222 1245555667889999999887 898888765 444544321100 00
Q ss_pred CChhhHHHHHHHHhhhcceEee-ecccCCCCCCCCCCCCCCCCCCccceEEecccc-cCCHHHHHHHHHHHHHHHhccc
Q 012991 368 MGEDDALRLRGHLRVRFGVEVP-IHYQAPKDDGQPQAGARDKDGIITGYARISHQV-YNTLEDYEKFRDAVILLVEEGQ 444 (452)
Q Consensus 368 ~~~~~~~~l~~~L~~~~gI~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~t~~di~~l~~~l~~~~~~~~ 444 (452)
....-+..++-+|..+.||... .+....+.+. .-... ....-..+|+.+.- .-|.+++|.+.++|..+.++..
T Consensus 361 ~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~--~~~~~--~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~ 435 (460)
T PRK13237 361 QDQFPAQALAAELYIESGVRSMERGIVSAGRDP--KTGEN--HYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKHRE 435 (460)
T ss_pred cccChHHHHHHHHHHHhCcCeEeecceecccCC--CCCcc--CCCccceeeeccccccccHHHHHHHHHHHHHHHHhHh
Confidence 1245677888888877788742 1211111000 00000 01113579999862 2378999999999999987643
No 337
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.74 E-value=5.7e-17 Score=141.51 Aligned_cols=290 Identities=14% Similarity=0.104 Sum_probs=192.0
Q ss_pred HHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCC-CEEEEeCCcchhHHHHHHHHHHhcCcEEEEE
Q 012991 83 LESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRN-DTVLMLHCAFQAVKKSIQAYVTRAGGSVVEV 161 (452)
Q Consensus 83 ~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g-~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~ 161 (452)
.+++.++++--+.. ++++.++.|+.+.+.+++++. +.|| ++|++..|+|...... |...+++++.+
T Consensus 72 k~ls~a~~~dkpLt-~dnic~GvGsDE~ID~iiR~~--------c~PGkeKIl~cPPtysMY~v~----A~iNd~eVvkv 138 (375)
T KOG0633|consen 72 KRLSDALAQDKPLT-SDNICVGVGSDELIDLIIRCV--------CDPGKEKILDCPPTYSMYVVD----AAINDAEVVKV 138 (375)
T ss_pred chhhhhcccCCCCC-ccceEEecCcHHHHHHHHhhe--------ecCCccceeecCCcceeEEEE----eecCCceEEEe
Confidence 44555555555554 789999999999999999976 5777 7999999988653222 34568899998
Q ss_pred eCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHc-CCCEEEEeccccc--C--Cc
Q 012991 162 QLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDE-GVDQVFVDAAHAM--G--SI 235 (452)
Q Consensus 162 ~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~-~~~~~ivD~a~~~--g--~~ 235 (452)
+ .+.+..+ ++.+.+.++. ...++++++++|.||||..+..+.|.++.+-- |. ++++|+|+-- | ..
T Consensus 139 p----l~pdF~lnvdai~evl~~----ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~ng-lVVvDEAYidFsg~~S~ 209 (375)
T KOG0633|consen 139 P----LNPDFSLNVDAIAEVLEL----DSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNG-LVVVDEAYIDFSGVESR 209 (375)
T ss_pred c----CCCCccccHHHHHHHHhc----cccceEEEEcCCCCCCcccccHHHHHHHHhCCCCc-EEEEeeeeEeecccccc
Confidence 4 4556666 8999998875 46899999999999999999999999988754 67 7999998631 2 11
Q ss_pred cccccccCccEEEEcCcccCcCCCC--cEEEEEecCcccc--CCCCCceeccCCCCcccccccccccCccccccHHHHHH
Q 012991 236 KIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSS--DMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVT 311 (452)
Q Consensus 236 ~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 311 (452)
-.-+.+..--++..+++|. +|..| +|+.+...++.+. .+..|+ ..+. .+-.+|++
T Consensus 210 ~~lV~kYpNLivlqTlSKs-fGLAGiRvG~~~~~~~ia~iln~~KaPY-----------------NiS~---~~s~~AL~ 268 (375)
T KOG0633|consen 210 MKLVKKYPNLIVLQTLSKS-FGLAGIRVGYGAFPLSIAEILNRAKAPY-----------------NISV---AGSVAALA 268 (375)
T ss_pred chHhHhCCceeehhhhhhh-cCcceeEeecccccHHHHHHHHhccCCc-----------------cccc---hhHHHHHH
Confidence 1112222223455689997 88888 5666666655553 112222 1111 11122333
Q ss_pred HHHHh-hcCHHHHHHHHHHHHHHHHHHHHHHcCCC-cCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEee
Q 012991 312 FVSRF-EGGIDGIMQRNHEQALKMARMLANAWGTS-LGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVP 389 (452)
Q Consensus 312 ~~~~~-~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~ 389 (452)
.+..- ....+..+..+.+.+.+|.+.|.++++.. ++++.. ++|+.+.+.+. ..+. ++.++..+..++|+.|+
T Consensus 269 Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~d--aNFiLi~v~~~---~n~~-akkly~q~at~~gVvVR 342 (375)
T KOG0633|consen 269 ALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSD--ANFILIEVTGG---DNGM-AKKLYKQDATKMGVVVR 342 (375)
T ss_pred hcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCccc--ccEEEEEEcCC---CcHH-HHHHHHHHHHhcceEEE
Confidence 22210 11356667777788888999999887654 333333 77888887521 1122 34455555566899997
Q ss_pred ecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHH
Q 012991 390 IHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILL 439 (452)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~ 439 (452)
..... ..-.|++|++.+ |+|+-..+++.++..
T Consensus 343 frgse---------------~~c~G~lRitvG---t~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 343 FRGSE---------------EGCKGYLRITVG---TPEENTVLMKCLKQF 374 (375)
T ss_pred EcCCc---------------cccceeEEEEcC---CcccchHHHHHHHhh
Confidence 42221 123589999999 888888898888765
No 338
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.74 E-value=1.2e-15 Score=142.72 Aligned_cols=329 Identities=13% Similarity=0.094 Sum_probs=207.2
Q ss_pred hhhhhhHHHHHHHHHHHhHhC----CC-CCC-cEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHH
Q 012991 74 YFNSLRKGILESRAAVKDLIN----AD-DVG-EISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSI 147 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~----~~-~~~-~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~ 147 (452)
..|+...++-++...+.+..+ .+ ..+ .+.+|+|.|.+++.++..+ +++||.|++...+|.+.....
T Consensus 94 lQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~--------~N~gd~vlie~~ty~~AL~s~ 165 (472)
T KOG0634|consen 94 LQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTL--------INRGDHVLIEEYTYPSALQSM 165 (472)
T ss_pred hccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHh--------hcCCCceEEecccchHHHHhc
Confidence 446667777788888888665 22 122 7899999999999999987 699999999999999876665
Q ss_pred HHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccC---CCceEEE-EEeccCCCCcccccHH---HHHHHHHHcC
Q 012991 148 QAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKD---GKMIRLA-IIDHITSMPCVVIPVR---KLVKICRDEG 220 (452)
Q Consensus 148 ~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~---~~~~~lv-~~~~~~n~tG~~~~l~---~i~~l~~~~~ 220 (452)
+ ..|++++.+ +.++++.+++.|++.+..-.-. .+++.++ .++..+||||..++++ +|.+||++|+
T Consensus 166 ~----a~gv~~ipv----~md~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyD 237 (472)
T KOG0634|consen 166 E----ALGVKIIPV----KMDQDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYD 237 (472)
T ss_pred c----ccCceEEec----cccCCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcC
Confidence 4 458777777 4466666689999988743221 2446554 6788899999999865 7999999999
Q ss_pred CCEEEEecccccCCcc--------------------------ccccccCccEEEEcCcccCcCC-CCcEEEEEecCcccc
Q 012991 221 VDQVFVDAAHAMGSIK--------------------------IDVKEIGADFYVSNLHKWFFCP-PSVAFLYCRKSILSS 273 (452)
Q Consensus 221 ~~~~ivD~a~~~g~~~--------------------------~~~~~~~~d~~~~s~~K~l~g~-~G~G~l~~~~~~~~~ 273 (452)
+ +++.|+.+.+..+. ++++-.|-.+-.-||+| +.+| .-+|++.+++-++++
T Consensus 238 f-LIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSK-iiaPGlRlG~it~~~~~l~r 315 (472)
T KOG0634|consen 238 F-LIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSK-IIAPGLRLGWITGNSLFLKR 315 (472)
T ss_pred E-EEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhh-hhcCcceeEEeecCHHHHHH
Confidence 9 99999887643221 11111122234458999 4554 338998888877765
Q ss_pred CCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcC----HHHHHHHHHHHHHHHHHHHHHH-cC--CCc
Q 012991 274 DMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGG----IDGIMQRNHEQALKMARMLANA-WG--TSL 346 (452)
Q Consensus 274 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g----~~~~~~~~~~~~~~l~~~L~~~-~~--~~~ 346 (452)
+ ... .+. .+..|+...+..+.+-+..+.+. | +..++..+..++..+..+|.+- |. .++
T Consensus 316 -i-l~~------ae~-----~t~~pSg~sq~iv~a~l~~wgqe--G~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~ 380 (472)
T KOG0634|consen 316 -I-LDL------AEV-----ATSGPSGFSQGIVYAMLKRWGQE--GFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEY 380 (472)
T ss_pred -H-hhh------cce-----eecCcccccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEE
Confidence 1 111 000 01123433433333334333321 3 3344555556666666666553 22 234
Q ss_pred CCCcccccceEEEEcCCccc-cCChhh-HHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccC
Q 012991 347 GSPPEICAAMVMVGLPSRLR-VMGEDD-ALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYN 424 (452)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~ 424 (452)
..|.+ +.|+|+.++-... .+...+ ..++...+..++||.+.++..+...- .. ...+-++|++++++
T Consensus 381 ~~P~a--GmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p----~~-----s~~kiffRls~a~a- 448 (472)
T KOG0634|consen 381 HPPKA--GMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDP----ES-----SWSKIFFRLSIAFA- 448 (472)
T ss_pred ecCCc--ceEEEEEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcC----cc-----CCCcceEEEEeecC-
Confidence 44444 8899999961111 111233 44555544556799997776653210 00 11224999999875
Q ss_pred CHHHHHHHHHHHHHHHhcccccc
Q 012991 425 TLEDYEKFRDAVILLVEEGQVCQ 447 (452)
Q Consensus 425 t~~di~~l~~~l~~~~~~~~~~~ 447 (452)
..++++..++++...+++...++
T Consensus 449 ~~e~l~~g~~rf~~~ike~f~~~ 471 (472)
T KOG0634|consen 449 EPEKLDEGIERFGSVIKEHFITN 471 (472)
T ss_pred CHHHHHHHHHHHHHHHHHHhhcc
Confidence 56688888888888887766554
No 339
>PRK12403 putative aminotransferase; Provisional
Probab=99.73 E-value=4.6e-15 Score=148.79 Aligned_cols=352 Identities=13% Similarity=0.137 Sum_probs=202.7
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|...+.|.+++.+.+..... .+.. .....+...++.++++++++.. .+.++|+++||+|+..++... |.|+...
T Consensus 67 ~lGh~hp~v~~A~~~q~~~~~~-~~~~-~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~SGseA~e~AiklA-r~~~~~~ 142 (460)
T PRK12403 67 NLGYGRKDLAAAAARQMEQLPY-YNMF-FHTTHPAVIELSELLFSLLPGH-YSHAIYTNSGSEANEVLIRTV-RRYWQVL 142 (460)
T ss_pred cCCCCCHHHHHHHHHHHHhCCC-eecc-cccCCHHHHHHHHHHHHhCCCC-cCEEEEeCCcHHHHHHHHHHH-HHHHHhh
Confidence 3567777799999998876421 1111 1123455778889999988742 468999999999999999854 4332100
Q ss_pred CCCCC-EEEEeCCcchhHHHHHHHHHHhc-----C---cEEEEEeCCCCC----C----ChHHH-HHHHHHHHhccccCC
Q 012991 127 FHRND-TVLMLHCAFQAVKKSIQAYVTRA-----G---GSVVEVQLPFPL----A----SEEEI-INEFKKGIEKGKKDG 188 (452)
Q Consensus 127 ~~~g~-~Vl~~~~~~~s~~~~~~~~a~~~-----g---~~v~~~~~~~~~----~----~~~~~-~~~l~~~i~~~~~~~ 188 (452)
-++++ .|+....+||+.......+.... + ..+..++.+... + ..... .+.+++.+.+. ..
T Consensus 143 g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~--~~ 220 (460)
T PRK12403 143 GKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILEL--GA 220 (460)
T ss_pred CCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHh--CC
Confidence 12333 44455556665432221111000 0 012233221100 0 01111 45666665421 13
Q ss_pred CceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEEEEcCcccCcCCC
Q 012991 189 KMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLHKWFFCPP 259 (452)
Q Consensus 189 ~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~l~g~~ 259 (452)
+++++|+++......|.+.| +++|.++|++||+ ++|+|++++ +|-.. .+.....+|++++ .|.+.|+.
T Consensus 221 ~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~-lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~--gK~lggG~ 297 (460)
T PRK12403 221 ENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDV-LLCADEVIGGFGRTGEWFAHEHFGFEPDTLSI--AKGLTSGY 297 (460)
T ss_pred CceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCC-EEEEeccccCCCcCchhhhhhhcCCCCCeEEE--cccccccc
Confidence 57889999999888899887 8999999999999 899999985 43322 1222335899985 59887663
Q ss_pred -CcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHH-HHHHHHHHH
Q 012991 260 -SVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNH-EQALKMARM 337 (452)
Q Consensus 260 -G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~-~~~~~l~~~ 337 (452)
.+|.+++++++.+. +. +. +.......++ ..+.....+..++++.+.+ +.+.++.+ ++.+++.+.
T Consensus 298 ~Piga~v~~~~i~~~-~~-~~-----~~~~~~~~T~--~gnPl~~Aaala~L~~i~~-----~~l~~~~~~~~g~~l~~~ 363 (460)
T PRK12403 298 VPMGGLVLSKRIAEA-LV-EQ-----GGVFAHGLTY--SGHPVAAAVAIANLKALRD-----EGVVTRVKDDTGPYLQRC 363 (460)
T ss_pred cceEEEEECHHHHHH-Hh-cC-----CCccccCCCC--CCCHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHH
Confidence 47777788776654 11 10 0000000111 1222233334445555553 23567775 788888888
Q ss_pred HHHHc-CCCcCCCcccccceEEEEcCCc--cccC-Ch--hhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCC
Q 012991 338 LANAW-GTSLGSPPEICAAMVMVGLPSR--LRVM-GE--DDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGI 411 (452)
Q Consensus 338 L~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~--~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~ 411 (452)
|.++. ...++......+.++.+.+... .... .. .-...+...+.++ |+.+...
T Consensus 364 L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~-------------------- 422 (460)
T PRK12403 364 LREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEE-GVIIRST-------------------- 422 (460)
T ss_pred HHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHHhC-CEEEEec--------------------
Confidence 87642 2233333333456666655311 0000 00 0123344555564 9998521
Q ss_pred ccceEEecccccCCHHHHHHHHHHHHHHHhcc
Q 012991 412 ITGYARISHQVYNTLEDYEKFRDAVILLVEEG 443 (452)
Q Consensus 412 ~~~~iRis~~~~~t~~di~~l~~~l~~~~~~~ 443 (452)
.+.+|+++....|++|++.+++++++++++-
T Consensus 423 -~~~~~l~Ppl~it~~eid~~~~~l~~al~~~ 453 (460)
T PRK12403 423 -LGRMIMAPALVAGRAEIDELVDKTRIAVDRT 453 (460)
T ss_pred -CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 1468999998889999999999999999764
No 340
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.73 E-value=4.7e-15 Score=148.92 Aligned_cols=346 Identities=12% Similarity=0.147 Sum_probs=201.9
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|...+.+.+++.+.+......... ....+...++.++|+++++....+.+.|++|||+|++.++. ++|.+
T Consensus 67 ~lGh~~p~v~~ai~~q~~~~~~~~~~---~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~Alk-lAr~~---- 138 (451)
T PRK06918 67 NVGHSHPKVKEALHKQVDQYIHTGFN---VMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVK-IARKY---- 138 (451)
T ss_pred CCCCCCHHHHHHHHHHHHhccCcccc---ccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHH-HHHHH----
Confidence 34677788999999988653111111 11234567788888888864312589999999999999998 45544
Q ss_pred CCCCCEEEEeCCcchhHHHHHHHHHHh-c------C---cEEEEEeCCC----CCC--C-h-HH-HHHHHHHHHhccccC
Q 012991 127 FHRNDTVLMLHCAFQAVKKSIQAYVTR-A------G---GSVVEVQLPF----PLA--S-E-EE-IINEFKKGIEKGKKD 187 (452)
Q Consensus 127 ~~~g~~Vl~~~~~~~s~~~~~~~~a~~-~------g---~~v~~~~~~~----~~~--~-~-~~-~~~~l~~~i~~~~~~ 187 (452)
..+.+|+....+||+.......+... . + ..+..++.+. +.. . . .. ..+.++..+... ..
T Consensus 139 -tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 216 (451)
T PRK06918 139 -TKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISE-VA 216 (451)
T ss_pred -hCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhh-cC
Confidence 34567888888888865444322110 0 0 1122232211 000 0 0 11 134455544210 01
Q ss_pred CCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCc--ccccccc--CccEEEEcCcccCcCC
Q 012991 188 GKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSI--KIDVKEI--GADFYVSNLHKWFFCP 258 (452)
Q Consensus 188 ~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~--~~~~~~~--~~d~~~~s~~K~l~g~ 258 (452)
.+++.+|+++......|.+.| +++|.++|++||+ ++|.|+++. ++.. .+....+ .+|++ +++|.+.++
T Consensus 217 ~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gi-llI~DEV~tg~gr~g~~~a~~~~~v~pDi~--t~sK~l~~G 293 (451)
T PRK06918 217 PETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGI-LFVADEIQTGFARTGKYFAIEHFDVVPDLI--TVSKSLGAG 293 (451)
T ss_pred CCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCC-EEEEeccccCcCccCceehhHhcCCCCCEE--eeehhhcCC
Confidence 357899999988777787654 6789999999999 799999975 3222 1222222 37866 566987655
Q ss_pred CCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHH
Q 012991 259 PSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARML 338 (452)
Q Consensus 259 ~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L 338 (452)
.-+|++++++++.+. + .+.. . .. +...+.....+..++++.+.+ +.+.++.+++.+++.+.|
T Consensus 294 ~pig~v~~~~~i~~~-~-~~~~---~------~~--T~~g~~l~~aaa~a~l~~i~~-----~~~~~~~~~~g~~l~~~l 355 (451)
T PRK06918 294 VPISGVIGRKEIMDE-S-APGE---L------GG--TYAGSPLGCAAALAVLDIIEK-----ENLNDRAIELGKVVMNRF 355 (451)
T ss_pred CccEEEEEcHHHHhc-c-CCCC---c------Cc--CCCcCHHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHHHHH
Confidence 558999998887765 2 1110 0 00 112222333444445666653 234566677777888877
Q ss_pred HHHc-CCCcCCCcccccceEEEEcC-Cc-cccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccce
Q 012991 339 ANAW-GTSLGSPPEICAAMVMVGLP-SR-LRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGY 415 (452)
Q Consensus 339 ~~~~-~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (452)
.++. ...........+.++.+.+. +. ....+......+.+.+.+ .||.+..+.. .+++
T Consensus 356 ~~l~~~~~~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~Gvlv~~~~~------------------~~~~ 416 (451)
T PRK06918 356 EEMKNKYNCIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEANK-RGLLLLSAGT------------------YGNV 416 (451)
T ss_pred HHHHhhCCCceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHHHH-CCeEEeecCC------------------CCCE
Confidence 7652 22221111122444443331 10 000112235567777766 4999854311 1368
Q ss_pred EEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 416 ARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 416 iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
+|++++...|+++|+.++++|++.++.
T Consensus 417 lrl~p~l~~t~~~id~~l~~l~~~l~~ 443 (451)
T PRK06918 417 IRVLMPLVITDEQLEEGLTIIEESLQA 443 (451)
T ss_pred EEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 999998767899999999999998864
No 341
>PRK07036 hypothetical protein; Provisional
Probab=99.73 E-value=3.9e-15 Score=149.36 Aligned_cols=354 Identities=16% Similarity=0.144 Sum_probs=210.4
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|...+.+.+++.+.+.... .... +.....+...++.+++++++..+ .+.+.|++|||+|++.++. ++|.+....
T Consensus 64 ~lGh~~p~v~~Ai~~q~~~~~-~~~~-~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~sGseAve~Alk-lAr~~~~~~ 139 (466)
T PRK07036 64 NVGYGREEMADAIADQARRLP-YYTP-FGDMTNAPAAELAAKLAELAPGD-LNHVFLTTGGSTAVDSALR-FVHYYFNVR 139 (466)
T ss_pred cCCCCCHHHHHHHHHHHHhCc-cccc-ccccCCHHHHHHHHHHHHhCCCC-cCEEEEeCCchHHHHHHHH-HHHHHHHhc
Confidence 346777889999998876531 1111 11012445677888888887542 4689999999999999998 455542111
Q ss_pred C-CCCCEEEEeCCcchhHHHHHHHHHHhcC---------cEEEEEeCCCCC----C----ChHH-HHHHHHHHHhccccC
Q 012991 127 F-HRNDTVLMLHCAFQAVKKSIQAYVTRAG---------GSVVEVQLPFPL----A----SEEE-IINEFKKGIEKGKKD 187 (452)
Q Consensus 127 ~-~~g~~Vl~~~~~~~s~~~~~~~~a~~~g---------~~v~~~~~~~~~----~----~~~~-~~~~l~~~i~~~~~~ 187 (452)
- ....+|+....+|++.......+....+ ..+..++.+... . .... ..+.+++.+... .
T Consensus 140 g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~ 217 (466)
T PRK07036 140 GRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSL--G 217 (466)
T ss_pred CCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHc--C
Confidence 1 1236888888888885433221111000 113333322110 0 0111 145666666421 1
Q ss_pred CCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc--cc---ccccCccEEEEcCcccCcC
Q 012991 188 GKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK--ID---VKEIGADFYVSNLHKWFFC 257 (452)
Q Consensus 188 ~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~--~~---~~~~~~d~~~~s~~K~l~g 257 (452)
.+++++|+++......|.+.| +++|.++|++||+ ++|+|+++. +|-.. +. .....+|+++++ |.+.|
T Consensus 218 ~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~-llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt~g--K~l~g 294 (466)
T PRK07036 218 ADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDI-LYISDEVVTGFGRLGHFFASEAVFGIQPDIITFA--KGLTS 294 (466)
T ss_pred CCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCC-EEEEeechhCCCcCchhhhhhhhcCCCCCEEEEc--ccccc
Confidence 467999999999888898877 8899999999999 899999984 54432 11 223468998886 98876
Q ss_pred CC-CcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 012991 258 PP-SVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMAR 336 (452)
Q Consensus 258 ~~-G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~ 336 (452)
+. .+|.+++++++.+. +..... .+.......++.+ +..+..+..+.++.+.+ +.+.++.+++.++|.+
T Consensus 295 G~~Pi~av~~~~~i~~~-~~~~~~---~~~~~~~~~T~~g--npl~~aaa~a~Le~i~~-----~~l~~~~~~~g~~l~~ 363 (466)
T PRK07036 295 GYQPLGAVIISERLLDV-ISGPNA---KGNVFTHGFTYSG--HPVACAAALKNIEIMER-----EGLCEHVREVGPYFEE 363 (466)
T ss_pred CccccEEEEEcHHHHHH-HhcccC---cCcccccCCCCCC--CHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHH
Confidence 52 47888888887764 211100 0000000111112 22223333344555442 3567888899999999
Q ss_pred HHHHHcCCCcCCCcccccceEEEEcCCccccC-----ChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCC
Q 012991 337 MLANAWGTSLGSPPEICAAMVMVGLPSRLRVM-----GEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGI 411 (452)
Q Consensus 337 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~ 411 (452)
.|.++....++......+.++.+.+.+..... +..-...+.+.+.++ ||.+..
T Consensus 364 ~L~~l~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~--------------------- 421 (466)
T PRK07036 364 RLASLRELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQER-GLLVRP--------------------- 421 (466)
T ss_pred HHHHhccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHHC-CcEEee---------------------
Confidence 99765332222223344666666653110000 011235677777664 998842
Q ss_pred ccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 412 ITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 412 ~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
..+.+|+++....|++||+.+++++.+.++.
T Consensus 422 ~~~~~~l~Ppl~it~~~id~~~~~l~~al~~ 452 (466)
T PRK07036 422 LEHLCVLSPPLIITRAQIDEIVAILRAAIEE 452 (466)
T ss_pred cCCEEEEeCCCcCCHHHHHHHHHHHHHHHHH
Confidence 1247899998888999999999999988865
No 342
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.73 E-value=2.5e-15 Score=143.19 Aligned_cols=324 Identities=15% Similarity=0.164 Sum_probs=205.2
Q ss_pred CCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCC
Q 012991 49 GSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFH 128 (452)
Q Consensus 49 ~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~ 128 (452)
|..++.|.+++++.+..- ..+ . .+++..-++-+.|.+.++. .+.|-|+++||+|.+.+++ ++|.| .
T Consensus 68 GH~~p~V~~Av~~~l~~G----~~f-g-~Pte~Ei~~Aell~~~~p~--~e~vrfvnSGTEAtmsAiR-lARa~-----T 133 (432)
T COG0001 68 GHAHPAVVEAVQEQLERG----LSF-G-APTELEVELAELLIERVPS--IEKVRFVNSGTEATMSAIR-LARAY-----T 133 (432)
T ss_pred CCCCHHHHHHHHHHHHhc----CCC-C-CCCHHHHHHHHHHHHhcCc--ccEEEEecchhHHHHHHHH-HHHHh-----h
Confidence 467777999999987652 222 1 1345556677888888876 3799999999999999998 56654 5
Q ss_pred CCCEEEEeCCcchhHHHHHHHHHHhcCc-----------------EEEEEeCCCCCCChHHHHHHHHHHHhccccCCCce
Q 012991 129 RNDTVLMLHCAFQAVKKSIQAYVTRAGG-----------------SVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMI 191 (452)
Q Consensus 129 ~g~~Vl~~~~~~~s~~~~~~~~a~~~g~-----------------~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~ 191 (452)
.+++|+..+.+|++....+-.-+. .|. .+..+ |.++ ++.+++++++. ++++
T Consensus 134 gR~kIikF~G~YHG~~D~~lv~ag-sg~~t~g~p~s~Gvp~~~a~~ti~~----~yND----~~al~~~~~~~---g~~I 201 (432)
T COG0001 134 GRDKIIKFEGCYHGHSDSLLVKAG-SGAATLGSPSSPGVPADVAKHTLVL----PYND----LEALEEAFEEY---GDDI 201 (432)
T ss_pred CCCeEEEEcCCCCCCccHHHhhcC-cCcccCCCCCCCCCChhhhccEEEe----cCCC----HHHHHHHHHHc---CCcE
Confidence 678999999999998777644211 111 11122 2233 78888888764 5789
Q ss_pred EEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccccCCccc----cccccCccEEEEcCcccCcCCCCcEE
Q 012991 192 RLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHAMGSIKI----DVKEIGADFYVSNLHKWFFCPPSVAF 263 (452)
Q Consensus 192 ~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~~g~~~~----~~~~~~~d~~~~s~~K~l~g~~G~G~ 263 (452)
++|+++......|.+.| ++.|.++|+++|+ ++|.|++....-.++ ++....+|+.+++ |.++|+..+|.
T Consensus 202 AaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~-lLI~DEViTGFR~~~gGaq~~~gi~PDlttlG--KiIGGGlP~ga 278 (432)
T COG0001 202 AAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGA-LLIFDEVITGFRVALGGAQGYYGVEPDLTTLG--KIIGGGLPIGA 278 (432)
T ss_pred EEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCc-EEEEecchhhcccCCcccccccCcCcchhhhh--hhhcCCcceee
Confidence 99999988888899887 6689999999999 999999875322221 2333457887776 98888777899
Q ss_pred EEEecCccccCCCCCceeccCCCCcccccccccccCcc--ccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHH
Q 012991 264 LYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYS--AQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANA 341 (452)
Q Consensus 264 l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 341 (452)
+-.+.++.+. ..|.- ..+..||.+.. ++.+-.++++.+.+ .+...+++.++.+.|.+.|++.
T Consensus 279 ~gGr~eiM~~--~~p~g----------~vyqaGT~sgnplamaAG~atl~~l~~----~~~~y~~l~~~~~~L~~gl~~~ 342 (432)
T COG0001 279 FGGRAEIMEQ--LAPLG----------PVYQAGTLSGNPLAMAAGLATLEELMT----EEGVYERLDALGERLAEGLRAA 342 (432)
T ss_pred eccHHHHHhh--hCCCC----------CccccCCCCCcHHHHHHHHHHHHHHHh----cccHHHHHHHHHHHHHHHHHHH
Confidence 8899998885 22221 11122444332 23333334444443 1235667777777777777654
Q ss_pred c---CCCcCCCcccccceEEEEcCC--ccccC-----ChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCC
Q 012991 342 W---GTSLGSPPEICAAMVMVGLPS--RLRVM-----GEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGI 411 (452)
Q Consensus 342 ~---~~~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~ 411 (452)
. ++.+.... .+.++.+.+-+ ..... +......+...|.++ ||++++...
T Consensus 343 ~~~~g~~~~v~~--~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~-GV~l~ps~~------------------ 401 (432)
T COG0001 343 AERHGIPLTVNR--VGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNR-GVYLAPSQF------------------ 401 (432)
T ss_pred HHHhCCCeEEee--ecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhC-CcccCCccc------------------
Confidence 2 44332211 12333333211 10000 011123455566565 999863221
Q ss_pred ccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 412 ITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 412 ~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
...=+|.. +|++||+++++++.++++.
T Consensus 402 --ea~flS~a--hte~di~~~~~a~~~~~~~ 428 (432)
T COG0001 402 --EAGFLSTA--HTEEDIDRTLEAADEAFKE 428 (432)
T ss_pred --cceeeecc--cCHHHHHHHHHHHHHHHHH
Confidence 23344544 5999999999999988764
No 343
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.73 E-value=4e-15 Score=149.23 Aligned_cols=351 Identities=9% Similarity=0.119 Sum_probs=210.4
Q ss_pred CCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC-
Q 012991 48 FGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR- 126 (452)
Q Consensus 48 ~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~- 126 (452)
.|..++.|.+++.+.+.... ..... ....+...++.++|++++... .+.++|++|||+|++.++. ++|.+....
T Consensus 70 lGh~~p~v~~Ai~~ql~~l~-~~~~~--~~~~~~~~~lae~L~~~~p~~-~~~v~f~~SGseAve~Alk-lAr~~~~~~g 144 (460)
T PRK06916 70 HGHQVPELDEAIREQLNKIA-HSTLL--GLANVPSILLAEKLIEVVPEG-LKKVFYSDSGATAVEIAIK-MAFQYWQNKG 144 (460)
T ss_pred cCCCCHHHHHHHHHHHHhCC-Ccccc--ccCCHHHHHHHHHHHHhCCCC-CCEEEEeCCcHHHHHHHHH-HHHHHHHhcC
Confidence 46788889999999887531 11111 112344567888888887542 3689999999999999998 445432111
Q ss_pred CCCCCEEEEeCCcchhHHHHHHHHHHhcC---------cEEEEEeCCC----CC--CCh---HHHHHHHHHHHhccccCC
Q 012991 127 FHRNDTVLMLHCAFQAVKKSIQAYVTRAG---------GSVVEVQLPF----PL--ASE---EEIINEFKKGIEKGKKDG 188 (452)
Q Consensus 127 ~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g---------~~v~~~~~~~----~~--~~~---~~~~~~l~~~i~~~~~~~ 188 (452)
...+.+|+....+|++.......+..... ..+..++.+. +. +.+ ...++.+++.++.. .
T Consensus 145 ~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~ 221 (460)
T PRK06916 145 KPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEK---H 221 (460)
T ss_pred CCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhC---C
Confidence 12346899999988886544322111000 1122232210 00 101 11267777777532 4
Q ss_pred CceEEEEEec-cCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEEEEcCcccCcCC
Q 012991 189 KMIRLAIIDH-ITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLHKWFFCP 258 (452)
Q Consensus 189 ~~~~lv~~~~-~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~l~g~ 258 (452)
+++.+|+++. +....|.+.+ +++|.++|++||+ ++|+|+++. +|-.. .+.....+|+++++ |.+.|+
T Consensus 222 ~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~-llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~~g--K~l~gG 298 (460)
T PRK06916 222 EEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNV-LFITDEVATGFGRTGKMFACEHENVTPDIMTAG--KGLTGG 298 (460)
T ss_pred CcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCC-EEEeechhhCCCcCchhhHHHhcCCCCCeeeee--hhhhcC
Confidence 6899999998 5777787754 7789999999999 899999975 33221 12223468998875 988766
Q ss_pred C-CcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Q 012991 259 P-SVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARM 337 (452)
Q Consensus 259 ~-G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~ 337 (452)
. .+|.+++++++.+. +..... .........++.+ +.....+..+.++.+.+ +.+.++++++.+++.+.
T Consensus 299 ~~Pi~av~~~~ei~~~-~~~~~~---~~~~~~~~~T~~g--npl~~aaa~a~l~~l~~-----~~l~~~~~~~g~~l~~~ 367 (460)
T PRK06916 299 YLPIAITVTTDEIYNA-FYGDYE---EQKTFFHGHSYTG--NPLGCAVALANLELYEK-----TNLIEQVARKTEYVATQ 367 (460)
T ss_pred ccccceeeecHHHHHH-hhcccc---ccCccccCCCCCC--CHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHH
Confidence 3 58888898887764 110000 0000000111112 22233334445555543 34678889999999999
Q ss_pred HHHHcCCCcCCCcccccceEEEEcCCccccCC----hhh-HHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCc
Q 012991 338 LANAWGTSLGSPPEICAAMVMVGLPSRLRVMG----EDD-ALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGII 412 (452)
Q Consensus 338 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~ 412 (452)
|.++.....+......+.++.+.+.+....++ ... ...+...+.++ ||.+.. .
T Consensus 368 l~~l~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~-Gvl~~~---------------------~ 425 (460)
T PRK06916 368 LEDLFALKHVGDIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSREL-GMLTRP---------------------L 425 (460)
T ss_pred HHHhhcCCCeEEeecCCceeeEEeecccccccCCCchhhHHHHHHHHHHHC-CeEEEe---------------------c
Confidence 98764332222233345555555531100000 111 34677777664 999842 1
Q ss_pred cceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 413 TGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 413 ~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
++.+|+.++...|++||+.+++++++.++.
T Consensus 426 g~~l~~~Ppl~it~~~id~~~~~l~~~l~~ 455 (460)
T PRK06916 426 GNTIVFMPPLASTIDELDEMLRILYKAISD 455 (460)
T ss_pred CCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 258999999889999999999999999864
No 344
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.73 E-value=6.2e-15 Score=147.76 Aligned_cols=353 Identities=11% Similarity=0.085 Sum_probs=209.3
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCC----CCCCcEEEecChhHHHHHHHHHhhccc
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINA----DDVGEISLVDNATTAAAIVLQQIGRGF 122 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~i~~t~g~t~a~~~~~~~l~~~~ 122 (452)
..|...+.+.+++.+.+.... ..... .-..+...++-+++++++.. ++.+.++|+++||+|++.++. ++|.|
T Consensus 77 ~lGh~~p~i~~Ai~~q~~~l~-~~~~~--~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlK-lAr~~ 152 (472)
T PRK08742 77 LFGHAEPRIGAAIAAQAGELE-QVMLA--GFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALK-MAFHY 152 (472)
T ss_pred cCCCCCHHHHHHHHHHHHhCC-Ccccc--ccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHH-HHHHH
Confidence 456777889999988876431 11111 11234456778888887743 123689999999999999998 45554
Q ss_pred ccCCCCC-CCEEEEeCCcchhHHHHHHHHHHhc------C---cEEEEEeCCCC----CC-C--h--HHHHHHHHHHHhc
Q 012991 123 TEGRFHR-NDTVLMLHCAFQAVKKSIQAYVTRA------G---GSVVEVQLPFP----LA-S--E--EEIINEFKKGIEK 183 (452)
Q Consensus 123 ~~~~~~~-g~~Vl~~~~~~~s~~~~~~~~a~~~------g---~~v~~~~~~~~----~~-~--~--~~~~~~l~~~i~~ 183 (452)
....-.+ +.+|+....+|++.......+.... + ..+..++.+.. .. . + ....+.+++.++.
T Consensus 153 ~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 232 (472)
T PRK08742 153 FHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQ 232 (472)
T ss_pred HHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHh
Confidence 2111112 4689988888888653332211000 0 01222322110 00 0 0 1125777777753
Q ss_pred cccCCCceEEEEEec-cCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEEEEcCcc
Q 012991 184 GKKDGKMIRLAIIDH-ITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLHK 253 (452)
Q Consensus 184 ~~~~~~~~~lv~~~~-~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K 253 (452)
. .+++.+|+++. .....|.+.| ++++.++|++||+ ++|+|+++. +|-.. .+.....+|+++++ |
T Consensus 233 ~---~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gi-llI~DEV~TGfGRtG~~~a~e~~gv~PDiv~~g--K 306 (472)
T PRK08742 233 S---PGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGA-FLIADEIATGFGRTGTLFACEQAGVMPDLLCLS--K 306 (472)
T ss_pred C---CCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCC-EEEEechhhCCCCCccchHHHhcCCCCCEEEEc--c
Confidence 2 46789999997 4666787655 7789999999999 999999975 44332 22233468999996 9
Q ss_pred cCcCCC-CcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q 012991 254 WFFCPP-SVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQAL 332 (452)
Q Consensus 254 ~l~g~~-G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~ 332 (452)
.+.|+. .+|.+++++++.+. + .... .........++.| +..+..+..++++.+.+ +.+.++.+++.+
T Consensus 307 gl~gG~~Plaav~~~~ei~~~-~-~~~~---~~~~~~h~~T~~g--npl~~Aaa~a~L~~i~~-----~~l~~~~~~~g~ 374 (472)
T PRK08742 307 GLTGGFLPLSAVLATQQLYDA-F-LDDS---RERAFLHSHSYTG--NPLACAAALATLDIFAD-----DDVIARNQPTAA 374 (472)
T ss_pred cccCCCCCcceeeccHHHHHH-h-hccC---ccCccCcCCCCCc--cHHHHHHHHHHHHHHHH-----CCHHHHHHHHHH
Confidence 887663 58888888887664 1 1100 0000000111112 22233344445555553 345677777777
Q ss_pred HHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCCh----hh-HHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCC
Q 012991 333 KMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGE----DD-ALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARD 407 (452)
Q Consensus 333 ~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~ 407 (452)
++.+.+..+.....+......+.++.+.+......... .. ...+.+.+.++ ||.+..
T Consensus 375 ~l~~~~~~~~~~~~i~dvRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~----------------- 436 (472)
T PRK08742 375 RMTQLAAQIGEHPHVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALAR-GVVLRP----------------- 436 (472)
T ss_pred HHHHHHHHHhcCCCeeeEeccceEEEEEeccCccccccCCchhHHHHHHHHHHHHC-CeEEEe-----------------
Confidence 77766655433333333334466666666311000000 11 24567777665 999852
Q ss_pred CCCCccceEEecccccCCHHHHHHHHHHHHHHHhcc
Q 012991 408 KDGIITGYARISHQVYNTLEDYEKFRDAVILLVEEG 443 (452)
Q Consensus 408 ~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~~ 443 (452)
.++.||+.++...|++||+.++++|++.+++.
T Consensus 437 ----~g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 437 ----LGDVLYWMPPYCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred ----cCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 12589999999999999999999999998764
No 345
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.73 E-value=5.1e-15 Score=147.57 Aligned_cols=339 Identities=13% Similarity=0.127 Sum_probs=194.6
Q ss_pred CCCCCcHHHH--HHHHHHHHHHhc-CCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccc
Q 012991 47 SFGSCPKSVL--ADQQKWQLKFLQ-QPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFT 123 (452)
Q Consensus 47 ~~~~~p~~v~--e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~ 123 (452)
..|...+.|. +++.+.+..... .+... ....+...++.++++++.+.++.+.++|++|||+|++.++. ++|+|+
T Consensus 51 ~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEAve~Alk-lAr~~t 127 (431)
T TIGR03251 51 ALGMNHPALVDDLAFRARLGAAAVNKPSNS--DVYTVAMARFVDTFARVLGDPALPHLFFIEGGALAVENALK-TAFDWK 127 (431)
T ss_pred CCCCCChhhhHHHHHHHHHHHhhhcccccC--CCCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHHHHHHHH-HHHHHh
Confidence 3466667788 888887765421 11111 11233345566667776533234689999999999999998 556553
Q ss_pred cC----CCC---CCCEEEEeCCcchhHHHHHHHHHHhcCcEEE--------EEeCC---CCCC----C---h--HHHHHH
Q 012991 124 EG----RFH---RNDTVLMLHCAFQAVKKSIQAYVTRAGGSVV--------EVQLP---FPLA----S---E--EEIINE 176 (452)
Q Consensus 124 ~~----~~~---~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~--------~~~~~---~~~~----~---~--~~~~~~ 176 (452)
.. .-+ .+.+|+....+|++.......+.......-. .++.+ .+.. + . ...+++
T Consensus 128 ~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~ 207 (431)
T TIGR03251 128 SRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQ 207 (431)
T ss_pred hcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHH
Confidence 11 001 1468999998888865443322111000000 01110 0100 0 0 111556
Q ss_pred HHHHHhccccCCCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEE
Q 012991 177 FKKGIEKGKKDGKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFY 247 (452)
Q Consensus 177 l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~ 247 (452)
+++.++.. .+++.+|+++......|.+.+ +++|.++|++||+ ++|+|++++ +|... .+.....+|++
T Consensus 208 ~~~~~~~~---~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~-llI~DEV~tG~GrtG~~~a~~~~gv~PDi~ 283 (431)
T TIGR03251 208 ARAAFAER---PHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDA-LLIFDEVQTGVGLTGTAWAYQQLGVQPDIV 283 (431)
T ss_pred HHHHHHhC---CCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCC-EEEEecchhccCccchHHHHHhcCCCCCEE
Confidence 66677532 468999999999888898753 7899999999999 999999987 54431 22333468999
Q ss_pred EEcCcccCcCCCCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHH
Q 012991 248 VSNLHKWFFCPPSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRN 327 (452)
Q Consensus 248 ~~s~~K~l~g~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~ 327 (452)
+++ |.+ |. .|++. .+++.+. ....+ ........++ +.+.....+..++++.+.+ +.+.+++
T Consensus 284 ~~g--K~~--~~-~g~~~-~~~i~~~--~~~~~----~~~~~~~~T~--~gnpl~~aaa~a~L~~l~~-----~~l~~~~ 344 (431)
T TIGR03251 284 AFG--KKT--QV-CGIMA-GRRVDEV--ADNVF----AVPSRLNSTW--GGNLVDMVRATRILEIIEE-----ERLVDNA 344 (431)
T ss_pred Eec--ccC--cc-ceEEe-cchHHHh--hhhcc----cCccccCCCC--CCCHHHHHHHHHHHHHHHh-----cCHHHHH
Confidence 875 764 33 35553 3332111 00000 0000011111 1222344445556666654 2345566
Q ss_pred HHHHHHHHHHHHHHc-CCC-cCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCC
Q 012991 328 HEQALKMARMLANAW-GTS-LGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGA 405 (452)
Q Consensus 328 ~~~~~~l~~~L~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~ 405 (452)
+++.+++.+.|.++. ... +.......+.++.+.++ +......+.+.|.+ .||.+..
T Consensus 345 ~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~------~~~~~~~~~~~l~~-~Gvl~~~--------------- 402 (431)
T TIGR03251 345 RVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLP------STADRDEVIRQLYR-EGVLLLG--------------- 402 (431)
T ss_pred HHHHHHHHHHHHHHHHhCccceecccccceeEEEEeC------CHHHHHHHHHHHHh-CCeEEec---------------
Confidence 677777777776541 122 22222233667677775 22234578888876 4999842
Q ss_pred CCCCCCccceEEecccccCCHHHHHHHHHHHHH
Q 012991 406 RDKDGIITGYARISHQVYNTLEDYEKFRDAVIL 438 (452)
Q Consensus 406 ~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~ 438 (452)
...+.+|++++..+|++||++++++|.+
T Consensus 403 -----~g~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 403 -----CGERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred -----CCCCeEEEECCccCCHHHHHHHHHHHHh
Confidence 1125799999999999999999999975
No 346
>PRK06917 hypothetical protein; Provisional
Probab=99.73 E-value=9.4e-15 Score=146.01 Aligned_cols=358 Identities=11% Similarity=0.102 Sum_probs=209.3
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|...+.|.+++.+.+..... ........+...++.++|++.+... .+.++|+++||+|++.++.. +|++....
T Consensus 44 ~lGh~hp~v~~Ai~~ql~~~~~---~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~sGsEAve~Alkl-Ar~~~~~r 118 (447)
T PRK06917 44 GIGHGVKEIADAIKEQAEEVSF---VYRSQFTSEPAEKLAKKLSDLSPGD-LNWSFFVNSGSEANETAMKI-AIQHFQER 118 (447)
T ss_pred cCCCCCHHHHHHHHHHHhhCcC---ccccccCCHHHHHHHHHHHHhCCCC-CCEEEEeCChHHHHHHHHHH-HHHHHHhc
Confidence 3567778899999998875311 1001112455677888888887542 36889999999999999984 44432111
Q ss_pred C-CCCCEEEEeCCcchhHHHHHHHHHHhcCc---------EEEEEeCCC----CCCCh-----HHHHHHHHHHHhccccC
Q 012991 127 F-HRNDTVLMLHCAFQAVKKSIQAYVTRAGG---------SVVEVQLPF----PLASE-----EEIINEFKKGIEKGKKD 187 (452)
Q Consensus 127 ~-~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~---------~v~~~~~~~----~~~~~-----~~~~~~l~~~i~~~~~~ 187 (452)
- ..+.+|+.....|++.......+...... .+..++.+. +.++. ....+.+++.+++..
T Consensus 119 g~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~-- 196 (447)
T PRK06917 119 GIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIG-- 196 (447)
T ss_pred CCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcC--
Confidence 1 23468888888888865444322111000 112222110 11111 111467777775321
Q ss_pred CCceEEEEEeccCCC-Cccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEEEEcCcccCcC
Q 012991 188 GKMIRLAIIDHITSM-PCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLHKWFFC 257 (452)
Q Consensus 188 ~~~~~lv~~~~~~n~-tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~l~g 257 (452)
.+++.+|+++..... -|.+.| +++|.++|++||+ ++|+|+++. +|-.. .......+|+++++ |.+.|
T Consensus 197 ~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~-llI~DEv~tGfGRtG~~~a~~~~gv~PDi~~~g--K~l~~ 273 (447)
T PRK06917 197 AEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDI-LFIADEVMTGLGRTGAMFAMEHWGVEPDIMTLG--KGLGA 273 (447)
T ss_pred CCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCC-EEEEechhhCcCcccchhhHHhcCCCCCEEEee--ehhcc
Confidence 247899999987653 346554 6789999999999 899999976 33221 12223358988775 98876
Q ss_pred CC-CcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 012991 258 PP-SVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMAR 336 (452)
Q Consensus 258 ~~-G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~ 336 (452)
+. .+|.+.+++++.+. + .+.. + ......+ ...+.....+..+.++.+.+ +.+.++++++.++|.+
T Consensus 274 G~~Pi~a~~~~~~i~~~-~-~~~~----~-~~~~~~T--~~gnpl~~aaa~a~l~~l~~-----~~l~~~~~~~g~~l~~ 339 (447)
T PRK06917 274 GYTPIAATVVSDRVMEP-I-LRGS----R-SIMSGHT--LSANPLSAATALAVLEYMEK-----HNLPEKAAEKGEYLIK 339 (447)
T ss_pred CCcceEEEEEcHHHHHH-H-hccC----c-ccccccC--CCCCHHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHHH
Confidence 53 47888888877664 1 1100 0 0000001 11222233334445555543 3467788899999999
Q ss_pred HHHHHcC-CCcCCCcccccceEEEEcCCccccC-----ChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCC
Q 012991 337 MLANAWG-TSLGSPPEICAAMVMVGLPSRLRVM-----GEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDG 410 (452)
Q Consensus 337 ~L~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~ 410 (452)
.|.++.. ..++......+.++.+.+-.....+ +..-...+...+.++ ||.+...... .. +
T Consensus 340 ~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~~~~-~~------------g 405 (447)
T PRK06917 340 GLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKN-GLLLYPAVAG-QD------------G 405 (447)
T ss_pred HHHHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhC-CcEEEecccc-cC------------C
Confidence 9887632 2333333334556656552100000 011245677777664 9998532110 00 1
Q ss_pred CccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 411 IITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 411 ~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
..++.+|+++....|++||+.+++++.+.+++
T Consensus 406 ~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~ 437 (447)
T PRK06917 406 KEGDAVIIAPPMTITYSELDELLSIFAKSVEE 437 (447)
T ss_pred CCCCEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 23478999999888999999999999998864
No 347
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.73 E-value=2.3e-15 Score=150.17 Aligned_cols=343 Identities=15% Similarity=0.137 Sum_probs=204.6
Q ss_pred CCCCeEEeccC----CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHH
Q 012991 36 HQHGVARINNG----SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAA 111 (452)
Q Consensus 36 ~~~~~~~l~~~----~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~ 111 (452)
.++.++.+..+ ..|..++.+.+++.+.+... . . .+...+...++.+++++++.- .+.++|++||++|+
T Consensus 48 dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~---~-~--~~~~~~~~~~la~~L~~~~~~--~~~v~~~~sGseA~ 119 (426)
T PRK00062 48 DGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKG---L-S--FGAPTELEVELAELVIELVPS--IEMVRMVNSGTEAT 119 (426)
T ss_pred CCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhC---C-c--CCCCCHHHHHHHHHHHHhCCC--CCEEEEecCHHHHH
Confidence 34555555443 24577888999999888652 1 1 122345567888888888742 36899999999999
Q ss_pred HHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh----cC------cE--E--EEEeCCCCCCChHHHHHHH
Q 012991 112 AIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR----AG------GS--V--VEVQLPFPLASEEEIINEF 177 (452)
Q Consensus 112 ~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~----~g------~~--v--~~~~~~~~~~~~~~~~~~l 177 (452)
..++.... . ...+++|+..++.|++........+.. .+ .. + ..+.. +..+ .+.+
T Consensus 120 e~Aik~a~-~-----~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d----~~~l 187 (426)
T PRK00062 120 MSAIRLAR-G-----YTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTA--PYND----LEAV 187 (426)
T ss_pred HHHHHHHH-H-----HhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEc--CCCC----HHHH
Confidence 99998642 2 234678999999998864333221000 00 00 0 01111 1111 5777
Q ss_pred HHHHhccccCCCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccccCCcc----ccccccCccEEEE
Q 012991 178 KKGIEKGKKDGKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHAMGSIK----IDVKEIGADFYVS 249 (452)
Q Consensus 178 ~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~~g~~~----~~~~~~~~d~~~~ 249 (452)
++.+++. .+++++|+++....++|.+.| +++|.++|++||+ ++|+|++|+..-.. .+.....+|++
T Consensus 188 ~~~i~~~---~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~-llI~DEv~~G~r~g~~~~~~~~~~~pDi~-- 261 (426)
T PRK00062 188 EELFEEY---GDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGA-LLIFDEVMTGFRVALGGAQGYYGVTPDLT-- 261 (426)
T ss_pred HHHHHhC---CCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCC-EEEEeechhccccCCccHHHHhCCCcchH--
Confidence 7777532 357889999988888999988 8999999999999 89999998622111 11112246764
Q ss_pred cCcccCcCCCCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHH
Q 012991 250 NLHKWFFCPPSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHE 329 (452)
Q Consensus 250 s~~K~l~g~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~ 329 (452)
+++|.+.++..+|++++++++.+. +. +. +. .... .+...+.....+..++++.+.+ +.+.++.++
T Consensus 262 ~~gK~l~~G~p~ga~~~~~~i~~~-~~-~~-----~~--~~~~-~T~~~~p~~~aaa~a~L~~~~~-----~~~~~~~~~ 326 (426)
T PRK00062 262 TLGKIIGGGLPVGAFGGRREIMEQ-LA-PL-----GP--VYQA-GTLSGNPLAMAAGLATLKLLKE-----PGFYEELEA 326 (426)
T ss_pred hhhhHhhCCCcceeeeEHHHHHHh-hc-cC-----CC--ceec-ccCcCCHHHHHHHHHHHHHHhc-----chHHHHHHH
Confidence 556987654336888888877765 21 10 00 0000 0111222333444445555543 246777788
Q ss_pred HHHHHHHHHHHHc-CCCcCCCcccccceEEEEcCCccc-------cCChhhHHHHHHHHhhhcceEeeecccCCCCCCCC
Q 012991 330 QALKMARMLANAW-GTSLGSPPEICAAMVMVGLPSRLR-------VMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQP 401 (452)
Q Consensus 330 ~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~ 401 (452)
+.+++++.|.++. ...+.......+.++.+.+..... ..+......+.+.|.++ ||.+....
T Consensus 327 ~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~-Gv~v~~~~--------- 396 (426)
T PRK00062 327 LTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDE-GVYLAPSQ--------- 396 (426)
T ss_pred HHHHHHHHHHHHHHHcCCceEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHC-CeEeecCC---------
Confidence 8888888876541 111111111235566555531100 00111235788888765 99985321
Q ss_pred CCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 402 QAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 402 ~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
.+.+++++ .+|++||++++++|++++..
T Consensus 397 -----------~~~~~~~~--~~t~~ei~~~~~~l~~~l~~ 424 (426)
T PRK00062 397 -----------FEAGFVSA--AHTDEDIEKTLEAARKAFAA 424 (426)
T ss_pred -----------cCceeeec--cCCHHHHHHHHHHHHHHHHh
Confidence 13456654 45999999999999998853
No 348
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.72 E-value=9.2e-15 Score=146.57 Aligned_cols=352 Identities=12% Similarity=0.112 Sum_probs=211.5
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|...+.+.+++.+.+.... .... .....+...++.+++++++..+ .+.+.|+++||+|++.++. ++|.|....
T Consensus 60 ~lGh~~p~v~~Ai~~ql~~l~-~~~~--~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~sGsEAve~AlK-lAr~~~~~~ 134 (466)
T PRK07030 60 VFGHANPRINQRIKDQVDQLE-HVIL--AGFSHEPVIELSERLVKITPPG-LSRCFYADNGSSAIEVALK-MSFHYWRNR 134 (466)
T ss_pred cCCCCCHHHHHHHHHHHHhcC-Cccc--cccCCHHHHHHHHHHHHhCCCC-cCEEEEeCCcHHHHHHHHH-HHHHHHHHh
Confidence 356777889999998886531 1111 0112455677888888877532 4699999999999999998 444442111
Q ss_pred C-CCCCEEEEeCCcchhHHHHHHHHHHhc------C---cEEEEEeCCCC----CC---ChH--HHHHHHHHHHhccccC
Q 012991 127 F-HRNDTVLMLHCAFQAVKKSIQAYVTRA------G---GSVVEVQLPFP----LA---SEE--EIINEFKKGIEKGKKD 187 (452)
Q Consensus 127 ~-~~g~~Vl~~~~~~~s~~~~~~~~a~~~------g---~~v~~~~~~~~----~~---~~~--~~~~~l~~~i~~~~~~ 187 (452)
- ..+.+|+....+||+.......+.... + ..+..++.+.. .. ... ..++.+++.+++.
T Consensus 135 g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~--- 211 (466)
T PRK07030 135 GKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEH--- 211 (466)
T ss_pred CCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhC---
Confidence 1 224678888888888653332211100 0 01222322110 00 001 1156778877532
Q ss_pred CCceEEEEEec-cCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEEEEcCcccCcC
Q 012991 188 GKMIRLAIIDH-ITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLHKWFFC 257 (452)
Q Consensus 188 ~~~~~lv~~~~-~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~l~g 257 (452)
.+++.+|+++. +....|.+.+ +++|.++|++||+ ++|+|+++. +|-.. .+.....+|+++++ |.+.|
T Consensus 212 ~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~-llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~~g--Kgl~g 288 (466)
T PRK07030 212 HDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGV-HLIHDEIAVGFGRTGTMFACEQAGIRPDFLCLS--KALTG 288 (466)
T ss_pred CCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCC-EEEEeehhhCcCccccchHHHhcCCCCCEEeee--hhccC
Confidence 46899999997 4666788765 7789999999999 999999975 44321 12333468999996 98877
Q ss_pred CC-CcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 012991 258 PP-SVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMAR 336 (452)
Q Consensus 258 ~~-G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~ 336 (452)
+. .+|.+++++++.+. +.... . .........++.+ +..+..+..+.++.+.+ +.+.++.+++.+++.+
T Consensus 289 G~~Pi~av~~~~ei~~~-~~~~~-~--~~~~~~h~~T~~g--npla~aaa~a~L~~i~~-----~~l~~~~~~~G~~l~~ 357 (466)
T PRK07030 289 GYLPLAAVLTTDTVYQA-FYDDY-P--TLRAFLHSHSYTG--NPLACAAALATLDIFEQ-----DNVIENNRALARRMAE 357 (466)
T ss_pred CcccceEEEecHHHHHH-Hhccc-c--cccccccCCCCCC--CHHHHHHHHHHHHHHHh-----cCHHHHHHHHHHHHHH
Confidence 63 58888898888764 11000 0 0000001111112 22233334445555553 4467888899999999
Q ss_pred HHHHHcCCCcCCCcccccceEEEEcCCcccc----CCh-hhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCC
Q 012991 337 MLANAWGTSLGSPPEICAAMVMVGLPSRLRV----MGE-DDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGI 411 (452)
Q Consensus 337 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~ 411 (452)
.|.++.....+......+.++.+.+...... ... .....+.+.+.++ |+.+..
T Consensus 358 ~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~-Gvl~~~--------------------- 415 (466)
T PRK07030 358 ATAHLADHPHVAEVRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALER-GALLRP--------------------- 415 (466)
T ss_pred HHHHHhcCCCEEEeEeceeEEEEEeccCccccccCcchhHHHHHHHHHHHHC-CeEEEe---------------------
Confidence 9987633222222233456666655310000 000 1124677777664 998842
Q ss_pred ccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 412 ITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 412 ~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
.++.+|+.++...|++||+.+++++.+.+++
T Consensus 416 ~g~~i~~~Ppl~it~~eid~~~~~l~~al~~ 446 (466)
T PRK07030 416 LGSVVYFLPPYVITPEQIDFLAEVASEGIDI 446 (466)
T ss_pred cCCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 1257999999888999999999999999875
No 349
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.72 E-value=9.3e-15 Score=145.36 Aligned_cols=335 Identities=13% Similarity=0.103 Sum_probs=192.3
Q ss_pred CCCCcHHHHHHHHHH-HHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 48 FGSCPKSVLADQQKW-QLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 48 ~~~~p~~v~e~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
.|..++.+.+++.+. .................++.+.+.+.+++++.. +.+.++|++||++|++.++. ++++|....
T Consensus 72 lGh~~p~i~~Ai~~q~~~~~l~~~~~~~~~~~~~la~~l~~~l~~~~p~-~~~~v~f~~SGsEAvE~AlK-lAr~~~~~~ 149 (464)
T TIGR00699 72 IGYNNPALLKAAQSPEMATTLINRPALGNFPSKDWAKILKEGILKVAPK-GQDQVWTGMSGSDANELAFK-AAFMYYRSK 149 (464)
T ss_pred CCCCCHHHHHHHHHHHHHHhhcccccCCcHHHHHHHHHHHHhHHhhCCC-CcCEEEEeCCcHHHHHHHHH-HHHHHHHhc
Confidence 367778899999874 222111111111111122333333334555543 24689999999999999998 444442100
Q ss_pred ---C----------------CC---CCEEEEeCCcchhHHHHHHHHHHhc-----C---cEEEEEeCCC---CC----C-
Q 012991 127 ---F----------------HR---NDTVLMLHCAFQAVKKSIQAYVTRA-----G---GSVVEVQLPF---PL----A- 168 (452)
Q Consensus 127 ---~----------------~~---g~~Vl~~~~~~~s~~~~~~~~a~~~-----g---~~v~~~~~~~---~~----~- 168 (452)
. .+ ..+||....+||+.......+.... + ..+..++.+. +. .
T Consensus 150 ~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~ 229 (464)
T TIGR00699 150 QRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKE 229 (464)
T ss_pred CCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCCccccccccccc
Confidence 0 01 2379999999888655443221100 1 0111222110 00 0
Q ss_pred -Ch--HHHHHHHHHHHhccccCCCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc----
Q 012991 169 -SE--EEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK---- 236 (452)
Q Consensus 169 -~~--~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~---- 236 (452)
.. ...++.+++.+++. ..++.+|+++......|.+.| +++|.++|++||+ ++|+|+++. +|-..
T Consensus 230 ~~~~~~~~l~~l~~~l~~~---~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~-lLI~DEV~tGfGrtG~~fa 305 (464)
T TIGR00699 230 NAKEEQRCLEEVEDLIKKW---HKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNV-AFIVDEVQTGVGATGKFWA 305 (464)
T ss_pred chhHHHHHHHHHHHHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCC-EEEEeeeeeCCCCCcchhH
Confidence 01 12267788888532 457999999999988899987 8999999999999 899999974 33321
Q ss_pred cccccc--CccEEEEcCcccCcCCCCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHH
Q 012991 237 IDVKEI--GADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVS 314 (452)
Q Consensus 237 ~~~~~~--~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~ 314 (452)
.+.... .+|+++++ |.+.+. |+++.+ +.+.. ..+.. ... +...+..+..+..++++.+.
T Consensus 306 ~e~~gv~~~PDi~t~g--K~lg~g---G~~~~~-~~~~~--~~~~~---------~~~--T~~gnp~~~aaa~a~L~~l~ 366 (464)
T TIGR00699 306 HEHWNLDDPPDMVTFS--KKFQTA---GYFFHD-PAFRP--NKPYR---------QFN--TWMGDPSRALILREIIQEIK 366 (464)
T ss_pred HHhcCCCCCCCEEEeh--hhhccC---Cccccc-hhccC--CCCcc---------ccc--CCCCCHHHHHHHHHHHHHHH
Confidence 111122 38997775 976321 232222 22211 01100 000 11122223333344555555
Q ss_pred HhhcCHHHHHHHHHHHHHHHHHHHHHHc-CCC-cCCCcc--cccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeee
Q 012991 315 RFEGGIDGIMQRNHEQALKMARMLANAW-GTS-LGSPPE--ICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPI 390 (452)
Q Consensus 315 ~~~~g~~~~~~~~~~~~~~l~~~L~~~~-~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~ 390 (452)
+ +.+.++.+++.+++.+.|.++. ... ++.... ..+.++.+.++ +......+.+.+.++ |+.+..
T Consensus 367 ~-----~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~------~~~~~~~i~~~~~~~-Gvl~~~ 434 (464)
T TIGR00699 367 R-----KDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTP------DEAKRDKLLKKARNN-GVNIGG 434 (464)
T ss_pred h-----cCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecC------CHHHHHHHHHHHHHC-CcEEec
Confidence 3 3467777888888888887752 122 222211 34677777775 222356788888775 999852
Q ss_pred cccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHH
Q 012991 391 HYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILL 439 (452)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~ 439 (452)
...+.||+.++...|++||+.++++|.+.
T Consensus 435 --------------------~g~~~ir~~Ppl~it~~eid~~~~~l~~~ 463 (464)
T TIGR00699 435 --------------------CGVKAIRLRPMLVFQKHHADIFLEIISKI 463 (464)
T ss_pred --------------------CCCCeEEEeCCCCCCHHHHHHHHHHHHHh
Confidence 11368999999999999999999999875
No 350
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.72 E-value=2.2e-14 Score=143.75 Aligned_cols=346 Identities=12% Similarity=0.089 Sum_probs=206.9
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCC--CCcEEEe-cChhHHHHHHHHHhhcccc
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADD--VGEISLV-DNATTAAAIVLQQIGRGFT 123 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~--~~~i~~t-~g~t~a~~~~~~~l~~~~~ 123 (452)
..|..++.|.+++.+.+......... .-..+...++.+++.+++..+- .+.++|+ ++|++|++.++.. +|.+
T Consensus 76 ~lGh~~p~v~~Ai~~ql~~~~~~~~~---~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~Alkl-Ar~~- 150 (464)
T PRK06938 76 ALGHNHPVVIEAIQQVLADELPLHTL---DLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKL-VKTA- 150 (464)
T ss_pred ccCCCCHHHHHHHHHHHHhhhccccc---ccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHH-HHHh-
Confidence 35677888999999887542111110 1123444556677777664320 1357675 7999999999984 4433
Q ss_pred cCCCCCCCEEEEeCCcchhHHHHHHHHHHhc------C---cEEEEEeCCCCC----C---Ch-H-HHHHHHHHHHhccc
Q 012991 124 EGRFHRNDTVLMLHCAFQAVKKSIQAYVTRA------G---GSVVEVQLPFPL----A---SE-E-EIINEFKKGIEKGK 185 (452)
Q Consensus 124 ~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~------g---~~v~~~~~~~~~----~---~~-~-~~~~~l~~~i~~~~ 185 (452)
..+.+|+....+||+.......+.... + ..+..++.++.. . +. . ...+.+++.+++..
T Consensus 151 ----tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 226 (464)
T PRK06938 151 ----TGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPE 226 (464)
T ss_pred ----hCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhc
Confidence 345689988888888654443221100 0 123344332110 0 00 1 12677888885321
Q ss_pred cCCCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEEEEcCcccCc
Q 012991 186 KDGKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLHKWFF 256 (452)
Q Consensus 186 ~~~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~l~ 256 (452)
...+++.+|+++......|.+.| ++++.++|++||+ ++|.|+++. +|-.. .+.....+|+++++ |.+.
T Consensus 227 ~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~gi-LlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~g--Kglg 303 (464)
T PRK06938 227 SGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGI-PLIVDEIQSGFGRTGKMFAFEHAGIIPDVVVLS--KAIG 303 (464)
T ss_pred cCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCC-EEEEeccccCCCcCcHHHHHHhcCCCCCEEEee--cccc
Confidence 11246899999988877788765 7799999999999 999999975 43221 12223468999997 9887
Q ss_pred CCCCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 012991 257 CPPSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMAR 336 (452)
Q Consensus 257 g~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~ 336 (452)
|+..+|.++.++++ +. + .+.. ...++.| +..+..+..+.++.+.+ +++.++.+++.++|.+
T Consensus 304 gG~PlsAv~~~~~~-~~-~-~~~~---------~~~T~~g--npla~Aaa~a~L~~l~~-----~~l~~~~~~~G~~l~~ 364 (464)
T PRK06938 304 GSLPLAVVVYREWL-DT-W-QPGA---------HAGTFRG--NQMAMAAGSATLRYIKE-----HRLAEHAAAMGERLRE 364 (464)
T ss_pred CCCceEEEeehhHh-hc-c-CCCC---------CCCCCCc--CHHHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHH
Confidence 76668888887764 43 1 1110 0111112 22223333344454443 4567888888999999
Q ss_pred HHHHHc-CCCcCCCcccccceEEEEcCCccccC--------ChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCC
Q 012991 337 MLANAW-GTSLGSPPEICAAMVMVGLPSRLRVM--------GEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARD 407 (452)
Q Consensus 337 ~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~ 407 (452)
.|.++. ...++......+.++.+.+....... +..-...+...+.+ .|+.+....
T Consensus 365 ~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gll~~~~g--------------- 428 (464)
T PRK06938 365 HLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLR-RGLILELGG--------------- 428 (464)
T ss_pred HHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHH-CCeEEeecC---------------
Confidence 988763 23333333344666666653110000 01113457777766 499885311
Q ss_pred CCCCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 408 KDGIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 408 ~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
...+.+|+.++...|++||+.+++++.+.+..
T Consensus 429 ---~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~ 460 (464)
T PRK06938 429 ---RHGSVVRFLPPLIITAEQIDEVAEIFAEAVAA 460 (464)
T ss_pred ---CCCCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 12368999999889999999999999998864
No 351
>PRK06148 hypothetical protein; Provisional
Probab=99.72 E-value=4.2e-15 Score=161.70 Aligned_cols=345 Identities=12% Similarity=0.157 Sum_probs=215.8
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|...+.|.+++.+.+.....+. ....+...++.++|++.+..+ .+.+.|++|||+|++.++. ++|.+
T Consensus 635 ~lGH~hp~v~~Ai~~q~~~l~~~~-----~~~~~~~~~lAe~L~~~~p~~-~~~v~f~nSGsEA~e~Alk-lAr~~---- 703 (1013)
T PRK06148 635 HVGHAHPRVVAAAARQAARLNTNT-----RYLHDAIVAYAERLTATLPDG-LTVAFFVNSGSEANSLALR-LARAH---- 703 (1013)
T ss_pred hcCCCCHHHHHHHHHHHhhcCCcC-----CcCCHHHHHHHHHHHHhCCCC-cCEEEEeCCcHHHHHHHHH-HHHHh----
Confidence 466778889999999887642211 112455677888888887543 4688999999999999998 45544
Q ss_pred CCCCCEEEEeCCcchhHHHHHHHHHH----h-cC----cEEEEEeCC----CCCC--Ch--H-HHHHHHHHHHhccccCC
Q 012991 127 FHRNDTVLMLHCAFQAVKKSIQAYVT----R-AG----GSVVEVQLP----FPLA--SE--E-EIINEFKKGIEKGKKDG 188 (452)
Q Consensus 127 ~~~g~~Vl~~~~~~~s~~~~~~~~a~----~-~g----~~v~~~~~~----~~~~--~~--~-~~~~~l~~~i~~~~~~~ 188 (452)
..+.+|++...+|++.......+.. . .+ ..+..++.+ .+.. +. . ...+.+++.++......
T Consensus 704 -tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~ 782 (1013)
T PRK06148 704 -TGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKG 782 (1013)
T ss_pred -cCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccC
Confidence 3456889888888876533211100 0 01 112222211 0111 11 1 11455666664322224
Q ss_pred CceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc-----ccccccCccEEEEcCcccCcCC
Q 012991 189 KMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK-----IDVKEIGADFYVSNLHKWFFCP 258 (452)
Q Consensus 189 ~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~-----~~~~~~~~d~~~~s~~K~l~g~ 258 (452)
+++++|+++......|.+.+ ++++.++|++||+ ++|+|+++. +|-.. .......+|+++++ |.++|+
T Consensus 783 ~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~-llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~g--K~lggG 859 (1013)
T PRK06148 783 RGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGG-VCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMG--KPIGNG 859 (1013)
T ss_pred CceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCC-EEEEEecccCCCCCCCcchhhhhcCCCcceeeec--ccccCC
Confidence 67999999998888888876 8899999999999 999999984 44332 12223468998886 998877
Q ss_pred CCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHH
Q 012991 259 PSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARML 338 (452)
Q Consensus 259 ~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L 338 (452)
..+|.+++++++.+. + .+ +. ....++.| +..+..+..+.++.+.+ +.+.++.+++.++|.+.|
T Consensus 860 ~Plgav~~~~ei~~~-~-~~------g~--~~~~Tf~g--npla~aaa~a~L~~i~~-----e~l~~~~~~~G~~l~~~L 922 (1013)
T PRK06148 860 HPMGAVVTTREIADS-F-DN------GM--EYFNTFGG--NPVSCAIGLAVLDIIED-----EDLQRNALEIGNYLLAGL 922 (1013)
T ss_pred cceEEEEEcHHHHhh-c-cC------CC--ccccCCCC--CHHHHHHHHHHHHHHhh-----ccHHHHHHHHHHHHHHHH
Confidence 668999999888765 2 11 00 00011112 22223333344555543 456788889999999999
Q ss_pred HHHcC-CCcCCCcccccceEEEEcCCc--cccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccce
Q 012991 339 ANAWG-TSLGSPPEICAAMVMVGLPSR--LRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGY 415 (452)
Q Consensus 339 ~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (452)
.++.. ..++......+.++.+.+... ....+......+.+.+.++ ||.+... +...+.
T Consensus 923 ~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~-Gvl~~~~------------------g~~~~v 983 (1013)
T PRK06148 923 RELQDRFDIIGDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGARER-GILIGTE------------------GPHDNV 983 (1013)
T ss_pred HHHHHhCCCceEEeeeceEEEEEecCCccccCccHHHHHHHHHHHHhC-CeEEecc------------------CCCCCE
Confidence 87632 333333334466666665310 0001111245678888764 9998421 122478
Q ss_pred EEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 416 ARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 416 iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
+|+.++...|++||+.++++|.+++.+
T Consensus 984 lr~~Ppl~it~~~id~~l~~l~~~l~~ 1010 (1013)
T PRK06148 984 LKIRPPLIFSRADADHLLEVLDDVLAA 1010 (1013)
T ss_pred EEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999864
No 352
>PRK07483 hypothetical protein; Provisional
Probab=99.72 E-value=9.9e-15 Score=145.68 Aligned_cols=358 Identities=10% Similarity=0.080 Sum_probs=209.8
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|..++.+.+++.+.+..... .... ....+...++.++|++++... .+.+.|++|||+|++.++. ++|.|....
T Consensus 43 ~lGh~~p~v~~av~~ql~~~~~-~~~~--~~~~~~~~~lae~L~~~~p~~-~~~v~f~~sGsEAve~Alk-lAr~~~~~~ 117 (443)
T PRK07483 43 CLGHSHPRVIAAIHAQIDRLAY-AHTS--FFTTEPAEALADRLVAAAPAG-LEHVYFVSGGSEAVEAALK-LARQYFVEI 117 (443)
T ss_pred ccCCCCHHHHHHHHHHHHhccC-cccc--ccCCHHHHHHHHHHHHhCCCC-CCEEEEcCCcHHHHHHHHH-HHHHHHHhc
Confidence 3567788899999998875310 0110 112344567888888877532 4689999999999999998 455542111
Q ss_pred CCC-CCEEEEeCCcchhHHHHHHHHHHh------cC---cEEEEEeCCCCCCC---------hHH-HHHHHHHHHhcccc
Q 012991 127 FHR-NDTVLMLHCAFQAVKKSIQAYVTR------AG---GSVVEVQLPFPLAS---------EEE-IINEFKKGIEKGKK 186 (452)
Q Consensus 127 ~~~-g~~Vl~~~~~~~s~~~~~~~~a~~------~g---~~v~~~~~~~~~~~---------~~~-~~~~l~~~i~~~~~ 186 (452)
-++ +.+|+....+||+.......+... .+ ..+..++.+++... ... ..+.+++.+.+.
T Consensus 118 g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-- 195 (443)
T PRK07483 118 GQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILEL-- 195 (443)
T ss_pred CCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--
Confidence 112 357888888888865433221110 00 11122322111110 011 146777766421
Q ss_pred CCCceEEEEEeccCC-CCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEEEEcCcccCc
Q 012991 187 DGKMIRLAIIDHITS-MPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLHKWFF 256 (452)
Q Consensus 187 ~~~~~~lv~~~~~~n-~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~l~ 256 (452)
..+++.+|+++.... ..|.+.| ++.|.++|++||+ ++|+|+++. +|-.. .+.....+|+++++ |.+.
T Consensus 196 ~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gi-llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g--K~l~ 272 (443)
T PRK07483 196 GPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGV-LLILDEVMCGMGRTGTLFACEEDGVAPDLVTIA--KGLG 272 (443)
T ss_pred CCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCC-EEEEecceeCcccCcHHHHHhhcCCCCCeeeeh--hhhc
Confidence 135789999998775 3477665 7899999999999 899999975 43321 12223468999986 9887
Q ss_pred CCC-CcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 012991 257 CPP-SVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMA 335 (452)
Q Consensus 257 g~~-G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~ 335 (452)
|+. .+|.+++++++.+. + .+.. .......++.+ +..+..+..+.++.+.+ +.+.++.+++.++|.
T Consensus 273 gG~~Pi~av~~~~~i~~~-~-~~~~-----~~~~h~~T~~g--npl~~aaa~a~l~~i~~-----~~l~~~~~~~g~~l~ 338 (443)
T PRK07483 273 AGYQPIGAVLASDRIYDA-I-ADGS-----GFFQHGHTYLG--HATACAAALAVQRVIAE-----DGLLANVRARGEQLR 338 (443)
T ss_pred cCccccEEEEEcHHHHHH-H-hcCC-----CccccCCCCCC--CHHHHHHHHHHHHHHHh-----cCHHHHHHHHHHHHH
Confidence 764 58888898887664 1 1100 00000011111 22223333344555543 456788888999999
Q ss_pred HHHHHH-cCCCcCCCcccccceEEEEcCCccccCC-----hhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCC
Q 012991 336 RMLANA-WGTSLGSPPEICAAMVMVGLPSRLRVMG-----EDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKD 409 (452)
Q Consensus 336 ~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~ 409 (452)
+.|.++ ....++......+.++.+.+.+...... ..-...+.+.+.++ |+.+........
T Consensus 339 ~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~~~~~~------------- 404 (443)
T PRK07483 339 ARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMAR-GLMVYPMGGTID------------- 404 (443)
T ss_pred HHHHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHC-CcEEEecCcccc-------------
Confidence 998764 2233333333345566665521100000 01235677777664 999853211000
Q ss_pred CCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 410 GIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 410 ~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
+..++.+|+.+....|++||+.++++|++.+.+
T Consensus 405 ~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~ 437 (443)
T PRK07483 405 GVRGDHVLLAPPFIITAAQIDEIVERLGDAIDA 437 (443)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 112468999999999999999999999999864
No 353
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.72 E-value=3.6e-15 Score=144.55 Aligned_cols=307 Identities=13% Similarity=0.122 Sum_probs=192.2
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|..++.+.+++.+.+......... ...+...++.++++++.+. +.+++++|||+|++.++.... .
T Consensus 37 ~lGh~~p~v~~ai~~ql~~~~~~~~~----~~~~~~~~la~~l~~~~~~---~~v~~~~SGseA~e~Alklar-~----- 103 (364)
T PRK04013 37 VLGHNHPEWVEEMSEQLEKLVVAGPM----FEHEEKEEMLEELSKWVNY---EYVYMGNSGTEAVEAALKFAR-L----- 103 (364)
T ss_pred cCCCCCHHHHHHHHHHHHhcCCccCC----cCCHHHHHHHHHHHhhcCC---CEEEEeCchHHHHHHHHHHHH-H-----
Confidence 45677777999999988764211111 1245567788889998865 589999999999999999652 2
Q ss_pred CCCCCEEEEeCCcchhHHHHHHHHHHh----cCc-----EEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEe
Q 012991 127 FHRNDTVLMLHCAFQAVKKSIQAYVTR----AGG-----SVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIID 197 (452)
Q Consensus 127 ~~~g~~Vl~~~~~~~s~~~~~~~~a~~----~g~-----~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~ 197 (452)
...+++|++.+.+|++.......+... .+. .+..+ +.++ .+.+++.+ .+++++|+++
T Consensus 104 ~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~----~~~d----~~~l~~~i------~~~~aAvivE 169 (364)
T PRK04013 104 YTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHI----PFND----VEAAKEAI------TKETAAVIFE 169 (364)
T ss_pred HhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEe----cCCC----HHHHHHHh------cCCcEEEEEc
Confidence 233479999999888864443211000 011 11222 1111 46778877 4689999999
Q ss_pred ccCCCCcccc-c---HHHHHHHHHHcCCCEEEEeccccc---CCc-cccccccCccEEEEcCcccCcCCCCcEEEEEecC
Q 012991 198 HITSMPCVVI-P---VRKLVKICRDEGVDQVFVDAAHAM---GSI-KIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKS 269 (452)
Q Consensus 198 ~~~n~tG~~~-~---l~~i~~l~~~~~~~~~ivD~a~~~---g~~-~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~ 269 (452)
......|... | +++|.++|++||+ ++|.|++++. |.. ..+.....+|+++++ |.+.|+..+|.++.+.+
T Consensus 170 pi~g~gG~~~~~~~yl~~lr~lc~~~gi-llI~DEv~tG~RtG~~~a~~~~gv~PDiv~~g--K~lggG~P~~a~~~~~~ 246 (364)
T PRK04013 170 PIQGEGGIVPAKEEFVKTLRDLTEDVGA-LLIADEVQSGLRTGKFLAIEHYKVEPDIVTMG--KGIGNGVPVSLTLTNFD 246 (364)
T ss_pred CCcCCCCCcCCCHHHHHHHHHHHHHcCC-EEEEechhhcCCCCchhHHHhcCCCCCEEEec--ccccCCceeEEEEeccc
Confidence 9888777765 4 8899999999999 8999999862 211 112223468988886 98876555777777665
Q ss_pred ccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCC
Q 012991 270 ILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSP 349 (452)
Q Consensus 270 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 349 (452)
+... .+ ..++ ..+..+..+..+.++.+.+ +.+.++.++. |.++.. ..+..
T Consensus 247 ~~~~----~~-----------~~T~--~gnp~~~aaa~a~l~~i~~-----~~l~~~~~~~-------l~~l~~-~~v~~ 296 (364)
T PRK04013 247 VERG----KH-----------GSTF--GGNPLACKAVAVTLRILRR-----ERLVEKAGEK-------FIEIKG-ERVVT 296 (364)
T ss_pred ccCC----Cc-----------CCCC--CcCHHHHHHHHHHHHHHHh-----ccHHHHHHHH-------HHHhcc-Cccee
Confidence 4211 01 0011 1122233333445555553 2344444432 222211 22223
Q ss_pred cccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHH
Q 012991 350 PEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDY 429 (452)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di 429 (452)
....+.++.+.+. . ....+.+.+.++ |+.+.. ...+.+|+.++...|++|+
T Consensus 297 vRG~Gl~~gve~~-------~-~~~~i~~~~~~~-Gll~~~--------------------~g~~vlr~~Ppl~it~~~i 347 (364)
T PRK04013 297 TRGRGLMIGIVLK-------K-PVGKYVEELQNR-GYLVHT--------------------AGQRVIRLLPPLIISKDTM 347 (364)
T ss_pred eeeCcEEEEEEeC-------C-cHHHHHHHHHhC-CcEEee--------------------CCCCEEEEeCCcccCHHHH
Confidence 3344666666663 1 245677777664 998842 1136899999998999999
Q ss_pred HHHHHHHHHHHhc
Q 012991 430 EKFRDAVILLVEE 442 (452)
Q Consensus 430 ~~l~~~l~~~~~~ 442 (452)
+.++++|++.+..
T Consensus 348 ~~~~~~l~~~l~~ 360 (364)
T PRK04013 348 EEAKSAIEGVIND 360 (364)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998864
No 354
>PRK07480 putative aminotransferase; Validated
Probab=99.71 E-value=1.2e-14 Score=145.51 Aligned_cols=351 Identities=12% Similarity=0.121 Sum_probs=206.2
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|...+.+.+++.+.+....... ..+ ....+...++.++|+++++.+ .+.++|++|||+|++.++.. +|.|....
T Consensus 63 ~lGh~~p~v~~Ai~~q~~~~~~~~-~~~-~~~~~~~~~lae~L~~~~p~~-~~~v~f~~SGseA~e~Alkl-Ar~~~~~~ 138 (456)
T PRK07480 63 NVGYGRKELADAAARQMRELPYYN-TFF-KTTHPPAIELAAKLAEVAPPG-FNHVFFTNSGSEANDTVLRM-VRHYWALK 138 (456)
T ss_pred cCCCCCHHHHHHHHHHHHhcCCcc-ccc-ccCCHHHHHHHHHHHHhCCCC-cCEEEEeCCcHHHHHHHHHH-HHHHHHhc
Confidence 356777889999999887531111 110 112455677888888887643 46999999999999999984 45442110
Q ss_pred CCC-CCEEEEeCCcchhHHHHHHHHH------HhcC---cEEEEEeCCCCC------C--ChHHH-HHHHHHHHhccccC
Q 012991 127 FHR-NDTVLMLHCAFQAVKKSIQAYV------TRAG---GSVVEVQLPFPL------A--SEEEI-INEFKKGIEKGKKD 187 (452)
Q Consensus 127 ~~~-g~~Vl~~~~~~~s~~~~~~~~a------~~~g---~~v~~~~~~~~~------~--~~~~~-~~~l~~~i~~~~~~ 187 (452)
-++ +.+|+....+|++.......+. ...+ ..+..++.++.. + +.... .+.+++.+... .
T Consensus 139 g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~ 216 (456)
T PRK07480 139 GKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILEL--G 216 (456)
T ss_pred CCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhc--C
Confidence 112 3578888888887543221110 0001 011222211100 0 01111 46666555321 1
Q ss_pred CCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEEEEcCcccCcCC
Q 012991 188 GKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLHKWFFCP 258 (452)
Q Consensus 188 ~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~l~g~ 258 (452)
.+++.+|+++......|.+.| +++|.++|++||+ ++|+|+++. +|-.. .+.....+|+++++ |.+.|+
T Consensus 217 ~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~-llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g--K~l~gG 293 (456)
T PRK07480 217 ADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDI-LLVADEVICGFGRTGEWFGSQHFGIKPDLMTIA--KGLTSG 293 (456)
T ss_pred CCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCC-EEEEechhhCCCcCcchhhhhhcCCCCCeeeee--hhhccC
Confidence 357899999998888888876 8899999999999 899999984 54332 22223458988776 988765
Q ss_pred C-CcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHH-HHHHHHHHH
Q 012991 259 P-SVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRN-HEQALKMAR 336 (452)
Q Consensus 259 ~-G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~-~~~~~~l~~ 336 (452)
. .+|.+++++++.+. +.... + ......++.| +..+..+..++++.+.+ +.+.++. +++.++|.+
T Consensus 294 ~~Pi~av~~~~~i~~~-~~~~~-----~-~~~~~~T~~g--npl~~Aaa~a~L~~l~~-----~~l~~~~~~~~g~~l~~ 359 (456)
T PRK07480 294 YIPMGAVGVGDRVAEV-LIEEG-----G-EFNHGFTYSG--HPVAAAVALANLRILRD-----EGIVERVRDDTGPYLQK 359 (456)
T ss_pred CccceEEEEcHHHHHH-HhcCC-----C-CcccCCCCCc--CHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHHH
Confidence 3 47888888887654 10000 0 0001111122 22233334445555543 3456677 477888888
Q ss_pred HHHHHcCCCcCCCcccccceEEEEcCCccccCCh-----hhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCC
Q 012991 337 MLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGE-----DDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGI 411 (452)
Q Consensus 337 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~ 411 (452)
.|.++....++......+.++.+.+-+....... .....+.+.+.++ ||.+..
T Consensus 360 ~l~~l~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~--------------------- 417 (456)
T PRK07480 360 RLRELADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFAN-GLIMRA--------------------- 417 (456)
T ss_pred HHHHhhcCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHHHHHHHHC-CcEEee---------------------
Confidence 8877533333333334466666655210000000 1124566677664 998842
Q ss_pred ccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 412 ITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 412 ~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
..+.+|+++....|++||+.++++|.+.+..
T Consensus 418 ~~~~l~~~Ppl~it~~eid~~~~~l~~al~~ 448 (456)
T PRK07480 418 VGDRMIISPPLVITHAEIDELVEKARKALDA 448 (456)
T ss_pred cCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 1257999999888999999999999999865
No 355
>PRK07482 hypothetical protein; Provisional
Probab=99.71 E-value=1.3e-14 Score=145.68 Aligned_cols=355 Identities=10% Similarity=0.045 Sum_probs=209.5
Q ss_pred CCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCC
Q 012991 48 FGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRF 127 (452)
Q Consensus 48 ~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~ 127 (452)
.|..++.|.+++.+.+.... +... +.....+...++.++|++.+..+ .+.++|++|||+|++.++. ++|.|....-
T Consensus 64 lGh~~p~v~~Av~~q~~~~~-~~~~-~~~~~~~~~~~lAe~L~~~~p~~-~~~v~f~~sGSEAve~AlK-lAr~~~~~~g 139 (461)
T PRK07482 64 VGYGRTEVAEAIAEQAKELA-YYHT-YVGHGTEASITLSKRIIDRAPAG-MSKVYYGLSGSDANETQIK-LVWYYNNVLG 139 (461)
T ss_pred CCCCCHHHHHHHHHHHHhcC-cccc-ccccCCHHHHHHHHHHHHhCCCC-cCEEEEeCchHHHHHHHHH-HHHHHHHhcC
Confidence 46777889999999887631 1111 11112455677888888887542 4689999999999999998 4454421111
Q ss_pred -CCCCEEEEeCCcchhHHHHHHHHHH------hcC---cEEEEEeCCCCCC------Ch---HH-HHHHHHHHHhccccC
Q 012991 128 -HRNDTVLMLHCAFQAVKKSIQAYVT------RAG---GSVVEVQLPFPLA------SE---EE-IINEFKKGIEKGKKD 187 (452)
Q Consensus 128 -~~g~~Vl~~~~~~~s~~~~~~~~a~------~~g---~~v~~~~~~~~~~------~~---~~-~~~~l~~~i~~~~~~ 187 (452)
..+.+|+....+||+.......+.. ..+ ..+..++.+.... .. .. ..+.+++.+.+. .
T Consensus 140 ~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~ 217 (461)
T PRK07482 140 RPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAE--G 217 (461)
T ss_pred CCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--C
Confidence 2246889888888885433211110 011 1122222211000 00 11 257777777421 1
Q ss_pred CCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEEEEcCcccCcCC
Q 012991 188 GKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLHKWFFCP 258 (452)
Q Consensus 188 ~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~l~g~ 258 (452)
.+++.+|+++......|.+.| +++|.++|++||+ ++|+|+++. +|-.. .+.....+|+++++ |.+.|+
T Consensus 218 ~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~gi-LlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG 294 (461)
T PRK07482 218 PDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDI-LLIADEVVTGFGRLGSMFGSDHYGIEPDLITVA--KGLTSA 294 (461)
T ss_pred CCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCC-EEEEeccccCCCcCcchhhHHhcCCCCCEEEEc--cccccC
Confidence 357899999988887788765 7789999999999 999999975 43321 12223468999986 988776
Q ss_pred C-CcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Q 012991 259 P-SVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARM 337 (452)
Q Consensus 259 ~-G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~ 337 (452)
. .+|.+++++++.+. + .... ...+......++ ..+..+..+..+.++.+.+ +.+.++.+++.+++.+.
T Consensus 295 ~~Pi~av~~~~~i~~~-~-~~~~--~~~~~~~h~~T~--~gnpl~~Aaa~a~L~~~~~-----~~l~~~~~~~g~~l~~~ 363 (461)
T PRK07482 295 YAPLSGSIVGEKVWDV-L-EQGS--DEHGAIGHGWTY--SGHPICAAAALANLDILER-----ENLVGNAAEVGAYFRAR 363 (461)
T ss_pred ccccceeeecHHHHHH-H-hccc--ccCCccccCCCC--CcCHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHHH
Confidence 4 57888888776553 1 1100 000000001111 1222223333344555543 34677788888888888
Q ss_pred HHHHc-CCCcCCCcccccceEEEEcCCccccCCh-----hhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCC
Q 012991 338 LANAW-GTSLGSPPEICAAMVMVGLPSRLRVMGE-----DDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGI 411 (452)
Q Consensus 338 L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~ 411 (452)
|.++. ...++......+.++.+.+.+....... .-...+...+.++ |+.+... .
T Consensus 364 L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~-Gvl~~~~-------------------~ 423 (461)
T PRK07482 364 LRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALER-GVIARAM-------------------P 423 (461)
T ss_pred HHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHC-CcEEecC-------------------C
Confidence 87652 2222222223456666666321000000 0135677788764 9987421 1
Q ss_pred ccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 412 ITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 412 ~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
.++.+|+.++...|++||+++++++.+.+++
T Consensus 424 ~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 454 (461)
T PRK07482 424 HGDILGFAPPLVLTRAEADEIVAIAKDAVDE 454 (461)
T ss_pred CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 1368999998888999999999999999865
No 356
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.71 E-value=1.6e-15 Score=149.28 Aligned_cols=311 Identities=15% Similarity=0.142 Sum_probs=209.2
Q ss_pred hhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcE
Q 012991 78 LRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGS 157 (452)
Q Consensus 78 ~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~ 157 (452)
+.....++++..|+.+|++ ...++++|+|.|+..+++++ +++||.|++++.+|.|+..++.. .|+.
T Consensus 68 p~G~i~eAqe~aA~~fgAd--~tyFvvNGTS~ank~vi~a~--------~~~GD~VLvdRN~HKSi~~glil----aGa~ 133 (557)
T COG1982 68 PEGPIKEAQELAARVFGAD--HTYFVVNGTSTANKAVINAV--------LTPGDKVLVDRNCHKSIHHGLIL----AGAT 133 (557)
T ss_pred CCccHHHHHHHHHHHhCCC--ceEEEECCccHHHHHHHHhh--------cCCCCEEEecCCccHHHHHHHHH----cCCc
Confidence 3456899999999999996 67888999999999999987 69999999999999999888644 5889
Q ss_pred EEEEeCCCCCCC----hHHH-HHHHHHHHhccccCCCce-EEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccc
Q 012991 158 VVEVQLPFPLAS----EEEI-INEFKKGIEKGKKDGKMI-RLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHA 231 (452)
Q Consensus 158 v~~~~~~~~~~~----~~~~-~~~l~~~i~~~~~~~~~~-~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~ 231 (452)
++++.+. .+. .+.+ .+.+++++.++ +.- ++++++++++ .|+.+++++|.+.++.+++ ++.+|.+|.
T Consensus 134 Pvyl~p~--~np~~gi~ggI~~~~~~~~l~~~----~~~~k~~vitnpTY-dGv~~n~~~i~~~~~~~~a-~v~~deah~ 205 (557)
T COG1982 134 PVYLEPS--RNPLYGIIGGIPLETFKEALLAH----PDAEKLAVITNPTY-DGVCYNLRKIVELLHHYGA-WVLYDEAHP 205 (557)
T ss_pred eEEecCC--CCccccccCCCCHHHHHHHHHhC----hhhheeEEEecCcc-ceEeecHHHHHHHHhhcCc-eEEhhhcCc
Confidence 9888652 222 2334 78888888653 344 8889988876 7999999999999999999 599999886
Q ss_pred cC-----CccccccccCccEEEEcCcccCcCCCCcEEEEEecC-ccccCCCCCceeccCCCCcccccccccccCcccccc
Q 012991 232 MG-----SIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKS-ILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLV 305 (452)
Q Consensus 232 ~g-----~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (452)
+- ..+....+.++|+++.|.||.+.+......+.++++ .+.. ..++. ......+++|++..+++
T Consensus 206 ~~~~~~~~l~~~~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~----~r~ne------a~~~h~STSPsY~l~AS 275 (557)
T COG1982 206 AHFDFSPMLPESALNGGADFVTQSTHKLLAALSQASMIHVKDGRAVNH----ERFNE------ALMMHQSTSPSYPLMAS 275 (557)
T ss_pred ccccccccCcchhhhcCceEEEechhhhhhhhhhhHHHhhCCCccCCH----HHHHH------HHHHHccCCchHHHHHH
Confidence 52 222222235789999999998877777788888764 2221 11100 01222346788877777
Q ss_pred HHHHHHHHHHhhcCHHHH---HHHHHHHHHHHHHHHHHHcCCCcCCCccc---cc----------------ceEEEEcCC
Q 012991 306 IPSAVTFVSRFEGGIDGI---MQRNHEQALKMARMLANAWGTSLGSPPEI---CA----------------AMVMVGLPS 363 (452)
Q Consensus 306 ~~~al~~~~~~~~g~~~~---~~~~~~~~~~l~~~L~~~~~~~~~~~~~~---~~----------------~~~~~~~~~ 363 (452)
+..|-.+... .|...+ .....+.++.+++...++.++.+..++.. .. .=+.+..|
T Consensus 276 lD~Ar~~~~~--~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp- 352 (557)
T COG1982 276 LDVARMQEGN--AGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTP- 352 (557)
T ss_pred HHHHHHhhhh--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecC-
Confidence 7664333332 244332 44556667777777777765655544420 00 01222232
Q ss_pred ccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhcc
Q 012991 364 RLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEEG 443 (452)
Q Consensus 364 ~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~~ 443 (452)
..+..+..+.+.|+++ ||...... .....+-+++....+..++++|+++++.+-...
T Consensus 353 ----~~Gipg~~v~~~L~e~-gii~e~~~------------------d~~~lll~~~~~gk~~~lv~~L~~f~r~~d~d~ 409 (557)
T COG1982 353 ----EFGIPGAIVAKYLREH-GIIPEETG------------------DYSNLLLFSPGIGKWQTLVDRLLEFKRRYDDDA 409 (557)
T ss_pred ----CCCCcHHHHHHHHHHc-CCeeeecC------------------CceeeEEeeeccchHHHHHHHHHHHHHhhhccc
Confidence 2477888999999775 88763211 112344455443456777888888888554443
Q ss_pred ccc
Q 012991 444 QVC 446 (452)
Q Consensus 444 ~~~ 446 (452)
...
T Consensus 410 ~l~ 412 (557)
T COG1982 410 PLK 412 (557)
T ss_pred hHh
Confidence 333
No 357
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.70 E-value=2.6e-14 Score=142.52 Aligned_cols=330 Identities=12% Similarity=0.130 Sum_probs=197.7
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|...+.|.+++.+.+..... . . ...+...++.+++++.+.. .+.+.|+++||+|++.++.. +|.+
T Consensus 66 ~lGh~~p~v~~ai~~q~~~~~~---~--~-~~~~~~~~la~~l~~~~p~--~~~v~f~~sGseA~e~Alkl-Ar~~---- 132 (428)
T PRK12389 66 ITGHAHPHITKAITEAAENGVL---Y--G-TPTELEIEFAKMLKEAIPS--LEKVRFVNSGTEAVMTTIRV-ARAY---- 132 (428)
T ss_pred ccCCCCHHHHHHHHHHHHhCCc---c--C-CCCHHHHHHHHHHHHhCCC--CcEEEEeCCHHHHHHHHHHH-HHHh----
Confidence 3567777799999988764311 1 1 1234457777788777652 46899999999999999984 4443
Q ss_pred CCCCCEEEEeCCcchhHHHHHHHHHHhc----------Cc------EEEEEeCCCCCCChHHHHHHHHHHHhccccCCCc
Q 012991 127 FHRNDTVLMLHCAFQAVKKSIQAYVTRA----------GG------SVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKM 190 (452)
Q Consensus 127 ~~~g~~Vl~~~~~~~s~~~~~~~~a~~~----------g~------~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~ 190 (452)
..+.+|+.....|++............ +. .+..+ +.++ .+.+++.+++. ..+
T Consensus 133 -tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~d----~~~l~~~l~~~---~~~ 200 (428)
T PRK12389 133 -TGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITV----PFND----IEALKEALDKW---GDE 200 (428)
T ss_pred -hCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEc----CCCC----HHHHHHHHHhc---CCc
Confidence 345789988888888654432211100 00 01111 1111 57777777543 357
Q ss_pred eEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccccCCccc----cccccCccEEEEcCcccCcCCCCcE
Q 012991 191 IRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHAMGSIKI----DVKEIGADFYVSNLHKWFFCPPSVA 262 (452)
Q Consensus 191 ~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~~g~~~~----~~~~~~~d~~~~s~~K~l~g~~G~G 262 (452)
+.+|+++......|.+.| +++|.++|++||+ ++|+|++++..-... ......+|+++++ |.+.|+..+|
T Consensus 201 vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~-llI~DEV~tG~Rt~~~~a~~~~gv~PDivt~g--K~lggG~Pi~ 277 (428)
T PRK12389 201 VAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGA-LVIYDEVITAFRFMYGGAQDLLGVEPDLTALG--KIIGGGLPIG 277 (428)
T ss_pred EEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCC-EEEEEccccccccCcchhhHHhCCCCCeeeec--hhhcCCCcee
Confidence 899999999988999888 8999999999999 899999987431111 1122358987665 9887655578
Q ss_pred EEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHc
Q 012991 263 FLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAW 342 (452)
Q Consensus 263 ~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~ 342 (452)
.+++++++.+. + .+. +. .....++ ..+.....+..+.++.+.+ +.+.++.+++.+++.+.|.++.
T Consensus 278 av~~~~~i~~~-~-~~~-----~~-~~~~~T~--~gnpl~~Aaala~L~~l~~-----~~l~~~~~~~g~~l~~~L~~l~ 342 (428)
T PRK12389 278 AYGGRKDIMEQ-V-APL-----GP-AYQAGTM--AGNPASMAAGIACLEVLQQ-----EGVYEKLDRLGAMLEEGILEAA 342 (428)
T ss_pred EEeEHHHHHhh-h-ccC-----CC-cccccCC--ccCHHHHHHHHHHHHHHhc-----ccHHHHHHHHHHHHHHHHHHHH
Confidence 88888887765 2 110 00 0000111 1222233334445555543 3467888999999999988752
Q ss_pred C-CCcCCCcccccceEEEEcCCcccc-------CChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccc
Q 012991 343 G-TSLGSPPEICAAMVMVGLPSRLRV-------MGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITG 414 (452)
Q Consensus 343 ~-~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (452)
. ..+........+++.+.+...... .+......+.+.|.++ ||.+.... .+
T Consensus 343 ~~~~~~~~v~r~~g~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~--------------------~~ 401 (428)
T PRK12389 343 EKHGITITINRLKGALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQ-GINLAPSK--------------------YE 401 (428)
T ss_pred HhCCCCEEEEecCcEEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHC-CcEeecCC--------------------CC
Confidence 1 111111101122333333210000 0011245677788764 99985321 12
Q ss_pred eEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 415 YARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 415 ~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
.+.++ ...|++||+++++++++.+++
T Consensus 402 ~~~~~--l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 402 AWFLT--TAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred Ceeec--CCCCHHHHHHHHHHHHHHHHh
Confidence 23443 445999999999999998853
No 358
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.69 E-value=6.6e-14 Score=140.28 Aligned_cols=345 Identities=13% Similarity=0.076 Sum_probs=203.1
Q ss_pred CCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCC-CcE-EEecChhHHHHHHHHHhhcccccC
Q 012991 48 FGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDV-GEI-SLVDNATTAAAIVLQQIGRGFTEG 125 (452)
Q Consensus 48 ~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-~~i-~~t~g~t~a~~~~~~~l~~~~~~~ 125 (452)
.|...+.+.+++.+.+........ .....+...++.+++++.++.... ..+ ++++|||+|++.++. ++|.+
T Consensus 72 lGH~~p~v~~Ai~~q~~~~~~~~~---~~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~Alk-lAr~~--- 144 (459)
T PRK06931 72 LGHNHPDVLQSIQDVLTSGLPLHT---LDLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIK-LAKTY--- 144 (459)
T ss_pred CCCCCHHHHHHHHHHHhhhccccc---cccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHH-HHHHh---
Confidence 467778899999988764211000 111245566778888888753211 134 555899999999998 44443
Q ss_pred CCCCCCEEEEeCCcchhHHHHHHHHHHhc---------CcEEEEEeCCCC----CC---ChHH--HHHHHHHHHhccccC
Q 012991 126 RFHRNDTVLMLHCAFQAVKKSIQAYVTRA---------GGSVVEVQLPFP----LA---SEEE--IINEFKKGIEKGKKD 187 (452)
Q Consensus 126 ~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~---------g~~v~~~~~~~~----~~---~~~~--~~~~l~~~i~~~~~~ 187 (452)
..+++|+.....|++.......+.... ...+..++.+.. .+ ++.. +.+.+++.+......
T Consensus 145 --tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (459)
T PRK06931 145 --TGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESG 222 (459)
T ss_pred --cCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcC
Confidence 445689999998888765543221110 012333332210 01 0011 123344444321112
Q ss_pred CCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEEEEcCcccCcCC
Q 012991 188 GKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLHKWFFCP 258 (452)
Q Consensus 188 ~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~l~g~ 258 (452)
.+++.+|+++......|.+.| ++++.++|++||+ ++|.|+++. +|-.. .+.....+|+++++ |.+.|+
T Consensus 223 ~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~-LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt~g--K~l~gG 299 (459)
T PRK06931 223 VRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGI-LLIVDEVQAGFARTGKMFAFEHAGIEPDIIVMS--KAVGGG 299 (459)
T ss_pred CCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCC-EEEEecchhcCCcCchHHHhhhcCCCCCEEEec--ccccCC
Confidence 356899999988888888765 7799999999999 999999975 43221 12223468999986 988776
Q ss_pred CCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHH
Q 012991 259 PSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARML 338 (452)
Q Consensus 259 ~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L 338 (452)
..+|.+..+++. +. + .+.. ...++.| +..+..+..+.++.+.+ +.+.++.+++.++|.+.|
T Consensus 300 ~Pi~av~~~~~~-~~-~-~~~~---------~~~T~~g--npla~aaala~L~~l~~-----~~l~~~~~~~G~~l~~~L 360 (459)
T PRK06931 300 LPLAVLGIKKEF-DA-W-QPGG---------HTGTFRG--NQLAMATGLTTLKILKE-----ENLAQNAAERGEWLKAQL 360 (459)
T ss_pred cceeeeeeHHHH-hh-c-cCCC---------CCCCCCC--CHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHHHH
Confidence 557877776653 32 1 1110 0111112 22223333344555443 346778888888888888
Q ss_pred HHHc-CCCcCCCcccccceEEEEcCCcccc-------C-ChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCC
Q 012991 339 ANAW-GTSLGSPPEICAAMVMVGLPSRLRV-------M-GEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKD 409 (452)
Q Consensus 339 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~ 409 (452)
.++. ...++......+.++.+.+.+.... . +..-...+...+.++ |+.+....
T Consensus 361 ~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~~----------------- 422 (459)
T PRK06931 361 AELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFEN-GLLLERGG----------------- 422 (459)
T ss_pred HHHHHhCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHC-CcEEeecC-----------------
Confidence 7762 2233333333466666665311000 0 011134566777664 99884211
Q ss_pred CCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 410 GIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 410 ~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
..++.+|+.++...|++||+.+++++.+.+..
T Consensus 423 -~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~ 454 (459)
T PRK06931 423 -RNGNVVRLLPPLLITQAECEEFIDRFEQALLA 454 (459)
T ss_pred -CCCCEEEEECCCCcCHHHHHHHHHHHHHHHHH
Confidence 12468999999989999999999999998864
No 359
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.69 E-value=1.2e-14 Score=140.55 Aligned_cols=364 Identities=20% Similarity=0.251 Sum_probs=194.1
Q ss_pred CCccccccCCCC---CCCCCHHHHHhhhccC---CC-CeEEeccCCCC-CCcHHHHHH-HHHHHHHHhc--CCch-hhhh
Q 012991 9 ELTHHVSKKPKL---TRCISEAEIRDEFSHH---QH-GVARINNGSFG-SCPKSVLAD-QQKWQLKFLQ--QPDD-FYFN 76 (452)
Q Consensus 9 ~~~~~~~~~~~~---~~~~~~~~ir~~~~~~---~~-~~~~l~~~~~~-~~p~~v~e~-~~~~~~~~~~--~~~~-~~~~ 76 (452)
+..|..++..++ ...++..++.+++..+ +. ..-++..|... ..|. +.+. +...-. |.+ .|-. -.+.
T Consensus 29 ~~IP~~i~~~~~~~lp~~~sE~e~~r~~~~la~kN~~~~~fiG~G~y~~~~P~-~i~~~i~~~~e-f~TaYtPYQpEisQ 106 (429)
T PF02347_consen 29 SDIPEEIRLKKPLNLPEPLSEYELLRHLERLASKNKSYTSFIGAGSYTHYVPA-VIDRNILSRPE-FYTAYTPYQPEISQ 106 (429)
T ss_dssp TTS-GGG-SS----------HHHHHHHHHHHHTTS--TTS---CTTT-----H-HHHH-HHCCHH-CCCS-STTSGGGBH
T ss_pred hhCCHhhcCCCCCCCCCCCCHHHHHHHHHHHHhcCCCCCccccccccCceeCh-hhcCccccChh-hhccCCCCCcHHHH
Confidence 345555543322 2347777777776531 11 23355555555 4444 4444 332221 111 1111 0134
Q ss_pred hhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCc
Q 012991 77 SLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGG 156 (452)
Q Consensus 77 ~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~ 156 (452)
+..+.+.+.+..++++.|.+ ..+.-+-.++|++-+.++.++... -+.+++|+++...|+.+...++-++...|+
T Consensus 107 G~Lq~lfe~Qs~i~eLTGmd-vaNaSlyd~atA~aEa~~ma~r~~-----~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~ 180 (429)
T PF02347_consen 107 GRLQALFEYQSMICELTGMD-VANASLYDGATAAAEAMLMAVRAT-----KRKRNKVLVPESLHPQTRAVLRTYAAPLGI 180 (429)
T ss_dssp HHHHHHHHHHHHHHHHHTSS-EE-SEBSSCCHHHHHHHHHHHHHH-----TT---EEEEETTS-CHHHHHHHHHCCHCCE
T ss_pred HHHHHHHHHHHHHHHhhCCC-ccCCCCCChhHHHHHHHHHHHHhc-----ccCCcEEEEcCCcChhhHHHHHHhhhhCCe
Confidence 55667889999999999996 445567778887777776655211 123569999999999988888777788899
Q ss_pred EEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEeccc--ccCC
Q 012991 157 SVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAH--AMGS 234 (452)
Q Consensus 157 ~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~--~~g~ 234 (452)
+++.++.. +.+. .+ ++++..|++++|++ .|.+.++++|.+++|++|. ++++ ++. +++.
T Consensus 181 ~iv~~~~~----~~~~-~d------------~~~~a~v~vq~Pn~-~G~~ed~~~i~~~~h~~ga-l~~~-~ad~~aL~~ 240 (429)
T PF02347_consen 181 EIVEVPLD----EDGT-TD------------DDDTAAVMVQNPNT-FGVFEDIKEIADIAHAAGA-LVIV-GADPNALGG 240 (429)
T ss_dssp EEEEE-BB----TTCS-B-------------STTEEEEEEESS-T-TSB--THHHHHHHHHHTT--EEEE-CGGCCGCCT
T ss_pred EEEEeccc----ccCC-cc------------ccCeEEEEeecCCC-CceEeeHHHHHHHHHHcCC-EEEE-ecCHHHHhC
Confidence 99998542 2110 11 37899999999986 7999999999999999999 7887 664 2333
Q ss_pred ccccccccCccEEEEcCcccCc-----CCCCcEEEEEecCccccCCCCCce-e--cc-CCCC-cc--cc------ccccc
Q 012991 235 IKIDVKEIGADFYVSNLHKWFF-----CPPSVAFLYCRKSILSSDMHHPVV-S--HE-FGNG-LP--IE------SAWIG 296 (452)
Q Consensus 235 ~~~~~~~~~~d~~~~s~~K~l~-----g~~G~G~l~~~~~~~~~~l~~~~~-~--~~-~~~~-~~--~~------~~~~~ 296 (452)
+ .....+|+|+++.+ +|.|+ |++|.|++.+++++..+ ++..+ . .+ .|.. +. .+ +..-.
T Consensus 241 l-~~Pge~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~--lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKA 316 (429)
T PF02347_consen 241 L-KSPGEYGADIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQ--LPGRIVGQTKDADGKRAFVLTLQTREQHIRREKA 316 (429)
T ss_dssp C---GGGGT-SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGG--S-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCS
T ss_pred c-CChhhcCccEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhh--CCCceecccccccccceeeeccccccccccccch
Confidence 2 23456699999665 77663 44558999999998886 33332 1 11 1211 10 00 01223
Q ss_pred ccCccccccH-----HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChh
Q 012991 297 TRDYSAQLVI-----PSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGED 371 (452)
Q Consensus 297 ~~~~~~~~~~-----~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (452)
+.++....++ ...+.++.. +|++++.+++..+++|+.+.|.+..+..+..+. .-.++....+ ..
T Consensus 317 tSNIctnqaL~A~~a~~Yl~~~G~--~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~~~--f~e~v~~~~~-------~~ 385 (429)
T PF02347_consen 317 TSNICTNQALLALAAAIYLAYLGP--EGLREIAERIHLNAHYLAERLKKIYGLPFDNPF--FFEFVVVFSK-------DK 385 (429)
T ss_dssp TT---SS-HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHCCTTBECSSSSS--BSSEEEEESS--------H
T ss_pred hhhhhhhHHHHHHHHHHHHHHhCH--HHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCC--ceeeeeecCC-------cH
Confidence 4444322222 223444443 389999999999999999999886344443322 1233333332 12
Q ss_pred hHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHH
Q 012991 372 DALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAV 436 (452)
Q Consensus 372 ~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 436 (452)
...++.+.... .|+..+ + ...+.+-+|+.-.+|.+|||++++++
T Consensus 386 ~~~~l~~~~~~-~gl~~~--~------------------~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 386 EVEELLKRGIE-GGLNLR--Y------------------PDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp HHHHHHHTT-----EEEG--G------------------G-SSEEEEE--TT--HHHHHHHHH--
T ss_pred HHHHHHHHHHh-cCCCcc--c------------------cCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 33345444433 354432 1 22348999999989999999999874
No 360
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.69 E-value=3.2e-14 Score=142.01 Aligned_cols=343 Identities=14% Similarity=0.119 Sum_probs=198.9
Q ss_pred CCCCCcHHHHH--HHHHHHHHHhc-CCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccc
Q 012991 47 SFGSCPKSVLA--DQQKWQLKFLQ-QPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFT 123 (452)
Q Consensus 47 ~~~~~p~~v~e--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~ 123 (452)
..|...+.|.+ ++.+.+..... .+... ....+...++.++|+++.+.++.+.+.|++||++|++.++. ++|+|+
T Consensus 58 ~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~--~~~~~~~~~la~~l~~~~~p~~~~~v~f~~SGsEAve~AlK-lAr~~~ 134 (443)
T PRK08297 58 ALGMNHPALADDPEFRAELGRAALNKPSNS--DVYTVEMARFVDTFARVLGDPELPHLFFVDGGALAVENALK-VAFDWK 134 (443)
T ss_pred cCCCCChHHhhHHHHHHHHHHhhhhccccC--CcCCHHHHHHHHHHHhhcCCCCCCEEEEeCchHHHHHHHHH-HHHHHh
Confidence 45677777999 98888765421 11111 11234456677777777632224699999999999999998 455552
Q ss_pred cC----CCC---CCCEEEEeCCcchhHHHHHHHHHHhcC-----cEE---EEEeCCC---CC-C-C---hH----HHHHH
Q 012991 124 EG----RFH---RNDTVLMLHCAFQAVKKSIQAYVTRAG-----GSV---VEVQLPF---PL-A-S---EE----EIINE 176 (452)
Q Consensus 124 ~~----~~~---~g~~Vl~~~~~~~s~~~~~~~~a~~~g-----~~v---~~~~~~~---~~-~-~---~~----~~~~~ 176 (452)
.. .-. .+.+|+....+|++.......+..... ... ..++.+. +. . + .. ..++.
T Consensus 135 ~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (443)
T PRK08297 135 SRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQ 214 (443)
T ss_pred hccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHH
Confidence 10 001 136899999998886544332211000 000 0011110 10 0 0 00 11566
Q ss_pred HHHHHhccccCCCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCccc----cccccCccEE
Q 012991 177 FKKGIEKGKKDGKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIKI----DVKEIGADFY 247 (452)
Q Consensus 177 l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~~----~~~~~~~d~~ 247 (452)
+++.+.+. .+++.+|+++......|.+.| +++|.++|++||+ ++|+|+++. +|-... +.....+|++
T Consensus 215 ~~~~i~~~---~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~-llI~DEV~tGfGRtG~~~a~~~~gv~PDiv 290 (443)
T PRK08297 215 ARAAFERH---PHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDA-LLIFDEVQTGVGLTGTAWAYQQLGVRPDIV 290 (443)
T ss_pred HHHHHHhC---CCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCC-EEEEechhhccCccchHHHHHhcCCCCCEE
Confidence 77777542 468999999988888888754 7899999999999 899999985 444321 1223368999
Q ss_pred EEcCcccCcCCCCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHH
Q 012991 248 VSNLHKWFFCPPSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRN 327 (452)
Q Consensus 248 ~~s~~K~l~g~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~ 327 (452)
+++ |.+ |. .|++ ..+++.+. ....+. ... ....++ ..+..+..+..++++.+.+ +.+.+++
T Consensus 291 ~~g--K~l--~~-~a~l-~~~~i~~~--~~~~~~---~~~-~~~~T~--~gnpl~~aaa~a~L~~l~~-----~~l~~~~ 351 (443)
T PRK08297 291 AFG--KKT--QV-CGIM-AGRRVDEV--EDNVFA---VSS-RINSTW--GGNLVDMVRARRILEVIEE-----DGLVENA 351 (443)
T ss_pred Eec--ccc--cc-ccee-cchHHHHh--hhhhcc---Ccc-ccCCCC--CccHHHHHHHHHHHHHHHh-----cCHHHHH
Confidence 864 975 32 2444 43332211 000000 000 000111 1122222333334444442 4567788
Q ss_pred HHHHHHHHHHHHHHcC-CCcCC-CcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCC
Q 012991 328 HEQALKMARMLANAWG-TSLGS-PPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGA 405 (452)
Q Consensus 328 ~~~~~~l~~~L~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~ 405 (452)
+++.+++.+.|.++.. ..... .....+.++.+.++ +......+.+.|.+ .||.+...
T Consensus 352 ~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~~~i~~~------~~~~~~~~~~~l~~-~Gvl~~~~-------------- 410 (443)
T PRK08297 352 ARQGEYLLARLEELAAEFPAVVSNVRGRGLMCAFDLP------TTADRDEVIRRLWE-EGVLVLPC-------------- 410 (443)
T ss_pred HHHHHHHHHHHHHHHHHCCCcceeeeccceEEEEEec------CHHHHHHHHHHHHH-CCEEEecC--------------
Confidence 8888888888877521 22111 22233667777764 22335678888876 49998421
Q ss_pred CCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 406 RDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 406 ~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
..+.+|++++...|++|++.++++|.+.+++
T Consensus 411 ------~~~~lr~~P~l~~t~~eid~~l~~l~~~l~~ 441 (443)
T PRK08297 411 ------GERSIRFRPALTVTTEEIDAAIDALRRALPE 441 (443)
T ss_pred ------CCCeEEEECCccCCHHHHHHHHHHHHHHHHh
Confidence 1257999998888999999999999998854
No 361
>PRK07046 aminotransferase; Validated
Probab=99.69 E-value=3.9e-14 Score=141.54 Aligned_cols=327 Identities=14% Similarity=0.104 Sum_probs=197.1
Q ss_pred CCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCC
Q 012991 48 FGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRF 127 (452)
Q Consensus 48 ~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~ 127 (452)
.|...+.+.+++.+.+..... + ....+...++.+.|++.++. +.+.|++|||+|++.++.. +|.+
T Consensus 89 lGh~~p~i~~Av~~q~~~~~~-----~-~~~~~~~~~lAe~l~~~~~~---~~v~F~nSGtEA~e~Alrl-AR~~----- 153 (453)
T PRK07046 89 FGHSPAPVARALAEQARRGLT-----T-MLPSEDAAWVGEELARRFGL---PYWQVATTATDANRFVLRW-ARAV----- 153 (453)
T ss_pred cCCCCHHHHHHHHHHHHhCCC-----C-CCCCHHHHHHHHHHHHHhCC---CEEEEECCHHHHHHHHHHH-HHHh-----
Confidence 456777799999988764211 1 11245567788888888754 6899999999999999984 4444
Q ss_pred CCCCEEEEeCCcchhHHHHHHHHHHhc----------Cc------EEEEEeCCCCCCChHHHHHHHHHHHhccccCCCce
Q 012991 128 HRNDTVLMLHCAFQAVKKSIQAYVTRA----------GG------SVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMI 191 (452)
Q Consensus 128 ~~g~~Vl~~~~~~~s~~~~~~~~a~~~----------g~------~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~ 191 (452)
..+++|+.....|++....... +... |. .+..+ +.++ ++.+++.+. ..++
T Consensus 154 TGr~~ii~~~g~YHG~~d~~l~-~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~nd----~~~l~~~l~-----~~~v 219 (453)
T PRK07046 154 TGRPKILVFNGCYHGTVDDVFV-DLVDGRPVQRPGLLGQVHDLTATTRVV----EFND----LAALEAALA-----DGDV 219 (453)
T ss_pred hCCCEEEEECCCCCCCcHHhHh-hccCCCCCCCCCCCCCCccccCceEee----CCCC----HHHHHHHhC-----CCCe
Confidence 4467899988888885432221 1001 10 01111 2222 678888774 3578
Q ss_pred EEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc----cCCccccccccCccEEEEcCcccCcCCCCcEE
Q 012991 192 RLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA----MGSIKIDVKEIGADFYVSNLHKWFFCPPSVAF 263 (452)
Q Consensus 192 ~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~----~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~ 263 (452)
.+|+++......|.+.| ++++.++|++||+ ++|+|++++ .|... ......+|+++++ |.+.|+..+|.
T Consensus 220 Aavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~-llI~DEV~tfr~g~Gg~~-~~~gv~PDi~t~g--K~lggG~Pi~a 295 (453)
T PRK07046 220 AAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGT-LLVIDETHTISSGPGGYT-RAHGLEPDFLVVG--KPIAGGVPCAV 295 (453)
T ss_pred EEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCC-EEEEEccccCccCCcchh-HHhCCCccceeeh--hhhcCCCccee
Confidence 99999988888888876 7899999999999 999999985 33221 1123458998764 98887666899
Q ss_pred EEEecCccccCCCCCceeccCCCCcccccccccc--cCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHH
Q 012991 264 LYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGT--RDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANA 341 (452)
Q Consensus 264 l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 341 (452)
+.+++++.+. + .+......... ....+| .+.....+..+.++.+.+ +.+.++.+++.++|.+.|.++
T Consensus 296 v~g~~~i~~~-~-~~~~~~~~~~~----~~~~~T~~gnpl~~aa~~a~L~~l~~-----~~~~~~~~~~g~~l~~~L~~l 364 (453)
T PRK07046 296 YGFSAELAER-A-QAAKASAPPGH----SGIGTTLSANALAMAAMRATLAEVMT-----EAAYAHMLALAARLAAGLRAV 364 (453)
T ss_pred eeehHHHHHH-H-hhccccCCCCC----ceeCCCCcccHHHHHHHHHHHHHHhc-----ccHHHHHHHHHHHHHHHHHHH
Confidence 8898887764 2 11100000000 001122 122223333334444432 345778888888888888764
Q ss_pred c-CCCcCCCcccccceEEEEcCCc--ccc------CChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCc
Q 012991 342 W-GTSLGSPPEICAAMVMVGLPSR--LRV------MGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGII 412 (452)
Q Consensus 342 ~-~~~~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~ 412 (452)
. ...+.......+.++.+.+.+. ... .+..-...+...+.++ ||.+.. .
T Consensus 365 ~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gv~~~~---------------------~ 422 (453)
T PRK07046 365 IARHGLPWHVTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNR-GVLITP---------------------F 422 (453)
T ss_pred HHhCCCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHC-CCEEec---------------------c
Confidence 2 1222111112233444433110 000 0011123466666564 998742 1
Q ss_pred cceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 413 TGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 413 ~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
.+.+++++. +|++||+.+++++.+.+++
T Consensus 423 ~~~~~~~p~--~t~~did~~~~~~~~~l~~ 450 (453)
T PRK07046 423 HNMMLVCPA--TTAADVDRLVAAFDACLGE 450 (453)
T ss_pred cCcEEEeCC--CCHHHHHHHHHHHHHHHHH
Confidence 246788876 5999999999999998854
No 362
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=99.68 E-value=2.5e-14 Score=134.88 Aligned_cols=330 Identities=14% Similarity=0.107 Sum_probs=212.0
Q ss_pred hhhhHHHHHHHHHHHhHhCCCC--------CCcEEEecChhHHHHHHHHHhhcc-ccc-----CCCCCC----C-EEEEe
Q 012991 76 NSLRKGILESRAAVKDLINADD--------VGEISLVDNATTAAAIVLQQIGRG-FTE-----GRFHRN----D-TVLML 136 (452)
Q Consensus 76 ~~~~~~~~~~~~~la~~~~~~~--------~~~i~~t~g~t~a~~~~~~~l~~~-~~~-----~~~~~g----~-~Vl~~ 136 (452)
+..+++..-.-+++++++++|+ ...-++..++++++..++.+.... +.+ ..+... + .+..+
T Consensus 109 Pa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~S 188 (511)
T KOG0628|consen 109 PACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYCS 188 (511)
T ss_pred cchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEec
Confidence 4456677778899999998762 234466677778888777765322 111 111111 1 34457
Q ss_pred CCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHH
Q 012991 137 HCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKI 215 (452)
Q Consensus 137 ~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l 215 (452)
+.+|.|+.++. -..|++++.++ .+....+ .+.|+++|+++...+--|.+|+.+-.++.+..+.++.+|..+
T Consensus 189 Dqahssveka~----~i~~VklR~l~----td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~V 260 (511)
T KOG0628|consen 189 DQAHSSVEKAC----LIAGVKLRALP----TDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPV 260 (511)
T ss_pred CcccchHHHhH----hhcceeEEEee----cccCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcch
Confidence 88999987653 44688999995 3444444 788888888765546678899999999989999999999999
Q ss_pred HHHcCCCEEEEecccccCCcc---cc--ccc-cCccEEEEcCcccCcCCCCcEEEEEecCcccc-CC--CCCceeccCCC
Q 012991 216 CRDEGVDQVFVDAAHAMGSIK---ID--VKE-IGADFYVSNLHKWFFCPPSVAFLYCRKSILSS-DM--HHPVVSHEFGN 286 (452)
Q Consensus 216 ~~~~~~~~~ivD~a~~~g~~~---~~--~~~-~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~-~l--~~~~~~~~~~~ 286 (452)
|+++|+ ++|||+|++....- +. ++. -.+|.+.+..|||+..=--+..+|+++..... .+ .+-++.+.+..
T Consensus 261 c~~~gl-WLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~ 339 (511)
T KOG0628|consen 261 CREEGL-WLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQG 339 (511)
T ss_pred hhhcCE-EEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcchhhc
Confidence 999999 59999998754321 11 111 13799999999997654446778887763321 00 11112111111
Q ss_pred CcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHH---HHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCC
Q 012991 287 GLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNH---EQALKMARMLANAWGTSLGSPPEICAAMVMVGLPS 363 (452)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~---~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (452)
. ..+......|-...+.++..++.... + |.++++++++ ++++.+.+.+.+-+.+++..+.. -+.++|++..
T Consensus 340 ~-~~Dyrhwqipl~rRfRSLKlWfv~R~-~--Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~--lgLvcFRlk~ 413 (511)
T KOG0628|consen 340 S-APDYRHWQIPLGRRFRSLKLWFVLRS-Y--GVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRI--LGLVCFRLKG 413 (511)
T ss_pred c-CCCccccccccccchhhHHHHHHHHH-H--hHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecccc--cceeEEeecC
Confidence 1 11222223344445555555444333 2 5555555544 55566666666666788888766 7799999973
Q ss_pred ccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEeccc-ccCCHHHHHHHHHHHHHHHhc
Q 012991 364 RLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQ-VYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 364 ~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~-~~~t~~di~~l~~~l~~~~~~ 442 (452)
++...+.+...+.....|.+.+... .+.-.||++++ ..++.+||+...+.|.+..+.
T Consensus 414 -----~N~~ne~Ll~~in~~g~i~l~~~~l-----------------~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~ 471 (511)
T KOG0628|consen 414 -----DNEINEALLNRLNSSGRIHLVPASL-----------------HGKFVLRFAVCSPLTNESDIDEAWKIIFEAADE 471 (511)
T ss_pred -----CcHHHHHHHHHHHhcCcEEEEEeee-----------------cceEEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Confidence 2334567888888777787754332 33468999986 456788899999999888765
No 363
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.67 E-value=1.6e-14 Score=134.07 Aligned_cols=344 Identities=14% Similarity=0.124 Sum_probs=207.0
Q ss_pred HHHHhhhccC-CCCeEEeccC------CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh-CCC--
Q 012991 27 AEIRDEFSHH-QHGVARINNG------SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI-NAD-- 96 (452)
Q Consensus 27 ~~ir~~~~~~-~~~~~~l~~~------~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~-~~~-- 96 (452)
-.+.+.|... .+..|+|..| +-.+.-++|.++-+...... .. -.|-+-++.....+.+.+++ |.+
T Consensus 14 lgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~----~~-k~Yl~i~G~~~f~~~~~~llFG~d~~ 88 (396)
T COG1448 14 LGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQE----KT-KNYLPIEGLPEFLEAVQKLLFGADSP 88 (396)
T ss_pred hHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccc----cc-cccCCcCCcHHHHHHHHHHhcCCCcH
Confidence 3444555432 2334455443 33344455666655544332 11 12334556677777777754 432
Q ss_pred --CCCcE--EEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHH
Q 012991 97 --DVGEI--SLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEE 172 (452)
Q Consensus 97 --~~~~i--~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 172 (452)
..+.+ +.|.|||.|+.+++.-+.+ +.+...|.+++|+|+.+...+ +..|.++...+.-+.. ....
T Consensus 89 ~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~------~~~~~~vwis~PtW~NH~~If----~~aGl~v~~Y~Yyd~~-~~~~ 157 (396)
T COG1448 89 ALAEDRVATVQTLGGTGALRVAADFLAR------FFPDATVWISDPTWPNHKAIF----EAAGLEVETYPYYDAE-TKGL 157 (396)
T ss_pred HHHhhhHhheecCCcchHHHHHHHHHHH------hCCCceEEeCCCCcHhHHHHH----HhcCCceeeeeccccc-cccc
Confidence 12233 6789999999999998753 567778999999999876665 4469999999764321 1222
Q ss_pred HHHHHHHHHhccccCCCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEeccc-ccCCccccccc-------
Q 012991 173 IINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAH-AMGSIKIDVKE------- 241 (452)
Q Consensus 173 ~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~-~~g~~~~~~~~------- 241 (452)
..+.+.+.+++. ..+.-+++...++||||.-.. +++|+++.++.+. +.++|-|+ +++.- ++-+.
T Consensus 158 df~~mla~L~~a---~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~l-ip~~D~AYQGF~~G-leeDa~~lR~~a 232 (396)
T COG1448 158 DFDGMLADLKTA---PEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGL-IPFFDIAYQGFADG-LEEDAYALRLFA 232 (396)
T ss_pred cHHHHHHHHHhC---CCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCC-eeeeehhhhhhccc-hHHHHHHHHHHH
Confidence 266666667654 345567788889999999765 5578999999999 89999775 33321 22111
Q ss_pred -cCc-cEEEEcCcccCcCCCC--cEEEEEe-c--CccccCCCCCceeccCCCCcccccccccccCccccccHHHHHH---
Q 012991 242 -IGA-DFYVSNLHKWFFCPPS--VAFLYCR-K--SILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVT--- 311 (452)
Q Consensus 242 -~~~-d~~~~s~~K~l~g~~G--~G~l~~~-~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~--- 311 (452)
.+. -+++.|++|. +|.+| +|++.+- . +.... .....- ..-+...++|+..........|.
T Consensus 233 ~~~~~~lva~S~SKn-fgLYgERVGa~~vva~~~~~a~~-v~sqlk--------~~iR~~ySnPP~~Ga~vva~IL~~p~ 302 (396)
T COG1448 233 EVGPELLVASSFSKN-FGLYGERVGALSVVAEDAEEADR-VLSQLK--------AIIRTNYSNPPAHGAAVVATILNNPE 302 (396)
T ss_pred HhCCcEEEEehhhhh-hhhhhhccceeEEEeCCHHHHHH-HHHHHH--------HHHHhccCCCchhhHHHHHHHhCCHH
Confidence 122 5788899995 88888 6655442 1 22211 000000 00111123344333333222221
Q ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHc---CCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEe
Q 012991 312 FVSRFEGGIDGIMQRNHEQALKMARMLANAW---GTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEV 388 (452)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v 388 (452)
.-..|+..++.+++|+.++++.|.+.|.+.. .+.....+ .+++.+ .+.+.+++ +.|++++||++
T Consensus 303 Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q---~GMFsy---------~Gls~~QV-~rLree~~IY~ 369 (396)
T COG1448 303 LRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFIISQ---RGMFSY---------TGLSPEQV-DRLREEFGIYL 369 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhhc---Cceeec---------CCCCHHHH-HHHHHhccEEE
Confidence 1112223578999999999999999998842 13333222 345443 36788777 55567899998
Q ss_pred eecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHH
Q 012991 389 PIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILL 439 (452)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~ 439 (452)
.. .| |||++.. +...|+.+++++.++
T Consensus 370 v~----------------------sG--Ri~vaGl-~~~ni~~va~ai~~v 395 (396)
T COG1448 370 VA----------------------SG--RINVAGL-NTSNIDYVAKAIAAV 395 (396)
T ss_pred ec----------------------CC--eeeeccC-ChhhHHHHHHHHHhh
Confidence 41 12 9999875 577799999998765
No 364
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.67 E-value=7.9e-14 Score=139.59 Aligned_cols=323 Identities=16% Similarity=0.137 Sum_probs=194.0
Q ss_pred CCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCC
Q 012991 48 FGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRF 127 (452)
Q Consensus 48 ~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~ 127 (452)
.|..++.|.+++.+.+.... . +. ...+...++-++|++.+.. .+.+.|+++||+|++.++. ++|.+
T Consensus 113 lGh~~p~v~~av~~ql~~~~----~-~~-~~~~~~~~lAe~l~~~~p~--~~~v~f~~SGsEA~e~Alk-lAR~~----- 178 (474)
T PLN02482 113 IGHADDEVLAALAETMKKGT----S-FG-APCLLENVLAEMVIDAVPS--VEMVRFVNSGTEACMGVLR-LARAY----- 178 (474)
T ss_pred cCCCCHHHHHHHHHHHhhCC----C-CC-CCCHHHHHHHHHHHHhCCC--CCEEEEeCChHHHHHHHHH-HHHHh-----
Confidence 46777889999999886531 1 11 1234556777788887753 4799999999999999998 45544
Q ss_pred CCCCEEEEeCCcchhHHHHHHHHHHh----------cCc------EEEEEeCCCCCCChHHHHHHHHHHHhccccCCCce
Q 012991 128 HRNDTVLMLHCAFQAVKKSIQAYVTR----------AGG------SVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMI 191 (452)
Q Consensus 128 ~~g~~Vl~~~~~~~s~~~~~~~~a~~----------~g~------~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~ 191 (452)
..+.+|+.....|++....+...+.. .|. .+..+ +.++ ++.+++.+++. .+++
T Consensus 179 tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~nd----~~~l~~~l~~~---~~~i 247 (474)
T PLN02482 179 TGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTA----PYND----LEAVKKLFEAN---KGEI 247 (474)
T ss_pred cCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEe----cCCC----hHHHHHHHHhC---CCce
Confidence 34568998888888854332111000 000 01111 2221 57788777542 4678
Q ss_pred EEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccccCCc-c----ccccccCccEEEEcCcccCcCCCCcE
Q 012991 192 RLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHAMGSI-K----IDVKEIGADFYVSNLHKWFFCPPSVA 262 (452)
Q Consensus 192 ~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~~g~~-~----~~~~~~~~d~~~~s~~K~l~g~~G~G 262 (452)
++|+++......|.+.| +++|.++|++||+ ++|+|+++. |.. . .......+|++++ .|.+.|+..+|
T Consensus 248 AavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~-lLI~DEV~t-GfR~g~~ga~~~~gv~PDi~t~--gK~lggG~Pig 323 (474)
T PLN02482 248 AAVILEPVVGNSGFIVPKKEFLEGLREITKENGA-LLVFDEVMT-GFRIAYGGAQEYFGITPDLTTL--GKVIGGGLPVG 323 (474)
T ss_pred EEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCC-EEEEecccc-CeecCcchHhHHhCCCCCEEEe--cchhhCCCceE
Confidence 99999999988998877 5589999999999 899999985 321 0 0112235888766 59887655578
Q ss_pred EEEEecCccccCCCCCceeccCCCCcccccccccc--cCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHH
Q 012991 263 FLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGT--RDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLAN 340 (452)
Q Consensus 263 ~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~ 340 (452)
.+..++++.+. + .+. ... ...+| .+.....+..++++.+.+ +.+.+++.++.++|++.|.+
T Consensus 324 av~g~~ei~~~-~-~~~------~~~----~~~~T~~gnpl~~aAala~L~~l~~-----~~~~~~~~~~g~~l~~~L~~ 386 (474)
T PLN02482 324 AYGGRREIMEM-V-APA------GPM----YQAGTLSGNPLAMTAGIHTLKRLQQ-----PGTYEYLDKITKKLIQGILE 386 (474)
T ss_pred EEEEcHHHHHh-h-ccC------CCc----ccccCcchhHHHHHHHHHHHHHHhc-----cCHHHHHHHHHHHHHHHHHH
Confidence 88888888775 2 110 000 00122 122223333344555542 34678888899999999887
Q ss_pred Hc---CCCcCCCcccccceEEEEcCC--ccc-----cCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCC
Q 012991 341 AW---GTSLGSPPEICAAMVMVGLPS--RLR-----VMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDG 410 (452)
Q Consensus 341 ~~---~~~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~ 410 (452)
+. +..+... ...+++.+.+.. ... ..+......+...|.++ ||++......
T Consensus 387 l~~~~g~~~~~~--~v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~-Gv~~~~~~~~---------------- 447 (474)
T PLN02482 387 AGKKAGHEMCGG--YISGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEE-GVYLAPSQFE---------------- 447 (474)
T ss_pred HHHhcCCCEEEc--ccceEEEEEEecCCccChhhhccCCHHHHHHHHHHHHHC-CeEEeccCCC----------------
Confidence 62 1222111 112233332211 000 00111234677777664 9998532110
Q ss_pred CccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 411 IITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 411 ~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
.+ .++..+|++||+++++++++++.
T Consensus 448 --~~----~psl~ht~~dId~~l~al~~~l~ 472 (474)
T PLN02482 448 --AG----FTSLAHTEEDIDFTIAAAERVLA 472 (474)
T ss_pred --CC----cCCCCCCHHHHHHHHHHHHHHHH
Confidence 01 14455699999999999999875
No 365
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.66 E-value=8.4e-14 Score=138.23 Aligned_cols=331 Identities=13% Similarity=0.152 Sum_probs=195.5
Q ss_pred CCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCC
Q 012991 48 FGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRF 127 (452)
Q Consensus 48 ~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~ 127 (452)
.|...+.+.+++.+.+.... . + ....+...++-++|.+.++.. .+.+.|+++||+|++.++. ++|.+
T Consensus 67 lGh~~p~v~~ai~~q~~~~~----~-~-~~~~~~~~~la~~L~~~~~~~-~~~v~f~~SGsEA~e~Aik-lAr~~----- 133 (433)
T PRK00615 67 HGHSHPKICDAIQQGAERGT----S-Y-GLTSEQEILFAEELFSYLGLE-DHKIRFVSSGTEATMTAVR-LARGI----- 133 (433)
T ss_pred cCCCCHHHHHHHHHHHHhCC----C-C-CCCCHHHHHHHHHHHHhCCCC-cCEEEEeCchHHHHHHHHH-HHHHh-----
Confidence 46777889999988876531 1 1 112345677788888887643 3699999999999999998 44443
Q ss_pred CCCCEEEEeCCcchhHHHH-HHHHHHhcCcE---E-EEE--eCC------CCCCChHHHHHHHHHHHhccccCCCceEEE
Q 012991 128 HRNDTVLMLHCAFQAVKKS-IQAYVTRAGGS---V-VEV--QLP------FPLASEEEIINEFKKGIEKGKKDGKMIRLA 194 (452)
Q Consensus 128 ~~g~~Vl~~~~~~~s~~~~-~~~~a~~~g~~---v-~~~--~~~------~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv 194 (452)
..+.+|+....+|++.... +..+ ...+.. . ... +.. .+.++ .+.+++.+++. ..++++|
T Consensus 134 tgr~~ii~~~~~yHG~td~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d----~~~l~~~l~~~---~~~~aav 205 (433)
T PRK00615 134 TGRSIIIKFLGCYHGHADTLLQGI-SFSETSLDTLTHLVDTDLAHPLTLSLPYND----FQIFQTVMNSL---GHRVAGV 205 (433)
T ss_pred hCCCEEEEEcCccCCCCcccCccc-ccCCCCcCcCCCCCCCCCCCCCeEeCCCCC----HHHHHHHHHhc---CCceEEE
Confidence 3456888888888874311 1100 000100 0 000 000 01111 57778777543 3578899
Q ss_pred EEeccCCCCcccccH----HHHHHHHHHcCCCEEEEecccccCC-cc----ccccccCccEEEEcCcccCcCCCCcEEEE
Q 012991 195 IIDHITSMPCVVIPV----RKLVKICRDEGVDQVFVDAAHAMGS-IK----IDVKEIGADFYVSNLHKWFFCPPSVAFLY 265 (452)
Q Consensus 195 ~~~~~~n~tG~~~~l----~~i~~l~~~~~~~~~ivD~a~~~g~-~~----~~~~~~~~d~~~~s~~K~l~g~~G~G~l~ 265 (452)
+++....+.|.+.|. ++|.++|++||+ ++|+|+++. |. .. .......+|++++ +|.+.|+..+|+++
T Consensus 206 I~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~-llI~DEv~t-G~R~G~~ga~~~~gv~PDi~~~--gK~lggG~p~~av~ 281 (433)
T PRK00615 206 IFEPICANMGVVLPKPGFIEGIIQTCRRTGS-LSIMDEVVT-GFRVAQGGAAAIYHVKPDITVY--GKILGGGLPAAAVV 281 (433)
T ss_pred EECCCCCCCCcccCCHHHHHHHHHHHHHcCC-EEEEEcccc-cccccHhHHHHhcCCCCCeEEE--cccccCCcceeeee
Confidence 999999988998874 599999999999 899999984 32 11 1122336888875 59887544368888
Q ss_pred EecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHc---
Q 012991 266 CRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAW--- 342 (452)
Q Consensus 266 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~--- 342 (452)
+++++.+. + .+. + ......+ ...+.....+..++++.+.+ +.++++++++.+++.+.|++..
T Consensus 282 ~~~~i~~~-~-~~~-----~-~~~~~~T--~~g~p~~~aa~la~L~~i~~-----~~~~~~~~~~g~~l~~~l~~~~~~~ 346 (433)
T PRK00615 282 AHKSIMDH-L-APE-----G-TIFQAGT--LSGNPLAMAAGKASINLCRE-----QGFYTQLSTLEQNFLSPIEEMIRSQ 346 (433)
T ss_pred ecHHHHhh-h-cCC-----C-CcccCCC--CcccHHHHHHHHHHHHHHhc-----ccHHHHHHHHHHHHHHHHHHHHHHc
Confidence 88888775 2 110 0 0000001 11222233444445555543 3357778888888877776531
Q ss_pred CCCcCCCcccccceEEEEcCCcc--cc-----CChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccce
Q 012991 343 GTSLGSPPEICAAMVMVGLPSRL--RV-----MGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGY 415 (452)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (452)
++.+.. .. .+.++.+.+.+.. .. .+......+...|.++ ||++..... +.
T Consensus 347 g~~v~~-~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~--------------------~~ 403 (433)
T PRK00615 347 GFPVSL-VR-YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSK-GVYLSPSPF--------------------EA 403 (433)
T ss_pred CCCeEE-Ee-eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHC-CeeecCccc--------------------cc
Confidence 233211 11 2455555553110 00 0111234677888664 999853211 11
Q ss_pred EEecccccCCHHHHHHHHHHHHHHHhcc
Q 012991 416 ARISHQVYNTLEDYEKFRDAVILLVEEG 443 (452)
Q Consensus 416 iRis~~~~~t~~di~~l~~~l~~~~~~~ 443 (452)
..++..+|++||+++++++.++++.-
T Consensus 404 --~~ls~~ht~~did~~~~a~~~~~~~~ 429 (433)
T PRK00615 404 --SFLSSAHSMENLDYAQNVLIDSLEKV 429 (433)
T ss_pred --cceecCCCHHHHHHHHHHHHHHHHHH
Confidence 13344459999999999999998764
No 366
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.65 E-value=1e-14 Score=136.01 Aligned_cols=337 Identities=14% Similarity=0.080 Sum_probs=204.5
Q ss_pred hhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccC-----C-CCCCCEEEEeCCcchhHHHHHHHH
Q 012991 77 SLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEG-----R-FHRNDTVLMLHCAFQAVKKSIQAY 150 (452)
Q Consensus 77 ~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~-----~-~~~g~~Vl~~~~~~~s~~~~~~~~ 150 (452)
.+.-...++-....+..|-+....-+|++||+-++..+..+..-+.... . .-|.-.+.+++.+|.|+.++..++
T Consensus 138 vF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~l 217 (510)
T KOG0629|consen 138 VFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFL 217 (510)
T ss_pred eEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHh
Confidence 3344456777778888887633366888888888777776442222110 0 011123456788999998887765
Q ss_pred HHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecc
Q 012991 151 VTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAA 229 (452)
Q Consensus 151 a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a 229 (452)
...--.++.+ +.++.+.+ +++||+.|-.....+..|.+|-++..++..|++.|++.|+++|++|++ ++|||+|
T Consensus 218 -g~gtd~c~~v----~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~l-WmHvDAA 291 (510)
T KOG0629|consen 218 -GLGTDHCIKV----KTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKL-WMHVDAA 291 (510)
T ss_pred -ccCCceeEEe----cccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCE-EEEeecc
Confidence 2112567777 56778888 999999987654445568999999999999999999999999999999 5999999
Q ss_pred cccCCcc-cc----ccc-cCccEEEEcCcccCcCCCCcEEEEEecCc-ccc-------CCCCCceeccCCCCcccccccc
Q 012991 230 HAMGSIK-ID----VKE-IGADFYVSNLHKWFFCPPSVAFLYCRKSI-LSS-------DMHHPVVSHEFGNGLPIESAWI 295 (452)
Q Consensus 230 ~~~g~~~-~~----~~~-~~~d~~~~s~~K~l~g~~G~G~l~~~~~~-~~~-------~l~~~~~~~~~~~~~~~~~~~~ 295 (452)
.+.|.+- .. +.. -.+|.++.++||+++.|..++..+.+.+- +.. ++...- ..|.... +..--
T Consensus 292 wGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~d--K~YdvS~--DTgdK 367 (510)
T KOG0629|consen 292 WGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQD--KFYDVSY--DTGDK 367 (510)
T ss_pred cccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccC--ceeeccc--ccccc
Confidence 8876541 11 111 14789999999998888777777766443 221 011100 0111110 00000
Q ss_pred cccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCc-ccccceEEEE-cCCcccc-CC--h
Q 012991 296 GTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPP-EICAAMVMVG-LPSRLRV-MG--E 370 (452)
Q Consensus 296 ~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~-~~--~ 370 (452)
+.....-.-.....+-|-..-.+|+++-.+++.++++|+.+.|++..++...... ....+ ++|+ .|..... .. .
T Consensus 368 ~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~n-v~fw~vp~~lR~~~~~~e 446 (510)
T KOG0629|consen 368 AIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVN-VCFWYVPPSLRGWQENPE 446 (510)
T ss_pred hhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEE-EeeccCchHhccCcccch
Confidence 1111111111222333333323589999999999999999999999886543332 22122 3332 2322111 10 0
Q ss_pred hh------HHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccc-cCCHHHHHHHHHHHHHHH
Q 012991 371 DD------ALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQV-YNTLEDYEKFRDAVILLV 440 (452)
Q Consensus 371 ~~------~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~t~~di~~l~~~l~~~~ 440 (452)
.+ +..+.+...++ |-... +|.+. ...++++|+.+.. ..+.+|++-+++.|.++-
T Consensus 447 ~~~rL~kVaPkIK~~Mm~~-Gt~Mi-~YqPl--------------~~~~nffr~v~sn~a~~~ad~dflldEIerlg 507 (510)
T KOG0629|consen 447 RDSRLVKVAPKIKERMMKK-GTTMI-GYQPL--------------GDKPNFFRMVISNPALTEADLDFLLDEIERLG 507 (510)
T ss_pred hhhHHHhhCcHHHHHHHhc-cceee-Eeccc--------------ccccchhheecccchhhhhhHHHHHHHHHHhc
Confidence 00 12344444444 44432 23321 3567799998854 357899999999987764
No 367
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=99.64 E-value=1e-13 Score=122.72 Aligned_cols=349 Identities=15% Similarity=0.155 Sum_probs=235.9
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHHhcCCch-----hhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEe-cChhHHH
Q 012991 38 HGVARINNGSFGSCPKSVLADQQKWQLKFLQQPDD-----FYFNSLRKGILESRAAVKDLINADDVGEISLV-DNATTAA 111 (452)
Q Consensus 38 ~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t-~g~t~a~ 111 (452)
+.+++|..| +...|.+|+..+++-+.++++.+.+ +.+..+..++.+.+..+.+++++|+...|+|. .|||..+
T Consensus 6 ~~vvnFaaG-PAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~qF 84 (370)
T KOG2790|consen 6 ERVVNFAAG-PAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTGQF 84 (370)
T ss_pred cceeecCCC-cccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCCcccc
Confidence 457788744 6677888888887777666655433 34567778899999999999999977788776 4678777
Q ss_pred HHHHHHhhcccccCCCCCC---CEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHH--HHHHHHHhcccc
Q 012991 112 AIVLQQIGRGFTEGRFHRN---DTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEII--NEFKKGIEKGKK 186 (452)
Q Consensus 112 ~~~~~~l~~~~~~~~~~~g---~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~--~~l~~~i~~~~~ 186 (452)
..+..+|.- ++.| |-|++-..+ .+++.. |.+.|..-..++-- ..-.++.++ +.++ +
T Consensus 85 aAv~lNL~g------lK~g~~AdYiVTGsWS----~KA~~E-Akk~~~~~~V~~~~-k~y~ygkvPd~~~w~--~----- 145 (370)
T KOG2790|consen 85 AAVPLNLIG------LKHGRCADYVVTGSWS----AKAAEE-AKKYGTPNIVIPKL-KSYTYGKVPDPSTWE--L----- 145 (370)
T ss_pred cccchhhhc------cccCCccceEEecccc----HHHHHH-HHhhCCceEEeccc-cccccCcCCChhhcc--c-----
Confidence 777777741 3444 456664433 255555 56666543333210 101122332 2222 2
Q ss_pred CCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEEEEE
Q 012991 187 DGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYC 266 (452)
Q Consensus 187 ~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~ 266 (452)
+++-+.|+.|...+..|+-++.-. +-.-++. +++.|-.+-+-..++|+..+ +++....+|. .||.|+.++++
T Consensus 146 -~~da~yvyyCaNETVHGVEf~~~P---~~~~~~~-vlVaDmSSnflSrpvDvsk~--gvi~aGAQKN-~G~aG~Tvviv 217 (370)
T KOG2790|consen 146 -NPDASYVYYCANETVHGVEFDFIP---VNDPKGA-VLVADMSSNFLSRPVDVSKF--GVIFAGAQKN-VGPAGVTVVIV 217 (370)
T ss_pred -CCCccEEEEecCceeeceecCCCC---CCCCCCc-eEEEecccchhcCCccchhc--ceEEeccccc-cCccccEEEEE
Confidence 566678999999999999765322 1223578 79999888888899999876 5688889996 89999999999
Q ss_pred ecCccccCC-CCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 012991 267 RKSILSSDM-HHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTS 345 (452)
Q Consensus 267 ~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~ 345 (452)
|++++.... ..|.. .+|-. +..+..-..||+...++.+...++|+.+ .+|+.++.+...+.+..+++.+.+.-|+-
T Consensus 218 r~dllg~~~~~tP~v-~dyk~-~~~NnSlyNTpP~f~iy~~~Lv~~~il~-~GGl~a~e~~n~~KskllYd~iD~s~gfy 294 (370)
T KOG2790|consen 218 RKDLLGNALDITPSV-LDYKI-MDKNNSLYNTPPCFGIYVMGLVFEWILE-KGGLAAMEKLNQEKSKLLYDAIDNSNGFY 294 (370)
T ss_pred ehhhhcccccCCccc-cceee-eccccccccCCCeeeeeehhhHHHHHHh-cccHHHHHHHHHHHHHHHHHHHHhcCCeE
Confidence 999987611 11211 01110 1122334578999999999999999998 58999999999999999999999875653
Q ss_pred -cCCCccccc-ceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEeccccc
Q 012991 346 -LGSPPEICA-AMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVY 423 (452)
Q Consensus 346 -~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~ 423 (452)
.+-.+..++ .-+.|++.+ +....+-+.++. ++ +..--.++++ .|.+|.|+-..
T Consensus 295 ~cpVe~~~RS~MNV~Fri~~-----d~Le~eFLkeA~-~~-~mv~LKGhRS------------------VGGiRASlYNA 349 (370)
T KOG2790|consen 295 RCPVEPSVRSRMNVPFRIEK-----DELEAEFLKEAA-KE-HMVQLKGHRS------------------VGGIRASLYNA 349 (370)
T ss_pred Ecccchhhhhhcccceeecc-----hHHHHHHHHHHH-Hh-hhhccccccc------------------cccchhhhhcc
Confidence 222222223 235677742 455555565655 43 4432233433 46899999888
Q ss_pred CCHHHHHHHHHHHHHHHhc
Q 012991 424 NTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 424 ~t~~di~~l~~~l~~~~~~ 442 (452)
.+-+++++|++.|+++.+.
T Consensus 350 isv~~~q~L~~~m~~F~k~ 368 (370)
T KOG2790|consen 350 ISVEEVQKLAAFMKEFQKK 368 (370)
T ss_pred ccHHHHHHHHHHHHHHHHh
Confidence 8999999999999998753
No 368
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.62 E-value=4.1e-13 Score=121.41 Aligned_cols=328 Identities=14% Similarity=0.145 Sum_probs=210.3
Q ss_pred CCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhccccc--CC
Q 012991 49 GSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTE--GR 126 (452)
Q Consensus 49 ~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~--~~ 126 (452)
|...+.+++++++..+.+.- .++ ........+..+.+.++|+. +.++-++.|.+|.+.++. |+|+|.. .-
T Consensus 74 Ghchpki~~aLqeq~~kLtl-ssr---afYnd~~~~f~~~vt~lf~~---~kvlpmnTGaEa~Eta~K-LaR~wgy~~K~ 145 (427)
T KOG1402|consen 74 GHCHPKIIKALQEQADKLTL-SSR---AFYNDVLGEFAEYVTKLFGY---DKVLPMNTGAEAVETACK-LARKWGYRKKN 145 (427)
T ss_pred CCCCHHHHHHHHHHHhHhhh-hhH---HHhhhhHHHHHHHHHHhcCc---ceeeecccchhHHHHHHH-HHHHHHHhhcc
Confidence 34445599999888775421 112 11245677888999999998 478888889999999998 5555432 11
Q ss_pred CCCCC-EEEEeCCcchhHHHHHHHHH------HhcCc----EEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEE
Q 012991 127 FHRND-TVLMLHCAFQAVKKSIQAYV------TRAGG----SVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAI 195 (452)
Q Consensus 127 ~~~g~-~Vl~~~~~~~s~~~~~~~~a------~~~g~----~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~ 195 (452)
...+. .|+....+|++-..++-.++ ..+|- -+..+ |.++ .++|+.+++ .++.++++
T Consensus 146 ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v----~Y~d----~eale~~l~-----~~~vaaFi 212 (427)
T KOG1402|consen 146 IPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKV----PYGD----AEALEVALK-----SPNVAAFI 212 (427)
T ss_pred CCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceee----ccCC----HHHHHHHhc-----CCCeeEEE
Confidence 22233 45555666654221111100 00010 01111 1111 688999997 68899999
Q ss_pred EeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccccCC-----ccccccccCccEEEEcCcccCcC-CCCcEEEE
Q 012991 196 IDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHAMGS-----IKIDVKEIGADFYVSNLHKWFFC-PPSVAFLY 265 (452)
Q Consensus 196 ~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~~g~-----~~~~~~~~~~d~~~~s~~K~l~g-~~G~G~l~ 265 (452)
++.++.--|++.| ++.+.++|++||+ ++|.|+.|+.-. ...|.....+|++++. |.|.| .+.++.++
T Consensus 213 vEPIQGEaGVvvP~~GYL~~vreLCtkynv-l~I~DEvQTGl~RTGk~la~d~env~PDivilg--KalSGG~~Pvsavl 289 (427)
T KOG1402|consen 213 VEPIQGEAGVVVPPPGYLKKVRELCTKYNV-LLIADEVQTGLARTGKLLACDYENVRPDIVILG--KALSGGVYPVSAVL 289 (427)
T ss_pred eeccccccceEeCCchhHHHHHHHHHhhcE-EEEehhhhhcccccCcEEEeehhhcCCCeEEEe--ccccCCeeeeEEEE
Confidence 9999999999987 7899999999999 999999986422 2457777789999987 77654 34467777
Q ss_pred EecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcC-C
Q 012991 266 CRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWG-T 344 (452)
Q Consensus 266 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~-~ 344 (452)
+.+++... +.|-. ..+++.|.| ......-++++.+. .+.+.++...+...++..|.+++. +
T Consensus 290 ~~~~im~~--~~pge---------HgsTyggNp--Lg~~vaiAalevi~-----eekL~era~~lG~~l~~~L~~l~~~~ 351 (427)
T KOG1402|consen 290 ADDDIMLN--IKPGE---------HGSTYGGNP--LGCAVAIAALEVIV-----EEKLVERAAKLGEILRDQLNKLQKKF 351 (427)
T ss_pred ecHHHHhc--cCCCc---------cccccCCCh--HHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccccc
Confidence 77777654 22221 111112222 22222334556655 477889999999999999988742 2
Q ss_pred -CcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEeccccc
Q 012991 345 -SLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVY 423 (452)
Q Consensus 345 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~ 423 (452)
.+......++.+..+.+... ...+.++.+++-.|.+ .|+...+.+ ++.||+.+...
T Consensus 352 p~~v~~VRGrGl~~ai~i~~~--~~~~~~aw~~cl~lk~-~g~LAkptH--------------------~~IiRfaPPL~ 408 (427)
T KOG1402|consen 352 PHVVKEVRGRGLLNAIVINPS--KTSGQDAWDVCLALKE-NGLLAKPTH--------------------GNIIRFAPPLV 408 (427)
T ss_pred cchhheeeccceEEEEEeccc--cccchhHHHHHHcccc-cccccCCCC--------------------CCeEEecCCcc
Confidence 12333333455554443210 0124577788888865 488764332 35999999998
Q ss_pred CCHHHHHHHHHHHHHHHh
Q 012991 424 NTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 424 ~t~~di~~l~~~l~~~~~ 441 (452)
.+++|++.-+++|++.+.
T Consensus 409 I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 409 ISEEDLREGIEAIEKTIA 426 (427)
T ss_pred cCHHHHHHHHHHHHHHhc
Confidence 999999999999998764
No 369
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.61 E-value=2.3e-15 Score=140.95 Aligned_cols=195 Identities=15% Similarity=0.208 Sum_probs=140.6
Q ss_pred HHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCE
Q 012991 53 KSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDT 132 (452)
Q Consensus 53 ~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~ 132 (452)
+++++++.+.. .+.. .|+.++...++++.+++++|.+ ..+|+++||.|+.+++.++ +++++.
T Consensus 9 ~~m~~a~~~a~-----~gd~--~Yg~D~~~~~l~~~i~~l~g~e---~a~f~~sGT~An~~al~~~--------~~~~~~ 70 (290)
T PF01212_consen 9 PAMLEAMAAAN-----VGDD--AYGEDPTTARLEERIAELFGKE---AALFVPSGTMANQLALRAH--------LRPGES 70 (290)
T ss_dssp HHEEHHHHHTT-----SB-C--CTTSSHHHHHHHHHHHHHHTSS---EEEEESSHHHHHHHHHHHH--------HHTTEE
T ss_pred HHHHHHHHccc-----cCCc--ccCCChhHHHHHHHHHHHcCCC---EEEEeCCCChHHHHHHHHH--------HhcCCc
Confidence 33777774321 1222 3667788999999999999995 5679999999999999988 378899
Q ss_pred EEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCC-cccccH-
Q 012991 133 VLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMP-CVVIPV- 209 (452)
Q Consensus 133 Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~t-G~~~~l- 209 (452)
|+..++.|..+...-.. +...|.++..++ ..+.+.+ +++|++.++....+..++++|.++++++.. |.++++
T Consensus 71 vi~~~~aHi~~~E~ga~-~~~~G~~~~~l~----~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~ 145 (290)
T PF01212_consen 71 VICADTAHIHFDETGAI-EELSGAKLIPLP----SDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLE 145 (290)
T ss_dssp EEEETTEHHHHSSTTHH-HHHTTCEEEEEB----ECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HH
T ss_pred eeccccceeeeeccchh-hHhcCcEEEECC----CcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHH
Confidence 99998888755433221 345799999994 3343666 999999998754445789999999988753 888875
Q ss_pred --HHHHHHHHHcCCCEEEEeccc---c---cCCccccccccCccEEEEcCcccCcCCCCcEEEEEecCcccc
Q 012991 210 --RKLVKICRDEGVDQVFVDAAH---A---MGSIKIDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSS 273 (452)
Q Consensus 210 --~~i~~l~~~~~~~~~ivD~a~---~---~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~ 273 (452)
++|.++||++|+ .+|+|||- + .+....++. .++|++++|++|.++.+.| ++++++++.++.
T Consensus 146 el~ai~~~a~~~gl-~lhmDGARl~~a~~~~~~~~~e~~-~~~D~v~~~~tK~~g~~~G-avl~~~~~~i~~ 214 (290)
T PF01212_consen 146 ELRAISELAREHGL-PLHMDGARLANAAAALGVSLAEIA-AGADSVSFGGTKNGGAPGG-AVLAGNKEFIAK 214 (290)
T ss_dssp HHHHHHHHHHHHT--EEEEEETTHHHHHCHHHHHHHHHH-TTSSEEEEETTSTT-SSSE-EEEEESHHHHHH
T ss_pred HHHHHHHHHHhCce-EEEEehhhHHHhhhcccccHHHHh-hhCCEEEEEEEcccccccc-eEEEechHHHHH
Confidence 467888999999 89999982 2 233233333 3699999999998555554 888899886654
No 370
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.58 E-value=6.7e-13 Score=132.42 Aligned_cols=333 Identities=15% Similarity=0.092 Sum_probs=180.6
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGR 126 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~ 126 (452)
..|...+.+.+++.+.+.... . +. .......++.++|++++.. .+.+.|+++||+|++.++. ++|.+
T Consensus 61 ~lGh~~p~v~~Ai~~q~~~~~----~-~~-~~~~~~~~la~~l~~~~p~--~~~v~f~~sGseA~e~Alk-lAr~~---- 127 (431)
T PRK06209 61 GLGHAYPPVVEAVREALQDGC----N-FT-RPSAIELDAAESFLELIDG--ADMVKFCKNGSDATSAAVR-LARAY---- 127 (431)
T ss_pred hcCCCCHHHHHHHHHHHHhCc----C-CC-CCCHHHHHHHHHHHHhCCc--cceEEEecCHHHHHHHHHH-HHHHH----
Confidence 456777889999999887532 1 11 1233344677888888753 3689999999999999998 55544
Q ss_pred CCCCCEEEEe-CCcchhHHHHHHHH-HHhcCcE--EEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCC
Q 012991 127 FHRNDTVLML-HCAFQAVKKSIQAY-VTRAGGS--VVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSM 202 (452)
Q Consensus 127 ~~~g~~Vl~~-~~~~~s~~~~~~~~-a~~~g~~--v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~ 202 (452)
....+|+.. ...|++........ ....+.. +.......+.++ ++.+++.+++. ..++++|+++....+
T Consensus 128 -tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d----~~~l~~~l~~~---~~~~aavi~Epv~g~ 199 (431)
T PRK06209 128 -TGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFRYND----IASLEALFEDH---PGRIACVILEPATAD 199 (431)
T ss_pred -hCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccCCCC----HHHHHHHHHhC---CCCEEEEEEccccCC
Confidence 233566665 34443311110000 0000100 000000012222 67888888642 356888888776544
Q ss_pred CcccccHHHHHHHHHHcCCCEEEEecccccCCccc--cc---cccCccEEEEcCcccCcCCCCcEEEEEecCccccCCCC
Q 012991 203 PCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKI--DV---KEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMHH 277 (452)
Q Consensus 203 tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~--~~---~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~~ 277 (452)
.+....+++|.++|++||+ ++|+|+++. |.... .. ....+|++++ .|.++|+..+|+++.++++.+. +
T Consensus 200 ~~~~~~l~~l~~lc~~~g~-lLI~DEv~t-G~~~~~~g~~~~~gv~PDi~t~--gK~lggG~p~~av~~~~~i~~~-~-- 272 (431)
T PRK06209 200 EPQDGFLHEVRRLCHENGA-LFILDEMIT-GFRWHMRGAQKLYGIVPDLSCF--GKALGNGFAVSALAGKREYMEL-G-- 272 (431)
T ss_pred CCCHHHHHHHHHHHHHcCC-EEEEEcccc-cCCcCcchhhHHhCCCcceeee--hhhhcCCcccEEEEEHHHHHhh-h--
Confidence 3333348899999999999 899999983 32111 11 1235788665 5988765446888888776653 0
Q ss_pred CceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHc-CCCcCCC---cccc
Q 012991 278 PVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAW-GTSLGSP---PEIC 353 (452)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~---~~~~ 353 (452)
.+....... ......+.+++.....+..++++.+.+ +.+.++.+++.+++++.|.++. ...+... ....
T Consensus 273 ~~~~~~~~~--~~~~~~T~~~np~~~aaa~a~l~~i~~-----~~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~ 345 (431)
T PRK06209 273 GLEHTDRER--VFLLSTTHGAETHALAAAIATMAIYRD-----EDVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRP 345 (431)
T ss_pred cccccCCCC--ceeeccCCCCCHHHHHHHHHHHHHHhc-----cCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecce
Confidence 000000000 000001122333445555566676664 2357777788888888776541 1111111 1111
Q ss_pred cceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHH
Q 012991 354 AAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFR 433 (452)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~ 433 (452)
..+..+... ..+.....-...+.+.|.++ ||.++ .++++ ..+|++||++++
T Consensus 346 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~-Gi~~p-------------------------~l~is--~~ht~~dId~~l 396 (431)
T PRK06209 346 CCLTYSTLD-GNGQPSQAFRTLFLQETIRR-GVLMP-------------------------SLVVS--YAHGDADIERTI 396 (431)
T ss_pred EEEEEecCC-cccCCcHHHHHHHHHHHHHC-Ccccc-------------------------ccccc--ccCCHHHHHHHH
Confidence 112221111 00000111123566777664 98763 24454 346999999999
Q ss_pred HHHHHHHhcc
Q 012991 434 DAVILLVEEG 443 (452)
Q Consensus 434 ~~l~~~~~~~ 443 (452)
+++.+++..-
T Consensus 397 ~~l~~~l~~~ 406 (431)
T PRK06209 397 DAVHGALGVY 406 (431)
T ss_pred HHHHHHHHHH
Confidence 9999888653
No 371
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.57 E-value=2e-12 Score=136.23 Aligned_cols=355 Identities=11% Similarity=0.059 Sum_probs=201.6
Q ss_pred CcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCC--
Q 012991 51 CPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFH-- 128 (452)
Q Consensus 51 ~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~-- 128 (452)
..+.+.+++.+.+..+. +..+.....+...++-++|++..+.+..+.++|++||++|++.++....++|....-.
T Consensus 383 ~~p~I~~Ai~~Qa~rl~---hv~~~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~ 459 (817)
T PLN02974 383 LQPELARAVAYAAGRYG---HVMFPENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLE 459 (817)
T ss_pred CCHHHHHHHHHHHhhCC---ccccCccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCc
Confidence 35669999998876641 1111111234456666777775442213689999999999999998553434211001
Q ss_pred -----------CCCEEEEeCCcchhHHHHHHHHHHhc---C---cE-----EEEEeCCC------------CCC------
Q 012991 129 -----------RNDTVLMLHCAFQAVKKSIQAYVTRA---G---GS-----VVEVQLPF------------PLA------ 168 (452)
Q Consensus 129 -----------~g~~Vl~~~~~~~s~~~~~~~~a~~~---g---~~-----v~~~~~~~------------~~~------ 168 (452)
...+||....+||+.......+.... + .. ...++.+. |..
T Consensus 460 ~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~ 539 (817)
T PLN02974 460 NSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLE 539 (817)
T ss_pred ccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCcccccccc
Confidence 24579999999888655544321100 0 00 01111100 000
Q ss_pred -----------------C---hHHH-HHHHHHHHhccc--cCCCceEEEEEecc-CCCCccccc----HHHHHHHHHHcC
Q 012991 169 -----------------S---EEEI-INEFKKGIEKGK--KDGKMIRLAIIDHI-TSMPCVVIP----VRKLVKICRDEG 220 (452)
Q Consensus 169 -----------------~---~~~~-~~~l~~~i~~~~--~~~~~~~lv~~~~~-~n~tG~~~~----l~~i~~l~~~~~ 220 (452)
+ .... .+.+++.|++.. ...+++.+|+++-. ....|++.+ ++.|.++|++||
T Consensus 540 ~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~g 619 (817)
T PLN02974 540 GEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRK 619 (817)
T ss_pred ccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhC
Confidence 0 0011 366777775311 12357899999984 666788865 778999999999
Q ss_pred CCEEEEecccc-cCCcc----ccccccCccEEEEcCcccCcCC-CCcEEEEEecCccccCCCCCceeccCCCCccccccc
Q 012991 221 VDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLHKWFFCP-PSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAW 294 (452)
Q Consensus 221 ~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~l~g~-~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 294 (452)
+ ++|.|+++. +|-.. .+.....+|+++++ |.|.|+ ..+|.+++++++.+. +..+. .........++
T Consensus 620 i-lLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~~g--KgLtgG~~Plaa~l~~~~I~~~-f~~~~----~~~~~~hg~Ty 691 (817)
T PLN02974 620 I-PVIFDEVFTGLWRLGVESAWELLGCKPDIACYA--KLLTGGLVPLAATLATEEVFEA-FRGPS----KLDALLHGHSY 691 (817)
T ss_pred C-EEEEeecccCCCcccchhhHHhcCCCCCEEeec--ccccCCCCccEEEEEcHHHHHh-hcccc----ccCCcccCCCC
Confidence 9 899999975 33221 22223458999988 988776 358999999888775 21110 00000000111
Q ss_pred ccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHH-HHcCCCcCCCcccccceEEEEcCCccccCC--hh
Q 012991 295 IGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLA-NAWGTSLGSPPEICAAMVMVGLPSRLRVMG--ED 371 (452)
Q Consensus 295 ~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 371 (452)
+-+..+..+..++++.+++. +-.+.+.++..++..++.+.|. .+.....+......+.++.+.+.+...... ..
T Consensus 692 --~gnpl~cAaala~L~~~~~~-~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~~~~~~~ 768 (817)
T PLN02974 692 --TAHPMGCAAAAKALQWYKDP-STNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSGSGYSSL 768 (817)
T ss_pred --CcCHHHHHHHHHHHHHHHcc-cHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCcccccchH
Confidence 11222223333455555541 1234556666666666666662 232233333333446677776642100000 01
Q ss_pred hHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHH
Q 012991 372 DALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLV 440 (452)
Q Consensus 372 ~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~ 440 (452)
-+..+.+.+..+.||.++.. ++.||+.+...+++++++++++.|.+.+
T Consensus 769 ~a~~v~~~~~~~~Gl~~r~~---------------------Gnvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 769 YARSVVRRLRREDGIYARPL---------------------GNVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred HHHHHHHHHHHhCCEEEEec---------------------CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 24567778872359998631 2589999888899999999999998765
No 372
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.56 E-value=1.3e-12 Score=121.02 Aligned_cols=333 Identities=16% Similarity=0.140 Sum_probs=205.4
Q ss_pred CCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCC
Q 012991 49 GSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFH 128 (452)
Q Consensus 49 ~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~ 128 (452)
|...+.|.+++.+.+..++ ..... + ..+-..++.+.|+..+..+ -..++|++||++|+++++. ++|.|+
T Consensus 65 GHchP~v~~a~~kQl~~l~-H~t~~--~-~~~pi~~~Ae~L~s~~P~~-l~~vfF~nsGsEANelal~-mar~Yt----- 133 (442)
T KOG1404|consen 65 GHCHPDVVAAAVKQLKKLY-HTTSG--Y-LNPPIHDLAEALVSKLPGD-LKVVFFVNSGSEANELALK-MARLYT----- 133 (442)
T ss_pred CCCChHHHHHHHHhhhhhE-Eeecc--c-cCCcHHHHHHHHHHhCCCC-ceEEEEecCCchHHHHHHH-HHHHhc-----
Confidence 4455668888888775432 11111 2 2334567777788877664 5678999999999999987 666653
Q ss_pred CCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeC------------C------CCCCC----hHHHHHHHHHHHhcccc
Q 012991 129 RNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQL------------P------FPLAS----EEEIINEFKKGIEKGKK 186 (452)
Q Consensus 129 ~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~------------~------~~~~~----~~~~~~~l~~~i~~~~~ 186 (452)
..-+||..+.+|+++.....- ..+......+. + ++-++ .+.+.++++..+....
T Consensus 134 ~~~diIa~r~~YHG~t~~t~g---lt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~- 209 (442)
T KOG1404|consen 134 GNLDIIARRNSYHGNTLYTLG---LTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDG- 209 (442)
T ss_pred CCceEEEeeccccCCchhhcc---cccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcC-
Confidence 233788888888776433211 11211111111 0 11111 1222566666665432
Q ss_pred CCCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEeccccc-CCc----cccccccCccEEEEcCcccCcC
Q 012991 187 DGKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHAM-GSI----KIDVKEIGADFYVSNLHKWFFC 257 (452)
Q Consensus 187 ~~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~~-g~~----~~~~~~~~~d~~~~s~~K~l~g 257 (452)
.+.+++++.+.+....|.+.+ ++++.++|+++|. ++|.|++++. |-. .++-...-+|+++.+ |.|++
T Consensus 210 -~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Gg-l~IaDEVqtGfGRtG~~wgfe~h~v~PDIvTmA--KgiGn 285 (442)
T KOG1404|consen 210 -PETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGG-LFIADEVQTGFGRTGHMWGFESHGVVPDIVTMA--KGIGN 285 (442)
T ss_pred -CCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCC-EEEehhhhhccccccccccccccCCCccHHHHH--hhccC
Confidence 345789999999998898864 7899999999999 9999999863 322 223333347888776 98887
Q ss_pred CCCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Q 012991 258 PPSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARM 337 (452)
Q Consensus 258 ~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~ 337 (452)
...+|.++..+++... +.... .+ . .++ +..+.+...+ .++++.++ .+++.++..+...+|.+.
T Consensus 286 G~Pl~AVvtt~EIa~v-~~~~~-~~--f------nTy-ggnP~a~avg-~aVL~Vik-----ee~LqE~aa~vG~yl~~~ 348 (442)
T KOG1404|consen 286 GFPLGAVVTTPEIADV-LNQKS-SH--F------NTY-GGNPVACAVG-LAVLKVIK-----EENLQENAAEVGSYLLEK 348 (442)
T ss_pred CCcceeeecCHHHHHH-HHhcc-cc--c------ccc-CCCchhHHHH-HHHHHHHH-----HHhHHHHHHHHHHHHHHH
Confidence 7668999998887765 21111 00 0 001 2222222222 23555555 478899999999999999
Q ss_pred HHHHcC-CCcCCCcccccceEEEEcCC-ccccCC--hhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCcc
Q 012991 338 LANAWG-TSLGSPPEICAAMVMVGLPS-RLRVMG--EDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIIT 413 (452)
Q Consensus 338 L~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (452)
|.++.. .++++....++-++-+.+-+ ...... ..-...+.+.+.+ +|+.+..+. ..+
T Consensus 349 l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke-~Gvlvg~g~------------------i~G 409 (442)
T KOG1404|consen 349 LAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKE-LGVLVGKGG------------------IHG 409 (442)
T ss_pred HHHHhhcCCceeecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHH-hCeeeeccc------------------ccc
Confidence 988743 45666555555555555421 101111 1122356777755 699995433 234
Q ss_pred ceEEecccccCCHHHHHHHHHHH
Q 012991 414 GYARISHQVYNTLEDYEKFRDAV 436 (452)
Q Consensus 414 ~~iRis~~~~~t~~di~~l~~~l 436 (452)
+.+||++..--|.+|++.+++..
T Consensus 410 ~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 410 NVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred eEEEecCCeeccHHHHHHHHHHH
Confidence 59999999888999998777755
No 373
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.56 E-value=2.6e-12 Score=120.81 Aligned_cols=338 Identities=18% Similarity=0.186 Sum_probs=218.1
Q ss_pred EeccCCCC-CCcHHHHH-HHHHHHHHHhcC-Cchh-hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHH
Q 012991 42 RINNGSFG-SCPKSVLA-DQQKWQLKFLQQ-PDDF-YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQ 117 (452)
Q Consensus 42 ~l~~~~~~-~~p~~v~e-~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~ 117 (452)
|++.|.++ ..|+ |++ .+-+.-..+..+ |-.. -+.+..+.+.+.+..++++.|.+ ..+.-+--++|++-+.+..+
T Consensus 79 fiG~GyY~~~~P~-vI~rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~-VANASm~DeaTAaAEAm~ma 156 (450)
T COG0403 79 FIGAGYYDTYTPP-VILRNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLD-VANASMLDEATAAAEAMLMA 156 (450)
T ss_pred hccCcccCCcCcH-HHHHHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCC-cccchhhhhHHHHHHHHHHH
Confidence 67777777 4555 444 544322111100 1000 12344556788999999999996 77888888888887777776
Q ss_pred hhcccccCCCCC--CCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEE
Q 012991 118 IGRGFTEGRFHR--NDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAI 195 (452)
Q Consensus 118 l~~~~~~~~~~~--g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~ 195 (452)
.. ..+ .++|+++...|+.....++-+++..|+++...+. ++ .+++++. + ...+..++
T Consensus 157 ~r-------~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~----~d----~~~l~~~-~-----~~~~~gv~ 215 (450)
T COG0403 157 KR-------VTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDA----DD----LDDLESA-D-----DGDVFGVL 215 (450)
T ss_pred HH-------hhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEecc----ch----hhhhhhc-c-----ccCeEEEE
Confidence 52 233 5899999999999999998888888999998843 32 5777766 3 56899999
Q ss_pred EeccCCCCc-ccccHHHHHHHHHHcCCCEEEEec-ccccCCccccccccCccEEEEcCcccCcCC-----CCcEEEEEec
Q 012991 196 IDHITSMPC-VVIPVRKLVKICRDEGVDQVFVDA-AHAMGSIKIDVKEIGADFYVSNLHKWFFCP-----PSVAFLYCRK 268 (452)
Q Consensus 196 ~~~~~n~tG-~~~~l~~i~~l~~~~~~~~~ivD~-a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~-----~G~G~l~~~~ 268 (452)
+.+|++ .| ...++++|.+.+|++|. ++++=. --+++.+ -....+|+|+++++.+- ++-| +..|++.+++
T Consensus 216 vQyP~~-~G~~~~d~~~l~~~~h~~~a-l~~v~aDplaL~LL-~pPGe~GADIvvG~~Qr-fGvPmgfGGPhag~fA~~~ 291 (450)
T COG0403 216 VQYPNT-FGIVEEDLRALIEAAHSAGA-LVIVAADPLALGLL-KPPGEFGADIVVGSAQR-FGVPMGFGGPHAGYFAVKD 291 (450)
T ss_pred EecCCC-CCccchhHHHHHHHHhhcCC-EEEEEechhHhhcc-CCccccCCceEEecCcc-cCCCcCCCCcceeeeeEhH
Confidence 999985 67 66679999999999998 676642 2233333 23445699999999887 4333 3378999999
Q ss_pred CccccCCCCCcee---cc-CCCC---cccc------cccccccCccccccHHH-----HHHHHHHhhcCHHHHHHHHHHH
Q 012991 269 SILSSDMHHPVVS---HE-FGNG---LPIE------SAWIGTRDYSAQLVIPS-----AVTFVSRFEGGIDGIMQRNHEQ 330 (452)
Q Consensus 269 ~~~~~~l~~~~~~---~~-~~~~---~~~~------~~~~~~~~~~~~~~~~~-----al~~~~~~~~g~~~~~~~~~~~ 330 (452)
+..++ ++..+. .+ .|.. +..+ +..-.|.|+....++.+ .+.++.. .|++++.+++.++
T Consensus 292 ~~~R~--mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp--~GLk~iA~r~~~~ 367 (450)
T COG0403 292 EFKRQ--MPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGP--QGLKEIAERIHRL 367 (450)
T ss_pred hHhhc--CCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhCh--HHHHHHHHHHHHH
Confidence 99876 444331 11 1111 0000 11234455543333222 2234443 3899999999999
Q ss_pred HHHHHHHHHHHc-CCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCC
Q 012991 331 ALKMARMLANAW-GTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKD 409 (452)
Q Consensus 331 ~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~ 409 (452)
+.++.++|.+.. |+++..... -.-+.++++ ......+.++... .||-++..
T Consensus 368 a~~la~~L~~~~~g~~~~~~~f--Fdt~~v~~~-------~~~~~~l~~~~~~-~G~~L~~~------------------ 419 (450)
T COG0403 368 AAYLAAGLKEIGAGVELVFDHF--FDTFTVRVP-------EEVAEALLAAAIA-GGINLRRV------------------ 419 (450)
T ss_pred HHHHHHHHhhcCCceEeccccc--eeeEEEecc-------hhHHHHHHHHHHh-cCCceeee------------------
Confidence 999999999763 456554311 122334443 1233445555433 47777532
Q ss_pred CCccceEEecccccCCHHHHHHHHHHHHHHH
Q 012991 410 GIITGYARISHQVYNTLEDYEKFRDAVILLV 440 (452)
Q Consensus 410 ~~~~~~iRis~~~~~t~~di~~l~~~l~~~~ 440 (452)
....+-+++.-.+|.+||+.+++++....
T Consensus 420 --~~~~~~ia~tEt~t~~~i~~l~~~~~~~~ 448 (450)
T COG0403 420 --DADTVLIALTETTTKEDIDALVAAFGGVN 448 (450)
T ss_pred --cCCceEEEeecccCHHHHHHHHHHHhhhc
Confidence 23467888888889999999999987653
No 374
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.53 E-value=1.3e-12 Score=120.84 Aligned_cols=355 Identities=14% Similarity=0.149 Sum_probs=210.6
Q ss_pred CCCCeEEeccCCCC--CCcHHHHHHHHHHHHHHhcC-CchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHH
Q 012991 36 HQHGVARINNGSFG--SCPKSVLADQQKWQLKFLQQ-PDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAA 112 (452)
Q Consensus 36 ~~~~~~~l~~~~~~--~~p~~v~e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~ 112 (452)
.+++++++...++. ...+.+.+.....+..+.-. =+....|+....=.++++.||+++|++ +.|+...|-+ ++.
T Consensus 92 ~G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~E--~aivYs~gF~-ti~ 168 (467)
T KOG1358|consen 92 DGKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGTE--DAIVYSYGFS-TIE 168 (467)
T ss_pred cCceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCCc--ceeeeccccc-hhh
Confidence 35667777666654 23344666655555544110 001112444455577999999999996 7777777665 456
Q ss_pred HHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH---HHHHHHHHhccccCCC
Q 012991 113 IVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI---INEFKKGIEKGKKDGK 189 (452)
Q Consensus 113 ~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~---~~~l~~~i~~~~~~~~ 189 (452)
.++-++ .+.||.|+++...+.++..+++. . .-.+.++ .+++...+ ....+..-++.++. .
T Consensus 169 S~ipaf--------sKrGDIi~~de~~nfaIq~Glql--S--RS~i~~F----khndm~~lerll~E~~~~~~K~~k~-~ 231 (467)
T KOG1358|consen 169 SAIPAF--------SKRGDIIFVDEAVNFAIQKGLQL--S--RSTISYF----KHNDMEDLERLLPEQEDEDQKNPKK-A 231 (467)
T ss_pred hcchhh--------hccCcEEEEehhhhHHHHHHHhh--h--hheeEEe----cCCCHHHHHHhccCcchhhhhcccc-c
Confidence 666655 58899999998888887777654 2 3355555 44443222 11111111121111 1
Q ss_pred c-eEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCcc---------ccccccCccEEEEcCcccCcCCC
Q 012991 190 M-IRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIK---------IDVKEIGADFYVSNLHKWFFCPP 259 (452)
Q Consensus 190 ~-~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~---------~~~~~~~~d~~~~s~~K~l~g~~ 259 (452)
. .+.|+++...-++|.++|+++|.++..+|.. .+|+|+..++|... +.+..-.+|++++|..-. .+..
T Consensus 232 ~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~-RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~a-las~ 309 (467)
T KOG1358|consen 232 LTRRFIVVEGLYANTGDICPLPEIVKLKNKYKF-RVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETA-LASG 309 (467)
T ss_pred cceEEEEEEeeccCCCcccccHHHHHHHhhheE-EEEEecccccccccccCccccccCCCCccceeeeeeccccc-cccc
Confidence 2 4678899999999999999999999999999 89999998887542 223333579999998775 3444
Q ss_pred CcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHH
Q 012991 260 SVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLA 339 (452)
Q Consensus 260 G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~ 339 (452)
| |+..++.-.... .... |.+.... ...|++....+. .++..+.+ ...+.+.++.....+...|.
T Consensus 310 G-gFc~G~~~i~~h---QrLS----g~~Y~fS---AslPp~la~aa~-~ai~i~~~----~p~~~~~L~~k~~~~H~~l~ 373 (467)
T KOG1358|consen 310 G-GFCAGKSFIADH---QRLS----GSGYCFS---ASLPPYLAGAAI-KAILIEEW----NPEIVQPLRAKVAKFHAALS 373 (467)
T ss_pred C-ceeecceeeEee---eecc----ccceeee---ccCchhhhhhHH-HHHHHHhh----Ccchhhhhhccccccchhhh
Confidence 3 565554333332 2221 1111111 134444333332 24444443 12256667777777888887
Q ss_pred HHcCCCcCCCcccccceEEEEcCCccccCC-hh-hHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEE
Q 012991 340 NAWGTSLGSPPEICAAMVMVGLPSRLRVMG-ED-DALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYAR 417 (452)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iR 417 (452)
...++.+.+.+. ++++.+.+.+...-.+ .. -.+++++....+ ++.+.....-.. .++ ...+..||
T Consensus 374 ~~s~~~v~~~~~--SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~---------~e~-~~~~pSir 440 (467)
T KOG1358|consen 374 SNSGFIVSGSPE--SPIIHLQLERSYGSREKEEKLLEEIVDKCIAE-GVLLTRAKYLEK---------LER-CPIPPSIR 440 (467)
T ss_pred cCCceEEecCcC--CceeeeeecccccchHHHHHHHHHHHHHHHhh-cceehhhhhhhh---------ccc-CCCCCcEE
Confidence 665667766655 6777777653211110 11 124566666555 776632111000 000 23455799
Q ss_pred ecccccCCHHHHHHHHHHHHHHHh
Q 012991 418 ISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 418 is~~~~~t~~di~~l~~~l~~~~~ 441 (452)
+++....+++|++++++.|+++..
T Consensus 441 i~~~a~~seeel~ra~~~ik~~~~ 464 (467)
T KOG1358|consen 441 ICVSAGMSEEELERAAELIKEVAS 464 (467)
T ss_pred EEEeCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999998864
No 375
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.51 E-value=1.8e-12 Score=120.74 Aligned_cols=315 Identities=15% Similarity=0.164 Sum_probs=169.0
Q ss_pred hhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccC-------CCC-CCCEEEEeCCcchhHHHHHH
Q 012991 77 SLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEG-------RFH-RNDTVLMLHCAFQAVKKSIQ 148 (452)
Q Consensus 77 ~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~-------~~~-~g~~Vl~~~~~~~s~~~~~~ 148 (452)
+-..++.++|+..++++|++ ++++++..+++-. ++...+.+.+.+. ..+ +.-+.+.+.|.|.-+ .++
T Consensus 66 G~l~Gipe~r~l~a~llgv~-~~~viv~gNSSL~--lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRH-Fai- 140 (425)
T PF12897_consen 66 GGLDGIPEARELFAELLGVP-PENVIVGGNSSLN--LMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRH-FAI- 140 (425)
T ss_dssp S-SS--HHHHHHHHHHHTS--GGGEEE-SS-HHH--HHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHH-HHH-
T ss_pred CccCChHHHHHHHHHHhCCC-HHHEEEeccchHH--HHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHH-HHH-
Confidence 56778999999999999997 7888887666543 3333333333211 111 233789999998764 333
Q ss_pred HHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEE-EEEeccCCCCcccccHHHHHHHHH----HcCCCE
Q 012991 149 AYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRL-AIIDHITSMPCVVIPVRKLVKICR----DEGVDQ 223 (452)
Q Consensus 149 ~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~l-v~~~~~~n~tG~~~~l~~i~~l~~----~~~~~~ 223 (452)
++..|++...||+ .+++...|.+|+.+.+ .+.+|. ..++--+||||..++-+.+.+++. ..+. .
T Consensus 141 --~E~~Giemi~VpM----~~dGPDmD~Ve~LV~~----D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DF-R 209 (425)
T PF12897_consen 141 --TEHFGIEMIPVPM----TEDGPDMDMVEELVAE----DPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDF-R 209 (425)
T ss_dssp --HHHCT-EEEEEEE----ETTEE-HHHHHHHTHT----STTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT--E
T ss_pred --HHhhCcEEEecCC----CCCCCCHHHHHHHHhc----CCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCe-E
Confidence 6778999999954 5566668999998865 456665 467777999999999887777763 4588 8
Q ss_pred EEEecccccCCcc----c----ccc-----c--cCccEEEEcCcccCcCCCCcEEEEEecCccccCCCCCceeccCCCCc
Q 012991 224 VFVDAAHAMGSIK----I----DVK-----E--IGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMHHPVVSHEFGNGL 288 (452)
Q Consensus 224 ~ivD~a~~~g~~~----~----~~~-----~--~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~ 288 (452)
++.|.|+++=++. . ++- . .+--++..|.+|--+.+.|++++..+++-+.. + ...+...
T Consensus 210 I~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~Nl~~-~-~~~~~~~----- 282 (425)
T PF12897_consen 210 IFWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEANLAW-I-KKHLSVQ----- 282 (425)
T ss_dssp EEEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHH-H-HHHHHHH-----
T ss_pred EEeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHHHHHH-H-HHHhcCc-----
Confidence 9999998765441 1 110 0 12336778999977888889999888776664 1 1111000
Q ss_pred ccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHH----HHHHHHHHHH-Hc---CC-CcCCCcccccceEEE
Q 012991 289 PIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQ----ALKMARMLAN-AW---GT-SLGSPPEICAAMVMV 359 (452)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~----~~~l~~~L~~-~~---~~-~~~~~~~~~~~~~~~ 359 (452)
+=.++-.. .....+++...++|+.+..++..+. .+.+.+.|++ +. ++ +...|.+ +.|+++
T Consensus 283 ------tIgpdKvN---QLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~G--GYFIsl 351 (425)
T PF12897_consen 283 ------TIGPDKVN---QLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKG--GYFISL 351 (425)
T ss_dssp -------S---HHH---HHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SB--SS-EEE
T ss_pred ------eeCccHHH---HHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCC--ceEEEE
Confidence 00111111 2234556664322443333332222 2223334433 22 22 3455555 788888
Q ss_pred EcCCccccCChhhHHHHHHHHhhhcceEeee-cccCC-CCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHH
Q 012991 360 GLPSRLRVMGEDDALRLRGHLRVRFGVEVPI-HYQAP-KDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVI 437 (452)
Q Consensus 360 ~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~-~~~~~-~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~ 437 (452)
... .-.++++.+...+ .||.+.. +..++ +. ...+..|||++++ .+.+|++..++.+.
T Consensus 352 d~~-------~G~AkrvV~lake-AGV~LT~AGAtfPyg~------------DP~D~nIRiAPS~-P~leel~~Am~~~~ 410 (425)
T PF12897_consen 352 DVL-------DGTAKRVVELAKE-AGVALTPAGATFPYGK------------DPRDSNIRIAPSY-PSLEELETAMDVFA 410 (425)
T ss_dssp EES-------TT-HHHHHHHHHH-TTEE---TTTTSGGG--------------TTS-EEEE--SS-S-HHHHHHHHHHHH
T ss_pred ecC-------CChHHHHHHHHHH-hCceeCCCCCCCCCCC------------CCCCCcEEecCCC-CCHHHHHHHHHHHH
Confidence 876 2367888888866 5999844 32221 11 1345689999975 57999999999999
Q ss_pred HHHhccccc
Q 012991 438 LLVEEGQVC 446 (452)
Q Consensus 438 ~~~~~~~~~ 446 (452)
-+++.....
T Consensus 411 ~cv~la~~e 419 (425)
T PF12897_consen 411 TCVKLAAVE 419 (425)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888765544
No 376
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.50 E-value=3.8e-12 Score=117.74 Aligned_cols=343 Identities=15% Similarity=0.141 Sum_probs=199.0
Q ss_pred CcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCC-----CCCcEEEecChhHHHHHHHHHhhcccccC
Q 012991 51 CPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINAD-----DVGEISLVDNATTAAAIVLQQIGRGFTEG 125 (452)
Q Consensus 51 ~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-----~~~~i~~t~g~t~a~~~~~~~l~~~~~~~ 125 (452)
.|..+++.-...+... +++...|+.++++.-+|+.+|+++... +++.|++|.|++.|+..++..+.+
T Consensus 87 fp~Dai~RA~~~L~~~---gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~----- 158 (475)
T KOG0258|consen 87 FPTDAIKRAKRILNDC---GGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIA----- 158 (475)
T ss_pred CCHHHHHHHHHHHHhc---CCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhc-----
Confidence 4444444444444433 333344667788899999999998532 478999999999999999998753
Q ss_pred CCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCc
Q 012991 126 RFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPC 204 (452)
Q Consensus 126 ~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG 204 (452)
.+.+-|+++-|.|+=....+..+ |...+..=+ ...+...+ .++|++.+++.. ..-+++++++-+|.||||
T Consensus 159 --~~~~GvliPiPQYPLYsAti~l~----~~~~v~YyL--dEe~~W~ld~~el~~~~~eA~-k~i~~r~lvvINPGNPTG 229 (475)
T KOG0258|consen 159 --GKKTGVLIPIPQYPLYSATISLL----GGTQVPYYL--DEESNWSLDVAELERSVDEAR-KGINPRALVVINPGNPTG 229 (475)
T ss_pred --CCCCceEeecCCCchhHHHHHHh----CCcccceee--ccccCCCCCHHHHHHHHHHHh-ccCCceEEEEECCCCccc
Confidence 57789999999998765555433 444443322 11222233 788888777554 356889999999999999
Q ss_pred cccc---HHHHHHHHHHcCCCEEEEecccccCCcc-----c-------cccc---cCccEEEE-cCcccCc---CCCCcE
Q 012991 205 VVIP---VRKLVKICRDEGVDQVFVDAAHAMGSIK-----I-------DVKE---IGADFYVS-NLHKWFF---CPPSVA 262 (452)
Q Consensus 205 ~~~~---l~~i~~l~~~~~~~~~ivD~a~~~g~~~-----~-------~~~~---~~~d~~~~-s~~K~l~---g~~G~G 262 (452)
.+.+ +++|..+|+++++ .++.|+++--.... . .+.. ..+-.+++ |.||... |..| |
T Consensus 230 qvls~e~ie~i~~fa~~~~l-~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RG-G 307 (475)
T KOG0258|consen 230 QVLSEENIEGIICFAAEEGL-VLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRG-G 307 (475)
T ss_pred hhhcHHHHHHHHHHHHHcCe-EEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccC-C
Confidence 9975 7789999999999 89999875321110 0 1111 12223333 6778754 3454 5
Q ss_pred EEEE---ecCcccc-------CCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q 012991 263 FLYC---RKSILSS-------DMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQAL 332 (452)
Q Consensus 263 ~l~~---~~~~~~~-------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~ 332 (452)
++=+ .++.... .+..+.. .+--....++.-.+|.+++.. +.. ..+.+.+.++..+.
T Consensus 308 YmEv~n~~prv~~qi~Kl~si~lc~~V~-GQ~~vdl~VnPP~Pgd~Sy~~---------~~~----Ekd~il~~l~~ra~ 373 (475)
T KOG0258|consen 308 YMESLNRDPRVKQQIKKLASIKLCPQVS-GQKLVDLVVNPPKPGDPSYDL---------FSS----EKDGILSSLRSRAK 373 (475)
T ss_pred eeecccCChhHHHHHHHHHhhhhcCCcc-chhhhceecCCCCCCCcchhh---------hhh----hhHhHHHHHHHHhH
Confidence 5432 1222221 0111110 000000111111223333321 112 23556667778888
Q ss_pred HHHHHHHHHcCCCcCCCcccccceEEEEcCCcccc---CChhhHH-HHHHHHhhhcceEeeecccCCCCCCCCCCCCCCC
Q 012991 333 KMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRV---MGEDDAL-RLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDK 408 (452)
Q Consensus 333 ~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~ 408 (452)
.+.+.+..+.|+....+++.+..|--+.+|...-. ..+..++ -.+..|++.-||++.++..++
T Consensus 374 l~~~~~ns~~gi~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFG------------- 440 (475)
T KOG0258|consen 374 LTEDAFNSLEGISCNPVQGAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFG------------- 440 (475)
T ss_pred HHHHHHhhcCceeeccCccceeecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCC-------------
Confidence 89999999988887766653222333345521000 0011222 245566677899998777663
Q ss_pred CCCccc--eEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 409 DGIITG--YARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 409 ~~~~~~--~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
..+| -+|.++-.-. .+-|+++-++=++++++
T Consensus 441 --Q~~GtyH~R~TiLp~~-~~~i~~~~~fH~~f~~~ 473 (475)
T KOG0258|consen 441 --QKEGTYHFRTTILPPG-LEIIEKFKKFHAEFMDE 473 (475)
T ss_pred --CCCceeEEEEeecCch-hHHHHHHHHHHHHHHHh
Confidence 3334 4888875433 35577776666666654
No 377
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.50 E-value=2.3e-12 Score=121.75 Aligned_cols=317 Identities=16% Similarity=0.131 Sum_probs=172.6
Q ss_pred HHHHHHhHhCCCCCCcEEEecChh-HHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeC
Q 012991 85 SRAAVKDLINADDVGEISLVDNAT-TAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQL 163 (452)
Q Consensus 85 ~~~~la~~~~~~~~~~i~~t~g~t-~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~ 163 (452)
+-.-+-+..|+++....++++-+| .++.+++.++.+ -...+.|+.+..+|.|-..++ ..+|.+++.++.
T Consensus 61 l~~d~~~~~G~~~~~~~~~vP~atgm~l~l~l~~l~~------r~~a~~Viw~ridqkSc~kai----~~AGl~~~vV~~ 130 (389)
T PF05889_consen 61 LVLDALRLAGLRSVKSCFVVPMATGMSLTLCLLALRM------RPKAKYVIWPRIDQKSCFKAI----ERAGLEPVVVEN 130 (389)
T ss_dssp HHHHHHHHTTHTTHCEEEEESS-HHHHHHHHHHHHHH------HCT--EEEEEEEETHHHHHHH----HHTT-EEEEE-E
T ss_pred HHHHHHHHcCCccccceEEEecccccHHHHHHHHHhc------ccCCceEEEeeccccchHHHH----HhcCCeEEEeec
Confidence 333444557876444566666655 677777777741 135689999999999887776 456999999864
Q ss_pred CCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCccccc-HHHHHHHHHHcCCCEEEEecccccCCccc-----
Q 012991 164 PFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIP-VRKLVKICRDEGVDQVFVDAAHAMGSIKI----- 237 (452)
Q Consensus 164 ~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~-l~~i~~l~~~~~~~~~ivD~a~~~g~~~~----- 237 (452)
....+.-....+.+++.+++. +....+.++++.+...|...| +++|+++|++||+ +.++-+|+++-....
T Consensus 131 ~~~~d~l~td~~~ie~~i~~~---G~~~iLcvltttscfapr~~D~i~~IakiC~~~~I-PhlvNnAYgvQ~~~~~~~i~ 206 (389)
T PF05889_consen 131 VLEGDELITDLEAIEAKIEEL---GADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDI-PHLVNNAYGVQSSKCMHLIQ 206 (389)
T ss_dssp EEETTEEEEHHHHHHHHHHHH---CGGGEEEEEEESSTTTTB----HHHHHHHHHHHT---EEEEGTTTTT-HHHHHHHH
T ss_pred cCCCCeeeccHHHHHHHHHHh---CCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCC-ceEEccchhhhHHHHHHHHH
Confidence 211111111167777777654 567789999999999999987 9999999999999 799999998822100
Q ss_pred -cccccCccEEEEcCcccCcCCCCcEEEEEec-CccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHH
Q 012991 238 -DVKEIGADFYVSNLHKWFFCPPSVAFLYCRK-SILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSR 315 (452)
Q Consensus 238 -~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~ 315 (452)
-...-..|+++-|..|-|..|.|-+.++... ..+.. ....|+|.-+..+..-+..-+..+..
T Consensus 207 ~a~~~GRvda~vqS~dkNF~VPvGgai~As~~~~~i~~----------------vs~~YpGRas~sp~ld~~itLl~LG~ 270 (389)
T PF05889_consen 207 QAWRVGRVDAFVQSTDKNFMVPVGGAIMASFDPSGILA----------------VSKEYPGRASASPSLDLFITLLSLGC 270 (389)
T ss_dssp HHHHHSTCSEEEEEHHHHHCEESSHEEEEESSHHHHHH----------------HHHTSHSHBTSHHHHHHHHHHHHHHH
T ss_pred HHHhcCCcceeeeecCCCEEecCCCcEEEecCHHHHHH----------------HHHHhhhhhhcccchHHHHHHHHHhh
Confidence 0001134566666666666666644444432 22322 11111222222222112222223332
Q ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHHc---CCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecc
Q 012991 316 FEGGIDGIMQRNHEQALKMARMLANAW---GTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHY 392 (452)
Q Consensus 316 ~~~g~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~ 392 (452)
. |+..+.....+...++.+.|.+.. +-.+...+.+ .-.+.|.++..... ..-+...|...|..+ ||.-..+.
T Consensus 271 ~--g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll~~p~N-~is~a~tl~~l~~~-~~k~~~~lgs~Lf~R-~VsG~RvV 345 (389)
T PF05889_consen 271 T--GYGALLKERKASFPYLKERLKKWAEEVGERLLETPRN-HISMAFTLDTLYEI-SQKDGTFLGSMLFKR-GVSGIRVV 345 (389)
T ss_dssp H--HHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBSSSTT--SSEEEEE-TTCCTC-CSSHHHHHHHHHHHT-TEESSEEE
T ss_pred h--HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCC-CeeEEEECccchhh-ccchhhhHHHHHHhC-Ccccceee
Confidence 2 566666666777777777776532 3233332321 23455565421111 113457888999775 77643322
Q ss_pred cCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 393 QAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
.+...+.. .+. ....-.++-++-....+.+||+.+++.|+++++
T Consensus 346 ~~~~~~~t--sh~---~~yp~~Ylt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 346 TPGGKKQT--SHS---SNYPCPYLTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp ETSSCEEE--TTS---S--SSSEEEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred ccCCCccc--ccC---CCCchHHHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 21111000 000 022346899977777899999999999999875
No 378
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.50 E-value=1.1e-11 Score=119.42 Aligned_cols=358 Identities=13% Similarity=0.052 Sum_probs=201.5
Q ss_pred eEEeccCCCC-CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHh
Q 012991 40 VARINNGSFG-SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQI 118 (452)
Q Consensus 40 ~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l 118 (452)
+|.|-+-+.. .+.+..+++|.. ++.. |.-++.+.++++.+++++|.+ .+++|..|+.+..++...+
T Consensus 43 ~IDLrSDTgT~apS~~m~aAM~~--------GDD~--Y~gdpSv~~Lee~vael~G~E---~alpthqGRgaE~Il~~~~ 109 (467)
T TIGR02617 43 FIDLLTDSGTGAVTQSMQAAMMR--------GDEA--YSGSRSYYALAESVKNIFGYQ---YTIPTHQGRGAEQIYIPVL 109 (467)
T ss_pred EEECccCCCCCCCCHHHHHHHHc--------CCcc--cccCchHHHHHHHHHHHhCCc---eEEECCCCchHHHHHHHhh
Confidence 4455444444 355657777764 2222 223445788999999999994 7889989999988888876
Q ss_pred hcccccCCCC-CCCEEEEeCC----cchhHHHHHHHHHHhcCcEEEEEeCCC------CCCChHHH-HHHHHHHHhcccc
Q 012991 119 GRGFTEGRFH-RNDTVLMLHC----AFQAVKKSIQAYVTRAGGSVVEVQLPF------PLASEEEI-INEFKKGIEKGKK 186 (452)
Q Consensus 119 ~~~~~~~~~~-~g~~Vl~~~~----~~~s~~~~~~~~a~~~g~~v~~~~~~~------~~~~~~~~-~~~l~~~i~~~~~ 186 (452)
+ + +|+++.+... .|..+.......+...|+.++.+..+. +....+.+ ++++++.|+...
T Consensus 110 ~--------~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g- 180 (467)
T TIGR02617 110 I--------KKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVG- 180 (467)
T ss_pred c--------ccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcC-
Confidence 3 4 6676664332 222222211111455688877753321 11123566 999999997431
Q ss_pred CCCceEEEEEecc-CCCCcccccH---HHHHHHHHHcCCCEEEEeccccc-----------CCccccccc------cCcc
Q 012991 187 DGKMIRLAIIDHI-TSMPCVVIPV---RKLVKICRDEGVDQVFVDAAHAM-----------GSIKIDVKE------IGAD 245 (452)
Q Consensus 187 ~~~~~~lv~~~~~-~n~tG~~~~l---~~i~~l~~~~~~~~~ivD~a~~~-----------g~~~~~~~~------~~~d 245 (452)
.+++-.+..+-. |..-|...|+ +++.++|++||+ .+|+|+|--+ +....++.. ..+|
T Consensus 181 -~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GI-plhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aD 258 (467)
T TIGR02617 181 -PNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDI-PVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYAD 258 (467)
T ss_pred -CCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCC-cEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCC
Confidence 122323222222 3335878775 577889999999 7999986311 233333221 2589
Q ss_pred EEEEcCcccCcCCCCcEEEEEecC---ccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHH
Q 012991 246 FYVSNLHKWFFCPPSVAFLYCRKS---ILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDG 322 (452)
Q Consensus 246 ~~~~s~~K~l~g~~G~G~l~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~ 322 (452)
.+++|++|.++.|.| |+++.+++ .+-. -.........|.. ..|..+...+-+++.++.... .+.
T Consensus 259 svt~slsKglgApvG-g~Lag~d~~~~~l~~-~~~~~~i~~EGf~------tYGGlagrd~ea~a~Gl~e~~-----~~~ 325 (467)
T TIGR02617 259 MLAMSAKKDAMVPMG-GLLCFKDDSFFDVYT-ECRTLCVVQEGFP------TYGGLEGGAMERLAVGLYDGM-----NLD 325 (467)
T ss_pred EEEEEcCCCCCCccc-ceEEecchhHHHHHH-HHHhhcccccCCc------CcCchhHHHHHHHHhhhhhcc-----cHH
Confidence 999999999888888 88888876 2211 0111111111111 113233333333333333222 233
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEc----CCccccCChhhHHHHHHHHhhhcceEe-eecccCCCC
Q 012991 323 IMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGL----PSRLRVMGEDDALRLRGHLRVRFGVEV-PIHYQAPKD 397 (452)
Q Consensus 323 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~L~~~~gI~v-~~~~~~~~~ 397 (452)
+.++-....+||.+.|.+. |+.+.. .+ ++-+.+.. |- . .....-+..++-+|..+.||.. ..+....+.
T Consensus 326 yl~~ri~qv~yl~~~L~~~-Gvpi~~-~G--ghav~iDa~~~lph-i-p~~~fpa~al~~~ly~~~GiR~~e~G~~~~~r 399 (467)
T TIGR02617 326 WLAYRINQVQYLVNGLEEI-GVVCQQ-AG--GHAAFVDAGKLLPH-I-PADQFPAHALACELYKVAGIRAVEIGSLLLGR 399 (467)
T ss_pred HHHHHHHHHHHHHHHHHhC-CCcEEe-cC--ccEEEEehhhhCCC-C-ChhhCcHHHHHHHHHHHcCcceEeecceeccc
Confidence 4444567788999999887 887766 43 22333321 10 0 0134567788888887778874 112211110
Q ss_pred CCCCCCCCCCCCCCccceEEecccc-cCCHHHHHHHHHHHHHHHhccc
Q 012991 398 DGQPQAGARDKDGIITGYARISHQV-YNTLEDYEKFRDAVILLVEEGQ 444 (452)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~iRis~~~-~~t~~di~~l~~~l~~~~~~~~ 444 (452)
+. .-... ....-..+|+.+.- .-|.+++|.+++++..+.++..
T Consensus 400 d~--~~~~~--~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~~~ 443 (467)
T TIGR02617 400 DP--KTGKQ--LPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAP 443 (467)
T ss_pred CC--CCCcc--CCCccceeeeccccccccHhHHHHHHHHHHHHHhhhh
Confidence 00 00000 01123579999862 2388999999999999987643
No 379
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.47 E-value=2.6e-11 Score=127.12 Aligned_cols=349 Identities=15% Similarity=0.149 Sum_probs=218.7
Q ss_pred CCCCHHHHHhhhcc---CCC-CeEEeccCCCC-CCcHHHHHHHHHHHHHHhcC-Cchh-hhhhhhHHHHHHHHHHHhHhC
Q 012991 22 RCISEAEIRDEFSH---HQH-GVARINNGSFG-SCPKSVLADQQKWQLKFLQQ-PDDF-YFNSLRKGILESRAAVKDLIN 94 (452)
Q Consensus 22 ~~~~~~~ir~~~~~---~~~-~~~~l~~~~~~-~~p~~v~e~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~la~~~~ 94 (452)
..++..++.+++.. .+. -.-|++.|.++ ..|..+.+.+.+.-..+..+ |-.. -+.+..+.+.+.+..++++.|
T Consensus 59 ~~~sE~e~~~~~~~~a~kN~~~~~fiG~G~y~~~~P~vi~~~i~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtG 138 (954)
T PRK12566 59 AALDEQAALARLRGYAEQNQVWTSLIGMGYHGTVTPTVILRNVLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTG 138 (954)
T ss_pred CCCCHHHHHHHHHHHHhcCCCccccccccccCCcCcHHHHHHHHhCchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhC
Confidence 34566666665432 222 23477777777 56664536654432211111 1110 124455667889999999999
Q ss_pred CCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHH
Q 012991 95 ADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEII 174 (452)
Q Consensus 95 ~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~ 174 (452)
.+ ..+.-+-.++|++-+.++.+.. +. -.+..+|++++..|+.....++-+++..|++++.-
T Consensus 139 m~-vaNASl~D~atA~aEA~~ma~~--~~---~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~~------------- 199 (954)
T PRK12566 139 LD-LANASLLDEATAAAEAMALAKR--VA---KSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVVD------------- 199 (954)
T ss_pred ch-hhhhhhccchhHHHHHHHHHHH--Hh---hcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEEc-------------
Confidence 96 6676777788876665555442 10 01256899999999998888877778888887742
Q ss_pred HHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEeccc--ccCCccccccccCccEEEEcCc
Q 012991 175 NEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAH--AMGSIKIDVKEIGADFYVSNLH 252 (452)
Q Consensus 175 ~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~--~~g~~~~~~~~~~~d~~~~s~~ 252 (452)
++++.+ +.++..|++.+|++ .|.+.++++|.+++|+.|. +++ +++. +++.+ .....+|+|+++.+.+
T Consensus 200 -~~~~~~------~~~~~~v~vq~P~~-~G~i~d~~~i~~~~h~~ga-l~~-~~~d~laL~ll-~~Pge~GADI~vG~~Q 268 (954)
T PRK12566 200 -AVDNLA------AHAVFGALLQYPDT-HGEIRDLRPLIDQLHGQQA-LAC-VAADLLSLLVL-TPPGELGADVVLGSTQ 268 (954)
T ss_pred -chhhcC------CCCEEEEEEECCCC-ceEEccHHHHHHHHHHcCC-EEE-EEeCHHHHhCC-CChhhcCCcEEeeCCC
Confidence 233333 45788999998875 7999999999999999999 644 5443 33333 2345679999988766
Q ss_pred ccC-----cCCCCcEEEEEecCccccCCCCCce---eccC-CC---Cccc----c--cccccccCccccccHHHHH----
Q 012991 253 KWF-----FCPPSVAFLYCRKSILSSDMHHPVV---SHEF-GN---GLPI----E--SAWIGTRDYSAQLVIPSAV---- 310 (452)
Q Consensus 253 K~l-----~g~~G~G~l~~~~~~~~~~l~~~~~---~~~~-~~---~~~~----~--~~~~~~~~~~~~~~~~~al---- 310 (452)
- | +|+++.|++.+++++..+ ++..+ +.+. |. .... + +..-.|.|+....++.+.+
T Consensus 269 ~-fGvp~~~GGP~ag~~a~~~~~~R~--~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y 345 (954)
T PRK12566 269 R-FGVPMGYGGPHAAYFACRDDYKRA--MPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFY 345 (954)
T ss_pred c-CCCCCCCCCCCeeeeeehHHHHhh--CCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHH
Confidence 4 3 334447999999888776 33322 1111 11 0000 0 1223555555444433322
Q ss_pred -HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEee
Q 012991 311 -TFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVP 389 (452)
Q Consensus 311 -~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~ 389 (452)
.++.. +|++++.+++..++.++.+.|.+ .|+++... .+|-.|.+. .+.++.++.+...+ .||-++
T Consensus 346 ~~~~Gp--~Gl~~ia~~~~~~a~~l~~~l~~-~g~~~~~~----~fF~~~~v~------~~~~~~~~~~~a~~-~~~n~r 411 (954)
T PRK12566 346 AVYHGP--EGLKRIAQRVHRLTAILAAGLEA-KGIKRLNR----HFFDTLTLE------VGGAQAAIIESAEA-ARINLR 411 (954)
T ss_pred HHHhCh--HHHHHHHHHHHHHHHHHHHHHHh-cCCccccC----CccceEEEE------ccCCHHHHHHHHHH-CCCeeE
Confidence 22222 37888899999999999999998 58887654 223333332 11135566666545 488886
Q ss_pred ecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHH
Q 012991 390 IHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVI 437 (452)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~ 437 (452)
.. +.+.+.+|+.-.+|.+|++.++.++.
T Consensus 412 ~~--------------------~~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 412 IL--------------------GRGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred Ee--------------------CCCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 32 23579999998899999999999984
No 380
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.47 E-value=4.2e-11 Score=111.99 Aligned_cols=263 Identities=13% Similarity=0.148 Sum_probs=162.6
Q ss_pred CCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCC
Q 012991 48 FGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRF 127 (452)
Q Consensus 48 ~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~ 127 (452)
.++.-+++.+++.+....+ .+....+...+ .-++.+.+.+..+-...+.|.|.++||+|++.++. ++|++..-.
T Consensus 70 ~Ghanpev~ral~~q~~k~---~hs~~~~~t~e-av~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK-~Ark~~~~~- 143 (433)
T KOG1401|consen 70 LGHANPEVARALAEQAKKL---GHSSNGYFTLE-AVELEEVLSAVLGKGSAERVFFCNSGTEANETALK-FARKFTGKK- 143 (433)
T ss_pred cCCCCHHHHHHHHHHHhhh---eeccCccccHH-HHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHH-HHHHhhccc-
Confidence 4555666888888777654 22222233333 55677788888865556899999999999999998 555543211
Q ss_pred CCC--CEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCC---hHH--HHHHHHHHHhccccCCCceEEEEEeccC
Q 012991 128 HRN--DTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLAS---EEE--IINEFKKGIEKGKKDGKMIRLAIIDHIT 200 (452)
Q Consensus 128 ~~g--~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~---~~~--~~~~l~~~i~~~~~~~~~~~lv~~~~~~ 200 (452)
.+. .+||....+|++-..++...+... ....+.+ |... ... ...++++.++.+ ...+.+|+++...
T Consensus 144 ~~~~~t~~Iaf~nsyHG~tlgals~~~~s---~y~~~~~-p~~p~v~~~~ynd~t~l~k~~~~h---~~~IaAVIvEPiq 216 (433)
T KOG1401|consen 144 HPEKKTKFIAFENSYHGRTLGALSVTGNS---KYGLPFD-PIAPDVVTAEYNDSTALEKLFESH---KGEIAAVIVEPIQ 216 (433)
T ss_pred CCccceeEEEEecCcCCcchhHHHhhccc---ccCCCCC-CCCCceeecccCCHHHHHHHHHhC---CCceEEEEEeccc
Confidence 111 359999999988655554322111 1111100 0000 011 168888888754 3458999999988
Q ss_pred CCCccccc----HHHHHHHHHHcCCCEEEEeccccc-CCccc----cccccCccEEEEcCcccCcCCCCcEEEEEecCcc
Q 012991 201 SMPCVVIP----VRKLVKICRDEGVDQVFVDAAHAM-GSIKI----DVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSIL 271 (452)
Q Consensus 201 n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~~-g~~~~----~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~ 271 (452)
-..|.... +..|.++|+++++ ++|.|+++.. |-... .+-...+|+.+.. |.|.|+-.+|...+++++.
T Consensus 217 GaGG~~p~~peFl~~L~k~C~~~~v-l~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t~a--K~L~gGlPigA~~v~~kV~ 293 (433)
T KOG1401|consen 217 GAGGIIPADPEFLIGLRKECDDNGV-LLIFDEVQTGLGRLGYGWAQEYFGVTPDITTVA--KPLGGGLPIGATGVRDKVA 293 (433)
T ss_pred CCCCcccCCHHHHHHHHHHHhhcCc-eEEeehhhhCccccchHHHHHHhCcCCcceeeh--hhccCCceeEEEeehHHHH
Confidence 77777643 5678999999999 8999999863 32211 1222358888877 9887766689999999888
Q ss_pred ccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHH
Q 012991 272 SSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANA 341 (452)
Q Consensus 272 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 341 (452)
+. +..+. . +..|+.....-+++.++..-+.++ .-.+..+++....+.|++.+.+.
T Consensus 294 ~~-i~~~~-------~-----l~hg~Tf~gnpLacsa~~~~l~~l--~~~e~~k~vs~~~k~L~~~l~e~ 348 (433)
T KOG1401|consen 294 EM-ISPGD-------H-----LYHGGTFSGNPLACSAGIKVLDEL--KDPETLKNVSKIGKELRKLLDEY 348 (433)
T ss_pred hh-cCCCC-------c-----cccCcccCCChhhhhHHHHHHHHH--cCHHHHHHHHHHHHHHHHHHHHH
Confidence 76 22111 1 111222222333444454444444 44566777777888888887765
No 381
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.46 E-value=2.2e-12 Score=121.85 Aligned_cols=201 Identities=16% Similarity=0.172 Sum_probs=136.8
Q ss_pred EeccCCCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcc
Q 012991 42 RINNGSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRG 121 (452)
Q Consensus 42 ~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~ 121 (452)
...+.+-+...+++++++...+..+..- .. .........+.......+.++...+.++++++.+.|+.+++.++
T Consensus 30 ~~t~lG~s~~~~e~iea~~~~~~~~v~L-e~--~l~~g~~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al--- 103 (395)
T COG1921 30 LMTNLGRSLYSPEAIEAMKEAMRAPVEL-ET--DLKTGKRGARLTELAELLCGLTGAEAAAIVNNNAAAVLLTLNAL--- 103 (395)
T ss_pred eeccCCCccCCHHHHHHHHHHhccccee-ee--ecccchhhHHHHHHHHHHhcccchhheeeECCcHHHHHHHHhhh---
Confidence 3344455666677999988877653211 11 11111223333333333444443468899999999999998876
Q ss_pred cccCCCCCCCEEEEeC-----CcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEE
Q 012991 122 FTEGRFHRNDTVLMLH-----CAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAI 195 (452)
Q Consensus 122 ~~~~~~~~g~~Vl~~~-----~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~ 195 (452)
..+.+|+++. +.++.+... ++..|++++.+.. .+.- ..+++.+| ++++++++
T Consensus 104 ------~~~~EvVis~g~lV~gg~~~v~d~----~~~aG~~l~EvG~------tn~t~~~d~~~AI------ne~ta~ll 161 (395)
T COG1921 104 ------AEGKEVVVSRGELVEGGAFRVPDI----IRLAGAKLVEVGT------TNRTHLKDYELAI------NENTALLL 161 (395)
T ss_pred ------ccCCeEEEEccccccCCCCChhHH----HHHcCCEEEEecc------cCcCCHHHHHHHh------ccCCeeEE
Confidence 4466666652 345555444 4567999999942 1222 78999999 89999988
Q ss_pred EeccCCCCccc--ccHHHHHHHHHHcCCCEEEEecccccCCcc-c---cccccCccEEEEcCcccCcCCCCcEEEEEecC
Q 012991 196 IDHITSMPCVV--IPVRKLVKICRDEGVDQVFVDAAHAMGSIK-I---DVKEIGADFYVSNLHKWFFCPPSVAFLYCRKS 269 (452)
Q Consensus 196 ~~~~~n~tG~~--~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~-~---~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~ 269 (452)
-.+.+|. |.. .+.++++++||++|+ ++++|.+++..... . ..-+.|+|+|++|++|.|+||. .|+++++++
T Consensus 162 kV~s~~~-~f~~~l~~~~l~~ia~~~~l-pvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllgGPq-aGii~GkKe 238 (395)
T COG1921 162 KVHSSNY-GFTGMLSEEELVEIAHEKGL-PVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLGGPQ-AGIIVGKKE 238 (395)
T ss_pred EEeeccc-cccccccHHHHHHHHHHcCC-CEEEecCCccccccccchhHHHhcCCCEEEEecchhcCCCc-cceEechHH
Confidence 8877764 443 478899999999999 79999987654321 1 2334589999999999877787 699999999
Q ss_pred cccc
Q 012991 270 ILSS 273 (452)
Q Consensus 270 ~~~~ 273 (452)
++++
T Consensus 239 lI~~ 242 (395)
T COG1921 239 LIEK 242 (395)
T ss_pred HHHH
Confidence 9986
No 382
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.45 E-value=1.5e-11 Score=120.23 Aligned_cols=321 Identities=20% Similarity=0.262 Sum_probs=204.3
Q ss_pred hhhhHHHHHHHHHHHhHhCCCCCCcEEEe-cChhHHHHHHHHHhhcccccCCCCCC--CEEEEeCCcchhHHHHHHHHHH
Q 012991 76 NSLRKGILESRAAVKDLINADDVGEISLV-DNATTAAAIVLQQIGRGFTEGRFHRN--DTVLMLHCAFQAVKKSIQAYVT 152 (452)
Q Consensus 76 ~~~~~~~~~~~~~la~~~~~~~~~~i~~t-~g~t~a~~~~~~~l~~~~~~~~~~~g--~~Vl~~~~~~~s~~~~~~~~a~ 152 (452)
.+.+++..++++.+++..|.+ .+.|. ++|.++=..-+. ..|.|.+. ...| ...+++-..|..+.... .
T Consensus 578 qGY~~lf~~Le~~Lc~iTG~D---~~s~QPNsGA~GEYaGL~-~IRaY~~~-kge~hRnvClIPvSAHGTNPASA----~ 648 (1001)
T KOG2040|consen 578 QGYQQLFTELEKDLCEITGFD---SFSLQPNSGAQGEYAGLR-VIRAYLES-KGEGHRNVCLIPVSAHGTNPASA----A 648 (1001)
T ss_pred hhHHHHHHHHHHHhheeeccc---ceeecCCCCcccchhhHH-HHHHHHHh-ccCCcceeEEEeecccCCChhhH----H
Confidence 455778889999999999984 66655 444443222222 23333211 1222 35667888888876654 4
Q ss_pred hcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccc-cHHHHHHHHHHcCCCEEEEeccc
Q 012991 153 RAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVI-PVRKLVKICRDEGVDQVFVDAAH 230 (452)
Q Consensus 153 ~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~-~l~~i~~l~~~~~~~~~ivD~a~ 230 (452)
..|.+++.+ ..+..+.+ ..+|++..+++ .++.++++++.|++ .|++. .++++.++.|+||- -+..|||.
T Consensus 649 MagmkvvpV----~~~~~G~id~~dLk~kaekh---~~~Laa~MvTYPST-~GvfE~~i~d~cd~iHehGG-QVYlDGAN 719 (1001)
T KOG2040|consen 649 MAGMKVVPV----GCDANGNIDMVDLKAKAEKH---KDNLAALMVTYPST-HGVFEEGIDDICDIIHEHGG-QVYLDGAN 719 (1001)
T ss_pred hcCCEEEEe----eccCCCCccHHHHHHHHHHh---hhhhheeEEecccc-cccccccHHHHHHHHHhcCC-EEEecCCC
Confidence 469999988 55677777 88999888875 56788999999987 58875 59999999999999 79999984
Q ss_pred c---cCCccccccccCccEEEEcCcccCcCC-----CCcEEEEEecCccccCC-CCCceeccC-CCCcccc---cccccc
Q 012991 231 A---MGSIKIDVKEIGADFYVSNLHKWFFCP-----PSVAFLYCRKSILSSDM-HHPVVSHEF-GNGLPIE---SAWIGT 297 (452)
Q Consensus 231 ~---~g~~~~~~~~~~~d~~~~s~~K~l~g~-----~G~G~l~~~~~~~~~~l-~~~~~~~~~-~~~~~~~---~~~~~~ 297 (452)
- .|.. ....+|+|+.-..+||+++-| +|.|-+.+++.+... + ..|..+... +...++. ..-.|+
T Consensus 720 MNAqVGlc--~pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapf-LP~HpVvs~~~~~~~~~~gsVsaaP~Gs 796 (1001)
T KOG2040|consen 720 MNAQVGLC--RPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPF-LPSHPVVSPGRPEDTSPVGSVSAAPWGS 796 (1001)
T ss_pred ccceeccc--CCccccccceeecccceeeecCCCCCCCCCccchhhhcccc-CCCCCccCCCCCCCCCCccceeccCCCc
Confidence 2 2322 122347899999999998544 446777777766653 1 112221110 1111111 000111
Q ss_pred cCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHH
Q 012991 298 RDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLR 377 (452)
Q Consensus 298 ~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 377 (452)
..+.+ .-++.++.|.. +|+...-+-..-+++|+.+.|+....+-..++...+..-+++.+.. .+...++.+.+++
T Consensus 797 a~ILp--ISwaYikmMG~--~GL~~as~~AiLNaNYMakRLe~hYkil~~~~~~~vaHEFIlD~r~-fK~~agieavDvA 871 (1001)
T KOG2040|consen 797 ALILP--ISWAYIKMMGS--GGLKDASKIAILNANYMAKRLESHYKILFRGENGLVAHEFILDLRP-FKKTAGIEAVDVA 871 (1001)
T ss_pred ceeeh--hHHHHHHHhcc--cccchhhHHHhhhhHHHHHHHhhccceeEecCCcceeeeeeeechh-hccccCCcHHHHH
Confidence 11111 12345566664 3777777777889999999999864333333333223333333321 1222467888999
Q ss_pred HHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHH
Q 012991 378 GHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLV 440 (452)
Q Consensus 378 ~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~ 440 (452)
+.|. ++|+..|....+ ..+++-|-+.-..+.+|+|+++++|-.+-
T Consensus 872 KRL~-DYgFHaPTmswP-----------------V~gtLMIEPTESE~k~ElDRfcdAliSIr 916 (1001)
T KOG2040|consen 872 KRLM-DYGFHAPTMSWP-----------------VAGTLMIEPTESEDKAELDRFCDALISIR 916 (1001)
T ss_pred HHHH-hccCCCCccccc-----------------cCCceEeccCccccHHHHHHHHHHHHHHH
Confidence 9995 589998766554 35789998887788999999999986654
No 383
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.41 E-value=8.7e-12 Score=120.52 Aligned_cols=287 Identities=15% Similarity=0.221 Sum_probs=168.3
Q ss_pred CCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccc-cC
Q 012991 47 SFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFT-EG 125 (452)
Q Consensus 47 ~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~-~~ 125 (452)
..|...+.+.+++.+.+...... . ......+...++.+.|.+.++.. .+.+.|++||++|++.++... +++. ..
T Consensus 29 ~lGh~~p~i~~ai~~~~~~~~~~--~-~~~~~~~~~~~la~~L~~~~p~~-~~~v~f~~sGseAve~Alkla-~~~~~~~ 103 (339)
T PF00202_consen 29 NLGHNHPEIAEAIAEQANKLNYV--S-FSGFTHPEAAELAEKLAELFPGG-LDRVFFANSGSEAVEAALKLA-RQYHNKR 103 (339)
T ss_dssp TT-BT-HHHHHHHHHHHHHCSSC--S-TTTSEEHHHHHHHHHHHHHSSTT-EEEEEEESSHHHHHHHHHHHH-HHHHHHT
T ss_pred ecCCCccccchhHHHHhhhcccc--c-ccceeccchhhhhhhhhhccccc-cceeeeccCchHHHHHHHHHh-hcccccc
Confidence 55677778999999887653211 1 11223455778888999998543 479999999999999999854 3211 11
Q ss_pred CCCCCCEEEEeCCcchhHHHHHHHHH----HhcC-----cEEEEEeCCCCCCCh-HHH-HHHHHHHHhccccCCCceEEE
Q 012991 126 RFHRNDTVLMLHCAFQAVKKSIQAYV----TRAG-----GSVVEVQLPFPLASE-EEI-INEFKKGIEKGKKDGKMIRLA 194 (452)
Q Consensus 126 ~~~~g~~Vl~~~~~~~s~~~~~~~~a----~~~g-----~~v~~~~~~~~~~~~-~~~-~~~l~~~i~~~~~~~~~~~lv 194 (452)
......+|+....+|++.......+. .+.+ ..+..+|.+.+..++ ... .+.+++.+.+.. .+++.+|
T Consensus 104 ~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~iaav 181 (339)
T PF00202_consen 104 AYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALN--ADEIAAV 181 (339)
T ss_dssp HHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHH--GGGEEEE
T ss_pred cccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhc--CCcEEEE
Confidence 12345699999999887543332210 0011 234556543211100 111 333444333211 4678999
Q ss_pred EEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc----ccccccCccEEEEcCcccCcCCCCcEEEE
Q 012991 195 IIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK----IDVKEIGADFYVSNLHKWFFCPPSVAFLY 265 (452)
Q Consensus 195 ~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~l~g~~G~G~l~ 265 (452)
+++......|...+ +++|.++|++||+ ++|+|+++. +|-.. .+.....+|+++++ |.+.|+..+|.++
T Consensus 182 ivEPi~g~~G~~~~~~~~l~~l~~lc~~~gi-llI~DEV~tG~gRtG~~~a~~~~gv~PDiv~~g--K~l~gG~p~sav~ 258 (339)
T PF00202_consen 182 IVEPIQGEGGMIPPPPEYLRELRELCREHGI-LLIADEVQTGFGRTGKFFASEHYGVDPDIVTFG--KGLGGGLPISAVL 258 (339)
T ss_dssp EEESSBTTTTSBEE-TTHHHHHHHHHHHTT--EEEEEETTTTTTTTSSSSGHHHHTSSSSEEEEE--GGGGTTSSEEEEE
T ss_pred EEeccccccCccccccchhhehccccccccc-ceecccccccccccCCccceecccccCcccccc--cchhhhhhccccc
Confidence 99998888887764 6899999999999 899999986 33221 22334468999997 9988777789999
Q ss_pred EecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcC-C
Q 012991 266 CRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWG-T 344 (452)
Q Consensus 266 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~-~ 344 (452)
+++++.+. + .+.. ...++.+ +..+..+..+.++.+++ +.+.+++.++.+++.+.|.++.. .
T Consensus 259 ~~~~i~~~-~-~~~~---------~~~T~~g--~p~~~aaa~~~l~~~~~-----~~~~~~~~~~g~~l~~~L~~l~~~~ 320 (339)
T PF00202_consen 259 GSEEIMEA-F-QPGS---------HGSTFGG--NPLSCAAALATLEILEE-----EDLLERVRELGERLREGLRELAARY 320 (339)
T ss_dssp EEHHHHTT-S-CTTS---------STCTTTT---HHHHHHHHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccchhhcc-c-cccc---------ccccccc--chHhhhhhhhHHHhhcc-----HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99988875 1 1110 0111111 11222333344555553 34567778888888888876532 1
Q ss_pred CcCCCcccccceEEEEc
Q 012991 345 SLGSPPEICAAMVMVGL 361 (452)
Q Consensus 345 ~~~~~~~~~~~~~~~~~ 361 (452)
.++......+.++.+.+
T Consensus 321 ~~i~~vrg~Gl~~~ie~ 337 (339)
T PF00202_consen 321 PLIGEVRGIGLMIGIEL 337 (339)
T ss_dssp TTEEEEEEETTEEEEEE
T ss_pred CCeEEEeeeCeEEEEEE
Confidence 22222223355555544
No 384
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.39 E-value=2.3e-13 Score=127.50 Aligned_cols=199 Identities=14% Similarity=0.235 Sum_probs=42.5
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhcCCch-h--hhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhccc
Q 012991 46 GSFGSCPKSVLADQQKWQLKFLQQPDD-F--YFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGF 122 (452)
Q Consensus 46 ~~~~~~p~~v~e~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~ 122 (452)
-+-.+.++++.+++.+....+.. ... . ..++ .-+..+.+.++.+.|++ ..+++++..+|+.+++.++
T Consensus 13 LGRs~l~~~a~~a~~~~a~~Y~n-LE~dl~~G~Rg--~R~~~v~~ll~~ltgAe---aA~VvNnnaAAv~L~l~~l---- 82 (367)
T PF03841_consen 13 LGRSPLSEEAIEAVAEVASGYSN-LEYDLETGKRG--SRYAHVEELLCELTGAE---AALVVNNNAAAVLLALNTL---- 82 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccc-ccccccccccc--ccccccccccccccccc---ccccccccccccccccccc----
Confidence 33456677788888766544311 111 0 0011 11455777889999884 6677787788999998876
Q ss_pred ccCCCCCCCEEEEeCCcchhHHHHHH--HHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEecc
Q 012991 123 TEGRFHRNDTVLMLHCAFQAVKKSIQ--AYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHI 199 (452)
Q Consensus 123 ~~~~~~~g~~Vl~~~~~~~s~~~~~~--~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~ 199 (452)
..+.+|+++..+-..+...|+ .+.+..|++++++-. . ..- +++++++| +++|++++..|.
T Consensus 83 -----a~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGt----t--N~t~~~Dye~AI------~e~Ta~ll~Vh~ 145 (367)
T PF03841_consen 83 -----AKGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGT----T--NRTHLSDYEKAI------TENTAALLKVHT 145 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----cccccccccccccccccccccccccccccccccccccc----c--cccccccccccc------cccccccccccc
Confidence 567899998776554443332 223667899988842 2 222 78999999 899999999887
Q ss_pred CCC--Cccc--ccHHHHHHHHHHcCCCEEEEeccccc-------C--Ccc--ccccccCccEEEEcCcccCcCCCCcEEE
Q 012991 200 TSM--PCVV--IPVRKLVKICRDEGVDQVFVDAAHAM-------G--SIK--IDVKEIGADFYVSNLHKWFFCPPSVAFL 264 (452)
Q Consensus 200 ~n~--tG~~--~~l~~i~~l~~~~~~~~~ivD~a~~~-------g--~~~--~~~~~~~~d~~~~s~~K~l~g~~G~G~l 264 (452)
+|. .|.. .+++++++++|+|++ ++++|..++. | ..+ .+.-+.|+|++++|+.|.|+||. .|++
T Consensus 146 Sn~~i~GFt~~~~~~el~~la~~~~l-p~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ-aGiI 223 (367)
T PF03841_consen 146 SNFRIQGFTGEVSLEELAELAKEHGL-PVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQ-AGII 223 (367)
T ss_dssp ---------------HHHHHHHHHT---EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S--EEE
T ss_pred cccccccccccccHHHHHHHHhhcCC-cEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCC-eEEE
Confidence 775 3433 489999999999999 7999976532 1 111 12345689999999999777777 6999
Q ss_pred EEecCcccc
Q 012991 265 YCRKSILSS 273 (452)
Q Consensus 265 ~~~~~~~~~ 273 (452)
+.+++++++
T Consensus 224 ~Gkk~lI~~ 232 (367)
T PF03841_consen 224 VGKKELIEK 232 (367)
T ss_dssp EEEHHHHHH
T ss_pred EeCHHHHHH
Confidence 999999987
No 385
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=99.32 E-value=2.2e-10 Score=102.61 Aligned_cols=360 Identities=14% Similarity=0.169 Sum_probs=211.4
Q ss_pred hhccCCCCeEEec----cCCCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecCh
Q 012991 32 EFSHHQHGVARIN----NGSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNA 107 (452)
Q Consensus 32 ~~~~~~~~~~~l~----~~~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~ 107 (452)
.|.....+.-||+ .+-.+...++|.++....+.....+. + .-.+++.+-+++..+.+=++ +.++|++||
T Consensus 39 QYmfDE~g~~yLDCInNVaHvghchp~VV~A~~kQmat~~tN~-R---Flhd~lv~cA~~l~stlPeL---svc~F~NSG 111 (452)
T KOG1403|consen 39 QYMFDEEGTRYLDCINNVAHVGHCHPEVVRAGAKQMATISTNN-R---FLHDELVQCARTLTSTLPEL---SVCFFVNSG 111 (452)
T ss_pred ceeeccCcccHHHHhhhhhhcccCCHHHHHHHHHHHhHhcccc-h---hhHHHHHHHHHHHhhcCCCc---eEEEEecCC
Confidence 3554445555553 22345556668888777766543321 1 12244555555555555443 688999999
Q ss_pred hHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhc---C---cEEEEEe---CCC-----------CC
Q 012991 108 TTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRA---G---GSVVEVQ---LPF-----------PL 167 (452)
Q Consensus 108 t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~---g---~~v~~~~---~~~-----------~~ 167 (452)
++|+.++++ |+|.| .....|++.+..|++.......++... | .++.++. .++ +.
T Consensus 112 SEANDLALR-LAR~f-----tkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~ 185 (452)
T KOG1403|consen 112 SEANDLALR-LARNF-----TKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPD 185 (452)
T ss_pred chhhHHHHH-HHHhh-----cccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCc
Confidence 999999998 55543 555667777777777655543332111 1 1222222 110 11
Q ss_pred CChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCccccc----HHHHHHHHHHcCCCEEEEecccc-cCCcc-----
Q 012991 168 ASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIP----VRKLVKICRDEGVDQVFVDAAHA-MGSIK----- 236 (452)
Q Consensus 168 ~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ivD~a~~-~g~~~----- 236 (452)
.+.+.. .+.+++.++..-..+...++++.++..+--|.++| .+.+++..+.+|- ++|+|+++- +|-+.
T Consensus 186 a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGG-v~IaDEVQvGFGRvG~hyWa 264 (452)
T KOG1403|consen 186 ADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGG-VCIADEVQVGFGRVGSHYWA 264 (452)
T ss_pred ccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCC-eEEeehhhhcccccchhhhh
Confidence 112233 66777766543333556778888888888999987 5678888899998 799999873 44332
Q ss_pred ccccccCccEEEEcCcccCcCCCCcEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHh
Q 012991 237 IDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRF 316 (452)
Q Consensus 237 ~~~~~~~~d~~~~s~~K~l~g~~G~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~ 316 (452)
+.....-+|+++.. |-++.+..++++...+++.+. + ... +..+-.++.|+|.. .+.++..+...
T Consensus 265 fq~y~fiPDIVtmg--KpmGNGhPVa~VattkeIA~A-f-~at-------gv~YFNTyGGnPVs-----CAv~laVm~v~ 328 (452)
T KOG1403|consen 265 FQTYNFIPDIVTMG--KPMGNGHPVAAVATTKEIAQA-F-HAT-------GVEYFNTYGGNPVS-----CAVGLAVMRVC 328 (452)
T ss_pred hhhhccccchheec--ccCCCCCeeeEEeccHHHHHH-h-ccc-------cceehhccCCCchh-----HHHHHHHHHHH
Confidence 22223457888887 776666668998888888775 2 110 11111112233332 23345555543
Q ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHcC-CCcCCCcccccceEEEEcCC-c-cccCChhhHHHHHHHHhhhcceEeeeccc
Q 012991 317 EGGIDGIMQRNHEQALKMARMLANAWG-TSLGSPPEICAAMVMVGLPS-R-LRVMGEDDALRLRGHLRVRFGVEVPIHYQ 393 (452)
Q Consensus 317 ~~g~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~l~~~L~~~~gI~v~~~~~ 393 (452)
.-+.+.++.+....+|...|.++.. .+.++.....+-|+-+.+-. . ....+...+..+...|.+.++|.+...
T Consensus 329 --e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaD-- 404 (452)
T KOG1403|consen 329 --EDENLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSAD-- 404 (452)
T ss_pred --hhhhHHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecC--
Confidence 4567788888888888888876532 34455444445555555421 1 111222345567788888888888421
Q ss_pred CCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 394 APKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
+...+.+.|-+..--++++.+.++..|.+++.
T Consensus 405 ----------------GPh~NilKiKPPmCFneena~e~v~~ld~iLT 436 (452)
T KOG1403|consen 405 ----------------GPHRNILKIKPPMCFNEENADEFVLGLDEILT 436 (452)
T ss_pred ----------------CCCCceeecCCCcccChhhHHHHHHHHHHHHH
Confidence 34467888876433367777777777777663
No 386
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.20 E-value=1.9e-09 Score=100.23 Aligned_cols=170 Identities=19% Similarity=0.266 Sum_probs=112.8
Q ss_pred hHHHHHHHHHHHhHhCCCCCCcEEEe--cChhHHHHHHHHHhhcccccCCCCCCCEEEEeC-CcchhHHHHHHHH-----
Q 012991 79 RKGILESRAAVKDLINADDVGEISLV--DNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLH-CAFQAVKKSIQAY----- 150 (452)
Q Consensus 79 ~~~~~~~~~~la~~~~~~~~~~i~~t--~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~-~~~~s~~~~~~~~----- 150 (452)
+.+.+.+.+-.|+.|+++ +.++=. .|||+|+.+++.++ ++|||+++... .-|......+..-
T Consensus 53 D~GRd~le~iyA~vfgaE--~ALVRpq~vSGTHAi~~~Lfg~--------LrpGD~ll~~tG~PYDTL~~VIG~~g~~~G 122 (403)
T PF06838_consen 53 DIGRDKLERIYADVFGAE--DALVRPQFVSGTHAIALALFGV--------LRPGDELLSITGKPYDTLEEVIGIRGNGPG 122 (403)
T ss_dssp -HHHHHHHHHHHHHCT-S--EEEEETTS-SHHHHHHHHHHHH----------TT-EEEESSSS--CCHHHHHTSSSSSSS
T ss_pred CccHHHHHHHHHHHhCch--hhhhcccccchHHHHHHHHHhc--------CCCCCeEEEcCCCchhhHHHHhCCCCCCCC
Confidence 557788999999999995 444432 58999999999987 79999999653 3454443333210
Q ss_pred -HHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCccc----c---cHHHHHHHHHHc--
Q 012991 151 -VTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVV----I---PVRKLVKICRDE-- 219 (452)
Q Consensus 151 -a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~----~---~l~~i~~l~~~~-- 219 (452)
-...|+++..++ ..+++.+ .+.+++++ ++++++|++.-- .|.- + +++++.+++|+.
T Consensus 123 SL~e~Gi~Y~~v~----L~~dg~~D~~~i~~~~------~~~tk~v~IQRS---rGYs~R~sl~i~~I~~~i~~vk~~~p 189 (403)
T PF06838_consen 123 SLKEFGIKYREVP----LTEDGTIDWEAIKKAL------KPNTKMVLIQRS---RGYSWRPSLTIEEIKEIIKFVKEINP 189 (403)
T ss_dssp STGGGT-EEEE------B-TTSSB-HHHHHHHH------HTTEEEEEEE-S----TTSSS----HHHHHHHHHHHHHH-T
T ss_pred ChHHhCceeEEEe----ecCCCCcCHHHHHHhh------ccCceEEEEecC---CCCCCCCCCCHHHHHHHHHHHHhhCC
Confidence 022378999994 4555555 89999999 578999999643 3432 2 345555555654
Q ss_pred CCCEEEEecccccCCccccccccCccEEEEcCcccCcC---CCCcEEEEEecCcccc
Q 012991 220 GVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFC---PPSVAFLYCRKSILSS 273 (452)
Q Consensus 220 ~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g---~~G~G~l~~~~~~~~~ 273 (452)
++ +++||.+++-..-.......|+|++..|+-|..+| |.| |+++.++++++.
T Consensus 190 ~~-iifVDNCYGEFvE~~EP~~vGADl~aGSLIKNpGGgiAptG-GYIaGr~~lVe~ 244 (403)
T PF06838_consen 190 DV-IIFVDNCYGEFVETQEPTEVGADLMAGSLIKNPGGGIAPTG-GYIAGRKDLVER 244 (403)
T ss_dssp TS-EEEEE-TTTTTTSSS-GGGGT-SEEEEETTSGGGTTT-SS--EEEEESHHHHHH
T ss_pred Ce-EEEEeCCcceeccccCccccchhheeccceeCCCCCccCcC-CEEechHHHHHH
Confidence 68 89999999987777777788999999999998765 454 899999999986
No 387
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.06 E-value=1.4e-07 Score=87.10 Aligned_cols=364 Identities=15% Similarity=0.117 Sum_probs=204.6
Q ss_pred eccCCCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhccc
Q 012991 43 INNGSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGF 122 (452)
Q Consensus 43 l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~ 122 (452)
|.-.+++.+....+.+|-.--+.+ .-+..+..+..++.+.||.. .++-|.-|-.|=++....+.+.
T Consensus 52 LTDSGTgams~~qwaamm~GDEAY----------agsrs~~~L~~avkdifGfq---~~iPthQGRgAE~Il~~i~ik~- 117 (471)
T COG3033 52 LTDSGTGAMTDKQWAAMMRGDEAY----------AGSRSYYALADAVKDIFGFQ---YTIPTHQGRGAENILIPILIKK- 117 (471)
T ss_pred eccCCcccccHHHHHHHhccchhh----------cccccHHHHHHHHHHhcCce---eeeeccCCccHHHHHHHHHhhh-
Confidence 344456666665665554322211 11222566788899999983 6666766666655555544331
Q ss_pred ccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCCh------HHH-HHHHHHHHhccccCCCceEEEE
Q 012991 123 TEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASE------EEI-INEFKKGIEKGKKDGKMIRLAI 195 (452)
Q Consensus 123 ~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~------~~~-~~~l~~~i~~~~~~~~~~~lv~ 195 (452)
+...+|.+.+.++..|.-...+- ....|+.++-+.++...+.+ +.+ ++.|++.|++.. .+++..|+
T Consensus 118 --~~~~pg~~~~~~sN~~FdTTr~h---~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG--~~nvp~I~ 190 (471)
T COG3033 118 --GEQEPGSKMVAFSNYHFDTTRGH---IQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVG--ADNVPYIV 190 (471)
T ss_pred --ccccCCccccccccceecchhHH---HHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhC--cccCcEEE
Confidence 24567777777777776655444 34568777777664332222 445 899999997542 22343443
Q ss_pred Ee-ccCCCCccccc---HHHHHHHHHHcCCCEEEEeccccc-----------CCcccccccc------CccEEEEcCccc
Q 012991 196 ID-HITSMPCVVIP---VRKLVKICRDEGVDQVFVDAAHAM-----------GSIKIDVKEI------GADFYVSNLHKW 254 (452)
Q Consensus 196 ~~-~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD~a~~~-----------g~~~~~~~~~------~~d~~~~s~~K~ 254 (452)
.+ ..|+..|.-.+ ++++.+||++|++ +++.|++-.. |.....+... .+|-++.|.-|=
T Consensus 191 ~tiT~NsagGQpVSm~n~r~v~~ia~ky~i-pvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD 269 (471)
T COG3033 191 LTITNNSAGGQPVSMANMKAVYEIAKKYDI-PVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKD 269 (471)
T ss_pred EEEeccccCCCcchHHhHHHHHHHHHHcCC-cEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeecccc
Confidence 33 33445666544 6789999999999 7999976321 1112221111 478899999996
Q ss_pred CcCCCCcEEEEEecCcc----ccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHH
Q 012991 255 FFCPPSVAFLYCRKSIL----SSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQ 330 (452)
Q Consensus 255 l~g~~G~G~l~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~ 330 (452)
-...-| |+++.+++-. .. . .....-+.|... .|......+-+++.++..-. ..+- .++-.+.
T Consensus 270 ~lvnmG-Gfl~~~D~~~fDvy~~-~-~~~~V~~eG~~t------YGgl~GrdmealAvGL~e~~----~~~y-l~~Rv~Q 335 (471)
T COG3033 270 GLVNMG-GFLCFKDDSFFDVYEE-C-RTLVVVQEGFPT------YGGLAGRDMEALAVGLREGV----NFDY-LAHRVAQ 335 (471)
T ss_pred ceeccc-cEEEecCccHHHHHHH-H-HhheEeeccccc------cCcccchhHHHHHHHHHHhc----CcHH-HHHHHHH
Confidence 555665 8999987732 21 1 111111111110 12233333333444443322 2333 3444677
Q ss_pred HHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccc--cCChhhHHHHHHHHhhhcceEeee-cccCCCCCCCCCCCCCC
Q 012991 331 ALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLR--VMGEDDALRLRGHLRVRFGVEVPI-HYQAPKDDGQPQAGARD 407 (452)
Q Consensus 331 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~L~~~~gI~v~~-~~~~~~~~~~~~~~~~~ 407 (452)
.+||.+.|.+. |+++..|.+. +-+.+...+-+- ..+...++.++-.|..+.||...- +....+.+ ..-..+
T Consensus 336 v~YL~~~l~~~-GVpi~~paGG--Havfvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd--~ktg~q- 409 (471)
T COG3033 336 VQYLADGLEEA-GVPIVQPAGG--HAVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRD--PKTGKQ- 409 (471)
T ss_pred HHHHHHHHHhc-CCeeEecCCC--ceEEeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccC--CCcccc-
Confidence 89999999988 8888777663 333333211000 012456777888887778998632 21111100 000000
Q ss_pred CCCCccceEEeccccc-CCHHHHHHHHHHHHHHHhcccccccc
Q 012991 408 KDGIITGYARISHQVY-NTLEDYEKFRDAVILLVEEGQVCQML 449 (452)
Q Consensus 408 ~~~~~~~~iRis~~~~-~t~~di~~l~~~l~~~~~~~~~~~~~ 449 (452)
....-..+|+.+.-. -|.+++|.++++++++.++++.-+-|
T Consensus 410 -~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~~~~ikgL 451 (471)
T COG3033 410 -HPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKENAEDIKGL 451 (471)
T ss_pred -CCCchheeeEeccccccchhHHHHHHHHHHHHHhccccCCCc
Confidence 012235799998632 37899999999999999987644333
No 388
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.82 E-value=4e-08 Score=90.87 Aligned_cols=273 Identities=12% Similarity=0.056 Sum_probs=139.3
Q ss_pred CCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHH
Q 012991 98 VGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEF 177 (452)
Q Consensus 98 ~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l 177 (452)
.-.|+|++|+|+.++.++.+|.... ..-.+.-.|+...|-|++.......+ + ....++.. |. ..+
T Consensus 66 gr~IV~GtGsTQL~~AalyALSp~~--~~~~~p~~VVa~aPYY~~Y~~qt~~f-~--s~~y~w~G-----da-----~~~ 130 (363)
T PF04864_consen 66 GRYIVFGTGSTQLFNAALYALSPNA--SPSSSPASVVAAAPYYSSYPEQTDFF-D--SRLYKWAG-----DA-----SNF 130 (363)
T ss_dssp TSEEEEECHHHHHHHHHHHHHCHHT---TTSSSEEEEE-SS--CHHHHHCCCT----BTTEEEEE-----EC-----CCG
T ss_pred CcEEEEcCCHHHHHHHHHHhcCCCC--CCCCCCceeEecCCCccchHHHHHhc-c--ccCccccc-----cH-----Hhh
Confidence 4689999999999999999994310 00112237888888888764443332 1 11223321 10 000
Q ss_pred HHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCc-cccccccCccEEEEcCcccCc
Q 012991 178 KKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSI-KIDVKEIGADFYVSNLHKWFF 256 (452)
Q Consensus 178 ~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~-~~~~~~~~~d~~~~s~~K~l~ 256 (452)
. .. .+..+-+=++++||||.|.+-. .+++.-+. .+|.|-|+..++. |+.. ..+-|++.++.+| +.
T Consensus 131 ~---~~---~~~~~~IElVTSPNNPDG~lr~-----~V~~g~~~-k~I~D~AYYWPhyTpI~~-~aD~DiMLFT~SK-~T 196 (363)
T PF04864_consen 131 K---NS---DNPSPYIELVTSPNNPDGQLRE-----AVLNGSSG-KVIHDLAYYWPHYTPITA-PADHDIMLFTLSK-LT 196 (363)
T ss_dssp T---T----S-CCGEEEEEESS-TTT-----------SSTTTEE-EEEEE-TT-STTTS---S--B--SEEEEEHHH-HC
T ss_pred c---cC---CCCCCeEEEEeCCCCCcccccc-----hhcCCCCc-ceeeeeeeecccccccCC-CCCCceEEEEEec-cc
Confidence 0 00 0345667799999999998721 12244456 6899999998875 3332 3356999999999 47
Q ss_pred CCCC--cEEEEEecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhc--C--------HHHHH
Q 012991 257 CPPS--VAFLYCRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEG--G--------IDGIM 324 (452)
Q Consensus 257 g~~G--~G~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~--g--------~~~~~ 324 (452)
|=.| +|+.+++++.+.+ .+..+. ...|.-.. .-+...+++.+..+.+ + ++--+
T Consensus 197 GHAGSR~GWAlVKD~~Va~-kM~~y~-------------~lnTiGvS-~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~ 261 (363)
T PF04864_consen 197 GHAGSRFGWALVKDEEVAK-KMTKYM-------------ELNTIGVS-RDSQLRALKILKVVLDGYGTEKGTEDIFHFGY 261 (363)
T ss_dssp S-GGG-EEEEEES-HHHHH-HHHHHH-------------HHHCSS---HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHH
T ss_pred CccccccceeeecCHHHHH-HHHHHH-------------HHhcccCc-HHHHHHHHHHHHHHHhcccCCCCccchHHHHH
Confidence 6666 8999998876654 111121 01111111 1111123333332100 1 11122
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcC--CCc---------ccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeeccc
Q 012991 325 QRNHEQALKMARMLANAWGTSLG--SPP---------EICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQ 393 (452)
Q Consensus 325 ~~~~~~~~~l~~~L~~~~~~~~~--~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~ 393 (452)
+..+++...|.+.+.+...+.+. .|+ .....+.|++... . ...+-.+.|+ +.||.-+.+..
T Consensus 262 ~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~------e-ed~DC~~~l~-~~~I~tr~G~~ 333 (363)
T PF04864_consen 262 STMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCER------E-EDEDCYAVLR-EAKIITRSGVL 333 (363)
T ss_dssp HHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESS------C-GGSSHHHHHH-CTTEEEEEGGG
T ss_pred HHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCC------c-ccccHHHHHH-hCCcccCCCCc
Confidence 33344445555555443223332 111 1235677877641 1 1234556665 46999998887
Q ss_pred CCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHH
Q 012991 394 APKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILL 439 (452)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~ 439 (452)
+. ....++|+|+-- +++|.+.|++.|..+
T Consensus 334 fg---------------a~~ryVRlSml~--~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 334 FG---------------ADSRYVRLSMLK--RDDDFDQLLERLSKL 362 (363)
T ss_dssp GT---------------S-TTEEEEESSS---HHHHHHHHHHHHCC
T ss_pred cC---------------CCCCeEEEeccC--CHHHHHHHHHHHHhh
Confidence 73 456799999974 889999999999764
No 389
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.79 E-value=1.4e-06 Score=79.03 Aligned_cols=293 Identities=15% Similarity=0.173 Sum_probs=166.4
Q ss_pred HHHHHHHHHHhH-hCCCC----CCcE--EEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 81 GILESRAAVKDL-INADD----VGEI--SLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 81 ~~~~~~~~la~~-~~~~~----~~~i--~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
+....++..+++ +|.+. .+.+ +.+-|||.|+.+.+.-+.+ +-+...|.++.|.|.++...| +.
T Consensus 75 Gl~~F~~~A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~------~~~~~~VY~SnPTW~nH~~if----~~ 144 (410)
T KOG1412|consen 75 GLPTFTKAATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLAT------FYNKNTVYVSNPTWENHHAIF----EK 144 (410)
T ss_pred CchhhhhhhHHHhcCCCchhhhhccccceeeccccchhhhhHHHHHH------hcccceeEecCCchhHHHHHH----HH
Confidence 345566666664 44331 2332 5567899999999887754 234567999999999876666 44
Q ss_pred cC-cEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEec-cCCCCccccc---HHHHHHHHHHcCCCEEEEe
Q 012991 154 AG-GSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDH-ITSMPCVVIP---VRKLVKICRDEGVDQVFVD 227 (452)
Q Consensus 154 ~g-~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~-~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD 227 (452)
.| .++...+. |..+. ..+ ++.+...|+.. .+. .++++.. .+||||.=.. ..+|++..++.+. +.+.|
T Consensus 145 aGf~tv~~Y~y-Wd~~~-k~~d~e~~Lsdl~~A---Pe~-si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~l-f~fFD 217 (410)
T KOG1412|consen 145 AGFTTVATYPY-WDAEN-KCVDLEGFLSDLESA---PEG-SIIILHACAHNPTGMDPTREQWKQIADVIKSKNL-FPFFD 217 (410)
T ss_pred cCCceeeeeee-ecCCC-ceecHHHHHHHHhhC---CCC-cEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCc-eeeee
Confidence 57 34544532 22221 223 67777777542 222 3444444 4999997543 4578888888898 78999
Q ss_pred ccc-ccCCcccccccc--------Cc-cEEEEcCcccCcCCCC--cEEEEE---ecCccccCCCCCceeccCCCCccccc
Q 012991 228 AAH-AMGSIKIDVKEI--------GA-DFYVSNLHKWFFCPPS--VAFLYC---RKSILSSDMHHPVVSHEFGNGLPIES 292 (452)
Q Consensus 228 ~a~-~~g~~~~~~~~~--------~~-d~~~~s~~K~l~g~~G--~G~l~~---~~~~~~~~l~~~~~~~~~~~~~~~~~ 292 (452)
-|+ ++..-+++.+.| +. -|++-||.|- +|.++ +|.+.+ ++..+.. +..... . ..+
T Consensus 218 iAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKN-fGlYneRvGnltvv~~n~a~i~~-v~SQl~-------l-viR 287 (410)
T KOG1412|consen 218 IAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKN-FGLYNERVGNLTVVVNNPAVIAG-VKSQLT-------L-VIR 287 (410)
T ss_pred hhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhh-cccccccccceEEEecChhHHHH-HHHHHH-------H-HHh
Confidence 764 433333433332 33 3566699996 77777 664433 2333222 100000 0 000
Q ss_pred ccccccCccccccHHHH---H---HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHc--C-CC-cCCCcccccceEEEEcC
Q 012991 293 AWIGTRDYSAQLVIPSA---V---TFVSRFEGGIDGIMQRNHEQALKMARMLANAW--G-TS-LGSPPEICAAMVMVGLP 362 (452)
Q Consensus 293 ~~~~~~~~~~~~~~~~a---l---~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~--~-~~-~~~~~~~~~~~~~~~~~ 362 (452)
++-+..+.++...+ + +..+++...++.+-.|+++++..|++.|..+. | |. +. +..+++.+
T Consensus 288 ---~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI~----~QiGMFSy--- 357 (410)
T KOG1412|consen 288 ---SNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHIT----QQIGMFSY--- 357 (410)
T ss_pred ---hccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHH----hhccceee---
Confidence 11111122222221 1 12222222467888889999999999998762 2 11 11 22456555
Q ss_pred CccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 363 SRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 363 ~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
++.++.++ +.|.+++.|++- ..| ||+++..| ...+|.+.+++.+.+..
T Consensus 358 ------TGLtp~qV-~~li~~h~vyLl----------------------~~G--RInisGLN-~~NveyVAkAIde~Vr~ 405 (410)
T KOG1412|consen 358 ------TGLTPAQV-DHLIENHKVYLL----------------------SDG--RINISGLN-MKNVEYVAKAIDETVRA 405 (410)
T ss_pred ------cCCCHHHH-HHHHHhceEEEe----------------------cCC--cEeeeccc-cccHHHHHHHHHHHHHh
Confidence 46777666 555566899873 223 77776654 56688888888888764
No 390
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.75 E-value=1.7e-07 Score=92.55 Aligned_cols=292 Identities=17% Similarity=0.194 Sum_probs=183.9
Q ss_pred HHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEE
Q 012991 82 ILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEV 161 (452)
Q Consensus 82 ~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~ 161 (452)
+...+..++++.|.+ ..+.-+---||+|-+.++.+. ...++.+++++...|+.....+.-.++..|+++...
T Consensus 165 llNyQTmi~dlTGL~-~aNASLLDEgTAaaEAm~l~~-------~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~ 236 (1001)
T KOG2040|consen 165 LLNYQTMITDLTGLP-MANASLLDEGTAAAEAMALCN-------RINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVS 236 (1001)
T ss_pred HhhhHHhhhhccCCc-ccchhhhccchhHHHHHHHHH-------hhcccceEEecCCCCcchhhhhhccccccceeEEec
Confidence 445678899999997 667766666776666666654 346677899999999988777765455555554433
Q ss_pred eCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecc-cccCCcccccc
Q 012991 162 QLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAA-HAMGSIKIDVK 240 (452)
Q Consensus 162 ~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a-~~~g~~~~~~~ 240 (452)
++ +++... .++...|++..|.+ .|.+.|..++++.+++.+. ++++-.- -++ .+-....
T Consensus 237 ~~--------------~~~~~s----~~~v~gvlvQYP~t-~G~i~d~~el~~~a~~~~s-~vv~atDLLaL-tiLrpPg 295 (1001)
T KOG2040|consen 237 DI--------------KEADYS----SKDVSGVLVQYPDT-EGSVLDFDELVELAHANGS-LVVMATDLLAL-TILRPPG 295 (1001)
T ss_pred CH--------------HHhhcc----ccceeEEEEEcCCC-CCcccCHHHHHHHhhccCc-eEEEeehhhHH-HccCChh
Confidence 11 111111 45678899998876 6999999999999999988 5554211 111 1112344
Q ss_pred ccCccEEEEcCcccCcCCCC-----cEEEEEecCccccCCCCCce---eccC-CCCc-------ccc--cccccccCccc
Q 012991 241 EIGADFYVSNLHKWFFCPPS-----VAFLYCRKSILSSDMHHPVV---SHEF-GNGL-------PIE--SAWIGTRDYSA 302 (452)
Q Consensus 241 ~~~~d~~~~s~~K~l~g~~G-----~G~l~~~~~~~~~~l~~~~~---~~~~-~~~~-------~~~--~~~~~~~~~~~ 302 (452)
.+|+|++++|.+. ++-|-| .||+.++.++.+. ++... ..+. |... ..+ +..-.|.++..
T Consensus 296 efGaDIavGSsQR-FGVPlGYGGPHAaFfAv~~~l~R~--mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICT 372 (1001)
T KOG2040|consen 296 EFGADIAVGSSQR-FGVPLGYGGPHAAFFAVSESLVRM--MPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICT 372 (1001)
T ss_pred hcCceeeeccccc-cCccccCCCchHHHHHHHHHHHhh--CCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhH
Confidence 5689999999998 565544 4566666666554 33322 1111 1100 000 01124555555
Q ss_pred cccHHHHHHHHHHh---hcCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHH
Q 012991 303 QLVIPSAVTFVSRF---EGGIDGIMQRNHEQALKMARMLANAWGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGH 379 (452)
Q Consensus 303 ~~~~~~al~~~~~~---~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 379 (452)
..++.+-+..+-.+ ..|++.+.+++...+..|..+|... |-++... .+|=.+++. -+.+.+++.+.
T Consensus 373 AQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~a-ghel~~k----~fFDTLkI~------~~~s~~~~l~r 441 (1001)
T KOG2040|consen 373 AQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNA-GHELQHK----PFFDTLKIR------CGCSAEEVLDR 441 (1001)
T ss_pred HHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhc-chhhccc----cccceEEEE------ecCcHHHHHHH
Confidence 44444444333221 2489999999999999999999876 5555443 223222221 13367778777
Q ss_pred HhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHH
Q 012991 380 LRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVI 437 (452)
Q Consensus 380 L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~ 437 (452)
..++ +|-.+. ...+.+-+++--.++.+||+.++.++.
T Consensus 442 A~~~-~iNlr~--------------------~ed~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 442 AAKR-QINLRL--------------------VEDGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred HHhh-cCceEE--------------------eecCceEEeecccccHHHHHHHHHHHc
Confidence 6564 776652 334688899988889999999998865
No 391
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.75 E-value=1.7e-06 Score=79.88 Aligned_cols=307 Identities=14% Similarity=0.127 Sum_probs=179.7
Q ss_pred hHHHHHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHh-hccccc----------------CCCCCCC---EEEEeCC
Q 012991 79 RKGILESRAAVKDLINADDVGEISLVDNATTAAAIVLQQI-GRGFTE----------------GRFHRND---TVLMLHC 138 (452)
Q Consensus 79 ~~~~~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l-~~~~~~----------------~~~~~g~---~Vl~~~~ 138 (452)
.+..+.+++.+...-.- ....|...-+|+-|++.++.+. .|...+ ....||. -|+....
T Consensus 122 kd~~~~l~~~ll~~APK-G~~~v~tm~cGs~aNEnA~K~afiwy~~k~rg~~~~s~~e~eScm~n~aPg~P~lsvlsF~g 200 (484)
T KOG1405|consen 122 KDFAEKLRQSLLSIAPK-GQKQVITMLCGSCANENAYKTAFIWYRAKERGQAGFSAEELESCMINQAPGAPDLSVLSFKG 200 (484)
T ss_pred hhHHHHHHHHHHhhCcc-hHHHHHHHhccccccHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCCCCceeeeeecc
Confidence 44556666666665433 2356666667777888877755 222110 0123332 4666677
Q ss_pred cchhHHHHHHHHHHhcCcEEEEEeC---CCCCCCh-----------------HH-HHHHHHHHHhccccCCCceEEEEEe
Q 012991 139 AFQAVKKSIQAYVTRAGGSVVEVQL---PFPLASE-----------------EE-IINEFKKGIEKGKKDGKMIRLAIID 197 (452)
Q Consensus 139 ~~~s~~~~~~~~a~~~g~~v~~~~~---~~~~~~~-----------------~~-~~~~l~~~i~~~~~~~~~~~lv~~~ 197 (452)
+|++- .+..++......+..+++ +||..+. +. .++++|+.|.+.........+++++
T Consensus 201 aFHGR--~~g~lstT~SKpIHKldiPaFdWPiA~fP~ykYPLdenv~~N~ked~~Cl~~Ve~li~~~~~k~~pVaaiIvE 278 (484)
T KOG1405|consen 201 AFHGR--TFGSLSTTHSKPIHKLDIPAFDWPIAPFPRYKYPLDENVAENKKEDQGCLAEVEDLIVKYRKKKKPVAAIIVE 278 (484)
T ss_pred ccccc--cccccccccCccccccCCCCCCCCCCCCccccCChhhhhhhhhhhhhhHHHHHHHHHHHHhhcCCCeEEEEee
Confidence 77653 333333333334444443 2332211 12 2677777777654333456889999
Q ss_pred ccCCCCcccc----cHHHHHHHHHHcCCCEEEEecccccCC-c-------cccccccCccEEEEcCcccCcCCCCcEEEE
Q 012991 198 HITSMPCVVI----PVRKLVKICRDEGVDQVFVDAAHAMGS-I-------KIDVKEIGADFYVSNLHKWFFCPPSVAFLY 265 (452)
Q Consensus 198 ~~~n~tG~~~----~l~~i~~l~~~~~~~~~ivD~a~~~g~-~-------~~~~~~~~~d~~~~s~~K~l~g~~G~G~l~ 265 (452)
-+++.-|.-. =+..+.++|++|++ .+|||++|..|. . ..++.. .+|++++| |-+ ..| | .+
T Consensus 279 PIQsEGGDnhaSp~Ff~kLrdi~~Kh~v-~fivDEVQTGgGaTGk~WaHehw~l~~-PpD~vTFS--KK~--q~g-G-ff 350 (484)
T KOG1405|consen 279 PIQSEGGDNHASPDFFRKLRDITKKHGV-AFIVDEVQTGGGATGKFWAHEHWNLDS-PPDVVTFS--KKF--QTG-G-FF 350 (484)
T ss_pred chhccCCCccCCHHHHHHHHHHHHhcCe-EEEeeeeecCCCccCceeeehhcCCCC-Cccceehh--hhh--hcC-c-cc
Confidence 8888777754 26789999999999 899999986542 2 122222 57999887 543 232 4 34
Q ss_pred EecCccccCCCCCceeccCCCCcccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcC-C
Q 012991 266 CRKSILSSDMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALKMARMLANAWG-T 344 (452)
Q Consensus 266 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~-~ 344 (452)
.+.+++-. .||. .-.+|+|-|.-.. -+..+++.+. .+.+.+.+....++|.+.|.++.. .
T Consensus 351 h~~~frpn---~pYr---------ifNTWmGdP~k~l--ll~~vv~~I~-----~~~Ll~n~~~vG~~l~~gL~~Lq~~~ 411 (484)
T KOG1405|consen 351 HDEEFRPN---EPYR---------IFNTWMGDPSKNL--LLEEVVQEIK-----REDLLNNVAHVGKALLKGLLELQAKY 411 (484)
T ss_pred cCcccCCC---chHH---------HhhhhcCChHHHH--HHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 55555543 4442 1223455444322 2233344333 466777788888888888876521 0
Q ss_pred -CcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEeccccc
Q 012991 345 -SLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVY 423 (452)
Q Consensus 345 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~ 423 (452)
.....-..++.|+.+..| ++.-.+.+...++- .|+.+. + =+...||+-++..
T Consensus 412 p~~~~~~RGrGTF~a~d~p------s~~~Rdk~i~~~~~-nGv~~G-G-------------------Cg~~siRfRPsLv 464 (484)
T KOG1405|consen 412 PGKINNLRGRGTFIAWDCP------SGSIRDKLILIARL-NGVNLG-G-------------------CGDKSIRFRPSLV 464 (484)
T ss_pred chhhhcccccceEEEEeCC------ChHHHHHHHHHHHH-cCceec-c-------------------cccceeeecccee
Confidence 111122235888888887 34444567777755 488873 1 1235688887766
Q ss_pred CCHHHHHHHHHHHHHHHhc
Q 012991 424 NTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 424 ~t~~di~~l~~~l~~~~~~ 442 (452)
-++.+.+.+++.+.+++..
T Consensus 465 f~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 465 FRKHHADIFLDIFDKILAG 483 (484)
T ss_pred ehhhhHHHHHHHHHHHhcc
Confidence 6888899999999998753
No 392
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=98.71 E-value=2.3e-07 Score=85.17 Aligned_cols=332 Identities=13% Similarity=0.114 Sum_probs=188.5
Q ss_pred CCeEEeccCCC------CCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhH-hCCCC----CCcEE--Ee
Q 012991 38 HGVARINNGSF------GSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDL-INADD----VGEIS--LV 104 (452)
Q Consensus 38 ~~~~~l~~~~~------~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~-~~~~~----~~~i~--~t 104 (452)
..-++|..|.+ ....++|+++-++.... ..+. .|-+-.+..+..+..+++ +|... ...++ .+
T Consensus 52 ~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~-~ldK----EYlpI~Gl~eF~k~sakLa~G~~s~~ik~~Ri~tvQ~ 126 (427)
T KOG1411|consen 52 PKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASL-SLDK----EYLPITGLAEFNKLSAKLALGDNSPVIKEKRIVTVQT 126 (427)
T ss_pred cceeeecccceecCCCCeeeeHHHHHHHHHHhhh-cccc----hhccccchHHHHHHHHHHhhcCCchhhhccceeEEEe
Confidence 34556655543 24455688877766542 1111 233344566666666665 34321 23444 35
Q ss_pred cChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhcc
Q 012991 105 DNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKG 184 (452)
Q Consensus 105 ~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~ 184 (452)
-|||.|+...+.-+.+ +-++..|.+++|+|..+...+.. .|..+..+...++.. .+...+.+.+.+.+.
T Consensus 127 lSGTGaLriga~Fl~~------f~~~~~I~ip~PTWgNh~~if~~----ag~~~~~yrYyd~~t-~gld~~g~ledl~~~ 195 (427)
T KOG1411|consen 127 LSGTGALRVGAEFLAR------FYPSRDIYIPDPTWGNHKNIFKD----AGLPVKFYRYYDPKT-RGLDFKGMLEDLGEA 195 (427)
T ss_pred ccCcchhhHHHHHHHh------hccccceeecCCcccccCccccc----cCcceeeeeeccccc-cccchHHHHHHHhcC
Confidence 5899998888876653 45688999999999887777744 588887776543322 222244444444322
Q ss_pred ccCCCceEEEEEeccCCCCcccc---cHHHHHHHHHHcCCCEEEEecccc---cCCccccccc------cCcc-EEEEcC
Q 012991 185 KKDGKMIRLAIIDHITSMPCVVI---PVRKLVKICRDEGVDQVFVDAAHA---MGSIKIDVKE------IGAD-FYVSNL 251 (452)
Q Consensus 185 ~~~~~~~~lv~~~~~~n~tG~~~---~l~~i~~l~~~~~~~~~ivD~a~~---~g~~~~~~~~------~~~d-~~~~s~ 251 (452)
.+.--+++-...+||||+=. ..++|.++.++.+. +-+.|.|+. .|....|... .+-+ +++-|+
T Consensus 196 ---p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~-~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSy 271 (427)
T KOG1411|consen 196 ---PEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNL-LPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSY 271 (427)
T ss_pred ---CCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccc-cchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhh
Confidence 23334556666799999753 36688999999998 789998752 2333333221 1334 455599
Q ss_pred cccCcCCCC--cEEEE--Eec-Ccccc------CCCCCceeccCCCCcccccccccccCccccccHHHHH---HHHHHhh
Q 012991 252 HKWFFCPPS--VAFLY--CRK-SILSS------DMHHPVVSHEFGNGLPIESAWIGTRDYSAQLVIPSAV---TFVSRFE 317 (452)
Q Consensus 252 ~K~l~g~~G--~G~l~--~~~-~~~~~------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al---~~~~~~~ 317 (452)
.|- .|.+| +|.+- +++ +...+ -+..|.. ++|+..........+ +....+.
T Consensus 272 AKN-MGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmY---------------SnPP~hGArIv~~Il~d~~l~~~W~ 335 (427)
T KOG1411|consen 272 AKN-MGLYGERVGALSVVCKDADEAKRVESQLKILIRPMY---------------SNPPLHGARIVATILSDPDLKNQWL 335 (427)
T ss_pred hhh-cchhhhccceeEEEecCHHHHHHHHHHHHHHhcccc---------------cCCCccchhhhhhccCChHHHHHHH
Confidence 996 78877 55442 222 22221 1122221 222222211111111 1111122
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCc-ccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCC
Q 012991 318 GGIDGIMQRNHEQALKMARMLANAWGTSLGSPP-EICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPK 396 (452)
Q Consensus 318 ~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~ 396 (452)
+..+.+.+|+...++.|.+.|... +......- ...-++++| ++.+++++ +.|.+++.|++.
T Consensus 336 ~evk~MadRi~~mR~~L~d~L~~~-gs~~~W~hI~~QIGMF~f---------Tgl~peQv-~~l~ke~~iYmT------- 397 (427)
T KOG1411|consen 336 GEVKGMADRIISMRQQLFDALEKE-GSPGNWSHITKQIGMFCF---------TGLNPEQV-DWLTKEYHIYLT------- 397 (427)
T ss_pred HHHHHHHHhhhhhHHHHhHHhhcC-CCCccHHHHHHhhheeee---------cCCCHHHH-HHHHhhheeeec-------
Confidence 246888899999999999998764 32211100 012456666 46677655 666677888873
Q ss_pred CCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHh
Q 012991 397 DDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVE 441 (452)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~ 441 (452)
+--|||+... +...+..+.++|..+.+
T Consensus 398 -----------------~dGRiS~aG~-ss~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 398 -----------------KDGRISMAGL-SSSNVPYLADAIHAVTK 424 (427)
T ss_pred -----------------cCceEeeccc-cccCCcccchhhHhHhc
Confidence 1238888765 45568888888877654
No 393
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.64 E-value=3.8e-06 Score=75.92 Aligned_cols=173 Identities=17% Similarity=0.218 Sum_probs=120.1
Q ss_pred HHHHHHHHHHHhHhCCCCCCcEE--EecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCC-cchhHHHHHHHH------
Q 012991 80 KGILESRAAVKDLINADDVGEIS--LVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHC-AFQAVKKSIQAY------ 150 (452)
Q Consensus 80 ~~~~~~~~~la~~~~~~~~~~i~--~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~-~~~s~~~~~~~~------ 150 (452)
.+.+.+.+-.|+.||++ +.++ ---|||.|+..++.++ ++|||+.+.... .|......+..-
T Consensus 65 ~GRdtLe~vyA~vf~aE--~a~VRpq~isGTHAI~~aLfg~--------LRpgDell~i~G~PYDTLeevIG~rg~~~gS 134 (416)
T COG4100 65 LGRDTLERVYAQVFGAE--AALVRPQIISGTHAIACALFGI--------LRPGDELLYITGSPYDTLEEVIGLRGEGQGS 134 (416)
T ss_pred cchhHHHHHHHHHhccc--cceeeeeeecchhHHHHHHHhc--------cCCCCeEEEecCCcchhHHHHhccCCCCccc
Confidence 34566778899999996 4333 2357889999999876 799999887533 333332222110
Q ss_pred HHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccC----CCCcccccHHHHHHHHHHc--CCCE
Q 012991 151 VTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHIT----SMPCVVIPVRKLVKICRDE--GVDQ 223 (452)
Q Consensus 151 a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~----n~tG~~~~l~~i~~l~~~~--~~~~ 223 (452)
-...|++.+.+ +...++.+ .+.+.+.+ +++|++|.+.-.. -|+=.+.++++|+++.|+. ++ +
T Consensus 135 L~dfgi~Y~~v----~Lt~~gkiD~~~v~~~i------~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~-i 203 (416)
T COG4100 135 LKDFGIKYKAV----PLTADGKIDIQAVKTAI------SDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNV-I 203 (416)
T ss_pred HHHhCcceeec----ccccCCcccHHHHHHhc------CccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCE-E
Confidence 02236788888 44456666 89999999 7899999886432 1222234567777788876 68 8
Q ss_pred EEEecccccCCccccccccCccEEEEcCcccCcCCCC--cEEEEEecCcccc
Q 012991 224 VFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPS--VAFLYCRKSILSS 273 (452)
Q Consensus 224 ~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G--~G~l~~~~~~~~~ 273 (452)
++||.+++-..........++|++..|+-|.-+|..- .|++..+.++++.
T Consensus 204 vFVDNCYGEFvE~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~ 255 (416)
T COG4100 204 VFVDNCYGEFVEEKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEA 255 (416)
T ss_pred EEEeccchhhhhccCccccchhhhccceeeCCCCceeeccceeechHHHHHh
Confidence 9999999887777777778999999999997444211 3788888888875
No 394
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.86 E-value=0.00051 Score=61.35 Aligned_cols=173 Identities=17% Similarity=0.177 Sum_probs=99.0
Q ss_pred HHHHHHhHhCCCCCCcEEEec-ChhHHHHHHHHHhhcccccCCCCCC-CEEEEeCCcchhHHHHHHHHHHhcCcEEEEEe
Q 012991 85 SRAAVKDLINADDVGEISLVD-NATTAAAIVLQQIGRGFTEGRFHRN-DTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQ 162 (452)
Q Consensus 85 ~~~~la~~~~~~~~~~i~~t~-g~t~a~~~~~~~l~~~~~~~~~~~g-~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~ 162 (452)
+..-+-++.|+....+.++++ -....+.+++..+.+ -+|. .-|+..+.+-.|..+.+-. .|+++..++
T Consensus 62 ~a~~~i~l~glhav~nc~vvpl~tgmslslc~~s~r~------krpkakyiiw~ridqks~~ksi~~----agfepiiie 131 (432)
T KOG3843|consen 62 FAKDAIHLAGLHAVANCFVVPLATGMSLSLCFLSLRH------KRPKAKYIIWLRIDQKSCFKSIIH----AGFEPIIIE 131 (432)
T ss_pred HHHHHHHHhhhhhhhceeEEeccccccHHHHHHHHhh------cCCcccEEEEEecchHHHHHHHHh----cCCCceeee
Confidence 334444555654233334333 333566677766643 2343 4677777776665555533 488888775
Q ss_pred CCCCCCChHHH--HHHHHHHHhccccCCCceEEEEEeccCCCCcc-cccHHHHHHHHHHcCCCEEEEecccccCCc---c
Q 012991 163 LPFPLASEEEI--INEFKKGIEKGKKDGKMIRLAIIDHITSMPCV-VIPVRKLVKICRDEGVDQVFVDAAHAMGSI---K 236 (452)
Q Consensus 163 ~~~~~~~~~~~--~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~-~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~---~ 236 (452)
.- .+.+..+ ++.+++.+++. ++..-+.+.+..+-..-. ...+++|+.+|..|++ +-+|..+++.-.. .
T Consensus 132 ~i--~d~d~l~tdleav~~~iee~---g~dcilci~sttscfapr~pd~leaiaaica~~di-phivnnayglqsee~i~ 205 (432)
T KOG3843|consen 132 NI--LDGDELITDLEAVEAIIEEL---GEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDI-PHIVNNAYGLQSEECIH 205 (432)
T ss_pred cc--ccchHHHHhHHHHHHHHHHh---CCceEEEEeecccccCCCCCchHHHHHHHHHccCc-hhhhccccccchHHHHH
Confidence 31 1222222 77777777654 444434333322211111 2348999999999999 6999988776432 1
Q ss_pred ---ccccccCccEEEEcCcccCcCCCCcEEEE-EecCcccc
Q 012991 237 ---IDVKEIGADFYVSNLHKWFFCPPSVAFLY-CRKSILSS 273 (452)
Q Consensus 237 ---~~~~~~~~d~~~~s~~K~l~g~~G~G~l~-~~~~~~~~ 273 (452)
-...--.+|.++-|..|.+..|.|.+++. +++..++.
T Consensus 206 ~iaa~~~~grida~vqsldknf~vpvggaiia~fk~n~iq~ 246 (432)
T KOG3843|consen 206 KIAAAAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQE 246 (432)
T ss_pred HHHHHhhhccHHHHHHHhhhcceeecchhHhhHhHHHHHHH
Confidence 11111247889999999988888733332 35555554
No 395
>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]
Probab=97.12 E-value=0.00064 Score=68.02 Aligned_cols=380 Identities=15% Similarity=0.066 Sum_probs=202.2
Q ss_pred HHhhhccCCCCeEEeccCCCCCCcHHHHHHHHHHH-HHHhcCCchh--hhhhhhHHHHHHHHHHHhHhCCC-CCCcEEEe
Q 012991 29 IRDEFSHHQHGVARINNGSFGSCPKSVLADQQKWQ-LKFLQQPDDF--YFNSLRKGILESRAAVKDLINAD-DVGEISLV 104 (452)
Q Consensus 29 ir~~~~~~~~~~~~l~~~~~~~~p~~v~e~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~la~~~~~~-~~~~i~~t 104 (452)
++++|..+ .|++........++..+....-. .....+|+.. .+........+.|-++..+++-. ....+.||
T Consensus 14 r~~e~s~~----~yldhag~tl~sesq~~g~~~~sq~~e~~nphs~~~ts~~l~~~v~Q~r~ril~~f~tta~dy~v~lp 89 (728)
T KOG2142|consen 14 RDREFSRL----AYLDHAGRTLFSESQLEGVAFQSQSSENANPHSHLGTSRSLARLVAQVRLRILALFNTTAFDYEVSLP 89 (728)
T ss_pred hhHHHHHH----HHHHhhhhhhhhhcccchhhhhhhccccCCCcccccchHHHHHHHHHHHHHHHHHhccccccccchhH
Confidence 67777643 28888877766655555532222 2223455554 23445567777888888898854 23577888
Q ss_pred cChhHHHHHHHHHhhcccccCCCCCCCEEEEeCC---cchhHHHHHHHHHHhcCcEEEEE-eCCCCCCChHHHHHHHHHH
Q 012991 105 DNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHC---AFQAVKKSIQAYVTRAGGSVVEV-QLPFPLASEEEIINEFKKG 180 (452)
Q Consensus 105 ~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~---~~~s~~~~~~~~a~~~g~~v~~~-~~~~~~~~~~~~~~~l~~~ 180 (452)
. .|+|+..++.++.+ ...+.+|--.+. .|-+....... -...|+.+..+ .+. ..++.... ...+..
T Consensus 90 ~-~t~al~~vae~fp~------~s~tekid~lrs~~y~hls~s~~~~~-~~~~~~gl~sy~q~~-~i~~~~~~-sls~~~ 159 (728)
T KOG2142|consen 90 A-LTEALKLVAEAFPF------YSQTEKIDNLRSDEYGHLSSSGHLMR-LDYSGIGLFSYSQTN-EISDSEEF-SLSESE 159 (728)
T ss_pred H-HHHHHHHHHHhCcc------ccccccccchhhhhhcccccccceee-eeeeccceEEeeeee-eccccccc-cccccc
Confidence 8 99999999999853 344444443333 23222100000 01123333333 110 01110000 001111
Q ss_pred HhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCC
Q 012991 181 IEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPS 260 (452)
Q Consensus 181 i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G 260 (452)
.. -....+.......|..|..+....+..+.-..+- ++++|.+.-....+++.....+|++.. +.| ++|.+.
T Consensus 160 ~~-----ls~~~L~~g~a~~nfeg~kik~ri~d~L~ipe~~-y~lldtaSrvSaf~Ldaesy~f~~~~~-llt-iFgyet 231 (728)
T KOG2142|consen 160 AN-----LSEHSLFGGAAQSNFEGDKIKLRIMDRLNIPESE-YVLLDTASRVSAFPLDAESYPFDFNPK-LLT-IFGYET 231 (728)
T ss_pred cC-----cccchhcccchhcccccceeeeeeecccccCCce-EEEEEeecccccccchHhhCCCcccch-hee-ecCCCc
Confidence 10 1234456666666777765444444333333355 899999888888899999999999999 999 466553
Q ss_pred cEEEEEecCccccCCCCCceeccCCCCc-------ccccccccccCccccccHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Q 012991 261 VAFLYCRKSILSSDMHHPVVSHEFGNGL-------PIESAWIGTRDYSAQLVIPSAVTFVSRFEGGIDGIMQRNHEQALK 333 (452)
Q Consensus 261 ~G~l~~~~~~~~~~l~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~al~~~~~~~~g~~~~~~~~~~~~~~ 333 (452)
|.+......... +-....+.++.+.. -.+++..|+..+-.+++.........+..++...+......+.++
T Consensus 232 -gAvlv~~r~A~~-~Ggkt~sa~f~wp~~~l~s~~lkkr~e~gk~~~kd~a~gl~vFp~~sRvtG~~ysy~wmt~al~~~ 309 (728)
T KOG2142|consen 232 -GAVLVMNRSAEL-KGGKTASAEFSWPMLYLLSEKLKKRFEDGKLRFKDIAQGLFVFPTQSRVTGGMYSYSWMTLALANN 309 (728)
T ss_pred -hhhHHHhhhhHh-hcCccceeecccchHHHHHHHHHHHHhhccccccchhhheeccchHhhhcccchhHHHHHHHHhhh
Confidence 444433222221 00000111222211 123456678888777777777777777667888888888888888
Q ss_pred HHHHHHHH---------cCCCcCCCcccccceEEEEcCCccccCChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCC
Q 012991 334 MARMLANA---------WGTSLGSPPEICAAMVMVGLPSRLRVMGEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAG 404 (452)
Q Consensus 334 l~~~L~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~ 404 (452)
....|.+. .+...+.| +..+.++.|.+.... +.++.--.+.... -++|..++++.+.. ++|...
T Consensus 310 whvlLda~~lG~kdmd~yglS~f~P-dfqg~sf~fv~g~d~--psgfGcl~VkKs~--i~~l~lrtGcfcn~--Gack~~ 382 (728)
T KOG2142|consen 310 WHVLLDALALGPKDMDSYGLSLFQP-DFQGPSFYFVFGRDD--PSGFGCLEVKKSA--ISGLELRTGCFCNI--GACKIY 382 (728)
T ss_pred HHHHHhhhccCcchHhhhhhhccCc-cceeeeEEEEeccCC--CCceeeeeeehhh--hhceeccCCCCCCC--cceeec
Confidence 88888763 22333443 334666666653210 0111111222222 35888887777532 234433
Q ss_pred C-------CC---C--CCCccceEEecccccCCHHHHHHHHHHHHHHH
Q 012991 405 A-------RD---K--DGIITGYARISHQVYNTLEDYEKFRDAVILLV 440 (452)
Q Consensus 405 ~-------~~---~--~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~ 440 (452)
+ ++ + ...+.+.=-++ ++..|.+|+..++.++..-.
T Consensus 383 pgl~~~~~~~~~~~g~~cgD~dg~~~s-~~~~~~~~~~a~~~~~v~~~ 429 (728)
T KOG2142|consen 383 PGLYLEMSQKGLSAGKGCGDNDGQPVS-GYMQTPADVGAYLSAQVSDV 429 (728)
T ss_pred ccccHHHHHHHhhhccccccCCCCccc-ccccchhhhhHHHHHhhhhh
Confidence 2 00 0 00000000155 55568888888888765544
No 396
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=97.11 E-value=0.0014 Score=55.26 Aligned_cols=53 Identities=25% Similarity=0.318 Sum_probs=41.2
Q ss_pred HHHHHHHHHhHh----C--CC-CCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchh
Q 012991 82 ILESRAAVKDLI----N--AD-DVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQA 142 (452)
Q Consensus 82 ~~~~~~~la~~~----~--~~-~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s 142 (452)
..++|+++++++ | ++ ++++|++|+|+++|+.+++.++ +++||.|++++|.|++
T Consensus 94 ~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l--------~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 94 LANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCI--------ADPGDAFLVPTPYYAA 153 (153)
T ss_pred cHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHH--------cCCCCEEEEeCCCCCC
Confidence 444555555544 5 22 4789999999999999999987 5899999999999863
No 397
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=93.06 E-value=1.7 Score=42.93 Aligned_cols=131 Identities=18% Similarity=0.193 Sum_probs=80.6
Q ss_pred EEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCC---hHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccc
Q 012991 132 TVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLAS---EEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVI 207 (452)
Q Consensus 132 ~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~---~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~ 207 (452)
.+.++...|. ....++|+..|+.-..+.+....+. ++.+ ...+++.|+++-..+++|-+++..-..+..|...
T Consensus 233 t~YiS~alh~---~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnD 309 (838)
T KOG0630|consen 233 TFYISEALHM---DLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQND 309 (838)
T ss_pred eEEEcccccH---HHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchH
Confidence 3444444443 2344446777876665543212222 3466 7888888887666577787777777778889998
Q ss_pred cHHHHHHHHHHcC-CCEEEEecccccCCccc-ccc------ccCccEEEEcCcccCcCCCCcEEEEEec
Q 012991 208 PVRKLVKICRDEG-VDQVFVDAAHAMGSIKI-DVK------EIGADFYVSNLHKWFFCPPSVAFLYCRK 268 (452)
Q Consensus 208 ~l~~i~~l~~~~~-~~~~ivD~a~~~g~~~~-~~~------~~~~d~~~~s~~K~l~g~~G~G~l~~~~ 268 (452)
-+-+|.++|++++ .| +++-| |++..+.. ... .-..|.++....-|+ |.+..-++...+
T Consensus 310 mi~kildi~eahakfW-LHasG-haiAALt~aepnnil~HV~eqldSMal~ialWL-GiPSaPiV~LHR 375 (838)
T KOG0630|consen 310 MILKILDICEAHAKFW-LHASG-HAIAALTCAEPNNILGHVEEQLDSMALNIALWL-GIPSAPIVLLHR 375 (838)
T ss_pred HHHHHHHHHHHhhhee-Eeecc-chhhheeecCcccchhHHHHHHhhccchhHHHh-CCCCCceEEeec
Confidence 9999999999997 84 88775 33322211 111 113577777778885 444344544433
No 398
>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]
Probab=83.40 E-value=1.2 Score=45.43 Aligned_cols=175 Identities=17% Similarity=0.182 Sum_probs=111.1
Q ss_pred HHHHHHhHhCCCCCC-cEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHH-HHHHHhcCcEEEEEe
Q 012991 85 SRAAVKDLINADDVG-EISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSI-QAYVTRAGGSVVEVQ 162 (452)
Q Consensus 85 ~~~~la~~~~~~~~~-~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~-~~~a~~~g~~v~~~~ 162 (452)
+++.+-++++.++.+ .+++|.+-.+|..+.+.... ++-... +..=..|++-...| ...|+..|+++....
T Consensus 181 ik~ri~d~L~ipe~~y~lldtaSrvSaf~Ldaesy~-------f~~~~~-lltiFgyetgAvlv~~r~A~~~Ggkt~sa~ 252 (728)
T KOG2142|consen 181 IKLRIMDRLNIPESEYVLLDTASRVSAFPLDAESYP-------FDFNPK-LLTIFGYETGAVLVMNRSAELKGGKTASAE 252 (728)
T ss_pred eeeeeecccccCCceEEEEEeecccccccchHhhCC-------Ccccch-heeecCCCchhhHHHhhhhHhhcCccceee
Confidence 777888888887444 44678888888888887652 222223 55545555522222 222566677777665
Q ss_pred CCCCCCChHHHHHHHHHHHhccccCCCc--eEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccccCCcccc--
Q 012991 163 LPFPLASEEEIINEFKKGIEKGKKDGKM--IRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAMGSIKID-- 238 (452)
Q Consensus 163 ~~~~~~~~~~~~~~l~~~i~~~~~~~~~--~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~~~~-- 238 (452)
.+|| .....-++|++.++..+..... .-+.+|+..+-.||..+++.++ .++.+.++ .+..|.-+- |...++
T Consensus 253 f~wp--~~~l~s~~lkkr~e~gk~~~kd~a~gl~vFp~~sRvtG~~ysy~wm-t~al~~~w-hvlLda~~l-G~kdmd~y 327 (728)
T KOG2142|consen 253 FSWP--MLYLLSEKLKKRFEDGKLRFKDIAQGLFVFPTQSRVTGGMYSYSWM-TLALANNW-HVLLDALAL-GPKDMDSY 327 (728)
T ss_pred cccc--hHHHHHHHHHHHHhhccccccchhhheeccchHhhhcccchhHHHH-HHHHhhhH-HHHHhhhcc-CcchHhhh
Confidence 5443 2233367899998753321111 2357888888899999999998 56666677 688885433 543332
Q ss_pred -ccccCccEEEEcCcccCcC--CCCcEEEEEecCccc
Q 012991 239 -VKEIGADFYVSNLHKWFFC--PPSVAFLYCRKSILS 272 (452)
Q Consensus 239 -~~~~~~d~~~~s~~K~l~g--~~G~G~l~~~~~~~~ 272 (452)
.....+|+...++++.++- |.|.|++.+++-.+.
T Consensus 328 glS~f~Pdfqg~sf~fv~g~d~psgfGcl~VkKs~i~ 364 (728)
T KOG2142|consen 328 GLSLFQPDFQGPSFYFVFGRDDPSGFGCLEVKKSAIS 364 (728)
T ss_pred hhhccCccceeeeEEEEeccCCCCceeeeeeehhhhh
Confidence 3334589999999996543 566888888775543
No 399
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=79.08 E-value=41 Score=30.09 Aligned_cols=101 Identities=12% Similarity=0.193 Sum_probs=65.8
Q ss_pred cEEEecChhHHHHHHHHHhhcccccCCCCCCCEEE---E--eCC-----cchhHHHHHHHHHHhcCcEEEEEeCCCCCCC
Q 012991 100 EISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVL---M--LHC-----AFQAVKKSIQAYVTRAGGSVVEVQLPFPLAS 169 (452)
Q Consensus 100 ~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl---~--~~~-----~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~ 169 (452)
.+++-|||.-++.++..++ +.|.+|. + +.. -|.-+......+|+..|+.+....+.. .
T Consensus 3 ~~aL~SGGKDS~~Al~~a~---------~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g---~ 70 (223)
T COG2102 3 VIALYSGGKDSFYALYLAL---------EEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSG---E 70 (223)
T ss_pred EEEEEecCcHHHHHHHHHH---------HcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCc---c
Confidence 4678899988888887766 5555433 1 211 244466777777899999999885421 1
Q ss_pred hHHHHHHHHHHHhccccCCCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEE
Q 012991 170 EEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVF 225 (452)
Q Consensus 170 ~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~i 225 (452)
.+.-.++|.+++++. +...|+. |.+.+ .+++-.+|++.|+ ..+
T Consensus 71 ~e~eve~L~~~l~~l-----~~d~iv~-------GaI~s~yqk~rve~lc~~lGl-~~~ 116 (223)
T COG2102 71 EEREVEELKEALRRL-----KVDGIVA-------GAIASEYQKERVERLCEELGL-KVY 116 (223)
T ss_pred chhhHHHHHHHHHhC-----cccEEEE-------chhhhHHHHHHHHHHHHHhCC-EEe
Confidence 222278888888642 3334433 66654 6688999999998 443
No 400
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=74.33 E-value=30 Score=33.00 Aligned_cols=96 Identities=15% Similarity=0.283 Sum_probs=61.5
Q ss_pred CCCCCEEEEeCC-cchh-HHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEecc---CC
Q 012991 127 FHRNDTVLMLHC-AFQA-VKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHI---TS 201 (452)
Q Consensus 127 ~~~g~~Vl~~~~-~~~s-~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~---~n 201 (452)
.+.|..|++... .|.+ ....+...+++.|+.+..-+. ..|.....++.++.+. ..+..+|++... +|
T Consensus 164 ~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~~--G~DpAaVafDAi~~Ak------ar~~DvvliDTAGRLhn 235 (340)
T COG0552 164 KQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGKE--GADPAAVAFDAIQAAK------ARGIDVVLIDTAGRLHN 235 (340)
T ss_pred HHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccCC--CCCcHHHHHHHHHHHH------HcCCCEEEEeCcccccC
Confidence 467778877644 4433 123333447888998887531 2232233389999988 567888888764 34
Q ss_pred CCcccccHHHHHHHHHHcC------CCEEEEecccc
Q 012991 202 MPCVVIPVRKLVKICRDEG------VDQVFVDAAHA 231 (452)
Q Consensus 202 ~tG~~~~l~~i~~l~~~~~------~~~~ivD~a~~ 231 (452)
-...+.+++.|.+++++.. + ++++|+..+
T Consensus 236 k~nLM~EL~KI~rV~~k~~~~ap~e~-llvlDAttG 270 (340)
T COG0552 236 KKNLMDELKKIVRVIKKDDPDAPHEI-LLVLDATTG 270 (340)
T ss_pred chhHHHHHHHHHHHhccccCCCCceE-EEEEEcccC
Confidence 4444556888888887753 7 788898643
No 401
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=71.55 E-value=15 Score=35.89 Aligned_cols=63 Identities=17% Similarity=0.436 Sum_probs=44.1
Q ss_pred CcEEEEEeCCCCC--CChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEe
Q 012991 155 GGSVVEVQLPFPL--ASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVD 227 (452)
Q Consensus 155 g~~v~~~~~~~~~--~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD 227 (452)
+.++..++.+++. .....+.+.+++.+ ...++++++.- .-|.+.+.+.|.++|++.|+ ++++|
T Consensus 113 nQQllRvD~Ee~~~~~~~~~ll~~~~~~l-------~~~~~vVLSDY--~KG~L~~~q~~I~~ar~~~~-pVLvD 177 (467)
T COG2870 113 NQQLLRLDFEEKFPIEDENKLLEKIKNAL-------KSFDALVLSDY--AKGVLTNVQKMIDLAREAGI-PVLVD 177 (467)
T ss_pred cceEEEecccccCcchhHHHHHHHHHHHh-------hcCCEEEEecc--ccccchhHHHHHHHHHHcCC-cEEEC
Confidence 3456666543222 12223366677666 56778888753 46999999999999999999 79999
No 402
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=67.51 E-value=56 Score=32.25 Aligned_cols=128 Identities=16% Similarity=0.211 Sum_probs=68.5
Q ss_pred CCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCC----
Q 012991 128 HRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMP---- 203 (452)
Q Consensus 128 ~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~t---- 203 (452)
+.+ +|++...+=. ...+...|++.|+....+-+- +..+ .+++.+.++ ..+|+++++.++++..
T Consensus 119 ~~~-~vLYVsGEES--~~QiklRA~RL~~~~~~l~l~-aEt~----~e~I~~~l~-----~~~p~lvVIDSIQT~~s~~~ 185 (456)
T COG1066 119 KRG-KVLYVSGEES--LQQIKLRADRLGLPTNNLYLL-AETN----LEDIIAELE-----QEKPDLVVIDSIQTLYSEEI 185 (456)
T ss_pred hcC-cEEEEeCCcC--HHHHHHHHHHhCCCccceEEe-hhcC----HHHHHHHHH-----hcCCCEEEEeccceeecccc
Confidence 344 6666555432 244555578888533222110 1111 577777776 5789999999987753
Q ss_pred ----cccccH----HHHHHHHHHcCCCEEEE-----ecccccCCc---ccc----ccc-cCccEEEEcCcccCcCCCC-c
Q 012991 204 ----CVVIPV----RKLVKICRDEGVDQVFV-----DAAHAMGSI---KID----VKE-IGADFYVSNLHKWFFCPPS-V 261 (452)
Q Consensus 204 ----G~~~~l----~~i~~l~~~~~~~~~iv-----D~a~~~g~~---~~~----~~~-~~~d~~~~s~~K~l~g~~G-~ 261 (452)
|.+--+ .++.++||+.|++++++ ||+-+.+.. -+| +.. -+..+=+.-..|.=+|+.+ +
T Consensus 186 ~SapGsVsQVRe~t~~L~~~AK~~~i~~fiVGHVTKeG~IAGPrvLEHmVDtVlyFEGd~~~~~RiLR~vKNRFG~t~Ei 265 (456)
T COG1066 186 TSAPGSVSQVREVAAELMRLAKTKNIAIFIVGHVTKEGAIAGPRVLEHMVDTVLYFEGDRHSRYRILRSVKNRFGATNEL 265 (456)
T ss_pred cCCCCcHHHHHHHHHHHHHHHHHcCCeEEEEEEEcccccccCchheeeeeeEEEEEeccCCCceeeeehhcccCCcccce
Confidence 433333 36788999999954444 444333321 011 000 0122333334565577777 7
Q ss_pred EEEEEec
Q 012991 262 AFLYCRK 268 (452)
Q Consensus 262 G~l~~~~ 268 (452)
|++-+..
T Consensus 266 GvFeM~~ 272 (456)
T COG1066 266 GVFEMTE 272 (456)
T ss_pred eEEEEec
Confidence 7666654
No 403
>KOG1577 consensus Aldo/keto reductase family proteins [General function prediction only]
Probab=66.80 E-value=95 Score=29.31 Aligned_cols=151 Identities=17% Similarity=0.187 Sum_probs=72.9
Q ss_pred CCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHh---CCCCCCcEEEecC--hh--------HHHHHHHH
Q 012991 50 SCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLI---NADDVGEISLVDN--AT--------TAAAIVLQ 116 (452)
Q Consensus 50 ~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~---~~~~~~~i~~t~g--~t--------~a~~~~~~ 116 (452)
..+..+.+++..++..-..+-+....|+.+ +++-++|.+++ +++ .+++++|+= .+ .|+...+.
T Consensus 25 ~~~~~~~~aV~~Al~~GYRHIDtA~~Y~NE---~evG~aik~~i~~~~v~-RediFiTSKlw~~~~~~~~v~~al~~sLk 100 (300)
T KOG1577|consen 25 SPPGQVAEAVKAAIKAGYRHIDTAHVYGNE---KEVGEAIKELLAEGGVK-REDIFITSKLWPTDHAPELVEKALEKSLK 100 (300)
T ss_pred cChhhHHHHHHHHHHhCcceeechhhhCCh---HHHHHHHHHHhhhCCcc-hhhheeeeccCccccChhhHHHHHHHHHH
Confidence 556778888888776533333333334433 33444455544 665 577887752 22 24455555
Q ss_pred Hhhcccc-----c--CCC------CCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhc
Q 012991 117 QIGRGFT-----E--GRF------HRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEK 183 (452)
Q Consensus 117 ~l~~~~~-----~--~~~------~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~ 183 (452)
.+...|- | ..+ ...++++.....+.....+.+.+ -..| .++.+ .+.+.. ..+|++.+..
T Consensus 101 ~L~ldYvDLyLiH~P~~~k~~~~~~~~~~~~~~~~~~~~tW~amE~~-~~~G-l~rsI----GVSNF~--~~~le~ll~~ 172 (300)
T KOG1577|consen 101 KLQLDYVDLYLIHWPVAFKDSFPKDENGKVNYDDVDRIETWKAMEKL-VDEG-LVRSI----GVSNFN--IKQLEELLNL 172 (300)
T ss_pred HhChhhhheeeEecccccCCCCCcccccccccccchHHHHHHHHHHH-HHcC-CceEe----eeecCC--HHHHHHHHhc
Confidence 4422110 0 000 01124444444444444444432 3334 45555 333332 4556665542
Q ss_pred cccCCCceEEE-EEeccCCCCcccccHHHHHHHHHHcCC
Q 012991 184 GKKDGKMIRLA-IIDHITSMPCVVIPVRKLVKICRDEGV 221 (452)
Q Consensus 184 ~~~~~~~~~lv-~~~~~~n~tG~~~~l~~i~~l~~~~~~ 221 (452)
. ..+|.+- +=+|| .++-+++.++|+++|+
T Consensus 173 ~---ki~P~vnQvE~HP------~~~Q~~L~~fCk~~~I 202 (300)
T KOG1577|consen 173 A---KIKPAVNQVECHP------YLQQKKLVEFCKSKGI 202 (300)
T ss_pred C---CCCCccceeeccC------CcChHHHHHHHhhCCc
Confidence 1 1222221 22222 3567789999999998
No 404
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=66.29 E-value=36 Score=26.88 Aligned_cols=91 Identities=16% Similarity=0.235 Sum_probs=55.4
Q ss_pred HHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHc--CCC
Q 012991 145 KSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDE--GVD 222 (452)
Q Consensus 145 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~--~~~ 222 (452)
..+..+.+..|.++..++.. .. .+++.+.+.+ .++++|.++... +.......++++..|+. ++
T Consensus 18 ~~la~~l~~~G~~v~~~d~~----~~---~~~l~~~~~~-----~~pd~V~iS~~~--~~~~~~~~~l~~~~k~~~p~~- 82 (121)
T PF02310_consen 18 LYLAAYLRKAGHEVDILDAN----VP---PEELVEALRA-----ERPDVVGISVSM--TPNLPEAKRLARAIKERNPNI- 82 (121)
T ss_dssp HHHHHHHHHTTBEEEEEESS----B----HHHHHHHHHH-----TTCSEEEEEESS--STHHHHHHHHHHHHHTTCTTS-
T ss_pred HHHHHHHHHCCCeEEEECCC----CC---HHHHHHHHhc-----CCCcEEEEEccC--cCcHHHHHHHHHHHHhcCCCC-
Confidence 44444457789999998542 11 3666666653 578888887543 34456677888887776 78
Q ss_pred EEEEecccccCCccccccc-cCccEEEEc
Q 012991 223 QVFVDAAHAMGSIKIDVKE-IGADFYVSN 250 (452)
Q Consensus 223 ~~ivD~a~~~g~~~~~~~~-~~~d~~~~s 250 (452)
.+++=|.+.......-+.. .++|.++.+
T Consensus 83 ~iv~GG~~~t~~~~~~l~~~~~~D~vv~G 111 (121)
T PF02310_consen 83 PIVVGGPHATADPEEILREYPGIDYVVRG 111 (121)
T ss_dssp EEEEEESSSGHHHHHHHHHHHTSEEEEEE
T ss_pred EEEEECCchhcChHHHhccCcCcceecCC
Confidence 7888887643221111111 366766553
No 405
>PRK12723 flagellar biosynthesis regulator FlhF; Provisional
Probab=59.26 E-value=1.6e+02 Score=29.02 Aligned_cols=88 Identities=18% Similarity=0.264 Sum_probs=52.1
Q ss_pred CCCEEEEe--CCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCccc
Q 012991 129 RNDTVLML--HCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVV 206 (452)
Q Consensus 129 ~g~~Vl~~--~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~ 206 (452)
.|.+|.+. ++...+....+..+++..|+.+.... . .+++.+.+.+ ..+..+|++..+.......
T Consensus 205 ~g~~V~lit~Dt~R~aa~eQL~~~a~~lgvpv~~~~------~----~~~l~~~L~~----~~~~DlVLIDTaGr~~~~~ 270 (388)
T PRK12723 205 KSLNIKIITIDNYRIGAKKQIQTYGDIMGIPVKAIE------S----FKDLKEEITQ----SKDFDLVLVDTIGKSPKDF 270 (388)
T ss_pred CCCeEEEEeccCccHHHHHHHHHHhhcCCcceEeeC------c----HHHHHHHHHH----hCCCCEEEEcCCCCCccCH
Confidence 34555543 33334444556666777787665441 1 3555655544 2457899998876655444
Q ss_pred ccHHHHHHHHHHc----CCCEEEEecccc
Q 012991 207 IPVRKLVKICRDE----GVDQVFVDAAHA 231 (452)
Q Consensus 207 ~~l~~i~~l~~~~----~~~~~ivD~a~~ 231 (452)
..+.++.++.... .+ ++++|++..
T Consensus 271 ~~l~el~~~l~~~~~~~e~-~LVlsat~~ 298 (388)
T PRK12723 271 MKLAEMKELLNACGRDAEF-HLAVSSTTK 298 (388)
T ss_pred HHHHHHHHHHHhcCCCCeE-EEEEcCCCC
Confidence 4566777766643 46 688997654
No 406
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=57.85 E-value=86 Score=24.73 Aligned_cols=91 Identities=16% Similarity=0.232 Sum_probs=54.5
Q ss_pred HHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHc---C
Q 012991 144 KKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDE---G 220 (452)
Q Consensus 144 ~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~---~ 220 (452)
...+..+.+..|.++..+....+ .+++.+.+. ..++++|.++... +.....+.++++.+++. +
T Consensus 16 ~~~~~~~l~~~G~~V~~lg~~~~-------~~~l~~~~~-----~~~pdvV~iS~~~--~~~~~~~~~~i~~l~~~~~~~ 81 (119)
T cd02067 16 KNIVARALRDAGFEVIDLGVDVP-------PEEIVEAAK-----EEDADAIGLSGLL--TTHMTLMKEVIEELKEAGLDD 81 (119)
T ss_pred HHHHHHHHHHCCCEEEECCCCCC-------HHHHHHHHH-----HcCCCEEEEeccc--cccHHHHHHHHHHHHHcCCCC
Confidence 34555556778999977732111 456666665 4678888887542 23345677777777776 5
Q ss_pred CCEEEEecccccCCccccccccCccEEEEc
Q 012991 221 VDQVFVDAAHAMGSIKIDVKEIGADFYVSN 250 (452)
Q Consensus 221 ~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s 250 (452)
+ .+++=|.+.... +-.....++|.+..+
T Consensus 82 ~-~i~vGG~~~~~~-~~~~~~~G~D~~~~~ 109 (119)
T cd02067 82 I-PVLVGGAIVTRD-FKFLKEIGVDAYFGP 109 (119)
T ss_pred C-eEEEECCCCChh-HHHHHHcCCeEEECC
Confidence 6 677777653321 112344567766654
No 407
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=55.48 E-value=1.1e+02 Score=28.62 Aligned_cols=80 Identities=13% Similarity=0.213 Sum_probs=44.8
Q ss_pred CCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCC-hHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccc
Q 012991 129 RNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLAS-EEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVI 207 (452)
Q Consensus 129 ~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~-~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~ 207 (452)
++..+++..+.|. .+++.+|+++..+.-..+..+ .-.-+.++.+.++ ..+.++|+.+...++
T Consensus 170 ~~~~~v~~H~af~-------Y~~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik-----~~~v~~if~e~~~~~----- 232 (282)
T cd01017 170 KGKTFVTQHAAFG-------YLARRYGLKQIAIVGVSPEVEPSPKQLAELVEFVK-----KSDVKYIFFEENASS----- 232 (282)
T ss_pred CCCeEEEecccHH-------HHHHHCCCeEEecccCCCCCCCCHHHHHHHHHHHH-----HcCCCEEEEeCCCCh-----
Confidence 3566777666553 336778999876421101111 1111556666665 356778877654432
Q ss_pred cHHHHHHHHHHcCCCEEEEe
Q 012991 208 PVRKLVKICRDEGVDQVFVD 227 (452)
Q Consensus 208 ~l~~i~~l~~~~~~~~~ivD 227 (452)
+.+..++++.|+..+.+|
T Consensus 233 --~~~~~la~~~g~~v~~ld 250 (282)
T cd01017 233 --KIAETLAKETGAKLLVLN 250 (282)
T ss_pred --HHHHHHHHHcCCcEEEec
Confidence 445568888898433446
No 408
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=53.26 E-value=66 Score=33.02 Aligned_cols=85 Identities=14% Similarity=0.140 Sum_probs=52.4
Q ss_pred HhcC-cEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHc--CCCEEEEe
Q 012991 152 TRAG-GSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDE--GVDQVFVD 227 (452)
Q Consensus 152 ~~~g-~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~--~~~~~ivD 227 (452)
+..| .++..++... ..+ .+++.+.+. ..++++|.++.. |.......++++.+|+. ++ .+++=
T Consensus 33 ~~~G~~~V~iiD~~~-----~~~~~~~~~~~l~-----~~~pdvVgis~~---t~~~~~a~~~~~~~k~~~P~~-~iV~G 98 (497)
T TIGR02026 33 LDAGYHDVTFLDAMT-----GPLTDEKLVERLR-----AHCPDLVLITAI---TPAIYIACETLKFARERLPNA-IIVLG 98 (497)
T ss_pred HhcCCcceEEecccc-----cCCCHHHHHHHHH-----hcCcCEEEEecC---cccHHHHHHHHHHHHHHCCCC-EEEEc
Confidence 4568 6888885321 112 466777675 357899988743 44556677888888887 89 79998
Q ss_pred cccccCCcccccc-ccCccEEEEc
Q 012991 228 AAHAMGSIKIDVK-EIGADFYVSN 250 (452)
Q Consensus 228 ~a~~~g~~~~~~~-~~~~d~~~~s 250 (452)
|.|+.....--+. ...+|+++.+
T Consensus 99 G~h~t~~~~~~l~~~p~vD~Vv~G 122 (497)
T TIGR02026 99 GIHPTFMFHQVLTEAPWIDFIVRG 122 (497)
T ss_pred CCCcCcCHHHHHhcCCCccEEEeC
Confidence 8875432211111 1246776643
No 409
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=51.96 E-value=2.1e+02 Score=27.02 Aligned_cols=117 Identities=11% Similarity=0.121 Sum_probs=64.2
Q ss_pred HHHHHHHHHhHhC--CCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCC--EEEE--eCCcchhHHHHHHHHHHhcC
Q 012991 82 ILESRAAVKDLIN--ADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRND--TVLM--LHCAFQAVKKSIQAYVTRAG 155 (452)
Q Consensus 82 ~~~~~~~la~~~~--~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~--~Vl~--~~~~~~s~~~~~~~~a~~~g 155 (452)
.+++++.+++.-- . ....+++|.|.+.++..++... .+.+. +|++ +.|.+.+. ..+..+ +..|
T Consensus 102 ~~~a~~~ia~~~a~~i-~dg~~IlTh~~S~~v~~~l~~A--------~~~~k~~~V~VtESRP~~eG~-~~ak~L-~~~g 170 (301)
T COG1184 102 VEKAKERIAEIGAERI-HDGDVILTHSFSKTVLEVLKTA--------ADRGKRFKVIVTESRPRGEGR-IMAKEL-RQSG 170 (301)
T ss_pred HHHHHHHHHHHHHhhc-cCCCEEEEecCcHHHHHHHHHh--------hhcCCceEEEEEcCCCcchHH-HHHHHH-HHcC
Confidence 4445555544321 1 1357888877666666665543 24443 5555 37788764 455555 5568
Q ss_pred cEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCccccc---HHHHHHHHHHcCCCEEEEe
Q 012991 156 GSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGVDQVFVD 227 (452)
Q Consensus 156 ~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ivD 227 (452)
+++..+ + |. +.-..++ .-.++++=.+.-...|.++. ...|+..||+.++| +++=
T Consensus 171 I~~~~I----~-Ds------a~~~~~~------~vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~P-f~v~ 227 (301)
T COG1184 171 IPVTVI----V-DS------AVGAFMS------RVDKVLVGADAILANGALVNKIGTSPLALAARELRVP-FYVV 227 (301)
T ss_pred CceEEE----e-ch------HHHHHHH------hCCEEEECccceecCCcEEeccchHHHHHHHHHhCCC-EEEE
Confidence 888887 2 21 1122221 22233333333334566654 45788899999995 6654
No 410
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=50.33 E-value=1.4e+02 Score=24.46 Aligned_cols=77 Identities=19% Similarity=0.254 Sum_probs=49.8
Q ss_pred chhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHc
Q 012991 140 FQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDE 219 (452)
Q Consensus 140 ~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~ 219 (452)
|.--...+..+.+..|.++..+.. +.. ++++.++.. .+++.+|.++...+ .....++++.+.+++.
T Consensus 14 HdiGk~iv~~~l~~~GfeVi~LG~----~v~---~e~~v~aa~-----~~~adiVglS~l~~--~~~~~~~~~~~~l~~~ 79 (134)
T TIGR01501 14 HAVGNKILDHAFTNAGFNVVNLGV----LSP---QEEFIKAAI-----ETKADAILVSSLYG--HGEIDCKGLRQKCDEA 79 (134)
T ss_pred hhHhHHHHHHHHHHCCCEEEECCC----CCC---HHHHHHHHH-----HcCCCEEEEecccc--cCHHHHHHHHHHHHHC
Confidence 444444555556788999998843 211 455555554 36888999987653 4455688899888887
Q ss_pred C---CCEEEEecccc
Q 012991 220 G---VDQVFVDAAHA 231 (452)
Q Consensus 220 ~---~~~~ivD~a~~ 231 (452)
+ . .+++=|+-.
T Consensus 80 gl~~~-~vivGG~~v 93 (134)
T TIGR01501 80 GLEGI-LLYVGGNLV 93 (134)
T ss_pred CCCCC-EEEecCCcC
Confidence 5 4 566665433
No 411
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=50.01 E-value=1.4e+02 Score=24.45 Aligned_cols=77 Identities=16% Similarity=0.192 Sum_probs=50.6
Q ss_pred cchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHH
Q 012991 139 AFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRD 218 (452)
Q Consensus 139 ~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~ 218 (452)
.|.--...+..+.+..|.++..+....| ++++.+++. ..++++|.++...+ .....++++.+.+++
T Consensus 15 ~H~lG~~iv~~~lr~~G~eVi~LG~~vp-------~e~i~~~a~-----~~~~d~V~lS~~~~--~~~~~~~~~~~~L~~ 80 (137)
T PRK02261 15 CHAVGNKILDRALTEAGFEVINLGVMTS-------QEEFIDAAI-----ETDADAILVSSLYG--HGEIDCRGLREKCIE 80 (137)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCC-------HHHHHHHHH-----HcCCCEEEEcCccc--cCHHHHHHHHHHHHh
Confidence 3444445666667888999999843221 566666665 46888998876554 334456777777777
Q ss_pred c---CCCEEEEeccc
Q 012991 219 E---GVDQVFVDAAH 230 (452)
Q Consensus 219 ~---~~~~~ivD~a~ 230 (452)
. ++ .+++=|+-
T Consensus 81 ~~~~~~-~i~vGG~~ 94 (137)
T PRK02261 81 AGLGDI-LLYVGGNL 94 (137)
T ss_pred cCCCCC-eEEEECCC
Confidence 6 56 57777654
No 412
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=49.42 E-value=34 Score=30.00 Aligned_cols=37 Identities=16% Similarity=0.227 Sum_probs=29.7
Q ss_pred CCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEE
Q 012991 188 GKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFV 226 (452)
Q Consensus 188 ~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~iv 226 (452)
+-.|..|+++ .-|..|.....+++.++|++||+ .++.
T Consensus 154 Gl~Pa~VicE-i~~~dG~mar~~~~~~fa~~h~l-~~it 190 (203)
T COG0108 154 GLKPAGVICE-IMNDDGTMARLPELEEFAKEHGL-PVIT 190 (203)
T ss_pred CCCCcEEEEE-EeCCCccccChHHHHHHHHHcCC-cEEE
Confidence 5677666665 56679999999999999999999 4553
No 413
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=49.02 E-value=1e+02 Score=27.91 Aligned_cols=74 Identities=22% Similarity=0.260 Sum_probs=47.3
Q ss_pred hhHHHHHHHHHHhcCcEEEEE-eCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHc
Q 012991 141 QAVKKSIQAYVTRAGGSVVEV-QLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDE 219 (452)
Q Consensus 141 ~s~~~~~~~~a~~~g~~v~~~-~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~ 219 (452)
......+...|+..|..+..+ +- ..+.....+.+++++. .+++.|++..... .....+.+-|++.
T Consensus 14 ~~~~~g~~~~a~~~g~~~~~~~~~---~~d~~~q~~~i~~~i~------~~~d~Iiv~~~~~-----~~~~~~l~~~~~~ 79 (257)
T PF13407_consen 14 QQVIKGAKAAAKELGYEVEIVFDA---QNDPEEQIEQIEQAIS------QGVDGIIVSPVDP-----DSLAPFLEKAKAA 79 (257)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEES---TTTHHHHHHHHHHHHH------TTESEEEEESSST-----TTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCEEEEeCCC---CCCHHHHHHHHHHHHH------hcCCEEEecCCCH-----HHHHHHHHHHhhc
Confidence 335566667688889999885 32 1222233788888884 5688888765443 1344566778888
Q ss_pred CCCEEEEec
Q 012991 220 GVDQVFVDA 228 (452)
Q Consensus 220 ~~~~~ivD~ 228 (452)
|++++.+|.
T Consensus 80 gIpvv~~d~ 88 (257)
T PF13407_consen 80 GIPVVTVDS 88 (257)
T ss_dssp TSEEEEESS
T ss_pred CceEEEEec
Confidence 995444453
No 414
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=48.31 E-value=35 Score=31.33 Aligned_cols=29 Identities=17% Similarity=0.366 Sum_probs=23.8
Q ss_pred cccHHHHHHHHHHcCCCEEEEecccccCCc
Q 012991 206 VIPVRKLVKICRDEGVDQVFVDAAHAMGSI 235 (452)
Q Consensus 206 ~~~l~~i~~l~~~~~~~~~ivD~a~~~g~~ 235 (452)
..++..|..+.++.++ ++++|-+|+.|..
T Consensus 170 ~~dl~ai~~lk~~~~l-PVivd~SHs~G~r 198 (250)
T PRK13397 170 MLDIMAVPIIQQKTDL-PIIVDVSHSTGRR 198 (250)
T ss_pred ccCHHHHHHHHHHhCC-CeEECCCCCCccc
Confidence 5678888888888999 6999999987753
No 415
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=46.92 E-value=1.5e+02 Score=27.42 Aligned_cols=84 Identities=7% Similarity=0.089 Sum_probs=49.8
Q ss_pred CEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccc---
Q 012991 131 DTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVI--- 207 (452)
Q Consensus 131 ~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~--- 207 (452)
|-|++++..+.-. .-+...++..|..+..+-. |... .+.++...+ .-...|++.+....||...
T Consensus 121 dgviipDLP~ee~-~~~~~~~~~~gi~~I~lv~--PtT~----~eri~~i~~------~a~gFIY~vS~~GvTG~~~~~~ 187 (263)
T CHL00200 121 KGLIIPDLPYEES-DYLISVCNLYNIELILLIA--PTSS----KSRIQKIAR------AAPGCIYLVSTTGVTGLKTELD 187 (263)
T ss_pred eEEEecCCCHHHH-HHHHHHHHHcCCCEEEEEC--CCCC----HHHHHHHHH------hCCCcEEEEcCCCCCCCCcccc
Confidence 6788876655433 3344447888887777654 2222 245555442 2234666655667788853
Q ss_pred -cHHHHHHHHHHc-CCCEEEEec
Q 012991 208 -PVRKLVKICRDE-GVDQVFVDA 228 (452)
Q Consensus 208 -~l~~i~~l~~~~-~~~~~ivD~ 228 (452)
.++++.+..|++ +. ++++|.
T Consensus 188 ~~~~~~i~~ir~~t~~-Pi~vGF 209 (263)
T CHL00200 188 KKLKKLIETIKKMTNK-PIILGF 209 (263)
T ss_pred HHHHHHHHHHHHhcCC-CEEEEC
Confidence 255666666665 78 588873
No 416
>COG0656 ARA1 Aldo/keto reductases, related to diketogulonate reductase [General function prediction only]
Probab=44.15 E-value=2.1e+02 Score=26.86 Aligned_cols=144 Identities=11% Similarity=0.092 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCCCCcEEEec---Chh-------HHHHHHHHHhhccccc
Q 012991 55 VLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADDVGEISLVD---NAT-------TAAAIVLQQIGRGFTE 124 (452)
Q Consensus 55 v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~i~~t~---g~t-------~a~~~~~~~l~~~~~~ 124 (452)
..+++...+..-...-+...-|+. .+.+-++|++ -|++ .+++++|+ ... .|+...+.-|.
T Consensus 30 ~~~av~~Al~~Gyr~IDTA~~Ygn---E~~VG~aI~~-s~v~-ReelFittKvw~~~~~~~~~~~a~e~Sl~rLg----- 99 (280)
T COG0656 30 AVRAVRAALELGYRLIDTAEIYGN---EEEVGEAIKE-SGVP-REELFITTKVWPSDLGYDETLKALEASLKRLG----- 99 (280)
T ss_pred HHHHHHHHHHhCcceEecHhHhcC---HHHHHHHHHh-cCCC-HHHeEEEeecCCccCCcchHHHHHHHHHHHhC-----
Confidence 555666555432222222222332 3445666666 6665 57887764 111 22222222221
Q ss_pred CCCCCCCEEEEeCCc---chhHHHHHHHHHHhc-CcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccC
Q 012991 125 GRFHRNDTVLMLHCA---FQAVKKSIQAYVTRA-GGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHIT 200 (452)
Q Consensus 125 ~~~~~g~~Vl~~~~~---~~s~~~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~ 200 (452)
+.-=|-.++-.|. +.+....|+.+.+.. ...++.+ .+++.. .+.|+++++.. ...|.+. .--.
T Consensus 100 --~dyvDLyLiHwP~~~~~~~~~etw~alE~l~~~G~ir~I----GVSNF~--~~~L~~l~~~~---~~~p~~N--QIe~ 166 (280)
T COG0656 100 --LDYVDLYLIHWPVPNKYVVIEETWKALEELVDEGLIRAI----GVSNFG--VEHLEELLSLA---KVKPAVN--QIEY 166 (280)
T ss_pred --CCceeEEEECCCCCccCccHHHHHHHHHHHHhcCCccEE----EeeCCC--HHHHHHHHHhc---CCCCceE--EEEe
Confidence 1112555554442 332334454442222 2366666 334433 56666666420 2223222 1111
Q ss_pred CCCcccccHHHHHHHHHHcCCCEEE
Q 012991 201 SMPCVVIPVRKLVKICRDEGVDQVF 225 (452)
Q Consensus 201 n~tG~~~~l~~i~~l~~~~~~~~~i 225 (452)
.-..+-.++.++|+++|+ .+.
T Consensus 167 ---hp~~~q~el~~~~~~~gI-~v~ 187 (280)
T COG0656 167 ---HPYLRQPELLPFCQRHGI-AVE 187 (280)
T ss_pred ---ccCCCcHHHHHHHHHcCC-EEE
Confidence 124456679999999999 554
No 417
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=43.82 E-value=2.2e+02 Score=24.90 Aligned_cols=100 Identities=11% Similarity=0.283 Sum_probs=56.1
Q ss_pred EEEecChhHHHHHHHHHhhcccccCCCCCCCEEE---EeCC-c------chhHHHHHHHHHHhcCcEEEEEeCCCCCCCh
Q 012991 101 ISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVL---MLHC-A------FQAVKKSIQAYVTRAGGSVVEVQLPFPLASE 170 (452)
Q Consensus 101 i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl---~~~~-~------~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~ 170 (452)
++..|||.-+..++..+. +.|.+|+ +..+ . |.........+|+..|++...++++. + .
T Consensus 3 ~v~~SGGkDS~~al~~a~---------~~G~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgipl~~i~~~~--~-~ 70 (194)
T cd01994 3 VALISGGKDSCYALYRAL---------EEGHEVVALLNLTPEEGSSMMYHTVNHELLELQAEAMGIPLIRIEISG--E-E 70 (194)
T ss_pred EEEecCCHHHHHHHHHHH---------HcCCEEEEEEEEecCCCCcccccccCHHHHHHHHHHcCCcEEEEeCCC--C-c
Confidence 456788887766666654 3344332 2211 1 22244566677899999988886632 1 2
Q ss_pred HHHHHHHHHHHhccccCCCceEEEEEeccCCCCccccc---HHHHHHHHHHcCC
Q 012991 171 EEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIP---VRKLVKICRDEGV 221 (452)
Q Consensus 171 ~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~l~~~~~~ 221 (452)
....+.+.+.+++... .....|+. |.+.+ ..++-++|++.|+
T Consensus 71 e~~~~~l~~~l~~~~~--~g~~~vv~-------G~i~sd~~~~~~e~~~~~~gl 115 (194)
T cd01994 71 EDEVEDLKELLRKLKE--EGVDAVVF-------GAILSEYQRTRVERVCERLGL 115 (194)
T ss_pred hHHHHHHHHHHHHHHH--cCCCEEEE-------CccccHHHHHHHHHHHHHcCC
Confidence 2224555555543321 12444443 55543 4578889999988
No 418
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=43.60 E-value=2.3e+02 Score=24.92 Aligned_cols=151 Identities=17% Similarity=0.222 Sum_probs=82.2
Q ss_pred hHHHHHHHHHHHhHhCCCCCCcEEEe--cChhHHHHHHHHHhhcccccCCCCCCCEEEEe--CCcchhH-HHHHHHHHHh
Q 012991 79 RKGILESRAAVKDLINADDVGEISLV--DNATTAAAIVLQQIGRGFTEGRFHRNDTVLML--HCAFQAV-KKSIQAYVTR 153 (452)
Q Consensus 79 ~~~~~~~~~~la~~~~~~~~~~i~~t--~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~--~~~~~s~-~~~~~~~a~~ 153 (452)
.+....+-+.+.+++... ++.+. .=+++.+..++..+...........+.+|++. ..+.|.. ...+..+.+.
T Consensus 32 ~~~l~p~m~~vG~~w~~~---~i~va~e~~as~~~~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~ 108 (201)
T cd02070 32 EEGLAPGMDIVGDKYEEG---EIFVPELLMAADAMKAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEA 108 (201)
T ss_pred HHHHHHHHHHHHHHHccC---CeeHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHH
Confidence 345566666777777653 33322 12334444444444222211111123466654 3344443 4555666788
Q ss_pred cCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHc----CCCEEEEecc
Q 012991 154 AGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDE----GVDQVFVDAA 229 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~----~~~~~ivD~a 229 (452)
.|.++..+....| .+++.+++. ..++.+|.++...+ .....+.++.+..++. ++ .+++=|.
T Consensus 109 ~G~~vi~lG~~~p-------~~~l~~~~~-----~~~~d~v~lS~~~~--~~~~~~~~~i~~lr~~~~~~~~-~i~vGG~ 173 (201)
T cd02070 109 NGFEVIDLGRDVP-------PEEFVEAVK-----EHKPDILGLSALMT--TTMGGMKEVIEALKEAGLRDKV-KVMVGGA 173 (201)
T ss_pred CCCEEEECCCCCC-------HHHHHHHHH-----HcCCCEEEEecccc--ccHHHHHHHHHHHHHCCCCcCC-eEEEECC
Confidence 8999987743211 567777775 46888998876443 3356678877777765 46 5777764
Q ss_pred cccCCccccccccCccEEEEc
Q 012991 230 HAMGSIKIDVKEIGADFYVSN 250 (452)
Q Consensus 230 ~~~g~~~~~~~~~~~d~~~~s 250 (452)
.-. ..-....|+|.+.-+
T Consensus 174 ~~~---~~~~~~~GaD~~~~d 191 (201)
T cd02070 174 PVN---QEFADEIGADGYAED 191 (201)
T ss_pred cCC---HHHHHHcCCcEEECC
Confidence 321 111233467776654
No 419
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=42.48 E-value=3.3e+02 Score=26.38 Aligned_cols=152 Identities=7% Similarity=-0.023 Sum_probs=75.4
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHhHhCCCC--CCcEEEecChhHHHHHHH
Q 012991 38 HGVARINNGSFGSCPKSVLADQQKWQLKFLQQPDDFYFNSLRKGILESRAAVKDLINADD--VGEISLVDNATTAAAIVL 115 (452)
Q Consensus 38 ~~~~~l~~~~~~~~p~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~--~~~i~~t~g~t~a~~~~~ 115 (452)
.+-|.||..+.+.......+. . ... +.+...++++.+.++-+-.. -+.++-.|||--+..++.
T Consensus 13 ~p~i~fd~~GvC~~C~~~~~~--~--------~~~-----~~~~~~~l~~l~~~~k~~~~~~yD~iV~lSGGkDSs~la~ 77 (343)
T TIGR03573 13 RPGITFDEDGVCSACRNFEEK--S--------KID-----WDEREKELEELVDKIKKKGGGRYDCIIGVSGGKDSTYQAH 77 (343)
T ss_pred CCCeeECCCCCchhhhhHHhh--c--------CCC-----HHHHHHHHHHHHHHHHhcCCCCCCEEEECCCCHHHHHHHH
Confidence 345778877777665532211 0 011 12223444444444433221 356677788876555543
Q ss_pred HHhhcccccCCCCCCCEE--EEeCCcchhH--HHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCce
Q 012991 116 QQIGRGFTEGRFHRNDTV--LMLHCAFQAV--KKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMI 191 (452)
Q Consensus 116 ~~l~~~~~~~~~~~g~~V--l~~~~~~~s~--~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~ 191 (452)
.+. . .-|..+ ++.++.+.+- ...+..+++..|+....+.+ +. ..+.+.+.+.+.. ...
T Consensus 78 ll~-~-------~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~----d~-~~~~~l~~~~~~~----~~~- 139 (343)
T TIGR03573 78 VLK-K-------KLGLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITI----NP-ETFRKLQRAYFKK----VGD- 139 (343)
T ss_pred HHH-H-------HhCCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeC----CH-HHHHHHHHHHHhc----cCC-
Confidence 321 1 112233 4445555432 22455667888998888843 21 1112223333321 111
Q ss_pred EEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccc
Q 012991 192 RLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHA 231 (452)
Q Consensus 192 ~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~ 231 (452)
+..+. .......+.++|+++|+ .+|+.|.++
T Consensus 140 -------pc~~c-~~~~~~~l~~~A~~~gi-~~Il~G~~~ 170 (343)
T TIGR03573 140 -------PEWPQ-DHAIFASVYQVALKFNI-PLIIWGENI 170 (343)
T ss_pred -------Cchhh-hhHHHHHHHHHHHHhCC-CEEEeCCCH
Confidence 11111 12235678899999999 699998654
No 420
>TIGR03600 phage_DnaB phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model.
Probab=42.07 E-value=1.6e+02 Score=29.31 Aligned_cols=14 Identities=21% Similarity=0.356 Sum_probs=6.8
Q ss_pred CCCEEEEeCCcchh
Q 012991 129 RNDTVLMLHCAFQA 142 (452)
Q Consensus 129 ~g~~Vl~~~~~~~s 142 (452)
.|..|++.+.+.+.
T Consensus 222 ~g~~v~~fSlEm~~ 235 (421)
T TIGR03600 222 EGKPVLFFSLEMSA 235 (421)
T ss_pred CCCcEEEEECCCCH
Confidence 34455555554443
No 421
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=41.85 E-value=75 Score=27.87 Aligned_cols=52 Identities=13% Similarity=0.121 Sum_probs=35.5
Q ss_pred HHHHHHHhccc-cCCCc-eEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEe
Q 012991 175 NEFKKGIEKGK-KDGKM-IRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVD 227 (452)
Q Consensus 175 ~~l~~~i~~~~-~~~~~-~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD 227 (452)
+.+..++++.. ....+ --+|+++-.+|..|.+.|.+.-+++++++|+ .++.=
T Consensus 95 dAi~~av~rl~~~~~a~~kvvILLTDG~n~~~~i~P~~aAa~lA~~~gV-~iytI 148 (191)
T cd01455 95 EATEFAIKELAAKEDFDEAIVIVLSDANLERYGIQPKKLADALAREPNV-NAFVI 148 (191)
T ss_pred HHHHHHHHHHHhcCcCCCcEEEEEeCCCcCCCCCChHHHHHHHHHhCCC-EEEEE
Confidence 55555555442 22223 3467889899888888888767899999998 66653
No 422
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=41.16 E-value=1.7e+02 Score=22.89 Aligned_cols=81 Identities=10% Similarity=0.173 Sum_probs=49.4
Q ss_pred cchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHH
Q 012991 139 AFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRD 218 (452)
Q Consensus 139 ~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~ 218 (452)
.|.-....+..+.+..|.++..+.. +.. .+.+.+.+. ..++++|.++..... ....++.+.++.++
T Consensus 11 ~h~lg~~~~~~~l~~~G~~v~~l~~----~~~---~~~~~~~i~-----~~~pdiV~iS~~~~~--~~~~~~~~~~~~~~ 76 (125)
T cd02065 11 VHDIGKNIVAIALRDNGFEVIDLGV----DVP---PEEIVEAAK-----EEDADVVGLSALSTT--HMEAMKLVIEALKE 76 (125)
T ss_pred hhhHHHHHHHHHHHHCCCEEEEcCC----CCC---HHHHHHHHH-----HcCCCEEEEecchHh--HHHHHHHHHHHHHh
Confidence 3444445555556888999988843 211 344444554 357889888754322 22345667777777
Q ss_pred c--CCCEEEEecccccCC
Q 012991 219 E--GVDQVFVDAAHAMGS 234 (452)
Q Consensus 219 ~--~~~~~ivD~a~~~g~ 234 (452)
. ++ .+++=|.+....
T Consensus 77 ~p~~~-~ivvGG~~~t~~ 93 (125)
T cd02065 77 LGIDI-PVVVGGAHPTAD 93 (125)
T ss_pred cCCCC-eEEEeCCcCCcc
Confidence 7 48 788888766543
No 423
>TIGR03772 anch_rpt_subst anchored repeat ABC transporter, substrate-binding protein. Members of this protein family are ABC transporter permease subunits as identified by pfam00950, but additionally contain the Actinobacterial insert domain described by TIGR03769. Some homologs (lacking the insert) have been described as transporters of manganese or of chelated iron. Members of this family typically are found along with an ATP-binding cassette protein, a permease, and an LPXTG-anchored protein with two or three copies of the TIGR03769 insert that occurs just once in this protein family.
Probab=41.10 E-value=2.3e+02 Score=28.89 Aligned_cols=78 Identities=15% Similarity=0.176 Sum_probs=46.1
Q ss_pred CCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCC-CChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCccccc
Q 012991 130 NDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPL-ASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIP 208 (452)
Q Consensus 130 g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~-~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~ 208 (452)
+..+++..+.|. .+++++|.++..+--..+. ...-.-+.+|.+.++ ..++++|+++...+. .
T Consensus 371 ~r~vvt~H~af~-------YLa~~YGL~~~~~~~~~~~~ePS~~~L~~Li~~IK-----~~~V~~IF~Epq~~~-----~ 433 (479)
T TIGR03772 371 RRHLITTHDAYS-------YLGQAYGLNIAGFVTPNPAVEPSLADRRRLTRTIE-----NLKVPAVFLEPNLAA-----R 433 (479)
T ss_pred CCEEEEECCcHH-------HHHHHCCCeEEeeeccCCCCCCCHHHHHHHHHHHH-----HcCCCEEEEeCCCCC-----c
Confidence 456777666653 3367789987754211011 111122566666665 467888888755432 2
Q ss_pred HHHHHHHHHHcCCCEEE
Q 012991 209 VRKLVKICRDEGVDQVF 225 (452)
Q Consensus 209 l~~i~~l~~~~~~~~~i 225 (452)
.+.+..++++.|+ .++
T Consensus 434 ~~~l~~IA~e~Gv-~V~ 449 (479)
T TIGR03772 434 STTLNEIADELGV-RVC 449 (479)
T ss_pred hHHHHHHHHHcCC-cEE
Confidence 4567788999998 453
No 424
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=40.88 E-value=2e+02 Score=23.42 Aligned_cols=92 Identities=20% Similarity=0.259 Sum_probs=56.3
Q ss_pred HHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHc---C
Q 012991 144 KKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDE---G 220 (452)
Q Consensus 144 ~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~---~ 220 (452)
.+.+..+.+..|.++..+.. +.. ++.+.++.. .+++.+|.++... +.....++++.+.+++. +
T Consensus 16 kniv~~~L~~~GfeVidLG~----~v~---~e~~v~aa~-----~~~adiVglS~L~--t~~~~~~~~~~~~l~~~gl~~ 81 (128)
T cd02072 16 NKILDHAFTEAGFNVVNLGV----LSP---QEEFIDAAI-----ETDADAILVSSLY--GHGEIDCKGLREKCDEAGLKD 81 (128)
T ss_pred HHHHHHHHHHCCCEEEECCC----CCC---HHHHHHHHH-----HcCCCEEEEeccc--cCCHHHHHHHHHHHHHCCCCC
Confidence 34444445778999998843 211 455555554 3688899997665 34466788998988887 4
Q ss_pred CCEEEEecccccCCccc-----cccccCccEEEEc
Q 012991 221 VDQVFVDAAHAMGSIKI-----DVKEIGADFYVSN 250 (452)
Q Consensus 221 ~~~~ivD~a~~~g~~~~-----~~~~~~~d~~~~s 250 (452)
+ .+++=|+...+.-.. .+.++|+|-+...
T Consensus 82 v-~vivGG~~~i~~~d~~~~~~~L~~~Gv~~vf~p 115 (128)
T cd02072 82 I-LLYVGGNLVVGKQDFEDVEKRFKEMGFDRVFAP 115 (128)
T ss_pred C-eEEEECCCCCChhhhHHHHHHHHHcCCCEEECc
Confidence 5 677777654433222 1444566655443
No 425
>cd06305 PBP1_methylthioribose_binding_like Methylthioribose-binding protein-like of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily. Methylthioribose-binding protein-like of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. The sugar-binding domain of the periplasmic proteins in this group is also homologous to the ligand-binding domain of eukaryotic receptors such as metabotropic glutamate receptor (mGluR), DNA-binding transcriptional repressors such as LacI and GalR.
Probab=40.37 E-value=2.2e+02 Score=25.72 Aligned_cols=76 Identities=20% Similarity=0.213 Sum_probs=43.6
Q ss_pred cchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHH
Q 012991 139 AFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRD 218 (452)
Q Consensus 139 ~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~ 218 (452)
-|......+...++..|..+...... .+.....+.++..+ ..+++.|++..... ....++.+.+++
T Consensus 13 ~~~~~~~gi~~~~~~~g~~~~~~~~~---~~~~~~~~~l~~~~------~~~vdgii~~~~~~-----~~~~~~i~~~~~ 78 (273)
T cd06305 13 FDQAYLAGTKAEAEALGGDLRVYDAG---GDDAKQADQIDQAI------AQKVDAIIIQHGRA-----EVLKPWVKRALD 78 (273)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEECCC---CCHHHHHHHHHHHH------HcCCCEEEEecCCh-----hhhHHHHHHHHH
Confidence 34445566666678889988877321 11111255666666 45677877754321 112334455677
Q ss_pred cCCCEEEEec
Q 012991 219 EGVDQVFVDA 228 (452)
Q Consensus 219 ~~~~~~ivD~ 228 (452)
.|++++.+|.
T Consensus 79 ~~ipvV~~~~ 88 (273)
T cd06305 79 AGIPVVAFDV 88 (273)
T ss_pred cCCCEEEecC
Confidence 8886667774
No 426
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=39.60 E-value=1.7e+02 Score=27.54 Aligned_cols=75 Identities=7% Similarity=0.141 Sum_probs=42.6
Q ss_pred CCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCC-ChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCccccc
Q 012991 130 NDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLA-SEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIP 208 (452)
Q Consensus 130 g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~-~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~ 208 (452)
+..+++.++.|. .+++++|.++..+.-..+.. ..-.-+.++.+.++ ..+.++|+.+...++
T Consensus 177 ~~~~v~~H~af~-------Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik-----~~~v~~if~e~~~~~------ 238 (287)
T cd01137 177 KRKLVTSEGAFS-------YFAKAYGLKEAYLWPINTEEEGTPKQVATLIEQVK-----KEKVPAVFVESTVND------ 238 (287)
T ss_pred cCEEEEecccHH-------HHHHHcCCeEeecccCCCCCCCCHHHHHHHHHHHH-----HhCCCEEEEeCCCCh------
Confidence 456777666653 33677899887642110101 11111455555555 367788877654432
Q ss_pred HHHHHHHHHHcCCCEE
Q 012991 209 VRKLVKICRDEGVDQV 224 (452)
Q Consensus 209 l~~i~~l~~~~~~~~~ 224 (452)
+.+..++++.|+ .+
T Consensus 239 -~~~~~ia~~~gv-~v 252 (287)
T cd01137 239 -RLMKQVAKETGA-KI 252 (287)
T ss_pred -HHHHHHHHHhCC-cc
Confidence 556678898888 44
No 427
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=39.03 E-value=2.9e+02 Score=25.64 Aligned_cols=78 Identities=18% Similarity=0.134 Sum_probs=35.9
Q ss_pred CEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCccccc--
Q 012991 131 DTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIP-- 208 (452)
Q Consensus 131 ~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~-- 208 (452)
|-+++++.-..-. ..+...|++.|+.+..+.. |..+ .+.+++..+ .....|++.+.+-.||...+
T Consensus 124 dGlivpDLP~ee~-~~~~~~~~~~gi~~I~lva--Ptt~----~~rl~~i~~------~a~GFiY~vs~~GvTG~~~~~~ 190 (265)
T COG0159 124 DGLLVPDLPPEES-DELLKAAEKHGIDPIFLVA--PTTP----DERLKKIAE------AASGFIYYVSRMGVTGARNPVS 190 (265)
T ss_pred CEEEeCCCChHHH-HHHHHHHHHcCCcEEEEeC--CCCC----HHHHHHHHH------hCCCcEEEEecccccCCCcccc
Confidence 5555554332221 2333335666666666543 2222 133333331 22245555555556666655
Q ss_pred --HHHHHHHHHHc-CC
Q 012991 209 --VRKLVKICRDE-GV 221 (452)
Q Consensus 209 --l~~i~~l~~~~-~~ 221 (452)
+.++.+-.|++ ++
T Consensus 191 ~~~~~~v~~vr~~~~~ 206 (265)
T COG0159 191 ADVKELVKRVRKYTDV 206 (265)
T ss_pred hhHHHHHHHHHHhcCC
Confidence 44444444554 44
No 428
>PF15608 PELOTA_1: PELOTA RNA binding domain
Probab=38.38 E-value=1.9e+02 Score=22.41 Aligned_cols=66 Identities=9% Similarity=-0.026 Sum_probs=49.2
Q ss_pred HHHHHHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEe
Q 012991 83 LESRAAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQ 162 (452)
Q Consensus 83 ~~~~~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~ 162 (452)
...-+.+++-||.+ +-=.+=+|=.|+...++. +-..+|++.++..+. ...+..+|+..|+.+...+
T Consensus 22 ~~~v~~i~~~~gI~--diN~IKPGIgEaTRvLLR-----------RvP~~vLVr~~~~pd-~~Hl~~LA~ekgVpVe~~~ 87 (100)
T PF15608_consen 22 WAEVERIAERYGIS--DINLIKPGIGEATRVLLR-----------RVPWKVLVRDPDDPD-LAHLLLLAEEKGVPVEVYP 87 (100)
T ss_pred HHHHHHHHHHhCCC--CcccccCChhHHHHHHHh-----------cCCCEEEECCCCCcc-HHHHHHHHHHcCCcEEEeC
Confidence 44566788899996 333667888888777766 456799998887765 4566677999999998873
No 429
>cd06282 PBP1_GntR_like_2 Ligand-binding domain of putative DNA transcription repressors highly similar to that of the repressor specific for gluconate (GntR) which is a member of the LacI-GalR family of bacterial transcription regulators. This group includes the ligand-binding domain of putative DNA transcription repressors highly similar to that of the repressor specific for gluconate (GntR) which is a member of the LacI-GalR family of bacterial transcription regulators. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding
Probab=38.31 E-value=2.4e+02 Score=25.33 Aligned_cols=76 Identities=14% Similarity=0.111 Sum_probs=44.1
Q ss_pred CCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHH
Q 012991 137 HCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKI 215 (452)
Q Consensus 137 ~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l 215 (452)
++.|......+...++..|..+..... +.+... .+.++..+ ..+++.+++...+ +. . .+..+.
T Consensus 11 ~~~~~~~~~~i~~~~~~~g~~~~~~~~----~~~~~~~~~~~~~l~------~~~vdgiii~~~~-~~----~-~~~~~~ 74 (266)
T cd06282 11 NPVFAECVQGIQEEARAAGYSLLLATT----DYDAEREADAVETLL------RQRVDGLILTVAD-AA----T-SPALDL 74 (266)
T ss_pred cchHHHHHHHHHHHHHHCCCEEEEeeC----CCCHHHHHHHHHHHH------hcCCCEEEEecCC-CC----c-hHHHHH
Confidence 344555666777777888999888743 222222 44455544 4567787775432 11 1 235567
Q ss_pred HHHcCCCEEEEec
Q 012991 216 CRDEGVDQVFVDA 228 (452)
Q Consensus 216 ~~~~~~~~~ivD~ 228 (452)
+++.|++.+++|.
T Consensus 75 ~~~~~ipvV~~~~ 87 (266)
T cd06282 75 LDAERVPYVLAYN 87 (266)
T ss_pred HhhCCCCEEEEec
Confidence 7888985455664
No 430
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=38.24 E-value=2e+02 Score=26.47 Aligned_cols=87 Identities=9% Similarity=0.054 Sum_probs=51.7
Q ss_pred CCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccc
Q 012991 128 HRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVI 207 (452)
Q Consensus 128 ~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~ 207 (452)
.-|++||.-+..-.........+ ...|+.+....+ =.|+...+.+.|+.+. .+.++|+++..=-|| .+
T Consensus 8 ~vG~ElL~G~ivdtNa~~la~~L-~~~G~~v~~~~~--VgD~~~~I~~~l~~a~-------~r~D~vI~tGGLGPT--~D 75 (255)
T COG1058 8 AVGDELLSGRIVDTNAAFLADEL-TELGVDLARITT--VGDNPDRIVEALREAS-------ERADVVITTGGLGPT--HD 75 (255)
T ss_pred EEccceecCceecchHHHHHHHH-HhcCceEEEEEe--cCCCHHHHHHHHHHHH-------hCCCEEEECCCcCCC--cc
Confidence 44778887654433333333443 556988887754 2245455577777776 348899998776665 33
Q ss_pred cHHHHHHHHHHcCCCEEEEec
Q 012991 208 PVRKLVKICRDEGVDQVFVDA 228 (452)
Q Consensus 208 ~l~~i~~l~~~~~~~~~ivD~ 228 (452)
|+-. -.+|+..|. .++.|.
T Consensus 76 DiT~-e~vAka~g~-~lv~~~ 94 (255)
T COG1058 76 DLTA-EAVAKALGR-PLVLDE 94 (255)
T ss_pred HhHH-HHHHHHhCC-CcccCH
Confidence 4332 234555587 577774
No 431
>PRK06372 translation initiation factor IF-2B subunit delta; Provisional
Probab=37.95 E-value=3.3e+02 Score=25.12 Aligned_cols=98 Identities=9% Similarity=0.090 Sum_probs=54.0
Q ss_pred CcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEe--CCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHH
Q 012991 99 GEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLML--HCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINE 176 (452)
Q Consensus 99 ~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~--~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~ 176 (452)
+.+++|-|.+..+...+... +.+.+|++. +|.+.+. .....+ ...|+++..++ +. .
T Consensus 87 ~dvILT~s~S~~v~~~l~~~---------~~~~~V~v~ESrP~~eG~-~~a~~L-~~~GI~vtli~-----Ds------a 144 (253)
T PRK06372 87 DSVIGTISSSQVLKAFISSS---------EKIKSVYILESRPMLEGI-DMAKLL-VKSGIDVVLLT-----DA------S 144 (253)
T ss_pred CCEEEEeCCcHHHHHHHHhc---------CCCCEEEEecCCCchHHH-HHHHHH-HHCCCCEEEEe-----hh------H
Confidence 35888888776766665421 333466664 5666664 333443 34688888772 11 1
Q ss_pred HHHHHhccccCCCceEEEEE-eccCCCCccccc---HHHHHHHHHHcCCCEEEE
Q 012991 177 FKKGIEKGKKDGKMIRLAII-DHITSMPCVVIP---VRKLVKICRDEGVDQVFV 226 (452)
Q Consensus 177 l~~~i~~~~~~~~~~~lv~~-~~~~n~tG~~~~---l~~i~~l~~~~~~~~~iv 226 (452)
+-..+ ++...|++ .+.-...|.+.. -..++-.|+++++ ++++
T Consensus 145 ~~~~m-------~~vd~VlvGAd~V~~nG~v~nkvGT~~~Al~A~~~~v-Pv~V 190 (253)
T PRK06372 145 MCEAV-------LNVDAVIVGSDSVLYDGGLIHKNGTFPLALCARYLKK-PFYS 190 (253)
T ss_pred HHHHH-------HhCCEEEECccEEecCCCEeehhhHHHHHHHHHHcCC-CEEE
Confidence 11223 22333333 222234565543 3467778899999 5777
No 432
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=37.71 E-value=2.9e+02 Score=24.52 Aligned_cols=59 Identities=19% Similarity=0.272 Sum_probs=34.1
Q ss_pred HhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEE
Q 012991 152 TRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFV 226 (452)
Q Consensus 152 ~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~iv 226 (452)
+..|.+++..+ .++ .+.|.++++ ....|++..+........-...+++.|++.|+. .++
T Consensus 41 ~~~g~~vv~~d----~~~----~~~l~~al~-------g~d~v~~~~~~~~~~~~~~~~~li~Aa~~agVk-~~v 99 (233)
T PF05368_consen 41 QALGAEVVEAD----YDD----PESLVAALK-------GVDAVFSVTPPSHPSELEQQKNLIDAAKAAGVK-HFV 99 (233)
T ss_dssp HHTTTEEEES-----TT-----HHHHHHHHT-------TCSEEEEESSCSCCCHHHHHHHHHHHHHHHT-S-EEE
T ss_pred hcccceEeecc----cCC----HHHHHHHHc-------CCceEEeecCcchhhhhhhhhhHHHhhhccccc-eEE
Confidence 44688887652 233 688888884 334444444433222233355789999999984 555
No 433
>cd06319 PBP1_ABC_sugar_binding_like_10 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=36.64 E-value=2e+02 Score=26.13 Aligned_cols=78 Identities=18% Similarity=0.233 Sum_probs=44.5
Q ss_pred CCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHH
Q 012991 137 HCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKIC 216 (452)
Q Consensus 137 ~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~ 216 (452)
++-|......+...++..|.++..+... .+...-.+.+++.+ ..+++.+++..... ....++.+.+
T Consensus 11 ~~~~~~~~~~i~~~~~~~g~~~~~~~~~---~~~~~~~~~i~~~~------~~~~dgiii~~~~~-----~~~~~~l~~~ 76 (277)
T cd06319 11 IPFWQIMGRGVKSKAKALGYDAVELSAE---NSAKKELENLRTAI------DKGVSGIIISPTNS-----SAAVTLLKLA 76 (277)
T ss_pred chHHHHHHHHHHHHHHhcCCeEEEecCC---CCHHHHHHHHHHHH------hcCCCEEEEcCCch-----hhhHHHHHHH
Confidence 3345555666666678889888876321 12111245566655 45677777643221 1234556778
Q ss_pred HHcCCCEEEEec
Q 012991 217 RDEGVDQVFVDA 228 (452)
Q Consensus 217 ~~~~~~~~ivD~ 228 (452)
++.+++++++|-
T Consensus 77 ~~~~ipvV~~~~ 88 (277)
T cd06319 77 AQAKIPVVIADI 88 (277)
T ss_pred HHCCCCEEEEec
Confidence 888985555653
No 434
>cd06318 PBP1_ABC_sugar_binding_like_9 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=36.31 E-value=2.2e+02 Score=25.97 Aligned_cols=75 Identities=17% Similarity=0.240 Sum_probs=42.2
Q ss_pred cchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHH
Q 012991 139 AFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICR 217 (452)
Q Consensus 139 ~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~ 217 (452)
-|......+...++..|..+..... ..+..- .+.++..+ ..+++.|++.... + ..+.++.+.++
T Consensus 13 ~~~~~~~~i~~~~~~~g~~v~~~~~----~~~~~~~~~~i~~~~------~~~~Dgiii~~~~-~----~~~~~~i~~~~ 77 (282)
T cd06318 13 FFAALTEAAKAHAKALGYELISTDA----QGDLTKQIADVEDLL------TRGVNVLIINPVD-P----EGLVPAVAAAK 77 (282)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEcC----CCCHHHHHHHHHHHH------HcCCCEEEEecCC-c----cchHHHHHHHH
Confidence 3444555666667788988877632 222222 45566655 4567777775322 1 11234446667
Q ss_pred HcCCCEEEEec
Q 012991 218 DEGVDQVFVDA 228 (452)
Q Consensus 218 ~~~~~~~ivD~ 228 (452)
+.|++++++|.
T Consensus 78 ~~~iPvV~~~~ 88 (282)
T cd06318 78 AAGVPVVVVDS 88 (282)
T ss_pred HCCCCEEEecC
Confidence 78886566774
No 435
>PRK02308 uvsE putative UV damage endonuclease; Provisional
Probab=36.01 E-value=98 Score=29.42 Aligned_cols=31 Identities=29% Similarity=0.434 Sum_probs=24.6
Q ss_pred CCCCcccccHHHHHHHHHHcCCCEEEEeccccc
Q 012991 200 TSMPCVVIPVRKLVKICRDEGVDQVFVDAAHAM 232 (452)
Q Consensus 200 ~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~~ 232 (452)
.|..|. +.++++..+|++.++ +++.|..|..
T Consensus 186 EN~~~~-~t~~ell~I~e~~~i-pv~~D~hH~~ 216 (303)
T PRK02308 186 ENDDKT-YTVEELLYICEKLGI-PVVFDYHHHM 216 (303)
T ss_pred eeCCCC-CCHHHHHHHHHHcCC-CEEEeHHhhh
Confidence 344454 899999999999999 6999966643
No 436
>cd06281 PBP1_LacI_like_5 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=35.61 E-value=2.8e+02 Score=25.13 Aligned_cols=76 Identities=13% Similarity=0.065 Sum_probs=44.6
Q ss_pred CCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHH
Q 012991 137 HCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKI 215 (452)
Q Consensus 137 ~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l 215 (452)
++-|......+...++..|..+..... ..+..- ...++..+ ..+...|++..... +.+.+.+.
T Consensus 11 ~~~~~~~~~~i~~~a~~~g~~~~~~~~----~~~~~~~~~~i~~l~------~~~vdgii~~~~~~------~~~~~~~~ 74 (269)
T cd06281 11 NPLLAQLFSGAEDRLRAAGYSLLIANS----LNDPERELEILRSFE------QRRMDGIIIAPGDE------RDPELVDA 74 (269)
T ss_pred cccHHHHHHHHHHHHHHcCCEEEEEeC----CCChHHHHHHHHHHH------HcCCCEEEEecCCC------CcHHHHHH
Confidence 444666667777778888998877642 212212 34444444 35677776643221 23456677
Q ss_pred HHHcCCCEEEEec
Q 012991 216 CRDEGVDQVFVDA 228 (452)
Q Consensus 216 ~~~~~~~~~ivD~ 228 (452)
+++.+++.+++|-
T Consensus 75 ~~~~~ipvV~i~~ 87 (269)
T cd06281 75 LASLDLPIVLLDR 87 (269)
T ss_pred HHhCCCCEEEEec
Confidence 7788886566663
No 437
>cd01542 PBP1_TreR_like Ligand-binding domain of DNA transcription repressor specific for trehalose (TreR) which is a member of the LacI-GalR family of bacterial transcription regulators. Ligand-binding domain of DNA transcription repressor specific for trehalose (TreR) which is a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of TreR is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type I periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type I periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding wh
Probab=35.57 E-value=2.5e+02 Score=25.09 Aligned_cols=75 Identities=16% Similarity=0.046 Sum_probs=42.6
Q ss_pred CcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHH
Q 012991 138 CAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICR 217 (452)
Q Consensus 138 ~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~ 217 (452)
+.+......+...++..|.++...... .+.....+.+++.+ ..+++.+++..... + ..+.+.++
T Consensus 12 ~~~~~~~~gi~~~~~~~g~~~~~~~~~---~~~~~~~~~i~~l~------~~~~dgii~~~~~~------~-~~~~~~~~ 75 (259)
T cd01542 12 FSTSRTVKGILAALYENGYQMLLMNTN---FSIEKEIEALELLA------RQKVDGIILLATTI------T-DEHREAIK 75 (259)
T ss_pred chHHHHHHHHHHHHHHCCCEEEEEeCC---CCHHHHHHHHHHHH------hcCCCEEEEeCCCC------C-HHHHHHHh
Confidence 334445666666677889988877431 11122255566655 46777877764321 2 34445566
Q ss_pred HcCCCEEEEec
Q 012991 218 DEGVDQVFVDA 228 (452)
Q Consensus 218 ~~~~~~~ivD~ 228 (452)
+.+++++.+|.
T Consensus 76 ~~~ipvv~~~~ 86 (259)
T cd01542 76 KLNVPVVVVGQ 86 (259)
T ss_pred cCCCCEEEEec
Confidence 67875555653
No 438
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=35.13 E-value=1.6e+02 Score=27.80 Aligned_cols=55 Identities=5% Similarity=0.147 Sum_probs=31.3
Q ss_pred CcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeC
Q 012991 99 GEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQL 163 (452)
Q Consensus 99 ~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~ 163 (452)
+-+++|.||+.-=..++.-+ .+.|.++++.+-.=.++....... +..| +++.+..
T Consensus 39 ~~vLITGgg~GlGr~ialef--------a~rg~~~vl~Din~~~~~etv~~~-~~~g-~~~~y~c 93 (300)
T KOG1201|consen 39 EIVLITGGGSGLGRLIALEF--------AKRGAKLVLWDINKQGNEETVKEI-RKIG-EAKAYTC 93 (300)
T ss_pred CEEEEeCCCchHHHHHHHHH--------HHhCCeEEEEeccccchHHHHHHH-HhcC-ceeEEEe
Confidence 45566766654334444434 366777777666656666666664 3335 5665543
No 439
>PRK15408 autoinducer 2-binding protein lsrB; Provisional
Probab=35.01 E-value=4.2e+02 Score=25.46 Aligned_cols=76 Identities=13% Similarity=0.057 Sum_probs=44.7
Q ss_pred cchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHH
Q 012991 139 AFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICR 217 (452)
Q Consensus 139 ~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~ 217 (452)
-|.....++...++..|.++.... +.+.+..- .+.++..+ ..++..|++.. ..+. .+....+-++
T Consensus 37 f~~~~~~Gi~~aa~~~G~~v~~~~---~~~~d~~~q~~~i~~li------~~~vdgIiv~~-~d~~----al~~~l~~a~ 102 (336)
T PRK15408 37 FFTSGGNGAKEAGKELGVDVTYDG---PTEPSVSGQVQLINNFV------NQGYNAIIVSA-VSPD----GLCPALKRAM 102 (336)
T ss_pred HHHHHHHHHHHHHHHhCCEEEEEC---CCCCCHHHHHHHHHHHH------HcCCCEEEEec-CCHH----HHHHHHHHHH
Confidence 344555667777888898887632 22222222 56677777 46788887752 2221 2345556677
Q ss_pred HcCCCEEEEec
Q 012991 218 DEGVDQVFVDA 228 (452)
Q Consensus 218 ~~~~~~~ivD~ 228 (452)
+.|++.+.+|.
T Consensus 103 ~~gIpVV~~d~ 113 (336)
T PRK15408 103 QRGVKVLTWDS 113 (336)
T ss_pred HCCCeEEEeCC
Confidence 88985566664
No 440
>PF06153 DUF970: Protein of unknown function (DUF970); InterPro: IPR010375 This is a family of uncharacterised bacterial proteins.; PDB: 3M05_A.
Probab=34.87 E-value=90 Score=24.57 Aligned_cols=57 Identities=14% Similarity=0.059 Sum_probs=33.8
Q ss_pred hhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHHhc
Q 012991 370 EDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLVEE 442 (452)
Q Consensus 370 ~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~~~ 442 (452)
+.++..+.+.|.+ +|+.+......++ +.+.|..-+=++ ..+++++.+++.|++..+.
T Consensus 10 d~Da~~l~~~L~~-~g~~~TkLsstGG-------------FLr~GNtTlliG--vede~v~~vl~iIk~~c~~ 66 (109)
T PF06153_consen 10 DEDADDLSDALNE-NGFRVTKLSSTGG-------------FLREGNTTLLIG--VEDEKVDEVLEIIKENCKK 66 (109)
T ss_dssp HHHHHHHHHHHHH-TT--EEEEEEEET-------------TTTEEEEEEEEE--EEGGGHHHHHHHHHHHH--
T ss_pred HhhHHHHHHHHHH-CCceEEEEecccc-------------eeccCCEEEEEE--ecHHHHHHHHHHHHHhhcC
Confidence 5688899999977 4999843222111 233333333233 2688899999999998863
No 441
>cd06300 PBP1_ABC_sugar_binding_like_1 Periplasmic sugar-binding component of uncharacterized ABC-type transport systems that are members of the pentose/hexose sugar-binding protein family of the type I periplasmic binding protein superfamily. Periplasmic sugar-binding component of uncharacterized ABC-type transport systems that are members of the pentose/hexose sugar-binding protein family of the type I periplasmic binding protein superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. Members of this group are predicted to be involved in the transport of sugar-containing molecules across cellular and organellar membranes; however their substrate specificity is not known in detail.
Probab=33.75 E-value=2.3e+02 Score=25.66 Aligned_cols=76 Identities=12% Similarity=0.159 Sum_probs=43.0
Q ss_pred CcchhHHHHHHHHHHhc---Cc--EEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHH
Q 012991 138 CAFQAVKKSIQAYVTRA---GG--SVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRK 211 (452)
Q Consensus 138 ~~~~s~~~~~~~~a~~~---g~--~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~ 211 (452)
+-|.....++...++.. |. ++...+ .+.+... .+.++..+ ..++..|++..... ..+.+
T Consensus 12 ~~~~~~~~~i~~~~~~~~~~g~~~~l~i~~----~~~~~~~~~~~~~~~~------~~~vdgiIi~~~~~-----~~~~~ 76 (272)
T cd06300 12 TWRAQMLDEFKAQAKELKKAGLISEFIVTS----ADGDVAQQIADIRNLI------AQGVDAIIINPASP-----TALNP 76 (272)
T ss_pred hHHHHHHHHHHHHHHhhhccCCeeEEEEec----CCCCHHHHHHHHHHHH------HcCCCEEEEeCCCh-----hhhHH
Confidence 33445666776767777 76 444442 2222222 56666666 46788888865321 12344
Q ss_pred HHHHHHHcCCCEEEEec
Q 012991 212 LVKICRDEGVDQVFVDA 228 (452)
Q Consensus 212 i~~l~~~~~~~~~ivD~ 228 (452)
+.+.+++.+++++.+|.
T Consensus 77 ~l~~~~~~~iPvv~~~~ 93 (272)
T cd06300 77 VIEEACEAGIPVVSFDG 93 (272)
T ss_pred HHHHHHHCCCeEEEEec
Confidence 55667778885455574
No 442
>PF00532 Peripla_BP_1: Periplasmic binding proteins and sugar binding domain of LacI family; InterPro: IPR001761 This family includes the periplasmic binding proteins, and the LacI family transcriptional regulators. The periplasmic binding proteins are the primary receptors for chemotaxis and transport of many sugar based solutes. The LacI family of proteins consist of transcriptional regulators related to the lac repressor. In this case, generally the sugar binding domain binds a sugar which changes the DNA binding activity of the repressor domain (lacI) [, ].; PDB: 1BAP_A 7ABP_A 6ABP_A 1ABF_A 5ABP_A 2WRZ_B 9ABP_A 1APB_A 1ABE_A 8ABP_A ....
Probab=33.18 E-value=1.9e+02 Score=26.93 Aligned_cols=80 Identities=14% Similarity=0.186 Sum_probs=48.5
Q ss_pred EEEeC---CcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccH
Q 012991 133 VLMLH---CAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPV 209 (452)
Q Consensus 133 Vl~~~---~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l 209 (452)
|++++ |-|.....++...++..|..+..... +++....+.++... ..+++.+++.... .+.
T Consensus 6 vivp~~~npff~~ii~gIe~~a~~~Gy~l~l~~t----~~~~~~e~~i~~l~------~~~vDGiI~~s~~------~~~ 69 (279)
T PF00532_consen 6 VIVPDISNPFFAEIIRGIEQEAREHGYQLLLCNT----GDDEEKEEYIELLL------QRRVDGIILASSE------NDD 69 (279)
T ss_dssp EEESSSTSHHHHHHHHHHHHHHHHTTCEEEEEEE----TTTHHHHHHHHHHH------HTTSSEEEEESSS------CTC
T ss_pred EEECCCCCcHHHHHHHHHHHHHHHcCCEEEEecC----CCchHHHHHHHHHH------hcCCCEEEEeccc------CCh
Confidence 45553 34556667777778889998887754 22211124444444 3677777776332 236
Q ss_pred HHHHHHHHHcCCCEEEEecc
Q 012991 210 RKLVKICRDEGVDQVFVDAA 229 (452)
Q Consensus 210 ~~i~~l~~~~~~~~~ivD~a 229 (452)
+.+..+.+. ++|.|++|..
T Consensus 70 ~~l~~~~~~-~iPvV~~~~~ 88 (279)
T PF00532_consen 70 EELRRLIKS-GIPVVLIDRY 88 (279)
T ss_dssp HHHHHHHHT-TSEEEEESS-
T ss_pred HHHHHHHHc-CCCEEEEEec
Confidence 778777777 8866777754
No 443
>cd06309 PBP1_YtfQ_like Periplasmic binding domain of ABC-type YtfQ-like transport systems. Periplasmic binding domain of ABC-type YtfQ-like transport systems. The YtfQ protein from Escherichia coli is up-regulated under glucose-limited conditions and shares homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily. Members of this group are predicted to be involved in the transport of sugar-containing molecules across cellular and organellar membranes; however their ligand specificity is not determined experimentally.
Probab=32.66 E-value=2.5e+02 Score=25.55 Aligned_cols=77 Identities=17% Similarity=0.176 Sum_probs=45.6
Q ss_pred CCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHH
Q 012991 137 HCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKI 215 (452)
Q Consensus 137 ~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l 215 (452)
++-|......+...|+..|.++...+. ..+... .+.++..+ ..+...+++...+ . .....+.+.
T Consensus 11 ~~~~~~~~~~~~~~a~~~g~~~~~~~~----~~~~~~~~~~i~~l~------~~~vdgiIi~~~~-~----~~~~~~i~~ 75 (273)
T cd06309 11 SPWRTAETKSIKDAAEKRGFDLKFADA----QQKQENQISAIRSFI------AQGVDVIILAPVV-E----TGWDPVLKE 75 (273)
T ss_pred CHHHHHHHHHHHHHHHhcCCEEEEeCC----CCCHHHHHHHHHHHH------HcCCCEEEEcCCc-c----ccchHHHHH
Confidence 444556677777778888999988742 222222 45566655 3567777775322 1 122334455
Q ss_pred HHHcCCCEEEEec
Q 012991 216 CRDEGVDQVFVDA 228 (452)
Q Consensus 216 ~~~~~~~~~ivD~ 228 (452)
+++.+++.+.+|.
T Consensus 76 ~~~~~iPvV~~~~ 88 (273)
T cd06309 76 AKAAGIPVILVDR 88 (273)
T ss_pred HHHCCCCEEEEec
Confidence 6778886667774
No 444
>PRK09354 recA recombinase A; Provisional
Probab=32.05 E-value=3e+02 Score=26.72 Aligned_cols=65 Identities=9% Similarity=0.212 Sum_probs=31.7
Q ss_pred CCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCC
Q 012991 128 HRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSM 202 (452)
Q Consensus 128 ~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~ 202 (452)
+.|..++..+.+|..... +++..|..+..+-+. .++..+...+.++..++ ...+++|++.+....
T Consensus 86 ~~G~~~~yId~E~s~~~~----~a~~lGvdld~lli~-qp~~~Eq~l~i~~~li~-----s~~~~lIVIDSvaaL 150 (349)
T PRK09354 86 KAGGTAAFIDAEHALDPV----YAKKLGVDIDNLLVS-QPDTGEQALEIADTLVR-----SGAVDLIVVDSVAAL 150 (349)
T ss_pred HcCCcEEEECCccchHHH----HHHHcCCCHHHeEEe-cCCCHHHHHHHHHHHhh-----cCCCCEEEEeChhhh
Confidence 445666666666544321 245556543222111 12222223444555553 356788888877643
No 445
>cd06294 PBP1_ycjW_transcription_regulator_like Ligand-binding domain of uncharacterized transcription regulator ycjW which is a member of the LacI-GalR family repressors. This group includes the ligand-binding domain of uncharacterized transcription regulator ycjW which is a member of the LacI-GalR family repressors that are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=31.92 E-value=3.3e+02 Score=24.45 Aligned_cols=76 Identities=21% Similarity=0.205 Sum_probs=42.5
Q ss_pred CCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHH
Q 012991 137 HCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKIC 216 (452)
Q Consensus 137 ~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~ 216 (452)
++-|......+...++..|.++..... ++.....+.+...+. ..+++.|++...... ..+.+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~~~~~~~~~-----~~~~dgiii~~~~~~-------~~~~~~~ 79 (270)
T cd06294 16 NPFFIEVLRGISAVANENGYDISLATG----KNEEELLEEVKKMIQ-----QKRVDGFILLYSRED-------DPIIDYL 79 (270)
T ss_pred CCCHHHHHHHHHHHHHHCCCEEEEecC----CCcHHHHHHHHHHHH-----HcCcCEEEEecCcCC-------cHHHHHH
Confidence 344555566666667778988876532 222122455666553 245677666533211 2334556
Q ss_pred HHcCCCEEEEec
Q 012991 217 RDEGVDQVFVDA 228 (452)
Q Consensus 217 ~~~~~~~~ivD~ 228 (452)
++.+++.+.+|-
T Consensus 80 ~~~~ipvV~~~~ 91 (270)
T cd06294 80 KEEKFPFVVIGK 91 (270)
T ss_pred HhcCCCEEEECC
Confidence 777886667774
No 446
>PRK14974 cell division protein FtsY; Provisional
Probab=31.69 E-value=4.8e+02 Score=25.19 Aligned_cols=93 Identities=15% Similarity=0.203 Sum_probs=45.3
Q ss_pred CCCCEEEEeCCc-c-hhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCc
Q 012991 128 HRNDTVLMLHCA-F-QAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPC 204 (452)
Q Consensus 128 ~~g~~Vl~~~~~-~-~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG 204 (452)
..|.+|++...+ | .+....+..+++..|+.+..... .. +-..+ .+.++.+- ..+..+|++..+.....
T Consensus 166 ~~g~~V~li~~Dt~R~~a~eqL~~~a~~lgv~v~~~~~--g~-dp~~v~~~ai~~~~------~~~~DvVLIDTaGr~~~ 236 (336)
T PRK14974 166 KNGFSVVIAAGDTFRAGAIEQLEEHAERLGVKVIKHKY--GA-DPAAVAYDAIEHAK------ARGIDVVLIDTAGRMHT 236 (336)
T ss_pred HcCCeEEEecCCcCcHHHHHHHHHHHHHcCCceecccC--CC-CHHHHHHHHHHHHH------hCCCCEEEEECCCccCC
Confidence 345566544332 3 33334455557777876654321 11 11122 34444432 23456888887654432
Q ss_pred ccccHHHH---HHHHHHcCCCEEEEeccc
Q 012991 205 VVIPVRKL---VKICRDEGVDQVFVDAAH 230 (452)
Q Consensus 205 ~~~~l~~i---~~l~~~~~~~~~ivD~a~ 230 (452)
...-++++ .+.++...+ ++++|+..
T Consensus 237 ~~~lm~eL~~i~~~~~pd~~-iLVl~a~~ 264 (336)
T PRK14974 237 DANLMDELKKIVRVTKPDLV-IFVGDALA 264 (336)
T ss_pred cHHHHHHHHHHHHhhCCceE-EEeecccc
Confidence 22223444 444445566 68888643
No 447
>TIGR02634 xylF D-xylose ABC transporter, substrate-binding protein. Members of this family are periplasmic (when in Gram-negative bacteria) binding proteins for D-xylose import by a high-affinity ATP-binding cassette (ABC) transporter.
Probab=31.56 E-value=2.5e+02 Score=26.24 Aligned_cols=77 Identities=18% Similarity=0.190 Sum_probs=45.2
Q ss_pred CCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHH
Q 012991 137 HCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKI 215 (452)
Q Consensus 137 ~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l 215 (452)
++-|......+...++..|..+..... +.+... .+.++..+ ..+++.|++..... .......+.
T Consensus 10 ~~~~~~~~~~i~~~a~~~g~~v~~~~~----~~~~~~q~~~i~~l~------~~~vDgIIi~~~~~-----~~~~~~l~~ 74 (302)
T TIGR02634 10 LERWQKDRDIFVAAAESLGAKVFVQSA----NGNEAKQISQIENLI------ARGVDVLVIIPQNG-----QVLSNAVQE 74 (302)
T ss_pred hhhHHHHHHHHHHHHHhcCCEEEEEeC----CCCHHHHHHHHHHHH------HcCCCEEEEeCCCh-----hHHHHHHHH
Confidence 334555556666667888988877632 222222 45666666 46788887764321 113445566
Q ss_pred HHHcCCCEEEEec
Q 012991 216 CRDEGVDQVFVDA 228 (452)
Q Consensus 216 ~~~~~~~~~ivD~ 228 (452)
+++.+++.+.+|.
T Consensus 75 ~~~~~iPvV~~d~ 87 (302)
T TIGR02634 75 AKDEGIKVVAYDR 87 (302)
T ss_pred HHHCCCeEEEecC
Confidence 7888985455553
No 448
>cd06292 PBP1_LacI_like_10 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=31.48 E-value=3.5e+02 Score=24.45 Aligned_cols=80 Identities=13% Similarity=0.095 Sum_probs=43.5
Q ss_pred CCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHH
Q 012991 137 HCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKI 215 (452)
Q Consensus 137 ~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l 215 (452)
++-|......+...++..|..+..... ..+... .+.++..+ ..+++.+++....... ........+.
T Consensus 11 ~~~~~~~~~gi~~~~~~~g~~~~~~~~----~~~~~~~~~~i~~l~------~~~vdgiIi~~~~~~~--~~~~~~~i~~ 78 (273)
T cd06292 11 NPIFPAFAEAIEAALAQYGYTVLLCNT----YRGGVSEADYVEDLL------ARGVRGVVFISSLHAD--THADHSHYER 78 (273)
T ss_pred CchHHHHHHHHHHHHHHCCCEEEEEeC----CCChHHHHHHHHHHH------HcCCCEEEEeCCCCCc--ccchhHHHHH
Confidence 445555667777778888998877642 222222 44455555 4567777765432211 1112222344
Q ss_pred HHHcCCCEEEEec
Q 012991 216 CRDEGVDQVFVDA 228 (452)
Q Consensus 216 ~~~~~~~~~ivD~ 228 (452)
+.+.+++.+++|-
T Consensus 79 ~~~~~ipvV~i~~ 91 (273)
T cd06292 79 LAERGLPVVLVNG 91 (273)
T ss_pred HHhCCCCEEEEcC
Confidence 4567885566664
No 449
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=31.47 E-value=4.3e+02 Score=24.56 Aligned_cols=93 Identities=16% Similarity=0.311 Sum_probs=47.8
Q ss_pred CCCCEEEEeCCc-chh-HHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcc
Q 012991 128 HRNDTVLMLHCA-FQA-VKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCV 205 (452)
Q Consensus 128 ~~g~~Vl~~~~~-~~s-~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~ 205 (452)
+.|.+|.+.+.+ |.. ....+..++++.|..+..... +.+......+.++.+. ..+..+|++..+....-.
T Consensus 98 ~~g~~V~li~~D~~r~~a~~ql~~~~~~~~i~~~~~~~--~~dp~~~~~~~l~~~~------~~~~D~ViIDT~G~~~~d 169 (272)
T TIGR00064 98 KQGKSVLLAAGDTFRAAAIEQLEEWAKRLGVDVIKQKE--GADPAAVAFDAIQKAK------ARNIDVVLIDTAGRLQNK 169 (272)
T ss_pred hcCCEEEEEeCCCCCHHHHHHHHHHHHhCCeEEEeCCC--CCCHHHHHHHHHHHHH------HCCCCEEEEeCCCCCcch
Confidence 446666654333 322 223334446777866554321 1121111145555544 345678888877543211
Q ss_pred ---cccHHHHHHHHH------HcCCCEEEEecc
Q 012991 206 ---VIPVRKLVKICR------DEGVDQVFVDAA 229 (452)
Q Consensus 206 ---~~~l~~i~~l~~------~~~~~~~ivD~a 229 (452)
+..++.+.+.++ ..++ ++++|+.
T Consensus 170 ~~~~~el~~~~~~~~~~~~~~~~~~-~LVl~a~ 201 (272)
T TIGR00064 170 VNLMDELKKIKRVIKKVDKDAPDEV-LLVLDAT 201 (272)
T ss_pred HHHHHHHHHHHHHHhcccCCCCceE-EEEEECC
Confidence 123455555666 5678 7999975
No 450
>PRK11633 cell division protein DedD; Provisional
Probab=31.07 E-value=1.6e+02 Score=26.59 Aligned_cols=56 Identities=14% Similarity=0.072 Sum_probs=40.7
Q ss_pred ChhhHHHHHHHHhhhcceEeeecccCCCCCCCCCCCCCCCCCCccceEEecccccCCHHHHHHHHHHHHHHH
Q 012991 369 GEDDALRLRGHLRVRFGVEVPIHYQAPKDDGQPQAGARDKDGIITGYARISHQVYNTLEDYEKFRDAVILLV 440 (452)
Q Consensus 369 ~~~~~~~l~~~L~~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l~~~~ 440 (452)
+..+++.+...|+.. |+-....-.. ...+.+.|+-++.+.+.++.++.+..|+++.
T Consensus 159 n~~~A~~l~~kL~~~-G~~Ay~~~~~---------------~~~G~~tRV~VGP~~sk~~ae~~~~~Lk~~~ 214 (226)
T PRK11633 159 NADKVNEIVAKLRLS-GYRVYTVPST---------------PVQGKITRIYVGPDASKDKLKGSLGELKQLS 214 (226)
T ss_pred CHHHHHHHHHHHHHC-CCeeEEEeee---------------cCCCcEEEEEeCCCCCHHHHHHHHHHHHHhc
Confidence 455788999999764 8876322111 1223577888888889999999999999874
No 451
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=30.90 E-value=3.9e+02 Score=23.84 Aligned_cols=106 Identities=8% Similarity=0.149 Sum_probs=61.7
Q ss_pred CEEEEe--CCcchhH-HHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccc
Q 012991 131 DTVLML--HCAFQAV-KKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVI 207 (452)
Q Consensus 131 ~~Vl~~--~~~~~s~-~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~ 207 (452)
.+|++. ..+.|.. ...+..+.+..|.++..+..+.| ++++.+.+. ..++++|.++...+ ....
T Consensus 89 ~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp-------~e~~v~~~~-----~~~~~~V~lS~~~~--~~~~ 154 (213)
T cd02069 89 GKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVP-------IEKILEAAK-----EHKADIIGLSGLLV--PSLD 154 (213)
T ss_pred CeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCC-------HHHHHHHHH-----HcCCCEEEEccchh--ccHH
Confidence 455543 3344443 34555666888999999843222 567777775 46888988876543 3355
Q ss_pred cHHHHHHHHHHc--CCCEEEEecccccCCcccc---ccccCccEEEEcC
Q 012991 208 PVRKLVKICRDE--GVDQVFVDAAHAMGSIKID---VKEIGADFYVSNL 251 (452)
Q Consensus 208 ~l~~i~~l~~~~--~~~~~ivD~a~~~g~~~~~---~~~~~~d~~~~s~ 251 (452)
.++++.+..++. ++ .+++=|+-......-. ....|+|+++-+.
T Consensus 155 ~~~~~i~~L~~~~~~~-~i~vGG~~~~~~~~~~~~~~~~~gad~y~~da 202 (213)
T cd02069 155 EMVEVAEEMNRRGIKI-PLLIGGAATSRKHTAVKIAPEYDGPVVYVKDA 202 (213)
T ss_pred HHHHHHHHHHhcCCCC-eEEEEChhcCHHHHhhhhccccCCCceEecCH
Confidence 677777777766 46 6777764211000001 1234777776553
No 452
>cd06278 PBP1_LacI_like_2 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=30.75 E-value=3.6e+02 Score=24.15 Aligned_cols=75 Identities=12% Similarity=0.263 Sum_probs=44.0
Q ss_pred CCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHH
Q 012991 137 HCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKIC 216 (452)
Q Consensus 137 ~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~ 216 (452)
++-|......+...++..|..+..+.. +.+....+.+++.+ ..++..+++.... ++ ..+.+.+
T Consensus 11 ~~~~~~~~~~i~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~------~~~vdgiii~~~~-~~------~~~~~~~ 73 (266)
T cd06278 11 NPFYSELLEALSRALQARGYQPLLINT----DDDEDLDAALRQLL------QYRVDGVIVTSGT-LS------SELAEEC 73 (266)
T ss_pred CchHHHHHHHHHHHHHHCCCeEEEEcC----CCCHHHHHHHHHHH------HcCCCEEEEecCC-CC------HHHHHHH
Confidence 344555667777778888999887743 22222245555555 3567777765432 11 1335666
Q ss_pred HHcCCCEEEEec
Q 012991 217 RDEGVDQVFVDA 228 (452)
Q Consensus 217 ~~~~~~~~ivD~ 228 (452)
++.+++++.+|.
T Consensus 74 ~~~~ipvV~~~~ 85 (266)
T cd06278 74 RRNGIPVVLINR 85 (266)
T ss_pred hhcCCCEEEECC
Confidence 777886566664
No 453
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=30.57 E-value=4.2e+02 Score=24.37 Aligned_cols=84 Identities=17% Similarity=0.147 Sum_probs=44.5
Q ss_pred CEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCccc----
Q 012991 131 DTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVV---- 206 (452)
Q Consensus 131 ~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~---- 206 (452)
+-|++++..+... ..+...++..|..+..+-. |... .+.++...+ .....|++.+.+..||..
T Consensus 117 dgviipDlp~ee~-~~~~~~~~~~gl~~i~lv~--P~T~----~eri~~i~~------~~~gfiy~vs~~G~TG~~~~~~ 183 (256)
T TIGR00262 117 DGVLVADLPLEES-GDLVEAAKKHGVKPIFLVA--PNAD----DERLKQIAE------KSQGFVYLVSRAGVTGARNRAA 183 (256)
T ss_pred CEEEECCCChHHH-HHHHHHHHHCCCcEEEEEC--CCCC----HHHHHHHHH------hCCCCEEEEECCCCCCCcccCC
Confidence 6777776555433 3333336778888665433 2222 344555442 223345554445677864
Q ss_pred ccHHHHHHHHHH-cCCCEEEEec
Q 012991 207 IPVRKLVKICRD-EGVDQVFVDA 228 (452)
Q Consensus 207 ~~l~~i~~l~~~-~~~~~~ivD~ 228 (452)
.++.+..+..++ .+. .+++|+
T Consensus 184 ~~~~~~i~~lr~~~~~-pi~vgf 205 (256)
T TIGR00262 184 SALNELVKRLKAYSAK-PVLVGF 205 (256)
T ss_pred hhHHHHHHHHHhhcCC-CEEEeC
Confidence 234444444444 478 588885
No 454
>PRK10416 signal recognition particle-docking protein FtsY; Provisional
Probab=30.55 E-value=4.9e+02 Score=24.90 Aligned_cols=94 Identities=17% Similarity=0.267 Sum_probs=46.9
Q ss_pred CCCCEEEEeCC-cchh-HHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcc
Q 012991 128 HRNDTVLMLHC-AFQA-VKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCV 205 (452)
Q Consensus 128 ~~g~~Vl~~~~-~~~s-~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~ 205 (452)
..|.+|++.+. .|.+ ....+..++++.++.+...+. ..+......+.+.... ..+..+|++..+....=.
T Consensus 140 ~~g~~V~Li~~D~~r~~a~eql~~~a~~~~i~~~~~~~--~~dpa~~v~~~l~~~~------~~~~D~ViIDTaGr~~~~ 211 (318)
T PRK10416 140 AQGKKVLLAAGDTFRAAAIEQLQVWGERVGVPVIAQKE--GADPASVAFDAIQAAK------ARGIDVLIIDTAGRLHNK 211 (318)
T ss_pred hcCCeEEEEecCccchhhHHHHHHHHHHcCceEEEeCC--CCCHHHHHHHHHHHHH------hCCCCEEEEeCCCCCcCC
Confidence 34556665433 3322 122233336777877665532 1121111245565555 356789999877542211
Q ss_pred ---cccHHHHHHHHH------HcCCCEEEEeccc
Q 012991 206 ---VIPVRKLVKICR------DEGVDQVFVDAAH 230 (452)
Q Consensus 206 ---~~~l~~i~~l~~------~~~~~~~ivD~a~ 230 (452)
+..++.+.++++ .+++ ++++|+..
T Consensus 212 ~~l~~eL~~~~~v~~~~~~~~p~~~-~LVl~a~~ 244 (318)
T PRK10416 212 TNLMEELKKIKRVIKKADPDAPHEV-LLVLDATT 244 (318)
T ss_pred HHHHHHHHHHHHHHhhhcCCCCceE-EEEEECCC
Confidence 123445555553 2356 68899763
No 455
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=30.32 E-value=67 Score=26.00 Aligned_cols=42 Identities=10% Similarity=0.056 Sum_probs=24.9
Q ss_pred HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEe
Q 012991 174 INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVD 227 (452)
Q Consensus 174 ~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD 227 (452)
.+.+++.+ ..++-+|+++... .+.+++.++|++++++++..+
T Consensus 71 ~~~l~~l~------~~~~P~iIvt~~~------~~p~~l~e~a~~~~ipll~t~ 112 (127)
T PF02603_consen 71 KERLEKLF------SYNPPCIIVTRGL------EPPPELIELAEKYNIPLLRTP 112 (127)
T ss_dssp CCHHHHHC------TTT-S-EEEETTT---------HHHHHHHHHCT--EEEES
T ss_pred HHHHHHHh------CCCCCEEEEECcC------CCCHHHHHHHHHhCCcEEEcC
Confidence 45666666 4677788887643 477899999999999544444
No 456
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=30.28 E-value=1.5e+02 Score=24.29 Aligned_cols=53 Identities=21% Similarity=0.213 Sum_probs=38.5
Q ss_pred HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHH-HH----HHHHHHc-CCCEEEEecccc
Q 012991 174 INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVR-KL----VKICRDE-GVDQVFVDAAHA 231 (452)
Q Consensus 174 ~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~-~i----~~l~~~~-~~~~~ivD~a~~ 231 (452)
.+.|.+.+++ .++..|++-.|-++.|..-+.. .+ .++.+++ ++++.++|+..+
T Consensus 40 ~~~l~~li~~-----~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~T 98 (135)
T PF03652_consen 40 IEELKKLIEE-----YQIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLT 98 (135)
T ss_dssp HHHHHHHHHH-----CCECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCS
T ss_pred HHHHHHHHHH-----hCCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChh
Confidence 7888888874 6788999999999999987643 22 3344555 887788998754
No 457
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=30.15 E-value=50 Score=30.37 Aligned_cols=28 Identities=21% Similarity=0.389 Sum_probs=23.3
Q ss_pred cccccHHHHHHHHHHcCCCEEEEeccccc
Q 012991 204 CVVIPVRKLVKICRDEGVDQVFVDAAHAM 232 (452)
Q Consensus 204 G~~~~l~~i~~l~~~~~~~~~ivD~a~~~ 232 (452)
|.+-+.++|.++|+++++ -.+||++|-+
T Consensus 50 G~lg~~~~l~~~l~~~~i-~~vIDATHPf 77 (249)
T PF02571_consen 50 GRLGDEEGLAEFLRENGI-DAVIDATHPF 77 (249)
T ss_pred CCCCCHHHHHHHHHhCCC-cEEEECCCch
Confidence 555588899999999999 6999998854
No 458
>cd06299 PBP1_LacI_like_13 Ligand-binding domain of DNA-binding regulatory protein from Corynebacterium glutamicum which has a unique ability to produce significant amounts of L-glutamate directly from cheap sugar and ammonia. This group includes the ligand-binding domain of DNA-binding regulatory protein from Corynebacterium glutamicum which has a unique ability to produce significant amounts of L-glutamate directly from cheap sugar and ammonia. This regulatory protein is a member of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial trans
Probab=30.11 E-value=3.9e+02 Score=23.96 Aligned_cols=76 Identities=17% Similarity=0.153 Sum_probs=43.2
Q ss_pred CCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHH
Q 012991 137 HCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKIC 216 (452)
Q Consensus 137 ~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~ 216 (452)
++.|......+...++..|..+..+... .+.....+.++..+ ..+.+.|++..... +... .+-+
T Consensus 11 ~~~~~~~~~gi~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~l~------~~~vdgiIi~~~~~------~~~~-~~~l 74 (265)
T cd06299 11 NPYFASLATAIQDAASAAGYSTIIGNSD---ENPETENRYLDNLL------SQRVDGIIVVPHEQ------SAEQ-LEDL 74 (265)
T ss_pred CccHHHHHHHHHHHHHHcCCEEEEEeCC---CCHHHHHHHHHHHH------hcCCCEEEEcCCCC------ChHH-HHHH
Confidence 3445556667777678889988887431 12111244455555 46777777764321 1122 3455
Q ss_pred HHcCCCEEEEec
Q 012991 217 RDEGVDQVFVDA 228 (452)
Q Consensus 217 ~~~~~~~~ivD~ 228 (452)
++.+++.+++|.
T Consensus 75 ~~~~ipvV~~~~ 86 (265)
T cd06299 75 LKRGIPVVFVDR 86 (265)
T ss_pred HhCCCCEEEEec
Confidence 566885566774
No 459
>PTZ00081 enolase; Provisional
Probab=30.02 E-value=4e+02 Score=26.84 Aligned_cols=87 Identities=18% Similarity=0.095 Sum_probs=55.8
Q ss_pred CCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCccc
Q 012991 128 HRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVV 206 (452)
Q Consensus 128 ~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~ 206 (452)
.+-+-+.+.+|-+......|..+..+.|-++..+ . ++.... +..+++.+++ .-...|.+.. |..|.+
T Consensus 295 ~~y~I~~IEDPl~~~D~eg~~~Lt~~lg~~i~Iv----g-DE~~~tn~~~l~~~I~~-----~aad~i~iKv--nqiGGI 362 (439)
T PTZ00081 295 KKYPIVSIEDPFDQDDWEAYAKLTAAIGQKVQIV----G-DDLLVTNPTRIKKAIEK-----KACNALLLKV--NQIGTV 362 (439)
T ss_pred hcCCcEEEEcCCCcccHHHHHHHHHhhCCCceEE----c-CCcccCCHHHHHHHHHh-----CCCCEEEecc--ccccCH
Confidence 4444566778877777788887766665444333 1 221122 6777777752 3345555543 346888
Q ss_pred ccHHHHHHHHHHcCCCEEEEe
Q 012991 207 IPVRKLVKICRDEGVDQVFVD 227 (452)
Q Consensus 207 ~~l~~i~~l~~~~~~~~~ivD 227 (452)
.+..+++++|+++|+ .+++=
T Consensus 363 Te~l~~a~lA~~~Gi-~~iis 382 (439)
T PTZ00081 363 TEAIEAAKLAQKNGW-GVMVS 382 (439)
T ss_pred HHHHHHHHHHHHcCC-cEEEe
Confidence 899999999999998 56664
No 460
>smart00642 Aamy Alpha-amylase domain.
Probab=29.81 E-value=50 Score=28.17 Aligned_cols=30 Identities=20% Similarity=0.331 Sum_probs=25.5
Q ss_pred cCCCCcccccHHHHHHHHHHcCCCEEEEecc
Q 012991 199 ITSMPCVVIPVRKLVKICRDEGVDQVFVDAA 229 (452)
Q Consensus 199 ~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a 229 (452)
+....|...+++++++-||++|+ .+++|-+
T Consensus 62 i~~~~Gt~~d~~~lv~~~h~~Gi-~vilD~V 91 (166)
T smart00642 62 IDPRFGTMEDFKELVDAAHARGI-KVILDVV 91 (166)
T ss_pred CCcccCCHHHHHHHHHHHHHCCC-EEEEEEC
Confidence 34456888899999999999999 8999976
No 461
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=29.49 E-value=3.8e+02 Score=26.44 Aligned_cols=66 Identities=8% Similarity=0.125 Sum_probs=40.8
Q ss_pred HHHHhHhCCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCc-chhHHHHHHHHHHhcCcEEEEE
Q 012991 87 AAVKDLINADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCA-FQAVKKSIQAYVTRAGGSVVEV 161 (452)
Q Consensus 87 ~~la~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~-~~s~~~~~~~~a~~~g~~v~~~ 161 (452)
+.+.++...++.|-|+...+|..++...+.++ +.|..|.+.+=+ -.....-+...++..|.++..+
T Consensus 81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai---------~aGK~VaLANKEslV~aG~~i~~~a~~~g~~i~PV 147 (385)
T PRK05447 81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAI---------RAGKRIALANKESLVCAGELVMDAAKKSGAQILPV 147 (385)
T ss_pred hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHH---------HCCCcEEEeCHHHHHhhHHHHHHHHHHcCCeEEEE
Confidence 34555666655677788888888888888776 778888874332 1111122233356667777655
No 462
>TIGR00160 MGSA methylglyoxal synthase. Methylglyoxal synthase (MGS) generates methylglyoxal (MG), a toxic metabolite (that may also be a regulatory metabolite and) that is detoxified, prinicipally, through a pathway involving glutathione and glyoxylase I. Totemeyer, et al. (MUID:98149311) propose that, during a loss of control over carbon flux, with accumulation of phosphorylated sugars and depletion of phosphate, as might happen during a rapid shift to a richer medium, MGS aids the cell by converting some dihydroxyacetone phosphate (DHAP) to MG and phosphate. This is therefore an alternative to triosephosphate isomerase and the remainder of the glycolytic pathway for the disposal of DHAP during the stress of a sudden increase in available sugars.
Probab=29.47 E-value=2.4e+02 Score=23.41 Aligned_cols=50 Identities=14% Similarity=0.157 Sum_probs=37.2
Q ss_pred HHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecc
Q 012991 175 NEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAA 229 (452)
Q Consensus 175 ~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a 229 (452)
.++-+.|.. ++--.+|+|-.|-++..--.|++.+.++|.-||+ ++-..-+
T Consensus 63 qQIga~Ia~----g~id~vIFf~DPl~~~phepDi~aLlRlc~v~nI-P~AtN~a 112 (143)
T TIGR00160 63 QQIGALIAE----GKIDAVIFFWDPLNAQPHEPDVKALLRLCTVWNI-PLATNVA 112 (143)
T ss_pred HHHHHHHHh----CCCCEEEEecCCCCCCCCCcCHHHHHHHHHhhCc-ccccCHH
Confidence 455555543 3444678898888888888899999999999999 5766543
No 463
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=29.43 E-value=4e+02 Score=23.54 Aligned_cols=93 Identities=14% Similarity=0.159 Sum_probs=51.2
Q ss_pred CcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHH
Q 012991 99 GEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFK 178 (452)
Q Consensus 99 ~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~ 178 (452)
..+++..||..|...+-. | ++.|..|.+.++....- +..+++. | ++.++.-.+ . .+.
T Consensus 10 k~vlVvGgG~va~rk~~~-L--------l~~ga~VtVvsp~~~~~---l~~l~~~-~-~i~~~~~~~--~-----~~d-- 66 (205)
T TIGR01470 10 RAVLVVGGGDVALRKARL-L--------LKAGAQLRVIAEELESE---LTLLAEQ-G-GITWLARCF--D-----ADI-- 66 (205)
T ss_pred CeEEEECcCHHHHHHHHH-H--------HHCCCEEEEEcCCCCHH---HHHHHHc-C-CEEEEeCCC--C-----HHH--
Confidence 477888888888666654 3 36677777766665432 2222333 3 555553110 1 111
Q ss_pred HHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEE-EEecc
Q 012991 179 KGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQV-FVDAA 229 (452)
Q Consensus 179 ~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~-ivD~a 229 (452)
+ ....+|+.+ ||....-..|.+.|++.++ ++ ++|..
T Consensus 67 --l-------~~~~lVi~a-----t~d~~ln~~i~~~a~~~~i-lvn~~d~~ 103 (205)
T TIGR01470 67 --L-------EGAFLVIAA-----TDDEELNRRVAHAARARGV-PVNVVDDP 103 (205)
T ss_pred --h-------CCcEEEEEC-----CCCHHHHHHHHHHHHHcCC-EEEECCCc
Confidence 2 234455543 2333334679999999999 45 35543
No 464
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=29.21 E-value=3.6e+02 Score=24.85 Aligned_cols=78 Identities=14% Similarity=0.208 Sum_probs=44.4
Q ss_pred CCCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCC-hHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccc
Q 012991 129 RNDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLAS-EEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVI 207 (452)
Q Consensus 129 ~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~-~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~ 207 (452)
++..+++..+.| ..++++.|+++..+.. +..+ .-.-+.++.+.++ ..+.++|+.+...+
T Consensus 169 ~~~~~v~~H~af-------~Y~~~~ygl~~~~~~~--~~~eps~~~l~~l~~~ik-----~~~v~~if~e~~~~------ 228 (266)
T cd01018 169 KQRAFMVYHPAW-------GYFARDYGLTQIPIEE--EGKEPSPADLKRLIDLAK-----EKGVRVVFVQPQFS------ 228 (266)
T ss_pred CCCeEEEECchh-------HHHHHHcCCEEEecCC--CCCCCCHHHHHHHHHHHH-----HcCCCEEEEcCCCC------
Confidence 345677755544 3347778999876521 1111 1112566666665 36778888764332
Q ss_pred cHHHHHHHHHHcCCCEEEEe
Q 012991 208 PVRKLVKICRDEGVDQVFVD 227 (452)
Q Consensus 208 ~l~~i~~l~~~~~~~~~ivD 227 (452)
-+.+..++++.|+..+.+|
T Consensus 229 -~~~~~~la~~~g~~v~~ld 247 (266)
T cd01018 229 -TKSAEAIAREIGAKVVTID 247 (266)
T ss_pred -cHHHHHHHHHcCCeEEEeC
Confidence 2445578899998433336
No 465
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=29.11 E-value=1.2e+02 Score=26.74 Aligned_cols=36 Identities=11% Similarity=0.133 Sum_probs=27.1
Q ss_pred CCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEE
Q 012991 188 GKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVF 225 (452)
Q Consensus 188 ~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~i 225 (452)
+-.|..|++.-. +..|...+.+++.+++++|++ +++
T Consensus 150 Gl~p~avi~eil-~~dG~~~~~~~~~~fA~~~~l-~~v 185 (194)
T PF00926_consen 150 GLSPVAVICEIL-DDDGDMARRDELEEFAKKHGL-PIV 185 (194)
T ss_dssp TS-SBEEEEEBB-ETTSSBHCHHHHHHHHHHTT--EEE
T ss_pred CCCCcEEEEEEe-CCCCCcCCHHHHHHHHHHcCC-cEE
Confidence 556766666655 559999999999999999999 554
No 466
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=29.11 E-value=6.4e+02 Score=25.84 Aligned_cols=88 Identities=9% Similarity=0.047 Sum_probs=57.8
Q ss_pred hhhhHHHHHHHHHHHhHh--CCCCCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHh
Q 012991 76 NSLRKGILESRAAVKDLI--NADDVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTR 153 (452)
Q Consensus 76 ~~~~~~~~~~~~~la~~~--~~~~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~ 153 (452)
..+.+..+++++..|-++ |+...|.|.+-..-+..+.+...|.+ ..|-.++-.+|.|.+-...+.. +.
T Consensus 78 ~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A--------~AG~v~v~~NP~Yq~~elr~~L--~k 147 (596)
T KOG1177|consen 78 LTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACA--------RAGLVLVNLNPAYQSEELRYVL--KK 147 (596)
T ss_pred hhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHH--------HhceEEeccCcccccHHHHHHH--hh
Confidence 566788888888888876 45445666554444455555555553 4566666679999987777654 66
Q ss_pred cCcEEEEEeCCCCCCChHHH
Q 012991 154 AGGSVVEVQLPFPLASEEEI 173 (452)
Q Consensus 154 ~g~~v~~~~~~~~~~~~~~~ 173 (452)
.|+++...|..+..++....
T Consensus 148 ~~~k~l~~p~~~k~~ny~~~ 167 (596)
T KOG1177|consen 148 VGCKALFAPPQFKTQNYYET 167 (596)
T ss_pred cCeEEEEccchhhhchHHHH
Confidence 78888888654444444433
No 467
>cd06324 PBP1_ABC_sugar_binding_like_13 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. This group includes the periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=28.99 E-value=3.3e+02 Score=25.42 Aligned_cols=74 Identities=12% Similarity=0.168 Sum_probs=43.0
Q ss_pred chhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCC--ceEEEEEeccCCCCcccccHHHHHHHHH
Q 012991 140 FQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGK--MIRLAIIDHITSMPCVVIPVRKLVKICR 217 (452)
Q Consensus 140 ~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~--~~~lv~~~~~~n~tG~~~~l~~i~~l~~ 217 (452)
|......+...++..|..+...... .+...-.+.++..+ .. +++.|++.... . ..+++.+.++
T Consensus 15 ~~~~~~gi~~~~~~~g~~v~~~~~~---~~~~~~~~~i~~~~------~~~~~vdgiIi~~~~-~-----~~~~~~~~~~ 79 (305)
T cd06324 15 WNSVARFMQAAADDLGIELEVLYAE---RDRFLMLQQARTIL------QRPDKPDALIFTNEK-S-----VAPELLRLAE 79 (305)
T ss_pred HHHHHHHHHHHHHhcCCeEEEEeCC---CCHHHHHHHHHHHH------HhccCCCEEEEcCCc-c-----chHHHHHHHH
Confidence 4445566666677788888776431 12111245555555 35 78888774321 1 2345556777
Q ss_pred HcCCCEEEEec
Q 012991 218 DEGVDQVFVDA 228 (452)
Q Consensus 218 ~~~~~~~ivD~ 228 (452)
+.|++.+++|.
T Consensus 80 ~~giPvV~~~~ 90 (305)
T cd06324 80 GAGVKLFLVNS 90 (305)
T ss_pred hCCCeEEEEec
Confidence 88885566774
No 468
>cd06322 PBP1_ABC_sugar_binding_like_12 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. This group includes the periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consist of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=28.86 E-value=3.1e+02 Score=24.70 Aligned_cols=77 Identities=9% Similarity=0.170 Sum_probs=43.5
Q ss_pred CcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHH
Q 012991 138 CAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICR 217 (452)
Q Consensus 138 ~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~ 217 (452)
+-|..+...+...++..|.++...... .+...-.+.+++.+ ..+++.+++..... ....+..+.++
T Consensus 12 ~~~~~~~~~i~~~~~~~g~~~~i~~~~---~~~~~~~~~~~~~~------~~~vdgiii~~~~~-----~~~~~~~~~~~ 77 (267)
T cd06322 12 PFYIELANAMKEEAKKQKVNLIVSIAN---QDLNKQLSDVEDFI------TKKVDAIVLSPVDS-----KGIRAAIAKAK 77 (267)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEecCC---CCHHHHHHHHHHHH------HcCCCEEEEcCCCh-----hhhHHHHHHHH
Confidence 445555667766677888888766321 12111255566656 45778887753321 12233445567
Q ss_pred HcCCCEEEEec
Q 012991 218 DEGVDQVFVDA 228 (452)
Q Consensus 218 ~~~~~~~ivD~ 228 (452)
+.+++.+.+|.
T Consensus 78 ~~~ipvV~~~~ 88 (267)
T cd06322 78 KAGIPVITVDI 88 (267)
T ss_pred HCCCCEEEEcc
Confidence 77886566773
No 469
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=28.70 E-value=1.9e+02 Score=23.50 Aligned_cols=53 Identities=11% Similarity=0.057 Sum_probs=38.8
Q ss_pred HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHH-----HHHHHHHcCCCEEEEecccc
Q 012991 174 INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRK-----LVKICRDEGVDQVFVDAAHA 231 (452)
Q Consensus 174 ~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~-----i~~l~~~~~~~~~ivD~a~~ 231 (452)
.+.|.+.+++ .++..|++-.|-++.|..-+... ..+|.+++++++.++|+-.+
T Consensus 37 ~~~l~~~i~~-----~~~~~iVvGlP~~~dG~~~~~a~~v~~f~~~L~~~~~~~v~~~DEr~T 94 (130)
T TIGR00250 37 WSRIEELLKE-----WTPDKIVVGLPLNMDGTEGPLTERAQKFANRLEGRFGVPVVLWDERLS 94 (130)
T ss_pred HHHHHHHHHH-----cCCCEEEEeccCCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcC
Confidence 6778887763 56788999999999999877432 23345566887789998754
No 470
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=28.53 E-value=2.4e+02 Score=25.33 Aligned_cols=32 Identities=22% Similarity=0.211 Sum_probs=16.7
Q ss_pred ceEEEEEeccCCCCccc--c-c-------HHHHHHHHHHcCC
Q 012991 190 MIRLAIIDHITSMPCVV--I-P-------VRKLVKICRDEGV 221 (452)
Q Consensus 190 ~~~lv~~~~~~n~tG~~--~-~-------l~~i~~l~~~~~~ 221 (452)
++++|++.+.+...... . . +..|.++|+++|+
T Consensus 123 ~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~ 164 (242)
T cd00984 123 GLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNV 164 (242)
T ss_pred CCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCC
Confidence 56677777665431110 0 1 2345666667776
No 471
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=28.21 E-value=1.1e+02 Score=26.08 Aligned_cols=50 Identities=14% Similarity=0.302 Sum_probs=37.1
Q ss_pred HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcC--CCEEEEecccccCCc
Q 012991 174 INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEG--VDQVFVDAAHAMGSI 235 (452)
Q Consensus 174 ~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~--~~~~ivD~a~~~g~~ 235 (452)
..++++++ ...+..+++= +|.+..++++.+..+..| + ++|+|-..++...
T Consensus 13 ~~~le~~l------es~~~~vflL-----~~~i~~ik~ivk~lK~~gK~v-fiHvDLv~Gl~~~ 64 (181)
T COG1954 13 NKDLEKAL------ESESQYVFLL-----TGHILNIKEIVKKLKNRGKTV-FIHVDLVEGLSND 64 (181)
T ss_pred HHHHHHHh------cCCCeEEEEE-----echhhhHHHHHHHHHhCCcEE-EEEeHHhcccCCc
Confidence 47788888 4556665552 477899999999999876 6 7888877776543
No 472
>PRK08506 replicative DNA helicase; Provisional
Probab=28.08 E-value=1.5e+02 Score=30.09 Aligned_cols=8 Identities=13% Similarity=0.310 Sum_probs=4.6
Q ss_pred CCEEEEec
Q 012991 221 VDQVFVDA 228 (452)
Q Consensus 221 ~~~~ivD~ 228 (452)
+.+++||=
T Consensus 303 ~~lvvIDy 310 (472)
T PRK08506 303 IGLAVIDY 310 (472)
T ss_pred CCEEEEcC
Confidence 33567773
No 473
>cd06296 PBP1_CatR_like Ligand-binding domain of a LacI-like transcriptional regulator, CatR which is involved in catechol degradation. This group includes the ligand-binding domain of a LacI-like transcriptional regulator, CatR which is involved in catechol degradation. This group belongs to the the LacI-GalR family repressors that are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=28.05 E-value=4.3e+02 Score=23.71 Aligned_cols=74 Identities=15% Similarity=0.035 Sum_probs=42.1
Q ss_pred CcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHH
Q 012991 138 CAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKIC 216 (452)
Q Consensus 138 ~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~ 216 (452)
+-|......+...++..|.++..... +.+..- .+.++..+ ..+.+.+++..+.. . ....+.+
T Consensus 12 ~~~~~~~~gi~~~~~~~g~~~~~~~~----~~~~~~~~~~i~~l~------~~~~dgiii~~~~~-~------~~~~~~~ 74 (270)
T cd06296 12 PWASEVLRGVEEAAAAAGYDVVLSES----GRRTSPERQWVERLS------ARRTDGVILVTPEL-T------SAQRAAL 74 (270)
T ss_pred ccHHHHHHHHHHHHHHcCCeEEEecC----CCchHHHHHHHHHHH------HcCCCEEEEecCCC-C------hHHHHHH
Confidence 33445556666667888988887742 222222 44455555 45677777754432 1 1234556
Q ss_pred HHcCCCEEEEec
Q 012991 217 RDEGVDQVFVDA 228 (452)
Q Consensus 217 ~~~~~~~~ivD~ 228 (452)
++.+++.+.+|-
T Consensus 75 ~~~~ipvV~i~~ 86 (270)
T cd06296 75 RRTGIPFVVVDP 86 (270)
T ss_pred hcCCCCEEEEec
Confidence 777886566674
No 474
>PLN02672 methionine S-methyltransferase
Probab=28.00 E-value=3.4e+02 Score=30.89 Aligned_cols=133 Identities=11% Similarity=0.121 Sum_probs=72.2
Q ss_pred hhhhhhHHHHHHHHHHHhHhC----CC-CCCcEEEecChhHHHHHHHHHhhcccccCCCCCC----CEEEEeCCcchhHH
Q 012991 74 YFNSLRKGILESRAAVKDLIN----AD-DVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRN----DTVLMLHCAFQAVK 144 (452)
Q Consensus 74 ~~~~~~~~~~~~~~~la~~~~----~~-~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g----~~Vl~~~~~~~s~~ 144 (452)
+++.+..+-...|+.|+.++. ++ .+++|++.++-..|++.+++.+ .|. |+-++ ..-+....
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~-~~~~~~~~ 489 (1082)
T PLN02672 420 FPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLF---------SPRLAIVDEHLT-RWLPKKWL 489 (1082)
T ss_pred CCCCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhh---------ChHHHhhhhhhh-ccCCHHHH
Confidence 456666777788888887764 33 3689999999999998887744 222 11111 11111111
Q ss_pred HHHHHH----HHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcC
Q 012991 145 KSIQAY----VTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEG 220 (452)
Q Consensus 145 ~~~~~~----a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~ 220 (452)
.++..- ....+..+..+.- |... +.+.+.+++ -++++|+..-...-.-+.--++.|.+.+++.|
T Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (1082)
T PLN02672 490 TSLAIENATSDSKSDDVITVIEA--PRQS-----DLVIELIKK-----LKPQVVVTGMADFEMRTSTAFEHLLNVTAEIG 557 (1082)
T ss_pred hHhhhhcccccCccCCeEEEEeC--CCcc-----hHHHHHHHh-----CCCeEEEEeccchhhhhHHHHHHHHHHHHhhC
Confidence 111110 0112234444432 2222 344445542 46777766443321111223677889999999
Q ss_pred CCEEEEecc
Q 012991 221 VDQVFVDAA 229 (452)
Q Consensus 221 ~~~~ivD~a 229 (452)
. .++.|..
T Consensus 558 ~-~~~~~~~ 565 (1082)
T PLN02672 558 A-RLFLDIS 565 (1082)
T ss_pred c-EEEEehh
Confidence 9 6999954
No 475
>TIGR02012 tigrfam_recA protein RecA. This model describes orthologs of the recA protein. RecA promotes hybridization of homolgous regions of DNA. A segment of ssDNA can be hybridized to another ssDNA region, or to a dsDNA region. ATP is hydrolyzed in the process. Part of the SOS respones, it is regulated by LexA via autocatalytic cleavage.
Probab=27.78 E-value=3.1e+02 Score=26.28 Aligned_cols=16 Identities=0% Similarity=-0.228 Sum_probs=8.9
Q ss_pred HHHHHHHhhhcceEeee
Q 012991 374 LRLRGHLRVRFGVEVPI 390 (452)
Q Consensus 374 ~~l~~~L~~~~gI~v~~ 390 (452)
..+.+...+ +||.-..
T Consensus 268 ~~~~~~a~~-~g~i~k~ 283 (321)
T TIGR02012 268 GEIIDLAVE-LDIIKKA 283 (321)
T ss_pred hHHHHHHHh-CCcEEcc
Confidence 455555544 5777643
No 476
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=27.66 E-value=4.4e+02 Score=23.47 Aligned_cols=35 Identities=11% Similarity=0.108 Sum_probs=26.2
Q ss_pred CCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcch
Q 012991 98 VGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQ 141 (452)
Q Consensus 98 ~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~ 141 (452)
...+++..||+.|..-+=. +++.|.+|.+..++..
T Consensus 12 ~k~VlvvGgG~va~rKa~~---------ll~~ga~v~Vvs~~~~ 46 (210)
T COG1648 12 GKKVLVVGGGSVALRKARL---------LLKAGADVTVVSPEFE 46 (210)
T ss_pred CCEEEEECCCHHHHHHHHH---------HHhcCCEEEEEcCCcc
Confidence 3578888999888776655 2478888888877773
No 477
>cd06297 PBP1_LacI_like_12 Ligand-binding domain of uncharacterized transcription regulators from Thermus thermophilus and close homologs. Ligand-binding domain of uncharacterized transcription regulators from Thermus thermophilus and close homologs from other bacteria. This group belongs to the the LacI-GalR family repressors that are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding.
Probab=27.40 E-value=4.1e+02 Score=24.05 Aligned_cols=74 Identities=11% Similarity=0.077 Sum_probs=41.5
Q ss_pred cchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHH
Q 012991 139 AFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRD 218 (452)
Q Consensus 139 ~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~ 218 (452)
-|......+...+...|..+...... ......+.++..+. ..++..|++.... + + .++.+.+++
T Consensus 13 ~~~~~~~~i~~~~~~~gy~~~~~~~~----~~~~~~~~~~~~l~-----~~~vdgvi~~~~~-~-----~-~~~~~~l~~ 76 (269)
T cd06297 13 FYRRLLEGIEGALLEQRYDLALFPLL----SLARLKRYLESTTL-----AYLTDGLLLASYD-L-----T-ERLAERRLP 76 (269)
T ss_pred hHHHHHHHHHHHHHHCCCEEEEEeCC----CcHHHHHHHHHHHH-----hcCCCEEEEecCc-c-----C-hHHHHHHhh
Confidence 34445566666677889888887542 22222344544332 3567777776422 1 1 234455667
Q ss_pred cCCCEEEEec
Q 012991 219 EGVDQVFVDA 228 (452)
Q Consensus 219 ~~~~~~ivD~ 228 (452)
.|+|.+++|.
T Consensus 77 ~~iPvv~~~~ 86 (269)
T cd06297 77 TERPVVLVDA 86 (269)
T ss_pred cCCCEEEEcc
Confidence 7886556664
No 478
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=27.33 E-value=4.3e+02 Score=24.70 Aligned_cols=79 Identities=14% Similarity=0.123 Sum_probs=42.5
Q ss_pred CCEEEEeCCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCC-hHHHHHHHHHHHhccccCCCceEEEEEeccCCCCccccc
Q 012991 130 NDTVLMLHCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLAS-EEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIP 208 (452)
Q Consensus 130 g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~-~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~ 208 (452)
+..+++..+.| ..+++++|.++..+--..+..+ ...-+..+.+.++ ..+.++|+..... +
T Consensus 179 ~~~~v~~H~af-------~Yl~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik-----~~~v~~If~e~~~-------~ 239 (286)
T cd01019 179 TKPFFVFHDAY-------GYFEKRYGLTQAGVFTIDPEIDPGAKRLAKIRKEIK-----EKGATCVFAEPQF-------H 239 (286)
T ss_pred CCeEEEecccH-------HHHHHHcCCceeeeecCCCCCCCCHHHHHHHHHHHH-----HcCCcEEEecCCC-------C
Confidence 45666655544 3447778998765421101111 1111455555555 4677888775443 3
Q ss_pred HHHHHHHHHHcCCCEEEEe
Q 012991 209 VRKLVKICRDEGVDQVFVD 227 (452)
Q Consensus 209 l~~i~~l~~~~~~~~~ivD 227 (452)
-+.+..|+++.|+..+.+|
T Consensus 240 ~~~~~~ia~~~g~~v~~l~ 258 (286)
T cd01019 240 PKIAETLAEGTGAKVGELD 258 (286)
T ss_pred hHHHHHHHHhcCceEEEec
Confidence 3556677888887323346
No 479
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=27.24 E-value=62 Score=30.20 Aligned_cols=34 Identities=15% Similarity=0.239 Sum_probs=28.2
Q ss_pred EeccCCCCcccccHHHHHHHHHHcCCCEEEEeccc
Q 012991 196 IDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAH 230 (452)
Q Consensus 196 ~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~ 230 (452)
+..+....|...+++++++.||++|+ -||+|-+.
T Consensus 41 ~~~vd~~~Gt~~d~~~Lv~~~h~~gi-~VilD~V~ 74 (316)
T PF00128_consen 41 YYAVDPRFGTMEDFKELVDAAHKRGI-KVILDVVP 74 (316)
T ss_dssp EEEESTTTBHHHHHHHHHHHHHHTTC-EEEEEEET
T ss_pred eeccccccchhhhhhhhhhccccccc-eEEEeeec
Confidence 33355567999999999999999999 89999763
No 480
>cd01540 PBP1_arabinose_binding Periplasmic L-arabinose-binding protein (ABP), a member of a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily. Periplasmic L-arabinose-binding protein (ABP), a member of a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily. ABP is only involved in transport contrary to other related sugar-binding proteins such as the glucose/galactose-binding protein (GGBP) and the ribose-binding protein (RBP), both of which are involved in chemotaxis as well as transport. The periplasmic ABP consists of two alpha/beta globular domains connected by a three-stranded hinge, a Venus flytrap-like domain, which undergoes a transition from an open to a closed conformational state upon ligand binding. Moreover, ABP is homologous to the ligand-binding domain of eukaryotic receptors such as metabotropic glutamate receptor (mGluR) and DNA-binding transcriptional repressors such a
Probab=27.22 E-value=3.6e+02 Score=24.63 Aligned_cols=76 Identities=16% Similarity=0.070 Sum_probs=43.9
Q ss_pred CcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHH
Q 012991 138 CAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICR 217 (452)
Q Consensus 138 ~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~ 217 (452)
+-|.....++...++..|..+..... ++.....+.++..+ ..+++.|++..... ...+.+.+.++
T Consensus 12 ~~~~~~~~gi~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~------~~~~dgiii~~~~~-----~~~~~~~~~~~ 76 (289)
T cd01540 12 PWFQTEWKFAKKAAKEKGFTVVKIDV----PDGEKVLSAIDNLG------AQGAKGFVICVPDV-----KLGPAIVAKAK 76 (289)
T ss_pred cHHHHHHHHHHHHHHHcCCEEEEccC----CCHHHHHHHHHHHH------HcCCCEEEEccCch-----hhhHHHHHHHH
Confidence 33555556666667888988877632 22222245555555 45677777754321 11345567788
Q ss_pred HcCCCEEEEec
Q 012991 218 DEGVDQVFVDA 228 (452)
Q Consensus 218 ~~~~~~~ivD~ 228 (452)
+++++++.+|.
T Consensus 77 ~~~iPvV~~~~ 87 (289)
T cd01540 77 AYNMKVVAVDD 87 (289)
T ss_pred hCCCeEEEecC
Confidence 89985445653
No 481
>PF13941 MutL: MutL protein
Probab=27.10 E-value=2.2e+02 Score=28.84 Aligned_cols=86 Identities=10% Similarity=0.088 Sum_probs=44.5
Q ss_pred HHHHHHHHHhHhCCC---CCCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHHHhcCcEE
Q 012991 82 ILESRAAVKDLINAD---DVGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYVTRAGGSV 158 (452)
Q Consensus 82 ~~~~~~~la~~~~~~---~~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a~~~g~~v 158 (452)
+.++.+.+.+..+.. +.+.++.|+|+..++.+++.++ .+.-...+.+..|-..|.++
T Consensus 45 ~~~A~~~l~~~~~~~~~~~~~~~la~SSAaGGLrmvv~Gl--------------------v~~~Ta~AAk~AAlgAGA~V 104 (457)
T PF13941_consen 45 LNNALEQLEEQTPASPDDGYDKVLACSSAAGGLRMVVIGL--------------------VPDLTAEAAKRAALGAGARV 104 (457)
T ss_pred HHHHHHHHHHhcCCCcccCceEEEEECCCCCcceEEEEec--------------------CHHHHHHHHHHHHhcCCcEE
Confidence 444555555555542 2357777777765554444433 22223455555555567766
Q ss_pred EEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccC
Q 012991 159 VEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHIT 200 (452)
Q Consensus 159 ~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~ 200 (452)
..+-.. .+ -.++++.. .-+|.+|+++...
T Consensus 105 ~~v~s~-------~l~~~~l~~i~------~~~PDiILLaGGt 134 (457)
T PF13941_consen 105 LQVYSY-------ELTEEDLEEIR------EIRPDIILLAGGT 134 (457)
T ss_pred EEEecc-------CCCHHHHHHHh------ccCCCEEEEeCCc
Confidence 665211 11 34444433 4566777766543
No 482
>TIGR00486 YbgI_SA1388 dinuclear metal center protein, YbgI/SA1388 family. The characterization of this family of uncharacterized proteins as orthologous is tentative. Members are found in all three domains of life. Several members (from Bacillus subtilis, Listeria monocytogenes, and Mycobacterium tuberculosis - all classified as Firmicutes within the Eubacteria) share a long insert relative to other members.
Probab=26.89 E-value=4.9e+02 Score=23.77 Aligned_cols=83 Identities=12% Similarity=0.227 Sum_probs=49.0
Q ss_pred HHHHHHHHHhHhCCCC----------CCcEEEecChhHHHHHHHHHhhcccccCCCCCCCEEEEeCCcchhHHHHHHHHH
Q 012991 82 ILESRAAVKDLINADD----------VGEISLVDNATTAAAIVLQQIGRGFTEGRFHRNDTVLMLHCAFQAVKKSIQAYV 151 (452)
Q Consensus 82 ~~~~~~~la~~~~~~~----------~~~i~~t~g~t~a~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~~s~~~~~~~~a 151 (452)
.+++.+.+++.++.+. ...|.+.+|+... .+-.++ ...-|.+++.+..|+.... |
T Consensus 141 ~~~~~~~vk~~l~~~~vr~~~~~~~~i~rVAi~~GsG~~--~~~~a~--------~~gaD~~ITGd~k~h~~~~-----A 205 (249)
T TIGR00486 141 SLEEVLEIKKVLNVKPLLVVKNGPEYVKKVAVVSGSGLS--FIMKAL--------REGVDAYITGDLSHHTAHL-----A 205 (249)
T ss_pred HHHHHHHHHHHhCCCCEEEeCCCCCceeEEEEEcCchHH--HHHHHH--------HcCCCEEEecCCchHHHHH-----H
Confidence 4666777777776431 2256666665433 222222 1233788888998876433 3
Q ss_pred HhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhc
Q 012991 152 TRAGGSVVEVQLPFPLASEEEI-INEFKKGIEK 183 (452)
Q Consensus 152 ~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~ 183 (452)
...|..+..+ .+...+.+ .+.|.+.+++
T Consensus 206 ~~~gi~li~~----gH~~sE~~~~~~la~~L~~ 234 (249)
T TIGR00486 206 RELGLNVIDA----GHYATERGGLRKLMEDLNE 234 (249)
T ss_pred HHCCCEEEEc----CcHHHHHHHHHHHHHHHHH
Confidence 4458777766 55445555 7788888864
No 483
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=26.78 E-value=65 Score=33.82 Aligned_cols=39 Identities=18% Similarity=0.047 Sum_probs=32.6
Q ss_pred EEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEecccc
Q 012991 192 RLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDAAHA 231 (452)
Q Consensus 192 ~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~a~~ 231 (452)
..+..-++++..|...+++.+++-||+.|+ -||+|-+++
T Consensus 199 q~~g~yAp~sryGtPedfk~fVD~aH~~GI-gViLD~V~~ 237 (628)
T COG0296 199 QGTGYYAPTSRYGTPEDFKALVDAAHQAGI-GVILDWVPN 237 (628)
T ss_pred CcceeccccccCCCHHHHHHHHHHHHHcCC-EEEEEecCC
Confidence 345555578889999999999999999999 899997654
No 484
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=26.67 E-value=2.8e+02 Score=20.91 Aligned_cols=69 Identities=14% Similarity=0.193 Sum_probs=39.4
Q ss_pred HHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEE
Q 012991 146 SIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVF 225 (452)
Q Consensus 146 ~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~i 225 (452)
.+....+..|.+..... +......-...|++.+ .++++|++..-.... .-...+.+.|+++++++++
T Consensus 14 ~~~~~~~~~G~~~~~hg---~~~~~~~~~~~l~~~i-------~~aD~VIv~t~~vsH---~~~~~vk~~akk~~ip~~~ 80 (97)
T PF10087_consen 14 RYKRILEKYGGKLIHHG---RDGGDEKKASRLPSKI-------KKADLVIVFTDYVSH---NAMWKVKKAAKKYGIPIIY 80 (97)
T ss_pred HHHHHHHHcCCEEEEEe---cCCCCccchhHHHHhc-------CCCCEEEEEeCCcCh---HHHHHHHHHHHHcCCcEEE
Confidence 34444677899888871 1111111133467666 566777665333222 2356778899999995444
Q ss_pred Ee
Q 012991 226 VD 227 (452)
Q Consensus 226 vD 227 (452)
+.
T Consensus 81 ~~ 82 (97)
T PF10087_consen 81 SR 82 (97)
T ss_pred EC
Confidence 44
No 485
>cd01539 PBP1_GGBP Periplasmic glucose/galactose-binding protein (GGBP) involved in chemotaxis towards, and active transport of, glucose and galactose in various bacterial species. Periplasmic glucose/galactose-binding protein (GGBP) involved in chemotaxis towards, and active transport of, glucose and galactose in various bacterial species. GGBP is a member of the pentose/hexose sugar-binding protein family of the type I periplasmic binding protein superfamily which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. Moreover, the periplasmic GGBP is homologous to the ligand-binding domain of eukaryotic receptors such as glutamate receptor (GluR) and DNA-binding transcriptional repressors such as LacI and GalR.
Probab=26.66 E-value=4.5e+02 Score=24.49 Aligned_cols=75 Identities=7% Similarity=0.186 Sum_probs=42.6
Q ss_pred cchhHHHHHHHHHHh--cCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHH
Q 012991 139 AFQAVKKSIQAYVTR--AGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKI 215 (452)
Q Consensus 139 ~~~s~~~~~~~~a~~--~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l 215 (452)
-|......+...++. .|..+...+. ..+... .+.++..+ ..+++.|++.... + ..+....+.
T Consensus 13 ~~~~~~~gi~~~a~~~~~g~~~~~~~~----~~~~~~q~~~i~~l~------~~~vdgiii~~~~-~----~~~~~~~~~ 77 (303)
T cd01539 13 FISLVRKNLEDIQKENGGKVEFTFYDA----KNNQSTQNEQIDTAL------AKGVDLLAVNLVD-P----TAAQTVINK 77 (303)
T ss_pred HHHHHHHHHHHHHHhhCCCeeEEEecC----CCCHHHHHHHHHHHH------HcCCCEEEEecCc-h----hhHHHHHHH
Confidence 344455667666777 6777776632 222222 45566666 4678777775322 1 113445556
Q ss_pred HHHcCCCEEEEec
Q 012991 216 CRDEGVDQVFVDA 228 (452)
Q Consensus 216 ~~~~~~~~~ivD~ 228 (452)
+++.|++++++|.
T Consensus 78 ~~~~giPvV~~~~ 90 (303)
T cd01539 78 AKQKNIPVIFFNR 90 (303)
T ss_pred HHHCCCCEEEeCC
Confidence 6777886556664
No 486
>PF03796 DnaB_C: DnaB-like helicase C terminal domain; InterPro: IPR007694 The hexameric helicase DnaB unwinds the DNA duplex at the Escherichia coli chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis. ; GO: 0003678 DNA helicase activity, 0005524 ATP binding, 0006260 DNA replication; PDB: 1Q57_E 1E0K_D 1E0J_B 1CR2_A 1CR4_A 1CR1_A 1CR0_A 1MI8_A 2R6D_B 2R6C_C ....
Probab=26.59 E-value=1.3e+02 Score=27.63 Aligned_cols=52 Identities=19% Similarity=0.363 Sum_probs=28.9
Q ss_pred HHHHHHHHhccccCCCceEEEEEeccCCCCccc--c----c----HHHHHHHHHHcCCCEEEE
Q 012991 174 INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVV--I----P----VRKLVKICRDEGVDQVFV 226 (452)
Q Consensus 174 ~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~--~----~----l~~i~~l~~~~~~~~~iv 226 (452)
++++++.++.......++++|++.+.+-..... . . .+++.++|+++++ ++++
T Consensus 114 ~~~i~~~i~~~~~~~~~~~~v~IDyl~ll~~~~~~~~~~~~~~~i~~~Lk~lA~~~~i-~vi~ 175 (259)
T PF03796_consen 114 IDDIESKIRRLKREGKKVDVVFIDYLQLLKSEDSSDNRRQEIGEISRELKALAKELNI-PVIA 175 (259)
T ss_dssp HHHHHHHHHHHHHHSTTEEEEEEEEGGGSBTSCSSSCCHHHHHHHHHHHHHHHHHHTS-EEEE
T ss_pred HHHHHHHHHHHHhhccCCCEEEechHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHcCC-eEEE
Confidence 444444444332223567788888776543321 1 1 2356777888888 5665
No 487
>KOG1546 consensus Metacaspase involved in regulation of apoptosis [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=26.46 E-value=3e+02 Score=26.27 Aligned_cols=56 Identities=5% Similarity=0.097 Sum_probs=28.9
Q ss_pred HHHHHHHHHhHhCCCCCCcEEEecChhHH------HHHHHHHhhcccccCCCCCCCEEEEeCCcc
Q 012991 82 ILESRAAVKDLINADDVGEISLVDNATTA------AAIVLQQIGRGFTEGRFHRNDTVLMLHCAF 140 (452)
Q Consensus 82 ~~~~~~~la~~~~~~~~~~i~~t~g~t~a------~~~~~~~l~~~~~~~~~~~g~~Vl~~~~~~ 140 (452)
....++.|-+.||.+ .+.|++..-..+. =..+..|+.|-.. ..++||.+++--..|
T Consensus 87 v~~M~~~Lv~rfGFs-~ddI~~LtDt~~s~~~~PT~~Nir~Al~wLV~--~aq~gD~LvfHYSGH 148 (362)
T KOG1546|consen 87 VHRMRKLLVERFGFS-EDDILMLTDTDESPVRIPTGKNIRRALRWLVE--SAQPGDSLVFHYSGH 148 (362)
T ss_pred HHHHHHHHHHhhCCC-hhheEEEecCCCcccccCcHHHHHHHHHHHHh--cCCCCCEEEEEecCC
Confidence 455677788889987 5666543211110 0122233333221 347888888733333
No 488
>cd06312 PBP1_ABC_sugar_binding_like_4 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=26.38 E-value=3.9e+02 Score=24.18 Aligned_cols=78 Identities=10% Similarity=0.026 Sum_probs=43.3
Q ss_pred CcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHH
Q 012991 138 CAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICR 217 (452)
Q Consensus 138 ~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~ 217 (452)
+-|......+...++..|..+....... .+.....+.++..+ ..+.+.+++..... ..+....+.++
T Consensus 13 ~~~~~~~~g~~~~~~~~g~~v~~~~~~~--~~~~~~~~~i~~l~------~~~vdgiii~~~~~-----~~~~~~l~~~~ 79 (271)
T cd06312 13 PFWTVVKNGAEDAAKDLGVDVEYRGPET--FDVADMARLIEAAI------AAKPDGIVVTIPDP-----DALDPAIKRAV 79 (271)
T ss_pred cHHHHHHHHHHHHHHHhCCEEEEECCCC--CCHHHHHHHHHHHH------HhCCCEEEEeCCCh-----HHhHHHHHHHH
Confidence 3344555667776788898888774311 02122245555555 35677777754321 11234446667
Q ss_pred HcCCCEEEEec
Q 012991 218 DEGVDQVFVDA 228 (452)
Q Consensus 218 ~~~~~~~ivD~ 228 (452)
+.|++++.+|.
T Consensus 80 ~~~ipvV~~~~ 90 (271)
T cd06312 80 AAGIPVISFNA 90 (271)
T ss_pred HCCCeEEEeCC
Confidence 78885566664
No 489
>cd01538 PBP1_ABC_xylose_binding Periplasmic xylose-binding component of the ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily. Periplasmic xylose-binding component of the ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes a transition from an open to a closed conformational state upon ligand binding. Moreover, the periplasmic xylose-binding protein is homologous to the ligand-binding domain of eukaryotic receptors such as glutamate receptor (GluR) and DNA-binding transcriptional repressors such as LacI and GalR.
Probab=26.38 E-value=5.1e+02 Score=23.77 Aligned_cols=76 Identities=14% Similarity=0.207 Sum_probs=43.6
Q ss_pred CcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHH
Q 012991 138 CAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKIC 216 (452)
Q Consensus 138 ~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~ 216 (452)
+-|......+...++..|..+..... ..+..- .+.++..+ ..+++.|++.... . ....++.+.+
T Consensus 12 ~~~~~~~~gi~~~a~~~g~~~~~~~~----~~~~~~~~~~i~~~~------~~~vdgiii~~~~-~----~~~~~~l~~l 76 (288)
T cd01538 12 ERWIRDRPNFEAALKELGAEVIVQNA----NGDPAKQISQIENMI------AKGVDVLVIAPVD-G----EALASAVEKA 76 (288)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEECC----CCCHHHHHHHHHHHH------HcCCCEEEEecCC-h----hhHHHHHHHH
Confidence 34555666777767888999888743 222222 45555555 4578777775421 1 1123444556
Q ss_pred HHcCCCEEEEec
Q 012991 217 RDEGVDQVFVDA 228 (452)
Q Consensus 217 ~~~~~~~~ivD~ 228 (452)
++.+++.+.+|.
T Consensus 77 ~~~~ipvV~~~~ 88 (288)
T cd01538 77 ADAGIPVIAYDR 88 (288)
T ss_pred HHCCCCEEEECC
Confidence 667885556664
No 490
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=26.29 E-value=2e+02 Score=27.57 Aligned_cols=76 Identities=16% Similarity=0.167 Sum_probs=46.3
Q ss_pred CCceEEEEEeccCCCCcccccHHHHHH----HHHHcCCCEEEEecccccCCccccccccCccEEEEcCcccCcCCCCcEE
Q 012991 188 GKMIRLAIIDHITSMPCVVIPVRKLVK----ICRDEGVDQVFVDAAHAMGSIKIDVKEIGADFYVSNLHKWFFCPPSVAF 263 (452)
Q Consensus 188 ~~~~~lv~~~~~~n~tG~~~~l~~i~~----l~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~g~~G~G~ 263 (452)
.++.+.|++- .++|-|.+..-+.|.+ +.++..+ .+++++..+.|..-+.. .+|=++.+.+= +-|+ +|.
T Consensus 95 ~~~vk~vvL~-inSPGG~v~as~~i~~~l~~l~~~~PV-~v~v~~~AASGGY~IA~---aAd~I~a~p~s-i~GS--IGV 166 (317)
T COG0616 95 DPSVKAVVLR-INSPGGSVVASELIARALKRLRAKKPV-VVSVGGYAASGGYYIAL---AADKIVADPSS-ITGS--IGV 166 (317)
T ss_pred CCCCceEEEE-EECcCCchhHHHHHHHHHHHHhhcCCE-EEEECCeecchhhhhhc---cCCEEEecCCc-eeee--cee
Confidence 4556666554 6778899887665544 4444457 68888766665543333 46777777666 4555 455
Q ss_pred EEEecCcc
Q 012991 264 LYCRKSIL 271 (452)
Q Consensus 264 l~~~~~~~ 271 (452)
+...+++.
T Consensus 167 i~~~~~~~ 174 (317)
T COG0616 167 ISGAPNFE 174 (317)
T ss_pred EEecCCHH
Confidence 65544443
No 491
>cd06273 PBP1_GntR_like_1 This group includes the ligand-binding domain of putative DNA transcription repressors which are highly similar to that of the repressor specific for gluconate (GntR), a member of the LacI-GalR family of bacterial transcription regulators. This group includes the ligand-binding domain of putative DNA transcription repressors which are highly similar to that of the repressor specific for gluconate (GntR), a member of the LacI-GalR family of bacterial transcription regulators. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational
Probab=26.25 E-value=4.8e+02 Score=23.39 Aligned_cols=74 Identities=12% Similarity=0.104 Sum_probs=40.5
Q ss_pred CcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHH-HHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHH
Q 012991 138 CAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEI-INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKIC 216 (452)
Q Consensus 138 ~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~ 216 (452)
+-|......+...++..|..+.... .+.+... .+.++..+ ..+...+++..... + +...+.+
T Consensus 12 ~~~~~~~~~i~~~~~~~g~~~~~~~----~~~~~~~~~~~~~~l~------~~~vdgiii~~~~~------~-~~~~~~l 74 (268)
T cd06273 12 AIFARVIQAFQETLAAHGYTLLVAS----SGYDLDREYAQARKLL------ERGVDGLALIGLDH------S-PALLDLL 74 (268)
T ss_pred chHHHHHHHHHHHHHHCCCEEEEec----CCCCHHHHHHHHHHHH------hcCCCEEEEeCCCC------C-HHHHHHH
Confidence 3344455666666777898887763 2222222 44455555 34566666543221 1 3444567
Q ss_pred HHcCCCEEEEec
Q 012991 217 RDEGVDQVFVDA 228 (452)
Q Consensus 217 ~~~~~~~~ivD~ 228 (452)
++.+++.+++|.
T Consensus 75 ~~~~iPvv~~~~ 86 (268)
T cd06273 75 ARRGVPYVATWN 86 (268)
T ss_pred HhCCCCEEEEcC
Confidence 778886556664
No 492
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=26.19 E-value=1.8e+02 Score=26.93 Aligned_cols=28 Identities=18% Similarity=0.415 Sum_probs=23.6
Q ss_pred cccHHHHHHHHHHcCCCEEEEecccccCC
Q 012991 206 VIPVRKLVKICRDEGVDQVFVDAAHAMGS 234 (452)
Q Consensus 206 ~~~l~~i~~l~~~~~~~~~ivD~a~~~g~ 234 (452)
..++..|..+.+.+++ ++++|..|+.|.
T Consensus 180 ~~dl~~i~~lk~~~~~-pV~~ds~Hs~G~ 207 (260)
T TIGR01361 180 TLDLSAVPVLKKETHL-PIIVDPSHAAGR 207 (260)
T ss_pred CcCHHHHHHHHHhhCC-CEEEcCCCCCCc
Confidence 3578899888888899 699999998774
No 493
>cd06313 PBP1_ABC_sugar_binding_like_5 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=26.17 E-value=3.7e+02 Score=24.47 Aligned_cols=78 Identities=8% Similarity=-0.000 Sum_probs=44.8
Q ss_pred CCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHH
Q 012991 137 HCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKIC 216 (452)
Q Consensus 137 ~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~ 216 (452)
++-|......+...++..|..+...... .+.....+.++..+ ..++..|++.... + + ...++.+-+
T Consensus 11 ~~f~~~~~~gi~~~~~~~G~~~~~~~~~---~d~~~~~~~i~~~~------~~~vdgiii~~~~-~-~---~~~~~i~~~ 76 (272)
T cd06313 11 ATWCAQGKQAADEAGKLLGVDVTWYGGA---LDAVKQVAAIENMA------SQGWDFIAVDPLG-I-G---TLTEAVQKA 76 (272)
T ss_pred ChHHHHHHHHHHHHHHHcCCEEEEecCC---CCHHHHHHHHHHHH------HcCCCEEEEcCCC-h-H---HhHHHHHHH
Confidence 3445555566766677889998887431 12222266677766 4677777775321 1 1 123444556
Q ss_pred HHcCCCEEEEec
Q 012991 217 RDEGVDQVFVDA 228 (452)
Q Consensus 217 ~~~~~~~~ivD~ 228 (452)
.+.+++.+++|.
T Consensus 77 ~~~~iPvV~~~~ 88 (272)
T cd06313 77 IARGIPVIDMGT 88 (272)
T ss_pred HHCCCcEEEeCC
Confidence 667886556664
No 494
>cd06298 PBP1_CcpA_like Ligand-binding domain of the catabolite control protein A (CcpA), which functions as the major transcriptional regulator of carbon catabolite repression/regulation. Ligand-binding domain of the catabolite control protein A (CcpA), which functions as the major transcriptional regulator of carbon catabolite repression/regulation (CCR), a process in which enzymes necessary for the metabolism of alternative sugars are inhibited in the presence of glucose. In gram-positive bacteria, CCR is controlled by HPr, a phosphoenolpyruvate:sugar phsophotrasnferase system (PTS) and a transcriptional regulator CcpA. Moreover, CcpA can regulate sporulation and antibiotic resistance as well as play a role in virulence development of certain pathogens such as the group A streptococcus. The ligand binding domain of CcpA is a member of the LacI-GalR family of bacterial transcription regulators.
Probab=26.12 E-value=3.7e+02 Score=24.08 Aligned_cols=76 Identities=9% Similarity=0.056 Sum_probs=41.2
Q ss_pred CCcchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHH
Q 012991 137 HCAFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKIC 216 (452)
Q Consensus 137 ~~~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~ 216 (452)
++-|......+...++..|..+...... ++.....+.++..+ ..+++.|++..... + +.+.+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~i~~l~------~~~vdgiii~~~~~------~-~~~~~~l 74 (268)
T cd06298 11 NSYFAELARGIDDIATMYKYNIILSNSD---NDKEKELKVLNNLL------AKQVDGIIFMGGKI------S-EEHREEF 74 (268)
T ss_pred chHHHHHHHHHHHHHHHcCCeEEEEeCC---CCHHHHHHHHHHHH------HhcCCEEEEeCCCC------c-HHHHHHH
Confidence 3445555666666678888888776421 11111144455544 35677777653211 1 2344556
Q ss_pred HHcCCCEEEEec
Q 012991 217 RDEGVDQVFVDA 228 (452)
Q Consensus 217 ~~~~~~~~ivD~ 228 (452)
++.+++.+.+|.
T Consensus 75 ~~~~ipvV~~~~ 86 (268)
T cd06298 75 KRSPTPVVLAGS 86 (268)
T ss_pred hcCCCCEEEEcc
Confidence 667885555664
No 495
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=26.03 E-value=63 Score=29.70 Aligned_cols=28 Identities=25% Similarity=0.358 Sum_probs=21.4
Q ss_pred cccccHHHHHHHHHHcCCCEEEEeccccc
Q 012991 204 CVVIPVRKLVKICRDEGVDQVFVDAAHAM 232 (452)
Q Consensus 204 G~~~~l~~i~~l~~~~~~~~~ivD~a~~~ 232 (452)
|.+-+.++|.++++++++ -++||++|-+
T Consensus 49 G~l~~~~~l~~~l~~~~i-~~VIDATHPf 76 (248)
T PRK08057 49 GGFGGAEGLAAYLREEGI-DLVIDATHPY 76 (248)
T ss_pred CCCCCHHHHHHHHHHCCC-CEEEECCCcc
Confidence 555477888888888888 6888888754
No 496
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=25.85 E-value=5.4e+02 Score=23.87 Aligned_cols=36 Identities=8% Similarity=0.135 Sum_probs=25.1
Q ss_pred eEEEEEeccCCCCcccccHHHHHHHHHHcCCCEEEEec
Q 012991 191 IRLAIIDHITSMPCVVIPVRKLVKICRDEGVDQVFVDA 228 (452)
Q Consensus 191 ~~lv~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ivD~ 228 (452)
..+++...|. .+|..++.+.+.++++.-++ .-+=|.
T Consensus 127 ~pi~lYn~P~-~~g~~ls~~~~~~L~~~p~v-~giK~s 162 (284)
T cd00950 127 LPVILYNVPG-RTGVNIEPETVLRLAEHPNI-VGIKEA 162 (284)
T ss_pred CCEEEEEChh-HhCCCCCHHHHHHHhcCCCE-EEEEEC
Confidence 4456665553 37999999999999965566 556564
No 497
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=25.76 E-value=1.4e+02 Score=26.71 Aligned_cols=48 Identities=10% Similarity=0.194 Sum_probs=31.0
Q ss_pred HHHHHHHHhccccCCCceEEEEEeccCCCCcccc-cHHHHHHHHHHcCCCEEEEec
Q 012991 174 INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVI-PVRKLVKICRDEGVDQVFVDA 228 (452)
Q Consensus 174 ~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~-~l~~i~~l~~~~~~~~~ivD~ 228 (452)
++.++++++ ....+|-+=.-+..+-... -.+++.++|++|++ .+++++
T Consensus 24 ~~~ve~al~------~Gv~~vQlR~K~~~~~~~~~~a~~~~~lc~~~~v-~liINd 72 (211)
T COG0352 24 LEWVEAALK------GGVTAVQLREKDLSDEEYLALAEKLRALCQKYGV-PLIIND 72 (211)
T ss_pred HHHHHHHHh------CCCeEEEEecCCCChHHHHHHHHHHHHHHHHhCC-eEEecC
Confidence 577777774 4455555544443333322 34688999999999 688875
No 498
>PF08423 Rad51: Rad51; InterPro: IPR013632 This domain is found at the C terminus of the DNA repair and recombination protein Rad51. It is critical for DNA binding []. Rad51 is a homologue of the bacterial RecA protein. Rad51 and RecA share a core ATPase domain.; PDB: 2ZUC_A 2Z43_C 2ZUD_B 2DFL_A 2ZUB_A 2BKE_A 2KZ3_A 2CVH_B 2CVF_B 1SZP_D ....
Probab=25.73 E-value=5.3e+02 Score=23.70 Aligned_cols=47 Identities=23% Similarity=0.367 Sum_probs=28.8
Q ss_pred HHHHHHHHhccccCCCceEEEEEeccCCCCcccc----c-----------HHHHHHHHHHcCCCEEEE
Q 012991 174 INEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVI----P-----------VRKLVKICRDEGVDQVFV 226 (452)
Q Consensus 174 ~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~----~-----------l~~i~~l~~~~~~~~~iv 226 (452)
++.+...+. ..++++|++.+.....-..+ + +..+..+|++|++ .|++
T Consensus 122 L~~l~~~l~-----~~~ikLIVIDSIaalfr~e~~~~~~~~~R~~~L~~~~~~L~~lA~~~~i-aVvv 183 (256)
T PF08423_consen 122 LEQLPKLLS-----ESKIKLIVIDSIAALFRSEFSGRGDLAERQRMLARLARILKRLARKYNI-AVVV 183 (256)
T ss_dssp HHHHHHHHH-----HSCEEEEEEETSSHHHHHHSGSTTTHHHHHHHHHHHHHHHHHHHHHTT--EEEE
T ss_pred HHHHHhhcc-----ccceEEEEecchHHHHHHHHccchhhHHHHHHHHHHHHHHHHHHHhCCc-eEEe
Confidence 555555554 35799999999876422111 1 1246778899998 4554
No 499
>cd01575 PBP1_GntR Ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. This group represents the ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of GntR is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type I periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type I periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding,
Probab=25.61 E-value=4.5e+02 Score=23.51 Aligned_cols=74 Identities=14% Similarity=0.156 Sum_probs=40.7
Q ss_pred cchhHHHHHHHHHHhcCcEEEEEeCCCCCCChHHHHHHHHHHHhccccCCCceEEEEEeccCCCCcccccHHHHHHHHHH
Q 012991 139 AFQAVKKSIQAYVTRAGGSVVEVQLPFPLASEEEIINEFKKGIEKGKKDGKMIRLAIIDHITSMPCVVIPVRKLVKICRD 218 (452)
Q Consensus 139 ~~~s~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~l~~~ 218 (452)
.|......+...++..|..+....... + .....+.++..+ ..++..|++..... + +...+.+++
T Consensus 13 ~~~~~~~gi~~~~~~~g~~~~~~~~~~--~-~~~~~~~~~~l~------~~~vdgiii~~~~~------~-~~~~~~~~~ 76 (268)
T cd01575 13 VFADVLQGISDVLEAAGYQLLLGNTGY--S-PEREEELLRTLL------SRRPAGLILTGLEH------T-ERTRQLLRA 76 (268)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEecCCC--C-chhHHHHHHHHH------HcCCCEEEEeCCCC------C-HHHHHHHHh
Confidence 344455666666788898887764321 1 111134444545 45677777754332 1 344556667
Q ss_pred cCCCEEEEec
Q 012991 219 EGVDQVFVDA 228 (452)
Q Consensus 219 ~~~~~~ivD~ 228 (452)
.+++.+.+|.
T Consensus 77 ~~ipvv~~~~ 86 (268)
T cd01575 77 AGIPVVEIMD 86 (268)
T ss_pred cCCCEEEEec
Confidence 7885444564
No 500
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=25.29 E-value=1.6e+02 Score=28.73 Aligned_cols=27 Identities=19% Similarity=0.415 Sum_probs=23.2
Q ss_pred ccHHHHHHHHHHcCCCEEEEecccccCC
Q 012991 207 IPVRKLVKICRDEGVDQVFVDAAHAMGS 234 (452)
Q Consensus 207 ~~l~~i~~l~~~~~~~~~ivD~a~~~g~ 234 (452)
.++..|..+.+++++ ++++|..|+.|.
T Consensus 274 ldl~~i~~lk~~~~~-PV~~d~~Hs~G~ 300 (360)
T PRK12595 274 LDISAVPILKQETHL-PVMVDVTHSTGR 300 (360)
T ss_pred cCHHHHHHHHHHhCC-CEEEeCCCCCcc
Confidence 588999888888999 699999998774
Done!