BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012997
(451 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana GN=IQD31 PE=1 SV=1
Length = 587
Score = 263 bits (671), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 190/470 (40%), Positives = 263/470 (55%), Gaps = 33/470 (7%)
Query: 5 ARRAFRTLKGIIRLQAVIRGHLVRRQAVITLRCLLGIVKFQALARGRRVRYSDIGIQVQK 64
ARRAF LKGIIRLQA+IRGHLVRRQAV TL ++GIV+ QA ARGR +R SDIG+QV +
Sbjct: 128 ARRAFWALKGIIRLQALIRGHLVRRQAVATLFSVMGIVRLQAFARGREIRKSDIGVQVYR 187
Query: 65 ICSSGKFQGANCSLSGVNSSTSLVKLSKNAVIRKLLASSPSDKPLCLRYDPGEPNSAWLW 124
C QG N + ++ + KL+ NA +KLLASSP P+ YD PNS +W
Sbjct: 188 KCRLQLLQG-NKLANPTDAYLGIKKLTANAFAQKLLASSPKVLPVHA-YDTSNPNSNLIW 245
Query: 125 LERWMKSRFWEPHYQLKRNVQSKSETKRGNSQTIENEKGMSKRNVRKSARTNIENSSSQF 184
LE W S FW+P Q K+ + K + N +E E K++VRK +N E+SS Q
Sbjct: 246 LENWSASCFWKPVPQPKKTISRKPQ----NRLLVEAESAKPKKSVRKVPASNFESSSVQT 301
Query: 185 ALESEKPKRNPRKVSSHLVD-SVQEHAQSDIEKVKRNTRKVPNSVKEA------SERLEV 237
+ E EKPKR+ RKVSS ++ E Q ++EKVKR+ RKV N V E+ S R EV
Sbjct: 302 SFEFEKPKRSFRKVSSQSIEPPAVEDPQIELEKVKRSLRKVHNPVVESSIQPQRSPRKEV 361
Query: 238 DNEKPKRSLKKASTSAPPDV--SVQFTGDSVDKSTDTTVSVAKQSDV---DTNLKLPEVV 292
EKPK ++K S+ P V + + + D+ +S + +V + + P +
Sbjct: 362 --EKPKLGVEKTRESSYPLVHETAEEPVNVCDEKKKQEISEQPEEEVHALEMEVHTPGPL 419
Query: 293 STVDELLDHPASDLQPAESDGKIENIKEAAKDI--------NSTDDQISNDNQKASQRRS 344
T +E LD + + +E KD N+ ++ +NQK S+++
Sbjct: 420 ET-NEALDSSLVNQIDSNEKAMVEEKPSMEKDTKEEKTPKPNNKENSAGKENQK-SRKKG 477
Query: 345 SLPAKIDVQE-NGLHST-PKVPSYMAPTESAKAKLRGQGSPRLA-HDGIDKNGTTRRHSL 401
S +K + +E NG H T P +PSYM T+SAKAKLR QGSP+ A DG +K RRHSL
Sbjct: 478 SATSKTEREESNGHHETSPSIPSYMQATKSAKAKLRLQGSPKSAEQDGTEKATVPRRHSL 537
Query: 402 PSSTSSKLSSLSPRVPRLVQTAGKGVVRADRSLTSSRDGGDKVIQAEWRR 451
PS + +++S SPR RL + K + ++ L SSR+G K AE +R
Sbjct: 538 PSPGNGRITSHSPRTTRLANSGDKTGNKKEKPLLSSREGNAKTTPAERKR 587
>sp|Q9FXI5|IQD32_ARATH Protein IQ-DOMAIN 32 OS=Arabidopsis thaliana GN=IQD32 PE=1 SV=3
Length = 794
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 147/327 (44%), Gaps = 50/327 (15%)
Query: 5 ARRAFRTLKGIIRLQAVIRGHLVRRQAVITLRCLLGIVKFQALARGRRVRYSDIGIQVQK 64
ARR K +I+LQA +RGHLVR QA+ +LRC+ IVK QA+ R R
Sbjct: 230 ARRELLRSKKVIKLQAAVRGHLVRSQAMGSLRCVQAIVKMQAMVRARHS----------- 278
Query: 65 ICSSGKFQGANCSLSGVNSSTSLVKLSKNAVIRKLLASSPSDKPLCLRYDPGEPNSAWLW 124
G A S N++ KL +N + L+ S+P KP+ ++ DP +P+SAW W
Sbjct: 279 -TKDGSRVSATSDKSEPNAAAQ--KLLENKFAKHLMESTPKTKPINIKCDPTKPSSAWNW 335
Query: 125 LERWMKSRFWEPHYQLKRNVQSKSETKRGNSQTIENEKGMSKRNVRKSARTNIENSSSQF 184
LERWM +P K N+ T E + +NV+ S + + NS S
Sbjct: 336 LERWMS--VPKPEKTSKANL------------TTEEQNLEETQNVKISPQADFVNSDSTV 381
Query: 185 A--LESEKPKRNPRKVSSHLVD-------SVQEHAQSDIEKVKRNTRKVPNSVKEAS--E 233
E++ P KV V+ S + ++ E + + P + K S E
Sbjct: 382 ENKTETDMPSYEASKVEGQNVELSETEKMSQYDSPEASAEVYYDSIQSQPLAAKPDSLLE 441
Query: 234 RLEVDNEKPKRSLKKASTSAPPDVSVQFTGDSVDKST--DTTVSVAKQSDV-----DTNL 286
E + + K SLK+ S P ++ Q + + ST + ++++ + DV T++
Sbjct: 442 EPEYVDGQIKHSLKR-KVSNPSFIAAQSKFEELTSSTGSNKAMTLSSKDDVLGEEGKTDI 500
Query: 287 KLPEVVSTVDELLDHPASDLQPAESDG 313
P+ +T+ DH D+ PAE G
Sbjct: 501 DSPDTTNTIK---DHSLEDVTPAELSG 524
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 363 VPSYMAPTESAKAKLRGQGSPRLAHDGIDKN--GTTRRHSLPSSTSSKLSSLSPRVPRLV 420
+P +M PT+SAKAK++ SPR + D +++ +RHSLP T+ K +SPR+ R
Sbjct: 723 LPRFMQPTQSAKAKVQEHNSPRSSPDLQERDVVSAKKRHSLPGVTNGK--QVSPRIQRSA 780
Query: 421 QTAGKGV 427
A +G
Sbjct: 781 SQAQQGT 787
>sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1
Length = 454
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 100/222 (45%), Gaps = 41/222 (18%)
Query: 5 ARRAFRTLKGIIRLQAVIRGHLVRRQAVITLRCLLGIVKFQALARGRRVRYSDIG----- 59
ARR + ++G RL+ ++ G +V+RQA ITL+C+ + + Q+ R RR+R S+
Sbjct: 123 ARRESQVMRGQERLKLLMEGSVVQRQAAITLKCMQTLSRVQSQIRSRRIRMSEENQARHK 182
Query: 60 --IQVQKICSSGKFQGANCSLSGVNSSTSLVK---LSK-NAVIRK-------------LL 100
+Q G G N + S N S V+ L K A +R+ L
Sbjct: 183 QLLQKHAKELGGLKNGGNWNYS--NQSKEQVEAGMLHKYEATMRRERALAYAFTHQQNLK 240
Query: 101 ASSPSDKPLCLRYDPGEPNSAWLWLERWMKSRFWEPHYQLKR-----NVQSKSETKRGNS 155
+ S + P+ + DP P W WLERWM R WE + + N K+ T R NS
Sbjct: 241 SFSKTANPMFM--DPSNPTWGWSWLERWMAGRPWESSEKEQNTTNNDNSSVKNSTNR-NS 297
Query: 156 QTIENEKGMSKRNVRKSARTNIENSSSQFALESEKPKRNPRK 197
Q E K ++ + S + N ++SS RNPRK
Sbjct: 298 QGGETAKSSNRNKLNSSTKPNTPSASSTAT-------RNPRK 332
>sp|Q8LPG9|IQD14_ARATH Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1
Length = 668
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 42/60 (70%)
Query: 5 ARRAFRTLKGIIRLQAVIRGHLVRRQAVITLRCLLGIVKFQALARGRRVRYSDIGIQVQK 64
AR++FR LKG++RLQ V+RG+ V+RQ + ++ + +V+ Q+ + RR++ + QV+K
Sbjct: 337 ARKSFRALKGLVRLQGVVRGYSVKRQTINAMKYMQQVVRVQSQIQSRRIKMLENQAQVEK 396
Score = 36.6 bits (83), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 354 ENGLHSTPKVPSYMAPTESAKAKLRGQGSPR 384
++ L S P PSYMAPT SAKAK+R +P+
Sbjct: 556 DDSLTSCPPFPSYMAPTVSAKAKVRPNSNPK 586
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.125 0.345
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 156,130,185
Number of Sequences: 539616
Number of extensions: 6333968
Number of successful extensions: 22035
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 609
Number of HSP's that attempted gapping in prelim test: 21369
Number of HSP's gapped (non-prelim): 1200
length of query: 451
length of database: 191,569,459
effective HSP length: 121
effective length of query: 330
effective length of database: 126,275,923
effective search space: 41671054590
effective search space used: 41671054590
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)