Query 012997
Match_columns 451
No_of_seqs 198 out of 415
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 20:16:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012997.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012997hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n2d_C IQ2 and IQ3 motifs from 97.8 4.5E-05 1.5E-09 55.5 6.2 42 13-55 4-45 (48)
2 1n2d_C IQ2 and IQ3 motifs from 97.7 1.7E-05 5.9E-10 57.7 3.4 30 1-30 14-46 (48)
3 2ix7_C Myosin-5A; contractIle 97.7 3.3E-05 1.1E-09 58.4 4.2 41 12-56 5-46 (58)
4 2ix7_C Myosin-5A; contractIle 97.5 0.00015 5.1E-09 54.8 5.7 31 1-31 16-47 (58)
5 2dfs_A Myosin-5A; myosin-V, in 97.4 0.00015 5.3E-09 83.1 7.0 55 1-56 779-834 (1080)
6 2dfs_A Myosin-5A; myosin-V, in 97.0 0.00066 2.3E-08 77.9 6.2 53 1-56 802-857 (1080)
7 2bl0_A Major plasmodial myosin 96.1 0.011 3.7E-07 45.4 6.0 42 14-55 6-47 (63)
8 1wdc_A Scallop myosin; calcium 96.1 0.012 4E-07 45.3 6.2 43 13-55 7-49 (64)
9 1kk8_A Myosin heavy chain, str 93.2 0.14 4.8E-06 57.4 7.6 48 8-55 775-822 (837)
10 1wdc_A Scallop myosin; calcium 92.9 0.086 2.9E-06 40.4 3.8 29 1-29 17-49 (64)
11 2bl0_A Major plasmodial myosin 92.7 0.062 2.1E-06 41.1 2.7 29 1-29 15-47 (63)
12 3gn4_A Myosin-VI; unconvention 91.8 0.23 7.8E-06 44.8 5.6 36 9-48 43-78 (148)
13 1i84_S Smooth muscle myosin he 90.3 0.41 1.4E-05 55.3 7.3 44 13-56 793-836 (1184)
14 1i84_S Smooth muscle myosin he 89.9 0.084 2.9E-06 61.0 1.2 44 1-48 803-850 (1184)
15 2l53_B CAM, voltage-gated sodi 67.1 3.5 0.00012 27.8 2.4 16 14-29 8-23 (31)
16 2kxw_B Sodium channel protein 54.7 5.8 0.0002 25.9 1.7 17 13-29 7-23 (27)
17 4anj_A Unconventional myosin-V 53.1 17 0.00057 41.9 6.2 44 11-54 773-816 (1052)
18 3gn4_A Myosin-VI; unconvention 31.8 21 0.00071 32.1 2.1 23 1-23 56-79 (148)
19 4anj_A Unconventional myosin-V 30.9 37 0.0013 39.1 4.5 30 1-30 785-815 (1052)
No 1
>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}
Probab=97.78 E-value=4.5e-05 Score=55.48 Aligned_cols=42 Identities=26% Similarity=0.308 Sum_probs=35.8
Q ss_pred hhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 012997 13 KGIIRLQAVIRGHLVRRQAVITLRCLLGIVKFQALARGRRVRY 55 (451)
Q Consensus 13 KglVRLQAlvRGhlVRRQAa~TLrcmqaiVRvQA~IRgrrVR~ 55 (451)
+.+|.||+.+||+++|++.. .++...+.|.+|+.+||..+|.
T Consensus 4 ~a~i~iQ~~~Rg~l~R~~~~-~~~~~~aai~IQ~~~Rg~~~Rk 45 (48)
T 1n2d_C 4 QAIKYLQNNIKGFIIRQRVN-DEMKVNCATLLQAAYRGHSIRA 45 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhHHHHH
Confidence 57899999999999999654 3455679999999999999885
No 2
>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}
Probab=97.74 E-value=1.7e-05 Score=57.71 Aligned_cols=30 Identities=27% Similarity=0.290 Sum_probs=27.8
Q ss_pred ChhhHHHHHHHhh---hhHHHHHHhhhHHHHHH
Q 012997 1 MALKARRAFRTLK---GIIRLQAVIRGHLVRRQ 30 (451)
Q Consensus 1 rgyLARRalraLK---glVRLQAlvRGhlVRRQ 30 (451)
||||||+.+..++ ++|.||+.+|||++|+.
T Consensus 14 Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~Rk~ 46 (48)
T 1n2d_C 14 KGFIIRQRVNDEMKVNCATLLQAAYRGHSIRAN 46 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHh
Confidence 7999999998876 89999999999999984
No 3
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}
Probab=97.68 E-value=3.3e-05 Score=58.44 Aligned_cols=41 Identities=32% Similarity=0.547 Sum_probs=33.2
Q ss_pred hhhhHHHHHHhhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhhc
Q 012997 12 LKGIIRLQAVIRGHLVRRQAVITLRCLL-GIVKFQALARGRRVRYS 56 (451)
Q Consensus 12 LKglVRLQAlvRGhlVRRQAa~TLrcmq-aiVRvQA~IRgrrVR~s 56 (451)
..++|.||+.+|||++|+ .|..|. ++|.+|+.+||..+|..
T Consensus 5 ~~aai~IQ~~~Rg~~~Rk----~~~~~r~aai~IQ~~~Rg~~aR~~ 46 (58)
T 2ix7_C 5 RAACIRIQKTIRGWLLRK----RYLCMQRAAITVQRYVRGYQARCY 46 (58)
T ss_dssp HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357889999999999999 555554 88999999999888864
No 4
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}
Probab=97.50 E-value=0.00015 Score=54.82 Aligned_cols=31 Identities=23% Similarity=0.308 Sum_probs=28.8
Q ss_pred ChhhHHHHHHHhh-hhHHHHHHhhhHHHHHHH
Q 012997 1 MALKARRAFRTLK-GIIRLQAVIRGHLVRRQA 31 (451)
Q Consensus 1 rgyLARRalraLK-glVRLQAlvRGhlVRRQA 31 (451)
|||++|+.|..|+ ++|.||+.+|||++|+..
T Consensus 16 Rg~~~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~ 47 (58)
T 2ix7_C 16 RGWLLRKRYLCMQRAAITVQRYVRGYQARCYA 47 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7999999999998 799999999999999944
No 5
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=97.41 E-value=0.00015 Score=83.07 Aligned_cols=55 Identities=25% Similarity=0.306 Sum_probs=46.6
Q ss_pred ChhhHHHHHHHhh-hhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 012997 1 MALKARRAFRTLK-GIIRLQAVIRGHLVRRQAVITLRCLLGIVKFQALARGRRVRYS 56 (451)
Q Consensus 1 rgyLARRalraLK-glVRLQAlvRGhlVRRQAa~TLrcmqaiVRvQA~IRgrrVR~s 56 (451)
||||+|+.|+.++ +++.||+++|||++|+++. .++...+.+++|+.+||.++|..
T Consensus 779 Rg~l~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~-~lr~~~AAi~IQs~~Rg~~~Rk~ 834 (1080)
T 2dfs_A 779 RGWLMRKKYMRMRRAAITIQRYVRGHQARCYAT-FLRRTRAAIIIQKFQRMYVVRKR 834 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHhhccc-ccccchhHHHHHHHHhhHHHHHH
Confidence 7999999998875 5899999999999998654 46778888999999999888874
No 6
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=96.97 E-value=0.00066 Score=77.88 Aligned_cols=53 Identities=26% Similarity=0.194 Sum_probs=42.8
Q ss_pred ChhhHHHHHHH---hhhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 012997 1 MALKARRAFRT---LKGIIRLQAVIRGHLVRRQAVITLRCLLGIVKFQALARGRRVRYS 56 (451)
Q Consensus 1 rgyLARRalra---LKglVRLQAlvRGhlVRRQAa~TLrcmqaiVRvQA~IRgrrVR~s 56 (451)
|||+||+.++. .+++++||+.+|||++|++.... ..++|.+|+.+||+.+|..
T Consensus 802 Rg~~aR~~~~~lr~~~AAi~IQs~~Rg~~~Rk~y~~l---r~aai~IQs~~Rg~laRr~ 857 (1080)
T 2dfs_A 802 RGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCM---RDATIALQALLRGYLVRNK 857 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcccccccchhHHHHHHHHhhHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 78999987654 57899999999999999954332 3678999999999988864
No 7
>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=96.10 E-value=0.011 Score=45.42 Aligned_cols=42 Identities=17% Similarity=-0.011 Sum_probs=36.6
Q ss_pred hhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 012997 14 GIIRLQAVIRGHLVRRQAVITLRCLLGIVKFQALARGRRVRY 55 (451)
Q Consensus 14 glVRLQAlvRGhlVRRQAa~TLrcmqaiVRvQA~IRgrrVR~ 55 (451)
-++.+||.+|||++|+.....+.-..|+.=+|.-+|+...++
T Consensus 6 i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr 47 (63)
T 2bl0_A 6 IVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFK 47 (63)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 489999999999999987777777789999999999887765
No 8
>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A
Probab=96.08 E-value=0.012 Score=45.28 Aligned_cols=43 Identities=30% Similarity=0.203 Sum_probs=37.2
Q ss_pred hhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 012997 13 KGIIRLQAVIRGHLVRRQAVITLRCLLGIVKFQALARGRRVRY 55 (451)
Q Consensus 13 KglVRLQAlvRGhlVRRQAa~TLrcmqaiVRvQA~IRgrrVR~ 55 (451)
.-++.+||++|||++|+.....+.-..|+.=+|.-+|+...++
T Consensus 7 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~ 49 (64)
T 1wdc_A 7 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR 49 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3489999999999999987777777789999999999887765
No 9
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=93.21 E-value=0.14 Score=57.43 Aligned_cols=48 Identities=29% Similarity=0.162 Sum_probs=37.2
Q ss_pred HHHHhhhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 012997 8 AFRTLKGIIRLQAVIRGHLVRRQAVITLRCLLGIVKFQALARGRRVRY 55 (451)
Q Consensus 8 alraLKglVRLQAlvRGhlVRRQAa~TLrcmqaiVRvQA~IRgrrVR~ 55 (451)
..+--+-+++|||++|||++||.....+..-.+++.+|.-+|+...|+
T Consensus 775 ~~~l~~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r 822 (837)
T 1kk8_A 775 DERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR 822 (837)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 333334588999999999999955444444489999999999998876
No 10
>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A
Probab=92.90 E-value=0.086 Score=40.37 Aligned_cols=29 Identities=34% Similarity=0.466 Sum_probs=25.9
Q ss_pred ChhhHHHHHHHh----hhhHHHHHHhhhHHHHH
Q 012997 1 MALKARRAFRTL----KGIIRLQAVIRGHLVRR 29 (451)
Q Consensus 1 rgyLARRalraL----KglVRLQAlvRGhlVRR 29 (451)
||||||+.|..+ .|+.-||.-||+|+.++
T Consensus 17 RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~ 49 (64)
T 1wdc_A 17 RGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR 49 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 799999999987 46668999999999988
No 11
>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=92.72 E-value=0.062 Score=41.09 Aligned_cols=29 Identities=24% Similarity=0.211 Sum_probs=25.8
Q ss_pred ChhhHHHHHHHh----hhhHHHHHHhhhHHHHH
Q 012997 1 MALKARRAFRTL----KGIIRLQAVIRGHLVRR 29 (451)
Q Consensus 1 rgyLARRalraL----KglVRLQAlvRGhlVRR 29 (451)
||||||+.|..+ .|+.-||.-||+|+.+|
T Consensus 15 RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr 47 (63)
T 2bl0_A 15 RGWVERKHFRQAREKSVSARIIQDNIRAYLEFK 47 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 799999999887 46668999999999988
No 12
>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}
Probab=91.76 E-value=0.23 Score=44.81 Aligned_cols=36 Identities=31% Similarity=0.489 Sum_probs=28.0
Q ss_pred HHHhhhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012997 9 FRTLKGIIRLQAVIRGHLVRRQAVITLRCLLGIVKFQALA 48 (451)
Q Consensus 9 lraLKglVRLQAlvRGhlVRRQAa~TLrcmqaiVRvQA~I 48 (451)
+|+ ..+|++|..|||||+||+ ---++.||+++-|+-
T Consensus 43 yR~-~~~i~iQktvR~~L~rkk---hkPRi~g~~kv~~L~ 78 (148)
T 3gn4_A 43 YRA-EACIKMQKTIRMWLCKRR---HKPRIDGLVKVGTLK 78 (148)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
T ss_pred HHH-HHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHH
Confidence 444 789999999999999993 234678888877764
No 13
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=90.32 E-value=0.41 Score=55.35 Aligned_cols=44 Identities=27% Similarity=0.153 Sum_probs=36.4
Q ss_pred hhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 012997 13 KGIIRLQAVIRGHLVRRQAVITLRCLLGIVKFQALARGRRVRYS 56 (451)
Q Consensus 13 KglVRLQAlvRGhlVRRQAa~TLrcmqaiVRvQA~IRgrrVR~s 56 (451)
+-++.||+.+|||++|+.....++...+++.+|+.+|+...|+.
T Consensus 793 ~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~ 836 (1184)
T 1i84_S 793 DVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXH 836 (1184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 45789999999999999666555556799999999999988764
No 14
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=89.89 E-value=0.084 Score=60.98 Aligned_cols=44 Identities=18% Similarity=0.189 Sum_probs=34.7
Q ss_pred ChhhHHHHHHHh----hhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012997 1 MALKARRAFRTL----KGIIRLQAVIRGHLVRRQAVITLRCLLGIVKFQALA 48 (451)
Q Consensus 1 rgyLARRalraL----KglVRLQAlvRGhlVRRQAa~TLrcmqaiVRvQA~I 48 (451)
||||||+.|..+ .+++.||+.+|||++|| .+..|+.+.+++.++
T Consensus 803 Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k----~~~~~rl~~klkpLl 850 (1184)
T 1i84_S 803 RGYLARKAFAKRQQQLESIFCIQYNVRSFMNVX----HWPWMXLFFXIXPLL 850 (1184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TCHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hhHHHHHHHHHHHHH
Confidence 799999999987 48999999999999998 444555555555444
No 15
>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}
Probab=67.06 E-value=3.5 Score=27.80 Aligned_cols=16 Identities=31% Similarity=0.580 Sum_probs=14.5
Q ss_pred hhHHHHHHhhhHHHHH
Q 012997 14 GIIRLQAVIRGHLVRR 29 (451)
Q Consensus 14 glVRLQAlvRGhlVRR 29 (451)
..+-+|-+||||+.||
T Consensus 8 aA~vIQrA~R~yl~rr 23 (31)
T 2l53_B 8 SAMVIQRAFRRHLLQR 23 (31)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5688999999999998
No 16
>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}
Probab=54.73 E-value=5.8 Score=25.87 Aligned_cols=17 Identities=24% Similarity=0.309 Sum_probs=14.8
Q ss_pred hhhHHHHHHhhhHHHHH
Q 012997 13 KGIIRLQAVIRGHLVRR 29 (451)
Q Consensus 13 KglVRLQAlvRGhlVRR 29 (451)
.+.+-+|-+||||+.|+
T Consensus 7 ~aA~vIQrA~R~yl~~~ 23 (27)
T 2kxw_B 7 VSAIVIQRAYRRYLLKQ 23 (27)
T ss_dssp HHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 45788999999999986
No 17
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=53.13 E-value=17 Score=41.92 Aligned_cols=44 Identities=14% Similarity=0.153 Sum_probs=26.2
Q ss_pred HhhhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 012997 11 TLKGIIRLQAVIRGHLVRRQAVITLRCLLGIVKFQALARGRRVR 54 (451)
Q Consensus 11 aLKglVRLQAlvRGhlVRRQAa~TLrcmqaiVRvQA~IRgrrVR 54 (451)
.|..++.+|+-+||+++||+---..++.-.|+++|-.++.|+++
T Consensus 773 ~~~~~~~~iq~~r~~l~r~~~~k~~~~a~~i~~~~r~~~~r~~~ 816 (1052)
T 4anj_A 773 DPDHLAELVKRVNHWLICSRWKKVQWCSLSVIKLKNKIKYRAEA 816 (1052)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 35677888888999999996443333333344444444444333
No 18
>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}
Probab=31.81 E-value=21 Score=32.08 Aligned_cols=23 Identities=9% Similarity=0.390 Sum_probs=19.6
Q ss_pred ChhhHHHHHH-HhhhhHHHHHHhh
Q 012997 1 MALKARRAFR-TLKGIIRLQAVIR 23 (451)
Q Consensus 1 rgyLARRalr-aLKglVRLQAlvR 23 (451)
||||||+-++ .+.|++++.||..
T Consensus 56 R~~L~rkkhkPRi~g~~kv~~L~~ 79 (148)
T 3gn4_A 56 RMWLCKRRHKPRIDGLVKVGTLKK 79 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHH
Confidence 7999999886 5689999998874
No 19
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=30.93 E-value=37 Score=39.12 Aligned_cols=30 Identities=3% Similarity=-0.023 Sum_probs=24.8
Q ss_pred ChhhHHHHHHHhh-hhHHHHHHhhhHHHHHH
Q 012997 1 MALKARRAFRTLK-GIIRLQAVIRGHLVRRQ 30 (451)
Q Consensus 1 rgyLARRalraLK-glVRLQAlvRGhlVRRQ 30 (451)
||||+||.++.|+ +.+.+|.+-||+..|+.
T Consensus 785 r~~l~r~~~~k~~~~a~~i~~~~r~~~~r~~ 815 (1052)
T 4anj_A 785 NHWLICSRWKKVQWCSLSVIKLKNKIKYRAE 815 (1052)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999998887 57888888888877763
Done!