Your job contains 1 sequence.
>012998
MSMAQAVSLPRILVSTDASKALSKQAASTRKPRTSISTKKRAKVSPSRRTQNLNLEVSPH
RAVSAVRLMRIQFGGAFADLLNKKGKGSGDNEMGYVERTLGFRTKDLDDRDLRLVTDIVG
GTIRWRRYLDHLICLLCHDEKTFSSMEPLLLQILRIGFYEIVKLDMPPYAVVDENVRLAK
VALRPGAGNLVNGILRKLVLLKDNNSLPLPKLEGNDRAQARALATIYSHPVWMVRRWTKY
LGQEEAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKVPHELSLHLDEFIRVKTG
LQNVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGL
VYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVL
SKRADLRWNRRLEDMEELKILQDELLDAASL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012998
(451 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2090054 - symbol:AT3G13180 species:3702 "Arabi... 1706 1.2e-175 1
TIGR_CMR|CHY_1481 - symbol:CHY_1481 "sun protein" species... 443 8.4e-42 1
UNIPROTKB|Q81WH3 - symbol:sun "Sun protein" species:1392 ... 398 4.9e-37 1
TIGR_CMR|BA_4003 - symbol:BA_4003 "sun protein" species:1... 398 4.9e-37 1
TIGR_CMR|GSU_3373 - symbol:GSU_3373 "Sun protein" species... 393 1.7e-36 1
TIGR_CMR|CPS_0018 - symbol:CPS_0018 "sun protein" species... 320 1.3e-28 1
UNIPROTKB|Q9KVU5 - symbol:rsmB "Ribosomal RNA small subun... 312 4.0e-27 1
TIGR_CMR|VC_0044 - symbol:VC_0044 "sun protein" species:6... 312 4.0e-27 1
UNIPROTKB|P36929 - symbol:rsmB "16S rRNA m5C967 methyltra... 300 2.8e-25 1
TIGR_CMR|CBU_1915 - symbol:CBU_1915 "Sun protein" species... 282 8.0e-23 1
TIGR_CMR|SO_2215 - symbol:SO_2215 "sun protein, putative"... 265 6.6e-21 1
UNIPROTKB|P71675 - symbol:MT1451 "Putative methyltransfer... 261 4.4e-20 1
TIGR_CMR|SO_0030 - symbol:SO_0030 "sun protein" species:2... 247 1.5e-18 1
MGI|MGI:107891 - symbol:Nop2 "NOP2 nucleolar protein" spe... 239 5.8e-17 1
DICTYBASE|DDB_G0281685 - symbol:nol1 "NOL1/NOP2/Sun famil... 233 1.9e-16 1
RGD|1304616 - symbol:Nop2 "NOP2 nucleolar protein" specie... 232 3.3e-16 1
UNIPROTKB|E2RCH6 - symbol:NOP2 "Uncharacterized protein" ... 229 8.1e-16 1
UNIPROTKB|F1N3G2 - symbol:NOP2 "Uncharacterized protein" ... 228 1.0e-15 1
UNIPROTKB|P46087 - symbol:NOP2 "Putative ribosomal RNA me... 225 2.2e-15 1
UNIPROTKB|F1SLR6 - symbol:NOP2 "Uncharacterized protein" ... 223 3.7e-15 1
UNIPROTKB|F1NH85 - symbol:Gga.5513 "Uncharacterized prote... 220 3.8e-15 1
UNIPROTKB|F1NK16 - symbol:Gga.5513 "Uncharacterized prote... 220 6.5e-15 1
ZFIN|ZDB-GENE-050309-7 - symbol:nop2 "NOP2 nucleolar prot... 220 6.8e-15 1
TAIR|locus:2178393 - symbol:OLI2 "OLIGOCELLULA 2" species... 217 1.2e-14 2
UNIPROTKB|Q0C183 - symbol:HNE_1806 "NOL1/NOP2/sun domain ... 213 1.3e-14 1
POMBASE|SPBP8B7.20c - symbol:SPBP8B7.20c "RNA methyltrans... 216 1.3e-14 1
UNIPROTKB|G4MY77 - symbol:MGG_01292 "Nucleolar protein NO... 212 4.6e-14 1
UNIPROTKB|Q0BWV2 - symbol:HNE_3368 "Putative ribosomal RN... 183 7.3e-14 2
TAIR|locus:2133832 - symbol:AT4G26600 species:3702 "Arabi... 214 8.0e-14 2
SGD|S000005005 - symbol:NOP2 "Probable RNA m(5)C methyltr... 208 1.1e-13 1
CGD|CAL0000046 - symbol:orf19.501 species:5476 "Candida a... 205 1.2e-13 2
WB|WBGene00021073 - symbol:nol-1 species:6239 "Caenorhabd... 207 1.6e-13 1
UNIPROTKB|Q60343 - symbol:trm4 "tRNA (cytosine(48)-C(5))-... 189 6.5e-13 1
UNIPROTKB|Q3AAI6 - symbol:CHY_2029 "NOL1/NOP2/sun family ... 195 1.6e-12 1
TIGR_CMR|CHY_2029 - symbol:CHY_2029 "NOL1/NOP2/sun family... 195 1.6e-12 1
FB|FBgn0033741 - symbol:CG8545 species:7227 "Drosophila m... 198 2.5e-12 1
TAIR|locus:2179749 - symbol:AT5G26180 "AT5G26180" species... 197 3.8e-12 2
ASPGD|ASPL0000013404 - symbol:AN8073 species:162425 "Emer... 192 9.5e-12 1
TIGR_CMR|SPO_3376 - symbol:SPO_3376 "ribosomal RNA small ... 187 1.6e-11 2
UNIPROTKB|P76273 - symbol:rsmF "16S rRNA m5C1407 methyltr... 186 1.8e-11 1
UNIPROTKB|F1RWA0 - symbol:NSUN6 "Uncharacterized protein"... 184 3.0e-11 1
RGD|1309535 - symbol:Nsun6 "NOP2/Sun domain family, membe... 184 3.0e-11 1
UNIPROTKB|E1BQJ7 - symbol:NSUN6 "Uncharacterized protein"... 181 6.4e-11 1
UNIPROTKB|E2RDT7 - symbol:NSUN6 "Uncharacterized protein"... 181 6.4e-11 1
TIGR_CMR|SPO_2037 - symbol:SPO_2037 "NOL1/NOP2/sun family... 177 1.2e-10 1
UNIPROTKB|F1MC44 - symbol:NSUN6 "Uncharacterized protein"... 175 2.2e-10 1
TIGR_CMR|SO_1575 - symbol:SO_1575 "NOL1/NOP2/sun family p... 174 3.7e-10 1
UNIPROTKB|Q8TEA1 - symbol:NSUN6 "Putative methyltransfera... 171 8.3e-10 1
GENEDB_PFALCIPARUM|PFL1475w - symbol:PFL1475w "sun-family... 168 1.1e-09 1
UNIPROTKB|Q8I5B4 - symbol:PFL1475w "Sun-family protein, p... 168 1.1e-09 1
MGI|MGI:2140844 - symbol:Nsun5 "NOL1/NOP2/Sun domain fami... 169 1.4e-09 1
UNIPROTKB|Q749J3 - symbol:GSU2749 "NOL1/NOP2/Sun (TRNA an... 164 1.9e-09 1
TIGR_CMR|GSU_2749 - symbol:GSU_2749 "NOL1/NOP2/sun family... 164 1.9e-09 1
MGI|MGI:1921705 - symbol:Nsun6 "NOL1/NOP2/Sun domain fami... 167 2.4e-09 1
UNIPROTKB|Q8EDY2 - symbol:rsmF "Ribosomal RNA small subun... 166 3.0e-09 1
TIGR_CMR|SO_2609 - symbol:SO_2609 "NOL1/NOP2/sun family p... 166 3.0e-09 1
UNIPROTKB|Q9V106 - symbol:PYRAB06230 "tRNA (cytosine(49)-... 162 3.0e-09 1
POMBASE|SPAC2C4.06c - symbol:SPAC2C4.06c "tRNA (cytosine-... 161 1.0e-08 1
UNIPROTKB|Q96P11 - symbol:NSUN5 "Putative methyltransfera... 158 1.9e-08 1
FB|FBgn0037200 - symbol:CG11109 species:7227 "Drosophila ... 157 2.6e-08 1
UNIPROTKB|Q5HVD5 - symbol:CJE0739 "NOL1/NOP2/sun family p... 152 2.9e-08 1
TIGR_CMR|CJE_0739 - symbol:CJE_0739 "NOL1/NOP2/sun family... 152 2.9e-08 1
ZFIN|ZDB-GENE-040426-2476 - symbol:nsun5 "NOP2/Sun domain... 156 4.1e-08 1
UNIPROTKB|Q9KRY1 - symbol:rsmF "Ribosomal RNA small subun... 151 1.4e-07 1
TIGR_CMR|VC_1502 - symbol:VC_1502 "NOL1/NOP2/sun family p... 151 1.4e-07 1
UNIPROTKB|Q9H649 - symbol:NSUN3 "Putative methyltransfera... 145 3.3e-07 1
TAIR|locus:2009170 - symbol:AT1G06560 species:3702 "Arabi... 133 3.5e-07 2
UNIPROTKB|Q0P5D8 - symbol:NSUN3 "Putative methyltransfera... 144 5.2e-07 2
MGI|MGI:2146565 - symbol:Nsun3 "NOL1/NOP2/Sun domain fami... 140 1.3e-06 1
SGD|S000004967 - symbol:YNL022C "Putative cytosine 5-meth... 138 4.0e-06 1
ZFIN|ZDB-GENE-050706-95 - symbol:nsun3 "NOP2/Sun domain f... 132 1.2e-05 1
ZFIN|ZDB-GENE-041212-77 - symbol:nsun4 "NOL1/NOP2/Sun dom... 130 1.5e-05 1
DICTYBASE|DDB_G0267872 - symbol:DDB_G0267872 "NOL1/NOP2/S... 129 2.9e-05 2
FB|FBgn0026079 - symbol:Nsun2 "NOP2-Sun domain family, me... 132 3.4e-05 1
UNIPROTKB|F1S3W1 - symbol:NSUN4 "Uncharacterized protein"... 119 0.00034 1
CGD|CAL0003354 - symbol:orf19.2604 species:5476 "Candida ... 123 0.00046 2
UNIPROTKB|Q5A962 - symbol:CaO19.10135 "Putative uncharact... 123 0.00046 2
UNIPROTKB|Q0V8R7 - symbol:NSUN4 "5-methylcytosine rRNA me... 116 0.00072 1
>TAIR|locus:2090054 [details] [associations]
symbol:AT3G13180 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] [GO:0045036
"protein targeting to chloroplast" evidence=RCA] InterPro:IPR006027
Pfam:PF01029 Pfam:PF01189 EMBL:CP002686 GO:GO:0006355 GO:GO:0003723
GO:GO:0008168 eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 Gene3D:1.10.940.10 SUPFAM:SSF48013 KO:K03500
HSSP:O50082 OMA:TSHPEWL EMBL:AY072189 EMBL:AY117322 EMBL:AK226254
IPI:IPI00520160 RefSeq:NP_187924.2 UniGene:At.39475
ProteinModelPortal:Q8VYC4 SMR:Q8VYC4 STRING:Q8VYC4 PRIDE:Q8VYC4
EnsemblPlants:AT3G13180.1 GeneID:820508 KEGG:ath:AT3G13180
TAIR:At3g13180 InParanoid:Q8VYC4 PhylomeDB:Q8VYC4
ProtClustDB:CLSN2690539 ArrayExpress:Q8VYC4 Genevestigator:Q8VYC4
InterPro:IPR023268 PRINTS:PR02009 Uniprot:Q8VYC4
Length = 523
Score = 1706 (605.6 bits), Expect = 1.2e-175, P = 1.2e-175
Identities = 325/448 (72%), Positives = 383/448 (85%)
Query: 3 MAQAVSLPRILVSTDASKALSKQAASTRKPRTSISTKKRAKVSPSRRTQNLNLEVSPHRA 62
MAQ +S R+ +S + KA T+K R S +R V+PSR++QNLNLEVSPHRA
Sbjct: 1 MAQLLSF-RVYLSAETQKASPGSFKRTQKTRKPFSPDRRGPVAPSRKSQNLNLEVSPHRA 59
Query: 63 VSAVRLMRIQFGGAFADLLNKKGKGSGDNEMGYVERTLGFRTKXXXXXXXXXVTDIVGGT 122
VSAVRLMRI++GGAFADLLN+KGKGSG NEM YVERT+GFRT+ VTD+VGGT
Sbjct: 60 VSAVRLMRIEYGGAFADLLNEKGKGSGSNEMSYVERTIGFRTRDLDDRDLRLVTDVVGGT 119
Query: 123 IRWRRYLDHLICLLCHDEKTFSSMEPLLLQILRIGFYEIVKLDMPPYAVVDENVRLAKVA 182
IRWRRYLDHLI LCH+E+TF +MEPLLLQILRIG YEI+K DMPPYAVVDENVRLAKVA
Sbjct: 120 IRWRRYLDHLIGSLCHNERTFRNMEPLLLQILRIGVYEIIKRDMPPYAVVDENVRLAKVA 179
Query: 183 LRPGAGNLVNGILRKLVLLKDNNSLPLPKLEGNDRAQARALATIYSHPVWMVRRWTKYLG 242
LRPGAG+ VNGILRKLV LK+ ++LPLPK+EG+DRAQARALAT++SHPVWMVRRW KYLG
Sbjct: 180 LRPGAGDFVNGILRKLVSLKEKDALPLPKVEGDDRAQARALATLHSHPVWMVRRWVKYLG 239
Query: 243 QEEAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKVPHELSLHLDEFIRVKTGLQ 302
+EA KLM+WNN+DP FSLRAN+ + +TRADLV +LN LKVPHELSLHL+EF+R+KTGLQ
Sbjct: 240 LDEATKLMIWNNNDPGFSLRANTGRDITRADLVERLNSLKVPHELSLHLEEFVRIKTGLQ 299
Query: 303 NVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVY 362
V+QAGLLKEG+C+VQDESAGL+V+VV PQPG+ I+D CAAPGGKTL+MASCL GQG++Y
Sbjct: 300 TVVQAGLLKEGICSVQDESAGLIVSVVKPQPGERIMDACAAPGGKTLFMASCLKGQGMIY 359
Query: 363 AIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSK 422
A+D+N+GRLRIL ETAK HQV+ +I TIH+DLR FA+ + V+ DKVLLDAPCSGLGVLSK
Sbjct: 360 AMDVNEGRLRILGETAKSHQVDGLITTIHSDLRVFAETNEVQYDKVLLDAPCSGLGVLSK 419
Query: 423 RADLRWNRRLEDMEELKILQDELLDAAS 450
RADLRWNR+LEDM EL LQDELLD+AS
Sbjct: 420 RADLRWNRKLEDMLELTKLQDELLDSAS 447
>TIGR_CMR|CHY_1481 [details] [associations]
symbol:CHY_1481 "sun protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0000154 "rRNA
modification" evidence=ISS] [GO:0008649 "rRNA methyltransferase
activity" evidence=ISS] InterPro:IPR004573 InterPro:IPR006027
Pfam:PF01029 Pfam:PF01189 GO:GO:0005737 GO:GO:0006355 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0003723 GO:GO:0031167 GO:GO:0008649
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
Gene3D:1.10.940.10 SUPFAM:SSF48013 HOGENOM:HOG000037300 KO:K03500
OMA:KPPMWLR TIGRFAMs:TIGR00563 RefSeq:YP_360313.1
ProteinModelPortal:Q3AC21 STRING:Q3AC21 GeneID:3726975
KEGG:chy:CHY_1481 PATRIC:21276093
BioCyc:CHYD246194:GJCN-1480-MONOMER Uniprot:Q3AC21
Length = 440
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 104/337 (30%), Positives = 185/337 (54%)
Query: 115 VTDIVGGTIRWRRYLDHLICLLCHDEKTFSSMEPLLLQILRIGFYEIVKLD-MPPYAVVD 173
V ++ G ++ + LD++ L K S + P ++ +R+G Y++ LD +P YA ++
Sbjct: 41 VVELTYGVLKQLKLLDYMAGKLL---KKRSKLPPFVINAIRVGLYQLYFLDKVPTYAAIN 97
Query: 174 ENVRLAKVALRPGAGNLVNGILRKLVLLKDNNSLPLPKLEGNDRAQARALATIYSHPVWM 233
E V K R G +VNG+LR + ++ + K++ +D + A+A YSHP WM
Sbjct: 98 ETVEAVKRNYR-GFTGVVNGVLRNFIRRREE----ITKIDVSDEVEYLAIA--YSHPEWM 150
Query: 234 VRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRKGVTRA--DLVMQ--LNLLKVPHELSL 289
V+RW G + ++++ +NN P+ +LR N+ K +A DL+ + +N ++P+ L
Sbjct: 151 VKRWLNQYGYTKTVEILKYNNHQPNLTLRINTLKISPKAYCDLLNEKNINFKQLPY---L 207
Query: 290 HLDEFIRVKTGLQNVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTL 349
I K G++ + G EGL +QD + + +++P+P +D CAAPGGK+
Sbjct: 208 PEGVVILDKVGVKEL--PGY-DEGLFYIQDTGSMFIAYLINPEPNSVGIDACAAPGGKST 264
Query: 350 YMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 409
++A + +G++YA D++ GRL+++ E A +N +IR + D V + +L
Sbjct: 265 HLAQLMGNKGIIYAFDVHPGRLKLIEENAHRLGIN-IIRCLLGDATRLKLPDGVNPNWIL 323
Query: 410 LDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELL 446
D PCSG GVL+++ D RW + E++ +L Q E+L
Sbjct: 324 ADVPCSGTGVLARKPDARWQKSEEEIIKLSQYQLEIL 360
>UNIPROTKB|Q81WH3 [details] [associations]
symbol:sun "Sun protein" species:1392 "Bacillus anthracis"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR004573
InterPro:IPR006027 InterPro:IPR018314 Pfam:PF01029 PROSITE:PS01153
Pfam:PF01189 GO:GO:0005737 GO:GO:0006355 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
GO:GO:0031167 GO:GO:0008649 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 Gene3D:1.10.940.10 SUPFAM:SSF48013
HOGENOM:HOG000037300 KO:K03500 TIGRFAMs:TIGR00563 HSSP:O50082
OMA:TSHPEWL RefSeq:NP_846245.1 RefSeq:YP_020643.1
RefSeq:YP_029967.1 ProteinModelPortal:Q81WH3 DNASU:1086737
EnsemblBacteria:EBBACT00000011480 EnsemblBacteria:EBBACT00000014895
EnsemblBacteria:EBBACT00000021944 GeneID:1086737 GeneID:2815784
GeneID:2852994 KEGG:ban:BA_4003 KEGG:bar:GBAA_4003 KEGG:bat:BAS3716
ProtClustDB:PRK14902 BioCyc:BANT260799:GJAJ-3774-MONOMER
BioCyc:BANT261594:GJ7F-3891-MONOMER Uniprot:Q81WH3
Length = 444
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 106/335 (31%), Positives = 177/335 (52%)
Query: 115 VTDIVGGTIRWRRYLDHLICLLCHDEKTFSSMEPLLLQILRIGFYEIVKLD-MPPYAVVD 173
+T+IV GTI+ R LD+ + + +E + +LR+ Y+++ LD +P A +
Sbjct: 44 LTEIVYGTIQRRDTLDYYLQPFLKKK-----VEAWVRVLLRLSLYQMIYLDRVPERAAIH 98
Query: 174 ENVRLAKVALRPGAGNLVNGILRKLVLLKDNNSLPLPKLEGNDRAQARALATIYSHPVWM 233
E V +AK G +VNG+LR + +P E D + A+AT SHPVW+
Sbjct: 99 EAVEIAKRRGHKGIAGMVNGVLRSI----QREGVPSVD-EIKDPVERLAIAT--SHPVWL 151
Query: 234 VRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKVPHELSLHLDE 293
V+ WT G E A K+ N P + R N K +T + + L + + D+
Sbjct: 152 VQEWTAEYGLETAEKMCEVNMLPPVPTARVNVDK-ITVEEAITLLASEGIEAKRGDLSDD 210
Query: 294 FIRVKTGLQNVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMAS 353
I+++ G NV K+G ++QDES+ LV ++P G I+D CAAPGGKT ++A
Sbjct: 211 AIQIEKG--NVAHTDAFKKGFLSIQDESSMLVARALEPDEGDVILDSCAAPGGKTTHIAE 268
Query: 354 CLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN-STVKCDKVLLDA 412
L G G V ++D++ ++R++ + A+ + +V T D R ++ + DK+L+DA
Sbjct: 269 RLKGTGQVMSLDLHAHKVRLIKQQAERLGLENV-ETKALDARKVQEHFANETFDKILVDA 327
Query: 413 PCSGLGVLSKRADLRWNRRLEDMEELKILQDELLD 447
PCSG GV+ ++ D++ + D E L ++Q +L+
Sbjct: 328 PCSGFGVIRRKPDIKLGKDKGDSERLSMIQFAILE 362
>TIGR_CMR|BA_4003 [details] [associations]
symbol:BA_4003 "sun protein" species:198094 "Bacillus
anthracis str. Ames" [GO:0008150 "biological_process" evidence=ND]
[GO:0008173 "RNA methyltransferase activity" evidence=ISS]
InterPro:IPR004573 InterPro:IPR006027 InterPro:IPR018314
Pfam:PF01029 PROSITE:PS01153 Pfam:PF01189 GO:GO:0005737
GO:GO:0006355 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 GO:GO:0031167 GO:GO:0008649
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
Gene3D:1.10.940.10 SUPFAM:SSF48013 HOGENOM:HOG000037300 KO:K03500
TIGRFAMs:TIGR00563 HSSP:O50082 OMA:TSHPEWL RefSeq:NP_846245.1
RefSeq:YP_020643.1 RefSeq:YP_029967.1 ProteinModelPortal:Q81WH3
DNASU:1086737 EnsemblBacteria:EBBACT00000011480
EnsemblBacteria:EBBACT00000014895 EnsemblBacteria:EBBACT00000021944
GeneID:1086737 GeneID:2815784 GeneID:2852994 KEGG:ban:BA_4003
KEGG:bar:GBAA_4003 KEGG:bat:BAS3716 ProtClustDB:PRK14902
BioCyc:BANT260799:GJAJ-3774-MONOMER
BioCyc:BANT261594:GJ7F-3891-MONOMER Uniprot:Q81WH3
Length = 444
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 106/335 (31%), Positives = 177/335 (52%)
Query: 115 VTDIVGGTIRWRRYLDHLICLLCHDEKTFSSMEPLLLQILRIGFYEIVKLD-MPPYAVVD 173
+T+IV GTI+ R LD+ + + +E + +LR+ Y+++ LD +P A +
Sbjct: 44 LTEIVYGTIQRRDTLDYYLQPFLKKK-----VEAWVRVLLRLSLYQMIYLDRVPERAAIH 98
Query: 174 ENVRLAKVALRPGAGNLVNGILRKLVLLKDNNSLPLPKLEGNDRAQARALATIYSHPVWM 233
E V +AK G +VNG+LR + +P E D + A+AT SHPVW+
Sbjct: 99 EAVEIAKRRGHKGIAGMVNGVLRSI----QREGVPSVD-EIKDPVERLAIAT--SHPVWL 151
Query: 234 VRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKVPHELSLHLDE 293
V+ WT G E A K+ N P + R N K +T + + L + + D+
Sbjct: 152 VQEWTAEYGLETAEKMCEVNMLPPVPTARVNVDK-ITVEEAITLLASEGIEAKRGDLSDD 210
Query: 294 FIRVKTGLQNVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMAS 353
I+++ G NV K+G ++QDES+ LV ++P G I+D CAAPGGKT ++A
Sbjct: 211 AIQIEKG--NVAHTDAFKKGFLSIQDESSMLVARALEPDEGDVILDSCAAPGGKTTHIAE 268
Query: 354 CLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN-STVKCDKVLLDA 412
L G G V ++D++ ++R++ + A+ + +V T D R ++ + DK+L+DA
Sbjct: 269 RLKGTGQVMSLDLHAHKVRLIKQQAERLGLENV-ETKALDARKVQEHFANETFDKILVDA 327
Query: 413 PCSGLGVLSKRADLRWNRRLEDMEELKILQDELLD 447
PCSG GV+ ++ D++ + D E L ++Q +L+
Sbjct: 328 PCSGFGVIRRKPDIKLGKDKGDSERLSMIQFAILE 362
>TIGR_CMR|GSU_3373 [details] [associations]
symbol:GSU_3373 "Sun protein" species:243231 "Geobacter
sulfurreducens PCA" [GO:0000154 "rRNA modification" evidence=ISS]
[GO:0008649 "rRNA methyltransferase activity" evidence=ISS]
InterPro:IPR004573 InterPro:IPR006027 InterPro:IPR018314
Pfam:PF01029 PROSITE:PS01153 Pfam:PF01189 GO:GO:0005737
GO:GO:0006355 GO:GO:0003723 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0031167 GO:GO:0008649 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 Gene3D:1.10.940.10 SUPFAM:SSF48013
HOGENOM:HOG000037300 KO:K03500 TIGRFAMs:TIGR00563 OMA:TSHPEWL
RefSeq:NP_954413.1 ProteinModelPortal:Q746Z4 GeneID:2686993
KEGG:gsu:GSU3373 PATRIC:22029601 ProtClustDB:CLSK829253
BioCyc:GSUL243231:GH27-3332-MONOMER Uniprot:Q746Z4
Length = 448
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 114/339 (33%), Positives = 178/339 (52%)
Query: 115 VTDIVGGTIRWRRYLDHLICLLCHDEKTFSSMEPLLLQILRIGFYEIVKLD-MPPYAVVD 173
+T++V G +R LD+L+ L C + +E +L +LR+G Y+I LD +P A V+
Sbjct: 47 LTELVYGVLRRTATLDYLVDLFCATRA--AKLERSVLILLRLGLYQIFFLDRIPVSAAVN 104
Query: 174 ENVRLAKVALRPGAGNLVNGILRKLVLLKDNNSLPLPKLEGNDRAQARALATIYSHPVWM 233
E V LA+ P A LVN +LR+ ++ +S+ P R A LA +SHP W+
Sbjct: 105 ETVTLAREK-SPRASGLVNAVLRRSD--RERSSIAWPD---RVRDPAGYLALRHSHPRWI 158
Query: 234 VRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKVPHELSLHLDE 293
V W LG EEA L + P +LR N+ + A L + L E + H
Sbjct: 159 VEGWIAQLGFEEAEALAEVMAAPPPLTLRVNTLRTSREAYLEL-LREAGTEAEPTRHSPH 217
Query: 294 FIRVKTGLQNVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMAS 353
IR+ + G EGL VQDES+ L +++P+ G+ ++D CA+PGGK ++A
Sbjct: 218 GIRILSRTAVPALPGF-GEGLVIVQDESSQLASLLLEPRSGERVLDACASPGGKATHLAQ 276
Query: 354 CLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAP 413
++ +G V A D+++ +L + E A+ + +IR AD R N+ D++L+DAP
Sbjct: 277 IMADKGEVIAWDVSEKKLSPIAENARRLGIG-IIRPAMADARNPEQNAA-PFDRILVDAP 334
Query: 414 CSGLGVLSKRADLRWNRRLEDMEELKILQDELL-DAASL 451
CS LGVL + + +W + +D+ L Q +L AASL
Sbjct: 335 CSALGVLRRTPEGKWWKTPDDVARLAQSQCRILAGAASL 373
>TIGR_CMR|CPS_0018 [details] [associations]
symbol:CPS_0018 "sun protein" species:167879 "Colwellia
psychrerythraea 34H" [GO:0000154 "rRNA modification" evidence=ISS]
[GO:0008649 "rRNA methyltransferase activity" evidence=ISS]
InterPro:IPR004573 InterPro:IPR006027 InterPro:IPR018314
Pfam:PF01029 PROSITE:PS01153 Pfam:PF01189 GO:GO:0005737
GO:GO:0006355 GO:GO:0003723 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0031167 GO:GO:0008649 eggNOG:COG0144 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 Gene3D:1.10.940.10
SUPFAM:SSF48013 HOGENOM:HOG000037300 KO:K03500 OMA:KPPMWLR
TIGRFAMs:TIGR00563 RefSeq:YP_266800.1 ProteinModelPortal:Q48AT0
STRING:Q48AT0 GeneID:3518998 KEGG:cps:CPS_0018 PATRIC:21463471
BioCyc:CPSY167879:GI48-135-MONOMER Uniprot:Q48AT0
Length = 440
Score = 320 (117.7 bits), Expect = 1.3e-28, P = 1.3e-28
Identities = 95/335 (28%), Positives = 166/335 (49%)
Query: 117 DIVGGTIRWRRYLDHLICLLCHDEKTFSSMEPLLLQILRIGFYEIVKLDMPPYAVVDENV 176
+I G +R+ L++ + L +K + + +L +G Y+I + +P +A V E V
Sbjct: 44 EICYGVLRYLPELENDVSQLV--QKPIKGKQRVFHFLLLVGVYQIRYMRIPDHAAVSETV 101
Query: 177 RLAKVALRPGAGNLVNGILRKLVLLKDNNSLPLPKLEGNDRAQARALATIYSHPVWMVRR 236
K LVN +LR + + + + K D+ + Y+HP W +++
Sbjct: 102 AATKTLKNDHMKGLVNAVLRGFLRALEAENKQVNK---TDKKIPDPIK--YNHPGWFIKK 156
Query: 237 WTK-YLGQEEAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKVPHELSLHLD--- 292
+ Y Q +AI + N P LR N + + Q L + E++ H++
Sbjct: 157 IQQAYSDQWQAI--LDANQQKPPMWLRVNQQHHTSEQ---YQALLEEAEIEIA-HVEPNS 210
Query: 293 EFIRVKTGLQNVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMA 352
+ I + L +V + +G ++QD +A ++D QP ++DCCAAPGGKT ++
Sbjct: 211 QAIELAKPL-DVAKLPGFDDGWVSIQDGAAQQAARLLDCQPNDIVLDCCAAPGGKTCHII 269
Query: 353 SCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDA 412
+ AIDI +GRL ++E L ++N I AD T S + D++LLDA
Sbjct: 270 EQTPDIASMTAIDIEEGRLTRVHEN--LDRLNLTANVITADAATQNWWSGEQFDRILLDA 327
Query: 413 PCSGLGVLSKRADLRWNRRLEDMEELKILQDELLD 447
PCSG GV+ + D++W R+ +D+++L +LQ ++LD
Sbjct: 328 PCSGTGVIRRHPDIKWLRKADDIDKLVVLQQQILD 362
>UNIPROTKB|Q9KVU5 [details] [associations]
symbol:rsmB "Ribosomal RNA small subunit methyltransferase
B" species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR004573
InterPro:IPR006027 InterPro:IPR018314 Pfam:PF01029 PROSITE:PS01153
Pfam:PF01189 GO:GO:0005737 GO:GO:0006355 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0031167 GO:GO:0008649
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
Gene3D:1.10.940.10 SUPFAM:SSF48013 KO:K03500 OMA:KPPMWLR
ProtClustDB:PRK10901 TIGRFAMs:TIGR00563 PIR:G82372
RefSeq:NP_229703.1 ProteinModelPortal:Q9KVU5 SMR:Q9KVU5
PRIDE:Q9KVU5 DNASU:2614440 GeneID:2614440 KEGG:vch:VC0044
PATRIC:20079136 Uniprot:Q9KVU5
Length = 434
Score = 312 (114.9 bits), Expect = 4.0e-27, P = 4.0e-27
Identities = 97/302 (32%), Positives = 157/302 (51%)
Query: 153 ILRIGFYEIVKLDMPPYAVVDENVRLAKVALRPGAGNLVNGILRKLVLLKDNNSLPLPKL 212
++ +G Y++ + +P +A V E V A+ P L+N +LR +D
Sbjct: 84 LILVGLYQLSFMRIPAHAAVGETVEGAQDLKGPRLRGLINAVLRNYQ--RDQ-------- 133
Query: 213 EGNDRAQARAL-ATIYSHPVWMVRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRKGVTR 271
EG D AQA + A Y HP W+++ K E+ +++ NNS LR N + TR
Sbjct: 134 EGLD-AQATSHDAGRYGHPGWLLKL-LKESYPEQWQQIVEANNSKAPMWLRVNHQHH-TR 190
Query: 272 AD---LVMQLNLLKVPHELSLHLDEFIRVKTGLQNVIQAGLLKEGLCAVQDESAGLVVAV 328
A+ L+ Q ++ PH + ++ + ++T +V Q EG +VQD +A L +
Sbjct: 191 AEYQALLEQAGIVTTPHAQA---EDALCLETPC-DVHQLPGFAEGWVSVQDAAAQLALTY 246
Query: 329 VDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIR 388
+ PQ G+ I+DCCAAPGGKT ++ + + V AID ++ RL+ + E L ++ +
Sbjct: 247 LAPQAGELILDCCAAPGGKTAHILE-RTPESQVVAIDCDETRLKRVREN--LQRLELTAQ 303
Query: 389 TIHADLRTFADN--STVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELL 446
I D R + + D++LLDAPCS GV+ + D++W RR +D+ L LQ E+L
Sbjct: 304 VICGDAR-YPQQWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRRADDIAALAELQREIL 362
Query: 447 DA 448
DA
Sbjct: 363 DA 364
>TIGR_CMR|VC_0044 [details] [associations]
symbol:VC_0044 "sun protein" species:686 "Vibrio cholerae
O1 biovar El Tor" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR004573 InterPro:IPR006027 InterPro:IPR018314
Pfam:PF01029 PROSITE:PS01153 Pfam:PF01189 GO:GO:0005737
GO:GO:0006355 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003723
GO:GO:0031167 GO:GO:0008649 eggNOG:COG0144 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 Gene3D:1.10.940.10
SUPFAM:SSF48013 KO:K03500 OMA:KPPMWLR ProtClustDB:PRK10901
TIGRFAMs:TIGR00563 PIR:G82372 RefSeq:NP_229703.1
ProteinModelPortal:Q9KVU5 SMR:Q9KVU5 PRIDE:Q9KVU5 DNASU:2614440
GeneID:2614440 KEGG:vch:VC0044 PATRIC:20079136 Uniprot:Q9KVU5
Length = 434
Score = 312 (114.9 bits), Expect = 4.0e-27, P = 4.0e-27
Identities = 97/302 (32%), Positives = 157/302 (51%)
Query: 153 ILRIGFYEIVKLDMPPYAVVDENVRLAKVALRPGAGNLVNGILRKLVLLKDNNSLPLPKL 212
++ +G Y++ + +P +A V E V A+ P L+N +LR +D
Sbjct: 84 LILVGLYQLSFMRIPAHAAVGETVEGAQDLKGPRLRGLINAVLRNYQ--RDQ-------- 133
Query: 213 EGNDRAQARAL-ATIYSHPVWMVRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRKGVTR 271
EG D AQA + A Y HP W+++ K E+ +++ NNS LR N + TR
Sbjct: 134 EGLD-AQATSHDAGRYGHPGWLLKL-LKESYPEQWQQIVEANNSKAPMWLRVNHQHH-TR 190
Query: 272 AD---LVMQLNLLKVPHELSLHLDEFIRVKTGLQNVIQAGLLKEGLCAVQDESAGLVVAV 328
A+ L+ Q ++ PH + ++ + ++T +V Q EG +VQD +A L +
Sbjct: 191 AEYQALLEQAGIVTTPHAQA---EDALCLETPC-DVHQLPGFAEGWVSVQDAAAQLALTY 246
Query: 329 VDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIR 388
+ PQ G+ I+DCCAAPGGKT ++ + + V AID ++ RL+ + E L ++ +
Sbjct: 247 LAPQAGELILDCCAAPGGKTAHILE-RTPESQVVAIDCDETRLKRVREN--LQRLELTAQ 303
Query: 389 TIHADLRTFADN--STVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELL 446
I D R + + D++LLDAPCS GV+ + D++W RR +D+ L LQ E+L
Sbjct: 304 VICGDAR-YPQQWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRRADDIAALAELQREIL 362
Query: 447 DA 448
DA
Sbjct: 363 DA 364
>UNIPROTKB|P36929 [details] [associations]
symbol:rsmB "16S rRNA m5C967 methyltransferase"
species:83333 "Escherichia coli K-12" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0070475 "rRNA base
methylation" evidence=IMP] [GO:0009383 "rRNA
(cytosine-C5-)-methyltransferase activity" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] HAMAP:MF_01856 InterPro:IPR004573 InterPro:IPR006027
InterPro:IPR018314 InterPro:IPR023541 Pfam:PF01029 PROSITE:PS01153
Pfam:PF01189 GO:GO:0005737 GO:GO:0006355 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR EMBL:U18997
GO:GO:0003723 EMBL:X77091 EMBL:Y10307 GO:GO:0070475 EMBL:X52114
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
Gene3D:1.10.940.10 SUPFAM:SSF48013 GO:GO:0009383
HOGENOM:HOG000037300 KO:K03500 OMA:KPPMWLR ProtClustDB:PRK10901
TIGRFAMs:TIGR00563 PIR:D65121 RefSeq:NP_417747.1 RefSeq:YP_492144.1
PDB:1J4F PDB:1SQF PDB:1SQG PDBsum:1J4F PDBsum:1SQF PDBsum:1SQG
ProteinModelPortal:P36929 SMR:P36929 DIP:DIP-10946N IntAct:P36929
PRIDE:P36929 EnsemblBacteria:EBESCT00000000406
EnsemblBacteria:EBESCT00000016126 GeneID:12934442 GeneID:947789
KEGG:ecj:Y75_p3888 KEGG:eco:b3289 PATRIC:32122010 EchoBASE:EB2082
EcoGene:EG12163 BioCyc:EcoCyc:EG12163-MONOMER
BioCyc:ECOL316407:JW3250-MONOMER BioCyc:MetaCyc:EG12163-MONOMER
EvolutionaryTrace:P36929 Genevestigator:P36929 Uniprot:P36929
Length = 429
Score = 300 (110.7 bits), Expect = 2.8e-25, P = 2.8e-25
Identities = 94/301 (31%), Positives = 153/301 (50%)
Query: 153 ILRIGFYEIVKLDMPPYAVVDENVRLAKVALRPGAGNLVNGILRKLVLLKDNNSLPLPKL 212
++ +G Y+++ +PP+A + E V A RP L+NG+LR+ + L L +
Sbjct: 80 LIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQ--RQQEEL-LAEF 136
Query: 213 EGNDRAQARALATIYSHPVWMVRRWTK-YLGQEEAIKLMVWNNSDPSFSLRANSRKGVTR 271
+D AR Y HP W+++R K Y Q ++I + NN P LR N R +R
Sbjct: 137 NASD---AR-----YLHPSWLLKRLQKAYPEQWQSI--VEANNQRPPMWLRIN-RTHHSR 185
Query: 272 AD---LVMQLNLLKVPHELSLHLDEFIRVKTGLQNVIQAGLLKEGLCAVQDESAGLVVAV 328
L+ + + PH + +R++T G ++G VQD SA +
Sbjct: 186 DSWLALLDEAGMKGFPHA---DYPDAVRLETPAPVHALPGF-EDGWVTVQDASAQGCMTW 241
Query: 329 VDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIR 388
+ PQ G+ I+D CAAPGGKT ++ ++ + V A+DI++ RL + + K + + ++
Sbjct: 242 LAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVK 300
Query: 389 TIHADLRTFAD-NSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLD 447
D R + + D++LLDAPCS GV+ + D++W RR D+ EL LQ E+LD
Sbjct: 301 --QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILD 358
Query: 448 A 448
A
Sbjct: 359 A 359
>TIGR_CMR|CBU_1915 [details] [associations]
symbol:CBU_1915 "Sun protein" species:227377 "Coxiella
burnetii RSA 493" [GO:0000154 "rRNA modification" evidence=ISS]
[GO:0008649 "rRNA methyltransferase activity" evidence=ISS]
InterPro:IPR004573 InterPro:IPR006027 InterPro:IPR018314
Pfam:PF01029 PROSITE:PS01153 Pfam:PF01189 GO:GO:0005737
GO:GO:0006355 GO:GO:0003723 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0031167 GO:GO:0008649 eggNOG:COG0144 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 Gene3D:1.10.940.10
SUPFAM:SSF48013 EMBL:U10529 PIR:I40649 RefSeq:NP_820892.1
ProteinModelPortal:P45679 GeneID:1209828 KEGG:cbu:CBU_1915
PATRIC:17932565 HOGENOM:HOG000037300 KO:K03500 OMA:KPPMWLR
ProtClustDB:PRK10901 BioCyc:CBUR227377:GJ7S-1889-MONOMER
TIGRFAMs:TIGR00563 Uniprot:P45679
Length = 430
Score = 282 (104.3 bits), Expect = 8.0e-23, P = 8.0e-23
Identities = 90/340 (26%), Positives = 164/340 (48%)
Query: 115 VTDIVGGTIRWRRYLDHLICLLCHDEKTFSSMEPLLLQILRIGFYEIVKLDMPPYAVVDE 174
+ ++ GT+RW L + L H + + ++ GFY++ L++P + +V++
Sbjct: 35 IQELCYGTLRWYFKLKLIAEKLLH--APLRDKDHDIFCLILTGFYQLNYLNIPTHTIVNQ 92
Query: 175 NVRLAKVALRPGAGNLVNGILRKLVLLKDNNSLPLPK-LEGNDRAQARALATIYSHPVWM 233
V A++ +P A L+N +LR+ + KD K +EG Y+HP+W
Sbjct: 93 TVGAAEILKKPWAKGLINKLLRRFIAEKDELLTFTEKTIEGQ-----------YAHPLWF 141
Query: 234 VRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKVPHELSLHLDE 293
++ K + +++ NN+ P +LR N K ++R + L +L + + LD
Sbjct: 142 IQH-IKKAWPDHWESILIANNARPPMTLRVNLTK-ISRE---IYLEMLDQKNISAKPLD- 195
Query: 294 FIRVKTGLQ---NVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLY 350
F+ L+ +V Q EG C +QD + ++ + Q+++D CAAPG KT +
Sbjct: 196 FLPAAIQLEKPCSVHQLPGFNEGYCYIQDAAGQFAAYLLKLENNQTVLDACAAPGSKTSH 255
Query: 351 MASCLSGQGLVYAIDINKGRL-RILNETAKLHQVNSVIRTIHADLRTFADNSTVKC-DKV 408
+ + AID NK RL RI +L ++ + AD+ S+ + D++
Sbjct: 256 ILEVNPHLKTLVAIDNNKQRLNRIKENITRLGLRQEHLQCLLADVSQIDQWSSGELFDRI 315
Query: 409 LLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDA 448
LLDAPCS GV+ + D++ R+ D+ + + +LL+A
Sbjct: 316 LLDAPCSATGVIRRHPDIKLLRQPGDISQYHQKKLQLLNA 355
>TIGR_CMR|SO_2215 [details] [associations]
symbol:SO_2215 "sun protein, putative" species:211586
"Shewanella oneidensis MR-1" [GO:0001510 "RNA methylation"
evidence=ISS] [GO:0016434 "rRNA (cytosine) methyltransferase
activity" evidence=ISS] Pfam:PF01189 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008168 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 KO:K03500 HOGENOM:HOG000037301
RefSeq:NP_717812.1 ProteinModelPortal:Q8EEZ4 GeneID:1169952
KEGG:son:SO_2215 PATRIC:23524061 OMA:GWFEQQD ProtClustDB:CLSK906636
Uniprot:Q8EEZ4
Length = 404
Score = 265 (98.3 bits), Expect = 6.6e-21, P = 6.6e-21
Identities = 77/259 (29%), Positives = 126/259 (48%)
Query: 194 ILRKLVLLKDNNSLPLPKLEGNDRA-QARALATIYSH-PVWMVRRWTKYLGQEEAIKLMV 251
+ +L L K SLP+ + R QA+ ++ P W+ + LG +
Sbjct: 87 LFHELELPKMQYSLPVDPDDLVARIEQAKTNPVLWDGCPEWLDTMGREQLGASWEKERAA 146
Query: 252 WNNSDPSFSLRANSRKGVTRADLVMQLNLLKVPHELSLHLDEFIRVKTGLQNVIQAGLLK 311
N F LR N K V+R +LV +L V ++ +D + V T + + K
Sbjct: 147 LNRPPKRF-LRVNGLK-VSRDELVQKLATEFVSTQVVDSVDSALEV-TSDSALFRTNSFK 203
Query: 312 EGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRL 371
EGL QD + V A +D +PG ++D CA GGKTL++A+ + G+G + A+D+ + +L
Sbjct: 204 EGLFEQQDAGSQRVAAALDAKPGMRVIDACAGAGGKTLHIAAQMQGKGRLLAMDVEQWKL 263
Query: 372 RILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRR 431
L E A+ + +++ + +T + D+VLLD PCSGLGVL + D +W
Sbjct: 264 DNLKERARRNGAHNIETRLIVGSKTIK-RLKLTADRVLLDVPCSGLGVLKRNPDAKWRDT 322
Query: 432 LEDMEELKILQDELLDAAS 450
+ + L LQ +L + S
Sbjct: 323 ADRLPVLMELQKHILSSYS 341
>UNIPROTKB|P71675 [details] [associations]
symbol:MT1451 "Putative methyltransferase Rv1407/MT1451"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] InterPro:IPR006027 InterPro:IPR018314 Pfam:PF01029
PROSITE:PS01153 Pfam:PF01189 GO:GO:0005618 GO:GO:0006355
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842576 GO:GO:0003723 GO:GO:0008168 eggNOG:COG0144
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
Gene3D:1.10.940.10 SUPFAM:SSF48013 KO:K03500 PIR:D70901
RefSeq:NP_215923.1 RefSeq:NP_335902.1 RefSeq:YP_006514787.1
ProteinModelPortal:P71675 SMR:P71675 PRIDE:P71675
EnsemblBacteria:EBMYCT00000002571 EnsemblBacteria:EBMYCT00000069025
GeneID:13319996 GeneID:886720 GeneID:924521 KEGG:mtc:MT1451
KEGG:mtu:Rv1407 KEGG:mtv:RVBD_1407 PATRIC:18124960
TubercuList:Rv1407 HOGENOM:HOG000037302 OMA:TSHPEWL
ProtClustDB:CLSK871930 Uniprot:P71675
Length = 457
Score = 261 (96.9 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 98/346 (28%), Positives = 163/346 (47%)
Query: 116 TDIVGGTIRWRRYLDHLICLLCHDEKTFSSMEPLLLQILRIGFYEIVKLDMPPYAVVDEN 175
T++ GT R R LD +I E++ +++P+LL +LR+G Y++++ + +A V
Sbjct: 56 TELTYGTCRARGLLDAVIGAAA--ERSPQAIDPVLLDLLRLGTYQLLRTRVDAHAAVSTT 113
Query: 176 VRLAKVALRPGAGNLVNGILRKLVLLKDNNSLP---LPKLEGNDRAQARALATIYSHPVW 232
V A + VNG+LR + +D S P + + A A +++HP W
Sbjct: 114 VEQAGIEFDSARAGFVNGVLRTIAG-RDERSWVGELAPDAQNDPIGHA---AFVHAHPRW 169
Query: 233 MVRRWTKYLGQE--EAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKVPHELSLH 290
+ + + LG E ++ ++ P+ L A R GV A + + V + +
Sbjct: 170 IAQAFADALGAAVGELEAVLASDDERPAVHLAA--RPGVLTAGELARA----VRGTVGRY 223
Query: 291 LDEFIRVKTGLQNVIQAGLLKEGLCAVQDESAGLV-----VAVVDPQPGQSIVDCCAAPG 345
+ + G + +++G VQDE + LV +A VD G+ + D CA PG
Sbjct: 224 SPFAVYLPRGDPGRLAP--VRDGQALVQDEGSQLVARALTLAPVDGDTGRWL-DLCAGPG 280
Query: 346 GKTLYMASC-LSGQGLVYAIDINKGRLRILNETAKLHQVNSV-IRTIHADLRTFADNSTV 403
GKT +A L V A++ + R ++ + + V + + H DL D
Sbjct: 281 GKTALLAGLGLQCAARVTAVEPSPHRADLVAQNTRGLPVELLRVDGRHTDL----DPGF- 335
Query: 404 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAA 449
D+VL+DAPC+GLG L +R + RW R+ D+ L LQ ELL AA
Sbjct: 336 --DRVLVDAPCTGLGALRRRPEARWRRQPADVAALAKLQRELLSAA 379
>TIGR_CMR|SO_0030 [details] [associations]
symbol:SO_0030 "sun protein" species:211586 "Shewanella
oneidensis MR-1" [GO:0001510 "RNA methylation" evidence=ISS]
[GO:0016434 "rRNA (cytosine) methyltransferase activity"
evidence=ISS] InterPro:IPR004573 InterPro:IPR006027
InterPro:IPR018314 Pfam:PF01029 PROSITE:PS01153 Pfam:PF01189
GO:GO:0005737 GO:GO:0006355 GO:GO:0003723 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
Gene3D:1.10.940.10 SUPFAM:SSF48013 HOGENOM:HOG000037300 KO:K03500
OMA:KPPMWLR ProtClustDB:PRK10901 TIGRFAMs:TIGR00563
RefSeq:NP_715672.1 ProteinModelPortal:Q8EKR0 SMR:Q8EKR0
GeneID:1167928 KEGG:son:SO_0030 PATRIC:23519751 Uniprot:Q8EKR0
Length = 428
Score = 247 (92.0 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 68/224 (30%), Positives = 115/224 (51%)
Query: 227 YSHPVWMVRRW-TKYLGQEEAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKVPH 285
Y+ P W+++R T Y G + I + ++ P LR N+R +R + + L+ L++
Sbjct: 138 YNTPGWLIKRLKTAYPGNWQEI--IQQSHERPPMWLR-NNRLSQSRDEYLAALDKLEIDA 194
Query: 286 ELSLHLDEFIRVKTGLQNVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPG 345
L D + ++V L EG +VQD +A ++ PQ + I+D CAAPG
Sbjct: 195 SAGLSDDAILLAAP--KDVATLPLFLEGAASVQDGAAQWAATLLAPQANELILDACAAPG 252
Query: 346 GKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN--STV 403
GK+ ++ L+ A+D + RL + + L +++ IH D D+
Sbjct: 253 GKSCHLLELEPSIKLI-AVDFDAKRLERVQQN--LDRLSLKAEVIHGDAANI-DSWWQGE 308
Query: 404 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLD 447
+ D++LLDAPCS GV+ + D++W R+ D+EEL LQ ++LD
Sbjct: 309 QFDRILLDAPCSATGVIRRHPDIKWLRKNHDIEELAELQRQILD 352
>MGI|MGI:107891 [details] [associations]
symbol:Nop2 "NOP2 nucleolar protein" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0008757 "S-adenosylmethionine-dependent
methyltransferase activity" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
InterPro:IPR011023 InterPro:IPR018314 InterPro:IPR023273
PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189 MGI:MGI:107891
GO:GO:0005730 GO:GO:0003723 GO:GO:0006364 GO:GO:0008757
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000224258 HOVERGEN:HBG082043 ChiTaRS:NOP2
InterPro:IPR012586 Pfam:PF08062 TIGRFAMs:TIGR00446 EMBL:BC007151
EMBL:AK154006 IPI:IPI00311453 PIR:A48998 UniGene:Mm.29203
HSSP:Q96P11 ProteinModelPortal:Q922K7 SMR:Q922K7 STRING:Q922K7
PhosphoSite:Q922K7 PaxDb:Q922K7 PRIDE:Q922K7 UCSC:uc009dtn.2
InParanoid:Q922K7 OrthoDB:EOG4RJG1H Genevestigator:Q922K7
Uniprot:Q922K7
Length = 793
Score = 239 (89.2 bits), Expect = 5.8e-17, P = 5.8e-17
Identities = 81/250 (32%), Positives = 125/250 (50%)
Query: 213 EGNDRAQ-----ARALATIYSHPVWMVRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRK 267
EG RA+ + LAT YS+ +++ + + E I+ + N +LR N+ K
Sbjct: 244 EGRSRAEYLSRLQKDLATYYSYGDFLLSKLMELFPLSELIEFLEANEVPRPITLRTNTLK 303
Query: 268 GVTRADLVMQLNLLKVPHELSLHLDEFIR-VKTGL---QNVIQAGLLKEGLCA---VQDE 320
R DL QL + + ++LD + K+GL + + G E L +Q
Sbjct: 304 -TRRRDLA-QLLINR-----GVNLDPLGKWSKSGLVVYDSSVPIGATPEYLAGHYMLQGA 356
Query: 321 SAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLR-ILNETAK 379
S+ L V + PQ + I+D C APGGKT Y+A + G++ A D N RL+ ++ +
Sbjct: 357 SSMLPVMALAPQEHERILDMCCAPGGKTSYIAQLMKNTGVILANDANADRLKSVVGNLHR 416
Query: 380 LHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELK 439
L N++I H D R F D+VLLDAPCSG GV+SK ++ N+ +D++
Sbjct: 417 LGVTNTIIS--HYDGRQFP-KVVGGFDRVLLDAPCSGTGVISKDPAVKTNKDEKDIQRCA 473
Query: 440 ILQDELLDAA 449
LQ ELL +A
Sbjct: 474 HLQKELLLSA 483
>DICTYBASE|DDB_G0281685 [details] [associations]
symbol:nol1 "NOL1/NOP2/Sun family protein"
species:44689 "Dictyostelium discoideum" [GO:0032259 "methylation"
evidence=IEA] [GO:0008757 "S-adenosylmethionine-dependent
methyltransferase activity" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR011023 InterPro:IPR023273 PRINTS:PR02012
dictyBase:DDB_G0281685 Pfam:PF01189 GenomeReviews:CM000152_GR
GO:GO:0003723 EMBL:AAFI02000042 GO:GO:0032259 GO:GO:0006364
GO:GO:0008757 eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 KO:K14835 TIGRFAMs:TIGR00446 RefSeq:XP_640577.1
ProteinModelPortal:Q54TL4 STRING:Q54TL4 EnsemblProtists:DDB0237575
GeneID:8623185 KEGG:ddi:DDB_G0281685 InParanoid:Q54TL4 OMA:IEYLAGH
ProtClustDB:CLSZ2846781 Uniprot:Q54TL4
Length = 647
Score = 233 (87.1 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 69/233 (29%), Positives = 116/233 (49%)
Query: 223 LATIYSHPVWMVRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLK 282
+ T + + W+ + K EA++ N + ++RAN+ K V R DL L + +
Sbjct: 249 ICTYFGYSQWLAEVFLKIFNASEALEFFEANETHRPLTIRANTLK-VRRKDLAEAL-IAR 306
Query: 283 VPHELSLHLDEFIRVKTGL---QNVIQAGLLKEGLCAV---QDESAGLVVAVVDPQPGQS 336
+HL+ + GL + G E L Q S+ L V + PQP +
Sbjct: 307 -----GVHLEPIKWSQVGLTIYDTQVAIGATPEYLAGQYIQQSASSFLPVLALAPQPNER 361
Query: 337 IVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQV---NSVIRTIHAD 393
++D CA+PGGKT Y+A+ + G + A D+NK R++ L A +H++ N ++ + D
Sbjct: 362 VLDMCASPGGKTTYIAAMMKNTGTLVANDVNKDRIKSL--VANIHRLGVKNCMVSNL--D 417
Query: 394 LRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELL 446
R + + D+VL+DAPC GLGV+SK ++ ++ +D+ Q ELL
Sbjct: 418 GRQYPSVLS-GFDRVLVDAPCVGLGVISKDPQIKISKSEQDVITCTHTQKELL 469
>RGD|1304616 [details] [associations]
symbol:Nop2 "NOP2 nucleolar protein" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=IEA] InterPro:IPR011023 InterPro:IPR018314
InterPro:IPR023273 PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189
RGD:1304616 GO:GO:0005730 GO:GO:0003723 GO:GO:0032259 GO:GO:0006364
GO:GO:0008757 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
TIGRFAMs:TIGR00446 OrthoDB:EOG4RJG1H GeneTree:ENSGT00660000095341
IPI:IPI00554155 PRIDE:D4ACW1 Ensembl:ENSRNOT00000024938
UCSC:RGD:1304616 Uniprot:D4ACW1
Length = 772
Score = 232 (86.7 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 87/305 (28%), Positives = 143/305 (46%)
Query: 154 LRIGFYEIVKLDMPPYAVVDENVRLAKVA-LRPGAGNLVNGILRKLVLLKDNNSLPLPKL 212
L+I E +PP D++ + + + ++V G+LR ++ +
Sbjct: 189 LQINVEEEEAFVLPPAGQTDQDTQTPDLQRVHKRIQDIV-GVLRDFGAQREEGR---SRT 244
Query: 213 EGNDRAQARALATIYSHPVWMVRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRKGVTRA 272
E + Q + LAT YS+ +++ + + E I+ + N +LR N+ K R
Sbjct: 245 EYLSQLQ-KDLATYYSYGDFLLSKLMELFPLSELIEFLEANEVPRPITLRTNTLK-TRRR 302
Query: 273 DLVMQLNLLKVPHELSLHLDEFIR-VKTGL---QNVIQAGLLKEGLCA---VQDESAGLV 325
DL L ++LD + K+GL + + G E L +Q S+ L
Sbjct: 303 DLAQALI------NRGVNLDPLGKWSKSGLVVYDSSVPIGATPEYLAGHYMLQGASSMLP 356
Query: 326 VAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLR-ILNETAKLHQVN 384
V + PQ + I+D C APGGKT Y+A + G++ A D N RL+ ++ +L N
Sbjct: 357 VMALAPQEHERILDMCCAPGGKTSYIAQLMKNTGVILANDANAERLKSVVGNLHRLGVTN 416
Query: 385 SVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDE 444
+++ H D R F D+VLLDAPCSG GV+SK ++ N+ +D++ LQ E
Sbjct: 417 TIVS--HYDGRQFP-KVVGGFDRVLLDAPCSGTGVISKDPAVKTNKDEKDIQRCAHLQKE 473
Query: 445 LLDAA 449
LL +A
Sbjct: 474 LLLSA 478
>UNIPROTKB|E2RCH6 [details] [associations]
symbol:NOP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008757 "S-adenosylmethionine-dependent
methyltransferase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR011023 InterPro:IPR018314 InterPro:IPR023273
PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189 GO:GO:0003723
GO:GO:0032259 GO:GO:0006364 GO:GO:0008757 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 OMA:DLQRVHK TIGRFAMs:TIGR00446
GeneTree:ENSGT00660000095341 EMBL:AAEX03015287
Ensembl:ENSCAFT00000023862 Uniprot:E2RCH6
Length = 826
Score = 229 (85.7 bits), Expect = 8.1e-16, P = 8.1e-16
Identities = 79/250 (31%), Positives = 120/250 (48%)
Query: 213 EGNDRAQ-----ARALATIYSHPVWMVRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRK 267
EG R++ + LAT YS+ +++ + E ++ + N +LR N+ K
Sbjct: 271 EGRSRSEYLHRLQKDLATYYSYGDFLLGKLMDLFPLSELVEFLEANEVPRPITLRTNTLK 330
Query: 268 GVTRADLVMQLNLLKVPHELSLHLDEFIR-VKTGL---QNVIQAGLLKE---GLCAVQDE 320
R DL L ++LD + KTGL + + G E G +Q
Sbjct: 331 -TRRRDLAQALI------NRGVNLDPLGKWSKTGLVVYDSSVPIGATPEYLAGYYMLQGA 383
Query: 321 SAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLR-ILNETAK 379
S+ L V + PQ + I+D C APGGKT Y+A + G++ A D N RL+ ++ +
Sbjct: 384 SSMLPVMALAPQEHERILDMCCAPGGKTSYIAQLMKNTGVILANDANAERLKSVVGNLHR 443
Query: 380 LHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELK 439
L N++I H D R F D+VLLDAPCSG GV+SK ++ N+ +D+
Sbjct: 444 LGVTNTIIS--HYDGRQFP-KVVGGFDRVLLDAPCSGTGVISKDPAVKTNKDEKDILRCA 500
Query: 440 ILQDELLDAA 449
LQ ELL +A
Sbjct: 501 HLQKELLLSA 510
>UNIPROTKB|F1N3G2 [details] [associations]
symbol:NOP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR011023
InterPro:IPR018314 InterPro:IPR023273 PRINTS:PR02012
PROSITE:PS01153 Pfam:PF01189 GO:GO:0005730 GO:GO:0003723
GO:GO:0032259 GO:GO:0006364 GO:GO:0008757 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 OMA:DLQRVHK TIGRFAMs:TIGR00446
GeneTree:ENSGT00660000095341 EMBL:DAAA02014463 IPI:IPI00717832
UniGene:Bt.53770 Ensembl:ENSBTAT00000019607 Uniprot:F1N3G2
Length = 820
Score = 228 (85.3 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 79/250 (31%), Positives = 120/250 (48%)
Query: 213 EGNDRAQ-----ARALATIYSHPVWMVRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRK 267
EG R++ + LAT YS+ +++ + E ++ + N +LR N+ K
Sbjct: 260 EGRSRSEYLQRLRKDLATYYSYGDFLLGKLMDLFPLSELVEFLEANEVPRPITLRTNTLK 319
Query: 268 GVTRADLVMQLNLLKVPHELSLHLDEFIR-VKTGL---QNVIQAGLLKEGLCA---VQDE 320
R DL L ++LD + KTGL + + G E L +Q
Sbjct: 320 -TRRRDLAQALI------NRGVNLDPLGKWSKTGLVVYDSSVPIGATPEYLAGHYMLQGA 372
Query: 321 SAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLR-ILNETAK 379
S+ L V + PQ + I+D C APGGKT Y+A + G++ A D N RL+ ++ +
Sbjct: 373 SSMLPVMALAPQEHERILDMCCAPGGKTSYIAQLMKNTGVILANDANAERLKSVVGNLHR 432
Query: 380 LHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELK 439
L N++I H D R F D+VLLDAPCSG GV+SK ++ N+ +D+
Sbjct: 433 LGVTNAIIS--HYDGRQFP-KVVGGFDRVLLDAPCSGTGVISKDPAVKTNKDEKDILRCA 489
Query: 440 ILQDELLDAA 449
LQ ELL +A
Sbjct: 490 HLQKELLLSA 499
>UNIPROTKB|P46087 [details] [associations]
symbol:NOP2 "Putative ribosomal RNA methyltransferase NOP2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008284 "positive regulation of cell proliferation"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR011023 InterPro:IPR018314
InterPro:IPR023273 PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189
GO:GO:0005730 GO:GO:0008284 GO:GO:0003723 GO:GO:0032259
GO:GO:0006364 EMBL:AC006064 GO:GO:0008757 eggNOG:COG0144
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 EMBL:M32110
EMBL:M33132 EMBL:X55504 EMBL:AK056208 EMBL:BC082985 EMBL:BC000656
EMBL:BC065257 EMBL:BC106072 EMBL:BC128183 EMBL:BC128184
IPI:IPI00294891 IPI:IPI00872909 PIR:A48168 RefSeq:NP_001028886.1
RefSeq:NP_001245237.1 RefSeq:NP_001245238.1 RefSeq:NP_001245239.1
RefSeq:NP_006161.2 UniGene:Hs.534334 ProteinModelPortal:P46087
SMR:P46087 IntAct:P46087 MINT:MINT-1137742 STRING:P46087
PhosphoSite:P46087 DMDM:146289861 SWISS-2DPAGE:P46087 PaxDb:P46087
PRIDE:P46087 Ensembl:ENST00000322166 Ensembl:ENST00000382421
Ensembl:ENST00000399466 Ensembl:ENST00000537442
Ensembl:ENST00000541778 Ensembl:ENST00000545200 GeneID:4839
KEGG:hsa:4839 UCSC:uc021qtw.1 CTD:4839 GeneCards:GC12M006666
HGNC:HGNC:7867 HPA:HPA040119 MIM:164031 neXtProt:NX_P46087
PharmGKB:PA164724026 HOGENOM:HOG000224258 HOVERGEN:HBG082043
KO:K14835 OMA:DLQRVHK ChiTaRS:NOP2 GenomeRNAi:4839 NextBio:18646
ArrayExpress:P46087 Bgee:P46087 CleanEx:HS_NOP2
Genevestigator:P46087 GermOnline:ENSG00000111641 InterPro:IPR012586
Pfam:PF08062 TIGRFAMs:TIGR00446 Uniprot:P46087
Length = 812
Score = 225 (84.3 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 79/250 (31%), Positives = 119/250 (47%)
Query: 213 EGNDRAQ-----ARALATIYSHPVWMVRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRK 267
EG R++ + LA YS+ +++ + E ++ + N +LR N+ K
Sbjct: 259 EGRSRSEYLNRLKKDLAIYYSYGDFLLGKLMDLFPLSELVEFLEANEVPRPVTLRTNTLK 318
Query: 268 GVTRADLVMQLNLLKVPHELSLHLDEFIR-VKTGL---QNVIQAGLLKEGLCA---VQDE 320
R DL L ++LD + KTGL + + G E L +Q
Sbjct: 319 -TRRRDLAQALI------NRGVNLDPLGKWSKTGLVVYDSSVPIGATPEYLAGHYMLQGA 371
Query: 321 SAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLR-ILNETAK 379
S+ L V + PQ + I+D C APGGKT YMA + G++ A D N RL+ ++ +
Sbjct: 372 SSMLPVMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVILANDANAERLKSVVGNLHR 431
Query: 380 LHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELK 439
L N++I H D R F D+VLLDAPCSG GV+SK ++ N+ +D+
Sbjct: 432 LGVTNTIIS--HYDGRQFP-KVVGGFDRVLLDAPCSGTGVISKDPAVKTNKDEKDILRCA 488
Query: 440 ILQDELLDAA 449
LQ ELL +A
Sbjct: 489 HLQKELLLSA 498
>UNIPROTKB|F1SLR6 [details] [associations]
symbol:NOP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR011023
InterPro:IPR018314 InterPro:IPR023273 PRINTS:PR02012
PROSITE:PS01153 Pfam:PF01189 GO:GO:0005730 GO:GO:0003723
GO:GO:0032259 GO:GO:0006364 GO:GO:0008757 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 CTD:4839 KO:K14835 OMA:DLQRVHK
TIGRFAMs:TIGR00446 GeneTree:ENSGT00660000095341 EMBL:CU914489
RefSeq:NP_001231175.1 UniGene:Ssc.5041 Ensembl:ENSSSCT00000000758
GeneID:100516080 KEGG:ssc:100516080 Uniprot:F1SLR6
Length = 821
Score = 223 (83.6 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 78/250 (31%), Positives = 119/250 (47%)
Query: 213 EGNDRAQ-----ARALATIYSHPVWMVRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRK 267
EG RA+ + LAT YS+ +++ + E ++ + N +LR N+ K
Sbjct: 258 EGRSRAEYLQRLRKDLATYYSYGDFLLGKLMDLFPLSELVEFLEANEVPRPITLRTNTLK 317
Query: 268 GVTRADLVMQLNLLKVPHELSLHLDEFIR-VKTGL---QNVIQAGLLKEGLCA---VQDE 320
R DL L ++LD + KTGL + + G E L +Q
Sbjct: 318 -TRRRDLAQALI------NRGVNLDPLGKWSKTGLVVYDSSVPIGATPEYLAGHYMLQGA 370
Query: 321 SAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLR-ILNETAK 379
S+ L V + PQ + I+D C APGGKT Y+A + G++ A D N RL+ ++ +
Sbjct: 371 SSMLPVMALAPQEHERILDMCCAPGGKTSYIAQLMKNTGVILANDANAERLKSVVGNLHR 430
Query: 380 LHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELK 439
L N++I D R F D+VLLDAPCSG G++SK ++ N+ +D+
Sbjct: 431 LGVTNTIISNY--DGRQFP-KVVGGFDRVLLDAPCSGTGIISKDPAVKTNKDEKDILRCA 487
Query: 440 ILQDELLDAA 449
LQ ELL +A
Sbjct: 488 HLQKELLLSA 497
>UNIPROTKB|F1NH85 [details] [associations]
symbol:Gga.5513 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=IEA] InterPro:IPR011023 InterPro:IPR018314
InterPro:IPR023273 PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189
GO:GO:0003723 GO:GO:0032259 GO:GO:0006364 GO:GO:0008757
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
TIGRFAMs:TIGR00446 GeneTree:ENSGT00660000095341 EMBL:AADN02061143
IPI:IPI00822637 Ensembl:ENSGALT00000023326 ArrayExpress:F1NH85
Uniprot:F1NH85
Length = 549
Score = 220 (82.5 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 75/237 (31%), Positives = 113/237 (47%)
Query: 221 RALATIYSHPVWMVRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNL 280
R +A YS+ ++++ E I + N ++R N+ K R DL L
Sbjct: 237 RDMAAYYSYSDFLLKMLMDIFPLPELINFLEANEVPRPVTIRTNTLK-TRRRDLAQALI- 294
Query: 281 LKVPHELSLHLDEFIR-VKTGL---QNVIQAGLLKEGLCA---VQDESAGLVVAVVDPQP 333
++LD + KTGL + + G E L +Q S+ L V + PQ
Sbjct: 295 -----NRGVNLDPLGKWSKTGLVIYDSSVPIGATPEYLAGHYMLQGASSLLPVMALAPQE 349
Query: 334 GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLR-ILNETAKLHQVNSVIRTIHA 392
+ I+D C APGGKT Y+A + G++ A D N RLR ++ +L N+V+ +
Sbjct: 350 NERILDMCCAPGGKTSYIAQLMKNTGMILANDSNAERLRSVVGNLHRLGVTNAVVS--NC 407
Query: 393 DLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAA 449
D R F D+VLLDAPCSG GV+SK ++ N+ +D+ LQ ELL +A
Sbjct: 408 DGRQFP-KVLGGFDRVLLDAPCSGTGVISKDPAIKTNKDEKDILRCAHLQKELLLSA 463
>UNIPROTKB|F1NK16 [details] [associations]
symbol:Gga.5513 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR011023 InterPro:IPR018314 InterPro:IPR023273
PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189 GO:GO:0005730
GO:GO:0003723 GO:GO:0032259 GO:GO:0006364 GO:GO:0008757
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 OMA:DLQRVHK
TIGRFAMs:TIGR00446 GeneTree:ENSGT00660000095341 EMBL:AADN02061143
IPI:IPI00575969 Ensembl:ENSGALT00000037120 ArrayExpress:F1NK16
Uniprot:F1NK16
Length = 722
Score = 220 (82.5 bits), Expect = 6.5e-15, P = 6.5e-15
Identities = 75/237 (31%), Positives = 113/237 (47%)
Query: 221 RALATIYSHPVWMVRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNL 280
R +A YS+ ++++ E I + N ++R N+ K R DL L
Sbjct: 313 RDMAAYYSYSDFLLKMLMDIFPLPELINFLEANEVPRPVTIRTNTLK-TRRRDLAQALI- 370
Query: 281 LKVPHELSLHLDEFIR-VKTGL---QNVIQAGLLKEGLCA---VQDESAGLVVAVVDPQP 333
++LD + KTGL + + G E L +Q S+ L V + PQ
Sbjct: 371 -----NRGVNLDPLGKWSKTGLVIYDSSVPIGATPEYLAGHYMLQGASSLLPVMALAPQE 425
Query: 334 GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLR-ILNETAKLHQVNSVIRTIHA 392
+ I+D C APGGKT Y+A + G++ A D N RLR ++ +L N+V+ +
Sbjct: 426 NERILDMCCAPGGKTSYIAQLMKNTGMILANDSNAERLRSVVGNLHRLGVTNAVVS--NC 483
Query: 393 DLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAA 449
D R F D+VLLDAPCSG GV+SK ++ N+ +D+ LQ ELL +A
Sbjct: 484 DGRQFP-KVLGGFDRVLLDAPCSGTGVISKDPAIKTNKDEKDILRCAHLQKELLLSA 539
>ZFIN|ZDB-GENE-050309-7 [details] [associations]
symbol:nop2 "NOP2 nucleolar protein homolog (yeast)"
species:7955 "Danio rerio" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008757 "S-adenosylmethionine-dependent
methyltransferase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR011023 InterPro:IPR018314 InterPro:IPR023273
PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189 ZFIN:ZDB-GENE-050309-7
GO:GO:0003723 GO:GO:0032259 GO:GO:0006364 GO:GO:0008757
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 CTD:4839
KO:K14835 TIGRFAMs:TIGR00446 GeneTree:ENSGT00660000095341
EMBL:CR936322 IPI:IPI00898205 RefSeq:XP_001922354.1
UniGene:Dr.159549 UniGene:Dr.77944 Ensembl:ENSDART00000114272
Ensembl:ENSDART00000130222 GeneID:321130 KEGG:dre:321130
NextBio:20807245 Uniprot:F1QWP7
Length = 739
Score = 220 (82.5 bits), Expect = 6.8e-15, P = 6.8e-15
Identities = 79/250 (31%), Positives = 119/250 (47%)
Query: 213 EGNDRAQ----ARA-LATIYSHPVWMVRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRK 267
EG +R++ RA L T YS+ +++ + E I + N ++R N+ K
Sbjct: 257 EGKERSEYLSLLRADLCTYYSYNQFLISKLMDLFSLSELIDFLEANEVHRPVTIRTNTLK 316
Query: 268 GVTRADLVMQLNLLKVPHELSLHLDEFIR-VKTGL---QNVIQAGLLKEGLCA---VQDE 320
R DL L ++LD + K GL + + G E L +Q
Sbjct: 317 -TRRRDLAQALI------NRGVNLDPLGKWSKVGLVIYDSSVPIGATPEYLAGHYMLQGA 369
Query: 321 SAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLR-ILNETAK 379
S+ L V + PQ G+S++D AAPGGKT YMA + G++ A D N RL+ ++ +
Sbjct: 370 SSFLPVMALSPQEGESVLDMSAAPGGKTTYMAQLMRNTGMIVANDANVDRLKSVVGNIHR 429
Query: 380 LHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELK 439
L N+VI + D R F D+VLLDAPCSG GV+SK ++ + D+
Sbjct: 430 LGVTNAVI--CNYDGRQFP-KVMGGFDRVLLDAPCSGTGVISKDPAVKTGKDEADILRSA 486
Query: 440 ILQDELLDAA 449
LQ EL+ +A
Sbjct: 487 HLQKELILSA 496
>TAIR|locus:2178393 [details] [associations]
symbol:OLI2 "OLIGOCELLULA 2" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006457 "protein folding" evidence=RCA] [GO:0009408 "response
to heat" evidence=RCA] [GO:0009644 "response to high light
intensity" evidence=RCA] [GO:0034976 "response to endoplasmic
reticulum stress" evidence=RCA] [GO:0042542 "response to hydrogen
peroxide" evidence=RCA] InterPro:IPR011023 InterPro:IPR018314
InterPro:IPR023273 PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189
GO:GO:0005829 EMBL:CP002688 GO:GO:0008283 GO:GO:0003723
GO:GO:0009965 GO:GO:0006364 GO:GO:0008757 EMBL:AB026659
GO:GO:0010015 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000224258 KO:K14835 TIGRFAMs:TIGR00446 OMA:LIYANEM
HSSP:O50082 ProtClustDB:CLSN2690331 IPI:IPI00527551
RefSeq:NP_850927.1 UniGene:At.43081 ProteinModelPortal:Q9FG73
SMR:Q9FG73 STRING:Q9FG73 PRIDE:Q9FG73 EnsemblPlants:AT5G55920.1
GeneID:835690 KEGG:ath:AT5G55920 TAIR:At5g55920 InParanoid:Q9FG73
PhylomeDB:Q9FG73 Genevestigator:Q9FG73 Uniprot:Q9FG73
Length = 682
Score = 217 (81.4 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 75/245 (30%), Positives = 127/245 (51%)
Query: 219 QARA-LATIYSHPVWMVRRWTKYLGQEEAIKLM-VWNNSDPSFSLRANSRKGVTRADLV- 275
Q +A L + Y + +++ + E ++L+ + P+ S+R N+ K R DL
Sbjct: 244 QLKADLGSYYGYNSFLIGTLVEMFPPGELMELIEAFEKQRPT-SIRTNTLK-TRRRDLAD 301
Query: 276 MQLNLLKVPHELSLHLDEFIR-VKTGL---QNVIQAGLLKE---GLCAVQDESAGLVVAV 328
+ LN ++LD + K GL + + G E G +Q S+ L V
Sbjct: 302 VLLNR-------GVNLDPLSKWSKVGLVIYDSQVPIGATPEYLAGYYMLQGASSFLPVMA 354
Query: 329 VDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQV---NS 385
+ P+ + IVD AAPGGKT Y+A+ + GL+YA ++ RL+ L TA LH++ N+
Sbjct: 355 LAPRENERIVDVAAAPGGKTTYIAALMKNTGLIYANEMKVPRLKSL--TANLHRMGVTNT 412
Query: 386 VIRTIHA-DLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDE 444
++ +L +TV D+VLLDAPCSG G++SK ++ + ++++++ LQ +
Sbjct: 413 IVCNYDGRELPKVLGQNTV--DRVLLDAPCSGTGIISKDESVKITKTMDEIKKFAHLQKQ 470
Query: 445 LLDAA 449
LL AA
Sbjct: 471 LLLAA 475
Score = 44 (20.5 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 16 TDASKALSKQAASTRKPRTSISTKKRAK 43
T +K L+K KP+TS+ KK AK
Sbjct: 17 TPPTKQLTKSKTPPMKPQTSM-LKKGAK 43
>UNIPROTKB|Q0C183 [details] [associations]
symbol:HNE_1806 "NOL1/NOP2/sun domain protein"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF01189 EMBL:CP000158 GenomeReviews:CP000158_GR eggNOG:COG0144
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 KO:K03500
HOGENOM:HOG000037301 RefSeq:YP_760510.1 ProteinModelPortal:Q0C183
STRING:Q0C183 GeneID:4287178 KEGG:hne:HNE_1806 PATRIC:32216439
OMA:RRLAPIH ProtClustDB:CLSK2531756
BioCyc:HNEP228405:GI69-1834-MONOMER Uniprot:Q0C183
Length = 435
Score = 213 (80.0 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 67/232 (28%), Positives = 113/232 (48%)
Query: 230 PVWMVRRWTKYLGQE---EAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKV-PH 285
P WM + G++ EA + V + D LR N+ K T + LN ++ P
Sbjct: 126 PEWMTPHMERAFGEDTVAEAQAMAVRADVD----LRVNALKTDTEK-AALPLNTVRAEPS 180
Query: 286 EL---SLHLD--EFIRVKTGLQNVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDC 340
+L + H+ + + + L+N+ +G VQD + + A + +PG+ ++D
Sbjct: 181 KLLTNAFHIPARDPTQREDSLENI---PAFSKGWVEVQDAGSQIAAAAANAKPGEQVLDF 237
Query: 341 CAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN 400
CA GGKTL +A+ + G+G ++A DI+ RL L K ++V + +H T D
Sbjct: 238 CAGGGGKTLALAAPMGGKGQIFAYDIDSKRLSALVPRLKRSGTHNV-QLVHPSEGTSLDP 296
Query: 401 STVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDE---LLDAA 449
+ D V +DAPC+G G +R D +W R + K ++D+ L+DAA
Sbjct: 297 LVEQMDLVFVDAPCTGTGTWRRRPDSKWRVRPNQLG--KRIEDQRGILIDAA 346
>POMBASE|SPBP8B7.20c [details] [associations]
symbol:SPBP8B7.20c "RNA methyltransferase Nop2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0008173 "RNA methyltransferase activity"
evidence=ISO] [GO:0008757 "S-adenosylmethionine-dependent
methyltransferase activity" evidence=IEA] [GO:0031167 "rRNA
methylation" evidence=ISO] InterPro:IPR011023 InterPro:IPR018314
InterPro:IPR023273 PRINTS:PR02012 PROSITE:PS01153
PomBase:SPBP8B7.20c Pfam:PF01189 GO:GO:0005730 EMBL:CU329671
GO:GO:0003723 GO:GO:0008173 GO:GO:0008757 GO:GO:0031167
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000224258 KO:K14835 TIGRFAMs:TIGR00446 HSSP:Q96P11
PIR:T40814 RefSeq:NP_596527.1 ProteinModelPortal:O94268
STRING:O94268 PRIDE:O94268 EnsemblFungi:SPBP8B7.20c.1
GeneID:2541274 KEGG:spo:SPBP8B7.20c OMA:TRMLEIV OrthoDB:EOG40S3Q1
NextBio:20802386 Uniprot:O94268
Length = 608
Score = 216 (81.1 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 68/237 (28%), Positives = 118/237 (49%)
Query: 223 LATIYSHPVWMVRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLK 282
+ Y + ++ + + EA++ N ++R N+ K R +L L
Sbjct: 229 ICAYYGYSRFLAEKLFELFSVSEAVEFFEANEMPRPVTIRTNTLK-TQRRELAQAL---- 283
Query: 283 VPHELSLH-LDEFIRVKTGLQ---NVIQAGLLKEGLCA---VQDESAGLVVAVVDPQPGQ 335
+ ++L + ++ +V GLQ + + G E L +Q S+ L V + PQP +
Sbjct: 284 INRGVNLEPIGKWSKV--GLQVFESQVPIGATPEYLAGHYILQAASSFLPVMALAPQPNE 341
Query: 336 SIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQV---NSVIRTIHA 392
I+D +APGGK Y+A+ G+++A D NK R + L+ A +H++ N+++ +
Sbjct: 342 RILDMSSAPGGKVTYVAALQKNTGIIFANDSNKARTKALS--ANIHRLGVRNAIV--CNY 397
Query: 393 DLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAA 449
D R F + D+VLLDAPCSG GV+ K ++ N+ D + L LQ +LL +A
Sbjct: 398 DGRKFPNEVIGGFDRVLLDAPCSGTGVIYKDQSVKTNKSERDFDTLSHLQRQLLLSA 454
>UNIPROTKB|G4MY77 [details] [associations]
symbol:MGG_01292 "Nucleolar protein NOP2" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011023 InterPro:IPR018314 InterPro:IPR023273
PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189 GO:GO:0003723
GO:GO:0030687 GO:GO:0032259 EMBL:CM001232 GO:GO:0006364
GO:GO:0008757 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
KO:K14835 TIGRFAMs:TIGR00446 RefSeq:XP_003714215.1
ProteinModelPortal:G4MY77 EnsemblFungi:MGG_01292T0 GeneID:2679573
KEGG:mgr:MGG_01292 Uniprot:G4MY77
Length = 678
Score = 212 (79.7 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 83/290 (28%), Positives = 136/290 (46%)
Query: 173 DENVRLAKVALRPGAGNLVNGILRKLVLLKDNNSLPLPKLEGNDRAQ-----ARALATIY 227
DE + AK L P L I + +L+D +L EG RA+ + + Y
Sbjct: 226 DEVMPKAKALLAPDLQMLRTRITDTVRVLEDFANL---SEEGRSRAEYSNQLLKDICAYY 282
Query: 228 SHPVWMVRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKVPHEL 287
+ ++ ++ EA N + +R N+ + +R DL L V +
Sbjct: 283 GYSEYLAQKLMDLFPAREAFAFFEANETPRPVVIRTNTLR-TSRRDLAQAL----VNRGV 337
Query: 288 SLH-LDEFIRVKTGLQ---NVIQAGLLKE---GLCAVQDESAGLVVAVVDPQPGQSIVDC 340
+L + ++ +V GLQ + + G E G +Q S+ L V + PQ + ++D
Sbjct: 338 TLEPVGKWSKV--GLQIFDSNVPLGATPEYLGGHYILQAASSFLPVMALCPQENERVLDM 395
Query: 341 CAAPGGKTLYMASCLSGQGLVYAIDINKGRLR-ILNETAKLHQVNSVIRTIHADLRTFAD 399
AAPGGKT + A+ + G++ A D NK R + ++ +L NS++ + D R
Sbjct: 396 SAAPGGKTTHCAALMKNTGVIIANDPNKARSKGLIGNIHRLGVKNSIV--CNYDAREIP- 452
Query: 400 NSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAA 449
N D+VLLDAPCSG GV+SK ++ N+ +D +L +Q +LL AA
Sbjct: 453 NLIGGFDRVLLDAPCSGTGVISKDPSVKTNKTEKDFMQLPHVQKQLLLAA 502
>UNIPROTKB|Q0BWV2 [details] [associations]
symbol:HNE_3368 "Putative ribosomal RNA small subunit
methyltransferase B" species:228405 "Hyphomonas neptunium ATCC
15444" [GO:0000154 "rRNA modification" evidence=ISS] [GO:0016434
"rRNA (cytosine) methyltransferase activity" evidence=ISS]
InterPro:IPR006027 Pfam:PF01029 Pfam:PF01189 GO:GO:0006355
GO:GO:0003723 EMBL:CP000158 GenomeReviews:CP000158_GR
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
Gene3D:1.10.940.10 SUPFAM:SSF48013 KO:K03500 HOGENOM:HOG000037302
RefSeq:YP_762041.1 ProteinModelPortal:Q0BWV2 STRING:Q0BWV2
GeneID:4290149 KEGG:hne:HNE_3368 PATRIC:32219615 OMA:VPDHSAV
ProtClustDB:CLSK2532062 BioCyc:HNEP228405:GI69-3370-MONOMER
GO:GO:0016434 Uniprot:Q0BWV2
Length = 423
Score = 183 (69.5 bits), Expect = 7.3e-14, Sum P(2) = 7.3e-14
Identities = 50/134 (37%), Positives = 73/134 (54%)
Query: 317 VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNE 376
VQD +A + ++ PQ G+ I+D CAAPGGKTL +A+ +G V A+D ++ RL L E
Sbjct: 218 VQDAAARIPAQLLSPQTGERILDLCAAPGGKTLQLAA--AGAD-VTALDRSRPRLERLKE 274
Query: 377 TAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDME 436
L + I AD +A + K+LLDAPCS LG L + + W + +D+
Sbjct: 275 N--LARTGLHAEVIIADGEAWAPPALFP--KILLDAPCSALGTLRRHPESAWIKTEDDVA 330
Query: 437 ELKILQDELLDAAS 450
+Q LL AA+
Sbjct: 331 RFPGVQARLLAAAA 344
Score = 66 (28.3 bits), Expect = 7.3e-14, Sum P(2) = 7.3e-14
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 183 LRPGAGNLVNGILRKLVLLKDNNSLP--LPKLEGNDRAQARALAT-IYSHPVWMVRRWTK 239
+R AG L+N +L K L D + L+G+DRA ARA+A+ H W+ R +
Sbjct: 6 IRLAAGRLLNLVLDKKRTLDDALATDDAYNNLDGSDRAFARAIASSALRHLGWIDRGVSP 65
Query: 240 YLGQ 243
+L +
Sbjct: 66 FLSR 69
Score = 64 (27.6 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 30/111 (27%), Positives = 49/111 (44%)
Query: 153 ILRIGFYEIVKLDMPPYAVVDENVRLAKV--ALRPGAGNLVNGILRKLVLLKDNNSLPLP 210
++R G +I +D+P +A V E V A++ R G G L N LR++ ++ S P
Sbjct: 81 LIRAGAAQIWFMDVPHHAAVSETVEAARLWSPARSGGGFL-NAALRRVT---ESES---P 133
Query: 211 KLEGNDRAQARALATIYSHPVWMVRRWTKYLGQEEAIKLMVWNNSDPSFSL 261
A ++ + P W+ R G+E A L + +PS L
Sbjct: 134 ---------AATISPLALWPDWLASRLGSAYGREAAEALALSQLEEPSLHL 175
>TAIR|locus:2133832 [details] [associations]
symbol:AT4G26600 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005730 "nucleolus" evidence=ISS;IDA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0008757 "S-adenosylmethionine-dependent
methyltransferase activity" evidence=IEA] [GO:0006606 "protein
import into nucleus" evidence=RCA] InterPro:IPR011023
InterPro:IPR018314 InterPro:IPR023273 PRINTS:PR02012
PROSITE:PS01153 Pfam:PF01189 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0005730 GO:GO:0003723 GO:GO:0006364
GO:GO:0008757 eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 HOGENOM:HOG000224258 KO:K14835 TIGRFAMs:TIGR00446
HSSP:O50082 OMA:SANLHRM EMBL:AY070425 EMBL:AY133836 IPI:IPI00533545
RefSeq:NP_194390.2 UniGene:At.28358 ProteinModelPortal:Q8VYM6
SMR:Q8VYM6 STRING:Q8VYM6 PaxDb:Q8VYM6 PRIDE:Q8VYM6
EnsemblPlants:AT4G26600.1 GeneID:828767 KEGG:ath:AT4G26600
TAIR:At4g26600 InParanoid:Q8VYM6 PhylomeDB:Q8VYM6
ProtClustDB:CLSN2690331 Genevestigator:Q8VYM6 Uniprot:Q8VYM6
Length = 671
Score = 214 (80.4 bits), Expect = 8.0e-14, Sum P(2) = 8.0e-14
Identities = 76/269 (28%), Positives = 139/269 (51%)
Query: 195 LRKLVLLKDNNSLPLPKLEGNDR----AQARA-LATIYSHPVWMVRRWTKYLGQEEAIKL 249
+R++V + N PK + ++R Q +A L++ Y + +++ + E ++L
Sbjct: 199 IREIVRILSNFKDLKPKGDKHERNDYVGQLKADLSSYYGYNEFLIGTLIEMFPVVELMEL 258
Query: 250 M-VWNNSDPSFSLRANSRKGVTRADLVMQLNLLKVPHELSLHLDEFIR-VKTGL---QNV 304
+ + P+ S+R N+ K R DL ++L ++LD + K GL +
Sbjct: 259 IEAFEKKRPT-SIRTNTLK-TRRRDLA---DILL---NRGVNLDPLSKWSKVGLIVYDSQ 310
Query: 305 IQAGLLKE---GLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLV 361
+ G E G +Q S+ L V + P+ + +VD AAPGGKT Y+A+ + G++
Sbjct: 311 VPIGATPEYLAGFYMLQSASSFLPVMALAPREKERVVDMAAAPGGKTTYVAALMKNTGII 370
Query: 362 YAIDINKGRLRILNETAKLHQV---NSVIRTIHA-DLRTFADNSTVKCDKVLLDAPCSGL 417
YA ++ RL+ L+ A LH++ N+++ +L S+V D+VLLDAPCSG
Sbjct: 371 YANEMKVPRLKSLS--ANLHRMGVTNTIVCNYDGRELTKVLGQSSV--DRVLLDAPCSGT 426
Query: 418 GVLSKRADLRWNRRLEDMEELKILQDELL 446
GV+SK ++ ++ +D+++ LQ +L+
Sbjct: 427 GVISKDESVKTSKSADDIKKFAHLQKQLI 455
Score = 39 (18.8 bits), Expect = 8.0e-14, Sum P(2) = 8.0e-14
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 2 SMAQAVSLPRILVSTDASKALSKQAASTRKPRTSISTKKRAK 43
S +Q L + ++ KA Q +K R IS KK K
Sbjct: 12 SNSQTPPLNKQTKASPLKKAAKTQKPPLKKQRKCISEKKPLK 53
>SGD|S000005005 [details] [associations]
symbol:NOP2 "Probable RNA m(5)C methyltransferase"
species:4932 "Saccharomyces cerevisiae" [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=IEA;ISS] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA;TAS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA;TAS] [GO:0008173
"RNA methyltransferase activity" evidence=TAS] [GO:0030687
"preribosome, large subunit precursor" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
InterPro:IPR011023 InterPro:IPR018314 InterPro:IPR023273
PRINTS:PR02012 PROSITE:PS01153 SGD:S000005005 Pfam:PF01189
GO:GO:0005730 EMBL:BK006947 GO:GO:0003723 GO:GO:0030687 EMBL:U12141
GO:GO:0006364 GO:GO:0008173 GO:GO:0008757 RefSeq:NP_014345.3
GeneID:855674 KEGG:sce:YNL053W KO:K11240 eggNOG:COG0144
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000224258 KO:K14835 TIGRFAMs:TIGR00446 OrthoDB:EOG40S3Q1
EMBL:X82656 EMBL:Z71337 EMBL:AY693060 EMBL:X83512 PIR:A55188
RefSeq:NP_014338.3 ProteinModelPortal:P40991 SMR:P40991
DIP:DIP-6488N IntAct:P40991 MINT:MINT-612803 STRING:P40991
PaxDb:P40991 PeptideAtlas:P40991 EnsemblFungi:YNL061W GeneID:855664
KEGG:sce:YNL061W CYGD:YNL061w GeneTree:ENSGT00660000095341
OMA:LIYANEM NextBio:979935 Genevestigator:P40991 GermOnline:YNL061W
Uniprot:P40991
Length = 618
Score = 208 (78.3 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 77/274 (28%), Positives = 127/274 (46%)
Query: 189 NLVNGILRKLVLLKDNNSLPLPKLEGNDRAQA--RALATI---YSHPVWMVRRWTKYLGQ 243
NL + R + ++K + EG R + R L I + + ++ +
Sbjct: 196 NLTSTRTRMIEIVKVLENFKTLGAEGRSRGEYVDRLLKDICEYFGYTPFLAEKLFNLFSP 255
Query: 244 EEAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKVPHELSLH-LDEFIRVKTGLQ 302
EA++ N ++R N+ K R DL L V ++L + + +V GLQ
Sbjct: 256 AEAMEFFEANEIARPITIRTNTLK-TRRRDLAQTL----VNRGVNLQPIGSWTKV--GLQ 308
Query: 303 ---NVIQAGLLKEGLCA---VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLS 356
+ + G E L +Q S+ L V +DP + I+D AAPGGKT Y+++ +
Sbjct: 309 IFDSQVPIGATPEYLAGHYILQAASSFLPVIALDPHENERILDMAAAPGGKTTYISAMMK 368
Query: 357 GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTI-HADLRTFADNSTVKCDKVLLDAPCS 415
G V+A D NK R + L A +H++ + + D R F D++LLDAPCS
Sbjct: 369 NTGCVFANDANKSRTKSL--IANIHRLGCTNTIVCNYDAREFP-KVIGGFDRILLDAPCS 425
Query: 416 GLGVLSKRADLRWNRRLEDMEELKILQDELLDAA 449
G GV+ K ++ +R +D ++ LQ +LL +A
Sbjct: 426 GTGVIGKDQSVKVSRTEKDFIQIPHLQKQLLLSA 459
>CGD|CAL0000046 [details] [associations]
symbol:orf19.501 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] InterPro:IPR011023 InterPro:IPR018314
InterPro:IPR023273 PRINTS:PR02012 PROSITE:PS01153 CGD:CAL0000046
Pfam:PF01189 GO:GO:0003723 GO:GO:0032259 EMBL:AACQ01000055
EMBL:AACQ01000054 GO:GO:0006364 GO:GO:0008757 eggNOG:COG0144
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 KO:K14835
TIGRFAMs:TIGR00446 RefSeq:XP_717364.1 RefSeq:XP_717453.1
ProteinModelPortal:Q5A6Q3 STRING:Q5A6Q3 GeneID:3640912
GeneID:3640977 KEGG:cal:CaO19.501 KEGG:cal:CaO19.8131
Uniprot:Q5A6Q3
Length = 618
Score = 205 (77.2 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 69/215 (32%), Positives = 111/215 (51%)
Query: 245 EAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKVPHELSLH-LDEFIRVKTGLQ- 302
EA++ N ++R N+ K R DL L V ++L + + +V GLQ
Sbjct: 261 EAMEFFEANEIARPITIRTNTLK-TRRRDLAQAL----VNKGVNLQPIGSWTKV--GLQI 313
Query: 303 --NVIQAGLLKEGLCA---VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSG 357
+ + G E L +Q S+ L V ++PQ + I+D AAPGGKT Y+++ +
Sbjct: 314 FDSQVPIGATPEYLAGQYILQAASSFLPVMALEPQENERILDMAAAPGGKTTYISALMKN 373
Query: 358 QGLVYAIDINKGRLRILNETAKLHQV---NSVIRTIHADLRTFADNSTVKCDKVLLDAPC 414
G V+A D NK R + L A +H++ N+++ + D R F D+VLLDAPC
Sbjct: 374 TGCVFANDANKARTKSL--IANIHRLGCKNTIV--CNYDAREFP-KVIGGFDRVLLDAPC 428
Query: 415 SGLGVLSKRADLRWNRRLEDMEELKILQDELLDAA 449
SG GV++K ++ +R +D ++ LQ +LL +A
Sbjct: 429 SGTGVIAKDESVKVSRTEKDFMQIPHLQKQLLLSA 463
Score = 46 (21.3 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 16/51 (31%), Positives = 22/51 (43%)
Query: 15 STDASKALSKQAASTRKPRTSISTKKRAKVSPSRRTQNLNLEVSPHRAVSA 65
ST +SK + +S KP+T K +V +NL EV SA
Sbjct: 50 STSSSKQTDRTESSKPKPKTKSKVTKDVEVE--EEVENLP-EVDLEELASA 97
>WB|WBGene00021073 [details] [associations]
symbol:nol-1 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040019 "positive regulation of embryonic
development" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040015
"negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040039 "inductive cell migration" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
InterPro:IPR011023 InterPro:IPR018314 InterPro:IPR023273
PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0000003 GO:GO:0003723 GO:GO:0040039 GO:GO:0040015
GO:GO:0040019 GO:GO:0032259 GO:GO:0006364 GO:GO:0008757
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000224258 KO:K14835 TIGRFAMs:TIGR00446
GeneTree:ENSGT00660000095341 EMBL:FO081752 HSSP:O50082 PIR:D88022
PIR:T33803 RefSeq:NP_493742.1 ProteinModelPortal:Q9TYV5 SMR:Q9TYV5
STRING:Q9TYV5 PaxDb:Q9TYV5 EnsemblMetazoa:W07E6.1 GeneID:173437
KEGG:cel:CELE_W07E6.1 UCSC:W07E6.1 CTD:173437 WormBase:W07E6.1
InParanoid:Q9TYV5 OMA:SANLHRM NextBio:879655 Uniprot:Q9TYV5
Length = 664
Score = 207 (77.9 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 63/212 (29%), Positives = 109/212 (51%)
Query: 245 EAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKVPHELSLHLDEFIRVKTGL--- 301
E ++ + N++ ++RANS K V R DL NL+ + D K GL
Sbjct: 217 ELLEFLEANDNPRPVTIRANSLK-VKRRDLAK--NLINRGMNVDPAADW---TKVGLVVY 270
Query: 302 QNVIQAGLLKEGLCA---VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQ 358
+ + G E L +Q ++ L V + PQPG ++D C+APGGKT ++A+ +
Sbjct: 271 DSQVPVGATPEYLAGHYMIQGLNSLLPVMALAPQPGDRVLDMCSAPGGKTSHIAALMKNS 330
Query: 359 GLVYAIDINKGRLR-ILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGL 417
G+++A D N R R I+ +L N+V+ + + F+ D++LLDAPCSG
Sbjct: 331 GVLFANDANFTRCRAIIGNLHRLGVNNTVVCNLGGE--EFSKIRPNGFDRILLDAPCSGT 388
Query: 418 GVLSKRADLRWNRRLEDMEELKILQDELLDAA 449
GV+ K ++ ++ +D++ +Q +L+ +A
Sbjct: 389 GVIWKDQSVKTSKDSQDVQRRHTMQRQLILSA 420
>UNIPROTKB|Q60343 [details] [associations]
symbol:trm4 "tRNA (cytosine(48)-C(5))-methyltransferase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0016428
"tRNA (cytosine-5-)-methyltransferase activity" evidence=IDA]
[GO:0030488 "tRNA methylation" evidence=IDA] InterPro:IPR011023
InterPro:IPR018314 PROSITE:PS01153 Pfam:PF01189 GO:GO:0005737
GO:GO:0003723 EMBL:L77117 GenomeReviews:L77117_GR GO:GO:0006364
eggNOG:COG0144 GO:GO:0016428 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 TIGRFAMs:TIGR00446 PIR:B64303 RefSeq:NP_246989.1
PDB:3A4T PDB:3AJD PDBsum:3A4T PDBsum:3AJD ProteinModelPortal:Q60343
GeneID:1450864 KEGG:mja:MJ_0026 OMA:NEPFFIA ProtClustDB:CLSK876038
EvolutionaryTrace:Q60343 Uniprot:Q60343
Length = 274
Score = 189 (71.6 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 46/134 (34%), Positives = 78/134 (58%)
Query: 318 QDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNET 377
Q S+ + V++P+ I+D CAAPGGKT ++A + +G + A++I+K R + L
Sbjct: 68 QSISSMIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSN 127
Query: 378 A-KLHQVNSVIRTIHADLRTFAD---NSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLE 433
++ +N++I I+AD+R + D + + DK+LLDAPCSG ++ D N E
Sbjct: 128 INRMGVLNTII--INADMRKYKDYLLKNEIFFDKILLDAPCSG-NIIK---DKNRNVSEE 181
Query: 434 DMEELKILQDELLD 447
D++ + Q EL+D
Sbjct: 182 DIKYCSLRQKELID 195
>UNIPROTKB|Q3AAI6 [details] [associations]
symbol:CHY_2029 "NOL1/NOP2/sun family protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011023
InterPro:IPR018314 PROSITE:PS01153 Pfam:PF01189 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0003723 GO:GO:0006364 GO:GO:0008757
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
TIGRFAMs:TIGR00446 RefSeq:YP_360848.1 ProteinModelPortal:Q3AAI6
STRING:Q3AAI6 GeneID:3728223 KEGG:chy:CHY_2029 PATRIC:21277139
HOGENOM:HOG000218116 OMA:YAGLYYI
BioCyc:CHYD246194:GJCN-2028-MONOMER Uniprot:Q3AAI6
Length = 449
Score = 195 (73.7 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 67/223 (30%), Positives = 106/223 (47%)
Query: 237 WTKY---LGQEEAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKV----PHELSL 289
W KY LG A KL N+ P LR N K +++ DL + L+ P L
Sbjct: 5 WEKYQTFLGTA-AEKLKEVINAPPFRGLRINPEK-ISQEDLYRRYGYLETVPWCPEGYYL 62
Query: 290 HLDEFIRVKTGLQNVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTL 349
D F+ G AG +Q+ SA L V V+DP+PG ++D AAPGGK+
Sbjct: 63 SEDMFL----GKDPWHWAGAFY-----LQEPSAMLPVEVLDPKPGDKVLDLAAAPGGKST 113
Query: 350 YMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 409
+ S L G+G++ A ++N R ++L E + + + ++ + D++L
Sbjct: 114 QILSKLKGEGILVANEVNSSRAKVLTENLERWGYENFL-VLNESPPNLEEKFEAYFDRIL 172
Query: 410 LDAPCSGLGVLSK--RADLRWNRRLEDMEELKILQDELLDAAS 450
+DAPCSG G+ K +A W+ +E + + Q +LL A+
Sbjct: 173 VDAPCSGEGMFRKNPKAIDEWS--IEHVLGCSVRQKKLLTTAA 213
>TIGR_CMR|CHY_2029 [details] [associations]
symbol:CHY_2029 "NOL1/NOP2/sun family protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011023
InterPro:IPR018314 PROSITE:PS01153 Pfam:PF01189 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0003723 GO:GO:0006364 GO:GO:0008757
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
TIGRFAMs:TIGR00446 RefSeq:YP_360848.1 ProteinModelPortal:Q3AAI6
STRING:Q3AAI6 GeneID:3728223 KEGG:chy:CHY_2029 PATRIC:21277139
HOGENOM:HOG000218116 OMA:YAGLYYI
BioCyc:CHYD246194:GJCN-2028-MONOMER Uniprot:Q3AAI6
Length = 449
Score = 195 (73.7 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 67/223 (30%), Positives = 106/223 (47%)
Query: 237 WTKY---LGQEEAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKV----PHELSL 289
W KY LG A KL N+ P LR N K +++ DL + L+ P L
Sbjct: 5 WEKYQTFLGTA-AEKLKEVINAPPFRGLRINPEK-ISQEDLYRRYGYLETVPWCPEGYYL 62
Query: 290 HLDEFIRVKTGLQNVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTL 349
D F+ G AG +Q+ SA L V V+DP+PG ++D AAPGGK+
Sbjct: 63 SEDMFL----GKDPWHWAGAFY-----LQEPSAMLPVEVLDPKPGDKVLDLAAAPGGKST 113
Query: 350 YMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 409
+ S L G+G++ A ++N R ++L E + + + ++ + D++L
Sbjct: 114 QILSKLKGEGILVANEVNSSRAKVLTENLERWGYENFL-VLNESPPNLEEKFEAYFDRIL 172
Query: 410 LDAPCSGLGVLSK--RADLRWNRRLEDMEELKILQDELLDAAS 450
+DAPCSG G+ K +A W+ +E + + Q +LL A+
Sbjct: 173 VDAPCSGEGMFRKNPKAIDEWS--IEHVLGCSVRQKKLLTTAA 213
>FB|FBgn0033741 [details] [associations]
symbol:CG8545 species:7227 "Drosophila melanogaster"
[GO:0005730 "nucleolus" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] [GO:0008757 "S-adenosylmethionine-dependent
methyltransferase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR011023 InterPro:IPR018314
InterPro:IPR023273 PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189
EMBL:AE013599 GO:GO:0003723 GO:GO:0032259 GO:GO:0006364
GO:GO:0008757 eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 KO:K14835 TIGRFAMs:TIGR00446
GeneTree:ENSGT00660000095341 EMBL:BT088930 RefSeq:NP_610786.2
UniGene:Dm.2211 SMR:A1Z909 IntAct:A1Z909 STRING:A1Z909
EnsemblMetazoa:FBtr0087934 GeneID:36365 KEGG:dme:Dmel_CG8545
UCSC:CG8545-RA FlyBase:FBgn0033741 InParanoid:A1Z909 OMA:IMTGFDR
OrthoDB:EOG4GB5N7 GenomeRNAi:36365 NextBio:798159 Uniprot:A1Z909
Length = 891
Score = 198 (74.8 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 65/233 (27%), Positives = 111/233 (47%)
Query: 221 RALATIYSHPVWMVRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNL 280
R L YS+ +++ + L E ++ + + ++R N+ K R DL L
Sbjct: 323 RDLCLYYSYNEFLMEKLMDMLPLTELMEYLEASEIARPLTIRTNTLK-TRRRDLAGALI- 380
Query: 281 LKVPHELSLHLDEFIR-VKTGL---QNVIQAGLLKEGLCA---VQDESAGLVVAVVDPQP 333
++LD + K GL + + G E L +Q S+ L V + PQ
Sbjct: 381 -----NRGVNLDPLGKWTKVGLVVFNSQVPLGATPEYLAGHYMIQGASSLLPVMALAPQE 435
Query: 334 GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHAD 393
+ I+D C+APGGK ++AS + G+++A D N+ R++ + A H++ V + +
Sbjct: 436 NERILDMCSAPGGKGSHIASIMKNTGVLFANDSNRDRIKAI--VANFHRLGIVNAVVSCE 493
Query: 394 LRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELL 446
T N D+VLLDAPC+G GV+SK ++ + D++ LQ +LL
Sbjct: 494 DGTKFRNIMTGFDRVLLDAPCTGTGVVSKDPSVKTTKSEVDVQRCYNLQRKLL 546
>TAIR|locus:2179749 [details] [associations]
symbol:AT5G26180 "AT5G26180" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF01189 EMBL:CP002688 GenomeReviews:BA000015_GR
KO:K15264 eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 HOGENOM:HOG000203203 OMA:TLKTCSD EMBL:BT008590
EMBL:AK117681 IPI:IPI00521639 RefSeq:NP_197990.2 RefSeq:NP_851079.1
UniGene:At.30863 ProteinModelPortal:Q8GYE8 SMR:Q8GYE8 PaxDb:Q8GYE8
PRIDE:Q8GYE8 EnsemblPlants:AT5G26180.1 EnsemblPlants:AT5G26180.2
GeneID:832687 KEGG:ath:AT5G26180 TAIR:At5g26180 InParanoid:Q8GYE8
PhylomeDB:Q8GYE8 ProtClustDB:CLSN2680267 ArrayExpress:Q8GYE8
Genevestigator:Q8GYE8 Uniprot:Q8GYE8
Length = 567
Score = 197 (74.4 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 41/119 (34%), Positives = 67/119 (56%)
Query: 309 LLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINK 368
L+ G +Q +++ +V A + PQ G ++D C+APG KT+++A+ + GQG + A ++N+
Sbjct: 280 LVANGRIFLQGKASSMVAAALQPQAGWEVLDACSAPGNKTIHLAALMEGQGKIIACELNE 339
Query: 369 GRLRILNETAKLHQVNSVIRTIHADLRTF--ADNSTVKCDKVLLDAPCSGLGVLSKRAD 425
R++ L T KL ++ I H D D S K +LLD CSG G ++ R D
Sbjct: 340 ERVKRLEHTIKLSGASN-IEVCHGDFLGLNPKDPSFAKIRAILLDPSCSGSGTITDRLD 397
Score = 39 (18.8 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 27 ASTRKPRTSISTKKR 41
A +RKP+T +TK++
Sbjct: 73 AESRKPKTPPATKQK 87
>ASPGD|ASPL0000013404 [details] [associations]
symbol:AN8073 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008757 "S-adenosylmethionine-dependent
methyltransferase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR011023 InterPro:IPR018314
InterPro:IPR023273 PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189
GO:GO:0003723 EMBL:BN001302 GO:GO:0030687 GO:GO:0006364
GO:GO:0008757 EMBL:AACD01000139 eggNOG:COG0144 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 HOGENOM:HOG000224258 KO:K14835
TIGRFAMs:TIGR00446 OrthoDB:EOG40S3Q1 RefSeq:XP_681342.1
ProteinModelPortal:Q5AUF7 STRING:Q5AUF7
EnsemblFungi:CADANIAT00004099 GeneID:2869314 KEGG:ani:AN8073.2
OMA:LEPVGKW Uniprot:Q5AUF7
Length = 788
Score = 192 (72.6 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 74/276 (26%), Positives = 122/276 (44%)
Query: 183 LRPGAGNLVNGILRKLVLLKDNNSLPLPKLEGNDRAQA--RALATIYSHPVWMVRRWTKY 240
L P L I + +L D +L P D Q + T Y + ++ +
Sbjct: 237 LAPNLQLLRTRITETIRILGDLKTLGQPGKSRADYTQLLLNDICTYYGYTPFLAEKLFNL 296
Query: 241 LGQEEAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKVPHELSLHLDEFIRVKTG 300
EA N + +R N+ + R L L V E + ++ +V G
Sbjct: 297 FTPMEAFAFFEANETPRPVVIRTNTLR-TNRRSLAQALINRGVVLE---PVGKWSKV--G 350
Query: 301 LQ---NVIQAGLLKEGLCA---VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASC 354
LQ + + G E L +Q S+ L V + PQ + I+D +APGGKT Y+++
Sbjct: 351 LQVFESAVPLGATPEYLAGHYILQAASSFLPVMALAPQENERILDMASAPGGKTTYISAL 410
Query: 355 LSGQGLVYAIDINKGRLR-ILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAP 413
+ G V A D +K R + ++ +L N+++ + D RT + D+VLLDAP
Sbjct: 411 MRNTGCVIANDASKPRAKGLIGNIHRLGCKNTIVTNL--DARTAFPKAMGGFDRVLLDAP 468
Query: 414 CSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAA 449
C+G GV++K ++ N+ D + +Q +LL AA
Sbjct: 469 CTGTGVIAKDPSVKTNKNERDFLAIPHMQRQLLLAA 504
>TIGR_CMR|SPO_3376 [details] [associations]
symbol:SPO_3376 "ribosomal RNA small subunit
methyltransferase B, putative" species:246200 "Ruegeria pomeroyi
DSS-3" [GO:0000154 "rRNA modification" evidence=ISS] [GO:0016434
"rRNA (cytosine) methyltransferase activity" evidence=ISS]
InterPro:IPR006027 Pfam:PF01029 Pfam:PF01189 GO:GO:0006355
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003723 GO:GO:0008168
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
Gene3D:1.10.940.10 SUPFAM:SSF48013 KO:K03500 HOGENOM:HOG000037302
OMA:VPDHSAV RefSeq:YP_168572.1 ProteinModelPortal:Q5LN36
GeneID:3195741 KEGG:sil:SPO3376 PATRIC:23380205
ProtClustDB:CLSK934144 Uniprot:Q5LN36
Length = 423
Score = 187 (70.9 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 46/110 (41%), Positives = 66/110 (60%)
Query: 317 VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNE 376
VQD +A L V ++DPQPG+S++D CAAPGGKT+ +A+ +G V A+DI++GR+ + E
Sbjct: 212 VQDAAAALPVQLLDPQPGESVLDLCAAPGGKTMQLAA--AG-ARVTALDISEGRMARVRE 268
Query: 377 TAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADL 426
L + T+ D A + D VLLDAPCS G + + DL
Sbjct: 269 N--LARTGLSAETVVGD----ALEQGGQYDAVLLDAPCSATGTIRRHPDL 312
Score = 39 (18.8 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 261 LRANSRKGVTRADLVMQLNLLKVP 284
L ++ +G+ RAD +++ +L K P
Sbjct: 49 LTLDTLRGLERADRLLKPHLQKAP 72
>UNIPROTKB|P76273 [details] [associations]
symbol:rsmF "16S rRNA m5C1407 methyltransferase"
species:83333 "Escherichia coli K-12" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0070475 "rRNA base methylation" evidence=IMP]
[GO:0009383 "rRNA (cytosine-C5-)-methyltransferase activity"
evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA]
HAMAP:MF_01579 InterPro:IPR011023 InterPro:IPR018314
InterPro:IPR023545 PROSITE:PS01153 Pfam:PF01189 GO:GO:0005737
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003723 GO:GO:0070475 eggNOG:COG0144
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
TIGRFAMs:TIGR00446 GO:GO:0009383 PIR:C64945 RefSeq:NP_416349.2
RefSeq:YP_490097.1 PDB:2FRX PDBsum:2FRX ProteinModelPortal:P76273
SMR:P76273 PRIDE:P76273 EnsemblBacteria:EBESCT00000004750
EnsemblBacteria:EBESCT00000016770 GeneID:12930164 GeneID:946348
KEGG:ecj:Y75_p1811 KEGG:eco:b1835 PATRIC:32118991 EchoBASE:EB3777
EcoGene:EG14023 HOGENOM:HOG000218115 KO:K11392 OMA:VANEYSA
ProtClustDB:PRK11933 BioCyc:EcoCyc:G7008-MONOMER
BioCyc:ECOL316407:JW5301-MONOMER BioCyc:MetaCyc:G7008-MONOMER
EvolutionaryTrace:P76273 Genevestigator:P76273 Uniprot:P76273
Length = 479
Score = 186 (70.5 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 59/199 (29%), Positives = 100/199 (50%)
Query: 260 SLRANSRKGVTRADLVMQLNLLKVPHELSLH----LDEFIRVKTGLQNVIQAGLLKE--- 312
S+R N+ K ++ AD + L P+ +L +E ++ ++ + G E
Sbjct: 40 SIRVNTLK-ISVADFLQ----LTAPYGWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLS 94
Query: 313 GLCAVQDESAGLVVAVV--DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGR 370
GL +Q+ S+ L VA + D Q ++D AAPG KT +++ ++ +G + A + + R
Sbjct: 95 GLFYIQEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASR 154
Query: 371 LRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNR 430
+++L+ +++V T H D R F D +LLDAPCSG GV+ K D N
Sbjct: 155 VKVLHANISRCGISNVALT-HFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNW 213
Query: 431 RLEDMEELKILQDELLDAA 449
E +E+ Q EL+D+A
Sbjct: 214 SPESNQEIAATQRELIDSA 232
>UNIPROTKB|F1RWA0 [details] [associations]
symbol:NSUN6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008168 "methyltransferase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR002478
InterPro:IPR018314 PROSITE:PS01153 PROSITE:PS50890 SMART:SM00359
Pfam:PF01189 GO:GO:0003723 GO:GO:0008168 GO:GO:0032259
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 GeneTree:ENSGT00660000095341
CTD:221078 OMA:DTEGEPP EMBL:CU929575 EMBL:FP102227
RefSeq:XP_003130779.1 UniGene:Ssc.21317 Ensembl:ENSSSCT00000012085
GeneID:100524391 KEGG:ssc:100524391 Uniprot:F1RWA0
Length = 472
Score = 184 (69.8 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 47/146 (32%), Positives = 81/146 (55%)
Query: 313 GLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLR 372
G +Q+ + +V V+DPQPG+ I+D CAAPGGKT ++A+ + QG V A+D ++
Sbjct: 214 GYLFLQNLPSAVVTHVLDPQPGERILDLCAAPGGKTTHIAARMRDQGEVIALDKIANKVE 273
Query: 373 ILNETAKLHQVNSV-------IRTIHADLRTFADNSTV--KCDKVLLDAPCSGLGVLSKR 423
+ + A L +NS+ + + D+ T + + D++LLDAPCSG+G +R
Sbjct: 274 KIKQNALLLGLNSIRAFCFDGTKALKLDIDTEGEPPFLPESFDRILLDAPCSGMG---QR 330
Query: 424 ADLRWNRRLEDMEELKILQDELLDAA 449
++ L+++ + LQ +L A
Sbjct: 331 PNMACTWTLKEVTSYQPLQRKLFTVA 356
>RGD|1309535 [details] [associations]
symbol:Nsun6 "NOP2/Sun domain family, member 6" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA]
InterPro:IPR002478 InterPro:IPR018314 Pfam:PF01472 PROSITE:PS01153
PROSITE:PS50890 SMART:SM00359 Pfam:PF01189 RGD:1309535
GO:GO:0003723 GO:GO:0008168 GO:GO:0032259 InterPro:IPR015947
SUPFAM:SSF88697 eggNOG:COG0144 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 HOGENOM:HOG000224258
GeneTree:ENSGT00660000095341 CTD:221078 HOVERGEN:HBG060395
OMA:DTEGEPP OrthoDB:EOG46T31F EMBL:CH473990 EMBL:BC162024
IPI:IPI00190813 RefSeq:NP_001100837.1 UniGene:Rn.11617
STRING:B1WC69 Ensembl:ENSRNOT00000025046 GeneID:307148
KEGG:rno:307148 UCSC:RGD:1309535 NextBio:657011
Genevestigator:B1WC69 Uniprot:B1WC69
Length = 476
Score = 184 (69.8 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 58/197 (29%), Positives = 99/197 (50%)
Query: 264 NSRKGVTRADLVMQLNLLKVPHELSLHLDEFIRVKTGLQNVIQAGLLKEGLCAVQDESAG 323
N ++R D+ L LK + + + E I + NV+ G +Q+ +
Sbjct: 174 NGISELSRKDIFNGLPDLK---GIGIRMTEPIYLSPSFDNVLS------GYIFLQNLPST 224
Query: 324 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKL--- 380
+V V+DPQPG+ I+D CAAPGGKT ++A+ + QG V A+D ++ L + A L
Sbjct: 225 VVAHVLDPQPGEKILDLCAAPGGKTTHIAALMRDQGEVIALDKILTKVTKLKQNASLLGL 284
Query: 381 HQVNS----VIRTIHADLRTFADNSTV----KCDKVLLDAPCSGLGVLSKRADLRWNRRL 432
H + + + + ++ D + D++LLDAPCSGLG +R ++ L
Sbjct: 285 HSIRAFCFDATKALKLEVMDGVDGAPPFLPESFDRILLDAPCSGLG---QRPNMACTWTL 341
Query: 433 EDMEELKILQDELLDAA 449
+++ + LQ +LL+ A
Sbjct: 342 KEVTSYQPLQRKLLNVA 358
>UNIPROTKB|E1BQJ7 [details] [associations]
symbol:NSUN6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] InterPro:IPR002478
InterPro:IPR018314 PROSITE:PS01153 PROSITE:PS50890 Pfam:PF01189
GO:GO:0003723 GO:GO:0008168 GO:GO:0032259 InterPro:IPR015947
SUPFAM:SSF88697 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 GeneTree:ENSGT00660000095341 CTD:221078
EMBL:AADN02000637 IPI:IPI00586956 RefSeq:XP_425980.2
ProteinModelPortal:E1BQJ7 Ensembl:ENSGALT00000013950 GeneID:428419
KEGG:gga:428419 OMA:FIAKFMK NextBio:20829415 Uniprot:E1BQJ7
Length = 469
Score = 181 (68.8 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 49/174 (28%), Positives = 93/174 (53%)
Query: 287 LSLHLDEFIRVKTGLQNVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGG 346
L + + E + + ++V+ + L + L +V +V V++PQPG+ I+D CAAPGG
Sbjct: 194 LGVRMTEPVYLSPSFESVLPSHLFLQNLPSV------VVSHVLNPQPGERILDMCAAPGG 247
Query: 347 KTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSV-------IRTIHADLRTFAD 399
KT ++A+ + QG V A+D +++ + + A+L Q+N + + + + R
Sbjct: 248 KTTHLATLMHDQGEVIAMDKIANKVKKIKQNAELLQLNCIKAFCYDGTKALSVEKREDKQ 307
Query: 400 NSTV----KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAA 449
D++LLDAPCSG+G +R ++ ++ L+++ + LQ +L A
Sbjct: 308 EEPPFLPESFDRILLDAPCSGMG---QRPNMAYSSTLKEVTSYQPLQRKLFTVA 358
>UNIPROTKB|E2RDT7 [details] [associations]
symbol:NSUN6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002478 InterPro:IPR018314 PROSITE:PS01153
PROSITE:PS50890 Pfam:PF01189 GO:GO:0003723 GO:GO:0008168
GO:GO:0032259 InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 GeneTree:ENSGT00660000095341
OMA:DTEGEPP EMBL:AAEX03001240 RefSeq:XP_003638939.1
ProteinModelPortal:E2RDT7 Ensembl:ENSCAFT00000007127
GeneID:100855876 KEGG:cfa:100855876 NextBio:20860756 Uniprot:E2RDT7
Length = 469
Score = 181 (68.8 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 46/144 (31%), Positives = 81/144 (56%)
Query: 317 VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNE 376
+Q+ + +V V+DPQPG+ I+D CAAPGGKT ++A+ + QG V A+D ++ + +
Sbjct: 218 LQNLPSAVVTHVLDPQPGEKILDLCAAPGGKTTHIAALMRDQGEVIALDKISNKVEKIKQ 277
Query: 377 TAKLHQVNSV-------IRTIHADLRTFADNSTV----KCDKVLLDAPCSGLGVLSKRAD 425
A L +NS+ + + D+ A+ + D++LLDAPCSG+G +R +
Sbjct: 278 NALLLGLNSIKAFCFDGTKALKFDMVEKAEGNPPFLPESFDRILLDAPCSGMG---QRPN 334
Query: 426 LRWNRRLEDMEELKILQDELLDAA 449
+ + L+++ + LQ +L A
Sbjct: 335 MACSWTLKEVTSYQPLQRKLFTVA 358
>TIGR_CMR|SPO_2037 [details] [associations]
symbol:SPO_2037 "NOL1/NOP2/sun family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF01189 EMBL:CP000031 GenomeReviews:CP000031_GR
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000037301 RefSeq:YP_167268.1 ProteinModelPortal:Q5LRT7
GeneID:3193597 KEGG:sil:SPO2037 PATRIC:23377411 OMA:GTRNVQV
ProtClustDB:CLSK933726 Uniprot:Q5LRT7
Length = 391
Score = 177 (67.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 69/247 (27%), Positives = 107/247 (43%)
Query: 208 PLPKLEGNDRAQARALATIYSHPVWMVRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRK 267
P + G D A A I P W+ R+ LG V + P LR N+ +
Sbjct: 99 PEEQAGGRDPAPGAEAADI---PDWLWPRFEASLGARAEAAGQVMQSRAP-VHLRVNTAR 154
Query: 268 GVTRADLVMQL---NLLKVPHELSLHLDEFIRVKTGLQNVIQAGLLKEGLCAVQDESAGL 324
RA + L ++ PH D + V G + + ++ +GL +QD ++
Sbjct: 155 -TDRASAIAALAGEGIVAQPHPAC---DTALEVTEGARGIARSAAYLDGLVELQDAASQA 210
Query: 325 VVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGL-VYAIDINKGRLRILNETAKLHQV 383
+VA + PG ++D CA GGKTL +A+ G+ V+A D R+R L A+ +
Sbjct: 211 IVAALPLAPGMRVLDYCAGGGGKTLALAAV---PGIEVFAHDAAPQRMRDL--PARAARA 265
Query: 384 NSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQD 443
+ +R + D A + D VL DAPCSG G + +W E L +Q
Sbjct: 266 GAQVRLL--DTAEAARMAPF--DLVLADAPCSGSGSWRRAPAGKWELSEEKFAALLAVQR 321
Query: 444 ELLDAAS 450
E+L A+
Sbjct: 322 EILHCAA 328
>UNIPROTKB|F1MC44 [details] [associations]
symbol:NSUN6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008168 "methyltransferase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR002478
InterPro:IPR018314 PROSITE:PS01153 PROSITE:PS50890 Pfam:PF01189
GO:GO:0003723 GO:GO:0008168 GO:GO:0032259 InterPro:IPR015947
SUPFAM:SSF88697 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 GeneTree:ENSGT00660000095341 EMBL:DAAA02035594
EMBL:DAAA02035593 IPI:IPI00839349 UniGene:Bt.16570
Ensembl:ENSBTAT00000029347 OMA:QTCEVIV ArrayExpress:F1MC44
Uniprot:F1MC44
Length = 408
Score = 175 (66.7 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 46/144 (31%), Positives = 78/144 (54%)
Query: 317 VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNE 376
+Q+ + +V V+DPQPG+ I+D CAAPGGKT ++A+ + QG V A+D ++ + +
Sbjct: 218 LQNLPSAVVSHVLDPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIALDKISKKVEKIKQ 277
Query: 377 TAKLHQVNSV-------IRTIHADLRTFADNSTV----KCDKVLLDAPCSGLGVLSKRAD 425
A L +NS+ + + D+ D D++LLDAPCSG+G +R +
Sbjct: 278 NALLLGLNSIRAFCFDGTKALKLDMVKDTDGEPPFLPESFDRILLDAPCSGMG---QRPN 334
Query: 426 LRWNRRLEDMEELKILQDELLDAA 449
+ L+++ + LQ +L A
Sbjct: 335 MACTWTLKEVMSYQPLQRKLFTVA 358
>TIGR_CMR|SO_1575 [details] [associations]
symbol:SO_1575 "NOL1/NOP2/sun family putative RNA
methylase" species:211586 "Shewanella oneidensis MR-1" [GO:0001510
"RNA methylation" evidence=ISS] [GO:0008173 "RNA methyltransferase
activity" evidence=ISS] Pfam:PF01189 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008168 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 KO:K03500 HSSP:O50082
RefSeq:NP_717188.2 ProteinModelPortal:Q8EGM5 GeneID:1169378
KEGG:son:SO_1575 PATRIC:23522792 HOGENOM:HOG000294607 OMA:DAPCSCT
ProtClustDB:CLSK906327 Uniprot:Q8EGM5
Length = 458
Score = 174 (66.3 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 60/207 (28%), Positives = 95/207 (45%)
Query: 254 NSDPSFSLRANSRKGVTRADLVMQLNLLKVPHELSLHLDEFIRVKTGLQNVIQAGLLKEG 313
+S P RA S T V QL L + LS ++ I + + N+ + L KEG
Sbjct: 185 SSRPPIWGRAQSINSQTA---VSQLQALGIEASLSPFFEDAINLGSKSMNLNEITLYKEG 241
Query: 314 LCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSG---------QGLVYAI 364
+QD ++ ++ + P+P Q D C+ GGKTL + S + QG + +
Sbjct: 242 NIEIQDLASQVIGQICAPEPWQHWWDACSGAGGKTLQLRSLMQTAATKQHTPLQGSIVSS 301
Query: 365 DINKGRLRILNETAKLHQVNSV-IRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKR 423
DI L L++ A+ Q + + I +D A N D VL+DAPCS G +
Sbjct: 302 DIRANALEELSKRAQRAQFDGISIARWRSDALPVAANYF---DGVLVDAPCSCTGTWRRN 358
Query: 424 ADLRWNRRLEDMEELKILQDELLDAAS 450
D+RW L+ + + LQ ++L +S
Sbjct: 359 PDMRWLDTLDAVMDKATLQLDILSRSS 385
>UNIPROTKB|Q8TEA1 [details] [associations]
symbol:NSUN6 "Putative methyltransferase NSUN6"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA]
InterPro:IPR002478 InterPro:IPR018314 PROSITE:PS01153
PROSITE:PS50890 Pfam:PF01189 GO:GO:0003723 EMBL:CH471072
GO:GO:0008168 InterPro:IPR015947 SUPFAM:SSF88697 EMBL:AL450384
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000224258 HSSP:Q96P11 EMBL:AK074323 EMBL:EF445003
EMBL:AL512641 EMBL:BC035778 IPI:IPI00152688 RefSeq:NP_872349.1
UniGene:Hs.396175 ProteinModelPortal:Q8TEA1 SMR:Q8TEA1
STRING:Q8TEA1 PhosphoSite:Q8TEA1 DMDM:74751440 PaxDb:Q8TEA1
PeptideAtlas:Q8TEA1 PRIDE:Q8TEA1 DNASU:221078
Ensembl:ENST00000377304 GeneID:221078 KEGG:hsa:221078
UCSC:uc010qcp.1 CTD:221078 GeneCards:GC10M018874 HGNC:HGNC:23529
HPA:HPA045902 neXtProt:NX_Q8TEA1 PharmGKB:PA134986220
HOVERGEN:HBG060395 InParanoid:Q8TEA1 OMA:DTEGEPP OrthoDB:EOG46T31F
PhylomeDB:Q8TEA1 GenomeRNAi:221078 NextBio:91183 Bgee:Q8TEA1
CleanEx:HS_NSUN6 Genevestigator:Q8TEA1 GermOnline:ENSG00000152487
Uniprot:Q8TEA1
Length = 469
Score = 171 (65.3 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 46/144 (31%), Positives = 78/144 (54%)
Query: 317 VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNE 376
+Q+ + LV V++PQPG+ I+D CAAPGGKT ++A+ + QG V A+D ++ + +
Sbjct: 218 LQNLPSALVSHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIALDKIFNKVEKIKQ 277
Query: 377 TAKLHQVNSV-------IRTIHADLRTFADNSTV----KCDKVLLDAPCSGLGVLSKRAD 425
A L +NS+ + + D+ + D++LLDAPCSG+G A
Sbjct: 278 NALLLGLNSIRAFCFDGTKAVKLDMVEDTEGEPPFLPESFDRILLDAPCSGMGQRPNMA- 336
Query: 426 LRWNRRLEDMEELKILQDELLDAA 449
W+ ++++ + LQ +L AA
Sbjct: 337 CTWS--VKEVASYQPLQRKLFTAA 358
>GENEDB_PFALCIPARUM|PFL1475w [details] [associations]
symbol:PFL1475w "sun-family protein, putative"
species:5833 "Plasmodium falciparum" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0008168 "methyltransferase activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
Pfam:PF01189 EMBL:AE014188 GO:GO:0008168 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 RefSeq:XP_001350701.1
ProteinModelPortal:Q8I5B4 EnsemblProtists:PFL1475w:mRNA
GeneID:811347 KEGG:pfa:PFL1475w EuPathDB:PlasmoDB:PF3D7_1230600
HOGENOM:HOG000037301 OMA:AILRHRR ProtClustDB:CLSZ2432952
Uniprot:Q8I5B4
Length = 376
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 61/231 (26%), Positives = 111/231 (48%)
Query: 227 YSHPVWMVRRWTKYLGQEEAIKLM-VWNNSDPSFSLRANSRKGVTRADLVMQLNLLKVPH 285
YS P + + G++++I LM + N P F LR N+ K ++R +L L +
Sbjct: 95 YSFPKELYNQLLDCYGEKKSITLMSILNEKAPVF-LRVNNNK-ISRNELYKTLISKGISV 152
Query: 286 ELSLHLDEFIRVKTG--LQNVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAA 343
E ++ + + L+N+ + K+G +QDE++ +V + + PG ++D CA
Sbjct: 153 EKCVNSPYGLLLTKNQILKNIHE---YKKGYFEIQDEASQIVSSKIPVHPGDKVLDYCAG 209
Query: 344 PGGKTLYMASCLSGQGLVYAIDINKGRL---RILNETAKLHQVNSVIRTIHADLRTFADN 400
GGKTL + + G +Y DI L +I A + Q ++ + H L+
Sbjct: 210 SGGKTLAFSMLMENTGKIYLHDIRDQMLSQAKIRLRRAGI-QNYILLNSNHILLKKLFGY 268
Query: 401 STVKCDKVLLDAPCSGLGVLSKRADLRW---NRRLEDM--EELKILQDELL 446
D V++DAPC+G G L + ++++ N +L D + +I ++ LL
Sbjct: 269 M----DVVIVDAPCTGTGALRRNPEMKYKFTNNKLYDYVKTQREIFENALL 315
>UNIPROTKB|Q8I5B4 [details] [associations]
symbol:PFL1475w "Sun-family protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0008152 "metabolic process"
evidence=ISS] [GO:0008168 "methyltransferase activity"
evidence=ISS] [GO:0032259 "methylation" evidence=ISS] Pfam:PF01189
EMBL:AE014188 GO:GO:0008168 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 RefSeq:XP_001350701.1 ProteinModelPortal:Q8I5B4
EnsemblProtists:PFL1475w:mRNA GeneID:811347 KEGG:pfa:PFL1475w
EuPathDB:PlasmoDB:PF3D7_1230600 HOGENOM:HOG000037301 OMA:AILRHRR
ProtClustDB:CLSZ2432952 Uniprot:Q8I5B4
Length = 376
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 61/231 (26%), Positives = 111/231 (48%)
Query: 227 YSHPVWMVRRWTKYLGQEEAIKLM-VWNNSDPSFSLRANSRKGVTRADLVMQLNLLKVPH 285
YS P + + G++++I LM + N P F LR N+ K ++R +L L +
Sbjct: 95 YSFPKELYNQLLDCYGEKKSITLMSILNEKAPVF-LRVNNNK-ISRNELYKTLISKGISV 152
Query: 286 ELSLHLDEFIRVKTG--LQNVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAA 343
E ++ + + L+N+ + K+G +QDE++ +V + + PG ++D CA
Sbjct: 153 EKCVNSPYGLLLTKNQILKNIHE---YKKGYFEIQDEASQIVSSKIPVHPGDKVLDYCAG 209
Query: 344 PGGKTLYMASCLSGQGLVYAIDINKGRL---RILNETAKLHQVNSVIRTIHADLRTFADN 400
GGKTL + + G +Y DI L +I A + Q ++ + H L+
Sbjct: 210 SGGKTLAFSMLMENTGKIYLHDIRDQMLSQAKIRLRRAGI-QNYILLNSNHILLKKLFGY 268
Query: 401 STVKCDKVLLDAPCSGLGVLSKRADLRW---NRRLEDM--EELKILQDELL 446
D V++DAPC+G G L + ++++ N +L D + +I ++ LL
Sbjct: 269 M----DVVIVDAPCTGTGALRRNPEMKYKFTNNKLYDYVKTQREIFENALL 315
>MGI|MGI:2140844 [details] [associations]
symbol:Nsun5 "NOL1/NOP2/Sun domain family, member 5"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
Pfam:PF01189 MGI:MGI:2140844 GO:GO:0008168 KO:K15264 eggNOG:COG0144
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 HSSP:Q96P11
CTD:55695 HOGENOM:HOG000203203 HOVERGEN:HBG062278 OMA:TLKTCSD
EMBL:AF412029 EMBL:AK079400 EMBL:AK149521 EMBL:AK156651
EMBL:BC051209 IPI:IPI00311260 RefSeq:NP_663389.2 UniGene:Mm.281189
ProteinModelPortal:Q8K4F6 SMR:Q8K4F6 STRING:Q8K4F6 PRIDE:Q8K4F6
DNASU:100609 Ensembl:ENSMUST00000000940 GeneID:100609
KEGG:mmu:100609 UCSC:uc008zyh.1 GeneTree:ENSGT00550000074709
InParanoid:Q8K4F6 OrthoDB:EOG48GW3D NextBio:354548 Bgee:Q8K4F6
CleanEx:MM_NSUN5 Genevestigator:Q8K4F6
GermOnline:ENSMUSG00000000916 Uniprot:Q8K4F6
Length = 465
Score = 169 (64.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 48/157 (30%), Positives = 75/157 (47%)
Query: 271 RADLVMQLNLLKVPHELSLHLDEFIRVKTGLQNVIQAGLLKEGLCAVQDESAGLVVAVVD 330
RA + L LK H L L + V ++ + L + G +QD+++ L ++
Sbjct: 164 RASSLEDLRALKGQHFLLDPLLPELLVFPAQTDLHEHPLYRAGHLILQDKASCLPAMLLS 223
Query: 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTI 390
P PG ++D CAAPG KT Y+A+ L QG ++A D + RL + V S
Sbjct: 224 PPPGSHVIDACAAPGNKTSYIAALLKNQGKIFAFDQDAKRLAAMATLVARAGV-SCCELA 282
Query: 391 HADLRTFA--DNSTVKCDKVLLDAPCSGLGVLSKRAD 425
D T + D + +LLD CSG G+LS++ +
Sbjct: 283 EKDFLTVSPSDQRYSQVQYILLDPSCSGSGMLSRQLE 319
>UNIPROTKB|Q749J3 [details] [associations]
symbol:GSU2749 "NOL1/NOP2/Sun (TRNA and rRNA
cytosine-C5-methyltransferase) family protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF01189 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008168
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000224258 OMA:YSEEVRK RefSeq:NP_953794.1
ProteinModelPortal:Q749J3 GeneID:2685973 KEGG:gsu:GSU2749
PATRIC:22028341 ProtClustDB:CLSK2761235
BioCyc:GSUL243231:GH27-2740-MONOMER Uniprot:Q749J3
Length = 319
Score = 164 (62.8 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 38/106 (35%), Positives = 59/106 (55%)
Query: 311 KEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGR 370
+EG +Q S+ + P+PG++++D AAPGGKT MA+ + +G + A++ +GR
Sbjct: 91 REGRIYIQSLSSMTAPLALAPEPGETVLDLAAAPGGKTAMMAAMMENRGRLSAVEAVRGR 150
Query: 371 LRILNETAKL-HQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCS 415
A L HQ +++RT D R+ D+VLLDAPCS
Sbjct: 151 F--FRMKANLDHQGATMVRTYLTDGRSVGRKCPEMFDRVLLDAPCS 194
>TIGR_CMR|GSU_2749 [details] [associations]
symbol:GSU_2749 "NOL1/NOP2/sun family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF01189 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0008168 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000224258 OMA:YSEEVRK RefSeq:NP_953794.1
ProteinModelPortal:Q749J3 GeneID:2685973 KEGG:gsu:GSU2749
PATRIC:22028341 ProtClustDB:CLSK2761235
BioCyc:GSUL243231:GH27-2740-MONOMER Uniprot:Q749J3
Length = 319
Score = 164 (62.8 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 38/106 (35%), Positives = 59/106 (55%)
Query: 311 KEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGR 370
+EG +Q S+ + P+PG++++D AAPGGKT MA+ + +G + A++ +GR
Sbjct: 91 REGRIYIQSLSSMTAPLALAPEPGETVLDLAAAPGGKTAMMAAMMENRGRLSAVEAVRGR 150
Query: 371 LRILNETAKL-HQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCS 415
A L HQ +++RT D R+ D+VLLDAPCS
Sbjct: 151 F--FRMKANLDHQGATMVRTYLTDGRSVGRKCPEMFDRVLLDAPCS 194
>MGI|MGI:1921705 [details] [associations]
symbol:Nsun6 "NOL1/NOP2/Sun domain family member 6"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008168 "methyltransferase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0032259
"methylation" evidence=IEA] InterPro:IPR002478 PROSITE:PS01153
PROSITE:PS50890 SMART:SM00359 Pfam:PF01189 MGI:MGI:1921705
GO:GO:0003723 GO:GO:0008168 InterPro:IPR015947 SUPFAM:SSF88697
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000224258 GeneTree:ENSGT00660000095341 CTD:221078
HOVERGEN:HBG060395 OMA:DTEGEPP OrthoDB:EOG46T31F EMBL:AK016811
EMBL:AK077778 EMBL:AK132428 EMBL:BC025622 EMBL:BC053751
IPI:IPI00136575 RefSeq:NP_001159413.1 RefSeq:NP_001159415.1
RefSeq:NP_083226.3 UniGene:Mm.478923 ProteinModelPortal:Q7TS68
SMR:Q7TS68 STRING:Q7TS68 PhosphoSite:Q7TS68 PaxDb:Q7TS68
PRIDE:Q7TS68 Ensembl:ENSMUST00000028034 Ensembl:ENSMUST00000076435
GeneID:74455 KEGG:mmu:74455 InParanoid:Q7TS68 ChiTaRS:NSUN6
NextBio:340811 Bgee:Q7TS68 CleanEx:MM_NSUN6 Genevestigator:Q7TS68
GermOnline:ENSMUSG00000026707 Uniprot:Q7TS68
Length = 476
Score = 167 (63.8 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 54/197 (27%), Positives = 95/197 (48%)
Query: 264 NSRKGVTRADLVMQLNLLKVPHELSLHLDEFIRVKTGLQNVIQAGLLKEGLCAVQDESAG 323
N ++R D+ L LK + + + E I + NV+ + + + L +
Sbjct: 174 NGISELSRKDIFNGLPDLK---GIGIRMTEPIYLSPSFDNVLPSYIFLQNLPST------ 224
Query: 324 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKL--- 380
+V V+DPQPG+ I+D CAAPGGKT + A+ + +G V A+D ++ L + A L
Sbjct: 225 VVAHVLDPQPGEKILDMCAAPGGKTTHTAALMQDKGEVIALDKILTKVNKLKQNASLLGL 284
Query: 381 HQVNS----VIRTIHADLRTFADNSTV----KCDKVLLDAPCSGLGVLSKRADLRWNRRL 432
H + + + + D + D+++LDAPCSG+G +R ++ L
Sbjct: 285 HSIRAFCFDATKALKLDTTDGIEGGPPFLPESFDRIILDAPCSGMG---QRPNMACTWTL 341
Query: 433 EDMEELKILQDELLDAA 449
+++ + LQ +LL A
Sbjct: 342 KEVTSYQPLQRKLLHVA 358
>UNIPROTKB|Q8EDY2 [details] [associations]
symbol:rsmF "Ribosomal RNA small subunit methyltransferase
F" species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01579 InterPro:IPR011023 InterPro:IPR023545
PROSITE:PS01153 Pfam:PF01189 GO:GO:0005737 GO:GO:0003723
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
TIGRFAMs:TIGR00446 HSSP:Q96P11 HOGENOM:HOG000218115 KO:K11392
OMA:VANEYSA ProtClustDB:PRK11933 RefSeq:NP_718194.1
ProteinModelPortal:Q8EDY2 SMR:Q8EDY2 GeneID:1170311
KEGG:son:SO_2609 PATRIC:23524845 Uniprot:Q8EDY2
Length = 474
Score = 166 (63.5 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 45/142 (31%), Positives = 73/142 (51%)
Query: 312 EGLCAVQDESAGLV-VAVVDPQPG-QSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKG 369
+GL +Q+ S+ L A+ P Q ++D AAPG KT MA+ ++ QGL+ A + +
Sbjct: 88 QGLFYIQEASSMLPPTALFTPNADWQCVLDLAAAPGSKTTQMAALMNNQGLLVANEYSAS 147
Query: 370 RLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWN 429
R+++L+ L S H D R F + D VL+DAPC G G + K D +
Sbjct: 148 RVKVLHANV-LRMGASHCALTHFDGRVFGEYLYESFDAVLIDAPCGGEGTVRKDVDALKS 206
Query: 430 RRLEDMEELKILQDELLDAASL 451
L+++ + Q L+++A L
Sbjct: 207 WSLDEVIAISETQKALIESAFL 228
>TIGR_CMR|SO_2609 [details] [associations]
symbol:SO_2609 "NOL1/NOP2/sun family protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] HAMAP:MF_01579 InterPro:IPR011023 InterPro:IPR023545
PROSITE:PS01153 Pfam:PF01189 GO:GO:0005737 GO:GO:0003723
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
TIGRFAMs:TIGR00446 HSSP:Q96P11 HOGENOM:HOG000218115 KO:K11392
OMA:VANEYSA ProtClustDB:PRK11933 RefSeq:NP_718194.1
ProteinModelPortal:Q8EDY2 SMR:Q8EDY2 GeneID:1170311
KEGG:son:SO_2609 PATRIC:23524845 Uniprot:Q8EDY2
Length = 474
Score = 166 (63.5 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 45/142 (31%), Positives = 73/142 (51%)
Query: 312 EGLCAVQDESAGLV-VAVVDPQPG-QSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKG 369
+GL +Q+ S+ L A+ P Q ++D AAPG KT MA+ ++ QGL+ A + +
Sbjct: 88 QGLFYIQEASSMLPPTALFTPNADWQCVLDLAAAPGSKTTQMAALMNNQGLLVANEYSAS 147
Query: 370 RLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWN 429
R+++L+ L S H D R F + D VL+DAPC G G + K D +
Sbjct: 148 RVKVLHANV-LRMGASHCALTHFDGRVFGEYLYESFDAVLIDAPCGGEGTVRKDVDALKS 206
Query: 430 RRLEDMEELKILQDELLDAASL 451
L+++ + Q L+++A L
Sbjct: 207 WSLDEVIAISETQKALIESAFL 228
>UNIPROTKB|Q9V106 [details] [associations]
symbol:PYRAB06230 "tRNA
(cytosine(49)-C(5))-methyltransferase" species:272844 "Pyrococcus
abyssi GE5" [GO:0000049 "tRNA binding" evidence=IDA] [GO:0016428
"tRNA (cytosine-5-)-methyltransferase activity" evidence=IDA]
[GO:0030488 "tRNA methylation" evidence=IDA] InterPro:IPR011023
PROSITE:PS01153 Pfam:PF01189 GO:GO:0005737 GO:GO:0000049
EMBL:HE613800 GenomeReviews:AL096836_GR GO:GO:0006364
eggNOG:COG0144 GO:GO:0016428 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 HOGENOM:HOG000224258 TIGRFAMs:TIGR00446
EMBL:AJ248284 PIR:B75183 RefSeq:NP_126314.1 HSSP:O50082
ProteinModelPortal:Q9V106 EnsemblBacteria:EBPYRT00000003778
GeneID:1495530 KEGG:pab:PAB1947 OMA:ENTFDRV ProtClustDB:CLSK541567
Uniprot:Q9V106
Length = 311
Score = 162 (62.1 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 60/194 (30%), Positives = 90/194 (46%)
Query: 233 MVRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRKG---VTRADLVMQLNLLKVPHELSL 289
+V R++K L E ++ PS +R N+ KG +A L + L +P
Sbjct: 14 LVERYSK-LDDSEEFWAYLYKPLRPS--IRINTLKGNLKEIKALLEEKFELEPIPWTKG- 69
Query: 290 HLDEFIRVKTGLQNVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTL 349
E +K+ N Q GL Q+ S+ + V+DP+P + I+D AAPG KT
Sbjct: 70 ---EGFYIKSYDVNYGQLIEYSLGLIIPQEASSMIPPVVLDPKPSEVILDMAAAPGSKTT 126
Query: 350 YMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA-DLRTFADNSTVKCDKV 408
MA + +G + A D + R IL A L + +I + D FA D+V
Sbjct: 127 QMAQYMENEGCIIANDAKRDRANIL--IANLTRAGVLIAKVTVKDGAYFARYENT-FDRV 183
Query: 409 LLDAPCSGLGVLSK 422
LLDAPCS +G++ K
Sbjct: 184 LLDAPCSSVGMIRK 197
>POMBASE|SPAC2C4.06c [details] [associations]
symbol:SPAC2C4.06c "tRNA (cytosine-5-)-methyltransferase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] [GO:0008168
"methyltransferase activity" evidence=IEA] PROSITE:PS01153
PomBase:SPAC2C4.06c Pfam:PF01189 EMBL:CU329670 GO:GO:0005730
GO:GO:0008168 eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 HSSP:Q96P11 HOGENOM:HOG000203203 PIR:T38517
RefSeq:NP_594509.3 STRING:O14039 EnsemblFungi:SPAC2C4.06c.1
GeneID:2542630 OrthoDB:EOG469V3J NextBio:20803679 Uniprot:O14039
Length = 460
Score = 161 (61.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 57/196 (29%), Positives = 97/196 (49%)
Query: 261 LRANSRKGVTRADLVMQLNLLKVP--HELS---LHLDEFIRVKTGLQN---VIQAGLLKE 312
LR N+ K T+ +++ L L KV EL ++D+ + + +++ L KE
Sbjct: 134 LRINTIKS-TKDEVLQGLGLDKVSSIEELGPDKFYIDDCVENLIAIDPSFPIVENSLYKE 192
Query: 313 GLCAVQDESAGLVVAVVDPQPGQ--SIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGR 370
G +QD+++ AV+ G I+D CAAPG KT ++A+C + ++A + + R
Sbjct: 193 GKVIIQDKASCFPAAVLAGLTGHVGDIIDGCAAPGNKTTHLAACFP-KSHIFAFERDAKR 251
Query: 371 LRILNETAKLHQVNSVIRTI-HADLRTFADNSTV--KCDKVLLDAPCSGLGVLSKRADLR 427
++ L + + N+V TI H D S + +LLD CSG G++S++ L
Sbjct: 252 VQTLRKMVGISGANNV--TIEHQDFTLTDPKSDLYRNVTHILLDPSCSGSGIVSRQDYLL 309
Query: 428 WNRR--LEDMEELKIL 441
N + ED E L+ L
Sbjct: 310 GNEQDVTEDTERLENL 325
>UNIPROTKB|Q96P11 [details] [associations]
symbol:NSUN5 "Putative methyltransferase NSUN5"
species:9606 "Homo sapiens" [GO:0008168 "methyltransferase
activity" evidence=IEA] PROSITE:PS01153 Pfam:PF01189 GO:GO:0008168
EMBL:CH471200 EMBL:AC073841 KO:K15264 eggNOG:COG0144
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 EMBL:AF420249
EMBL:AF412028 EMBL:AK001129 EMBL:AK125667 EMBL:AK126375
EMBL:AK298221 EMBL:BC008084 IPI:IPI00101659 IPI:IPI00164154
IPI:IPI00807684 IPI:IPI00902543 IPI:IPI00910694
RefSeq:NP_001161819.1 RefSeq:NP_060514.1 RefSeq:NP_683759.1
UniGene:Hs.647060 PDB:2B9E PDBsum:2B9E ProteinModelPortal:Q96P11
SMR:Q96P11 STRING:Q96P11 DMDM:118573085 PaxDb:Q96P11 PRIDE:Q96P11
DNASU:55695 Ensembl:ENST00000252594 Ensembl:ENST00000310326
Ensembl:ENST00000428206 Ensembl:ENST00000438747
Ensembl:ENST00000570494 Ensembl:ENST00000573847
Ensembl:ENST00000577167 GeneID:55695 KEGG:hsa:55695 UCSC:uc003txv.3
UCSC:uc003txw.3 CTD:55695 GeneCards:GC07M072716 HGNC:HGNC:16385
HPA:HPA020536 neXtProt:NX_Q96P11 PharmGKB:PA134993779
HOGENOM:HOG000203203 HOVERGEN:HBG062278 OMA:TLKTCSD
EvolutionaryTrace:Q96P11 GenomeRNAi:55695 NextBio:60515
ArrayExpress:Q96P11 Bgee:Q96P11 CleanEx:HS_NSUN5
Genevestigator:Q96P11 GermOnline:ENSG00000130305 Uniprot:Q96P11
Length = 429
Score = 158 (60.7 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 46/157 (29%), Positives = 74/157 (47%)
Query: 271 RADLVMQLNLLKVPHELSLHLDEFIRVKTGLQNVIQAGLLKEGLCAVQDESAGLVVAVVD 330
RA + L LK H L L + V ++ + L + G +QD ++ L ++D
Sbjct: 164 RASSLDDLRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLD 223
Query: 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTI 390
P PG ++D CAAPG KT ++A+ L QG ++A D++ RL + T S
Sbjct: 224 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASM-ATLLARAGVSCCELA 282
Query: 391 HADLRTFA--DNSTVKCDKVLLDAPCSGLGVLSKRAD 425
D + D + +LLD CSG G+ S++ +
Sbjct: 283 EEDFLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLE 319
>FB|FBgn0037200 [details] [associations]
symbol:CG11109 species:7227 "Drosophila melanogaster"
[GO:0005730 "nucleolus" evidence=ISS] [GO:0008649 "rRNA
methyltransferase activity" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002478 InterPro:IPR018314 Pfam:PF01472
PROSITE:PS01153 PROSITE:PS50890 SMART:SM00359 Pfam:PF01189
EMBL:AE014296 GO:GO:0003723 GO:GO:0008168 InterPro:IPR015947
SUPFAM:SSF88697 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 GeneTree:ENSGT00660000095341 HSSP:O50082
EMBL:BT046128 RefSeq:NP_730761.1 UniGene:Dm.3802 SMR:Q8IPS4
MINT:MINT-833211 STRING:Q8IPS4 EnsemblMetazoa:FBtr0078552
GeneID:40507 KEGG:dme:Dmel_CG11109 UCSC:CG11109-RB
FlyBase:FBgn0037200 InParanoid:Q8IPS4 OMA:NLPSIVC OrthoDB:EOG4X0K80
GenomeRNAi:40507 NextBio:819100 Uniprot:Q8IPS4
Length = 439
Score = 157 (60.3 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 46/139 (33%), Positives = 74/139 (53%)
Query: 295 IRVKTGLQNVIQAGLL--KEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMA 352
+ +++ + V G L ++GL +Q+ + + V V+DPQPG+ I+D CAAPG KT ++A
Sbjct: 189 VEMQSNVSGVPTLGDLSSEDGL--LQNLPSIVCVRVLDPQPGERILDMCAAPGNKTSHIA 246
Query: 353 SCLSGQGLVYAIDINKGRLRIL------NETAKLHQVNSVIRTIHADLRTFA----DNST 402
+ +G V A+D + R+R + ++ H NS + AD +
Sbjct: 247 ELMGDRGSVVALDNSASRVRSMLPKLGHYKSITAHVFNST-EAVAADAPSAPVGEFTGPP 305
Query: 403 VKC---DKVLLDAPCSGLG 418
C D++LLDAPCSGLG
Sbjct: 306 FPCESFDRILLDAPCSGLG 324
>UNIPROTKB|Q5HVD5 [details] [associations]
symbol:CJE0739 "NOL1/NOP2/sun family protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF01189 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000224258 RefSeq:YP_178750.1 ProteinModelPortal:Q5HVD5
STRING:Q5HVD5 GeneID:3230692 KEGG:cjr:CJE0739 PATRIC:20043207
OMA:YSEEVRK ProtClustDB:CLSK878876
BioCyc:CJEJ195099:GJC0-756-MONOMER Uniprot:Q5HVD5
Length = 279
Score = 152 (58.6 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 38/133 (28%), Positives = 73/133 (54%)
Query: 317 VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNE 376
+Q+ S+ L ++ + GQ ++D CAAPGGK++ +A+ + G + ++++ R IL +
Sbjct: 70 IQNYSSYLCALNLEVKAGQRVLDMCAAPGGKSINLANFMQNTGYLACNEMSRDRFFILQK 129
Query: 377 TAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDME 436
K + VN+ + D + + +K DK+LLDAPCS + DL + ++++
Sbjct: 130 NLKNYGVNA--KVFMKDGKNIGNLCPLKFDKILLDAPCSTFAKIG--FDLE--KSYKEIK 183
Query: 437 ELKILQDELLDAA 449
+ Q +LL +A
Sbjct: 184 NIAKTQKKLLHSA 196
>TIGR_CMR|CJE_0739 [details] [associations]
symbol:CJE_0739 "NOL1/NOP2/sun family protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF01189 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000224258 RefSeq:YP_178750.1 ProteinModelPortal:Q5HVD5
STRING:Q5HVD5 GeneID:3230692 KEGG:cjr:CJE0739 PATRIC:20043207
OMA:YSEEVRK ProtClustDB:CLSK878876
BioCyc:CJEJ195099:GJC0-756-MONOMER Uniprot:Q5HVD5
Length = 279
Score = 152 (58.6 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 38/133 (28%), Positives = 73/133 (54%)
Query: 317 VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNE 376
+Q+ S+ L ++ + GQ ++D CAAPGGK++ +A+ + G + ++++ R IL +
Sbjct: 70 IQNYSSYLCALNLEVKAGQRVLDMCAAPGGKSINLANFMQNTGYLACNEMSRDRFFILQK 129
Query: 377 TAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDME 436
K + VN+ + D + + +K DK+LLDAPCS + DL + ++++
Sbjct: 130 NLKNYGVNA--KVFMKDGKNIGNLCPLKFDKILLDAPCSTFAKIG--FDLE--KSYKEIK 183
Query: 437 ELKILQDELLDAA 449
+ Q +LL +A
Sbjct: 184 NIAKTQKKLLHSA 196
>ZFIN|ZDB-GENE-040426-2476 [details] [associations]
symbol:nsun5 "NOP2/Sun domain family, member 5"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
Pfam:PF01189 ZFIN:ZDB-GENE-040426-2476 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 HOGENOM:HOG000203203
HOVERGEN:HBG062278 HSSP:O50082 EMBL:BC055530 IPI:IPI00837319
UniGene:Dr.78961 ProteinModelPortal:Q7SXM8 SMR:Q7SXM8 STRING:Q7SXM8
PRIDE:Q7SXM8 InParanoid:Q7SXM8 ArrayExpress:Q7SXM8 Bgee:Q7SXM8
Uniprot:Q7SXM8
Length = 483
Score = 156 (60.0 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 42/134 (31%), Positives = 73/134 (54%)
Query: 289 LHLDEFIRVKTGLQNVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKT 348
LHL + + V +G + L K G +QD+++ L +++P G ++D CAAPG KT
Sbjct: 181 LHLKDLL-VFSGKTDFHDHFLYKAGHIILQDKASCLPAFLLNPPVGSHVIDACAAPGNKT 239
Query: 349 LYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHAD-LRTFADNSTVKCDK 407
++A+ + +G ++A D++ RL ++ T L + + + D L+ NS K K
Sbjct: 240 SHLAAIMKNKGKLFAFDLDAKRLSTMS-TLLLRAGVTCHKLANQDFLKVDPQNSEYKEVK 298
Query: 408 -VLLDAPCSGLGVL 420
+LLD CSG G++
Sbjct: 299 YILLDPSCSGSGMV 312
>UNIPROTKB|Q9KRY1 [details] [associations]
symbol:rsmF "Ribosomal RNA small subunit methyltransferase
F" species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_01579
InterPro:IPR011023 InterPro:IPR018314 InterPro:IPR023545
PROSITE:PS01153 Pfam:PF01189 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0031167 GO:GO:0008649
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
TIGRFAMs:TIGR00446 KO:K11392 OMA:VANEYSA ProtClustDB:PRK11933
PIR:A82193 RefSeq:NP_231143.1 ProteinModelPortal:Q9KRY1 SMR:Q9KRY1
DNASU:2614008 GeneID:2614008 KEGG:vch:VC1502 PATRIC:20082060
Uniprot:Q9KRY1
Length = 473
Score = 151 (58.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 40/139 (28%), Positives = 72/139 (51%)
Query: 313 GLCAVQDESAGLVVAVVDPQPGQ--SIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGR 370
GL +Q+ S+ + V+ + S++D AAPG KT MA+ + QG++ A + + R
Sbjct: 93 GLFYIQEASSMMPVSALFMGNAHYDSVLDMAAAPGSKTTQMAALMDNQGVLVANEFSASR 152
Query: 371 LRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNR 430
+++L+ + + + + + D F + D VL+DAPCSG G + K D N
Sbjct: 153 VKVLHANIERCGIRNTALS-NFDGCVFGGWLPERFDAVLIDAPCSGEGTIRKDPDAMKNW 211
Query: 431 RLEDMEELKILQDELLDAA 449
LE ++ + Q L+++A
Sbjct: 212 SLESIQSIANTQKALIESA 230
>TIGR_CMR|VC_1502 [details] [associations]
symbol:VC_1502 "NOL1/NOP2/sun family protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01579 InterPro:IPR011023 InterPro:IPR018314
InterPro:IPR023545 PROSITE:PS01153 Pfam:PF01189 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0031167
GO:GO:0008649 eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 TIGRFAMs:TIGR00446 KO:K11392 OMA:VANEYSA
ProtClustDB:PRK11933 PIR:A82193 RefSeq:NP_231143.1
ProteinModelPortal:Q9KRY1 SMR:Q9KRY1 DNASU:2614008 GeneID:2614008
KEGG:vch:VC1502 PATRIC:20082060 Uniprot:Q9KRY1
Length = 473
Score = 151 (58.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 40/139 (28%), Positives = 72/139 (51%)
Query: 313 GLCAVQDESAGLVVAVVDPQPGQ--SIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGR 370
GL +Q+ S+ + V+ + S++D AAPG KT MA+ + QG++ A + + R
Sbjct: 93 GLFYIQEASSMMPVSALFMGNAHYDSVLDMAAAPGSKTTQMAALMDNQGVLVANEFSASR 152
Query: 371 LRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNR 430
+++L+ + + + + + D F + D VL+DAPCSG G + K D N
Sbjct: 153 VKVLHANIERCGIRNTALS-NFDGCVFGGWLPERFDAVLIDAPCSGEGTIRKDPDAMKNW 211
Query: 431 RLEDMEELKILQDELLDAA 449
LE ++ + Q L+++A
Sbjct: 212 SLESIQSIANTQKALIESA 230
>UNIPROTKB|Q9H649 [details] [associations]
symbol:NSUN3 "Putative methyltransferase NSUN3"
species:9606 "Homo sapiens" [GO:0008168 "methyltransferase
activity" evidence=IEA] PROSITE:PS01153 Pfam:PF01189 GO:GO:0008168
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
CTD:63899 HOGENOM:HOG000017426 HOVERGEN:HBG106892 OMA:NRFNYPF
OrthoDB:EOG4GMTX6 EMBL:AK025762 EMBL:AK026262 EMBL:AF169972
EMBL:BC020602 EMBL:BC057238 EMBL:AF351612 IPI:IPI00004969
RefSeq:NP_071355.1 UniGene:Hs.448003 ProteinModelPortal:Q9H649
SMR:Q9H649 STRING:Q9H649 PhosphoSite:Q9H649 DMDM:74733593
PRIDE:Q9H649 DNASU:63899 Ensembl:ENST00000314622 GeneID:63899
KEGG:hsa:63899 UCSC:uc003drl.1 GeneCards:GC03P093781
HGNC:HGNC:26208 HPA:HPA036181 neXtProt:NX_Q9H649
PharmGKB:PA134961151 InParanoid:Q9H649 PhylomeDB:Q9H649
GenomeRNAi:63899 NextBio:65598 ArrayExpress:Q9H649 Bgee:Q9H649
CleanEx:HS_NSUN3 Genevestigator:Q9H649 Uniprot:Q9H649
Length = 340
Score = 145 (56.1 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 42/130 (32%), Positives = 67/130 (51%)
Query: 324 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAK--LH 381
L V ++ + G+ ++D CAAPGGK++ + C G ++ + + RLR L +T + +
Sbjct: 122 LPVLALELRDGEKVLDLCAAPGGKSIALLQCAC-PGYLHCNEYDSLRLRWLRQTLESFIP 180
Query: 382 Q-VNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSG-LGVLSKRADLRWNRRLEDMEELK 439
Q + +VI+ D R D DKVL+DAPCS L + + R+ L
Sbjct: 181 QPLINVIKVSELDGRKMGDAQPEMFDKVLVDAPCSNDRSWLFSSDSQKASCRISQRRNLP 240
Query: 440 ILQDELLDAA 449
+LQ ELL +A
Sbjct: 241 LLQIELLRSA 250
>TAIR|locus:2009170 [details] [associations]
symbol:AT1G06560 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] InterPro:IPR002478
InterPro:IPR018314 Pfam:PF01472 PROSITE:PS01153 PROSITE:PS50890
SMART:SM00359 Pfam:PF01189 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0003723 GO:GO:0008168 GO:GO:0032259 InterPro:IPR015947
SUPFAM:SSF88697 eggNOG:COG0144 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 HOGENOM:HOG000224258 OMA:DTEGEPP
HSSP:O50082 EMBL:BT006450 EMBL:AK227718 IPI:IPI00527095
RefSeq:NP_172143.3 UniGene:At.48158 UniGene:At.71039
ProteinModelPortal:Q84MA1 SMR:Q84MA1 STRING:Q84MA1 PaxDb:Q84MA1
PRIDE:Q84MA1 EnsemblPlants:AT1G06560.1 GeneID:837167
KEGG:ath:AT1G06560 TAIR:At1g06560 InParanoid:Q84MA1
PhylomeDB:Q84MA1 ProtClustDB:CLSN2680685 Genevestigator:Q84MA1
Uniprot:Q84MA1
Length = 599
Score = 133 (51.9 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 32/127 (25%), Positives = 71/127 (55%)
Query: 255 SDPSFSLRANSRKGVTRADLVMQLNLLKVPHELSLHLDEFIRVKTGLQNVIQAGLLKEGL 314
+DP + R+ G+ A ++ + + +VP+ +++ L+ + L N+++ + + L
Sbjct: 225 TDPYYRERSGLYIGMGTA-MLSRAGMFRVPNGIAVDLNHRVFRLPSLHNILEGEIFLQNL 283
Query: 315 CAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRIL 374
++ +V +DPQ G+ I+D CAAPGGKT +A ++ +G + A D + ++ ++
Sbjct: 284 PSI------IVAHALDPQKGERILDMCAAPGGKTTAIAILMNDEGEIVAADRSHNKVLVV 337
Query: 375 -NETAKL 380
N +A++
Sbjct: 338 QNLSAEM 344
Score = 61 (26.5 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 11/14 (78%), Positives = 13/14 (92%)
Query: 406 DKVLLDAPCSGLGV 419
D+VLLDAPCS LG+
Sbjct: 460 DRVLLDAPCSALGL 473
>UNIPROTKB|Q0P5D8 [details] [associations]
symbol:NSUN3 "Putative methyltransferase NSUN3"
species:9913 "Bos taurus" [GO:0008168 "methyltransferase activity"
evidence=IEA] PROSITE:PS01153 Pfam:PF01189 GO:GO:0008168
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
GeneTree:ENSGT00660000095341 EMBL:BC120181 IPI:IPI00710512
RefSeq:NP_001069469.1 UniGene:Bt.37882 ProteinModelPortal:Q0P5D8
PRIDE:Q0P5D8 Ensembl:ENSBTAT00000020876 GeneID:533791
KEGG:bta:533791 CTD:63899 HOGENOM:HOG000017426 HOVERGEN:HBG106892
InParanoid:Q0P5D8 OMA:NRFNYPF OrthoDB:EOG4GMTX6 NextBio:20876149
Uniprot:Q0P5D8
Length = 338
Score = 144 (55.7 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 45/131 (34%), Positives = 67/131 (51%)
Query: 324 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAK--LH 381
L V ++ + G+ ++D CAAPGGK+L + C + G ++ + + RLR L +T + +
Sbjct: 123 LPVLALELRDGEKVLDLCAAPGGKSLALLQC-AYPGYLHCNEYDSLRLRWLRQTLESFIP 181
Query: 382 Q--VNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSG-LGVLSKRADLRWNRRLEDMEEL 438
Q VN VI+ D R D DKVL+DAPCS L + R+ L
Sbjct: 182 QPLVN-VIKVSELDGREMGDAQPETFDKVLVDAPCSNDRSWLFSSDSQKAACRISQRRNL 240
Query: 439 KILQDELLDAA 449
+LQ ELL +A
Sbjct: 241 PLLQMELLRSA 251
Score = 39 (18.8 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 157 GFYEIVKLDMPPYAVVDENVRLAKVALRPGAGNLVNGILRKLVLLKDNNSLPLPKLEGND 216
G++ +++ +P Y L++ R + G L+K LL + LP+ LE D
Sbjct: 74 GYHSLLQGSLPYYPK-SMKCYLSRTPHRMPSERHQTGNLKKYYLLNAASLLPVLALELRD 132
>MGI|MGI:2146565 [details] [associations]
symbol:Nsun3 "NOL1/NOP2/Sun domain family member 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
PROSITE:PS01153 Pfam:PF01189 MGI:MGI:2146565 GO:GO:0008168
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
GeneTree:ENSGT00660000095341 CTD:63899 HOGENOM:HOG000017426
HOVERGEN:HBG106892 OMA:NRFNYPF OrthoDB:EOG4GMTX6 EMBL:AK032127
EMBL:AK153942 EMBL:AK169841 EMBL:BC125628 EMBL:BC125630
IPI:IPI00228678 IPI:IPI00848884 RefSeq:NP_849256.1 UniGene:Mm.26321
ProteinModelPortal:Q8CCT7 SMR:Q8CCT7 PhosphoSite:Q8CCT7
PRIDE:Q8CCT7 Ensembl:ENSMUST00000063089 GeneID:106338
KEGG:mmu:106338 UCSC:uc007zps.1 InParanoid:Q8CCT7 NextBio:358157
Bgee:Q8CCT7 CleanEx:MM_NSUN3 Genevestigator:Q8CCT7 Uniprot:Q8CCT7
Length = 348
Score = 140 (54.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 46/147 (31%), Positives = 73/147 (49%)
Query: 306 QAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCL-SGQGLVYAI 364
Q G LK+ + + ++ L V ++ + G++++D CAAPGGK++ + C G L
Sbjct: 106 QTGSLKKYY--LLNAASLLPVLALELRDGEAVLDLCAAPGGKSVALLQCAYPGYLLCNEY 163
Query: 365 DINKGR-LRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSG-LGVLSK 422
D +GR LR E+ + +VI+ D R D DKVL+DAPCS L
Sbjct: 164 DRPRGRWLRQTLESFIPQPLINVIKVSELDGREMGDAQPATFDKVLVDAPCSNDRSWLFS 223
Query: 423 RADLRWNRRLEDMEELKILQDELLDAA 449
+ R+ + L +LQ EL+ +A
Sbjct: 224 SDSQKAAYRIHQRKNLPVLQVELVRSA 250
>SGD|S000004967 [details] [associations]
symbol:YNL022C "Putative cytosine 5-methyltransferase"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IDA] [GO:0016428 "tRNA (cytosine-5-)-methyltransferase
activity" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] SGD:S000004967 Pfam:PF01189 GO:GO:0005634
EMBL:BK006947 KO:K03235 RefSeq:NP_014384.3 GeneID:855718
KEGG:sce:YNL014W RefSeq:NP_014376.3 GeneID:855709 KEGG:sce:YNL022C
KO:K15264 eggNOG:COG0144 GO:GO:0016428 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 HOGENOM:HOG000203203
GeneTree:ENSGT00550000074709 OrthoDB:EOG469V3J EMBL:Z71298
PIR:S62934 ProteinModelPortal:P53972 SMR:P53972 IntAct:P53972
MINT:MINT-2491929 STRING:P53972 PaxDb:P53972 PeptideAtlas:P53972
EnsemblFungi:YNL022C CYGD:YNL022c OMA:IQDRASC NextBio:980055
Genevestigator:P53972 GermOnline:YNL022C Uniprot:P53972
Length = 490
Score = 138 (53.6 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 42/161 (26%), Positives = 75/161 (46%)
Query: 288 SLHLDEFIRVKTGLQ--NVIQAG-LLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAP 344
S++ DEFI G+ + I A L K G +QD ++ +++P P ++D C+AP
Sbjct: 194 SIYYDEFIPNLFGIHPSDKITAHELYKHGKIIIQDRASCFPAHILNPGPSDIVIDSCSAP 253
Query: 345 GGKTLYMASCL------SGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA 398
G KT + AS + +YA + + R ++L + K+ + I D A
Sbjct: 254 GNKTTHTASYIYPEPPKDNNTRIYAFEKDPERAKVLQKMIKIAGCSPNISVNVGDFTKLA 313
Query: 399 DNSTVK-CDKVLLDAPCSGLGVLSKRADLRWNRR-LEDMEE 437
K ++D CSG G+ ++ +NRR ++D ++
Sbjct: 314 TPEKYKDVTCFIVDPSCSGSGIFGRKFFDSFNRRKIDDKDD 354
>ZFIN|ZDB-GENE-050706-95 [details] [associations]
symbol:nsun3 "NOP2/Sun domain family, member 3"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] Pfam:PF01189
ZFIN:ZDB-GENE-050706-95 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 GeneTree:ENSGT00660000095341 EMBL:CR762462
EMBL:CU915566 IPI:IPI01023612 Ensembl:ENSDART00000131664
ArrayExpress:F6NJM6 Bgee:F6NJM6 Uniprot:F6NJM6
Length = 375
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 48/171 (28%), Positives = 88/171 (51%)
Query: 283 VPHELSLHLDEFIRVKTGLQNVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCA 342
+P + +H D +R+ T + G LK+ + + ++ L V ++ Q G++++D CA
Sbjct: 126 IPLQCFIHPDP-VRIPTQSHHT---GWLKQYY--LLNAASLLPVLALNVQEGENVLDLCA 179
Query: 343 APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 402
APGGK+L + + GL++ ++++ R L +T + + S+ + L+ T
Sbjct: 180 APGGKSLAILQTAT-PGLLHCNEVDQHRHDWLLKTLESYVPPSLRHLLSVTLQDGRSIGT 238
Query: 403 VK---CDKVLLDAPCSGLGVLSKRADL-RWNRRLEDMEELKILQDELLDAA 449
++ DKVL+DAPCS D R L++ +L +LQ ELL +A
Sbjct: 239 MQPGAYDKVLVDAPCSNDRSWLYTPDTHRGEMWLKERTQLPLLQKELLCSA 289
>ZFIN|ZDB-GENE-041212-77 [details] [associations]
symbol:nsun4 "NOL1/NOP2/Sun domain family, member 4"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] Pfam:PF01189
ZFIN:ZDB-GENE-041212-77 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 HOVERGEN:HBG106892 CTD:387338 EMBL:BC086725
IPI:IPI00495141 RefSeq:NP_001008649.1 UniGene:Dr.5991
ProteinModelPortal:Q5PRB6 GeneID:494106 KEGG:dre:494106
InParanoid:Q5PRB6 NextBio:20865614 ArrayExpress:Q5PRB6
Uniprot:Q5PRB6
Length = 327
Score = 130 (50.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 46/139 (33%), Positives = 71/139 (51%)
Query: 319 DESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDIN---KGRLR-IL 374
D ++ L V +D +PGQ+++D CAAPGGKTL + S L +A D++ GRLR IL
Sbjct: 102 DAASVLPVLALDVRPGQTVLDLCAAPGGKTLALLQAHSVNHL-WANDLSVSRTGRLRKIL 160
Query: 375 NETAK---LHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSG--LGVLSKRADLRWN 429
L + N I I D R D+VL+D PC+ + + ++
Sbjct: 161 QSYVPKECLDEENIHITCI--DGRELGMREEKSFDRVLVDVPCTTDRHSAVVEENNIFKR 218
Query: 430 RRLEDMEELKILQDELLDA 448
R ++ ++L +LQ +LL A
Sbjct: 219 SRTKERQKLPLLQIQLLVA 237
>DICTYBASE|DDB_G0267872 [details] [associations]
symbol:DDB_G0267872 "NOL1/NOP2/Sun family protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0267872 Pfam:PF01189 EMBL:AAFI02000003 KO:K15264
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
RefSeq:XP_647374.1 ProteinModelPortal:Q55G09
EnsemblProtists:DDB0233075 GeneID:8616183 KEGG:ddi:DDB_G0267872
InParanoid:Q55G09 OMA:GDESSQN Uniprot:Q55G09
Length = 680
Score = 129 (50.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 40/141 (28%), Positives = 68/141 (48%)
Query: 309 LLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINK 368
+L G +QD+++ L ++ P PG +D C+APG KT +++ + G ++AI+ +
Sbjct: 232 MLLNGQIILQDKASCLPSFILSPPPGSVCIDSCSAPGNKTSLLSAQMKNTGKIFAIEKDT 291
Query: 369 GRLRILNETAKLHQVNSVIRTIHAD-LRTFADNSTVK-CDKVLLDAPCSGLGVLSKRADL 426
R L + K + I TI+ L D+ K + +L D CSG G+++ R D
Sbjct: 292 KRCGTLIKLTKRSLCKN-IETINDSFLNLKHDDPKFKDVEYILCDPSCSGSGIVN-RLDY 349
Query: 427 RWNRRLEDMEELKILQDELLD 447
+ E + DE LD
Sbjct: 350 LLPTKYSTDEIVTDENDEDLD 370
Score = 48 (22.0 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 11/45 (24%), Positives = 24/45 (53%)
Query: 118 IVGGTIRWRRYLDHLICLLCHDEKTFSSMEPLLLQILRIGFYEIV 162
+V T++++ +D +I L EK F + + +L + YE++
Sbjct: 42 LVCETLKYKGVIDQIIELTAGLEKEFKKNKTIKYSLLVVMIYELL 86
>FB|FBgn0026079 [details] [associations]
symbol:Nsun2 "NOP2-Sun domain family, member 2 ortholog"
species:7227 "Drosophila melanogaster" [GO:0005575
"cellular_component" evidence=ND] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0016428 "tRNA (cytosine-5-)-methyltransferase
activity" evidence=ISS] [GO:0001510 "RNA methylation" evidence=ISS]
[GO:0007614 "short-term memory" evidence=IMP] InterPro:IPR018314
InterPro:IPR023270 PRINTS:PR02011 PROSITE:PS01153 Pfam:PF01189
GO:GO:0005737 GO:GO:0005730 EMBL:AE014298 GO:GO:0007614
GO:GO:0000049 EMBL:AL033125 eggNOG:COG0144
GeneTree:ENSGT00660000095589 GO:GO:0016428 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 HSSP:Q96P11 KO:K15335
EMBL:AY061496 RefSeq:NP_652007.1 UniGene:Dm.3580
ProteinModelPortal:Q9W4M9 SMR:Q9W4M9 MINT:MINT-1331472
STRING:Q9W4M9 PaxDb:Q9W4M9 PRIDE:Q9W4M9 EnsemblMetazoa:FBtr0070669
GeneID:45064 KEGG:dme:Dmel_CG6133 UCSC:CG6133-RA
FlyBase:FBgn0026079 InParanoid:Q9W4M9 OMA:PIEKFYA OrthoDB:EOG44TMPV
PhylomeDB:Q9W4M9 GenomeRNAi:45064 NextBio:837913 Bgee:Q9W4M9
Uniprot:Q9W4M9
Length = 746
Score = 132 (51.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 41/120 (34%), Positives = 55/120 (45%)
Query: 328 VVDPQPGQSIVDCCAAPGGKTLYMASCLSGQ--------GLVYAIDINKGRLRILNETAK 379
V+D +P ++D CAAPG KT + L G V A D++ R +L AK
Sbjct: 171 VLDVRPTDKVLDMCAAPGSKTAQLIEALHAAPEEHKIPPGFVLANDVDNNRCYMLVHQAK 230
Query: 380 LHQVNSVIRTIHAD------LRTFADNST--VKCDKVLLDAPCSGLGVLSKRAD--LRWN 429
++ T H + T D S +K DK+L D PCSG G L K D L+WN
Sbjct: 231 RLNSPCLLVTNHDSSVFPNLVTTKPDGSKAILKFDKILCDVPCSGDGTLRKNPDIWLKWN 290
>UNIPROTKB|F1S3W1 [details] [associations]
symbol:NSUN4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=IEA] Pfam:PF01189 GO:GO:0005762 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 GeneTree:ENSGT00660000095341
OMA:EPKFPAT EMBL:CU694667 RefSeq:XP_003128070.1 UniGene:Ssc.37517
Ensembl:ENSSSCT00000004317 GeneID:100524686 KEGG:ssc:100524686
Uniprot:F1S3W1
Length = 383
Score = 119 (46.9 bits), Expect = 0.00034, P = 0.00034
Identities = 44/143 (30%), Positives = 71/143 (49%)
Query: 317 VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGR----LR 372
+ D ++ L V + QPG +++D CAAPGGKTL M + L A D++ R L+
Sbjct: 156 LMDAASLLPVLALGLQPGDTVLDLCAAPGGKTLAMLQTGCCRNLA-ANDLSTSRTGRLLK 214
Query: 373 ILNETAK--LHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCS-GLGVLSKRADLRWN 429
+L+ + + N V R D R + + D+VL+D PC+ L + + +
Sbjct: 215 VLHSYVPQDVRERNRV-RVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFQ 273
Query: 430 R-RLEDMEELKILQDELLDAASL 451
R R + + L +LQ +LL A L
Sbjct: 274 RSRKRERQMLPVLQVQLLAAGLL 296
>CGD|CAL0003354 [details] [associations]
symbol:orf19.2604 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0003354 Pfam:PF01189 EMBL:AACQ01000044 EMBL:AACQ01000043
KO:K15264 eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 RefSeq:XP_718269.1 RefSeq:XP_718364.1 STRING:Q5A962
GeneID:3640054 GeneID:3640152 KEGG:cal:CaO19.10135
KEGG:cal:CaO19.2604 Uniprot:Q5A962
Length = 498
Score = 123 (48.4 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 38/160 (23%), Positives = 73/160 (45%)
Query: 289 LHLDEFIRVKTGL---QNVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQ---SIVDCCA 342
++ D++I G+ + + + G +QD ++ +++ P ++D CA
Sbjct: 217 IYSDDYIPNLFGVHPREKITSTEAYRLGEIIIQDRASCFPSHILNADPEDVHTQVIDACA 276
Query: 343 APGGKTLYMASCL-SGQGLVYAIDINKGRLRILN---ETAKLHQVNSVIRTIHADLRTFA 398
APG KT + A+ L + +VYA + + R++IL E A +I+ HAD T
Sbjct: 277 APGNKTTHAAAHLPNSDSVVYAFERDSKRVKILKTMCEKATGKTKKKLIQVTHADFTTTK 336
Query: 399 DNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEEL 438
+++D CSG G+ + + N E++E +
Sbjct: 337 PEDFPDVTGLVIDPSCSGSGIFGRALEDSHNE--EEIENV 374
Score = 39 (18.8 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 130 DHLICLLCHDEKTFSS 145
+ L+CLL HD FSS
Sbjct: 110 NELLCLLVHD-LLFSS 124
>UNIPROTKB|Q5A962 [details] [associations]
symbol:CaO19.10135 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] CGD:CAL0003354 Pfam:PF01189 EMBL:AACQ01000044
EMBL:AACQ01000043 KO:K15264 eggNOG:COG0144 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 RefSeq:XP_718269.1
RefSeq:XP_718364.1 STRING:Q5A962 GeneID:3640054 GeneID:3640152
KEGG:cal:CaO19.10135 KEGG:cal:CaO19.2604 Uniprot:Q5A962
Length = 498
Score = 123 (48.4 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 38/160 (23%), Positives = 73/160 (45%)
Query: 289 LHLDEFIRVKTGL---QNVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQ---SIVDCCA 342
++ D++I G+ + + + G +QD ++ +++ P ++D CA
Sbjct: 217 IYSDDYIPNLFGVHPREKITSTEAYRLGEIIIQDRASCFPSHILNADPEDVHTQVIDACA 276
Query: 343 APGGKTLYMASCL-SGQGLVYAIDINKGRLRILN---ETAKLHQVNSVIRTIHADLRTFA 398
APG KT + A+ L + +VYA + + R++IL E A +I+ HAD T
Sbjct: 277 APGNKTTHAAAHLPNSDSVVYAFERDSKRVKILKTMCEKATGKTKKKLIQVTHADFTTTK 336
Query: 399 DNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEEL 438
+++D CSG G+ + + N E++E +
Sbjct: 337 PEDFPDVTGLVIDPSCSGSGIFGRALEDSHNE--EEIENV 374
Score = 39 (18.8 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 130 DHLICLLCHDEKTFSS 145
+ L+CLL HD FSS
Sbjct: 110 NELLCLLVHD-LLFSS 124
>UNIPROTKB|Q0V8R7 [details] [associations]
symbol:NSUN4 "5-methylcytosine rRNA methyltransferase
NSUN4" species:9913 "Bos taurus" [GO:0005762 "mitochondrial large
ribosomal subunit" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
PROSITE:PS01153 Pfam:PF01189 GO:GO:0005762 GO:GO:0008168
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
GeneTree:ENSGT00660000095341 HOGENOM:HOG000017426
HOVERGEN:HBG106892 EMBL:BT026151 EMBL:DY454541 IPI:IPI00706084
RefSeq:NP_001178310.1 UniGene:Bt.36843 ProteinModelPortal:Q0V8R7
PRIDE:Q0V8R7 Ensembl:ENSBTAT00000021120 GeneID:618779
KEGG:bta:618779 CTD:387338 InParanoid:Q0V8R7 OMA:EPKFPAT
OrthoDB:EOG42V8GP NextBio:20901346 Uniprot:Q0V8R7
Length = 384
Score = 116 (45.9 bits), Expect = 0.00072, P = 0.00072
Identities = 41/142 (28%), Positives = 67/142 (47%)
Query: 317 VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNE 376
+ D ++ L V + QPG +++D CAAPGGKTL + + L A D++ R L
Sbjct: 157 LMDAASLLPVLALGLQPGDTVLDLCAAPGGKTLALLQTGCCRNLA-ANDLSTSRTSRLQR 215
Query: 377 TAKLHQVNSV-----IRTIHADLRTFADNSTVKCDKVLLDAPCS-GLGVLSKRADLRWNR 430
+ V +R D R + + D+VL+D PC+ L + + + R
Sbjct: 216 VLHSYVPQDVRDKNRVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENSIFQR 275
Query: 431 -RLEDMEELKILQDELLDAASL 451
R ++ + L +LQ +LL A L
Sbjct: 276 SRKKERQMLPVLQVQLLAAGLL 297
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 451 442 0.00090 118 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 78
No. of states in DFA: 610 (65 KB)
Total size of DFA: 247 KB (2133 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 34.16u 0.12s 34.28t Elapsed: 00:00:01
Total cpu time: 34.17u 0.12s 34.29t Elapsed: 00:00:01
Start: Mon May 20 17:06:20 2013 End: Mon May 20 17:06:21 2013