Query 012998
Match_columns 451
No_of_seqs 409 out of 2728
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 20:17:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012998.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012998hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2yxl_A PH0851 protein, 450AA l 100.0 2E-66 6.8E-71 542.9 36.4 361 57-451 10-377 (450)
2 1sqg_A SUN protein, FMU protei 100.0 1.3E-64 4.3E-69 526.3 34.4 356 59-451 6-362 (429)
3 1ixk_A Methyltransferase; open 100.0 2.5E-44 8.6E-49 359.1 25.8 229 218-450 5-233 (315)
4 2frx_A Hypothetical protein YE 100.0 1.2E-42 4.1E-47 364.8 20.9 223 226-450 5-233 (479)
5 3m6w_A RRNA methylase; rRNA me 100.0 1.5E-41 5.2E-46 353.9 20.5 216 228-451 1-217 (464)
6 3m4x_A NOL1/NOP2/SUN family pr 100.0 1.4E-41 4.7E-46 353.8 16.2 212 227-450 6-221 (456)
7 2b9e_A NOL1/NOP2/SUN domain fa 100.0 5.4E-38 1.8E-42 312.3 21.0 195 254-451 7-223 (309)
8 4fzv_A Putative methyltransfer 100.0 2.4E-34 8.1E-39 290.6 17.3 212 233-450 23-271 (359)
9 3ajd_A Putative methyltransfer 100.0 9.3E-34 3.2E-38 277.0 16.3 194 250-450 2-198 (274)
10 1tzv_A NUSB protein, N utiliza 100.0 2.1E-29 7.2E-34 222.7 12.7 128 58-203 6-135 (142)
11 3d3b_A Protein NUSB, N utiliza 100.0 4.5E-29 1.5E-33 220.4 10.6 127 58-202 9-136 (141)
12 3r2d_A Protein NUSB, N utiliza 100.0 6.2E-29 2.1E-33 221.2 8.9 129 58-203 6-136 (149)
13 1eyv_A NUSB protein, N-utilizi 99.9 7.6E-28 2.6E-32 215.8 8.6 133 57-203 10-143 (156)
14 4dmg_A Putative uncharacterize 99.5 5.6E-14 1.9E-18 143.7 12.1 124 307-450 190-313 (393)
15 1nv8_A HEMK protein; class I a 99.5 3.7E-14 1.2E-18 138.9 8.2 182 231-428 21-215 (284)
16 3lpm_A Putative methyltransfer 99.5 4.5E-13 1.5E-17 128.8 13.4 104 312-417 20-132 (259)
17 2b3t_A Protein methyltransfera 99.4 1.1E-13 3.8E-18 134.4 7.9 114 312-429 86-208 (276)
18 3gdh_A Trimethylguanosine synt 99.4 3.9E-13 1.3E-17 127.2 10.6 117 321-443 66-183 (241)
19 1yb2_A Hypothetical protein TA 99.4 4.9E-14 1.7E-18 136.9 3.8 158 250-414 29-189 (275)
20 1wxx_A TT1595, hypothetical pr 99.4 4.2E-13 1.5E-17 136.7 10.1 122 307-449 187-311 (382)
21 1i1n_A Protein-L-isoaspartate 99.4 2.9E-12 9.8E-17 120.0 14.4 139 269-416 7-163 (226)
22 2as0_A Hypothetical protein PH 99.4 1E-12 3.5E-17 134.4 12.0 105 308-416 194-301 (396)
23 3u81_A Catechol O-methyltransf 99.4 6E-13 2E-17 124.7 8.7 103 315-417 40-147 (221)
24 2qm3_A Predicted methyltransfe 99.4 1.4E-11 4.7E-16 125.0 19.0 197 187-417 41-254 (373)
25 3v97_A Ribosomal RNA large sub 99.4 1E-12 3.4E-17 143.8 9.8 106 308-418 517-623 (703)
26 2igt_A SAM dependent methyltra 99.4 1E-12 3.4E-17 131.5 8.9 108 308-418 127-239 (332)
27 3c0k_A UPF0064 protein YCCW; P 99.4 5.7E-13 1.9E-17 136.3 7.0 106 307-417 197-306 (396)
28 3id6_C Fibrillarin-like rRNA/T 99.3 3.8E-12 1.3E-16 121.0 11.6 82 330-414 73-156 (232)
29 3tfw_A Putative O-methyltransf 99.3 1.5E-12 5E-17 124.6 8.6 99 318-416 48-148 (248)
30 2b78_A Hypothetical protein SM 99.3 1.4E-12 4.8E-17 133.1 8.4 106 308-417 189-298 (385)
31 3dr5_A Putative O-methyltransf 99.3 3.1E-12 1.1E-16 120.6 9.5 87 330-416 53-141 (221)
32 3duw_A OMT, O-methyltransferas 99.3 1.5E-12 5.2E-17 121.7 7.0 99 318-416 43-145 (223)
33 3k6r_A Putative transferase PH 99.3 3.2E-12 1.1E-16 124.6 9.6 85 331-419 123-207 (278)
34 2gpy_A O-methyltransferase; st 99.3 2.5E-12 8.6E-17 121.2 8.4 106 310-416 31-138 (233)
35 3c3y_A Pfomt, O-methyltransfer 99.3 2.8E-12 9.6E-17 121.9 8.5 102 315-416 52-159 (237)
36 3eey_A Putative rRNA methylase 99.3 6.9E-12 2.4E-16 114.8 10.1 85 330-414 19-103 (197)
37 3r3h_A O-methyltransferase, SA 99.3 5.6E-13 1.9E-17 127.3 2.8 103 314-416 41-148 (242)
38 1m6y_A S-adenosyl-methyltransf 99.3 3.7E-12 1.3E-16 125.6 8.8 90 325-417 18-111 (301)
39 3mb5_A SAM-dependent methyltra 99.3 1.1E-11 3.6E-16 118.3 11.6 104 310-415 70-173 (255)
40 4df3_A Fibrillarin-like rRNA/T 99.3 1.2E-11 4.2E-16 117.4 11.3 86 329-417 73-160 (233)
41 3ntv_A MW1564 protein; rossman 99.3 6.2E-12 2.1E-16 118.9 9.2 105 312-417 50-155 (232)
42 3tma_A Methyltransferase; thum 99.3 3E-11 1E-15 121.5 14.8 96 318-415 188-283 (354)
43 3axs_A Probable N(2),N(2)-dime 99.3 5.2E-12 1.8E-16 128.9 9.0 86 332-417 51-138 (392)
44 3tr6_A O-methyltransferase; ce 99.3 3E-12 1E-16 119.7 6.5 101 315-415 46-151 (225)
45 1sui_A Caffeoyl-COA O-methyltr 99.3 5.3E-12 1.8E-16 120.9 8.4 103 314-416 60-168 (247)
46 2dul_A N(2),N(2)-dimethylguano 99.3 5.1E-12 1.7E-16 128.6 8.3 100 318-419 32-146 (378)
47 2ozv_A Hypothetical protein AT 99.3 1E-11 3.4E-16 119.8 9.4 98 320-418 23-129 (260)
48 3p9n_A Possible methyltransfer 99.2 1.9E-11 6.6E-16 111.4 10.2 82 332-416 43-125 (189)
49 2frn_A Hypothetical protein PH 99.2 1.8E-11 6.3E-16 119.1 10.4 95 320-420 114-208 (278)
50 3a27_A TYW2, uncharacterized p 99.2 3.2E-11 1.1E-15 117.1 11.7 83 328-414 114-196 (272)
51 3evz_A Methyltransferase; NYSG 99.2 3E-11 1E-15 113.3 11.1 86 330-419 52-138 (230)
52 3c3p_A Methyltransferase; NP_9 99.2 9.2E-12 3.2E-16 115.5 7.1 99 316-415 39-137 (210)
53 3e05_A Precorrin-6Y C5,15-meth 99.2 6.1E-11 2.1E-15 109.2 12.6 100 312-415 20-119 (204)
54 2esr_A Methyltransferase; stru 99.2 2.9E-11 1E-15 108.6 10.1 83 331-415 29-111 (177)
55 3mti_A RRNA methylase; SAM-dep 99.2 3.3E-11 1.1E-15 109.1 9.7 80 331-414 20-99 (185)
56 3njr_A Precorrin-6Y methylase; 99.2 8E-11 2.7E-15 109.2 12.1 91 318-412 40-130 (204)
57 3lbf_A Protein-L-isoaspartate 99.2 9.7E-11 3.3E-15 108.2 11.9 99 312-415 56-154 (210)
58 2h00_A Methyltransferase 10 do 99.2 6.8E-11 2.3E-15 112.8 10.9 85 333-418 65-154 (254)
59 2fpo_A Methylase YHHF; structu 99.2 5E-11 1.7E-15 110.3 9.6 79 333-414 54-132 (202)
60 1o54_A SAM-dependent O-methylt 99.2 8.8E-11 3E-15 113.8 11.6 92 322-415 101-192 (277)
61 2ift_A Putative methylase HI07 99.2 4.3E-11 1.5E-15 110.7 8.9 80 333-414 53-135 (201)
62 3bt7_A TRNA (uracil-5-)-methyl 99.2 5.5E-11 1.9E-15 120.5 9.7 87 327-418 208-309 (369)
63 1uwv_A 23S rRNA (uracil-5-)-me 99.2 8.1E-11 2.8E-15 121.8 11.0 90 326-419 279-371 (433)
64 2pbf_A Protein-L-isoaspartate 99.2 6.9E-11 2.4E-15 110.6 9.5 92 324-416 69-174 (227)
65 1wy7_A Hypothetical protein PH 99.2 1.2E-10 4.1E-15 107.3 11.0 79 330-416 46-124 (207)
66 3tm4_A TRNA (guanine N2-)-meth 99.2 7.1E-11 2.4E-15 119.9 10.0 90 323-415 208-297 (373)
67 2avd_A Catechol-O-methyltransf 99.1 3.7E-11 1.3E-15 112.5 7.0 101 315-415 51-156 (229)
68 2h1r_A Dimethyladenosine trans 99.1 6.4E-11 2.2E-15 116.7 8.8 97 315-418 24-120 (299)
69 1dl5_A Protein-L-isoaspartate 99.1 1.7E-10 5.9E-15 114.2 11.9 97 320-418 62-158 (317)
70 3fpf_A Mtnas, putative unchara 99.1 1.7E-10 5.8E-15 113.0 11.1 81 328-413 117-197 (298)
71 4dzr_A Protein-(glutamine-N5) 99.1 2.4E-11 8.2E-16 111.7 4.2 87 332-421 29-118 (215)
72 3hm2_A Precorrin-6Y C5,15-meth 99.1 1.6E-10 5.5E-15 103.3 9.3 102 312-416 5-106 (178)
73 2pwy_A TRNA (adenine-N(1)-)-me 99.1 3.2E-10 1.1E-14 107.8 11.7 93 321-415 84-177 (258)
74 1r18_A Protein-L-isoaspartate( 99.1 4.1E-10 1.4E-14 105.6 12.1 97 318-416 67-175 (227)
75 2r6z_A UPF0341 protein in RSP 99.1 3.6E-11 1.2E-15 116.0 4.9 92 322-416 72-173 (258)
76 2fhp_A Methylase, putative; al 99.1 1.9E-10 6.5E-15 103.7 9.3 82 331-414 42-126 (187)
77 3cbg_A O-methyltransferase; cy 99.1 6.8E-11 2.3E-15 111.8 6.5 98 317-414 56-158 (232)
78 2yxd_A Probable cobalt-precorr 99.1 3.9E-10 1.3E-14 100.8 10.6 90 318-413 20-109 (183)
79 1i9g_A Hypothetical protein RV 99.1 4.1E-10 1.4E-14 108.7 11.5 97 317-414 83-181 (280)
80 2b25_A Hypothetical protein; s 99.1 2.8E-10 9.6E-15 113.4 10.3 104 313-416 85-199 (336)
81 3g89_A Ribosomal RNA small sub 99.1 3.6E-10 1.2E-14 108.3 10.3 81 330-412 77-159 (249)
82 4gek_A TRNA (CMO5U34)-methyltr 99.1 3.3E-10 1.1E-14 109.4 10.0 89 318-411 57-146 (261)
83 3ldu_A Putative methylase; str 99.1 3.9E-10 1.3E-14 114.9 11.0 105 308-414 164-311 (385)
84 1nt2_A Fibrillarin-like PRE-rR 99.1 5E-10 1.7E-14 104.5 10.8 80 329-412 53-134 (210)
85 3ldg_A Putative uncharacterize 99.1 5.5E-10 1.9E-14 113.7 11.9 106 308-415 163-311 (384)
86 1dus_A MJ0882; hypothetical pr 99.1 5.3E-10 1.8E-14 100.8 10.5 91 320-415 39-130 (194)
87 2hnk_A SAM-dependent O-methylt 99.1 2E-10 6.7E-15 108.8 7.7 97 317-413 44-156 (239)
88 1jg1_A PIMT;, protein-L-isoasp 99.1 7.1E-10 2.4E-14 104.6 11.4 102 311-416 69-170 (235)
89 2yxe_A Protein-L-isoaspartate 99.1 8.5E-10 2.9E-14 102.1 11.7 100 314-415 58-157 (215)
90 3ll7_A Putative methyltransfer 99.1 1.6E-10 5.6E-15 118.2 7.1 81 333-417 93-176 (410)
91 2yx1_A Hypothetical protein MJ 99.0 3.6E-10 1.2E-14 113.0 9.5 80 332-419 194-273 (336)
92 1xdz_A Methyltransferase GIDB; 99.0 4.6E-10 1.6E-14 106.4 9.7 82 330-413 67-150 (240)
93 4dcm_A Ribosomal RNA large sub 99.0 5.6E-10 1.9E-14 113.4 10.9 96 318-416 207-304 (375)
94 3k0b_A Predicted N6-adenine-sp 99.0 5.4E-10 1.8E-14 114.2 10.6 105 308-414 170-317 (393)
95 1nkv_A Hypothetical protein YJ 99.0 7.8E-10 2.7E-14 105.0 11.1 83 324-410 27-109 (256)
96 1yzh_A TRNA (guanine-N(7)-)-me 99.0 9.6E-10 3.3E-14 102.1 11.4 81 332-414 40-121 (214)
97 1zq9_A Probable dimethyladenos 99.0 6.5E-10 2.2E-14 108.6 10.5 97 315-417 10-106 (285)
98 1xxl_A YCGJ protein; structura 99.0 6.4E-10 2.2E-14 105.1 10.0 91 317-412 5-95 (239)
99 2jjq_A Uncharacterized RNA met 99.0 6.6E-10 2.3E-14 114.7 10.7 80 331-418 288-367 (425)
100 3lec_A NADB-rossmann superfami 99.0 5.6E-10 1.9E-14 105.7 9.2 78 331-410 19-96 (230)
101 1vl5_A Unknown conserved prote 99.0 8.2E-10 2.8E-14 105.4 10.4 99 308-411 12-110 (260)
102 2oyr_A UPF0341 protein YHIQ; a 99.0 3.6E-10 1.2E-14 109.0 7.9 93 321-416 74-176 (258)
103 3gnl_A Uncharacterized protein 99.0 6.5E-10 2.2E-14 106.1 9.6 78 331-410 19-96 (244)
104 1g8a_A Fibrillarin-like PRE-rR 99.0 8.2E-10 2.8E-14 103.4 10.1 81 330-413 70-152 (227)
105 2fca_A TRNA (guanine-N(7)-)-me 99.0 1.3E-09 4.4E-14 101.7 11.2 81 332-414 37-118 (213)
106 2ipx_A RRNA 2'-O-methyltransfe 99.0 1E-09 3.5E-14 103.3 10.6 83 328-413 72-156 (233)
107 3kr9_A SAM-dependent methyltra 99.0 7.7E-10 2.6E-14 104.4 9.4 78 331-410 13-90 (225)
108 3dou_A Ribosomal RNA large sub 99.0 5.8E-10 2E-14 102.5 8.3 74 331-419 23-106 (191)
109 2yvl_A TRMI protein, hypotheti 99.0 2.8E-09 9.6E-14 100.6 12.7 91 319-413 77-167 (248)
110 3dxy_A TRNA (guanine-N(7)-)-me 99.0 1.4E-09 4.8E-14 102.0 10.2 79 333-413 34-114 (218)
111 3dh0_A SAM dependent methyltra 99.0 1.8E-09 6.1E-14 100.0 10.6 88 323-412 27-114 (219)
112 3hem_A Cyclopropane-fatty-acyl 99.0 1.9E-09 6.4E-14 105.5 11.3 82 324-411 63-144 (302)
113 3grz_A L11 mtase, ribosomal pr 99.0 1.5E-09 5E-14 99.9 9.9 88 322-415 47-136 (205)
114 3gru_A Dimethyladenosine trans 99.0 1.4E-09 4.9E-14 106.8 10.2 94 315-415 32-125 (295)
115 3vc1_A Geranyl diphosphate 2-C 99.0 1.3E-09 4.6E-14 107.2 10.1 92 317-411 100-192 (312)
116 3kkz_A Uncharacterized protein 99.0 1.7E-09 5.8E-14 103.7 10.4 83 331-416 44-126 (267)
117 1vbf_A 231AA long hypothetical 99.0 2.1E-09 7.3E-14 100.5 10.8 97 313-416 50-146 (231)
118 1ws6_A Methyltransferase; stru 99.0 8.1E-10 2.8E-14 97.9 7.0 78 333-415 41-121 (171)
119 3f4k_A Putative methyltransfer 99.0 2.3E-09 7.9E-14 101.8 10.7 82 330-414 43-124 (257)
120 1fbn_A MJ fibrillarin homologu 99.0 1.8E-09 6.2E-14 101.6 9.8 83 329-415 70-154 (230)
121 1l3i_A Precorrin-6Y methyltran 98.9 2.6E-09 9E-14 96.0 10.0 93 318-414 18-110 (192)
122 2vdv_E TRNA (guanine-N(7)-)-me 98.9 3.9E-09 1.3E-13 100.3 10.6 83 331-415 47-139 (246)
123 1o9g_A RRNA methyltransferase; 98.9 6.8E-10 2.3E-14 105.7 5.2 88 332-419 50-183 (250)
124 1ne2_A Hypothetical protein TA 98.9 1.9E-09 6.5E-14 98.8 8.1 74 330-415 48-121 (200)
125 3bus_A REBM, methyltransferase 98.9 4.1E-09 1.4E-13 101.1 10.6 87 322-411 50-136 (273)
126 2xvm_A Tellurite resistance pr 98.9 7.1E-09 2.4E-13 94.1 11.3 85 323-413 22-106 (199)
127 3dlc_A Putative S-adenosyl-L-m 98.9 4.3E-09 1.5E-13 96.8 9.7 87 323-413 34-120 (219)
128 3bkx_A SAM-dependent methyltra 98.9 4E-09 1.4E-13 101.2 9.7 95 318-413 28-131 (275)
129 3dmg_A Probable ribosomal RNA 98.9 4E-09 1.4E-13 107.3 10.2 80 332-417 232-311 (381)
130 2bm8_A Cephalosporin hydroxyla 98.9 6.9E-10 2.4E-14 105.4 4.1 86 322-413 70-161 (236)
131 3tqs_A Ribosomal RNA small sub 98.9 4.2E-09 1.4E-13 101.3 8.9 88 321-415 17-107 (255)
132 2plw_A Ribosomal RNA methyltra 98.9 5.6E-09 1.9E-13 95.4 9.3 77 331-419 20-121 (201)
133 2f8l_A Hypothetical protein LM 98.9 3.4E-09 1.2E-13 106.1 8.4 82 330-415 127-212 (344)
134 2ar0_A M.ecoki, type I restric 98.9 3.2E-09 1.1E-13 112.8 8.7 108 312-419 148-276 (541)
135 1kpg_A CFA synthase;, cyclopro 98.9 8.7E-09 3E-13 99.7 10.9 82 324-411 55-136 (287)
136 1qam_A ERMC' methyltransferase 98.9 8.8E-09 3E-13 98.2 10.7 95 315-416 12-106 (244)
137 2fk8_A Methoxy mycolic acid sy 98.9 8.7E-09 3E-13 101.4 10.8 82 324-411 81-162 (318)
138 2okc_A Type I restriction enzy 98.9 2.7E-09 9.3E-14 110.7 7.5 107 312-420 150-269 (445)
139 1inl_A Spermidine synthase; be 98.9 3.3E-09 1.1E-13 104.2 7.6 85 333-418 90-177 (296)
140 1jsx_A Glucose-inhibited divis 98.8 7.7E-09 2.6E-13 94.9 9.6 75 333-411 65-139 (207)
141 2o57_A Putative sarcosine dime 98.8 8.8E-09 3E-13 100.2 10.3 86 323-411 68-157 (297)
142 3q87_B N6 adenine specific DNA 98.8 2E-09 6.8E-14 96.7 5.3 82 319-416 7-90 (170)
143 3orh_A Guanidinoacetate N-meth 98.8 4.6E-09 1.6E-13 99.5 8.0 85 331-419 58-143 (236)
144 3ocj_A Putative exported prote 98.8 2.9E-09 9.8E-14 104.5 6.4 82 330-413 115-196 (305)
145 3v97_A Ribosomal RNA large sub 98.8 1.1E-08 3.7E-13 111.9 11.0 107 308-414 159-313 (703)
146 3jwh_A HEN1; methyltransferase 98.8 1E-08 3.5E-13 95.0 9.3 86 324-411 20-109 (217)
147 3fut_A Dimethyladenosine trans 98.8 1.1E-08 3.7E-13 99.4 9.7 87 322-416 36-122 (271)
148 1ej0_A FTSJ; methyltransferase 98.8 8.4E-09 2.9E-13 91.1 8.3 77 331-419 20-103 (180)
149 3gu3_A Methyltransferase; alph 98.8 7.8E-09 2.7E-13 100.3 8.7 87 323-413 12-98 (284)
150 1yub_A Ermam, rRNA methyltrans 98.8 6.9E-10 2.4E-14 105.8 1.1 97 315-418 11-107 (245)
151 3g5t_A Trans-aconitate 3-methy 98.8 1.9E-08 6.4E-13 98.2 11.2 81 332-412 35-121 (299)
152 1zx0_A Guanidinoacetate N-meth 98.8 9.2E-09 3.1E-13 96.9 8.7 77 331-411 58-135 (236)
153 1mjf_A Spermidine synthase; sp 98.8 4.7E-09 1.6E-13 102.2 6.8 80 332-415 74-163 (281)
154 3uwp_A Histone-lysine N-methyl 98.8 1E-08 3.6E-13 104.4 9.5 89 325-414 165-262 (438)
155 2pjd_A Ribosomal RNA small sub 98.8 9.1E-09 3.1E-13 103.0 8.8 91 319-415 182-272 (343)
156 4htf_A S-adenosylmethionine-de 98.8 1.4E-08 4.7E-13 98.3 9.8 77 333-412 68-144 (285)
157 3mgg_A Methyltransferase; NYSG 98.8 2.2E-08 7.5E-13 96.2 11.2 84 326-412 30-113 (276)
158 3fzg_A 16S rRNA methylase; met 98.8 8.4E-09 2.9E-13 94.5 7.7 74 332-410 48-121 (200)
159 3q7e_A Protein arginine N-meth 98.8 1.2E-08 4.1E-13 102.4 9.3 82 330-415 63-144 (349)
160 3jwg_A HEN1, methyltransferase 98.8 1.1E-08 3.6E-13 95.0 8.2 86 324-411 20-109 (219)
161 3m70_A Tellurite resistance pr 98.8 1.7E-08 6E-13 97.6 10.1 82 326-414 113-194 (286)
162 3r0q_C Probable protein argini 98.8 2.1E-08 7.2E-13 101.7 10.8 81 328-413 58-138 (376)
163 1pjz_A Thiopurine S-methyltran 98.8 4.9E-09 1.7E-13 96.9 5.3 78 329-410 18-107 (203)
164 3ofk_A Nodulation protein S; N 98.8 8E-09 2.8E-13 95.5 6.7 83 321-411 39-121 (216)
165 2fyt_A Protein arginine N-meth 98.8 2.3E-08 7.8E-13 100.1 10.4 84 326-413 57-140 (340)
166 1g6q_1 HnRNP arginine N-methyl 98.8 1.8E-08 6E-13 100.3 9.5 84 329-416 34-117 (328)
167 2ih2_A Modification methylase 98.8 6.2E-09 2.1E-13 106.4 6.3 95 313-419 19-113 (421)
168 3adn_A Spermidine synthase; am 98.8 1.1E-08 3.8E-13 100.4 7.9 82 332-414 82-167 (294)
169 2y1w_A Histone-arginine methyl 98.8 3E-08 1E-12 99.4 11.1 85 326-415 43-127 (348)
170 1wg8_A Predicted S-adenosylmet 98.8 9.1E-09 3.1E-13 99.6 6.9 84 325-416 14-101 (285)
171 3ckk_A TRNA (guanine-N(7)-)-me 98.7 2E-08 6.8E-13 95.3 9.1 82 331-414 44-133 (235)
172 3p2e_A 16S rRNA methylase; met 98.7 1.1E-08 3.7E-13 96.4 7.0 81 331-413 22-106 (225)
173 2kw5_A SLR1183 protein; struct 98.7 2.9E-08 9.8E-13 90.7 9.5 73 331-410 28-100 (202)
174 1ri5_A MRNA capping enzyme; me 98.7 3E-08 1E-12 95.9 10.1 80 331-412 62-141 (298)
175 3dtn_A Putative methyltransfer 98.7 3.2E-08 1.1E-12 92.6 9.9 77 331-413 42-118 (234)
176 3ujc_A Phosphoethanolamine N-m 98.7 2.3E-08 7.7E-13 95.0 8.9 82 324-411 46-127 (266)
177 3g07_A 7SK snRNA methylphospha 98.7 2.3E-08 7.8E-13 97.7 8.8 50 333-383 46-95 (292)
178 4hc4_A Protein arginine N-meth 98.7 2.6E-08 9E-13 100.9 9.4 77 332-413 82-158 (376)
179 2o07_A Spermidine synthase; st 98.7 1.8E-08 6.3E-13 99.3 8.0 82 332-414 94-178 (304)
180 3lkd_A Type I restriction-modi 98.7 3.1E-08 1E-12 105.1 10.1 105 313-417 197-310 (542)
181 3b3j_A Histone-arginine methyl 98.7 3.1E-08 1.1E-12 103.7 9.7 81 328-413 153-233 (480)
182 1iy9_A Spermidine synthase; ro 98.7 2.2E-08 7.6E-13 97.2 8.0 81 333-414 75-158 (275)
183 3tka_A Ribosomal RNA small sub 98.7 1.1E-08 3.7E-13 101.2 5.8 89 325-418 49-142 (347)
184 2gb4_A Thiopurine S-methyltran 98.7 4.2E-08 1.4E-12 94.1 9.8 78 330-410 65-158 (252)
185 2nyu_A Putative ribosomal RNA 98.7 4.9E-08 1.7E-12 88.6 9.8 77 331-419 20-112 (196)
186 3uzu_A Ribosomal RNA small sub 98.7 3.6E-08 1.2E-12 96.0 9.4 91 321-416 30-126 (279)
187 3iv6_A Putative Zn-dependent a 98.7 2.1E-08 7.3E-13 96.7 7.7 85 323-413 35-119 (261)
188 4fsd_A Arsenic methyltransfera 98.7 3.5E-08 1.2E-12 100.2 9.7 84 330-413 80-175 (383)
189 2nxc_A L11 mtase, ribosomal pr 98.7 3.7E-08 1.3E-12 94.3 9.0 77 331-414 118-194 (254)
190 1ve3_A Hypothetical protein PH 98.7 5.1E-08 1.8E-12 90.4 9.7 76 332-413 37-112 (227)
191 2p35_A Trans-aconitate 2-methy 98.7 4.2E-08 1.4E-12 93.0 8.9 84 320-412 20-103 (259)
192 3ou2_A SAM-dependent methyltra 98.7 6.8E-08 2.3E-12 88.9 10.0 72 330-411 43-114 (218)
193 1u2z_A Histone-lysine N-methyl 98.7 6.2E-08 2.1E-12 99.8 10.5 88 326-414 235-333 (433)
194 2p41_A Type II methyltransfera 98.7 4.4E-09 1.5E-13 103.8 1.9 78 331-419 80-162 (305)
195 1wzn_A SAM-dependent methyltra 98.7 7.9E-08 2.7E-12 90.9 10.4 74 330-410 38-111 (252)
196 3m33_A Uncharacterized protein 98.7 4.9E-08 1.7E-12 91.3 8.8 72 331-411 46-118 (226)
197 3khk_A Type I restriction-modi 98.7 1.7E-08 5.9E-13 107.1 6.2 105 312-417 224-342 (544)
198 2pt6_A Spermidine synthase; tr 98.7 2.3E-08 7.7E-13 99.4 6.5 82 332-414 115-199 (321)
199 2b2c_A Spermidine synthase; be 98.6 2.5E-08 8.7E-13 98.7 6.8 82 332-414 107-191 (314)
200 2yqz_A Hypothetical protein TT 98.6 7E-08 2.4E-12 91.5 9.2 76 330-411 36-111 (263)
201 3ftd_A Dimethyladenosine trans 98.6 4E-08 1.4E-12 94.1 7.5 92 317-416 15-107 (249)
202 1xj5_A Spermidine synthase 1; 98.6 4.6E-08 1.6E-12 97.7 8.0 82 331-413 118-203 (334)
203 2ex4_A Adrenal gland protein A 98.6 4.6E-08 1.6E-12 92.2 7.6 76 332-411 78-153 (241)
204 3mq2_A 16S rRNA methyltransfer 98.6 3.4E-08 1.2E-12 91.5 6.5 83 327-413 21-107 (218)
205 3g2m_A PCZA361.24; SAM-depende 98.6 6.1E-08 2.1E-12 94.5 8.5 80 325-410 75-156 (299)
206 3sm3_A SAM-dependent methyltra 98.6 1E-07 3.5E-12 88.5 9.6 78 331-412 28-109 (235)
207 3g5l_A Putative S-adenosylmeth 98.6 1.1E-07 3.8E-12 90.0 9.8 80 326-412 37-116 (253)
208 3ccf_A Cyclopropane-fatty-acyl 98.6 7.4E-08 2.5E-12 92.9 8.4 81 321-412 45-125 (279)
209 3bzb_A Uncharacterized protein 98.6 9.9E-08 3.4E-12 92.7 9.2 82 331-414 77-174 (281)
210 3bwc_A Spermidine synthase; SA 98.6 7.8E-08 2.7E-12 94.7 8.5 82 332-414 94-179 (304)
211 2i7c_A Spermidine synthase; tr 98.6 6.7E-08 2.3E-12 94.2 7.9 82 332-414 77-161 (283)
212 3hnr_A Probable methyltransfer 98.6 5.4E-08 1.8E-12 90.0 6.9 76 327-412 39-114 (220)
213 1xtp_A LMAJ004091AAA; SGPP, st 98.6 1.4E-07 4.8E-12 89.1 9.5 79 327-411 87-165 (254)
214 1uir_A Polyamine aminopropyltr 98.6 8.6E-08 2.9E-12 94.8 8.0 83 332-415 76-162 (314)
215 2pxx_A Uncharacterized protein 98.6 1.1E-07 3.9E-12 87.0 8.3 77 332-414 41-117 (215)
216 3lcc_A Putative methyl chlorid 98.6 4.8E-08 1.6E-12 91.6 5.9 73 334-411 67-139 (235)
217 3htx_A HEN1; HEN1, small RNA m 98.6 1.1E-07 3.6E-12 104.0 8.9 84 325-410 713-802 (950)
218 3ege_A Putative methyltransfer 98.6 6.8E-08 2.3E-12 92.4 6.5 81 322-413 23-103 (261)
219 1y8c_A S-adenosylmethionine-de 98.5 1.6E-07 5.5E-12 87.8 8.7 73 333-412 37-109 (246)
220 3bkw_A MLL3908 protein, S-aden 98.5 1.9E-07 6.6E-12 87.4 9.1 82 324-412 34-115 (243)
221 4azs_A Methyltransferase WBDD; 98.5 1.5E-07 5.2E-12 100.5 9.2 80 333-422 66-146 (569)
222 3cvo_A Methyltransferase-like 98.5 1.8E-07 6E-12 86.7 8.3 78 332-413 29-131 (202)
223 3thr_A Glycine N-methyltransfe 98.5 1.8E-07 6.1E-12 90.6 8.4 85 323-410 47-136 (293)
224 2r3s_A Uncharacterized protein 98.5 2.1E-07 7.1E-12 92.0 8.9 83 324-410 154-238 (335)
225 3gjy_A Spermidine synthase; AP 98.5 1.6E-07 5.4E-12 93.0 7.9 79 335-415 91-170 (317)
226 3d2l_A SAM-dependent methyltra 98.5 2.4E-07 8.3E-12 86.7 8.8 73 332-412 32-104 (243)
227 1qyr_A KSGA, high level kasuga 98.5 1.2E-07 4E-12 91.0 6.7 89 322-416 10-102 (252)
228 2p8j_A S-adenosylmethionine-de 98.5 2.1E-07 7.1E-12 85.2 8.1 77 330-411 20-96 (209)
229 2p7i_A Hypothetical protein; p 98.5 1.7E-07 5.7E-12 87.7 7.6 71 331-411 40-110 (250)
230 3cgg_A SAM-dependent methyltra 98.5 3E-07 1E-11 82.6 9.0 74 331-414 44-117 (195)
231 2vdw_A Vaccinia virus capping 98.5 3.1E-07 1.1E-11 90.3 9.7 77 332-410 47-135 (302)
232 3e23_A Uncharacterized protein 98.5 2.4E-07 8.3E-12 85.2 8.4 71 330-412 40-110 (211)
233 1qzz_A RDMB, aclacinomycin-10- 98.5 4.4E-07 1.5E-11 91.2 10.8 84 323-411 172-255 (374)
234 2wa2_A Non-structural protein 98.5 2.6E-08 9E-13 96.9 1.5 75 331-413 80-157 (276)
235 3h2b_A SAM-dependent methyltra 98.5 2.9E-07 9.9E-12 84.0 8.4 68 334-411 42-109 (203)
236 3i9f_A Putative type 11 methyl 98.5 2E-07 6.8E-12 82.6 6.8 75 326-413 10-84 (170)
237 2oxt_A Nucleoside-2'-O-methylt 98.5 4E-08 1.4E-12 95.0 2.3 73 331-413 72-149 (265)
238 3l8d_A Methyltransferase; stru 98.5 3.6E-07 1.2E-11 85.5 8.6 73 331-411 51-123 (242)
239 2qfm_A Spermine synthase; sper 98.4 2.4E-07 8.2E-12 93.0 7.3 80 333-414 188-277 (364)
240 2xyq_A Putative 2'-O-methyl tr 98.4 2.4E-07 8.2E-12 90.7 7.0 74 329-420 59-139 (290)
241 3dli_A Methyltransferase; PSI- 98.4 3.2E-07 1.1E-11 86.3 7.4 69 331-411 39-108 (240)
242 3mcz_A O-methyltransferase; ad 98.4 6.2E-07 2.1E-11 89.4 9.8 82 327-410 172-254 (352)
243 4hg2_A Methyltransferase type 98.4 1.6E-07 5.6E-12 90.2 4.9 67 333-410 39-105 (257)
244 3pfg_A N-methyltransferase; N, 98.4 3E-07 1E-11 87.6 6.8 69 332-411 49-117 (263)
245 3ufb_A Type I restriction-modi 98.4 6.8E-07 2.3E-11 94.6 9.8 105 312-417 196-315 (530)
246 1x19_A CRTF-related protein; m 98.4 7.3E-07 2.5E-11 89.3 9.3 84 323-411 180-263 (359)
247 3e8s_A Putative SAM dependent 98.4 3.3E-07 1.1E-11 84.5 6.1 77 327-413 46-125 (227)
248 2aot_A HMT, histamine N-methyl 98.4 6.5E-07 2.2E-11 87.0 8.4 80 331-410 50-141 (292)
249 3bgv_A MRNA CAP guanine-N7 met 98.4 1E-06 3.5E-11 86.4 9.8 77 332-411 33-121 (313)
250 1tw3_A COMT, carminomycin 4-O- 98.4 8.7E-07 3E-11 88.6 9.3 83 324-411 174-256 (360)
251 3ggd_A SAM-dependent methyltra 98.4 6.1E-07 2.1E-11 84.4 7.7 77 331-414 54-134 (245)
252 3frh_A 16S rRNA methylase; met 98.3 1.1E-06 3.9E-11 83.2 9.0 72 332-411 104-175 (253)
253 2gs9_A Hypothetical protein TT 98.3 1E-06 3.4E-11 80.9 7.7 68 333-412 36-103 (211)
254 3bxo_A N,N-dimethyltransferase 98.3 1.2E-06 4.2E-11 81.6 8.4 68 332-410 39-106 (239)
255 1p91_A Ribosomal RNA large sub 98.3 1.1E-06 3.9E-11 83.8 8.3 72 332-411 84-155 (269)
256 2a14_A Indolethylamine N-methy 98.3 2.5E-07 8.4E-12 88.8 3.6 80 330-411 52-163 (263)
257 4auk_A Ribosomal RNA large sub 98.3 5E-07 1.7E-11 90.7 5.8 78 331-420 209-286 (375)
258 3gwz_A MMCR; methyltransferase 98.3 1.4E-06 4.8E-11 87.8 9.3 81 325-410 194-274 (369)
259 3i53_A O-methyltransferase; CO 98.3 2E-06 6.8E-11 85.1 10.2 78 328-410 164-241 (332)
260 2cmg_A Spermidine synthase; tr 98.3 3.8E-07 1.3E-11 87.9 4.7 74 333-413 72-148 (262)
261 3s1s_A Restriction endonucleas 98.3 9.3E-07 3.2E-11 96.4 7.9 85 332-417 320-412 (878)
262 2ip2_A Probable phenazine-spec 98.3 7.4E-07 2.5E-11 88.2 6.6 81 325-411 160-240 (334)
263 3dp7_A SAM-dependent methyltra 98.3 2.1E-06 7E-11 86.4 9.9 76 332-410 178-254 (363)
264 2i62_A Nicotinamide N-methyltr 98.3 3.3E-07 1.1E-11 87.0 3.6 80 330-411 53-164 (265)
265 2avn_A Ubiquinone/menaquinone 98.3 2E-06 6.8E-11 82.0 8.5 69 333-412 54-122 (260)
266 3lcv_B Sisomicin-gentamicin re 98.2 1.3E-06 4.4E-11 83.7 6.2 73 333-410 132-204 (281)
267 3cc8_A Putative methyltransfer 98.2 2E-06 6.8E-11 79.3 7.4 70 332-412 31-101 (230)
268 2px2_A Genome polyprotein [con 98.2 2.5E-07 8.7E-12 87.8 0.4 76 331-419 71-153 (269)
269 1af7_A Chemotaxis receptor met 98.1 3.8E-06 1.3E-10 81.4 7.7 78 333-410 105-219 (274)
270 3hp7_A Hemolysin, putative; st 98.1 4.2E-06 1.4E-10 81.8 7.1 78 333-417 85-164 (291)
271 2g72_A Phenylethanolamine N-me 98.1 4.3E-06 1.5E-10 80.9 6.6 78 332-411 70-181 (289)
272 3opn_A Putative hemolysin; str 98.1 1.7E-06 5.7E-11 81.8 3.5 78 333-417 37-116 (232)
273 3p8z_A Mtase, non-structural p 98.0 8E-06 2.7E-10 76.5 7.3 81 331-417 76-158 (267)
274 3sso_A Methyltransferase; macr 98.0 4.5E-06 1.5E-10 84.8 6.0 70 333-412 216-296 (419)
275 2qe6_A Uncharacterized protein 98.0 1.8E-05 6.1E-10 76.5 10.0 75 333-411 77-164 (274)
276 3giw_A Protein of unknown func 97.9 7.7E-06 2.6E-10 79.1 5.8 63 334-397 79-143 (277)
277 2qy6_A UPF0209 protein YFCK; s 97.9 2.9E-05 9.9E-10 74.5 9.7 82 331-412 58-181 (257)
278 4e2x_A TCAB9; kijanose, tetron 97.9 4.4E-06 1.5E-10 85.3 3.8 78 326-411 100-178 (416)
279 2c7p_A Modification methylase 97.9 3.5E-05 1.2E-09 76.5 10.0 81 334-424 11-91 (327)
280 2oo3_A Protein involved in cat 97.9 3.6E-06 1.2E-10 81.4 2.6 77 333-415 91-170 (283)
281 1vlm_A SAM-dependent methyltra 97.9 1E-05 3.5E-10 74.8 5.1 64 333-412 47-110 (219)
282 3g7u_A Cytosine-specific methy 97.9 2.5E-05 8.5E-10 79.1 8.3 81 335-423 3-90 (376)
283 2wk1_A NOVP; transferase, O-me 97.9 3.1E-05 1.1E-09 75.3 8.3 81 333-413 106-218 (282)
284 1g55_A DNA cytosine methyltran 97.8 1.9E-05 6.5E-10 78.9 6.8 83 335-423 3-87 (343)
285 3lst_A CALO1 methyltransferase 97.8 1.3E-05 4.6E-10 79.8 5.5 79 324-410 175-253 (348)
286 4gqb_A Protein arginine N-meth 97.7 5E-05 1.7E-09 81.5 8.4 77 334-413 358-437 (637)
287 2zfu_A Nucleomethylin, cerebra 97.7 1.7E-05 5.8E-10 72.9 3.4 64 325-411 59-122 (215)
288 3gcz_A Polyprotein; flavivirus 97.5 3.2E-05 1.1E-09 74.5 2.1 82 331-419 88-170 (282)
289 3ua3_A Protein arginine N-meth 97.5 0.00013 4.5E-09 78.5 6.6 79 334-413 410-504 (745)
290 4a6d_A Hydroxyindole O-methylt 97.4 0.00017 6E-09 72.0 7.2 80 325-410 171-250 (353)
291 3lkz_A Non-structural protein 97.4 0.00012 4E-09 70.8 5.4 81 331-418 92-173 (321)
292 3o4f_A Spermidine synthase; am 97.4 0.00033 1.1E-08 68.3 8.7 80 334-414 84-167 (294)
293 1fp2_A Isoflavone O-methyltran 97.4 0.00017 5.8E-09 71.8 6.3 67 331-410 186-252 (352)
294 2k4m_A TR8_protein, UPF0146 pr 97.4 9.7E-05 3.3E-09 64.4 3.7 64 332-413 34-99 (153)
295 1fp1_D Isoliquiritigenin 2'-O- 97.3 0.00026 8.8E-09 71.1 6.6 67 331-410 207-273 (372)
296 3evf_A RNA-directed RNA polyme 97.3 4.9E-05 1.7E-09 73.1 1.0 83 331-419 72-154 (277)
297 3eld_A Methyltransferase; flav 97.3 6.5E-05 2.2E-09 72.8 1.5 81 332-419 80-161 (300)
298 3reo_A (ISO)eugenol O-methyltr 97.2 0.00032 1.1E-08 70.5 6.1 67 331-410 201-267 (368)
299 2zig_A TTHA0409, putative modi 97.2 0.00074 2.5E-08 65.8 8.5 59 332-394 234-292 (297)
300 3p9c_A Caffeic acid O-methyltr 97.2 0.00039 1.3E-08 69.8 6.2 67 331-410 199-265 (364)
301 3ubt_Y Modification methylase 97.1 0.00085 2.9E-08 66.0 8.1 80 335-423 1-80 (331)
302 1i4w_A Mitochondrial replicati 97.1 0.00094 3.2E-08 66.8 7.7 81 313-398 31-118 (353)
303 2qrv_A DNA (cytosine-5)-methyl 97.0 0.0018 6.2E-08 63.2 9.2 83 332-421 14-100 (295)
304 3qv2_A 5-cytosine DNA methyltr 97.0 0.00065 2.2E-08 67.3 5.9 76 334-417 10-89 (327)
305 1zg3_A Isoflavanone 4'-O-methy 97.0 0.00068 2.3E-08 67.5 6.0 68 331-411 191-258 (358)
306 2py6_A Methyltransferase FKBM; 97.0 0.002 6.8E-08 65.8 9.0 66 328-393 221-290 (409)
307 4h0n_A DNMT2; SAH binding, tra 96.9 0.00084 2.9E-08 66.7 6.0 80 336-422 5-87 (333)
308 2ld4_A Anamorsin; methyltransf 96.9 0.00031 1.1E-08 62.3 2.1 60 329-410 8-69 (176)
309 3c6k_A Spermine synthase; sper 96.8 0.0017 5.8E-08 65.4 6.7 79 333-413 205-293 (381)
310 1g60_A Adenine-specific methyl 96.8 0.0018 6.1E-08 61.8 6.5 49 332-383 211-259 (260)
311 3me5_A Cytosine-specific methy 96.6 0.0023 8E-08 66.6 6.8 84 334-422 88-187 (482)
312 3r24_A NSP16, 2'-O-methyl tran 96.5 0.0049 1.7E-07 59.5 7.4 73 329-419 105-184 (344)
313 4dkj_A Cytosine-specific methy 95.5 0.022 7.4E-07 57.9 7.2 90 335-424 11-145 (403)
314 3swr_A DNA (cytosine-5)-methyl 94.7 0.084 2.9E-06 59.4 9.6 81 334-422 540-636 (1002)
315 3pvc_A TRNA 5-methylaminomethy 94.0 0.046 1.6E-06 59.2 5.5 98 333-438 58-197 (689)
316 4ft4_B DNA (cytosine-5)-methyl 93.8 0.15 5E-06 56.1 9.1 46 333-378 211-260 (784)
317 1boo_A Protein (N-4 cytosine-s 93.8 0.063 2.1E-06 52.7 5.4 64 331-399 250-313 (323)
318 1eg2_A Modification methylase 93.5 0.087 3E-06 51.7 6.0 49 331-382 240-291 (319)
319 3s2e_A Zinc-containing alcohol 93.4 0.12 4.1E-06 50.6 6.8 79 328-412 161-240 (340)
320 3av4_A DNA (cytosine-5)-methyl 93.2 0.18 6.1E-06 58.4 8.5 81 334-422 851-947 (1330)
321 1f8f_A Benzyl alcohol dehydrog 92.1 0.22 7.5E-06 49.4 6.7 53 328-385 185-238 (371)
322 1pl8_A Human sorbitol dehydrog 92.0 0.22 7.4E-06 49.2 6.5 54 327-385 165-219 (356)
323 3two_A Mannitol dehydrogenase; 91.4 0.37 1.3E-05 47.3 7.3 68 329-410 172-240 (348)
324 4ej6_A Putative zinc-binding d 91.3 0.29 9.8E-06 48.7 6.5 83 327-417 176-263 (370)
325 3fpc_A NADP-dependent alcohol 91.0 0.22 7.6E-06 49.0 5.3 54 327-385 160-214 (352)
326 1uuf_A YAHK, zinc-type alcohol 90.4 0.52 1.8E-05 46.7 7.5 51 329-385 190-241 (369)
327 3jv7_A ADH-A; dehydrogenase, n 90.0 0.35 1.2E-05 47.3 5.7 51 330-385 168-219 (345)
328 2dph_A Formaldehyde dismutase; 89.8 0.41 1.4E-05 48.0 6.2 51 328-383 180-231 (398)
329 1e3j_A NADP(H)-dependent ketos 89.7 0.53 1.8E-05 46.2 6.8 53 327-385 162-215 (352)
330 3uko_A Alcohol dehydrogenase c 89.2 0.36 1.2E-05 48.0 5.1 54 327-385 187-241 (378)
331 1piw_A Hypothetical zinc-type 88.9 0.46 1.6E-05 46.9 5.7 51 329-385 175-226 (360)
332 3vyw_A MNMC2; tRNA wobble urid 88.2 2.3 7.7E-05 41.4 9.9 98 334-439 97-213 (308)
333 4eez_A Alcohol dehydrogenase 1 87.9 1.1 3.9E-05 43.5 7.8 80 328-412 158-240 (348)
334 1kol_A Formaldehyde dehydrogen 87.7 0.86 2.9E-05 45.5 6.8 51 329-384 181-232 (398)
335 3gms_A Putative NADPH:quinone 86.8 0.5 1.7E-05 46.1 4.4 53 327-385 138-192 (340)
336 1rjw_A ADH-HT, alcohol dehydro 86.3 0.8 2.7E-05 44.7 5.6 50 329-384 160-210 (339)
337 3goh_A Alcohol dehydrogenase, 85.7 0.72 2.5E-05 44.4 4.9 51 327-384 136-187 (315)
338 3tos_A CALS11; methyltransfera 85.2 1.9 6.6E-05 40.7 7.4 80 334-413 70-191 (257)
339 3ip1_A Alcohol dehydrogenase, 85.0 0.91 3.1E-05 45.5 5.4 51 330-385 210-261 (404)
340 4dvj_A Putative zinc-dependent 84.6 0.86 2.9E-05 45.0 4.9 48 333-385 171-220 (363)
341 3ps9_A TRNA 5-methylaminomethy 83.6 2.9 9.8E-05 44.8 8.8 99 333-439 66-206 (676)
342 4a2c_A Galactitol-1-phosphate 83.1 1.7 5.9E-05 42.1 6.3 54 327-385 154-208 (346)
343 4fs3_A Enoyl-[acyl-carrier-pro 82.3 5.4 0.00019 37.0 9.2 85 333-418 5-100 (256)
344 3m6i_A L-arabinitol 4-dehydrog 81.9 2 6.8E-05 42.1 6.3 50 327-377 173-223 (363)
345 1p0f_A NADP-dependent alcohol 81.8 1.7 5.9E-05 42.8 5.8 53 328-385 186-239 (373)
346 3ic5_A Putative saccharopine d 81.8 3.3 0.00011 32.7 6.6 70 334-413 5-78 (118)
347 3tjr_A Short chain dehydrogena 81.4 3.6 0.00012 39.2 7.8 82 333-417 30-121 (301)
348 1e3i_A Alcohol dehydrogenase, 81.3 1.9 6.5E-05 42.5 5.9 53 328-385 190-243 (376)
349 1cdo_A Alcohol dehydrogenase; 81.2 2 7E-05 42.3 6.1 53 328-385 187-240 (374)
350 2h6e_A ADH-4, D-arabinose 1-de 80.9 2.4 8.2E-05 41.2 6.4 51 330-385 168-219 (344)
351 2jhf_A Alcohol dehydrogenase E 80.8 2.1 7.3E-05 42.1 6.1 53 328-385 186-239 (374)
352 3o26_A Salutaridine reductase; 80.8 3.5 0.00012 38.8 7.5 82 333-416 11-103 (311)
353 3uog_A Alcohol dehydrogenase; 80.7 2.4 8.1E-05 41.7 6.4 52 328-385 184-236 (363)
354 2fzw_A Alcohol dehydrogenase c 80.7 2 6.9E-05 42.3 5.8 53 328-385 185-238 (373)
355 2efj_A 3,7-dimethylxanthine me 80.3 3.6 0.00012 41.2 7.5 74 334-411 53-156 (384)
356 3fbg_A Putative arginate lyase 80.2 2 6.7E-05 41.9 5.5 47 333-385 150-198 (346)
357 2c0c_A Zinc binding alcohol de 80.0 2.7 9.3E-05 41.3 6.6 51 329-385 159-211 (362)
358 4b7c_A Probable oxidoreductase 79.9 2.1 7.1E-05 41.5 5.6 53 327-384 143-197 (336)
359 2c07_A 3-oxoacyl-(acyl-carrier 79.7 7.8 0.00027 36.3 9.5 79 334-415 44-132 (285)
360 1fmc_A 7 alpha-hydroxysteroid 79.7 5.5 0.00019 36.3 8.2 80 333-415 10-99 (255)
361 1jvb_A NAD(H)-dependent alcoho 79.6 2.4 8.2E-05 41.3 5.9 51 329-384 166-218 (347)
362 1vj0_A Alcohol dehydrogenase, 79.1 1.8 6.1E-05 43.0 4.9 52 329-385 190-243 (380)
363 1pqw_A Polyketide synthase; ro 78.5 2.2 7.5E-05 37.7 4.8 51 328-384 33-85 (198)
364 3jyn_A Quinone oxidoreductase; 77.6 2.2 7.7E-05 41.1 5.0 51 329-385 136-188 (325)
365 3qwb_A Probable quinone oxidor 77.4 2.5 8.4E-05 40.9 5.2 50 329-384 144-195 (334)
366 2cf5_A Atccad5, CAD, cinnamyl 76.7 4.8 0.00016 39.4 7.1 52 329-385 175-228 (357)
367 4eye_A Probable oxidoreductase 76.1 2.4 8.2E-05 41.3 4.8 52 328-385 154-207 (342)
368 1m6e_X S-adenosyl-L-methionnin 75.1 0.86 2.9E-05 45.3 1.2 77 335-411 53-146 (359)
369 1xa0_A Putative NADPH dependen 74.8 2.6 8.9E-05 40.6 4.6 51 329-385 144-197 (328)
370 3t4x_A Oxidoreductase, short c 74.5 14 0.00047 34.2 9.5 83 333-416 9-97 (267)
371 3lyl_A 3-oxoacyl-(acyl-carrier 74.0 17 0.00059 32.8 9.9 80 334-416 5-94 (247)
372 1xg5_A ARPG836; short chain de 73.9 16 0.00056 33.8 9.9 79 334-413 32-120 (279)
373 4g81_D Putative hexonate dehyd 73.8 12 0.0004 35.1 8.7 79 333-414 8-96 (255)
374 3rku_A Oxidoreductase YMR226C; 73.6 10 0.00035 35.8 8.5 79 334-413 33-124 (287)
375 1y1p_A ARII, aldehyde reductas 73.6 18 0.00062 34.1 10.3 82 333-416 10-95 (342)
376 3fwz_A Inner membrane protein 73.5 3.4 0.00012 34.5 4.5 71 334-414 7-81 (140)
377 1ae1_A Tropinone reductase-I; 73.3 13 0.00043 34.6 8.9 80 333-415 20-110 (273)
378 1iz0_A Quinone oxidoreductase; 73.3 2.3 8E-05 40.5 3.8 49 331-385 123-173 (302)
379 4dup_A Quinone oxidoreductase; 73.2 3.4 0.00012 40.3 5.0 52 328-385 162-215 (353)
380 3rih_A Short chain dehydrogena 73.1 6.9 0.00024 37.2 7.1 81 333-415 40-130 (293)
381 3o38_A Short chain dehydrogena 72.1 14 0.00049 33.9 8.9 83 333-417 21-114 (266)
382 3krt_A Crotonyl COA reductase; 71.9 3.1 0.00011 42.3 4.5 51 329-385 224-276 (456)
383 3llv_A Exopolyphosphatase-rela 71.8 7.7 0.00026 32.0 6.3 70 334-413 6-79 (141)
384 3h7a_A Short chain dehydrogena 71.8 7.4 0.00025 35.8 6.8 83 333-418 6-97 (252)
385 3iup_A Putative NADPH:quinone 71.5 2 6.8E-05 42.6 2.9 48 332-385 169-219 (379)
386 3nx4_A Putative oxidoreductase 71.2 4 0.00014 39.1 5.0 50 330-385 142-194 (324)
387 3nzo_A UDP-N-acetylglucosamine 71.0 18 0.00061 35.8 9.9 81 334-415 35-123 (399)
388 3ioy_A Short-chain dehydrogena 70.8 15 0.00051 35.2 9.0 81 333-414 7-97 (319)
389 2b5w_A Glucose dehydrogenase; 70.7 4.8 0.00016 39.3 5.4 51 329-384 162-224 (357)
390 3ius_A Uncharacterized conserv 70.7 15 0.00052 33.8 8.8 67 335-414 6-73 (286)
391 3sju_A Keto reductase; short-c 70.3 13 0.00046 34.6 8.4 84 333-419 23-116 (279)
392 3r1i_A Short-chain type dehydr 70.1 13 0.00043 34.9 8.1 82 333-417 31-122 (276)
393 2d8a_A PH0655, probable L-thre 70.0 5.7 0.00019 38.6 5.8 51 328-384 163-214 (348)
394 2eih_A Alcohol dehydrogenase; 69.6 8.1 0.00028 37.3 6.8 50 329-384 162-213 (343)
395 3ucx_A Short chain dehydrogena 69.5 21 0.00072 32.8 9.5 77 333-412 10-96 (264)
396 1lss_A TRK system potassium up 69.4 10 0.00035 30.7 6.5 71 334-413 4-78 (140)
397 1h2b_A Alcohol dehydrogenase; 68.8 7.7 0.00026 37.9 6.5 52 329-385 182-234 (359)
398 1xu9_A Corticosteroid 11-beta- 68.6 16 0.00054 34.1 8.4 76 334-411 28-113 (286)
399 4da9_A Short-chain dehydrogena 68.5 17 0.00057 34.0 8.6 79 333-414 28-117 (280)
400 2ae2_A Protein (tropinone redu 68.3 17 0.00059 33.3 8.5 80 333-415 8-98 (260)
401 3awd_A GOX2181, putative polyo 67.7 22 0.00074 32.3 9.1 78 333-413 12-99 (260)
402 4a0s_A Octenoyl-COA reductase/ 67.7 4.4 0.00015 40.9 4.6 51 329-385 216-268 (447)
403 1ja9_A 4HNR, 1,3,6,8-tetrahydr 67.6 10 0.00035 34.8 6.8 80 333-415 20-110 (274)
404 3oj0_A Glutr, glutamyl-tRNA re 67.3 14 0.00047 30.7 7.0 50 326-377 13-63 (144)
405 4fn4_A Short chain dehydrogena 67.0 17 0.00058 34.0 8.2 78 333-413 6-93 (254)
406 3pk0_A Short-chain dehydrogena 66.9 14 0.00048 34.1 7.6 81 333-415 9-99 (262)
407 4ibo_A Gluconate dehydrogenase 66.5 18 0.00061 33.7 8.3 81 333-416 25-115 (271)
408 1tt7_A YHFP; alcohol dehydroge 66.5 3.6 0.00012 39.6 3.5 51 329-385 145-198 (330)
409 2hcy_A Alcohol dehydrogenase 1 66.4 7 0.00024 37.9 5.6 50 329-384 165-216 (347)
410 3rkr_A Short chain oxidoreduct 66.1 18 0.00063 33.2 8.3 79 333-414 28-116 (262)
411 2hq1_A Glucose/ribitol dehydro 65.8 12 0.00042 33.7 6.9 79 334-415 5-94 (247)
412 3qiv_A Short-chain dehydrogena 65.4 37 0.0012 30.7 10.1 79 333-414 8-96 (253)
413 2rhc_B Actinorhodin polyketide 65.4 30 0.001 32.0 9.7 80 333-415 21-110 (277)
414 3czc_A RMPB; alpha/beta sandwi 64.9 9.5 0.00033 30.8 5.2 66 329-415 13-78 (110)
415 3afn_B Carbonyl reductase; alp 64.9 9.8 0.00034 34.5 6.0 78 334-414 7-95 (258)
416 1yb1_A 17-beta-hydroxysteroid 64.8 26 0.00089 32.3 9.1 80 333-415 30-119 (272)
417 3lf2_A Short chain oxidoreduct 64.7 26 0.00088 32.3 9.0 81 334-416 8-99 (265)
418 2jah_A Clavulanic acid dehydro 64.5 26 0.00091 31.8 8.9 78 334-414 7-94 (247)
419 2cfc_A 2-(R)-hydroxypropyl-COM 64.2 11 0.00038 34.1 6.3 78 334-414 2-90 (250)
420 1mxh_A Pteridine reductase 2; 64.0 29 0.001 31.9 9.3 80 334-416 11-106 (276)
421 2dq4_A L-threonine 3-dehydroge 64.0 4.4 0.00015 39.3 3.5 47 328-376 160-207 (343)
422 2j3h_A NADP-dependent oxidored 63.6 8 0.00027 37.3 5.4 52 328-384 150-203 (345)
423 3t8y_A CHEB, chemotaxis respon 63.3 6.4 0.00022 33.2 4.1 74 342-416 9-83 (164)
424 3grk_A Enoyl-(acyl-carrier-pro 63.2 20 0.0007 33.7 8.1 79 333-414 30-119 (293)
425 3tfo_A Putative 3-oxoacyl-(acy 63.1 22 0.00074 33.0 8.2 79 334-415 4-92 (264)
426 3ftp_A 3-oxoacyl-[acyl-carrier 62.9 19 0.00066 33.4 7.8 83 333-418 27-119 (270)
427 3imf_A Short chain dehydrogena 62.7 18 0.00062 33.1 7.5 78 334-414 6-93 (257)
428 2uvd_A 3-oxoacyl-(acyl-carrier 62.6 26 0.00089 31.7 8.5 79 334-415 4-93 (246)
429 1v3u_A Leukotriene B4 12- hydr 62.3 9.9 0.00034 36.5 5.8 44 329-374 141-186 (333)
430 3gaf_A 7-alpha-hydroxysteroid 62.1 23 0.00078 32.5 8.1 81 333-416 11-101 (256)
431 3b5i_A S-adenosyl-L-methionine 61.6 5 0.00017 40.0 3.5 46 334-379 53-112 (374)
432 2b4q_A Rhamnolipids biosynthes 61.5 27 0.00093 32.4 8.6 80 333-416 28-117 (276)
433 1edo_A Beta-keto acyl carrier 61.4 26 0.00089 31.4 8.2 79 335-416 2-91 (244)
434 3svt_A Short-chain type dehydr 61.3 31 0.0011 31.9 9.0 81 333-414 10-101 (281)
435 1zsy_A Mitochondrial 2-enoyl t 61.3 9.5 0.00032 37.1 5.5 55 329-385 163-219 (357)
436 3rd5_A Mypaa.01249.C; ssgcid, 61.2 13 0.00046 34.8 6.4 76 333-414 15-96 (291)
437 2aef_A Calcium-gated potassium 61.2 19 0.00067 32.4 7.3 69 333-412 8-79 (234)
438 3tqh_A Quinone oxidoreductase; 61.2 12 0.0004 35.8 6.0 52 327-385 146-199 (321)
439 1xq1_A Putative tropinone redu 61.2 24 0.00081 32.2 8.0 77 334-413 14-101 (266)
440 3dqp_A Oxidoreductase YLBE; al 61.2 15 0.0005 32.6 6.4 70 336-416 2-75 (219)
441 3l77_A Short-chain alcohol deh 60.9 46 0.0016 29.6 9.8 79 334-415 2-91 (235)
442 2gn4_A FLAA1 protein, UDP-GLCN 60.7 11 0.00037 36.5 5.7 77 333-414 20-101 (344)
443 3cxt_A Dehydrogenase with diff 60.6 34 0.0012 32.1 9.2 79 333-414 33-121 (291)
444 4g65_A TRK system potassium up 60.5 12 0.0004 38.3 6.1 68 334-410 3-74 (461)
445 1xhl_A Short-chain dehydrogena 60.4 44 0.0015 31.3 10.0 81 333-414 25-116 (297)
446 1geg_A Acetoin reductase; SDR 60.1 43 0.0015 30.4 9.6 77 335-414 3-89 (256)
447 3to5_A CHEY homolog; alpha(5)b 59.7 8.5 0.00029 32.2 4.1 66 354-421 8-77 (134)
448 3oec_A Carveol dehydrogenase ( 59.7 32 0.0011 32.7 8.9 83 333-418 45-149 (317)
449 4egf_A L-xylulose reductase; s 59.6 29 0.00099 32.0 8.3 81 333-416 19-110 (266)
450 3ai3_A NADPH-sorbose reductase 59.5 36 0.0012 31.1 8.9 79 334-415 7-96 (263)
451 1zem_A Xylitol dehydrogenase; 59.5 32 0.0011 31.5 8.6 80 333-415 6-95 (262)
452 3gqv_A Enoyl reductase; medium 59.4 8.6 0.00029 37.7 4.8 47 332-385 163-211 (371)
453 1wma_A Carbonyl reductase [NAD 59.2 21 0.00071 32.4 7.2 80 333-415 3-93 (276)
454 3v8b_A Putative dehydrogenase, 59.2 31 0.0011 32.2 8.6 80 333-415 27-116 (283)
455 1vl8_A Gluconate 5-dehydrogena 59.0 40 0.0014 31.0 9.2 80 333-415 20-110 (267)
456 3enk_A UDP-glucose 4-epimerase 58.6 4.8 0.00016 38.4 2.7 82 334-417 5-91 (341)
457 1yqd_A Sinapyl alcohol dehydro 58.5 12 0.00039 36.7 5.5 51 329-384 182-234 (366)
458 3tsc_A Putative oxidoreductase 58.4 37 0.0013 31.4 8.9 81 333-416 10-113 (277)
459 1iy8_A Levodione reductase; ox 58.1 37 0.0013 31.1 8.8 79 334-413 13-101 (267)
460 3h2s_A Putative NADH-flavin re 58.0 17 0.00059 32.0 6.3 69 336-413 2-71 (224)
461 1wly_A CAAR, 2-haloacrylate re 58.0 18 0.00061 34.7 6.7 50 329-384 141-192 (333)
462 3pgx_A Carveol dehydrogenase; 57.9 28 0.00097 32.2 8.0 81 333-416 14-117 (280)
463 2zig_A TTHA0409, putative modi 57.6 10 0.00034 36.1 4.8 32 386-417 21-53 (297)
464 2qxy_A Response regulator; reg 57.6 19 0.00065 28.9 6.0 55 358-416 4-59 (142)
465 2wsb_A Galactitol dehydrogenas 57.4 32 0.0011 30.9 8.1 80 333-418 10-99 (254)
466 2pnf_A 3-oxoacyl-[acyl-carrier 56.9 30 0.001 31.0 7.8 79 334-415 7-96 (248)
467 2ph3_A 3-oxoacyl-[acyl carrier 56.9 28 0.00094 31.2 7.5 78 336-416 3-92 (245)
468 4dzz_A Plasmid partitioning pr 56.5 6.4 0.00022 34.5 3.0 77 336-416 2-87 (206)
469 1id1_A Putative potassium chan 56.2 26 0.00089 29.2 6.8 73 334-413 3-80 (153)
470 1yb5_A Quinone oxidoreductase; 56.2 15 0.0005 35.7 5.8 51 328-384 165-217 (351)
471 4a27_A Synaptic vesicle membra 56.0 8.1 0.00028 37.5 3.9 51 328-385 137-189 (349)
472 1gu7_A Enoyl-[acyl-carrier-pro 55.9 8.8 0.0003 37.4 4.1 55 329-385 162-219 (364)
473 1w6u_A 2,4-dienoyl-COA reducta 55.7 52 0.0018 30.5 9.5 80 333-415 25-115 (302)
474 3sx2_A Putative 3-ketoacyl-(ac 55.5 36 0.0012 31.3 8.3 79 333-414 12-112 (278)
475 3snk_A Response regulator CHEY 55.4 25 0.00086 28.0 6.4 53 358-413 14-68 (135)
476 2yut_A Putative short-chain ox 55.4 17 0.00056 31.7 5.6 71 336-415 2-77 (207)
477 4imr_A 3-oxoacyl-(acyl-carrier 55.3 32 0.0011 31.9 7.9 80 333-415 32-120 (275)
478 4eso_A Putative oxidoreductase 55.1 28 0.00097 31.8 7.4 80 333-418 7-96 (255)
479 2vn8_A Reticulon-4-interacting 54.9 17 0.00058 35.5 6.1 48 331-385 181-230 (375)
480 4ina_A Saccharopine dehydrogen 54.8 24 0.00083 35.1 7.3 75 336-413 3-85 (405)
481 2z5l_A Tylkr1, tylactone synth 54.7 19 0.00066 37.2 6.7 85 331-418 256-349 (511)
482 1gee_A Glucose 1-dehydrogenase 54.4 30 0.001 31.3 7.4 79 334-415 7-96 (261)
483 3oig_A Enoyl-[acyl-carrier-pro 54.3 20 0.00069 32.8 6.2 83 333-416 6-99 (266)
484 3pxx_A Carveol dehydrogenase; 54.2 49 0.0017 30.4 9.0 81 333-416 9-111 (287)
485 3guy_A Short-chain dehydrogena 54.1 22 0.00075 31.8 6.3 73 336-414 3-82 (230)
486 3v2h_A D-beta-hydroxybutyrate 53.9 52 0.0018 30.5 9.2 83 334-418 25-118 (281)
487 1yxm_A Pecra, peroxisomal tran 53.9 49 0.0017 30.7 9.0 79 333-414 17-110 (303)
488 3nbm_A PTS system, lactose-spe 53.8 16 0.00054 29.6 4.6 58 333-413 5-62 (108)
489 3o8q_A Shikimate 5-dehydrogena 53.7 60 0.0021 30.6 9.5 68 333-411 125-194 (281)
490 3oid_A Enoyl-[acyl-carrier-pro 53.5 42 0.0014 30.7 8.3 79 333-414 3-92 (258)
491 4iin_A 3-ketoacyl-acyl carrier 53.3 43 0.0015 30.7 8.4 81 333-416 28-119 (271)
492 3lua_A Response regulator rece 52.9 29 0.001 27.7 6.4 55 358-415 4-61 (140)
493 1lnq_A MTHK channels, potassiu 52.8 12 0.00043 35.9 4.6 68 334-412 115-185 (336)
494 4e6p_A Probable sorbitol dehyd 52.8 52 0.0018 29.9 8.8 80 333-418 7-96 (259)
495 3s55_A Putative short-chain de 52.7 53 0.0018 30.2 9.0 81 333-416 9-111 (281)
496 3l9w_A Glutathione-regulated p 52.5 21 0.00073 35.8 6.4 70 334-413 4-77 (413)
497 4dmm_A 3-oxoacyl-[acyl-carrier 52.2 47 0.0016 30.6 8.5 82 333-417 27-119 (269)
498 3uve_A Carveol dehydrogenase ( 52.0 50 0.0017 30.5 8.7 80 333-415 10-115 (286)
499 2z1n_A Dehydrogenase; reductas 52.0 54 0.0018 29.8 8.8 78 334-413 7-94 (260)
500 2bd0_A Sepiapterin reductase; 51.9 38 0.0013 30.3 7.6 77 335-414 3-96 (244)
No 1
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=100.00 E-value=2e-66 Score=542.89 Aligned_cols=361 Identities=25% Similarity=0.390 Sum_probs=325.9
Q ss_pred CCHHHHHHHHHHHHHHhCCCchHHHhhcCCCCCCCcchhhhhhhcccCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012998 57 VSPHRAVSAVRLMRIQFGGAFADLLNKKGKGSGDNEMGYVERTLGFRTKDLDD-RDLRLVTDIVGGTIRWRRYLDHLICL 135 (451)
Q Consensus 57 ~~~~R~~A~~~L~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~l~~-~d~~~~~~lv~gvlr~~~~LD~~i~~ 135 (451)
..++|+.|+++||+++.++.+++.++... ++...+++ +|++|+++|||||+||+..||++|+.
T Consensus 10 ~~~~R~~A~~~L~~v~~~~~~~~~~l~~~----------------~~~~~l~~~~dr~~~~~lv~gvlr~~~~ld~~i~~ 73 (450)
T 2yxl_A 10 IPPKGIRAIIEAIRLGEIIKPSQYAKREA----------------FKKHDVEEAWLNRVLTMIFYDIMKKQGLIDKVIKE 73 (450)
T ss_dssp CCHHHHHHHHHHHHHTTTSSSTHHHHHHH----------------HHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhcCCcHHHHHHHH----------------HHhccCCcHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 34799999999999999888888866531 12234777 99999999999999999999999999
Q ss_pred hccCCCCCCcccHHHHHHHHHHHHHHHhcCCCchhhHH----HHHHHHHHhcCCCCchhHHHHHHHHHhhccCCCCCCCc
Q 012998 136 LCHDEKTFSSMEPLLLQILRIGFYEIVKLDMPPYAVVD----ENVRLAKVALRPGAGNLVNGILRKLVLLKDNNSLPLPK 211 (451)
Q Consensus 136 ~~~~~~~~~~l~~~~~~iLrl~~yell~~~~p~~a~in----EaV~Lak~~~~~~~~~fVNaVLr~i~r~~~~~~~~~~~ 211 (451)
+++ .+++++++++++|||+|+|||+| ++|++++|| |+|++||+++++++++|||||||++.+.... ..
T Consensus 74 ~~~--~~~~~~~~~~~~iLrla~yell~-~ip~~~ain~~~~eaVelak~~~~~~~~~fvNgvL~~~~r~~~~----~~- 145 (450)
T 2yxl_A 74 IVG--VTPLILDPWLRAALRVAVDIALF-HDPSSQTIKNLRWKASDFISSRTHPYVGMYFWDLLDKIFEYKPN----PK- 145 (450)
T ss_dssp HHS--SCGGGSCHHHHHHHHHHHHHHHH-SCBCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTCCCC----CC-
T ss_pred hcc--CChhhcCHHHHHHHHHHHHHHhc-CCCchHHhccccHHHHHHHHhccccccccchHHHHHHHhhcccc----cc-
Confidence 987 47889999999999999999999 999999999 9999999998888899999999999985310 10
Q ss_pred CcCCchHHHHHHHHhhCChHHHHHHHHHhhCHHHHHHHHHHcC-CCCCcEEEEcCCCCCCHHHHHHHHhcCCCCceeccC
Q 012998 212 LEGNDRAQARALATIYSHPVWMVRRWTKYLGQEEAIKLMVWNN-SDPSFSLRANSRKGVTRADLVMQLNLLKVPHELSLH 290 (451)
Q Consensus 212 ~~~~~~~~~~~la~~~s~P~wl~~~~~~~~g~e~~~~~~~~~~-~~~~~~lRvN~~k~~~~~~~~~~L~~~g~~~~~~~~ 290 (451)
+..+.+++.||||.||+++|.+.|| +++++++++++ .+||+++|||+++ ++++++.+.|++.|+.+++++|
T Consensus 146 ------~~~~~~~~~~~~P~w~~~~~~~~~g-~~~~~~~~a~~~~~~~~~~Rvn~~k-~~~~~~~~~L~~~g~~~~~~~~ 217 (450)
T 2yxl_A 146 ------NELEELEWKYLAPSWLIERVKGILG-DETEDFFRSVNKRHEWISIRVNTLK-ANVEEVIGELEEDGVEVVRSER 217 (450)
T ss_dssp ------SHHHHHHHHHTSCHHHHHHHHHHHG-GGHHHHHHHHHCCCCEEEEEECTTT-CCHHHHHHHHHHTTCCEEECSS
T ss_pred ------chhhhhhhHhcCcHHHHHHHHHHhh-HHHHHHHHhcCCCCCCEEEEEcCCC-CCHHHHHHHHHhCCccceecCc
Confidence 1246789999999999999999999 88999999999 9999999999999 7999999999999999999999
Q ss_pred CCceEEEeCCCcchhchhhhhcCceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHH
Q 012998 291 LDEFIRVKTGLQNVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGR 370 (451)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~G~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~r 370 (451)
+|+++.+.... .+..++.|.+|.+++||.+|++++.++++++|++|||+|||||++|+++++.+++.+.|+|+|+++.+
T Consensus 218 ~~~~~~~~~~~-~~~~~~~~~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~ 296 (450)
T 2yxl_A 218 VPTILKIKGPY-NFDTSSAFNEGKIIVQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMR 296 (450)
T ss_dssp CTTEEEEESCC-CTTSCHHHHTTSEEECCHHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHH
T ss_pred cCceEEeCCCC-CcccCchhhCceEEecCchhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHH
Confidence 99999986432 57788999999999999999999999999999999999999999999999998877999999999999
Q ss_pred HHHHHHHHHHcCCCceEEEEcCccccccccCC-CCcCEEEEcCCCCCccccccCCcccccCCHhHHHHHHHHHHHHHHHh
Q 012998 371 LRILNETAKLHQVNSVIRTIHADLRTFADNST-VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAA 449 (451)
Q Consensus 371 l~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~-~~fD~VlvD~PCSg~G~lrr~pd~~~~~~~~~l~~l~~lQ~~lL~~A 449 (451)
++.+++|++++|+.+ +.++++|+..++.... +.||+|++||||||+|+++++||++|.++++++..+..+|.++|.++
T Consensus 297 l~~~~~~~~~~g~~~-v~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a 375 (450)
T 2yxl_A 297 MKRLKDFVKRMGIKI-VKPLVKDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESA 375 (450)
T ss_dssp HHHHHHHHHHTTCCS-EEEECSCTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCc-EEEEEcChhhcchhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999986 8999999988754232 67999999999999999999999999999999999999999999998
Q ss_pred hC
Q 012998 450 SL 451 (451)
Q Consensus 450 ~~ 451 (451)
.+
T Consensus 376 ~~ 377 (450)
T 2yxl_A 376 AR 377 (450)
T ss_dssp HT
T ss_pred HH
Confidence 63
No 2
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=100.00 E-value=1.3e-64 Score=526.26 Aligned_cols=356 Identities=28% Similarity=0.389 Sum_probs=318.3
Q ss_pred HHHHHHHHHHHHHHhCCCchHHHhhcCCCCCCCcchhhhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 012998 59 PHRAVSAVRLMRIQFGGAFADLLNKKGKGSGDNEMGYVERTLGFRTKDLDDRDLRLVTDIVGGTIRWRRYLDHLICLLCH 138 (451)
Q Consensus 59 ~~R~~A~~~L~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~l~~~d~~~~~~lv~gvlr~~~~LD~~i~~~~~ 138 (451)
.+|+.|+++||+++.++.+.+.++... ...++.+|++|+++|||||+||+..||++|+++++
T Consensus 6 ~aR~~A~~~L~~~~~~~~~~~~~l~~~------------------~~~~~~~dr~~~~~lv~gvlr~~~~ld~~i~~~~~ 67 (429)
T 1sqg_A 6 NLRSMAAQAVEQVVEQGQSLSNILPPL------------------QQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMA 67 (429)
T ss_dssp CHHHHHHHHHHHHHHHCCCHHHHHHHH------------------HTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHH------------------HhhCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhcC
Confidence 489999999999988887777665431 12478999999999999999999999999999987
Q ss_pred CCCCCCcccHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccCCCCCCCcCcCCchH
Q 012998 139 DEKTFSSMEPLLLQILRIGFYEIVKLDMPPYAVVDENVRLAKVALRPGAGNLVNGILRKLVLLKDNNSLPLPKLEGNDRA 218 (451)
Q Consensus 139 ~~~~~~~l~~~~~~iLrl~~yell~~~~p~~a~inEaV~Lak~~~~~~~~~fVNaVLr~i~r~~~~~~~~~~~~~~~~~~ 218 (451)
+ +++++++++++|||+|+|||+|+++|++++|||+|++||+|+.+.+++|||||||++.+..+.. +. .
T Consensus 68 ~--~~~~~~~~~~~iLrl~~yel~~~~~p~~~~ineaVelak~~~~~~~~~fvN~vL~~~~r~~~~~----~~------~ 135 (429)
T 1sqg_A 68 R--PMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEEL----LA------E 135 (429)
T ss_dssp S--CCCGGGHHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHH----HH------H
T ss_pred C--ChhhcCHHHHHHHHHHHHHHhhCCCCchHhhHHHHHHHHHhccccchhhHHHHHHHHHHhhhcc----cc------c
Confidence 4 6789999999999999999999999999999999999999998889999999999999864311 00 0
Q ss_pred HHHHHHHhhCChHHHHHHHHHhhCHHHHHHHHHHcCCCCCcEEEEcCCCCCCHHHHHHHHhcCCCCceeccCCCceEEEe
Q 012998 219 QARALATIYSHPVWMVRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKVPHELSLHLDEFIRVK 298 (451)
Q Consensus 219 ~~~~la~~~s~P~wl~~~~~~~~g~e~~~~~~~~~~~~~~~~lRvN~~k~~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~ 298 (451)
....++ .||+|.||+++|.+.|| +++++++++++.+||+++|||+++ ++++++.+.|++.|+..++++|+++++.+.
T Consensus 136 ~~~~~~-~~~~p~w~~~~~~~~~g-~~~~~~~~~~~~~~~~~~Rvn~~~-~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 212 (429)
T 1sqg_A 136 FNASDA-RYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTH-HSRDSWLALLDEAGMKGFPHADYPDAVRLE 212 (429)
T ss_dssp HTTSGG-GGCSCHHHHHHHHHHCT-TTHHHHHHHHTSCCCEEEEECTTT-CCHHHHHHHHHHTTCCEECCTTCTTEEEES
T ss_pred chhhhh-hhcCcHHHHHHHHHHhh-HHHHHHHHhCCCCCCeEEEEcCCC-CCHHHHHHHHHhCCCceeecCCCCCEEEEC
Confidence 001245 89999999999999999 778999999999999999999999 799999999999999999999999999987
Q ss_pred CCCcchhchhhhhcCceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHH
Q 012998 299 TGLQNVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETA 378 (451)
Q Consensus 299 ~~~~~~~~~~~~~~G~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~ 378 (451)
.+. .+...+.|.+|.+++||++|++++.++++++|++|||+|||||++|+++++.+++ +.|+|+|+++.+++.+++|+
T Consensus 213 ~~~-~~~~~~~~~~G~~~~qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~~l~~~~~~~ 290 (429)
T 1sqg_A 213 TPA-PVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNL 290 (429)
T ss_dssp SCC-CGGGSTTGGGTSEEECCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTTTHHHHHHHH
T ss_pred CCC-CcccChHHhCCCeEeeCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHH
Confidence 543 5778899999999999999999999999999999999999999999999999865 89999999999999999999
Q ss_pred HHcCCCceEEEEcCcccccccc-CCCCcCEEEEcCCCCCccccccCCcccccCCHhHHHHHHHHHHHHHHHhhC
Q 012998 379 KLHQVNSVIRTIHADLRTFADN-STVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASL 451 (451)
Q Consensus 379 ~~~g~~~~I~~~~~Da~~~~~~-~~~~fD~VlvD~PCSg~G~lrr~pd~~~~~~~~~l~~l~~lQ~~lL~~A~~ 451 (451)
+++|+. +.++++|+..+... ..++||+|++||||||+|+++++|+++|.++++++..+..+|.++|++|++
T Consensus 291 ~~~g~~--~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~ 362 (429)
T 1sqg_A 291 KRLGMK--ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWP 362 (429)
T ss_dssp HHTTCC--CEEEECCTTCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGG
T ss_pred HHcCCC--eEEEeCchhhchhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 999985 67889999887532 236899999999999999999999999999999999999999999999863
No 3
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=100.00 E-value=2.5e-44 Score=359.11 Aligned_cols=229 Identities=27% Similarity=0.395 Sum_probs=205.9
Q ss_pred HHHHHHHHhhCChHHHHHHHHHhhCHHHHHHHHHHcCCCCCcEEEEcCCCCCCHHHHHHHHhcCCCCceeccCCCceEEE
Q 012998 218 AQARALATIYSHPVWMVRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKVPHELSLHLDEFIRV 297 (451)
Q Consensus 218 ~~~~~la~~~s~P~wl~~~~~~~~g~e~~~~~~~~~~~~~~~~lRvN~~k~~~~~~~~~~L~~~g~~~~~~~~~~~~~~~ 297 (451)
+..++|++.||||.||+++|.+.|| ++++++++++++++|+++|||++| ++++++.+.|++.|+.+++.+|+++++.+
T Consensus 5 ~~~~~l~~~~~~P~w~~~~~~~~~g-~~~~~~~~~~~~~~p~~~RvN~~k-~~~~~~~~~L~~~g~~~~~~~~~~~~~~~ 82 (315)
T 1ixk_A 5 PSMLDKLLRLGYSKLFADRYFQLWG-ERAIRIAEAMEKPLPRCFRVNTLK-ISVQDLVKRLNKKGFQFKRVPWAKEGFCL 82 (315)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHT-THHHHHHHHTTSCCCCEEEECTTT-SCHHHHHHHHHHTTCEEEEETTEEEEEEE
T ss_pred cHHHHHHHHhCCcHHHHHHHHHHcc-HHHHHHHHHcCCCCCeEEEEeCCC-CCHHHHHHHHHhCCCeeeECCCCCceEEE
Confidence 3577899999999999999999999 889999999999999999999999 89999999999999999999999998888
Q ss_pred eCCCcchhchhhhhcCceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHH
Q 012998 298 KTGLQNVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNET 377 (451)
Q Consensus 298 ~~~~~~~~~~~~~~~G~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~ 377 (451)
..+...+..++.|.+|.+++||.+|++++.++++++|++|||+|||||++|+++++.+++.+.|+|+|+++.+++.+++|
T Consensus 83 ~~~~~~~~~~~~~~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~ 162 (315)
T 1ixk_A 83 TREPFSITSTPEFLTGLIYIQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLN 162 (315)
T ss_dssp EECSSCGGGSHHHHTTSEEECCHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHH
T ss_pred eCCCCCcccChhHhcceEEEeCHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHH
Confidence 64333577889999999999999999999999999999999999999999999999988789999999999999999999
Q ss_pred HHHcCCCceEEEEcCccccccccCCCCcCEEEEcCCCCCccccccCCcccccCCHhHHHHHHHHHHHHHHHhh
Q 012998 378 AKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAAS 450 (451)
Q Consensus 378 ~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD~PCSg~G~lrr~pd~~~~~~~~~l~~l~~lQ~~lL~~A~ 450 (451)
++++|+.+ ++++++|+..++. ..+.||+|++||||||+|+++++|+++|.++++++.++..+|.++|++++
T Consensus 163 ~~~~g~~~-v~~~~~D~~~~~~-~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~ 233 (315)
T 1ixk_A 163 LSRLGVLN-VILFHSSSLHIGE-LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGL 233 (315)
T ss_dssp HHHHTCCS-EEEESSCGGGGGG-GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCe-EEEEECChhhccc-ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHH
Confidence 99999986 8999999998764 34689999999999999999999999999999999999999999999885
No 4
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=100.00 E-value=1.2e-42 Score=364.83 Aligned_cols=223 Identities=23% Similarity=0.272 Sum_probs=200.5
Q ss_pred hhCChHHHHHHHHHhhCHH-HHHHHHHHcCCCCCcEEEEcCCCCCCHHHHHHHHhcCCCCceeccCCCceEEEeCCC---
Q 012998 226 IYSHPVWMVRRWTKYLGQE-EAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKVPHELSLHLDEFIRVKTGL--- 301 (451)
Q Consensus 226 ~~s~P~wl~~~~~~~~g~e-~~~~~~~~~~~~~~~~lRvN~~k~~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~--- 301 (451)
.|+||.||+++|.+.||++ +++++++++++++|+++|||++| ++++++.+.|++.|+.+++.+|+++++.+....
T Consensus 5 ~~~~P~~~~~~~~~~~g~~~~~~~~~~a~~~~~p~~lRvN~lk-~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (479)
T 2frx_A 5 TVYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVNTLK-ISVADFLQLTAPYGWTLTPIPWCEEGFWIERDNEDA 83 (479)
T ss_dssp --CCCHHHHHHHGGGCC----CHHHHHHHTSCCCCCEEECTTT-CCHHHHHHHHGGGCCCCCEETTEEEEEC--------
T ss_pred cccCcHHHHHHHHHHcCccHHHHHHHHhcCCCCCEEEEEeCCC-CCHHHHHHHHHHcCCceeecCCCCceEEEecCcccc
Confidence 4789999999999999977 68999999999999999999999 899999999999999999999999888775321
Q ss_pred cchhchhhhhcCceeeecchhhhhhhhhCCC--CCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHH
Q 012998 302 QNVIQAGLLKEGLCAVQDESAGLVVAVVDPQ--PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAK 379 (451)
Q Consensus 302 ~~~~~~~~~~~G~~~vQd~as~l~~~~l~~~--~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~ 379 (451)
..+..++.|..|.+++||++|++++.+++++ +|++|||+|||||++|+++|+.+++.|.|+|+|+++.|++.+++|++
T Consensus 84 ~~~~~~~~~~~G~~~~Qd~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~ 163 (479)
T 2frx_A 84 LPLGSTAEHLSGLFYIQEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANIS 163 (479)
T ss_dssp -CGGGSHHHHTTSEEECCHHHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHH
T ss_pred cCcccChHHhCcEEEEECHHHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH
Confidence 1467788999999999999999999999998 99999999999999999999999888999999999999999999999
Q ss_pred HcCCCceEEEEcCccccccccCCCCcCEEEEcCCCCCccccccCCcccccCCHhHHHHHHHHHHHHHHHhh
Q 012998 380 LHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAAS 450 (451)
Q Consensus 380 ~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD~PCSg~G~lrr~pd~~~~~~~~~l~~l~~lQ~~lL~~A~ 450 (451)
++|+.+ |.++++|+..+.....+.||+|++||||||+|+++++|+++|.|+++++..++.+|++||.+|+
T Consensus 164 r~g~~n-v~~~~~D~~~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~ 233 (479)
T 2frx_A 164 RCGISN-VALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAF 233 (479)
T ss_dssp HHTCCS-EEEECCCSTTHHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCCc-EEEEeCCHHHhhhhccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHH
Confidence 999986 8999999988764345789999999999999999999999999999999999999999999985
No 5
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=100.00 E-value=1.5e-41 Score=353.90 Aligned_cols=216 Identities=27% Similarity=0.344 Sum_probs=199.8
Q ss_pred CChHHHHHHHHHhhCHHHHHHHHHHcCCC-CCcEEEEcCCCCCCHHHHHHHHhcCCCCceeccCCCceEEEeCCCcchhc
Q 012998 228 SHPVWMVRRWTKYLGQEEAIKLMVWNNSD-PSFSLRANSRKGVTRADLVMQLNLLKVPHELSLHLDEFIRVKTGLQNVIQ 306 (451)
Q Consensus 228 s~P~wl~~~~~~~~g~e~~~~~~~~~~~~-~~~~lRvN~~k~~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 306 (451)
.+|+||+++|.+.|| +++++++++++++ |+++||||++| ++++++.+.| |+..++.+|+++++.+.... .+..
T Consensus 1 ~lP~w~~~~~~~~~g-~e~~~~l~a~~~~~~~~~lRvN~lk-~~~~~~~~~l---~~~~~~~~~~~~g~~l~~~~-~~~~ 74 (464)
T 3m6w_A 1 MLPKAFLSRMAELLG-EEFPAFLKALTEGKRTYGLRVNTLK-LPPEAFQRIS---PWPLRPIPWCQEGFYYPEEA-RPGP 74 (464)
T ss_dssp CCCHHHHHHHHHHHG-GGHHHHHHHHHTSCCCCEEEECTTT-CCHHHHHHHC---SSCCEEETTEEEEEECCTTC-CCSS
T ss_pred CCcHHHHHHHHHHHH-HHHHHHHHHcCCCCCCeEEEEcCCC-CCHHHHHHHc---CCCceecCCCCceEEECCCC-Cccc
Confidence 389999999999999 4699999999999 99999999999 8999998776 78888999999999887543 4567
Q ss_pred hhhhhcCceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCce
Q 012998 307 AGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSV 386 (451)
Q Consensus 307 ~~~~~~G~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~ 386 (451)
++.|.+|.+++||++|++++.++++++|++|||+|||||++|+++|+.+++.|.|+|+|+++.+++.+++|++++|+.
T Consensus 75 ~~~~~~G~~~vQd~ss~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-- 152 (464)
T 3m6w_A 75 HPFFYAGLYYIQEPSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-- 152 (464)
T ss_dssp SHHHHTTSEEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--
T ss_pred ChHHhCCeEEEECHHHHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--
Confidence 889999999999999999999999999999999999999999999999988899999999999999999999999997
Q ss_pred EEEEcCccccccccCCCCcCEEEEcCCCCCccccccCCcccccCCHhHHHHHHHHHHHHHHHhhC
Q 012998 387 IRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASL 451 (451)
Q Consensus 387 I~~~~~Da~~~~~~~~~~fD~VlvD~PCSg~G~lrr~pd~~~~~~~~~l~~l~~lQ~~lL~~A~~ 451 (451)
|.++++|+..+.....++||+|++||||||+|+++++|+++|.++++++..+..+|++||++|++
T Consensus 153 v~~~~~Da~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~ 217 (464)
T 3m6w_A 153 LAVTQAPPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASR 217 (464)
T ss_dssp CEEECSCHHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHT
T ss_pred EEEEECCHHHhhhhccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHH
Confidence 78999999887643457899999999999999999999999999999999999999999999864
No 6
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=100.00 E-value=1.4e-41 Score=353.76 Aligned_cols=212 Identities=25% Similarity=0.293 Sum_probs=192.4
Q ss_pred hCChHHHHHHHHHhhCHHHHHHHHHHcCCCCC-cEEEEcCCCCCCHHHHHHHHhcCCCCce---eccCCCceEEEeCCCc
Q 012998 227 YSHPVWMVRRWTKYLGQEEAIKLMVWNNSDPS-FSLRANSRKGVTRADLVMQLNLLKVPHE---LSLHLDEFIRVKTGLQ 302 (451)
Q Consensus 227 ~s~P~wl~~~~~~~~g~e~~~~~~~~~~~~~~-~~lRvN~~k~~~~~~~~~~L~~~g~~~~---~~~~~~~~~~~~~~~~ 302 (451)
.+||+||+++|.+.||+ ++++++++++++|| ++||||++| + +++.+.+ |+.++ +.+|+++++. ..
T Consensus 6 ~~~P~w~~~~~~~~~g~-e~~~~~~a~~~~~~~~~lRvN~lk-~--~~~~~~~---~~~~~~~~~~~~~~~~~~--~~-- 74 (456)
T 3m4x_A 6 TTLPQQFIKKYRLLLGE-EASDFFSALEQGSVKKGFRWNPLK-P--AGLDMVQ---TYHSEELQPAPYSNEGFL--GT-- 74 (456)
T ss_dssp -CCCHHHHHHHHHHHGG-GHHHHHHHHHHCCCCCEEECCTTS-T--THHHHHH---HHTCSSCCBCTTCTTEEE--SC--
T ss_pred hhChHHHHHHHHHHhCH-HHHHHHHHcCCCCCCcEEEEcCcc-H--HHHHHhc---CCcccccCCCCCCcceEE--cC--
Confidence 58999999999999995 59999999999999 999999999 4 6666544 45555 8899999887 22
Q ss_pred chhchhhhhcCceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcC
Q 012998 303 NVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQ 382 (451)
Q Consensus 303 ~~~~~~~~~~G~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g 382 (451)
.+..++.|.+|.+++||++|++++.++++++|++|||+|||||+||+++|+.+++.|.|+|+|+++.+++.+++|++++|
T Consensus 75 ~~~~~~~~~~G~~~vQd~ss~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g 154 (456)
T 3m4x_A 75 VNGKSFLHQAGYEYSQEPSAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWG 154 (456)
T ss_dssp CCTTSHHHHTTSCEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHT
T ss_pred CCCCChHHhCCcEEEECHHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcC
Confidence 24678899999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred CCceEEEEcCccccccccCCCCcCEEEEcCCCCCccccccCCcccccCCHhHHHHHHHHHHHHHHHhh
Q 012998 383 VNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAAS 450 (451)
Q Consensus 383 ~~~~I~~~~~Da~~~~~~~~~~fD~VlvD~PCSg~G~lrr~pd~~~~~~~~~l~~l~~lQ~~lL~~A~ 450 (451)
+.| |.++++|+..+.....+.||+|++||||||+|++|++|+++|.++++++..++.+|++||++|+
T Consensus 155 ~~n-v~v~~~Da~~l~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~ 221 (456)
T 3m4x_A 155 VSN-AIVTNHAPAELVPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAI 221 (456)
T ss_dssp CSS-EEEECCCHHHHHHHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHH
T ss_pred CCc-eEEEeCCHHHhhhhccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHH
Confidence 987 8999999988764345789999999999999999999999999999999999999999999986
No 7
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=100.00 E-value=5.4e-38 Score=312.31 Aligned_cols=195 Identities=24% Similarity=0.322 Sum_probs=158.6
Q ss_pred CCCCCcEEEEcCCCCCCHHHHHHHHhcCCCCceecc------------------CCCceEEEeCCCcchhchhhhhcCce
Q 012998 254 NSDPSFSLRANSRKGVTRADLVMQLNLLKVPHELSL------------------HLDEFIRVKTGLQNVIQAGLLKEGLC 315 (451)
Q Consensus 254 ~~~~~~~lRvN~~k~~~~~~~~~~L~~~g~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~G~~ 315 (451)
+.++|+++|||++| ++++++++.|++.|+..++.+ ++++.+.++.+. .+..++.|++|.+
T Consensus 7 ~~~~p~~lRvN~lk-~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~-~~~~~~~~~~G~~ 84 (309)
T 2b9e_A 7 ASQLPRFVRVNTLK-TCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFLLDPLMPELLVFPAQT-DLHEHPLYRAGHL 84 (309)
T ss_dssp --CCCEEEEECTTT-CCHHHHHHHHHHTTCEEEEECSSHHHHHTCCTTEEEECSSSTTEEEECTTC-CCTTSHHHHTTSE
T ss_pred CCCCCeEEEEeCCC-CCHHHHHHHHHhCCCeeeeccccccccccccccccccccCCCceEEeCCCC-CcccChHHHCCeE
Confidence 46789999999999 899999999999999877753 456677776442 5778899999999
Q ss_pred eeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccc
Q 012998 316 AVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLR 395 (451)
Q Consensus 316 ~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~ 395 (451)
++||++|++++.++++++|++|||+|||||+||+++|+.+++.|+|+|+|+++.+++.+++|++++|+.+ |+++++|+.
T Consensus 85 ~~Qd~~s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~-v~~~~~D~~ 163 (309)
T 2b9e_A 85 ILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSC-CELAEEDFL 163 (309)
T ss_dssp EECCTGGGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEECCGG
T ss_pred EEECHHHHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEeCChH
Confidence 9999999999999999999999999999999999999999888999999999999999999999999986 899999998
Q ss_pred cccccC--CCCcCEEEEcCCCCCccccccCCcccccC--CHhHHHHHHHHHHHHHHHhhC
Q 012998 396 TFADNS--TVKCDKVLLDAPCSGLGVLSKRADLRWNR--RLEDMEELKILQDELLDAASL 451 (451)
Q Consensus 396 ~~~~~~--~~~fD~VlvD~PCSg~G~lrr~pd~~~~~--~~~~l~~l~~lQ~~lL~~A~~ 451 (451)
.+.... ..+||+||+||||||+|+++|+||++|.+ +++++.+|+.+|++||++|++
T Consensus 164 ~~~~~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~ 223 (309)
T 2b9e_A 164 AVSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALT 223 (309)
T ss_dssp GSCTTCGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTT
T ss_pred hcCccccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHh
Confidence 875321 14799999999999999999999999864 788999999999999999863
No 8
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=100.00 E-value=2.4e-34 Score=290.62 Aligned_cols=212 Identities=21% Similarity=0.261 Sum_probs=173.1
Q ss_pred HHHHHHHhhCHHHHHHHHHHcCCCCCcEEEEcCCCCCCHHHHHHHHhcCCCCc-----------e----------e-ccC
Q 012998 233 MVRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKVPH-----------E----------L-SLH 290 (451)
Q Consensus 233 l~~~~~~~~g~e~~~~~~~~~~~~~~~~lRvN~~k~~~~~~~~~~L~~~g~~~-----------~----------~-~~~ 290 (451)
|-+.+.+.|| ++|..+..++.+++...+|+|+.+ +.+++.+.|+..|..- + + ..+
T Consensus 23 Fd~~Y~~~~G-~~W~~~r~aL~~~~~~~a~vN~f~--~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 99 (359)
T 4fzv_A 23 FDMTYSVQFG-DLWPSIRVSLLSEQKYGALVNNFA--AWDHVSAKLEQLSAKDFVNEAISHWELQSEGGQSAAPSPASWA 99 (359)
T ss_dssp HHHHHHHHHG-GGHHHHHHHHTSCCCCEEEECTTS--CHHHHHHHHHHTTCEEHHHHHHHTTTCCC-----CCSSCHHHH
T ss_pred HHHHHHHHhh-hhhHHHHHHHcCcchhEEEeccCC--ChHHHHHHHHhccCccchhhhhcccccccccccccCCCccccc
Confidence 5677788888 579999999999999999999985 6788888888766410 0 0 001
Q ss_pred CCc---eEEEeCCCcchhchhhhhcC-----ceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEE
Q 012998 291 LDE---FIRVKTGLQNVIQAGLLKEG-----LCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVY 362 (451)
Q Consensus 291 ~~~---~~~~~~~~~~~~~~~~~~~G-----~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~ 362 (451)
++. .+.++.+ .+...+.|++| .|++||++||+++.+|+++||++|||+||||||||++|++.+. .+.|+
T Consensus 100 ~~~~l~~~~~~~g--~~~~~p~~~~g~~~vqd~~iQd~aS~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~-~~~l~ 176 (359)
T 4fzv_A 100 CSPNLRCFTFDRG--DISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGC-CRNLA 176 (359)
T ss_dssp SCSSCCEEECCTT--CCCCCCCCCBCTTSSBSEEEECGGGHHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTC-EEEEE
T ss_pred CCccceEEecCCC--ChhcCCCcccCceeccchhhhCHHHHHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcC-CCcEE
Confidence 111 1222322 23344445544 5778889999999999999999999999999999999999764 48999
Q ss_pred EEeCCHHHHHHHHHHHHHcCCC-----ceEEEEcCccccccccCCCCcCEEEEcCCCCCc--cccccCCcccccCCHhHH
Q 012998 363 AIDINKGRLRILNETAKLHQVN-----SVIRTIHADLRTFADNSTVKCDKVLLDAPCSGL--GVLSKRADLRWNRRLEDM 435 (451)
Q Consensus 363 AvDi~~~rl~~l~~~~~~~g~~-----~~I~~~~~Da~~~~~~~~~~fD~VlvD~PCSg~--G~lrr~pd~~~~~~~~~l 435 (451)
|+|+++.|++.+++|++++|.. ++|.+...|++.+.....+.||+||+||||||+ |++|++|+++|+++++++
T Consensus 177 A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~ 256 (359)
T 4fzv_A 177 ANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKER 256 (359)
T ss_dssp EECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHH
T ss_pred EEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHH
Confidence 9999999999999999999874 348899999998876566789999999999997 889999999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q 012998 436 EELKILQDELLDAAS 450 (451)
Q Consensus 436 ~~l~~lQ~~lL~~A~ 450 (451)
..|+.+|++||.+|+
T Consensus 257 ~~l~~lQ~~iL~~a~ 271 (359)
T 4fzv_A 257 QILPVLQVQLLAAGL 271 (359)
T ss_dssp HTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999996
No 9
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=100.00 E-value=9.3e-34 Score=277.04 Aligned_cols=194 Identities=30% Similarity=0.370 Sum_probs=158.8
Q ss_pred HHHcCCCCCcEEEEcCCCCCCHHHHHHHHhcCCCCceeccCCCceEEEeCCCcchhchhhhhcCceeeecchhhhhhhhh
Q 012998 250 MVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKVPHELSLHLDEFIRVKTGLQNVIQAGLLKEGLCAVQDESAGLVVAVV 329 (451)
Q Consensus 250 ~~~~~~~~~~~lRvN~~k~~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~vQd~as~l~~~~l 329 (451)
|.+++.++|+++|||+++ .+++++.+.|++.|+.+++ +|+++++.+......+...+.|..|.+++||.++++++.++
T Consensus 2 m~~~~~~~~~~~rvn~~~-~~~~~~~~~l~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~~qd~~s~l~~~~l 79 (274)
T 3ajd_A 2 MIVYKGEKMQFIRVNTLK-INPEVLKKRLENKGVVLEK-TFLDYAFEVKKSPFSIGSTPEYLFGYYMPQSISSMIPPIVL 79 (274)
T ss_dssp -------CCEEEEECTTT-CCHHHHHHHHHTTTCEEEE-CSSTTEEEEEECSSCTTSSHHHHTTSEEECCSGGGHHHHHH
T ss_pred hhhhCCCCCeEEEEeCCC-CCHHHHHHHHHHCCCeecC-CCCCceEEEecCCCCcccChhhhCCeEEEeCHHHHHHHHHh
Confidence 456678899999999999 8999999999999999888 99999988832222467788999999999999999999999
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---CCCCcC
Q 012998 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---STVKCD 406 (451)
Q Consensus 330 ~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---~~~~fD 406 (451)
++++|++|||+|||||++|+++++.+++.+.|+|+|+++.+++.+++|++++|+.+ +.++++|+..+... ..+.||
T Consensus 80 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~-v~~~~~D~~~~~~~~~~~~~~fD 158 (274)
T 3ajd_A 80 NPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLN-TIIINADMRKYKDYLLKNEIFFD 158 (274)
T ss_dssp CCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCc-EEEEeCChHhcchhhhhccccCC
Confidence 99999999999999999999999998877999999999999999999999999985 89999999887542 146899
Q ss_pred EEEEcCCCCCccccccCCcccccCCHhHHHHHHHHHHHHHHHhh
Q 012998 407 KVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAAS 450 (451)
Q Consensus 407 ~VlvD~PCSg~G~lrr~pd~~~~~~~~~l~~l~~lQ~~lL~~A~ 450 (451)
+|++||||||+|+++|+| +++++++.++...|.++|++|+
T Consensus 159 ~Vl~d~Pcs~~g~~~~~p----~~~~~~~~~~~~~~~~~l~~~~ 198 (274)
T 3ajd_A 159 KILLDAPCSGNIIKDKNR----NVSEEDIKYCSLRQKELIDIGI 198 (274)
T ss_dssp EEEEEECCC----------------HHHHTGGGTCHHHHHHHHH
T ss_pred EEEEcCCCCCCcccccCC----CCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998 5678899999999999999875
No 10
>1tzv_A NUSB protein, N utilization substance protein B homolog; RNA-protein interaction, transcriptional antitermination, transcription regulation; 1.35A {Thermotoga maritima} SCOP: a.79.1.1 PDB: 1tzu_A 1tzt_A 1tzw_A 1tzx_A*
Probab=99.96 E-value=2.1e-29 Score=222.74 Aligned_cols=128 Identities=19% Similarity=0.249 Sum_probs=116.8
Q ss_pred CHHHHHHHHHHHHHHhCCC-chHHHhhcCCCCCCCcchhhhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 012998 58 SPHRAVSAVRLMRIQFGGA-FADLLNKKGKGSGDNEMGYVERTLGFRTKDLDDRDLRLVTDIVGGTIRWRRYLDHLICLL 136 (451)
Q Consensus 58 ~~~R~~A~~~L~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~l~~~d~~~~~~lv~gvlr~~~~LD~~i~~~ 136 (451)
+.+|+.|+++||+++.++. +++.+++.. ++ ..+++.|+.|+++||+||++|+..||++|+++
T Consensus 6 ~~aR~~A~~~L~~~~~~~~~~~~~~l~~~----------------~~-~~l~~~d~~~~~~Lv~gvl~~~~~lD~~I~~~ 68 (142)
T 1tzv_A 6 RRMRLAVFKALFQHEFRRDEDLEQILEEI----------------LD-ETYDKKAKEDARRYIRGIKENLSMIDDLISRY 68 (142)
T ss_dssp HHHHHHHHHHHHHHTTCTTSCHHHHHHHH----------------CC-TTSCHHHHHHHHHHHHHHHHTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhcCCCCHHHHHHHH----------------HH-hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3799999999999999988 888776542 23 45789999999999999999999999999999
Q ss_pred ccCCCCCCcccHHHHHHHHHHHHHHHhc-CCCchhhHHHHHHHHHHhcCCCCchhHHHHHHHHHhhcc
Q 012998 137 CHDEKTFSSMEPLLLQILRIGFYEIVKL-DMPPYAVVDENVRLAKVALRPGAGNLVNGILRKLVLLKD 203 (451)
Q Consensus 137 ~~~~~~~~~l~~~~~~iLrl~~yell~~-~~p~~a~inEaV~Lak~~~~~~~~~fVNaVLr~i~r~~~ 203 (451)
+++ |+++++++++++|||+|+|||+|+ ++|++++|||+|+|||+|+++++++|||||||++.+...
T Consensus 69 l~~-w~l~rl~~~~r~iLrla~yEl~~~~~iP~~vaInEaVelaK~~~~~~~~~fVNgVL~~i~r~~~ 135 (142)
T 1tzv_A 69 LEK-WSLNRLSVVDRNVLRLATYELLFEKDIPIEVTIDEAIEIAKRYGTENSGKFVNGILDRIAKEHA 135 (142)
T ss_dssp CSS-SCGGGSCHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHC
T ss_pred cCC-CChHHCCHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHhc
Confidence 987 999999999999999999999998 599999999999999999999999999999999998653
No 11
>3d3b_A Protein NUSB, N utilization substance protein B; NUSB, NUSE, NUT site, phage lambda, lambdan antitermina antitermination; HET: NHE; 1.30A {Escherichia coli} PDB: 3d3c_A 3imq_A 1ey1_A
Probab=99.96 E-value=4.5e-29 Score=220.37 Aligned_cols=127 Identities=22% Similarity=0.302 Sum_probs=112.6
Q ss_pred CHHHHHHHHHHHHHHhCCCchHHHhhcCCCCCCCcchhhhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 012998 58 SPHRAVSAVRLMRIQFGGAFADLLNKKGKGSGDNEMGYVERTLGFRTKDLDDRDLRLVTDIVGGTIRWRRYLDHLICLLC 137 (451)
Q Consensus 58 ~~~R~~A~~~L~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~l~~~d~~~~~~lv~gvlr~~~~LD~~i~~~~ 137 (451)
+.+|+.|+++||+++.++...+.++... +....+++.|+.|+++|||||++|+..||++|++++
T Consensus 9 ~~aR~~A~~~L~~~~~~~~~~~~~~~~~----------------~~~~~l~~~d~~~~~~Lv~gvl~~~~~lD~~I~~~l 72 (141)
T 3d3b_A 9 RRARECAVQALYSWQLSQNDIADVEYQF----------------LAEQDVKDVDVLYFRELLAGVATNTAYLDGLMKPYL 72 (141)
T ss_dssp HHHHHHHHHHHHHHHHHCCCHHHHHHHH----------------HHHSCCTTSCHHHHHHHHHHHHHTHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHHHHccCCCHHHHHHHH----------------HHhccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHc
Confidence 3799999999999988776655554321 122357788999999999999999999999999999
Q ss_pred cCCCCCCcccHHHHHHHHHHHHHHHhc-CCCchhhHHHHHHHHHHhcCCCCchhHHHHHHHHHhhc
Q 012998 138 HDEKTFSSMEPLLLQILRIGFYEIVKL-DMPPYAVVDENVRLAKVALRPGAGNLVNGILRKLVLLK 202 (451)
Q Consensus 138 ~~~~~~~~l~~~~~~iLrl~~yell~~-~~p~~a~inEaV~Lak~~~~~~~~~fVNaVLr~i~r~~ 202 (451)
+ |+++++++++++|||+|+|||+|+ ++|++++|||+|+|||+|+++++++|||||||++.++.
T Consensus 73 ~--~~l~rl~~~~r~iLrla~yEll~~~~iP~~vaInEaVelaK~~~~~~~~~fVNgVLr~i~r~~ 136 (141)
T 3d3b_A 73 S--RLLEELGQVEKAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSHKFVNGVLDKAAPVI 136 (141)
T ss_dssp T--TCSSCCCHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH
T ss_pred C--CCHHHcCHHHHHHHHHHHHHHHhCCCCCchhhHHHHHHHHHHHCCCCchHHHHHHHHHHHHHH
Confidence 7 999999999999999999999998 59999999999999999999999999999999999864
No 12
>3r2d_A Protein NUSB, N utilization substance protein B; cross species NUSB-NUSE-RNA interaction; 2.20A {Aquifex aeolicus} PDB: 2jr0_A 3r2c_A* 4eya_A
Probab=99.95 E-value=6.2e-29 Score=221.21 Aligned_cols=129 Identities=22% Similarity=0.227 Sum_probs=114.1
Q ss_pred CHHHHHHHHHHHHHHhCCCchHHHhhcCCCCCCCcchhhhhhhcccCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 012998 58 SPHRAVSAVRLMRIQFGGAFADLLNKKGKGSGDNEMGYVERTLGFRTKD-LDDRDLRLVTDIVGGTIRWRRYLDHLICLL 136 (451)
Q Consensus 58 ~~~R~~A~~~L~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~-l~~~d~~~~~~lv~gvlr~~~~LD~~i~~~ 136 (451)
+++|+.|+|+||+++.++.+.+.+++.. . .... +++.|+.|+++||+||++|+..||++|+++
T Consensus 6 ~~aR~~A~q~L~~~~~~~~~~~~~l~~~----------~------~~~~~~~~~dr~~~~~lv~gvl~~~~~lD~~i~~~ 69 (149)
T 3r2d_A 6 KGARDTAFLVLYRWDLRGENPGELFKEV----------V------EEKNIKNKDAYEYAKKLVDTAVRHIEEIDSIIEKH 69 (149)
T ss_dssp HHHHHHHHHHHHHHHHHCCCHHHHHHHH----------H------HHHTCCCHHHHHHHHHHHHHHHHTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHH----------H------HhcccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 4799999999999999999888877642 1 1122 789999999999999999999999999999
Q ss_pred ccCCCCCCcccHHHHHHHHHHHHHHHhc-CCCchhhHHHHHHHHHHhcCCCCchhHHHHHHHHHhhcc
Q 012998 137 CHDEKTFSSMEPLLLQILRIGFYEIVKL-DMPPYAVVDENVRLAKVALRPGAGNLVNGILRKLVLLKD 203 (451)
Q Consensus 137 ~~~~~~~~~l~~~~~~iLrl~~yell~~-~~p~~a~inEaV~Lak~~~~~~~~~fVNaVLr~i~r~~~ 203 (451)
+++ |+++++++++++|||+|+|||+|+ ++|++++|||+|+|||+|+++++++||||||+++.++..
T Consensus 70 l~~-w~~~rl~~~~r~iLrla~yEl~~~~~iP~~vaInEaVelaK~~~~~~~~~fVNgVLr~i~r~~~ 136 (149)
T 3r2d_A 70 LKG-WSIDRLGYVERNALRLGVAELIFLKSKEPGRVFIDIVDLVKKYADEKAGKFVNGVLSAIYKAYI 136 (149)
T ss_dssp C----CGGGSCHHHHHHHHHHHHHHTTSCCSCHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHC-
T ss_pred hcC-CCccccCHHHHHHHHHHHHHHHHcCCCCCeehHHHHHHHHHHhCCCCccccchHHhhHHHHhhc
Confidence 976 999999999999999999999998 599999999999999999999999999999999999754
No 13
>1eyv_A NUSB protein, N-utilizing substance protein B homolog; helical bundle, structural genomics, PSI, protein structure initiative; 1.60A {Mycobacterium tuberculosis} SCOP: a.79.1.1
Probab=99.94 E-value=7.6e-28 Score=215.78 Aligned_cols=133 Identities=23% Similarity=0.270 Sum_probs=109.5
Q ss_pred CCHHHHHHHHHHHHHHhCCCchHHHhhcCCCCCCCcchhhhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 012998 57 VSPHRAVSAVRLMRIQFGGAFADLLNKKGKGSGDNEMGYVERTLGFRTKDLDDRDLRLVTDIVGGTIRWRRYLDHLICLL 136 (451)
Q Consensus 57 ~~~~R~~A~~~L~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~l~~~d~~~~~~lv~gvlr~~~~LD~~i~~~ 136 (451)
++++|+.|+|+||+++.++.+.+.++... . .+. ......+.++.|+++|||||++|+..||++|.++
T Consensus 10 R~~aR~~Alq~L~~~~~~~~~~~~~l~~~----------~--~l~-~~d~~~~~~~~~~~~lv~gvl~~~~~lD~~i~~~ 76 (156)
T 1eyv_A 10 RHQARKRAVALLFEAEVRGISAAEVVDTR----------A--ALA-EAKPDIARLHPYTAAVARGVSEHAAHIDDLITAH 76 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCHHHHHHHH----------H--HHH-HHCTTSCCCCHHHHHHHHHHHHTHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHhcCCCHHHHHHHH----------H--hcc-ccccccHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 34799999999999998887766655421 0 000 0011234558999999999999999999999999
Q ss_pred ccCCCCCCcccHHHHHHHHHHHHHHHhcC-CCchhhHHHHHHHHHHhcCCCCchhHHHHHHHHHhhcc
Q 012998 137 CHDEKTFSSMEPLLLQILRIGFYEIVKLD-MPPYAVVDENVRLAKVALRPGAGNLVNGILRKLVLLKD 203 (451)
Q Consensus 137 ~~~~~~~~~l~~~~~~iLrl~~yell~~~-~p~~a~inEaV~Lak~~~~~~~~~fVNaVLr~i~r~~~ 203 (451)
+++ |+++++++++++|||+|+|||+|++ +|++++|||+|+|||+|+++++++|||||||++.+...
T Consensus 77 l~~-w~l~rl~~~~r~iLrla~yel~~~~~iP~~v~InEaVelak~~~~~~~~~fVNgVLr~i~r~~~ 143 (156)
T 1eyv_A 77 LRG-WTLDRLPAVDRAILRVSVWELLHAADVPEPVVVDEAVQLAKELSTDDSPGFVNGVLGQVMLVTP 143 (156)
T ss_dssp STT-CCGGGSCHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHC----
T ss_pred hcC-CChhhCCHHHHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHhCCCccccchHHHHHHHHHhHH
Confidence 987 9999999999999999999999985 99999999999999999999999999999999998653
No 14
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.51 E-value=5.6e-14 Score=143.73 Aligned_cols=124 Identities=26% Similarity=0.279 Sum_probs=100.4
Q ss_pred hhhhhcCceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCce
Q 012998 307 AGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSV 386 (451)
Q Consensus 307 ~~~~~~G~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~ 386 (451)
...+++|.|..|.....++...+ ++|.+|||+|||+|++|+++|.. + ..|+|+|+|+.+++.+++|++.+|+.+.
T Consensus 190 ~~~~~tG~f~dqr~~r~~l~~~~--~~g~~VLDlg~GtG~~sl~~a~~--g-a~V~avDis~~al~~a~~n~~~ng~~~~ 264 (393)
T 4dmg_A 190 ALAQKTGYYLDQRENRRLFEAMV--RPGERVLDVYSYVGGFALRAARK--G-AYALAVDKDLEALGVLDQAALRLGLRVD 264 (393)
T ss_dssp TTCCTTSSCGGGHHHHHHHHTTC--CTTCEEEEESCTTTHHHHHHHHT--T-CEEEEEESCHHHHHHHHHHHHHHTCCCE
T ss_pred hhccccCcCCCHHHHHHHHHHHh--cCCCeEEEcccchhHHHHHHHHc--C-CeEEEEECCHHHHHHHHHHHHHhCCCCc
Confidence 35688999999999988887664 36999999999999999999985 2 4599999999999999999999999853
Q ss_pred EEEEcCccccccccCCCCcCEEEEcCCCCCccccccCCcccccCCHhHHHHHHHHHHHHHHHhh
Q 012998 387 IRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAAS 450 (451)
Q Consensus 387 I~~~~~Da~~~~~~~~~~fD~VlvD~PCSg~G~lrr~pd~~~~~~~~~l~~l~~lQ~~lL~~A~ 450 (451)
+.++|+.++.....+.||+|++||||-. .+..++......+.+++..|.
T Consensus 265 --~~~~D~~~~l~~~~~~fD~Ii~dpP~f~-------------~~~~~~~~~~~~~~~ll~~a~ 313 (393)
T 4dmg_A 265 --IRHGEALPTLRGLEGPFHHVLLDPPTLV-------------KRPEELPAMKRHLVDLVREAL 313 (393)
T ss_dssp --EEESCHHHHHHTCCCCEEEEEECCCCCC-------------SSGGGHHHHHHHHHHHHHHHH
T ss_pred --EEEccHHHHHHHhcCCCCEEEECCCcCC-------------CCHHHHHHHHHHHHHHHHHHH
Confidence 5589998875433345999999999933 234456677777777777664
No 15
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.48 E-value=3.7e-14 Score=138.93 Aligned_cols=182 Identities=13% Similarity=0.108 Sum_probs=121.7
Q ss_pred HHHHHHHHHhh--CHHHHHHHHHHcCCCCCcEEEEcC--CCCCCHHHHHHHHh--cCCCCceeccCCCceEEEeCCCcch
Q 012998 231 VWMVRRWTKYL--GQEEAIKLMVWNNSDPSFSLRANS--RKGVTRADLVMQLN--LLKVPHELSLHLDEFIRVKTGLQNV 304 (451)
Q Consensus 231 ~wl~~~~~~~~--g~e~~~~~~~~~~~~~~~~lRvN~--~k~~~~~~~~~~L~--~~g~~~~~~~~~~~~~~~~~~~~~~ 304 (451)
.|..++|.+.+ +..+++.++......++.+++.|. ....+.+.+.+.+. ..+.|.. ++-+.- .+
T Consensus 21 ~~~~~~l~~~~~~~~~~a~~ll~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~p~~---yi~g~~-------~f 90 (284)
T 1nv8_A 21 RDCSGKLEGVTETSVLEVLLIVSRVLGIRKEDLFLKDLGVSPTEEKRILELVEKRASGYPLH---YILGEK-------EF 90 (284)
T ss_dssp HHHHHHTTTTCSCHHHHHHHHHHHHHTCCGGGGCCSSCCCCHHHHHHHHHHHHHHHTTCCHH---HHHTEE-------EE
T ss_pred HHHHHHHHhccCChHHHHHHHHHHHcCCCHHHHHhccccccccCHHHHHHHHHHHHCCCCCe---EEeeee-------EE
Confidence 56677766654 445677788877777777888776 33122334433332 2343321 110000 00
Q ss_pred hchh-hhhcCceeeecchhhhhhhhhC---CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHH
Q 012998 305 IQAG-LLKEGLCAVQDESAGLVVAVVD---PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKL 380 (451)
Q Consensus 305 ~~~~-~~~~G~~~vQd~as~l~~~~l~---~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~ 380 (451)
.... .+..|.+..+.....++..++. ..++.+|||+|||+|..++.++.. +..+|+|+|+|+.+++.+++|+++
T Consensus 91 ~~~~~~v~~~~lipr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~ 168 (284)
T 1nv8_A 91 MGLSFLVEEGVFVPRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAER 168 (284)
T ss_dssp TTEEEECCTTSCCCCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCeEEEeCCCceecChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHH
Confidence 0111 0123444444444444443332 346789999999999999999988 468999999999999999999999
Q ss_pred cCCCceEEEEcCccccccccCCCCc---CEEEEcCCCCCccccccCCcccc
Q 012998 381 HQVNSVIRTIHADLRTFADNSTVKC---DKVLLDAPCSGLGVLSKRADLRW 428 (451)
Q Consensus 381 ~g~~~~I~~~~~Da~~~~~~~~~~f---D~VlvD~PCSg~G~lrr~pd~~~ 428 (451)
+|+.++++++++|+..... ++| |+|++||||.+.+. ...++++|
T Consensus 169 ~~l~~~v~~~~~D~~~~~~---~~f~~~D~IvsnPPyi~~~~-~l~~~v~~ 215 (284)
T 1nv8_A 169 HGVSDRFFVRKGEFLEPFK---EKFASIEMILSNPPYVKSSA-HLPKDVLF 215 (284)
T ss_dssp TTCTTSEEEEESSTTGGGG---GGTTTCCEEEECCCCBCGGG-SCTTSCCC
T ss_pred cCCCCceEEEECcchhhcc---cccCCCCEEEEcCCCCCccc-ccChhhcc
Confidence 9998779999999987432 468 99999999999987 66677763
No 16
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.46 E-value=4.5e-13 Score=128.84 Aligned_cols=104 Identities=20% Similarity=0.275 Sum_probs=86.8
Q ss_pred cCceeeecch-------hhhhhhhhCCC-CCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCC
Q 012998 312 EGLCAVQDES-------AGLVVAVVDPQ-PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQV 383 (451)
Q Consensus 312 ~G~~~vQd~a-------s~l~~~~l~~~-~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~ 383 (451)
.+....|+.. +.+++.++.+. ++.+|||+|||+|..++.++... .+.|+|+|+++.+++.+++|++.+++
T Consensus 20 ~~~~i~q~~~~~~~~~d~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~--~~~v~gvDi~~~~~~~a~~n~~~~~~ 97 (259)
T 3lpm_A 20 ENLRIIQSPSVFSFSIDAVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRT--KAKIVGVEIQERLADMAKRSVAYNQL 97 (259)
T ss_dssp TTEEEEEBTTTBCCCHHHHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTC--CCEEEEECCSHHHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCCccCcHHHHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhc--CCcEEEEECCHHHHHHHHHHHHHCCC
Confidence 3444455555 78888888888 89999999999999999998873 34999999999999999999999999
Q ss_pred CceEEEEcCccccccccC-CCCcCEEEEcCCCCCc
Q 012998 384 NSVIRTIHADLRTFADNS-TVKCDKVLLDAPCSGL 417 (451)
Q Consensus 384 ~~~I~~~~~Da~~~~~~~-~~~fD~VlvD~PCSg~ 417 (451)
.++++++++|+.++.... .++||+|++||||...
T Consensus 98 ~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy~~~ 132 (259)
T 3lpm_A 98 EDQIEIIEYDLKKITDLIPKERADIVTCNPPYFAT 132 (259)
T ss_dssp TTTEEEECSCGGGGGGTSCTTCEEEEEECCCC---
T ss_pred cccEEEEECcHHHhhhhhccCCccEEEECCCCCCC
Confidence 877999999999876432 5789999999999776
No 17
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.44 E-value=1.1e-13 Score=134.38 Aligned_cols=114 Identities=12% Similarity=0.089 Sum_probs=88.9
Q ss_pred cCceeeecchhhhhhhhhCC--CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEE
Q 012998 312 EGLCAVQDESAGLVVAVVDP--QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRT 389 (451)
Q Consensus 312 ~G~~~vQd~as~l~~~~l~~--~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~ 389 (451)
.|.+..+.....++..+++. .++.+|||+|||+|..+..++...+ ...|+|+|+|+.+++.+++|++++|+.+ +++
T Consensus 86 ~~~~ipr~~te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~n~~~~~~~~-v~~ 163 (276)
T 2b3t_A 86 PATLIPRPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERP-DCEIIAVDRMPDAVSLAQRNAQHLAIKN-IHI 163 (276)
T ss_dssp TTSCCCCTTHHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCT-TSEEEEECSSHHHHHHHHHHHHHHTCCS-EEE
T ss_pred CCCcccCchHHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCc-eEE
Confidence 34444555555555544432 5678999999999999999998764 5799999999999999999999999985 999
Q ss_pred EcCccccccccCCCCcCEEEEcCCCCCcc-------ccccCCccccc
Q 012998 390 IHADLRTFADNSTVKCDKVLLDAPCSGLG-------VLSKRADLRWN 429 (451)
Q Consensus 390 ~~~Da~~~~~~~~~~fD~VlvD~PCSg~G-------~lrr~pd~~~~ 429 (451)
+++|+..... .++||+|+++|||.+.+ +++..|+..+.
T Consensus 164 ~~~d~~~~~~--~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~ 208 (276)
T 2b3t_A 164 LQSDWFSALA--GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALV 208 (276)
T ss_dssp ECCSTTGGGT--TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTB
T ss_pred EEcchhhhcc--cCCccEEEECCCCCCccccccChhhhhcCcHHHHc
Confidence 9999977532 46899999999999874 44445555543
No 18
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.43 E-value=3.9e-13 Score=127.22 Aligned_cols=117 Identities=23% Similarity=0.284 Sum_probs=91.8
Q ss_pred hhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc
Q 012998 321 SAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN 400 (451)
Q Consensus 321 as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~ 400 (451)
...++..+....++.+|||+|||+|..+..++.. .+.|+|+|+++.+++.++++++..|+.+++.++++|+..++.
T Consensus 66 ~~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~- 141 (241)
T 3gdh_A 66 AEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLAS- 141 (241)
T ss_dssp HHHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGG-
T ss_pred HHHHHHHhhhccCCCEEEECccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcc-
Confidence 3444444444557999999999999999999986 389999999999999999999999995559999999998763
Q ss_pred CCCCcCEEEEcCCCCCccccc-cCCcccccCCHhHHHHHHHHHH
Q 012998 401 STVKCDKVLLDAPCSGLGVLS-KRADLRWNRRLEDMEELKILQD 443 (451)
Q Consensus 401 ~~~~fD~VlvD~PCSg~G~lr-r~pd~~~~~~~~~l~~l~~lQ~ 443 (451)
.++||+|++|+||.+.+... ...++.+...+..+ -+...+.
T Consensus 142 -~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~-~i~~~~~ 183 (241)
T 3gdh_A 142 -FLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGF-EIFRLSK 183 (241)
T ss_dssp -GCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHH-HHHHHHH
T ss_pred -cCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcce-eHHHHHH
Confidence 47899999999999988755 33455555566555 3444333
No 19
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.42 E-value=4.9e-14 Score=136.91 Aligned_cols=158 Identities=16% Similarity=0.244 Sum_probs=96.3
Q ss_pred HHHcCCCCCcEEEEcCCCCCCHHHH-HHHHhcCCCCceeccCCCceE-EEeCCCcchhchhhhhcCceeeecchhhhhhh
Q 012998 250 MVWNNSDPSFSLRANSRKGVTRADL-VMQLNLLKVPHELSLHLDEFI-RVKTGLQNVIQAGLLKEGLCAVQDESAGLVVA 327 (451)
Q Consensus 250 ~~~~~~~~~~~lRvN~~k~~~~~~~-~~~L~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~G~~~vQd~as~l~~~ 327 (451)
+.++++.++++.|+|+.+ .+.+++ .+.|...++..... .....+ .+... .......+..+...+++..+.++..
T Consensus 29 ~~~~~~~~~~~~r~~~~~-~~~~~~~~~~l~g~~~g~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (275)
T 1yb2_A 29 LVSEDEYGKFDESTNSIL-VKGKMHHLGISRVIEPGDELI-VSGKSFIVSDFS--PMYFGRVIRRNTQIISEIDASYIIM 104 (275)
T ss_dssp EECSSCCEEEETTTTEEE-C-CCEEECC-CCCCCTTCEEE-ETTEEEEEECCC--GGGHHHHC-----------------
T ss_pred EEecCCCCceecccccee-ccCCccchhheeCCCCCcEEE-ECCeEEEEeCCC--HHHHHhhccccccccChhhHHHHHH
Confidence 446678888999998654 222111 11222222211111 122222 22221 1122244666777788888888888
Q ss_pred hhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc-CCCceEEEEcCccccccccCCCCcC
Q 012998 328 VVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH-QVNSVIRTIHADLRTFADNSTVKCD 406 (451)
Q Consensus 328 ~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~-g~~~~I~~~~~Da~~~~~~~~~~fD 406 (451)
.+++.++.+|||+|||+|..+..+++.+.+.++|+++|+++.+++.++++++.. |..+ ++++.+|+.... ..++||
T Consensus 105 ~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~-v~~~~~d~~~~~--~~~~fD 181 (275)
T 1yb2_A 105 RCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGN-VRTSRSDIADFI--SDQMYD 181 (275)
T ss_dssp -CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTT-EEEECSCTTTCC--CSCCEE
T ss_pred HcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCc-EEEEECchhccC--cCCCcc
Confidence 899999999999999999999999998766789999999999999999999998 8765 899999998732 246899
Q ss_pred EEEEcCCC
Q 012998 407 KVLLDAPC 414 (451)
Q Consensus 407 ~VlvD~PC 414 (451)
+|++|+|.
T Consensus 182 ~Vi~~~~~ 189 (275)
T 1yb2_A 182 AVIADIPD 189 (275)
T ss_dssp EEEECCSC
T ss_pred EEEEcCcC
Confidence 99999884
No 20
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.41 E-value=4.2e-13 Score=136.67 Aligned_cols=122 Identities=25% Similarity=0.239 Sum_probs=97.5
Q ss_pred hhhhhcCceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCce
Q 012998 307 AGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSV 386 (451)
Q Consensus 307 ~~~~~~G~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~ 386 (451)
...+..|+|..|.....++..+ +|.+|||+|||+|+++++++.. .+.|+++|+++.+++.+++|++.+|+.+
T Consensus 187 ~~~~~~g~f~~~~~~~~~~~~~----~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~- 258 (382)
T 1wxx_A 187 RAGQKTGAYLDQRENRLYMERF----RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGN- 258 (382)
T ss_dssp STTSCCCCCGGGHHHHHHGGGC----CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTT-
T ss_pred hhcccCccccchHHHHHHHHhc----CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCC-
Confidence 3457789999888877766654 6889999999999999999987 4789999999999999999999999988
Q ss_pred EEEEcCccccccccC---CCCcCEEEEcCCCCCccccccCCcccccCCHhHHHHHHHHHHHHHHHh
Q 012998 387 IRTIHADLRTFADNS---TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAA 449 (451)
Q Consensus 387 I~~~~~Da~~~~~~~---~~~fD~VlvD~PCSg~G~lrr~pd~~~~~~~~~l~~l~~lQ~~lL~~A 449 (451)
++++++|+.++.... ..+||+|++|||+.+.+ ...+......+.++|..+
T Consensus 259 ~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~~~~~-------------~~~~~~~~~~~~~~l~~~ 311 (382)
T 1wxx_A 259 VRVLEANAFDLLRRLEKEGERFDLVVLDPPAFAKG-------------KKDVERAYRAYKEVNLRA 311 (382)
T ss_dssp EEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCCS-------------TTSHHHHHHHHHHHHHHH
T ss_pred ceEEECCHHHHHHHHHhcCCCeeEEEECCCCCCCC-------------hhHHHHHHHHHHHHHHHH
Confidence 999999998764321 46899999999986632 223445555556666554
No 21
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.40 E-value=2.9e-12 Score=120.05 Aligned_cols=139 Identities=12% Similarity=0.060 Sum_probs=97.2
Q ss_pred CCHHHHHHHHhcCCCCc-----------eeccCCCceEEEeCCCcchhchhhhhcCceeeecch-hhhhhhhhC--CCCC
Q 012998 269 VTRADLVMQLNLLKVPH-----------ELSLHLDEFIRVKTGLQNVIQAGLLKEGLCAVQDES-AGLVVAVVD--PQPG 334 (451)
Q Consensus 269 ~~~~~~~~~L~~~g~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~vQd~a-s~l~~~~l~--~~~g 334 (451)
.+.+++++.|++.|+.. ....+.+.. .......+..+...++++. ...+...+. +.++
T Consensus 7 ~~~~~l~~~l~~~g~~~~~~~~~a~~~~~r~~f~~~~--------~y~~~~~~~~~~~~~~~p~~~~~~l~~l~~~~~~~ 78 (226)
T 1i1n_A 7 ASHSELIHNLRKNGIIKTDKVFEVMLATDRSHYAKCN--------PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEG 78 (226)
T ss_dssp SSHHHHHHHHHHTTSCCSHHHHHHHHTSCGGGTCSSC--------TTSSSCEEEETTEEECCHHHHHHHHHHTTTTSCTT
T ss_pred chHHHHHHHHHHcCCcCCHHHHHHHHhCCHHHcCCCc--------cCCCCccccCCCceecCHHHHHHHHHHHHhhCCCC
Confidence 67889999999988741 111222111 0111122222334444444 223334444 7789
Q ss_pred CeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCC----CceEEEEcCccccccccCCCCcCEEEE
Q 012998 335 QSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQV----NSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 335 ~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~----~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
.+|||+|||+|+++.+++..+++.++|+++|+++.+++.+++++...|+ .+++.++++|+..... ..++||+|++
T Consensus 79 ~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~i~~ 157 (226)
T 1i1n_A 79 AKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA-EEAPYDAIHV 157 (226)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG-GGCCEEEEEE
T ss_pred CEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcc-cCCCcCEEEE
Confidence 9999999999999999999887668999999999999999999999774 2348999999876432 2467999999
Q ss_pred cCCCCC
Q 012998 411 DAPCSG 416 (451)
Q Consensus 411 D~PCSg 416 (451)
+.+|..
T Consensus 158 ~~~~~~ 163 (226)
T 1i1n_A 158 GAAAPV 163 (226)
T ss_dssp CSBBSS
T ss_pred CCchHH
Confidence 999843
No 22
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.40 E-value=1e-12 Score=134.35 Aligned_cols=105 Identities=27% Similarity=0.278 Sum_probs=88.0
Q ss_pred hhhhcCceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceE
Q 012998 308 GLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVI 387 (451)
Q Consensus 308 ~~~~~G~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I 387 (451)
..++.|+|..|.....++..++ ++|++|||+|||+|++++.++.. +.++|+++|+++.+++.+++|++.+|+.+++
T Consensus 194 ~~~~tg~f~~~~~~~~~~~~~~--~~~~~VLDl~~G~G~~~~~la~~--g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v 269 (396)
T 2as0_A 194 RGQKTGFFLDQRENRLALEKWV--QPGDRVLDVFTYTGGFAIHAAIA--GADEVIGIDKSPRAIETAKENAKLNGVEDRM 269 (396)
T ss_dssp SSSSSCCCSTTHHHHHHHGGGC--CTTCEEEETTCTTTHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCGGGE
T ss_pred cccccCccCCHHHHHHHHHHHh--hCCCeEEEecCCCCHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHcCCCccc
Confidence 4567789988887777766553 47899999999999999999985 3569999999999999999999999997459
Q ss_pred EEEcCcccccccc---CCCCcCEEEEcCCCCC
Q 012998 388 RTIHADLRTFADN---STVKCDKVLLDAPCSG 416 (451)
Q Consensus 388 ~~~~~Da~~~~~~---~~~~fD~VlvD~PCSg 416 (451)
+++++|+.++... ..++||+|++|||+.+
T Consensus 270 ~~~~~d~~~~~~~~~~~~~~fD~Vi~dpP~~~ 301 (396)
T 2as0_A 270 KFIVGSAFEEMEKLQKKGEKFDIVVLDPPAFV 301 (396)
T ss_dssp EEEESCHHHHHHHHHHTTCCEEEEEECCCCSC
T ss_pred eEEECCHHHHHHHHHhhCCCCCEEEECCCCCC
Confidence 9999999876432 1468999999999865
No 23
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.39 E-value=6e-13 Score=124.74 Aligned_cols=103 Identities=16% Similarity=0.149 Sum_probs=88.0
Q ss_pred eeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcc
Q 012998 315 CAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL 394 (451)
Q Consensus 315 ~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da 394 (451)
+.+++..+.++..++...++.+|||+|||+|..|++++..+++.++|+++|+++.+++.+++++++.|+.++|+++++|+
T Consensus 40 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 119 (221)
T 3u81_A 40 MNVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGAS 119 (221)
T ss_dssp GGCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCH
Confidence 45666677777777777788999999999999999999988767899999999999999999999999987899999999
Q ss_pred ccccccCC-----CCcCEEEEcCCCCCc
Q 012998 395 RTFADNST-----VKCDKVLLDAPCSGL 417 (451)
Q Consensus 395 ~~~~~~~~-----~~fD~VlvD~PCSg~ 417 (451)
.+..+... ++||+|++|+++...
T Consensus 120 ~~~l~~~~~~~~~~~fD~V~~d~~~~~~ 147 (221)
T 3u81_A 120 QDLIPQLKKKYDVDTLDMVFLDHWKDRY 147 (221)
T ss_dssp HHHGGGTTTTSCCCCCSEEEECSCGGGH
T ss_pred HHHHHHHHHhcCCCceEEEEEcCCcccc
Confidence 77543332 689999999876553
No 24
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.38 E-value=1.4e-11 Score=125.04 Aligned_cols=197 Identities=11% Similarity=0.122 Sum_probs=125.0
Q ss_pred CchhHHHHHHHHHhhccCCCCCCCcCcCCchHHHHHHHHhhCChHHHHHHHHHhhCHHHHHHHHHHcCCCCCcEEEEcCC
Q 012998 187 AGNLVNGILRKLVLLKDNNSLPLPKLEGNDRAQARALATIYSHPVWMVRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSR 266 (451)
Q Consensus 187 ~~~fVNaVLr~i~r~~~~~~~~~~~~~~~~~~~~~~la~~~s~P~wl~~~~~~~~g~e~~~~~~~~~~~~~~~~lRvN~~ 266 (451)
..+++|++|+.+ +.. . ...+++..+++|.|.+++|.+.++.... ++. .. . +|.++.
T Consensus 41 ~~~~~~~ll~~L-~~~------~---------t~~eLa~~~g~~~~~v~~~L~~l~~~gl---l~~-~~--~--~~lt~~ 96 (373)
T 2qm3_A 41 YERSVENVLSAV-LAS------D---------DIWRIVDLSEEPLPLVVAILESLNELGY---VTF-ED--G--VKLTEK 96 (373)
T ss_dssp CHHHHHHHHHHH-HHC------S---------CHHHHHHHHTSCHHHHHHHHHHHHHTTS---EEC-SS--S--SEECHH
T ss_pred hHHHHHHHHHHh-cCC------C---------CHHHHHHHhCCChHHHHHHHHHHhhCCc---EEE-CC--C--EEECHH
Confidence 368999999999 421 1 1356788999999999999998864321 111 11 2 444332
Q ss_pred CCCCHHHHHHHHhcCCCCceeccCCCc----eEEEeCC-----------CcchhchhhhhcCceeeecchhhhhhhhh-C
Q 012998 267 KGVTRADLVMQLNLLKVPHELSLHLDE----FIRVKTG-----------LQNVIQAGLLKEGLCAVQDESAGLVVAVV-D 330 (451)
Q Consensus 267 k~~~~~~~~~~L~~~g~~~~~~~~~~~----~~~~~~~-----------~~~~~~~~~~~~G~~~vQd~as~l~~~~l-~ 330 (451)
..++... .+.....+...+. .+.+..- .........|.+++...|+..+.++.... .
T Consensus 97 ----~~~~l~~---~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 169 (373)
T 2qm3_A 97 ----GEELVAE---YGIGKRYDFTCPHCQGKTVDLQAFADLLEQFREIVKDRPEPLHEFDQAYVTPETTVARVILMHTRG 169 (373)
T ss_dssp ----HHHHHHH---HTCCCCCC------------CGGGHHHHHHHHHHHTTCCCCCGGGTCCCBCHHHHHHHHHHHHHTT
T ss_pred ----HHHHHHh---cCccccccccchhhcCCCcchhhhHHHHHHHHHHHhcCCccchhcCCeecCHHHHHHHHHHHhhcC
Confidence 1233332 2221111100000 0000000 00000112455667777777666654322 2
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccc-ccccCCCCcCEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT-FADNSTVKCDKVL 409 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~-~~~~~~~~fD~Vl 409 (451)
..+|.+|||+| |+|..+..++.. ++.++|+++|+++.+++.+++|++++|+. +|+++++|+.. ++....++||+|+
T Consensus 170 ~~~~~~VLDlG-G~G~~~~~la~~-~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~~~~~fD~Vi 246 (373)
T 2qm3_A 170 DLENKDIFVLG-DDDLTSIALMLS-GLPKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDYALHKFDTFI 246 (373)
T ss_dssp CSTTCEEEEES-CTTCHHHHHHHH-TCCSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTTTSSCBSEEE
T ss_pred CCCCCEEEEEC-CCCHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhhccCCccEEE
Confidence 34689999999 999999999875 33479999999999999999999999997 49999999988 4422346899999
Q ss_pred EcCCCCCc
Q 012998 410 LDAPCSGL 417 (451)
Q Consensus 410 vD~PCSg~ 417 (451)
+||||+..
T Consensus 247 ~~~p~~~~ 254 (373)
T 2qm3_A 247 TDPPETLE 254 (373)
T ss_dssp ECCCSSHH
T ss_pred ECCCCchH
Confidence 99999754
No 25
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.36 E-value=1e-12 Score=143.82 Aligned_cols=106 Identities=16% Similarity=0.251 Sum_probs=90.2
Q ss_pred hhhhcCceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC-ce
Q 012998 308 GLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN-SV 386 (451)
Q Consensus 308 ~~~~~G~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~-~~ 386 (451)
..++.|.|..|.....++.... +|.+|||+|||+|+++++++.. +..+|+++|+|+.+++.+++|++.+|+. ++
T Consensus 517 ~~~~tG~f~d~r~~r~~l~~~~---~g~~VLDlg~GtG~~sl~aa~~--ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~ 591 (703)
T 3v97_A 517 DYLDTGLFLDHRIARRMLGQMS---KGKDFLNLFSYTGSATVHAGLG--GARSTTTVDMSRTYLEWAERNLRLNGLTGRA 591 (703)
T ss_dssp SSSSCSCCGGGHHHHHHHHHHC---TTCEEEEESCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCSTT
T ss_pred ccccCCCcccHHHHHHHHHHhc---CCCcEEEeeechhHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHcCCCccc
Confidence 4578899999999888877654 5899999999999999998873 4567999999999999999999999997 45
Q ss_pred EEEEcCccccccccCCCCcCEEEEcCCCCCcc
Q 012998 387 IRTIHADLRTFADNSTVKCDKVLLDAPCSGLG 418 (451)
Q Consensus 387 I~~~~~Da~~~~~~~~~~fD~VlvD~PCSg~G 418 (451)
++++++|+..+.....++||+|++||||.+.+
T Consensus 592 v~~i~~D~~~~l~~~~~~fD~Ii~DPP~f~~~ 623 (703)
T 3v97_A 592 HRLIQADCLAWLREANEQFDLIFIDPPTFSNS 623 (703)
T ss_dssp EEEEESCHHHHHHHCCCCEEEEEECCCSBC--
T ss_pred eEEEecCHHHHHHhcCCCccEEEECCccccCC
Confidence 99999999886544457899999999997644
No 26
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.36 E-value=1e-12 Score=131.55 Aligned_cols=108 Identities=21% Similarity=0.232 Sum_probs=90.2
Q ss_pred hhhhcCceeeecchhhhhhhhhC-CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc-
Q 012998 308 GLLKEGLCAVQDESAGLVVAVVD-PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS- 385 (451)
Q Consensus 308 ~~~~~G~~~vQd~as~l~~~~l~-~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~- 385 (451)
..++.|+|..|......+...+. ..++.+|||+|||+|+.++.++.. + ..|+++|+|+.+++.+++|++.+|+.+
T Consensus 127 ~~~~tg~f~dq~~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~--g-a~V~~VD~s~~al~~a~~n~~~~gl~~~ 203 (332)
T 2igt_A 127 AFRHVGVFPEQIVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAA--G-AEVTHVDASKKAIGWAKENQVLAGLEQA 203 (332)
T ss_dssp SSSCCSCCGGGHHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHT--T-CEEEEECSCHHHHHHHHHHHHHHTCTTS
T ss_pred ccccceechHHHHHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHc--C-CEEEEEECCHHHHHHHHHHHHHcCCCcc
Confidence 44677888888887777776664 456889999999999999999884 2 499999999999999999999999976
Q ss_pred eEEEEcCccccccccC---CCCcCEEEEcCCCCCcc
Q 012998 386 VIRTIHADLRTFADNS---TVKCDKVLLDAPCSGLG 418 (451)
Q Consensus 386 ~I~~~~~Da~~~~~~~---~~~fD~VlvD~PCSg~G 418 (451)
++.++++|+.++.... .++||+|++||||.+.+
T Consensus 204 ~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~ 239 (332)
T 2igt_A 204 PIRWICEDAMKFIQREERRGSTYDIILTDPPKFGRG 239 (332)
T ss_dssp CEEEECSCHHHHHHHHHHHTCCBSEEEECCCSEEEC
T ss_pred ceEEEECcHHHHHHHHHhcCCCceEEEECCccccCC
Confidence 4899999998865321 46899999999998765
No 27
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.35 E-value=5.7e-13 Score=136.32 Aligned_cols=106 Identities=18% Similarity=0.195 Sum_probs=89.4
Q ss_pred hhhhhcCceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCC-Cc
Q 012998 307 AGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQV-NS 385 (451)
Q Consensus 307 ~~~~~~G~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~-~~ 385 (451)
...+++|+|..|.+...++..+ .+|.+|||+|||+|+++++++.. +.+.|+++|+++.+++.+++|++.+|+ .+
T Consensus 197 ~~~~~tgff~~~~~~~~~l~~~---~~~~~VLDl~cG~G~~sl~la~~--g~~~V~~vD~s~~al~~a~~n~~~ngl~~~ 271 (396)
T 3c0k_A 197 QHGHKTGYYLDQRDSRLATRRY---VENKRVLNCFSYTGGFAVSALMG--GCSQVVSVDTSQEALDIARQNVELNKLDLS 271 (396)
T ss_dssp TTSSTTSSCGGGHHHHHHHHHH---CTTCEEEEESCTTCSHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCGG
T ss_pred cccccCCcCcCHHHHHHHHHHh---hCCCeEEEeeccCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCcc
Confidence 3567889999998887777665 47899999999999999999985 346999999999999999999999999 64
Q ss_pred eEEEEcCccccccccC---CCCcCEEEEcCCCCCc
Q 012998 386 VIRTIHADLRTFADNS---TVKCDKVLLDAPCSGL 417 (451)
Q Consensus 386 ~I~~~~~Da~~~~~~~---~~~fD~VlvD~PCSg~ 417 (451)
+++++++|+..+.... ..+||+|++|||+.+.
T Consensus 272 ~v~~~~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~ 306 (396)
T 3c0k_A 272 KAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVE 306 (396)
T ss_dssp GEEEEESCHHHHHHHHHHTTCCEEEEEECCSSTTT
T ss_pred ceEEEECCHHHHHHHHHhcCCCCCEEEECCCCCCC
Confidence 5999999998764321 3689999999998663
No 28
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.35 E-value=3.8e-12 Score=120.98 Aligned_cols=82 Identities=18% Similarity=0.186 Sum_probs=68.7
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc--cCCCCcCE
Q 012998 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD--NSTVKCDK 407 (451)
Q Consensus 330 ~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~--~~~~~fD~ 407 (451)
.++||++|||+|||||++|.++|+.+++.|+|+|+|+++.+++.+.+.+++. .| |.++.+|++.... ...++||+
T Consensus 73 ~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r--~n-v~~i~~Da~~~~~~~~~~~~~D~ 149 (232)
T 3id6_C 73 PIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR--PN-IFPLLADARFPQSYKSVVENVDV 149 (232)
T ss_dssp SCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC--TT-EEEEECCTTCGGGTTTTCCCEEE
T ss_pred CCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc--CC-eEEEEcccccchhhhccccceEE
Confidence 3889999999999999999999999988899999999999987776666543 44 8899999987542 12468999
Q ss_pred EEEcCCC
Q 012998 408 VLLDAPC 414 (451)
Q Consensus 408 VlvD~PC 414 (451)
|++|.+-
T Consensus 150 I~~d~a~ 156 (232)
T 3id6_C 150 LYVDIAQ 156 (232)
T ss_dssp EEECCCC
T ss_pred EEecCCC
Confidence 9999773
No 29
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.34 E-value=1.5e-12 Score=124.64 Aligned_cols=99 Identities=14% Similarity=0.210 Sum_probs=84.1
Q ss_pred ecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccc
Q 012998 318 QDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF 397 (451)
Q Consensus 318 Qd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~ 397 (451)
+...+.++..++...++.+|||+|||+|+.|..++..+++.++|+++|+++.+++.+++++++.|+.++|+++.+|+.+.
T Consensus 48 ~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 127 (248)
T 3tfw_A 48 AANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQS 127 (248)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH
T ss_pred CHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH
Confidence 44555666666666788999999999999999999988767999999999999999999999999987799999999875
Q ss_pred cccCC--CCcCEEEEcCCCCC
Q 012998 398 ADNST--VKCDKVLLDAPCSG 416 (451)
Q Consensus 398 ~~~~~--~~fD~VlvD~PCSg 416 (451)
.+... ++||+|++|+++..
T Consensus 128 l~~~~~~~~fD~V~~d~~~~~ 148 (248)
T 3tfw_A 128 LESLGECPAFDLIFIDADKPN 148 (248)
T ss_dssp HHTCCSCCCCSEEEECSCGGG
T ss_pred HHhcCCCCCeEEEEECCchHH
Confidence 43332 48999999998765
No 30
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.33 E-value=1.4e-12 Score=133.06 Aligned_cols=106 Identities=11% Similarity=0.147 Sum_probs=86.6
Q ss_pred hhhhcCceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc-e
Q 012998 308 GLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS-V 386 (451)
Q Consensus 308 ~~~~~G~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~-~ 386 (451)
..+++|.|.-|.....++...+ .+|.+|||+|||+|+.++.+|.. +...|+++|+++.+++.+++|++.+|+.+ +
T Consensus 189 ~~~~t~ff~~~~~~~~~~~~~~--~~~~~VLDl~cGtG~~sl~la~~--ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~ 264 (385)
T 2b78_A 189 DGLMTGIFLDQRQVRNELINGS--AAGKTVLNLFSYTAAFSVAAAMG--GAMATTSVDLAKRSRALSLAHFEANHLDMAN 264 (385)
T ss_dssp SSSCCSSCGGGHHHHHHHHHTT--TBTCEEEEETCTTTHHHHHHHHT--TBSEEEEEESCTTHHHHHHHHHHHTTCCCTT
T ss_pred ccccCCcCCcHHHHHHHHHHHh--cCCCeEEEEeeccCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCccc
Confidence 4567788877877777776665 57899999999999999999874 34589999999999999999999999974 5
Q ss_pred EEEEcCcccccccc---CCCCcCEEEEcCCCCCc
Q 012998 387 IRTIHADLRTFADN---STVKCDKVLLDAPCSGL 417 (451)
Q Consensus 387 I~~~~~Da~~~~~~---~~~~fD~VlvD~PCSg~ 417 (451)
++++++|+.++.+. ...+||+|++|||+.+.
T Consensus 265 v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~ 298 (385)
T 2b78_A 265 HQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFAR 298 (385)
T ss_dssp EEEEESCHHHHHHHHHHTTCCEEEEEECCCCC--
T ss_pred eEEEECCHHHHHHHHHHhCCCccEEEECCCCCCC
Confidence 99999999875432 13589999999999753
No 31
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.32 E-value=3.1e-12 Score=120.58 Aligned_cols=87 Identities=13% Similarity=0.065 Sum_probs=76.0
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEEcCccccccccC-CCCcCE
Q 012998 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN-SVIRTIHADLRTFADNS-TVKCDK 407 (451)
Q Consensus 330 ~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~-~~I~~~~~Da~~~~~~~-~~~fD~ 407 (451)
.++++.+|||+|||+|..|+.++..+++.++|+++|+++.+++.+++++++.|+. ++|+++++|+.++.+.. .++||+
T Consensus 53 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~ 132 (221)
T 3dr5_A 53 NGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQL 132 (221)
T ss_dssp CCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEE
T ss_pred CCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCe
Confidence 3445569999999999999999999877799999999999999999999999998 67999999998875443 578999
Q ss_pred EEEcCCCCC
Q 012998 408 VLLDAPCSG 416 (451)
Q Consensus 408 VlvD~PCSg 416 (451)
|++|++...
T Consensus 133 V~~d~~~~~ 141 (221)
T 3dr5_A 133 VFGQVSPMD 141 (221)
T ss_dssp EEECCCTTT
T ss_pred EEEcCcHHH
Confidence 999987644
No 32
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.32 E-value=1.5e-12 Score=121.68 Aligned_cols=99 Identities=15% Similarity=0.162 Sum_probs=83.4
Q ss_pred ecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccc
Q 012998 318 QDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF 397 (451)
Q Consensus 318 Qd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~ 397 (451)
+...+.++..++...++.+|||+|||+|+.|.+++..+++.++|+++|+++.+++.+++++++.|+.++|+++++|+...
T Consensus 43 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 122 (223)
T 3duw_A 43 SPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDS 122 (223)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH
T ss_pred CHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH
Confidence 44555666666666778999999999999999999988767899999999999999999999999988899999999765
Q ss_pred cccC----CCCcCEEEEcCCCCC
Q 012998 398 ADNS----TVKCDKVLLDAPCSG 416 (451)
Q Consensus 398 ~~~~----~~~fD~VlvD~PCSg 416 (451)
.... .++||+|++|++|+.
T Consensus 123 ~~~~~~~~~~~fD~v~~d~~~~~ 145 (223)
T 3duw_A 123 LQQIENEKYEPFDFIFIDADKQN 145 (223)
T ss_dssp HHHHHHTTCCCCSEEEECSCGGG
T ss_pred HHHHHhcCCCCcCEEEEcCCcHH
Confidence 3221 257999999999774
No 33
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.32 E-value=3.2e-12 Score=124.57 Aligned_cols=85 Identities=24% Similarity=0.332 Sum_probs=76.4
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
+++|++|||+|||+|++++.+|.. +.++|+|+|+|+..++.+++|++.+|+.++|+++++|++.+.. .+.||+|++
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~--g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~--~~~~D~Vi~ 198 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVY--GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--ENIADRILM 198 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHH--TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--CSCEEEEEE
T ss_pred cCCCCEEEEecCcCcHHHHHHHHh--cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc--ccCCCEEEE
Confidence 468999999999999999999876 3468999999999999999999999999999999999998864 368999999
Q ss_pred cCCCCCccc
Q 012998 411 DAPCSGLGV 419 (451)
Q Consensus 411 D~PCSg~G~ 419 (451)
|+|+++...
T Consensus 199 ~~p~~~~~~ 207 (278)
T 3k6r_A 199 GYVVRTHEF 207 (278)
T ss_dssp CCCSSGGGG
T ss_pred CCCCcHHHH
Confidence 999987543
No 34
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.31 E-value=2.5e-12 Score=121.24 Aligned_cols=106 Identities=14% Similarity=0.158 Sum_probs=92.0
Q ss_pred hhcCceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEE
Q 012998 310 LKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRT 389 (451)
Q Consensus 310 ~~~G~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~ 389 (451)
...|...+|...+.++..++...++.+|||+|||+|..+..++..++ .++|+++|+++.+++.++++++..|+.++|.+
T Consensus 31 ~~~~~~~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~ 109 (233)
T 2gpy_A 31 HEQQVPIMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIEL 109 (233)
T ss_dssp HHTTCCCCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEE
T ss_pred HHcCCCCcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEE
Confidence 34577778888888888888888899999999999999999999875 58999999999999999999999999767999
Q ss_pred EcCccccccccC--CCCcCEEEEcCCCCC
Q 012998 390 IHADLRTFADNS--TVKCDKVLLDAPCSG 416 (451)
Q Consensus 390 ~~~Da~~~~~~~--~~~fD~VlvD~PCSg 416 (451)
+.+|+....+.. .+.||+|++|++|+.
T Consensus 110 ~~~d~~~~~~~~~~~~~fD~I~~~~~~~~ 138 (233)
T 2gpy_A 110 LFGDALQLGEKLELYPLFDVLFIDAAKGQ 138 (233)
T ss_dssp ECSCGGGSHHHHTTSCCEEEEEEEGGGSC
T ss_pred EECCHHHHHHhcccCCCccEEEECCCHHH
Confidence 999998753322 468999999999863
No 35
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.31 E-value=2.8e-12 Score=121.91 Aligned_cols=102 Identities=19% Similarity=0.142 Sum_probs=85.6
Q ss_pred eeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcc
Q 012998 315 CAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL 394 (451)
Q Consensus 315 ~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da 394 (451)
..++.....++..++...++.+|||+|||+|+.|+.++..+++.++|+++|+++.+++.+++++++.|+.++|+++.+|+
T Consensus 52 ~~~~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda 131 (237)
T 3c3y_A 52 MSTSPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDA 131 (237)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred CCcCHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 34455566666666666678899999999999999999998767999999999999999999999999987899999999
Q ss_pred ccccccC------CCCcCEEEEcCCCCC
Q 012998 395 RTFADNS------TVKCDKVLLDAPCSG 416 (451)
Q Consensus 395 ~~~~~~~------~~~fD~VlvD~PCSg 416 (451)
.+..+.. .++||+|++|++|..
T Consensus 132 ~~~l~~l~~~~~~~~~fD~I~~d~~~~~ 159 (237)
T 3c3y_A 132 MLALDNLLQGQESEGSYDFGFVDADKPN 159 (237)
T ss_dssp HHHHHHHHHSTTCTTCEEEEEECSCGGG
T ss_pred HHHHHHHHhccCCCCCcCEEEECCchHH
Confidence 8753321 468999999998763
No 36
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.30 E-value=6.9e-12 Score=114.78 Aligned_cols=85 Identities=15% Similarity=0.244 Sum_probs=76.4
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEE
Q 012998 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 409 (451)
Q Consensus 330 ~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vl 409 (451)
.+++|++|||+|||+|..+..++..+++.+.|+++|+++.+++.++++++..|+.++++++++|+..+.....++||+|+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~ 98 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVM 98 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEE
Confidence 46789999999999999999999998767899999999999999999999999955699999999888654567899999
Q ss_pred EcCCC
Q 012998 410 LDAPC 414 (451)
Q Consensus 410 vD~PC 414 (451)
+|+|.
T Consensus 99 ~~~~~ 103 (197)
T 3eey_A 99 FNLGY 103 (197)
T ss_dssp EEESB
T ss_pred EcCCc
Confidence 99876
No 37
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.30 E-value=5.6e-13 Score=127.33 Aligned_cols=103 Identities=17% Similarity=0.161 Sum_probs=88.1
Q ss_pred ceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCc
Q 012998 314 LCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHAD 393 (451)
Q Consensus 314 ~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~D 393 (451)
.+.++...+.++..++...++.+|||+|||+|..|+.+|..+++.++|+++|+++.+++.+++++++.|+.++|+++++|
T Consensus 41 ~~~i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd 120 (242)
T 3r3h_A 41 NMQVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGP 120 (242)
T ss_dssp GTSCCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESC
T ss_pred CCccCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC
Confidence 34566777777777777777889999999999999999999876799999999999999999999999998779999999
Q ss_pred cccccccC-----CCCcCEEEEcCCCCC
Q 012998 394 LRTFADNS-----TVKCDKVLLDAPCSG 416 (451)
Q Consensus 394 a~~~~~~~-----~~~fD~VlvD~PCSg 416 (451)
+.+..... .++||+|++|+++..
T Consensus 121 a~~~l~~~~~~~~~~~fD~V~~d~~~~~ 148 (242)
T 3r3h_A 121 ALDTLHSLLNEGGEHQFDFIFIDADKTN 148 (242)
T ss_dssp HHHHHHHHHHHHCSSCEEEEEEESCGGG
T ss_pred HHHHHHHHhhccCCCCEeEEEEcCChHH
Confidence 98764332 478999999998543
No 38
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.30 E-value=3.7e-12 Score=125.61 Aligned_cols=90 Identities=22% Similarity=0.320 Sum_probs=77.6
Q ss_pred hhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccC---
Q 012998 325 VVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS--- 401 (451)
Q Consensus 325 ~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~--- 401 (451)
++..+.+++|.+|||+|||+|+.|..+++..+ .++|+|+|+|+.+++.++++++.+| . +++++++|+.+++...
T Consensus 18 ~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g-~-~v~~v~~d~~~l~~~l~~~ 94 (301)
T 1m6y_A 18 VIEFLKPEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFS-D-RVSLFKVSYREADFLLKTL 94 (301)
T ss_dssp HHHHHCCCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGT-T-TEEEEECCGGGHHHHHHHT
T ss_pred HHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC-C-cEEEEECCHHHHHHHHHhc
Confidence 44667888999999999999999999999875 5899999999999999999999988 4 5999999998875311
Q ss_pred -CCCcCEEEEcCCCCCc
Q 012998 402 -TVKCDKVLLDAPCSGL 417 (451)
Q Consensus 402 -~~~fD~VlvD~PCSg~ 417 (451)
..+||.|++|+|||..
T Consensus 95 g~~~~D~Vl~D~gvSs~ 111 (301)
T 1m6y_A 95 GIEKVDGILMDLGVSTY 111 (301)
T ss_dssp TCSCEEEEEEECSCCHH
T ss_pred CCCCCCEEEEcCccchh
Confidence 1579999999999854
No 39
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.30 E-value=1.1e-11 Score=118.32 Aligned_cols=104 Identities=25% Similarity=0.351 Sum_probs=88.0
Q ss_pred hhcCceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEE
Q 012998 310 LKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRT 389 (451)
Q Consensus 310 ~~~G~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~ 389 (451)
+..+.-.+....+..+...+++.+|.+|||+|||+|..+..++..+++.++|+++|+++.+++.++++++..|+.+++++
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~ 149 (255)
T 3mb5_A 70 MKRGPQIVHPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTI 149 (255)
T ss_dssp SCCCSCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEE
T ss_pred CccccccccHhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEE
Confidence 33343334445556777788899999999999999999999999987779999999999999999999999999887999
Q ss_pred EcCccccccccCCCCcCEEEEcCCCC
Q 012998 390 IHADLRTFADNSTVKCDKVLLDAPCS 415 (451)
Q Consensus 390 ~~~Da~~~~~~~~~~fD~VlvD~PCS 415 (451)
+++|+.+.. ..++||.|++|+|+.
T Consensus 150 ~~~d~~~~~--~~~~~D~v~~~~~~~ 173 (255)
T 3mb5_A 150 KLKDIYEGI--EEENVDHVILDLPQP 173 (255)
T ss_dssp ECSCGGGCC--CCCSEEEEEECSSCG
T ss_pred EECchhhcc--CCCCcCEEEECCCCH
Confidence 999998653 346799999999975
No 40
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.29 E-value=1.2e-11 Score=117.41 Aligned_cols=86 Identities=17% Similarity=0.200 Sum_probs=74.3
Q ss_pred hCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc--cCCCCcC
Q 012998 329 VDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD--NSTVKCD 406 (451)
Q Consensus 329 l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~--~~~~~fD 406 (451)
+.++||++|||+|||+|..|.++|..+++.|+|+|+|+++.+++.+++++++.+ | +..+.+|+..... ...+.+|
T Consensus 73 l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~--n-i~~V~~d~~~p~~~~~~~~~vD 149 (233)
T 4df3_A 73 LPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRR--N-IFPILGDARFPEKYRHLVEGVD 149 (233)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCT--T-EEEEESCTTCGGGGTTTCCCEE
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhc--C-eeEEEEeccCccccccccceEE
Confidence 458999999999999999999999999999999999999999999999987754 4 7788888876432 2357899
Q ss_pred EEEEcCCCCCc
Q 012998 407 KVLLDAPCSGL 417 (451)
Q Consensus 407 ~VlvD~PCSg~ 417 (451)
+|++|.++...
T Consensus 150 vVf~d~~~~~~ 160 (233)
T 4df3_A 150 GLYADVAQPEQ 160 (233)
T ss_dssp EEEECCCCTTH
T ss_pred EEEEeccCChh
Confidence 99999998763
No 41
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.28 E-value=6.2e-12 Score=118.91 Aligned_cols=105 Identities=14% Similarity=0.136 Sum_probs=88.0
Q ss_pred cCceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEc
Q 012998 312 EGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIH 391 (451)
Q Consensus 312 ~G~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~ 391 (451)
.+...+|.....++..++...++.+|||+|||+|..+..++... +.++|+++|+++.+++.++++++..|+.++|+++.
T Consensus 50 ~~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~ 128 (232)
T 3ntv_A 50 NEVPIVDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYHFENQVRIIE 128 (232)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred cCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 34445566667777777777788999999999999999999854 36899999999999999999999999976699999
Q ss_pred Cccccccc-cCCCCcCEEEEcCCCCCc
Q 012998 392 ADLRTFAD-NSTVKCDKVLLDAPCSGL 417 (451)
Q Consensus 392 ~Da~~~~~-~~~~~fD~VlvD~PCSg~ 417 (451)
+|+.+..+ ...++||+|++|+++...
T Consensus 129 ~d~~~~~~~~~~~~fD~V~~~~~~~~~ 155 (232)
T 3ntv_A 129 GNALEQFENVNDKVYDMIFIDAAKAQS 155 (232)
T ss_dssp SCGGGCHHHHTTSCEEEEEEETTSSSH
T ss_pred CCHHHHHHhhccCCccEEEEcCcHHHH
Confidence 99987654 345789999999987754
No 42
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.28 E-value=3e-11 Score=121.48 Aligned_cols=96 Identities=27% Similarity=0.370 Sum_probs=81.5
Q ss_pred ecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccc
Q 012998 318 QDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF 397 (451)
Q Consensus 318 Qd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~ 397 (451)
+..-+..+..++..+++..|||+|||+|..++.++...++.+.|+|+|+++.+++.+++|++..|+. .|++.++|+.++
T Consensus 188 ~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~ 266 (354)
T 3tma_A 188 TPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHL 266 (354)
T ss_dssp CHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGG
T ss_pred CHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhC
Confidence 3333445556677888999999999999999999998645689999999999999999999999998 589999999987
Q ss_pred cccCCCCcCEEEEcCCCC
Q 012998 398 ADNSTVKCDKVLLDAPCS 415 (451)
Q Consensus 398 ~~~~~~~fD~VlvD~PCS 415 (451)
+.. ...||+|++||||.
T Consensus 267 ~~~-~~~~D~Ii~npPyg 283 (354)
T 3tma_A 267 PRF-FPEVDRILANPPHG 283 (354)
T ss_dssp GGT-CCCCSEEEECCCSC
T ss_pred ccc-cCCCCEEEECCCCc
Confidence 643 35689999999983
No 43
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.28 E-value=5.2e-12 Score=128.86 Aligned_cols=86 Identities=20% Similarity=0.144 Sum_probs=76.2
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCce-EEEEcCccccccc-cCCCCcCEEE
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSV-IRTIHADLRTFAD-NSTVKCDKVL 409 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~-I~~~~~Da~~~~~-~~~~~fD~Vl 409 (451)
++|.+|||+|||+|++++.+|..+++.++|+++|+++.+++.+++|++.+|+.++ ++++++|+..+.. ...+.||+|+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 5789999999999999999999865557999999999999999999999999887 9999999988764 4456899999
Q ss_pred EcCCCCCc
Q 012998 410 LDAPCSGL 417 (451)
Q Consensus 410 vD~PCSg~ 417 (451)
+||+|+..
T Consensus 131 lDP~g~~~ 138 (392)
T 3axs_A 131 LDPFGTPV 138 (392)
T ss_dssp ECCSSCCH
T ss_pred ECCCcCHH
Confidence 99987643
No 44
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.28 E-value=3e-12 Score=119.69 Aligned_cols=101 Identities=15% Similarity=0.161 Sum_probs=85.4
Q ss_pred eeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcc
Q 012998 315 CAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL 394 (451)
Q Consensus 315 ~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da 394 (451)
+.++.....++..++...++.+|||+|||+|..|.+++..+++.++|+++|+++.+++.++++++..|+.++|+++++|+
T Consensus 46 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 125 (225)
T 3tr6_A 46 MQTAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPA 125 (225)
T ss_dssp GSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCH
Confidence 44556666677777777788999999999999999999988767899999999999999999999999988899999999
Q ss_pred ccccccCC-----CCcCEEEEcCCCC
Q 012998 395 RTFADNST-----VKCDKVLLDAPCS 415 (451)
Q Consensus 395 ~~~~~~~~-----~~fD~VlvD~PCS 415 (451)
.+..+... ++||+|++|++..
T Consensus 126 ~~~~~~~~~~~~~~~fD~v~~~~~~~ 151 (225)
T 3tr6_A 126 KDTLAELIHAGQAWQYDLIYIDADKA 151 (225)
T ss_dssp HHHHHHHHTTTCTTCEEEEEECSCGG
T ss_pred HHHHHHhhhccCCCCccEEEECCCHH
Confidence 76533221 6899999999854
No 45
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.28 E-value=5.3e-12 Score=120.89 Aligned_cols=103 Identities=16% Similarity=0.155 Sum_probs=86.1
Q ss_pred ceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCc
Q 012998 314 LCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHAD 393 (451)
Q Consensus 314 ~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~D 393 (451)
...++.....++..++...++.+|||+|||+|+.|+.++..+++.++|+++|+++.+++.+++++++.|+.++|+++.+|
T Consensus 60 ~~~~~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gd 139 (247)
T 1sui_A 60 IMTTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGP 139 (247)
T ss_dssp GGSCCHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESC
T ss_pred CCCcCHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECC
Confidence 34456666667766666667889999999999999999999876789999999999999999999999997779999999
Q ss_pred cccccccC------CCCcCEEEEcCCCCC
Q 012998 394 LRTFADNS------TVKCDKVLLDAPCSG 416 (451)
Q Consensus 394 a~~~~~~~------~~~fD~VlvD~PCSg 416 (451)
+.+..+.. .++||+|++|+++..
T Consensus 140 a~~~l~~l~~~~~~~~~fD~V~~d~~~~~ 168 (247)
T 1sui_A 140 ALPVLDEMIKDEKNHGSYDFIFVDADKDN 168 (247)
T ss_dssp HHHHHHHHHHSGGGTTCBSEEEECSCSTT
T ss_pred HHHHHHHHHhccCCCCCEEEEEEcCchHH
Confidence 97753221 478999999998653
No 46
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.27 E-value=5.1e-12 Score=128.56 Aligned_cols=100 Identities=16% Similarity=0.159 Sum_probs=80.2
Q ss_pred ecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc---------------C
Q 012998 318 QDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH---------------Q 382 (451)
Q Consensus 318 Qd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~---------------g 382 (451)
|.....+....+...+|.+|||+|||+|.+++.++..++ ...|+++|+++.+++.+++|++.+ |
T Consensus 32 ~~~nr~l~~~~l~~~~~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~g 110 (378)
T 2dul_A 32 MALNRDIVVVLLNILNPKIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKG 110 (378)
T ss_dssp GHHHHHHHHHHHHHHCCSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEES
T ss_pred hHHHHHHHHHHHHHcCCCEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccC
Confidence 444444433333323689999999999999999999875 367999999999999999999999 8
Q ss_pred CCceEEEEcCccccccccCCCCcCEEEEcCCCCCccc
Q 012998 383 VNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGV 419 (451)
Q Consensus 383 ~~~~I~~~~~Da~~~~~~~~~~fD~VlvD~PCSg~G~ 419 (451)
+.+ ++++++|+..+.....+.||+|++||||+....
T Consensus 111 l~~-i~v~~~Da~~~~~~~~~~fD~I~lDP~~~~~~~ 146 (378)
T 2dul_A 111 EKT-IVINHDDANRLMAERHRYFHFIDLDPFGSPMEF 146 (378)
T ss_dssp SSE-EEEEESCHHHHHHHSTTCEEEEEECCSSCCHHH
T ss_pred CCc-eEEEcCcHHHHHHhccCCCCEEEeCCCCCHHHH
Confidence 876 999999998875433467999999999986543
No 47
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.26 E-value=1e-11 Score=119.77 Aligned_cols=98 Identities=18% Similarity=0.232 Sum_probs=82.5
Q ss_pred chhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHH---cCCCceEEEEcCcccc
Q 012998 320 ESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKL---HQVNSVIRTIHADLRT 396 (451)
Q Consensus 320 ~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~---~g~~~~I~~~~~Da~~ 396 (451)
..+.+++.++...++.+|||+|||+|..++.++...+ ...|+++|+++.+++.+++|++. +|+.++++++++|+.+
T Consensus 23 ~D~~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~ 101 (260)
T 2ozv_A 23 MDAMLLASLVADDRACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTL 101 (260)
T ss_dssp CHHHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTC
T ss_pred cHHHHHHHHhcccCCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHH
Confidence 4577888888888899999999999999999999864 47999999999999999999999 8988779999999988
Q ss_pred ccc------cCCCCcCEEEEcCCCCCcc
Q 012998 397 FAD------NSTVKCDKVLLDAPCSGLG 418 (451)
Q Consensus 397 ~~~------~~~~~fD~VlvD~PCSg~G 418 (451)
+.. ...++||+|++|||+...+
T Consensus 102 ~~~~~~~~~~~~~~fD~Vv~nPPy~~~~ 129 (260)
T 2ozv_A 102 RAKARVEAGLPDEHFHHVIMNPPYNDAG 129 (260)
T ss_dssp CHHHHHHTTCCTTCEEEEEECCCC----
T ss_pred HhhhhhhhccCCCCcCEEEECCCCcCCC
Confidence 732 2246899999999998764
No 48
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.25 E-value=1.9e-11 Score=111.36 Aligned_cols=82 Identities=17% Similarity=0.201 Sum_probs=71.2
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccC-CCCcCEEEE
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS-TVKCDKVLL 410 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~-~~~fD~Vlv 410 (451)
.++.+|||+|||+|..+..++.. +..+|+|+|+++.+++.+++|++..|+. +++++++|+.++.... .++||+|++
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~~fD~i~~ 119 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR--GAASVLFVESDQRSAAVIARNIEALGLS-GATLRRGAVAAVVAAGTTSPVDLVLA 119 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEECCHHHHHHHHHHHHHHTCS-CEEEEESCHHHHHHHCCSSCCSEEEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC--CCCeEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEccHHHHHhhccCCCccEEEE
Confidence 57899999999999999988774 4568999999999999999999999995 4999999998875422 578999999
Q ss_pred cCCCCC
Q 012998 411 DAPCSG 416 (451)
Q Consensus 411 D~PCSg 416 (451)
|+|...
T Consensus 120 ~~p~~~ 125 (189)
T 3p9n_A 120 DPPYNV 125 (189)
T ss_dssp CCCTTS
T ss_pred CCCCCc
Confidence 999654
No 49
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.24 E-value=1.8e-11 Score=119.14 Aligned_cols=95 Identities=21% Similarity=0.264 Sum_probs=79.4
Q ss_pred chhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc
Q 012998 320 ESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD 399 (451)
Q Consensus 320 ~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~ 399 (451)
.....+... .++|++|||+|||+|+.++.++.... .+|+|+|+++.+++.+++|++.+|+.++++++++|+.++..
T Consensus 114 ~~~~~l~~~--~~~~~~VLDlgcG~G~~~~~la~~~~--~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~ 189 (278)
T 2frn_A 114 KERVRMAKV--AKPDELVVDMFAGIGHLSLPIAVYGK--AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG 189 (278)
T ss_dssp HHHHHHHHH--CCTTCEEEETTCTTTTTHHHHHHHTC--CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC
T ss_pred HHHHHHHHh--CCCCCEEEEecccCCHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc
Confidence 444444444 45799999999999999999998732 27999999999999999999999998879999999998764
Q ss_pred cCCCCcCEEEEcCCCCCcccc
Q 012998 400 NSTVKCDKVLLDAPCSGLGVL 420 (451)
Q Consensus 400 ~~~~~fD~VlvD~PCSg~G~l 420 (451)
.++||+|++|+|++....+
T Consensus 190 --~~~fD~Vi~~~p~~~~~~l 208 (278)
T 2frn_A 190 --ENIADRILMGYVVRTHEFI 208 (278)
T ss_dssp --CSCEEEEEECCCSSGGGGH
T ss_pred --cCCccEEEECCchhHHHHH
Confidence 5789999999998765443
No 50
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.24 E-value=3.2e-11 Score=117.11 Aligned_cols=83 Identities=28% Similarity=0.303 Sum_probs=73.9
Q ss_pred hhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCE
Q 012998 328 VVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDK 407 (451)
Q Consensus 328 ~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~ 407 (451)
+..+.+|++|||+|||+|..++.+|...+ .++|+|+|+++.+++.+++|++.+|+.+ +.++++|+..+ +. .+.||+
T Consensus 114 ~~~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~~-~~~~~~d~~~~-~~-~~~~D~ 189 (272)
T 3a27_A 114 AFISNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLNN-VIPILADNRDV-EL-KDVADR 189 (272)
T ss_dssp HTSCCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCSS-EEEEESCGGGC-CC-TTCEEE
T ss_pred HHhcCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCC-EEEEECChHHc-Cc-cCCceE
Confidence 44567899999999999999999998754 5799999999999999999999999987 78999999987 33 568999
Q ss_pred EEEcCCC
Q 012998 408 VLLDAPC 414 (451)
Q Consensus 408 VlvD~PC 414 (451)
|++|+|.
T Consensus 190 Vi~d~p~ 196 (272)
T 3a27_A 190 VIMGYVH 196 (272)
T ss_dssp EEECCCS
T ss_pred EEECCcc
Confidence 9999997
No 51
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.24 E-value=3e-11 Score=113.26 Aligned_cols=86 Identities=8% Similarity=0.079 Sum_probs=71.7
Q ss_pred CCCCCCeEEeecCC-CchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEE
Q 012998 330 DPQPGQSIVDCCAA-PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKV 408 (451)
Q Consensus 330 ~~~~g~~VLDlcag-pG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~V 408 (451)
.++++.+|||+||| +|..+..++... .+.|+|+|+++.+++.+++|++..|+ + ++++++|+..+.....++||+|
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-~-v~~~~~d~~~~~~~~~~~fD~I 127 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS-N-VRLVKSNGGIIKGVVEGTFDVI 127 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC-C-CEEEECSSCSSTTTCCSCEEEE
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC-C-cEEEeCCchhhhhcccCceeEE
Confidence 35689999999999 999999999875 57999999999999999999999998 4 8899999765543335789999
Q ss_pred EEcCCCCCccc
Q 012998 409 LLDAPCSGLGV 419 (451)
Q Consensus 409 lvD~PCSg~G~ 419 (451)
++|||+...+.
T Consensus 128 ~~npp~~~~~~ 138 (230)
T 3evz_A 128 FSAPPYYDKPL 138 (230)
T ss_dssp EECCCCC----
T ss_pred EECCCCcCCcc
Confidence 99999877654
No 52
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.23 E-value=9.2e-12 Score=115.46 Aligned_cols=99 Identities=14% Similarity=0.106 Sum_probs=81.5
Q ss_pred eeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccc
Q 012998 316 AVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLR 395 (451)
Q Consensus 316 ~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~ 395 (451)
.++.....++..++...++.+|||+|||+|..|..++..+++.++|+++|+++.+++.++++++..|+.++++++++|+.
T Consensus 39 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 118 (210)
T 3c3p_A 39 IVDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPL 118 (210)
T ss_dssp CCCHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHH
T ss_pred CcCHHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHH
Confidence 34555555555555555678999999999999999999876568999999999999999999999999877999999998
Q ss_pred cccccCCCCcCEEEEcCCCC
Q 012998 396 TFADNSTVKCDKVLLDAPCS 415 (451)
Q Consensus 396 ~~~~~~~~~fD~VlvD~PCS 415 (451)
+..+...+ ||+|++|+++.
T Consensus 119 ~~~~~~~~-fD~v~~~~~~~ 137 (210)
T 3c3p_A 119 GIAAGQRD-IDILFMDCDVF 137 (210)
T ss_dssp HHHTTCCS-EEEEEEETTTS
T ss_pred HHhccCCC-CCEEEEcCChh
Confidence 76433346 99999998764
No 53
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.23 E-value=6.1e-11 Score=109.24 Aligned_cols=100 Identities=14% Similarity=0.188 Sum_probs=82.6
Q ss_pred cCceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEc
Q 012998 312 EGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIH 391 (451)
Q Consensus 312 ~G~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~ 391 (451)
+|.+ .+++....+...+.+.++.+|||+|||+|..+..++... +.++|+++|+++.+++.++++++..|+.+ +++++
T Consensus 20 ~g~~-~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~ 96 (204)
T 3e05_A 20 KKLI-TKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNLKKFVARN-VTLVE 96 (204)
T ss_dssp TTTS-CCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECCHHHHHHHHHHHHHHTCTT-EEEEE
T ss_pred CCcC-ChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEe
Confidence 3666 444555566677888999999999999999999999884 45899999999999999999999999965 99999
Q ss_pred CccccccccCCCCcCEEEEcCCCC
Q 012998 392 ADLRTFADNSTVKCDKVLLDAPCS 415 (451)
Q Consensus 392 ~Da~~~~~~~~~~fD~VlvD~PCS 415 (451)
+|+.+.... .+.||+|+++.+..
T Consensus 97 ~d~~~~~~~-~~~~D~i~~~~~~~ 119 (204)
T 3e05_A 97 AFAPEGLDD-LPDPDRVFIGGSGG 119 (204)
T ss_dssp CCTTTTCTT-SCCCSEEEESCCTT
T ss_pred CChhhhhhc-CCCCCEEEECCCCc
Confidence 999665432 26799999998754
No 54
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.23 E-value=2.9e-11 Score=108.63 Aligned_cols=83 Identities=19% Similarity=0.279 Sum_probs=72.2
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
..++.+|||+|||+|..+..++.. +.+.|+++|+++.+++.++++++..|+.+++.++++|+.++.....+.||+|++
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~ 106 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSR--GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFL 106 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEE
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEE
Confidence 567889999999999999999886 347999999999999999999999999767999999998854334467999999
Q ss_pred cCCCC
Q 012998 411 DAPCS 415 (451)
Q Consensus 411 D~PCS 415 (451)
|+|+.
T Consensus 107 ~~~~~ 111 (177)
T 2esr_A 107 DPPYA 111 (177)
T ss_dssp CCSSH
T ss_pred CCCCC
Confidence 99973
No 55
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.21 E-value=3.3e-11 Score=109.09 Aligned_cols=80 Identities=14% Similarity=0.171 Sum_probs=69.2
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
+.+|++|||+|||+|..|..++.. .++|+|+|+++.+++.++++++..|+.+ +++++.|+..+....+++||.|++
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~~-v~~~~~~~~~l~~~~~~~fD~v~~ 95 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGIEN-TELILDGHENLDHYVREPIRAAIF 95 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTCCC-EEEEESCGGGGGGTCCSCEEEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCc-EEEEeCcHHHHHhhccCCcCEEEE
Confidence 567999999999999999999986 5899999999999999999999999964 899998888765444678999999
Q ss_pred cCCC
Q 012998 411 DAPC 414 (451)
Q Consensus 411 D~PC 414 (451)
++++
T Consensus 96 ~~~~ 99 (185)
T 3mti_A 96 NLGY 99 (185)
T ss_dssp EEC-
T ss_pred eCCC
Confidence 8643
No 56
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.21 E-value=8e-11 Score=109.23 Aligned_cols=91 Identities=12% Similarity=0.213 Sum_probs=77.1
Q ss_pred ecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccc
Q 012998 318 QDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF 397 (451)
Q Consensus 318 Qd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~ 397 (451)
+.+-..++...+++.++++|||+|||+|..+..++.. .++|+++|+++.+++.++++++++|+.++++++++|+.+.
T Consensus 40 ~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 116 (204)
T 3njr_A 40 KSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA 116 (204)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG
T ss_pred cHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh
Confidence 3344455667788899999999999999999999987 5799999999999999999999999984599999999884
Q ss_pred cccCCCCcCEEEEcC
Q 012998 398 ADNSTVKCDKVLLDA 412 (451)
Q Consensus 398 ~~~~~~~fD~VlvD~ 412 (451)
... ...||.|+++.
T Consensus 117 ~~~-~~~~D~v~~~~ 130 (204)
T 3njr_A 117 LAD-LPLPEAVFIGG 130 (204)
T ss_dssp GTT-SCCCSEEEECS
T ss_pred ccc-CCCCCEEEECC
Confidence 332 25799999887
No 57
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.19 E-value=9.7e-11 Score=108.18 Aligned_cols=99 Identities=15% Similarity=0.142 Sum_probs=83.7
Q ss_pred cCceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEc
Q 012998 312 EGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIH 391 (451)
Q Consensus 312 ~G~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~ 391 (451)
.|.+..+......+...+.+.++.+|||+|||+|..+..++.. .++|+++|+++.+++.++++++..|+.+ +++++
T Consensus 56 ~~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~~~ 131 (210)
T 3lbf_A 56 QGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDLHN-VSTRH 131 (210)
T ss_dssp TSCEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEE
T ss_pred CCCEeCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCc-eEEEE
Confidence 3555556666666777888899999999999999999999987 4799999999999999999999999986 99999
Q ss_pred CccccccccCCCCcCEEEEcCCCC
Q 012998 392 ADLRTFADNSTVKCDKVLLDAPCS 415 (451)
Q Consensus 392 ~Da~~~~~~~~~~fD~VlvD~PCS 415 (451)
+|+...... .++||+|+++..+.
T Consensus 132 ~d~~~~~~~-~~~~D~i~~~~~~~ 154 (210)
T 3lbf_A 132 GDGWQGWQA-RAPFDAIIVTAAPP 154 (210)
T ss_dssp SCGGGCCGG-GCCEEEEEESSBCS
T ss_pred CCcccCCcc-CCCccEEEEccchh
Confidence 999875432 46899999986553
No 58
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.19 E-value=6.8e-11 Score=112.82 Aligned_cols=85 Identities=9% Similarity=0.125 Sum_probs=70.7
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccc-ccc-cC---CCCcCE
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT-FAD-NS---TVKCDK 407 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~-~~~-~~---~~~fD~ 407 (451)
++.+|||+|||+|..+..++...+ .++|+|+|+++.+++.+++|++..|+.++++++++|+.+ +.. .. +++||+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLN-GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 578999999999999999998764 479999999999999999999999998779999999865 221 11 258999
Q ss_pred EEEcCCCCCcc
Q 012998 408 VLLDAPCSGLG 418 (451)
Q Consensus 408 VlvD~PCSg~G 418 (451)
|++|||+...+
T Consensus 144 i~~npp~~~~~ 154 (254)
T 2h00_A 144 CMCNPPFFANQ 154 (254)
T ss_dssp EEECCCCC---
T ss_pred EEECCCCccCc
Confidence 99999998766
No 59
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.19 E-value=5e-11 Score=110.34 Aligned_cols=79 Identities=16% Similarity=0.228 Sum_probs=68.5
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEEcC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDA 412 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD~ 412 (451)
++.+|||+|||+|..++.++.. +...|+++|+++.+++.+++|++..|+.+ ++++++|+.++.....++||+|++|+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~--~~~~V~~vD~s~~~l~~a~~~~~~~~~~~-v~~~~~D~~~~~~~~~~~fD~V~~~~ 130 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSR--YAAGATLIEMDRAVSQQLIKNLATLKAGN-ARVVNSNAMSFLAQKGTPHNIVFVDP 130 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTTCCS-EEEECSCHHHHHSSCCCCEEEEEECC
T ss_pred CCCeEEEeCCCcCHHHHHHHhc--CCCEEEEEECCHHHHHHHHHHHHHcCCCc-EEEEECCHHHHHhhcCCCCCEEEECC
Confidence 6889999999999999987765 23589999999999999999999999854 99999999885443456899999999
Q ss_pred CC
Q 012998 413 PC 414 (451)
Q Consensus 413 PC 414 (451)
|.
T Consensus 131 p~ 132 (202)
T 2fpo_A 131 PF 132 (202)
T ss_dssp SS
T ss_pred CC
Confidence 94
No 60
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.18 E-value=8.8e-11 Score=113.78 Aligned_cols=92 Identities=15% Similarity=0.255 Sum_probs=80.4
Q ss_pred hhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccC
Q 012998 322 AGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS 401 (451)
Q Consensus 322 s~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~ 401 (451)
...++..+++.++.+|||+|||+|..+..++..+++.++|+++|+++.+++.++++++..|+.++++++.+|+.+.. .
T Consensus 101 ~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~ 178 (277)
T 1o54_A 101 SSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGF--D 178 (277)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCC--S
T ss_pred HHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcc--c
Confidence 34556677889999999999999999999999877678999999999999999999999998556999999998762 2
Q ss_pred CCCcCEEEEcCCCC
Q 012998 402 TVKCDKVLLDAPCS 415 (451)
Q Consensus 402 ~~~fD~VlvD~PCS 415 (451)
.+.||+|++|+|+.
T Consensus 179 ~~~~D~V~~~~~~~ 192 (277)
T 1o54_A 179 EKDVDALFLDVPDP 192 (277)
T ss_dssp CCSEEEEEECCSCG
T ss_pred CCccCEEEECCcCH
Confidence 36799999999975
No 61
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.18 E-value=4.3e-11 Score=110.65 Aligned_cols=80 Identities=18% Similarity=0.179 Sum_probs=68.4
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEEcCcccccccc-CCCC-cCEEE
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN-SVIRTIHADLRTFADN-STVK-CDKVL 409 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~-~~I~~~~~Da~~~~~~-~~~~-fD~Vl 409 (451)
++.+|||+|||+|..++.++.. +.+.|+++|+|+.+++.+++|++..|+. ++++++++|+.++... ..++ ||+|+
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 130 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSR--QAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVF 130 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHc--cCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEE
Confidence 6889999999999999987765 3368999999999999999999999983 2499999999886532 2468 99999
Q ss_pred EcCCC
Q 012998 410 LDAPC 414 (451)
Q Consensus 410 vD~PC 414 (451)
+|+|+
T Consensus 131 ~~~~~ 135 (201)
T 2ift_A 131 LDPPF 135 (201)
T ss_dssp ECCCS
T ss_pred ECCCC
Confidence 99995
No 62
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.17 E-value=5.5e-11 Score=120.46 Aligned_cols=87 Identities=18% Similarity=0.330 Sum_probs=72.2
Q ss_pred hhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccC-C---
Q 012998 327 AVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS-T--- 402 (451)
Q Consensus 327 ~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~-~--- 402 (451)
..++.. +.+|||+|||+|.+|+.+|.. .++|+|+|+++.+++.+++|++.+|+++ ++++++|+.++.... .
T Consensus 208 ~~~~~~-~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~~~-v~~~~~d~~~~~~~~~~~~~ 282 (369)
T 3bt7_A 208 DVTKGS-KGDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHIDN-VQIIRMAAEEFTQAMNGVRE 282 (369)
T ss_dssp HHTTTC-CSEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTCCS-EEEECCCSHHHHHHHSSCCC
T ss_pred HHhhcC-CCEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEECCHHHHHHHHhhccc
Confidence 334443 678999999999999988864 4689999999999999999999999975 999999998764311 1
Q ss_pred -----------CCcCEEEEcCCCCCcc
Q 012998 403 -----------VKCDKVLLDAPCSGLG 418 (451)
Q Consensus 403 -----------~~fD~VlvD~PCSg~G 418 (451)
..||+|++|||+.|..
T Consensus 283 ~~~l~~~~~~~~~fD~Vv~dPPr~g~~ 309 (369)
T 3bt7_A 283 FNRLQGIDLKSYQCETIFVDPPRSGLD 309 (369)
T ss_dssp CTTGGGSCGGGCCEEEEEECCCTTCCC
T ss_pred cccccccccccCCCCEEEECcCccccH
Confidence 2799999999998754
No 63
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.16 E-value=8.1e-11 Score=121.80 Aligned_cols=90 Identities=22% Similarity=0.254 Sum_probs=77.0
Q ss_pred hhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc---cCC
Q 012998 326 VAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---NST 402 (451)
Q Consensus 326 ~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~---~~~ 402 (451)
...+.+.++++|||+|||+|..++.++.. .+.|+|+|+++.+++.+++|++.+|+.+ ++++++|+.+... ...
T Consensus 279 ~~~l~~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~~~-v~f~~~d~~~~l~~~~~~~ 354 (433)
T 1uwv_A 279 LEWLDVQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGLQN-VTFYHENLEEDVTKQPWAK 354 (433)
T ss_dssp HHHHTCCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEECCTTSCCSSSGGGT
T ss_pred HHhhcCCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCCCc-eEEEECCHHHHhhhhhhhc
Confidence 34556778899999999999999999986 5799999999999999999999999985 9999999987432 124
Q ss_pred CCcCEEEEcCCCCCccc
Q 012998 403 VKCDKVLLDAPCSGLGV 419 (451)
Q Consensus 403 ~~fD~VlvD~PCSg~G~ 419 (451)
++||+|++|||++|.+-
T Consensus 355 ~~fD~Vv~dPPr~g~~~ 371 (433)
T 1uwv_A 355 NGFDKVLLDPARAGAAG 371 (433)
T ss_dssp TCCSEEEECCCTTCCHH
T ss_pred CCCCEEEECCCCccHHH
Confidence 58999999999998753
No 64
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.16 E-value=6.9e-11 Score=110.63 Aligned_cols=92 Identities=18% Similarity=0.260 Sum_probs=75.9
Q ss_pred hhhhhh--CCCCCCeEEeecCCCchHHHHHHHHcC----CCceEEEEeCCHHHHHHHHHHHHHcC-----CCceEEEEcC
Q 012998 324 LVVAVV--DPQPGQSIVDCCAAPGGKTLYMASCLS----GQGLVYAIDINKGRLRILNETAKLHQ-----VNSVIRTIHA 392 (451)
Q Consensus 324 l~~~~l--~~~~g~~VLDlcagpG~kT~~la~~~~----~~g~V~AvDi~~~rl~~l~~~~~~~g-----~~~~I~~~~~ 392 (451)
.+...+ .+.++.+|||+|||+|..+..++...+ +.++|+++|+++.+++.++++++..| ..+ ++++.+
T Consensus 69 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~-v~~~~~ 147 (227)
T 2pbf_A 69 LSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDN-FKIIHK 147 (227)
T ss_dssp HHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTT-EEEEEC
T ss_pred HHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCC-EEEEEC
Confidence 344455 578899999999999999999999875 56799999999999999999999988 454 899999
Q ss_pred ccccccc---cCCCCcCEEEEcCCCCC
Q 012998 393 DLRTFAD---NSTVKCDKVLLDAPCSG 416 (451)
Q Consensus 393 Da~~~~~---~~~~~fD~VlvD~PCSg 416 (451)
|+..... ...++||+|+++.++..
T Consensus 148 d~~~~~~~~~~~~~~fD~I~~~~~~~~ 174 (227)
T 2pbf_A 148 NIYQVNEEEKKELGLFDAIHVGASASE 174 (227)
T ss_dssp CGGGCCHHHHHHHCCEEEEEECSBBSS
T ss_pred ChHhcccccCccCCCcCEEEECCchHH
Confidence 9987430 12367999999998763
No 65
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.16 E-value=1.2e-10 Score=107.30 Aligned_cols=79 Identities=18% Similarity=0.278 Sum_probs=69.5
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEE
Q 012998 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 409 (451)
Q Consensus 330 ~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vl 409 (451)
.+.++.+|||+|||+|..+..++.. +.+.|+|+|+++.+++.++++++..|+ + ++++++|+..++ .+||+|+
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~-~-~~~~~~d~~~~~----~~~D~v~ 117 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLL--GAKEVICVEVDKEAVDVLIENLGEFKG-K-FKVFIGDVSEFN----SRVDIVI 117 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHTGGGTT-S-EEEEESCGGGCC----CCCSEEE
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCC-C-EEEEECchHHcC----CCCCEEE
Confidence 4567899999999999999999886 345899999999999999999999998 4 899999998864 4799999
Q ss_pred EcCCCCC
Q 012998 410 LDAPCSG 416 (451)
Q Consensus 410 vD~PCSg 416 (451)
+|||+.-
T Consensus 118 ~~~p~~~ 124 (207)
T 1wy7_A 118 MNPPFGS 124 (207)
T ss_dssp ECCCCSS
T ss_pred EcCCCcc
Confidence 9999744
No 66
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.16 E-value=7.1e-11 Score=119.86 Aligned_cols=90 Identities=17% Similarity=0.159 Sum_probs=76.7
Q ss_pred hhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCC
Q 012998 323 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 402 (451)
Q Consensus 323 ~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~ 402 (451)
..+...+ ..++.+|||+|||+|+.++.++... ..+.|+|+|+++.+++.+++|++..|+.+.|+++++|+.+++. ..
T Consensus 208 ~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~-~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~-~~ 284 (373)
T 3tm4_A 208 NAMIELA-ELDGGSVLDPMCGSGTILIELALRR-YSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQ-YV 284 (373)
T ss_dssp HHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTT-CCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGG-TC
T ss_pred HHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCc-cc
Confidence 3344455 7889999999999999999998863 3468999999999999999999999996669999999998763 34
Q ss_pred CCcCEEEEcCCCC
Q 012998 403 VKCDKVLLDAPCS 415 (451)
Q Consensus 403 ~~fD~VlvD~PCS 415 (451)
++||+|++|||..
T Consensus 285 ~~fD~Ii~npPyg 297 (373)
T 3tm4_A 285 DSVDFAISNLPYG 297 (373)
T ss_dssp SCEEEEEEECCCC
T ss_pred CCcCEEEECCCCC
Confidence 7899999999963
No 67
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.15 E-value=3.7e-11 Score=112.52 Aligned_cols=101 Identities=15% Similarity=0.095 Sum_probs=81.7
Q ss_pred eeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcc
Q 012998 315 CAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL 394 (451)
Q Consensus 315 ~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da 394 (451)
+.+......++..++...++.+|||+|||+|..+..++..+++.++|+++|+++.+++.++++++..|+.++++++++|+
T Consensus 51 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~ 130 (229)
T 2avd_A 51 SMMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPA 130 (229)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred CccCHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCH
Confidence 34444445555556666778999999999999999999987767899999999999999999999999976799999998
Q ss_pred ccccccC--C---CCcCEEEEcCCCC
Q 012998 395 RTFADNS--T---VKCDKVLLDAPCS 415 (451)
Q Consensus 395 ~~~~~~~--~---~~fD~VlvD~PCS 415 (451)
.+..... . ++||+|++|+|..
T Consensus 131 ~~~~~~~~~~~~~~~~D~v~~d~~~~ 156 (229)
T 2avd_A 131 LETLDELLAAGEAGTFDVAVVDADKE 156 (229)
T ss_dssp HHHHHHHHHTTCTTCEEEEEECSCST
T ss_pred HHHHHHHHhcCCCCCccEEEECCCHH
Confidence 7653211 1 6899999999843
No 68
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.15 E-value=6.4e-11 Score=116.66 Aligned_cols=97 Identities=11% Similarity=0.089 Sum_probs=79.4
Q ss_pred eeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcc
Q 012998 315 CAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL 394 (451)
Q Consensus 315 ~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da 394 (451)
|..+......++..+++.++++|||+|||+|..|..+++. .+.|+|+|+++.+++.++++++..|+.+ ++++++|+
T Consensus 24 fl~~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~~~-v~~~~~D~ 99 (299)
T 2h1r_A 24 LLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGYNN-LEVYEGDA 99 (299)
T ss_dssp EECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTCCC-EEC----C
T ss_pred eecCHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEECch
Confidence 4556666777778888889999999999999999999875 4799999999999999999999888865 89999999
Q ss_pred ccccccCCCCcCEEEEcCCCCCcc
Q 012998 395 RTFADNSTVKCDKVLLDAPCSGLG 418 (451)
Q Consensus 395 ~~~~~~~~~~fD~VlvD~PCSg~G 418 (451)
..++. ..||.|++|+|+..+.
T Consensus 100 ~~~~~---~~~D~Vv~n~py~~~~ 120 (299)
T 2h1r_A 100 IKTVF---PKFDVCTANIPYKISS 120 (299)
T ss_dssp CSSCC---CCCSEEEEECCGGGHH
T ss_pred hhCCc---ccCCEEEEcCCccccc
Confidence 87652 4799999999987653
No 69
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.14 E-value=1.7e-10 Score=114.22 Aligned_cols=97 Identities=11% Similarity=0.149 Sum_probs=82.6
Q ss_pred chhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc
Q 012998 320 ESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD 399 (451)
Q Consensus 320 ~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~ 399 (451)
.....+...+.+++|++|||+|||+|..+..++...+..++|+++|+++.+++.++++++..|+.+ ++++.+|+.....
T Consensus 62 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~-v~~~~~d~~~~~~ 140 (317)
T 1dl5_A 62 SLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIEN-VIFVCGDGYYGVP 140 (317)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEESCGGGCCG
T ss_pred HHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCC-eEEEECChhhccc
Confidence 444556667788999999999999999999999986545789999999999999999999999987 9999999987543
Q ss_pred cCCCCcCEEEEcCCCCCcc
Q 012998 400 NSTVKCDKVLLDAPCSGLG 418 (451)
Q Consensus 400 ~~~~~fD~VlvD~PCSg~G 418 (451)
..++||+|+++.++...+
T Consensus 141 -~~~~fD~Iv~~~~~~~~~ 158 (317)
T 1dl5_A 141 -EFSPYDVIFVTVGVDEVP 158 (317)
T ss_dssp -GGCCEEEEEECSBBSCCC
T ss_pred -cCCCeEEEEEcCCHHHHH
Confidence 236899999999886554
No 70
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.13 E-value=1.7e-10 Score=113.05 Aligned_cols=81 Identities=15% Similarity=0.072 Sum_probs=69.0
Q ss_pred hhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCE
Q 012998 328 VVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDK 407 (451)
Q Consensus 328 ~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~ 407 (451)
++++++|++|||+|||+|+.|..++.... +++|+++|+++.+++.+++++++.|+ ++|+++++|+..++ +++||+
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~-ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~---d~~FDv 191 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSHVY-GMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVID---GLEFDV 191 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHHTT-CCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGG---GCCCSE
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCC---CCCcCE
Confidence 46788999999999999998865544433 58999999999999999999999999 56999999999875 378999
Q ss_pred EEEcCC
Q 012998 408 VLLDAP 413 (451)
Q Consensus 408 VlvD~P 413 (451)
|++++-
T Consensus 192 V~~~a~ 197 (298)
T 3fpf_A 192 LMVAAL 197 (298)
T ss_dssp EEECTT
T ss_pred EEECCC
Confidence 998653
No 71
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.12 E-value=2.4e-11 Score=111.74 Aligned_cols=87 Identities=15% Similarity=0.168 Sum_probs=53.8
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---CCCCcCEE
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---STVKCDKV 408 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---~~~~fD~V 408 (451)
.++.+|||+|||+|..+..++...+ .++|+++|+++.+++.+++++...|. + ++++++|+...... ..++||+|
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~-~-~~~~~~d~~~~~~~~~~~~~~fD~i 105 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACP-GVSVTAVDLSMDALAVARRNAERFGA-V-VDWAAADGIEWLIERAERGRPWHAI 105 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCT-TEEEEEEECC---------------------CCHHHHHHHHHHHHHTTCCBSEE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhCC-c-eEEEEcchHhhhhhhhhccCcccEE
Confidence 6789999999999999999999853 47999999999999999999999988 3 88999999874321 13789999
Q ss_pred EEcCCCCCccccc
Q 012998 409 LLDAPCSGLGVLS 421 (451)
Q Consensus 409 lvD~PCSg~G~lr 421 (451)
++|||+...+.+.
T Consensus 106 ~~npp~~~~~~~~ 118 (215)
T 4dzr_A 106 VSNPPYIPTGEID 118 (215)
T ss_dssp EECCCCCC-----
T ss_pred EECCCCCCCcccc
Confidence 9999998777653
No 72
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.12 E-value=1.6e-10 Score=103.34 Aligned_cols=102 Identities=15% Similarity=0.200 Sum_probs=78.1
Q ss_pred cCceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEc
Q 012998 312 EGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIH 391 (451)
Q Consensus 312 ~G~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~ 391 (451)
+|.+..++.. ..+...+.+.++.+|||+|||+|..+..++...+ .++|+++|+++.+++.++++++..|+.+++ +++
T Consensus 5 ~g~~t~~~~~-~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~ 81 (178)
T 3hm2_A 5 DGQLTKQHVR-ALAISALAPKPHETLWDIGGGSGSIAIEWLRSTP-QTTAVCFEISEERRERILSNAINLGVSDRI-AVQ 81 (178)
T ss_dssp -CCSHHHHHH-HHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSS-SEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEE
T ss_pred CCcccHHHHH-HHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCC-CCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEe
Confidence 3444444433 3444566888999999999999999999998763 589999999999999999999999998457 788
Q ss_pred CccccccccCCCCcCEEEEcCCCCC
Q 012998 392 ADLRTFADNSTVKCDKVLLDAPCSG 416 (451)
Q Consensus 392 ~Da~~~~~~~~~~fD~VlvD~PCSg 416 (451)
+|+....+...+.||+|+++.+...
T Consensus 82 ~d~~~~~~~~~~~~D~i~~~~~~~~ 106 (178)
T 3hm2_A 82 QGAPRAFDDVPDNPDVIFIGGGLTA 106 (178)
T ss_dssp CCTTGGGGGCCSCCSEEEECC-TTC
T ss_pred cchHhhhhccCCCCCEEEECCcccH
Confidence 8885533322378999998776543
No 73
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.11 E-value=3.2e-10 Score=107.83 Aligned_cols=93 Identities=24% Similarity=0.343 Sum_probs=79.5
Q ss_pred hhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc-CCCceEEEEcCccccccc
Q 012998 321 SAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH-QVNSVIRTIHADLRTFAD 399 (451)
Q Consensus 321 as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~-g~~~~I~~~~~Da~~~~~ 399 (451)
....+...+++.++.+|||+|||+|..+..++..+++.++|+++|+++.+++.++++++.. |.. ++.++++|+.+.+
T Consensus 84 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~-~v~~~~~d~~~~~- 161 (258)
T 2pwy_A 84 DASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVE-NVRFHLGKLEEAE- 161 (258)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCC-CEEEEESCGGGCC-
T ss_pred HHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCC-CEEEEECchhhcC-
Confidence 3445667788899999999999999999999998776789999999999999999999998 855 4899999998762
Q ss_pred cCCCCcCEEEEcCCCC
Q 012998 400 NSTVKCDKVLLDAPCS 415 (451)
Q Consensus 400 ~~~~~fD~VlvD~PCS 415 (451)
...+.||+|++|+|+.
T Consensus 162 ~~~~~~D~v~~~~~~~ 177 (258)
T 2pwy_A 162 LEEAAYDGVALDLMEP 177 (258)
T ss_dssp CCTTCEEEEEEESSCG
T ss_pred CCCCCcCEEEECCcCH
Confidence 2346899999998864
No 74
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.11 E-value=4.1e-10 Score=105.62 Aligned_cols=97 Identities=11% Similarity=0.152 Sum_probs=77.0
Q ss_pred ecchhhhhhhhh--CCCCCCeEEeecCCCchHHHHHHHHcCC-----CceEEEEeCCHHHHHHHHHHHHHcC-----CCc
Q 012998 318 QDESAGLVVAVV--DPQPGQSIVDCCAAPGGKTLYMASCLSG-----QGLVYAIDINKGRLRILNETAKLHQ-----VNS 385 (451)
Q Consensus 318 Qd~as~l~~~~l--~~~~g~~VLDlcagpG~kT~~la~~~~~-----~g~V~AvDi~~~rl~~l~~~~~~~g-----~~~ 385 (451)
|......+...+ .+.++.+|||+|||+|..+..+++.++. .++|+++|+++.+++.+++++...| ..+
T Consensus 67 ~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 146 (227)
T 1r18_A 67 APHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQ 146 (227)
T ss_dssp CHHHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred ChHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCc
Confidence 433334445555 4788999999999999999999997653 3699999999999999999999877 554
Q ss_pred eEEEEcCccccccccCCCCcCEEEEcCCCCC
Q 012998 386 VIRTIHADLRTFADNSTVKCDKVLLDAPCSG 416 (451)
Q Consensus 386 ~I~~~~~Da~~~~~~~~~~fD~VlvD~PCSg 416 (451)
++++.+|+..... ..++||+|+++.++..
T Consensus 147 -v~~~~~d~~~~~~-~~~~fD~I~~~~~~~~ 175 (227)
T 1r18_A 147 -LLIVEGDGRKGYP-PNAPYNAIHVGAAAPD 175 (227)
T ss_dssp -EEEEESCGGGCCG-GGCSEEEEEECSCBSS
T ss_pred -eEEEECCcccCCC-cCCCccEEEECCchHH
Confidence 8999999987321 1368999999988754
No 75
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.11 E-value=3.6e-11 Score=116.05 Aligned_cols=92 Identities=17% Similarity=0.124 Sum_probs=75.6
Q ss_pred hhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCH-------HHHHHHHHHHHHcCCCceEEEEcCcc
Q 012998 322 AGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINK-------GRLRILNETAKLHQVNSVIRTIHADL 394 (451)
Q Consensus 322 s~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~-------~rl~~l~~~~~~~g~~~~I~~~~~Da 394 (451)
..++..++.+.++.+|||+|||+|..|+.+|.. .++|+++|+++ .+++.+++|++.+|+.++|+++++|+
T Consensus 72 ~~~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~ 148 (258)
T 2r6z_A 72 GELIAKAVNHTAHPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNA 148 (258)
T ss_dssp -CHHHHHTTGGGCCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCH
T ss_pred hHHHHHHhCcCCcCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCH
Confidence 445566667677899999999999999999985 47899999999 99999999999988876799999999
Q ss_pred ccccccC-C--CCcCEEEEcCCCCC
Q 012998 395 RTFADNS-T--VKCDKVLLDAPCSG 416 (451)
Q Consensus 395 ~~~~~~~-~--~~fD~VlvD~PCSg 416 (451)
.++.... + ++||+|++|||...
T Consensus 149 ~~~l~~~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 149 AEQMPALVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHHHHHHHHHHCCCSEEEECCCC--
T ss_pred HHHHHhhhccCCCccEEEECCCCCC
Confidence 8864322 2 58999999998754
No 76
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.10 E-value=1.9e-10 Score=103.72 Aligned_cols=82 Identities=21% Similarity=0.284 Sum_probs=70.1
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---CCCCcCE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---STVKCDK 407 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---~~~~fD~ 407 (451)
..++.+|||+|||+|..+..++.. +..+|+++|+++.+++.++++++..++.++++++++|+.+.... ..++||+
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~ 119 (187)
T 2fhp_A 42 YFDGGMALDLYSGSGGLAIEAVSR--GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDL 119 (187)
T ss_dssp CCSSCEEEETTCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred hcCCCCEEEeCCccCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCE
Confidence 357889999999999999988874 34799999999999999999999999866699999999875421 1468999
Q ss_pred EEEcCCC
Q 012998 408 VLLDAPC 414 (451)
Q Consensus 408 VlvD~PC 414 (451)
|++|+|.
T Consensus 120 i~~~~~~ 126 (187)
T 2fhp_A 120 VLLDPPY 126 (187)
T ss_dssp EEECCCG
T ss_pred EEECCCC
Confidence 9999994
No 77
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.10 E-value=6.8e-11 Score=111.82 Aligned_cols=98 Identities=16% Similarity=0.133 Sum_probs=80.0
Q ss_pred eecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccc
Q 012998 317 VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT 396 (451)
Q Consensus 317 vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~ 396 (451)
++.....++..++...++.+|||+|||+|..|..++..+++.++|+++|+++.+++.+++++++.|+.++|+++.+|+.+
T Consensus 56 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~ 135 (232)
T 3cbg_A 56 ISPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALA 135 (232)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 34444555555555567889999999999999999998876689999999999999999999999998779999999866
Q ss_pred ccccC---C--CCcCEEEEcCCC
Q 012998 397 FADNS---T--VKCDKVLLDAPC 414 (451)
Q Consensus 397 ~~~~~---~--~~fD~VlvD~PC 414 (451)
..... . ++||+|++|+++
T Consensus 136 ~l~~l~~~~~~~~fD~V~~d~~~ 158 (232)
T 3cbg_A 136 TLEQLTQGKPLPEFDLIFIDADK 158 (232)
T ss_dssp HHHHHHTSSSCCCEEEEEECSCG
T ss_pred HHHHHHhcCCCCCcCEEEECCCH
Confidence 42211 2 689999999875
No 78
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.09 E-value=3.9e-10 Score=100.85 Aligned_cols=90 Identities=17% Similarity=0.328 Sum_probs=75.9
Q ss_pred ecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccc
Q 012998 318 QDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF 397 (451)
Q Consensus 318 Qd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~ 397 (451)
++.-...+...+.+.++.+|||+|||+|..+..++. +...|+++|+++.+++.++++++..|+.+ ++++++|+.+.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-~~~~~~d~~~~ 95 (183)
T 2yxd_A 20 KEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFNIKN-CQIIKGRAEDV 95 (183)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTTCCS-EEEEESCHHHH
T ss_pred HHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEECCcccc
Confidence 334445556667788899999999999999999987 45899999999999999999999999865 89999999873
Q ss_pred cccCCCCcCEEEEcCC
Q 012998 398 ADNSTVKCDKVLLDAP 413 (451)
Q Consensus 398 ~~~~~~~fD~VlvD~P 413 (451)
. ..+.||+|+++.+
T Consensus 96 ~--~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 96 L--DKLEFNKAFIGGT 109 (183)
T ss_dssp G--GGCCCSEEEECSC
T ss_pred c--cCCCCcEEEECCc
Confidence 2 2368999999988
No 79
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.09 E-value=4.1e-10 Score=108.70 Aligned_cols=97 Identities=18% Similarity=0.185 Sum_probs=80.7
Q ss_pred eecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc-C-CCceEEEEcCcc
Q 012998 317 VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH-Q-VNSVIRTIHADL 394 (451)
Q Consensus 317 vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~-g-~~~~I~~~~~Da 394 (451)
++......+...+++.++.+|||+|||+|..+..++..+++.++|+++|+++.+++.++++++.. | +.+++.++++|+
T Consensus 83 ~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~ 162 (280)
T 1i9g_A 83 IYPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDL 162 (280)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCG
T ss_pred ecHHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECch
Confidence 34444556667788899999999999999999999998776789999999999999999999988 6 333489999999
Q ss_pred ccccccCCCCcCEEEEcCCC
Q 012998 395 RTFADNSTVKCDKVLLDAPC 414 (451)
Q Consensus 395 ~~~~~~~~~~fD~VlvD~PC 414 (451)
...+ ...+.||+|++|+|.
T Consensus 163 ~~~~-~~~~~~D~v~~~~~~ 181 (280)
T 1i9g_A 163 ADSE-LPDGSVDRAVLDMLA 181 (280)
T ss_dssp GGCC-CCTTCEEEEEEESSC
T ss_pred HhcC-CCCCceeEEEECCcC
Confidence 8764 224689999999873
No 80
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.08 E-value=2.8e-10 Score=113.45 Aligned_cols=104 Identities=18% Similarity=0.377 Sum_probs=80.1
Q ss_pred CceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcC----------
Q 012998 313 GLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQ---------- 382 (451)
Q Consensus 313 G~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g---------- 382 (451)
|.-..+......+...+++.+|.+|||+|||+|..+..++..+++.++|+++|+++.+++.++++++.+|
T Consensus 85 ~~~~~~~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~ 164 (336)
T 2b25_A 85 GTAITFPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEE 164 (336)
T ss_dssp SSCCCCHHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSC
T ss_pred CCcccCHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccc
Confidence 3333444445566677889999999999999999999999987767899999999999999999999754
Q ss_pred CCceEEEEcCccccccc-cCCCCcCEEEEcCCCCC
Q 012998 383 VNSVIRTIHADLRTFAD-NSTVKCDKVLLDAPCSG 416 (451)
Q Consensus 383 ~~~~I~~~~~Da~~~~~-~~~~~fD~VlvD~PCSg 416 (451)
..++++++++|+.+... ...+.||+|++|+|+..
T Consensus 165 ~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~~~~ 199 (336)
T 2b25_A 165 WPDNVDFIHKDISGATEDIKSLTFDAVALDMLNPH 199 (336)
T ss_dssp CCCCEEEEESCTTCCC-------EEEEEECSSSTT
T ss_pred cCCceEEEECChHHcccccCCCCeeEEEECCCCHH
Confidence 22358999999987642 22457999999988653
No 81
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.07 E-value=3.6e-10 Score=108.29 Aligned_cols=81 Identities=10% Similarity=0.095 Sum_probs=70.8
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc--CCCCcCE
Q 012998 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN--STVKCDK 407 (451)
Q Consensus 330 ~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~--~~~~fD~ 407 (451)
...++.+|||+|||+|..++.+|...+ .++|+++|+++.+++.+++|++++|+.| |+++++|+.++... ..++||+
T Consensus 77 ~~~~~~~vLDiG~G~G~~~i~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~l~~-v~~~~~d~~~~~~~~~~~~~fD~ 154 (249)
T 3g89_A 77 LWQGPLRVLDLGTGAGFPGLPLKIVRP-ELELVLVDATRKKVAFVERAIEVLGLKG-ARALWGRAEVLAREAGHREAYAR 154 (249)
T ss_dssp CCCSSCEEEEETCTTTTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCSS-EEEEECCHHHHTTSTTTTTCEEE
T ss_pred ccCCCCEEEEEcCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCCc-eEEEECcHHHhhcccccCCCceE
Confidence 346788999999999999999998764 5899999999999999999999999987 99999999887642 2478999
Q ss_pred EEEcC
Q 012998 408 VLLDA 412 (451)
Q Consensus 408 VlvD~ 412 (451)
|++.+
T Consensus 155 I~s~a 159 (249)
T 3g89_A 155 AVARA 159 (249)
T ss_dssp EEEES
T ss_pred EEECC
Confidence 99864
No 82
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.07 E-value=3.3e-10 Score=109.42 Aligned_cols=89 Identities=19% Similarity=0.208 Sum_probs=72.9
Q ss_pred ecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccc
Q 012998 318 QDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT 396 (451)
Q Consensus 318 Qd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~ 396 (451)
++....++... ++||.+|||+|||+|..+..+++.... +.+|+|+|+|+.|++.++++++..+...+|+++++|+.+
T Consensus 57 ~~~i~~l~~~~--~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~ 134 (261)
T 4gek_A 57 ISMIGMLAERF--VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRD 134 (261)
T ss_dssp HHHHHHHHHHH--CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTT
T ss_pred HHHHHHHHHHh--CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccc
Confidence 33333344433 468999999999999999999998754 458999999999999999999999988789999999988
Q ss_pred ccccCCCCcCEEEEc
Q 012998 397 FADNSTVKCDKVLLD 411 (451)
Q Consensus 397 ~~~~~~~~fD~VlvD 411 (451)
++. +.||+|++.
T Consensus 135 ~~~---~~~d~v~~~ 146 (261)
T 4gek_A 135 IAI---ENASMVVLN 146 (261)
T ss_dssp CCC---CSEEEEEEE
T ss_pred ccc---cccccceee
Confidence 753 569999863
No 83
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.07 E-value=3.9e-10 Score=114.91 Aligned_cols=105 Identities=19% Similarity=0.240 Sum_probs=83.4
Q ss_pred hhhhcCceeeecch------hhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCC------------------------
Q 012998 308 GLLKEGLCAVQDES------AGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSG------------------------ 357 (451)
Q Consensus 308 ~~~~~G~~~vQd~a------s~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~------------------------ 357 (451)
.+++.|+...|..+ +..++.+....++..|||.|||+|++++.+|....+
T Consensus 164 ~l~krgyr~~~~~Apl~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~ 243 (385)
T 3ldu_A 164 ALHKRGYREKANKAPIRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWD 243 (385)
T ss_dssp CTTCCSCCCC--CCCCCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHH
T ss_pred hhhhcccccCCCCCCCcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHH
Confidence 55677776666433 222334556778999999999999999999876432
Q ss_pred -------------CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEEcCCC
Q 012998 358 -------------QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPC 414 (451)
Q Consensus 358 -------------~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD~PC 414 (451)
...|+|+|+++.+++.+++|++..|+.+.|++.++|+.++.. ...||+|++|||.
T Consensus 244 ~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~--~~~~D~Iv~NPPy 311 (385)
T 3ldu_A 244 VRKDAFNKIDNESKFKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKS--EDEFGFIITNPPY 311 (385)
T ss_dssp HHHHHHHHSCCSCCCCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCC--SCBSCEEEECCCC
T ss_pred HHHHHHHHhhccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCc--CCCCcEEEECCCC
Confidence 157999999999999999999999998779999999998763 3589999999996
No 84
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.07 E-value=5e-10 Score=104.50 Aligned_cols=80 Identities=19% Similarity=0.231 Sum_probs=65.5
Q ss_pred hCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc--cCCCCcC
Q 012998 329 VDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD--NSTVKCD 406 (451)
Q Consensus 329 l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~--~~~~~fD 406 (451)
+.+++|++|||+|||+|..+.+++...+ .++|+|+|+|+.+++.+.+.++.. .| +.++.+|+..... ...++||
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~--~~-v~~~~~d~~~~~~~~~~~~~fD 128 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER--NN-IIPLLFDASKPWKYSGIVEKVD 128 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC--SS-EEEECSCTTCGGGTTTTCCCEE
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC--CC-eEEEEcCCCCchhhccccccee
Confidence 4567899999999999999999999876 689999999999998887777654 34 7888999877421 1237899
Q ss_pred EEEEcC
Q 012998 407 KVLLDA 412 (451)
Q Consensus 407 ~VlvD~ 412 (451)
.|++|.
T Consensus 129 ~V~~~~ 134 (210)
T 1nt2_A 129 LIYQDI 134 (210)
T ss_dssp EEEECC
T ss_pred EEEEec
Confidence 999984
No 85
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.07 E-value=5.5e-10 Score=113.73 Aligned_cols=106 Identities=16% Similarity=0.202 Sum_probs=83.2
Q ss_pred hhhhcCceeeecch------hhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCC------------------------
Q 012998 308 GLLKEGLCAVQDES------AGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSG------------------------ 357 (451)
Q Consensus 308 ~~~~~G~~~vQd~a------s~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~------------------------ 357 (451)
.+++.|+-..|..+ +..++.+....++..|||.|||+|++.+.+|....+
T Consensus 163 ~LhkRgyr~~~~~Apl~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~ 242 (384)
T 3ldg_A 163 SLFKRGYRTEKGGAPIKENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTR 242 (384)
T ss_dssp CTTCCSCCCC---CCCCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHH
T ss_pred cccccCcccCCCCCCCcHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHH
Confidence 45666665544333 223344556788999999999999999988876543
Q ss_pred -------------CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEEcCCCC
Q 012998 358 -------------QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCS 415 (451)
Q Consensus 358 -------------~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD~PCS 415 (451)
...|+|+|+++.+++.+++|++..|+.+.|++.++|+.+++. ...||+|++|||..
T Consensus 243 ~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~--~~~fD~Iv~NPPYG 311 (384)
T 3ldg_A 243 VRNEADEQADYDIQLDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKT--NKINGVLISNPPYG 311 (384)
T ss_dssp HHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCC--CCCSCEEEECCCCT
T ss_pred HHHHHHHhhhccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCc--cCCcCEEEECCchh
Confidence 146999999999999999999999998889999999998764 35899999999973
No 86
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.07 E-value=5.3e-10 Score=100.84 Aligned_cols=91 Identities=22% Similarity=0.317 Sum_probs=78.2
Q ss_pred chhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc-eEEEEcCcccccc
Q 012998 320 ESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS-VIRTIHADLRTFA 398 (451)
Q Consensus 320 ~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~-~I~~~~~Da~~~~ 398 (451)
..+..+...+...++.+|||+|||+|..+..++.. .+.|+++|+++.+++.+++++...++.+ +++++++|+....
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~ 115 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV 115 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccc
Confidence 45666777778888999999999999999999876 5799999999999999999999999875 5899999987743
Q ss_pred ccCCCCcCEEEEcCCCC
Q 012998 399 DNSTVKCDKVLLDAPCS 415 (451)
Q Consensus 399 ~~~~~~fD~VlvD~PCS 415 (451)
. .++||+|++++|..
T Consensus 116 ~--~~~~D~v~~~~~~~ 130 (194)
T 1dus_A 116 K--DRKYNKIITNPPIR 130 (194)
T ss_dssp T--TSCEEEEEECCCST
T ss_pred c--cCCceEEEECCCcc
Confidence 2 46899999998854
No 87
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.06 E-value=2e-10 Score=108.79 Aligned_cols=97 Identities=15% Similarity=0.149 Sum_probs=80.2
Q ss_pred eecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccc
Q 012998 317 VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT 396 (451)
Q Consensus 317 vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~ 396 (451)
++.....++..++...++.+|||+|||+|..+..++..+++.++|+++|+++.+++.++++++..|+.+++.++.+|+..
T Consensus 44 ~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 123 (239)
T 2hnk_A 44 ISPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALE 123 (239)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHH
Confidence 44445556666666678899999999999999999999876689999999999999999999999998779999999876
Q ss_pred ccccC---------------C-CCcCEEEEcCC
Q 012998 397 FADNS---------------T-VKCDKVLLDAP 413 (451)
Q Consensus 397 ~~~~~---------------~-~~fD~VlvD~P 413 (451)
..+.. . ++||+|++|..
T Consensus 124 ~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~ 156 (239)
T 2hnk_A 124 TLQVLIDSKSAPSWASDFAFGPSSIDLFFLDAD 156 (239)
T ss_dssp HHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSC
T ss_pred HHHHHHhhcccccccccccCCCCCcCEEEEeCC
Confidence 42211 1 68999999964
No 88
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.06 E-value=7.1e-10 Score=104.62 Aligned_cols=102 Identities=13% Similarity=0.200 Sum_probs=82.4
Q ss_pred hcCceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEE
Q 012998 311 KEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTI 390 (451)
Q Consensus 311 ~~G~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~ 390 (451)
..|....+......+...+.+.++.+|||+|||+|..+..++...+ ++|+++|+++.+++.++++++..|+.+ ++++
T Consensus 69 ~~~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~~ 145 (235)
T 1jg1_A 69 PAGQTVSAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKN-VHVI 145 (235)
T ss_dssp STTCEECCHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCS-EEEE
T ss_pred CCCceeccHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCC-cEEE
Confidence 4455555655566667778888999999999999999999999864 789999999999999999999999987 8999
Q ss_pred cCccccccccCCCCcCEEEEcCCCCC
Q 012998 391 HADLRTFADNSTVKCDKVLLDAPCSG 416 (451)
Q Consensus 391 ~~Da~~~~~~~~~~fD~VlvD~PCSg 416 (451)
.+|+..... ....||+|+++.++..
T Consensus 146 ~~d~~~~~~-~~~~fD~Ii~~~~~~~ 170 (235)
T 1jg1_A 146 LGDGSKGFP-PKAPYDVIIVTAGAPK 170 (235)
T ss_dssp ESCGGGCCG-GGCCEEEEEECSBBSS
T ss_pred ECCcccCCC-CCCCccEEEECCcHHH
Confidence 999732211 1246999999877643
No 89
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.05 E-value=8.5e-10 Score=102.14 Aligned_cols=100 Identities=15% Similarity=0.155 Sum_probs=80.7
Q ss_pred ceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCc
Q 012998 314 LCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHAD 393 (451)
Q Consensus 314 ~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~D 393 (451)
....+......+...+.+.++.+|||+|||+|..+..++...++.++|+++|+++.+++.+++++...|+.+ +.++.+|
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~~~~d 136 (215)
T 2yxe_A 58 QTISAIHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDN-VIVIVGD 136 (215)
T ss_dssp EEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTT-EEEEESC
T ss_pred cEeCcHHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEECC
Confidence 333343344455666788899999999999999999999987555899999999999999999999999987 8999999
Q ss_pred cccccccCCCCcCEEEEcCCCC
Q 012998 394 LRTFADNSTVKCDKVLLDAPCS 415 (451)
Q Consensus 394 a~~~~~~~~~~fD~VlvD~PCS 415 (451)
+..... ..++||+|+++.++.
T Consensus 137 ~~~~~~-~~~~fD~v~~~~~~~ 157 (215)
T 2yxe_A 137 GTLGYE-PLAPYDRIYTTAAGP 157 (215)
T ss_dssp GGGCCG-GGCCEEEEEESSBBS
T ss_pred cccCCC-CCCCeeEEEECCchH
Confidence 854332 246899999987654
No 90
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.05 E-value=1.6e-10 Score=118.19 Aligned_cols=81 Identities=15% Similarity=0.132 Sum_probs=69.0
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc--CCCceEEEEcCcccccccc-CCCCcCEEE
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--QVNSVIRTIHADLRTFADN-STVKCDKVL 409 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~--g~~~~I~~~~~Da~~~~~~-~~~~fD~Vl 409 (451)
+|.+|||+|||+|..++.++.. .++|+++|+|+.+++.+++|++.+ |+. +++++++|+..+... ..++||+|+
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~-~i~~i~~Da~~~L~~~~~~~fDvV~ 168 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEGK-DVNILTGDFKEYLPLIKTFHPDYIY 168 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTTC-EEEEEESCGGGSHHHHHHHCCSEEE
T ss_pred CCCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCCC-cEEEEECcHHHhhhhccCCCceEEE
Confidence 4899999999999999998875 479999999999999999999999 885 599999999875322 124799999
Q ss_pred EcCCCCCc
Q 012998 410 LDAPCSGL 417 (451)
Q Consensus 410 vD~PCSg~ 417 (451)
+|||..+.
T Consensus 169 lDPPrr~~ 176 (410)
T 3ll7_A 169 VDPARRSG 176 (410)
T ss_dssp ECCEEC--
T ss_pred ECCCCcCC
Confidence 99999874
No 91
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.05 E-value=3.6e-10 Score=113.03 Aligned_cols=80 Identities=26% Similarity=0.396 Sum_probs=71.4
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEEc
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 411 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD 411 (451)
.+|.+|||+|||+|+.++. +. +.++|+|+|+|+.+++.+++|++.+|+.++++++++|+..+. +.||+|++|
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~---~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~----~~fD~Vi~d 265 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK---NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD----VKGNRVIMN 265 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT---TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC----CCEEEEEEC
T ss_pred CCCCEEEEccCccCHHHHh-cc---CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc----CCCcEEEEC
Confidence 5789999999999999998 76 367999999999999999999999999656999999998875 679999999
Q ss_pred CCCCCccc
Q 012998 412 APCSGLGV 419 (451)
Q Consensus 412 ~PCSg~G~ 419 (451)
||..+...
T Consensus 266 pP~~~~~~ 273 (336)
T 2yx1_A 266 LPKFAHKF 273 (336)
T ss_dssp CTTTGGGG
T ss_pred CcHhHHHH
Confidence 99887644
No 92
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.05 E-value=4.6e-10 Score=106.38 Aligned_cols=82 Identities=22% Similarity=0.223 Sum_probs=70.2
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc--CCCCcCE
Q 012998 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN--STVKCDK 407 (451)
Q Consensus 330 ~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~--~~~~fD~ 407 (451)
.+.++.+|||+|||+|..+..++... +.++|+++|+++.+++.+++++++.|+.+ |+++++|+.+++.. ..++||+
T Consensus 67 ~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~~~~fD~ 144 (240)
T 1xdz_A 67 DFNQVNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEALQLEN-TTFCHDRAETFGQRKDVRESYDI 144 (240)
T ss_dssp CGGGCCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSS-EEEEESCHHHHTTCTTTTTCEEE
T ss_pred ccCCCCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCC-EEEEeccHHHhcccccccCCccE
Confidence 44568899999999999999999864 45799999999999999999999999986 99999999887521 2468999
Q ss_pred EEEcCC
Q 012998 408 VLLDAP 413 (451)
Q Consensus 408 VlvD~P 413 (451)
|++++.
T Consensus 145 V~~~~~ 150 (240)
T 1xdz_A 145 VTARAV 150 (240)
T ss_dssp EEEECC
T ss_pred EEEecc
Confidence 998773
No 93
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.05 E-value=5.6e-10 Score=113.37 Aligned_cols=96 Identities=14% Similarity=0.048 Sum_probs=80.2
Q ss_pred ecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc--eEEEEcCccc
Q 012998 318 QDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS--VIRTIHADLR 395 (451)
Q Consensus 318 Qd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~--~I~~~~~Da~ 395 (451)
.|..+.++...+...++.+|||+|||+|..++.++... +..+|+++|+++.+++.+++|++.+|+.+ .+.++.+|+.
T Consensus 207 ~d~~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~ 285 (375)
T 4dcm_A 207 LDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 285 (375)
T ss_dssp CCHHHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTT
T ss_pred ccHHHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhh
Confidence 35566677788888888999999999999999999974 35799999999999999999999999763 3788999987
Q ss_pred cccccCCCCcCEEEEcCCCCC
Q 012998 396 TFADNSTVKCDKVLLDAPCSG 416 (451)
Q Consensus 396 ~~~~~~~~~fD~VlvD~PCSg 416 (451)
... ..++||.|++|||...
T Consensus 286 ~~~--~~~~fD~Ii~nppfh~ 304 (375)
T 4dcm_A 286 SGV--EPFRFNAVLCNPPFHQ 304 (375)
T ss_dssp TTC--CTTCEEEEEECCCC--
T ss_pred ccC--CCCCeeEEEECCCccc
Confidence 742 3468999999999753
No 94
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.04 E-value=5.4e-10 Score=114.19 Aligned_cols=105 Identities=18% Similarity=0.193 Sum_probs=83.1
Q ss_pred hhhhcCceeeecch------hhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCC------------------------
Q 012998 308 GLLKEGLCAVQDES------AGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSG------------------------ 357 (451)
Q Consensus 308 ~~~~~G~~~vQd~a------s~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~------------------------ 357 (451)
.+++.|+-..|..+ +..++.+....++..|||.|||+|+.++.+|....+
T Consensus 170 ~L~krgyr~~~~~Apl~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~ 249 (393)
T 3k0b_A 170 GLHKRGYRLAQGSAPIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWAD 249 (393)
T ss_dssp CTTCCSTTTTSCSCSCCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHH
T ss_pred cccccccccCCCCCCCcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHH
Confidence 34555554333222 333445567788999999999999999988876543
Q ss_pred -------------CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEEcCCC
Q 012998 358 -------------QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPC 414 (451)
Q Consensus 358 -------------~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD~PC 414 (451)
...|+|+|+++.+++.+++|++..|+.+.|+++++|+.+++. ...||+|++|||.
T Consensus 250 ~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~--~~~fD~Iv~NPPY 317 (393)
T 3k0b_A 250 ARQEAEDLANYDQPLNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT--EDEYGVVVANPPY 317 (393)
T ss_dssp HHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCC--CCCSCEEEECCCC
T ss_pred HHHHHHHhhcccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCC--CCCCCEEEECCCC
Confidence 146999999999999999999999998779999999998763 3589999999997
No 95
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.04 E-value=7.8e-10 Score=104.99 Aligned_cols=83 Identities=20% Similarity=0.165 Sum_probs=73.0
Q ss_pred hhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCC
Q 012998 324 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 403 (451)
Q Consensus 324 l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~ 403 (451)
.+...+.+.++.+|||+|||+|..+..++... ...|+++|+++.+++.++++++..|+.+++.++++|+..++. ++
T Consensus 27 ~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~ 102 (256)
T 1nkv_A 27 TLGRVLRMKPGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA--NE 102 (256)
T ss_dssp HHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC--SS
T ss_pred HHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc--CC
Confidence 44556678899999999999999999999876 368999999999999999999999997669999999988753 57
Q ss_pred CcCEEEE
Q 012998 404 KCDKVLL 410 (451)
Q Consensus 404 ~fD~Vlv 410 (451)
+||+|++
T Consensus 103 ~fD~V~~ 109 (256)
T 1nkv_A 103 KCDVAAC 109 (256)
T ss_dssp CEEEEEE
T ss_pred CCCEEEE
Confidence 8999997
No 96
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.04 E-value=9.6e-10 Score=102.13 Aligned_cols=81 Identities=19% Similarity=0.109 Sum_probs=70.7
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc-CCCCcCEEEE
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN-STVKCDKVLL 410 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~-~~~~fD~Vlv 410 (451)
.++.+|||+|||+|..+..++...+ .+.|+|+|+++.+++.++++++..|+.+ +.++++|+..++.. ..++||.|++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~~~~D~i~~ 117 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGVPN-IKLLWVDGSDLTDYFEDGEIDRLYL 117 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCCSS-EEEEECCSSCGGGTSCTTCCSEEEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCCCC-EEEEeCCHHHHHhhcCCCCCCEEEE
Confidence 4688999999999999999999864 5799999999999999999999999965 99999999886532 2568999999
Q ss_pred cCCC
Q 012998 411 DAPC 414 (451)
Q Consensus 411 D~PC 414 (451)
+.|.
T Consensus 118 ~~~~ 121 (214)
T 1yzh_A 118 NFSD 121 (214)
T ss_dssp ESCC
T ss_pred ECCC
Confidence 9874
No 97
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.04 E-value=6.5e-10 Score=108.64 Aligned_cols=97 Identities=11% Similarity=0.090 Sum_probs=81.2
Q ss_pred eeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcc
Q 012998 315 CAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL 394 (451)
Q Consensus 315 ~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da 394 (451)
|..+......++..+++.++++|||+|||+|..|..+++. .++|+|+|+++.+++.+++++...|..++++++++|+
T Consensus 10 fl~d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~ 86 (285)
T 1zq9_A 10 ILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK---AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDV 86 (285)
T ss_dssp EECCHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH---SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCT
T ss_pred ccCCHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh---CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcce
Confidence 3344445556677788889999999999999999999987 3699999999999999999998888744599999999
Q ss_pred ccccccCCCCcCEEEEcCCCCCc
Q 012998 395 RTFADNSTVKCDKVLLDAPCSGL 417 (451)
Q Consensus 395 ~~~~~~~~~~fD~VlvD~PCSg~ 417 (451)
..++. ..||.|++++|+..+
T Consensus 87 ~~~~~---~~fD~vv~nlpy~~~ 106 (285)
T 1zq9_A 87 LKTDL---PFFDTCVANLPYQIS 106 (285)
T ss_dssp TTSCC---CCCSEEEEECCGGGH
T ss_pred ecccc---hhhcEEEEecCcccc
Confidence 87642 379999999998775
No 98
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.03 E-value=6.4e-10 Score=105.14 Aligned_cols=91 Identities=14% Similarity=0.191 Sum_probs=79.7
Q ss_pred eecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccc
Q 012998 317 VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT 396 (451)
Q Consensus 317 vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~ 396 (451)
-|++++..++..+++.++.+|||+|||+|..+..++.. .+.|+++|+++.+++.+++++...|+.+ +.++.+|+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~ 80 (239)
T 1xxl_A 5 HHHHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPY---VQECIGVDATKEMVEVASSFAQEKGVEN-VRFQQGTAES 80 (239)
T ss_dssp -CHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHHTCCS-EEEEECBTTB
T ss_pred ccCCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCC-eEEEeccccc
Confidence 37788889999999999999999999999999999876 2599999999999999999999999886 8999999988
Q ss_pred ccccCCCCcCEEEEcC
Q 012998 397 FADNSTVKCDKVLLDA 412 (451)
Q Consensus 397 ~~~~~~~~fD~VlvD~ 412 (451)
++ ..+++||+|++.-
T Consensus 81 ~~-~~~~~fD~v~~~~ 95 (239)
T 1xxl_A 81 LP-FPDDSFDIITCRY 95 (239)
T ss_dssp CC-SCTTCEEEEEEES
T ss_pred CC-CCCCcEEEEEECC
Confidence 65 3357899999763
No 99
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.03 E-value=6.6e-10 Score=114.68 Aligned_cols=80 Identities=23% Similarity=0.273 Sum_probs=71.5
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
+.++++|||+|||+|..++.+|.. ...|+|+|+++.+++.+++|++.+|+. ++++++|+.++.. .+||+|++
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~~~~~---~~fD~Vv~ 359 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDREVSV---KGFDTVIV 359 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTTTCCC---TTCSEEEE
T ss_pred cCCCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChHHcCc---cCCCEEEE
Confidence 567899999999999999999885 468999999999999999999999986 8999999988753 27999999
Q ss_pred cCCCCCcc
Q 012998 411 DAPCSGLG 418 (451)
Q Consensus 411 D~PCSg~G 418 (451)
|||++|..
T Consensus 360 dPPr~g~~ 367 (425)
T 2jjq_A 360 DPPRAGLH 367 (425)
T ss_dssp CCCTTCSC
T ss_pred cCCccchH
Confidence 99998764
No 100
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.02 E-value=5.6e-10 Score=105.66 Aligned_cols=78 Identities=12% Similarity=0.107 Sum_probs=67.9
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
+.+|++|||+|||+|..++.++.. ++.++|+|+|+++..++.+++|++++|+.++|+++++|+...... .+.||.|++
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~-~~~~D~Ivi 96 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQM-GYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE-ADNIDTITI 96 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHT-TCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-GGCCCEEEE
T ss_pred CCCCCEEEEECCchHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc-ccccCEEEE
Confidence 457899999999999999999886 445789999999999999999999999998899999999876532 237999886
No 101
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.02 E-value=8.2e-10 Score=105.44 Aligned_cols=99 Identities=9% Similarity=0.125 Sum_probs=76.8
Q ss_pred hhhhcCceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceE
Q 012998 308 GLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVI 387 (451)
Q Consensus 308 ~~~~~G~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I 387 (451)
..|.....+.|......+...+.+.++.+|||+|||+|..+..++... +.|+++|+++.+++.++++++..|+.+ +
T Consensus 12 ~~~~~s~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~-v 87 (260)
T 1vl5_A 12 HMYVTSQIHAKGSDLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQQ-V 87 (260)
T ss_dssp -----------CCCHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCCS-E
T ss_pred eeeecCccccCHHHHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCCc-e
Confidence 456666677777777788888888899999999999999999998763 599999999999999999999999886 8
Q ss_pred EEEcCccccccccCCCCcCEEEEc
Q 012998 388 RTIHADLRTFADNSTVKCDKVLLD 411 (451)
Q Consensus 388 ~~~~~Da~~~~~~~~~~fD~VlvD 411 (451)
.++.+|+..++ ..+++||+|++.
T Consensus 88 ~~~~~d~~~l~-~~~~~fD~V~~~ 110 (260)
T 1vl5_A 88 EYVQGDAEQMP-FTDERFHIVTCR 110 (260)
T ss_dssp EEEECCC-CCC-SCTTCEEEEEEE
T ss_pred EEEEecHHhCC-CCCCCEEEEEEh
Confidence 99999998865 335789999975
No 102
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.02 E-value=3.6e-10 Score=108.96 Aligned_cols=93 Identities=20% Similarity=0.172 Sum_probs=75.3
Q ss_pred hhhhhhhhhCCCCC--CeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcC--------CCceEEEE
Q 012998 321 SAGLVVAVVDPQPG--QSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQ--------VNSVIRTI 390 (451)
Q Consensus 321 as~l~~~~l~~~~g--~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g--------~~~~I~~~ 390 (451)
....+..++.+.+| .+|||+|||.|..++.+|.. +++|+++|+++..+..+++++++.+ +.++++++
T Consensus 74 ~~e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~ 150 (258)
T 2oyr_A 74 RGEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLI 150 (258)
T ss_dssp GGSHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEE
T ss_pred hHHHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEE
Confidence 34556677777778 99999999999999999987 4689999999999888888876542 42459999
Q ss_pred cCccccccccCCCCcCEEEEcCCCCC
Q 012998 391 HADLRTFADNSTVKCDKVLLDAPCSG 416 (451)
Q Consensus 391 ~~Da~~~~~~~~~~fD~VlvD~PCSg 416 (451)
++|+.++.......||+|++|||...
T Consensus 151 ~~D~~~~L~~~~~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 151 HASSLTALTDITPRPQVVYLDPMFPH 176 (258)
T ss_dssp ESCHHHHSTTCSSCCSEEEECCCCCC
T ss_pred ECCHHHHHHhCcccCCEEEEcCCCCC
Confidence 99998865433457999999999854
No 103
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.02 E-value=6.5e-10 Score=106.06 Aligned_cols=78 Identities=8% Similarity=0.091 Sum_probs=67.6
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
+.+|++|||+|||+|..++.++.. ++.++|+|+|+++..++.+++|++++|+.++|++..+|+...... ...||.|++
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~-~~~~D~Ivi 96 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKN-QTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEK-KDAIDTIVI 96 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-GGCCCEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCc-cccccEEEE
Confidence 457899999999999999999886 345689999999999999999999999998899999999876431 236999887
No 104
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.02 E-value=8.2e-10 Score=103.36 Aligned_cols=81 Identities=20% Similarity=0.258 Sum_probs=69.2
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc--cCCCCcCE
Q 012998 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD--NSTVKCDK 407 (451)
Q Consensus 330 ~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~--~~~~~fD~ 407 (451)
.+.++++|||+|||+|..+..++..+++.++|+++|+++.+++.++++++.. .+ ++++++|+..... ...++||+
T Consensus 70 ~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~--~~-v~~~~~d~~~~~~~~~~~~~~D~ 146 (227)
T 1g8a_A 70 PIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER--RN-IVPILGDATKPEEYRALVPKVDV 146 (227)
T ss_dssp CCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC--TT-EEEEECCTTCGGGGTTTCCCEEE
T ss_pred CCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc--CC-CEEEEccCCCcchhhcccCCceE
Confidence 3678999999999999999999998876689999999999999999999876 44 8999999987431 12458999
Q ss_pred EEEcCC
Q 012998 408 VLLDAP 413 (451)
Q Consensus 408 VlvD~P 413 (451)
|++|+|
T Consensus 147 v~~~~~ 152 (227)
T 1g8a_A 147 IFEDVA 152 (227)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 999988
No 105
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.02 E-value=1.3e-09 Score=101.69 Aligned_cols=81 Identities=14% Similarity=0.087 Sum_probs=70.1
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc-cCCCCcCEEEE
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD-NSTVKCDKVLL 410 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~-~~~~~fD~Vlv 410 (451)
.++.+|||+|||+|..+..+|... +...|+|+|+++.+++.++++++..|+.| |.++++|+..++. ...+.||.|++
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~~~n-v~~~~~d~~~l~~~~~~~~~d~v~~ 114 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSEAQN-VKLLNIDADTLTDVFEPGEVKRVYL 114 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSCCSS-EEEECCCGGGHHHHCCTTSCCEEEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcCCCC-EEEEeCCHHHHHhhcCcCCcCEEEE
Confidence 367899999999999999999885 35799999999999999999999999986 9999999988653 23568999998
Q ss_pred cCCC
Q 012998 411 DAPC 414 (451)
Q Consensus 411 D~PC 414 (451)
..|+
T Consensus 115 ~~~~ 118 (213)
T 2fca_A 115 NFSD 118 (213)
T ss_dssp ESCC
T ss_pred ECCC
Confidence 7664
No 106
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.01 E-value=1e-09 Score=103.27 Aligned_cols=83 Identities=23% Similarity=0.280 Sum_probs=70.0
Q ss_pred hhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccc--ccCCCCc
Q 012998 328 VVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA--DNSTVKC 405 (451)
Q Consensus 328 ~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~--~~~~~~f 405 (451)
.+.+.++.+|||+|||+|..+..++...++.++|+|+|+++.+++.+.++++.. .+ ++++++|+.... +...++|
T Consensus 72 ~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~--~~-v~~~~~d~~~~~~~~~~~~~~ 148 (233)
T 2ipx_A 72 QIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR--TN-IIPVIEDARHPHKYRMLIAMV 148 (233)
T ss_dssp CCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC--TT-EEEECSCTTCGGGGGGGCCCE
T ss_pred eecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc--CC-eEEEEcccCChhhhcccCCcE
Confidence 345778999999999999999999998766689999999999999888888876 34 899999998742 1235689
Q ss_pred CEEEEcCC
Q 012998 406 DKVLLDAP 413 (451)
Q Consensus 406 D~VlvD~P 413 (451)
|+|++|+|
T Consensus 149 D~V~~~~~ 156 (233)
T 2ipx_A 149 DVIFADVA 156 (233)
T ss_dssp EEEEECCC
T ss_pred EEEEEcCC
Confidence 99999988
No 107
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.01 E-value=7.7e-10 Score=104.42 Aligned_cols=78 Identities=10% Similarity=0.066 Sum_probs=66.6
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
+.+|++|||+|||+|..++.++.. ++.++|+|+|+++..++.+++|++++|+.++|+++.+|+....+. ...||.|++
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~-~~~~D~Ivi 90 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVER-GQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE-TDQVSVITI 90 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-GGCCCEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc-CcCCCEEEE
Confidence 457899999999999999999886 445799999999999999999999999998899999998653321 126999886
No 108
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.01 E-value=5.8e-10 Score=102.54 Aligned_cols=74 Identities=23% Similarity=0.331 Sum_probs=59.4
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc------CC--
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN------ST-- 402 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~------~~-- 402 (451)
+++|.+|||+|||||++|..+++. .++|+|+|+++.. .+.+ ++++++|+.+.... ..
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~-----------~~~~-v~~~~~D~~~~~~~~~~~~~~~~~ 87 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME-----------EIAG-VRFIRCDIFKETIFDDIDRALREE 87 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC-----------CCTT-CEEEECCTTSSSHHHHHHHHHHHH
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc-----------cCCC-eEEEEccccCHHHHHHHHHHhhcc
Confidence 468999999999999999999887 5899999999752 2344 88999998774310 11
Q ss_pred --CCcCEEEEcCCCCCccc
Q 012998 403 --VKCDKVLLDAPCSGLGV 419 (451)
Q Consensus 403 --~~fD~VlvD~PCSg~G~ 419 (451)
++||+|++|+++..+|.
T Consensus 88 ~~~~~D~Vlsd~~~~~~g~ 106 (191)
T 3dou_A 88 GIEKVDDVVSDAMAKVSGI 106 (191)
T ss_dssp TCSSEEEEEECCCCCCCSC
T ss_pred cCCcceEEecCCCcCCCCC
Confidence 48999999999887776
No 109
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.99 E-value=2.8e-09 Score=100.63 Aligned_cols=91 Identities=7% Similarity=0.137 Sum_probs=76.8
Q ss_pred cchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccc
Q 012998 319 DESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA 398 (451)
Q Consensus 319 d~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~ 398 (451)
......+...+++.+|++|||+|||+|..+..++.. .++|+++|+++.+++.++++++..|+..++.++.+|+.+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 153 (248)
T 2yvl_A 77 PKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE 153 (248)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC
T ss_pred chhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc
Confidence 334445666778889999999999999999999987 47999999999999999999999998556999999998753
Q ss_pred ccCCCCcCEEEEcCC
Q 012998 399 DNSTVKCDKVLLDAP 413 (451)
Q Consensus 399 ~~~~~~fD~VlvD~P 413 (451)
. ..+.||+|++|+|
T Consensus 154 ~-~~~~~D~v~~~~~ 167 (248)
T 2yvl_A 154 V-PEGIFHAAFVDVR 167 (248)
T ss_dssp C-CTTCBSEEEECSS
T ss_pred c-CCCcccEEEECCc
Confidence 1 2357999999987
No 110
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.99 E-value=1.4e-09 Score=102.02 Aligned_cols=79 Identities=13% Similarity=0.071 Sum_probs=69.1
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc--cCCCCcCEEEE
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD--NSTVKCDKVLL 410 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~--~~~~~fD~Vlv 410 (451)
++.+|||+|||+|..+..+|...+ ...|+|+|+++.+++.++++++..|+.| |.++++|+..+.+ ..+++||.|++
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p-~~~v~giD~s~~~l~~a~~~~~~~~l~n-v~~~~~Da~~~l~~~~~~~~~d~v~~ 111 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRP-EQDFLGIEVHSPGVGACLASAHEEGLSN-LRVMCHDAVEVLHKMIPDNSLRMVQL 111 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHTTCSS-EEEECSCHHHHHHHHSCTTCEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCC-CCeEEEEEecHHHHHHHHHHHHHhCCCc-EEEEECCHHHHHHHHcCCCChheEEE
Confidence 678999999999999999998754 5789999999999999999999999987 9999999988532 24678999999
Q ss_pred cCC
Q 012998 411 DAP 413 (451)
Q Consensus 411 D~P 413 (451)
.-|
T Consensus 112 ~~~ 114 (218)
T 3dxy_A 112 FFP 114 (218)
T ss_dssp ESC
T ss_pred eCC
Confidence 744
No 111
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.98 E-value=1.8e-09 Score=100.04 Aligned_cols=88 Identities=15% Similarity=0.248 Sum_probs=76.0
Q ss_pred hhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCC
Q 012998 323 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 402 (451)
Q Consensus 323 ~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~ 402 (451)
..+...+.+.++.+|||+|||+|..+..++...++.+.|+++|+++.+++.+++++...++.+ ++++.+|+..++ ...
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-~~~~~~d~~~~~-~~~ 104 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKN-VEVLKSEENKIP-LPD 104 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTT-EEEEECBTTBCS-SCS
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCc-EEEEecccccCC-CCC
Confidence 345566778889999999999999999999987666899999999999999999999999885 899999998865 335
Q ss_pred CCcCEEEEcC
Q 012998 403 VKCDKVLLDA 412 (451)
Q Consensus 403 ~~fD~VlvD~ 412 (451)
++||+|++..
T Consensus 105 ~~fD~v~~~~ 114 (219)
T 3dh0_A 105 NTVDFIFMAF 114 (219)
T ss_dssp SCEEEEEEES
T ss_pred CCeeEEEeeh
Confidence 7899999753
No 112
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.98 E-value=1.9e-09 Score=105.52 Aligned_cols=82 Identities=10% Similarity=0.077 Sum_probs=73.2
Q ss_pred hhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCC
Q 012998 324 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 403 (451)
Q Consensus 324 l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~ 403 (451)
.+...+.+++|.+|||+|||+|..+..+++..+ .+|+++|+++.+++.+++++...|+.++++++++|+..+ ++
T Consensus 63 ~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~ 136 (302)
T 3hem_A 63 LALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF----DE 136 (302)
T ss_dssp HHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC----CC
T ss_pred HHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc----CC
Confidence 355667788999999999999999999998764 789999999999999999999999987799999999876 47
Q ss_pred CcCEEEEc
Q 012998 404 KCDKVLLD 411 (451)
Q Consensus 404 ~fD~VlvD 411 (451)
+||+|++.
T Consensus 137 ~fD~v~~~ 144 (302)
T 3hem_A 137 PVDRIVSL 144 (302)
T ss_dssp CCSEEEEE
T ss_pred CccEEEEc
Confidence 89999975
No 113
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.98 E-value=1.5e-09 Score=99.88 Aligned_cols=88 Identities=17% Similarity=0.164 Sum_probs=73.6
Q ss_pred hhhhhhhhC--CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc
Q 012998 322 AGLVVAVVD--PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD 399 (451)
Q Consensus 322 s~l~~~~l~--~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~ 399 (451)
...+...+. +.++.+|||+|||+|..+..++.. +.+.|+++|+++.+++.+++++...++.+ +.++++|+....
T Consensus 47 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~- 122 (205)
T 3grz_A 47 TQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKL--GAKSVLATDISDESMTAAEENAALNGIYD-IALQKTSLLADV- 122 (205)
T ss_dssp HHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTTC-
T ss_pred HHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEeccccccC-
Confidence 334444444 567899999999999999998874 44699999999999999999999999987 899999997754
Q ss_pred cCCCCcCEEEEcCCCC
Q 012998 400 NSTVKCDKVLLDAPCS 415 (451)
Q Consensus 400 ~~~~~fD~VlvD~PCS 415 (451)
.++||+|++++|..
T Consensus 123 --~~~fD~i~~~~~~~ 136 (205)
T 3grz_A 123 --DGKFDLIVANILAE 136 (205)
T ss_dssp --CSCEEEEEEESCHH
T ss_pred --CCCceEEEECCcHH
Confidence 37899999998764
No 114
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.98 E-value=1.4e-09 Score=106.78 Aligned_cols=94 Identities=18% Similarity=0.188 Sum_probs=77.1
Q ss_pred eeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcc
Q 012998 315 CAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL 394 (451)
Q Consensus 315 ~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da 394 (451)
|.....-...++..+++.++++|||+|||+|..|..+++. .++|+|+|+++.+++.+++++. +..+ ++++++|+
T Consensus 32 fL~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~--~~~~-v~vi~gD~ 105 (295)
T 3gru_A 32 FLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKE--LYNN-IEIIWGDA 105 (295)
T ss_dssp EECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHH--HCSS-EEEEESCT
T ss_pred ccCCHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhc--cCCC-eEEEECch
Confidence 4444444556667788899999999999999999999987 4799999999999999999988 3444 89999999
Q ss_pred ccccccCCCCcCEEEEcCCCC
Q 012998 395 RTFADNSTVKCDKVLLDAPCS 415 (451)
Q Consensus 395 ~~~~~~~~~~fD~VlvD~PCS 415 (451)
..++. ....||+|+.+.|..
T Consensus 106 l~~~~-~~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 106 LKVDL-NKLDFNKVVANLPYQ 125 (295)
T ss_dssp TTSCG-GGSCCSEEEEECCGG
T ss_pred hhCCc-ccCCccEEEEeCccc
Confidence 87642 235799999999964
No 115
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.97 E-value=1.3e-09 Score=107.22 Aligned_cols=92 Identities=11% Similarity=0.186 Sum_probs=77.1
Q ss_pred eecchhhhhhhhhC-CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccc
Q 012998 317 VQDESAGLVVAVVD-PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLR 395 (451)
Q Consensus 317 vQd~as~l~~~~l~-~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~ 395 (451)
+++.....+...+. +.++.+|||+|||+|..+..+++.. .++|+++|+++.+++.++++++..|+.++++++.+|+.
T Consensus 100 ~~~~~~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 177 (312)
T 3vc1_A 100 LESAQAEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNML 177 (312)
T ss_dssp HHHHHHHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred HHHHHHHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh
Confidence 34444445566666 7889999999999999999999875 37899999999999999999999999867999999998
Q ss_pred cccccCCCCcCEEEEc
Q 012998 396 TFADNSTVKCDKVLLD 411 (451)
Q Consensus 396 ~~~~~~~~~fD~VlvD 411 (451)
.++ ...++||+|++.
T Consensus 178 ~~~-~~~~~fD~V~~~ 192 (312)
T 3vc1_A 178 DTP-FDKGAVTASWNN 192 (312)
T ss_dssp SCC-CCTTCEEEEEEE
T ss_pred cCC-CCCCCEeEEEEC
Confidence 865 335789999963
No 116
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.97 E-value=1.7e-09 Score=103.73 Aligned_cols=83 Identities=18% Similarity=0.252 Sum_probs=72.6
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
+.++.+|||+|||+|..+..++.. +.+.|+++|+++.+++.++++++..|+.++++++++|+..++ ...++||+|++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~i~~ 120 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP-FRNEELDLIWS 120 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-CCTTCEEEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC-CCCCCEEEEEE
Confidence 678999999999999999999987 456999999999999999999999999878999999998875 23578999998
Q ss_pred cCCCCC
Q 012998 411 DAPCSG 416 (451)
Q Consensus 411 D~PCSg 416 (451)
..+...
T Consensus 121 ~~~~~~ 126 (267)
T 3kkz_A 121 EGAIYN 126 (267)
T ss_dssp SSCGGG
T ss_pred cCCcee
Confidence 766443
No 117
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.97 E-value=2.1e-09 Score=100.54 Aligned_cols=97 Identities=16% Similarity=0.169 Sum_probs=78.5
Q ss_pred CceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcC
Q 012998 313 GLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA 392 (451)
Q Consensus 313 G~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~ 392 (451)
|....+......+...+.+.++.+|||+|||+|..+..++... +.|+++|+++.+++.+++++...| + +.++++
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~--~-v~~~~~ 123 (231)
T 1vbf_A 50 GINTTALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYN--N-IKLILG 123 (231)
T ss_dssp TEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCS--S-EEEEES
T ss_pred CCccCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcC--C-eEEEEC
Confidence 4444454455566677788899999999999999999999873 799999999999999999998887 3 899999
Q ss_pred ccccccccCCCCcCEEEEcCCCCC
Q 012998 393 DLRTFADNSTVKCDKVLLDAPCSG 416 (451)
Q Consensus 393 Da~~~~~~~~~~fD~VlvD~PCSg 416 (451)
|+..... ..++||+|+++.++..
T Consensus 124 d~~~~~~-~~~~fD~v~~~~~~~~ 146 (231)
T 1vbf_A 124 DGTLGYE-EEKPYDRVVVWATAPT 146 (231)
T ss_dssp CGGGCCG-GGCCEEEEEESSBBSS
T ss_pred Ccccccc-cCCCccEEEECCcHHH
Confidence 9987322 2468999999987654
No 118
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.96 E-value=8.1e-10 Score=97.94 Aligned_cols=78 Identities=15% Similarity=0.192 Sum_probs=66.6
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccC---CCCcCEEE
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS---TVKCDKVL 409 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~---~~~fD~Vl 409 (451)
++.+|||+|||+|..+..++... ..|+++|+++.+++.++++++..++ + ++++++|+.+..... .++||+|+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~-~-~~~~~~d~~~~~~~~~~~~~~~D~i~ 115 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG---WEAVLVEKDPEAVRLLKENVRRTGL-G-ARVVALPVEVFLPEAKAQGERFTVAF 115 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT---CEEEEECCCHHHHHHHHHHHHHHTC-C-CEEECSCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC---CeEEEEeCCHHHHHHHHHHHHHcCC-c-eEEEeccHHHHHHhhhccCCceEEEE
Confidence 68899999999999999998862 3499999999999999999999998 4 899999998743211 24799999
Q ss_pred EcCCCC
Q 012998 410 LDAPCS 415 (451)
Q Consensus 410 vD~PCS 415 (451)
+|+|..
T Consensus 116 ~~~~~~ 121 (171)
T 1ws6_A 116 MAPPYA 121 (171)
T ss_dssp ECCCTT
T ss_pred ECCCCc
Confidence 999976
No 119
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.96 E-value=2.3e-09 Score=101.76 Aligned_cols=82 Identities=20% Similarity=0.329 Sum_probs=72.0
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEE
Q 012998 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 409 (451)
Q Consensus 330 ~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vl 409 (451)
.+.++.+|||+|||+|..+..++...+ ++|+++|+++.+++.+++++...|+.++++++++|+..++ ...++||+|+
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~ 119 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLP-FQNEELDLIW 119 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCS-SCTTCEEEEE
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCC-CCCCCEEEEE
Confidence 567889999999999999999999853 4999999999999999999999999888999999998775 2357899999
Q ss_pred EcCCC
Q 012998 410 LDAPC 414 (451)
Q Consensus 410 vD~PC 414 (451)
+....
T Consensus 120 ~~~~l 124 (257)
T 3f4k_A 120 SEGAI 124 (257)
T ss_dssp EESCS
T ss_pred ecChH
Confidence 87543
No 120
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.96 E-value=1.8e-09 Score=101.55 Aligned_cols=83 Identities=22% Similarity=0.236 Sum_probs=68.5
Q ss_pred hCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc--cCCCCcC
Q 012998 329 VDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD--NSTVKCD 406 (451)
Q Consensus 329 l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~--~~~~~fD 406 (451)
+.+.++.+|||+|||+|..+.+++...+ .++|+|+|+++.+++.++++++.. .+ +.++.+|+..... ...+.||
T Consensus 70 ~~~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~~-v~~~~~d~~~~~~~~~~~~~~D 145 (230)
T 1fbn_A 70 MPIKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER--EN-IIPILGDANKPQEYANIVEKVD 145 (230)
T ss_dssp CCCCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC--TT-EEEEECCTTCGGGGTTTSCCEE
T ss_pred cCCCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC--CC-eEEEECCCCCcccccccCccEE
Confidence 4567899999999999999999999876 589999999999999999998766 44 8899999987211 1126899
Q ss_pred EEEEcCCCC
Q 012998 407 KVLLDAPCS 415 (451)
Q Consensus 407 ~VlvD~PCS 415 (451)
+|+.|+|..
T Consensus 146 ~v~~~~~~~ 154 (230)
T 1fbn_A 146 VIYEDVAQP 154 (230)
T ss_dssp EEEECCCST
T ss_pred EEEEecCCh
Confidence 999987654
No 121
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.94 E-value=2.6e-09 Score=96.01 Aligned_cols=93 Identities=20% Similarity=0.252 Sum_probs=76.3
Q ss_pred ecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccc
Q 012998 318 QDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF 397 (451)
Q Consensus 318 Qd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~ 397 (451)
++.....+...+.+.++.+|||+|||+|..+..++... +.|+++|+++.+++.++++++..|+..++.++++|+...
T Consensus 18 ~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 94 (192)
T 1l3i_A 18 AMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEA 94 (192)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHH
T ss_pred hHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHh
Confidence 44445556667788899999999999999999998863 799999999999999999999999844589999998773
Q ss_pred cccCCCCcCEEEEcCCC
Q 012998 398 ADNSTVKCDKVLLDAPC 414 (451)
Q Consensus 398 ~~~~~~~fD~VlvD~PC 414 (451)
... .+.||+|+++.+.
T Consensus 95 ~~~-~~~~D~v~~~~~~ 110 (192)
T 1l3i_A 95 LCK-IPDIDIAVVGGSG 110 (192)
T ss_dssp HTT-SCCEEEEEESCCT
T ss_pred ccc-CCCCCEEEECCch
Confidence 221 2579999998764
No 122
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.92 E-value=3.9e-09 Score=100.35 Aligned_cols=83 Identities=12% Similarity=0.179 Sum_probs=68.9
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc--------CCCceEEEEcCccccccc--c
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--------QVNSVIRTIHADLRTFAD--N 400 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~--------g~~~~I~~~~~Da~~~~~--~ 400 (451)
+.++.+|||+|||+|..++.++...+ .+.|+|+|+++.+++.++++++.+ |+.| +.++++|+..... .
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~n-v~~~~~D~~~~l~~~~ 124 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFP-EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQN-INVLRGNAMKFLPNFF 124 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHST-TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTT-EEEEECCTTSCGGGTS
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCC-CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCc-EEEEeccHHHHHHHhc
Confidence 34678999999999999999998753 579999999999999999999887 8876 8999999987332 2
Q ss_pred CCCCcCEEEEcCCCC
Q 012998 401 STVKCDKVLLDAPCS 415 (451)
Q Consensus 401 ~~~~fD~VlvD~PCS 415 (451)
..+.||.|++.-|..
T Consensus 125 ~~~~~d~v~~~~p~p 139 (246)
T 2vdv_E 125 EKGQLSKMFFCFPDP 139 (246)
T ss_dssp CTTCEEEEEEESCCC
T ss_pred cccccCEEEEECCCc
Confidence 256899998776653
No 123
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.92 E-value=6.8e-10 Score=105.74 Aligned_cols=88 Identities=18% Similarity=0.136 Sum_probs=69.8
Q ss_pred CCCCeEEeecCCCchHHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHHc---CCCce---------------------
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCL-SGQGLVYAIDINKGRLRILNETAKLH---QVNSV--------------------- 386 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~-~~~g~V~AvDi~~~rl~~l~~~~~~~---g~~~~--------------------- 386 (451)
.++.+|||+|||+|..+..++..+ .+...|+|+|+|+.+++.+++++... |+.++
T Consensus 50 ~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 50 DGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp CSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhh
Confidence 467899999999999999999873 23468999999999999999999877 66433
Q ss_pred ----EE-------------EEcCcccccccc----CCCCcCEEEEcCCCCCccc
Q 012998 387 ----IR-------------TIHADLRTFADN----STVKCDKVLLDAPCSGLGV 419 (451)
Q Consensus 387 ----I~-------------~~~~Da~~~~~~----~~~~fD~VlvD~PCSg~G~ 419 (451)
|+ ++++|+...... ...+||+|++|+|+.....
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~ 183 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTH 183 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSS
T ss_pred hhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeecccc
Confidence 56 889998775421 2348999999999865443
No 124
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.92 E-value=1.9e-09 Score=98.81 Aligned_cols=74 Identities=19% Similarity=0.245 Sum_probs=63.5
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEE
Q 012998 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 409 (451)
Q Consensus 330 ~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vl 409 (451)
.+.++.+|||+|||+|..+..++.. +..+|+++|+++.+++.+++++. + ++++++|+..++ ++||+|+
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~-----~-~~~~~~d~~~~~----~~~D~v~ 115 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLL--GAESVTAFDIDPDAIETAKRNCG-----G-VNFMVADVSEIS----GKYDTWI 115 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHT--TBSEEEEEESCHHHHHHHHHHCT-----T-SEEEECCGGGCC----CCEEEEE
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhcC-----C-CEEEECcHHHCC----CCeeEEE
Confidence 4567899999999999999999886 34589999999999999999986 3 678999998864 5799999
Q ss_pred EcCCCC
Q 012998 410 LDAPCS 415 (451)
Q Consensus 410 vD~PCS 415 (451)
+|+|..
T Consensus 116 ~~~p~~ 121 (200)
T 1ne2_A 116 MNPPFG 121 (200)
T ss_dssp ECCCC-
T ss_pred ECCCch
Confidence 999953
No 125
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.91 E-value=4.1e-09 Score=101.07 Aligned_cols=87 Identities=17% Similarity=0.196 Sum_probs=74.5
Q ss_pred hhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccC
Q 012998 322 AGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS 401 (451)
Q Consensus 322 s~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~ 401 (451)
...+...+.+.++.+|||+|||+|..+..++... .+.|+++|+++.+++.+++++...|+.+++.++.+|+..++ ..
T Consensus 50 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~ 126 (273)
T 3bus_A 50 TDEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP-FE 126 (273)
T ss_dssp HHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-SC
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC-CC
Confidence 3445566777899999999999999999999874 47999999999999999999999999877999999998865 23
Q ss_pred CCCcCEEEEc
Q 012998 402 TVKCDKVLLD 411 (451)
Q Consensus 402 ~~~fD~VlvD 411 (451)
+++||+|++.
T Consensus 127 ~~~fD~v~~~ 136 (273)
T 3bus_A 127 DASFDAVWAL 136 (273)
T ss_dssp TTCEEEEEEE
T ss_pred CCCccEEEEe
Confidence 5789999974
No 126
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.90 E-value=7.1e-09 Score=94.11 Aligned_cols=85 Identities=19% Similarity=0.178 Sum_probs=72.6
Q ss_pred hhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCC
Q 012998 323 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 402 (451)
Q Consensus 323 ~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~ 402 (451)
..+...+...++.+|||+|||+|..+..++.. ...|+++|+++.+++.+++++...++.+ +.++.+|+..++. .
T Consensus 22 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~-~~~~~~d~~~~~~--~ 95 (199)
T 2xvm_A 22 SEVLEAVKVVKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENLDN-LHTRVVDLNNLTF--D 95 (199)
T ss_dssp HHHHHHTTTSCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCTT-EEEEECCGGGCCC--C
T ss_pred HHHHHHhhccCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCCCC-cEEEEcchhhCCC--C
Confidence 34456667778889999999999999999886 4699999999999999999999999876 8999999988753 5
Q ss_pred CCcCEEEEcCC
Q 012998 403 VKCDKVLLDAP 413 (451)
Q Consensus 403 ~~fD~VlvD~P 413 (451)
++||+|++...
T Consensus 96 ~~~D~v~~~~~ 106 (199)
T 2xvm_A 96 RQYDFILSTVV 106 (199)
T ss_dssp CCEEEEEEESC
T ss_pred CCceEEEEcch
Confidence 78999997643
No 127
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.89 E-value=4.3e-09 Score=96.80 Aligned_cols=87 Identities=15% Similarity=0.201 Sum_probs=73.4
Q ss_pred hhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCC
Q 012998 323 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 402 (451)
Q Consensus 323 ~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~ 402 (451)
..+...+...++ +|||+|||+|..+..++.. +...|+++|+++.+++.++++++..|+.++++++++|+..++ ...
T Consensus 34 ~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~ 109 (219)
T 3dlc_A 34 ENIINRFGITAG-TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP-IED 109 (219)
T ss_dssp HHHHHHHCCCEE-EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS-SCT
T ss_pred HHHHHhcCCCCC-EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC-CCc
Confidence 344455666666 9999999999999999987 347999999999999999999999998767999999998865 335
Q ss_pred CCcCEEEEcCC
Q 012998 403 VKCDKVLLDAP 413 (451)
Q Consensus 403 ~~fD~VlvD~P 413 (451)
++||+|++...
T Consensus 110 ~~~D~v~~~~~ 120 (219)
T 3dlc_A 110 NYADLIVSRGS 120 (219)
T ss_dssp TCEEEEEEESC
T ss_pred ccccEEEECch
Confidence 78999998654
No 128
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.89 E-value=4e-09 Score=101.24 Aligned_cols=95 Identities=17% Similarity=0.173 Sum_probs=76.3
Q ss_pred ecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHH------HHHHHHHHHHHcCCCceEEEEc
Q 012998 318 QDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKG------RLRILNETAKLHQVNSVIRTIH 391 (451)
Q Consensus 318 Qd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~------rl~~l~~~~~~~g~~~~I~~~~ 391 (451)
|......+...+.+.++.+|||+|||+|..+..++...++.++|+++|+++. +++.++++++..|+.++++++.
T Consensus 28 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~ 107 (275)
T 3bkx_A 28 QTAHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHF 107 (275)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEEC
T ss_pred HHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEE
Confidence 3333445566678889999999999999999999998755689999999997 9999999999999866699999
Q ss_pred Cc-c--ccccccCCCCcCEEEEcCC
Q 012998 392 AD-L--RTFADNSTVKCDKVLLDAP 413 (451)
Q Consensus 392 ~D-a--~~~~~~~~~~fD~VlvD~P 413 (451)
+| . ..++ ...++||+|++...
T Consensus 108 ~d~~~~~~~~-~~~~~fD~v~~~~~ 131 (275)
T 3bkx_A 108 NTNLSDDLGP-IADQHFDRVVLAHS 131 (275)
T ss_dssp SCCTTTCCGG-GTTCCCSEEEEESC
T ss_pred CChhhhccCC-CCCCCEEEEEEccc
Confidence 98 3 3322 23578999998644
No 129
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.89 E-value=4e-09 Score=107.26 Aligned_cols=80 Identities=16% Similarity=0.230 Sum_probs=70.2
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEEc
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 411 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD 411 (451)
.++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++|++.+++. ++++++|+..... ..++||+|++|
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~~~--v~~~~~D~~~~~~-~~~~fD~Ii~n 305 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANALK--AQALHSDVDEALT-EEARFDIIVTN 305 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTSC-TTCCEEEEEEC
T ss_pred CCCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCC--eEEEEcchhhccc-cCCCeEEEEEC
Confidence 47889999999999999999986 469999999999999999999999986 7889999988653 24789999999
Q ss_pred CCCCCc
Q 012998 412 APCSGL 417 (451)
Q Consensus 412 ~PCSg~ 417 (451)
+|+...
T Consensus 306 pp~~~~ 311 (381)
T 3dmg_A 306 PPFHVG 311 (381)
T ss_dssp CCCCTT
T ss_pred Cchhhc
Confidence 998753
No 130
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.89 E-value=6.9e-10 Score=105.39 Aligned_cols=86 Identities=14% Similarity=0.129 Sum_probs=66.6
Q ss_pred hhhhhhhhCCCCCCeEEeecCCCchHHHHHHHH---cCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccc-
Q 012998 322 AGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASC---LSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF- 397 (451)
Q Consensus 322 s~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~---~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~- 397 (451)
..++..++...++.+|||+|||+|+.|..++.. +.+.++|+++|+++.+++.++ +..++|+++++|+..+
T Consensus 70 ~~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~~~~v~~~~gD~~~~~ 143 (236)
T 2bm8_A 70 QAVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SDMENITLHQGDCSDLT 143 (236)
T ss_dssp HHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GGCTTEEEEECCSSCSG
T ss_pred HHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------ccCCceEEEECcchhHH
Confidence 344445555556789999999999999999997 466789999999999988776 1223599999999874
Q ss_pred --cccCCCCcCEEEEcCC
Q 012998 398 --ADNSTVKCDKVLLDAP 413 (451)
Q Consensus 398 --~~~~~~~fD~VlvD~P 413 (451)
+.....+||.|++|..
T Consensus 144 ~l~~~~~~~fD~I~~d~~ 161 (236)
T 2bm8_A 144 TFEHLREMAHPLIFIDNA 161 (236)
T ss_dssp GGGGGSSSCSSEEEEESS
T ss_pred HHHhhccCCCCEEEECCc
Confidence 3222247999999875
No 131
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.87 E-value=4.2e-09 Score=101.32 Aligned_cols=88 Identities=17% Similarity=0.220 Sum_probs=72.3
Q ss_pred hhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc
Q 012998 321 SAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN 400 (451)
Q Consensus 321 as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~ 400 (451)
-...++..+++.++++|||+|||+|..|..+++. .++|+|+|+|+.+++.+++++.. .. +++++++|+..++..
T Consensus 17 i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~avEid~~~~~~~~~~~~~--~~-~v~~i~~D~~~~~~~ 90 (255)
T 3tqs_A 17 VLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE---CDNLALVEIDRDLVAFLQKKYNQ--QK-NITIYQNDALQFDFS 90 (255)
T ss_dssp HHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT---SSEEEEEECCHHHHHHHHHHHTT--CT-TEEEEESCTTTCCGG
T ss_pred HHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHhh--CC-CcEEEEcchHhCCHH
Confidence 3445667788899999999999999999999876 37999999999999999999876 33 489999999887421
Q ss_pred C---CCCcCEEEEcCCCC
Q 012998 401 S---TVKCDKVLLDAPCS 415 (451)
Q Consensus 401 ~---~~~fD~VlvD~PCS 415 (451)
. .++|| |+.++|..
T Consensus 91 ~~~~~~~~~-vv~NlPY~ 107 (255)
T 3tqs_A 91 SVKTDKPLR-VVGNLPYN 107 (255)
T ss_dssp GSCCSSCEE-EEEECCHH
T ss_pred HhccCCCeE-EEecCCcc
Confidence 1 24677 99999974
No 132
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.87 E-value=5.6e-09 Score=95.43 Aligned_cols=77 Identities=17% Similarity=0.165 Sum_probs=59.7
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc----------
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---------- 399 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~---------- 399 (451)
++++.+|||+|||||+.|..++..+++ .++|+|+|+++.. ...+ +.++++|+.....
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~-v~~~~~d~~~~~~~~~~~~~~i~ 87 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPN-VYFIQGEIGKDNMNNIKNINYID 87 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTT-CEEEECCTTTTSSCCC-------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCC-ceEEEccccchhhhhhccccccc
Confidence 467899999999999999999998764 5899999999831 2344 7888999877540
Q ss_pred --------------cCCCCcCEEEEcCCCCCccc
Q 012998 400 --------------NSTVKCDKVLLDAPCSGLGV 419 (451)
Q Consensus 400 --------------~~~~~fD~VlvD~PCSg~G~ 419 (451)
...++||.|++|.++.-.|.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~ 121 (201)
T 2plw_A 88 NMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGN 121 (201)
T ss_dssp ----CHHHHHHHHHHTTCCEEEEEECCCCCCCSC
T ss_pred cccchhhHHHHHhhcCCCcccEEEeCCCcCCCCC
Confidence 22468999999987654443
No 133
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.86 E-value=3.4e-09 Score=106.10 Aligned_cols=82 Identities=16% Similarity=0.127 Sum_probs=70.3
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHHcCCC----ceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCc
Q 012998 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQ----GLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKC 405 (451)
Q Consensus 330 ~~~~g~~VLDlcagpG~kT~~la~~~~~~----g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~f 405 (451)
.+.++.+|||+|||+|+.++.++..+... ..|+|+|+++.+++.++.|+...|+. +.++++|+.... ..+.|
T Consensus 127 ~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~--~~i~~~D~l~~~--~~~~f 202 (344)
T 2f8l_A 127 QKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQK--MTLLHQDGLANL--LVDPV 202 (344)
T ss_dssp TTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCC--CEEEESCTTSCC--CCCCE
T ss_pred CCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCC--ceEEECCCCCcc--ccCCc
Confidence 56678899999999999999999887543 78999999999999999999999983 678899987643 24689
Q ss_pred CEEEEcCCCC
Q 012998 406 DKVLLDAPCS 415 (451)
Q Consensus 406 D~VlvD~PCS 415 (451)
|+|++|||++
T Consensus 203 D~Ii~NPPfg 212 (344)
T 2f8l_A 203 DVVISDLPVG 212 (344)
T ss_dssp EEEEEECCCS
T ss_pred cEEEECCCCC
Confidence 9999999973
No 134
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.86 E-value=3.2e-09 Score=112.75 Aligned_cols=108 Identities=14% Similarity=0.150 Sum_probs=85.6
Q ss_pred cCceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCC-----------------ceEEEEeCCHHHHHHH
Q 012998 312 EGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQ-----------------GLVYAIDINKGRLRIL 374 (451)
Q Consensus 312 ~G~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~-----------------g~V~AvDi~~~rl~~l 374 (451)
.|.|+--..-+.+++.++.+.++.+|||.|||+|++.+.++..+... ..++|+|+++.+++.+
T Consensus 148 ~G~fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA 227 (541)
T 2ar0_A 148 AGQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLA 227 (541)
T ss_dssp --CCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHH
T ss_pred CCeeeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHH
Confidence 35555555556677888999999999999999999999998876432 3799999999999999
Q ss_pred HHHHHHcCCCc----eEEEEcCccccccccCCCCcCEEEEcCCCCCccc
Q 012998 375 NETAKLHQVNS----VIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGV 419 (451)
Q Consensus 375 ~~~~~~~g~~~----~I~~~~~Da~~~~~~~~~~fD~VlvD~PCSg~G~ 419 (451)
+.|+...|+.+ .+.+.++|+...+.....+||+|+.+||+++...
T Consensus 228 ~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~ 276 (541)
T 2ar0_A 228 LMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAG 276 (541)
T ss_dssp HHHHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSS
T ss_pred HHHHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccc
Confidence 99999888864 1567889987654333468999999999998654
No 135
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.86 E-value=8.7e-09 Score=99.70 Aligned_cols=82 Identities=15% Similarity=0.189 Sum_probs=70.9
Q ss_pred hhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCC
Q 012998 324 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 403 (451)
Q Consensus 324 l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~ 403 (451)
.+...+.+.++.+|||+|||+|..+..+++..+ ..|+++|+++.+++.+++++...|+..++.++.+|+..++ +
T Consensus 55 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~----~ 128 (287)
T 1kpg_A 55 LALGKLGLQPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD----E 128 (287)
T ss_dssp HHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC----C
T ss_pred HHHHHcCCCCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC----C
Confidence 344556778899999999999999999996653 5999999999999999999999998767999999997764 6
Q ss_pred CcCEEEEc
Q 012998 404 KCDKVLLD 411 (451)
Q Consensus 404 ~fD~VlvD 411 (451)
+||+|++.
T Consensus 129 ~fD~v~~~ 136 (287)
T 1kpg_A 129 PVDRIVSI 136 (287)
T ss_dssp CCSEEEEE
T ss_pred CeeEEEEe
Confidence 89999975
No 136
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.86 E-value=8.8e-09 Score=98.24 Aligned_cols=95 Identities=14% Similarity=0.169 Sum_probs=75.3
Q ss_pred eeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcc
Q 012998 315 CAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL 394 (451)
Q Consensus 315 ~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da 394 (451)
|..+......++..+++.++++|||+|||+|..|..+++. .++|+|+|+++.+++.++++++.. . +++++++|+
T Consensus 12 fl~d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~--~-~v~~~~~D~ 85 (244)
T 1qam_A 12 FITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQR---CNFVTAIEIDHKLCKTTENKLVDH--D-NFQVLNKDI 85 (244)
T ss_dssp BCCCHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHTTTC--C-SEEEECCCG
T ss_pred ccCCHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHc---CCeEEEEECCHHHHHHHHHhhccC--C-CeEEEEChH
Confidence 4444455556667778888999999999999999999987 379999999999999999998643 3 489999999
Q ss_pred ccccccCCCCcCEEEEcCCCCC
Q 012998 395 RTFADNSTVKCDKVLLDAPCSG 416 (451)
Q Consensus 395 ~~~~~~~~~~fD~VlvD~PCSg 416 (451)
..++......| .|+.|+|..-
T Consensus 86 ~~~~~~~~~~~-~vv~nlPy~~ 106 (244)
T 1qam_A 86 LQFKFPKNQSY-KIFGNIPYNI 106 (244)
T ss_dssp GGCCCCSSCCC-EEEEECCGGG
T ss_pred HhCCcccCCCe-EEEEeCCccc
Confidence 88753212345 7999999753
No 137
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.85 E-value=8.7e-09 Score=101.38 Aligned_cols=82 Identities=15% Similarity=0.167 Sum_probs=71.8
Q ss_pred hhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCC
Q 012998 324 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 403 (451)
Q Consensus 324 l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~ 403 (451)
.+...+.+.++.+|||+|||+|..+..++... +..|+++|+++.+++.+++++...|+.+++.++.+|+..++ +
T Consensus 81 ~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~ 154 (318)
T 2fk8_A 81 LNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA----E 154 (318)
T ss_dssp HHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC----C
T ss_pred HHHHhcCCCCcCEEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC----C
Confidence 44555677889999999999999999999876 36999999999999999999999999777999999998764 6
Q ss_pred CcCEEEEc
Q 012998 404 KCDKVLLD 411 (451)
Q Consensus 404 ~fD~VlvD 411 (451)
+||+|++.
T Consensus 155 ~fD~v~~~ 162 (318)
T 2fk8_A 155 PVDRIVSI 162 (318)
T ss_dssp CCSEEEEE
T ss_pred CcCEEEEe
Confidence 79999976
No 138
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.85 E-value=2.7e-09 Score=110.65 Aligned_cols=107 Identities=15% Similarity=0.164 Sum_probs=85.4
Q ss_pred cCceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcC------------CCceEEEEeCCHHHHHHHHHHHH
Q 012998 312 EGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLS------------GQGLVYAIDINKGRLRILNETAK 379 (451)
Q Consensus 312 ~G~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~------------~~g~V~AvDi~~~rl~~l~~~~~ 379 (451)
.|.++--..-+.+++.++.+.++.+|||.|||+|+..+.++..+. ....++|+|+++.+++.++.|+.
T Consensus 150 ~G~fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~ 229 (445)
T 2okc_A 150 AGQYFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY 229 (445)
T ss_dssp CGGGCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred CCcccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH
Confidence 344444444566777888899999999999999999999988752 13579999999999999999999
Q ss_pred HcCCCc-eEEEEcCccccccccCCCCcCEEEEcCCCCCcccc
Q 012998 380 LHQVNS-VIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVL 420 (451)
Q Consensus 380 ~~g~~~-~I~~~~~Da~~~~~~~~~~fD~VlvD~PCSg~G~l 420 (451)
..|+.. .+.+.++|+...+. ..+||+|+.+||.++....
T Consensus 230 l~g~~~~~~~i~~gD~l~~~~--~~~fD~Iv~NPPf~~~~~~ 269 (445)
T 2okc_A 230 LHGIGTDRSPIVCEDSLEKEP--STLVDVILANPPFGTRPAG 269 (445)
T ss_dssp HTTCCSSCCSEEECCTTTSCC--SSCEEEEEECCCSSCCCTT
T ss_pred HhCCCcCCCCEeeCCCCCCcc--cCCcCEEEECCCCCCcccc
Confidence 999852 26678999877543 2489999999999987653
No 139
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.85 E-value=3.3e-09 Score=104.23 Aligned_cols=85 Identities=8% Similarity=0.052 Sum_probs=65.4
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHH--cCC-CceEEEEcCccccccccCCCCcCEEE
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKL--HQV-NSVIRTIHADLRTFADNSTVKCDKVL 409 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~--~g~-~~~I~~~~~Da~~~~~~~~~~fD~Vl 409 (451)
.+.+|||+|||+|+.+..++... +.++|+++|+++.+++.+++++.. .++ ..+++++.+|+..+.....++||+|+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 45899999999999999998764 357999999999999999999865 233 23599999999876443457899999
Q ss_pred EcCCCCCcc
Q 012998 410 LDAPCSGLG 418 (451)
Q Consensus 410 vD~PCSg~G 418 (451)
+|+|+.+.|
T Consensus 169 ~d~~~~~~~ 177 (296)
T 1inl_A 169 IDSTDPTAG 177 (296)
T ss_dssp EEC------
T ss_pred EcCCCcccC
Confidence 999986343
No 140
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.85 E-value=7.7e-09 Score=94.94 Aligned_cols=75 Identities=16% Similarity=0.287 Sum_probs=66.9
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEEc
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 411 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD 411 (451)
++.+|||+|||+|..+..++...+ .++|+++|+++.+++.++++++..|+.+ ++++++|+..+.. .++||+|+++
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~--~~~~D~i~~~ 139 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRP-EAHFTLLDSLGKRVRFLRQVQHELKLEN-IEPVQSRVEEFPS--EPPFDGVISR 139 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCSS-EEEEECCTTTSCC--CSCEEEEECS
T ss_pred CCCeEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEecchhhCCc--cCCcCEEEEe
Confidence 478999999999999999998764 5799999999999999999999999987 9999999987652 3689999975
No 141
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.84 E-value=8.8e-09 Score=100.18 Aligned_cols=86 Identities=10% Similarity=0.033 Sum_probs=73.2
Q ss_pred hhhhhhh----CCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccc
Q 012998 323 GLVVAVV----DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA 398 (451)
Q Consensus 323 ~l~~~~l----~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~ 398 (451)
..+...+ .+.++.+|||+|||+|..+..++... ...|+++|+++.+++.++++++..|+.++++++++|+..++
T Consensus 68 ~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 145 (297)
T 2o57_A 68 EWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP 145 (297)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS
T ss_pred HHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC
Confidence 3444555 77889999999999999999999875 35999999999999999999999999767999999998865
Q ss_pred ccCCCCcCEEEEc
Q 012998 399 DNSTVKCDKVLLD 411 (451)
Q Consensus 399 ~~~~~~fD~VlvD 411 (451)
..+++||+|++.
T Consensus 146 -~~~~~fD~v~~~ 157 (297)
T 2o57_A 146 -CEDNSYDFIWSQ 157 (297)
T ss_dssp -SCTTCEEEEEEE
T ss_pred -CCCCCEeEEEec
Confidence 235789999974
No 142
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.84 E-value=2e-09 Score=96.70 Aligned_cols=82 Identities=17% Similarity=0.124 Sum_probs=64.2
Q ss_pred cchhhhhhhhhCC--CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccc
Q 012998 319 DESAGLVVAVVDP--QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT 396 (451)
Q Consensus 319 d~as~l~~~~l~~--~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~ 396 (451)
.+.+.+++..+.. .++.+|||+|||+|..+..++... .|+|+|+++.+++. . ++++++++|+..
T Consensus 7 ~~~~~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~---------~-~~~~~~~~d~~~ 72 (170)
T 3q87_B 7 GEDTYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES---------H-RGGNLVRADLLC 72 (170)
T ss_dssp CHHHHHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT---------C-SSSCEEECSTTT
T ss_pred CccHHHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc---------c-cCCeEEECChhh
Confidence 3444555555665 678899999999999999998752 99999999999987 2 347789999977
Q ss_pred ccccCCCCcCEEEEcCCCCC
Q 012998 397 FADNSTVKCDKVLLDAPCSG 416 (451)
Q Consensus 397 ~~~~~~~~fD~VlvD~PCSg 416 (451)
.. ..++||.|++++|...
T Consensus 73 ~~--~~~~fD~i~~n~~~~~ 90 (170)
T 3q87_B 73 SI--NQESVDVVVFNPPYVP 90 (170)
T ss_dssp TB--CGGGCSEEEECCCCBT
T ss_pred hc--ccCCCCEEEECCCCcc
Confidence 33 2378999999999653
No 143
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.84 E-value=4.6e-09 Score=99.49 Aligned_cols=85 Identities=12% Similarity=0.060 Sum_probs=69.8
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc-cCCCCcCEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD-NSTVKCDKVL 409 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~-~~~~~fD~Vl 409 (451)
..+|.+|||+|||+|..+.++++.. ...|++||+++.+++.++++.+..+.. +.++.+|+..+.. ..+++||.|+
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~--~~~v~~id~~~~~~~~a~~~~~~~~~~--~~~~~~~a~~~~~~~~~~~FD~i~ 133 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQTHK--VIPLKGLWEDVAPTLPDGHFDGIL 133 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSC--EEEEEEEECCHHHHHHHHHHGGGCSSE--EEEEESCHHHHGGGSCTTCEEEEE
T ss_pred ccCCCeEEEECCCccHHHHHHHHhC--CcEEEEEeCCHHHHHHHHHHHhhCCCc--eEEEeehHHhhcccccccCCceEE
Confidence 3579999999999999999998753 358999999999999999999988863 7888999877643 3367899999
Q ss_pred EcCCCCCccc
Q 012998 410 LDAPCSGLGV 419 (451)
Q Consensus 410 vD~PCSg~G~ 419 (451)
+|+..+....
T Consensus 134 ~D~~~~~~~~ 143 (236)
T 3orh_A 134 YDTYPLSEET 143 (236)
T ss_dssp ECCCCCBGGG
T ss_pred Eeeeecccch
Confidence 9987655443
No 144
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.83 E-value=2.9e-09 Score=104.51 Aligned_cols=82 Identities=13% Similarity=0.046 Sum_probs=71.0
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEE
Q 012998 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 409 (451)
Q Consensus 330 ~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vl 409 (451)
.+.++.+|||+|||+|..+..++....+.+.|+++|+++.+++.+++++...|+.++++++++|+..++. .++||+|+
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~fD~v~ 192 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDT--REGYDLLT 192 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCC--CSCEEEEE
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCc--cCCeEEEE
Confidence 4568999999999999999998644455689999999999999999999999998889999999998763 37899999
Q ss_pred EcCC
Q 012998 410 LDAP 413 (451)
Q Consensus 410 vD~P 413 (451)
+..+
T Consensus 193 ~~~~ 196 (305)
T 3ocj_A 193 SNGL 196 (305)
T ss_dssp CCSS
T ss_pred ECCh
Confidence 7543
No 145
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.82 E-value=1.1e-08 Score=111.92 Aligned_cols=107 Identities=19% Similarity=0.203 Sum_probs=83.3
Q ss_pred hhhhcCceeeecch------hhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcC-------------------------
Q 012998 308 GLLKEGLCAVQDES------AGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLS------------------------- 356 (451)
Q Consensus 308 ~~~~~G~~~vQd~a------s~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~------------------------- 356 (451)
.+++.|+-..+..+ +..++.+....++..|||.|||+|++.+.+|....
T Consensus 159 ~LhkRgyr~~~~~apl~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~ 238 (703)
T 3v97_A 159 GLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 238 (703)
T ss_dssp CTTCCSSSCSSCCCSSCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHH
T ss_pred ccccccccccCCCCCCcHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHH
Confidence 45666664443332 23334455677899999999999999998887631
Q ss_pred ----------------CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccC-CCCcCEEEEcCCC
Q 012998 357 ----------------GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS-TVKCDKVLLDAPC 414 (451)
Q Consensus 357 ----------------~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~-~~~fD~VlvD~PC 414 (451)
....|+|+|+++.+++.++.|++..|+.+.|++.++|+.++.... .+.||+|++|||.
T Consensus 239 ~~~~ea~~~~~~~~~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPY 313 (703)
T 3v97_A 239 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPY 313 (703)
T ss_dssp HHHHHHHHHHHHHHHHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCC
T ss_pred HHHHHHHHHhhhccccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCc
Confidence 125899999999999999999999999988999999998874322 2389999999998
No 146
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.81 E-value=1e-08 Score=95.04 Aligned_cols=86 Identities=14% Similarity=0.092 Sum_probs=70.3
Q ss_pred hhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc----eEEEEcCccccccc
Q 012998 324 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS----VIRTIHADLRTFAD 399 (451)
Q Consensus 324 l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~----~I~~~~~Da~~~~~ 399 (451)
.+...+...++.+|||+|||+|..+..+++.. +...|+++|+++.+++.+++++...++.+ ++.++++|+...+.
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 98 (217)
T 3jwh_A 20 GVVAALKQSNARRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDK 98 (217)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCG
T ss_pred HHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccc
Confidence 44455566778999999999999999998863 34699999999999999999999888864 59999999865442
Q ss_pred cCCCCcCEEEEc
Q 012998 400 NSTVKCDKVLLD 411 (451)
Q Consensus 400 ~~~~~fD~VlvD 411 (451)
..++||+|++.
T Consensus 99 -~~~~fD~v~~~ 109 (217)
T 3jwh_A 99 -RFHGYDAATVI 109 (217)
T ss_dssp -GGCSCSEEEEE
T ss_pred -cCCCcCEEeeH
Confidence 34689999964
No 147
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.81 E-value=1.1e-08 Score=99.36 Aligned_cols=87 Identities=16% Similarity=0.145 Sum_probs=72.1
Q ss_pred hhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccC
Q 012998 322 AGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS 401 (451)
Q Consensus 322 s~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~ 401 (451)
...++..+++.++ +|||+|||+|..|..+++. .++|+|+|+|+.+++.+++++.. . +++++++|+..++...
T Consensus 36 ~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~---~~~V~avEid~~~~~~l~~~~~~---~-~v~vi~~D~l~~~~~~ 107 (271)
T 3fut_A 36 LRRIVEAARPFTG-PVFEVGPGLGALTRALLEA---GAEVTAIEKDLRLRPVLEETLSG---L-PVRLVFQDALLYPWEE 107 (271)
T ss_dssp HHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT---TCCEEEEESCGGGHHHHHHHTTT---S-SEEEEESCGGGSCGGG
T ss_pred HHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcCC---C-CEEEEECChhhCChhh
Confidence 4456677888899 9999999999999999986 37899999999999999998862 3 4899999998875322
Q ss_pred CCCcCEEEEcCCCCC
Q 012998 402 TVKCDKVLLDAPCSG 416 (451)
Q Consensus 402 ~~~fD~VlvD~PCSg 416 (451)
...||.|+.++|..-
T Consensus 108 ~~~~~~iv~NlPy~i 122 (271)
T 3fut_A 108 VPQGSLLVANLPYHI 122 (271)
T ss_dssp SCTTEEEEEEECSSC
T ss_pred ccCccEEEecCcccc
Confidence 236899999999754
No 148
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.81 E-value=8.4e-09 Score=91.09 Aligned_cols=77 Identities=27% Similarity=0.353 Sum_probs=62.9
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc-------cCCC
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD-------NSTV 403 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~-------~~~~ 403 (451)
+.++.+|||+|||+|..+..++..+++.+.|+++|+++ +++. . ++.++.+|+...+. ...+
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------~-~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------V-GVDFLQGDFRDELVMKALLERVGDS 87 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------T-TEEEEESCTTSHHHHHHHHHHHTTC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------C-cEEEEEcccccchhhhhhhccCCCC
Confidence 67889999999999999999999876568999999999 6532 3 38889999987531 2346
Q ss_pred CcCEEEEcCCCCCccc
Q 012998 404 KCDKVLLDAPCSGLGV 419 (451)
Q Consensus 404 ~fD~VlvD~PCSg~G~ 419 (451)
+||.|++|+|+...|.
T Consensus 88 ~~D~i~~~~~~~~~~~ 103 (180)
T 1ej0_A 88 KVQVVMSDMAPNMSGT 103 (180)
T ss_dssp CEEEEEECCCCCCCSC
T ss_pred ceeEEEECCCccccCC
Confidence 8999999999887665
No 149
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.81 E-value=7.8e-09 Score=100.31 Aligned_cols=87 Identities=21% Similarity=0.055 Sum_probs=73.3
Q ss_pred hhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCC
Q 012998 323 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 402 (451)
Q Consensus 323 ~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~ 402 (451)
.+...+....++.+|||+|||+|..+..++...++...|+++|+++.+++.+++++...+. +++++++|+..++. .
T Consensus 12 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~--~ 87 (284)
T 3gu3_A 12 FLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEIEL--N 87 (284)
T ss_dssp HHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTCCC--S
T ss_pred HHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhcCc--C
Confidence 3444445677899999999999999999998876568999999999999999999998876 48999999998653 4
Q ss_pred CCcCEEEEcCC
Q 012998 403 VKCDKVLLDAP 413 (451)
Q Consensus 403 ~~fD~VlvD~P 413 (451)
++||+|++...
T Consensus 88 ~~fD~v~~~~~ 98 (284)
T 3gu3_A 88 DKYDIAICHAF 98 (284)
T ss_dssp SCEEEEEEESC
T ss_pred CCeeEEEECCh
Confidence 68999998653
No 150
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.81 E-value=6.9e-10 Score=105.76 Aligned_cols=97 Identities=13% Similarity=0.182 Sum_probs=78.8
Q ss_pred eeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcc
Q 012998 315 CAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL 394 (451)
Q Consensus 315 ~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da 394 (451)
|..+......++..+++.++++|||+|||+|..|..++.. .++|+|+|+++.+++.++++++ +.. +++++++|+
T Consensus 11 fl~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~---~~~v~~id~~~~~~~~a~~~~~--~~~-~v~~~~~D~ 84 (245)
T 1yub_A 11 FLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI---SKQVTSIELDSHLFNLSSEKLK--LNT-RVTLIHQDI 84 (245)
T ss_dssp BCCCTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHH---SSEEEESSSSCSSSSSSSCTTT--TCS-EEEECCSCC
T ss_pred CCCCHHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHh---CCeEEEEECCHHHHHHHHHHhc--cCC-ceEEEECCh
Confidence 4556666667778888889999999999999999999987 2799999999999999988876 333 589999999
Q ss_pred ccccccCCCCcCEEEEcCCCCCcc
Q 012998 395 RTFADNSTVKCDKVLLDAPCSGLG 418 (451)
Q Consensus 395 ~~~~~~~~~~fD~VlvD~PCSg~G 418 (451)
..++....++| .|++++|...++
T Consensus 85 ~~~~~~~~~~f-~vv~n~Py~~~~ 107 (245)
T 1yub_A 85 LQFQFPNKQRY-KIVGNIPYHLST 107 (245)
T ss_dssp TTTTCCCSSEE-EEEEECCSSSCH
T ss_pred hhcCcccCCCc-EEEEeCCccccH
Confidence 88752212578 899999987653
No 151
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.80 E-value=1.9e-08 Score=98.22 Aligned_cols=81 Identities=16% Similarity=0.103 Sum_probs=68.1
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc-CCCceEEEEcCccccccccC-----CCCc
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH-QVNSVIRTIHADLRTFADNS-----TVKC 405 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~-g~~~~I~~~~~Da~~~~~~~-----~~~f 405 (451)
.++.+|||+|||+|..+..++..+.+..+|+|+|+++.+++.++++++.. +...+++++++|+..++... .++|
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 57899999999999999999987656789999999999999999999987 44445999999998876322 2689
Q ss_pred CEEEEcC
Q 012998 406 DKVLLDA 412 (451)
Q Consensus 406 D~VlvD~ 412 (451)
|+|++..
T Consensus 115 D~V~~~~ 121 (299)
T 3g5t_A 115 DMITAVE 121 (299)
T ss_dssp EEEEEES
T ss_pred eEEeHhh
Confidence 9999853
No 152
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.80 E-value=9.2e-09 Score=96.91 Aligned_cols=77 Identities=13% Similarity=0.122 Sum_probs=64.9
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccc-ccCCCCcCEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA-DNSTVKCDKVL 409 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~-~~~~~~fD~Vl 409 (451)
+.++.+|||+|||+|..+..++.. +...|+++|+++.+++.++++++..+ . ++.++++|+.++. +..+++||+|+
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~-~-~v~~~~~d~~~~~~~~~~~~fD~V~ 133 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEA--PIDEHWIIECNDGVFQRLRDWAPRQT-H-KVIPLKGLWEDVAPTLPDGHFDGIL 133 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTS--CEEEEEEEECCHHHHHHHHHHGGGCS-S-EEEEEESCHHHHGGGSCTTCEEEEE
T ss_pred CCCCCeEEEEeccCCHHHHHHHhc--CCCeEEEEcCCHHHHHHHHHHHHhcC-C-CeEEEecCHHHhhcccCCCceEEEE
Confidence 567899999999999999999654 23489999999999999999998887 3 4899999998872 23357899999
Q ss_pred Ec
Q 012998 410 LD 411 (451)
Q Consensus 410 vD 411 (451)
+|
T Consensus 134 ~d 135 (236)
T 1zx0_A 134 YD 135 (236)
T ss_dssp EC
T ss_pred EC
Confidence 97
No 153
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.80 E-value=4.7e-09 Score=102.24 Aligned_cols=80 Identities=11% Similarity=0.118 Sum_probs=67.1
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc--CC--------CceEEEEcCccccccccC
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--QV--------NSVIRTIHADLRTFADNS 401 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~--g~--------~~~I~~~~~Da~~~~~~~ 401 (451)
.++.+|||+|||+|+.+..++.. +.++|+++|+++.+++.+++++ .. ++ ..+++++.+|+..+...
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~- 149 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN- 149 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-
Confidence 45689999999999999999886 4579999999999999999998 54 33 34599999999876433
Q ss_pred CCCcCEEEEcCCCC
Q 012998 402 TVKCDKVLLDAPCS 415 (451)
Q Consensus 402 ~~~fD~VlvD~PCS 415 (451)
.++||+|++|+|+.
T Consensus 150 ~~~fD~Ii~d~~~~ 163 (281)
T 1mjf_A 150 NRGFDVIIADSTDP 163 (281)
T ss_dssp CCCEEEEEEECCCC
T ss_pred cCCeeEEEECCCCC
Confidence 57899999999973
No 154
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.80 E-value=1e-08 Score=104.37 Aligned_cols=89 Identities=9% Similarity=0.051 Sum_probs=71.5
Q ss_pred hhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHH-------HHcCCC-ceEEEEcCcccc
Q 012998 325 VVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETA-------KLHQVN-SVIRTIHADLRT 396 (451)
Q Consensus 325 ~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~-------~~~g~~-~~I~~~~~Da~~ 396 (451)
+...+.+.+|++|||+|||+|..++.+|...+ ..+|+|||+++.+++.+++++ +.+|+. ++|+++++|+.+
T Consensus 165 il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~ 243 (438)
T 3uwp_A 165 MIDEIKMTDDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLS 243 (438)
T ss_dssp HHHHHCCCTTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTS
T ss_pred HHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccC
Confidence 44567889999999999999999999998753 457999999999999998865 456762 469999999988
Q ss_pred ccccC-CCCcCEEEEcCCC
Q 012998 397 FADNS-TVKCDKVLLDAPC 414 (451)
Q Consensus 397 ~~~~~-~~~fD~VlvD~PC 414 (451)
++... ...||+|+++.+|
T Consensus 244 lp~~d~~~~aDVVf~Nn~~ 262 (438)
T 3uwp_A 244 EEWRERIANTSVIFVNNFA 262 (438)
T ss_dssp HHHHHHHHTCSEEEECCTT
T ss_pred CccccccCCccEEEEcccc
Confidence 65311 1369999998876
No 155
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.79 E-value=9.1e-09 Score=102.96 Aligned_cols=91 Identities=12% Similarity=0.162 Sum_probs=76.5
Q ss_pred cchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccc
Q 012998 319 DESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA 398 (451)
Q Consensus 319 d~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~ 398 (451)
|..+.++...+.+.++.+|||+|||+|..+..++... +..+|+++|+++.+++.+++++...++. +.++.+|+....
T Consensus 182 d~~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~~~--~~~~~~d~~~~~ 258 (343)
T 2pjd_A 182 DVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHS-PKIRLTLCDVSAPAVEASRATLAANGVE--GEVFASNVFSEV 258 (343)
T ss_dssp CHHHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHC-TTCBCEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTC
T ss_pred cHHHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCC--CEEEEccccccc
Confidence 4456777777777778899999999999999999874 3469999999999999999999999986 456788987653
Q ss_pred ccCCCCcCEEEEcCCCC
Q 012998 399 DNSTVKCDKVLLDAPCS 415 (451)
Q Consensus 399 ~~~~~~fD~VlvD~PCS 415 (451)
.++||.|++++|..
T Consensus 259 ---~~~fD~Iv~~~~~~ 272 (343)
T 2pjd_A 259 ---KGRFDMIISNPPFH 272 (343)
T ss_dssp ---CSCEEEEEECCCCC
T ss_pred ---cCCeeEEEECCCcc
Confidence 46899999999964
No 156
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.79 E-value=1.4e-08 Score=98.29 Aligned_cols=77 Identities=18% Similarity=0.234 Sum_probs=67.5
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEEcC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDA 412 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD~ 412 (451)
++.+|||+|||+|..+..++.. ...|+++|+++.+++.+++++...|+..+++++++|+..++...+++||+|++..
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 144 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHA 144 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEES
T ss_pred CCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECc
Confidence 3689999999999999999886 4799999999999999999999999966699999999988755568999999854
No 157
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.79 E-value=2.2e-08 Score=96.20 Aligned_cols=84 Identities=14% Similarity=0.234 Sum_probs=71.8
Q ss_pred hhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCc
Q 012998 326 VAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKC 405 (451)
Q Consensus 326 ~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~f 405 (451)
.......++.+|||+|||+|..+..++... +.++|+++|+++.+++.+++++...|+.+ ++++.+|+..++ ...++|
T Consensus 30 ~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-~~~~~~d~~~~~-~~~~~f 106 (276)
T 3mgg_A 30 HHDTVYPPGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEKNGIKN-VKFLQANIFSLP-FEDSSF 106 (276)
T ss_dssp HTTCCCCTTCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEECCGGGCC-SCTTCE
T ss_pred hhcccCCCCCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCC-cEEEEcccccCC-CCCCCe
Confidence 334445789999999999999999999884 35799999999999999999999999986 899999998865 235789
Q ss_pred CEEEEcC
Q 012998 406 DKVLLDA 412 (451)
Q Consensus 406 D~VlvD~ 412 (451)
|+|++..
T Consensus 107 D~v~~~~ 113 (276)
T 3mgg_A 107 DHIFVCF 113 (276)
T ss_dssp EEEEEES
T ss_pred eEEEEec
Confidence 9999854
No 158
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.79 E-value=8.4e-09 Score=94.51 Aligned_cols=74 Identities=18% Similarity=0.090 Sum_probs=60.2
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEE
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
.+.++|||+|||+|..++.++...+. .+|+|+|+|+.+++.+++++.++|+.+++.+ .|..... ..++||+|+.
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~-a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~--~~~~~DvVLa 121 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEK-IIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDV--YKGTYDVVFL 121 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCC-CEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHH--TTSEEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCC-CEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccC--CCCCcChhhH
Confidence 45779999999999999998776554 5999999999999999999999999865766 5554332 3467888875
No 159
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.78 E-value=1.2e-08 Score=102.45 Aligned_cols=82 Identities=13% Similarity=0.163 Sum_probs=70.8
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEE
Q 012998 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 409 (451)
Q Consensus 330 ~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vl 409 (451)
...++.+|||+|||+|..+..+++. +.++|+|+|++ .+++.++++++..|+.++|+++++|+.+++ ...++||+|+
T Consensus 63 ~~~~~~~VLDvGcG~G~~~~~la~~--g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~Ii 138 (349)
T 3q7e_A 63 HLFKDKVVLDVGSGTGILCMFAAKA--GARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVE-LPVEKVDIII 138 (349)
T ss_dssp HHHTTCEEEEESCTTSHHHHHHHHT--TCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCC-CSSSCEEEEE
T ss_pred ccCCCCEEEEEeccchHHHHHHHHC--CCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHcc-CCCCceEEEE
Confidence 3457899999999999999999987 45699999999 599999999999999988999999999874 2357899999
Q ss_pred EcCCCC
Q 012998 410 LDAPCS 415 (451)
Q Consensus 410 vD~PCS 415 (451)
++.+..
T Consensus 139 s~~~~~ 144 (349)
T 3q7e_A 139 SEWMGY 144 (349)
T ss_dssp ECCCBB
T ss_pred Eccccc
Confidence 987533
No 160
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.78 E-value=1.1e-08 Score=94.98 Aligned_cols=86 Identities=14% Similarity=0.134 Sum_probs=69.7
Q ss_pred hhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc----eEEEEcCccccccc
Q 012998 324 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS----VIRTIHADLRTFAD 399 (451)
Q Consensus 324 l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~----~I~~~~~Da~~~~~ 399 (451)
.+...+...++.+|||+|||+|..+..++... +...|+++|+++.+++.+++++...++.+ ++.++++|+...+.
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 98 (219)
T 3jwg_A 20 TVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDK 98 (219)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCG
T ss_pred HHHHHHhhcCCCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccccc
Confidence 34455555678999999999999999998763 34799999999999999999999888764 58999999865542
Q ss_pred cCCCCcCEEEEc
Q 012998 400 NSTVKCDKVLLD 411 (451)
Q Consensus 400 ~~~~~fD~VlvD 411 (451)
..++||+|++.
T Consensus 99 -~~~~fD~V~~~ 109 (219)
T 3jwg_A 99 -RFSGYDAATVI 109 (219)
T ss_dssp -GGTTCSEEEEE
T ss_pred -ccCCCCEEEEH
Confidence 34689999963
No 161
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.78 E-value=1.7e-08 Score=97.60 Aligned_cols=82 Identities=20% Similarity=0.186 Sum_probs=70.4
Q ss_pred hhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCc
Q 012998 326 VAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKC 405 (451)
Q Consensus 326 ~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~f 405 (451)
...+...++.+|||+|||+|..+..++.. +..|+++|+++.+++.+++++...|+ + +.++++|+..++. .++|
T Consensus 113 ~~~~~~~~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~~-~-~~~~~~d~~~~~~--~~~f 185 (286)
T 3m70_A 113 VDAAKIISPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKENL-N-ISTALYDINAANI--QENY 185 (286)
T ss_dssp HHHHHHSCSCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-C-EEEEECCGGGCCC--CSCE
T ss_pred HHHhhccCCCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcCC-c-eEEEEeccccccc--cCCc
Confidence 34455557899999999999999999986 46999999999999999999999998 4 8999999988753 5789
Q ss_pred CEEEEcCCC
Q 012998 406 DKVLLDAPC 414 (451)
Q Consensus 406 D~VlvD~PC 414 (451)
|+|++..+.
T Consensus 186 D~i~~~~~~ 194 (286)
T 3m70_A 186 DFIVSTVVF 194 (286)
T ss_dssp EEEEECSSG
T ss_pred cEEEEccch
Confidence 999987643
No 162
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.77 E-value=2.1e-08 Score=101.72 Aligned_cols=81 Identities=15% Similarity=0.244 Sum_probs=71.1
Q ss_pred hhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCE
Q 012998 328 VVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDK 407 (451)
Q Consensus 328 ~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~ 407 (451)
.+...++.+|||+|||+|..+..+++. +..+|+|+|++ .+++.++++++..|+.++|+++++|+.++.. .++||+
T Consensus 58 ~~~~~~~~~VLDlGcGtG~ls~~la~~--g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~D~ 132 (376)
T 3r0q_C 58 NKHHFEGKTVLDVGTGSGILAIWSAQA--GARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISL--PEKVDV 132 (376)
T ss_dssp TTTTTTTCEEEEESCTTTHHHHHHHHT--TCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCC--SSCEEE
T ss_pred ccccCCCCEEEEeccCcCHHHHHHHhc--CCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCc--CCcceE
Confidence 345678999999999999999999886 34599999999 9999999999999998889999999988753 378999
Q ss_pred EEEcCC
Q 012998 408 VLLDAP 413 (451)
Q Consensus 408 VlvD~P 413 (451)
|++++.
T Consensus 133 Iv~~~~ 138 (376)
T 3r0q_C 133 IISEWM 138 (376)
T ss_dssp EEECCC
T ss_pred EEEcCh
Confidence 999874
No 163
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.76 E-value=4.9e-09 Score=96.86 Aligned_cols=78 Identities=8% Similarity=0.083 Sum_probs=62.6
Q ss_pred hCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc------------CCCceEEEEcCcccc
Q 012998 329 VDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH------------QVNSVIRTIHADLRT 396 (451)
Q Consensus 329 l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~------------g~~~~I~~~~~Da~~ 396 (451)
+.+.++.+|||+|||+|..+..+++. +..|+|+|+|+.+++.++++.... +.. +|+++++|+.+
T Consensus 18 l~~~~~~~vLD~GCG~G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~d~~~ 93 (203)
T 1pjz_A 18 LNVVPGARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAP-GIEIWCGDFFA 93 (203)
T ss_dssp HCCCTTCEEEETTTCCSHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECS-SSEEEEECCSS
T ss_pred cccCCCCEEEEeCCCCcHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCC-ccEEEECcccc
Confidence 45668899999999999999999986 369999999999999999876531 123 38899999988
Q ss_pred ccccCCCCcCEEEE
Q 012998 397 FADNSTVKCDKVLL 410 (451)
Q Consensus 397 ~~~~~~~~fD~Vlv 410 (451)
++....++||.|++
T Consensus 94 l~~~~~~~fD~v~~ 107 (203)
T 1pjz_A 94 LTARDIGHCAAFYD 107 (203)
T ss_dssp STHHHHHSEEEEEE
T ss_pred CCcccCCCEEEEEE
Confidence 76321158999985
No 164
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.76 E-value=8e-09 Score=95.47 Aligned_cols=83 Identities=14% Similarity=0.099 Sum_probs=69.9
Q ss_pred hhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc
Q 012998 321 SAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN 400 (451)
Q Consensus 321 as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~ 400 (451)
-..++...+...++.+|||+|||+|..+..++.. ...|+++|+++.+++.+++++...+ +++++++|+..++
T Consensus 39 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~-- 110 (216)
T 3ofk_A 39 HTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPH---CKRLTVIDVMPRAIGRACQRTKRWS---HISWAATDILQFS-- 110 (216)
T ss_dssp HHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGG---EEEEEEEESCHHHHHHHHHHTTTCS---SEEEEECCTTTCC--
T ss_pred HHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcccCC---CeEEEEcchhhCC--
Confidence 3445555677778899999999999999999876 3689999999999999999988755 4899999998876
Q ss_pred CCCCcCEEEEc
Q 012998 401 STVKCDKVLLD 411 (451)
Q Consensus 401 ~~~~fD~VlvD 411 (451)
..++||+|++.
T Consensus 111 ~~~~fD~v~~~ 121 (216)
T 3ofk_A 111 TAELFDLIVVA 121 (216)
T ss_dssp CSCCEEEEEEE
T ss_pred CCCCccEEEEc
Confidence 35789999985
No 165
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.76 E-value=2.3e-08 Score=100.09 Aligned_cols=84 Identities=14% Similarity=0.186 Sum_probs=70.6
Q ss_pred hhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCc
Q 012998 326 VAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKC 405 (451)
Q Consensus 326 ~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~f 405 (451)
...+...++.+|||+|||+|..+..+++. +.++|+|+|+++ +++.++++++..|+.++|+++++|+.+++ ...++|
T Consensus 57 ~~~~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~ 132 (340)
T 2fyt_A 57 YQNPHIFKDKVVLDVGCGTGILSMFAAKA--GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVH-LPVEKV 132 (340)
T ss_dssp HHCGGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC-CSCSCE
T ss_pred HhhhhhcCCCEEEEeeccCcHHHHHHHHc--CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhc-CCCCcE
Confidence 34455678999999999999999999886 346999999996 99999999999999666999999998864 234789
Q ss_pred CEEEEcCC
Q 012998 406 DKVLLDAP 413 (451)
Q Consensus 406 D~VlvD~P 413 (451)
|+|+++..
T Consensus 133 D~Ivs~~~ 140 (340)
T 2fyt_A 133 DVIISEWM 140 (340)
T ss_dssp EEEEECCC
T ss_pred EEEEEcCc
Confidence 99999863
No 166
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.76 E-value=1.8e-08 Score=100.34 Aligned_cols=84 Identities=15% Similarity=0.180 Sum_probs=70.9
Q ss_pred hCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEE
Q 012998 329 VDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKV 408 (451)
Q Consensus 329 l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~V 408 (451)
+...++.+|||+|||+|..+..+++. +..+|+|+|++ .+++.++++++..|+.++|+++++|+.+++. ..++||+|
T Consensus 34 ~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~~D~I 109 (328)
T 1g6q_1 34 KDLFKDKIVLDVGCGTGILSMFAAKH--GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHL-PFPKVDII 109 (328)
T ss_dssp HHHHTTCEEEEETCTTSHHHHHHHHT--CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCC-SSSCEEEE
T ss_pred HhhcCCCEEEEecCccHHHHHHHHHC--CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccC-CCCcccEE
Confidence 34457889999999999999998885 34699999999 6999999999999998889999999988642 24689999
Q ss_pred EEcCCCCC
Q 012998 409 LLDAPCSG 416 (451)
Q Consensus 409 lvD~PCSg 416 (451)
+++++...
T Consensus 110 vs~~~~~~ 117 (328)
T 1g6q_1 110 ISEWMGYF 117 (328)
T ss_dssp EECCCBTT
T ss_pred EEeCchhh
Confidence 99987443
No 167
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.76 E-value=6.2e-09 Score=106.42 Aligned_cols=95 Identities=16% Similarity=0.182 Sum_probs=74.8
Q ss_pred CceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcC
Q 012998 313 GLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA 392 (451)
Q Consensus 313 G~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~ 392 (451)
|.++-...-+..++..+.+.++.+|||+|||+|+.+..+++.++....|+|+|+++.+++.+ . .+.++++
T Consensus 19 g~~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~-~~~~~~~ 88 (421)
T 2ih2_A 19 GRVETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------P-WAEGILA 88 (421)
T ss_dssp --CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------T-TEEEEES
T ss_pred ceEeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------C-CCcEEeC
Confidence 44444445556666777766678999999999999999998875567999999999998766 2 3889999
Q ss_pred ccccccccCCCCcCEEEEcCCCCCccc
Q 012998 393 DLRTFADNSTVKCDKVLLDAPCSGLGV 419 (451)
Q Consensus 393 Da~~~~~~~~~~fD~VlvD~PCSg~G~ 419 (451)
|+..+.. .+.||+|+++||+...+.
T Consensus 89 D~~~~~~--~~~fD~Ii~NPPy~~~~~ 113 (421)
T 2ih2_A 89 DFLLWEP--GEAFDLILGNPPYGIVGE 113 (421)
T ss_dssp CGGGCCC--SSCEEEEEECCCCCCBSC
T ss_pred ChhhcCc--cCCCCEEEECcCccCccc
Confidence 9987642 368999999999987765
No 168
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.76 E-value=1.1e-08 Score=100.42 Aligned_cols=82 Identities=10% Similarity=0.145 Sum_probs=64.8
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcC---C-CceEEEEcCccccccccCCCCcCE
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQ---V-NSVIRTIHADLRTFADNSTVKCDK 407 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g---~-~~~I~~~~~Da~~~~~~~~~~fD~ 407 (451)
.++.+|||+|||+|+.+..++.. .+..+|+++|+++.+++.+++++...+ + ..+++++.+|+..+.....++||+
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDv 160 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRH-KNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTC-TTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccE
Confidence 34679999999999999999875 345789999999999999999998753 1 225899999998875544578999
Q ss_pred EEEcCCC
Q 012998 408 VLLDAPC 414 (451)
Q Consensus 408 VlvD~PC 414 (451)
|++|+|.
T Consensus 161 Ii~D~~~ 167 (294)
T 3adn_A 161 IISDCTD 167 (294)
T ss_dssp EEECC--
T ss_pred EEECCCC
Confidence 9999885
No 169
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.75 E-value=3e-08 Score=99.41 Aligned_cols=85 Identities=12% Similarity=0.162 Sum_probs=71.4
Q ss_pred hhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCc
Q 012998 326 VAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKC 405 (451)
Q Consensus 326 ~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~f 405 (451)
...+...++.+|||+|||+|..+..++.. +.++|+|+|+++ +++.++++++..|+.++|+++++|+.+++. .++|
T Consensus 43 ~~~l~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~--~~~~ 117 (348)
T 2y1w_A 43 LQNHTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL--PEQV 117 (348)
T ss_dssp HHTGGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC--SSCE
T ss_pred HhccccCCcCEEEEcCCCccHHHHHHHhC--CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCC--CCce
Confidence 34455668999999999999999998885 446999999996 889999999999996679999999988642 3689
Q ss_pred CEEEEcCCCC
Q 012998 406 DKVLLDAPCS 415 (451)
Q Consensus 406 D~VlvD~PCS 415 (451)
|+|+++.+..
T Consensus 118 D~Ivs~~~~~ 127 (348)
T 2y1w_A 118 DIIISEPMGY 127 (348)
T ss_dssp EEEEECCCBT
T ss_pred eEEEEeCchh
Confidence 9999987743
No 170
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.75 E-value=9.1e-09 Score=99.58 Aligned_cols=84 Identities=17% Similarity=0.260 Sum_probs=72.1
Q ss_pred hhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccC---
Q 012998 325 VVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS--- 401 (451)
Q Consensus 325 ~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~--- 401 (451)
++..|++++|+.+||++||.||.|..+++. .|+|+|+|.++.+++.+++ ++. ++++++++|+.++....
T Consensus 14 ~le~L~~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~L~~~ 85 (285)
T 1wg8_A 14 ALDLLAVRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLKRHLAAL 85 (285)
T ss_dssp HHHHHTCCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHHHHHHHT
T ss_pred HHHhhCCCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHHHHHHHc
Confidence 456678899999999999999999999997 5899999999999999998 754 35999999998875321
Q ss_pred -CCCcCEEEEcCCCCC
Q 012998 402 -TVKCDKVLLDAPCSG 416 (451)
Q Consensus 402 -~~~fD~VlvD~PCSg 416 (451)
.++||.|++|.++|+
T Consensus 86 g~~~vDgIL~DLGvSS 101 (285)
T 1wg8_A 86 GVERVDGILADLGVSS 101 (285)
T ss_dssp TCSCEEEEEEECSCCH
T ss_pred CCCCcCEEEeCCcccc
Confidence 257999999999987
No 171
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.75 E-value=2e-08 Score=95.26 Aligned_cols=82 Identities=11% Similarity=0.156 Sum_probs=65.9
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHH------cCCCceEEEEcCcccc-ccc-cCC
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKL------HQVNSVIRTIHADLRT-FAD-NST 402 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~------~g~~~~I~~~~~Da~~-~~~-~~~ 402 (451)
..++.+|||+|||+|..+..+|... +...|+|+|+++.+++.++++++. .++.| |.++++|+.. ++. ...
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~n-v~~~~~d~~~~l~~~~~~ 121 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQN-IACLRSNAMKHLPNFFYK 121 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTT-EEEEECCTTTCHHHHCCT
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCe-EEEEECcHHHhhhhhCCC
Confidence 3457799999999999999999875 357899999999999999998875 46666 9999999987 432 235
Q ss_pred CCcCEEEEcCCC
Q 012998 403 VKCDKVLLDAPC 414 (451)
Q Consensus 403 ~~fD~VlvD~PC 414 (451)
+.||.|++..|.
T Consensus 122 ~~~D~v~~~~~d 133 (235)
T 3ckk_A 122 GQLTKMFFLFPD 133 (235)
T ss_dssp TCEEEEEEESCC
T ss_pred cCeeEEEEeCCC
Confidence 789999987553
No 172
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.74 E-value=1.1e-08 Score=96.43 Aligned_cols=81 Identities=12% Similarity=0.049 Sum_probs=66.5
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCC-HHHHHHH---HHHHHHcCCCceEEEEcCccccccccCCCCcC
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDIN-KGRLRIL---NETAKLHQVNSVIRTIHADLRTFADNSTVKCD 406 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~-~~rl~~l---~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD 406 (451)
.+++++|||+|||+|..+..++... +.+.|+|+|+| +.+++.+ ++++++.|+.| +.++++|+..++......+|
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~-~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~-v~~~~~d~~~l~~~~~d~v~ 99 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAIND-QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSN-VVFVIAAAESLPFELKNIAD 99 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTC-TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSS-EEEECCBTTBCCGGGTTCEE
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCC-eEEEEcCHHHhhhhccCeEE
Confidence 3578999999999999999998753 45789999999 6666666 88888899986 89999999988643346778
Q ss_pred EEEEcCC
Q 012998 407 KVLLDAP 413 (451)
Q Consensus 407 ~VlvD~P 413 (451)
.|.+..|
T Consensus 100 ~i~~~~~ 106 (225)
T 3p2e_A 100 SISILFP 106 (225)
T ss_dssp EEEEESC
T ss_pred EEEEeCC
Confidence 8888766
No 173
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.74 E-value=2.9e-08 Score=90.73 Aligned_cols=73 Identities=21% Similarity=0.216 Sum_probs=63.0
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
..++ +|||+|||+|..+..++.. ...|+++|+++.+++.+++++...+. + +.++++|+..++ ...+.||+|++
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~-~-~~~~~~d~~~~~-~~~~~fD~v~~ 100 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGV-K-ITTVQSNLADFD-IVADAWEGIVS 100 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHTC-C-EEEECCBTTTBS-CCTTTCSEEEE
T ss_pred CCCC-CEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCC-c-eEEEEcChhhcC-CCcCCccEEEE
Confidence 4567 9999999999999988875 46999999999999999999998887 3 889999998864 23578999997
No 174
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.74 E-value=3e-08 Score=95.94 Aligned_cols=80 Identities=18% Similarity=0.143 Sum_probs=68.1
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
+.++.+|||+|||+|..+..++.. +.+.|+++|+++.+++.+++++...++..++.++++|+...+....++||+|++
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 139 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA--GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISS 139 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH--TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEE
Confidence 457899999999999999998876 346999999999999999999999988667999999998764323578999998
Q ss_pred cC
Q 012998 411 DA 412 (451)
Q Consensus 411 D~ 412 (451)
.-
T Consensus 140 ~~ 141 (298)
T 1ri5_A 140 QF 141 (298)
T ss_dssp ES
T ss_pred Cc
Confidence 63
No 175
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.73 E-value=3.2e-08 Score=92.59 Aligned_cols=77 Identities=17% Similarity=0.208 Sum_probs=66.7
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
..++.+|||+|||+|..+..++...+ ...|+++|+++.+++.+++++...+ ++.++++|+..++.. ++||+|++
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~~--~~fD~v~~ 115 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYP-EATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDFE--EKYDMVVS 115 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCCC--SCEEEEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCCC--CCceEEEE
Confidence 56789999999999999999999863 5799999999999999999988766 389999999887643 78999998
Q ss_pred cCC
Q 012998 411 DAP 413 (451)
Q Consensus 411 D~P 413 (451)
...
T Consensus 116 ~~~ 118 (234)
T 3dtn_A 116 ALS 118 (234)
T ss_dssp ESC
T ss_pred eCc
Confidence 643
No 176
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.73 E-value=2.3e-08 Score=95.01 Aligned_cols=82 Identities=17% Similarity=0.189 Sum_probs=68.9
Q ss_pred hhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCC
Q 012998 324 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 403 (451)
Q Consensus 324 l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~ 403 (451)
.+...+.+.++.+|||+|||+|..+..++... ..+|+++|+++.+++.+++++... . +++++++|+..++ ...+
T Consensus 46 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~--~-~~~~~~~d~~~~~-~~~~ 119 (266)
T 3ujc_A 46 KILSDIELNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGN--N-KIIFEANDILTKE-FPEN 119 (266)
T ss_dssp HHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSC--T-TEEEEECCTTTCC-CCTT
T ss_pred HHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcC--C-CeEEEECccccCC-CCCC
Confidence 34455677889999999999999999999976 479999999999999999988765 3 4899999998864 3357
Q ss_pred CcCEEEEc
Q 012998 404 KCDKVLLD 411 (451)
Q Consensus 404 ~fD~VlvD 411 (451)
+||+|++.
T Consensus 120 ~fD~v~~~ 127 (266)
T 3ujc_A 120 NFDLIYSR 127 (266)
T ss_dssp CEEEEEEE
T ss_pred cEEEEeHH
Confidence 89999974
No 177
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.72 E-value=2.3e-08 Score=97.68 Aligned_cols=50 Identities=16% Similarity=0.199 Sum_probs=41.9
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQV 383 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~ 383 (451)
++.+|||+|||+|..+..++...+ ...|+|+|+++.+++.++++++..+.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~-~~~v~gvDis~~~i~~A~~~~~~~~~ 95 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWG-PSRMVGLDIDSRLIHSARQNIRHYLS 95 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTC-CSEEEEEESCHHHHHHHHHTC-----
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHhhhh
Confidence 688999999999999999999875 36999999999999999999887653
No 178
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.72 E-value=2.6e-08 Score=100.91 Aligned_cols=77 Identities=16% Similarity=0.298 Sum_probs=66.5
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEEc
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 411 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD 411 (451)
.+|.+|||+|||+|..++.+|+. +..+|+|||.++ +++.++++++.+|+.++|+++++|++++. .+++||+|+++
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~a--GA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~--lpe~~DvivsE 156 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQA--GARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVE--LPEQVDAIVSE 156 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCC--CSSCEEEEECC
T ss_pred cCCCEEEEeCCCccHHHHHHHHh--CCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeec--CCccccEEEee
Confidence 46899999999999999877765 456899999996 88999999999999999999999998875 34789999986
Q ss_pred CC
Q 012998 412 AP 413 (451)
Q Consensus 412 ~P 413 (451)
.-
T Consensus 157 ~~ 158 (376)
T 4hc4_A 157 WM 158 (376)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 179
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.71 E-value=1.8e-08 Score=99.28 Aligned_cols=82 Identities=11% Similarity=0.049 Sum_probs=67.2
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHH--cCC-CceEEEEcCccccccccCCCCcCEE
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKL--HQV-NSVIRTIHADLRTFADNSTVKCDKV 408 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~--~g~-~~~I~~~~~Da~~~~~~~~~~fD~V 408 (451)
..+.+|||+|||+|+.+..++... +..+|+++|+++.+++.+++++.. .++ ..+++++.+|+..+.....++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~I 172 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVI 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEE
Confidence 456899999999999999998763 357999999999999999999876 344 3459999999987543345789999
Q ss_pred EEcCCC
Q 012998 409 LLDAPC 414 (451)
Q Consensus 409 lvD~PC 414 (451)
++|+|.
T Consensus 173 i~d~~~ 178 (304)
T 2o07_A 173 ITDSSD 178 (304)
T ss_dssp EEECC-
T ss_pred EECCCC
Confidence 999985
No 180
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.71 E-value=3.1e-08 Score=105.11 Aligned_cols=105 Identities=17% Similarity=0.176 Sum_probs=83.4
Q ss_pred CceeeecchhhhhhhhhC----CCCCCeEEeecCCCchHHHHHHHHcC--CCceEEEEeCCHHHHHHHHHHHHHcCCC-c
Q 012998 313 GLCAVQDESAGLVVAVVD----PQPGQSIVDCCAAPGGKTLYMASCLS--GQGLVYAIDINKGRLRILNETAKLHQVN-S 385 (451)
Q Consensus 313 G~~~vQd~as~l~~~~l~----~~~g~~VLDlcagpG~kT~~la~~~~--~~g~V~AvDi~~~rl~~l~~~~~~~g~~-~ 385 (451)
|.|+--..-+.+++.++. +.++.+|+|.|||+|+..+.++..+. +...++|+|+++..+..++.|+...|+. +
T Consensus 197 G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~ 276 (542)
T 3lkd_A 197 GEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIE 276 (542)
T ss_dssp SSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGG
T ss_pred CeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcC
Confidence 444443445556667766 66889999999999999999988874 2468999999999999999999999984 2
Q ss_pred eEEEEcCccccc--cccCCCCcCEEEEcCCCCCc
Q 012998 386 VIRTIHADLRTF--ADNSTVKCDKVLLDAPCSGL 417 (451)
Q Consensus 386 ~I~~~~~Da~~~--~~~~~~~fD~VlvD~PCSg~ 417 (451)
.+.+.++|.... +.....+||+|+.+||.++.
T Consensus 277 ~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~ 310 (542)
T 3lkd_A 277 NQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAK 310 (542)
T ss_dssp GEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCC
T ss_pred ccceEecceecccccccccccccEEEecCCcCCc
Confidence 478899998765 33335789999999999854
No 181
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.70 E-value=3.1e-08 Score=103.73 Aligned_cols=81 Identities=12% Similarity=0.187 Sum_probs=69.3
Q ss_pred hhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCE
Q 012998 328 VVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDK 407 (451)
Q Consensus 328 ~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~ 407 (451)
.+...++.+|||+|||+|..++.+++. +..+|+|+|+++ +++.++++++.+|+.++|+++++|+.+++ ..++||+
T Consensus 153 ~l~~~~~~~VLDiGcGtG~la~~la~~--~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~--~~~~fD~ 227 (480)
T 3b3j_A 153 NHTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS--LPEQVDI 227 (480)
T ss_dssp TGGGTTTCEEEEESCSTTHHHHHHHHT--TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCC--CSSCEEE
T ss_pred hhhhcCCCEEEEecCcccHHHHHHHHc--CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCc--cCCCeEE
Confidence 344567899999999999999988874 456999999998 99999999999999767999999998764 2368999
Q ss_pred EEEcCC
Q 012998 408 VLLDAP 413 (451)
Q Consensus 408 VlvD~P 413 (451)
|+++++
T Consensus 228 Ivs~~~ 233 (480)
T 3b3j_A 228 IISEPM 233 (480)
T ss_dssp EECCCC
T ss_pred EEEeCc
Confidence 999877
No 182
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.70 E-value=2.2e-08 Score=97.22 Aligned_cols=81 Identities=10% Similarity=0.055 Sum_probs=66.9
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc--CC-CceEEEEcCccccccccCCCCcCEEE
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--QV-NSVIRTIHADLRTFADNSTVKCDKVL 409 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~--g~-~~~I~~~~~Da~~~~~~~~~~fD~Vl 409 (451)
.+.+|||+|||+|+.+..++... +..+|+++|+++.+++.+++++..+ ++ ..+++++.+|+..+.....++||+|+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHP-SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCT-TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCC-CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 46799999999999999888752 3579999999999999999998753 33 23599999999876443457899999
Q ss_pred EcCCC
Q 012998 410 LDAPC 414 (451)
Q Consensus 410 vD~PC 414 (451)
+|+|.
T Consensus 154 ~d~~~ 158 (275)
T 1iy9_A 154 VDSTE 158 (275)
T ss_dssp ESCSS
T ss_pred ECCCC
Confidence 99986
No 183
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.70 E-value=1.1e-08 Score=101.21 Aligned_cols=89 Identities=22% Similarity=0.306 Sum_probs=74.4
Q ss_pred hhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccC---
Q 012998 325 VVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS--- 401 (451)
Q Consensus 325 ~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~--- 401 (451)
++..|.++||+.++|+++|.||.|..+++.+++.|+|+|+|.++.+++.++ ++ . .++++++++++.++....
T Consensus 49 vl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL---~-~~Rv~lv~~nF~~l~~~L~~~ 123 (347)
T 3tka_A 49 AVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI---D-DPRFSIIHGPFSALGEYVAER 123 (347)
T ss_dssp HHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC---C-CTTEEEEESCGGGHHHHHHHT
T ss_pred HHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh---c-CCcEEEEeCCHHHHHHHHHhc
Confidence 345678899999999999999999999999988899999999999999884 33 2 356999999998875321
Q ss_pred --CCCcCEEEEcCCCCCcc
Q 012998 402 --TVKCDKVLLDAPCSGLG 418 (451)
Q Consensus 402 --~~~fD~VlvD~PCSg~G 418 (451)
.+++|.|++|-.||+.-
T Consensus 124 g~~~~vDgILfDLGVSS~Q 142 (347)
T 3tka_A 124 DLIGKIDGILLDLGVSSPQ 142 (347)
T ss_dssp TCTTCEEEEEEECSCCHHH
T ss_pred CCCCcccEEEECCccCHHH
Confidence 13699999999999754
No 184
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.70 E-value=4.2e-08 Score=94.08 Aligned_cols=78 Identities=13% Similarity=0.094 Sum_probs=61.7
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHH----------cC------CCceEEEEcCc
Q 012998 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKL----------HQ------VNSVIRTIHAD 393 (451)
Q Consensus 330 ~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~----------~g------~~~~I~~~~~D 393 (451)
.+.++.+|||+|||+|..+..+|+. +..|+|+|+|+.+++.++++... .+ ....|+++++|
T Consensus 65 ~~~~~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D 141 (252)
T 2gb4_A 65 KGQSGLRVFFPLCGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCS 141 (252)
T ss_dssp TTCCSCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESC
T ss_pred cCCCCCeEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECc
Confidence 3457899999999999999999986 35899999999999999876531 00 11248999999
Q ss_pred cccccccCCCCcCEEEE
Q 012998 394 LRTFADNSTVKCDKVLL 410 (451)
Q Consensus 394 a~~~~~~~~~~fD~Vlv 410 (451)
+..++....++||+|++
T Consensus 142 ~~~l~~~~~~~FD~V~~ 158 (252)
T 2gb4_A 142 IFDLPRANIGKFDRIWD 158 (252)
T ss_dssp TTTGGGGCCCCEEEEEE
T ss_pred cccCCcccCCCEEEEEE
Confidence 99886432378999995
No 185
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.70 E-value=4.9e-08 Score=88.62 Aligned_cols=77 Identities=22% Similarity=0.337 Sum_probs=58.9
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCC--------ceEEEEeCCHHHHHHHHHHHHHcCCCceEEEE-cCccccccc--
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQ--------GLVYAIDINKGRLRILNETAKLHQVNSVIRTI-HADLRTFAD-- 399 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~--------g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~-~~Da~~~~~-- 399 (451)
+.+|.+|||+|||+|..+..++..++.. ++|+++|+++.+ ++.+ ++++ .+|+.....
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~-~~~~~~~d~~~~~~~~ 87 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEG-ATFLCPADVTDPRTSQ 87 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTT-CEEECSCCTTSHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCC-CeEEEeccCCCHHHHH
Confidence 5679999999999999999999987653 799999999842 2343 7788 889765431
Q ss_pred -----cCCCCcCEEEEcCCCCCccc
Q 012998 400 -----NSTVKCDKVLLDAPCSGLGV 419 (451)
Q Consensus 400 -----~~~~~fD~VlvD~PCSg~G~ 419 (451)
...++||+|++|.++..+|.
T Consensus 88 ~~~~~~~~~~fD~V~~~~~~~~~~~ 112 (196)
T 2nyu_A 88 RILEVLPGRRADVILSDMAPNATGF 112 (196)
T ss_dssp HHHHHSGGGCEEEEEECCCCCCCSC
T ss_pred HHHHhcCCCCCcEEEeCCCCCCCCC
Confidence 11357999999986655553
No 186
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.70 E-value=3.6e-08 Score=96.00 Aligned_cols=91 Identities=16% Similarity=0.201 Sum_probs=70.7
Q ss_pred hhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc
Q 012998 321 SAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD 399 (451)
Q Consensus 321 as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~ 399 (451)
....++..+++.++++|||+|||+|..|..+++.... .++|+|+|+|+.+++.++++. . .+++++++|+..++.
T Consensus 30 i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~----~-~~v~~i~~D~~~~~~ 104 (279)
T 3uzu_A 30 VIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF----G-ELLELHAGDALTFDF 104 (279)
T ss_dssp HHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH----G-GGEEEEESCGGGCCG
T ss_pred HHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc----C-CCcEEEECChhcCCh
Confidence 3445667788899999999999999999999987543 356999999999999999983 2 348999999988652
Q ss_pred cC--C-C--CcCEEEEcCCCCC
Q 012998 400 NS--T-V--KCDKVLLDAPCSG 416 (451)
Q Consensus 400 ~~--~-~--~fD~VlvD~PCSg 416 (451)
.. . . ..+.|+.++|..-
T Consensus 105 ~~~~~~~~~~~~~vv~NlPY~i 126 (279)
T 3uzu_A 105 GSIARPGDEPSLRIIGNLPYNI 126 (279)
T ss_dssp GGGSCSSSSCCEEEEEECCHHH
T ss_pred hHhcccccCCceEEEEccCccc
Confidence 11 1 1 2357999999643
No 187
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.70 E-value=2.1e-08 Score=96.71 Aligned_cols=85 Identities=15% Similarity=0.019 Sum_probs=62.4
Q ss_pred hhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCC
Q 012998 323 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 402 (451)
Q Consensus 323 ~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~ 402 (451)
..+...+.+.+|.+|||+|||+|..+..++.. .+.|+|+|+|+.|++.+++++....+ .+.+...+.. ......
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~~~v--~~~~~~~~~~-~~~~~~ 108 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALADRCV--TIDLLDITAE-IPKELA 108 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSSSCC--EEEECCTTSC-CCGGGT
T ss_pred HHHHHhcCCCCcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHhccc--eeeeeecccc-cccccC
Confidence 34556678889999999999999999999986 47999999999999999999876522 1233222220 011124
Q ss_pred CCcCEEEEcCC
Q 012998 403 VKCDKVLLDAP 413 (451)
Q Consensus 403 ~~fD~VlvD~P 413 (451)
++||+|+++..
T Consensus 109 ~~fD~Vv~~~~ 119 (261)
T 3iv6_A 109 GHFDFVLNDRL 119 (261)
T ss_dssp TCCSEEEEESC
T ss_pred CCccEEEEhhh
Confidence 68999998643
No 188
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.70 E-value=3.5e-08 Score=100.15 Aligned_cols=84 Identities=15% Similarity=0.271 Sum_probs=69.7
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc-----C-CC-ceEEEEcCcccccc----
Q 012998 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH-----Q-VN-SVIRTIHADLRTFA---- 398 (451)
Q Consensus 330 ~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~-----g-~~-~~I~~~~~Da~~~~---- 398 (451)
++.++.+|||+|||+|..+..++...++.+.|+++|+++.+++.++++++.. | +. .++.++++|+..+.
T Consensus 80 ~~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~ 159 (383)
T 4fsd_A 80 GSLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEP 159 (383)
T ss_dssp GGGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBS
T ss_pred cCCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhccc
Confidence 3567899999999999999999998866789999999999999999998876 4 31 24899999998762
Q ss_pred -ccCCCCcCEEEEcCC
Q 012998 399 -DNSTVKCDKVLLDAP 413 (451)
Q Consensus 399 -~~~~~~fD~VlvD~P 413 (451)
+..+++||+|++...
T Consensus 160 ~~~~~~~fD~V~~~~~ 175 (383)
T 4fsd_A 160 EGVPDSSVDIVISNCV 175 (383)
T ss_dssp CCCCTTCEEEEEEESC
T ss_pred CCCCCCCEEEEEEccc
Confidence 233578999998643
No 189
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.69 E-value=3.7e-08 Score=94.33 Aligned_cols=77 Identities=18% Similarity=0.205 Sum_probs=65.6
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
+.++.+|||+|||+|..+..++.. + .+|+++|+++.+++.+++|++.+|+. +++.++|+.... ..++||+|++
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~-g--~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~~--~~~~fD~Vv~ 190 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKL-G--GKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAAL--PFGPFDLLVA 190 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-T--CEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHHG--GGCCEEEEEE
T ss_pred cCCCCEEEEecCCCcHHHHHHHHh-C--CeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhcC--cCCCCCEEEE
Confidence 467899999999999999988875 2 39999999999999999999999986 788999987642 2368999999
Q ss_pred cCCC
Q 012998 411 DAPC 414 (451)
Q Consensus 411 D~PC 414 (451)
+.+.
T Consensus 191 n~~~ 194 (254)
T 2nxc_A 191 NLYA 194 (254)
T ss_dssp ECCH
T ss_pred CCcH
Confidence 8754
No 190
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.69 E-value=5.1e-08 Score=90.37 Aligned_cols=76 Identities=20% Similarity=0.236 Sum_probs=64.7
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEEc
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 411 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD 411 (451)
.++.+|||+|||+|..+..++... .+|+++|+++.+++.++++++..+ . +++++++|+..++ ...++||+|++.
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~-~-~~~~~~~d~~~~~-~~~~~~D~v~~~ 110 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYG---FEVVGVDISEDMIRKAREYAKSRE-S-NVEFIVGDARKLS-FEDKTFDYVIFI 110 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTT-C-CCEEEECCTTSCC-SCTTCEEEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHhcC-C-CceEEECchhcCC-CCCCcEEEEEEc
Confidence 358899999999999999998862 399999999999999999999887 3 4889999998764 234689999988
Q ss_pred CC
Q 012998 412 AP 413 (451)
Q Consensus 412 ~P 413 (451)
.+
T Consensus 111 ~~ 112 (227)
T 1ve3_A 111 DS 112 (227)
T ss_dssp SC
T ss_pred Cc
Confidence 66
No 191
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.67 E-value=4.2e-08 Score=92.96 Aligned_cols=84 Identities=20% Similarity=0.198 Sum_probs=68.0
Q ss_pred chhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc
Q 012998 320 ESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD 399 (451)
Q Consensus 320 ~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~ 399 (451)
.....+...+.+.++.+|||+|||+|..+..++...+ .+.|+++|+++.+++.++++ ..+ +.++.+|+..++
T Consensus 20 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~-----~~~-~~~~~~d~~~~~- 91 (259)
T 2p35_A 20 RPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYG-VNVITGIDSDDDMLEKAADR-----LPN-TNFGKADLATWK- 91 (259)
T ss_dssp HHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHC-TTSEEEEESCHHHHHHHHHH-----STT-SEEEECCTTTCC-
T ss_pred HHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHh-----CCC-cEEEECChhhcC-
Confidence 3334445556677889999999999999999998864 57999999999999999887 233 788999998876
Q ss_pred cCCCCcCEEEEcC
Q 012998 400 NSTVKCDKVLLDA 412 (451)
Q Consensus 400 ~~~~~fD~VlvD~ 412 (451)
..++||+|++..
T Consensus 92 -~~~~fD~v~~~~ 103 (259)
T 2p35_A 92 -PAQKADLLYANA 103 (259)
T ss_dssp -CSSCEEEEEEES
T ss_pred -ccCCcCEEEEeC
Confidence 357899999854
No 192
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.67 E-value=6.8e-08 Score=88.85 Aligned_cols=72 Identities=14% Similarity=0.161 Sum_probs=62.0
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEE
Q 012998 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 409 (451)
Q Consensus 330 ~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vl 409 (451)
...++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++ .|..+ +.++++|+..+ ...++||+|+
T Consensus 43 ~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~----~~~~~-~~~~~~d~~~~--~~~~~~D~v~ 112 (218)
T 3ou2_A 43 AGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGR----HGLDN-VEFRQQDLFDW--TPDRQWDAVF 112 (218)
T ss_dssp TTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGG----GCCTT-EEEEECCTTSC--CCSSCEEEEE
T ss_pred cCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHh----cCCCC-eEEEecccccC--CCCCceeEEE
Confidence 4677889999999999999999987 4699999999999999887 56665 89999999887 3457899999
Q ss_pred Ec
Q 012998 410 LD 411 (451)
Q Consensus 410 vD 411 (451)
+.
T Consensus 113 ~~ 114 (218)
T 3ou2_A 113 FA 114 (218)
T ss_dssp EE
T ss_pred Ee
Confidence 74
No 193
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.67 E-value=6.2e-08 Score=99.85 Aligned_cols=88 Identities=13% Similarity=0.117 Sum_probs=68.3
Q ss_pred hhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHH-------HHHHHHcCCC-ceEEEEcCccccc
Q 012998 326 VAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRIL-------NETAKLHQVN-SVIRTIHADLRTF 397 (451)
Q Consensus 326 ~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l-------~~~~~~~g~~-~~I~~~~~Da~~~ 397 (451)
...+.+.+|++|||+|||+|..++.+|...+ ..+|+|+|+++.+++.+ +++++..|+. .+|+++++|....
T Consensus 235 l~~l~l~~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~ 313 (433)
T 1u2z_A 235 YQQCQLKKGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVD 313 (433)
T ss_dssp HHHTTCCTTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTT
T ss_pred HHhcCCCCCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccc
Confidence 3556788999999999999999999999764 46899999999999888 9999999942 3488988765421
Q ss_pred c-c--cCCCCcCEEEEcCCC
Q 012998 398 A-D--NSTVKCDKVLLDAPC 414 (451)
Q Consensus 398 ~-~--~~~~~fD~VlvD~PC 414 (451)
. . ...+.||+|+++..+
T Consensus 314 ~~~~~~~~~~FDvIvvn~~l 333 (433)
T 1u2z_A 314 NNRVAELIPQCDVILVNNFL 333 (433)
T ss_dssp CHHHHHHGGGCSEEEECCTT
T ss_pred ccccccccCCCCEEEEeCcc
Confidence 0 0 112579999986443
No 194
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.67 E-value=4.4e-09 Score=103.79 Aligned_cols=78 Identities=21% Similarity=0.229 Sum_probs=58.7
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeC----CHHHHHHHHHHHHHcCCCceEEEEcC-ccccccccCCCCc
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDI----NKGRLRILNETAKLHQVNSVIRTIHA-DLRTFADNSTVKC 405 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi----~~~rl~~l~~~~~~~g~~~~I~~~~~-Da~~~~~~~~~~f 405 (451)
+++|.+|||+|||||++|..+++. +.|+|+|+ ++.+++.+ ..+..|.+ .|+++++ |+..++ .++|
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~--~~~~~~~~-~v~~~~~~D~~~l~---~~~f 149 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPI--PMSTYGWN-LVRLQSGVDVFFIP---PERC 149 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCC--CCCSTTGG-GEEEECSCCTTTSC---CCCC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHH--HhhhcCCC-CeEEEeccccccCC---cCCC
Confidence 467899999999999999999875 68999999 55443211 12223333 4899999 988764 3689
Q ss_pred CEEEEcCCCCCccc
Q 012998 406 DKVLLDAPCSGLGV 419 (451)
Q Consensus 406 D~VlvD~PCSg~G~ 419 (451)
|+|++|.+|+ +|.
T Consensus 150 D~V~sd~~~~-~g~ 162 (305)
T 2p41_A 150 DTLLCDIGES-SPN 162 (305)
T ss_dssp SEEEECCCCC-CSS
T ss_pred CEEEECCccc-cCc
Confidence 9999999997 664
No 195
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.66 E-value=7.9e-08 Score=90.90 Aligned_cols=74 Identities=22% Similarity=0.258 Sum_probs=63.9
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEE
Q 012998 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 409 (451)
Q Consensus 330 ~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vl 409 (451)
...++.+|||+|||+|..+..++.. ...|+++|+++.+++.+++++...+.. +.++++|+..++. .++||+|+
T Consensus 38 ~~~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~--v~~~~~d~~~~~~--~~~fD~v~ 110 (252)
T 1wzn_A 38 AKREVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNLK--IEFLQGDVLEIAF--KNEFDAVT 110 (252)
T ss_dssp CSSCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCC--CEEEESCGGGCCC--CSCEEEEE
T ss_pred cccCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCCc--eEEEECChhhccc--CCCccEEE
Confidence 3457889999999999999999885 468999999999999999999988873 7899999988652 36899999
Q ss_pred E
Q 012998 410 L 410 (451)
Q Consensus 410 v 410 (451)
+
T Consensus 111 ~ 111 (252)
T 1wzn_A 111 M 111 (252)
T ss_dssp E
T ss_pred E
Confidence 6
No 196
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.66 E-value=4.9e-08 Score=91.34 Aligned_cols=72 Identities=7% Similarity=0.031 Sum_probs=59.6
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccC-CCCcCEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS-TVKCDKVL 409 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~-~~~fD~Vl 409 (451)
+.++.+|||+|||+|..+..++.. ..+|+++|+++.+++.++++ ..+ ++++++|+....+.. +++||+|+
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-----~~~-~~~~~~d~~~~~~~~~~~~fD~v~ 116 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARAN-----APH-ADVYEWNGKGELPAGLGAPFGLIV 116 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHH-----CTT-SEEEECCSCSSCCTTCCCCEEEEE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHh-----CCC-ceEEEcchhhccCCcCCCCEEEEE
Confidence 357899999999999999999886 46999999999999999988 333 789999995433333 57899999
Q ss_pred Ec
Q 012998 410 LD 411 (451)
Q Consensus 410 vD 411 (451)
+.
T Consensus 117 ~~ 118 (226)
T 3m33_A 117 SR 118 (226)
T ss_dssp EE
T ss_pred eC
Confidence 86
No 197
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.66 E-value=1.7e-08 Score=107.12 Aligned_cols=105 Identities=16% Similarity=0.202 Sum_probs=84.2
Q ss_pred cCceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCC--------------CceEEEEeCCHHHHHHHHHH
Q 012998 312 EGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSG--------------QGLVYAIDINKGRLRILNET 377 (451)
Q Consensus 312 ~G~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~--------------~g~V~AvDi~~~rl~~l~~~ 377 (451)
.|.|+--..-+.+++.++.+.++ +|||.|||+|++.+.++..+.. ...++|+|+++..+..++.|
T Consensus 224 ~G~fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~N 302 (544)
T 3khk_A 224 GGQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMN 302 (544)
T ss_dssp STTTCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHH
T ss_pred CCeEeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHH
Confidence 45655555667788888898877 9999999999998888765431 35799999999999999999
Q ss_pred HHHcCCCceEEEEcCccccccccCCCCcCEEEEcCCCCCc
Q 012998 378 AKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGL 417 (451)
Q Consensus 378 ~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD~PCSg~ 417 (451)
+...|+...+.+.++|....+.....+||+|+.+||.+..
T Consensus 303 l~l~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~ 342 (544)
T 3khk_A 303 MVIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMK 342 (544)
T ss_dssp HHHTTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCC
T ss_pred HHHhCCCcccceeccchhcCcccccccccEEEECCCcCCc
Confidence 9999987655558889776543335789999999999864
No 198
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.65 E-value=2.3e-08 Score=99.40 Aligned_cols=82 Identities=12% Similarity=0.139 Sum_probs=66.8
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc--CC-CceEEEEcCccccccccCCCCcCEE
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--QV-NSVIRTIHADLRTFADNSTVKCDKV 408 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~--g~-~~~I~~~~~Da~~~~~~~~~~fD~V 408 (451)
.++.+|||+|||+|+.+..++... +..+|+++|+++.+++.+++++... ++ ..+++++.+|+..+.....++||+|
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvI 193 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 193 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEE
Confidence 356899999999999999998753 3579999999999999999998763 33 2359999999987643335789999
Q ss_pred EEcCCC
Q 012998 409 LLDAPC 414 (451)
Q Consensus 409 lvD~PC 414 (451)
++|++.
T Consensus 194 i~d~~~ 199 (321)
T 2pt6_A 194 IVDSSD 199 (321)
T ss_dssp EEECCC
T ss_pred EECCcC
Confidence 999863
No 199
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.65 E-value=2.5e-08 Score=98.74 Aligned_cols=82 Identities=11% Similarity=0.050 Sum_probs=67.3
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc--CC-CceEEEEcCccccccccCCCCcCEE
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--QV-NSVIRTIHADLRTFADNSTVKCDKV 408 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~--g~-~~~I~~~~~Da~~~~~~~~~~fD~V 408 (451)
..+.+|||+|||+|+.+..++... +.++|+++|+++.+++.+++++... |+ ..+++++.+|+..+.....++||+|
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 185 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVI 185 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEE
Confidence 346799999999999999998753 3579999999999999999998765 44 3459999999987643345789999
Q ss_pred EEcCCC
Q 012998 409 LLDAPC 414 (451)
Q Consensus 409 lvD~PC 414 (451)
++|++.
T Consensus 186 i~d~~~ 191 (314)
T 2b2c_A 186 ITDSSD 191 (314)
T ss_dssp EECCC-
T ss_pred EEcCCC
Confidence 999974
No 200
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.64 E-value=7e-08 Score=91.52 Aligned_cols=76 Identities=12% Similarity=0.134 Sum_probs=63.9
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEE
Q 012998 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 409 (451)
Q Consensus 330 ~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vl 409 (451)
.+.++.+|||+|||+|..+..++.. .+.|+++|+++.+++.+++++ ..+..+ +.++.+|+..++ ..+++||+|+
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-~~~~~~-~~~~~~d~~~~~-~~~~~fD~v~ 109 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKI-AGVDRK-VQVVQADARAIP-LPDESVHGVI 109 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHT-TTSCTT-EEEEESCTTSCC-SCTTCEEEEE
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHh-hccCCc-eEEEEcccccCC-CCCCCeeEEE
Confidence 5678899999999999999999875 479999999999999999998 334444 899999998765 3357899999
Q ss_pred Ec
Q 012998 410 LD 411 (451)
Q Consensus 410 vD 411 (451)
+.
T Consensus 110 ~~ 111 (263)
T 2yqz_A 110 VV 111 (263)
T ss_dssp EE
T ss_pred EC
Confidence 84
No 201
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.64 E-value=4e-08 Score=94.11 Aligned_cols=92 Identities=16% Similarity=0.224 Sum_probs=71.1
Q ss_pred eecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccc
Q 012998 317 VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT 396 (451)
Q Consensus 317 vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~ 396 (451)
....-...++..+++.++++|||+|||+|..|..+++. +.++|+|+|+|+.+++.++++ +.. +++++++|+..
T Consensus 15 ~d~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~--~~~~v~avEid~~~~~~~~~~----~~~-~v~~i~~D~~~ 87 (249)
T 3ftd_A 15 VSEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH--PLKKLYVIELDREMVENLKSI----GDE-RLEVINEDASK 87 (249)
T ss_dssp ECHHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS--CCSEEEEECCCHHHHHHHTTS----CCT-TEEEECSCTTT
T ss_pred CCHHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc--CCCeEEEEECCHHHHHHHHhc----cCC-CeEEEEcchhh
Confidence 33334455667778889999999999999999999875 347999999999999999887 233 48999999988
Q ss_pred ccccC-CCCcCEEEEcCCCCC
Q 012998 397 FADNS-TVKCDKVLLDAPCSG 416 (451)
Q Consensus 397 ~~~~~-~~~fD~VlvD~PCSg 416 (451)
++... ...| .|+.++|..-
T Consensus 88 ~~~~~~~~~~-~vv~NlPy~i 107 (249)
T 3ftd_A 88 FPFCSLGKEL-KVVGNLPYNV 107 (249)
T ss_dssp CCGGGSCSSE-EEEEECCTTT
T ss_pred CChhHccCCc-EEEEECchhc
Confidence 64321 1233 8999999854
No 202
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.63 E-value=4.6e-08 Score=97.73 Aligned_cols=82 Identities=13% Similarity=0.100 Sum_probs=67.1
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc--CC-CceEEEEcCcccccccc-CCCCcC
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--QV-NSVIRTIHADLRTFADN-STVKCD 406 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~--g~-~~~I~~~~~Da~~~~~~-~~~~fD 406 (451)
...+.+|||+|||+|+.+..++... +..+|+++|+++.+++.+++++..+ |+ ..+++++.+|+..+... ..++||
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fD 196 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYD 196 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCcc
Confidence 3456899999999999999998763 3579999999999999999999864 44 23599999999876432 246899
Q ss_pred EEEEcCC
Q 012998 407 KVLLDAP 413 (451)
Q Consensus 407 ~VlvD~P 413 (451)
+|++|++
T Consensus 197 lIi~d~~ 203 (334)
T 1xj5_A 197 AVIVDSS 203 (334)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999986
No 203
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.63 E-value=4.6e-08 Score=92.20 Aligned_cols=76 Identities=18% Similarity=0.126 Sum_probs=64.1
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEEc
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 411 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD 411 (451)
.++.+|||+|||+|..+..++... ...|+++|+++.+++.+++++...+.. ++.++.+|+..++. ..++||+|+++
T Consensus 78 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~-~~~~fD~v~~~ 153 (241)
T 2ex4_A 78 TGTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKR-VRNYFCCGLQDFTP-EPDSYDVIWIQ 153 (241)
T ss_dssp CCCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGG-EEEEEECCGGGCCC-CSSCEEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCc-eEEEEEcChhhcCC-CCCCEEEEEEc
Confidence 368899999999999999888763 469999999999999999999887643 48899999887653 34689999976
No 204
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.62 E-value=3.4e-08 Score=91.51 Aligned_cols=83 Identities=14% Similarity=0.163 Sum_probs=64.6
Q ss_pred hhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHH----HHHHcCCCceEEEEcCccccccccCC
Q 012998 327 AVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNE----TAKLHQVNSVIRTIHADLRTFADNST 402 (451)
Q Consensus 327 ~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~----~~~~~g~~~~I~~~~~Da~~~~~~~~ 402 (451)
..+.+.++.+|||+|||+|..+..++... +.++|+|+|+++.+++.+.+ +....++++ ++++++|+.+++. ..
T Consensus 21 ~~l~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~-v~~~~~d~~~l~~-~~ 97 (218)
T 3mq2_A 21 EQLRSQYDDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKAAAKPAKGGLPN-LLYLWATAERLPP-LS 97 (218)
T ss_dssp HHHHTTSSEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTT-EEEEECCSTTCCS-CC
T ss_pred HHhhccCCCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCc-eEEEecchhhCCC-CC
Confidence 44567889999999999999999999974 35899999999998886433 444567775 8999999988753 33
Q ss_pred CCcCEEEEcCC
Q 012998 403 VKCDKVLLDAP 413 (451)
Q Consensus 403 ~~fD~VlvD~P 413 (451)
+. |.|++..+
T Consensus 98 ~~-d~v~~~~~ 107 (218)
T 3mq2_A 98 GV-GELHVLMP 107 (218)
T ss_dssp CE-EEEEEESC
T ss_pred CC-CEEEEEcc
Confidence 44 77776554
No 205
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.62 E-value=6.1e-08 Score=94.51 Aligned_cols=80 Identities=15% Similarity=0.222 Sum_probs=65.8
Q ss_pred hhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC--ceEEEEcCccccccccCC
Q 012998 325 VVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN--SVIRTIHADLRTFADNST 402 (451)
Q Consensus 325 ~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~--~~I~~~~~Da~~~~~~~~ 402 (451)
+...+.+.++ +|||+|||+|..+..++.. ...|+++|+++.+++.+++++...++. .+++++++|+..++. .
T Consensus 75 ~~~~~~~~~~-~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~--~ 148 (299)
T 3g2m_A 75 FATRTGPVSG-PVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL--D 148 (299)
T ss_dssp HHHHHCCCCS-CEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC--S
T ss_pred HHHhhCCCCC-cEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc--C
Confidence 3344454444 9999999999999999886 468999999999999999999988752 348999999998763 5
Q ss_pred CCcCEEEE
Q 012998 403 VKCDKVLL 410 (451)
Q Consensus 403 ~~fD~Vlv 410 (451)
++||.|++
T Consensus 149 ~~fD~v~~ 156 (299)
T 3g2m_A 149 KRFGTVVI 156 (299)
T ss_dssp CCEEEEEE
T ss_pred CCcCEEEE
Confidence 78999986
No 206
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.62 E-value=1e-07 Score=88.53 Aligned_cols=78 Identities=22% Similarity=0.214 Sum_probs=66.5
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC----ceEEEEcCccccccccCCCCcC
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN----SVIRTIHADLRTFADNSTVKCD 406 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~----~~I~~~~~Da~~~~~~~~~~fD 406 (451)
++++.+|||+|||+|..+..++.. ...|+++|+++.+++.+++++...++. +++.++.+|+..++ ...++||
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D 103 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS-FHDSSFD 103 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC-SCTTCEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC-CCCCcee
Confidence 347889999999999999999887 469999999999999999999988873 34889999998765 2357899
Q ss_pred EEEEcC
Q 012998 407 KVLLDA 412 (451)
Q Consensus 407 ~VlvD~ 412 (451)
+|++..
T Consensus 104 ~v~~~~ 109 (235)
T 3sm3_A 104 FAVMQA 109 (235)
T ss_dssp EEEEES
T ss_pred EEEEcc
Confidence 999853
No 207
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.61 E-value=1.1e-07 Score=89.98 Aligned_cols=80 Identities=16% Similarity=0.171 Sum_probs=65.3
Q ss_pred hhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCc
Q 012998 326 VAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKC 405 (451)
Q Consensus 326 ~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~f 405 (451)
...+...++.+|||+|||+|..+..++.. +...|+++|+++.+++.+++++. . .++.++.+|+..++ ...++|
T Consensus 37 ~~~~~~~~~~~vLD~GcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~---~-~~~~~~~~d~~~~~-~~~~~f 109 (253)
T 3g5l_A 37 KKMLPDFNQKTVLDLGCGFGWHCIYAAEH--GAKKVLGIDLSERMLTEAKRKTT---S-PVVCYEQKAIEDIA-IEPDAY 109 (253)
T ss_dssp HTTCCCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHCC---C-TTEEEEECCGGGCC-CCTTCE
T ss_pred HHhhhccCCCEEEEECCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhhc---c-CCeEEEEcchhhCC-CCCCCe
Confidence 34556668899999999999999999886 22499999999999999998876 2 34899999998865 335789
Q ss_pred CEEEEcC
Q 012998 406 DKVLLDA 412 (451)
Q Consensus 406 D~VlvD~ 412 (451)
|+|++.-
T Consensus 110 D~v~~~~ 116 (253)
T 3g5l_A 110 NVVLSSL 116 (253)
T ss_dssp EEEEEES
T ss_pred EEEEEch
Confidence 9999853
No 208
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.60 E-value=7.4e-08 Score=92.90 Aligned_cols=81 Identities=22% Similarity=0.236 Sum_probs=66.1
Q ss_pred hhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc
Q 012998 321 SAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN 400 (451)
Q Consensus 321 as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~ 400 (451)
....+...+.+.++.+|||+|||+|..+..++. ..+.|+++|+++.+++.+++++ .+ +.++.+|+..++.
T Consensus 45 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~-----~~-~~~~~~d~~~~~~- 114 (279)
T 3ccf_A 45 YGEDLLQLLNPQPGEFILDLGCGTGQLTEKIAQ---SGAEVLGTDNAATMIEKARQNY-----PH-LHFDVADARNFRV- 114 (279)
T ss_dssp SCCHHHHHHCCCTTCEEEEETCTTSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHC-----TT-SCEEECCTTTCCC-
T ss_pred HHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHhhC-----CC-CEEEECChhhCCc-
Confidence 334445667788899999999999999999988 3579999999999999998876 33 6788899988653
Q ss_pred CCCCcCEEEEcC
Q 012998 401 STVKCDKVLLDA 412 (451)
Q Consensus 401 ~~~~fD~VlvD~ 412 (451)
+++||+|++..
T Consensus 115 -~~~fD~v~~~~ 125 (279)
T 3ccf_A 115 -DKPLDAVFSNA 125 (279)
T ss_dssp -SSCEEEEEEES
T ss_pred -CCCcCEEEEcc
Confidence 47899999753
No 209
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.60 E-value=9.9e-08 Score=92.69 Aligned_cols=82 Identities=16% Similarity=0.147 Sum_probs=57.7
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeC-CHHHHHHHHHHH-----HHcCCC----ceEEEEcCcccc----
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDI-NKGRLRILNETA-----KLHQVN----SVIRTIHADLRT---- 396 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi-~~~rl~~l~~~~-----~~~g~~----~~I~~~~~Da~~---- 396 (451)
..+|.+|||+|||+|..++.++.. +.++|+++|+ ++.+++.+++|+ +..|+. +++.+...|..+
T Consensus 77 ~~~~~~vLDlG~G~G~~~~~~a~~--~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 154 (281)
T 3bzb_A 77 LIAGKTVCELGAGAGLVSIVAFLA--GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDS 154 (281)
T ss_dssp GTTTCEEEETTCTTSHHHHHHHHT--TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHH
T ss_pred hcCCCeEEEecccccHHHHHHHHc--CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHH
Confidence 357889999999999999988875 3459999999 899999999999 666664 247777544332
Q ss_pred cccc-CCCCcCEEEE-cCCC
Q 012998 397 FADN-STVKCDKVLL-DAPC 414 (451)
Q Consensus 397 ~~~~-~~~~fD~Vlv-D~PC 414 (451)
+... ..++||+|++ |+..
T Consensus 155 ~~~~~~~~~fD~Ii~~dvl~ 174 (281)
T 3bzb_A 155 LQRCTGLQRFQVVLLADLLS 174 (281)
T ss_dssp HHHHHSCSSBSEEEEESCCS
T ss_pred HHhhccCCCCCEEEEeCccc
Confidence 2110 2468999987 7654
No 210
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.60 E-value=7.8e-08 Score=94.66 Aligned_cols=82 Identities=11% Similarity=0.043 Sum_probs=65.9
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc---CCCceEEEEcCcccccccc-CCCCcCE
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH---QVNSVIRTIHADLRTFADN-STVKCDK 407 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~---g~~~~I~~~~~Da~~~~~~-~~~~fD~ 407 (451)
.++.+|||+|||+|+.+..++.. .+..+|+++|+++.+++.+++++... ....+++++.+|+..+... ..++||+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRH-GTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTC-TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 45789999999999999999875 33579999999999999999988532 1223589999999887643 3578999
Q ss_pred EEEcCCC
Q 012998 408 VLLDAPC 414 (451)
Q Consensus 408 VlvD~PC 414 (451)
|++|++.
T Consensus 173 Ii~d~~~ 179 (304)
T 3bwc_A 173 VIIDTTD 179 (304)
T ss_dssp EEEECC-
T ss_pred EEECCCC
Confidence 9999875
No 211
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.60 E-value=6.7e-08 Score=94.17 Aligned_cols=82 Identities=12% Similarity=0.153 Sum_probs=67.1
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcC--C-CceEEEEcCccccccccCCCCcCEE
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQ--V-NSVIRTIHADLRTFADNSTVKCDKV 408 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g--~-~~~I~~~~~Da~~~~~~~~~~fD~V 408 (451)
.++.+|||+|||+|+.+..++.. .+..+|+++|+++.+++.+++++...+ + ..+++++.+|+..+.....++||+|
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKY-KSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 155 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEE
Confidence 45689999999999999999865 335799999999999999999987653 2 2358999999987654335789999
Q ss_pred EEcCCC
Q 012998 409 LLDAPC 414 (451)
Q Consensus 409 lvD~PC 414 (451)
++|++.
T Consensus 156 i~d~~~ 161 (283)
T 2i7c_A 156 IVDSSD 161 (283)
T ss_dssp EEECCC
T ss_pred EEcCCC
Confidence 999874
No 212
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.60 E-value=5.4e-08 Score=89.99 Aligned_cols=76 Identities=14% Similarity=0.131 Sum_probs=63.5
Q ss_pred hhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcC
Q 012998 327 AVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCD 406 (451)
Q Consensus 327 ~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD 406 (451)
..+.+.++.+|||+|||+|..+..++.. ...|+++|+++.+++.+++++. . ++.++++|+..++.. ++||
T Consensus 39 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~----~-~~~~~~~d~~~~~~~--~~fD 108 (220)
T 3hnr_A 39 EDVVNKSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP----K-EFSITEGDFLSFEVP--TSID 108 (220)
T ss_dssp HHHHHTCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC----T-TCCEESCCSSSCCCC--SCCS
T ss_pred HHhhccCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC----C-ceEEEeCChhhcCCC--CCeE
Confidence 3444568899999999999999999886 4799999999999999998876 2 378899999887632 7899
Q ss_pred EEEEcC
Q 012998 407 KVLLDA 412 (451)
Q Consensus 407 ~VlvD~ 412 (451)
+|++..
T Consensus 109 ~v~~~~ 114 (220)
T 3hnr_A 109 TIVSTY 114 (220)
T ss_dssp EEEEES
T ss_pred EEEECc
Confidence 999863
No 213
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.58 E-value=1.4e-07 Score=89.05 Aligned_cols=79 Identities=18% Similarity=0.103 Sum_probs=65.4
Q ss_pred hhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcC
Q 012998 327 AVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCD 406 (451)
Q Consensus 327 ~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD 406 (451)
..+...++.+|||+|||+|..+..++... ...|+++|+++.+++.+++++... . ++.++++|+..++ ...++||
T Consensus 87 ~~l~~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~--~-~~~~~~~d~~~~~-~~~~~fD 160 (254)
T 1xtp_A 87 ASLPGHGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGM--P-VGKFILASMETAT-LPPNTYD 160 (254)
T ss_dssp HTSTTCCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTS--S-EEEEEESCGGGCC-CCSSCEE
T ss_pred HhhcccCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccC--C-ceEEEEccHHHCC-CCCCCeE
Confidence 34456678999999999999999998874 468999999999999999998765 3 4899999998865 2357899
Q ss_pred EEEEc
Q 012998 407 KVLLD 411 (451)
Q Consensus 407 ~VlvD 411 (451)
+|++.
T Consensus 161 ~v~~~ 165 (254)
T 1xtp_A 161 LIVIQ 165 (254)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99973
No 214
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.57 E-value=8.6e-08 Score=94.82 Aligned_cols=83 Identities=10% Similarity=0.105 Sum_probs=67.3
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc--C-C-CceEEEEcCccccccccCCCCcCE
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--Q-V-NSVIRTIHADLRTFADNSTVKCDK 407 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~--g-~-~~~I~~~~~Da~~~~~~~~~~fD~ 407 (451)
..+.+|||+|||+|+.+..++... +..+|+++|+++.+++.+++++... | + ..+++++.+|+..+.....++||+
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDV 154 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccE
Confidence 346799999999999999998753 3579999999999999999998762 2 2 235999999998864334578999
Q ss_pred EEEcCCCC
Q 012998 408 VLLDAPCS 415 (451)
Q Consensus 408 VlvD~PCS 415 (451)
|++|++..
T Consensus 155 Ii~d~~~~ 162 (314)
T 1uir_A 155 VIIDLTDP 162 (314)
T ss_dssp EEEECCCC
T ss_pred EEECCCCc
Confidence 99998753
No 215
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.57 E-value=1.1e-07 Score=87.02 Aligned_cols=77 Identities=14% Similarity=0.088 Sum_probs=63.7
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEEc
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 411 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD 411 (451)
.++.+|||+|||+|..+..++.. + ...|+++|+++.+++.+++++.. .. ++.++++|+..++ ...++||+|++.
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~-~-~~~v~~~D~s~~~~~~a~~~~~~--~~-~i~~~~~d~~~~~-~~~~~fD~v~~~ 114 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLG-G-FPNVTSVDYSSVVVAAMQACYAH--VP-QLRWETMDVRKLD-FPSASFDVVLEK 114 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHT-T-CCCEEEEESCHHHHHHHHHHTTT--CT-TCEEEECCTTSCC-SCSSCEEEEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhccc--CC-CcEEEEcchhcCC-CCCCcccEEEEC
Confidence 67889999999999999999886 2 23899999999999999999875 23 3788999998764 335789999987
Q ss_pred CCC
Q 012998 412 APC 414 (451)
Q Consensus 412 ~PC 414 (451)
.+.
T Consensus 115 ~~~ 117 (215)
T 2pxx_A 115 GTL 117 (215)
T ss_dssp SHH
T ss_pred cch
Confidence 664
No 216
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.57 E-value=4.8e-08 Score=91.60 Aligned_cols=73 Identities=21% Similarity=0.133 Sum_probs=62.4
Q ss_pred CCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEEc
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 411 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD 411 (451)
+.+|||+|||+|..+..++. ....|+++|+++.+++.+++++...+...+++++++|+..++. .++||+|++.
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~fD~v~~~ 139 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS---PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP--TELFDLIFDY 139 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB---TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC--SSCEEEEEEE
T ss_pred CCCEEEeCCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC--CCCeeEEEEC
Confidence 45999999999999998865 3578999999999999999999887665569999999988753 4689999974
No 217
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.56 E-value=1.1e-07 Score=103.98 Aligned_cols=84 Identities=12% Similarity=0.116 Sum_probs=68.9
Q ss_pred hhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHH------cCCCceEEEEcCcccccc
Q 012998 325 VVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKL------HQVNSVIRTIHADLRTFA 398 (451)
Q Consensus 325 ~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~------~g~~~~I~~~~~Da~~~~ 398 (451)
+...+...++.+|||+|||+|..+..++...++...|+|+|+++.+++.++++++. .|+.+ |+++++|+..++
T Consensus 713 LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~n-VefiqGDa~dLp 791 (950)
T 3htx_A 713 ALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKS-ATLYDGSILEFD 791 (950)
T ss_dssp HHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSE-EEEEESCTTSCC
T ss_pred HHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCc-eEEEECchHhCC
Confidence 44555666899999999999999999988753447999999999999999997764 36664 999999998876
Q ss_pred ccCCCCcCEEEE
Q 012998 399 DNSTVKCDKVLL 410 (451)
Q Consensus 399 ~~~~~~fD~Vlv 410 (451)
. ..+.||+|++
T Consensus 792 ~-~d~sFDlVV~ 802 (950)
T 3htx_A 792 S-RLHDVDIGTC 802 (950)
T ss_dssp T-TSCSCCEEEE
T ss_pred c-ccCCeeEEEE
Confidence 4 3578999987
No 218
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.55 E-value=6.8e-08 Score=92.40 Aligned_cols=81 Identities=16% Similarity=0.169 Sum_probs=65.0
Q ss_pred hhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccC
Q 012998 322 AGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS 401 (451)
Q Consensus 322 s~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~ 401 (451)
...+...+.+.++.+|||+|||+|..+..++. ..++|+++|+++.+++.++++. + +.++++|+..++ ..
T Consensus 23 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~------~-~~~~~~d~~~~~-~~ 91 (261)
T 3ege_A 23 VNAIINLLNLPKGSVIADIGAGTGGYSVALAN---QGLFVYAVEPSIVMRQQAVVHP------Q-VEWFTGYAENLA-LP 91 (261)
T ss_dssp HHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT---TTCEEEEECSCHHHHHSSCCCT------T-EEEECCCTTSCC-SC
T ss_pred HHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcc------C-CEEEECchhhCC-CC
Confidence 34455666778899999999999999999987 3579999999999998766544 3 889999998865 33
Q ss_pred CCCcCEEEEcCC
Q 012998 402 TVKCDKVLLDAP 413 (451)
Q Consensus 402 ~~~fD~VlvD~P 413 (451)
+++||.|++...
T Consensus 92 ~~~fD~v~~~~~ 103 (261)
T 3ege_A 92 DKSVDGVISILA 103 (261)
T ss_dssp TTCBSEEEEESC
T ss_pred CCCEeEEEEcch
Confidence 578999998543
No 219
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.54 E-value=1.6e-07 Score=87.84 Aligned_cols=73 Identities=14% Similarity=0.088 Sum_probs=63.5
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEEcC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDA 412 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD~ 412 (451)
++.+|||+|||+|..+..++.. ...|+++|+++.+++.+++++...+. ++.++++|+..++. .++||+|++..
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~--~~~fD~v~~~~ 109 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLNI--NRKFDLITCCL 109 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCCC--SCCEEEEEECT
T ss_pred CCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCCc--cCCceEEEEcC
Confidence 7889999999999999999876 36899999999999999999998887 37899999988753 27899999753
No 220
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.54 E-value=1.9e-07 Score=87.37 Aligned_cols=82 Identities=18% Similarity=0.118 Sum_probs=66.1
Q ss_pred hhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCC
Q 012998 324 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 403 (451)
Q Consensus 324 l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~ 403 (451)
.+...+...++.+|||+|||+|..+..++.. +...|+++|+++.+++.+++++.. . ++.++++|+..++ ...+
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~---~-~~~~~~~d~~~~~-~~~~ 106 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH--GASYVLGLDLSEKMLARARAAGPD---T-GITYERADLDKLH-LPQD 106 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCS---S-SEEEEECCGGGCC-CCTT
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHhccc---C-CceEEEcChhhcc-CCCC
Confidence 3455666678999999999999999999886 234999999999999999887654 2 4889999998865 2357
Q ss_pred CcCEEEEcC
Q 012998 404 KCDKVLLDA 412 (451)
Q Consensus 404 ~fD~VlvD~ 412 (451)
+||+|++..
T Consensus 107 ~fD~v~~~~ 115 (243)
T 3bkw_A 107 SFDLAYSSL 115 (243)
T ss_dssp CEEEEEEES
T ss_pred CceEEEEec
Confidence 899999754
No 221
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.53 E-value=1.5e-07 Score=100.50 Aligned_cols=80 Identities=15% Similarity=0.119 Sum_probs=68.2
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc-CCCCcCEEEEc
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN-STVKCDKVLLD 411 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~-~~~~fD~VlvD 411 (451)
.+.+|||+|||.|..+..||++ ++.|+|+|.++.+++.++..+...|..+ |.+.++|+.++... .+++||+|+|
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~fD~v~~- 140 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPDFA-AEFRVGRIEEVIAALEEGEFDLAIG- 140 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTTSE-EEEEECCHHHHHHHCCTTSCSEEEE-
T ss_pred CCCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCCCc-eEEEECCHHHHhhhccCCCccEEEE-
Confidence 4579999999999999999986 5799999999999999999999888655 89999999987532 3578999996
Q ss_pred CCCCCcccccc
Q 012998 412 APCSGLGVLSK 422 (451)
Q Consensus 412 ~PCSg~G~lrr 422 (451)
++++-+
T Consensus 141 -----~e~~eh 146 (569)
T 4azs_A 141 -----LSVFHH 146 (569)
T ss_dssp -----ESCHHH
T ss_pred -----Ccchhc
Confidence 666544
No 222
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.53 E-value=1.8e-07 Score=86.72 Aligned_cols=78 Identities=17% Similarity=0.265 Sum_probs=64.2
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCC--CceEEEEcCccccc------------
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQV--NSVIRTIHADLRTF------------ 397 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~--~~~I~~~~~Da~~~------------ 397 (451)
.+..+||++|| |+.|+.+|+. . .|+|+++|.+++..+.+++++++.|+ .++|+++.+|+...
T Consensus 29 ~~a~~VLEiGt--GySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~ 104 (202)
T 3cvo_A 29 EEAEVILEYGS--GGSTVVAAEL-P-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKW 104 (202)
T ss_dssp HHCSEEEEESC--SHHHHHHHTS-T-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTG
T ss_pred hCCCEEEEECc--hHHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhh
Confidence 35679999998 6888888874 3 59999999999999999999999998 77899999996542
Q ss_pred ---cc-------c-CCCCcCEEEEcCC
Q 012998 398 ---AD-------N-STVKCDKVLLDAP 413 (451)
Q Consensus 398 ---~~-------~-~~~~fD~VlvD~P 413 (451)
+. . ..++||+||+|+.
T Consensus 105 ~~l~~~~~~i~~~~~~~~fDlIfIDg~ 131 (202)
T 3cvo_A 105 RSYPDYPLAVWRTEGFRHPDVVLVDGR 131 (202)
T ss_dssp GGTTHHHHGGGGCTTCCCCSEEEECSS
T ss_pred hhHHHHhhhhhccccCCCCCEEEEeCC
Confidence 11 1 1368999999986
No 223
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.51 E-value=1.8e-07 Score=90.58 Aligned_cols=85 Identities=11% Similarity=0.095 Sum_probs=66.7
Q ss_pred hhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC---ceEEEEcCccccccc
Q 012998 323 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN---SVIRTIHADLRTFAD 399 (451)
Q Consensus 323 ~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~---~~I~~~~~Da~~~~~ 399 (451)
..+...+...++.+|||+|||+|..+..++.. ...|+|+|+|+.+++.+++++...+.. .++.+..+|+..++.
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 123 (293)
T 3thr_A 47 AWLLGLLRQHGCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDK 123 (293)
T ss_dssp HHHHHHHHHTTCCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHH
T ss_pred HHHHHHhcccCCCEEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcc
Confidence 34455566678899999999999999999886 359999999999999999988554432 236788899887651
Q ss_pred --cCCCCcCEEEE
Q 012998 400 --NSTVKCDKVLL 410 (451)
Q Consensus 400 --~~~~~fD~Vlv 410 (451)
...++||+|++
T Consensus 124 ~~~~~~~fD~V~~ 136 (293)
T 3thr_A 124 DVPAGDGFDAVIC 136 (293)
T ss_dssp HSCCTTCEEEEEE
T ss_pred ccccCCCeEEEEE
Confidence 13478999997
No 224
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.51 E-value=2.1e-07 Score=91.99 Aligned_cols=83 Identities=22% Similarity=0.253 Sum_probs=69.9
Q ss_pred hhhhhhCC--CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccC
Q 012998 324 LVVAVVDP--QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS 401 (451)
Q Consensus 324 l~~~~l~~--~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~ 401 (451)
.+...++. .++.+|||+|||+|..+..+++..+ ..+++++|++ .+++.+++++...|+.++|+++.+|+...+ .
T Consensus 154 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~ 229 (335)
T 2r3s_A 154 LIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNP-NAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVD--Y 229 (335)
T ss_dssp HHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSC--C
T ss_pred HHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCC--C
Confidence 33445565 7789999999999999999999864 4799999999 999999999999999878999999998753 2
Q ss_pred CCCcCEEEE
Q 012998 402 TVKCDKVLL 410 (451)
Q Consensus 402 ~~~fD~Vlv 410 (451)
...||+|++
T Consensus 230 ~~~~D~v~~ 238 (335)
T 2r3s_A 230 GNDYDLVLL 238 (335)
T ss_dssp CSCEEEEEE
T ss_pred CCCCcEEEE
Confidence 245999998
No 225
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.51 E-value=1.6e-07 Score=92.97 Aligned_cols=79 Identities=14% Similarity=0.140 Sum_probs=65.7
Q ss_pred CeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccC-CCCcCEEEEcCC
Q 012998 335 QSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS-TVKCDKVLLDAP 413 (451)
Q Consensus 335 ~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~-~~~fD~VlvD~P 413 (451)
.+|||+|||.|+.+..+++..+ ..+|++||+++.+++.+++++...+-. +++++++|+..+.... .++||+|++|++
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p-~~~v~~VEidp~vi~~Ar~~~~~~~~~-rv~v~~~Da~~~l~~~~~~~fDvIi~D~~ 168 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYP-QSRNTVVELDAELARLSREWFDIPRAP-RVKIRVDDARMVAESFTPASRDVIIRDVF 168 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHST-TCEEEEEESCHHHHHHHHHHSCCCCTT-TEEEEESCHHHHHHTCCTTCEEEEEECCS
T ss_pred CEEEEEECCcCHHHHHHHHHCC-CcEEEEEECCHHHHHHHHHhccccCCC-ceEEEECcHHHHHhhccCCCCCEEEECCC
Confidence 4999999999999999998754 469999999999999999998654433 5999999998875432 478999999976
Q ss_pred CC
Q 012998 414 CS 415 (451)
Q Consensus 414 CS 415 (451)
..
T Consensus 169 ~~ 170 (317)
T 3gjy_A 169 AG 170 (317)
T ss_dssp TT
T ss_pred Cc
Confidence 53
No 226
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.51 E-value=2.4e-07 Score=86.69 Aligned_cols=73 Identities=23% Similarity=0.282 Sum_probs=62.3
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEEc
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 411 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD 411 (451)
.++.+|||+|||+|..+..++.. ..|+++|+++.+++.+++++...+. .+.++++|+..++. .++||+|++.
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~--~~~fD~v~~~ 103 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETNR--HVDFWVQDMRELEL--PEPVDAITIL 103 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTTC--CCEEEECCGGGCCC--SSCEEEEEEC
T ss_pred CCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcCC--ceEEEEcChhhcCC--CCCcCEEEEe
Confidence 45789999999999999988765 6899999999999999999988873 37899999988653 3789999985
Q ss_pred C
Q 012998 412 A 412 (451)
Q Consensus 412 ~ 412 (451)
.
T Consensus 104 ~ 104 (243)
T 3d2l_A 104 C 104 (243)
T ss_dssp T
T ss_pred C
Confidence 3
No 227
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.50 E-value=1.2e-07 Score=91.04 Aligned_cols=89 Identities=17% Similarity=0.172 Sum_probs=67.8
Q ss_pred hhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc-
Q 012998 322 AGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN- 400 (451)
Q Consensus 322 s~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~- 400 (451)
...++..+++.+|++|||+|||+|..|. ++. ...++|+|+|+++.+++.+++++... . +++++++|+..++..
T Consensus 10 ~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~--~~~~~v~avEid~~~~~~a~~~~~~~--~-~v~~i~~D~~~~~~~~ 83 (252)
T 1qyr_A 10 IDSIVSAINPQKGQAMVEIGPGLAALTE-PVG--ERLDQLTVIELDRDLAARLQTHPFLG--P-KLTIYQQDAMTFNFGE 83 (252)
T ss_dssp HHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH--TTCSCEEEECCCHHHHHHHHTCTTTG--G-GEEEECSCGGGCCHHH
T ss_pred HHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh--CCCCeEEEEECCHHHHHHHHHHhccC--C-ceEEEECchhhCCHHH
Confidence 3445667788899999999999999999 643 22233999999999999999987653 3 489999999876421
Q ss_pred -C--CCCcCEEEEcCCCCC
Q 012998 401 -S--TVKCDKVLLDAPCSG 416 (451)
Q Consensus 401 -~--~~~fD~VlvD~PCSg 416 (451)
. .+..|.|+.++|..-
T Consensus 84 ~~~~~~~~~~vvsNlPY~i 102 (252)
T 1qyr_A 84 LAEKMGQPLRVFGNLPYNI 102 (252)
T ss_dssp HHHHHTSCEEEEEECCTTT
T ss_pred hhcccCCceEEEECCCCCc
Confidence 0 123579999999764
No 228
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.50 E-value=2.1e-07 Score=85.20 Aligned_cols=77 Identities=14% Similarity=0.174 Sum_probs=62.0
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEE
Q 012998 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 409 (451)
Q Consensus 330 ~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vl 409 (451)
...++.+|||+|||+|..++.++.. ....|+++|+++.+++.+++++...+. ++.++++|+..++ ...++||.|+
T Consensus 20 ~~~~~~~vLDiGcG~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~-~~~~~fD~v~ 94 (209)
T 2p8j_A 20 ESNLDKTVLDCGAGGDLPPLSIFVE--DGYKTYGIEISDLQLKKAENFSRENNF--KLNISKGDIRKLP-FKDESMSFVY 94 (209)
T ss_dssp HSSSCSEEEEESCCSSSCTHHHHHH--TTCEEEEEECCHHHHHHHHHHHHHHTC--CCCEEECCTTSCC-SCTTCEEEEE
T ss_pred ccCCCCEEEEECCCCCHHHHHHHHh--CCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEECchhhCC-CCCCceeEEE
Confidence 3456889999999999986655544 246999999999999999999988774 3788999998765 2357899999
Q ss_pred Ec
Q 012998 410 LD 411 (451)
Q Consensus 410 vD 411 (451)
+.
T Consensus 95 ~~ 96 (209)
T 2p8j_A 95 SY 96 (209)
T ss_dssp EC
T ss_pred Ec
Confidence 74
No 229
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.50 E-value=1.7e-07 Score=87.74 Aligned_cols=71 Identities=11% Similarity=0.080 Sum_probs=59.6
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
..++.+|||+|||+|..+..+++. ...|+++|+++.+++.+++++.. .+.++++|+..+. .+++||+|++
T Consensus 40 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~~--~~~~fD~v~~ 109 (250)
T 2p7i_A 40 FFRPGNLLELGSFKGDFTSRLQEH---FNDITCVEASEEAISHAQGRLKD-----GITYIHSRFEDAQ--LPRRYDNIVL 109 (250)
T ss_dssp GCCSSCEEEESCTTSHHHHHHTTT---CSCEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGCC--CSSCEEEEEE
T ss_pred hcCCCcEEEECCCCCHHHHHHHHh---CCcEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHcC--cCCcccEEEE
Confidence 356889999999999999999875 34899999999999999988754 3889999998873 3578999997
Q ss_pred c
Q 012998 411 D 411 (451)
Q Consensus 411 D 411 (451)
.
T Consensus 110 ~ 110 (250)
T 2p7i_A 110 T 110 (250)
T ss_dssp E
T ss_pred h
Confidence 3
No 230
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.50 E-value=3e-07 Score=82.59 Aligned_cols=74 Identities=16% Similarity=0.147 Sum_probs=61.3
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
+.++.+|||+|||+|..+..++.. ...|+++|+++.+++.+++++. + +.++++|+..++ ...++||+|++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~~-----~-~~~~~~d~~~~~-~~~~~~D~i~~ 113 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDFP-----E-ARWVVGDLSVDQ-ISETDFDLIVS 113 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHCT-----T-SEEEECCTTTSC-CCCCCEEEEEE
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhCC-----C-CcEEEcccccCC-CCCCceeEEEE
Confidence 457899999999999999999886 4699999999999999998763 2 678889988764 23478999999
Q ss_pred cCCC
Q 012998 411 DAPC 414 (451)
Q Consensus 411 D~PC 414 (451)
++++
T Consensus 114 ~~~~ 117 (195)
T 3cgg_A 114 AGNV 117 (195)
T ss_dssp CCCC
T ss_pred CCcH
Confidence 7554
No 231
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.50 E-value=3.1e-07 Score=90.29 Aligned_cols=77 Identities=10% Similarity=-0.021 Sum_probs=56.3
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc-----eEEEEcCcc------ccccc-
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS-----VIRTIHADL------RTFAD- 399 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~-----~I~~~~~Da------~~~~~- 399 (451)
.+|.+|||+|||+|+.+..++.. +.+.|+|+|+|+.+++.++++....+... .+.+.+.|+ ..+..
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~--~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~ 124 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYG--EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREV 124 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTT
T ss_pred CCCCeEEEEecCCcHhHHHHHhc--CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcc
Confidence 35889999999999877665553 34689999999999999999988777531 155666666 33321
Q ss_pred cCCCCcCEEEE
Q 012998 400 NSTVKCDKVLL 410 (451)
Q Consensus 400 ~~~~~fD~Vlv 410 (451)
...++||+|+|
T Consensus 125 ~~~~~FD~V~~ 135 (302)
T 2vdw_A 125 FYFGKFNIIDW 135 (302)
T ss_dssp CCSSCEEEEEE
T ss_pred ccCCCeeEEEE
Confidence 23468999985
No 232
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.49 E-value=2.4e-07 Score=85.17 Aligned_cols=71 Identities=14% Similarity=0.000 Sum_probs=59.7
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEE
Q 012998 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 409 (451)
Q Consensus 330 ~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vl 409 (451)
.+.++.+|||+|||+|..+..++.. ...|+++|+++.+++.+++++ + +.++.+|+..++ ..++||+|+
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~---~----~~~~~~d~~~~~--~~~~fD~v~ 107 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL---G----RPVRTMLFHQLD--AIDAYDAVW 107 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH---T----SCCEECCGGGCC--CCSCEEEEE
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc---C----CceEEeeeccCC--CCCcEEEEE
Confidence 3457899999999999999999886 469999999999999999887 2 446778988876 457899999
Q ss_pred EcC
Q 012998 410 LDA 412 (451)
Q Consensus 410 vD~ 412 (451)
+..
T Consensus 108 ~~~ 110 (211)
T 3e23_A 108 AHA 110 (211)
T ss_dssp ECS
T ss_pred ecC
Confidence 753
No 233
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.49 E-value=4.4e-07 Score=91.16 Aligned_cols=84 Identities=14% Similarity=0.074 Sum_probs=70.0
Q ss_pred hhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCC
Q 012998 323 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 402 (451)
Q Consensus 323 ~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~ 402 (451)
..+...++..++.+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++++...|+.++|+++.+|+.+.. +
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~ 246 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAP-HLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPL---P 246 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCC---S
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCC-CCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcC---C
Confidence 3444556677889999999999999999999864 579999999 9999999999999999867999999987521 2
Q ss_pred CCcCEEEEc
Q 012998 403 VKCDKVLLD 411 (451)
Q Consensus 403 ~~fD~VlvD 411 (451)
..||+|++.
T Consensus 247 ~~~D~v~~~ 255 (374)
T 1qzz_A 247 VTADVVLLS 255 (374)
T ss_dssp CCEEEEEEE
T ss_pred CCCCEEEEe
Confidence 349999984
No 234
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.48 E-value=2.6e-08 Score=96.87 Aligned_cols=75 Identities=19% Similarity=0.147 Sum_probs=54.7
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHH-HHcCCCceEEEE--cCccccccccCCCCcCE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETA-KLHQVNSVIRTI--HADLRTFADNSTVKCDK 407 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~-~~~g~~~~I~~~--~~Da~~~~~~~~~~fD~ 407 (451)
+++|.+|||+|||||+.|..+++. ++|+|+|+++ ++..++++. ........+.++ ++|+..++ +++||+
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~---~~~fD~ 151 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME---PFQADT 151 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC---CCCCSE
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC---CCCcCE
Confidence 468999999999999999998875 6899999998 433222110 000111137888 99998875 468999
Q ss_pred EEEcCC
Q 012998 408 VLLDAP 413 (451)
Q Consensus 408 VlvD~P 413 (451)
|++|..
T Consensus 152 Vvsd~~ 157 (276)
T 2wa2_A 152 VLCDIG 157 (276)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 999976
No 235
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.48 E-value=2.9e-07 Score=84.03 Aligned_cols=68 Identities=16% Similarity=0.152 Sum_probs=58.3
Q ss_pred CCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEEc
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 411 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD 411 (451)
+.+|||+|||+|..+..++.. ...|+++|+++.+++.++++. .+ +.++++|+..++ ...++||+|++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~-----~~-~~~~~~d~~~~~-~~~~~fD~v~~~ 109 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLVELARQTH-----PS-VTFHHGTITDLS-DSPKRWAGLLAW 109 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHHC-----TT-SEEECCCGGGGG-GSCCCEEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhC-----CC-CeEEeCcccccc-cCCCCeEEEEeh
Confidence 889999999999999999886 458999999999999998873 23 789999998875 345789999985
No 236
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.47 E-value=2e-07 Score=82.65 Aligned_cols=75 Identities=20% Similarity=0.218 Sum_probs=60.5
Q ss_pred hhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCc
Q 012998 326 VAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKC 405 (451)
Q Consensus 326 ~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~f 405 (451)
...+.+.++.+|||+|||+|..+..++... ..|+++|+++.+++.++++ .. +++++.+| .. ...++|
T Consensus 10 ~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-----~~-~v~~~~~d-~~---~~~~~~ 76 (170)
T 3i9f_A 10 LPNIFEGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEK-----FD-SVITLSDP-KE---IPDNSV 76 (170)
T ss_dssp HHHHHSSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHH-----CT-TSEEESSG-GG---SCTTCE
T ss_pred HHhcCcCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHh-----CC-CcEEEeCC-CC---CCCCce
Confidence 345567789999999999999999998874 4999999999999999988 33 37889999 22 235789
Q ss_pred CEEEEcCC
Q 012998 406 DKVLLDAP 413 (451)
Q Consensus 406 D~VlvD~P 413 (451)
|+|++...
T Consensus 77 D~v~~~~~ 84 (170)
T 3i9f_A 77 DFILFANS 84 (170)
T ss_dssp EEEEEESC
T ss_pred EEEEEccc
Confidence 99997543
No 237
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.47 E-value=4e-08 Score=94.99 Aligned_cols=73 Identities=19% Similarity=0.155 Sum_probs=54.2
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHH---HHHcCCCceEEEE--cCccccccccCCCCc
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNET---AKLHQVNSVIRTI--HADLRTFADNSTVKC 405 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~---~~~~g~~~~I~~~--~~Da~~~~~~~~~~f 405 (451)
+++|.+|||+|||||+.|..+++. ++|+|+|+++ ++..++++ .+..|. + |.++ ++|+..++ +++|
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~~~~~-~-v~~~~~~~D~~~l~---~~~f 141 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRITESYGW-N-IVKFKSRVDIHTLP---VERT 141 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCCCCBTTG-G-GEEEECSCCTTTSC---CCCC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhhhhccCC-C-eEEEecccCHhHCC---CCCC
Confidence 568999999999999999988875 7899999998 43222111 011111 3 7788 89998875 3689
Q ss_pred CEEEEcCC
Q 012998 406 DKVLLDAP 413 (451)
Q Consensus 406 D~VlvD~P 413 (451)
|+|++|..
T Consensus 142 D~V~sd~~ 149 (265)
T 2oxt_A 142 DVIMCDVG 149 (265)
T ss_dssp SEEEECCC
T ss_pred cEEEEeCc
Confidence 99999976
No 238
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.45 E-value=3.6e-07 Score=85.53 Aligned_cols=73 Identities=12% Similarity=0.126 Sum_probs=60.8
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
+.++.+|||+|||+|..+..++.. ...|+++|+++.+++.++++. ... ++.++++|+..++ ...++||+|++
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~---~~~-~~~~~~~d~~~~~-~~~~~fD~v~~ 122 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERG---EGP-DLSFIKGDLSSLP-FENEQFEAIMA 122 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTT---CBT-TEEEEECBTTBCS-SCTTCEEEEEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhc---ccC-CceEEEcchhcCC-CCCCCccEEEE
Confidence 347889999999999999999986 469999999999999998875 223 4889999998875 23578999997
Q ss_pred c
Q 012998 411 D 411 (451)
Q Consensus 411 D 411 (451)
.
T Consensus 123 ~ 123 (242)
T 3l8d_A 123 I 123 (242)
T ss_dssp E
T ss_pred c
Confidence 4
No 239
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.44 E-value=2.4e-07 Score=92.95 Aligned_cols=80 Identities=11% Similarity=0.135 Sum_probs=65.3
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcC---CCc----eEEEEcCcccccccc---CC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQ---VNS----VIRTIHADLRTFADN---ST 402 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g---~~~----~I~~~~~Da~~~~~~---~~ 402 (451)
.+.+|||+|+|.|+.+..++.. + ..+|++||+++.+++.+++++...+ +.+ +++++.+|+..+... ..
T Consensus 188 ~pkrVL~IGgG~G~~arellk~-~-~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEEECChhHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 4679999999999999988876 2 3789999999999999999987542 222 589999999987653 25
Q ss_pred CCcCEEEEcCCC
Q 012998 403 VKCDKVLLDAPC 414 (451)
Q Consensus 403 ~~fD~VlvD~PC 414 (451)
++||+|++|+|-
T Consensus 266 ~~fDvII~D~~d 277 (364)
T 2qfm_A 266 REFDYVINDLTA 277 (364)
T ss_dssp CCEEEEEEECCS
T ss_pred CCceEEEECCCC
Confidence 789999999975
No 240
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.44 E-value=2.4e-07 Score=90.65 Aligned_cols=74 Identities=19% Similarity=0.178 Sum_probs=56.8
Q ss_pred hCCCCCCeEEeecC------CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEE-EcCccccccccC
Q 012998 329 VDPQPGQSIVDCCA------APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRT-IHADLRTFADNS 401 (451)
Q Consensus 329 l~~~~g~~VLDlca------gpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~-~~~Da~~~~~~~ 401 (451)
+.+++|++|||+|| |||+ ..++..++..++|+|+|+++. +.+ +++ +++|+..++.
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v~~-v~~~i~gD~~~~~~-- 120 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------VSD-ADSTLIGDCATVHT-- 120 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------BCS-SSEEEESCGGGCCC--
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------CCC-CEEEEECccccCCc--
Confidence 46788999999999 6688 556777776789999999998 133 677 9999987642
Q ss_pred CCCcCEEEEcCCCCCcccc
Q 012998 402 TVKCDKVLLDAPCSGLGVL 420 (451)
Q Consensus 402 ~~~fD~VlvD~PCSg~G~l 420 (451)
.++||+|++|+++...|..
T Consensus 121 ~~~fD~Vvsn~~~~~~g~~ 139 (290)
T 2xyq_A 121 ANKWDLIISDMYDPRTKHV 139 (290)
T ss_dssp SSCEEEEEECCCCCC---C
T ss_pred cCcccEEEEcCCccccccc
Confidence 3689999999887776664
No 241
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.43 E-value=3.2e-07 Score=86.33 Aligned_cols=69 Identities=12% Similarity=0.118 Sum_probs=57.3
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccc-ccCCCCcCEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA-DNSTVKCDKVL 409 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~-~~~~~~fD~Vl 409 (451)
..++.+|||+|||+|..+..++.. ...|+++|+++.+++.++++ +.++.+|+..+. +..+++||+|+
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~~~~~fD~i~ 106 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSLPDKYLDGVM 106 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTSCTTCBSEEE
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhcCCCCeeEEE
Confidence 467899999999999999999886 45899999999999988876 467889988753 33457899999
Q ss_pred Ec
Q 012998 410 LD 411 (451)
Q Consensus 410 vD 411 (451)
+.
T Consensus 107 ~~ 108 (240)
T 3dli_A 107 IS 108 (240)
T ss_dssp EE
T ss_pred EC
Confidence 73
No 242
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.42 E-value=6.2e-07 Score=89.39 Aligned_cols=82 Identities=12% Similarity=0.076 Sum_probs=69.3
Q ss_pred hhhCCCC-CCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCc
Q 012998 327 AVVDPQP-GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKC 405 (451)
Q Consensus 327 ~~l~~~~-g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~f 405 (451)
..++..+ +.+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++++...++.++|+++.+|+...+....+.|
T Consensus 172 ~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 249 (352)
T 3mcz_A 172 SELGVFARARTVIDLAGGHGTYLAQVLRRHP-QLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAA 249 (352)
T ss_dssp HTCGGGTTCCEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCE
T ss_pred HhCCCcCCCCEEEEeCCCcCHHHHHHHHhCC-CCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCc
Confidence 3445556 88999999999999999998865 479999999 88999999999999998889999999987652234679
Q ss_pred CEEEE
Q 012998 406 DKVLL 410 (451)
Q Consensus 406 D~Vlv 410 (451)
|+|++
T Consensus 250 D~v~~ 254 (352)
T 3mcz_A 250 DVVML 254 (352)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 99997
No 243
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.40 E-value=1.6e-07 Score=90.24 Aligned_cols=67 Identities=16% Similarity=0.152 Sum_probs=55.5
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEE
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
.+.+|||+|||+|..|..++.. ..+|+|+|+|+.|++.+++ .. +|.++++|+.+++ ..+++||+|++
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~---~~~v~gvD~s~~ml~~a~~------~~-~v~~~~~~~e~~~-~~~~sfD~v~~ 105 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEF---FERVHAVDPGEAQIRQALR------HP-RVTYAVAPAEDTG-LPPASVDVAIA 105 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTT---CSEEEEEESCHHHHHTCCC------CT-TEEEEECCTTCCC-CCSSCEEEEEE
T ss_pred CCCCEEEEcCCCCHHHHHHHHh---CCEEEEEeCcHHhhhhhhh------cC-Cceeehhhhhhhc-ccCCcccEEEE
Confidence 3579999999999999999875 4689999999999986643 23 3899999998875 34689999997
No 244
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.40 E-value=3e-07 Score=87.59 Aligned_cols=69 Identities=19% Similarity=0.228 Sum_probs=58.7
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEEc
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 411 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD 411 (451)
.++.+|||+|||+|..+..++.. ...|+++|+++.+++.+++++. + +.++++|+..++. .++||+|++.
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~-----~-~~~~~~d~~~~~~--~~~fD~v~~~ 117 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS---FGTVEGLELSADMLAIARRRNP-----D-AVLHHGDMRDFSL--GRRFSAVTCM 117 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT---SSEEEEEESCHHHHHHHHHHCT-----T-SEEEECCTTTCCC--SCCEEEEEEC
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhCC-----C-CEEEECChHHCCc--cCCcCEEEEc
Confidence 45789999999999999998876 3689999999999999998864 3 6789999988753 5789999974
No 245
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.39 E-value=6.8e-07 Score=94.60 Aligned_cols=105 Identities=19% Similarity=0.251 Sum_probs=82.2
Q ss_pred cCceeeecchhhhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCC------------CceEEEEeCCHHHHHHHHHHHH
Q 012998 312 EGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSG------------QGLVYAIDINKGRLRILNETAK 379 (451)
Q Consensus 312 ~G~~~vQd~as~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~------------~g~V~AvDi~~~rl~~l~~~~~ 379 (451)
.|.|+=-..-+.+++.++++++|++|+|-|||+|++-+.+.+.+.. ...++|+|+++.....++-|+-
T Consensus 196 ~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~ 275 (530)
T 3ufb_A 196 SGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLL 275 (530)
T ss_dssp CCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHH
T ss_pred CceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHH
Confidence 3555444455678889999999999999999999998888776543 2469999999999999999999
Q ss_pred HcCCCceEEEEcCcccccccc---CCCCcCEEEEcCCCCCc
Q 012998 380 LHQVNSVIRTIHADLRTFADN---STVKCDKVLLDAPCSGL 417 (451)
Q Consensus 380 ~~g~~~~I~~~~~Da~~~~~~---~~~~fD~VlvD~PCSg~ 417 (451)
-.|+.. -.+.++|....+.. ...+||+|+.+||.++.
T Consensus 276 lhg~~~-~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~ 315 (530)
T 3ufb_A 276 LHGLEY-PRIDPENSLRFPLREMGDKDRVDVILTNPPFGGE 315 (530)
T ss_dssp HHTCSC-CEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCB
T ss_pred hcCCcc-ccccccccccCchhhhcccccceEEEecCCCCcc
Confidence 999864 45678887654321 13579999999999764
No 246
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.38 E-value=7.3e-07 Score=89.31 Aligned_cols=84 Identities=18% Similarity=0.210 Sum_probs=70.2
Q ss_pred hhhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCC
Q 012998 323 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 402 (451)
Q Consensus 323 ~l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~ 402 (451)
..+...++..++.+|||+|||+|..+..+++..+ ..+++++|+ +.+++.++++++..|+.++|+++.+|+...+.
T Consensus 180 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--- 254 (359)
T 1x19_A 180 QLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFP-ELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESY--- 254 (359)
T ss_dssp HHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCC---
T ss_pred HHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCC-CCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCC---
Confidence 3445556677889999999999999999999854 479999999 99999999999999998789999999987532
Q ss_pred CCcCEEEEc
Q 012998 403 VKCDKVLLD 411 (451)
Q Consensus 403 ~~fD~VlvD 411 (451)
..+|+|++.
T Consensus 255 ~~~D~v~~~ 263 (359)
T 1x19_A 255 PEADAVLFC 263 (359)
T ss_dssp CCCSEEEEE
T ss_pred CCCCEEEEe
Confidence 234998873
No 247
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.38 E-value=3.3e-07 Score=84.49 Aligned_cols=77 Identities=8% Similarity=-0.043 Sum_probs=59.3
Q ss_pred hhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccc---cccCCC
Q 012998 327 AVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF---ADNSTV 403 (451)
Q Consensus 327 ~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~---~~~~~~ 403 (451)
..+...++.+|||+|||+|..+..++.. ..+|+++|+++.+++.++++ + .+.+..+|+..+ +.....
T Consensus 46 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~----~---~~~~~~~~~~~~~~~~~~~~~ 115 (227)
T 3e8s_A 46 LAILGRQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA----G---AGEVHLASYAQLAEAKVPVGK 115 (227)
T ss_dssp HHHHHTCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT----C---SSCEEECCHHHHHTTCSCCCC
T ss_pred HHhhcCCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh----c---ccccchhhHHhhcccccccCC
Confidence 3444556799999999999999999876 46899999999999999887 1 245677888776 222345
Q ss_pred CcCEEEEcCC
Q 012998 404 KCDKVLLDAP 413 (451)
Q Consensus 404 ~fD~VlvD~P 413 (451)
+||+|++...
T Consensus 116 ~fD~v~~~~~ 125 (227)
T 3e8s_A 116 DYDLICANFA 125 (227)
T ss_dssp CEEEEEEESC
T ss_pred CccEEEECch
Confidence 6999998643
No 248
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.37 E-value=6.5e-07 Score=87.01 Aligned_cols=80 Identities=9% Similarity=0.074 Sum_probs=57.4
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcC---CCceE--EEEeCCHHHHHHHHHHHHHc-CCCc-eEEEEcCccccccc----
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLS---GQGLV--YAIDINKGRLRILNETAKLH-QVNS-VIRTIHADLRTFAD---- 399 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~---~~g~V--~AvDi~~~rl~~l~~~~~~~-g~~~-~I~~~~~Da~~~~~---- 399 (451)
+.++.+|||+|||+|..|..++..+. +...| +++|+|+.|++.+++++... ++.+ .+.+..+|+..+..
T Consensus 50 ~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 50 TKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp TCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHT
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcc
Confidence 45778999999999998876554331 34544 99999999999999998764 5654 13445667765531
Q ss_pred -cCCCCcCEEEE
Q 012998 400 -NSTVKCDKVLL 410 (451)
Q Consensus 400 -~~~~~fD~Vlv 410 (451)
..+++||+|++
T Consensus 130 ~~~~~~fD~V~~ 141 (292)
T 2aot_A 130 KKELQKWDFIHM 141 (292)
T ss_dssp TTCCCCEEEEEE
T ss_pred ccCCCceeEEEE
Confidence 23578999986
No 249
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.37 E-value=1e-06 Score=86.41 Aligned_cols=77 Identities=13% Similarity=0.046 Sum_probs=61.6
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc-------CCCceEEEEcCcccccc---cc-
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH-------QVNSVIRTIHADLRTFA---DN- 400 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~-------g~~~~I~~~~~Da~~~~---~~- 400 (451)
.++.+|||+|||+|..+..++.. +...|+++|+++.+++.++++.... +.. .+.++++|+..++ ..
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~ 109 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIF-SAEFITADSSKELLIDKFR 109 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCC-EEEEEECCTTTSCSTTTCS
T ss_pred CCCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccc-eEEEEEecccccchhhhcc
Confidence 36789999999999999999874 3579999999999999999998775 333 4899999998764 11
Q ss_pred -CCCCcCEEEEc
Q 012998 401 -STVKCDKVLLD 411 (451)
Q Consensus 401 -~~~~fD~VlvD 411 (451)
..++||+|++.
T Consensus 110 ~~~~~fD~V~~~ 121 (313)
T 3bgv_A 110 DPQMCFDICSCQ 121 (313)
T ss_dssp STTCCEEEEEEE
T ss_pred cCCCCEEEEEEe
Confidence 13589999973
No 250
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.36 E-value=8.7e-07 Score=88.59 Aligned_cols=83 Identities=14% Similarity=0.158 Sum_probs=69.1
Q ss_pred hhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCC
Q 012998 324 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 403 (451)
Q Consensus 324 l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~ 403 (451)
.+...++..++.+|||+|||+|..+..++...+ ...++++|+ +.+++.+++++...|+.++|+++.+|+.+.. +.
T Consensus 174 ~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~ 248 (360)
T 1tw3_A 174 APAAAYDWTNVRHVLDVGGGKGGFAAAIARRAP-HVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPL---PR 248 (360)
T ss_dssp HHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCC---SS
T ss_pred HHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCC-CCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCC---CC
Confidence 344556677889999999999999999998864 478999999 9999999999999999767999999987522 23
Q ss_pred CcCEEEEc
Q 012998 404 KCDKVLLD 411 (451)
Q Consensus 404 ~fD~VlvD 411 (451)
.||+|++.
T Consensus 249 ~~D~v~~~ 256 (360)
T 1tw3_A 249 KADAIILS 256 (360)
T ss_dssp CEEEEEEE
T ss_pred CccEEEEc
Confidence 49999874
No 251
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.36 E-value=6.1e-07 Score=84.42 Aligned_cols=77 Identities=14% Similarity=0.198 Sum_probs=61.6
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccC----CCCcC
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS----TVKCD 406 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~----~~~fD 406 (451)
+.++.+|||+|||+|..+..++... .+|+++|+++.+++.+++++. .. +++++++|+.++.... ...||
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~---~~v~gvD~s~~~~~~a~~~~~---~~-~~~~~~~d~~~~~~~~~~~~~~~~d 126 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFF---PRVIGLDVSKSALEIAAKENT---AA-NISYRLLDGLVPEQAAQIHSEIGDA 126 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHS---SCEEEEESCHHHHHHHHHHSC---CT-TEEEEECCTTCHHHHHHHHHHHCSC
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhC---CCEEEEECCHHHHHHHHHhCc---cc-CceEEECcccccccccccccccCcc
Confidence 5678999999999999999999873 389999999999999998872 23 3899999998764321 12489
Q ss_pred EEEEcCCC
Q 012998 407 KVLLDAPC 414 (451)
Q Consensus 407 ~VlvD~PC 414 (451)
+|++....
T Consensus 127 ~v~~~~~~ 134 (245)
T 3ggd_A 127 NIYMRTGF 134 (245)
T ss_dssp EEEEESSS
T ss_pred EEEEcchh
Confidence 99987543
No 252
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.34 E-value=1.1e-06 Score=83.21 Aligned_cols=72 Identities=17% Similarity=0.201 Sum_probs=60.0
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEEc
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 411 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD 411 (451)
.+..+|||+|||.|-.++.+. +..+++|+|+++.+++.+++++..+|.. ..+..+|....+ ..+.||+|++-
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g~~--~~~~v~D~~~~~--~~~~~DvvLll 175 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKDWD--FTFALQDVLCAP--PAEAGDLALIF 175 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTTCE--EEEEECCTTTSC--CCCBCSEEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEeecccCC--CCCCcchHHHH
Confidence 456799999999999888766 5689999999999999999999999964 678888987654 34689998653
No 253
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.31 E-value=1e-06 Score=80.87 Aligned_cols=68 Identities=18% Similarity=0.110 Sum_probs=55.7
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEEcC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDA 412 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD~ 412 (451)
++.+|||+|||+|..+..+ +...|+++|+++.+++.+++++ .+ +.++++|+..++ ..+++||+|++..
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~-----~~-~~~~~~d~~~~~-~~~~~fD~v~~~~ 103 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA-----PE-ATWVRAWGEALP-FPGESFDVVLLFT 103 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC-----TT-SEEECCCTTSCC-SCSSCEEEEEEES
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC-----CC-cEEEEcccccCC-CCCCcEEEEEEcC
Confidence 7889999999999988766 2238999999999999999887 33 678899998765 2356899999753
No 254
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.31 E-value=1.2e-06 Score=81.59 Aligned_cols=68 Identities=15% Similarity=0.190 Sum_probs=57.6
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEE
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
.++.+|||+|||+|..+..++... ..|+++|+++.+++.+++++ .+ +.++++|+..++. .++||+|++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~-----~~-~~~~~~d~~~~~~--~~~~D~v~~ 106 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF---GDTAGLELSEDMLTHARKRL-----PD-ATLHQGDMRDFRL--GRKFSAVVS 106 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH---SEEEEEESCHHHHHHHHHHC-----TT-CEEEECCTTTCCC--SSCEEEEEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhC-----CC-CEEEECCHHHccc--CCCCcEEEE
Confidence 568899999999999999999873 38999999999999998875 23 7788999987653 578999995
No 255
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.31 E-value=1.1e-06 Score=83.82 Aligned_cols=72 Identities=14% Similarity=0.161 Sum_probs=59.5
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEEc
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 411 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD 411 (451)
.++.+|||+|||+|..+..++..++ .+.|+++|+++.+++.++++. .+ +.++.+|+..++ ..+++||+|++.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~-----~~-~~~~~~d~~~~~-~~~~~fD~v~~~ 155 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALP-EITTFGLDVSKVAIKAAAKRY-----PQ-VTFCVASSHRLP-FSDTSMDAIIRI 155 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCT-TSEEEEEESCHHHHHHHHHHC-----TT-SEEEECCTTSCS-BCTTCEEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhC-----CC-cEEEEcchhhCC-CCCCceeEEEEe
Confidence 5788999999999999999998763 479999999999999998764 23 678889988765 235689999963
No 256
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.31 E-value=2.5e-07 Score=88.77 Aligned_cols=80 Identities=14% Similarity=0.066 Sum_probs=58.1
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcC--C------------------------
Q 012998 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQ--V------------------------ 383 (451)
Q Consensus 330 ~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g--~------------------------ 383 (451)
.+.+|.+|||+|||+|..+..++.. +...|+|+|+|+.+++.++++++... +
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~--~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~ 129 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACD--SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEE 129 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGG--TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHh--hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHH
Confidence 4567899999999999887766543 23479999999999999999876532 1
Q ss_pred --CceEE-EEcCcccccccc---CCCCcCEEEEc
Q 012998 384 --NSVIR-TIHADLRTFADN---STVKCDKVLLD 411 (451)
Q Consensus 384 --~~~I~-~~~~Da~~~~~~---~~~~fD~VlvD 411 (451)
...|. ++++|+....+. ..++||+|++-
T Consensus 130 ~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~ 163 (263)
T 2a14_A 130 KLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTL 163 (263)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEE
T ss_pred HHHhhhheEEeccccCCCCCCccccCCCCEeeeh
Confidence 01243 788898774221 24689999973
No 257
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.30 E-value=5e-07 Score=90.69 Aligned_cols=78 Identities=19% Similarity=0.154 Sum_probs=60.7
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
+++|++|||+||+|||+|-.+++. +++|+|||+.+-. ..+. ..+ +|+++.+|+..+... ..+||.|++
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~l~-----~~l~--~~~-~V~~~~~d~~~~~~~-~~~~D~vvs 276 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGPMA-----QSLM--DTG-QVTWLREDGFKFRPT-RSNISWMVC 276 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSCCC-----HHHH--TTT-CEEEECSCTTTCCCC-SSCEEEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhhcC-----hhhc--cCC-CeEEEeCccccccCC-CCCcCEEEE
Confidence 578999999999999999999876 5899999976421 1121 223 489999999887532 468999999
Q ss_pred cCCCCCcccc
Q 012998 411 DAPCSGLGVL 420 (451)
Q Consensus 411 D~PCSg~G~l 420 (451)
|.-|.-.|+.
T Consensus 277 Dm~~~p~~~~ 286 (375)
T 4auk_A 277 DMVEKPAKVA 286 (375)
T ss_dssp CCSSCHHHHH
T ss_pred cCCCChHHhH
Confidence 9999877764
No 258
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.30 E-value=1.4e-06 Score=87.76 Aligned_cols=81 Identities=12% Similarity=-0.007 Sum_probs=68.4
Q ss_pred hhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCC
Q 012998 325 VVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVK 404 (451)
Q Consensus 325 ~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~ 404 (451)
+...++..++.+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++++...|+.++|+++.+|+... .+..
T Consensus 194 l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~---~p~~ 268 (369)
T 3gwz_A 194 VAAAYDFSGAATAVDIGGGRGSLMAAVLDAFP-GLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFET---IPDG 268 (369)
T ss_dssp HHHHSCCTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTC---CCSS
T ss_pred HHHhCCCccCcEEEEeCCCccHHHHHHHHHCC-CCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCC---CCCC
Confidence 44455667789999999999999999999854 579999999 999999999999999877899999999732 2237
Q ss_pred cCEEEE
Q 012998 405 CDKVLL 410 (451)
Q Consensus 405 fD~Vlv 410 (451)
||+|++
T Consensus 269 ~D~v~~ 274 (369)
T 3gwz_A 269 ADVYLI 274 (369)
T ss_dssp CSEEEE
T ss_pred ceEEEh
Confidence 999987
No 259
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.30 E-value=2e-06 Score=85.13 Aligned_cols=78 Identities=10% Similarity=0.022 Sum_probs=65.8
Q ss_pred hhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCE
Q 012998 328 VVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDK 407 (451)
Q Consensus 328 ~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~ 407 (451)
.++..++.+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++++...|+.++|+++.+|+... .+..||+
T Consensus 164 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~p~~~D~ 238 (332)
T 3i53_A 164 KYDWAALGHVVDVGGGSGGLLSALLTAHE-DLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDP---LPAGAGG 238 (332)
T ss_dssp SSCCGGGSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC---CCCSCSE
T ss_pred hCCCCCCCEEEEeCCChhHHHHHHHHHCC-CCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCC---CCCCCcE
Confidence 34445678999999999999999998865 478999999 999999999999999877899999998632 1237999
Q ss_pred EEE
Q 012998 408 VLL 410 (451)
Q Consensus 408 Vlv 410 (451)
|++
T Consensus 239 v~~ 241 (332)
T 3i53_A 239 YVL 241 (332)
T ss_dssp EEE
T ss_pred EEE
Confidence 996
No 260
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.30 E-value=3.8e-07 Score=87.90 Aligned_cols=74 Identities=7% Similarity=-0.138 Sum_probs=61.5
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc--CC-CceEEEEcCccccccccCCCCcCEEE
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--QV-NSVIRTIHADLRTFADNSTVKCDKVL 409 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~--g~-~~~I~~~~~Da~~~~~~~~~~fD~Vl 409 (451)
.+.+|||+|||+|+.+..++.. + ++|+++|+++.+++.+++++... ++ ..+++++.+|+..+. ++||+|+
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~--~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~----~~fD~Ii 144 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY--D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI----KKYDLIF 144 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS--S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC----CCEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhC--C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH----hhCCEEE
Confidence 4579999999999999988876 4 89999999999999999887542 22 235899999998764 6799999
Q ss_pred EcCC
Q 012998 410 LDAP 413 (451)
Q Consensus 410 vD~P 413 (451)
+|++
T Consensus 145 ~d~~ 148 (262)
T 2cmg_A 145 CLQE 148 (262)
T ss_dssp ESSC
T ss_pred ECCC
Confidence 9963
No 261
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.29 E-value=9.3e-07 Score=96.41 Aligned_cols=85 Identities=15% Similarity=0.168 Sum_probs=64.8
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCC--CceEEEEeCCHHHHHHH--HHHHHH----cCCCceEEEEcCccccccccCCC
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSG--QGLVYAIDINKGRLRIL--NETAKL----HQVNSVIRTIHADLRTFADNSTV 403 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~--~g~V~AvDi~~~rl~~l--~~~~~~----~g~~~~I~~~~~Da~~~~~~~~~ 403 (451)
.++.+|||.|||+|+..+.++..++. ...++|+|+++..++.+ +.|+.. .|+.+ ..+...|+.........
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~-~~I~~dD~L~~~~~~~~ 398 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNA-PTITGEDVCSLNPEDFA 398 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBC-CEEECCCGGGCCGGGGT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCc-ceEEecchhcccccccC
Confidence 46889999999999999999987742 35899999999999999 666655 34443 34556677654322346
Q ss_pred CcCEEEEcCCCCCc
Q 012998 404 KCDKVLLDAPCSGL 417 (451)
Q Consensus 404 ~fD~VlvD~PCSg~ 417 (451)
.||+|+++||.++.
T Consensus 399 kFDVVIgNPPYg~~ 412 (878)
T 3s1s_A 399 NVSVVVMNPPYVSG 412 (878)
T ss_dssp TEEEEEECCBCCSS
T ss_pred CCCEEEECCCcccc
Confidence 89999999999753
No 262
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.29 E-value=7.4e-07 Score=88.15 Aligned_cols=81 Identities=16% Similarity=0.156 Sum_probs=67.2
Q ss_pred hhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCC
Q 012998 325 VVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVK 404 (451)
Q Consensus 325 ~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~ 404 (451)
+...++..+ .+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++++...|+.++|+++.+|+... .++.
T Consensus 160 ~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~ 233 (334)
T 2ip2_A 160 IPRLLDFRG-RSFVDVGGGSGELTKAILQAEP-SARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQE---VPSN 233 (334)
T ss_dssp HHHHSCCTT-CEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTC---CCSS
T ss_pred HHHhCCCCC-CEEEEeCCCchHHHHHHHHHCC-CCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCC---CCCC
Confidence 334445555 8999999999999999998864 479999999 999999999999888877799999998762 2357
Q ss_pred cCEEEEc
Q 012998 405 CDKVLLD 411 (451)
Q Consensus 405 fD~VlvD 411 (451)
||+|++.
T Consensus 234 ~D~v~~~ 240 (334)
T 2ip2_A 234 GDIYLLS 240 (334)
T ss_dssp CSEEEEE
T ss_pred CCEEEEc
Confidence 9999963
No 263
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.28 E-value=2.1e-06 Score=86.37 Aligned_cols=76 Identities=13% Similarity=0.077 Sum_probs=65.2
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccc-ccCCCCcCEEEE
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA-DNSTVKCDKVLL 410 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~-~~~~~~fD~Vlv 410 (451)
.++.+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++++...|+.++|+++.+|+.... + .++.||+|++
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~p~~~D~v~~ 254 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNK-EVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVP-FPTGFDAVWM 254 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHST-TCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCC-CCCCCSEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCC-CCCCcCEEEE
Confidence 4568999999999999999998854 479999999 9999999999999998778999999998742 1 1267999987
No 264
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.27 E-value=3.3e-07 Score=86.95 Aligned_cols=80 Identities=16% Similarity=0.099 Sum_probs=61.5
Q ss_pred CCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCC--------------------------
Q 012998 330 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQV-------------------------- 383 (451)
Q Consensus 330 ~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~-------------------------- 383 (451)
...++.+|||+|||+|..+..++... ...|+++|+++.+++.+++++...+.
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACES--FTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEE 130 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhcc--cCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHH
Confidence 34568899999999999998887641 24899999999999999998876541
Q ss_pred --CceE-EEEcCccccccccCC---CCcCEEEEc
Q 012998 384 --NSVI-RTIHADLRTFADNST---VKCDKVLLD 411 (451)
Q Consensus 384 --~~~I-~~~~~Da~~~~~~~~---~~fD~VlvD 411 (451)
...+ .++.+|+........ ++||+|++.
T Consensus 131 ~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~ 164 (265)
T 2i62_A 131 KLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLST 164 (265)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEE
T ss_pred HhhhhheeEEEeeeccCCCCCccccCCccEEEEh
Confidence 1126 788999987643233 789999973
No 265
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.25 E-value=2e-06 Score=81.96 Aligned_cols=69 Identities=16% Similarity=0.158 Sum_probs=57.0
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEEcC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDA 412 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD~ 412 (451)
++.+|||+|||+|..+..++.. ...|+++|+++.+++.++++.. .+ ++.+|+..++ ...++||.|++..
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~----~~---~~~~d~~~~~-~~~~~fD~v~~~~ 122 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGV----KN---VVEAKAEDLP-FPSGAFEAVLALG 122 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTC----SC---EEECCTTSCC-SCTTCEEEEEECS
T ss_pred CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcC----CC---EEECcHHHCC-CCCCCEEEEEEcc
Confidence 7889999999999999999875 4689999999999999998765 22 6778988765 3357899999753
No 266
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.22 E-value=1.3e-06 Score=83.71 Aligned_cols=73 Identities=19% Similarity=0.087 Sum_probs=60.8
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEE
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
+..+|||+|||.|-.++.++... +..+++|+|+|+.+++.+++|+..+|+. ..+.+.|...-+ ..+.||+||+
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~-p~a~y~a~DId~~~le~a~~~l~~~g~~--~~~~v~D~~~~~--p~~~~DvaL~ 204 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLP-AETVYIASDIDARLVGFVDEALTRLNVP--HRTNVADLLEDR--LDEPADVTLL 204 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCC-TTCEEEEEESBHHHHHHHHHHHHHTTCC--EEEEECCTTTSC--CCSCCSEEEE
T ss_pred CCceeeeeccCccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEeeecccC--CCCCcchHHH
Confidence 35699999999999999887753 5689999999999999999999999997 567778876543 3467998875
No 267
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.21 E-value=2e-06 Score=79.35 Aligned_cols=70 Identities=14% Similarity=0.168 Sum_probs=55.7
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccc-ccCCCCcCEEEE
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA-DNSTVKCDKVLL 410 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~-~~~~~~fD~Vlv 410 (451)
.++.+|||+|||+|..+..++.. + ..|+++|+++.+++.++++.. .++.+|+..+. +..+++||+|++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~--~-~~~~~~D~~~~~~~~~~~~~~--------~~~~~d~~~~~~~~~~~~fD~v~~ 99 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN--G-TRVSGIEAFPEAAEQAKEKLD--------HVVLGDIETMDMPYEEEQFDCVIF 99 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT--T-CEEEEEESSHHHHHHHHTTSS--------EEEESCTTTCCCCSCTTCEEEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc--C-CeEEEEeCCHHHHHHHHHhCC--------cEEEcchhhcCCCCCCCccCEEEE
Confidence 67899999999999999999886 3 799999999999998886542 46778887632 223468999997
Q ss_pred cC
Q 012998 411 DA 412 (451)
Q Consensus 411 D~ 412 (451)
.-
T Consensus 100 ~~ 101 (230)
T 3cc8_A 100 GD 101 (230)
T ss_dssp ES
T ss_pred CC
Confidence 53
No 268
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.17 E-value=2.5e-07 Score=87.81 Aligned_cols=76 Identities=18% Similarity=0.147 Sum_probs=53.0
Q ss_pred CCCCCeEEeecCCCchHHHHHHHH--cCC-CceEEEEeC--CHHHHHHHHHHHHHcCCCceEEEEcC-ccccccccCCCC
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASC--LSG-QGLVYAIDI--NKGRLRILNETAKLHQVNSVIRTIHA-DLRTFADNSTVK 404 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~--~~~-~g~V~AvDi--~~~rl~~l~~~~~~~g~~~~I~~~~~-Da~~~~~~~~~~ 404 (451)
++||++|||+|||||+++..+++. ++. .|.|+|+|+ .+-... ..|+ +.+++..+ |++++. ..+
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~-------~~Gv-~~i~~~~G~Df~~~~---~~~ 139 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQ-------SYGW-NIVTMKSGVDVFYKP---SEI 139 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCC-------STTG-GGEEEECSCCGGGSC---CCC
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCccc-------CCCc-eEEEeeccCCccCCC---CCC
Confidence 468999999999999999999987 433 467788883 211100 0233 34677767 998753 357
Q ss_pred cCEEEEc-CCCCCccc
Q 012998 405 CDKVLLD-APCSGLGV 419 (451)
Q Consensus 405 fD~VlvD-~PCSg~G~ 419 (451)
+|+|++| +| + +|.
T Consensus 140 ~DvVLSDMAP-n-SG~ 153 (269)
T 2px2_A 140 SDTLLCDIGE-S-SPS 153 (269)
T ss_dssp CSEEEECCCC-C-CSC
T ss_pred CCEEEeCCCC-C-CCc
Confidence 9999999 56 4 554
No 269
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.13 E-value=3.8e-06 Score=81.43 Aligned_cols=78 Identities=17% Similarity=0.118 Sum_probs=57.1
Q ss_pred CCCeEEeecCCCch----HHHHHHHHcCC---CceEEEEeCCHHHHHHHHHHHH--------------H---------cC
Q 012998 333 PGQSIVDCCAAPGG----KTLYMASCLSG---QGLVYAIDINKGRLRILNETAK--------------L---------HQ 382 (451)
Q Consensus 333 ~g~~VLDlcagpG~----kT~~la~~~~~---~g~V~AvDi~~~rl~~l~~~~~--------------~---------~g 382 (451)
++.+|||+|||+|- .++.+++.++. ..+|+|+|+|+.+++.+++++- + .|
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35699999999998 66667776553 2489999999999999998751 0 01
Q ss_pred ---C----CceEEEEcCccccccccCCCCcCEEEE
Q 012998 383 ---V----NSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 383 ---~----~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
+ .+.|.+.++|..+.+....++||+|+|
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~c 219 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFC 219 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEE
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEE
Confidence 1 124899999988742111468999998
No 270
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.09 E-value=4.2e-06 Score=81.76 Aligned_cols=78 Identities=22% Similarity=0.181 Sum_probs=53.9
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc--cCCCCcCEEEE
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD--NSTVKCDKVLL 410 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~--~~~~~fD~Vlv 410 (451)
+|.+|||+|||||+.|..+++. +.++|+|+|+++.|++...++- ...+.+...|++.+.. .....||.|++
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~--ga~~V~aVDvs~~mL~~a~r~~-----~rv~~~~~~ni~~l~~~~l~~~~fD~v~~ 157 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN--GAKLVYAVDVGTNQLVWKLRQD-----DRVRSMEQYNFRYAEPVDFTEGLPSFASI 157 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSSSCSCHHHHTC-----TTEEEECSCCGGGCCGGGCTTCCCSEEEE
T ss_pred cccEEEecCCCccHHHHHHHhC--CCCEEEEEECCHHHHHHHHHhC-----cccceecccCceecchhhCCCCCCCEEEE
Confidence 5789999999999999999886 4579999999999998743321 1112222345544432 11234999999
Q ss_pred cCCCCCc
Q 012998 411 DAPCSGL 417 (451)
Q Consensus 411 D~PCSg~ 417 (451)
|.-...+
T Consensus 158 d~sf~sl 164 (291)
T 3hp7_A 158 DVSFISL 164 (291)
T ss_dssp CCSSSCG
T ss_pred EeeHhhH
Confidence 9876544
No 271
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.06 E-value=4.3e-06 Score=80.86 Aligned_cols=78 Identities=14% Similarity=0.163 Sum_probs=53.8
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc-----------------CCC----------
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH-----------------QVN---------- 384 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~-----------------g~~---------- 384 (451)
.++.+|||+|||+|..+. ++... ....|+|+|+++.+++.++++++.. |..
T Consensus 70 ~~~~~vLDiGcG~G~~~~-l~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 147 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQL-LSACS-HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQL 147 (289)
T ss_dssp SCCSEEEEETCTTCCGGG-TTGGG-GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHH-Hhhcc-CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHH
Confidence 368899999999999443 33322 2469999999999999999876532 100
Q ss_pred --ceEEEEcCcccc-ccc----cCCCCcCEEEEc
Q 012998 385 --SVIRTIHADLRT-FAD----NSTVKCDKVLLD 411 (451)
Q Consensus 385 --~~I~~~~~Da~~-~~~----~~~~~fD~VlvD 411 (451)
..+.++.+|+.. ++. ...++||+|++-
T Consensus 148 ~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~ 181 (289)
T 2g72_A 148 RARVKRVLPIDVHQPQPLGAGSPAPLPADALVSA 181 (289)
T ss_dssp HHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEE
T ss_pred HhhhceEEecccCCCCCccccccCCCCCCEEEeh
Confidence 125677789877 321 123569999974
No 272
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.06 E-value=1.7e-06 Score=81.82 Aligned_cols=78 Identities=22% Similarity=0.250 Sum_probs=52.6
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccc-ccCC-CCcCEEEE
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA-DNST-VKCDKVLL 410 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~-~~~~-~~fD~Vlv 410 (451)
+|.+|||+|||+|+.|..+++. +..+|+|+|+++.+++.++++..+... ....++..+. .... ..||.+.+
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~--g~~~V~gvDis~~ml~~a~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~d~~~~ 109 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN--GAKLVYALDVGTNQLAWKIRSDERVVV-----MEQFNFRNAVLADFEQGRPSFTSI 109 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSCCCCCHHHHTCTTEEE-----ECSCCGGGCCGGGCCSCCCSEEEE
T ss_pred CCCEEEEEccCCCHHHHHHHhc--CCCEEEEEcCCHHHHHHHHHhCccccc-----cccceEEEeCHhHcCcCCCCEEEE
Confidence 4679999999999999999886 335999999999999987665443211 1112222221 1111 24788888
Q ss_pred cCCCCCc
Q 012998 411 DAPCSGL 417 (451)
Q Consensus 411 D~PCSg~ 417 (451)
|...+..
T Consensus 110 D~v~~~l 116 (232)
T 3opn_A 110 DVSFISL 116 (232)
T ss_dssp CCSSSCG
T ss_pred EEEhhhH
Confidence 8877664
No 273
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.03 E-value=8e-06 Score=76.51 Aligned_cols=81 Identities=19% Similarity=0.188 Sum_probs=59.8
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcC-ccccccccCCCCcCEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA-DLRTFADNSTVKCDKVL 409 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~-Da~~~~~~~~~~fD~Vl 409 (451)
+++++.|||+||+|||++-.++...+ ..+|+|+|+-..-.+. -...+.+|.. .|++..+ |...+.+ .++|.|+
T Consensus 76 l~~g~~VvDLGaapGGWSq~~a~~~g-~~~V~avdvG~~ghe~-P~~~~s~gwn-~v~fk~gvDv~~~~~---~~~Dtll 149 (267)
T 3p8z_A 76 VIPEGRVIDLGCGRGGWSYYCAGLKK-VTEVRGYTKGGPGHEE-PVPMSTYGWN-IVKLMSGKDVFYLPP---EKCDTLL 149 (267)
T ss_dssp SCCCEEEEEESCTTSHHHHHHHTSTT-EEEEEEECCCSTTSCC-CCCCCCTTTT-SEEEECSCCGGGCCC---CCCSEEE
T ss_pred CCCCCEEEEcCCCCCcHHHHHHHhcC-CCEEEEEecCCCCccC-cchhhhcCcC-ceEEEeccceeecCC---ccccEEE
Confidence 56899999999999999998887643 4589999997653320 0112356665 4999999 9866653 5799999
Q ss_pred Ec-CCCCCc
Q 012998 410 LD-APCSGL 417 (451)
Q Consensus 410 vD-~PCSg~ 417 (451)
|| +|.|+.
T Consensus 150 cDIgeSs~~ 158 (267)
T 3p8z_A 150 CDIGESSPS 158 (267)
T ss_dssp ECCCCCCSC
T ss_pred EecCCCCCC
Confidence 99 676665
No 274
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.02 E-value=4.5e-06 Score=84.80 Aligned_cols=70 Identities=23% Similarity=0.200 Sum_probs=54.9
Q ss_pred CCCeEEeecCC------CchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc-----C
Q 012998 333 PGQSIVDCCAA------PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN-----S 401 (451)
Q Consensus 333 ~g~~VLDlcag------pG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~-----~ 401 (451)
++.+|||+||| +|+.++.++....+.++|+++|+++.+. .... +|+++++|+.+++.. .
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~-rI~fv~GDa~dlpf~~~l~~~ 285 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDEL-RIRTIQGDQNDAEFLDRIARR 285 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBT-TEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCC-CcEEEEecccccchhhhhhcc
Confidence 46899999999 8888998887765568999999999972 1223 499999999886421 1
Q ss_pred CCCcCEEEEcC
Q 012998 402 TVKCDKVLLDA 412 (451)
Q Consensus 402 ~~~fD~VlvD~ 412 (451)
.++||+|++|.
T Consensus 286 d~sFDlVisdg 296 (419)
T 3sso_A 286 YGPFDIVIDDG 296 (419)
T ss_dssp HCCEEEEEECS
T ss_pred cCCccEEEECC
Confidence 37899999874
No 275
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.02 E-value=1.8e-05 Score=76.53 Aligned_cols=75 Identities=13% Similarity=-0.003 Sum_probs=56.7
Q ss_pred CCCeEEeecCCC---chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc----------
Q 012998 333 PGQSIVDCCAAP---GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---------- 399 (451)
Q Consensus 333 ~g~~VLDlcagp---G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~---------- 399 (451)
+..+|||+|||+ |..+..++.. .+.++|+++|+|+.+++.+++++... .+++++++|+.+...
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~-~p~~~v~~vD~sp~~l~~Ar~~~~~~---~~v~~~~~D~~~~~~~~~~~~~~~~ 152 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSV-NPDARVVYVDIDPMVLTHGRALLAKD---PNTAVFTADVRDPEYILNHPDVRRM 152 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHH-CTTCEEEEEESSHHHHHHHHHHHTTC---TTEEEEECCTTCHHHHHHSHHHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHh-CCCCEEEEEECChHHHHHHHHhcCCC---CCeEEEEeeCCCchhhhccchhhcc
Confidence 457999999999 9876555544 44589999999999999999988532 348999999976421
Q ss_pred cCCCCcCEEEEc
Q 012998 400 NSTVKCDKVLLD 411 (451)
Q Consensus 400 ~~~~~fD~VlvD 411 (451)
.....||.|++-
T Consensus 153 ~d~~~~d~v~~~ 164 (274)
T 2qe6_A 153 IDFSRPAAIMLV 164 (274)
T ss_dssp CCTTSCCEEEET
T ss_pred CCCCCCEEEEEe
Confidence 112478999863
No 276
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.95 E-value=7.7e-06 Score=79.14 Aligned_cols=63 Identities=11% Similarity=0.003 Sum_probs=53.4
Q ss_pred CCeEEeecCCC--chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccc
Q 012998 334 GQSIVDCCAAP--GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF 397 (451)
Q Consensus 334 g~~VLDlcagp--G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~ 397 (451)
..+|||+|||+ |+.+..+++...+.++|+++|.|+.|++.+++++...+.. +++++++|++++
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~-~~~~v~aD~~~~ 143 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEG-RTAYVEADMLDP 143 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSS-EEEEEECCTTCH
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCC-cEEEEEecccCh
Confidence 36899999997 6677888887767789999999999999999988765433 589999999886
No 277
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.94 E-value=2.9e-05 Score=74.52 Aligned_cols=82 Identities=13% Similarity=0.123 Sum_probs=58.4
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHc------CCC-----ceEEEEeCCH---HHHH-----------HHHHHHHHc----
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCL------SGQ-----GLVYAIDINK---GRLR-----------ILNETAKLH---- 381 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~------~~~-----g~V~AvDi~~---~rl~-----------~l~~~~~~~---- 381 (451)
.+++.+|||+|+|+|..++.+++.. .+. ..++++|.++ +.+. .++++++..
T Consensus 58 ~~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~ 137 (257)
T 2qy6_A 58 PHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPL 137 (257)
T ss_dssp SSSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSC
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccc
Confidence 3456799999999999999887764 332 4899999887 4444 455665541
Q ss_pred ------CCC---ceEEEEcCccccccccCCC----CcCEEEEcC
Q 012998 382 ------QVN---SVIRTIHADLRTFADNSTV----KCDKVLLDA 412 (451)
Q Consensus 382 ------g~~---~~I~~~~~Da~~~~~~~~~----~fD~VlvD~ 412 (451)
++. .+++++.+|+.+..+.... .||+|++|+
T Consensus 138 ~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~ 181 (257)
T 2qy6_A 138 PGCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDG 181 (257)
T ss_dssp SEEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECS
T ss_pred cchhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECC
Confidence 121 2478999999885443322 799999997
No 278
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=97.92 E-value=4.4e-06 Score=85.27 Aligned_cols=78 Identities=10% Similarity=0.000 Sum_probs=56.3
Q ss_pred hhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEE-EEcCccccccccCCCC
Q 012998 326 VAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIR-TIHADLRTFADNSTVK 404 (451)
Q Consensus 326 ~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~-~~~~Da~~~~~~~~~~ 404 (451)
...+.+.++.+|||+|||+|..+..+++. ...|+++|+++.+++.++++ |+..... +...++..++ ..+++
T Consensus 100 ~~~~~~~~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~-~~~~~ 171 (416)
T 4e2x_A 100 LATELTGPDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVR-RTEGP 171 (416)
T ss_dssp HHTTTCSSSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHH-HHHCC
T ss_pred HHHhCCCCCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcc-cCCCC
Confidence 34456678999999999999999999875 45999999999999988765 5543221 2233444433 22468
Q ss_pred cCEEEEc
Q 012998 405 CDKVLLD 411 (451)
Q Consensus 405 fD~VlvD 411 (451)
||+|++.
T Consensus 172 fD~I~~~ 178 (416)
T 4e2x_A 172 ANVIYAA 178 (416)
T ss_dssp EEEEEEE
T ss_pred EEEEEEC
Confidence 9999873
No 279
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.91 E-value=3.5e-05 Score=76.51 Aligned_cols=81 Identities=21% Similarity=0.363 Sum_probs=64.1
Q ss_pred CCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEEcCC
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAP 413 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD~P 413 (451)
+.+|+|++||.||.++.+... +-..|+++|+++..++..+.|..... ++|...+.......+|+|+.+||
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a--G~~~v~~~e~d~~a~~t~~~N~~~~~--------~~Di~~~~~~~~~~~D~l~~gpP 80 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC--GAECVYSNEWDKYAQEVYEMNFGEKP--------EGDITQVNEKTIPDHDILCAGFP 80 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT--TCEEEEEECCCHHHHHHHHHHHSCCC--------BSCGGGSCGGGSCCCSEEEEECC
T ss_pred CCcEEEECCCcCHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHHcCCCC--------cCCHHHcCHhhCCCCCEEEECCC
Confidence 568999999999999888764 34568999999999999999974321 68888765433346999999999
Q ss_pred CCCccccccCC
Q 012998 414 CSGLGVLSKRA 424 (451)
Q Consensus 414 CSg~G~lrr~p 424 (451)
|-+.-+..++.
T Consensus 81 CQ~fS~ag~~~ 91 (327)
T 2c7p_A 81 CQAFSISGKQK 91 (327)
T ss_dssp CTTTCTTSCCC
T ss_pred CCCcchhcccC
Confidence 99998776543
No 280
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.90 E-value=3.6e-06 Score=81.42 Aligned_cols=77 Identities=12% Similarity=0.104 Sum_probs=62.9
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc---cCCCCcCEEE
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---NSTVKCDKVL 409 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~---~~~~~fD~Vl 409 (451)
.+..+||+.+|+|..++.+.+ +..+++.+|.++..++.+++|++. .+++++++.|+..... ....+||+||
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS---~~d~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~l~~~~~~fdLVf 164 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLR---SQDRLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLNALLPPPEKRGLIF 164 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSC---TTSEEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHHHHCSCTTSCEEEE
T ss_pred cCCCceeEeCCcHHHHHHHcC---CCCeEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHHHhcCCCCCccEEE
Confidence 467899999999999987665 457999999999999999999986 3458999999765432 1234799999
Q ss_pred EcCCCC
Q 012998 410 LDAPCS 415 (451)
Q Consensus 410 vD~PCS 415 (451)
+|||.-
T Consensus 165 iDPPYe 170 (283)
T 2oo3_A 165 IDPSYE 170 (283)
T ss_dssp ECCCCC
T ss_pred ECCCCC
Confidence 999986
No 281
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.87 E-value=1e-05 Score=74.84 Aligned_cols=64 Identities=9% Similarity=0.089 Sum_probs=52.1
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEEcC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDA 412 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD~ 412 (451)
++.+|||+|||+|..+..++.. +++|+++.+++.++++ + +.++.+|+..++ ...++||+|++..
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~-------~-~~~~~~d~~~~~-~~~~~fD~v~~~~ 110 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR-------G-VFVLKGTAENLP-LKDESFDFALMVT 110 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT-------T-CEEEECBTTBCC-SCTTCEEEEEEES
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc-------C-CEEEEcccccCC-CCCCCeeEEEEcc
Confidence 3889999999999998877542 9999999999998876 2 678889988764 2346899999753
No 282
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.87 E-value=2.5e-05 Score=79.10 Aligned_cols=81 Identities=17% Similarity=0.337 Sum_probs=60.7
Q ss_pred CeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc-------CCCCcCE
Q 012998 335 QSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN-------STVKCDK 407 (451)
Q Consensus 335 ~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~-------~~~~fD~ 407 (451)
.+|+|+|||.||.++-+... +--.|+|+|+++..++..+.|.. + ..++++|+..+... ....+|+
T Consensus 3 ~~vidLFsG~GGlslG~~~a--G~~~v~avE~d~~a~~t~~~N~~-----~-~~~~~~DI~~~~~~~~~~~~~~~~~~D~ 74 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA--GFDVKMAVEIDQHAINTHAINFP-----R-SLHVQEDVSLLNAEIIKGFFKNDMPIDG 74 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH--TCEEEEEECSCHHHHHHHHHHCT-----T-SEEECCCGGGCCHHHHHHHHCSCCCCCE
T ss_pred CeEEEEccCcCHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHhCC-----C-CceEecChhhcCHHHHHhhcccCCCeeE
Confidence 48999999999999988765 33467899999999999998853 2 35678898876421 1357999
Q ss_pred EEEcCCCCCccccccC
Q 012998 408 VLLDAPCSGLGVLSKR 423 (451)
Q Consensus 408 VlvD~PCSg~G~lrr~ 423 (451)
|+.+|||-+.-+..++
T Consensus 75 i~ggpPCQ~fS~ag~~ 90 (376)
T 3g7u_A 75 IIGGPPCQGFSSIGKG 90 (376)
T ss_dssp EEECCCCCTTC-----
T ss_pred EEecCCCCCcccccCC
Confidence 9999999998877654
No 283
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.85 E-value=3.1e-05 Score=75.28 Aligned_cols=81 Identities=11% Similarity=0.078 Sum_probs=65.9
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC----CCceEEEEeCCH--------------------------HHHHHHHHHHHHcC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS----GQGLVYAIDINK--------------------------GRLRILNETAKLHQ 382 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~----~~g~V~AvDi~~--------------------------~rl~~l~~~~~~~g 382 (451)
....||++|++.|+.++.++..+. +.++|+++|..+ .+++.+++|+++.|
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 345999999999999999998875 368999999642 15778999999999
Q ss_pred CC-ceEEEEcCccccccccC-CCCcCEEEEcCC
Q 012998 383 VN-SVIRTIHADLRTFADNS-TVKCDKVLLDAP 413 (451)
Q Consensus 383 ~~-~~I~~~~~Da~~~~~~~-~~~fD~VlvD~P 413 (451)
+. ++|+++.+|+.+..+.. .++||.|++|+-
T Consensus 186 l~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD 218 (282)
T 2wk1_A 186 LLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD 218 (282)
T ss_dssp CCSTTEEEEESCHHHHSTTCCCCCEEEEEECCC
T ss_pred CCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC
Confidence 93 67999999997654333 468999999974
No 284
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.84 E-value=1.9e-05 Score=78.92 Aligned_cols=83 Identities=13% Similarity=0.243 Sum_probs=55.8
Q ss_pred CeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccC-C-CCcCEEEEcC
Q 012998 335 QSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS-T-VKCDKVLLDA 412 (451)
Q Consensus 335 ~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~-~-~~fD~VlvD~ 412 (451)
.+|+|++||.||.++.+...-.+...|+++|+++..++..+.|... ..++++|+..+.... . ..+|+|+.+|
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~------~~~~~~Di~~~~~~~~~~~~~D~l~~gp 76 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH------TQLLAKTIEGITLEEFDRLSFDMILMSP 76 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT------SCEECSCGGGCCHHHHHHHCCSEEEECC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc------cccccCCHHHccHhHcCcCCcCEEEEcC
Confidence 4799999999999998877510013799999999999999998742 235678988764211 1 2699999999
Q ss_pred CCCCccccccC
Q 012998 413 PCSGLGVLSKR 423 (451)
Q Consensus 413 PCSg~G~lrr~ 423 (451)
||-+..+..++
T Consensus 77 PCq~fS~ag~~ 87 (343)
T 1g55_A 77 PCQPFTRIGRQ 87 (343)
T ss_dssp C----------
T ss_pred CCcchhhcCCc
Confidence 99998876544
No 285
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=97.83 E-value=1.3e-05 Score=79.80 Aligned_cols=79 Identities=13% Similarity=0.072 Sum_probs=60.3
Q ss_pred hhhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCC
Q 012998 324 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 403 (451)
Q Consensus 324 l~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~ 403 (451)
.+...++..++.+|||+|||+|..+..+++..+ ..+++++|+ +..+. +++++..+..++|+++.+|+... .+
T Consensus 175 ~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~~---~p- 246 (348)
T 3lst_A 175 ILARAGDFPATGTVADVGGGRGGFLLTVLREHP-GLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLRE---VP- 246 (348)
T ss_dssp HHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCT-TEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTTC---CC-
T ss_pred HHHHhCCccCCceEEEECCccCHHHHHHHHHCC-CCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCCC---CC-
Confidence 344555677889999999999999999999865 478999999 44444 55555567767799999998632 22
Q ss_pred CcCEEEE
Q 012998 404 KCDKVLL 410 (451)
Q Consensus 404 ~fD~Vlv 410 (451)
.||+|++
T Consensus 247 ~~D~v~~ 253 (348)
T 3lst_A 247 HADVHVL 253 (348)
T ss_dssp CCSEEEE
T ss_pred CCcEEEE
Confidence 7999986
No 286
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.74 E-value=5e-05 Score=81.53 Aligned_cols=77 Identities=18% Similarity=0.207 Sum_probs=62.3
Q ss_pred CCeEEeecCCCchH---HHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEE
Q 012998 334 GQSIVDCCAAPGGK---TLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 334 g~~VLDlcagpG~k---T~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
+..|||+|||+|-. ++.+++..+...+|+|||.|+ +...+++..+.+|..++|+++++|++++. .++++|+|+.
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~--LPEKVDIIVS 434 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWV--APEKADIIVS 434 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCC--CSSCEEEEEC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceecc--CCcccCEEEE
Confidence 35799999999988 555555543334799999997 56678888999999999999999999875 3578999998
Q ss_pred cCC
Q 012998 411 DAP 413 (451)
Q Consensus 411 D~P 413 (451)
..=
T Consensus 435 EwM 437 (637)
T 4gqb_A 435 ELL 437 (637)
T ss_dssp CCC
T ss_pred EcC
Confidence 764
No 287
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=97.69 E-value=1.7e-05 Score=72.88 Aligned_cols=64 Identities=9% Similarity=0.028 Sum_probs=48.2
Q ss_pred hhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCC
Q 012998 325 VVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVK 404 (451)
Q Consensus 325 ~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~ 404 (451)
+..+....++.+|||+|||+|..+..++ ..|+++|+++. + +.++.+|+..++ ...++
T Consensus 59 ~~~l~~~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~---------------~-~~~~~~d~~~~~-~~~~~ 115 (215)
T 2zfu_A 59 ARDLRQRPASLVVADFGCGDCRLASSIR------NPVHCFDLASL---------------D-PRVTVCDMAQVP-LEDES 115 (215)
T ss_dssp HHHHHTSCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS---------------S-TTEEESCTTSCS-CCTTC
T ss_pred HHHHhccCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC---------------C-ceEEEeccccCC-CCCCC
Confidence 3333344678899999999999887662 68999999988 1 456788988754 23568
Q ss_pred cCEEEEc
Q 012998 405 CDKVLLD 411 (451)
Q Consensus 405 fD~VlvD 411 (451)
||+|++.
T Consensus 116 fD~v~~~ 122 (215)
T 2zfu_A 116 VDVAVFC 122 (215)
T ss_dssp EEEEEEE
T ss_pred EeEEEEe
Confidence 9999974
No 288
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.48 E-value=3.2e-05 Score=74.48 Aligned_cols=82 Identities=21% Similarity=0.138 Sum_probs=51.3
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcC-ccccccccCCCCcCEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA-DLRTFADNSTVKCDKVL 409 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~-Da~~~~~~~~~~fD~Vl 409 (451)
++++.+|||+|||||+++..++..+ +...|+++|+.......... .+..|. +.+.+... |...+ ...++|+|+
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~-gv~sV~GvdvG~d~~~~pi~-~~~~g~-~ii~~~~~~dv~~l---~~~~~DvVL 161 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLK-NVKKVMAFTLGVQGHEKPIM-RTTLGW-NLIRFKDKTDVFNM---EVIPGDTLL 161 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCC-CCBTTG-GGEEEECSCCGGGS---CCCCCSEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhc-CCCeeeeEEeccCccccccc-cccCCC-ceEEeeCCcchhhc---CCCCcCEEE
Confidence 4578899999999999999888764 34679999998653221110 011232 23444332 44433 247899999
Q ss_pred EcCCCCCccc
Q 012998 410 LDAPCSGLGV 419 (451)
Q Consensus 410 vD~PCSg~G~ 419 (451)
+|.-=+ +|.
T Consensus 162 SDmApn-sG~ 170 (282)
T 3gcz_A 162 CDIGES-SPS 170 (282)
T ss_dssp ECCCCC-CSC
T ss_pred ecCccC-CCC
Confidence 994333 554
No 289
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.45 E-value=0.00013 Score=78.53 Aligned_cols=79 Identities=11% Similarity=0.072 Sum_probs=60.2
Q ss_pred CCeEEeecCCCchHHHHHHHH---cC---------CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc-
Q 012998 334 GQSIVDCCAAPGGKTLYMASC---LS---------GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN- 400 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~---~~---------~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~- 400 (451)
+..|||+|||+|-.+...+.. .+ ...+|+|||.|+.....++.... +|..++|+++++|++++...
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 357999999999997533222 22 23499999999988877666654 78888899999999988531
Q ss_pred ---CCCCcCEEEEcCC
Q 012998 401 ---STVKCDKVLLDAP 413 (451)
Q Consensus 401 ---~~~~fD~VlvD~P 413 (451)
..+++|+|+..--
T Consensus 489 ~~~~~ekVDIIVSElm 504 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELL 504 (745)
T ss_dssp HHTTCCCCSEEEECCC
T ss_pred ccCCCCcccEEEEecc
Confidence 1478999998876
No 290
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=97.45 E-value=0.00017 Score=72.00 Aligned_cols=80 Identities=14% Similarity=0.061 Sum_probs=62.1
Q ss_pred hhhhhCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCC
Q 012998 325 VVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVK 404 (451)
Q Consensus 325 ~~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~ 404 (451)
+....+..+..+|+|+|||+|..+..+++..+ ..+++..|. +..++.+++++...+. ++|+++.+|+...+ ...
T Consensus 171 ~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p-~~~~~~~dl-p~v~~~a~~~~~~~~~-~rv~~~~gD~~~~~---~~~ 244 (353)
T 4a6d_A 171 VLTAFDLSVFPLMCDLGGGAGALAKECMSLYP-GCKITVFDI-PEVVWTAKQHFSFQEE-EQIDFQEGDFFKDP---LPE 244 (353)
T ss_dssp HHHSSCGGGCSEEEEETCTTSHHHHHHHHHCS-SCEEEEEEC-HHHHHHHHHHSCC--C-CSEEEEESCTTTSC---CCC
T ss_pred HHHhcCcccCCeEEeeCCCCCHHHHHHHHhCC-CceeEeccC-HHHHHHHHHhhhhccc-CceeeecCccccCC---CCC
Confidence 34445566778999999999999999999865 468888897 8899999999876664 46999999987542 235
Q ss_pred cCEEEE
Q 012998 405 CDKVLL 410 (451)
Q Consensus 405 fD~Vlv 410 (451)
+|+|++
T Consensus 245 ~D~~~~ 250 (353)
T 4a6d_A 245 ADLYIL 250 (353)
T ss_dssp CSEEEE
T ss_pred ceEEEe
Confidence 788876
No 291
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.44 E-value=0.00012 Score=70.83 Aligned_cols=81 Identities=17% Similarity=0.136 Sum_probs=56.6
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcC-ccccccccCCCCcCEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA-DLRTFADNSTVKCDKVL 409 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~-Da~~~~~~~~~~fD~Vl 409 (451)
+++++.|||+||||||++..++...+ ...|+|+|+...-.+.- ...+.+|.. .|++..+ |+..+.+ .++|.|+
T Consensus 92 l~~~~~VlDLGaapGGwsq~~~~~~g-v~~V~avdvG~~~he~P-~~~~ql~w~-lV~~~~~~Dv~~l~~---~~~D~iv 165 (321)
T 3lkz_A 92 LEPVGKVIDLGCGRGGWCYYMATQKR-VQEVRGYTKGGPGHEEP-QLVQSYGWN-IVTMKSGVDVFYRPS---ECCDTLL 165 (321)
T ss_dssp CCCCEEEEEETCTTCHHHHHHTTCTT-EEEEEEECCCSTTSCCC-CCCCBTTGG-GEEEECSCCTTSSCC---CCCSEEE
T ss_pred CCCCCEEEEeCCCCCcHHHHHHhhcC-CCEEEEEEcCCCCccCc-chhhhcCCc-ceEEEeccCHhhCCC---CCCCEEE
Confidence 46788999999999999998877643 45899999976522100 001233433 3788887 8877764 5699999
Q ss_pred EcCCCCCcc
Q 012998 410 LDAPCSGLG 418 (451)
Q Consensus 410 vD~PCSg~G 418 (451)
||.- -.+|
T Consensus 166 cDig-eSs~ 173 (321)
T 3lkz_A 166 CDIG-ESSS 173 (321)
T ss_dssp ECCC-CCCS
T ss_pred EECc-cCCC
Confidence 9987 3444
No 292
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.44 E-value=0.00033 Score=68.25 Aligned_cols=80 Identities=10% Similarity=0.141 Sum_probs=66.3
Q ss_pred CCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHc--CC--CceEEEEcCccccccccCCCCcCEEE
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--QV--NSVIRTIHADLRTFADNSTVKCDKVL 409 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~--g~--~~~I~~~~~Da~~~~~~~~~~fD~Vl 409 (451)
..+||=+|.|-|+.+..++..- +..+|+.||+++..++.+++.+... |. +.+++++.+|+..+.....++||+|+
T Consensus 84 pk~VLIiGgGdG~~~revlk~~-~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi 162 (294)
T 3o4f_A 84 AKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp CCEEEEESCTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEE
T ss_pred CCeEEEECCCchHHHHHHHHcC-CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEE
Confidence 4699999999999998887753 3468999999999999999987543 21 24699999999998776678999999
Q ss_pred EcCCC
Q 012998 410 LDAPC 414 (451)
Q Consensus 410 vD~PC 414 (451)
+|.+-
T Consensus 163 ~D~~d 167 (294)
T 3o4f_A 163 SDCTD 167 (294)
T ss_dssp ESCCC
T ss_pred EeCCC
Confidence 99874
No 293
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=97.39 E-value=0.00017 Score=71.80 Aligned_cols=67 Identities=21% Similarity=0.206 Sum_probs=53.4
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
..++.+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++ ..+ |+++.+|+.. + . + .||+|++
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~~-v~~~~~d~~~-~-~-p-~~D~v~~ 252 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFP-KLKCIVFDR-PQVVENLSG------SNN-LTYVGGDMFT-S-I-P-NADAVLL 252 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC------BTT-EEEEECCTTT-C-C-C-CCSEEEE
T ss_pred cccCceEEEeCCCccHHHHHHHHHCC-CCeEEEeeC-HHHHhhccc------CCC-cEEEeccccC-C-C-C-CccEEEe
Confidence 34678999999999999999998864 478999999 988887654 234 8999999865 2 1 2 3999987
No 294
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.38 E-value=9.7e-05 Score=64.37 Aligned_cols=64 Identities=14% Similarity=0.109 Sum_probs=48.8
Q ss_pred CCCCeEEeecCCCc-hHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEE-E
Q 012998 332 QPGQSIVDCCAAPG-GKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKV-L 409 (451)
Q Consensus 332 ~~g~~VLDlcagpG-~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~V-l 409 (451)
.++.+|||+|||+| ..+..|++.. +..|+|+|+++..+. +++.|..+.....-..||+| .
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~--g~~V~atDInp~Av~----------------~v~dDiF~P~~~~Y~~~DLIYs 95 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHS--KVDLVLTDIKPSHGG----------------IVRDDITSPRMEIYRGAALIYS 95 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHS--CCEEEEECSSCSSTT----------------EECCCSSSCCHHHHTTEEEEEE
T ss_pred CCCCcEEEEccCCChHHHHHHHHhC--CCeEEEEECCccccc----------------eEEccCCCCcccccCCcCEEEE
Confidence 45789999999999 5888888742 357999999998777 67788876432111479999 7
Q ss_pred EcCC
Q 012998 410 LDAP 413 (451)
Q Consensus 410 vD~P 413 (451)
+.||
T Consensus 96 irPP 99 (153)
T 2k4m_A 96 IRPP 99 (153)
T ss_dssp ESCC
T ss_pred cCCC
Confidence 8887
No 295
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.32 E-value=0.00026 Score=71.08 Aligned_cols=67 Identities=13% Similarity=0.103 Sum_probs=53.6
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
..++.+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++ ..+ |+++.+|+.. + . +. ||+|++
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~------~~~-v~~~~~d~~~-~-~-~~-~D~v~~ 273 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYP-LIKGINFDL-PQVIENAPP------LSG-IEHVGGDMFA-S-V-PQ-GDAMIL 273 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC------CTT-EEEEECCTTT-C-C-CC-EEEEEE
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCC-CCeEEEeCh-HHHHHhhhh------cCC-CEEEeCCccc-C-C-CC-CCEEEE
Confidence 55678999999999999999999864 478999999 888876553 234 8999999876 2 2 23 899987
No 296
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.30 E-value=4.9e-05 Score=73.10 Aligned_cols=83 Identities=17% Similarity=0.154 Sum_probs=49.4
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
++++.+|||+|||||+++..+++..+ .+.|+|+|+.......... ....|. +.++ +..++... ....++||+|++
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~-~~~v~g~dVGvDl~~~pi~-~~~~g~-~ii~-~~~~~dv~-~l~~~~~DlVls 146 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKE-VSGVKGFTLGRDGHEKPMN-VQSLGW-NIIT-FKDKTDIH-RLEPVKCDTLLC 146 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTCCCCCC-CCBTTG-GGEE-EECSCCTT-TSCCCCCSEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcC-CCcceeEEEeccCcccccc-cCcCCC-CeEE-Eeccceeh-hcCCCCccEEEe
Confidence 46788999999999999998877532 4578888887442100000 011122 3344 44443221 123468999999
Q ss_pred cCCCCCccc
Q 012998 411 DAPCSGLGV 419 (451)
Q Consensus 411 D~PCSg~G~ 419 (451)
|.-=+ +|.
T Consensus 147 D~apn-sG~ 154 (277)
T 3evf_A 147 DIGES-SSS 154 (277)
T ss_dssp CCCCC-CSC
T ss_pred cCccC-cCc
Confidence 95323 554
No 297
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.27 E-value=6.5e-05 Score=72.83 Aligned_cols=81 Identities=15% Similarity=0.072 Sum_probs=51.0
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcC-ccccccccCCCCcCEEEE
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA-DLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~-Da~~~~~~~~~~fD~Vlv 410 (451)
.+|.+|||+||||||++-.+++.++ ...|+++|+.......... .+..+. +.+.+..+ |+..+ ..+.+|+|++
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~g-v~sV~Gvdlg~~~~~~P~~-~~~~~~-~iv~~~~~~di~~l---~~~~~DlVls 153 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQKE-VMSVKGYTLGIEGHEKPIH-MQTLGW-NIVKFKDKSNVFTM---PTEPSDTLLC 153 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCC-CCBTTG-GGEEEECSCCTTTS---CCCCCSEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhcC-CceeeeEEecccccccccc-ccccCC-ceEEeecCceeeec---CCCCcCEEee
Confidence 4799999999999999999987643 4578999997542110000 001122 22333322 43333 2468999999
Q ss_pred cCCCCCccc
Q 012998 411 DAPCSGLGV 419 (451)
Q Consensus 411 D~PCSg~G~ 419 (451)
|.-.+ +|.
T Consensus 154 D~APn-sG~ 161 (300)
T 3eld_A 154 DIGES-SSN 161 (300)
T ss_dssp CCCCC-CSS
T ss_pred cCcCC-CCC
Confidence 97777 776
No 298
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=97.22 E-value=0.00032 Score=70.49 Aligned_cols=67 Identities=10% Similarity=0.088 Sum_probs=52.1
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
..++.+|||+|||+|..+..+++..+ ..+++++|+ +.+++.++++ . +|+++.+|+.+ + .. .. |+|++
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~------~-~v~~~~~d~~~-~-~p-~~-D~v~~ 267 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYP-SINAINFDL-PHVIQDAPAF------S-GVEHLGGDMFD-G-VP-KG-DAIFI 267 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCCC------T-TEEEEECCTTT-C-CC-CC-SEEEE
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEeh-HHHHHhhhhc------C-CCEEEecCCCC-C-CC-CC-CEEEE
Confidence 55678999999999999999999864 478999999 8887765431 3 48999999876 2 22 22 88886
No 299
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.22 E-value=0.00074 Score=65.76 Aligned_cols=59 Identities=10% Similarity=0.076 Sum_probs=45.9
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcc
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL 394 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da 394 (451)
.+|+.|||.|||+|..+..++.+ +.+++++|+++.+++.++++++...-...+ .+.+|+
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~---g~~~~g~e~~~~~~~~a~~r~~~~~~~~~~-~~~~~~ 292 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW---GRRALGVELVPRYAQLAKERFAREVPGFSL-EVLDGA 292 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHSTTCCE-EEECC-
T ss_pred CCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHHhccccch-hhCCcc
Confidence 68999999999999988877664 368999999999999999999876433223 334444
No 300
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=97.18 E-value=0.00039 Score=69.78 Aligned_cols=67 Identities=12% Similarity=0.092 Sum_probs=52.3
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
..++.+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++ .. +|+++.+|+.. + .. .. |+|++
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~-~v~~~~~D~~~-~-~p-~~-D~v~~ 265 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYP-TIKGVNFDL-PHVISEAPQ------FP-GVTHVGGDMFK-E-VP-SG-DTILM 265 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC------CT-TEEEEECCTTT-C-CC-CC-SEEEE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCC-CCeEEEecC-HHHHHhhhh------cC-CeEEEeCCcCC-C-CC-CC-CEEEe
Confidence 56778999999999999999999865 478999999 887766543 13 48999999876 2 22 22 98886
No 301
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=97.14 E-value=0.00085 Score=66.04 Aligned_cols=80 Identities=15% Similarity=0.300 Sum_probs=63.0
Q ss_pred CeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEEcCCC
Q 012998 335 QSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPC 414 (451)
Q Consensus 335 ~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD~PC 414 (451)
.+|||++||.||.++-+-+. +--.|.|+|+++..++..+.|. .+ .++.+|..++....-..+|+++.=|||
T Consensus 1 mkvidLFsG~GG~~~G~~~a--G~~~v~a~e~d~~a~~ty~~N~-----~~--~~~~~DI~~i~~~~~~~~D~l~ggpPC 71 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA--GFRIICANEYDKSIWKTYESNH-----SA--KLIKGDISKISSDEFPKCDGIIGGPPS 71 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT--TCEEEEEEECCTTTHHHHHHHC-----CS--EEEESCGGGCCGGGSCCCSEEECCCCG
T ss_pred CeEEEeCcCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHHC-----CC--CcccCChhhCCHhhCCcccEEEecCCC
Confidence 47999999999999877553 2346889999999999988875 22 457899988765444579999999999
Q ss_pred CCccccccC
Q 012998 415 SGLGVLSKR 423 (451)
Q Consensus 415 Sg~G~lrr~ 423 (451)
-+.-+..++
T Consensus 72 Q~fS~ag~~ 80 (331)
T 3ubt_Y 72 QSWSEGGSL 80 (331)
T ss_dssp GGTEETTEE
T ss_pred CCcCCCCCc
Confidence 998776653
No 302
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.08 E-value=0.00094 Score=66.81 Aligned_cols=81 Identities=9% Similarity=0.089 Sum_probs=60.5
Q ss_pred Cceeeecch-hhhhhhhhCCCC------CCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 313 GLCAVQDES-AGLVVAVVDPQP------GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 313 G~~~vQd~a-s~l~~~~l~~~~------g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
|+-.+.|+. ..-++..+++.+ ++.|||+|.|+|..|..|++... ..+|+|+|+++..+..+++.+ . ..
T Consensus 31 GQnFL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~-~~~vvavE~D~~l~~~L~~~~-~--~~- 105 (353)
T 1i4w_A 31 GFKYLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYC-PRQYSLLEKRSSLYKFLNAKF-E--GS- 105 (353)
T ss_dssp GCCCBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHC-CSEEEEECCCHHHHHHHHHHT-T--TS-
T ss_pred CcCccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCC-CCEEEEEecCHHHHHHHHHhc-c--CC-
Confidence 333333433 344556666653 68999999999999999998643 368999999999999998877 2 23
Q ss_pred eEEEEcCcccccc
Q 012998 386 VIRTIHADLRTFA 398 (451)
Q Consensus 386 ~I~~~~~Da~~~~ 398 (451)
+++++++|+..+.
T Consensus 106 ~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 106 PLQILKRDPYDWS 118 (353)
T ss_dssp SCEEECSCTTCHH
T ss_pred CEEEEECCccchh
Confidence 4899999997654
No 303
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=97.04 E-value=0.0018 Score=63.19 Aligned_cols=83 Identities=12% Similarity=0.114 Sum_probs=61.8
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCce-EEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccC---CCCcCE
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGL-VYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS---TVKCDK 407 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~-V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~---~~~fD~ 407 (451)
..+.+|+|++||.||.++-+... +-... |+++|+++..++..+.|.. + ..++.+|..++.... .+.+|+
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~~-----~-~~~~~~DI~~i~~~~i~~~~~~Dl 86 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRHQ-----G-KIMYVGDVRSVTQKHIQEWGPFDL 86 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHTT-----T-CEEEECCGGGCCHHHHHHTCCCSE
T ss_pred CCCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhCC-----C-CceeCCChHHccHHHhcccCCcCE
Confidence 34568999999999999877664 21112 6999999999998887752 2 245678988764321 146999
Q ss_pred EEEcCCCCCccccc
Q 012998 408 VLLDAPCSGLGVLS 421 (451)
Q Consensus 408 VlvD~PCSg~G~lr 421 (451)
|+..|||-+.-+..
T Consensus 87 l~ggpPCQ~fS~ag 100 (295)
T 2qrv_A 87 VIGGSPCNDLSIVN 100 (295)
T ss_dssp EEECCCCGGGBTTC
T ss_pred EEecCCCccccccC
Confidence 99999999987764
No 304
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=97.01 E-value=0.00065 Score=67.33 Aligned_cols=76 Identities=16% Similarity=0.270 Sum_probs=57.2
Q ss_pred CCeEEeecCCCchHHHHHHHHcCC-CceE-EEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccC--CCCcCEEE
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLV-YAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS--TVKCDKVL 409 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~-~g~V-~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~--~~~fD~Vl 409 (451)
.-+|+|++||.||.+.-+... +- .-.| .|+|+++..++..+.|.... ++++|..++.... ...+|+++
T Consensus 10 ~~~vidLFaG~GG~~~G~~~a-G~~~~~v~~a~e~d~~a~~ty~~N~~~~-------~~~~DI~~~~~~~i~~~~~Dil~ 81 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERS-SININATFIPFDINEIANKIYSKNFKEE-------VQVKNLDSISIKQIESLNCNTWF 81 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHS-SCCCCEEEEEECCCHHHHHHHHHHHCCC-------CBCCCTTTCCHHHHHHTCCCEEE
T ss_pred CCEEEEECCChhHHHHHHHHc-CCCceEEEEEEECCHHHHHHHHHHCCCC-------cccCChhhcCHHHhccCCCCEEE
Confidence 358999999999999887654 21 1346 79999999999999886321 4567877664311 12699999
Q ss_pred EcCCCCCc
Q 012998 410 LDAPCSGL 417 (451)
Q Consensus 410 vD~PCSg~ 417 (451)
..|||-+.
T Consensus 82 ggpPCQ~f 89 (327)
T 3qv2_A 82 MSPPCQPY 89 (327)
T ss_dssp ECCCCTTC
T ss_pred ecCCccCc
Confidence 99999998
No 305
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.01 E-value=0.00068 Score=67.53 Aligned_cols=68 Identities=19% Similarity=0.188 Sum_probs=53.3
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEE
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
..++.+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++ ..+ |+++.+|+.. + . + .||+|++
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~~-v~~~~~d~~~-~-~-~-~~D~v~~ 257 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIFP-HLKCTVFDQ-PQVVGNLTG------NEN-LNFVGGDMFK-S-I-P-SADAVLL 257 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHCT-TSEEEEEEC-HHHHSSCCC------CSS-EEEEECCTTT-C-C-C-CCSEEEE
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEecc-HHHHhhccc------CCC-cEEEeCccCC-C-C-C-CceEEEE
Confidence 34678999999999999999999864 478999999 788765543 344 8999999876 2 2 2 4999997
Q ss_pred c
Q 012998 411 D 411 (451)
Q Consensus 411 D 411 (451)
-
T Consensus 258 ~ 258 (358)
T 1zg3_A 258 K 258 (358)
T ss_dssp E
T ss_pred c
Confidence 3
No 306
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.96 E-value=0.002 Score=65.76 Aligned_cols=66 Identities=17% Similarity=0.185 Sum_probs=52.8
Q ss_pred hhCCCCCCeEEeecCCCchHHHHHH-HHcCCCceEEEEeCCHHHHHHHHHHHHH---cCCCceEEEEcCc
Q 012998 328 VVDPQPGQSIVDCCAAPGGKTLYMA-SCLSGQGLVYAIDINKGRLRILNETAKL---HQVNSVIRTIHAD 393 (451)
Q Consensus 328 ~l~~~~g~~VLDlcagpG~kT~~la-~~~~~~g~V~AvDi~~~rl~~l~~~~~~---~g~~~~I~~~~~D 393 (451)
++.+.+|+.|+|+||+.|..|..++ ...++.++|+|+|.++...+.+++|++. .+...+|++++.-
T Consensus 221 i~~l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~a 290 (409)
T 2py6_A 221 LLRFSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCG 290 (409)
T ss_dssp SCCCCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSE
T ss_pred ccccCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeE
Confidence 3456789999999999999999988 4544458999999999999999999998 2451347776544
No 307
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.95 E-value=0.00084 Score=66.69 Aligned_cols=80 Identities=16% Similarity=0.266 Sum_probs=60.0
Q ss_pred eEEeecCCCchHHHHHHHHcCCC-ceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccC--CCCcCEEEEcC
Q 012998 336 SIVDCCAAPGGKTLYMASCLSGQ-GLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS--TVKCDKVLLDA 412 (451)
Q Consensus 336 ~VLDlcagpG~kT~~la~~~~~~-g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~--~~~fD~VlvD~ 412 (451)
+|+|++||.||.+.-+... +-. -.|.|+|+++..++..+.|... ..++++|..++.... ...+|+++..|
T Consensus 5 ~~idLFaG~GG~~~G~~~a-G~~~~~v~a~e~d~~a~~ty~~N~~~------~~~~~~DI~~~~~~~~~~~~~D~l~ggp 77 (333)
T 4h0n_A 5 KILELYSGIGGMHCAWKES-GLDGEIVAAVDINTVANSVYKHNFPE------TNLLNRNIQQLTPQVIKKWNVDTILMSP 77 (333)
T ss_dssp EEEEETCTTTHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHCTT------SCEECCCGGGCCHHHHHHTTCCEEEECC
T ss_pred EEEEECcCccHHHHHHHHc-CCCceEEEEEeCCHHHHHHHHHhCCC------CceeccccccCCHHHhccCCCCEEEecC
Confidence 7999999999999888665 211 3588999999999999888642 224678887764321 13699999999
Q ss_pred CCCCcccccc
Q 012998 413 PCSGLGVLSK 422 (451)
Q Consensus 413 PCSg~G~lrr 422 (451)
||-+.-...+
T Consensus 78 PCQ~fS~ag~ 87 (333)
T 4h0n_A 78 PCQPFTRNGK 87 (333)
T ss_dssp CCCCSEETTE
T ss_pred CCcchhhhhh
Confidence 9998866544
No 308
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=96.89 E-value=0.00031 Score=62.27 Aligned_cols=60 Identities=13% Similarity=0.135 Sum_probs=48.0
Q ss_pred hCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc--cCCCCcC
Q 012998 329 VDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD--NSTVKCD 406 (451)
Q Consensus 329 l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~--~~~~~fD 406 (451)
+.+.+|++|||+|||. +++|+++.|++.+++++.. + ++++++|+..++. ..+++||
T Consensus 8 ~g~~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~----~-~~~~~~d~~~~~~~~~~~~~fD 65 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGN----E-GRVSVENIKQLLQSAHKESSFD 65 (176)
T ss_dssp TTCCTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTT----T-SEEEEEEGGGGGGGCCCSSCEE
T ss_pred cCCCCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhccc----C-cEEEEechhcCccccCCCCCEe
Confidence 4678999999999985 2389999999999988643 2 6788999988763 1457899
Q ss_pred EEEE
Q 012998 407 KVLL 410 (451)
Q Consensus 407 ~Vlv 410 (451)
+|++
T Consensus 66 ~V~~ 69 (176)
T 2ld4_A 66 IILS 69 (176)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9997
No 309
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.78 E-value=0.0017 Score=65.36 Aligned_cols=79 Identities=11% Similarity=0.120 Sum_probs=61.8
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcC---C----CceEEEEcCcccccccc---CC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQ---V----NSVIRTIHADLRTFADN---ST 402 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g---~----~~~I~~~~~Da~~~~~~---~~ 402 (451)
+..+||=+|.|-|+....+... +..+|+.||+++..++.+++.+.... . ..+++++.+|+..+... ..
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh--~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL--KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 282 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT--CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCeEEEECCCcHHHHHHHHhc--CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc
Confidence 4679999999999998888765 34789999999999999998864321 1 12488999999887532 24
Q ss_pred CCcCEEEEcCC
Q 012998 403 VKCDKVLLDAP 413 (451)
Q Consensus 403 ~~fD~VlvD~P 413 (451)
++||+|++|.+
T Consensus 283 ~~yDvIIvDl~ 293 (381)
T 3c6k_A 283 REFDYVINDLT 293 (381)
T ss_dssp CCEEEEEEECC
T ss_pred CceeEEEECCC
Confidence 68999999965
No 310
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.77 E-value=0.0018 Score=61.80 Aligned_cols=49 Identities=14% Similarity=0.240 Sum_probs=40.3
Q ss_pred CCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCC
Q 012998 332 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQV 383 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~ 383 (451)
.+|+.|||.+||+|..+..+..+ +.+++++|+++..++.++++++..++
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~---gr~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKL---GRNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC---
T ss_pred CCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHhccC
Confidence 68999999999999877766554 36899999999999999999987765
No 311
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=96.64 E-value=0.0023 Score=66.56 Aligned_cols=84 Identities=19% Similarity=0.268 Sum_probs=58.3
Q ss_pred CCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc-------------
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN------------- 400 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~------------- 400 (451)
.-+|+|+|||.||.++-+... +--.|+|+|+++..++..+.|..... + ..++++|+..+...
T Consensus 88 ~~~viDLFaG~GGlslG~~~a--G~~~v~avE~d~~A~~ty~~N~~~~p--~-~~~~~~DI~~i~~~~~~~~~~~~~~~~ 162 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI--GGQCVFTSEWNKHAVRTYKANHYCDP--A-THHFNEDIRDITLSHQEGVSDEAAAEH 162 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT--TEEEEEEECCCHHHHHHHHHHSCCCT--T-TCEEESCTHHHHCTTCTTSCHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHhcccCC--C-cceeccchhhhhhccccccchhhHHhh
Confidence 458999999999999877553 22358999999999999888763211 1 23466888776421
Q ss_pred ---CCCCcCEEEEcCCCCCcccccc
Q 012998 401 ---STVKCDKVLLDAPCSGLGVLSK 422 (451)
Q Consensus 401 ---~~~~fD~VlvD~PCSg~G~lrr 422 (451)
....+|+|+.-|||-+.-+..+
T Consensus 163 i~~~~~~~Dvl~gGpPCQ~FS~AG~ 187 (482)
T 3me5_A 163 IRQHIPEHDVLLAGFPCQPFSLAGV 187 (482)
T ss_dssp HHHHSCCCSEEEEECCCCCC-----
T ss_pred hhhcCCCCCEEEecCCCcchhhhCc
Confidence 1246899999999999877653
No 312
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.51 E-value=0.0049 Score=59.55 Aligned_cols=73 Identities=18% Similarity=0.104 Sum_probs=51.6
Q ss_pred hCCCCCCeEEeecC------CCchHHHHHHHHcCCC-ceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccC
Q 012998 329 VDPQPGQSIVDCCA------APGGKTLYMASCLSGQ-GLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS 401 (451)
Q Consensus 329 l~~~~g~~VLDlca------gpG~kT~~la~~~~~~-g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~ 401 (451)
+.+.-|++|||+|| +||+. .+.+. .+. +.|+++|+.+--. ..+ .++++|...+..
T Consensus 105 ~~vp~gmrVLDLGA~s~kg~APGS~--VLr~~-~p~g~~VVavDL~~~~s-----------da~--~~IqGD~~~~~~-- 166 (344)
T 3r24_A 105 LAVPYNMRVIHFGAGSDKGVAPGTA--VLRQW-LPTGTLLVDSDLNDFVS-----------DAD--STLIGDCATVHT-- 166 (344)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHHH--HHHHH-SCTTCEEEEEESSCCBC-----------SSS--EEEESCGGGEEE--
T ss_pred EeecCCCEEEeCCCCCCCCCCCcHH--HHHHh-CCCCcEEEEeeCccccc-----------CCC--eEEEcccccccc--
Confidence 34566999999997 99993 34444 555 5999999986331 122 358999876543
Q ss_pred CCCcCEEEEcCCCCCccc
Q 012998 402 TVKCDKVLLDAPCSGLGV 419 (451)
Q Consensus 402 ~~~fD~VlvD~PCSg~G~ 419 (451)
..+||+|+.|.-..-+|.
T Consensus 167 ~~k~DLVISDMAPNtTG~ 184 (344)
T 3r24_A 167 ANKWDLIISDMYDPRTKH 184 (344)
T ss_dssp SSCEEEEEECCCCTTSCS
T ss_pred CCCCCEEEecCCCCcCCc
Confidence 478999999966566666
No 313
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=95.51 E-value=0.022 Score=57.93 Aligned_cols=90 Identities=9% Similarity=0.061 Sum_probs=60.7
Q ss_pred CeEEeecCCCchHHHHHHHHcCCCce----EEEEeCCHHHHHHHHHHHHHcCCC--ce----------------------
Q 012998 335 QSIVDCCAAPGGKTLYMASCLSGQGL----VYAIDINKGRLRILNETAKLHQVN--SV---------------------- 386 (451)
Q Consensus 335 ~~VLDlcagpG~kT~~la~~~~~~g~----V~AvDi~~~rl~~l~~~~~~~g~~--~~---------------------- 386 (451)
-+|||+|||.||.+..+-..-.+-.. |.++|+++..+...+.|....+.. ..
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~~~~~~~~~~~~~l~~~s~d~k~~~~~~~i~ 90 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSKNFNPKIERLDRDILSISNDSKMPISEYGIK 90 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCSSCCCCCBCCCTTCCCCBSSSSSCCCHHHHH
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCCCcccchhhhhhhhhhccccccccccccccc
Confidence 48999999999998887664110123 899999999999988887532100 00
Q ss_pred ------EE----------EEcCccccccccC-CCCcCEEEEcCCCCCccccccCC
Q 012998 387 ------IR----------TIHADLRTFADNS-TVKCDKVLLDAPCSGLGVLSKRA 424 (451)
Q Consensus 387 ------I~----------~~~~Da~~~~~~~-~~~fD~VlvD~PCSg~G~lrr~p 424 (451)
+. ...+|.+.+.... ++.+|+++.=|||-+.....++.
T Consensus 91 ~l~~~~l~~i~~~~~~~~~~~~DI~~i~~~~ip~~vDll~ggpPCQ~fS~ag~~~ 145 (403)
T 4dkj_A 91 KINNTIKASYLNYAKKHFNNLFDIKKVNKDNFPKNIDIFTYSFPCQDLSVQGLQK 145 (403)
T ss_dssp HHTTBHHHHHHHHHHHHSCBCCCGGGCCTTTSCSSCSEEEECCCCTTTCTTSCCC
T ss_pred cccHHHHHHHHhhcccCCCcccchhhcCHhhCCCCCcEEEEeCCCCCHHHhCCCC
Confidence 00 0246777664322 34579999999999887766543
No 314
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=94.71 E-value=0.084 Score=59.44 Aligned_cols=81 Identities=12% Similarity=0.202 Sum_probs=58.3
Q ss_pred CCeEEeecCCCchHHHHHHHHcCCC-ceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccc------------c-
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSGQ-GLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA------------D- 399 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~~-g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~------------~- 399 (451)
.-+++|++||.||.++-+... +- -.|.|+|+++..++..+.|.. + ..++.+|...+. .
T Consensus 540 ~l~~iDLFaG~GGlslGl~~A--G~~~vv~avEid~~A~~ty~~N~p-----~-~~~~~~DI~~l~~~~~~~di~~~~~~ 611 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQA--GISDTLWAIEMWDPAAQAFRLNNP-----G-STVFTEDCNILLKLVMAGETTNSRGQ 611 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHH--TSEEEEEEECSSHHHHHHHHHHCT-----T-SEEECSCHHHHHHHHHHTCSBCTTCC
T ss_pred CCeEEEeccCccHHHHHHHHC--CCCceEEEEECCHHHHHHHHHhCC-----C-CccccccHHHHhhhccchhhhhhhhh
Confidence 347999999999999888664 21 258899999999998888752 2 235566654331 0
Q ss_pred -c-CCCCcCEEEEcCCCCCcccccc
Q 012998 400 -N-STVKCDKVLLDAPCSGLGVLSK 422 (451)
Q Consensus 400 -~-~~~~fD~VlvD~PCSg~G~lrr 422 (451)
. ..+.+|+|+.-|||-+.-...+
T Consensus 612 ~lp~~~~vDll~GGpPCQ~FS~ag~ 636 (1002)
T 3swr_A 612 RLPQKGDVEMLCGGPPCQGFSGMNR 636 (1002)
T ss_dssp BCCCTTTCSEEEECCCCTTCCSSSC
T ss_pred hcccCCCeeEEEEcCCCcchhhhCC
Confidence 0 1246899999999999876654
No 315
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=94.04 E-value=0.046 Score=59.23 Aligned_cols=98 Identities=10% Similarity=0.050 Sum_probs=62.7
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC---------C--CceEEEEeCCHHHHHHHHHHH--------------HHc-----C
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS---------G--QGLVYAIDINKGRLRILNETA--------------KLH-----Q 382 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~---------~--~g~V~AvDi~~~rl~~l~~~~--------------~~~-----g 382 (451)
+.-+|+|+|-|+|...+.+.+... . .-+++++|..+-..+.+++.+ +.. |
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 446899999999999888876531 1 147999999664444444322 111 1
Q ss_pred -----CCc---eEEEEcCccccccccC----CCCcCEEEEcCCCCCccccccCCcccccCCHhHHHHH
Q 012998 383 -----VNS---VIRTIHADLRTFADNS----TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEEL 438 (451)
Q Consensus 383 -----~~~---~I~~~~~Da~~~~~~~----~~~fD~VlvD~PCSg~G~lrr~pd~~~~~~~~~l~~l 438 (451)
+.+ .++++.+|+.+..+.. ...||.+++|+.... ++||++ +.+-+..|
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~-----~np~~w---~~~~~~~l 197 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPA-----KNPDMW---NEQLFNAM 197 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC-------CCTTC---SHHHHHHH
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCC-----CChhhh---hHHHHHHH
Confidence 221 4678889998765433 368999999997554 889854 44444443
No 316
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=93.83 E-value=0.15 Score=56.13 Aligned_cols=46 Identities=15% Similarity=0.114 Sum_probs=35.9
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCC----CceEEEEeCCHHHHHHHHHHH
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSG----QGLVYAIDINKGRLRILNETA 378 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~----~g~V~AvDi~~~rl~~l~~~~ 378 (451)
...+|||++||.||.++-+.+..+. --.+.|+|+++.+++..+.|.
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 3458999999999999877654210 026889999999999998884
No 317
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.77 E-value=0.063 Score=52.72 Aligned_cols=64 Identities=9% Similarity=0.041 Sum_probs=50.6
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD 399 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~ 399 (451)
..+|+.|||-+||+|..+.. |..+ +-+.+++|+++..++.+++++++.+.. ...++.|+..+..
T Consensus 250 ~~~~~~VlDpF~GsGtt~~a-a~~~--gr~~ig~e~~~~~~~~~~~r~~~~~~~--~~~~~~~~~~i~~ 313 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGLV-AERE--SRKWISFEMKPEYVAASAFRFLDNNIS--EEKITDIYNRILN 313 (323)
T ss_dssp CCTTCEEEETTCTTCHHHHH-HHHT--TCEEEEEESCHHHHHHHHGGGSCSCSC--HHHHHHHHHHHHT
T ss_pred CCCCCEEEECCCCCCHHHHH-HHHc--CCCEEEEeCCHHHHHHHHHHHHhcccc--hHHHHHHHHHHHc
Confidence 46899999999999985544 4444 358999999999999999999988875 4556777777653
No 318
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=93.55 E-value=0.087 Score=51.70 Aligned_cols=49 Identities=12% Similarity=0.050 Sum_probs=37.8
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCH---HHHHHHHHHHHHcC
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINK---GRLRILNETAKLHQ 382 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~---~rl~~l~~~~~~~g 382 (451)
..+|+.|||-+||+|..+.....+ +-+.+++|+++ ..++.+++++++.|
T Consensus 240 ~~~~~~vlDpF~GsGtt~~aa~~~---~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSGVTARVAIQE---GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp SCTTCEEEETTCTTCHHHHHHHHH---TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCCCEEEecCCCCCHHHHHHHHc---CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 368999999999999866555444 35799999999 99999999998876
No 319
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.43 E-value=0.12 Score=50.63 Aligned_cols=79 Identities=22% Similarity=0.270 Sum_probs=51.6
Q ss_pred hhCCCCCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcC
Q 012998 328 VVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCD 406 (451)
Q Consensus 328 ~l~~~~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD 406 (451)
...+++|++||-.|||+ |..++++|..++ .+|+++|.++++++.++ ++|.+..+.....|.........+.+|
T Consensus 161 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~~i~~~~~~~~~~~~~~~g~~d 234 (340)
T 3s2e_A 161 VTDTRPGQWVVISGIGGLGHVAVQYARAMG--LRVAAVDIDDAKLNLAR----RLGAEVAVNARDTDPAAWLQKEIGGAH 234 (340)
T ss_dssp TTTCCTTSEEEEECCSTTHHHHHHHHHHTT--CEEEEEESCHHHHHHHH----HTTCSEEEETTTSCHHHHHHHHHSSEE
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHH----HcCCCEEEeCCCcCHHHHHHHhCCCCC
Confidence 34678999999999876 778888888764 59999999999998764 478764222111122111110123688
Q ss_pred EEEEcC
Q 012998 407 KVLLDA 412 (451)
Q Consensus 407 ~VlvD~ 412 (451)
.|+..+
T Consensus 235 ~vid~~ 240 (340)
T 3s2e_A 235 GVLVTA 240 (340)
T ss_dssp EEEESS
T ss_pred EEEEeC
Confidence 887643
No 320
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=93.16 E-value=0.18 Score=58.36 Aligned_cols=81 Identities=12% Similarity=0.221 Sum_probs=57.8
Q ss_pred CCeEEeecCCCchHHHHHHHHcCCC-ceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc-------------
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSGQ-GLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD------------- 399 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~~-g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~------------- 399 (451)
..+|+|++||.||.++-+-.. +- -.|.|+|+++..++..+.|.. + ..++.+|...+..
T Consensus 851 ~l~viDLFsG~GGlslGfe~A--G~~~vv~avEid~~A~~ty~~N~p-----~-~~~~~~DI~~l~~~~~~gdi~~~~~~ 922 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQA--GISETLWAIEMWDPAAQAFRLNNP-----G-TTVFTEDCNVLLKLVMAGEVTNSLGQ 922 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHT--TSEEEEEEECCSHHHHHHHHHHCT-----T-SEEECSCHHHHHHHHTTTCSBCSSCC
T ss_pred CceEEecccCccHHHHHHHHC--CCCceEEEEECCHHHHHHHHHhCC-----C-CcEeeccHHHHhHhhhccchhhhhhh
Confidence 457999999999999887653 11 258899999999999888752 2 2345566543210
Q ss_pred c--CCCCcCEEEEcCCCCCcccccc
Q 012998 400 N--STVKCDKVLLDAPCSGLGVLSK 422 (451)
Q Consensus 400 ~--~~~~fD~VlvD~PCSg~G~lrr 422 (451)
. ..+.+|+|+.-|||-+.-...+
T Consensus 923 ~lp~~~~vDvl~GGpPCQ~FS~agr 947 (1330)
T 3av4_A 923 RLPQKGDVEMLCGGPPCQGFSGMNR 947 (1330)
T ss_dssp BCCCTTTCSEEEECCCCTTTCSSSC
T ss_pred hccccCccceEEecCCCcccccccc
Confidence 0 1246899999999999876654
No 321
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=92.08 E-value=0.22 Score=49.36 Aligned_cols=53 Identities=23% Similarity=0.314 Sum_probs=40.9
Q ss_pred hhCCCCCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 328 VVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 328 ~l~~~~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
..++++|++||-+|||+ |..++++|..++ ...|+++|.++++++.++ .+|.+.
T Consensus 185 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~ 238 (371)
T 1f8f_A 185 ALKVTPASSFVTWGAGAVGLSALLAAKVCG-ASIIIAVDIVESRLELAK----QLGATH 238 (371)
T ss_dssp TTCCCTTCEEEEESCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHH----HHTCSE
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHH----HcCCCE
Confidence 34678999999999876 667778887764 237999999999998765 457653
No 322
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=92.04 E-value=0.22 Score=49.16 Aligned_cols=54 Identities=22% Similarity=0.269 Sum_probs=41.3
Q ss_pred hhhCCCCCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 327 AVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 327 ~~l~~~~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
...++++|++||-.|||+ |..++++|..++ ..+|+++|.++.+++.++ .+|.+.
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~ 219 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMG-AAQVVVTDLSATRLSKAK----EIGADL 219 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHH----HTTCSE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHH----HhCCCE
Confidence 345788999999999875 666777777653 348999999999988764 467764
No 323
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=91.36 E-value=0.37 Score=47.25 Aligned_cols=68 Identities=12% Similarity=0.042 Sum_probs=48.1
Q ss_pred hCCCCCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCE
Q 012998 329 VDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDK 407 (451)
Q Consensus 329 l~~~~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~ 407 (451)
..+++|++||-.|||+ |..++++|..++ .+|+++|.++++++.++ .+|.+. + + .|...+. ..+|+
T Consensus 172 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~-v-~--~~~~~~~----~~~D~ 237 (348)
T 3two_A 172 SKVTKGTKVGVAGFGGLGSMAVKYAVAMG--AEVSVFARNEHKKQDAL----SMGVKH-F-Y--TDPKQCK----EELDF 237 (348)
T ss_dssp TTCCTTCEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSSTTHHHHH----HTTCSE-E-E--SSGGGCC----SCEEE
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHH----hcCCCe-e-c--CCHHHHh----cCCCE
Confidence 4688999999999865 666777777753 58999999999988764 478764 2 2 3433222 26787
Q ss_pred EEE
Q 012998 408 VLL 410 (451)
Q Consensus 408 Vlv 410 (451)
|+-
T Consensus 238 vid 240 (348)
T 3two_A 238 IIS 240 (348)
T ss_dssp EEE
T ss_pred EEE
Confidence 763
No 324
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=91.26 E-value=0.29 Score=48.68 Aligned_cols=83 Identities=16% Similarity=0.151 Sum_probs=52.8
Q ss_pred hhhCCCCCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccc-cc---cC
Q 012998 327 AVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF-AD---NS 401 (451)
Q Consensus 327 ~~l~~~~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~-~~---~~ 401 (451)
....+++|++||-.|+|+ |..++++|..++ ..+|+++|.++++++.+++ +|.+..+.....|.... .. ..
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~i~~~~~~~ 250 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAG-ATTVILSTRQATKRRLAEE----VGATATVDPSAGDVVEAIAGPVGLV 250 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHHH----HTCSEEECTTSSCHHHHHHSTTSSS
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH----cCCCEEECCCCcCHHHHHHhhhhcc
Confidence 445788999999999865 666777777653 3489999999999887654 68764222112232111 11 12
Q ss_pred CCCcCEEEEcCCCCCc
Q 012998 402 TVKCDKVLLDAPCSGL 417 (451)
Q Consensus 402 ~~~fD~VlvD~PCSg~ 417 (451)
.+.||+||- |+|.
T Consensus 251 ~gg~Dvvid---~~G~ 263 (370)
T 4ej6_A 251 PGGVDVVIE---CAGV 263 (370)
T ss_dssp TTCEEEEEE---CSCC
T ss_pred CCCCCEEEE---CCCC
Confidence 246888875 5553
No 325
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=90.95 E-value=0.22 Score=48.95 Aligned_cols=54 Identities=19% Similarity=0.215 Sum_probs=40.5
Q ss_pred hhhCCCCCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 327 AVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 327 ~~l~~~~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
....+++|++||-.|+|+ |..++++|..++ ..+|+++|.++++++.+++ +|.+.
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~~----lGa~~ 214 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLG-AGRIFAVGSRKHCCDIALE----YGATD 214 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTTT-CSSEEEECCCHHHHHHHHH----HTCCE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEECCCHHHHHHHHH----hCCce
Confidence 345688999999998765 556677777643 3489999999999887654 67753
No 326
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=90.42 E-value=0.52 Score=46.75 Aligned_cols=51 Identities=12% Similarity=0.160 Sum_probs=39.8
Q ss_pred hCCCCCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 329 VDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 329 l~~~~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
+++++|++||-.|+|+ |..++++|..++ .+|+++|.++++++.+++ +|.+.
T Consensus 190 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G--a~Vi~~~~~~~~~~~a~~----lGa~~ 241 (369)
T 1uuf_A 190 WQAGPGKKVGVVGIGGLGHMGIKLAHAMG--AHVVAFTTSEAKREAAKA----LGADE 241 (369)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHH----HTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH----cCCcE
Confidence 3688999999999875 666777777753 579999999999987754 67653
No 327
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=90.00 E-value=0.35 Score=47.33 Aligned_cols=51 Identities=20% Similarity=0.247 Sum_probs=40.9
Q ss_pred CCCCCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 330 DPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 330 ~~~~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
.+++|++||-.|||+ |..++++|..++ ..+|+++|.++++++.++ .+|.+.
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~~~~~~~~----~lGa~~ 219 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDDDRLALAR----EVGADA 219 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCHHHHHHHH----HTTCSE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHH----HcCCCE
Confidence 578999999999876 667778887764 479999999999998765 468764
No 328
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=89.83 E-value=0.41 Score=47.97 Aligned_cols=51 Identities=25% Similarity=0.247 Sum_probs=41.0
Q ss_pred hhCCCCCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCC
Q 012998 328 VVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQV 383 (451)
Q Consensus 328 ~l~~~~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~ 383 (451)
..++++|++||-+|||+ |..++++|..++ ..+|+++|.++++++.++ .+|.
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa 231 (398)
T 2dph_A 180 SAGVKPGSHVYIAGAGPVGRCAAAGARLLG-AACVIVGDQNPERLKLLS----DAGF 231 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHH----TTTC
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHH----HcCC
Confidence 45688999999999876 777888888764 348999999999988764 4676
No 329
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=89.71 E-value=0.53 Score=46.21 Aligned_cols=53 Identities=17% Similarity=0.186 Sum_probs=40.2
Q ss_pred hhhCCCCCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 327 AVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 327 ~~l~~~~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
...++++|++||-.|||+ |..++++|..++ .+|+++|.++++++.++ .+|.+.
T Consensus 162 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~ 215 (352)
T 1e3j_A 162 RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYG--AFVVCTARSPRRLEVAK----NCGADV 215 (352)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH----HTTCSE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEcCCHHHHHHHH----HhCCCE
Confidence 345788999999999764 556667777653 46999999999988765 467763
No 330
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=89.17 E-value=0.36 Score=47.98 Aligned_cols=54 Identities=17% Similarity=0.176 Sum_probs=41.1
Q ss_pred hhhCCCCCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 327 AVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 327 ~~l~~~~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
...++++|++||=+|||+ |..++++|..++ ..+|+++|.++++++.++ .+|.+.
T Consensus 187 ~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~ 241 (378)
T 3uko_A 187 NTAKVEPGSNVAIFGLGTVGLAVAEGAKTAG-ASRIIGIDIDSKKYETAK----KFGVNE 241 (378)
T ss_dssp TTTCCCTTCCEEEECCSHHHHHHHHHHHHHT-CSCEEEECSCTTHHHHHH----TTTCCE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HcCCcE
Confidence 335678999999999864 666777777654 348999999999998654 578764
No 331
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=88.93 E-value=0.46 Score=46.86 Aligned_cols=51 Identities=10% Similarity=0.096 Sum_probs=39.0
Q ss_pred hCCCCCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 329 VDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 329 l~~~~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
.++++|++||-.|+|+ |..++++|..++ .+|+++|.++++++.+++ +|.+.
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~G--a~Vi~~~~~~~~~~~~~~----lGa~~ 226 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMG--AETYVISRSSRKREDAMK----MGADH 226 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHHHH----HTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHH----cCCCE
Confidence 4688999999999854 556667777653 479999999999887654 67653
No 332
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=88.21 E-value=2.3 Score=41.36 Aligned_cols=98 Identities=16% Similarity=0.095 Sum_probs=54.8
Q ss_pred CCeEEeecCCCchHHHHHH---HHcCCCce--EEEEeCCH--------HHHHHHHH-HHHHc----CCCceEEEEcCccc
Q 012998 334 GQSIVDCCAAPGGKTLYMA---SCLSGQGL--VYAIDINK--------GRLRILNE-TAKLH----QVNSVIRTIHADLR 395 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la---~~~~~~g~--V~AvDi~~--------~rl~~l~~-~~~~~----g~~~~I~~~~~Da~ 395 (451)
.-+|||+|-|+|..++... ...++..+ .+++|..+ .-+..+.+ .+... +-.-.+++..+|+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 3479999999999765433 23344454 46777532 11112122 12221 11112467889997
Q ss_pred cccccC-CCCcCEEEEcCCCCCccccccCCcccccCCHhHHHHHH
Q 012998 396 TFADNS-TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELK 439 (451)
Q Consensus 396 ~~~~~~-~~~fD~VlvD~PCSg~G~lrr~pd~~~~~~~~~l~~l~ 439 (451)
...+.. ...||+|++|+=. -+++||++ +++-+..+.
T Consensus 177 ~~l~~l~~~~~Da~flDgFs-----P~kNPeLW---s~e~f~~l~ 213 (308)
T 3vyw_A 177 KRIKEVENFKADAVFHDAFS-----PYKNPELW---TLDFLSLIK 213 (308)
T ss_dssp HHGGGCCSCCEEEEEECCSC-----TTTSGGGG---SHHHHHHHH
T ss_pred HHHhhhcccceeEEEeCCCC-----cccCcccC---CHHHHHHHH
Confidence 754433 3479999999732 14888864 455554443
No 333
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=87.92 E-value=1.1 Score=43.47 Aligned_cols=80 Identities=19% Similarity=0.171 Sum_probs=49.1
Q ss_pred hhCCCCCCeEEeecCCCch-HHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccc-ccccC-CCC
Q 012998 328 VVDPQPGQSIVDCCAAPGG-KTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT-FADNS-TVK 404 (451)
Q Consensus 328 ~l~~~~g~~VLDlcagpG~-kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~-~~~~~-~~~ 404 (451)
...+++|++||=.|||+++ .+.+++..++ ..+|+++|.++++++.++ .+|.+..+.....|..+ +.... ...
T Consensus 158 ~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~~r~~~~~----~~Ga~~~i~~~~~~~~~~v~~~t~g~g 232 (348)
T 4eez_A 158 VSGVKPGDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQDKLNLAK----KIGADVTINSGDVNPVDEIKKITGGLG 232 (348)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCHHHHHHHH----HTTCSEEEEC-CCCHHHHHHHHTTSSC
T ss_pred ccCCCCCCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcHHHhhhhh----hcCCeEEEeCCCCCHHHHhhhhcCCCC
Confidence 3467899999999998754 4555555544 479999999999987654 56776433333333321 11111 234
Q ss_pred cCEEEEcC
Q 012998 405 CDKVLLDA 412 (451)
Q Consensus 405 fD~VlvD~ 412 (451)
+|.++.++
T Consensus 233 ~d~~~~~~ 240 (348)
T 4eez_A 233 VQSAIVCA 240 (348)
T ss_dssp EEEEEECC
T ss_pred ceEEEEec
Confidence 66666643
No 334
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=87.70 E-value=0.86 Score=45.48 Aligned_cols=51 Identities=24% Similarity=0.271 Sum_probs=40.0
Q ss_pred hCCCCCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC
Q 012998 329 VDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN 384 (451)
Q Consensus 329 l~~~~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~ 384 (451)
.++++|++||-+|||+ |..++++|..++ ...|+++|.++++++.++ .+|.+
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlAk~~G-a~~Vi~~~~~~~~~~~a~----~lGa~ 232 (398)
T 1kol_A 181 AGVGPGSTVYVAGAGPVGLAAAASARLLG-AAVVIVGDLNPARLAHAK----AQGFE 232 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHH----HTTCE
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCC-CCeEEEEcCCHHHHHHHH----HcCCc
Confidence 4688999999999866 667778887764 347999999999998775 46763
No 335
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=86.78 E-value=0.5 Score=46.11 Aligned_cols=53 Identities=11% Similarity=0.016 Sum_probs=41.5
Q ss_pred hhhCCCCCCeEEeecCC--CchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 327 AVVDPQPGQSIVDCCAA--PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 327 ~~l~~~~g~~VLDlcag--pG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
...++++|++||-.||| .|..+.+++...+ .+|+++|.++.+++.+++ +|.+.
T Consensus 138 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~----lga~~ 192 (340)
T 3gms_A 138 ETLNLQRNDVLLVNACGSAIGHLFAQLSQILN--FRLIAVTRNNKHTEELLR----LGAAY 192 (340)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHHHH----HTCSE
T ss_pred HhcccCCCCEEEEeCCccHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----CCCcE
Confidence 34578899999999987 5667777777653 589999999999887764 57653
No 336
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=86.30 E-value=0.8 Score=44.68 Aligned_cols=50 Identities=18% Similarity=0.235 Sum_probs=38.6
Q ss_pred hCCCCCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC
Q 012998 329 VDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN 384 (451)
Q Consensus 329 l~~~~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~ 384 (451)
..+++|++||-.|+|+ |..+.+++..++ .+|+++|.++.+++.++ .+|.+
T Consensus 160 ~~~~~g~~VlV~GaG~vG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~----~lGa~ 210 (339)
T 1rjw_A 160 TGAKPGEWVAIYGIGGLGHVAVQYAKAMG--LNVVAVDIGDEKLELAK----ELGAD 210 (339)
T ss_dssp HTCCTTCEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHH----HTTCS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHH----HCCCC
Confidence 3678999999999864 556667776653 59999999999998765 46765
No 337
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=85.75 E-value=0.72 Score=44.41 Aligned_cols=51 Identities=6% Similarity=-0.053 Sum_probs=39.2
Q ss_pred hhhCCCCCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC
Q 012998 327 AVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN 384 (451)
Q Consensus 327 ~~l~~~~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~ 384 (451)
...++++|++||=.|||+ |..++++|..++ .+|++++ ++++++.+++ +|.+
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~-~~~~~~~~~~----lGa~ 187 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNAG--YVVDLVS-ASLSQALAAK----RGVR 187 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHHT--CEEEEEC-SSCCHHHHHH----HTEE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEE-ChhhHHHHHH----cCCC
Confidence 345678999999999964 666777887764 4999999 9998887754 6764
No 338
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=85.16 E-value=1.9 Score=40.74 Aligned_cols=80 Identities=11% Similarity=0.047 Sum_probs=54.6
Q ss_pred CCeEEeecCCCchHHHHHHHHc------CCCceEEEEe-----CCH----------------------HHHHH---HHHH
Q 012998 334 GQSIVDCCAAPGGKTLYMASCL------SGQGLVYAID-----INK----------------------GRLRI---LNET 377 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~------~~~g~V~AvD-----i~~----------------------~rl~~---l~~~ 377 (451)
...|+++|+.-|+.+..++... +...+|+++| ... +.++. ..++
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 3499999999999999877642 2357899999 221 11221 2233
Q ss_pred HHHcCC-CceEEEEcCcccccccc-----CCCCcCEEEEcCC
Q 012998 378 AKLHQV-NSVIRTIHADLRTFADN-----STVKCDKVLLDAP 413 (451)
Q Consensus 378 ~~~~g~-~~~I~~~~~Da~~~~~~-----~~~~fD~VlvD~P 413 (451)
.+++|. .++|+++.+++.+..+. ...+||.|++|+-
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D 191 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLD 191 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCC
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCc
Confidence 446776 36799999999764322 2357999999985
No 339
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=85.01 E-value=0.91 Score=45.50 Aligned_cols=51 Identities=14% Similarity=0.149 Sum_probs=38.5
Q ss_pred CCCCCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 330 DPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 330 ~~~~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
.+++|++||=.|||+ |..++++|..++ ..+|+++|.++.+++.++ ++|.+.
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~ 261 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAG-ASKVILSEPSEVRRNLAK----ELGADH 261 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHH----HHTCSE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHH----HcCCCE
Confidence 578999999998754 555667776653 348999999999998775 467653
No 340
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=84.61 E-value=0.86 Score=45.01 Aligned_cols=48 Identities=13% Similarity=0.016 Sum_probs=36.1
Q ss_pred CCCeEEeec-CC-CchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 333 PGQSIVDCC-AA-PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 333 ~g~~VLDlc-ag-pG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
+|++||=.| +| .|..++++|..++ ..+|+++|.++++++.++ .+|.+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~-g~~Vi~~~~~~~~~~~~~----~lGad~ 220 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRPETQEWVK----SLGAHH 220 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC-CSEEEEECSSHHHHHHHH----HTTCSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHH----HcCCCE
Confidence 789999887 33 3666777777654 469999999999988875 467653
No 341
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=83.61 E-value=2.9 Score=44.84 Aligned_cols=99 Identities=11% Similarity=0.138 Sum_probs=60.9
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC---------C--CceEEEEeC---CHHHHHHHHH-----------HHHHc-----C
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS---------G--QGLVYAIDI---NKGRLRILNE-----------TAKLH-----Q 382 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~---------~--~g~V~AvDi---~~~rl~~l~~-----------~~~~~-----g 382 (451)
+.-+|||+|-|+|...+...+... . .-+++++|. +.+-+..+-. .++.. |
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 345899999999998887766531 1 135899999 6665552211 11111 1
Q ss_pred C--------CceEEEEcCccccccccC----CCCcCEEEEcCCCCCccccccCCcccccCCHhHHHHHH
Q 012998 383 V--------NSVIRTIHADLRTFADNS----TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELK 439 (451)
Q Consensus 383 ~--------~~~I~~~~~Da~~~~~~~----~~~fD~VlvD~PCSg~G~lrr~pd~~~~~~~~~l~~l~ 439 (451)
+ .-.+++..+|+.+..+.. ...||.|++|+.... ++||++ +.+-+..|.
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~-----~np~~w---~~~~~~~l~ 206 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPA-----KNPDMW---TQNLFNAMA 206 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGG-----GCGGGS---CHHHHHHHH
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCc-----CChhhh---hHHHHHHHH
Confidence 1 013567778887654432 367999999996543 788854 444444443
No 342
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=83.06 E-value=1.7 Score=42.11 Aligned_cols=54 Identities=19% Similarity=0.166 Sum_probs=40.0
Q ss_pred hhhCCCCCCeEEeecCCCch-HHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 327 AVVDPQPGQSIVDCCAAPGG-KTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 327 ~~l~~~~g~~VLDlcagpG~-kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
....+++|++||=.|||+.| .++++|..++ ...|+++|.++++++.++ ++|.+.
T Consensus 154 ~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~~~~k~~~a~----~lGa~~ 208 (346)
T 4a2c_A 154 HLAQGCENKNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDISSEKLALAK----SFGAMQ 208 (346)
T ss_dssp HHTTCCTTSEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHH----HTTCSE
T ss_pred HHhccCCCCEEEEECCCCcchHHHHHHHHcC-CcEEEEEechHHHHHHHH----HcCCeE
Confidence 34567899999999987644 4556666654 457899999999988764 578764
No 343
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=82.26 E-value=5.4 Score=37.03 Aligned_cols=85 Identities=9% Similarity=0.000 Sum_probs=60.7
Q ss_pred CCCeEEeecCCCc-hHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc---------cC
Q 012998 333 PGQSIVDCCAAPG-GKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---------NS 401 (451)
Q Consensus 333 ~g~~VLDlcagpG-~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~---------~~ 401 (451)
.|..+|=-|++.+ |....+|..+. .+.+|+.+|.+++.++.+.+.++..+-.+ +.++..|..+... ..
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~-~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPE-AHLYQIDVQSDEEVINGFEQIGKD 83 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSS-CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCc-EEEEEccCCCHHHHHHHHHHHHHH
Confidence 4788898887653 56666665443 34689999999999999999888877544 6778888875421 01
Q ss_pred CCCcCEEEEcCCCCCcc
Q 012998 402 TVKCDKVLLDAPCSGLG 418 (451)
Q Consensus 402 ~~~fD~VlvD~PCSg~G 418 (451)
.+..|.++.++-..+..
T Consensus 84 ~G~iD~lvnnAg~~~~~ 100 (256)
T 4fs3_A 84 VGNIDGVYHSIAFANME 100 (256)
T ss_dssp HCCCSEEEECCCCCCGG
T ss_pred hCCCCEEEecccccccc
Confidence 25789999887655443
No 344
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=81.88 E-value=2 Score=42.13 Aligned_cols=50 Identities=26% Similarity=0.399 Sum_probs=38.9
Q ss_pred hhhCCCCCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHH
Q 012998 327 AVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNET 377 (451)
Q Consensus 327 ~~l~~~~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~ 377 (451)
....+++|++||=.|||+ |..++++|..++ ...|+++|.++++++.+++.
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAAG-ACPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHTT-CCSEEEEESCHHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHh
Confidence 345788999999999865 666777777653 23599999999999988764
No 345
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=81.84 E-value=1.7 Score=42.79 Aligned_cols=53 Identities=8% Similarity=0.047 Sum_probs=40.0
Q ss_pred hhCCCCCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 328 VVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 328 ~l~~~~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
..++++|++||-+|||+ |..++++|..++ ..+|+++|.++++++.++ .+|.+.
T Consensus 186 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~ 239 (373)
T 1p0f_A 186 TAKVTPGSTCAVFGLGGVGFSAIVGCKAAG-ASRIIGVGTHKDKFPKAI----ELGATE 239 (373)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHH----HTTCSE
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHH----HcCCcE
Confidence 34678999999999765 556667777653 348999999999988765 467753
No 346
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=81.81 E-value=3.3 Score=32.67 Aligned_cols=70 Identities=24% Similarity=0.175 Sum_probs=45.7
Q ss_pred CCeEEeecCCCchHHHHHHHHcCCC--ceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc--cCCCCcCEEE
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSGQ--GLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD--NSTVKCDKVL 409 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~~--g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~--~~~~~fD~Vl 409 (451)
+.+|+=+|+ |+.+..++..+... ..|+++|.++.+++.+. ..+ +.++..|..+... ..-..+|.|+
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~~~----~~~~~~d~~~~~~~~~~~~~~d~vi 74 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----RMG----VATKQVDAKDEAGLAKALGGFDAVI 74 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----TTT----CEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----hCC----CcEEEecCCCHHHHHHHHcCCCEEE
Confidence 568888887 77777776655433 47999999999887665 233 3445566654321 1124689999
Q ss_pred EcCC
Q 012998 410 LDAP 413 (451)
Q Consensus 410 vD~P 413 (451)
.-+|
T Consensus 75 ~~~~ 78 (118)
T 3ic5_A 75 SAAP 78 (118)
T ss_dssp ECSC
T ss_pred ECCC
Confidence 8665
No 347
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=81.41 E-value=3.6 Score=39.23 Aligned_cols=82 Identities=16% Similarity=0.115 Sum_probs=59.2
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~ 402 (451)
.|.+||=.|++ ||.+..++..+.. +.+|+.++.++..++.+.+.+...|.. +.++..|..+.... ..
T Consensus 30 ~gk~vlVTGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 30 DGRAAVVTGGA-SGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFD--AHGVVCDVRHLDEMVRLADEAFRLL 106 (301)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC--EEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc--eEEEEccCCCHHHHHHHHHHHHHhC
Confidence 47788877766 6777777766543 458999999999999988888877653 77888998764321 01
Q ss_pred CCcCEEEEcCCCCCc
Q 012998 403 VKCDKVLLDAPCSGL 417 (451)
Q Consensus 403 ~~fD~VlvD~PCSg~ 417 (451)
+..|.++..+--...
T Consensus 107 g~id~lvnnAg~~~~ 121 (301)
T 3tjr_A 107 GGVDVVFSNAGIVVA 121 (301)
T ss_dssp SSCSEEEECCCCCCC
T ss_pred CCCCEEEECCCcCCC
Confidence 478999997754433
No 348
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=81.26 E-value=1.9 Score=42.52 Aligned_cols=53 Identities=15% Similarity=0.129 Sum_probs=39.6
Q ss_pred hhCCCCCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 328 VVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 328 ~l~~~~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
..++++|++||-.|||+ |..++++|..++ ..+|+++|.++++++.++ .+|.+.
T Consensus 190 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~ 243 (376)
T 1e3i_A 190 TAKVTPGSTCAVFGLGCVGLSAIIGCKIAG-ASRIIAIDINGEKFPKAK----ALGATD 243 (376)
T ss_dssp TSCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHH----HTTCSE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HhCCcE
Confidence 34678999999999764 556667777653 348999999999988764 467753
No 349
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=81.17 E-value=2 Score=42.29 Aligned_cols=53 Identities=11% Similarity=0.184 Sum_probs=39.6
Q ss_pred hhCCCCCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 328 VVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 328 ~l~~~~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
..++++|++||-.|+|+ |..++++|..++ ..+|+++|.++++++.++ .+|.+.
T Consensus 187 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~ 240 (374)
T 1cdo_A 187 TAKVEPGSTCAVFGLGAVGLAAVMGCHSAG-AKRIIAVDLNPDKFEKAK----VFGATD 240 (374)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHH----HTTCCE
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHH----HhCCce
Confidence 34678999999999764 556667777653 238999999999998765 467753
No 350
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=80.89 E-value=2.4 Score=41.23 Aligned_cols=51 Identities=10% Similarity=-0.042 Sum_probs=38.7
Q ss_pred CCCCCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 330 DPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 330 ~~~~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
++ +|++||-.|+|+ |..++++|..+.++.+|+++|.++++++.+++ +|.+.
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~ 219 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE----LGADY 219 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----HTCSE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----hCCCE
Confidence 67 899999999865 55677777776212589999999999887654 57653
No 351
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=80.81 E-value=2.1 Score=42.15 Aligned_cols=53 Identities=13% Similarity=0.125 Sum_probs=39.6
Q ss_pred hhCCCCCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 328 VVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 328 ~l~~~~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
..++++|++||-.|||+ |..++++|..++ ..+|+++|.++++++.++ .+|.+.
T Consensus 186 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~ 239 (374)
T 2jhf_A 186 VAKVTQGSTCAVFGLGGVGLSVIMGCKAAG-AARIIGVDINKDKFAKAK----EVGATE 239 (374)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHH----HTTCSE
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HhCCce
Confidence 34678999999999765 556667777653 238999999999988764 467653
No 352
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=80.78 E-value=3.5 Score=38.75 Aligned_cols=82 Identities=16% Similarity=-0.000 Sum_probs=58.2
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccc-ccc---------C
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF-ADN---------S 401 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~-~~~---------~ 401 (451)
.+.+||=.|+ +||.+.+++..+- .+.+|+.++.+...++.+.+.+...+-. .+.++..|..+. ... .
T Consensus 11 ~~k~vlITGa-s~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 11 KRRCAVVTGG-NKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHE-NVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp -CCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCC-SEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCcEEEEecC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 3567776665 4778888877653 3458999999999998888888776654 388889998775 210 0
Q ss_pred CCCcCEEEEcCCCCC
Q 012998 402 TVKCDKVLLDAPCSG 416 (451)
Q Consensus 402 ~~~fD~VlvD~PCSg 416 (451)
.+.+|.++..+-..+
T Consensus 89 ~g~iD~lv~nAg~~~ 103 (311)
T 3o26_A 89 FGKLDILVNNAGVAG 103 (311)
T ss_dssp HSSCCEEEECCCCCS
T ss_pred CCCCCEEEECCcccc
Confidence 247899999876544
No 353
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=80.73 E-value=2.4 Score=41.70 Aligned_cols=52 Identities=12% Similarity=-0.006 Sum_probs=40.2
Q ss_pred hhCCCCCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 328 VVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 328 ~l~~~~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
..++++|++||-.|+|+ |..++++|..++ .+|+++|.++.+++.++ .+|.+.
T Consensus 184 ~~~~~~g~~VlV~G~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~ 236 (363)
T 3uog_A 184 KGHLRAGDRVVVQGTGGVALFGLQIAKATG--AEVIVTSSSREKLDRAF----ALGADH 236 (363)
T ss_dssp TTCCCTTCEEEEESSBHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH----HHTCSE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEecCchhHHHHH----HcCCCE
Confidence 45678999999999775 566677777653 58999999999988764 467764
No 354
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=80.70 E-value=2 Score=42.27 Aligned_cols=53 Identities=13% Similarity=0.147 Sum_probs=39.6
Q ss_pred hhCCCCCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 328 VVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 328 ~l~~~~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
..++++|++||-.|+|+ |..++++|..++ ..+|+++|.++++++.++ .+|.+.
T Consensus 185 ~~~~~~g~~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~ 238 (373)
T 2fzw_A 185 TAKLEPGSVCAVFGLGGVGLAVIMGCKVAG-ASRIIGVDINKDKFARAK----EFGATE 238 (373)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHH----HHTCSE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HcCCce
Confidence 34678999999999765 555667777653 238999999999988765 467653
No 355
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=80.27 E-value=3.6 Score=41.24 Aligned_cols=74 Identities=15% Similarity=-0.025 Sum_probs=45.4
Q ss_pred CCeEEeecCCCchHHHHHHHHc----------------CCCceEEEEeCC-----------HHHHHHHHHHHHHcCC-Cc
Q 012998 334 GQSIVDCCAAPGGKTLYMASCL----------------SGQGLVYAIDIN-----------KGRLRILNETAKLHQV-NS 385 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~----------------~~~g~V~AvDi~-----------~~rl~~l~~~~~~~g~-~~ 385 (451)
..+|+|+||++|..|+.+...+ .+.-.|+.+|+- +...+.++ +..|- .+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~---~~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLE---KENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHH---HHTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhh---hhccCCCC
Confidence 4689999999999999887761 134578999987 33333321 12232 11
Q ss_pred eEEEEcCccccccc--cCCCCcCEEEEc
Q 012998 386 VIRTIHADLRTFAD--NSTVKCDKVLLD 411 (451)
Q Consensus 386 ~I~~~~~Da~~~~~--~~~~~fD~VlvD 411 (451)
-.++.+....+-. .+.++||.|+..
T Consensus 130 -~~f~~gvpgSFy~rlfp~~S~d~v~Ss 156 (384)
T 2efj_A 130 -SCLIGAMPGSFYSRLFPEESMHFLHSC 156 (384)
T ss_dssp -SEEEEECCSCTTSCCSCTTCEEEEEEE
T ss_pred -ceEEEecchhhhhccCCCCceEEEEec
Confidence 2355565544321 235789999763
No 356
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=80.20 E-value=2 Score=41.94 Aligned_cols=47 Identities=11% Similarity=0.080 Sum_probs=34.4
Q ss_pred CCCeEEeec-CC-CchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 333 PGQSIVDCC-AA-PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 333 ~g~~VLDlc-ag-pG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
+|++||=.| +| .|..++++|...+ .+|+++|.++++++.+++ +|.+.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~----lGa~~ 198 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYG--LRVITTASRNETIEWTKK----MGADI 198 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT--CEEEEECCSHHHHHHHHH----HTCSE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----cCCcE
Confidence 899999884 33 3555667776643 599999999999887765 57653
No 357
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=80.01 E-value=2.7 Score=41.26 Aligned_cols=51 Identities=10% Similarity=0.074 Sum_probs=38.9
Q ss_pred hCCCCCCeEEeecC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 329 VDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 329 l~~~~g~~VLDlca--gpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
.++++|++||-.|+ |.|..+++++...+ .+|+++|.++++++.+++ +|.+.
T Consensus 159 ~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~~----~Ga~~ 211 (362)
T 2c0c_A 159 GGLSEGKKVLVTAAAGGTGQFAMQLSKKAK--CHVIGTCSSDEKSAFLKS----LGCDR 211 (362)
T ss_dssp TCCCTTCEEEETTTTBTTHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH----TTCSE
T ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHH----cCCcE
Confidence 46889999999983 45666777777653 589999999999887654 67653
No 358
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=79.95 E-value=2.1 Score=41.47 Aligned_cols=53 Identities=23% Similarity=0.174 Sum_probs=38.5
Q ss_pred hhhCCCCCCeEEeecC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC
Q 012998 327 AVVDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN 384 (451)
Q Consensus 327 ~~l~~~~g~~VLDlca--gpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~ 384 (451)
...++++|++||-.|| |.|..+.+++...+ .+|+++|.++++++.+. +.+|.+
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~---~~~g~~ 197 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLKG--CRVVGIAGGAEKCRFLV---EELGFD 197 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHH---HTTCCS
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH---HHcCCC
Confidence 3456889999999988 34556666666543 59999999999888763 345765
No 359
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=79.73 E-value=7.8 Score=36.30 Aligned_cols=79 Identities=13% Similarity=0.032 Sum_probs=55.5
Q ss_pred CCeEEeecCCCchHHHHHHHHcCCC-ceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CCC
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSGQ-GLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STV 403 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~~-g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~~ 403 (451)
+.+||=.|+ +|+.+..++..+-.. ..|++++.++..++.+.+.++..+. .+.++.+|..+.... ..+
T Consensus 44 ~k~vlITGa-sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 120 (285)
T 2c07_A 44 NKVALVTGA-GRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY--ESSGYAGDVSKKEEISEVINKILTEHK 120 (285)
T ss_dssp SCEEEEEST-TSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTC--CEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCC--ceeEEECCCCCHHHHHHHHHHHHHhcC
Confidence 567776665 578888888776544 4789999999888877777766554 377888898764211 124
Q ss_pred CcCEEEEcCCCC
Q 012998 404 KCDKVLLDAPCS 415 (451)
Q Consensus 404 ~fD~VlvD~PCS 415 (451)
.+|.|+..+--.
T Consensus 121 ~id~li~~Ag~~ 132 (285)
T 2c07_A 121 NVDILVNNAGIT 132 (285)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999876543
No 360
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=79.72 E-value=5.5 Score=36.30 Aligned_cols=80 Identities=15% Similarity=0.062 Sum_probs=55.9
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCC-ceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---C------C
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQ-GLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---S------T 402 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~-g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---~------~ 402 (451)
.+.+||=.| |+|+.+.+++..+-.. .+|+++|.++..++.+.+.++..+. .+.++.+|..+.... . .
T Consensus 10 ~~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 86 (255)
T 1fmc_A 10 DGKCAIITG-AGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG--QAFACRCDITSEQELSALADFAISKL 86 (255)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCC--ceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 356777665 5688888888766443 5899999999988887777776654 377888898764311 0 1
Q ss_pred CCcCEEEEcCCCC
Q 012998 403 VKCDKVLLDAPCS 415 (451)
Q Consensus 403 ~~fD~VlvD~PCS 415 (451)
+.+|.|+..+-..
T Consensus 87 ~~~d~vi~~Ag~~ 99 (255)
T 1fmc_A 87 GKVDILVNNAGGG 99 (255)
T ss_dssp SSCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689999866543
No 361
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=79.62 E-value=2.4 Score=41.29 Aligned_cols=51 Identities=12% Similarity=0.245 Sum_probs=37.4
Q ss_pred hCCCCCCeEEeecCC--CchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC
Q 012998 329 VDPQPGQSIVDCCAA--PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN 384 (451)
Q Consensus 329 l~~~~g~~VLDlcag--pG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~ 384 (451)
.++++|++||-.|+| .|..+.+++.... +.+|+++|.++++++.+++ +|.+
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~-Ga~Vi~~~~~~~~~~~~~~----~g~~ 218 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVS-GATIIGVDVREEAVEAAKR----AGAD 218 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHT-CCEEEEEESSHHHHHHHHH----HTCS
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----hCCC
Confidence 467899999999987 4445556666541 2589999999999887643 5654
No 362
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=79.09 E-value=1.8 Score=42.95 Aligned_cols=52 Identities=21% Similarity=0.189 Sum_probs=38.5
Q ss_pred hC-CCCCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 329 VD-PQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 329 l~-~~~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
++ +++|++||-.|+|+ |..++++|..++ ..+|+++|.++++++.++ .+|.+.
T Consensus 190 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~ 243 (380)
T 1vj0_A 190 YPESFAGKTVVIQGAGPLGLFGVVIARSLG-AENVIVIAGSPNRLKLAE----EIGADL 243 (380)
T ss_dssp CSSCCBTCEEEEECCSHHHHHHHHHHHHTT-BSEEEEEESCHHHHHHHH----HTTCSE
T ss_pred cCCCCCCCEEEEECcCHHHHHHHHHHHHcC-CceEEEEcCCHHHHHHHH----HcCCcE
Confidence 46 78999999999653 445666666642 248999999999988765 467753
No 363
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=78.50 E-value=2.2 Score=37.73 Aligned_cols=51 Identities=18% Similarity=0.246 Sum_probs=34.9
Q ss_pred hhCCCCCCeEEeecCC--CchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC
Q 012998 328 VVDPQPGQSIVDCCAA--PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN 384 (451)
Q Consensus 328 ~l~~~~g~~VLDlcag--pG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~ 384 (451)
..++++|++||..|++ .|..+.+++... +.+|+++|.++++++.++ .+|..
T Consensus 33 ~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~----~~g~~ 85 (198)
T 1pqw_A 33 VGRLSPGERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSDAKREMLS----RLGVE 85 (198)
T ss_dssp TSCCCTTCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHH----TTCCS
T ss_pred HhCCCCCCEEEEeeCCChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHH----HcCCC
Confidence 3467899999999853 344444555443 358999999998887654 35654
No 364
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=77.60 E-value=2.2 Score=41.09 Aligned_cols=51 Identities=14% Similarity=0.069 Sum_probs=37.7
Q ss_pred hCCCCCCeEEeecC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 329 VDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 329 l~~~~g~~VLDlca--gpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
.++++|++||-.|+ |.|..+.+++...+ .+|+++|.++++++.+++ +|.+.
T Consensus 136 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~----~Ga~~ 188 (325)
T 3jyn_A 136 YQVKPGEIILFHAAAGGVGSLACQWAKALG--AKLIGTVSSPEKAAHAKA----LGAWE 188 (325)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHHH----HTCSE
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH----cCCCE
Confidence 46789999998884 34556666676653 589999999999987753 57653
No 365
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=77.38 E-value=2.5 Score=40.92 Aligned_cols=50 Identities=14% Similarity=0.101 Sum_probs=36.9
Q ss_pred hCCCCCCeEEeecC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC
Q 012998 329 VDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN 384 (451)
Q Consensus 329 l~~~~g~~VLDlca--gpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~ 384 (451)
..+++|++||-.|+ |.|..+.+++...+ .+|+++|.++++++.+++ +|.+
T Consensus 144 ~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~----~ga~ 195 (334)
T 3qwb_A 144 YHVKKGDYVLLFAAAGGVGLILNQLLKMKG--AHTIAVASTDEKLKIAKE----YGAE 195 (334)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH----TTCS
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH----cCCc
Confidence 36789999999984 34555666666643 589999999999886644 6765
No 366
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=76.70 E-value=4.8 Score=39.37 Aligned_cols=52 Identities=12% Similarity=-0.007 Sum_probs=37.3
Q ss_pred hCCC-CCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 329 VDPQ-PGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 329 l~~~-~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
..++ +|++||-.|+|+ |..++++|..++ .+|+++|.++++++.++ +.+|.+.
T Consensus 175 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~~~~~~~~~~~---~~lGa~~ 228 (357)
T 2cf5_A 175 FGLKQPGLRGGILGLGGVGHMGVKIAKAMG--HHVTVISSSNKKREEAL---QDLGADD 228 (357)
T ss_dssp TSTTSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSTTHHHHHH---TTSCCSC
T ss_pred cCCCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCChHHHHHHH---HHcCCce
Confidence 3567 999999998653 444556666653 58999999998887654 2467654
No 367
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=76.13 E-value=2.4 Score=41.27 Aligned_cols=52 Identities=12% Similarity=0.119 Sum_probs=39.1
Q ss_pred hhCCCCCCeEEeecC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 328 VVDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 328 ~l~~~~g~~VLDlca--gpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
...+++|++||-.|| |.|..+++++..++ .+|++++.++++++.+++ +|.+.
T Consensus 154 ~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~----~ga~~ 207 (342)
T 4eye_A 154 RGQLRAGETVLVLGAAGGIGTAAIQIAKGMG--AKVIAVVNRTAATEFVKS----VGADI 207 (342)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHH----HTCSE
T ss_pred hcCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----cCCcE
Confidence 346789999999987 34666777777653 589999999999877664 57653
No 368
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=75.13 E-value=0.86 Score=45.35 Aligned_cols=77 Identities=10% Similarity=0.071 Sum_probs=50.3
Q ss_pred CeEEeecCCCchHHHHHHHH---------------cCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc
Q 012998 335 QSIVDCCAAPGGKTLYMASC---------------LSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD 399 (451)
Q Consensus 335 ~~VLDlcagpG~kT~~la~~---------------~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~ 399 (451)
-+|+|+||++|..|+.+... -.+.-.|+.+|+-......+-+.+....-.+.-.++.+....+-.
T Consensus 53 ~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy~ 132 (359)
T 1m6e_X 53 LAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYG 132 (359)
T ss_dssp ECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSS
T ss_pred eEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhhh
Confidence 57999999999998866544 123468999999988888877776532110012355555544321
Q ss_pred --cCCCCcCEEEEc
Q 012998 400 --NSTVKCDKVLLD 411 (451)
Q Consensus 400 --~~~~~fD~VlvD 411 (451)
.+.++||.|+..
T Consensus 133 rlfp~~S~d~v~Ss 146 (359)
T 1m6e_X 133 RLFPRNTLHFIHSS 146 (359)
T ss_dssp CCSCTTCBSCEEEE
T ss_pred ccCCCCceEEEEeh
Confidence 235789999753
No 369
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=74.79 E-value=2.6 Score=40.57 Aligned_cols=51 Identities=14% Similarity=0.031 Sum_probs=37.9
Q ss_pred hCCCCCC-eEEeecC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 329 VDPQPGQ-SIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 329 l~~~~g~-~VLDlca--gpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
.++++|+ +||-.|| |.|..++++|..++ .+|++++.++++++.++ .+|.+.
T Consensus 144 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~~~~~~~----~lGa~~ 197 (328)
T 1xa0_A 144 HGLTPERGPVLVTGATGGVGSLAVSMLAKRG--YTVEASTGKAAEHDYLR----VLGAKE 197 (328)
T ss_dssp TTCCGGGCCEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCTTCHHHHH----HTTCSE
T ss_pred cCCCCCCceEEEecCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHH----HcCCcE
Confidence 3577886 8999987 44566777777754 57999999998888765 367654
No 370
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=74.46 E-value=14 Score=34.22 Aligned_cols=83 Identities=13% Similarity=0.087 Sum_probs=57.5
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc-----CCCCcC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN-----STVKCD 406 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~-----~~~~fD 406 (451)
.|.+||=.|+ +||.+..++..+. .+.+|+.+|.++..++.+.+.+...+....+.++..|..+.... ..+..|
T Consensus 9 ~~k~~lVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 87 (267)
T 3t4x_A 9 KGKTALVTGS-TAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD 87 (267)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence 3667776665 4777777776554 34589999999999988888877765444577888887653210 125789
Q ss_pred EEEEcCCCCC
Q 012998 407 KVLLDAPCSG 416 (451)
Q Consensus 407 ~VlvD~PCSg 416 (451)
.++..+--+.
T Consensus 88 ~lv~nAg~~~ 97 (267)
T 3t4x_A 88 ILINNLGIFE 97 (267)
T ss_dssp EEEECCCCCC
T ss_pred EEEECCCCCC
Confidence 9998775443
No 371
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=73.97 E-value=17 Score=32.82 Aligned_cols=80 Identities=11% Similarity=0.125 Sum_probs=57.3
Q ss_pred CCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc---------cCCC
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---------NSTV 403 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~---------~~~~ 403 (451)
+.+||=.| |+|+.+.+++..+.. +.+|+.++.++..++.+.+.++..+.. +.++..|..+... ...+
T Consensus 5 ~k~vlITG-as~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 5 EKVALVTG-ASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFK--ARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCC--EEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc--eEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 55677666 457777777766543 458999999999999988888887753 7888899876431 1124
Q ss_pred CcCEEEEcCCCCC
Q 012998 404 KCDKVLLDAPCSG 416 (451)
Q Consensus 404 ~fD~VlvD~PCSg 416 (451)
.+|.++..+--+.
T Consensus 82 ~id~li~~Ag~~~ 94 (247)
T 3lyl_A 82 AIDILVNNAGITR 94 (247)
T ss_dssp CCSEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 6899998775443
No 372
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=73.91 E-value=16 Score=33.79 Aligned_cols=79 Identities=18% Similarity=0.093 Sum_probs=56.9
Q ss_pred CCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CCC
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STV 403 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~~ 403 (451)
+.+||=.| |+|+.+..++..+- .+..|++++.++..++.+.+.+...|....+.++.+|..+.... ..+
T Consensus 32 ~k~vlVTG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 110 (279)
T 1xg5_A 32 DRLALVTG-ASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 110 (279)
T ss_dssp TCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 56777666 55788888876654 34589999999999988888888777655678888998764311 013
Q ss_pred CcCEEEEcCC
Q 012998 404 KCDKVLLDAP 413 (451)
Q Consensus 404 ~fD~VlvD~P 413 (451)
.+|.|+..+-
T Consensus 111 ~iD~vi~~Ag 120 (279)
T 1xg5_A 111 GVDICINNAG 120 (279)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899988654
No 373
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=73.81 E-value=12 Score=35.10 Aligned_cols=79 Identities=16% Similarity=0.110 Sum_probs=57.6
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc---------cCC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---------NST 402 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~---------~~~ 402 (451)
.|..+|=-|++ +|....+|..+- .+.+|+.+|.+++.++...+.+...|.+ +.++.+|..+... ...
T Consensus 8 ~gKvalVTGas-~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~--~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 8 TGKTALVTGSA-RGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYD--AHGVAFDVTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCC--EEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc--EEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 36677776665 567777776554 3468999999999999999989888864 6788899876421 123
Q ss_pred CCcCEEEEcCCC
Q 012998 403 VKCDKVLLDAPC 414 (451)
Q Consensus 403 ~~fD~VlvD~PC 414 (451)
+..|+++.++--
T Consensus 85 G~iDiLVNNAG~ 96 (255)
T 4g81_D 85 IHVDILINNAGI 96 (255)
T ss_dssp CCCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 678999988743
No 374
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=73.62 E-value=10 Score=35.76 Aligned_cols=79 Identities=13% Similarity=0.032 Sum_probs=55.6
Q ss_pred CCeEEeecCCCchHHHHHHHHcCCCc----eEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSGQG----LVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN--------- 400 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~~g----~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~--------- 400 (451)
|.+||=.|++ ||.+..++..+-..| .|+.++.+...++.+.+.+....-...+.++.+|..+....
T Consensus 33 ~k~~lVTGas-~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 111 (287)
T 3rku_A 33 KKTVLITGAS-AGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ 111 (287)
T ss_dssp TCEEEEESTT-SHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred CCEEEEecCC-ChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 6678877755 677777776653222 89999999999998888887653333578888998764321
Q ss_pred CCCCcCEEEEcCC
Q 012998 401 STVKCDKVLLDAP 413 (451)
Q Consensus 401 ~~~~fD~VlvD~P 413 (451)
..+..|.++..+-
T Consensus 112 ~~g~iD~lVnnAG 124 (287)
T 3rku_A 112 EFKDIDILVNNAG 124 (287)
T ss_dssp GGCSCCEEEECCC
T ss_pred hcCCCCEEEECCC
Confidence 1246899998764
No 375
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=73.60 E-value=18 Score=34.11 Aligned_cols=82 Identities=13% Similarity=-0.029 Sum_probs=54.1
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEE-cCccccccccC--CCCcCEE
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTI-HADLRTFADNS--TVKCDKV 408 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~-~~Da~~~~~~~--~~~fD~V 408 (451)
.+.+||=.|+ +|+.+.+++..+-. +..|++++.+......+.+.+....-. .++++ .+|..+..... ...+|.|
T Consensus 10 ~~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~d~v 87 (342)
T 1y1p_A 10 EGSLVLVTGA-NGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPG-RFETAVVEDMLKQGAYDEVIKGAAGV 87 (342)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTT-TEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred CCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCC-ceEEEEecCCcChHHHHHHHcCCCEE
Confidence 4678886664 58888888876543 358999999988776665554332112 37777 78887643211 2368999
Q ss_pred EEcCCCCC
Q 012998 409 LLDAPCSG 416 (451)
Q Consensus 409 lvD~PCSg 416 (451)
+.-+..+.
T Consensus 88 ih~A~~~~ 95 (342)
T 1y1p_A 88 AHIASVVS 95 (342)
T ss_dssp EECCCCCS
T ss_pred EEeCCCCC
Confidence 98776544
No 376
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=73.54 E-value=3.4 Score=34.52 Aligned_cols=71 Identities=14% Similarity=0.086 Sum_probs=46.8
Q ss_pred CCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc---cCCCCcCEEE
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---NSTVKCDKVL 409 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~---~~~~~fD~Vl 409 (451)
.++|+=+|+ |..+..+++.+.. +..|+++|.++++++.+++ .|+ .++.+|+.+... .....+|.|+
T Consensus 7 ~~~viIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~g~----~~i~gd~~~~~~l~~a~i~~ad~vi 76 (140)
T 3fwz_A 7 CNHALLVGY--GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----RGV----RAVLGNAANEEIMQLAHLECAKWLI 76 (140)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TTC----EEEESCTTSHHHHHHTTGGGCSEEE
T ss_pred CCCEEEECc--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----cCC----CEEECCCCCHHHHHhcCcccCCEEE
Confidence 356777776 5666667766543 3589999999999887654 453 457788765321 1124689998
Q ss_pred EcCCC
Q 012998 410 LDAPC 414 (451)
Q Consensus 410 vD~PC 414 (451)
+-.|-
T Consensus 77 ~~~~~ 81 (140)
T 3fwz_A 77 LTIPN 81 (140)
T ss_dssp ECCSC
T ss_pred EECCC
Confidence 86553
No 377
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=73.32 E-value=13 Score=34.60 Aligned_cols=80 Identities=16% Similarity=0.114 Sum_probs=55.9
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc----------C
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN----------S 401 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~----------~ 401 (451)
.|.+||=.|+ +|+.+..++..+-. +.+|++++.++..++.+.+.++..|. .+.++.+|..+.... .
T Consensus 20 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 96 (273)
T 1ae1_A 20 KGTTALVTGG-SKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL--NVEGSVCDLLSRTERDKLMQTVAHVF 96 (273)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECC-cchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3667777775 57778877766543 45899999999988887777766664 377888898654211 1
Q ss_pred CCCcCEEEEcCCCC
Q 012998 402 TVKCDKVLLDAPCS 415 (451)
Q Consensus 402 ~~~fD~VlvD~PCS 415 (451)
.+.+|.++..+--.
T Consensus 97 ~g~id~lv~nAg~~ 110 (273)
T 1ae1_A 97 DGKLNILVNNAGVV 110 (273)
T ss_dssp TSCCCEEEECCCCC
T ss_pred CCCCcEEEECCCCC
Confidence 15789999877543
No 378
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=73.27 E-value=2.3 Score=40.45 Aligned_cols=49 Identities=18% Similarity=0.203 Sum_probs=37.2
Q ss_pred CCCCCeEEeecC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 331 PQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 331 ~~~g~~VLDlca--gpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
+++|++||-.|+ |.|..+.+++..++ .+|+++|.++++++.++ .+|.+.
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~----~~ga~~ 173 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMG--LRVLAAASRPEKLALPL----ALGAEE 173 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTT--CEEEEEESSGGGSHHHH----HTTCSE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH----hcCCCE
Confidence 789999999997 34556667777653 58999999999888764 367653
No 379
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=73.18 E-value=3.4 Score=40.35 Aligned_cols=52 Identities=15% Similarity=0.212 Sum_probs=37.4
Q ss_pred hhCCCCCCeEEeecC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 328 VVDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 328 ~l~~~~g~~VLDlca--gpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
...+++|++||-.|+ |.|..+++++...+ .+|+++|.++++++.+++ +|.+.
T Consensus 162 ~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~----lGa~~ 215 (353)
T 4dup_A 162 MAGLTEGESVLIHGGTSGIGTTAIQLARAFG--AEVYATAGSTGKCEACER----LGAKR 215 (353)
T ss_dssp TTCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH----HTCSE
T ss_pred hcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----cCCCE
Confidence 346789999998843 23555666666643 589999999999987764 57653
No 380
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=73.07 E-value=6.9 Score=37.17 Aligned_cols=81 Identities=11% Similarity=0.001 Sum_probs=56.6
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~ 402 (451)
.|.+||=.|+ +|+.+..++..+- .+..|+.+|.+...++.+.+.+...+.. .+.++.+|..+.... ..
T Consensus 40 ~~k~vlVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 117 (293)
T 3rih_A 40 SARSVLVTGG-TKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAG-NVIGVRLDVSDPGSCADAARTVVDAF 117 (293)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSS-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCC-cEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 3556766665 5677887776654 3458999999999998888888776643 378888998764210 12
Q ss_pred CCcCEEEEcCCCC
Q 012998 403 VKCDKVLLDAPCS 415 (451)
Q Consensus 403 ~~fD~VlvD~PCS 415 (451)
+..|.++..+--.
T Consensus 118 g~iD~lvnnAg~~ 130 (293)
T 3rih_A 118 GALDVVCANAGIF 130 (293)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4689999877543
No 381
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=72.11 E-value=14 Score=33.88 Aligned_cols=83 Identities=16% Similarity=0.103 Sum_probs=56.8
Q ss_pred CCCeEEeecCC-CchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------C
Q 012998 333 PGQSIVDCCAA-PGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------S 401 (451)
Q Consensus 333 ~g~~VLDlcag-pG~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~ 401 (451)
.|.+||=.|+. . |.+.+++..+- .+.+|+.+|.+...++.+.+.++..+-. .+.++.+|..+.... .
T Consensus 21 ~~k~vlITGasg~-GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 21 KGKVVLVTAAAGT-GIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLG-RVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTCEEEESSCSSS-SHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSS-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCC-chHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCC-ceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 36678877763 3 45555655443 3468999999999999888888766544 488899998764311 0
Q ss_pred CCCcCEEEEcCCCCCc
Q 012998 402 TVKCDKVLLDAPCSGL 417 (451)
Q Consensus 402 ~~~fD~VlvD~PCSg~ 417 (451)
.+.+|.++..+--+..
T Consensus 99 ~g~id~li~~Ag~~~~ 114 (266)
T 3o38_A 99 AGRLDVLVNNAGLGGQ 114 (266)
T ss_dssp HSCCCEEEECCCCCCC
T ss_pred hCCCcEEEECCCcCCC
Confidence 1468999997754433
No 382
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=71.85 E-value=3.1 Score=42.26 Aligned_cols=51 Identities=10% Similarity=0.026 Sum_probs=38.8
Q ss_pred hCCCCCCeEEeecC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 329 VDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 329 l~~~~g~~VLDlca--gpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
.++++|++||=.|| |.|..++++|..++ .+|++++.++.+++.++ .+|.+.
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~G--a~vi~~~~~~~~~~~~~----~lGa~~ 276 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGG--ANPICVVSSPQKAEICR----AMGAEA 276 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHH----HHTCCE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CeEEEEECCHHHHHHHH----hhCCcE
Confidence 46789999999987 34666777777653 58999999999988774 468764
No 383
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=71.84 E-value=7.7 Score=32.02 Aligned_cols=70 Identities=14% Similarity=0.130 Sum_probs=47.5
Q ss_pred CCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc---cCCCCcCEEE
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---NSTVKCDKVL 409 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~---~~~~~fD~Vl 409 (451)
+.+|+=+|+ |..+..++..+.. +..|+++|.++++++.+++ .| +.++.+|..+... .....+|.|+
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~~----~~~~~gd~~~~~~l~~~~~~~~d~vi 75 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----EG----FDAVIADPTDESFYRSLDLEGVSAVL 75 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT----CEEEECCTTCHHHHHHSCCTTCSEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----CC----CcEEECCCCCHHHHHhCCcccCCEEE
Confidence 457888887 5677777776653 3479999999998887654 24 3456788765321 1124689998
Q ss_pred EcCC
Q 012998 410 LDAP 413 (451)
Q Consensus 410 vD~P 413 (451)
+-.|
T Consensus 76 ~~~~ 79 (141)
T 3llv_A 76 ITGS 79 (141)
T ss_dssp ECCS
T ss_pred EecC
Confidence 8555
No 384
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=71.84 E-value=7.4 Score=35.85 Aligned_cols=83 Identities=12% Similarity=-0.035 Sum_probs=58.5
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccC--------CC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS--------TV 403 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~--------~~ 403 (451)
.|.+||=.|++ ||.+..++..+.. +.+|+.+|.++..++.+.+.++..|. .+.++.+|..+..... .+
T Consensus 6 ~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~g 82 (252)
T 3h7a_A 6 RNATVAVIGAG-DYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGG--RIVARSLDARNEDEVTAFLNAADAHA 82 (252)
T ss_dssp CSCEEEEECCS-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC--EEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--eEEEEECcCCCHHHHHHHHHHHHhhC
Confidence 35677766665 6677777765543 45899999999999998888887764 4788899987643110 04
Q ss_pred CcCEEEEcCCCCCcc
Q 012998 404 KCDKVLLDAPCSGLG 418 (451)
Q Consensus 404 ~fD~VlvD~PCSg~G 418 (451)
..|.++..+-....+
T Consensus 83 ~id~lv~nAg~~~~~ 97 (252)
T 3h7a_A 83 PLEVTIFNVGANVNF 97 (252)
T ss_dssp CEEEEEECCCCCCCC
T ss_pred CceEEEECCCcCCCC
Confidence 789999877554433
No 385
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=71.52 E-value=2 Score=42.62 Aligned_cols=48 Identities=13% Similarity=-0.032 Sum_probs=36.3
Q ss_pred CCCCeEEeecCCCchHH---HHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 332 QPGQSIVDCCAAPGGKT---LYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 332 ~~g~~VLDlcagpG~kT---~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
++|++||=+++|.|+.. +++|..++ .+|+++|.++++++.++ .+|.+.
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~ 219 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKDG--IKLVNIVRKQEQADLLK----AQGAVH 219 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHHT--CCEEEEESSHHHHHHHH----HTTCSC
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHH----hCCCcE
Confidence 68999999876666654 55666553 48999999999998776 478765
No 386
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=71.20 E-value=4 Score=39.08 Aligned_cols=50 Identities=18% Similarity=0.137 Sum_probs=36.0
Q ss_pred CCCCCC-eEEeecC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 330 DPQPGQ-SIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 330 ~~~~g~-~VLDlca--gpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
++++++ .||=.|| |.|..++++|..++ .+|++++.++++++.+++ +|.+.
T Consensus 142 ~~~~~~g~VlV~Ga~G~vG~~aiqla~~~G--a~Vi~~~~~~~~~~~~~~----lGa~~ 194 (324)
T 3nx4_A 142 GIRPQDGEVVVTGASGGVGSTAVALLHKLG--YQVAAVSGRESTHGYLKS----LGANR 194 (324)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCGGGHHHHHH----HTCSE
T ss_pred ccCCCCCeEEEECCCcHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----cCCCE
Confidence 345532 4888876 45667778888754 589999999999988764 68764
No 387
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=71.05 E-value=18 Score=35.83 Aligned_cols=81 Identities=12% Similarity=0.076 Sum_probs=57.1
Q ss_pred CCeEEeecCCCchHHHHHHHHcCCCc--eEEEEeCCHHHHHHHHHHHHHcCC--CceEEEEcCcccccccc----CCCCc
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSGQG--LVYAIDINKGRLRILNETAKLHQV--NSVIRTIHADLRTFADN----STVKC 405 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~~g--~V~AvDi~~~rl~~l~~~~~~~g~--~~~I~~~~~Da~~~~~~----~~~~f 405 (451)
+.+||=.|+ +|+.+.++++.+-..| .|+++|.++..+..+.+.+....- ...+.++.+|..+.... ....+
T Consensus 35 ~k~vLVTGa-tG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~ 113 (399)
T 3nzo_A 35 QSRFLVLGG-AGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQY 113 (399)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCCC
T ss_pred CCEEEEEcC-ChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCCC
Confidence 667886664 5899999988776554 899999999988877776655321 13488999998764311 12578
Q ss_pred CEEEEcCCCC
Q 012998 406 DKVLLDAPCS 415 (451)
Q Consensus 406 D~VlvD~PCS 415 (451)
|.|+.-+-.+
T Consensus 114 D~Vih~Aa~~ 123 (399)
T 3nzo_A 114 DYVLNLSALK 123 (399)
T ss_dssp SEEEECCCCC
T ss_pred CEEEECCCcC
Confidence 9999855443
No 388
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=70.79 E-value=15 Score=35.18 Aligned_cols=81 Identities=12% Similarity=0.034 Sum_probs=58.8
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~ 402 (451)
.|.+||=.|++ |+.+.+++..+- .+..|++++.+...++.+.+.+...+....+.++..|..+.... ..
T Consensus 7 ~~k~vlVTGas-~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 7 AGRTAFVTGGA-NGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp TTCEEEEETTT-STHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 36678877765 677888777654 34589999999999999888888777543588889998764311 12
Q ss_pred CCcCEEEEcCCC
Q 012998 403 VKCDKVLLDAPC 414 (451)
Q Consensus 403 ~~fD~VlvD~PC 414 (451)
+..|.++..+--
T Consensus 86 g~id~lv~nAg~ 97 (319)
T 3ioy_A 86 GPVSILCNNAGV 97 (319)
T ss_dssp CCEEEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 468999987743
No 389
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=70.68 E-value=4.8 Score=39.31 Aligned_cols=51 Identities=12% Similarity=0.070 Sum_probs=34.2
Q ss_pred hCCCCC------CeEEeecCCC-chHH-HHHH-HHcCCCceEEEEeCCHH---HHHHHHHHHHHcCCC
Q 012998 329 VDPQPG------QSIVDCCAAP-GGKT-LYMA-SCLSGQGLVYAIDINKG---RLRILNETAKLHQVN 384 (451)
Q Consensus 329 l~~~~g------~~VLDlcagp-G~kT-~~la-~~~~~~g~V~AvDi~~~---rl~~l~~~~~~~g~~ 384 (451)
.++++| ++||-.|+|+ |..+ +++| ..+ +..+|+++|.+++ +++.++ .+|.+
T Consensus 162 ~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~----~lGa~ 224 (357)
T 2b5w_A 162 AYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIE----ELDAT 224 (357)
T ss_dssp HHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHH----HTTCE
T ss_pred cCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHH----HcCCc
Confidence 456789 9999999843 3334 4555 433 2224999999998 888764 46764
No 390
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=70.68 E-value=15 Score=33.85 Aligned_cols=67 Identities=7% Similarity=0.028 Sum_probs=50.3
Q ss_pred CeEEeecCCCchHHHHHHHHcCCC-ceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEEcCC
Q 012998 335 QSIVDCCAAPGGKTLYMASCLSGQ-GLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAP 413 (451)
Q Consensus 335 ~~VLDlcagpG~kT~~la~~~~~~-g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD~P 413 (451)
++||=.| + |..+.+++..+... ..|++++.++.....+.. . .++++.+|..++. ...+|.|+.-+.
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~----~~~~~~~D~~d~~---~~~~d~vi~~a~ 72 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA----S----GAEPLLWPGEEPS---LDGVTHLLISTA 72 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH----T----TEEEEESSSSCCC---CTTCCEEEECCC
T ss_pred CcEEEEC-C-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh----C----CCeEEEecccccc---cCCCCEEEECCC
Confidence 5899999 5 99999998877544 489999999887665432 1 2778889988854 356899998554
Q ss_pred C
Q 012998 414 C 414 (451)
Q Consensus 414 C 414 (451)
-
T Consensus 73 ~ 73 (286)
T 3ius_A 73 P 73 (286)
T ss_dssp C
T ss_pred c
Confidence 3
No 391
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=70.34 E-value=13 Score=34.63 Aligned_cols=84 Identities=13% Similarity=0.037 Sum_probs=58.0
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~ 402 (451)
.|.+||=.|++ ||.+..++..+- .+.+|+.++.++..++.+.+.+...|. .+.++.+|..+.... ..
T Consensus 23 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 23 RPQTAFVTGVS-SGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGH--DVDGSSCDVTSTDEVHAAVAAAVERF 99 (279)
T ss_dssp --CEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC--CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 36677777755 677777776554 345899999999999988888877764 378888998764311 02
Q ss_pred CCcCEEEEcCCCCCccc
Q 012998 403 VKCDKVLLDAPCSGLGV 419 (451)
Q Consensus 403 ~~fD~VlvD~PCSg~G~ 419 (451)
+..|.++..+-....+.
T Consensus 100 g~id~lv~nAg~~~~~~ 116 (279)
T 3sju_A 100 GPIGILVNSAGRNGGGE 116 (279)
T ss_dssp CSCCEEEECCCCCCCSC
T ss_pred CCCcEEEECCCCCCCCC
Confidence 47899999876544443
No 392
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=70.13 E-value=13 Score=34.85 Aligned_cols=82 Identities=12% Similarity=0.035 Sum_probs=57.9
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~ 402 (451)
.|.+||=.|++ |+.+..++..+-. +.+|+.++.++..++.+.+.+...|.. +.++.+|..+.... ..
T Consensus 31 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~Dl~d~~~v~~~~~~~~~~~ 107 (276)
T 3r1i_A 31 SGKRALITGAS-TGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGK--ALPIRCDVTQPDQVRGMLDQMTGEL 107 (276)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCC--CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe--EEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 36677777665 6777777765543 458999999999999888888877653 67788898764311 01
Q ss_pred CCcCEEEEcCCCCCc
Q 012998 403 VKCDKVLLDAPCSGL 417 (451)
Q Consensus 403 ~~fD~VlvD~PCSg~ 417 (451)
+..|.++..+-.+..
T Consensus 108 g~iD~lvnnAg~~~~ 122 (276)
T 3r1i_A 108 GGIDIAVCNAGIVSV 122 (276)
T ss_dssp SCCSEEEECCCCCCC
T ss_pred CCCCEEEECCCCCCC
Confidence 478999997754433
No 393
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=69.97 E-value=5.7 Score=38.58 Aligned_cols=51 Identities=16% Similarity=0.062 Sum_probs=36.9
Q ss_pred hhCCCCCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC
Q 012998 328 VVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN 384 (451)
Q Consensus 328 ~l~~~~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~ 384 (451)
..++ +|++||-.|+|+ |..++++|..++ ..+|+++|.++++++.++ .+|.+
T Consensus 163 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~~~~~~~~~~~----~~Ga~ 214 (348)
T 2d8a_A 163 AGPI-SGKSVLITGAGPLGLLGIAVAKASG-AYPVIVSEPSDFRRELAK----KVGAD 214 (348)
T ss_dssp TSCC-TTCCEEEECCSHHHHHHHHHHHHTT-CCSEEEECSCHHHHHHHH----HHTCS
T ss_pred hcCC-CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHH----HhCCC
Confidence 3457 899999999853 455666666543 238999999999988765 35664
No 394
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=69.64 E-value=8.1 Score=37.34 Aligned_cols=50 Identities=16% Similarity=0.218 Sum_probs=38.8
Q ss_pred hCCCCCCeEEeecC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC
Q 012998 329 VDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN 384 (451)
Q Consensus 329 l~~~~g~~VLDlca--gpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~ 384 (451)
.++++|++||-.|+ |.|..+.+++...+ .+|+++|.++.+++.+++ +|.+
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G--~~Vi~~~~~~~~~~~~~~----~ga~ 213 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLFG--ARVIATAGSEDKLRRAKA----LGAD 213 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH----HTCS
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHh----cCCC
Confidence 36789999999998 45666777777643 589999999999987753 5654
No 395
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=69.46 E-value=21 Score=32.85 Aligned_cols=77 Identities=12% Similarity=-0.004 Sum_probs=55.9
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~ 402 (451)
.|.+||=.|++ |+.+..++..+- .+.+|+.+|.+...++.+.+.+...|. .+.++.+|..+.... ..
T Consensus 10 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 10 TDKVVVISGVG-PALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGR--RALSVGTDITDDAQVAHLVDETMKAY 86 (264)
T ss_dssp TTCEEEEESCC-TTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCcEEEEECCC-cHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46778877765 566776666554 345899999999999998888887764 377888998764311 12
Q ss_pred CCcCEEEEcC
Q 012998 403 VKCDKVLLDA 412 (451)
Q Consensus 403 ~~fD~VlvD~ 412 (451)
+..|.++..+
T Consensus 87 g~id~lv~nA 96 (264)
T 3ucx_A 87 GRVDVVINNA 96 (264)
T ss_dssp SCCSEEEECC
T ss_pred CCCcEEEECC
Confidence 4789999877
No 396
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=69.39 E-value=10 Score=30.73 Aligned_cols=71 Identities=20% Similarity=0.176 Sum_probs=43.7
Q ss_pred CCeEEeecCCCchHHHHHHHHcCCC-ceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccc---ccCCCCcCEEE
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSGQ-GLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA---DNSTVKCDKVL 409 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~~-g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~---~~~~~~fD~Vl 409 (451)
+++|+=+|+ |..+..++..+... ..|+.+|.++..++.+.+. .|+ .++.+|..+.. ......+|.|+
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~~~----~~~~~d~~~~~~l~~~~~~~~d~vi 74 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---IDA----LVINGDCTKIKTLEDAGIEDADMYI 74 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---CSS----EEEESCTTSHHHHHHTTTTTCSEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---cCc----EEEEcCCCCHHHHHHcCcccCCEEE
Confidence 457776665 67777777665433 4799999999887765432 243 34556654321 11124689998
Q ss_pred EcCC
Q 012998 410 LDAP 413 (451)
Q Consensus 410 vD~P 413 (451)
+-.|
T Consensus 75 ~~~~ 78 (140)
T 1lss_A 75 AVTG 78 (140)
T ss_dssp ECCS
T ss_pred EeeC
Confidence 8655
No 397
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=68.81 E-value=7.7 Score=37.88 Aligned_cols=52 Identities=13% Similarity=0.231 Sum_probs=37.9
Q ss_pred hCCCCCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 329 VDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 329 l~~~~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
.++++|++||=.|+|+ |..++++|..+.+ .+|+++|.++++++.++ .+|.+.
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~G-a~Vi~~~~~~~~~~~~~----~lGa~~ 234 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTP-ATVIALDVKEEKLKLAE----RLGADH 234 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCC-CEEEEEESSHHHHHHHH----HTTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEeCCHHHHHHHH----HhCCCE
Confidence 5788999999999852 3345566666522 58999999999988765 467654
No 398
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=68.64 E-value=16 Score=34.11 Aligned_cols=76 Identities=16% Similarity=0.073 Sum_probs=54.4
Q ss_pred CCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CCC
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STV 403 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~~ 403 (451)
|.+||=.|+ +|+.+.+++..+. .+.+|++++.++..++.+.+.+...|.. .+.++.+|..+.... ..+
T Consensus 28 ~k~vlITGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~g 105 (286)
T 1xu9_A 28 GKKVIVTGA-SKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAA-SAHYIAGTMEDMTFAEQFVAQAGKLMG 105 (286)
T ss_dssp TCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCS-EEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCC-ceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 667886664 5778888776553 3458999999999998888777776654 378888898764210 014
Q ss_pred CcCEEEEc
Q 012998 404 KCDKVLLD 411 (451)
Q Consensus 404 ~fD~VlvD 411 (451)
.+|.|+..
T Consensus 106 ~iD~li~n 113 (286)
T 1xu9_A 106 GLDMLILN 113 (286)
T ss_dssp SCSEEEEC
T ss_pred CCCEEEEC
Confidence 68999987
No 399
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=68.53 E-value=17 Score=34.05 Aligned_cols=79 Identities=13% Similarity=0.030 Sum_probs=54.6
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCC-CceEEEEeC-CHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------C
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDI-NKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------S 401 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi-~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~ 401 (451)
.|..||=.|++ ||.+..++..+-. +.+|+.+|. ++..++.+.+.+...|. .+.++.+|..+.... .
T Consensus 28 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 28 ARPVAIVTGGR-RGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGA--RVIFLRADLADLSSHQATVDAVVAE 104 (280)
T ss_dssp CCCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTC--CEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred CCCEEEEecCC-CHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCC--cEEEEEecCCCHHHHHHHHHHHHHH
Confidence 46677776654 6677777765543 458999995 88888888888877764 378888998765321 0
Q ss_pred CCCcCEEEEcCCC
Q 012998 402 TVKCDKVLLDAPC 414 (451)
Q Consensus 402 ~~~fD~VlvD~PC 414 (451)
.+..|.++..+--
T Consensus 105 ~g~iD~lvnnAg~ 117 (280)
T 4da9_A 105 FGRIDCLVNNAGI 117 (280)
T ss_dssp HSCCCEEEEECC-
T ss_pred cCCCCEEEECCCc
Confidence 1478999987643
No 400
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=68.31 E-value=17 Score=33.29 Aligned_cols=80 Identities=14% Similarity=0.068 Sum_probs=55.6
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc----------C
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN----------S 401 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~----------~ 401 (451)
.|.+||=.|+ +|+.+.+++..+-. +.+|++++.++..++.+.+.+...|. .+.++.+|..+.... .
T Consensus 8 ~~k~vlVTGa-s~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (260)
T 2ae2_A 8 EGCTALVTGG-SRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF--KVEASVCDLSSRSERQELMNTVANHF 84 (260)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--EEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3667776665 57778877765543 45899999999988877777766553 477888898764211 1
Q ss_pred CCCcCEEEEcCCCC
Q 012998 402 TVKCDKVLLDAPCS 415 (451)
Q Consensus 402 ~~~fD~VlvD~PCS 415 (451)
.+.+|.++..+-..
T Consensus 85 ~g~id~lv~~Ag~~ 98 (260)
T 2ae2_A 85 HGKLNILVNNAGIV 98 (260)
T ss_dssp TTCCCEEEECCCCC
T ss_pred CCCCCEEEECCCCC
Confidence 15789999877543
No 401
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=67.69 E-value=22 Score=32.29 Aligned_cols=78 Identities=10% Similarity=0.066 Sum_probs=55.0
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---C------C
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---S------T 402 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---~------~ 402 (451)
.+.+||=.|+ +|+.+.+++..+. .+.+|++++.++..++.+.+.++..+. .+.++.+|..+.... . .
T Consensus 12 ~~k~vlItGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (260)
T 3awd_A 12 DNRVAIVTGG-AQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGH--DVSSVVMDVTNTESVQNAVRSVHEQE 88 (260)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 3667776664 5788888877654 345899999999988877777776654 378888998764311 0 1
Q ss_pred CCcCEEEEcCC
Q 012998 403 VKCDKVLLDAP 413 (451)
Q Consensus 403 ~~fD~VlvD~P 413 (451)
+.+|.|+..+-
T Consensus 89 ~~id~vi~~Ag 99 (260)
T 3awd_A 89 GRVDILVACAG 99 (260)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 36899998664
No 402
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=67.66 E-value=4.4 Score=40.89 Aligned_cols=51 Identities=10% Similarity=0.070 Sum_probs=37.7
Q ss_pred hCCCCCCeEEeecC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 329 VDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 329 l~~~~g~~VLDlca--gpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
.++++|++||=.|| |.|..++++|..++ .+|++++.++.+++.++ .+|.+.
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~G--a~vi~~~~~~~~~~~~~----~lGa~~ 268 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGG--GIPVAVVSSAQKEAAVR----ALGCDL 268 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHH----HTTCCC
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHH----hcCCCE
Confidence 56789999998886 23555666666643 58999999999988764 467764
No 403
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=67.60 E-value=10 Score=34.78 Aligned_cols=80 Identities=15% Similarity=-0.041 Sum_probs=54.7
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCC-CceEEEEeC-CHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---C------
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDI-NKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---S------ 401 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi-~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---~------ 401 (451)
.+.+||=.| |+|+.+.+++..+.. +.+|++++. ++..++.+.+.++..|. .+.++.+|..+.... .
T Consensus 20 ~~k~vlItG-asggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~ 96 (274)
T 1ja9_A 20 AGKVALTTG-AGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA--QGVAIQADISKPSEVVALFDKAVSH 96 (274)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCC--cEEEEEecCCCHHHHHHHHHHHHHH
Confidence 356777555 568888888876643 358999998 88888877777776664 377888898764311 0
Q ss_pred CCCcCEEEEcCCCC
Q 012998 402 TVKCDKVLLDAPCS 415 (451)
Q Consensus 402 ~~~fD~VlvD~PCS 415 (451)
.+.+|.|+..+-..
T Consensus 97 ~~~~d~vi~~Ag~~ 110 (274)
T 1ja9_A 97 FGGLDFVMSNSGME 110 (274)
T ss_dssp HSCEEEEECCCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 13689888766443
No 404
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=67.28 E-value=14 Score=30.70 Aligned_cols=50 Identities=20% Similarity=0.120 Sum_probs=34.7
Q ss_pred hhhhCCCCCCeEEeecCCCchHHHHHHHHcCCC-ceEEEEeCCHHHHHHHHHH
Q 012998 326 VAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQ-GLVYAIDINKGRLRILNET 377 (451)
Q Consensus 326 ~~~l~~~~g~~VLDlcagpG~kT~~la~~~~~~-g~V~AvDi~~~rl~~l~~~ 377 (451)
+..+....+.+|+=+|| |..+..++..+... ..|+.+|.++.+.+.+.+.
T Consensus 13 ~~~~~~~~~~~v~iiG~--G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~ 63 (144)
T 3oj0_A 13 YDIVRKNGGNKILLVGN--GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEK 63 (144)
T ss_dssp HHHHHHHCCCEEEEECC--SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHH
T ss_pred HHHHHhccCCEEEEECC--CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHH
Confidence 34444445889999997 56666666666533 3599999999988765443
No 405
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=67.00 E-value=17 Score=33.98 Aligned_cols=78 Identities=15% Similarity=0.184 Sum_probs=57.3
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~ 402 (451)
.|..+|=-|++. |....+|..+. .+..|+.+|.+++.++.+.+.++..|.+ +.++.+|..+.... ..
T Consensus 6 ~gKvalVTGas~-GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~--~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 6 KNKVVIVTGAGS-GIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKE--VLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC--EEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCc--EEEEEccCCCHHHHHHHHHHHHHHc
Confidence 367777777665 56666665543 4568999999999999999999988864 67888998764311 12
Q ss_pred CCcCEEEEcCC
Q 012998 403 VKCDKVLLDAP 413 (451)
Q Consensus 403 ~~fD~VlvD~P 413 (451)
+..|+++.++-
T Consensus 83 G~iDiLVNNAG 93 (254)
T 4fn4_A 83 SRIDVLCNNAG 93 (254)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCc
Confidence 57899988774
No 406
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=66.93 E-value=14 Score=34.11 Aligned_cols=81 Identities=14% Similarity=0.037 Sum_probs=57.3
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~ 402 (451)
.|.+||=.|+ +|+.+.+++..+-. +.+|+.+|.++..++.+.+.++..+-. .+.++.+|..+.... ..
T Consensus 9 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (262)
T 3pk0_A 9 QGRSVVVTGG-TKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSG-KVIGVQTDVSDRAQCDALAGRAVEEF 86 (262)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSS-CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCC-cEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 3667776665 56778877766543 458999999999999888888777643 378889998764311 01
Q ss_pred CCcCEEEEcCCCC
Q 012998 403 VKCDKVLLDAPCS 415 (451)
Q Consensus 403 ~~fD~VlvD~PCS 415 (451)
+..|.++..+--.
T Consensus 87 g~id~lvnnAg~~ 99 (262)
T 3pk0_A 87 GGIDVVCANAGVF 99 (262)
T ss_dssp SCCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4789999876443
No 407
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=66.53 E-value=18 Score=33.67 Aligned_cols=81 Identities=11% Similarity=0.070 Sum_probs=57.8
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~ 402 (451)
.|.+||=.|+ +|+.+..++..+- .+.+|+.+|.++..++.+.+.++..|.. +.++.+|..+.... ..
T Consensus 25 ~gk~~lVTGa-s~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (271)
T 4ibo_A 25 GGRTALVTGS-SRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHD--AEAVAFDVTSESEIIEAFARLDEQG 101 (271)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCC--EEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc--eEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 3667776664 5677777776654 3458999999999999888888877753 78888998764311 12
Q ss_pred CCcCEEEEcCCCCC
Q 012998 403 VKCDKVLLDAPCSG 416 (451)
Q Consensus 403 ~~fD~VlvD~PCSg 416 (451)
+..|.++..+-.+.
T Consensus 102 g~iD~lv~nAg~~~ 115 (271)
T 4ibo_A 102 IDVDILVNNAGIQF 115 (271)
T ss_dssp CCCCEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 46899998775433
No 408
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=66.51 E-value=3.6 Score=39.59 Aligned_cols=51 Identities=20% Similarity=0.107 Sum_probs=37.3
Q ss_pred hCCCCCC-eEEeecC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 329 VDPQPGQ-SIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 329 l~~~~g~-~VLDlca--gpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
.++++|+ +||-.|| |.|..++++|..++ .+|++++.++++++.+++ +|.+.
T Consensus 145 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~~~~~~~~----lGa~~ 198 (330)
T 1tt7_A 145 NGLSPEKGSVLVTGATGGVGGIAVSMLNKRG--YDVVASTGNREAADYLKQ----LGASE 198 (330)
T ss_dssp TTCCGGGCCEEEESTTSHHHHHHHHHHHHHT--CCEEEEESSSSTHHHHHH----HTCSE
T ss_pred cCcCCCCceEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH----cCCcE
Confidence 3577886 9999997 34556677777654 579999999888877653 67653
No 409
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=66.41 E-value=7 Score=37.90 Aligned_cols=50 Identities=16% Similarity=0.150 Sum_probs=36.1
Q ss_pred hCCCCCCeEEeecC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC
Q 012998 329 VDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN 384 (451)
Q Consensus 329 l~~~~g~~VLDlca--gpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~ 384 (451)
.++++|++||-.|+ |.|..+.+++... +.+|+++|.++.+++.+++ +|.+
T Consensus 165 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~V~~~~~~~~~~~~~~~----~g~~ 216 (347)
T 2hcy_A 165 ANLMAGHWVAISGAAGGLGSLAVQYAKAM--GYRVLGIDGGEGKEELFRS----IGGE 216 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSTTHHHHHHH----TTCC
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHC--CCcEEEEcCCHHHHHHHHH----cCCc
Confidence 36789999999998 3455555666553 3589999999988876543 5654
No 410
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=66.08 E-value=18 Score=33.16 Aligned_cols=79 Identities=19% Similarity=0.113 Sum_probs=57.4
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~ 402 (451)
.|.+||=.|+ +|+.+..++..+. .+..|+.++.+...++.+.+.+...|. .+.++.+|..+.... ..
T Consensus 28 ~~k~vlITGa-s~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 28 SGQVAVVTGA-SRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG--EAESHACDLSHSDAIAAFATGVLAAH 104 (262)
T ss_dssp TTCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--EEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC--ceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 4667777665 5778888876654 345899999999999998888887764 478888998764321 01
Q ss_pred CCcCEEEEcCCC
Q 012998 403 VKCDKVLLDAPC 414 (451)
Q Consensus 403 ~~fD~VlvD~PC 414 (451)
+..|.|+..+-.
T Consensus 105 g~id~lv~~Ag~ 116 (262)
T 3rkr_A 105 GRCDVLVNNAGV 116 (262)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 468999987654
No 411
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=65.76 E-value=12 Score=33.72 Aligned_cols=79 Identities=14% Similarity=0.074 Sum_probs=51.9
Q ss_pred CCeEEeecCCCchHHHHHHHHcCC-CceEEEE-eCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccC---------C
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAI-DINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS---------T 402 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~-~g~V~Av-Di~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~---------~ 402 (451)
+.+||=.|+ +|+.+.+++..+.. +.+|+++ +.++..++.+.+.++..+. .+.++.+|..+..... .
T Consensus 5 ~~~vlItGa-sggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T 2hq1_A 5 GKTAIVTGS-SRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGI--NVVVAKGDVKNPEDVENMVKTAMDAF 81 (247)
T ss_dssp TCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTC--CEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CcEEEEECC-CchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCC--cEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 567776664 57888888776543 3578888 6777777777777766654 3778889987643110 1
Q ss_pred CCcCEEEEcCCCC
Q 012998 403 VKCDKVLLDAPCS 415 (451)
Q Consensus 403 ~~fD~VlvD~PCS 415 (451)
+.+|.|+..+-.+
T Consensus 82 ~~~d~vi~~Ag~~ 94 (247)
T 2hq1_A 82 GRIDILVNNAGIT 94 (247)
T ss_dssp SCCCEEEECC---
T ss_pred CCCCEEEECCCCC
Confidence 3689999877543
No 412
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=65.44 E-value=37 Score=30.70 Aligned_cols=79 Identities=14% Similarity=0.059 Sum_probs=56.9
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~ 402 (451)
.|.+||=.|+ +|+.+.+++..+-. +.+|+.+|.++..++.+.+.++..+. .+.++.+|..+.... ..
T Consensus 8 ~~k~vlITGa-s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 8 ENKVGIVTGS-GGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGG--TAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--EEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3667777775 56777777766543 45899999999999998888877664 477888998764311 01
Q ss_pred CCcCEEEEcCCC
Q 012998 403 VKCDKVLLDAPC 414 (451)
Q Consensus 403 ~~fD~VlvD~PC 414 (451)
+..|.++..+--
T Consensus 85 g~id~li~~Ag~ 96 (253)
T 3qiv_A 85 GGIDYLVNNAAI 96 (253)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 378999987643
No 413
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=65.43 E-value=30 Score=32.04 Aligned_cols=80 Identities=16% Similarity=0.074 Sum_probs=55.8
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~ 402 (451)
.+.+||=.|+ +|+.+..++..+.. +..|++++.++..++.+.+.++..|. .+.++.+|..+.... ..
T Consensus 21 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~ 97 (277)
T 2rhc_B 21 DSEVALVTGA-TSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV--EADGRTCDVRSVPEIEALVAAVVERY 97 (277)
T ss_dssp TSCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEECCCCCHHHHHHHHHHHHHHh
Confidence 3667777775 57778877766543 35899999999988887777776664 377888898754210 12
Q ss_pred CCcCEEEEcCCCC
Q 012998 403 VKCDKVLLDAPCS 415 (451)
Q Consensus 403 ~~fD~VlvD~PCS 415 (451)
+.+|.++..+-..
T Consensus 98 g~iD~lv~~Ag~~ 110 (277)
T 2rhc_B 98 GPVDVLVNNAGRP 110 (277)
T ss_dssp CSCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4689999877533
No 414
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=64.90 E-value=9.5 Score=30.76 Aligned_cols=66 Identities=8% Similarity=0.046 Sum_probs=39.0
Q ss_pred hCCCCCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEE
Q 012998 329 VDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKV 408 (451)
Q Consensus 329 l~~~~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~V 408 (451)
+....-.+|| ++||.|.-|..++.. .+++.++..|+++ +.+...+..++... ...+|+|
T Consensus 13 ~~~~~~~kIl-vvC~sG~gTS~m~~~------------------kl~~~~~~~gi~~-~~i~~~~~~~~~~~-~~~~DlI 71 (110)
T 3czc_A 13 MGRGSMVKVL-TACGNGMGSSMVIKM------------------KVENALRQLGVSD-IESASCSVGEAKGL-ASNYDIV 71 (110)
T ss_dssp -----CEEEE-EECCCCHHHHHHHHH------------------HHHHHHHHTTCCC-EEEEEECHHHHHHH-GGGCSEE
T ss_pred ccccCCcEEE-EECCCcHHHHHHHHH------------------HHHHHHHHcCCCe-EEEEEeeHHHHhhc-cCCCcEE
Confidence 3333334677 888999877777652 4566777788762 33444455444322 1358999
Q ss_pred EEcCCCC
Q 012998 409 LLDAPCS 415 (451)
Q Consensus 409 lvD~PCS 415 (451)
++-++-.
T Consensus 72 i~t~~l~ 78 (110)
T 3czc_A 72 VASNHLI 78 (110)
T ss_dssp EEETTTG
T ss_pred EECCchH
Confidence 9888754
No 415
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=64.89 E-value=9.8 Score=34.53 Aligned_cols=78 Identities=14% Similarity=-0.000 Sum_probs=54.1
Q ss_pred CCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCC-HHHHHHHHHHHHHcCCCceEEEEcCcccccccc---C------C
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDIN-KGRLRILNETAKLHQVNSVIRTIHADLRTFADN---S------T 402 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~-~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---~------~ 402 (451)
|.+||=.| |+|+.+.+++..+.. +.+|++++.+ +..++.+.+.++..+. .+.++.+|..+.... . .
T Consensus 7 ~k~vlVTG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (258)
T 3afn_B 7 GKRVLITG-SSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGG--DAAFFAADLATSEACQQLVDEFVAKF 83 (258)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTC--EEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCC--ceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56777555 468888888876643 3589999998 7777777776766553 478888998764311 0 1
Q ss_pred CCcCEEEEcCCC
Q 012998 403 VKCDKVLLDAPC 414 (451)
Q Consensus 403 ~~fD~VlvD~PC 414 (451)
+.+|.|+..+-.
T Consensus 84 g~id~vi~~Ag~ 95 (258)
T 3afn_B 84 GGIDVLINNAGG 95 (258)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368999987653
No 416
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=64.83 E-value=26 Score=32.31 Aligned_cols=80 Identities=18% Similarity=0.054 Sum_probs=56.6
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~ 402 (451)
.+.+||=.|+ +|+.+..++..+. .+..|+++|.++..++.+.+.++..|. .+.++.+|..+.... ..
T Consensus 30 ~~k~vlITGa-sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~~ 106 (272)
T 1yb1_A 30 TGEIVLITGA-GHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA--KVHTFVVDCSNREDIYSSAKKVKAEI 106 (272)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCC--eEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 3567776664 5788888877654 345899999999998888877777664 378888998764211 12
Q ss_pred CCcCEEEEcCCCC
Q 012998 403 VKCDKVLLDAPCS 415 (451)
Q Consensus 403 ~~fD~VlvD~PCS 415 (451)
+.+|.|+..+-..
T Consensus 107 g~iD~li~~Ag~~ 119 (272)
T 1yb1_A 107 GDVSILVNNAGVV 119 (272)
T ss_dssp CCCSEEEECCCCC
T ss_pred CCCcEEEECCCcC
Confidence 4689999877543
No 417
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=64.72 E-value=26 Score=32.26 Aligned_cols=81 Identities=12% Similarity=-0.028 Sum_probs=55.9
Q ss_pred CCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHH-cCCCceEEEEcCcccccccc---------CC
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKL-HQVNSVIRTIHADLRTFADN---------ST 402 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~-~g~~~~I~~~~~Da~~~~~~---------~~ 402 (451)
|..||=.|++ ||.+..++..+.. +.+|+.+|.++..++.+.+.+.. .+-. .+.++.+|..+.... ..
T Consensus 8 ~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 8 EAVAVVTGGS-SGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGA-RLFASVCDVLDALQVRAFAEACERTL 85 (265)
T ss_dssp TCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCc-eEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 5677777655 6677777765543 45899999999999888888776 4433 377888898764311 02
Q ss_pred CCcCEEEEcCCCCC
Q 012998 403 VKCDKVLLDAPCSG 416 (451)
Q Consensus 403 ~~fD~VlvD~PCSg 416 (451)
+..|.++..+--+.
T Consensus 86 g~id~lvnnAg~~~ 99 (265)
T 3lf2_A 86 GCASILVNNAGQGR 99 (265)
T ss_dssp CSCSEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 46899998775433
No 418
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=64.46 E-value=26 Score=31.78 Aligned_cols=78 Identities=15% Similarity=0.095 Sum_probs=54.9
Q ss_pred CCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CCC
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STV 403 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~~ 403 (451)
|.+||=.|++ |+.+..++..+-. +.+|+.++.++..++.+.+.+...|. .+.++.+|..+.... ..+
T Consensus 7 ~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~~~~~~~~~~~~~~~~~g 83 (247)
T 2jah_A 7 GKVALITGAS-SGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGA--KVHVLELDVADRQGVDAAVASTVEALG 83 (247)
T ss_dssp TCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5677777754 7778877766543 35899999999998888777776664 377888898764211 014
Q ss_pred CcCEEEEcCCC
Q 012998 404 KCDKVLLDAPC 414 (451)
Q Consensus 404 ~fD~VlvD~PC 414 (451)
.+|.++..+--
T Consensus 84 ~id~lv~nAg~ 94 (247)
T 2jah_A 84 GLDILVNNAGI 94 (247)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999987643
No 419
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=64.22 E-value=11 Score=34.06 Aligned_cols=78 Identities=18% Similarity=0.132 Sum_probs=51.9
Q ss_pred CCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHH-HHcCCCceEEEEcCcccccccc---C------C
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETA-KLHQVNSVIRTIHADLRTFADN---S------T 402 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~-~~~g~~~~I~~~~~Da~~~~~~---~------~ 402 (451)
+.+||=.| |+|+.+.+++..+.. +..|++++.++..++.+.+.+ +..+ ..+.++.+|..+.... . .
T Consensus 2 ~k~vlItG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (250)
T 2cfc_A 2 SRVAIVTG-ASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYA--DKVLRVRADVADEGDVNAAIAATMEQF 78 (250)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTG--GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 34566666 457888888776543 358999999998887766655 3333 2477888898764311 0 1
Q ss_pred CCcCEEEEcCCC
Q 012998 403 VKCDKVLLDAPC 414 (451)
Q Consensus 403 ~~fD~VlvD~PC 414 (451)
+.+|.|+..+-.
T Consensus 79 ~~id~li~~Ag~ 90 (250)
T 2cfc_A 79 GAIDVLVNNAGI 90 (250)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368999987643
No 420
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=63.97 E-value=29 Score=31.89 Aligned_cols=80 Identities=14% Similarity=-0.052 Sum_probs=54.6
Q ss_pred CCeEEeecCCCchHHHHHHHHcCC-CceEEEEeC-CHHHHHHHHHHHHHc-CCCceEEEEcCccccc----ccc------
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDI-NKGRLRILNETAKLH-QVNSVIRTIHADLRTF----ADN------ 400 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi-~~~rl~~l~~~~~~~-g~~~~I~~~~~Da~~~----~~~------ 400 (451)
|.+||=.| |+|+.+.+++..+-. +.+|+.++. ++..++.+.+.+... |. .+.++.+|..+. ...
T Consensus 11 ~k~~lVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~ 87 (276)
T 1mxh_A 11 CPAAVITG-GARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAG--SAVLCKGDLSLSSSLLDCCEDIIDC 87 (276)
T ss_dssp CCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT--CEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCC--ceEEEeccCCCccccHHHHHHHHHH
Confidence 55677555 557888888776543 358999999 988888777777654 43 377888888765 211
Q ss_pred ---CCCCcCEEEEcCCCCC
Q 012998 401 ---STVKCDKVLLDAPCSG 416 (451)
Q Consensus 401 ---~~~~fD~VlvD~PCSg 416 (451)
..+..|.++..+-...
T Consensus 88 ~~~~~g~id~lv~nAg~~~ 106 (276)
T 1mxh_A 88 SFRAFGRCDVLVNNASAYY 106 (276)
T ss_dssp HHHHHSCCCEEEECCCCCC
T ss_pred HHHhcCCCCEEEECCCCCC
Confidence 0136899998775443
No 421
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=63.97 E-value=4.4 Score=39.32 Aligned_cols=47 Identities=21% Similarity=0.205 Sum_probs=34.8
Q ss_pred hhCCCCCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHH
Q 012998 328 VVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNE 376 (451)
Q Consensus 328 ~l~~~~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~ 376 (451)
..++ +|++||-.|+|+ |..++++|..++ ..+|+++|.++++++.+++
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~~~~~~~~~~~~ 207 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASG-AGPILVSDPNPYRLAFARP 207 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTT-CCSEEEECSCHHHHGGGTT
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH
Confidence 4567 899999999854 455666666653 2389999999998877654
No 422
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=63.63 E-value=8 Score=37.29 Aligned_cols=52 Identities=19% Similarity=0.247 Sum_probs=37.5
Q ss_pred hhCCCCCCeEEeecC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC
Q 012998 328 VVDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN 384 (451)
Q Consensus 328 ~l~~~~g~~VLDlca--gpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~ 384 (451)
..++++|++||-.|| |.|..+.+++...+ .+|+++|.++.+++.+++ .+|.+
T Consensus 150 ~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G--~~V~~~~~~~~~~~~~~~---~~g~~ 203 (345)
T 2j3h_A 150 VCSPKEGETVYVSAASGAVGQLVGQLAKMMG--CYVVGSAGSKEKVDLLKT---KFGFD 203 (345)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH---TSCCS
T ss_pred HhCCCCCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH---HcCCc
Confidence 346789999999997 34555556666543 589999999998887653 35664
No 423
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=63.32 E-value=6.4 Score=33.24 Aligned_cols=74 Identities=11% Similarity=-0.011 Sum_probs=39.0
Q ss_pred CCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc-CCCCcCEEEEcCCCCC
Q 012998 342 AAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN-STVKCDKVLLDAPCSG 416 (451)
Q Consensus 342 agpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~-~~~~fD~VlvD~PCSg 416 (451)
.|+++.+......+...-+|.-+|-++.....++..++..|... +.....+..+.... ....+|+|++|.-..+
T Consensus 9 ~~~~~~~~~~~~M~~~~~~ILivdd~~~~~~~l~~~L~~~~~~~-~v~~~~~~~~al~~l~~~~~dlvilD~~l~~ 83 (164)
T 3t8y_A 9 HHSSGLVPRGSHMTDRVIRVLVVDDSAFMRMVLKDIIDSQPDMK-VVGFAKDGLEAVEKAIELKPDVITMDIEMPN 83 (164)
T ss_dssp ---------------CCEEEEEECSCHHHHHHHHHHHHTSTTEE-EEEEESSHHHHHHHHHHHCCSEEEECSSCSS
T ss_pred cccCCcccCccccccCccEEEEEcCCHHHHHHHHHHHhcCCCeE-EEEecCCHHHHHHHhccCCCCEEEEeCCCCC
Confidence 46677777666665555689999999999999999998876322 22234444332211 1246999999965443
No 424
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=63.18 E-value=20 Score=33.67 Aligned_cols=79 Identities=11% Similarity=-0.067 Sum_probs=54.2
Q ss_pred CCCeEEeecCCCc-hHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------C
Q 012998 333 PGQSIVDCCAAPG-GKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------S 401 (451)
Q Consensus 333 ~g~~VLDlcagpG-~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~ 401 (451)
.|.+||=.|++.| |.+..++..+- .+..|+.++.++...+.+.+..+..+ .+.++.+|..+.... .
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG---AFVAGHCDVADAASIDAVFETLEKK 106 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT---CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHHHh
Confidence 4778998888764 56666665543 34589999999877676666666655 267888898764311 1
Q ss_pred CCCcCEEEEcCCC
Q 012998 402 TVKCDKVLLDAPC 414 (451)
Q Consensus 402 ~~~fD~VlvD~PC 414 (451)
.+..|.++..+--
T Consensus 107 ~g~iD~lVnnAG~ 119 (293)
T 3grk_A 107 WGKLDFLVHAIGF 119 (293)
T ss_dssp TSCCSEEEECCCC
T ss_pred cCCCCEEEECCcc
Confidence 2578999987643
No 425
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=63.13 E-value=22 Score=33.04 Aligned_cols=79 Identities=13% Similarity=0.022 Sum_probs=55.8
Q ss_pred CCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CCC
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STV 403 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~~ 403 (451)
+.+||=.|++ ||.+..++..+. .+.+|+.++.++..++.+.+.++..|. .+.++.+|..+.... ..+
T Consensus 4 ~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 4 DKVILITGAS-GGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGG--TALAQVLDVTDRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp TCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC--EEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4566666655 677777776654 345899999999999998888887764 377888898764211 024
Q ss_pred CcCEEEEcCCCC
Q 012998 404 KCDKVLLDAPCS 415 (451)
Q Consensus 404 ~fD~VlvD~PCS 415 (451)
..|.++..+--.
T Consensus 81 ~iD~lVnnAG~~ 92 (264)
T 3tfo_A 81 RIDVLVNNAGVM 92 (264)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999876443
No 426
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=62.86 E-value=19 Score=33.41 Aligned_cols=83 Identities=11% Similarity=-0.030 Sum_probs=57.6
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~ 402 (451)
.|.+||=.| |+||.+..++..+- .+..|+.++.++..++.+.+.++..|.. +.++..|..+.... ..
T Consensus 27 ~~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (270)
T 3ftp_A 27 DKQVAIVTG-ASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLE--GRGAVLNVNDATAVDALVESTLKEF 103 (270)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCC--CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc--EEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 356677666 55677777776554 3458999999999999988888887764 56777887764211 01
Q ss_pred CCcCEEEEcCCCCCcc
Q 012998 403 VKCDKVLLDAPCSGLG 418 (451)
Q Consensus 403 ~~fD~VlvD~PCSg~G 418 (451)
+..|.++..+--...+
T Consensus 104 g~iD~lvnnAg~~~~~ 119 (270)
T 3ftp_A 104 GALNVLVNNAGITQDQ 119 (270)
T ss_dssp SCCCEEEECCCCCCCB
T ss_pred CCCCEEEECCCCCCCC
Confidence 4689999877544433
No 427
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=62.68 E-value=18 Score=33.14 Aligned_cols=78 Identities=17% Similarity=0.100 Sum_probs=55.2
Q ss_pred CCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CCC
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STV 403 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~~ 403 (451)
|.+||=.|+ +||.+..++..+-. +.+|+.+|.++..++.+.+.++..+. .+.++.+|..+.... ..+
T Consensus 6 ~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g 82 (257)
T 3imf_A 6 EKVVIITGG-SSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPG--QILTVQMDVRNTDDIQKMIEQIDEKFG 82 (257)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTT--CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 566776665 56778877766543 45899999999999988888776654 478888998764311 014
Q ss_pred CcCEEEEcCCC
Q 012998 404 KCDKVLLDAPC 414 (451)
Q Consensus 404 ~fD~VlvD~PC 414 (451)
..|.++..+--
T Consensus 83 ~id~lv~nAg~ 93 (257)
T 3imf_A 83 RIDILINNAAG 93 (257)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999987643
No 428
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=62.56 E-value=26 Score=31.73 Aligned_cols=79 Identities=16% Similarity=0.051 Sum_probs=54.1
Q ss_pred CCeEEeecCCCchHHHHHHHHcCC-CceEEEEeC-CHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CC
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDI-NKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi-~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~ 402 (451)
|.+||=.| |+|+.+..++..+-. +.+|++++. ++..++.+.+.++..|. .+.++.+|..+.... ..
T Consensus 4 ~k~vlVTG-as~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (246)
T 2uvd_A 4 GKVALVTG-ASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGS--DAIAVRADVANAEDVTNMVKQTVDVF 80 (246)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 55677555 557888888776543 358999999 88888887777776654 367888898764311 01
Q ss_pred CCcCEEEEcCCCC
Q 012998 403 VKCDKVLLDAPCS 415 (451)
Q Consensus 403 ~~fD~VlvD~PCS 415 (451)
+..|.++..+-..
T Consensus 81 g~id~lv~nAg~~ 93 (246)
T 2uvd_A 81 GQVDILVNNAGVT 93 (246)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689999876543
No 429
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=62.34 E-value=9.9 Score=36.45 Aligned_cols=44 Identities=16% Similarity=0.117 Sum_probs=32.3
Q ss_pred hCCCCCCeEEeecC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHH
Q 012998 329 VDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRIL 374 (451)
Q Consensus 329 l~~~~g~~VLDlca--gpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l 374 (451)
.++++|++||-.|| |.|..+.+++... +.+|+++|.++++++.+
T Consensus 141 ~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~ 186 (333)
T 1v3u_A 141 CGVKGGETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKIAYL 186 (333)
T ss_dssp SCCCSSCEEEEESTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHH
T ss_pred hCCCCCCEEEEecCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHH
Confidence 46789999999997 3444444555543 35899999999988776
No 430
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=62.06 E-value=23 Score=32.46 Aligned_cols=81 Identities=11% Similarity=0.041 Sum_probs=57.0
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~ 402 (451)
.|.+||=.|++ ||.+.+++..+-. +.+|+.+|.+...++.+.+.++..|. .+.++.+|..+.... ..
T Consensus 11 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 11 NDAVAIVTGAA-AGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGG--KAIGLECNVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp TTCEEEECSCS-SHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 36677766655 6677777765532 45899999999999998888887774 377888998764311 01
Q ss_pred CCcCEEEEcCCCCC
Q 012998 403 VKCDKVLLDAPCSG 416 (451)
Q Consensus 403 ~~fD~VlvD~PCSg 416 (451)
+..|.++..+--+.
T Consensus 88 g~id~lv~nAg~~~ 101 (256)
T 3gaf_A 88 GKITVLVNNAGGGG 101 (256)
T ss_dssp SCCCEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 47899998775443
No 431
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=61.64 E-value=5 Score=40.03 Aligned_cols=46 Identities=13% Similarity=0.150 Sum_probs=33.4
Q ss_pred CCeEEeecCCCchHHHHHHHHc--------------CCCceEEEEeCCHHHHHHHHHHHH
Q 012998 334 GQSIVDCCAAPGGKTLYMASCL--------------SGQGLVYAIDINKGRLRILNETAK 379 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~--------------~~~g~V~AvDi~~~rl~~l~~~~~ 379 (451)
..+|+|+|||+|..|+.+...+ .+.-.|+.+|+-..-...+=+.+.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~ 112 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLP 112 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSC
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhh
Confidence 5789999999999999884332 134678888887776655555544
No 432
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=61.54 E-value=27 Score=32.41 Aligned_cols=80 Identities=16% Similarity=0.054 Sum_probs=54.7
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~ 402 (451)
.|.+||=.|+ +|+.+..++..+.. +.+|+++|.++..++.+.+.+...| .+.++.+|..+.... ..
T Consensus 28 ~~k~vlVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (276)
T 2b4q_A 28 AGRIALVTGG-SRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG---DCQAIPADLSSEAGARRLAQALGELS 103 (276)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS---CEEECCCCTTSHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---ceEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 3667776665 57788877766543 4589999999988887776665544 377888898764210 12
Q ss_pred CCcCEEEEcCCCCC
Q 012998 403 VKCDKVLLDAPCSG 416 (451)
Q Consensus 403 ~~fD~VlvD~PCSg 416 (451)
+.+|.++..+--..
T Consensus 104 g~iD~lvnnAg~~~ 117 (276)
T 2b4q_A 104 ARLDILVNNAGTSW 117 (276)
T ss_dssp SCCSEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 47899998775433
No 433
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=61.42 E-value=26 Score=31.36 Aligned_cols=79 Identities=16% Similarity=0.014 Sum_probs=52.9
Q ss_pred CeEEeecCCCchHHHHHHHHcCC-CceEEE-EeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CCC
Q 012998 335 QSIVDCCAAPGGKTLYMASCLSG-QGLVYA-IDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STV 403 (451)
Q Consensus 335 ~~VLDlcagpG~kT~~la~~~~~-~g~V~A-vDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~~ 403 (451)
.+||= .-|+|+.+.+++..+-. +..|++ .+.++..++.+.+.++..+. .+.++.+|..+.... ..+
T Consensus 2 k~vlV-TGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (244)
T 1edo_A 2 PVVVV-TGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGG--QAITFGGDVSKEADVEAMMKTAIDAWG 78 (244)
T ss_dssp CEEEE-TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTC--EEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred CEEEE-eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC--cEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 35554 44568888888876643 357888 48898888887777776653 477888898764311 023
Q ss_pred CcCEEEEcCCCCC
Q 012998 404 KCDKVLLDAPCSG 416 (451)
Q Consensus 404 ~fD~VlvD~PCSg 416 (451)
.+|.|+..+-...
T Consensus 79 ~id~li~~Ag~~~ 91 (244)
T 1edo_A 79 TIDVVVNNAGITR 91 (244)
T ss_dssp CCSEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 6899998765443
No 434
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=61.34 E-value=31 Score=31.95 Aligned_cols=81 Identities=15% Similarity=0.038 Sum_probs=57.4
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCc-eEEEEcCcccccccc---------C
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNS-VIRTIHADLRTFADN---------S 401 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~~-~I~~~~~Da~~~~~~---------~ 401 (451)
.|.+||=.|+ +|+.+.+++..+- .+.+|+.+|.++..++.+.+.++..+..+ .+.++.+|..+.... .
T Consensus 10 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 10 QDRTYLVTGG-GSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 3667777775 5677777776554 34589999999999998888888776522 478888998764311 0
Q ss_pred CCCcCEEEEcCCC
Q 012998 402 TVKCDKVLLDAPC 414 (451)
Q Consensus 402 ~~~fD~VlvD~PC 414 (451)
.+..|.++..+--
T Consensus 89 ~g~id~lv~nAg~ 101 (281)
T 3svt_A 89 HGRLHGVVHCAGG 101 (281)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 1468999987653
No 435
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=61.33 E-value=9.5 Score=37.13 Aligned_cols=55 Identities=15% Similarity=0.238 Sum_probs=34.4
Q ss_pred hCCCCCCeEEeecC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 329 VDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 329 l~~~~g~~VLDlca--gpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
.++++|++||=.|+ |.|..++++|..++ ...|..++.++.+-+. .+.++.+|.+.
T Consensus 163 ~~~~~g~~VlV~Ga~G~vG~~aiqlak~~G-a~vi~~~~~~~~~~~~-~~~~~~lGa~~ 219 (357)
T 1zsy_A 163 EQLQPGDSVIQNASNSGVGQAVIQIAAALG-LRTINVVRDRPDIQKL-SDRLKSLGAEH 219 (357)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEECCCSCHHHH-HHHHHHTTCSE
T ss_pred hccCCCCEEEEeCCcCHHHHHHHHHHHHcC-CEEEEEecCccchHHH-HHHHHhcCCcE
Confidence 46889999999997 45667778888764 2345555655432211 12345678764
No 436
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=61.25 E-value=13 Score=34.75 Aligned_cols=76 Identities=14% Similarity=0.084 Sum_probs=52.2
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc-----CCCCcC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN-----STVKCD 406 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~-----~~~~fD 406 (451)
.|.+||=.|++ |+.+.+++..+.. +.+|+.++.++..++.+.+.+ + ..+.++..|..+.... .-+..|
T Consensus 15 ~gk~vlVTGas-~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dl~d~~~v~~~~~~~~~iD 88 (291)
T 3rd5_A 15 AQRTVVITGAN-SGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---A--GQVEVRELDLQDLSSVRRFADGVSGAD 88 (291)
T ss_dssp TTCEEEEECCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---S--SEEEEEECCTTCHHHHHHHHHTCCCEE
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---c--CCeeEEEcCCCCHHHHHHHHHhcCCCC
Confidence 46777776655 7788888776543 458999999998877655433 2 3588899998764321 114689
Q ss_pred EEEEcCCC
Q 012998 407 KVLLDAPC 414 (451)
Q Consensus 407 ~VlvD~PC 414 (451)
.++..+--
T Consensus 89 ~lv~nAg~ 96 (291)
T 3rd5_A 89 VLINNAGI 96 (291)
T ss_dssp EEEECCCC
T ss_pred EEEECCcC
Confidence 99987643
No 437
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=61.25 E-value=19 Score=32.42 Aligned_cols=69 Identities=19% Similarity=0.238 Sum_probs=46.9
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc---cCCCCcCEEE
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---NSTVKCDKVL 409 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~---~~~~~fD~Vl 409 (451)
...+|+=+|+ |..+..+++.+...|.|+++|.++.+++.+. .| +.++.+|+.+... ..-...|.|+
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g~v~vid~~~~~~~~~~-----~~----~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKKVLR-----SG----ANFVHGDPTRVSDLEKANVRGARAVI 76 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSEEEEEESCGGGHHHHHH-----TT----CEEEESCTTCHHHHHHTTCTTCSEEE
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCCeEEEEECCHHHHHHHh-----cC----CeEEEcCCCCHHHHHhcCcchhcEEE
Confidence 3457776665 7888888888876555999999999887654 23 4567888875421 1135689988
Q ss_pred EcC
Q 012998 410 LDA 412 (451)
Q Consensus 410 vD~ 412 (451)
+-.
T Consensus 77 ~~~ 79 (234)
T 2aef_A 77 VDL 79 (234)
T ss_dssp ECC
T ss_pred EcC
Confidence 743
No 438
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=61.23 E-value=12 Score=35.83 Aligned_cols=52 Identities=13% Similarity=0.101 Sum_probs=35.7
Q ss_pred hhhCCCCCCeEEeec-CC-CchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 327 AVVDPQPGQSIVDCC-AA-PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 327 ~~l~~~~g~~VLDlc-ag-pG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
....+++|++||=.| +| .|..++++|..++ .+|++++ +..+++. ++.+|.+.
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~G--a~vi~~~-~~~~~~~----~~~lGa~~ 199 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKG--TTVITTA-SKRNHAF----LKALGAEQ 199 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEE-CHHHHHH----HHHHTCSE
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcC--CEEEEEe-ccchHHH----HHHcCCCE
Confidence 345788999999885 33 4666777777753 5899987 5555544 45578864
No 439
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=61.22 E-value=24 Score=32.23 Aligned_cols=77 Identities=8% Similarity=-0.035 Sum_probs=53.9
Q ss_pred CCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---C-------C
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---S-------T 402 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---~-------~ 402 (451)
+.+||=.| |+|+.+.+++..+- .+..|++++.++..++.+.+.++..+. .+.++.+|..+.... . .
T Consensus 14 ~k~vlITG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~ 90 (266)
T 1xq1_A 14 AKTVLVTG-GTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF--QVTGSVCDASLRPEREKLMQTVSSMFG 90 (266)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--eeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 56777555 46788888877654 345899999999988887777776654 377888888754211 0 1
Q ss_pred CCcCEEEEcCC
Q 012998 403 VKCDKVLLDAP 413 (451)
Q Consensus 403 ~~fD~VlvD~P 413 (451)
+.+|.|+..+-
T Consensus 91 ~~id~li~~Ag 101 (266)
T 1xq1_A 91 GKLDILINNLG 101 (266)
T ss_dssp TCCSEEEEECC
T ss_pred CCCcEEEECCC
Confidence 56899998764
No 440
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=61.21 E-value=15 Score=32.58 Aligned_cols=70 Identities=16% Similarity=0.153 Sum_probs=48.4
Q ss_pred eEEeecCCCchHHHHHHHHcCCCc-eEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccc-ccc--cCCCCcCEEEEc
Q 012998 336 SIVDCCAAPGGKTLYMASCLSGQG-LVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT-FAD--NSTVKCDKVLLD 411 (451)
Q Consensus 336 ~VLDlcagpG~kT~~la~~~~~~g-~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~-~~~--~~~~~fD~VlvD 411 (451)
+||=.| |+|+.+.+++..+...| .|++++.++..+..+ . .++++.+|..+ ... ..-..+|.|+.-
T Consensus 2 ~ilItG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---------~-~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ 70 (219)
T 3dqp_A 2 KIFIVG-STGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---------N-NVKAVHFDVDWTPEEMAKQLHGMDAIINV 70 (219)
T ss_dssp EEEEES-TTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---------T-TEEEEECCTTSCHHHHHTTTTTCSEEEEC
T ss_pred eEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---------C-CceEEEecccCCHHHHHHHHcCCCEEEEC
Confidence 466455 57899999988776554 899999998654321 3 37889999887 321 123468999987
Q ss_pred CCCCC
Q 012998 412 APCSG 416 (451)
Q Consensus 412 ~PCSg 416 (451)
+..+.
T Consensus 71 ag~~~ 75 (219)
T 3dqp_A 71 SGSGG 75 (219)
T ss_dssp CCCTT
T ss_pred CcCCC
Confidence 66544
No 441
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=60.88 E-value=46 Score=29.63 Aligned_cols=79 Identities=18% Similarity=0.012 Sum_probs=54.2
Q ss_pred CCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHH-HcCCCceEEEEcCcccccccc---C------C
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAK-LHQVNSVIRTIHADLRTFADN---S------T 402 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~-~~g~~~~I~~~~~Da~~~~~~---~------~ 402 (451)
+.+||=.|+ +|+.+.+++..+.. +..|+.++.+...++.+.+.+. ..|. .+.++.+|..+.... . .
T Consensus 2 ~k~vlITGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 2 MKVAVITGA-SRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGV--EVFYHHLDVSKAESVEEFSKKVLERF 78 (235)
T ss_dssp CCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC--CEEEEECCTTCHHHHHHHCC-HHHHH
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC--eEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 445666664 57788887776643 3589999999999988877775 4454 378888998764321 1 1
Q ss_pred CCcCEEEEcCCCC
Q 012998 403 VKCDKVLLDAPCS 415 (451)
Q Consensus 403 ~~fD~VlvD~PCS 415 (451)
+..|.++..+--+
T Consensus 79 g~id~li~~Ag~~ 91 (235)
T 3l77_A 79 GDVDVVVANAGLG 91 (235)
T ss_dssp SSCSEEEECCCCC
T ss_pred CCCCEEEECCccc
Confidence 3689999876543
No 442
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=60.69 E-value=11 Score=36.49 Aligned_cols=77 Identities=10% Similarity=0.031 Sum_probs=53.1
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCC--c-eEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc--CCCCcCE
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQ--G-LVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN--STVKCDK 407 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~--g-~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~--~~~~fD~ 407 (451)
.+.+||=.| |+|+.+.+++..+-.. . .|++++.++.....+.+.+. -. .+.++.+|.++.... .-..+|.
T Consensus 20 ~~k~vlVTG-atG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~---~~-~v~~~~~Dl~d~~~l~~~~~~~D~ 94 (344)
T 2gn4_A 20 DNQTILITG-GTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN---DP-RMRFFIGDVRDLERLNYALEGVDI 94 (344)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC---CT-TEEEEECCTTCHHHHHHHTTTCSE
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc---CC-CEEEEECCCCCHHHHHHHHhcCCE
Confidence 366788555 5689999888766433 3 89999999988776665543 12 378889998764321 1246899
Q ss_pred EEEcCCC
Q 012998 408 VLLDAPC 414 (451)
Q Consensus 408 VlvD~PC 414 (451)
|+.-+.-
T Consensus 95 Vih~Aa~ 101 (344)
T 2gn4_A 95 CIHAAAL 101 (344)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9987653
No 443
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=60.61 E-value=34 Score=32.08 Aligned_cols=79 Identities=16% Similarity=0.050 Sum_probs=54.9
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~ 402 (451)
.|.+||=.|+ +|+.+..++..+- .+..|++++.++..++.+.+.++..|.. +.++.+|..+.... ..
T Consensus 33 ~~k~vlVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~Dv~d~~~v~~~~~~~~~~~ 109 (291)
T 3cxt_A 33 KGKIALVTGA-SYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGIN--AHGYVCDVTDEDGIQAMVAQIESEV 109 (291)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCC--CEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe--EEEEEecCCCHHHHHHHHHHHHHHc
Confidence 3667776665 5778887776654 3458999999999888877777766643 66788887754210 12
Q ss_pred CCcCEEEEcCCC
Q 012998 403 VKCDKVLLDAPC 414 (451)
Q Consensus 403 ~~fD~VlvD~PC 414 (451)
+.+|.++..+-.
T Consensus 110 g~iD~lvnnAg~ 121 (291)
T 3cxt_A 110 GIIDILVNNAGI 121 (291)
T ss_dssp CCCCEEEECCCC
T ss_pred CCCcEEEECCCc
Confidence 468999987743
No 444
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=60.54 E-value=12 Score=38.31 Aligned_cols=68 Identities=19% Similarity=0.203 Sum_probs=48.1
Q ss_pred CCeEEeecCCCchHHHHHHHHcCCCc-eEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---CCCCcCEEE
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSGQG-LVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---STVKCDKVL 409 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~~g-~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---~~~~fD~Vl 409 (451)
.++|+=+|| |..+.++|+.+...| .|+.+|.++++++.+.+.+ + +.+++||+.+..-. .-+..|.++
T Consensus 3 ~M~iiI~G~--G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~---~----~~~i~Gd~~~~~~L~~Agi~~ad~~i 73 (461)
T 4g65_A 3 AMKIIILGA--GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY---D----LRVVNGHASHPDVLHEAGAQDADMLV 73 (461)
T ss_dssp CEEEEEECC--SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS---S----CEEEESCTTCHHHHHHHTTTTCSEEE
T ss_pred cCEEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc---C----cEEEEEcCCCHHHHHhcCCCcCCEEE
Confidence 356665555 577888898886555 6999999999998876543 3 45688999875321 135688887
Q ss_pred E
Q 012998 410 L 410 (451)
Q Consensus 410 v 410 (451)
+
T Consensus 74 a 74 (461)
T 4g65_A 74 A 74 (461)
T ss_dssp E
T ss_pred E
Confidence 6
No 445
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=60.40 E-value=44 Score=31.35 Aligned_cols=81 Identities=19% Similarity=0.142 Sum_probs=55.4
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEEcCcccccccc---------C
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVN-SVIRTIHADLRTFADN---------S 401 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~-~~I~~~~~Da~~~~~~---------~ 401 (451)
.|.+||=.|+ +|+.+..++..+- .+..|+.++.++..++.+.+.+...|.. ..+.++.+|..+.... .
T Consensus 25 ~~k~vlVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 25 SGKSVIITGS-SNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 103 (297)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence 3567776665 5778888876654 3458999999999988887777665531 1377888898764311 0
Q ss_pred CCCcCEEEEcCCC
Q 012998 402 TVKCDKVLLDAPC 414 (451)
Q Consensus 402 ~~~fD~VlvD~PC 414 (451)
.+.+|.++..+-.
T Consensus 104 ~g~iD~lvnnAG~ 116 (297)
T 1xhl_A 104 FGKIDILVNNAGA 116 (297)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 1468999987753
No 446
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=60.14 E-value=43 Score=30.38 Aligned_cols=77 Identities=13% Similarity=-0.006 Sum_probs=53.2
Q ss_pred CeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CCCC
Q 012998 335 QSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STVK 404 (451)
Q Consensus 335 ~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~~~ 404 (451)
.+||=.| |+|+.+..++..+.. +.+|++++.++..++.+.+.+...|. .+.++.+|..+.... ..+.
T Consensus 3 k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 79 (256)
T 1geg_A 3 KVALVTG-AGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG--HAVAVKVDVSDRDQVFAAVEQARKTLGG 79 (256)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred CEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 4566555 457788888766543 35899999999988887777766664 367888898764311 1247
Q ss_pred cCEEEEcCCC
Q 012998 405 CDKVLLDAPC 414 (451)
Q Consensus 405 fD~VlvD~PC 414 (451)
+|.++..+-.
T Consensus 80 id~lv~nAg~ 89 (256)
T 1geg_A 80 FDVIVNNAGV 89 (256)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999987743
No 447
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=59.75 E-value=8.5 Score=32.21 Aligned_cols=66 Identities=18% Similarity=0.088 Sum_probs=44.9
Q ss_pred HcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc-cCCCCcCEEEEc---CCCCCccccc
Q 012998 354 CLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD-NSTVKCDKVLLD---APCSGLGVLS 421 (451)
Q Consensus 354 ~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~-~~~~~fD~VlvD---~PCSg~G~lr 421 (451)
.|...-+|.-||=++.....++..++..|+.. +. ...|+..... .....||+|++| |-.+|.-+++
T Consensus 8 ~m~k~~rILiVDD~~~~r~~l~~~L~~~G~~~-v~-~a~~g~~al~~~~~~~~DlillD~~MP~mdG~el~~ 77 (134)
T 3to5_A 8 ILNKNMKILIVDDFSTMRRIVKNLLRDLGFNN-TQ-EADDGLTALPMLKKGDFDFVVTDWNMPGMQGIDLLK 77 (134)
T ss_dssp -CCTTCCEEEECSCHHHHHHHHHHHHHTTCCC-EE-EESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHH
T ss_pred HhCCCCEEEEEeCCHHHHHHHHHHHHHcCCcE-EE-EECCHHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHH
Confidence 34444589999999999999999999999864 43 3345443221 113579999999 4566655543
No 448
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=59.71 E-value=32 Score=32.70 Aligned_cols=83 Identities=22% Similarity=0.141 Sum_probs=56.2
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCC------------HHHHHHHHHHHHHcCCCceEEEEcCccccccc
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDIN------------KGRLRILNETAKLHQVNSVIRTIHADLRTFAD 399 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~------------~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~ 399 (451)
.|.+||=.|++ ||.+..++..+- .+..|+.+|.+ ...++...+.+...|. .+.++.+|..+...
T Consensus 45 ~gk~~lVTGas-~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~ 121 (317)
T 3oec_A 45 QGKVAFITGAA-RGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGR--RIIARQADVRDLAS 121 (317)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCC--eEEEEECCCCCHHH
Confidence 46677766655 677777776554 34589999986 7777777777777664 37788899876431
Q ss_pred c---------CCCCcCEEEEcCCCCCcc
Q 012998 400 N---------STVKCDKVLLDAPCSGLG 418 (451)
Q Consensus 400 ~---------~~~~fD~VlvD~PCSg~G 418 (451)
. ..+..|+++..+-.+..+
T Consensus 122 v~~~~~~~~~~~g~iD~lVnnAg~~~~~ 149 (317)
T 3oec_A 122 LQAVVDEALAEFGHIDILVSNVGISNQG 149 (317)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCB
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 1 014789999977554444
No 449
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=59.60 E-value=29 Score=31.96 Aligned_cols=81 Identities=14% Similarity=0.042 Sum_probs=56.2
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHH-cCCCceEEEEcCcccccccc---------C
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKL-HQVNSVIRTIHADLRTFADN---------S 401 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~-~g~~~~I~~~~~Da~~~~~~---------~ 401 (451)
.|.+||=.|++ |+.+..++..+-. +.+|+.++.++..++.+.+.+.. .+. .+.++.+|..+.... .
T Consensus 19 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~ 95 (266)
T 4egf_A 19 DGKRALITGAT-KGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGT--DVHTVAIDLAEPDAPAELARRAAEA 95 (266)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC--CEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC--cEEEEEecCCCHHHHHHHHHHHHHH
Confidence 36677766654 6777777766543 45899999999999888777765 454 378888998764321 0
Q ss_pred CCCcCEEEEcCCCCC
Q 012998 402 TVKCDKVLLDAPCSG 416 (451)
Q Consensus 402 ~~~fD~VlvD~PCSg 416 (451)
.+..|.++..+--..
T Consensus 96 ~g~id~lv~nAg~~~ 110 (266)
T 4egf_A 96 FGGLDVLVNNAGISH 110 (266)
T ss_dssp HTSCSEEEEECCCCC
T ss_pred cCCCCEEEECCCcCC
Confidence 147899998775443
No 450
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=59.53 E-value=36 Score=31.09 Aligned_cols=79 Identities=18% Similarity=0.123 Sum_probs=53.7
Q ss_pred CCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHc-CCCceEEEEcCcccccccc---------CC
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLH-QVNSVIRTIHADLRTFADN---------ST 402 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~~-g~~~~I~~~~~Da~~~~~~---------~~ 402 (451)
|.+||=.|+ +|+.+.+++..+-. +.+|++++.++..++.+.+.+... |. .+.++.+|..+.... ..
T Consensus 7 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (263)
T 3ai3_A 7 GKVAVITGS-SSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGV--RVLEVAVDVATPEGVDAVVESVRSSF 83 (263)
T ss_dssp TCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC--CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECC-CchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCC--ceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 567776665 57788888776543 358999999998888776666554 53 377888898764211 01
Q ss_pred CCcCEEEEcCCCC
Q 012998 403 VKCDKVLLDAPCS 415 (451)
Q Consensus 403 ~~fD~VlvD~PCS 415 (451)
+..|.++..+--.
T Consensus 84 g~id~lv~~Ag~~ 96 (263)
T 3ai3_A 84 GGADILVNNAGTG 96 (263)
T ss_dssp SSCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689999877543
No 451
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=59.51 E-value=32 Score=31.52 Aligned_cols=80 Identities=19% Similarity=0.137 Sum_probs=55.4
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~ 402 (451)
.|.+||=.|+ +|+.+..++..+-. +..|+.++.++..++.+.+.+...|. .+.++.+|..+.... ..
T Consensus 6 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (262)
T 1zem_A 6 NGKVCLVTGA-GGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGV--EARSYVCDVTSEEAVIGTVDSVVRDF 82 (262)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTS--CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 3567776665 56788887766543 35899999999988888777766654 377888898764310 01
Q ss_pred CCcCEEEEcCCCC
Q 012998 403 VKCDKVLLDAPCS 415 (451)
Q Consensus 403 ~~fD~VlvD~PCS 415 (451)
+.+|.++..+-..
T Consensus 83 g~id~lv~nAg~~ 95 (262)
T 1zem_A 83 GKIDFLFNNAGYQ 95 (262)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4689999877543
No 452
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=59.41 E-value=8.6 Score=37.74 Aligned_cols=47 Identities=9% Similarity=-0.025 Sum_probs=35.7
Q ss_pred CCCCeEEeecCC--CchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 332 QPGQSIVDCCAA--PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 332 ~~g~~VLDlcag--pG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
++|++||=.|++ .|..++++|..++ .+|+++. ++++++.+ +.+|.+.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~G--a~Vi~~~-~~~~~~~~----~~lGa~~ 211 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSG--YIPIATC-SPHNFDLA----KSRGAEE 211 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEE-CGGGHHHH----HHTTCSE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCC--CEEEEEe-CHHHHHHH----HHcCCcE
Confidence 789999999983 6777888888754 5788885 88887765 4578764
No 453
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=59.20 E-value=21 Score=32.44 Aligned_cols=80 Identities=13% Similarity=-0.007 Sum_probs=55.9
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCC--CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------C
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSG--QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------S 401 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~--~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~ 401 (451)
.+.+||=.| |+|+.+.+++..+.. +..|+.++.+...++.+.+.+...+. .+.++.+|..+.... .
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL--SPRFHQLDIDDLQSIRALRDFLRKE 79 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTC--CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCC--eeEEEECCCCCHHHHHHHHHHHHHh
Confidence 355677555 668888888876643 46899999999988888877776663 367788898764311 0
Q ss_pred CCCcCEEEEcCCCC
Q 012998 402 TVKCDKVLLDAPCS 415 (451)
Q Consensus 402 ~~~fD~VlvD~PCS 415 (451)
.+.+|.|+..+-..
T Consensus 80 ~g~id~li~~Ag~~ 93 (276)
T 1wma_A 80 YGGLDVLVNNAGIA 93 (276)
T ss_dssp HSSEEEEEECCCCC
T ss_pred cCCCCEEEECCccc
Confidence 13689999876443
No 454
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=59.19 E-value=31 Score=32.18 Aligned_cols=80 Identities=15% Similarity=0.021 Sum_probs=56.4
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~ 402 (451)
.+..||=.|++ ||.+..++..+. .+.+|+.+|.+...++.+.+.+...|. .+.++.+|..+.... ..
T Consensus 27 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (283)
T 3v8b_A 27 PSPVALITGAG-SGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGG--QAIALEADVSDELQMRNAVRDLVLKF 103 (283)
T ss_dssp CCCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTC--CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 36677777755 667777776554 345899999999999888888776664 377888998764210 02
Q ss_pred CCcCEEEEcCCCC
Q 012998 403 VKCDKVLLDAPCS 415 (451)
Q Consensus 403 ~~fD~VlvD~PCS 415 (451)
+..|.++..+--.
T Consensus 104 g~iD~lVnnAg~~ 116 (283)
T 3v8b_A 104 GHLDIVVANAGIN 116 (283)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4789999877543
No 455
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=59.01 E-value=40 Score=31.00 Aligned_cols=80 Identities=15% Similarity=0.066 Sum_probs=54.0
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHH-HHcCCCceEEEEcCcccccccc---------C
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETA-KLHQVNSVIRTIHADLRTFADN---------S 401 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~-~~~g~~~~I~~~~~Da~~~~~~---------~ 401 (451)
.|.+||=.|+ +|+.+..++..+-. +.+|++++.++..++.+.+.+ +..|. .+.++.+|..+.... .
T Consensus 20 ~~k~~lVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~ 96 (267)
T 1vl8_A 20 RGRVALVTGG-SRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV--ETMAFRCDVSNYEEVKKLLEAVKEK 96 (267)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC--CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC--eEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3567776665 57788888776543 358999999998888776666 44454 367788888764210 0
Q ss_pred CCCcCEEEEcCCCC
Q 012998 402 TVKCDKVLLDAPCS 415 (451)
Q Consensus 402 ~~~fD~VlvD~PCS 415 (451)
.+.+|.++..+-..
T Consensus 97 ~g~iD~lvnnAg~~ 110 (267)
T 1vl8_A 97 FGKLDTVVNAAGIN 110 (267)
T ss_dssp HSCCCEEEECCCCC
T ss_pred cCCCCEEEECCCcC
Confidence 14689999876543
No 456
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=58.63 E-value=4.8 Score=38.42 Aligned_cols=82 Identities=11% Similarity=-0.151 Sum_probs=51.7
Q ss_pred CCeEEeecCCCchHHHHHHHHcCCC-ceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---C-CCCcCEE
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSGQ-GLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---S-TVKCDKV 408 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~~-g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---~-~~~fD~V 408 (451)
+.+||=.| |+|+.+.++++.+... ..|++++.+........+.+....-. .+.++.+|..+.... . ...+|.|
T Consensus 5 ~~~vlVTG-atG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~~~~~~~~~~~d~v 82 (341)
T 3enk_A 5 KGTILVTG-GAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGK-TPAFHETDVSDERALARIFDAHPITAA 82 (341)
T ss_dssp SCEEEEET-TTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSC-CCEEECCCTTCHHHHHHHHHHSCCCEE
T ss_pred CcEEEEec-CCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCC-CceEEEeecCCHHHHHHHHhccCCcEE
Confidence 45777555 6788999888766443 58999998766554444444433222 367888998764321 1 1368999
Q ss_pred EEcCCCCCc
Q 012998 409 LLDAPCSGL 417 (451)
Q Consensus 409 lvD~PCSg~ 417 (451)
+..+-.+..
T Consensus 83 ih~A~~~~~ 91 (341)
T 3enk_A 83 IHFAALKAV 91 (341)
T ss_dssp EECCCCCCH
T ss_pred EECcccccc
Confidence 987654443
No 457
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=58.51 E-value=12 Score=36.72 Aligned_cols=51 Identities=14% Similarity=0.105 Sum_probs=35.7
Q ss_pred hCCC-CCCeEEeecCCC-chHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC
Q 012998 329 VDPQ-PGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN 384 (451)
Q Consensus 329 l~~~-~g~~VLDlcagp-G~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~ 384 (451)
..+. +|++||=+|+|+ |..++++|..++ .+|+++|.++.+++.+.+ .+|.+
T Consensus 182 ~~~~~~g~~VlV~GaG~vG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~~---~lGa~ 234 (366)
T 1yqd_A 182 FGLDEPGKHIGIVGLGGLGHVAVKFAKAFG--SKVTVISTSPSKKEEALK---NFGAD 234 (366)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCGGGHHHHHH---TSCCS
T ss_pred cCcCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH---hcCCc
Confidence 3567 899999998643 334555565543 589999999988876542 46765
No 458
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=58.45 E-value=37 Score=31.36 Aligned_cols=81 Identities=19% Similarity=0.133 Sum_probs=55.3
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC-CCceEEEEeC-------------CHHHHHHHHHHHHHcCCCceEEEEcCcccccc
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDI-------------NKGRLRILNETAKLHQVNSVIRTIHADLRTFA 398 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi-------------~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~ 398 (451)
.|.+||=.|++ ||.+..++..+- .+.+|+.+|. +...++...+.+...+. .+.++..|..+..
T Consensus 10 ~~k~~lVTGas-~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~ 86 (277)
T 3tsc_A 10 EGRVAFITGAA-RGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANR--RIVAAVVDTRDFD 86 (277)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTC--CEEEEECCTTCHH
T ss_pred CCCEEEEECCc-cHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC--eEEEEECCCCCHH
Confidence 46677777655 667777776554 3458999998 67888877777777664 3778888987643
Q ss_pred cc---------CCCCcCEEEEcCCCCC
Q 012998 399 DN---------STVKCDKVLLDAPCSG 416 (451)
Q Consensus 399 ~~---------~~~~fD~VlvD~PCSg 416 (451)
.. ..+..|.++..+--..
T Consensus 87 ~v~~~~~~~~~~~g~id~lvnnAg~~~ 113 (277)
T 3tsc_A 87 RLRKVVDDGVAALGRLDIIVANAGVAA 113 (277)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 11 0146899998775443
No 459
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=58.07 E-value=37 Score=31.09 Aligned_cols=79 Identities=14% Similarity=0.059 Sum_probs=53.5
Q ss_pred CCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CCC
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STV 403 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~~ 403 (451)
|.+||=.|+ +|+.+.+++..+-. +.+|+.++.++..++.+.+.+........+.++.+|..+.... ..+
T Consensus 13 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 91 (267)
T 1iy8_A 13 DRVVLITGG-GSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 91 (267)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 567777765 57788877766543 4589999999998887777766541112377888898764311 014
Q ss_pred CcCEEEEcCC
Q 012998 404 KCDKVLLDAP 413 (451)
Q Consensus 404 ~fD~VlvD~P 413 (451)
.+|.++..+-
T Consensus 92 ~id~lv~nAg 101 (267)
T 1iy8_A 92 RIDGFFNNAG 101 (267)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899998764
No 460
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=58.00 E-value=17 Score=31.99 Aligned_cols=69 Identities=12% Similarity=-0.010 Sum_probs=45.8
Q ss_pred eEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEEcCC
Q 012998 336 SIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAP 413 (451)
Q Consensus 336 ~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD~P 413 (451)
+||=.| |+|+.+.+++..+-. +..|++++.++..+..+. + . .++++.+|..+........+|.|+.-+.
T Consensus 2 kilVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~-~-~~~~~~~D~~d~~~~~~~~~d~vi~~ag 71 (224)
T 3h2s_A 2 KIAVLG-ATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL------G-A-TVATLVKEPLVLTEADLDSVDAVVDALS 71 (224)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT------C-T-TSEEEECCGGGCCHHHHTTCSEEEECCC
T ss_pred EEEEEc-CCCHHHHHHHHHHHHCCCEEEEEEeccccccccc------C-C-CceEEecccccccHhhcccCCEEEECCc
Confidence 455455 568888888876643 358999999988765431 1 2 3678889987653312246899988554
No 461
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=57.99 E-value=18 Score=34.66 Aligned_cols=50 Identities=14% Similarity=0.097 Sum_probs=37.1
Q ss_pred hCCCCCCeEEeecC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC
Q 012998 329 VDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN 384 (451)
Q Consensus 329 l~~~~g~~VLDlca--gpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~ 384 (451)
.++++|++||-.|+ |.|..+.+++... +.+|+++|.++++++.+++ +|.+
T Consensus 141 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~----~g~~ 192 (333)
T 1wly_A 141 HKVKPGDYVLIHAAAGGMGHIMVPWARHL--GATVIGTVSTEEKAETARK----LGCH 192 (333)
T ss_dssp SCCCTTCEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCS
T ss_pred hCCCCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCC
Confidence 46789999999985 4555666666654 3589999999988887754 4654
No 462
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=57.93 E-value=28 Score=32.22 Aligned_cols=81 Identities=21% Similarity=0.062 Sum_probs=56.1
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC-CCceEEEEeC-------------CHHHHHHHHHHHHHcCCCceEEEEcCcccccc
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDI-------------NKGRLRILNETAKLHQVNSVIRTIHADLRTFA 398 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi-------------~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~ 398 (451)
.|.+||=.|++ ||.+.+++..+- .+.+|+.+|. ++..++.+.+.+...|.. +.++..|..+..
T Consensus 14 ~gk~~lVTGas-~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Dv~~~~ 90 (280)
T 3pgx_A 14 QGRVAFITGAA-RGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRK--ALTRVLDVRDDA 90 (280)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCC--EEEEECCTTCHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCe--EEEEEcCCCCHH
Confidence 46677777765 667777776554 3458999998 788888888888777643 778888987643
Q ss_pred cc---------CCCCcCEEEEcCCCCC
Q 012998 399 DN---------STVKCDKVLLDAPCSG 416 (451)
Q Consensus 399 ~~---------~~~~fD~VlvD~PCSg 416 (451)
.. ..+..|.++..+--..
T Consensus 91 ~v~~~~~~~~~~~g~id~lvnnAg~~~ 117 (280)
T 3pgx_A 91 ALRELVADGMEQFGRLDVVVANAGVLS 117 (280)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 11 0147899998765433
No 463
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=57.64 E-value=10 Score=36.12 Aligned_cols=32 Identities=22% Similarity=0.197 Sum_probs=24.8
Q ss_pred eEEEEcCcccccccc-CCCCcCEEEEcCCCCCc
Q 012998 386 VIRTIHADLRTFADN-STVKCDKVLLDAPCSGL 417 (451)
Q Consensus 386 ~I~~~~~Da~~~~~~-~~~~fD~VlvD~PCSg~ 417 (451)
.++++++|..++... .+++||+|++|||.-..
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~ 53 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTL 53 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCC
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCc
Confidence 368899999885432 35789999999998544
No 464
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=57.58 E-value=19 Score=28.92 Aligned_cols=55 Identities=15% Similarity=0.123 Sum_probs=39.3
Q ss_pred CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc-cCCCCcCEEEEcCCCCC
Q 012998 358 QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD-NSTVKCDKVLLDAPCSG 416 (451)
Q Consensus 358 ~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~-~~~~~fD~VlvD~PCSg 416 (451)
..+|.-+|-++.....++..++..|+. +. ...+...... .....+|+|++|. ..+
T Consensus 4 ~~~iLivdd~~~~~~~l~~~L~~~g~~--v~-~~~~~~~a~~~l~~~~~dlvi~d~-~~~ 59 (142)
T 2qxy_A 4 TPTVMVVDESRITFLAVKNALEKDGFN--VI-WAKNEQEAFTFLRREKIDLVFVDV-FEG 59 (142)
T ss_dssp CCEEEEECSCHHHHHHHHHHHGGGTCE--EE-EESSHHHHHHHHTTSCCSEEEEEC-TTT
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhCCCE--EE-EECCHHHHHHHHhccCCCEEEEeC-CCC
Confidence 467999999999999999999998874 44 3344433221 1235799999997 544
No 465
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=57.37 E-value=32 Score=30.94 Aligned_cols=80 Identities=15% Similarity=0.114 Sum_probs=53.0
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceE-EEEcCccccccccC--------C
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVI-RTIHADLRTFADNS--------T 402 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I-~~~~~Da~~~~~~~--------~ 402 (451)
.+.+||=.|+ +|+.+.+++..+.. +.+|++++.++..++.+.+.+ +. .+ .++.+|..+..... .
T Consensus 10 ~~k~vlITGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (254)
T 2wsb_A 10 DGACAAVTGA-GSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---GA--AVAARIVADVTDAEAMTAAAAEAEAV 83 (254)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GG--GEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cc--cceeEEEEecCCHHHHHHHHHHHHhh
Confidence 3567776664 57888888776543 358999999998877665554 32 24 77888877643110 1
Q ss_pred CCcCEEEEcCCCCCcc
Q 012998 403 VKCDKVLLDAPCSGLG 418 (451)
Q Consensus 403 ~~fD~VlvD~PCSg~G 418 (451)
+.+|.|+..+-....+
T Consensus 84 ~~id~li~~Ag~~~~~ 99 (254)
T 2wsb_A 84 APVSILVNSAGIARLH 99 (254)
T ss_dssp SCCCEEEECCCCCCCB
T ss_pred CCCcEEEECCccCCCC
Confidence 4689999987654433
No 466
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=56.89 E-value=30 Score=30.97 Aligned_cols=79 Identities=14% Similarity=0.051 Sum_probs=53.7
Q ss_pred CCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHH-cCCCceEEEEcCcccccccc---------CC
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKL-HQVNSVIRTIHADLRTFADN---------ST 402 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~-~g~~~~I~~~~~Da~~~~~~---------~~ 402 (451)
+.+||=.|+ +|+.+.+++..+. .+.+|++++.++..++.+.+.+.. .+. .+.++.+|..+.... ..
T Consensus 7 ~~~vlVtGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (248)
T 2pnf_A 7 GKVSLVTGS-TRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGV--KAHGVEMNLLSEESINKAFEEIYNLV 83 (248)
T ss_dssp TCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCC--CEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCEEEEECC-CchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCC--ceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 566776555 6788888877654 345899999999988877766654 453 377888887654211 01
Q ss_pred CCcCEEEEcCCCC
Q 012998 403 VKCDKVLLDAPCS 415 (451)
Q Consensus 403 ~~fD~VlvD~PCS 415 (451)
+.+|.|+..+-..
T Consensus 84 ~~~d~vi~~Ag~~ 96 (248)
T 2pnf_A 84 DGIDILVNNAGIT 96 (248)
T ss_dssp SCCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4689999876543
No 467
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=56.86 E-value=28 Score=31.17 Aligned_cols=78 Identities=14% Similarity=0.029 Sum_probs=52.5
Q ss_pred eEEeecCCCchHHHHHHHHcCCC-ceEEEE-eCCHHHHHHHHHHHHHcCCCceEEE-EcCcccccccc---------CCC
Q 012998 336 SIVDCCAAPGGKTLYMASCLSGQ-GLVYAI-DINKGRLRILNETAKLHQVNSVIRT-IHADLRTFADN---------STV 403 (451)
Q Consensus 336 ~VLDlcagpG~kT~~la~~~~~~-g~V~Av-Di~~~rl~~l~~~~~~~g~~~~I~~-~~~Da~~~~~~---------~~~ 403 (451)
+||=.| |+|+.+.+++..+... ..|+++ +.++..++.+.+.+...+.. +.+ +.+|..+.... ..+
T Consensus 3 ~vlITG-asggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (245)
T 2ph3_A 3 KALITG-ASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSP--LVAVLGANLLEAEAATALVHQAAEVLG 79 (245)
T ss_dssp EEEETT-TTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCS--CEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred EEEEeC-CCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc--eEEEEeccCCCHHHHHHHHHHHHHhcC
Confidence 455444 5688899888776544 478888 89998888777777666643 344 77887654311 014
Q ss_pred CcCEEEEcCCCCC
Q 012998 404 KCDKVLLDAPCSG 416 (451)
Q Consensus 404 ~fD~VlvD~PCSg 416 (451)
.+|.|+..+-...
T Consensus 80 ~~d~li~~Ag~~~ 92 (245)
T 2ph3_A 80 GLDTLVNNAGITR 92 (245)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 6899998775443
No 468
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=56.55 E-value=6.4 Score=34.51 Aligned_cols=77 Identities=17% Similarity=0.113 Sum_probs=37.0
Q ss_pred eEEeecCCCch--HHH---HHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccc---ccCCCCcC
Q 012998 336 SIVDCCAAPGG--KTL---YMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA---DNSTVKCD 406 (451)
Q Consensus 336 ~VLDlcagpG~--kT~---~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~---~~~~~~fD 406 (451)
+|+=++++-|| ||+ .+|..+.. +.+|..+|.++..-.... +.. .-.+ +.++..+...+. ......||
T Consensus 2 ~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~~~~~~--~~~-~~~~-~~~~~~~~~~l~~~l~~l~~~yD 77 (206)
T 4dzz_A 2 KVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQMSLTNW--SKA-GKAA-FDVFTAASEKDVYGIRKDLADYD 77 (206)
T ss_dssp EEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH--HTT-SCCS-SEEEECCSHHHHHTHHHHTTTSS
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCCCCHHHH--Hhc-CCCC-CcEEecCcHHHHHHHHHhcCCCC
Confidence 34555544443 443 33333322 347999999865432211 111 1111 333433322211 11235699
Q ss_pred EEEEcCCCCC
Q 012998 407 KVLLDAPCSG 416 (451)
Q Consensus 407 ~VlvD~PCSg 416 (451)
.|++|.|.+-
T Consensus 78 ~viiD~~~~~ 87 (206)
T 4dzz_A 78 FAIVDGAGSL 87 (206)
T ss_dssp EEEEECCSSS
T ss_pred EEEEECCCCC
Confidence 9999998654
No 469
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=56.22 E-value=26 Score=29.21 Aligned_cols=73 Identities=12% Similarity=0.110 Sum_probs=45.8
Q ss_pred CCeEEeecCCCchHHHHHHHHcCCC-ceEEEEeCC-HHHHHHHHHHHHHcCCCceEEEEcCccccccc---cCCCCcCEE
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSGQ-GLVYAIDIN-KGRLRILNETAKLHQVNSVIRTIHADLRTFAD---NSTVKCDKV 408 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~~-g~V~AvDi~-~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~---~~~~~fD~V 408 (451)
..+|+=+| .|..+..++..+... ..|+.+|.+ +++++.+.+... .| +.++.+|+.+... ..-..+|.|
T Consensus 3 ~~~vlI~G--~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~-~~----~~~i~gd~~~~~~l~~a~i~~ad~v 75 (153)
T 1id1_A 3 KDHFIVCG--HSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-DN----ADVIPGDSNDSSVLKKAGIDRCRAI 75 (153)
T ss_dssp CSCEEEEC--CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-TT----CEEEESCTTSHHHHHHHTTTTCSEE
T ss_pred CCcEEEEC--CCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc-CC----CeEEEcCCCCHHHHHHcChhhCCEE
Confidence 34666555 477888887766433 479999998 576766654322 23 4567888765321 113568999
Q ss_pred EEcCC
Q 012998 409 LLDAP 413 (451)
Q Consensus 409 lvD~P 413 (451)
++-.+
T Consensus 76 i~~~~ 80 (153)
T 1id1_A 76 LALSD 80 (153)
T ss_dssp EECSS
T ss_pred EEecC
Confidence 88543
No 470
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=56.17 E-value=15 Score=35.74 Aligned_cols=51 Identities=12% Similarity=0.035 Sum_probs=36.3
Q ss_pred hhCCCCCCeEEeecC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCC
Q 012998 328 VVDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN 384 (451)
Q Consensus 328 ~l~~~~g~~VLDlca--gpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~ 384 (451)
..++++|++||-.|+ |.|..+.+++... +.+|+++|.++++++.++ .+|.+
T Consensus 165 ~~~~~~g~~vlV~GasggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~----~~ga~ 217 (351)
T 1yb5_A 165 SACVKAGESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEGQKIVL----QNGAH 217 (351)
T ss_dssp TSCCCTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HTTCS
T ss_pred hhCCCCcCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChhHHHHHH----HcCCC
Confidence 346789999999997 3344555566554 358999999999888653 45654
No 471
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=56.04 E-value=8.1 Score=37.50 Aligned_cols=51 Identities=16% Similarity=0.210 Sum_probs=33.1
Q ss_pred hhCCCCCCeEEeecCC--CchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 328 VVDPQPGQSIVDCCAA--PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 328 ~l~~~~g~~VLDlcag--pG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
..++++|++||=.|++ .|..++++|..++ ..+|++++ +..+.+.++ +|.+.
T Consensus 137 ~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g-~~~V~~~~-~~~~~~~~~-----~ga~~ 189 (349)
T 4a27_A 137 VANLREGMSVLVHSAGGGVGQAVAQLCSTVP-NVTVFGTA-STFKHEAIK-----DSVTH 189 (349)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHTTST-TCEEEEEE-CGGGHHHHG-----GGSSE
T ss_pred hcCCCCCCEEEEEcCCcHHHHHHHHHHHHcC-CcEEEEeC-CHHHHHHHH-----cCCcE
Confidence 3467899999999883 2444555555543 35899988 555555443 56654
No 472
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=55.88 E-value=8.8 Score=37.36 Aligned_cols=55 Identities=15% Similarity=0.083 Sum_probs=36.0
Q ss_pred hCCCCC-CeEEeecC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 329 VDPQPG-QSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 329 l~~~~g-~~VLDlca--gpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
.++++| ++||=.|| |.|..++++|..++ .+|+++..+...+...++.++.+|.+.
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~G--a~vi~~~~~~~~~~~~~~~~~~lGa~~ 219 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLLN--FNSISVIRDRPNLDEVVASLKELGATQ 219 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHHT--CEEEEEECCCTTHHHHHHHHHHHTCSE
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHCC--CEEEEEecCccccHHHHHHHHhcCCeE
Confidence 367889 99999886 34556777777754 577777655554333333445678764
No 473
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=55.67 E-value=52 Score=30.52 Aligned_cols=80 Identities=15% Similarity=0.050 Sum_probs=54.9
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHc-CCCceEEEEcCcccccccc---------C
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLH-QVNSVIRTIHADLRTFADN---------S 401 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~~-g~~~~I~~~~~Da~~~~~~---------~ 401 (451)
.|.+||=.|+ +|+.+.+++..+.. +.+|++++.++..++.+.+.+... +. .+.++.+|..+.... .
T Consensus 25 ~~k~vlITGa-sggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (302)
T 1w6u_A 25 QGKVAFITGG-GTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN--KVHAIQCDVRDPDMVQNTVSELIKV 101 (302)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSS--CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC--ceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 3567776665 57888888776543 358999999998888777666554 43 378888998764210 1
Q ss_pred CCCcCEEEEcCCCC
Q 012998 402 TVKCDKVLLDAPCS 415 (451)
Q Consensus 402 ~~~fD~VlvD~PCS 415 (451)
.+.+|.|+..+-.+
T Consensus 102 ~g~id~li~~Ag~~ 115 (302)
T 1w6u_A 102 AGHPNIVINNAAGN 115 (302)
T ss_dssp TCSCSEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 24689999877543
No 474
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=55.48 E-value=36 Score=31.32 Aligned_cols=79 Identities=19% Similarity=0.088 Sum_probs=55.2
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCC------------HHHHHHHHHHHHHcCCCceEEEEcCccccccc
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDIN------------KGRLRILNETAKLHQVNSVIRTIHADLRTFAD 399 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~------------~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~ 399 (451)
.|.+||=.|+ +|+.+.+++..+- .+.+|+.+|.+ .+.++...+.++..|. .+.++.+|..+...
T Consensus 12 ~gk~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~ 88 (278)
T 3sx2_A 12 TGKVAFITGA-ARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS--RIVARQADVRDRES 88 (278)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTC--CEEEEECCTTCHHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCC--eEEEEeCCCCCHHH
Confidence 4667777775 4677777776654 34589999987 7788887777777764 37888999876431
Q ss_pred c---------CCCCcCEEEEcCCC
Q 012998 400 N---------STVKCDKVLLDAPC 414 (451)
Q Consensus 400 ~---------~~~~fD~VlvD~PC 414 (451)
. ..+..|.++..+--
T Consensus 89 v~~~~~~~~~~~g~id~lv~nAg~ 112 (278)
T 3sx2_A 89 LSAALQAGLDELGRLDIVVANAGI 112 (278)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 1 01478999987643
No 475
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=55.37 E-value=25 Score=27.96 Aligned_cols=53 Identities=11% Similarity=0.066 Sum_probs=38.5
Q ss_pred CceEEEEeCCHHHHHHHHHHHHHcC-CCceEEEEcCcccccccc-CCCCcCEEEEcCC
Q 012998 358 QGLVYAIDINKGRLRILNETAKLHQ-VNSVIRTIHADLRTFADN-STVKCDKVLLDAP 413 (451)
Q Consensus 358 ~g~V~AvDi~~~rl~~l~~~~~~~g-~~~~I~~~~~Da~~~~~~-~~~~fD~VlvD~P 413 (451)
..+|.-+|-++.....++..++..| +. +. ...+..+.... ....+|+|++|.-
T Consensus 14 ~~~ilivdd~~~~~~~l~~~L~~~g~~~--v~-~~~~~~~a~~~l~~~~~dlvi~D~~ 68 (135)
T 3snk_A 14 RKQVALFSSDPNFKRDVATRLDALAIYD--VR-VSETDDFLKGPPADTRPGIVILDLG 68 (135)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHHTSSEE--EE-EECGGGGGGCCCTTCCCSEEEEEEE
T ss_pred CcEEEEEcCCHHHHHHHHHHHhhcCCeE--EE-EeccHHHHHHHHhccCCCEEEEeCC
Confidence 3589999999999999999999988 63 43 33444443322 2467999999954
No 476
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=55.36 E-value=17 Score=31.74 Aligned_cols=71 Identities=20% Similarity=0.140 Sum_probs=49.2
Q ss_pred eEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---CC--CCcCEEEE
Q 012998 336 SIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---ST--VKCDKVLL 410 (451)
Q Consensus 336 ~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---~~--~~fD~Vlv 410 (451)
+||=.| |+|+.+.+++..+... +|++++.++..++.+.+.+.. .++.+|..+.... .. +.+|.|+.
T Consensus 2 ~vlVtG-asg~iG~~la~~l~~~-~V~~~~r~~~~~~~~~~~~~~-------~~~~~D~~~~~~~~~~~~~~~~id~vi~ 72 (207)
T 2yut_A 2 RVLITG-ATGGLGGAFARALKGH-DLLLSGRRAGALAELAREVGA-------RALPADLADELEAKALLEEAGPLDLLVH 72 (207)
T ss_dssp EEEEET-TTSHHHHHHHHHTTTS-EEEEECSCHHHHHHHHHHHTC-------EECCCCTTSHHHHHHHHHHHCSEEEEEE
T ss_pred EEEEEc-CCcHHHHHHHHHHHhC-CEEEEECCHHHHHHHHHhccC-------cEEEeeCCCHHHHHHHHHhcCCCCEEEE
Confidence 345444 6789999999988777 999999999888766655421 5677887654311 11 36899998
Q ss_pred cCCCC
Q 012998 411 DAPCS 415 (451)
Q Consensus 411 D~PCS 415 (451)
.+--+
T Consensus 73 ~ag~~ 77 (207)
T 2yut_A 73 AVGKA 77 (207)
T ss_dssp CCCCC
T ss_pred CCCcC
Confidence 66443
No 477
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=55.31 E-value=32 Score=31.92 Aligned_cols=80 Identities=13% Similarity=0.158 Sum_probs=56.4
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc--------CCC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN--------STV 403 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~--------~~~ 403 (451)
.|.+||=.|+ +||.+..++..+- .+.+|+.+|.++..++.+.+.+...|. .+.++.+|..+.... ..+
T Consensus 32 ~gk~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~~~~~~~~~~~~g 108 (275)
T 4imr_A 32 RGRTALVTGS-SRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGG--TAQELAGDLSEAGAGTDLIERAEAIA 108 (275)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTC--CEEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC--eEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 3667776665 4677777776653 345899999999998888888877664 377888898764211 014
Q ss_pred CcCEEEEcCCCC
Q 012998 404 KCDKVLLDAPCS 415 (451)
Q Consensus 404 ~fD~VlvD~PCS 415 (451)
..|.++..+--.
T Consensus 109 ~iD~lvnnAg~~ 120 (275)
T 4imr_A 109 PVDILVINASAQ 120 (275)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 789999877533
No 478
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=55.08 E-value=28 Score=31.84 Aligned_cols=80 Identities=16% Similarity=0.191 Sum_probs=54.1
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~ 402 (451)
.|.+||=.|++ ||.+..++..+- .+.+|+.+|.++..++.+.+.+ + ..+.++..|..+.... ..
T Consensus 7 ~gk~~lVTGas-~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 7 QGKKAIVIGGT-HGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---G--PRVHALRSDIADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G--GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C--CcceEEEccCCCHHHHHHHHHHHHHHh
Confidence 46778877755 667777776554 3458999999998887766654 3 2477888898764321 12
Q ss_pred CCcCEEEEcCCCCCcc
Q 012998 403 VKCDKVLLDAPCSGLG 418 (451)
Q Consensus 403 ~~fD~VlvD~PCSg~G 418 (451)
+..|.++..+-.+..+
T Consensus 81 g~id~lv~nAg~~~~~ 96 (255)
T 4eso_A 81 GAIDLLHINAGVSELE 96 (255)
T ss_dssp SSEEEEEECCCCCCCB
T ss_pred CCCCEEEECCCCCCCC
Confidence 4689999877554433
No 479
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=54.93 E-value=17 Score=35.55 Aligned_cols=48 Identities=10% Similarity=0.115 Sum_probs=34.1
Q ss_pred CCCCCeEEeecC--CCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCc
Q 012998 331 PQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 385 (451)
Q Consensus 331 ~~~g~~VLDlca--gpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~ 385 (451)
+++|++||=.|+ |.|..++++|...+ .+|++++ ++.+++.+ +.+|.+.
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~G--a~Vi~~~-~~~~~~~~----~~lGa~~ 230 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWD--AHVTAVC-SQDASELV----RKLGADD 230 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEE-CGGGHHHH----HHTTCSE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCC--CEEEEEe-ChHHHHHH----HHcCCCE
Confidence 788999999984 34556667777653 5899998 67776654 4578753
No 480
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=54.78 E-value=24 Score=35.11 Aligned_cols=75 Identities=16% Similarity=0.085 Sum_probs=50.1
Q ss_pred eEEeecCCCchHHHHHHHHcCCCc----eEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc---cCC-CCcCE
Q 012998 336 SIVDCCAAPGGKTLYMASCLSGQG----LVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---NST-VKCDK 407 (451)
Q Consensus 336 ~VLDlcagpG~kT~~la~~~~~~g----~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~---~~~-~~fD~ 407 (451)
+|+=+|| |+.+..++..+...+ .|+.+|.+..+++.+.+.+...+-. .+.++..|+.+... ... ...|+
T Consensus 3 kVlIiGa--GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~-~~~~~~~D~~d~~~l~~~l~~~~~Dv 79 (405)
T 4ina_A 3 KVLQIGA--GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYG-EIDITTVDADSIEELVALINEVKPQI 79 (405)
T ss_dssp EEEEECC--SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCC-CCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCC-ceEEEEecCCCHHHHHHHHHhhCCCE
Confidence 6777877 678888877665444 8999999999998887777654322 25667777754321 111 13798
Q ss_pred EEEcCC
Q 012998 408 VLLDAP 413 (451)
Q Consensus 408 VlvD~P 413 (451)
|+.-+|
T Consensus 80 Vin~ag 85 (405)
T 4ina_A 80 VLNIAL 85 (405)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 887655
No 481
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=54.71 E-value=19 Score=37.17 Aligned_cols=85 Identities=14% Similarity=0.029 Sum_probs=56.0
Q ss_pred CCCCCeEEeecCCCchHHHHHHHHcCCCc--eEEEEeCCHH---HHHHHHHHHHHcCCCceEEEEcCcccccccc---C-
Q 012998 331 PQPGQSIVDCCAAPGGKTLYMASCLSGQG--LVYAIDINKG---RLRILNETAKLHQVNSVIRTIHADLRTFADN---S- 401 (451)
Q Consensus 331 ~~~g~~VLDlcagpG~kT~~la~~~~~~g--~V~AvDi~~~---rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---~- 401 (451)
..++.+||=.| |+|+.+.+++..+-..| +|+.++.+.. .++.+.+.++..|. .+.++.+|..+.... .
T Consensus 256 ~~~~~~vLITG-gtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~--~v~~~~~Dvtd~~~v~~~~~ 332 (511)
T 2z5l_A 256 WQPSGTVLITG-GMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGC--EVVHAACDVAERDALAALVT 332 (511)
T ss_dssp CCCCSEEEEET-TTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTC--EEEEEECCSSCHHHHHHHHH
T ss_pred cCCCCEEEEEC-CCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCC--EEEEEEeCCCCHHHHHHHHh
Confidence 45677787776 56889998887765444 5888888763 34555566666664 478888998764321 0
Q ss_pred CCCcCEEEEcCCCCCcc
Q 012998 402 TVKCDKVLLDAPCSGLG 418 (451)
Q Consensus 402 ~~~fD~VlvD~PCSg~G 418 (451)
.+.+|.|+..+-....+
T Consensus 333 ~~~ld~VVh~AGv~~~~ 349 (511)
T 2z5l_A 333 AYPPNAVFHTAGILDDA 349 (511)
T ss_dssp HSCCSEEEECCCCCCCB
T ss_pred cCCCcEEEECCcccCCc
Confidence 14689999876544433
No 482
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=54.39 E-value=30 Score=31.33 Aligned_cols=79 Identities=16% Similarity=0.043 Sum_probs=54.2
Q ss_pred CCeEEeecCCCchHHHHHHHHcC-CCceEEEEeC-CHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---C------C
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDI-NKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---S------T 402 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi-~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---~------~ 402 (451)
|.+||=.| |+|+.+.+++..+- .+.+|++++. ++..++.+.+.+...+. .+.++.+|..+.... . .
T Consensus 7 ~k~vlITG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (261)
T 1gee_A 7 GKVVVITG-SSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG--EAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--EEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCC--ceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56777666 45788888876554 3458999999 88888877777766553 477888898754211 0 1
Q ss_pred CCcCEEEEcCCCC
Q 012998 403 VKCDKVLLDAPCS 415 (451)
Q Consensus 403 ~~fD~VlvD~PCS 415 (451)
+.+|.|+..+-..
T Consensus 84 g~id~li~~Ag~~ 96 (261)
T 1gee_A 84 GKLDVMINNAGLE 96 (261)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689999876543
No 483
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=54.31 E-value=20 Score=32.84 Aligned_cols=83 Identities=13% Similarity=-0.006 Sum_probs=56.3
Q ss_pred CCCeEEeecCCCc-hHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------C
Q 012998 333 PGQSIVDCCAAPG-GKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------S 401 (451)
Q Consensus 333 ~g~~VLDlcagpG-~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~ 401 (451)
.|.+||=.|++.| |.+..++..+. .+.+|+.++.+....+.+.+..+..+-. .+.++.+|..+.... .
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRN-DSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSC-CCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCC-CceEEeCCCCCHHHHHHHHHHHHHH
Confidence 3678888887743 46666665543 3458999999987777777777766653 377888998764311 0
Q ss_pred CCCcCEEEEcCCCCC
Q 012998 402 TVKCDKVLLDAPCSG 416 (451)
Q Consensus 402 ~~~fD~VlvD~PCSg 416 (451)
.+.+|.++..+-...
T Consensus 85 ~g~id~li~~Ag~~~ 99 (266)
T 3oig_A 85 VGVIHGIAHCIAFAN 99 (266)
T ss_dssp HSCCCEEEECCCCCC
T ss_pred hCCeeEEEEcccccc
Confidence 146899998775544
No 484
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=54.21 E-value=49 Score=30.42 Aligned_cols=81 Identities=19% Similarity=0.057 Sum_probs=56.3
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCC------------HHHHHHHHHHHHHcCCCceEEEEcCccccccc
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDIN------------KGRLRILNETAKLHQVNSVIRTIHADLRTFAD 399 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~------------~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~ 399 (451)
.|.+||=.|++ ||.+.+++..+-. +.+|+.+|.+ ...++.+...+...|. .+.++.+|..+...
T Consensus 9 ~gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~ 85 (287)
T 3pxx_A 9 QDKVVLVTGGA-RGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR--KAYTAEVDVRDRAA 85 (287)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTS--CEEEEECCTTCHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCC--ceEEEEccCCCHHH
Confidence 36677777665 6777777765543 4589999987 7788888877777764 37888899876432
Q ss_pred c---------CCCCcCEEEEcCCCCC
Q 012998 400 N---------STVKCDKVLLDAPCSG 416 (451)
Q Consensus 400 ~---------~~~~fD~VlvD~PCSg 416 (451)
. ..+..|.++..+-...
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~ 111 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICP 111 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCc
Confidence 1 0147899998775443
No 485
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=54.13 E-value=22 Score=31.83 Aligned_cols=73 Identities=15% Similarity=0.096 Sum_probs=47.2
Q ss_pred eEEeecCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc------cCCCCcCEE
Q 012998 336 SIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD------NSTVKCDKV 408 (451)
Q Consensus 336 ~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~------~~~~~fD~V 408 (451)
+||=.|+ +||.+..++..+- .+.+|+.++.++..++.+.+.+ + ..+.++..|..+... .....+|.+
T Consensus 3 ~vlVTGa-s~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~D~~~~~~v~~~~~~~~~~~d~l 76 (230)
T 3guy_A 3 LIVITGA-SSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---S--NNVGYRARDLASHQEVEQLFEQLDSIPSTV 76 (230)
T ss_dssp CEEEEST-TSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---S--SCCCEEECCTTCHHHHHHHHHSCSSCCSEE
T ss_pred EEEEecC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---h--hccCeEeecCCCHHHHHHHHHHHhhcCCEE
Confidence 3454554 5778887776654 3458999999998887665544 2 236677888776421 123456998
Q ss_pred EEcCCC
Q 012998 409 LLDAPC 414 (451)
Q Consensus 409 lvD~PC 414 (451)
+..+--
T Consensus 77 v~~Ag~ 82 (230)
T 3guy_A 77 VHSAGS 82 (230)
T ss_dssp EECCCC
T ss_pred EEeCCc
Confidence 886643
No 486
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=53.93 E-value=52 Score=30.50 Aligned_cols=83 Identities=12% Similarity=0.058 Sum_probs=55.7
Q ss_pred CCeEEeecCCCchHHHHHHHHcCC-CceEEEEeC-CHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CC
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDI-NKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi-~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~ 402 (451)
+.+||=.|++ ||.+..++..+-. +.+|+.+|. ++..++.+.+.+....-. .+.++.+|..+.... ..
T Consensus 25 ~k~~lVTGas-~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 102 (281)
T 3v2h_A 25 TKTAVITGST-SGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSG-TVLHHPADMTKPSEIADMMAMVADRF 102 (281)
T ss_dssp TCEEEEETCS-SHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSS-CEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCC-cEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence 5677777754 6777777766543 458999998 777888777777655323 478888998764311 12
Q ss_pred CCcCEEEEcCCCCCcc
Q 012998 403 VKCDKVLLDAPCSGLG 418 (451)
Q Consensus 403 ~~fD~VlvD~PCSg~G 418 (451)
+..|.++..+--+..+
T Consensus 103 g~iD~lv~nAg~~~~~ 118 (281)
T 3v2h_A 103 GGADILVNNAGVQFVE 118 (281)
T ss_dssp SSCSEEEECCCCCCCC
T ss_pred CCCCEEEECCCCCCCC
Confidence 4789999877544433
No 487
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=53.86 E-value=49 Score=30.73 Aligned_cols=79 Identities=14% Similarity=0.056 Sum_probs=55.0
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHH-----cCCCceEEEEcCcccccccc---C--
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKL-----HQVNSVIRTIHADLRTFADN---S-- 401 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~-----~g~~~~I~~~~~Da~~~~~~---~-- 401 (451)
.|.+||=.|+ +|+.+.+++..+- .+.+|++++.+...++.+.+.+.. .+. .+.++.+|..+.... .
T Consensus 17 ~~k~vlVTGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~ 93 (303)
T 1yxm_A 17 QGQVAIVTGG-ATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQA--RVIPIQCNIRNEEEVNNLVKS 93 (303)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCC--CEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCc--cEEEEecCCCCHHHHHHHHHH
Confidence 3667887775 5788888877654 345899999999988887777765 232 478888998764311 0
Q ss_pred ----CCCcCEEEEcCCC
Q 012998 402 ----TVKCDKVLLDAPC 414 (451)
Q Consensus 402 ----~~~fD~VlvD~PC 414 (451)
.+.+|.|+..+-.
T Consensus 94 ~~~~~g~id~li~~Ag~ 110 (303)
T 1yxm_A 94 TLDTFGKINFLVNNGGG 110 (303)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 1368999987653
No 488
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=53.83 E-value=16 Score=29.59 Aligned_cols=58 Identities=19% Similarity=0.212 Sum_probs=30.7
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEEcC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDA 412 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~VlvD~ 412 (451)
+..+||= ||+.|..|..++..| ++.++..|++ +.+.......+... ...||+||+=|
T Consensus 5 ~~mkIlL-~C~aGmSTsllv~km-------------------~~~a~~~gi~--v~i~a~~~~~~~~~-~~~~DvvLLgP 61 (108)
T 3nbm_A 5 KELKVLV-LCAGSGTSAQLANAI-------------------NEGANLTEVR--VIANSGAYGAHYDI-MGVYDLIILAP 61 (108)
T ss_dssp CCEEEEE-EESSSSHHHHHHHHH-------------------HHHHHHHTCS--EEEEEEETTSCTTT-GGGCSEEEECG
T ss_pred cCceEEE-ECCCCCCHHHHHHHH-------------------HHHHHHCCCc--eEEEEcchHHHHhh-ccCCCEEEECh
Confidence 3456774 455566666676654 3445566776 44432222222211 13589999844
Q ss_pred C
Q 012998 413 P 413 (451)
Q Consensus 413 P 413 (451)
-
T Consensus 62 Q 62 (108)
T 3nbm_A 62 Q 62 (108)
T ss_dssp G
T ss_pred H
Confidence 3
No 489
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=53.71 E-value=60 Score=30.59 Aligned_cols=68 Identities=13% Similarity=0.112 Sum_probs=43.5
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCC--ceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccccCCCCcCEEEE
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQ--GLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 410 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~--g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~~~~~fD~Vlv 410 (451)
.|.+||=+|+| +-+..++..+... .+|+.++.++++.+.+.+.+...+ + +... +..++. ..+|+|+.
T Consensus 125 ~~k~vlvlGaG--g~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~--~-~~~~--~~~~l~----~~aDiIIn 193 (281)
T 3o8q_A 125 KGATILLIGAG--GAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG--E-VKAQ--AFEQLK----QSYDVIIN 193 (281)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS--C-EEEE--EGGGCC----SCEEEEEE
T ss_pred cCCEEEEECch--HHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC--C-eeEe--eHHHhc----CCCCEEEE
Confidence 47899999885 5555555444333 379999999999888877776544 1 3333 222221 45888887
Q ss_pred c
Q 012998 411 D 411 (451)
Q Consensus 411 D 411 (451)
=
T Consensus 194 a 194 (281)
T 3o8q_A 194 S 194 (281)
T ss_dssp C
T ss_pred c
Confidence 3
No 490
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=53.50 E-value=42 Score=30.71 Aligned_cols=79 Identities=13% Similarity=-0.021 Sum_probs=54.9
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCCC-ceEEEE-eCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------C
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSGQ-GLVYAI-DINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------S 401 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~~-g~V~Av-Di~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~ 401 (451)
.|.+||=.|+ +||.+.+++..+-.. .+|+.+ +.+...++.+.+.++..|. .+.++.+|..+.... .
T Consensus 3 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (258)
T 3oid_A 3 QNKCALVTGS-SRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGV--KVLVVKANVGQPAKIKEMFQQIDET 79 (258)
T ss_dssp CCCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC--CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEecC-CchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3556776665 577888887766433 467775 8999999888888877764 378888998764311 0
Q ss_pred CCCcCEEEEcCCC
Q 012998 402 TVKCDKVLLDAPC 414 (451)
Q Consensus 402 ~~~fD~VlvD~PC 414 (451)
.+..|.++..+-.
T Consensus 80 ~g~id~lv~nAg~ 92 (258)
T 3oid_A 80 FGRLDVFVNNAAS 92 (258)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 1468999987753
No 491
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=53.34 E-value=43 Score=30.73 Aligned_cols=81 Identities=16% Similarity=0.050 Sum_probs=55.5
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCC-CceEEEEeC-CHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------C
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDI-NKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------S 401 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi-~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~ 401 (451)
.|.+||=.|++ |+.+.+++..+-. +.+|+.++. ++...+.+.+.++..|.. +.++.+|..+.... .
T Consensus 28 ~~k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~D~~~~~~v~~~~~~~~~~ 104 (271)
T 4iin_A 28 TGKNVLITGAS-KGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYK--AAVIKFDAASESDFIEAIQTIVQS 104 (271)
T ss_dssp SCCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC--EEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCc--eEEEECCCCCHHHHHHHHHHHHHh
Confidence 36677766655 6677777765543 458999988 677778888888877753 77888998764210 1
Q ss_pred CCCcCEEEEcCCCCC
Q 012998 402 TVKCDKVLLDAPCSG 416 (451)
Q Consensus 402 ~~~fD~VlvD~PCSg 416 (451)
.+.+|.++..+--..
T Consensus 105 ~g~id~li~nAg~~~ 119 (271)
T 4iin_A 105 DGGLSYLVNNAGVVR 119 (271)
T ss_dssp HSSCCEEEECCCCCC
T ss_pred cCCCCEEEECCCcCC
Confidence 247899998775443
No 492
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=52.92 E-value=29 Score=27.70 Aligned_cols=55 Identities=13% Similarity=0.074 Sum_probs=40.5
Q ss_pred CceEEEEeCCHHHHHHHHHHHHH-cCCCceEEEEcCcccccccc-CC-CCcCEEEEcCCCC
Q 012998 358 QGLVYAIDINKGRLRILNETAKL-HQVNSVIRTIHADLRTFADN-ST-VKCDKVLLDAPCS 415 (451)
Q Consensus 358 ~g~V~AvDi~~~rl~~l~~~~~~-~g~~~~I~~~~~Da~~~~~~-~~-~~fD~VlvD~PCS 415 (451)
..+|.-+|-++.....++..++. .|+. +. ...+..+.... .. ..+|+|++|.-..
T Consensus 4 ~~~ilivdd~~~~~~~l~~~L~~~~~~~--v~-~~~~~~~a~~~l~~~~~~dlvi~D~~l~ 61 (140)
T 3lua_A 4 DGTVLLIDYFEYEREKTKIIFDNIGEYD--FI-EVENLKKFYSIFKDLDSITLIIMDIAFP 61 (140)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHHCCCE--EE-EECSHHHHHTTTTTCCCCSEEEECSCSS
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhccCcc--EE-EECCHHHHHHHHhcCCCCcEEEEeCCCC
Confidence 46899999999999999999999 8874 43 34455443322 24 5799999998765
No 493
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=52.85 E-value=12 Score=35.91 Aligned_cols=68 Identities=18% Similarity=0.204 Sum_probs=46.9
Q ss_pred CCeEEeecCCCchHHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc---cCCCCcCEEEE
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---NSTVKCDKVLL 410 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~---~~~~~fD~Vlv 410 (451)
..+|+=+|+ |..+..+++.+...|.|+++|.++++++ +++ .| +.++.+|+.+... ..-...|.|++
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~v~vid~~~~~~~-~~~----~~----~~~i~gd~~~~~~L~~a~i~~a~~vi~ 183 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKK-VLR----SG----ANFVHGDPTRVSDLEKANVRGARAVIV 183 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCEEEEESCGGGHHH-HHH----TT----CEEEESCTTSHHHHHHTCSTTEEEEEE
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCcEEEEeCChhhhh-HHh----CC----cEEEEeCCCCHHHHHhcChhhccEEEE
Confidence 456776665 7788888887765555999999999988 653 23 5678899876432 11356888887
Q ss_pred cC
Q 012998 411 DA 412 (451)
Q Consensus 411 D~ 412 (451)
-.
T Consensus 184 ~~ 185 (336)
T 1lnq_A 184 DL 185 (336)
T ss_dssp CC
T ss_pred cC
Confidence 44
No 494
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=52.79 E-value=52 Score=29.93 Aligned_cols=80 Identities=16% Similarity=0.082 Sum_probs=53.5
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CC
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 402 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~ 402 (451)
.|.+||=.|+ +|+.+.+++..+- .+.+|+.+|.+...++.+.+.+ +- .+.++.+|..+.... ..
T Consensus 7 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~--~~~~~~~D~~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 7 EGKSALITGS-ARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GP--AAYAVQMDVTRQDSIDAAIAATVEHA 80 (259)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CT--TEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC--CceEEEeeCCCHHHHHHHHHHHHHHc
Confidence 4667777765 5778888776654 3458999999998877665544 32 367888898764311 12
Q ss_pred CCcCEEEEcCCCCCcc
Q 012998 403 VKCDKVLLDAPCSGLG 418 (451)
Q Consensus 403 ~~fD~VlvD~PCSg~G 418 (451)
+.+|.++..+--+..+
T Consensus 81 g~id~lv~~Ag~~~~~ 96 (259)
T 4e6p_A 81 GGLDILVNNAALFDLA 96 (259)
T ss_dssp SSCCEEEECCCCCCCB
T ss_pred CCCCEEEECCCcCCCC
Confidence 4789999987654433
No 495
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=52.72 E-value=53 Score=30.24 Aligned_cols=81 Identities=15% Similarity=0.007 Sum_probs=55.6
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCC------------HHHHHHHHHHHHHcCCCceEEEEcCccccccc
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDIN------------KGRLRILNETAKLHQVNSVIRTIHADLRTFAD 399 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~------------~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~ 399 (451)
.|.+||=.|++ ||.+..++..+- .+.+|+.+|.+ ...++...+.++..|. .+.++..|..+...
T Consensus 9 ~~k~~lVTGas-~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~ 85 (281)
T 3s55_A 9 EGKTALITGGA-RGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGR--RCISAKVDVKDRAA 85 (281)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCC--eEEEEeCCCCCHHH
Confidence 46678877765 677777776654 34589999987 6777777777777764 37788899876431
Q ss_pred c---------CCCCcCEEEEcCCCCC
Q 012998 400 N---------STVKCDKVLLDAPCSG 416 (451)
Q Consensus 400 ~---------~~~~fD~VlvD~PCSg 416 (451)
. ..+..|.++..+--+.
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~ 111 (281)
T 3s55_A 86 LESFVAEAEDTLGGIDIAITNAGIST 111 (281)
T ss_dssp HHHHHHHHHHHHTCCCEEEECCCCCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 1 0147899998775443
No 496
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=52.51 E-value=21 Score=35.78 Aligned_cols=70 Identities=10% Similarity=0.080 Sum_probs=47.1
Q ss_pred CCeEEeecCCCchHHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCccccccc---cCCCCcCEEE
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---NSTVKCDKVL 409 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~---~~~~~fD~Vl 409 (451)
+++|+=+|+ |..+..+++.+.. +..|+++|.++++++.++ ..|+. ++.+|+.+... ......|.|+
T Consensus 4 ~~~viIiG~--Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~----~~g~~----vi~GDat~~~~L~~agi~~A~~vi 73 (413)
T 3l9w_A 4 GMRVIIAGF--GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR----KFGMK----VFYGDATRMDLLESAGAAKAEVLI 73 (413)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH----HTTCC----CEESCTTCHHHHHHTTTTTCSEEE
T ss_pred CCeEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----hCCCe----EEEcCCCCHHHHHhcCCCccCEEE
Confidence 456777776 5566666666543 357999999999998775 34643 57789876431 1135689988
Q ss_pred EcCC
Q 012998 410 LDAP 413 (451)
Q Consensus 410 vD~P 413 (451)
+-.|
T Consensus 74 v~~~ 77 (413)
T 3l9w_A 74 NAID 77 (413)
T ss_dssp ECCS
T ss_pred ECCC
Confidence 8444
No 497
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=52.22 E-value=47 Score=30.61 Aligned_cols=82 Identities=12% Similarity=-0.035 Sum_probs=56.3
Q ss_pred CCCeEEeecCCCchHHHHHHHHcCC-CceEEEEeC-CHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------C
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDI-NKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------S 401 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~~-~g~V~AvDi-~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~ 401 (451)
.|.+||=.|++ ||.+.+++..+-. +..|+.++. +...++.+.+.++..|. .+.++.+|..+.... .
T Consensus 27 ~~k~vlVTGas-~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~d~~~v~~~~~~~~~~ 103 (269)
T 4dmm_A 27 TDRIALVTGAS-RGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGG--EAFAVKADVSQESEVEALFAAVIER 103 (269)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCC--cEEEEECCCCCHHHHHHHHHHHHHH
Confidence 36677766654 6778777766543 457888888 78888888888877765 377888998764311 0
Q ss_pred CCCcCEEEEcCCCCCc
Q 012998 402 TVKCDKVLLDAPCSGL 417 (451)
Q Consensus 402 ~~~fD~VlvD~PCSg~ 417 (451)
.+..|.++..+-.+..
T Consensus 104 ~g~id~lv~nAg~~~~ 119 (269)
T 4dmm_A 104 WGRLDVLVNNAGITRD 119 (269)
T ss_dssp HSCCCEEEECCCCCCC
T ss_pred cCCCCEEEECCCCCCC
Confidence 1478999998754443
No 498
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=51.99 E-value=50 Score=30.53 Aligned_cols=80 Identities=23% Similarity=0.179 Sum_probs=54.6
Q ss_pred CCCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCC----------------HHHHHHHHHHHHHcCCCceEEEEcCccc
Q 012998 333 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDIN----------------KGRLRILNETAKLHQVNSVIRTIHADLR 395 (451)
Q Consensus 333 ~g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~----------------~~rl~~l~~~~~~~g~~~~I~~~~~Da~ 395 (451)
.|.+||=.|++ ||.+..++..+- .+.+|+.+|.+ .+.++.+.+.++..+. .+.++..|..
T Consensus 10 ~~k~~lVTGas-~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~ 86 (286)
T 3uve_A 10 EGKVAFVTGAA-RGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNR--RIVTAEVDVR 86 (286)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTC--CEEEEECCTT
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCC--ceEEEEcCCC
Confidence 36677777765 567777776554 34689999987 7778777777776664 3788889987
Q ss_pred ccccc---------CCCCcCEEEEcCCCC
Q 012998 396 TFADN---------STVKCDKVLLDAPCS 415 (451)
Q Consensus 396 ~~~~~---------~~~~fD~VlvD~PCS 415 (451)
+.... ..+..|.++..+-..
T Consensus 87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 115 (286)
T 3uve_A 87 DYDALKAAVDSGVEQLGRLDIIVANAGIG 115 (286)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCccc
Confidence 64311 014789999877543
No 499
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=51.96 E-value=54 Score=29.81 Aligned_cols=78 Identities=14% Similarity=0.117 Sum_probs=51.6
Q ss_pred CCeEEeecCCCchHHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc---------CCC
Q 012998 334 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STV 403 (451)
Q Consensus 334 g~~VLDlcagpG~kT~~la~~~~-~~g~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~---------~~~ 403 (451)
|.+||=.|+ +|+.+.+++..+- .+.+|++++.++..++.+.+.+....-...+.++.+|..+.... ..+
T Consensus 7 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (260)
T 2z1n_A 7 GKLAVVTAG-SSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG 85 (260)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCEEEEECC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 567776665 4778887776654 34589999999988887776665431011377888898754211 114
Q ss_pred CcCEEEEcCC
Q 012998 404 KCDKVLLDAP 413 (451)
Q Consensus 404 ~fD~VlvD~P 413 (451)
.|.++..+-
T Consensus 86 -id~lv~~Ag 94 (260)
T 2z1n_A 86 -ADILVYSTG 94 (260)
T ss_dssp -CSEEEECCC
T ss_pred -CCEEEECCC
Confidence 899998764
No 500
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=51.93 E-value=38 Score=30.31 Aligned_cols=77 Identities=16% Similarity=0.106 Sum_probs=52.6
Q ss_pred CeEEeecCCCchHHHHHHHHcCCCc--------eEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCcccccccc------
Q 012998 335 QSIVDCCAAPGGKTLYMASCLSGQG--------LVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN------ 400 (451)
Q Consensus 335 ~~VLDlcagpG~kT~~la~~~~~~g--------~V~AvDi~~~rl~~l~~~~~~~g~~~~I~~~~~Da~~~~~~------ 400 (451)
.+||=.| |+|+.+.+++..+-..| .|++++.++..++.+.+.+...+. .+.++.+|..+....
T Consensus 3 k~vlITG-asggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~ 79 (244)
T 2bd0_A 3 HILLITG-AGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGA--LTDTITADISDMADVRRLTTH 79 (244)
T ss_dssp EEEEEET-TTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTC--EEEEEECCTTSHHHHHHHHHH
T ss_pred CEEEEEC-CCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCC--eeeEEEecCCCHHHHHHHHHH
Confidence 4566555 56788888876654333 799999999988887777765553 478888998764210
Q ss_pred ---CCCCcCEEEEcCCC
Q 012998 401 ---STVKCDKVLLDAPC 414 (451)
Q Consensus 401 ---~~~~fD~VlvD~PC 414 (451)
..+.+|.|+..+--
T Consensus 80 ~~~~~g~id~li~~Ag~ 96 (244)
T 2bd0_A 80 IVERYGHIDCLVNNAGV 96 (244)
T ss_dssp HHHHTSCCSEEEECCCC
T ss_pred HHHhCCCCCEEEEcCCc
Confidence 02468999987643
Done!