Query 013000
Match_columns 451
No_of_seqs 140 out of 1668
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 20:20:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013000.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013000hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qa2_A CABE, polyketide oxygen 100.0 4.6E-42 1.6E-46 348.4 37.0 358 1-441 22-384 (499)
2 2qa1_A PGAE, polyketide oxygen 100.0 8.9E-42 3E-46 346.4 37.3 358 1-441 21-383 (500)
3 2x3n_A Probable FAD-dependent 100.0 2.6E-42 8.8E-47 342.0 28.3 359 1-434 16-387 (399)
4 3fmw_A Oxygenase; mithramycin, 100.0 2.1E-42 7.3E-47 355.4 27.1 365 1-442 59-430 (570)
5 3rp8_A Flavoprotein monooxygen 100.0 1.8E-41 6.1E-46 336.8 28.6 360 1-435 33-399 (407)
6 4hb9_A Similarities with proba 100.0 1.6E-40 5.6E-45 329.9 23.7 354 1-420 11-400 (412)
7 1pn0_A Phenol 2-monooxygenase; 100.0 2.9E-39 1E-43 337.9 31.0 344 1-408 18-426 (665)
8 1k0i_A P-hydroxybenzoate hydro 100.0 3.3E-39 1.1E-43 319.2 24.1 367 1-440 12-388 (394)
9 3ihg_A RDME; flavoenzyme, anth 100.0 6.8E-38 2.3E-42 321.7 27.2 333 1-406 15-374 (535)
10 2r0c_A REBC; flavin adenine di 100.0 4.1E-37 1.4E-41 316.0 28.7 343 1-425 36-410 (549)
11 2dkh_A 3-hydroxybenzoate hydro 100.0 8.1E-37 2.8E-41 319.0 31.3 340 1-408 42-417 (639)
12 2vou_A 2,6-dihydroxypyridine h 100.0 7.6E-37 2.6E-41 302.4 26.6 324 1-408 15-371 (397)
13 3alj_A 2-methyl-3-hydroxypyrid 100.0 2.3E-36 7.7E-41 297.2 24.9 313 1-398 21-343 (379)
14 3c96_A Flavin-containing monoo 100.0 2.4E-35 8.1E-40 293.0 28.4 326 1-399 14-366 (410)
15 2xdo_A TETX2 protein; tetracyc 100.0 9.4E-35 3.2E-39 287.5 24.5 339 1-412 36-393 (398)
16 3e1t_A Halogenase; flavoprotei 100.0 7.8E-34 2.7E-38 289.6 31.5 376 1-445 17-405 (512)
17 3oz2_A Digeranylgeranylglycero 100.0 1.5E-32 5.1E-37 271.0 32.3 329 1-406 14-351 (397)
18 3i3l_A Alkylhalidase CMLS; fla 100.0 4.7E-33 1.6E-37 286.5 29.8 340 1-408 33-386 (591)
19 3nix_A Flavoprotein/dehydrogen 100.0 6.5E-32 2.2E-36 269.1 31.4 325 1-397 15-351 (421)
20 3atr_A Conserved archaeal prot 100.0 2.3E-32 7.9E-37 274.8 24.9 324 1-407 16-357 (453)
21 3cgv_A Geranylgeranyl reductas 100.0 1.3E-31 4.5E-36 264.6 27.1 328 1-407 14-352 (397)
22 3c4a_A Probable tryptophan hyd 100.0 5.1E-33 1.7E-37 273.4 13.5 326 1-422 10-353 (381)
23 2pyx_A Tryptophan halogenase; 100.0 3.3E-28 1.1E-32 248.9 28.9 322 1-404 17-414 (526)
24 2weu_A Tryptophan 5-halogenase 100.0 1.2E-27 4.1E-32 244.2 32.8 320 1-406 12-408 (511)
25 2gmh_A Electron transfer flavo 100.0 1.3E-27 4.3E-32 246.7 27.0 333 1-407 45-427 (584)
26 2aqj_A Tryptophan halogenase, 100.0 1.2E-26 4.1E-31 238.0 29.7 317 1-404 15-398 (538)
27 2e4g_A Tryptophan halogenase; 100.0 1.6E-26 5.5E-31 237.4 30.1 319 1-405 35-430 (550)
28 3ihm_A Styrene monooxygenase A 99.9 5.5E-25 1.9E-29 219.4 19.0 362 1-440 32-409 (430)
29 2bry_A NEDD9 interacting prote 99.8 9.1E-20 3.1E-24 184.6 16.9 303 1-392 102-449 (497)
30 1yvv_A Amine oxidase, flavin-c 99.7 1.9E-15 6.5E-20 145.2 21.5 194 122-369 119-328 (336)
31 1ryi_A Glycine oxidase; flavop 99.0 2.2E-09 7.4E-14 104.7 14.6 193 102-366 159-361 (382)
32 2gag_B Heterotetrameric sarcos 99.0 1.4E-08 4.9E-13 99.6 19.3 116 103-242 170-286 (405)
33 2oln_A NIKD protein; flavoprot 98.9 1.2E-07 3.9E-12 92.9 21.2 69 103-193 149-218 (397)
34 1y56_B Sarcosine oxidase; dehy 98.9 8.2E-08 2.8E-12 93.4 19.1 69 103-193 145-215 (382)
35 2gf3_A MSOX, monomeric sarcosi 98.9 9.6E-08 3.3E-12 93.1 19.5 67 103-191 146-213 (389)
36 3nyc_A D-arginine dehydrogenas 98.9 9.9E-09 3.4E-13 99.8 11.9 70 102-193 149-219 (381)
37 3ps9_A TRNA 5-methylaminomethy 98.8 1.2E-08 4.2E-13 107.1 12.3 69 102-191 412-481 (676)
38 3kkj_A Amine oxidase, flavin-c 98.8 4.1E-07 1.4E-11 83.4 19.8 37 328-370 293-329 (336)
39 3nlc_A Uncharacterized protein 98.8 1E-08 3.6E-13 103.9 8.7 70 104-193 217-290 (549)
40 3pvc_A TRNA 5-methylaminomethy 98.8 1.3E-07 4.6E-12 99.3 16.8 68 102-190 407-476 (689)
41 2qcu_A Aerobic glycerol-3-phos 98.7 2.1E-07 7.1E-12 94.1 15.6 116 103-239 145-268 (501)
42 1rp0_A ARA6, thiazole biosynth 98.7 1.4E-07 4.7E-12 88.0 13.0 134 1-190 49-197 (284)
43 2i0z_A NAD(FAD)-utilizing dehy 98.7 1.3E-08 4.4E-13 101.5 5.3 68 106-194 133-212 (447)
44 3dme_A Conserved exported prot 98.7 9.1E-07 3.1E-11 85.2 18.3 72 102-193 145-220 (369)
45 3v76_A Flavoprotein; structura 98.7 8.3E-08 2.8E-12 94.4 10.8 68 104-193 129-207 (417)
46 3jsk_A Cypbp37 protein; octame 98.6 9.9E-08 3.4E-12 90.4 9.7 152 1-190 89-257 (344)
47 2uzz_A N-methyl-L-tryptophan o 98.6 8.1E-07 2.8E-11 85.9 16.4 61 103-185 145-205 (372)
48 3i6d_A Protoporphyrinogen oxid 98.6 1.5E-06 5.1E-11 86.8 18.2 56 108-186 236-291 (470)
49 2ywl_A Thioredoxin reductase r 98.5 7.2E-07 2.5E-11 76.9 10.9 67 104-193 53-119 (180)
50 3c4n_A Uncharacterized protein 98.5 1.6E-07 5.6E-12 92.2 7.3 71 102-194 167-248 (405)
51 3qj4_A Renalase; FAD/NAD(P)-bi 98.5 3E-06 1E-10 81.0 15.4 52 107-182 112-163 (342)
52 1qo8_A Flavocytochrome C3 fuma 98.4 5.4E-07 1.8E-11 92.4 9.5 67 104-190 247-318 (566)
53 3dje_A Fructosyl amine: oxygen 98.4 7E-07 2.4E-11 88.6 9.6 62 103-185 157-222 (438)
54 2gjc_A Thiazole biosynthetic e 98.4 1.9E-06 6.3E-11 81.2 11.4 140 1-191 75-246 (326)
55 3da1_A Glycerol-3-phosphate de 98.4 8.6E-07 3E-11 90.7 10.0 112 103-236 166-287 (561)
56 3ces_A MNMG, tRNA uridine 5-ca 98.4 2.3E-06 7.8E-11 87.7 12.1 148 1-191 38-188 (651)
57 2cul_A Glucose-inhibited divis 98.3 5.7E-07 1.9E-11 81.1 6.6 67 105-192 66-133 (232)
58 2gqf_A Hypothetical protein HI 98.3 1.3E-06 4.6E-11 85.4 9.6 62 105-184 107-168 (401)
59 3ab1_A Ferredoxin--NADP reduct 98.3 9.9E-07 3.4E-11 85.0 7.2 67 104-190 71-137 (360)
60 1y0p_A Fumarate reductase flav 98.3 9E-07 3.1E-11 90.9 6.9 64 105-188 253-321 (571)
61 3cp8_A TRNA uridine 5-carboxym 98.3 3.9E-06 1.3E-10 85.9 11.3 145 1-189 31-179 (641)
62 3lov_A Protoporphyrinogen oxid 98.2 1.6E-05 5.4E-10 79.6 14.9 53 109-185 238-290 (475)
63 4a9w_A Monooxygenase; baeyer-v 98.2 1.4E-06 4.9E-11 83.4 6.6 61 103-185 72-133 (357)
64 2zxi_A TRNA uridine 5-carboxym 98.2 6.5E-06 2.2E-10 84.0 11.6 147 1-190 37-186 (637)
65 2zbw_A Thioredoxin reductase; 98.2 2E-06 6.8E-11 81.8 6.9 67 104-191 62-128 (335)
66 3axb_A Putative oxidoreductase 98.2 2.2E-05 7.6E-10 77.9 14.6 85 102-193 176-264 (448)
67 3nks_A Protoporphyrinogen oxid 98.1 0.00011 3.8E-09 73.3 19.1 56 108-185 235-291 (477)
68 2q0l_A TRXR, thioredoxin reduc 98.1 4.3E-06 1.5E-10 78.6 8.1 63 103-187 55-117 (311)
69 1c0p_A D-amino acid oxidase; a 98.1 4.4E-05 1.5E-09 73.5 14.8 50 102-185 137-186 (363)
70 2ivd_A PPO, PPOX, protoporphyr 98.1 0.00014 4.9E-09 72.6 18.2 53 109-185 240-295 (478)
71 3nrn_A Uncharacterized protein 98.1 6.2E-05 2.1E-09 74.0 15.2 61 107-191 189-249 (421)
72 2gv8_A Monooxygenase; FMO, FAD 98.0 5.6E-06 1.9E-10 82.3 7.1 63 103-186 111-179 (447)
73 3ka7_A Oxidoreductase; structu 98.0 0.00033 1.1E-08 68.7 18.6 59 107-187 196-255 (425)
74 3gwf_A Cyclohexanone monooxyge 98.0 2.3E-05 7.9E-10 79.6 10.0 65 103-186 83-149 (540)
75 1d4d_A Flavocytochrome C fumar 97.9 4.9E-05 1.7E-09 77.9 11.7 65 105-189 253-322 (572)
76 1vdc_A NTR, NADPH dependent th 97.9 8.2E-06 2.8E-10 77.5 4.9 60 104-186 67-126 (333)
77 1pj5_A N,N-dimethylglycine oxi 97.9 7.4E-05 2.5E-09 80.1 12.5 70 102-193 146-217 (830)
78 1w4x_A Phenylacetone monooxyge 97.8 9.2E-05 3.2E-09 75.4 12.0 66 104-187 91-157 (542)
79 2q7v_A Thioredoxin reductase; 97.8 2.3E-05 7.8E-10 74.2 6.9 60 104-185 62-124 (325)
80 3k7m_X 6-hydroxy-L-nicotine ox 97.8 0.0002 6.8E-09 70.5 13.9 49 114-183 210-258 (431)
81 3lzw_A Ferredoxin--NADP reduct 97.8 3.2E-05 1.1E-09 73.1 7.5 64 104-188 64-127 (332)
82 1s3e_A Amine oxidase [flavin-c 97.8 0.0079 2.7E-07 60.6 25.1 43 123-185 227-269 (520)
83 3fbs_A Oxidoreductase; structu 97.8 5.8E-05 2E-09 70.1 8.4 62 104-186 53-114 (297)
84 3itj_A Thioredoxin reductase 1 97.7 2.7E-05 9.3E-10 73.8 5.6 60 104-185 81-143 (338)
85 3f8d_A Thioredoxin reductase ( 97.7 6.1E-05 2.1E-09 70.8 7.7 59 104-184 67-125 (323)
86 3cty_A Thioredoxin reductase; 97.7 6.2E-05 2.1E-09 70.9 7.7 59 104-185 69-127 (319)
87 3g3e_A D-amino-acid oxidase; F 97.7 0.00012 4.2E-09 69.9 9.8 51 102-185 137-187 (351)
88 1kf6_A Fumarate reductase flav 97.7 0.00013 4.5E-09 75.1 10.4 64 107-190 134-203 (602)
89 4ap3_A Steroid monooxygenase; 97.7 7.8E-05 2.7E-09 75.9 8.4 64 103-185 95-160 (549)
90 1trb_A Thioredoxin reductase; 97.7 5.7E-05 1.9E-09 71.1 6.9 59 104-185 59-117 (320)
91 4at0_A 3-ketosteroid-delta4-5a 97.7 0.00017 5.9E-09 72.8 10.7 59 108-185 203-265 (510)
92 2xve_A Flavin-containing monoo 97.7 3.9E-05 1.3E-09 76.5 5.7 66 103-187 97-169 (464)
93 1fl2_A Alkyl hydroperoxide red 97.6 0.00012 4E-09 68.6 8.3 64 104-185 53-116 (310)
94 4dgk_A Phytoene dehydrogenase; 97.6 0.00042 1.4E-08 69.6 12.4 65 107-191 221-285 (501)
95 2a87_A TRXR, TR, thioredoxin r 97.6 9.1E-05 3.1E-09 70.3 7.0 59 104-185 68-127 (335)
96 3d1c_A Flavin-containing putat 97.5 0.00016 5.5E-09 69.5 8.1 60 104-185 85-144 (369)
97 3uox_A Otemo; baeyer-villiger 97.5 0.00012 4E-09 74.5 7.4 64 104-186 84-149 (545)
98 2rgh_A Alpha-glycerophosphate 97.5 0.00082 2.8E-08 68.7 13.6 68 104-192 185-259 (571)
99 2vvm_A Monoamine oxidase N; FA 97.5 0.0005 1.7E-08 69.0 11.5 59 107-185 255-313 (495)
100 2e5v_A L-aspartate oxidase; ar 97.5 0.00033 1.1E-08 69.9 9.4 62 106-189 118-181 (472)
101 2yg5_A Putrescine oxidase; oxi 97.4 0.056 1.9E-06 53.2 24.5 50 109-183 217-267 (453)
102 1sez_A Protoporphyrinogen oxid 97.4 0.0029 9.9E-08 63.5 15.2 34 330-369 461-494 (504)
103 1chu_A Protein (L-aspartate ox 97.3 0.00045 1.5E-08 70.1 8.5 69 107-187 138-211 (540)
104 1hyu_A AHPF, alkyl hydroperoxi 97.3 0.00045 1.5E-08 69.9 8.3 64 104-185 264-327 (521)
105 2a8x_A Dihydrolipoyl dehydroge 97.3 0.00011 3.9E-09 73.1 3.8 132 1-187 13-149 (464)
106 4gut_A Lysine-specific histone 97.3 0.0018 6.1E-08 68.4 12.7 40 123-182 544-583 (776)
107 3s5w_A L-ornithine 5-monooxyge 97.3 0.00041 1.4E-08 68.9 7.5 65 103-185 123-193 (463)
108 2h88_A Succinate dehydrogenase 97.2 0.0015 5.3E-08 67.1 10.6 60 107-186 155-219 (621)
109 2v3a_A Rubredoxin reductase; a 97.2 0.00098 3.3E-08 64.5 8.6 66 107-193 187-254 (384)
110 2wdq_A Succinate dehydrogenase 97.1 0.0036 1.2E-07 64.1 12.5 61 107-186 143-208 (588)
111 4fk1_A Putative thioredoxin re 97.1 0.002 6.9E-08 60.0 9.6 58 106-183 59-116 (304)
112 2yqu_A 2-oxoglutarate dehydrog 97.0 0.0013 4.5E-08 65.2 7.7 59 107-186 208-266 (455)
113 1jnr_A Adenylylsulfate reducta 96.9 0.004 1.4E-07 64.5 11.4 61 106-186 150-220 (643)
114 1ges_A Glutathione reductase; 96.8 0.0023 7.7E-08 63.4 7.9 59 108-186 209-267 (450)
115 2eq6_A Pyruvate dehydrogenase 96.8 0.0028 9.6E-08 63.0 8.3 59 107-186 210-273 (464)
116 1v59_A Dihydrolipoamide dehydr 96.8 0.0015 5.3E-08 65.1 6.3 53 108-184 97-157 (478)
117 1q1r_A Putidaredoxin reductase 96.7 0.00096 3.3E-08 65.7 4.1 44 122-187 74-117 (431)
118 1dxl_A Dihydrolipoamide dehydr 96.7 0.0011 3.9E-08 65.9 4.5 59 109-191 98-158 (470)
119 4gde_A UDP-galactopyranose mut 96.6 0.0049 1.7E-07 61.9 8.7 54 107-183 222-275 (513)
120 2bs2_A Quinol-fumarate reducta 96.6 0.0051 1.7E-07 63.8 8.9 60 107-186 158-222 (660)
121 2r9z_A Glutathione amide reduc 96.5 0.006 2E-07 60.6 8.5 58 108-186 208-266 (463)
122 3r9u_A Thioredoxin reductase; 96.5 0.006 2.1E-07 56.7 7.8 56 104-183 59-117 (315)
123 1ojt_A Surface protein; redox- 96.3 0.0025 8.5E-08 63.7 4.3 26 1-30 16-41 (482)
124 1ebd_A E3BD, dihydrolipoamide 96.2 0.0025 8.5E-08 63.2 3.5 54 109-186 93-147 (455)
125 1b37_A Protein (polyamine oxid 96.2 0.05 1.7E-06 53.9 13.0 58 107-184 206-270 (472)
126 3l8k_A Dihydrolipoyl dehydroge 96.1 0.012 4E-07 58.5 8.2 49 111-183 93-143 (466)
127 3gyx_A Adenylylsulfate reducta 96.1 0.0085 2.9E-07 62.1 7.3 64 104-186 163-235 (662)
128 3o0h_A Glutathione reductase; 96.1 0.012 4.2E-07 58.7 8.2 59 107-186 232-290 (484)
129 3sx6_A Sulfide-quinone reducta 95.9 0.017 5.8E-07 56.8 8.2 44 328-371 296-346 (437)
130 3oc4_A Oxidoreductase, pyridin 95.8 0.006 2E-07 60.4 4.4 42 123-184 73-115 (452)
131 3iwa_A FAD-dependent pyridine 95.8 0.016 5.6E-07 57.5 7.4 38 329-366 286-328 (472)
132 3h28_A Sulfide-quinone reducta 95.7 0.016 5.4E-07 56.9 7.1 44 328-371 285-335 (430)
133 3ef6_A Toluene 1,2-dioxygenase 95.7 0.036 1.2E-06 53.9 9.6 67 107-194 185-253 (410)
134 3lxd_A FAD-dependent pyridine 95.7 0.053 1.8E-06 52.8 10.4 66 107-193 194-262 (415)
135 4a5l_A Thioredoxin reductase; 95.6 0.019 6.6E-07 53.3 7.0 59 104-184 63-121 (314)
136 1nhp_A NADH peroxidase; oxidor 95.6 0.045 1.5E-06 53.8 9.9 58 107-186 191-248 (447)
137 3cgb_A Pyridine nucleotide-dis 95.6 0.028 9.4E-07 56.0 8.3 38 329-366 310-352 (480)
138 2hqm_A GR, grase, glutathione 95.5 0.041 1.4E-06 54.7 9.1 59 107-186 226-287 (479)
139 1ebd_A E3BD, dihydrolipoamide 95.5 0.024 8.1E-07 56.0 7.3 59 107-186 211-272 (455)
140 1zmd_A Dihydrolipoyl dehydroge 95.4 0.024 8.2E-07 56.3 7.1 55 109-187 99-155 (474)
141 3h8l_A NADH oxidase; membrane 95.4 0.0071 2.4E-07 58.9 3.2 39 329-370 299-337 (409)
142 3fg2_P Putative rubredoxin red 95.4 0.083 2.9E-06 51.1 10.7 68 107-194 184-253 (404)
143 3klj_A NAD(FAD)-dependent dehy 95.3 0.0069 2.4E-07 58.6 2.7 39 122-182 76-114 (385)
144 1ojt_A Surface protein; redox- 95.3 0.024 8.3E-07 56.4 6.7 59 107-186 226-288 (482)
145 3lxd_A FAD-dependent pyridine 95.3 0.0097 3.3E-07 58.1 3.6 40 122-183 79-118 (415)
146 2qae_A Lipoamide, dihydrolipoy 95.3 0.056 1.9E-06 53.5 9.2 59 107-186 215-278 (468)
147 2qae_A Lipoamide, dihydrolipoy 95.3 0.02 7E-07 56.7 6.0 53 109-185 95-149 (468)
148 1mo9_A ORF3; nucleotide bindin 95.2 0.042 1.4E-06 55.3 8.3 67 107-193 255-328 (523)
149 1v59_A Dihydrolipoamide dehydr 95.2 0.039 1.3E-06 54.8 7.9 61 107-186 224-289 (478)
150 1fec_A Trypanothione reductase 95.2 0.085 2.9E-06 52.6 10.2 60 107-186 231-290 (490)
151 2gqw_A Ferredoxin reductase; f 95.1 0.034 1.2E-06 54.1 6.9 38 329-366 265-307 (408)
152 1dxl_A Dihydrolipoamide dehydr 95.1 0.036 1.2E-06 55.0 7.2 59 107-186 218-281 (470)
153 4gcm_A TRXR, thioredoxin reduc 95.1 0.068 2.3E-06 49.6 8.7 37 329-369 270-306 (312)
154 3hyw_A Sulfide-quinone reducta 95.0 0.038 1.3E-06 54.1 7.0 39 122-183 70-108 (430)
155 3kd9_A Coenzyme A disulfide re 95.0 0.025 8.5E-07 55.8 5.7 38 329-366 272-314 (449)
156 1xhc_A NADH oxidase /nitrite r 95.0 0.046 1.6E-06 52.3 7.3 39 122-183 74-112 (367)
157 3ef6_A Toluene 1,2-dioxygenase 94.9 0.041 1.4E-06 53.5 6.7 40 122-183 71-110 (410)
158 1zmd_A Dihydrolipoyl dehydroge 94.6 0.13 4.3E-06 51.0 9.7 59 107-186 220-284 (474)
159 2cdu_A NADPH oxidase; flavoenz 94.5 0.24 8.3E-06 48.6 11.4 59 107-186 191-249 (452)
160 3fg2_P Putative rubredoxin red 94.3 0.017 5.7E-07 56.2 2.5 38 329-366 267-309 (404)
161 2cdu_A NADPH oxidase; flavoenz 94.3 0.034 1.2E-06 54.9 4.8 38 329-366 274-316 (452)
162 2bc0_A NADH oxidase; flavoprot 94.3 0.066 2.2E-06 53.4 6.9 38 329-366 318-360 (490)
163 2yqu_A 2-oxoglutarate dehydrog 94.3 0.066 2.3E-06 52.8 6.8 26 1-30 11-36 (455)
164 3ic9_A Dihydrolipoamide dehydr 94.3 0.18 6E-06 50.3 10.0 56 108-185 216-275 (492)
165 1xhc_A NADH oxidase /nitrite r 94.2 0.086 3E-06 50.4 7.3 60 108-193 184-245 (367)
166 1lvl_A Dihydrolipoamide dehydr 94.2 0.071 2.4E-06 52.6 6.8 56 108-186 213-270 (458)
167 1nhp_A NADH peroxidase; oxidor 94.1 0.016 5.4E-07 57.2 1.9 38 329-366 273-315 (447)
168 3vrd_B FCCB subunit, flavocyto 94.1 0.097 3.3E-06 50.5 7.5 40 329-371 286-326 (401)
169 3ics_A Coenzyme A-disulfide re 94.1 0.015 5.2E-07 59.5 1.8 38 329-366 310-352 (588)
170 1trb_A Thioredoxin reductase; 94.0 0.3 1E-05 45.1 10.5 59 107-185 184-248 (320)
171 3urh_A Dihydrolipoyl dehydroge 94.0 0.13 4.4E-06 51.3 8.3 58 107-185 239-301 (491)
172 3g5s_A Methylenetetrahydrofola 93.9 0.097 3.3E-06 50.2 6.7 106 1-134 11-124 (443)
173 3lad_A Dihydrolipoamide dehydr 93.9 0.16 5.4E-06 50.4 8.7 59 107-186 221-282 (476)
174 3ntd_A FAD-dependent pyridine 93.8 0.21 7.3E-06 50.6 9.7 85 107-193 192-278 (565)
175 1y56_A Hypothetical protein PH 93.7 0.094 3.2E-06 52.3 6.6 35 328-368 342-376 (493)
176 1zk7_A HGII, reductase, mercur 93.6 0.21 7.1E-06 49.3 9.0 58 107-186 216-273 (467)
177 3cgb_A Pyridine nucleotide-dis 93.5 0.16 5.6E-06 50.3 8.1 57 107-185 227-283 (480)
178 2bc0_A NADH oxidase; flavoprot 93.4 0.41 1.4E-05 47.6 10.7 57 107-185 236-292 (490)
179 1xdi_A RV3303C-LPDA; reductase 93.4 0.11 3.7E-06 51.9 6.4 59 109-185 97-157 (499)
180 2gqw_A Ferredoxin reductase; f 93.2 0.4 1.4E-05 46.4 10.1 62 107-193 187-250 (408)
181 3ntd_A FAD-dependent pyridine 93.1 0.086 2.9E-06 53.5 5.4 38 329-366 295-337 (565)
182 1m6i_A Programmed cell death p 93.1 0.073 2.5E-06 53.1 4.6 41 122-184 104-144 (493)
183 3fpz_A Thiazole biosynthetic e 93.0 0.095 3.2E-06 49.1 5.2 41 329-369 283-325 (326)
184 2hqm_A GR, grase, glutathione 93.0 0.13 4.4E-06 51.1 6.3 52 109-184 107-160 (479)
185 1xdi_A RV3303C-LPDA; reductase 92.7 0.17 5.9E-06 50.4 6.8 58 108-186 224-281 (499)
186 3urh_A Dihydrolipoyl dehydroge 92.6 0.15 5.2E-06 50.7 6.3 26 1-30 35-60 (491)
187 1m6i_A Programmed cell death p 92.6 0.27 9.4E-06 48.9 8.1 66 107-193 226-293 (493)
188 3o0h_A Glutathione reductase; 92.6 0.24 8.3E-06 49.1 7.7 23 1-27 36-58 (484)
189 3iwa_A FAD-dependent pyridine 92.6 0.23 7.8E-06 49.1 7.5 67 107-194 202-270 (472)
190 1zk7_A HGII, reductase, mercur 92.5 0.11 3.8E-06 51.3 5.1 24 1-28 14-37 (467)
191 3ics_A Coenzyme A-disulfide re 92.0 0.41 1.4E-05 48.8 8.7 64 107-193 228-293 (588)
192 2eq6_A Pyruvate dehydrogenase 91.7 0.074 2.5E-06 52.6 2.6 24 1-28 16-39 (464)
193 2wpf_A Trypanothione reductase 91.6 0.4 1.4E-05 47.7 8.0 60 107-186 235-294 (495)
194 4dna_A Probable glutathione re 91.6 0.29 1E-05 48.2 6.8 23 1-27 15-37 (463)
195 3itj_A Thioredoxin reductase 1 91.4 0.51 1.8E-05 43.8 8.1 37 330-370 300-336 (338)
196 3lad_A Dihydrolipoamide dehydr 91.3 0.049 1.7E-06 54.0 0.9 26 1-30 13-38 (476)
197 2r9z_A Glutathione amide reduc 91.2 0.35 1.2E-05 47.7 7.0 24 1-28 14-37 (463)
198 3p1w_A Rabgdi protein; GDI RAB 91.2 0.4 1.4E-05 47.3 7.3 58 107-183 256-313 (475)
199 1onf_A GR, grase, glutathione 91.2 0.51 1.7E-05 47.0 8.3 60 107-186 217-277 (500)
200 1mo9_A ORF3; nucleotide bindin 91.0 0.3 1E-05 49.0 6.3 26 1-30 53-78 (523)
201 3oc4_A Oxidoreductase, pyridin 90.8 0.58 2E-05 45.9 8.1 57 107-185 189-245 (452)
202 2z3y_A Lysine-specific histone 90.8 3.9 0.00013 42.2 14.6 37 330-369 623-659 (662)
203 2q0l_A TRXR, thioredoxin reduc 90.6 0.98 3.4E-05 41.4 9.1 36 330-369 274-309 (311)
204 3qfa_A Thioredoxin reductase 1 90.5 0.38 1.3E-05 48.2 6.6 24 1-28 42-65 (519)
205 4dgk_A Phytoene dehydrogenase; 90.2 0.085 2.9E-06 52.6 1.5 38 330-372 458-495 (501)
206 3dk9_A Grase, GR, glutathione 90.0 0.97 3.3E-05 44.6 9.0 59 107-185 228-294 (478)
207 3ab1_A Ferredoxin--NADP reduct 90.0 0.85 2.9E-05 42.9 8.3 56 109-185 204-264 (360)
208 1ges_A Glutathione reductase; 89.5 1.1 3.7E-05 43.9 8.8 24 1-28 14-37 (450)
209 3dk9_A Grase, GR, glutathione 89.4 0.11 3.6E-06 51.7 1.4 24 1-28 30-53 (478)
210 3dgz_A Thioredoxin reductase 2 89.3 0.44 1.5E-05 47.3 5.8 24 1-28 16-39 (488)
211 2q7v_A Thioredoxin reductase; 89.2 2 6.9E-05 39.6 10.1 38 330-371 277-314 (325)
212 1fec_A Trypanothione reductase 89.2 0.54 1.8E-05 46.7 6.4 33 329-366 318-350 (490)
213 1d5t_A Guanine nucleotide diss 88.8 0.26 8.9E-06 48.2 3.7 58 107-185 234-291 (433)
214 3dgh_A TRXR-1, thioredoxin red 88.7 0.47 1.6E-05 47.0 5.5 26 158-183 135-161 (483)
215 2gag_A Heterotetrameric sarcos 88.5 0.87 3E-05 49.3 7.9 35 329-369 410-444 (965)
216 2v3a_A Rubredoxin reductase; a 88.5 0.27 9.3E-06 47.1 3.6 40 122-184 74-113 (384)
217 4eqs_A Coenzyme A disulfide re 88.0 1.3 4.3E-05 43.3 8.1 38 329-366 268-310 (437)
218 4dna_A Probable glutathione re 87.7 1.1 3.7E-05 44.0 7.4 58 107-185 211-269 (463)
219 3kd9_A Coenzyme A disulfide re 87.6 2 6.8E-05 41.9 9.3 64 107-193 190-255 (449)
220 3r9u_A Thioredoxin reductase; 87.4 1.9 6.4E-05 39.4 8.5 36 330-369 277-312 (315)
221 2a8x_A Dihydrolipoyl dehydroge 87.2 1 3.5E-05 44.3 6.9 58 107-185 212-272 (464)
222 1q1r_A Putidaredoxin reductase 87.1 1.2 3.9E-05 43.4 7.1 69 107-193 191-261 (431)
223 3cty_A Thioredoxin reductase; 87.0 1.9 6.6E-05 39.6 8.4 36 330-369 281-316 (319)
224 2bcg_G Secretory pathway GDP d 86.9 0.64 2.2E-05 45.6 5.2 57 107-185 242-301 (453)
225 1fl2_A Alkyl hydroperoxide red 86.7 2.2 7.5E-05 39.0 8.5 37 330-370 270-306 (310)
226 3k30_A Histamine dehydrogenase 86.6 1.3 4.3E-05 46.1 7.5 51 110-183 570-623 (690)
227 2bcg_G Secretory pathway GDP d 85.2 0.29 9.8E-06 48.1 1.7 27 1-31 21-47 (453)
228 1vdc_A NTR, NADPH dependent th 85.0 3.4 0.00012 38.1 9.1 38 330-371 288-325 (333)
229 3h8l_A NADH oxidase; membrane 84.9 1.4 4.7E-05 42.4 6.4 54 107-185 218-271 (409)
230 1rsg_A FMS1 protein; FAD bindi 84.6 1.9 6.5E-05 42.9 7.5 43 123-184 215-257 (516)
231 3dgh_A TRXR-1, thioredoxin red 84.3 1.6 5.3E-05 43.2 6.6 59 107-185 227-290 (483)
232 3s5w_A L-ornithine 5-monooxyge 82.9 2.8 9.4E-05 41.0 7.7 44 121-184 329-377 (463)
233 2e1m_A L-glutamate oxidase; L- 82.8 0.51 1.7E-05 45.1 2.2 26 1-30 54-80 (376)
234 2jae_A L-amino acid oxidase; o 82.0 0.53 1.8E-05 46.6 2.1 54 107-183 239-295 (489)
235 3d1c_A Flavin-containing putat 82.0 2.5 8.6E-05 39.6 6.9 55 111-185 218-273 (369)
236 1vg0_A RAB proteins geranylger 81.6 3.1 0.0001 42.6 7.6 56 106-181 377-434 (650)
237 2b9w_A Putative aminooxidase; 81.6 0.5 1.7E-05 45.7 1.7 41 123-184 218-258 (424)
238 4b1b_A TRXR, thioredoxin reduc 81.0 2.8 9.7E-05 42.0 7.0 59 107-186 263-321 (542)
239 2zbw_A Thioredoxin reductase; 80.8 3.6 0.00012 37.9 7.4 58 107-185 191-253 (335)
240 1rsg_A FMS1 protein; FAD bindi 80.6 0.55 1.9E-05 46.9 1.7 38 329-369 471-508 (516)
241 2a87_A TRXR, TR, thioredoxin r 80.1 5.3 0.00018 36.9 8.3 36 330-369 281-316 (335)
242 4b1b_A TRXR, thioredoxin reduc 79.6 7.1 0.00024 39.1 9.4 25 1-29 52-76 (542)
243 2wpf_A Trypanothione reductase 79.5 1.5 5.3E-05 43.4 4.5 33 329-366 322-354 (495)
244 2jae_A L-amino acid oxidase; o 79.4 2.5 8.6E-05 41.6 6.0 37 329-369 450-486 (489)
245 1i8t_A UDP-galactopyranose mut 78.8 0.78 2.7E-05 43.6 2.0 26 1-30 11-36 (367)
246 1v0j_A UDP-galactopyranose mut 77.9 0.63 2.1E-05 44.8 1.1 26 1-30 17-43 (399)
247 3hdq_A UDP-galactopyranose mut 77.3 0.85 2.9E-05 43.9 1.8 26 1-30 39-64 (397)
248 1y56_A Hypothetical protein PH 77.2 1.9 6.5E-05 42.7 4.4 58 115-193 265-324 (493)
249 2bi7_A UDP-galactopyranose mut 77.0 1.1 3.7E-05 42.9 2.5 27 1-31 13-39 (384)
250 3vrd_B FCCB subunit, flavocyto 76.3 1.6 5.6E-05 41.7 3.5 55 108-183 199-257 (401)
251 3f8d_A Thioredoxin reductase ( 75.5 5 0.00017 36.5 6.6 39 330-370 280-318 (323)
252 4g6h_A Rotenone-insensitive NA 75.2 4.1 0.00014 40.4 6.2 56 107-183 272-331 (502)
253 3dgz_A Thioredoxin reductase 2 75.0 4.8 0.00017 39.6 6.7 59 107-185 225-288 (488)
254 2vdc_G Glutamate synthase [NAD 74.4 0.9 3.1E-05 44.6 1.1 36 329-369 409-444 (456)
255 4eqs_A Coenzyme A disulfide re 72.8 3 0.0001 40.6 4.4 52 107-183 188-239 (437)
256 1d5t_A Guanine nucleotide diss 72.5 1.3 4.5E-05 43.1 1.8 27 1-31 16-42 (433)
257 2iid_A L-amino-acid oxidase; f 72.2 1.2 4.1E-05 44.1 1.4 38 329-370 449-486 (498)
258 3ic9_A Dihydrolipoamide dehydr 70.4 1.6 5.6E-05 43.2 1.9 33 329-366 305-337 (492)
259 2iid_A L-amino-acid oxidase; f 70.4 7.4 0.00025 38.2 6.8 53 107-183 241-297 (498)
260 3fbs_A Oxidoreductase; structu 69.2 7.8 0.00027 34.7 6.2 50 109-183 176-225 (297)
261 3p1w_A Rabgdi protein; GDI RAB 69.1 1.7 5.9E-05 42.7 1.8 27 1-31 30-56 (475)
262 4dsg_A UDP-galactopyranose mut 68.5 1.7 5.7E-05 43.0 1.5 56 107-187 216-273 (484)
263 2z3y_A Lysine-specific histone 68.4 2 6.8E-05 44.4 2.1 40 123-182 411-456 (662)
264 2xag_A Lysine-specific histone 67.9 2 7E-05 45.6 2.1 37 330-369 794-830 (852)
265 3hyw_A Sulfide-quinone reducta 67.7 8.9 0.0003 37.0 6.6 53 108-183 201-255 (430)
266 3lzw_A Ferredoxin--NADP reduct 66.9 6 0.00021 36.2 5.0 40 330-371 278-317 (332)
267 3pl8_A Pyranose 2-oxidase; sub 66.4 2.4 8.1E-05 43.5 2.2 26 1-30 56-81 (623)
268 4b63_A L-ornithine N5 monooxyg 66.3 8.7 0.0003 38.0 6.3 67 103-182 141-212 (501)
269 3k30_A Histamine dehydrogenase 66.3 1.9 6.4E-05 44.8 1.4 26 1-30 401-426 (690)
270 3l8k_A Dihydrolipoyl dehydroge 65.4 9.8 0.00033 37.1 6.4 55 108-186 215-274 (466)
271 2b9w_A Putative aminooxidase; 64.2 9.2 0.00031 36.6 5.9 26 1-30 16-42 (424)
272 1o94_A Tmadh, trimethylamine d 63.9 2.7 9.4E-05 43.9 2.1 26 1-30 399-424 (729)
273 3h28_A Sulfide-quinone reducta 63.0 8.2 0.00028 37.2 5.3 53 109-184 202-256 (430)
274 1b37_A Protein (polyamine oxid 62.4 2.8 9.5E-05 41.1 1.8 38 330-370 423-460 (472)
275 1onf_A GR, grase, glutathione 61.0 2.7 9.3E-05 41.6 1.4 24 1-28 12-35 (500)
276 1ps9_A 2,4-dienoyl-COA reducta 60.4 3.8 0.00013 42.3 2.5 26 1-30 383-408 (671)
277 2xag_A Lysine-specific histone 57.3 8.5 0.00029 40.9 4.5 40 123-182 582-627 (852)
278 1kdg_A CDH, cellobiose dehydro 56.6 4.1 0.00014 40.9 1.8 57 108-183 196-260 (546)
279 1ps9_A 2,4-dienoyl-COA reducta 55.8 14 0.00048 38.0 5.8 50 111-184 577-628 (671)
280 3fpz_A Thiazole biosynthetic e 55.6 4.3 0.00015 37.5 1.7 29 1-31 75-103 (326)
281 3gwf_A Cyclohexanone monooxyge 55.4 15 0.00052 36.7 5.8 42 120-185 342-385 (540)
282 3t37_A Probable dehydrogenase; 55.2 6.2 0.00021 39.2 2.9 59 107-182 210-269 (526)
283 3fim_B ARYL-alcohol oxidase; A 53.8 7.6 0.00026 39.1 3.3 27 1-30 12-38 (566)
284 1gte_A Dihydropyrimidine dehyd 53.6 4.6 0.00016 44.0 1.7 26 1-30 197-223 (1025)
285 3sx6_A Sulfide-quinone reducta 53.3 19 0.00066 34.6 6.1 51 109-182 210-267 (437)
286 1lvl_A Dihydrolipoamide dehydr 52.7 3.8 0.00013 40.0 0.9 23 1-27 15-37 (458)
287 3ayj_A Pro-enzyme of L-phenyla 50.5 3.9 0.00013 42.4 0.5 38 329-370 644-681 (721)
288 2x8g_A Thioredoxin glutathione 50.2 5 0.00017 40.7 1.3 23 1-27 117-139 (598)
289 3qvp_A Glucose oxidase; oxidor 47.4 9.8 0.00033 38.5 2.9 24 2-28 30-53 (583)
290 1cjc_A Protein (adrenodoxin re 46.5 6.5 0.00022 38.4 1.4 36 330-370 360-396 (460)
291 3qfa_A Thioredoxin reductase 1 45.8 36 0.0012 33.6 6.8 61 107-184 250-315 (519)
292 1ju2_A HydroxynitrIle lyase; f 45.1 11 0.00036 37.7 2.7 25 1-30 36-60 (536)
293 4g6h_A Rotenone-insensitive NA 44.4 9.4 0.00032 37.8 2.2 36 329-367 364-399 (502)
294 1hyu_A AHPF, alkyl hydroperoxi 44.4 34 0.0011 33.9 6.3 36 330-369 481-516 (521)
295 1lqt_A FPRA; NADP+ derivative, 44.2 20 0.00067 34.9 4.5 36 330-369 352-387 (456)
296 3uox_A Otemo; baeyer-villiger 43.9 31 0.001 34.4 5.9 22 163-185 371-392 (545)
297 2x8g_A Thioredoxin glutathione 42.3 56 0.0019 32.8 7.7 68 107-186 326-397 (598)
298 1n4w_A CHOD, cholesterol oxida 41.0 9.1 0.00031 37.9 1.5 56 111-183 225-287 (504)
299 3q9t_A Choline dehydrogenase a 40.9 15 0.00051 37.1 3.0 25 2-29 17-41 (577)
300 1kdg_A CDH, cellobiose dehydro 40.0 41 0.0014 33.4 6.2 26 1-30 17-42 (546)
301 1gpe_A Protein (glucose oxidas 39.4 13 0.00044 37.7 2.3 27 1-30 34-60 (587)
302 1n4w_A CHOD, cholesterol oxida 39.1 16 0.00054 36.1 2.9 25 1-29 15-39 (504)
303 1cjc_A Protein (adrenodoxin re 38.7 32 0.0011 33.5 5.0 26 1-30 16-43 (460)
304 4dsg_A UDP-galactopyranose mut 38.4 45 0.0015 32.6 6.1 26 1-30 19-45 (484)
305 2jbv_A Choline oxidase; alcoho 38.1 15 0.00052 36.7 2.6 59 108-185 209-275 (546)
306 1lqt_A FPRA; NADP+ derivative, 36.2 11 0.00039 36.7 1.3 30 1-30 13-45 (456)
307 1coy_A Cholesterol oxidase; ox 36.1 12 0.00042 36.9 1.6 59 106-183 225-292 (507)
308 1coy_A Cholesterol oxidase; ox 34.9 21 0.00071 35.3 3.0 25 1-29 21-45 (507)
309 4ap3_A Steroid monooxygenase; 33.9 49 0.0017 33.0 5.6 26 1-30 31-56 (549)
310 2jbv_A Choline oxidase; alcoho 32.3 48 0.0016 33.0 5.2 27 1-30 23-49 (546)
311 3lk7_A UDP-N-acetylmuramoylala 32.1 33 0.0011 33.3 3.8 24 1-28 19-42 (451)
312 1o94_A Tmadh, trimethylamine d 30.4 40 0.0014 34.9 4.4 25 111-136 575-599 (729)
313 3fwz_A Inner membrane protein 29.5 21 0.0007 28.1 1.6 24 2-29 18-41 (140)
314 3llv_A Exopolyphosphatase-rela 28.6 22 0.00074 27.8 1.6 24 2-29 17-40 (141)
315 3ayj_A Pro-enzyme of L-phenyla 27.9 33 0.0011 35.5 3.1 60 107-181 347-411 (721)
316 2g1u_A Hypothetical protein TM 24.8 36 0.0012 27.1 2.3 25 2-30 30-54 (155)
317 2ywl_A Thioredoxin reductase r 24.5 73 0.0025 25.7 4.3 38 329-370 135-172 (180)
318 1w4x_A Phenylacetone monooxyge 24.4 1.1E+02 0.0039 30.1 6.4 26 1-30 26-51 (542)
319 4a7p_A UDP-glucose dehydrogena 23.5 42 0.0014 32.5 2.8 25 2-30 19-43 (446)
320 2gag_A Heterotetrameric sarcos 23.0 70 0.0024 34.4 4.7 26 1-30 138-163 (965)
321 3nk4_C ZONA pellucida 3; ferti 22.2 46 0.0016 17.6 1.5 11 168-178 7-17 (30)
322 1vg0_A RAB proteins geranylger 21.8 30 0.001 35.3 1.5 25 2-30 19-43 (650)
323 3ojo_A CAP5O; rossmann fold, c 21.4 38 0.0013 32.6 2.0 25 2-30 22-46 (431)
324 1lss_A TRK system potassium up 21.2 52 0.0018 25.2 2.5 24 2-29 15-38 (140)
325 2xve_A Flavin-containing monoo 21.1 84 0.0029 30.4 4.5 26 1-30 12-43 (464)
326 3pl8_A Pyranose 2-oxidase; sub 20.1 53 0.0018 33.3 2.9 53 121-190 273-330 (623)
No 1
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=100.00 E-value=4.6e-42 Score=348.45 Aligned_cols=358 Identities=19% Similarity=0.223 Sum_probs=274.8
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHHHHHHCCCchhhhhhhcccccEEEEE
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVW 80 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~~~~~~~~~~~~~~~~~~ 80 (451)
|+||++|+.|++ +|++|+||||.+.+. ..++++.++++++++|+++|+++++... . ...... +
T Consensus 22 paGl~~A~~La~----~G~~v~vlE~~~~~~----------~~~r~~~l~~~~~~~l~~lGl~~~~~~~-~-~~~~~~-~ 84 (499)
T 2qa2_A 22 PAGLMLAGELRL----GGVDVMVLEQLPQRT----------GESRGLGFTARTMEVFDQRGILPAFGPV-E-TSTQGH-F 84 (499)
T ss_dssp HHHHHHHHHHHH----TTCCEEEEESCSSCC----------CCCCSEEECHHHHHHHHHTTCGGGGCSC-C-EESEEE-E
T ss_pred HHHHHHHHHHHH----CCCCEEEEECCCCCC----------CCCceeEECHHHHHHHHHCCCHHHHHhc-c-ccccce-e
Confidence 689999999999 499999999998873 3455999999999999999999998765 2 222221 1
Q ss_pred eCCCcceeEeecCCCC-CccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCC
Q 013000 81 DYTGLGYTKYNARDVN-KEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGH 159 (451)
Q Consensus 81 ~~~~~~~~~~~~~~~~-~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (451)
. + . .++..... ..+.++.++|..|+++|.+.+.+.+ ++|+++++|++++. +++
T Consensus 85 ~--~-~--~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~g-v~v~~~~~v~~i~~--------------------~~~ 138 (499)
T 2qa2_A 85 G--G-R--PVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRG-AELLRGHTVRALTD--------------------EGD 138 (499)
T ss_dssp T--T-E--EEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTT-CEEEESCEEEEEEE--------------------CSS
T ss_pred c--c-e--ecccccCCCCCCceEecCHHHHHHHHHHHHHhCC-CEEEcCCEEEEEEE--------------------eCC
Confidence 1 1 1 22221111 2234688999999999999999886 99999999999987 445
Q ss_pred eeEEEeCCCc---EEEeeEEEeecCCCChhhhhhCCCCCCCcccCeEEEEEEeecCCCCeeEEEecCCCcEEEeecCCCc
Q 013000 160 LAKLDLSDGT---SLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKENYCAWQRFLPAGPIALLPIGDNF 236 (451)
Q Consensus 160 ~v~v~~~dg~---~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~ 236 (451)
.|+|++.||+ +++||+||||||.+|.||+++++......+...++.+.+..+.........+.++++++++|++++.
T Consensus 139 ~v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~P~~~g~ 218 (499)
T 2qa2_A 139 HVVVEVEGPDGPRSLTTRYVVGCDGGRSTVRKAAGFDFPGTSASREMFLADIRGCEITPRPIGETVPLGMVMSAPLGDGV 218 (499)
T ss_dssp CEEEEEECSSCEEEEEEEEEEECCCTTCHHHHHTTCCCCEECCCCCEEEEEEESCCCCCEEEEEEETTEEEEEEECSSSC
T ss_pred EEEEEEEcCCCcEEEEeCEEEEccCcccHHHHHcCCCCCCCCCccEEEEEEEEECCCCcceEEEECCCeEEEEEEcCCCE
Confidence 6888888875 8999999999999999999999887776666777777777654333334456788999999999888
Q ss_pred eEEEEEcCccc-hHHhhcCCHHHHHHHHHHhhccCCCCCCCCCCCCcccccccccCCcccccccccCCCcceeeecCcce
Q 013000 237 SNIVWTMNPKD-ASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERM 315 (451)
Q Consensus 237 ~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (451)
.++++...... .......+.+++.+.+...+..... + .. .....
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------------------------------~----~~-~~~~~ 263 (499)
T 2qa2_A 219 DRIIVCERGAPARRRTGPPPYQEVAAAWQRLTGQDIS------------------------------H----GE-PVWVS 263 (499)
T ss_dssp EEEEEEETTCCCCCCSSSCCHHHHHHHHHHHHSCCCT------------------------------T----CE-EEEEE
T ss_pred EEEEEEecCCCCccccCCCCHHHHHHHHHHHhCCCCC------------------------------c----cc-eeEEE
Confidence 77777653321 1112235677888777765431000 0 00 01112
Q ss_pred eeecccccccccccCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHHHH
Q 013000 316 VFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMM 395 (451)
Q Consensus 316 ~~~~~~~~~~~~~~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~~~ 395 (451)
.|+...+.+++|..|||+|+|||||.|+|++|||+|+||+||.+|+++|...++.. ..+.+|+.|+++|++++..++
T Consensus 264 ~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~---~~~~~L~~Ye~eR~~~~~~~~ 340 (499)
T 2qa2_A 264 AFGDPARQVSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVSGR---APAGLLDTYHEERHPVGRRLL 340 (499)
T ss_dssp EECCCEEECSCSEETTEEECGGGTEEECCCSSCHHHHHHHHHHHHHHHHHHHHTTS---SCTHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCcEEcccccCCCEEEEecccccCCCccccchhhhHHHHHHHHHHHHHHHcCC---CChHHHHHHHHHHHHHHHHHH
Confidence 36666677889999999999999999999999999999999999999999987532 237899999999999999999
Q ss_pred HHHHHHHHhhcCCCchHHHHHHHHHHhhccChhHHHHHHHHhhCCC
Q 013000 396 AVLDGFQKAYSVDFGPLNILRAAAFHGAQYISPLKRNIISYASGEQ 441 (451)
Q Consensus 396 ~~s~~~~~~~~~~~~~~~~~r~~~~~~~~~~p~l~~~~~~~~~g~~ 441 (451)
..++.+..++.. ++....+|+.++.++ ..|.+++.+...++|..
T Consensus 341 ~~s~~~~~l~~~-~~~~~~~R~~~~~~~-~~~~~~~~~~~~~~~~~ 384 (499)
T 2qa2_A 341 MNTQAQGMLFLS-GDEMQPLRDVLSELI-RYDEVSRHLAGMVSGLD 384 (499)
T ss_dssp HHHHHHHHHHHC-CGGGHHHHHHHHHHH-TSSHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhcC-CchHHHHHHHHHHhh-cCHHHHHHHHHHHhCCC
Confidence 999999998874 566778999888777 67888888888887754
No 2
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=100.00 E-value=8.9e-42 Score=346.41 Aligned_cols=358 Identities=18% Similarity=0.190 Sum_probs=273.8
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHHHHHHCCCchhhhhhhcccccEEEEE
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVW 80 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~~~~~~~~~~~~~~~~~~ 80 (451)
|+||++|+.|++ +|++|+||||.+.+. ..++++.++++++++|+++|+++++... . ...... +
T Consensus 21 paGl~~A~~La~----~G~~v~vlE~~~~~~----------~~~r~~~l~~~~~~~l~~lGl~~~~~~~-~-~~~~~~-~ 83 (500)
T 2qa1_A 21 PAGMMLAGELRL----AGVEVVVLERLVERT----------GESRGLGFTARTMEVFDQRGILPRFGEV-E-TSTQGH-F 83 (500)
T ss_dssp HHHHHHHHHHHH----TTCCEEEEESCCC-C----------CCCCSEEECHHHHHHHHTTTCGGGGCSC-C-BCCEEE-E
T ss_pred HHHHHHHHHHHH----CCCCEEEEeCCCCCC----------CCCCcceECHHHHHHHHHCCCHHHHHhc-c-cccccc-c
Confidence 689999999999 499999999998873 3455999999999999999999998765 2 222221 1
Q ss_pred eCCCcceeEeecCCCC-CccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCC
Q 013000 81 DYTGLGYTKYNARDVN-KEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGH 159 (451)
Q Consensus 81 ~~~~~~~~~~~~~~~~-~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (451)
. + . .++..... ..+.++.++|..|+++|.+.+.+.+ ++|+++++|+++++ +++
T Consensus 84 ~--~-~--~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~g-v~v~~~~~v~~i~~--------------------~~~ 137 (500)
T 2qa1_A 84 G--G-L--PIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLG-ADIRRGHEVLSLTD--------------------DGA 137 (500)
T ss_dssp T--T-E--EEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTT-CEEEETCEEEEEEE--------------------ETT
T ss_pred c--c-e--ecccccCCCCCCceeecCHHHHHHHHHHHHHHCC-CEEECCcEEEEEEE--------------------cCC
Confidence 1 1 1 22221111 2234688999999999999999986 99999999999987 456
Q ss_pred eeEEEeCCCc---EEEeeEEEeecCCCChhhhhhCCCCCCCcccCeEEEEEEeecCCCCeeEEEecCCCcEEEeecCCCc
Q 013000 160 LAKLDLSDGT---SLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKENYCAWQRFLPAGPIALLPIGDNF 236 (451)
Q Consensus 160 ~v~v~~~dg~---~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~ 236 (451)
.|+|++.+|. ++++|+||||||.+|.||+++++......+...++.+.+..+.........+.++++++++|++++.
T Consensus 138 ~v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~g~ 217 (500)
T 2qa1_A 138 GVTVEVRGPEGKHTLRAAYLVGCDGGRSSVRKAAGFDFPGTAATMEMYLADIKGVELQPRMIGETLPGGMVMVGPLPGGI 217 (500)
T ss_dssp EEEEEEEETTEEEEEEESEEEECCCTTCHHHHHTTCCCCEECCCCEEEEEEEESCCCCCEEEEEEETTEEEEEEEETTTE
T ss_pred eEEEEEEcCCCCEEEEeCEEEECCCcchHHHHHcCCCcCCCccceEEEEEEEEeCCCCCceEEEECCCcEEEEEEcCCCE
Confidence 7889888875 7999999999999999999999887776676777777776654333334456788999999999887
Q ss_pred eEEEEEcCccc-hHHhhcCCHHHHHHHHHHhhccCCCCCCCCCCCCcccccccccCCcccccccccCCCcceeeecCcce
Q 013000 237 SNIVWTMNPKD-ASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERM 315 (451)
Q Consensus 237 ~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (451)
.++++..+... .......+.+++.+.+...+..... + .. .....
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------------------------------~----~~-~~~~~ 262 (500)
T 2qa1_A 218 TRIIVCERGTPPQRRETPPSWHEVADAWKRLTGDDIA------------------------------H----AE-PVWVS 262 (500)
T ss_dssp EEEEEEETTCCC-----CCCHHHHHHHHHHHHSCCCT------------------------------T----SE-EEEEE
T ss_pred EEEEEEcCCCCCccccCCCCHHHHHHHHHHhcCCCCC------------------------------c----cc-eeEEE
Confidence 77777653322 1222345677888777765431000 0 00 01112
Q ss_pred eeecccccccccccCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHHHH
Q 013000 316 VFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMM 395 (451)
Q Consensus 316 ~~~~~~~~~~~~~~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~~~ 395 (451)
.|+...+.+++|..|||+|+|||||.|+|++|||+|+||+||.+|+++|...++.. ..+.+|+.|+++|++++..++
T Consensus 263 ~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~~~g~---~~~~~L~~Y~~eR~~~~~~~~ 339 (500)
T 2qa1_A 263 AFGNATRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNGT---ATEELLDSYHSERHAVGKRLL 339 (500)
T ss_dssp EEECCEEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHTTS---SCHHHHHHHHHHHHHHHHHHH
T ss_pred EeccCcEEccccccCCEEEEEccccCCCCccccchhhhHHHHHHHHHHHHHHHcCC---CChHHHHHHHHHHHHHHHHHH
Confidence 36666677889999999999999999999999999999999999999999987532 347899999999999999999
Q ss_pred HHHHHHHHhhcCCCchHHHHHHHHHHhhccChhHHHHHHHHhhCCC
Q 013000 396 AVLDGFQKAYSVDFGPLNILRAAAFHGAQYISPLKRNIISYASGEQ 441 (451)
Q Consensus 396 ~~s~~~~~~~~~~~~~~~~~r~~~~~~~~~~p~l~~~~~~~~~g~~ 441 (451)
..++.+..++.. .+....+|+.++.++ ..|.+++.+...++|..
T Consensus 340 ~~s~~~~~l~~~-~~~~~~~R~~~~~~~-~~~~~~~~~~~~~~g~~ 383 (500)
T 2qa1_A 340 MNTQAQGLLFLS-GPEVQPLRDVLTELI-QYGEVARHLAGMVSGLE 383 (500)
T ss_dssp HHHHHHHHHHHS-CGGGHHHHHHHHHHH-TSHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHhcC-CchHHHHHHHHHHhh-cCHHHHHHHhhhhccCC
Confidence 999999998874 566778898888777 67889998888888754
No 3
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.6e-42 Score=341.98 Aligned_cols=359 Identities=19% Similarity=0.194 Sum_probs=259.4
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHHHHHHCCCchhhhhhhcccccEEEEE
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVW 80 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~~~~~~~~~~~~~~~~~~ 80 (451)
|+||++|+.|++ +|++|+||||++.++..+ +++.++++++++|+++|+++++...+. ....+.++
T Consensus 16 ~aGl~~A~~L~~----~G~~V~viE~~~~~~~~~----------~~~~l~~~~~~~l~~~g~~~~~~~~~~-~~~~~~~~ 80 (399)
T 2x3n_A 16 IGGAMLAYLLGR----QGHRVVVVEQARRERAIN----------GADLLKPAGIRVVEAAGLLAEVTRRGG-RVRHELEV 80 (399)
T ss_dssp HHHHHHHHHHHH----TTCCEEEECSSCCC---C----------CCCEECHHHHHHHHHTTCHHHHHHTTC-EEECEEEE
T ss_pred HHHHHHHHHHHh----CCCcEEEEeCCCCCCccC----------ceeeECchHHHHHHHcCcHHHHHHhCC-CcceeEEE
Confidence 589999999999 499999999998774444 499999999999999999999876554 45566777
Q ss_pred eCCCcceeEeecCCCCCccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCe
Q 013000 81 DYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL 160 (451)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (451)
+.++.....++......+..++.++|..|.+.|.+.+.+.++++|+++++|++++. .++.
T Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~--------------------~~~~ 140 (399)
T 2x3n_A 81 YHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQR--------------------DERH 140 (399)
T ss_dssp EETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEE--------------------CTTS
T ss_pred eCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEE--------------------cCCc
Confidence 76655455555433334456789999999999999999884499999999999976 3455
Q ss_pred e--EEEeCCCcEEEeeEEEeecCCCChhhhhhCCCCCCC--cccC--eEEEEEEeecCCCCeeEEEecC-CCcEEEeecC
Q 013000 161 A--KLDLSDGTSLYAKLVVGADGGKSRVRELAGFKTTGW--SYSQ--NAIICTVEHNKENYCAWQRFLP-AGPIALLPIG 233 (451)
Q Consensus 161 v--~v~~~dg~~~~adlvVgADG~~S~vR~~l~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~p~~ 233 (451)
+ .|++.||+++++|+||+|||.+|.||+.++...... .++. .++.+.++.+.+.. . ..+.+ +++++++|++
T Consensus 141 v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~p~~ 218 (399)
T 2x3n_A 141 AIDQVRLNDGRVLRPRVVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFALAPCVAERN-R-LYVDSQGGLAYFYPIG 218 (399)
T ss_dssp CEEEEEETTSCEEEEEEEEECCCTTCHHHHHTSCCCCCCCCCSSCEEEEEEECCHHHHHCE-E-EEECTTSCEEEEEEET
T ss_pred eEEEEEECCCCEEECCEEEECCCCChHHHHHhCCCccccCCCCCCceEEEEEEecCCCCCc-c-EEEcCCCcEEEEEEcC
Confidence 7 899999999999999999999999999998776555 5566 66666555433333 3 56678 8999999998
Q ss_pred CCceEEEEEc--CccchHHhhc-CCHHHHHHHHHHhhccCCCCCCCCCCCCcccccccccCCcccccccccCCCcceeee
Q 013000 234 DNFSNIVWTM--NPKDASDCKS-MNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKL 310 (451)
Q Consensus 234 ~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (451)
++. +.|.+ +......... .+.+++.+.+.. |.+. .. ... ++.
T Consensus 219 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-------~~--~~~-------------------~~~ 263 (399)
T 2x3n_A 219 FDR--ARLVVSFPREEARELMADTRGESLRRRLQR-----FVGD-------ES--AEA-------------------IAA 263 (399)
T ss_dssp TTE--EEEEEECCHHHHHHHHHSTTSHHHHHHHHT-----TCCG-------GG--HHH-------------------HHT
T ss_pred CCE--EEEEEEeCccccccccccCCHHHHHHHHhh-----cCCc-------ch--hhH-------------------Hhc
Confidence 844 44544 4432222221 344555555442 2211 00 000 011
Q ss_pred cC--cceeeeccc-ccccccccCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhh
Q 013000 311 AS--ERMVFPLSL-KHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAER 387 (451)
Q Consensus 311 ~~--~~~~~~~~~-~~~~~~~~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r 387 (451)
.. ....|++.. ...++|..|||+|+|||||.++|++|||+|+||+||..|+++|...++.+.+ .+.+|+.|+++|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~~~~~~--~~~~l~~Y~~~r 341 (399)
T 2x3n_A 264 VTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACA--LEDALAGYQAER 341 (399)
T ss_dssp CCCSTTCEECCCCCEECSCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHHHTTSSC--HHHHHHHHHHHH
T ss_pred CCccceEEechhhcccccccccCcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHhhhcccch--HHHHHHHHHHHh
Confidence 11 223467666 5678899999999999999999999999999999999999999988754333 378999999999
Q ss_pred chhhHHHHHHHHHHHHhhcCCCchHHHHHHHHHHhhccChhHHHHHH
Q 013000 388 KPANIVMMAVLDGFQKAYSVDFGPLNILRAAAFHGAQYISPLKRNII 434 (451)
Q Consensus 388 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~r~~~~~~~~~~p~l~~~~~ 434 (451)
++++..++..++.+..+++..+++..++ +..++++...|.+...-.
T Consensus 342 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~ 387 (399)
T 2x3n_A 342 FPVNQAIVSYGHALATSLEDRQRFAGVF-DTALQGSSRTPEALGGER 387 (399)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHH-HC----------------
T ss_pred ccHHHHHHHHHHHhhhhhcccCchHHHH-HHHHhhhcCCCcccCCcc
Confidence 9999999999999999999888888888 999998888875554433
No 4
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=100.00 E-value=2.1e-42 Score=355.42 Aligned_cols=365 Identities=19% Similarity=0.193 Sum_probs=276.7
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHHHHHHCCCchhhhhhhcccccEEEEE
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVW 80 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~~~~~~~~~~~~~~~~~~ 80 (451)
|+||++|+.|+++ |++|+||||.+.+. ..++++.|+++++++|+++|+++++...+...... .+
T Consensus 59 ~aGL~~A~~La~~----G~~V~VlEr~~~~~----------~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~--~~ 122 (570)
T 3fmw_A 59 PVGLMLAGELRAG----GVGALVLEKLVEPV----------GHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGL--PF 122 (570)
T ss_dssp HHHHHHHHHHHHT----TCCEEEEBSCSSCC----------CSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBC--CB
T ss_pred HHHHHHHHHHHHC----CCCEEEEcCCCCCC----------CCceEEEECHHHHHHHHHcCChHHHHhcCcccCCc--ee
Confidence 6899999999994 99999999998873 44559999999999999999999998876532211 01
Q ss_pred eCCCcceeEeecCCCCCccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCe
Q 013000 81 DYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL 160 (451)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (451)
.........+.... .....++.++|..|++.|.+.+.+.+ ++|+++++|++++. .++.
T Consensus 123 ~~~~~~~~~~~~~~-~~~~~~~~i~~~~l~~~L~~~a~~~g-v~i~~~~~v~~l~~--------------------~~~~ 180 (570)
T 3fmw_A 123 AGIFTQGLDFGLVD-TRHPYTGLVPQSRTEALLAEHAREAG-AEIPRGHEVTRLRQ--------------------DAEA 180 (570)
T ss_dssp TTBCTTCCBGGGSC-CSCCSBBCCCHHHHHHHHHHHHHHHT-EECCBSCEEEECCB--------------------CSSC
T ss_pred CCcccccccccccC-CCCCeeEEeCHHHHHHHHHHHHHhCC-CEEEeCCEEEEEEE--------------------cCCe
Confidence 11100012221111 12334678999999999999999886 99999999999976 4456
Q ss_pred eEEEe--CCC-cEEEeeEEEeecCCCChhhhhhCCCCCCCcccCeEEEEEEeecCCCCeeEE-EecCCCcEEE-eecCCC
Q 013000 161 AKLDL--SDG-TSLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKENYCAWQ-RFLPAGPIAL-LPIGDN 235 (451)
Q Consensus 161 v~v~~--~dg-~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~-~p~~~~ 235 (451)
++|++ .|| ++++||+||+|||.+|.||+++++......+...++.+.+....+. ..+. .+.+.|++++ +|++++
T Consensus 181 v~v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~lGi~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~G~~~~~~P~~~g 259 (570)
T 3fmw_A 181 VEVTVAGPSGPYPVRARYGVGCDGGRSTVRRLAADRFPGTEATVRALIGYVTTPERE-VPRRWERTPDGILVLAFPPEGG 259 (570)
T ss_dssp EEEEEEETTEEEEEEESEEEECSCSSCHHHHHTTCCCCCCCCCEEEEEEECCCCSCS-SCCCCCCCCSSCEEECCCC---
T ss_pred EEEEEEeCCCcEEEEeCEEEEcCCCCchHHHHcCCCCccceeeeEEEEEEEEecCCC-cceEEEecCCEEEEEEeecCCC
Confidence 77877 788 6899999999999999999999998888888888887777766554 1222 3557788887 899988
Q ss_pred ce-EEEEEcCccch-HHhhcCCHHHHHHHHHHhhccCCCCCCCCCCCCcccccccccCCcccccccccCCCcceeeecCc
Q 013000 236 FS-NIVWTMNPKDA-SDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASE 313 (451)
Q Consensus 236 ~~-~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (451)
.. +++|..+.... ......+.+++.+.+...+..... .......
T Consensus 260 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----------------------------------~~~~~~~ 305 (570)
T 3fmw_A 260 LGPGWSSSSTGHSPAADEGPVTLEDLGAAVARVRGTPLT----------------------------------LTEPVSW 305 (570)
T ss_dssp ---CEEEEEESCC-----CCCCHHHHHHHTTSSSSCCCC----------------------------------CCSCCEE
T ss_pred eEEEEEEEeCCCCccccccCCCHHHHHHHHHHHhhcccc----------------------------------cceeeee
Confidence 77 78777653322 223345667776665542220000 0111112
Q ss_pred ceeeecccccccccccCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHH
Q 013000 314 RMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIV 393 (451)
Q Consensus 314 ~~~~~~~~~~~~~~~~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~ 393 (451)
...|++..+.+++|..|||+|+|||||.++|++|||+|+||+||.+|+++|...++.. ..+.+|+.|+++|++++..
T Consensus 306 ~~~~~~~~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~gl~DA~~La~~La~~~~g~---~~~~lL~~Ye~eR~~~~~~ 382 (570)
T 3fmw_A 306 LSRFGDASRQAKRYRSGRVLLAGDAAHVHFPIGGQGLNTGLQDAVNLGWKLAARVRGW---GSEELLDTYHDERHPVAER 382 (570)
T ss_dssp EEEECCCCEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHHSC---CCHHHHHHHHHHHHHHHHH
T ss_pred eEEeecccccccccccCCEEEEEecceecCCCcCcCHhHHHHHHHHHHHHHHHHHcCC---CcHHHHHHHHHHHHHHHHH
Confidence 3357888888899999999999999999999999999999999999999999987642 3489999999999999999
Q ss_pred HHHHHHHHHHhhcCCCchHHHHHHHHHHhhccChhHHHHHHHHhhCCCC
Q 013000 394 MMAVLDGFQKAYSVDFGPLNILRAAAFHGAQYISPLKRNIISYASGEQR 442 (451)
Q Consensus 394 ~~~~s~~~~~~~~~~~~~~~~~r~~~~~~~~~~p~l~~~~~~~~~g~~~ 442 (451)
++..++.+..+++..+.+...+|+..+.++ ..|.+++.+++.++|+..
T Consensus 383 ~~~~s~~~~~l~~~~~~~~~~lR~~~~~l~-~~~~~~~~~~~~~~g~~~ 430 (570)
T 3fmw_A 383 VLLNTRAQLALMRPDEQHTTPLRGFVEELL-GTDEVNRYFTGMITGTDV 430 (570)
T ss_dssp HHHHHHHHHHHSCSCTTTHHHHHHHHHHHT-TSHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHh-cCHHHHHHHHHHHhCCCc
Confidence 999999999999886666899999999999 799999999999998763
No 5
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=100.00 E-value=1.8e-41 Score=336.81 Aligned_cols=360 Identities=16% Similarity=0.218 Sum_probs=267.1
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHHHHHHCCCchhhhhhhcccccEEEEE
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVW 80 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~~~~~~~~~~~~~~~~~~ 80 (451)
|+||++|+.|++ +|++|+||||.+.++.. ++++.++++++++|+++|+++++...+. +...+.++
T Consensus 33 ~aGl~~A~~La~----~G~~V~v~E~~~~~~~~----------~~~~~l~~~~~~~l~~lg~~~~~~~~~~-~~~~~~~~ 97 (407)
T 3rp8_A 33 IGGLSAAVALKQ----SGIDCDVYEAVKEIKPV----------GAAISVWPNGVKCMAHLGMGDIMETFGG-PLRRMAYR 97 (407)
T ss_dssp HHHHHHHHHHHH----TTCEEEEEESSSCC--------------CEEEECHHHHHHHHHTTCHHHHHHHSC-CCCEEEEE
T ss_pred HHHHHHHHHHHh----CCCCEEEEeCCCCCCCc----------CeeEEECHHHHHHHHHCCCHHHHHhhcC-CCcceEEE
Confidence 689999999999 49999999999887444 4499999999999999999999988776 66788888
Q ss_pred eCC-CcceeEeecCCC--CCccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccC
Q 013000 81 DYT-GLGYTKYNARDV--NKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTK 157 (451)
Q Consensus 81 ~~~-~~~~~~~~~~~~--~~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (451)
+.. +.....++.... .....++.++|..|++.|.+.+.+ ++|+++++|++++. .
T Consensus 98 ~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v~~i~~--------------------~ 154 (407)
T 3rp8_A 98 DFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR---DSVQFGKRVTRCEE--------------------D 154 (407)
T ss_dssp ETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG---GGEEESCCEEEEEE--------------------E
T ss_pred ECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc---CEEEECCEEEEEEe--------------------c
Confidence 876 555555542210 012346889999999999999975 78999999999987 5
Q ss_pred CCeeEEEeCCCcEEEeeEEEeecCCCChhhhhh-CCCCCCCcccCeEEEEEEeecC--CCCeeE-EEecCCCcEEEeecC
Q 013000 158 GHLAKLDLSDGTSLYAKLVVGADGGKSRVRELA-GFKTTGWSYSQNAIICTVEHNK--ENYCAW-QRFLPAGPIALLPIG 233 (451)
Q Consensus 158 ~~~v~v~~~dg~~~~adlvVgADG~~S~vR~~l-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~g~~~~~p~~ 233 (451)
++.++|++.||+++.+|+||+|||.+|.||+++ +........+..++.+.++.+. .....+ ..+.++++++++|++
T Consensus 155 ~~~v~v~~~~g~~~~a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 234 (407)
T 3rp8_A 155 ADGVTVWFTDGSSASGDLLIAADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTTFVGEGKQVSLMPVS 234 (407)
T ss_dssp TTEEEEEETTSCEEEESEEEECCCTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEEEEETTEEEEEEEET
T ss_pred CCcEEEEEcCCCEEeeCEEEECCCcChHHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEEEECCCcEEEEEEcC
Confidence 567999999999999999999999999999999 6654444555556666665432 222333 344788999999999
Q ss_pred CCceEEEEEcCccchHHhhcCCHHHHHHHHHHhhccCCCCCCCCCCCCcccccccccCCcccccccccCCCcceeeecCc
Q 013000 234 DNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASE 313 (451)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (451)
++...+++....... ...+.+.+.+.+.+.+. .|.+. ..++++.. .+.. ...
T Consensus 235 ~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~-~~~~~-------~~~~~~~~--------------~~~~---~~~ 286 (407)
T 3rp8_A 235 AGRFYFFFDVPLPAG---LAEDRDTLRADLSRYFA-GWAPP-------VQKLIAAL--------------DPQT---TNR 286 (407)
T ss_dssp TTEEEEEEEEECCTT---CSCCTTTHHHHHHHHTT-TCCHH-------HHHHHHHS--------------CGGG---CEE
T ss_pred CCeEEEEEEeCCCcC---CCCCchhHHHHHHHHhc-CCChH-------HHHHHHcC--------------Cccc---eeE
Confidence 988777776643321 12344456666666554 23221 00111110 0000 000
Q ss_pred ceeeecccccccccccCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHH
Q 013000 314 RMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIV 393 (451)
Q Consensus 314 ~~~~~~~~~~~~~~~~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~ 393 (451)
...+++.. .++|..+||+|||||||.++|++|||+|+||+||..|+++|... + ..+.+|+.|+++|++++..
T Consensus 287 ~~~~~~~~--~~~~~~~rv~LvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~---~---~~~~~l~~Y~~~r~~~~~~ 358 (407)
T 3rp8_A 287 IEIHDIEP--FSRLVRGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFRQT---R---DIAAALREYEAQRCDRVRD 358 (407)
T ss_dssp EEEEECCC--CSCCEETTEEECGGGTCCCCGGGSCHHHHHHHHHHHHHHHHHSC---C---CHHHHHHHHHHHHHHHHHH
T ss_pred EeeEecCC--CCceecCCEEEEEcccccCCcchhhhHHHHHHHHHHHHHHHhcC---C---CHHHHHHHHHHHHHHHHHH
Confidence 11123222 37889999999999999999999999999999999999999853 1 4589999999999999999
Q ss_pred HHHHHHHHHHhhcCCCchHHHHHHHHHHhhccChhHHHHHHH
Q 013000 394 MMAVLDGFQKAYSVDFGPLNILRAAAFHGAQYISPLKRNIIS 435 (451)
Q Consensus 394 ~~~~s~~~~~~~~~~~~~~~~~r~~~~~~~~~~p~l~~~~~~ 435 (451)
++..++.+..+++..++...+.|+..+..... +.+.+.+..
T Consensus 359 ~~~~s~~~~~~~~~~~~~~~~~R~~~l~~~~~-~~~~~~~~~ 399 (407)
T 3rp8_A 359 LVLKARKRCDITHGKDMQLTEAWYQELREETG-ERIINGMCD 399 (407)
T ss_dssp HHHHHHHHHHHHTTTTHHHHHHHHHHHHSCCS-HHHHHHHHH
T ss_pred HHHHHHHhhhhhhcCCHHHHHHHHHHHhhccH-HHHHHhhhh
Confidence 99999999999999999999999999987753 445555444
No 6
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=100.00 E-value=1.6e-40 Score=329.94 Aligned_cols=354 Identities=14% Similarity=0.133 Sum_probs=223.7
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHHHHHHCCCchhhhhhhc---ccccEE
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRH---AYFDKM 77 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~~~~~~~~~---~~~~~~ 77 (451)
||||++|+.|++ +|++|+||||++.+... ..+.++.|+++++++|+++|+.+.+..... ......
T Consensus 11 paGl~~A~~L~~----~G~~v~v~Er~~~~~~~--------~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~ 78 (412)
T 4hb9_A 11 IGGTCLAHGLRK----HGIKVTIYERNSAASSI--------LPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQS 78 (412)
T ss_dssp HHHHHHHHHHHH----TTCEEEEECSSCSSCSS--------CCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCC
T ss_pred HHHHHHHHHHHh----CCCCEEEEecCCCCCcC--------CCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcce
Confidence 689999999999 49999999999887322 235589999999999999999887654221 111222
Q ss_pred EEEeCCCcceeEee-cC---CCCCccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccc
Q 013000 78 QVWDYTGLGYTKYN-AR---DVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATT 153 (451)
Q Consensus 78 ~~~~~~~~~~~~~~-~~---~~~~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 153 (451)
.+++.......... .. ........+.++|..|+++|.+.+. .+|+++++|++++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~----~~v~~~~~v~~~~~----------------- 137 (412)
T 4hb9_A 79 RFYNERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLA----NTIQWNKTFVRYEH----------------- 137 (412)
T ss_dssp EEECTTSCEEEC--------------CEEEEEHHHHHHHHHTTCT----TTEECSCCEEEEEE-----------------
T ss_pred eEecCCcceecccCCccccccccccccceEeeHHHHHHHHHhhcc----ceEEEEEEEEeeeE-----------------
Confidence 33333322211110 00 0111223467999999999998763 47999999999976
Q ss_pred cccCCCeeEEEeCCCcEEEeeEEEeecCCCChhhhhhCCCCCCCcccCeEEEEEEeecCCC---------CeeEEEecCC
Q 013000 154 LFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKEN---------YCAWQRFLPA 224 (451)
Q Consensus 154 ~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 224 (451)
..++.++|+++||++++||+||||||++|.||+++++......++..++.+.+...... ......+.+.
T Consensus 138 --~~~~~v~v~~~dG~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (412)
T 4hb9_A 138 --IENGGIKIFFADGSHENVDVLVGADGSNSKVRKQYLPFIERFDVGVSMIIGRARLTPALTALLPQNFRDGTPNSIVPK 215 (412)
T ss_dssp --CTTSCEEEEETTSCEEEESEEEECCCTTCHHHHHHSTTCCCEEEEEEEEEEEEECCHHHHHHSCGGGTSSCCEEECCS
T ss_pred --cCCCeEEEEECCCCEEEeeEEEECCCCCcchHHHhCCCccccccceeEEEEEEecchhhhcchhhhhccCCcceEeec
Confidence 23467999999999999999999999999999999888777777777777766654211 0000111111
Q ss_pred C--------------cEEEeecCCCceEEEEEcCcc---chHHhhcCCHHHHHHHHHHhhccCCCCCCCCCCCCcccccc
Q 013000 225 G--------------PIALLPIGDNFSNIVWTMNPK---DASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFS 287 (451)
Q Consensus 225 g--------------~~~~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 287 (451)
+ ....++.......+.|..... ..........+.+.+.+...+. +|.+. ..++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~-------~~~li~ 287 (412)
T 4hb9_A 216 SPDWLFISMWRAPVNIHVEASLAEIDNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMI-SWDPS-------LHTLVQ 287 (412)
T ss_dssp SSEEEEEEEEEEESCTTSCGGGCCEEEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTT-TSCHH-------HHHHHH
T ss_pred CCCcceeeeeecCCceeEEEeccCCCceEEEEEecccccccccccccchHHHHHHHHHHhc-cCChH-------HHHHHH
Confidence 1 111111112122222322111 1122334566777777777655 44332 111111
Q ss_pred cccCCcccccccccCCCcceeeecCcceeeeccc-ccccccccCCEEEEcccccccCCcchhccccchHHHHHHHHHHHH
Q 013000 288 WFRGDATLSAKECFEVPPRVVKLASERMVFPLSL-KHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAE 366 (451)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~ 366 (451)
. .+ ......+.+.. ....+|..|||+|||||||.|+|+.|||+|+||+||.+|+++|..
T Consensus 288 ~----~~----------------~~~~~~~~~~~~~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~ 347 (412)
T 4hb9_A 288 Q----SD----------------MENISPLHLRSMPHLLPWKSSTVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLAS 347 (412)
T ss_dssp T----SC----------------TTCCEEEEEEECCCCCCCCCCSEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHH
T ss_pred h----cc----------------cceeccchhccccccccccccCEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 1 00 00011122221 235679999999999999999999999999999999999999999
Q ss_pred hhhcCCCCChHHHHHHHHHhhchhhHHHHHHHHHHHHh--hcCCCchHHHHHHHHH
Q 013000 367 GIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQKA--YSVDFGPLNILRAAAF 420 (451)
Q Consensus 367 ~~~~~~~~~~~~~l~~Ye~~r~~~~~~~~~~s~~~~~~--~~~~~~~~~~~r~~~~ 420 (451)
......+ .+.+|+.||++|++++..+++.|+..... ++...+.. ..|+..+
T Consensus 348 ~~~~~~~--~~~aL~~Ye~~R~~~~~~~~~~s~~~~~~~~~~~~~~~~-~~r~~~~ 400 (412)
T 4hb9_A 348 VASGHEE--LVKAISDYEQQMRAYANEIVGISLRSAQNAVIHFSIPPL-KQRHLSI 400 (412)
T ss_dssp HHTTSSC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-----------
T ss_pred HhcCCcC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchH-HHHHHHH
Confidence 8765543 48899999999999999999998876653 34443332 3344444
No 7
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=100.00 E-value=2.9e-39 Score=337.91 Aligned_cols=344 Identities=19% Similarity=0.256 Sum_probs=249.6
Q ss_pred CcHHHHHHHhcC-----CCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHHHHHHCCCchhhhhhhccccc
Q 013000 1 MVGMALACSLAS-----MPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFD 75 (451)
Q Consensus 1 paGl~lA~~L~~-----~~~~~g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~~~~~~~~~~~~~ 75 (451)
|+||++|+.|++ . |++|+||||++.+ ...++++.|+++++++|+++|+++++...+. +..
T Consensus 18 paGL~lA~~La~~~~~~~----Gi~v~viE~~~~~----------~~~gra~~l~~~tle~l~~lGl~~~l~~~~~-~~~ 82 (665)
T 1pn0_A 18 PAGLMAARVLSEYVRQKP----DLKVRIIDKRSTK----------VYNGQADGLQCRTLESLKNLGLADKILSEAN-DMS 82 (665)
T ss_dssp HHHHHHHHHHHHHHHHST----TCCEEEECSSSSC----------CCSCSCCEECHHHHHHHHTTTCHHHHHTTCB-CCC
T ss_pred HHHHHHHHHHhccccccC----CCCEEEEeCCCCC----------CCCCceeEEChHHHHHHHHCCCHHHHHHhcc-ccc
Confidence 689999999999 7 9999999999877 3456699999999999999999999988766 567
Q ss_pred EEEEEeCCCccee----EeecCC-CCCccceeeechHHHHHHHHHHhhcCC--CceEEcCCeeEEEEeCCCCCCcccCCC
Q 013000 76 KMQVWDYTGLGYT----KYNARD-VNKEILGCVVENKVLHSSLLSCMQNTE--FQKTIYPSRLTSMALLPSSSSISVDST 148 (451)
Q Consensus 76 ~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~i~R~~L~~~L~~~~~~~g--~v~i~~~~~v~~~~~~~~~~~~~~~~~ 148 (451)
.+.+|+.+....+ .++... .......+.++|..|+++|.+.+.+.+ +++|+++++|++++.+... .++
T Consensus 83 ~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~-----~~~ 157 (665)
T 1pn0_A 83 TIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSK-----AED 157 (665)
T ss_dssp EEEEEEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGG-----TTC
T ss_pred eEEEEeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcc-----ccc
Confidence 7888875532222 122111 112234577999999999999998875 5899999999999872100 000
Q ss_pred CCccccccCCCeeEEEeC------------------------------------------CC--cEEEeeEEEeecCCCC
Q 013000 149 PSATTLFTKGHLAKLDLS------------------------------------------DG--TSLYAKLVVGADGGKS 184 (451)
Q Consensus 149 ~~~~~~~~~~~~v~v~~~------------------------------------------dg--~~~~adlvVgADG~~S 184 (451)
. .+..|+|++. +| ++++||+||||||++|
T Consensus 158 ~-------~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S 230 (665)
T 1pn0_A 158 P-------EAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHS 230 (665)
T ss_dssp T-------TCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTC
T ss_pred C-------CCCCEEEEEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCC
Confidence 0 1234666553 45 4799999999999999
Q ss_pred hhhhhhCCCCCCCcccCeEEEEEEee--cCCC-CeeEEEe-cCCCcEEEeecCCCceEEEEEcCccchH----HhhcCCH
Q 013000 185 RVRELAGFKTTGWSYSQNAIICTVEH--NKEN-YCAWQRF-LPAGPIALLPIGDNFSNIVWTMNPKDAS----DCKSMNE 256 (451)
Q Consensus 185 ~vR~~l~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~-~~~g~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~~~ 256 (451)
.||+++++......+...+....+.. +.+. ......+ .+.|+++++|++++..++++..+..... .....+.
T Consensus 231 ~VR~~lg~~~~g~~~~~~~~v~d~~~~~~~p~~~~~~~~~~~~~g~~~~~P~~~~~~r~~~~~~~~~~~~~~~~~~~~t~ 310 (665)
T 1pn0_A 231 WVRRTLGFEMIGEQTDYIWGVLDAVPASNFPDIRSRCAIHSAESGSIMIIPRENNLVRFYVQLQARAEKGGRVDRTKFTP 310 (665)
T ss_dssp HHHHHHTCCCEEEEEEEEEEEEEEEEECCCTTTTSEEEEECSSSCEEEEEECSTTCEEEEEEECC----------CCCCH
T ss_pred HHHHhcCCCCCCCCccEEEEEEEEEECCCCCCcceEEEEEeCCCceEEEEEcCCCEEEEEEEeCCccccccccCcCCCCH
Confidence 99999998776555544433333322 2222 1122222 3688999999999888888877654311 2234567
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCcccccccccCCcccccccccCCCcceeeecCcceeeecccccccccc-cCCEEEE
Q 013000 257 DDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYV-SKRVVLI 335 (451)
Q Consensus 257 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~v~Lv 335 (451)
+++.+.+...+. .+. + .+ ....+...|++..+.+++|. .|||+|+
T Consensus 311 e~~~~~~~~~~~-~~~------------------------------~--~~-~~~~~~~~~~~~~r~a~~~~~~gRV~L~ 356 (665)
T 1pn0_A 311 EVVIANAKKIFH-PYT------------------------------F--DV-QQLDWFTAYHIGQRVTEKFSKDERVFIA 356 (665)
T ss_dssp HHHHHHHHHHHT-TSC------------------------------C--EE-EEEEEEEEEEEEEEECSCSEETTTEEEC
T ss_pred HHHHHHHHHHhC-ccc------------------------------C--ce-eeEEEEEeeeccceehhhcccCCCEEEE
Confidence 788877766443 110 0 00 11122334777777889998 7999999
Q ss_pred cccccccCCcchhccccchHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHHHHHHHHHHHHhhcCC
Q 013000 336 GDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQKAYSVD 408 (451)
Q Consensus 336 GDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~~~~~s~~~~~~~~~~ 408 (451)
|||||.++|+.|||+|+||+||.+|+++|...++.. ..+.+|+.|+++|++++..++..++.+..++...
T Consensus 357 GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~g~---a~~~lL~tYe~eR~p~a~~~i~~s~~~~~l~~~~ 426 (665)
T 1pn0_A 357 GDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLTGR---AKRDILKTYEEERQPFAQALIDFDHQFSRLFSGR 426 (665)
T ss_dssp GGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHTTC---BCGGGGHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred ECccccCCCcccCCcchhHHHHHHHHHHHHHHHcCC---CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999988632 3478999999999999999999999999998765
No 8
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=100.00 E-value=3.3e-39 Score=319.16 Aligned_cols=367 Identities=14% Similarity=0.088 Sum_probs=259.5
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHHHHHHCCCchhhhhhhcccccEEEEE
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVW 80 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~~~~~~~~~~~~~~~~~~ 80 (451)
|+||++|+.|++ +|++|+||||.+.+.. ....++..++++++++|+++|+++++...+. +...+.++
T Consensus 12 ~aGl~~A~~L~~----~G~~v~v~E~~~~~~~--------~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~-~~~~~~~~ 78 (394)
T 1k0i_A 12 PSGLLLGQLLHK----AGIDNVILERQTPDYV--------LGRIRAGVLEQGMVDLLREAGVDRRMARDGL-VHEGVEIA 78 (394)
T ss_dssp HHHHHHHHHHHH----HTCCEEEECSSCHHHH--------HTCCCCCEECHHHHHHHHHTTCCHHHHHHCE-EESCEEEE
T ss_pred HHHHHHHHHHHH----CCCCEEEEeCCCCCcc--------cCCCceEeECHHHHHHHHHcCCcHHHHhcCC-ccceEEEE
Confidence 689999999999 4999999999875300 0112244699999999999999999987665 45566666
Q ss_pred eCCCcceeEeecCCCCCccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCe
Q 013000 81 DYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL 160 (451)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (451)
.........+. .......++.++|..|.+.|.+.+.+.+ ++|+++++|++++. +.++.
T Consensus 79 ~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~g-~~i~~~~~v~~i~~-------------------~~~~~ 136 (394)
T 1k0i_A 79 FAGQRRRIDLK--RLSGGKTVTVYGQTEVTRDLMEAREACG-ATTVYQAAEVRLHD-------------------LQGER 136 (394)
T ss_dssp ETTEEEEECHH--HHHTSCCEEECCHHHHHHHHHHHHHHTT-CEEESSCEEEEEEC-------------------TTSSS
T ss_pred ECCceEEeccc--cccCCCceEEechHHHHHHHHHHHHhcC-CeEEeceeEEEEEE-------------------ecCCc
Confidence 54432222221 1111235678899999999999998876 89999999999975 12245
Q ss_pred eEEEe-CCCc--EEEeeEEEeecCCCChhhhhhCCCCCCCcccC--eEEEEEEee-cCCCCeeEEEecCCCcEEEeecCC
Q 013000 161 AKLDL-SDGT--SLYAKLVVGADGGKSRVRELAGFKTTGWSYSQ--NAIICTVEH-NKENYCAWQRFLPAGPIALLPIGD 234 (451)
Q Consensus 161 v~v~~-~dg~--~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~p~~~ 234 (451)
+.|++ .||+ ++++|+||+|||.+|.||++++.......... ..+...+.. +...........+++++++.|.++
T Consensus 137 ~~v~~~~~g~~~~~~a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 216 (394)
T 1k0i_A 137 PYVTFERDGERLRLDCDYIAGCDGFHGISRQSIPAERLKVFERVYPFGWLGLLADTPPVSHELIYANHPRGFALCSQRSA 216 (394)
T ss_dssp CEEEEEETTEEEEEECSEEEECCCTTCSTGGGSCGGGCEEEEEEEEEEEEEEEESSCCSCSSCEEECCTTCCEEEEEEET
T ss_pred eEEEEecCCcEEEEEeCEEEECCCCCcHHHHhcCccccccccccccceeEEEecCCCCCccceEEEEcCCceEEEEecCC
Confidence 77877 7887 79999999999999999999975432111111 112222221 111122222234667777777666
Q ss_pred CceEEEEEcCccchHHhhcCCHHHHHHHHHHhhccCCCCCCCCCCCCcccccccccCCcccccccccCCCc-ceeeecCc
Q 013000 235 NFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPP-RVVKLASE 313 (451)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 313 (451)
+..++++..+... .....+.+.+.+.+.+.+.. + ..+ . +.. ... .
T Consensus 217 ~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~-~--------------~~~----------~---~~~~~~~----~ 262 (394)
T 1k0i_A 217 TRSQYYVQVPLSE--KVEDWSDERFWTELKARLPS-E--------------VAE----------K---LVTGPSL----E 262 (394)
T ss_dssp TEEEEEEEECTTC--CGGGCCHHHHHHHHHHTSCH-H--------------HHH----------H---CCCCCEE----E
T ss_pred CcEEEEEEeCCCC--CccccCHHHHHHHHHHhhCc-c--------------ccc----------c---cccCcce----e
Confidence 6677777665432 12234566666666664330 0 000 0 000 000 1
Q ss_pred ceeeecccccccccccCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHH
Q 013000 314 RMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIV 393 (451)
Q Consensus 314 ~~~~~~~~~~~~~~~~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~ 393 (451)
...+|+.....++|..|||+|||||||.|+|+.|||+|+||+||..|+++|...+..+ .+.+|+.|+++|++++..
T Consensus 263 ~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~~~~----~~~~L~~Y~~~r~~~~~~ 338 (394)
T 1k0i_A 263 KSIAPLRSFVVEPMQHGRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYREG----RGELLERYSAICLRRIWK 338 (394)
T ss_dssp EEEEEEEEEEEECSEETTEEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHHHHHHC----CGGGGGGHHHHHHHHHHH
T ss_pred eEEEEhhhhhccccccCCEEEEechhhcCCCcccchHHHHHHHHHHHHHHHHHHhccC----chHHHHHHHHHHHHHHHH
Confidence 1235555556778889999999999999999999999999999999999999876543 156899999999999999
Q ss_pred HHHHHHHHHHhhcC---CCchHHHHHHHHHHhhccChhHHHHHHHHhhCC
Q 013000 394 MMAVLDGFQKAYSV---DFGPLNILRAAAFHGAQYISPLKRNIISYASGE 440 (451)
Q Consensus 394 ~~~~s~~~~~~~~~---~~~~~~~~r~~~~~~~~~~p~l~~~~~~~~~g~ 440 (451)
++..++.+..+++. .+++...+|+..|..+...|.+++.+++.++|+
T Consensus 339 ~~~~s~~~~~~~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~g~ 388 (394)
T 1k0i_A 339 AERFSWWMTSVLHRFPDTDAFSQRIQQTELEYYLGSEAGLATIAENYVGL 388 (394)
T ss_dssp HHHHHHHHHHHHSCCTTCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcCCHHHHHHHHHHhcCC
Confidence 99999998888763 357888999999999999999999999999997
No 9
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=100.00 E-value=6.8e-38 Score=321.70 Aligned_cols=333 Identities=20% Similarity=0.231 Sum_probs=246.8
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHHHHHHCCCchhhhhhhccccc--EE-
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFD--KM- 77 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~~~~~~~~~~~~~--~~- 77 (451)
|+||++|+.|+++ |++|+||||.+.+ ...+++..++++++++|+++|+.+++...+..... .+
T Consensus 15 ~aGl~~A~~La~~----G~~v~viEr~~~~----------~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~ 80 (535)
T 3ihg_A 15 LGGLSTAMFLARQ----GVRVLVVERRPGL----------SPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFV 80 (535)
T ss_dssp HHHHHHHHHHHTT----TCCEEEECSSSSC----------CCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCE
T ss_pred HHHHHHHHHHHHC----CCCEEEEeCCCCC----------CCCCccceECHHHHHHHHHcCCHHHHHhhCCCccccccee
Confidence 6899999999994 9999999999887 34556899999999999999999999887653211 12
Q ss_pred --EEEeCCCccee----EeecC----CCCCccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCC
Q 013000 78 --QVWDYTGLGYT----KYNAR----DVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDS 147 (451)
Q Consensus 78 --~~~~~~~~~~~----~~~~~----~~~~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~ 147 (451)
.+....+.... .++.. ....+...+.++|..|+++|.+.+.+.+ ++|+++++|++++.
T Consensus 81 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~g-v~i~~~~~v~~i~~----------- 148 (535)
T 3ihg_A 81 IRLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHG-GAIRFGTRLLSFRQ----------- 148 (535)
T ss_dssp EEEESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTT-CEEESSCEEEEEEE-----------
T ss_pred eeEEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCC-CEEEeCCEEEEEEE-----------
Confidence 12222222222 11110 0011223578999999999999999986 99999999999987
Q ss_pred CCCccccccCCC----eeEEEeCCC---cEEEeeEEEeecCCCChhhhhhCCCCCCCcccCeEEEEEEeecCCC------
Q 013000 148 TPSATTLFTKGH----LAKLDLSDG---TSLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKEN------ 214 (451)
Q Consensus 148 ~~~~~~~~~~~~----~v~v~~~dg---~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~------ 214 (451)
.++ ++++++.++ .+++||+||+|||.+|.||+++++......+....+...+..+.+.
T Consensus 149 ---------~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (535)
T 3ihg_A 149 ---------HDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFDADLSGIMEPGT 219 (535)
T ss_dssp ---------ECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEECCGGGTSCTTC
T ss_pred ---------CCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEeccChhhccCCc
Confidence 334 788888877 6899999999999999999999988765555444444444443221
Q ss_pred CeeEEEecCCCcEEEeecCC-CceEEEEEcCccchHHhhcCCHHHHHHHHHHhhccCCCCCCCCCCCCcccccccccCCc
Q 013000 215 YCAWQRFLPAGPIALLPIGD-NFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDA 293 (451)
Q Consensus 215 ~~~~~~~~~~g~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (451)
...+..+.+.++.+++|+.+ +...+.|..+++........+.+.+.+.+...+....
T Consensus 220 ~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~~---------------------- 277 (535)
T 3ihg_A 220 TGWYYLHHPEFKGTFGPTDRPDRHTLFVEYDPDEGERPEDFTPQRCVELIGLALDAPE---------------------- 277 (535)
T ss_dssp CEEEEEECSSCEEEEEECSSTTEEEEEEEECTTTTCCGGGCCHHHHHHHHHHHHTCSS----------------------
T ss_pred eEEEEEECCCceEEEEEecCCCEEEEEEeeCccccCccccCCHHHHHHHHHHHhCCCC----------------------
Confidence 12334456788888899986 5666667666554333445677888888877553100
Q ss_pred ccccccccCCCcceeeecCcceeeecccccccccccCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhcCCC
Q 013000 294 TLSAKECFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGAD 373 (451)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~ 373 (451)
.+.++ .....|++....+++|..|||+|+|||||.|+|++|||+|+||+||.+|+++|...++..
T Consensus 278 ---------~~~~~----~~~~~~~~~~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g~-- 342 (535)
T 3ihg_A 278 ---------VKPEL----VDIQGWEMAARIAERWREGRVFLAGDAAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQGQ-- 342 (535)
T ss_dssp ---------CCCEE----EEEEEEEEEEEEESCSEETTEEECTTTTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTS--
T ss_pred ---------CceeE----EEeeEeeeeEEEECccccCCEEEEecccccCCCccCCccccccccHHHHHHHHHHHhcCC--
Confidence 00011 112347777778899999999999999999999999999999999999999999987643
Q ss_pred CChHHHHHHHHHhhchhhHHHHHHHHHHHHhhc
Q 013000 374 IGEASLLKKYEAERKPANIVMMAVLDGFQKAYS 406 (451)
Q Consensus 374 ~~~~~~l~~Ye~~r~~~~~~~~~~s~~~~~~~~ 406 (451)
..+.+|+.|+++|++++..++..+......+.
T Consensus 343 -~~~~lL~~Ye~eR~p~a~~~~~~s~~~~~~~~ 374 (535)
T 3ihg_A 343 -AGAGLLDTYEDERKVAAELVVAEALAIYAQRM 374 (535)
T ss_dssp -SCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -CcHHHHHhhHHHHHHHHHHHHHHHHHhhHhhc
Confidence 23688999999999999999999988876653
No 10
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=100.00 E-value=4.1e-37 Score=316.03 Aligned_cols=343 Identities=21% Similarity=0.241 Sum_probs=238.7
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHHHHHHCCCchhhhhhhccccc--EEE
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFD--KMQ 78 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~~~~~~~~~~~~~--~~~ 78 (451)
|+||++|+.|++ +|++|+||||.+.+. ..+++..++++++++|+++|+.+++.+.+..... ...
T Consensus 36 paGl~~A~~La~----~G~~V~vlEr~~~~~----------~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~ 101 (549)
T 2r0c_A 36 PVGMALALDLAH----RQVGHLVVEQTDGTI----------THPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAA 101 (549)
T ss_dssp HHHHHHHHHHHH----TTCCEEEECSSCSCC----------SSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEE
T ss_pred HHHHHHHHHHHH----CCCCEEEEeCCCCCC----------CCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceE
Confidence 689999999999 499999999998773 3455899999999999999999999887653211 122
Q ss_pred EEe-CCCcceeEeecCCC-------CCccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCC
Q 013000 79 VWD-YTGLGYTKYNARDV-------NKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPS 150 (451)
Q Consensus 79 ~~~-~~~~~~~~~~~~~~-------~~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~ 150 (451)
++. ..+.....++.... ..+..++.++|..|+++|.+.+.+. |+++++|++++.
T Consensus 102 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~----v~~~~~v~~~~~-------------- 163 (549)
T 2r0c_A 102 WVTRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER----LRTRSRLDSFEQ-------------- 163 (549)
T ss_dssp EESSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG----EECSEEEEEEEE--------------
T ss_pred EeccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh----cccCcEEEEEEE--------------
Confidence 222 22322223322110 1223457899999999999999754 999999999987
Q ss_pred ccccccCCCeeEEEeCC---C--cEEEeeEEEeecCCCChhhhhhCCCCCCCcccCeEEEEEEeecCC------C-CeeE
Q 013000 151 ATTLFTKGHLAKLDLSD---G--TSLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKE------N-YCAW 218 (451)
Q Consensus 151 ~~~~~~~~~~v~v~~~d---g--~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~ 218 (451)
++++|+|++.+ | .+++||+||+|||.+|.||+++++......+...++.+.++.+.. . ...+
T Consensus 164 ------~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (549)
T 2r0c_A 164 ------RDDHVRATITDLRTGATRAVHARYLVACDGASSPTRKALGIDAPPRHRTQVFRNILFRAPELRSLLGERAALFF 237 (549)
T ss_dssp ------CSSCEEEEEEETTTCCEEEEEEEEEEECCCTTCHHHHHHTCCCCBSSCCEEEEEEEEECTTHHHHHGGGCCSEE
T ss_pred ------eCCEEEEEEEECCCCCEEEEEeCEEEECCCCCcHHHHHcCCCCCCCcccceEEEEEEECCchHHhcCCCCceEE
Confidence 44567888765 6 479999999999999999999998877666655566566665411 1 1222
Q ss_pred EEecCC-CcEEEeecCCCceEEEEEcCccchHHhhcCCHHHHHHHHHHhhccCCCCCCCCCCCCcccccccccCCccccc
Q 013000 219 QRFLPA-GPIALLPIGDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSA 297 (451)
Q Consensus 219 ~~~~~~-g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (451)
..+.++ ++++++|++++. .+.+.++... . ..+.+++.+.+...+...
T Consensus 238 ~~~~p~~~~~~~~p~~~~~-~~~~~~~~~~-~---~~~~~~~~~~l~~~~~~~--------------------------- 285 (549)
T 2r0c_A 238 FLMLSSSLRFPLRALDGRG-LYRLTVGVDD-A---SKSTMDSFELVRRAVAFD--------------------------- 285 (549)
T ss_dssp EEEEETTEEEEEEESSSSS-EEEEEEECST-T---CCSCCCHHHHHHHHBCSC---------------------------
T ss_pred EEECCCCcEEEEEEECCCc-EEEEEecCCC-C---CCCHHHHHHHHHHHhCCC---------------------------
Confidence 333566 678899987643 2333332111 1 134455666666544210
Q ss_pred ccccCCCcceeeecCcceeeecccccccccccCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhcCCCCChH
Q 013000 298 KECFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEA 377 (451)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~ 377 (451)
++.++. ....|++..+.+++|..|||+|+|||||.++|++|||+|+||+||.+|+++|...++.. ..+
T Consensus 286 -----~~~~~~----~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~---a~~ 353 (549)
T 2r0c_A 286 -----TEIEVL----SDSEWHLTHRVADSFSAGRVFLTGDAAHTLSPSGGFGMNTGIGSAADLGWKLAATLRGW---AGP 353 (549)
T ss_dssp -----CCCEEE----EEEEEEECCEECSCSEETTEEECGGGTEECCCGGGHHHHHHHHHHHHHHHHHHHHHHTC---SCT
T ss_pred -----CceeEE----EEecchhHhhhHHhhcCCcEEEEccccccCCCccCCccccccHHHHHHHHHHHHHHcCC---CCH
Confidence 100111 12247777777899999999999999999999999999999999999999999987643 236
Q ss_pred HHHHHHHHhhchhhHHHHHHHHHHHHhhcCC---------CchHHHHHHHHHHhhcc
Q 013000 378 SLLKKYEAERKPANIVMMAVLDGFQKAYSVD---------FGPLNILRAAAFHGAQY 425 (451)
Q Consensus 378 ~~l~~Ye~~r~~~~~~~~~~s~~~~~~~~~~---------~~~~~~~r~~~~~~~~~ 425 (451)
.+|+.|+++|++++..++..++.....+... ++....+|+.+...+..
T Consensus 354 ~lL~~Y~~eR~~~a~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~ 410 (549)
T 2r0c_A 354 GLLATYEEERRPVAITSLEEANVNLRRTMDRELPPGLHDDGPRGERIRAAVAEKLER 410 (549)
T ss_dssp TTTHHHHHHHHHHHHHHHHC----------CCCCTTTTCCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccCcchHHHHHHHHHHHHh
Confidence 7899999999999999999999888887542 55667888887777643
No 11
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=100.00 E-value=8.1e-37 Score=318.98 Aligned_cols=340 Identities=19% Similarity=0.271 Sum_probs=238.8
Q ss_pred CcHHHHHHHhcC-CCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHHHHHHCCCchhhhhhhcccccEEEE
Q 013000 1 MVGMALACSLAS-MPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQV 79 (451)
Q Consensus 1 paGl~lA~~L~~-~~~~~g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~~~~~~~~~~~~~~~~~ 79 (451)
|+||++|+.|++ + |++|+||||.+.+. ..++++.++++++++|+++|+.+++...+. ....+.+
T Consensus 42 paGL~~A~~La~~~----G~~V~viEr~~~~~----------~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~-~~~~~~~ 106 (639)
T 2dkh_A 42 PAGLTLAAQLAAFP----DIRTCIVEQKEGPM----------ELGQADGIACRTMEMFEAFEFADSILKEAC-WINDVTF 106 (639)
T ss_dssp HHHHHHHHHHTTCT----TSCEEEECSSSSCC----------SSCSCCEECHHHHHHHHHTTCHHHHHHHSE-EECEEEE
T ss_pred HHHHHHHHHHHHhC----CCCEEEEeCCCCCC----------CCCceeeeCHHHHHHHHHcCcHHHHHHhcc-cccceEE
Confidence 689999999999 7 99999999998873 345599999999999999999999988766 4566677
Q ss_pred EeCC----Cccee--EeecCC-CCCccceeeechHHHHHHHHHHhhcCC-CceEEcCCeeEEEEeCCCCCCcccCCCCCc
Q 013000 80 WDYT----GLGYT--KYNARD-VNKEILGCVVENKVLHSSLLSCMQNTE-FQKTIYPSRLTSMALLPSSSSISVDSTPSA 151 (451)
Q Consensus 80 ~~~~----~~~~~--~~~~~~-~~~~~~~~~i~R~~L~~~L~~~~~~~g-~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~ 151 (451)
|+.+ +.... .++... .......+.++|..|+++|.+.+.+.| +++|+++++|++++.+ .++
T Consensus 107 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~---------~~~-- 175 (639)
T 2dkh_A 107 WKPDPGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVD---------HGA-- 175 (639)
T ss_dssp EEECTTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEEC---------TTC--
T ss_pred ECCCCCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEEC---------CCC--
Confidence 7642 21111 122111 112334578999999999999999987 4599999999999761 100
Q ss_pred cccccCCCeeEEEeC------CC--cEEEeeEEEeecCCCChhhhhhCCCCCCCcccCeEEEEEEee--cCCC-CeeEEE
Q 013000 152 TTLFTKGHLAKLDLS------DG--TSLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEH--NKEN-YCAWQR 220 (451)
Q Consensus 152 ~~~~~~~~~v~v~~~------dg--~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~ 220 (451)
.+..|+|++. +| ++++||+||||||.+|.||++++.......+...+....+.. +.+. ......
T Consensus 176 -----~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~ 250 (639)
T 2dkh_A 176 -----ADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAWGVMDVLAVTDFPDVRYKVAI 250 (639)
T ss_dssp -----SSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCEEEEEEEEEECCTTTTSEEEE
T ss_pred -----CcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceEEEEEEEEccCCCccceeEEE
Confidence 1235777765 46 479999999999999999999998766555444433333221 2222 111211
Q ss_pred ecCCCcEEEeecCCC-ceEEEEEcCcc--c-hHHhhcCCHHHHHHHHHHhhccCCCCCCCCCCCCcccccccccCCcccc
Q 013000 221 FLPAGPIALLPIGDN-FSNIVWTMNPK--D-ASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLS 296 (451)
Q Consensus 221 ~~~~g~~~~~p~~~~-~~~~~~~~~~~--~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (451)
..++|+++++|.+++ ..++++..+.. . .......+.+++.+.+...+. .+.
T Consensus 251 ~~~~g~~~~~P~~~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~-~~~------------------------ 305 (639)
T 2dkh_A 251 QSEQGNVLIIPREGGHLVRFYVEMDKLDADERVASRNITVEQLIATAQRVLH-PYK------------------------ 305 (639)
T ss_dssp EETTEEEEEEECTTSSCEEEEEECC-----------CCCHHHHHHHHHHHHT-TSC------------------------
T ss_pred EcCCceEEEEEcCCCcEEEEEEECCCcCcccccccCCCCHHHHHHHHHHHhC-ccc------------------------
Confidence 227889999999887 67777776541 1 112234567777777766442 000
Q ss_pred cccccCCCcceeeecCcceeeecccccccccc------------cCCEEEEcccccccCCcchhccccchHHHHHHHHHH
Q 013000 297 AKECFEVPPRVVKLASERMVFPLSLKHANNYV------------SKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRII 364 (451)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L 364 (451)
..+ ....+...|++..+.+++|. .|||+|+|||||.++|++|||+|+||+||.+|+++|
T Consensus 306 --------~~~-~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkL 376 (639)
T 2dkh_A 306 --------LEV-KNVPWWSVYEIGQRICAKYDDVVDAVATPDSPLPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKL 376 (639)
T ss_dssp --------EEE-EEEEEEEEECCCCEECSCSBSCCCSSCCTTSCCCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHH
T ss_pred --------Ccc-eeeeEEEecccccchhhhhhccccccccccCccCcEEEEecccccCCCcccccchhhHHHHHHHHHHH
Confidence 000 11112223555556667776 899999999999999999999999999999999999
Q ss_pred HHhhhcCCCCChHHHHHHHHHhhchhhHHHHHHHHHHHHhhcCC
Q 013000 365 AEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQKAYSVD 408 (451)
Q Consensus 365 ~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~~~~~s~~~~~~~~~~ 408 (451)
...++.. ..+.+|+.|+++|++++..++..++.+..+++..
T Consensus 377 a~vl~g~---a~~~lL~~Ye~eR~~~a~~~~~~s~~~~~~~~~~ 417 (639)
T 2dkh_A 377 AAVLRKQ---CAPELLHTYSSERQVVAQQLIDFDREWAKMFSDP 417 (639)
T ss_dssp HHHHTTS---BCGGGGHHHHHHHHHHHHHHHHHHHHSCC-----
T ss_pred HHHHcCC---CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9987632 3368899999999999999999999988887654
No 12
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=100.00 E-value=7.6e-37 Score=302.44 Aligned_cols=324 Identities=20% Similarity=0.201 Sum_probs=227.1
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHHHHHHCCCchhhhhhhcccccEEEEE
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVW 80 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~~~~~~~~~~~~~~~~~~ 80 (451)
|+||++|+.|++ +|++|+||||.+.+. ...++|+.++++++++|+++|+.+ ..... +...+.++
T Consensus 15 ~aGl~~A~~L~~----~G~~v~v~E~~~~~~---------~~~~~g~~l~~~~~~~l~~~g~~~--~~~~~-~~~~~~~~ 78 (397)
T 2vou_A 15 ISGLTAALMLRD----AGVDVDVYERSPQPL---------SGFGTGIVVQPELVHYLLEQGVEL--DSISV-PSSSMEYV 78 (397)
T ss_dssp HHHHHHHHHHHH----TTCEEEEECSSSSSC---------CCCSCEEECCHHHHHHHHHTTCCG--GGTCB-CCCEEEEE
T ss_pred HHHHHHHHHHHh----CCCCEEEEecCCCCC---------CccccccccChhHHHHHHHcCCcc--ccccc-cccceEEE
Confidence 689999999999 499999999998651 223458999999999999999987 33333 55667777
Q ss_pred eC-CCcceeEeecCCCCCccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCC
Q 013000 81 DY-TGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGH 159 (451)
Q Consensus 81 ~~-~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (451)
+. .+.....++. + ...++|..|.+.|.+.+. +++|+++++|++++. .++
T Consensus 79 ~~~~g~~~~~~~~-----~--~~~~~~~~l~~~L~~~~~---~~~i~~~~~v~~i~~--------------------~~~ 128 (397)
T 2vou_A 79 DALTGERVGSVPA-----D--WRFTSYDSIYGGLYELFG---PERYHTSKCLVGLSQ--------------------DSE 128 (397)
T ss_dssp ETTTCCEEEEEEC-----C--CCEEEHHHHHHHHHHHHC---STTEETTCCEEEEEE--------------------CSS
T ss_pred ecCCCCccccccC-----c--ccccCHHHHHHHHHHhCC---CcEEEcCCEEEEEEe--------------------cCC
Confidence 76 5543333321 1 134788999999999873 489999999999976 446
Q ss_pred eeEEEeCCCcEEEeeEEEeecCCCChhhhhhCCCCCCCcccCeEEEEEEeecCCC--------CeeEEEecCCCcEEEee
Q 013000 160 LAKLDLSDGTSLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKEN--------YCAWQRFLPAGPIALLP 231 (451)
Q Consensus 160 ~v~v~~~dg~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~g~~~~~p 231 (451)
.+.|++.||+++.+|+||+|||.+|.||+.++ +......+..++.+.+...... ......+.+++++.++|
T Consensus 129 ~v~v~~~~g~~~~ad~vV~AdG~~S~vr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (397)
T 2vou_A 129 TVQMRFSDGTKAEANWVIGADGGASVVRKRLL-GIEPTYAGYVTWRGVLQPGEVADDVWNYFNDKFTYGLLDDGHLIAYP 207 (397)
T ss_dssp CEEEEETTSCEEEESEEEECCCTTCHHHHHHH-CCCCEEEEEEEEEEEECTTSSCHHHHHHHTTEEEEEEETTEEEEEEE
T ss_pred EEEEEECCCCEEECCEEEECCCcchhHHHHhc-cCCCCccceEEEEEEeeccccChhhhhhhcCceeEEecCCCEEEEEE
Confidence 68999999999999999999999999999998 5433222334445555422111 12223345677788888
Q ss_pred cCCC------ceEEEEEcCccchHHhhc------------------CCHHHHHHHHHHhhccCCCCCCCCCCCCcccccc
Q 013000 232 IGDN------FSNIVWTMNPKDASDCKS------------------MNEDDFVKILNHALDYGYGPHPKSISSGSVDMFS 287 (451)
Q Consensus 232 ~~~~------~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 287 (451)
++++ ..+++|+.+......... ...+. .+.+.+.+...|++ +.
T Consensus 208 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~------------~~ 274 (397)
T 2vou_A 208 IPGRENAESPRLNFQWYWNVAEGPDLDELMTDVRGIRLPTSVHNNSLNPHN-LRQFHSKGESLFKP------------FR 274 (397)
T ss_dssp ECCSSTTSCCEEEEEEEEECCTTHHHHHHTBCTTSCBCSSEECGGGCCHHH-HHHHHHHHTTSCHH------------HH
T ss_pred CCCCCCccceeEEEEEEecCCCccchhhhccCCCCcccccccCcccCCHHH-HHHHHHHHHhhChH------------HH
Confidence 8753 556778765433111100 02222 22332222101110 00
Q ss_pred cccCCcccccccccCCCcceeeecCcceeeecccccccccccCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHh
Q 013000 288 WFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEG 367 (451)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~ 367 (451)
. ++........+++....+++|..|||+|||||||.|+|+.|||+|+||+||..|+++|..
T Consensus 275 ~------------------~~~~~~~~~~~~~~~~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~- 335 (397)
T 2vou_A 275 D------------------LVLNASSPFVTVVADATVDRMVHGRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTK- 335 (397)
T ss_dssp H------------------HHHHCSSCEEEEEEEBCCSCSEETTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHH-
T ss_pred H------------------HHhccCCcceeeeeeecCCceecCcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhc-
Confidence 0 011111122456666667889999999999999999999999999999999999999974
Q ss_pred hhcCCCCChHHHHHHHHHhhchhhHHHHHHHHHHHHhhcCC
Q 013000 368 IAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQKAYSVD 408 (451)
Q Consensus 368 ~~~~~~~~~~~~l~~Ye~~r~~~~~~~~~~s~~~~~~~~~~ 408 (451)
..+ .+.+|+.|+++|++++..++..++.+...++..
T Consensus 336 ---~~~--~~~~L~~Ye~~R~~~~~~~~~~s~~~~~~~~~~ 371 (397)
T 2vou_A 336 ---NHD--LRGSLQSWETRQLQQGHAYLNKVKKMASRLQHG 371 (397)
T ss_dssp ---CSC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred ---CCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 122 478999999999999999999999999998765
No 13
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=100.00 E-value=2.3e-36 Score=297.21 Aligned_cols=313 Identities=19% Similarity=0.194 Sum_probs=223.2
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHHHHHHCCCchhhhhhhcccccEEEEE
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVW 80 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~~~~~~~~~~~~~~~~~~ 80 (451)
|+||++|+.|++ +|++|+||||.+.++..+ +++.++++++++|+++|+.+++...+. ....+.++
T Consensus 21 ~aGl~~A~~L~~----~G~~v~viE~~~~~~~~~----------~~~~l~~~~~~~l~~~g~~~~~~~~~~-~~~~~~~~ 85 (379)
T 3alj_A 21 FAGLTAAIALKQ----NGWDVRLHEKSSELRAFG----------AGIYLWHNGLRVLEGLGALDDVLQGSH-TPPTYETW 85 (379)
T ss_dssp HHHHHHHHHHHH----TTCEEEEECSSSSCCCCS----------SEEEEEHHHHHHHHHTTCHHHHHTTCB-CCSCEEEE
T ss_pred HHHHHHHHHHHH----CCCCEEEEecCCCCCCCC----------ceEEeCccHHHHHHHcCCHHHHHhhCC-CccceEEE
Confidence 589999999999 499999999998874444 499999999999999999999887665 56677777
Q ss_pred eCCCcceeEeecCCCCCccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCe
Q 013000 81 DYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL 160 (451)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (451)
+. +.....++.. ....+.++|..|.+.|.+.+.+.+ ++|+++++|++++. .+
T Consensus 86 ~~-g~~~~~~~~~----~~~~~~~~r~~l~~~L~~~~~~~g-v~i~~~~~v~~i~~----------------------~~ 137 (379)
T 3alj_A 86 MH-NKSVSKETFN----GLPWRIMTRSHLHDALVNRARALG-VDISVNSEAVAADP----------------------VG 137 (379)
T ss_dssp ET-TEEEEEECGG----GCCEEEEEHHHHHHHHHHHHHHTT-CEEESSCCEEEEET----------------------TT
T ss_pred eC-CceeeeccCC----CCceEEECHHHHHHHHHHHHHhcC-CEEEeCCEEEEEEe----------------------CC
Confidence 76 5443344321 223588999999999999999886 99999999999953 22
Q ss_pred eEEEeCCCcEEEeeEEEeecCCCChhhhhhCCCCCCCcccCeEEEEEEeec-----CC-CCeeEE---EecCCCcEEEee
Q 013000 161 AKLDLSDGTSLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHN-----KE-NYCAWQ---RFLPAGPIALLP 231 (451)
Q Consensus 161 v~v~~~dg~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~---~~~~~g~~~~~p 231 (451)
.|++.||+++.+|+||+|||.+|.+|+.++........+..++.+.++.. .. ...... .+.++++++++|
T Consensus 138 -~v~~~~g~~~~ad~vV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 216 (379)
T 3alj_A 138 -RLTLQTGEVLEADLIVGADGVGSKVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSP 216 (379)
T ss_dssp -EEEETTSCEEECSEEEECCCTTCHHHHHHCCCEEEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECCSSSCCEEEEEE
T ss_pred -EEEECCCCEEEcCEEEECCCccHHHHHHhcCCCCcCcCCcEEEEEEechhhccCCcCCcccccccceEECCCCEEEEEE
Confidence 78888999999999999999999999999875433333444555555542 11 122333 467889999999
Q ss_pred cCCCceEEEEEcCccchHHhhcCCHHHHHHHHHHhhccCCCCCCCCCCCCcccccccccCCcccccccccCCCcceeeec
Q 013000 232 IGDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLA 311 (451)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (451)
++++...+++..+..... ++.+.+.+..... ... ...++++. . ..
T Consensus 217 ~~~~~~~~~~~~~~~~~~------~~~l~~~~~~~~~-~~~--------~~~~~l~~----~----------------~~ 261 (379)
T 3alj_A 217 CNENELYLGLMAPAADPR------GSSVPIDLEVWVE-MFP--------FLEPCLIE----A----------------AK 261 (379)
T ss_dssp CSSSEEEEEEEECTTCTT------TTCSSCCHHHHHH-HCG--------GGHHHHHH----H----------------HT
T ss_pred CCCCcEEEEEEecCCCCC------HHHHHHHHhcCCc-hhc--------cHHHHHhh----C----------------Cc
Confidence 999877776665431100 0000000000000 000 00000000 0 00
Q ss_pred Ccceeeeccc-ccccccccCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchh
Q 013000 312 SERMVFPLSL-KHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPA 390 (451)
Q Consensus 312 ~~~~~~~~~~-~~~~~~~~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~ 390 (451)
.....|++.. ..+++|..|||+|||||||.++|++|||+|+||+||..|+++|... .+ .+.+|+.|+++|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~----~~--~~~~l~~Y~~~r~~~ 335 (379)
T 3alj_A 262 LKTARYDKYETTKLDSWTRGKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLEEG----SS--VEDALVAWETRIRPI 335 (379)
T ss_dssp CTTCCEEEEEEEEESCSEETTEEECTHHHHCCCGGGSCHHHHHHHHHHHHHHHTTSS----SC--HHHHHHHHHHHHHHH
T ss_pred cceEEecccccCCCCCcccCcEEEEEcccCCCCcchhhhHHHHHHHHHHHHHHhccc----cC--HHHHHHHHHHHHHHH
Confidence 1112244444 2367899999999999999999999999999999999999999652 12 378999999999999
Q ss_pred hHHHHHHH
Q 013000 391 NIVMMAVL 398 (451)
Q Consensus 391 ~~~~~~~s 398 (451)
+..++..+
T Consensus 336 ~~~~~~~s 343 (379)
T 3alj_A 336 TDRCQALS 343 (379)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999887
No 14
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=100.00 E-value=2.4e-35 Score=292.97 Aligned_cols=326 Identities=17% Similarity=0.167 Sum_probs=222.8
Q ss_pred CcHHHHHHHhcCCCCCCCcE-EEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHHHHHHCCCchhhhhhhcccccEEEE
Q 013000 1 MVGMALACSLASMPLTKHLS-VAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQV 79 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~-V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~~~~~~~~~~~~~~~~~ 79 (451)
|+||++|+.|++ +|++ |+||||.+.++.. ++|+.++++++++|+++|+++.+...+. +...+.+
T Consensus 14 ~aGl~~A~~L~~----~G~~~v~v~E~~~~~~~~----------g~g~~l~~~~~~~l~~lg~~~~l~~~~~-~~~~~~~ 78 (410)
T 3c96_A 14 IGGLSCALALHQ----AGIGKVTLLESSSEIRPL----------GVGINIQPAAVEALAELGLGPALAATAI-PTHELRY 78 (410)
T ss_dssp HHHHHHHHHHHH----TTCSEEEEEESSSSCCCC----------SCEEEECHHHHHHHHHTTCHHHHHHHSE-EECEEEE
T ss_pred HHHHHHHHHHHh----CCCCeEEEEECCCCcccc----------eeEEEEChHHHHHHHHCCChHHHHhhCC-CcceEEE
Confidence 689999999999 4999 9999999887433 4499999999999999999999988765 5566777
Q ss_pred EeCCCcceeEeecCC-CCCccceeeechHHHHHHHHHHhhcC-CCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccC
Q 013000 80 WDYTGLGYTKYNARD-VNKEILGCVVENKVLHSSLLSCMQNT-EFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTK 157 (451)
Q Consensus 80 ~~~~~~~~~~~~~~~-~~~~~~~~~i~R~~L~~~L~~~~~~~-g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (451)
++..+......+... .......+.++|..|.+.|.+.+.+. +.++|+++++|++++.
T Consensus 79 ~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~--------------------- 137 (410)
T 3c96_A 79 IDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE--------------------- 137 (410)
T ss_dssp ECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE---------------------
T ss_pred EcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec---------------------
Confidence 776654443332110 11222357899999999999999863 5468999999999953
Q ss_pred CCeeEEEeCC---C--cEEEeeEEEeecCCCChhhhhhCCCCCCCcccC-eEEEEEEeecCC-CCeeEEEec--CCCcEE
Q 013000 158 GHLAKLDLSD---G--TSLYAKLVVGADGGKSRVRELAGFKTTGWSYSQ-NAIICTVEHNKE-NYCAWQRFL--PAGPIA 228 (451)
Q Consensus 158 ~~~v~v~~~d---g--~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~--~~g~~~ 228 (451)
++++.|++.+ | .++.||+||+|||.+|.||+++++......+.. ..+...+..... .......++ ++++++
T Consensus 138 ~~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (410)
T 3c96_A 138 RDGRVLIGARDGHGKPQALGADVLVGADGIHSAVRAHLHPDQRPLSHGGITMWRGVTEFDRFLDGKTMIVANDEHWSRLV 217 (410)
T ss_dssp ETTEEEEEEEETTSCEEEEEESEEEECCCTTCHHHHHHCTTCCCCEEEEEEEEEEEEEESCCTTSSEEEEEECTTCCEEE
T ss_pred CCccEEEEecCCCCCceEEecCEEEECCCccchhHHHhcCCCCCCCcCCeeEEEeecccccccCCCeEEEecCCCCcEEE
Confidence 2347787765 7 479999999999999999999976543333322 223333333221 122233344 367889
Q ss_pred EeecCC-----CceEEEEEcCccchHH---------hhcCCHHHHHHHHHHhhccCCCCCCCCCCCCcccccccccCCcc
Q 013000 229 LLPIGD-----NFSNIVWTMNPKDASD---------CKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDAT 294 (451)
Q Consensus 229 ~~p~~~-----~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (451)
++|+.+ +...+.|.+....... ......+++.+.+ . +|..... .+.
T Consensus 218 ~~p~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~-~~~~~~~--------~~~------- 277 (410)
T 3c96_A 218 AYPISARHAAEGKSLVNWVCMVPSAAVGQLDNEADWNRDGRLEDVLPFF----A-DWDLGWF--------DIR------- 277 (410)
T ss_dssp EEECCHHHHTTTCEEEEEEEEEEHHHHCCCCSSCCTTCBCCHHHHHHHH----T-TCCBTTB--------CHH-------
T ss_pred EEecCCcccCCCCcEEEEEEEecCcccccCCCccccCCCCCHHHHHHHh----c-CCCCchh--------HHH-------
Confidence 999863 4556666554322110 0011223333322 2 2211000 000
Q ss_pred cccccccCCCcceeeecCcceeeecccc-cccccccCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhcCCC
Q 013000 295 LSAKECFEVPPRVVKLASERMVFPLSLK-HANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGAD 373 (451)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~ 373 (451)
.++........|++... .+++|..|||+|||||||.|+|++|||+|+||+||..|+++|... .
T Consensus 278 -----------~~i~~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~----~- 341 (410)
T 3c96_A 278 -----------DLLTRNQLILQYPMVDRDPLPHWGRGRITLLGDAAHLMYPMGANGASQAILDGIELAAALARN----A- 341 (410)
T ss_dssp -----------HHHHTCSEEEEEEEEECCCCSCCCBTTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHHC----S-
T ss_pred -----------HHHhcCcccceeecccCCCccccccCCEEEEecccCCCCCccchhHHHHHHHHHHHHHHHhcc----C-
Confidence 01111112223554443 357899999999999999999999999999999999999999863 1
Q ss_pred CChHHHHHHHHHhhchhhHHHHHHHH
Q 013000 374 IGEASLLKKYEAERKPANIVMMAVLD 399 (451)
Q Consensus 374 ~~~~~~l~~Ye~~r~~~~~~~~~~s~ 399 (451)
..+.+|+.|+++|++++..++..++
T Consensus 342 -~~~~~L~~Ye~~r~~~~~~~~~~s~ 366 (410)
T 3c96_A 342 -DVAAALREYEEARRPTANKIILANR 366 (410)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 3488999999999999999998887
No 15
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=100.00 E-value=9.4e-35 Score=287.49 Aligned_cols=339 Identities=18% Similarity=0.174 Sum_probs=225.1
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecH-HHHHHHHHCCCchhhhhhhcccccEEEE
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTP-ATISFFKEIGAWQYVQQHRHAYFDKMQV 79 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~-~~~~~L~~lgl~~~~~~~~~~~~~~~~~ 79 (451)
|+||++|+.|++ +|++|+||||++.+.. ...+.++.+++ ++.++|+++|+++++..... +... .+
T Consensus 36 ~aGl~~A~~L~~----~G~~v~v~E~~~~~~~--------~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~-~~~~-~~ 101 (398)
T 2xdo_A 36 PVGLTMAKLLQQ----NGIDVSVYERDNDREA--------RIFGGTLDLHKGSGQEAMKKAGLLQTYYDLAL-PMGV-NI 101 (398)
T ss_dssp HHHHHHHHHHHT----TTCEEEEEECSSSTTC--------CCCSCCEECCTTTHHHHHHHTTCHHHHHHHCB-CCCE-EE
T ss_pred HHHHHHHHHHHH----CCCCEEEEeCCCCccc--------cccCCeeeeCCccHHHHHHhcChHHHHHHhhc-ccce-EE
Confidence 689999999999 4999999999987622 12344666765 56899999999999987665 3334 66
Q ss_pred EeCCCcceeEeecCCCCCccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCC
Q 013000 80 WDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGH 159 (451)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (451)
++.++.....+..... .......++|..|.+.|.+.+.+ ++|+++++|++++. .++
T Consensus 102 ~~~~g~~~~~~~~~~~-~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v~~i~~--------------------~~~ 157 (398)
T 2xdo_A 102 ADEKGNILSTKNVKPE-NRFDNPEINRNDLRAILLNSLEN---DTVIWDRKLVMLEP--------------------GKK 157 (398)
T ss_dssp ECSSSEEEEECCCGGG-TTSSCCEECHHHHHHHHHHTSCT---TSEEESCCEEEEEE--------------------CSS
T ss_pred ECCCCCchhhcccccc-CCCCCceECHHHHHHHHHhhcCC---CEEEECCEEEEEEE--------------------CCC
Confidence 6665544333200110 11122469999999999998863 58999999999976 345
Q ss_pred eeEEEeCCCcEEEeeEEEeecCCCChhhhhhCCCCCCCcccCeEEEEEEeecC---C------CCeeEEEecCCCcEEEe
Q 013000 160 LAKLDLSDGTSLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNK---E------NYCAWQRFLPAGPIALL 230 (451)
Q Consensus 160 ~v~v~~~dg~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~---~------~~~~~~~~~~~g~~~~~ 230 (451)
.++|++.||+++.+|+||+|||.+|.||++++... ....+..++...+.... + ....+..+.++..++++
T Consensus 158 ~v~v~~~~g~~~~ad~vV~AdG~~S~vR~~l~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 236 (398)
T 2xdo_A 158 KWTLTFENKPSETADLVILANGGMSKVRKFVTDTE-VEETGTFNIQADIHQPEINCPGFFQLCNGNRLMASHQGNLLFAN 236 (398)
T ss_dssp SEEEEETTSCCEEESEEEECSCTTCSCCTTTCCCC-CEEEEEEEEEEEESSHHHHSHHHHHHHTTSEEEEEETTEEEEEE
T ss_pred EEEEEECCCcEEecCEEEECCCcchhHHhhccCCC-ceEcceEEEEEEeCchhccCchhHhhcCCceEEEecCCCeEEEE
Confidence 68899999999999999999999999999986432 11223344444443210 1 01122334566667777
Q ss_pred ecCCCceEEEEEcCccch-HH---hhcCCHHHHHHHHHHhhccCCCCCCCCCCCCcccccccccCCcccccccccCCCcc
Q 013000 231 PIGDNFSNIVWTMNPKDA-SD---CKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPR 306 (451)
Q Consensus 231 p~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (451)
|.+++..++++....... .. ....+.+.+.+.+...+. .|.+. ..+.+..
T Consensus 237 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~-------~~~~~~~------------------ 290 (398)
T 2xdo_A 237 PNNNGALHFGISFKTPDEWKNQTQVDFQNRNSVVDFLLKEFS-DWDER-------YKELIHT------------------ 290 (398)
T ss_dssp EEETTEEEEEEEEECCTTC---CCSCTTCHHHHHHHHHHHTT-TSCHH-------HHHHHHH------------------
T ss_pred eCCCCcEEEEEEEecCcccccccccCcCCHHHHHHHHHHHHc-CCChH-------HHHHHhC------------------
Confidence 888877777665532221 11 011355667777776554 23211 0011110
Q ss_pred eeeecCcceeeeccccc-cccccc-C--CEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhcCCCCChHHHHHH
Q 013000 307 VVKLASERMVFPLSLKH-ANNYVS-K--RVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKK 382 (451)
Q Consensus 307 ~~~~~~~~~~~~~~~~~-~~~~~~-g--~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~ 382 (451)
......+++.... ...|.. + ||+|+|||||.|+|++|||+|+||+||..|+++|... ..+. .+.+|+.
T Consensus 291 ----~~~~~~~~~~~~~~~~~~~~~~~~rv~LiGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~---~~~~-~~~~L~~ 362 (398)
T 2xdo_A 291 ----TLSFVGLATRIFPLEKPWKSKRPLPITMIGDAAHLMPPFAGQGVNSGLVDALILSDNLADG---KFNS-IEEAVKN 362 (398)
T ss_dssp ----CSCCEEEEEEECCCCSCCCSCCSSCEEECTHHHHCCCCTTSCSHHHHHHHHHHHHHHHHSC---CSSS-HHHHHHH
T ss_pred ----cccceeeeeEeccCCCCcccCCCccEEEEeehhccCCCccCccHHHHHHHHHHHHHHHHhc---cCch-HHHHHHH
Confidence 0111112322222 246764 5 8999999999999999999999999999999999874 1221 4789999
Q ss_pred HHHhhchhhHHHHHHHHHHHHh-hcCCCchH
Q 013000 383 YEAERKPANIVMMAVLDGFQKA-YSVDFGPL 412 (451)
Q Consensus 383 Ye~~r~~~~~~~~~~s~~~~~~-~~~~~~~~ 412 (451)
|+++|++++..++..+...... +....++.
T Consensus 363 Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~ 393 (398)
T 2xdo_A 363 YEQQMFIYGKEAQEESTQNEIEMFKPDFTFQ 393 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTCCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCcccc
Confidence 9999999999999988877754 55554443
No 16
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=100.00 E-value=7.8e-34 Score=289.62 Aligned_cols=376 Identities=13% Similarity=0.094 Sum_probs=253.8
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHH-HHHHCCCchhhhhhhcccccEEEE
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATIS-FFKEIGAWQYVQQHRHAYFDKMQV 79 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~-~L~~lgl~~~~~~~~~~~~~~~~~ 79 (451)
|+||++|+.|++ +|++|+||||.+.++ ...|..+.++... +|+.+|+.+.+...+........+
T Consensus 17 ~aGl~aA~~La~----~G~~V~liE~~~~~~-----------~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~ 81 (512)
T 3e1t_A 17 PGGSTLASFVAM----RGHRVLLLEREAFPR-----------HQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTF 81 (512)
T ss_dssp HHHHHHHHHHHT----TTCCEEEECSSCSSC-----------CCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEE
T ss_pred HHHHHHHHHHHh----CCCCEEEEccCCCCC-----------CCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceE
Confidence 589999999999 599999999998662 2236778888665 899999999988776633333333
Q ss_pred EeCCCcce--eEeecCCCCCccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccC
Q 013000 80 WDYTGLGY--TKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTK 157 (451)
Q Consensus 80 ~~~~~~~~--~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (451)
........ ..+..........++.++|..|.+.|.+.+.+.| ++|+++++|++++. .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~G-v~i~~~~~V~~v~~--------------------~ 140 (512)
T 3e1t_A 82 RWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKG-VDVRERHEVIDVLF--------------------E 140 (512)
T ss_dssp ECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTT-CEEESSCEEEEEEE--------------------E
T ss_pred EecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCC-CEEEcCCEEEEEEE--------------------E
Confidence 22222222 2232222234456789999999999999999876 99999999999976 2
Q ss_pred CC---eeEEEeCCCc--EEEeeEEEeecCCCChhhhhhCCCCCCCcccCeEEEEEEeec----CCC-CeeEEEecCCCcE
Q 013000 158 GH---LAKLDLSDGT--SLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHN----KEN-YCAWQRFLPAGPI 227 (451)
Q Consensus 158 ~~---~v~v~~~dg~--~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~g~~ 227 (451)
++ +|.+...||+ ++.||+||+|||.+|.+|++++.......+...++.+.+... .+. ...+..+.+.|++
T Consensus 141 ~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 220 (512)
T 3e1t_A 141 GERAVGVRYRNTEGVELMAHARFIVDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLPAPRQGNILSAAFQDGWF 220 (512)
T ss_dssp TTEEEEEEEECSSSCEEEEEEEEEEECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCCCCSTTCTTSEEEEEETTEEE
T ss_pred CCEEEEEEEEeCCCCEEEEEcCEEEECCCcchHHHHHcCCCccCchhcceEEEEEecCCccCCCCCcCceEEEEeCCceE
Confidence 33 3566667785 899999999999999999999765444445556666666532 222 3445566789999
Q ss_pred EEeecCCCceEEEEEcCccchHHhhcCCHHHHHHHHHHhhccCCCCCCCCCCCCcccccccccCCcccccccccCCCcce
Q 013000 228 ALLPIGDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRV 307 (451)
Q Consensus 228 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (451)
|++|+.++...++|..+....... ....++.+..+....+ ...+.+...... ....
T Consensus 221 ~~~Pl~~~~~~vg~~~~~~~~~~~-~~~~~~~~~~~l~~~p---------------~~~~~l~~~~~~-----~~~~--- 276 (512)
T 3e1t_A 221 WYIPLSDTLTSVGAVVSREAAEAI-KDGHEAALLRYIDRCP---------------IIKEYLAPATRV-----TTGD--- 276 (512)
T ss_dssp EEEECSSSEEEEEEEEEHHHHTTT-SSCHHHHHHHHHHTSH---------------HHHHHHTTCEEC-----CSST---
T ss_pred EEEEeCCCeEEEEEEecHHHhhhh-cCCHHHHHHHHHHhCc---------------hHHHHHhcCccc-----cccc---
Confidence 999999988888888765433221 1233444333332111 000110000000 0000
Q ss_pred eeecCcceeeecccccccccccCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhh
Q 013000 308 VKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAER 387 (451)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r 387 (451)
.......+......++|..+||+|||||||.++|+.|||+|+||+||..|+++|...+... ...+.+|+.|++.|
T Consensus 277 ---~~~i~~~~~~~~~~~~~~~~~vvlvGDAAh~~~P~~GqG~~~Al~dA~~La~~L~~~l~~~--~~~~~aL~~Ye~~~ 351 (512)
T 3e1t_A 277 ---YGEIRIRKDYSYCNTSFWKNGMALVGDAACFVDPVFSSGVHLATYSALLVARAINTCLAGE--MSEQRCFEEFERRY 351 (512)
T ss_dssp ---TSSCEEEESCCEEESCSBCSSEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHTTTC--SCHHHHHHHHHHHH
T ss_pred ---cccceeeccccccccccccCCEEEEechhhcCCCccccCHHHHHHHHHHHHHHHHHHHcCC--ccHHHHHHHHHHHH
Confidence 0000001111113467778999999999999999999999999999999999999887643 34478999999999
Q ss_pred chhhHHHHHHHHHHHHhhcCCCchHHHHHHHHHHhhccChhHHHHHHHHhhCCCCCCC
Q 013000 388 KPANIVMMAVLDGFQKAYSVDFGPLNILRAAAFHGAQYISPLKRNIISYASGEQRLPL 445 (451)
Q Consensus 388 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~r~~~~~~~~~~p~l~~~~~~~~~g~~~~~~ 445 (451)
++++..+......++......+.+. |. ..+.+...+....+++..+.|....-.
T Consensus 352 ~~~~~~~~~~~~~~y~~~~r~ds~f-W~---~~~~~~~~~~~~~~f~~~~~g~~~~~~ 405 (512)
T 3e1t_A 352 RREYGNFYQFLVAFYDMNQDTDSYF-WS---ARKIINTEERANEAFVRLIAGRSNLDE 405 (512)
T ss_dssp HHHHHHHHHHHHHHHHHCCCTTCHH-HH---TSSCCCSHHHHHHHHHHHHTTCCCTTC
T ss_pred HHHHHHHHHHHHHHHhhhcCCCCHH-HH---HHhhhccCcHHHHHHHHHHcCCCChHh
Confidence 9999999999888888765443221 21 112233467788888888888776543
No 17
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=100.00 E-value=1.5e-32 Score=270.97 Aligned_cols=329 Identities=15% Similarity=0.135 Sum_probs=215.8
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHHHHHHCCCchhhhhhhcccccEEEEE
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVW 80 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~~~~~~~~~~~~~~~~~~ 80 (451)
||||++|+.|++ +|++|+||||++.+... ...|..|++. +|+.+|+..+...... .+.+..++
T Consensus 14 paGl~~A~~La~----~G~~V~v~Er~~~~~~~---------~~~g~~l~~~---~l~~l~~~~~~~~~~~-~~~~~~~~ 76 (397)
T 3oz2_A 14 PGGSTAARYAAK----YGLKTLMIEKRPEIGSP---------VRCGEGLSKG---ILNEADIKADRSFIAN-EVKGARIY 76 (397)
T ss_dssp HHHHHHHHHHHH----TTCCEEEECSSSSTTCS---------CCSCCEEETH---HHHHTTCCCCTTTEEE-EESEEEEE
T ss_pred HHHHHHHHHHHH----CCCcEEEEeCCCCCCCC---------CceecccCHH---HHHHcCCCchhhhhhc-ccceEEEE
Confidence 799999999999 49999999999876321 2226667664 5677776544333222 45677777
Q ss_pred eCCCcceeEeecCCCCCccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCe
Q 013000 81 DYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL 160 (451)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (451)
...+.....+... ......++.++|..|++.|.+.+.+.| ++++++++|+++.. +++..
T Consensus 77 ~~~~~~~~~~~~~-~~~~~~~~~i~R~~~~~~L~~~a~~~G-~~~~~~~~v~~~~~-------------------~~~~~ 135 (397)
T 3oz2_A 77 GPSEKRPIILQSE-KAGNEVGYVLERDKFDKHLAALAAKAG-ADVWVKSPALGVIK-------------------ENGKV 135 (397)
T ss_dssp CTTCSSCEEEECS-SSSCCCEEEECHHHHHHHHHHHHHHHT-CEEESSCCEEEEEE-------------------ETTEE
T ss_pred eCCCceEeecccc-ccCCceeEEEEHHHHHHHHHHHHHhcC-cEEeeeeeeeeeee-------------------cccee
Confidence 7666555544432 234456789999999999999999987 89999999999876 12222
Q ss_pred eEEEe-CCCc--EEEeeEEEeecCCCChhhhhhCCCCCCCcccCeEEEEEEeecC---CCCeeEEEe---cCCCcEEEee
Q 013000 161 AKLDL-SDGT--SLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNK---ENYCAWQRF---LPAGPIALLP 231 (451)
Q Consensus 161 v~v~~-~dg~--~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~---~~~g~~~~~p 231 (451)
+.+.. .+|. +++||+||||||++|.||++++................+.... ........+ .++++.|++|
T Consensus 136 ~~v~~~~~~~~~~~~a~~vIgAdG~~S~vr~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 215 (397)
T 3oz2_A 136 AGAKIRHNNEIVDVRAKMVIAADGFESEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLGSIAPAGYIWVFP 215 (397)
T ss_dssp EEEEEEETTEEEEEEEEEEEECCCTTCHHHHHHTCGGGCCCGGGEEEEEEEEEESCCCCTTEEEEECSTTSTTEEEEEEE
T ss_pred eeeeecccccceEEEEeEEEeCCccccHHHHHcCCCcccccceeeeeeEEEEeeccccCcccceeeeeccCCCceEEEee
Confidence 33332 2333 6899999999999999999998776555544444443333321 112222222 3678899999
Q ss_pred cCCCceEEEEEcCccchHHhhcCCHHHHHHHHHHhhccCCCCCCCCCCCCcccccccccCCcccccccccCCCcceeeec
Q 013000 232 IGDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLA 311 (451)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (451)
.+++..++.+....+.... .....++++.+....+ .+.. . ......
T Consensus 216 ~~~~~~~vg~~~~~~~~~~--~~~~~~~l~~~~~~~~----------------~l~~---~-------------~~~~~~ 261 (397)
T 3oz2_A 216 KGEGMANVGIGSSINWIHN--RFELKNYLDRFIENHP----------------GLKK---G-------------QDIQLV 261 (397)
T ss_dssp EETTEEEEEEEEETTTSCS--HHHHHHHHHHHHHTCH----------------HHHT---S-------------EEEEEE
T ss_pred cccceeEEEEeeccchhhh--hhhHHHHHHHHHHhCc----------------cccc---c-------------ceeeee
Confidence 9988888777654332111 0011222222222110 0000 0 000000
Q ss_pred CcceeeecccccccccccCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhh
Q 013000 312 SERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPAN 391 (451)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~ 391 (451)
....|+. .....|..+||+|+|||||.++|++|||+|+||+||..||+.|.++++.++ . ++.+|+.|++.+++++
T Consensus 262 --~~~~~~~-~~~~~~~~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~~~-~-~~~~L~~Ye~~~~~~~ 336 (397)
T 3oz2_A 262 --TGGVSVS-KVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESND-Y-SPQMMQKYEKLIKERF 336 (397)
T ss_dssp --EEEEECC-CCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTC-C-SHHHHHHHHHHHHHHH
T ss_pred --ecccccc-CcccceeeeeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHcCC-c-cHHHHHHHHHHHHHHH
Confidence 0011211 223457789999999999999999999999999999999999999988763 2 4789999999999888
Q ss_pred HHHHHHHHHHHHhhc
Q 013000 392 IVMMAVLDGFQKAYS 406 (451)
Q Consensus 392 ~~~~~~s~~~~~~~~ 406 (451)
.+.+.........+.
T Consensus 337 ~~~~~~~~~~~~~~~ 351 (397)
T 3oz2_A 337 ERKHLRNWVAKEKLA 351 (397)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 776665555555443
No 18
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=100.00 E-value=4.7e-33 Score=286.45 Aligned_cols=340 Identities=14% Similarity=0.146 Sum_probs=240.6
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHHHHHHCCCchhhhhhhcccccEEEEE
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVW 80 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~~~~~~~~~~~~~~~~~~ 80 (451)
|||+++|+.|+++ |++|+|||+.+.++ ...|..+.+.+..+|+.+|+++.+...+........+.
T Consensus 33 ~AGl~aA~~Lar~----G~~V~LiEr~~~~~-----------~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~ 97 (591)
T 3i3l_A 33 PAGSVAGLTLHKL----GHDVTIYERSAFPR-----------YRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFL 97 (591)
T ss_dssp HHHHHHHHHHHHT----TCEEEEECSSCSSC-----------CCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEE
T ss_pred HHHHHHHHHHHcC----CCCEEEEcCCCCCC-----------CceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEE
Confidence 5899999999994 99999999998762 23378899999999999999998888665333333333
Q ss_pred eCCCcceeEeecCCCC----CccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccc
Q 013000 81 DYTGLGYTKYNARDVN----KEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFT 156 (451)
Q Consensus 81 ~~~~~~~~~~~~~~~~----~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (451)
.........+...... ....++.++|..|.+.|.+.+.+.| ++++++++|++++. +
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~G-v~i~~g~~V~~v~~-------------------~ 157 (591)
T 3i3l_A 98 WGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRG-ITVHEETPVTDVDL-------------------S 157 (591)
T ss_dssp CSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTT-CEEETTCCEEEEEC-------------------C
T ss_pred ecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCC-CEEEeCCEEEEEEE-------------------c
Confidence 2222222222211111 2345688999999999999999876 99999999999976 1
Q ss_pred CCCeeEEEeC-CC--cEEEeeEEEeecCCCChhhhhhCCCCCCCcccCeEEEEEEeec----C-CCCeeEEEecCCCcEE
Q 013000 157 KGHLAKLDLS-DG--TSLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHN----K-ENYCAWQRFLPAGPIA 228 (451)
Q Consensus 157 ~~~~v~v~~~-dg--~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~g~~~ 228 (451)
++..+.|.+. +| .++.||+||+|||.+|.+|++++.......+...++...+... . .....+..+.+.|++|
T Consensus 158 ~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~~~~~~~~~~~~~~~~~G~~w 237 (591)
T 3i3l_A 158 DPDRVVLTVRRGGESVTVESDFVIDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDPFEGDLKGTTYSITFEDGWVW 237 (591)
T ss_dssp STTCEEEEEEETTEEEEEEESEEEECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCSCCSTTTTCEEEEEETTEEEE
T ss_pred CCCEEEEEEecCCceEEEEcCEEEECCCCcchhHHHcCCCCCCccccceEEEEEEecCccccCCCCCceEEEEcCCcEEE
Confidence 3456778877 77 5799999999999999999999876443333344444444332 1 1245566677999999
Q ss_pred EeecCCCceEEEEEcCccchHHhhcCCHHHHHHHHHHhhccCCCCCCCCCCCCcccccccccCCcccccccccCCCccee
Q 013000 229 LLPIGDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVV 308 (451)
Q Consensus 229 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (451)
++|+.++..++.|..+..........+.+++.+.+...++ .....+.+.
T Consensus 238 ~iPl~~~~~sv~~~~~~~~~~~l~~~~~~~~~~~l~~~~p---------------~l~~~l~~~---------------- 286 (591)
T 3i3l_A 238 MIPIKDDLYSVGLVVDRSKSAEVREQGADAFYSSTLAKCA---------------KAMDILGGA---------------- 286 (591)
T ss_dssp EEECSSSEEEEEEEEEGGGHHHHHHHCHHHHHHHHHTTCH---------------HHHHHHTTC----------------
T ss_pred EEECCCCeEEEEEEcCHHHHhhhccCCHHHHHHHHHHhCH---------------HHHHHHhcC----------------
Confidence 9999999888888877655443333455666655544221 011111000
Q ss_pred eecCcceeeecccccccccccCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhc
Q 013000 309 KLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERK 388 (451)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~ 388 (451)
........++......++|..+|++|||||||.++|+.|+|+|+|++||..||++|...+..+. ..+.+++.|++.|+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~rvvLIGDAAh~~~Pl~GqGinlAl~dA~~LA~~L~~~l~~~~--~~~~al~~Y~~~~~ 364 (591)
T 3i3l_A 287 EQVDEVRIVQDWSYDTEVFSADRFFLCGDAACFTDPLFSQGVHLASQSAVSAAAAIDRITRHGD--EKDAVHAWYNRTYR 364 (591)
T ss_dssp EECSCCEEEEEEEEEESCSEETTEEECGGGTCBCCGGGCCHHHHHHHHHHHHHHHHHHHHHCGG--GHHHHHHHHHHHHH
T ss_pred ccccCceEecccccchhhcccCCEEEEccccccCCCcccccHHHHHHHHHHHHHHHHHHHhCCc--hHHHHHHHHHHHHH
Confidence 0001111112222235678889999999999999999999999999999999999998876432 24678999999999
Q ss_pred hhhHHHHHHHHHHH--HhhcCC
Q 013000 389 PANIVMMAVLDGFQ--KAYSVD 408 (451)
Q Consensus 389 ~~~~~~~~~s~~~~--~~~~~~ 408 (451)
+++.+++......+ ......
T Consensus 365 ~~~~~i~~~~~~~Y~~~~~~r~ 386 (591)
T 3i3l_A 365 EAYEQYHQFLASFYTFASFTEP 386 (591)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHhhccCC
Confidence 99999999988888 444443
No 19
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=100.00 E-value=6.5e-32 Score=269.10 Aligned_cols=325 Identities=11% Similarity=0.099 Sum_probs=231.0
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHHHHHHCCCchhhhhhhcccccEEEEE
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVW 80 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~~~~~~~~~~~~~~~~~~ 80 (451)
|+||++|+.|++ +|++|+||||.+.++ ...|..+++.+...|+.+|+++.+.+.+.....+..+.
T Consensus 15 ~aGl~~A~~La~----~G~~V~v~E~~~~~~-----------~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 79 (421)
T 3nix_A 15 PAGTVAASLVNK----SGFKVKIVEKQKFPR-----------FVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFV 79 (421)
T ss_dssp HHHHHHHHHHHT----TTCCEEEECSSCSSC-----------CCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEE
T ss_pred HHHHHHHHHHHh----CCCCEEEEeCCCCCC-----------CcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEE
Confidence 589999999999 599999999998763 23488999999999999999999988776455566665
Q ss_pred eCCCcceeEeecCCCCCccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCe
Q 013000 81 DYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL 160 (451)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (451)
.........+..........++.++|..|.+.|.+.+.+.| ++|+++++|++++. .++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~g-v~i~~~~~v~~i~~--------------------~~~~ 138 (421)
T 3nix_A 80 RGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQG-VDVEYEVGVTDIKF--------------------FGTD 138 (421)
T ss_dssp ETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHT-CEEECSEEEEEEEE--------------------ETTE
T ss_pred eCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCC-CEEEcCCEEEEEEE--------------------eCCE
Confidence 54433333333222233456789999999999999999886 99999999999976 2233
Q ss_pred --eEEEeCCCc--EEEeeEEEeecCCCChhhhhhCCCCCCCcccCeEEEEEEeecCCC------Ce-eE-EEecCCCcEE
Q 013000 161 --AKLDLSDGT--SLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKEN------YC-AW-QRFLPAGPIA 228 (451)
Q Consensus 161 --v~v~~~dg~--~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~------~~-~~-~~~~~~g~~~ 228 (451)
+.|...+|+ ++.||+||+|||.+|.+|+.++.......+...++...+....+. .. .+ ....+.+++|
T Consensus 139 ~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 218 (421)
T 3nix_A 139 SVTTIEDINGNKREIEARFIIDASGYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPVAAEMEGNRITAVVHKPKVWIW 218 (421)
T ss_dssp EEEEEEETTSCEEEEEEEEEEECCGGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC----CCSEEEEEEEETTEEEE
T ss_pred EEEEEEcCCCCEEEEEcCEEEECCCCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCCccCCCCeEEEEEeCCCCEEEE
Confidence 566668888 799999999999999999999887666666666666666543221 11 11 1123778999
Q ss_pred EeecCCCceEEEEEcCccchHHhhcCCHHHHHHHHHHhhccCCCCCCCCCCCCcccccccccCCcccccccccCCCccee
Q 013000 229 LLPIGDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVV 308 (451)
Q Consensus 229 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (451)
++|.+++...+.+..+....... ..+.++++..+....+ . ..+.+.. .
T Consensus 219 ~~P~~~~~~~vg~~~~~~~~~~~-~~~~~~~l~~~~~~~p-----~-------~~~~l~~----~--------------- 266 (421)
T 3nix_A 219 VIPFSNGNTSVGFVGEPSYFDEY-TGTPEERMRAMIANEG-----H-------IAERFKS----E--------------- 266 (421)
T ss_dssp EEECTTSEEEEEEEECHHHHTTS-CSCHHHHHHHHHHTCT-----T-------THHHHTT----C---------------
T ss_pred EEEECCCCEEEEEEecHHHhhhc-CCCHHHHHHHHHHhCc-----H-------HHHHHhc----C---------------
Confidence 99999999888888765432221 2355555555544221 0 0001110 0
Q ss_pred eecCcceeeecccccccccccCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhc
Q 013000 309 KLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERK 388 (451)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~ 388 (451)
........++......++|..++++|||||||.++|+.|+|+++|++||..|+++|...+..+. ...++.|++.++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~la~~l~~~~~~~~----~~~~~~y~~~~~ 342 (421)
T 3nix_A 267 EFLFEPRTIEGYAISASKLYGDGFVLTGNATEFLDPIFSSGATFAMESGSKGGKLAVQFLKGEE----VNWEKDFVEHMM 342 (421)
T ss_dssp CBSSCCEEEECCCBEESCSEETTEEECGGGTCBCCSTTCCHHHHHHHHHHHHHHHHHHHHTTCC----CCHHHHTHHHHH
T ss_pred ccccCceeecccceeeeeeccCCEEEecccccccCCcccccHHHHHHHHHHHHHHHHHHhcCCc----hhHHHHHHHHHH
Confidence 0001112234444446778889999999999999999999999999999999999999876432 236778988887
Q ss_pred hhhHHHHHH
Q 013000 389 PANIVMMAV 397 (451)
Q Consensus 389 ~~~~~~~~~ 397 (451)
.........
T Consensus 343 ~~~~~~~~~ 351 (421)
T 3nix_A 343 QGIDTFRSF 351 (421)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 765544443
No 20
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=100.00 E-value=2.3e-32 Score=274.82 Aligned_cols=324 Identities=15% Similarity=0.121 Sum_probs=219.0
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHHHHHHCCCchhhhhhhcccccEEEEE
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVW 80 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~~~~~~~~~~~~~~~~~~ 80 (451)
||||++|+.|++ +|++|+||||.+.++.. ....|..+ +.+.|+++|+.+...........++.++
T Consensus 16 ~aGl~aA~~La~----~G~~V~vlE~~~~~~~g--------~~~~g~~l---~~~~l~~lg~~~~~~~~~~~~~~~~~~~ 80 (453)
T 3atr_A 16 FAGSSAAYQLSR----RGLKILLVDSKPWNRIG--------DKPCGDAV---SKAHFDKLGMPYPKGEELENKINGIKLY 80 (453)
T ss_dssp HHHHHHHHHHSS----SSCCEEEECSSCGGGTT--------CSCCCCEE---EHHHHHHTTCCCCCGGGEEEEEEEEEEE
T ss_pred HHHHHHHHHHHH----CCCCEEEEECCCCCCCC--------cccccccc---cHHHHHHhcCCCCchHHHHhhhcceEEE
Confidence 689999999999 49999999999875210 11124445 4678899998765433222234456666
Q ss_pred eCCCcceeEeecCCCCCccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCe
Q 013000 81 DYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL 160 (451)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (451)
+.++.....+ +..++.++|..|.+.|.+.+.+.| ++|+++++|++++. .++.
T Consensus 81 ~~~~~~~~~~-------~~~~~~i~r~~l~~~L~~~a~~~g-v~i~~~~~v~~i~~--------------------~~~~ 132 (453)
T 3atr_A 81 SPDMQTVWTV-------NGEGFELNAPLYNQRVLKEAQDRG-VEIWDLTTAMKPIF--------------------EDGY 132 (453)
T ss_dssp CTTSSCEEEE-------EEEEEEECHHHHHHHHHHHHHHTT-CEEESSEEEEEEEE--------------------ETTE
T ss_pred CCCCceEEeE-------CCCcEEEcHHHHHHHHHHHHHHcC-CEEEeCcEEEEEEE--------------------ECCE
Confidence 5554332222 224688999999999999999876 99999999999976 3344
Q ss_pred eE-EEeC---CCc--EEEeeEEEeecCCCChhhhhhCCCCC--CCc---ccCeEEEEEEeecCCC--CeeE-EEe----c
Q 013000 161 AK-LDLS---DGT--SLYAKLVVGADGGKSRVRELAGFKTT--GWS---YSQNAIICTVEHNKEN--YCAW-QRF----L 222 (451)
Q Consensus 161 v~-v~~~---dg~--~~~adlvVgADG~~S~vR~~l~~~~~--~~~---~~~~~~~~~~~~~~~~--~~~~-~~~----~ 222 (451)
+. |++. ||+ ++.||+||+|||.+|.+|+.++.... ... ....++...+....+. .... ..+ .
T Consensus 133 v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (453)
T 3atr_A 133 VKGAVLFNRRTNEELTVYSKVVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETS 212 (453)
T ss_dssp EEEEEEEETTTTEEEEEECSEEEECCGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCTTTS
T ss_pred EEEEEEEEcCCCceEEEEcCEEEECcCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEEECCCCC
Confidence 43 5543 776 79999999999999999999986542 111 1134445545544322 1222 222 2
Q ss_pred CCCcEEEeecCCCceEEEEEcCccchHHhhcCCHHHHHHHHHHhhccCCCCCCCCCCCCcccccccccCCcccccccccC
Q 013000 223 PAGPIALLPIGDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFE 302 (451)
Q Consensus 223 ~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (451)
+++++|++|.+++..++++........ ....+.+.+.+....+ .+ ..
T Consensus 213 ~~g~~~~~P~~~~~~~vg~~~~~~~~~---~~~~~~~~~~l~~~~~-~~---------------~~-------------- 259 (453)
T 3atr_A 213 PGGYWWYFPKGKNKVNVGLGIQGGMGY---PSIHEYYKKYLDKYAP-DV---------------DK-------------- 259 (453)
T ss_dssp TTSCEEEEEEETTEEEEEEEEESSSCC---CCHHHHHHHHHHHHCT-TE---------------EE--------------
T ss_pred CCcEEEEEECCCCeEEEEEEecCCCCC---CCHHHHHHHHHHhhhh-hc---------------CC--------------
Confidence 678999999998888887776433210 0122344444433111 00 00
Q ss_pred CCcceeeecCcceeeecccccccccccCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhcCCCCChHHHHHH
Q 013000 303 VPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKK 382 (451)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~ 382 (451)
..+.... ....|. ....++|..+|++|+|||||.++|++|||+|+||+||..||++|..++..+. . .+.+|+.
T Consensus 260 --~~~~~~~--~~~~p~-~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~l~~~~-~-~~~~L~~ 332 (453)
T 3atr_A 260 --SKLLVKG--GALVPT-RRPLYTMAWNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETGD-F-SASGLWD 332 (453)
T ss_dssp --EEEEEEE--EEEEEC-SSCCSCSEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTC-C-STTTTTH
T ss_pred --CeEEecc--ceeccC-CCCCCceecCCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHHHHHHHcCC-c-cHHHHHH
Confidence 0011110 011232 3446788899999999999999999999999999999999999998876442 2 2568999
Q ss_pred HHHhhchhhHHHHHHHHHHHHhhcC
Q 013000 383 YEAERKPANIVMMAVLDGFQKAYSV 407 (451)
Q Consensus 383 Ye~~r~~~~~~~~~~s~~~~~~~~~ 407 (451)
|+++|++++...+..++.+..++..
T Consensus 333 Y~~~r~~~~~~~~~~~~~~~~~~~~ 357 (453)
T 3atr_A 333 MNICYVNEYGAKQASLDIFRRFLQK 357 (453)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888887654
No 21
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=100.00 E-value=1.3e-31 Score=264.63 Aligned_cols=328 Identities=15% Similarity=0.118 Sum_probs=221.9
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCCC-CCCCCCCCCCCCceeeecHHHHHHHHHCCCchhhhhhhcccccEEEE
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALGK-SNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQV 79 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~~~~~~~~~~~~~~~~~ 79 (451)
|+||++|+.|++ +|++|+||||++.+.. ..| +..+++ +.++.+|+++...... .....+.+
T Consensus 14 ~aGl~~A~~La~----~G~~V~l~E~~~~~g~~~~~----------~~~~~~---~~~~~lg~~~~~~~~~-~~~~~~~~ 75 (397)
T 3cgv_A 14 PGGSTAARYAAK----YGLKTLMIEKRPEIGSPVRC----------GEGLSK---GILNEADIKADRSFIA-NEVKGARI 75 (397)
T ss_dssp HHHHHHHHHHHH----TTCCEEEECSSSSTTCSCCS----------CCEEET---HHHHHTTCCCCTTTEE-EEESEEEE
T ss_pred HHHHHHHHHHHH----CCCCEEEEeCCCCCCCCccc----------ccccCH---HHHHHcCCCCChHHhh-hhcceEEE
Confidence 589999999999 4999999999986632 222 444543 5688889866532222 24567777
Q ss_pred EeCCCcceeEeecCCCCCccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCC
Q 013000 80 WDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGH 159 (451)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (451)
++..+.....++.... ....++.++|..|.+.|.+.+.+.| ++|+++++|++++. .++
T Consensus 76 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~g-v~i~~~~~v~~i~~--------------------~~~ 133 (397)
T 3cgv_A 76 YGPSEKRPIILQSEKA-GNEVGYVLERDKFDKHLAALAAKAG-ADVWVKSPALGVIK--------------------ENG 133 (397)
T ss_dssp ECTTCSSCEEEC------CCCEEEECHHHHHHHHHHHHHHHT-CEEESSCCEEEEEE--------------------ETT
T ss_pred EcCCCCEEEEEecccc-CCceeEEEeHHHHHHHHHHHHHhCC-CEEEECCEEEEEEE--------------------eCC
Confidence 7766544244432221 2446789999999999999999876 99999999999976 345
Q ss_pred eeE-EEe---CCCcEEEeeEEEeecCCCChhhhhhCCCC-CCCcc-cCeEEEEEEeec-CCCCeeEEEe---cCCCcEEE
Q 013000 160 LAK-LDL---SDGTSLYAKLVVGADGGKSRVRELAGFKT-TGWSY-SQNAIICTVEHN-KENYCAWQRF---LPAGPIAL 229 (451)
Q Consensus 160 ~v~-v~~---~dg~~~~adlvVgADG~~S~vR~~l~~~~-~~~~~-~~~~~~~~~~~~-~~~~~~~~~~---~~~g~~~~ 229 (451)
.+. |.+ .++.++.||+||+|||.+|.+|+.++... ..... ...++...+... .+.......+ .+.+++|+
T Consensus 134 ~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 213 (397)
T 3cgv_A 134 KVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLGSIAPAGYIWV 213 (397)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHHTCCTTCCCGGGEEEEEEEEEESCCCCTTEEEEECSTTSTTEEEEE
T ss_pred EEEEEEEEECCeEEEEEcCEEEECCCcchHhHHhcCCCccCCChhheeEEEEEEeccCCCCCCcEEEEeCCcCCCceEEE
Confidence 554 666 34568999999999999999999998765 32111 112222222222 2222222222 47789999
Q ss_pred eecCCCceEEEEEcCccchHHhhcCCHHHHHHHHHHhhccCCCCCCCCCCCCcccccccccCCcccccccccCCCcceee
Q 013000 230 LPIGDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVK 309 (451)
Q Consensus 230 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (451)
+|.+++..++.|....... .......+.+...+. ... .+. . ..+..
T Consensus 214 ~P~~~~~~~vg~~~~~~~~-----~~~~~~~~~l~~~~~-~~~------------~~~---------------~-~~~~~ 259 (397)
T 3cgv_A 214 FPKGEGMANVGIGSSINWI-----HNRFELKNYLDRFIE-NHP------------GLK---------------K-GQDIQ 259 (397)
T ss_dssp EEEETTEEEEEEEEETTTC-----SCHHHHHHHHHHHHH-TCH------------HHH---------------T-SEEEE
T ss_pred EECCCCeEEEEEEeccccc-----cCCCCHHHHHHHHHH-hCc------------CCC---------------C-CeEEe
Confidence 9999988888887754421 111222222222111 000 000 0 00111
Q ss_pred ecCcceeeecccccccccccCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhch
Q 013000 310 LASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKP 389 (451)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~ 389 (451)
.....+|+. ...++|..+|++++|||||.++|++|+|+++|++||..|++.|...+..+. ..+.+|+.|++.|++
T Consensus 260 --~~~~~~p~~-~~~~~~~~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~la~~l~~~~~~~~--~~~~~l~~Y~~~~~~ 334 (397)
T 3cgv_A 260 --LVTGGVSVS-KVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESND--YSPQMMQKYEKLIKE 334 (397)
T ss_dssp --EEEEEEECC-CCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTC--CSHHHHHHHHHHHHH
T ss_pred --eeeeeeecC-CCccceeeCCEEEEEccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCC--ccHHHHHHHHHHHHH
Confidence 011224443 236778889999999999999999999999999999999999998876553 247899999999999
Q ss_pred hhHHHHHHHHHHHHhhcC
Q 013000 390 ANIVMMAVLDGFQKAYSV 407 (451)
Q Consensus 390 ~~~~~~~~s~~~~~~~~~ 407 (451)
++.+.+..++.+..++..
T Consensus 335 ~~~~~~~~~~~~~~~~~~ 352 (397)
T 3cgv_A 335 RFERKHLRNWVAKEKLAM 352 (397)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999998887754
No 22
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=100.00 E-value=5.1e-33 Score=273.43 Aligned_cols=326 Identities=13% Similarity=0.099 Sum_probs=210.7
Q ss_pred CcHHHHHHHhcCCCCCC--CcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHHHHHHCCCc-hh-hhhhhcccccE
Q 013000 1 MVGMALACSLASMPLTK--HLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAW-QY-VQQHRHAYFDK 76 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~--g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~-~~-~~~~~~~~~~~ 76 (451)
|+||++|+.|++ + |++|+||||++.++..|+ ++.+++++++.+...++. +. +..... ....
T Consensus 10 ~aGl~~A~~L~~----~~~G~~V~v~E~~~~~~~~g~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 74 (381)
T 3c4a_A 10 PAGLVFASQLKQ----ARPLWAIDIVEKNDEQEVLGW----------GVVLPGRPGQHPANPLSYLDAPERLNPQ-FLED 74 (381)
T ss_dssp HHHHHHHHHHHH----HCTTSEEEEECSSCTTCCCCS----------EEEEESCTTTCTTCGGGGSSCGGGGCCE-EECC
T ss_pred HHHHHHHHHHHh----cCCCCCEEEEECCCCCCccee----------EEEeCcHHHHhhcCcchhhhhhHHHhhc-cccc
Confidence 689999999999 5 999999999988754444 999999887733333344 44 433222 3445
Q ss_pred EEEEeCCCcceeEeecCCCCCccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCcccccc
Q 013000 77 MQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFT 156 (451)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (451)
+.++. .+.. . .. ......+.++|..|.+.|.+.+.+.+ ++|+++++|++++.
T Consensus 75 ~~~~~-~g~~-~--~~---~~~~~~~~~~r~~l~~~L~~~~~~~g-v~i~~~~~v~~i~~-------------------- 126 (381)
T 3c4a_A 75 FKLVH-HNEP-S--LM---STGVLLCGVERRGLVHALRDKCRSQG-IAIRFESPLLEHGE-------------------- 126 (381)
T ss_dssp EEEEE-SSSE-E--EC---CCCSCEEEEEHHHHHHHHHHHHHHTT-CEEETTCCCCSGGG--------------------
T ss_pred eEEEe-CCee-E--Ee---cCCCceeeecHHHHHHHHHHHHHHCC-CEEEeCCEeccchh--------------------
Confidence 56665 3321 1 11 11223468999999999999999886 99999999999843
Q ss_pred CCCeeEEEeCCCcEEEeeEEEeecCCCChhhhhhC----CCCCCCcccCeEEEEEEeecCCCCeeEEEecCCCcEE--Ee
Q 013000 157 KGHLAKLDLSDGTSLYAKLVVGADGGKSRVRELAG----FKTTGWSYSQNAIICTVEHNKENYCAWQRFLPAGPIA--LL 230 (451)
Q Consensus 157 ~~~~v~v~~~dg~~~~adlvVgADG~~S~vR~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~ 230 (451)
. +++.+|+||+|||.+|. |+.+. +.... ......+.+.... .+....+..+.+.|+++ ++
T Consensus 127 ~-----------~~~~ad~vV~AdG~~S~-R~~l~~~~g~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~ 192 (381)
T 3c4a_A 127 L-----------PLADYDLVVLANGVNHK-TAHFTEALVPQVDY-GRNKYIWYGTSQL-FDQMNLVFRTHGKDIFIAHAY 192 (381)
T ss_dssp C-----------CGGGCSEEEECCGGGGG-TCCSSGGGCCCCEE-EEEEEEEEEESSC-CSSEEEEEEEETTEEEEEEEE
T ss_pred c-----------ccccCCEEEECCCCCch-HHhhhhhcCCCccc-CCccEEEEecCCC-CCcceeeEeeCCCcEEEEEEE
Confidence 1 12579999999999999 99873 22111 0112222222111 11222222344667654 68
Q ss_pred ecCCCceEEEEEcCccchH--HhhcCCHHHHHHHHHHhhccCCCCCCCCCCCCcccccccccCCcccccccccCCCccee
Q 013000 231 PIGDNFSNIVWTMNPKDAS--DCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVV 308 (451)
Q Consensus 231 p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (451)
|++++...+++..+.+... .....+.+++.+.+.+.+. ++.+.. .++
T Consensus 193 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~------------------------------~l~ 241 (381)
T 3c4a_A 193 KYSDTMSTFIVECSEETYARARLGEMSEEASAEYVAKVFQ-AELGGH------------------------------GLV 241 (381)
T ss_dssp ECSSSCEEEEEEECHHHHHHTTSSSSCHHHHHHHHHHHTH-HHHTTC------------------------------CCB
T ss_pred EecCCeEEEEEECCccccccCCcccCChHHHHHHHHHHhc-ccCCCc------------------------------hhh
Confidence 9988775443333221110 1122355666777766554 111100 000
Q ss_pred eecCcceeeecc-cccccccccCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhh
Q 013000 309 KLASERMVFPLS-LKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAER 387 (451)
Q Consensus 309 ~~~~~~~~~~~~-~~~~~~~~~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r 387 (451)
.... ..|++. ...+++|..|||+|||||||+|+|+.|||+|+||+||..|+++|... . +.+.+|+.|+++|
T Consensus 242 ~~~~--~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~~----~--~~~~aL~~Y~~~r 313 (381)
T 3c4a_A 242 SQPG--LGWRNFMTLSHDRCHDGKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCTE----D--GVPAALKRFEERA 313 (381)
T ss_dssp CCTT--TCSEEEEECCCSCSEETTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHHS----S--SHHHHHHHHHHHH
T ss_pred cCCC--cceeeeccccCCCcccCCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhcc----c--cHHHHHHHHHHHH
Confidence 0000 123333 23467899999999999999999999999999999999999999874 1 2488999999999
Q ss_pred chhhHHHHHHHHHHHHhhcCC-----CchHHHHHHHHHHh
Q 013000 388 KPANIVMMAVLDGFQKAYSVD-----FGPLNILRAAAFHG 422 (451)
Q Consensus 388 ~~~~~~~~~~s~~~~~~~~~~-----~~~~~~~r~~~~~~ 422 (451)
++++..++..++.+...+... .++....|+..++.
T Consensus 314 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 353 (381)
T 3c4a_A 314 LPLVQLFRGHADNSRVWFETVEERMHLSSAEFVQSFDARR 353 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSCC------CHHHHGGGTT
T ss_pred HHHHHHHHHHHHHhhhhhhchhhhhcCCHHHHHHHHhhcc
Confidence 999999999999988554332 14556677777766
No 23
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.96 E-value=3.3e-28 Score=248.87 Aligned_cols=322 Identities=15% Similarity=0.113 Sum_probs=210.6
Q ss_pred CcHHHHHHHhcC------------CCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHHHHHHCCCchh--h
Q 013000 1 MVGMALACSLAS------------MPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQY--V 66 (451)
Q Consensus 1 paGl~lA~~L~~------------~~~~~g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~~~--~ 66 (451)
|||+++|+.|++ . |++|+|||+.+.++ .+.|..+.|++..+|+.+|+.+. +
T Consensus 17 ~aGl~aA~~La~~~~~~~~~~~~~~----G~~V~liE~~~~~~-----------~g~g~~~~p~~~~~l~~lGi~e~~~~ 81 (526)
T 2pyx_A 17 TAGWITAGLLAAEHNVDKGVLAHSP----KLNITLIESPDVAT-----------IGVGEGTWPSMRSTLSKIGIDENDFI 81 (526)
T ss_dssp HHHHHHHHHHHHHHHEETTEECSSC----SCEEEEEECSSCCC-----------CCSCEECCTHHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHHHhhhccccccccCCC----CCeEEEEeCCCCCC-----------cceeeechHhHHHHHHHcCCCHHHHH
Confidence 689999999998 5 99999999977652 22288999999999999999986 5
Q ss_pred hhhhcccccEEEEEeCCC-------cc-e-----------eEeec---------------------------------CC
Q 013000 67 QQHRHAYFDKMQVWDYTG-------LG-Y-----------TKYNA---------------------------------RD 94 (451)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~-------~~-~-----------~~~~~---------------------------------~~ 94 (451)
...+.....++.+.+... .. . ..+.. ..
T Consensus 82 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~~~~~~~ 161 (526)
T 2pyx_A 82 RQCDASFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSIVTAQ 161 (526)
T ss_dssp HHTTCEEECEEEEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSSCTTSCT
T ss_pred HHcCCEEECCCcccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchhhhhccc
Confidence 554432233333321110 00 0 00100 00
Q ss_pred -CCCccceeeechHHHHHHHHHHhhc-CCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEE
Q 013000 95 -VNKEILGCVVENKVLHSSLLSCMQN-TEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLY 172 (451)
Q Consensus 95 -~~~~~~~~~i~R~~L~~~L~~~~~~-~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~ 172 (451)
......++.++|..|.+.|.+.+.+ .| ++++++ +|++++. ++ ++..+.|.+.+|.++.
T Consensus 162 ~~~~~~~~~~~~r~~l~~~L~~~a~~~~G-v~i~~~-~v~~i~~-----------~~-------~g~~~~v~~~~g~~i~ 221 (526)
T 2pyx_A 162 YHFQNNYGYHLNAAKFSQLLTEHCTQKLG-VTHIRD-HVSQIIN-----------NQ-------HGDIEKLITKQNGEIS 221 (526)
T ss_dssp TCCSSCCEEEECHHHHHHHHHHHHHHTSC-CEEEEC-CEEEEEE-----------CT-------TSCEEEEEESSSCEEE
T ss_pred cCCCCCeeEEEcHHHHHHHHHHHHHhcCC-CEEEEe-EEEEEEe-----------cC-------CCcEEEEEECCCCEEE
Confidence 0112346889999999999999998 66 999999 6999976 10 1234578888888899
Q ss_pred eeEEEeecCCCChh-hhhhCCCCCCCc---ccCeEEEEEEeecC----CCCeeEEEecCCCcEEEeecCCCceEEEEEcC
Q 013000 173 AKLVVGADGGKSRV-RELAGFKTTGWS---YSQNAIICTVEHNK----ENYCAWQRFLPAGPIALLPIGDNFSNIVWTMN 244 (451)
Q Consensus 173 adlvVgADG~~S~v-R~~l~~~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~ 244 (451)
||+||+|||.+|.+ |+.++....... ....++...+.... ........+.+.|++|++|+.++. .+.+...
T Consensus 222 ad~vV~AdG~~S~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~pl~~~~-~~~~v~~ 300 (526)
T 2pyx_A 222 GQLFIDCTGAKSLLLGEHLQVPFLSQKSVLFNDRALAIQVPYSDANSPIASCTHSTAQPNGWIWDIGLPTRK-GVGYVYS 300 (526)
T ss_dssp CSEEEECSGGGCCCCCCCTCCCEEECHHHHCCCEEEEEEEECSSTTCCCCSSEEEEEETTEEEEEEECSSEE-EEEEEEC
T ss_pred cCEEEECCCcchHHHHHHhCCCcccccccccCccEEEEEeeccCCCCCCCCceeEEecCCCeEEEeeCCCce-EEEEEec
Confidence 99999999999999 677776543221 12234444444331 112222335578899999998753 3344433
Q ss_pred ccchHHhhcCCHHHHHHHHHHhhccCCCCCCCCCCCCcccccccccCCcccccccccCCCcceeeecCcceeeecccccc
Q 013000 245 PKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHA 324 (451)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (451)
... .+.++..+.+...+. .+++ .+. . .....+++.....
T Consensus 301 ~~~------~~~~~~~~~l~~~l~-~~~~-----------~l~----------------------~-~~~~~~~~~~~~~ 339 (526)
T 2pyx_A 301 SSH------TNDIDAQKTLFNYLG-VDGA-----------AAD----------------------K-LEPRQLAINPGYR 339 (526)
T ss_dssp TTT------CCHHHHHHHHHHHHT-CCHH-----------HHH----------------------H-CCCEEEECCCEEE
T ss_pred CCC------CChHHHHHHHHHHHH-hcCc-----------ccc----------------------c-CCceEEecccCcc
Confidence 221 123444444544332 1100 000 0 0011234444445
Q ss_pred cccccCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHHHHHHHHHHHHh
Q 013000 325 NNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQKA 404 (451)
Q Consensus 325 ~~~~~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~~~~~s~~~~~~ 404 (451)
++|..|||+|||||||.++|+.|+|+|+||+||..|+++|..... ..+.+++.|+++|++++.++..........
T Consensus 340 ~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~da~~La~~L~~~~~-----~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~~ 414 (526)
T 2pyx_A 340 AKCWQNNCIAIGMAAGFIEPLEASALALIEWTASTLAQQLPPNRM-----VMDTISARVNERYQQHWQQIIDFLKLHYVI 414 (526)
T ss_dssp SCSEETTEEECGGGTEECCCTTCHHHHHHHHHHHHHHHTCCSCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccCCCEEEEEhhhcccCccccccHHHHHHHHHHHHHHhhhcCC-----cCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 677789999999999999999999999999999999998863111 236789999999999999988876666654
No 24
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.96 E-value=1.2e-27 Score=244.20 Aligned_cols=320 Identities=11% Similarity=0.071 Sum_probs=206.5
Q ss_pred CcHHHHHHHhcC---CCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHHHHHHCCCchh--hhhhhccccc
Q 013000 1 MVGMALACSLAS---MPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQY--VQQHRHAYFD 75 (451)
Q Consensus 1 paGl~lA~~L~~---~~~~~g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~~~--~~~~~~~~~~ 75 (451)
|+|+++|+.|++ . |++|+|||+.+.++ .+.|..+.+....+|+.+|+.+. +.........
T Consensus 12 ~aGl~~A~~La~~~~~----G~~V~lvE~~~~~~-----------~~~g~~~~~~~~~~l~~lgi~~~~~~~~~~~~~~~ 76 (511)
T 2weu_A 12 TAGWMTASYLKAAFDD----RIDVTLVESGNVRR-----------IGVGEATFSTVRHFFDYLGLDEREWLPRCAGGYKL 76 (511)
T ss_dssp HHHHHHHHHHHHHHGG----GSEEEEEEC------------------CCEECCTTHHHHHHHHTCCHHHHHHHTTCEEEC
T ss_pred HHHHHHHHHHHhhcCC----CCEEEEEecCCCCc-----------eeeccccCcchHHHHHHcCCCHHHHHHHcCCeEec
Confidence 589999999999 7 89999999987541 22377888999999999999875 4333221111
Q ss_pred EEEEE--eC--------CCcc------------------e-------------------------eEe----ecC-C---
Q 013000 76 KMQVW--DY--------TGLG------------------Y-------------------------TKY----NAR-D--- 94 (451)
Q Consensus 76 ~~~~~--~~--------~~~~------------------~-------------------------~~~----~~~-~--- 94 (451)
++.+. .. .+.. . ..+ +.. .
T Consensus 77 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 156 (511)
T 2weu_A 77 GIRFENWSEPGEYFYHPFERLRVVDGFNMAEWWLAVGDRRTSFSEACYLTHRLCEAKRAPRMLDGSLFASQVDESLGRST 156 (511)
T ss_dssp EEEEESSSSTTCEEEEESCCCCEETTEEHHHHHHHHC----CHHHHHCHHHHHHHTTBCSBCTTSCBCC------CCSCC
T ss_pred cceecCCCCCCCceEcCCCCCCCCCCCchHHHHHhccccccCcccccccccCHHHhhhhHHhHhcCCccccccccccccc
Confidence 22221 10 0000 0 000 000 0
Q ss_pred --CCC--ccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcE
Q 013000 95 --VNK--EILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTS 170 (451)
Q Consensus 95 --~~~--~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~ 170 (451)
... ...++.++|..|.+.|.+.+.+.| ++++++ +|++++. ++ ++..+.|.+.+|++
T Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~g-v~~~~~-~v~~i~~-----------~~-------~~~~~~v~~~~g~~ 216 (511)
T 2weu_A 157 LAEQRAQFPYAYHFDADEVARYLSEYAIARG-VRHVVD-DVQHVGQ-----------DE-------RGWISGVHTKQHGE 216 (511)
T ss_dssp GGGCCSCCSCEEEECHHHHHHHHHHHHHHTT-CEEEEC-CEEEEEE-----------CT-------TSCEEEEEESSSCE
T ss_pred cccCcCCCCeeEEEcHHHHHHHHHHHHHHCC-CEEEEC-eEeEEEE-----------cC-------CCCEEEEEECCCCE
Confidence 001 345688999999999999999876 999999 9999975 10 12347788899989
Q ss_pred EEeeEEEeecCCCChhh-hhhCCCCCC---CcccCeEEEEEEeecCC---CCeeEEEecCCCcEEEeecCCCceEEEEEc
Q 013000 171 LYAKLVVGADGGKSRVR-ELAGFKTTG---WSYSQNAIICTVEHNKE---NYCAWQRFLPAGPIALLPIGDNFSNIVWTM 243 (451)
Q Consensus 171 ~~adlvVgADG~~S~vR-~~l~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~ 243 (451)
+.||+||+|||.+|.+| +.++..... .......+...++...+ .......+.+.|++|++|+.+ ...+.+..
T Consensus 217 ~~ad~vV~A~G~~S~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~-~~~~g~~~ 295 (511)
T 2weu_A 217 ISGDLFVDCTGFRGLLINQTLGGRFQSFSDVLPNNRAVALRVPRENDEDMRPYTTATAMSAGWMWTIPLFK-RDGNGYVY 295 (511)
T ss_dssp EECSEEEECCGGGCCCCCCCTCCCEEECTTTCCCCEEEEEEEECSSGGGCCSSEEEEEETTEEEEEEECSS-EEEEEEEE
T ss_pred EEcCEEEECCCcchHHHHHHhCCCCccccccCcccceEEEEeccCCCCCCCcceeceecCCCcEEEEECCC-ceEEEEEE
Confidence 99999999999999995 455655321 12223344434443322 122334456888999999987 34444433
Q ss_pred CccchHHhhcCCHHHHHHHHHHhhccCCCCCCCCCCCCcccccccccCCcccccccccCCCcceeeecCcceeeeccccc
Q 013000 244 NPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKH 323 (451)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (451)
... ..+.++..+.+...+. +.+. + .....+++....
T Consensus 296 ~~~------~~~~~~~~~~l~~~~~--~~~~----------------------------~--------~~~~~~~~~~~~ 331 (511)
T 2weu_A 296 SDE------FISPEEAERELRSTVA--PGRD----------------------------D--------LEANHIQMRIGR 331 (511)
T ss_dssp CTT------TSCHHHHHHHHHHHHC--TTCT----------------------------T--------SCCEEEECCCEE
T ss_pred CCC------CCCHHHHHHHHHHHhC--cccc----------------------------c--------ccceeEEeeccc
Confidence 321 1344556666655442 1110 0 000011222223
Q ss_pred ccccccCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHHHHHHHHHHHH
Q 013000 324 ANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQK 403 (451)
Q Consensus 324 ~~~~~~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~~~~~s~~~~~ 403 (451)
.++|..+|++|||||||.++|+.|+|+++|++||..|+++|.. +.. .+.+|+.|++.|++++.++.........
T Consensus 332 ~~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~~----~~~--~~~~l~~Y~~~~~~~~~~~~~~~~~~y~ 405 (511)
T 2weu_A 332 NERTWINNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFPG----ERW--DPVLISAYNERMAHMVDGVKEFLVLHYK 405 (511)
T ss_dssp ESCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCCC----TTC--CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCEEEEechhhccCccccccHHHHHHHHHHHHHHhcc----CCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4566679999999999999999999999999999999999863 112 3789999999999999999888777776
Q ss_pred hhc
Q 013000 404 AYS 406 (451)
Q Consensus 404 ~~~ 406 (451)
...
T Consensus 406 ~~~ 408 (511)
T 2weu_A 406 GAQ 408 (511)
T ss_dssp HCC
T ss_pred hcC
Confidence 543
No 25
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.96 E-value=1.3e-27 Score=246.68 Aligned_cols=333 Identities=9% Similarity=0.030 Sum_probs=202.7
Q ss_pred CcHHHHHHHhcCCCCCC------CcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHHHHHHCCCchhhhhhhccc-
Q 013000 1 MVGMALACSLASMPLTK------HLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAY- 73 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~------g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~~~~~~~~~~~- 73 (451)
||||++|+.|++ . |++|+||||.+.++.. ...|..|.+++++.| ++ ++...+...
T Consensus 45 ~aGlaaA~~La~----~~~~~~~G~~V~vlEk~~~~g~~---------~~~g~~l~~~~l~~l--l~---~~~~~g~~~~ 106 (584)
T 2gmh_A 45 PAGLSAATRLKQ----LAAQHEKDLRVCLVEKAAHIGAH---------TLSGACLDPRAFEEL--FP---DWKEKGAPLN 106 (584)
T ss_dssp HHHHHHHHHHHH----HHHHTTCCCCEEEECSSSSTTTT---------CCCCCEECTHHHHHH--CT---THHHHTCCCC
T ss_pred HHHHHHHHHHHh----cccccCCCCcEEEEeCCCCCCCc---------cccccccCHHHHHHH--HH---HHHhcCCcee
Confidence 689999999999 5 8999999999876321 123667888887765 22 232222211
Q ss_pred ----ccEEEEEeCCCcceeEeec-CC-CCCccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCC
Q 013000 74 ----FDKMQVWDYTGLGYTKYNA-RD-VNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDS 147 (451)
Q Consensus 74 ----~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~ 147 (451)
...+.+....+ ...++. .. .......+.++|..|.++|.+.+.+.| ++|+++++|++++.
T Consensus 107 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~G-v~i~~g~~v~~l~~----------- 172 (584)
T 2gmh_A 107 TPVTEDRFGILTEKY--RIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALG-VEVYPGYAAAEILF----------- 172 (584)
T ss_dssp EECCEEEEEEECSSC--EEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTT-CEEETTCCEEEEEE-----------
T ss_pred eeechhheeeeccCC--CccccccCccccccCCCEEEeHHHHHHHHHHHHHHcC-CEEEcCCEEEEEEE-----------
Confidence 11233333322 122221 00 011223578999999999999999886 99999999999976
Q ss_pred CCCccccccCCCee-EEEeC------C---------CcEEEeeEEEeecCCCChhhhhh----CCCCCCCccc-CeEEEE
Q 013000 148 TPSATTLFTKGHLA-KLDLS------D---------GTSLYAKLVVGADGGKSRVRELA----GFKTTGWSYS-QNAIIC 206 (451)
Q Consensus 148 ~~~~~~~~~~~~~v-~v~~~------d---------g~~~~adlvVgADG~~S~vR~~l----~~~~~~~~~~-~~~~~~ 206 (451)
+.++.+ .|.+. | |.+++||+||+|||.+|.||+++ ++........ ...+..
T Consensus 173 --------~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~~g~g~~~ 244 (584)
T 2gmh_A 173 --------HEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGIGLKE 244 (584)
T ss_dssp --------CTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCEEEEEEE
T ss_pred --------cCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchhHHhhhhh
Confidence 112333 36654 3 46899999999999999999987 5443211111 112222
Q ss_pred EEeecC--CCC-eeEEEec------CCCcEEEeecC--CCceEEEEEcCccchHHhhcCCHHHHHHHHHHhhccCCCCCC
Q 013000 207 TVEHNK--ENY-CAWQRFL------PAGPIALLPIG--DNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHP 275 (451)
Q Consensus 207 ~~~~~~--~~~-~~~~~~~------~~g~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 275 (451)
.+..+. ... .....++ ..+..+++|.. ++..+++|......... ..+..+ .+...+. .+
T Consensus 245 ~~~v~~~~~~~~~~~~~~g~~~~~~~~gg~~~~~~~~~~~~~~vg~~~~~~~~~~--~~~~~~---~l~~~~~---~p-- 314 (584)
T 2gmh_A 245 LWVIDEKKWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLLALGFVVGLDYQNP--YLSPFR---EFQRWKH---HP-- 314 (584)
T ss_dssp EEECCGGGCCTTEEEEEEETTSCTTSCEEEEEEECCSSSCEEEEEEEEETTCCCT--TCCHHH---HHHHHTT---ST--
T ss_pred heecCcccccCCeEEEEEeccccCCcCCceEEEEecCCCCeEEEEEEEecCcccc--cCChHH---HHHHHHh---Ch--
Confidence 222222 122 2222221 12345677887 77888888765432111 112211 1222110 00
Q ss_pred CCCCCCcccccccccCCcccccccccCCCcceeeecCcceeeecccccccccccCCEEEEcccccccCCcchhccccchH
Q 013000 276 KSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFG 355 (451)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~LvGDAAh~~~P~~g~G~~~al~ 355 (451)
.+..++... .... ...+..++......++|..+|++|||||||.++|+.|||+|+||+
T Consensus 315 ---------~i~~~l~~~------------~~~~-~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~Ai~ 372 (584)
T 2gmh_A 315 ---------SIKPTLEGG------------KRIA-YGARALNEGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMK 372 (584)
T ss_dssp ---------TTHHHHTTC------------EEEE-EEEEEEECCGGGGCCCCEETTEEECTTTTCCCBTTTTBCHHHHHH
T ss_pred ---------HHHHHhCCC------------eEEE-ecceEccCCCcccCCccccCCEEEEcccccccCccccccHHHHHH
Confidence 111111000 0000 001112333344567889999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCC-CCChHHH---HHHHHHhhchh-hHHHHHHHHHHHHhhcC
Q 013000 356 DASTLSRIIAEGIAVGA-DIGEASL---LKKYEAERKPA-NIVMMAVLDGFQKAYSV 407 (451)
Q Consensus 356 da~~La~~L~~~~~~~~-~~~~~~~---l~~Ye~~r~~~-~~~~~~~s~~~~~~~~~ 407 (451)
||..||++|..+++.+. .. +.+ |+.|+++|+++ +.+.+..++.+..+++.
T Consensus 373 da~~LA~~L~~~~~~g~~~~--~~a~~~L~~Ye~~r~~~~v~~~l~~~r~~~~~~~~ 427 (584)
T 2gmh_A 373 SGTLAAESIFNQLTSENLQS--KTIGLHVTEYEDNLKNSWVWKELYSVRNIRPSCHG 427 (584)
T ss_dssp HHHHHHHHHHHHHTCCCCCC--SSSSCCCTHHHHHHHTSHHHHHHHHTTTTTGGGGS
T ss_pred HHHHHHHHHHHHHHcCCcch--hhhhhhHHHHHHHHHHhHHHHHHHHHhChhHHHHH
Confidence 99999999999876431 11 343 89999999998 68888888888887754
No 26
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.96 E-value=1.2e-26 Score=238.04 Aligned_cols=317 Identities=12% Similarity=0.110 Sum_probs=205.1
Q ss_pred CcHHHHHHHhcC---CCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHH-HHHHCCCchh--hhhhhcccc
Q 013000 1 MVGMALACSLAS---MPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATIS-FFKEIGAWQY--VQQHRHAYF 74 (451)
Q Consensus 1 paGl~lA~~L~~---~~~~~g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~-~L~~lgl~~~--~~~~~~~~~ 74 (451)
|+|+++|+.|++ . |++|+|||+...++ .+.|..+.+++.. +|+.+|+.+. +........
T Consensus 15 ~aGl~aA~~La~~~~~----G~~V~liE~~~~~~-----------~~~g~~~~~~~~~~~l~~lG~~~~~~~~~~~~~~~ 79 (538)
T 2aqj_A 15 TAGWMAASYLVRALQQ----QANITLIESAAIPR-----------IGVGEATIPSLQKVFFDFLGIPEREWMPQVNGAFK 79 (538)
T ss_dssp HHHHHHHHHHHHHCCS----SCEEEEEECSSSCC-----------CCSCEECCTHHHHHTHHHHTCCHHHHGGGGTCEEE
T ss_pred HHHHHHHHHHHhhcCC----CCEEEEECCCCCCC-----------cCCCcccchhHHHHHHHHhCCCHHHHHHhcCchhh
Confidence 589999999999 6 89999999976551 2237888999999 9999998865 433222111
Q ss_pred cEEEE--Ee-------------CCCcce----eEee-----cC----CCC-------------------------Cccce
Q 013000 75 DKMQV--WD-------------YTGLGY----TKYN-----AR----DVN-------------------------KEILG 101 (451)
Q Consensus 75 ~~~~~--~~-------------~~~~~~----~~~~-----~~----~~~-------------------------~~~~~ 101 (451)
.++.+ |. ..+... ..+. .. ... ...++
T Consensus 80 ~g~~~~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 159 (538)
T 2aqj_A 80 AAIKFVNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTRQMSHA 159 (538)
T ss_dssp CEEEEESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCBCSCCE
T ss_pred CCccccCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCcCCCcc
Confidence 12222 11 111000 0000 00 000 12346
Q ss_pred eeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecC
Q 013000 102 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADG 181 (451)
Q Consensus 102 ~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG 181 (451)
+.++|..|.+.|.+.+.+.| ++++++ +|++++. ++ ++..+.|.+.+|+++.||+||+|||
T Consensus 160 ~~i~~~~l~~~L~~~a~~~g-v~~~~~-~v~~i~~-----------~~-------~g~~~~v~~~~g~~i~ad~vV~A~G 219 (538)
T 2aqj_A 160 WHFDAHLVADFLKRWAVERG-VNRVVD-EVVDVRL-----------NN-------RGYISNLLTKEGRTLEADLFIDCSG 219 (538)
T ss_dssp EEECHHHHHHHHHHHHHHTT-CEEEEC-CEEEEEE-----------CT-------TSCEEEEEETTSCEECCSEEEECCG
T ss_pred EEEeHHHHHHHHHHHHHHCC-CEEEEe-eEeEEEE-----------cC-------CCcEEEEEECCCcEEEeCEEEECCC
Confidence 88999999999999999876 999999 8999975 10 1234678888998899999999999
Q ss_pred CCChhhh-hhCCCCCCCc---ccCeEEEEEEeecC----CCCeeEEEecCCCcEEEeecCCCceEEEEEcCccchHHhhc
Q 013000 182 GKSRVRE-LAGFKTTGWS---YSQNAIICTVEHNK----ENYCAWQRFLPAGPIALLPIGDNFSNIVWTMNPKDASDCKS 253 (451)
Q Consensus 182 ~~S~vR~-~l~~~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 253 (451)
.+|.+|+ .++....... ....++...++... ........+.+.|++|++|+.++ ..+.+..... .
T Consensus 220 ~~s~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~-~~~g~v~~~~------~ 292 (538)
T 2aqj_A 220 MRGLLINQALKEPFIDMSDYLLCDSAVASAVPNDDARDGVEPYTSSIAMNSGWTWKIPMLGR-FGSGYVFSSH------F 292 (538)
T ss_dssp GGCCCCCCCTCCCEEECTTTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEEETTE-EEEEEEECTT------T
T ss_pred CchhhHHHHhCCCccccccccccceEEEEecccCCcccCCCCceeeeecCCceEEEecCCCc-eEEEEEEcCC------C
Confidence 9999954 4555432211 12233433443321 11222233568889999999874 3344433221 1
Q ss_pred CCHHHHHHHHHHhhccCCCCCCCCCCCCcccccccccCCcccccccccCCCcceeeecCcceeeecccccccccccCCEE
Q 013000 254 MNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYVSKRVV 333 (451)
Q Consensus 254 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ 333 (451)
.+.++..+.+...+.. . + . . ....+++.....++|..|||+
T Consensus 293 ~~~~~~~~~l~~~~~~-~-~--~--------------------------~---------~~~~~~~~~~~~~~~~~grvv 333 (538)
T 2aqj_A 293 TSRDQATADFLKLWGL-S-D--N--------------------------Q---------PLNQIKFRVGRNKRAWVNNCV 333 (538)
T ss_dssp SCHHHHHHHHHHHHTC-C-T--T--------------------------C---------CCEEEECCCEEESCSEETTEE
T ss_pred CChHHHHHHHHHHhcC-C-C--C--------------------------C---------CceEEeeccccccccccCCEE
Confidence 2445566666664431 0 0 0 0 001123333335667789999
Q ss_pred EEcccccccCCcchhccccchHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHHHHHHHHHHHHh
Q 013000 334 LIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQKA 404 (451)
Q Consensus 334 LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~~~~~s~~~~~~ 404 (451)
|||||||.++|+.|+|+|+|++||..|+++|.. +.. .+.+|+.|+++|++++.++..........
T Consensus 334 liGDAAh~~~P~~gqG~~~a~~da~~La~~L~~----~~~--~~~~l~~Y~~~~~~~~~~~~~~~~~~y~~ 398 (538)
T 2aqj_A 334 SIGLSSCFLEPLESTGIYFIYAALYQLVKHFPD----TSF--DPRLSDAFNAEIVHMFDDCRDFVQAHYFT 398 (538)
T ss_dssp ECGGGTEECCGGGSCHHHHHHHHHHHHHHTCCB----TTC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEcccccccCcchhccHHHHHHHHHHHHHHhhc----cCC--CHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999988752 112 37899999999999988887766555544
No 27
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.95 E-value=1.6e-26 Score=237.44 Aligned_cols=319 Identities=12% Similarity=0.134 Sum_probs=207.7
Q ss_pred CcHHHHHHHhcC---CCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHH-HHHHCCCchh--hhhhhcccc
Q 013000 1 MVGMALACSLAS---MPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATIS-FFKEIGAWQY--VQQHRHAYF 74 (451)
Q Consensus 1 paGl~lA~~L~~---~~~~~g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~-~L~~lgl~~~--~~~~~~~~~ 74 (451)
|||+++|+.|++ . |++|+|||+.+.++ .+.|..+.|++.. +|+.+|+.+. +........
T Consensus 35 ~aGl~aA~~La~~~~~----G~~V~liE~~~~~~-----------~~~g~~~~p~~~~~~l~~lGi~~~~~~~~~~~~~~ 99 (550)
T 2e4g_A 35 TAGWMAASYLGKALQG----TADITLLQAPDIPT-----------LGVGEATIPNLQTAFFDFLGIPEDEWMRECNASYK 99 (550)
T ss_dssp HHHHHHHHHHHHHTTT----SSEEEEEECCCCCC-----------CCCCEECCTHHHHHTHHHHTCCHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHhhcCC----CCcEEEEeCCCCCc-----------cceeeeechhHHHHHHHHhCCChHHHHHhcCCeEE
Confidence 589999999999 6 89999999987551 2237889999999 9999999876 443332111
Q ss_pred cEEEE--EeCC-------------Ccce-eEee-----------------------c-------------CCCC------
Q 013000 75 DKMQV--WDYT-------------GLGY-TKYN-----------------------A-------------RDVN------ 96 (451)
Q Consensus 75 ~~~~~--~~~~-------------~~~~-~~~~-----------------------~-------------~~~~------ 96 (451)
.++.+ |... +... ..+. . ....
T Consensus 100 ~g~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (550)
T 2e4g_A 100 VAIKFINWRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRSPRRL 179 (550)
T ss_dssp CEEEEESSSSCCCCCSSCCEETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBCSBCT
T ss_pred EeeeEeecccccccccccccccCCCCeeEecCCccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhhhHhh
Confidence 22222 2111 0000 0000 0 0000
Q ss_pred ----CccceeeechHHHHHHHHHHhhcC-CCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEE
Q 013000 97 ----KEILGCVVENKVLHSSLLSCMQNT-EFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSL 171 (451)
Q Consensus 97 ----~~~~~~~i~R~~L~~~L~~~~~~~-g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~ 171 (451)
...+++.++|..|.+.|.+.+.+. | ++++++ +|++++. ++ ++..+.|.+.+|+++
T Consensus 180 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~G-v~i~~~-~V~~i~~-----------~~-------~g~~~~v~~~~G~~i 239 (550)
T 2e4g_A 180 DGSKVTNYAWHFDAHLVADFLRRFATEKLG-VRHVED-RVEHVQR-----------DA-------NGNIESVRTATGRVF 239 (550)
T ss_dssp TSCBCSCCEEEECHHHHHHHHHHHHHHHSC-CEEEEC-CEEEEEE-----------CT-------TSCEEEEEETTSCEE
T ss_pred cCCCCCCcceEEcHHHHHHHHHHHHHhcCC-cEEEEC-eEeEEEE-----------cC-------CCCEEEEEECCCCEE
Confidence 133468899999999999999987 6 999999 9999975 10 123467888899899
Q ss_pred EeeEEEeecCCCChh-hhhhCCCCCCCc---ccCeEEEEEEeecC----CCCeeEEEecCCCcEEEeecCCCceEEEEEc
Q 013000 172 YAKLVVGADGGKSRV-RELAGFKTTGWS---YSQNAIICTVEHNK----ENYCAWQRFLPAGPIALLPIGDNFSNIVWTM 243 (451)
Q Consensus 172 ~adlvVgADG~~S~v-R~~l~~~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~ 243 (451)
.||+||+|||.+|.+ ++.++....... .....+...++... ..........+.|++|++|+.+. ..+.+..
T Consensus 240 ~ad~vI~A~G~~S~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ipl~~~-~~~g~v~ 318 (550)
T 2e4g_A 240 DADLFVDCSGFRGLLINKAMEEPFLDMSDHLLNDSAVATQVPHDDDANGVEPFTSAIAMKSGWTWKIPMLGR-FGTGYVY 318 (550)
T ss_dssp ECSEEEECCGGGCCCCCCCTCCCEEECTTTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEECSSE-EEEEEEE
T ss_pred ECCEEEECCCCchhhHHHHhCCCcccccccccccceEEEeecccCCcccCCCceeeeecCCceEEEccCCCc-cceEEEE
Confidence 999999999999999 566665532211 12223333333221 11222233457889999999873 3333333
Q ss_pred CccchHHhhcCCHHHHHHHHHHhhccCCCCCCCCCCCCcccccccccCCcccccccccCCCcceeeecCcceeeeccccc
Q 013000 244 NPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKH 323 (451)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (451)
... ..+.++..+.+...+. .. +. + .....+++....
T Consensus 319 ~~~------~~~~~~~~~~l~~~~~-~~-p~----------------------------l--------~~~~~i~~~~~~ 354 (550)
T 2e4g_A 319 SSR------FATEDEAVREFCEMWH-LD-PE----------------------------T--------QPLNRIRFRVGR 354 (550)
T ss_dssp CTT------TSCHHHHHHHHHHHTT-CC-TT----------------------------T--------SCCEEEECCCEE
T ss_pred ecC------CCChHHHHHHHHHhhC-cC-cc----------------------------c--------CCCceEEecCCC
Confidence 221 1244555666655442 00 00 0 000011222223
Q ss_pred ccccccCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHHHHHHHHHHHH
Q 013000 324 ANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQK 403 (451)
Q Consensus 324 ~~~~~~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~~~~~s~~~~~ 403 (451)
.+++..+|++|||||||.++|+.|||+++|++||..|+++|.. .. ..+.+|+.|+++|++++..+.........
T Consensus 355 ~~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~~----~~--~~~~~l~~Y~~~~~~~~~~i~~~~~~~y~ 428 (550)
T 2e4g_A 355 NRRAWVGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFPD----KS--LNPVLTARFNREIETMFDDTRDFIQAHFY 428 (550)
T ss_dssp ESCSEETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCCC----TT--CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhccc----cC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556679999999999999999999999999999999988753 11 23789999999999999999888777776
Q ss_pred hh
Q 013000 404 AY 405 (451)
Q Consensus 404 ~~ 405 (451)
+-
T Consensus 429 ~~ 430 (550)
T 2e4g_A 429 FS 430 (550)
T ss_dssp TC
T ss_pred hc
Confidence 54
No 28
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.93 E-value=5.5e-25 Score=219.36 Aligned_cols=362 Identities=11% Similarity=0.035 Sum_probs=206.7
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHHHHHHCCCchhhhhhhcccccEEEEE
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVW 80 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~~~~~~~~~~~~~~~~~~ 80 (451)
|+||++|+.|++ +|++|+||||++.+...+ .....+..+...++..++.+|+.. ... .......+.++
T Consensus 32 paGl~~A~~La~----~G~~V~viE~~~~~~~~~------g~~~~~~~~~~~~~~~~~~lg~~~-~~~-~~~~~~~~~~~ 99 (430)
T 3ihm_A 32 TAGLHLGLFLRQ----HDVDVTVYTDRKPDEYSG------LRLLNTVAHNAVTVQREVALDVNE-WPS-EEFGYFGHYYY 99 (430)
T ss_dssp HHHHHHHHHHHH----TTCEEEEEESCCGGGSTT------SCCCCCCCBCHHHHHHHHHTTCCC-SCH-HHHCEEEEEEE
T ss_pred HHHHHHHHHHHH----CCCeEEEEcCCChHhhcc------cccccchhccchhhhhhhhcChhh-hhh-hcccccceeEE
Confidence 689999999999 499999999997542110 011113345677788888887521 111 11234555554
Q ss_pred eCCCcceeEeecCCCCCccceeeechHHHHHHHHHHhhcCCCceEEcCC-eeEEEEeCCCCCCcccCCCCCccccccCCC
Q 013000 81 DYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPS-RLTSMALLPSSSSISVDSTPSATTLFTKGH 159 (451)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (451)
..... ...+... ...+++.+++..+...|.+.+.+.| +++++.. .+.+++.
T Consensus 100 ~~~~~-~~~~~~~---~~~~~~~v~~~~l~~~L~~~~~~~G-v~v~~~~v~~~~l~~----------------------- 151 (430)
T 3ihm_A 100 VGGPQ-PMRFYGD---LKAPSRAVDYRLYQPMLMRALEARG-GKFCYDAVSAEDLEG----------------------- 151 (430)
T ss_dssp ECSSS-CEEEEEE---EEEEEBEECHHHHHHHHHHHHHHTT-CEEEECCCCGGGHHH-----------------------
T ss_pred ECCCC-ccccchh---cCCcceeecHHHHHHHHHHHHHHcC-CEEEEEecchhhhhh-----------------------
Confidence 43322 2333211 1234578999999999999999887 7887732 1122211
Q ss_pred eeEEEeCCCcEEEeeEEEeecCCCChhhhhhCCC-CCCCcccCe-EEEEEEe-ec--CCCCeeEEEecCCCcEEEeecC-
Q 013000 160 LAKLDLSDGTSLYAKLVVGADGGKSRVRELAGFK-TTGWSYSQN-AIICTVE-HN--KENYCAWQRFLPAGPIALLPIG- 233 (451)
Q Consensus 160 ~v~v~~~dg~~~~adlvVgADG~~S~vR~~l~~~-~~~~~~~~~-~~~~~~~-~~--~~~~~~~~~~~~~g~~~~~p~~- 233 (451)
....+|+||+|||.+|.+|...... ......... .....+. .. ......+..+...|.++++|..
T Consensus 152 ---------~~~~ad~VV~AdG~~S~~~~~~~~~~~~~~~~p~r~~~~~~~~g~~~~~~~~~~~~~~~~~G~~~~~p~~~ 222 (430)
T 3ihm_A 152 ---------LSEQYDLLVVCTGKYALGKVFEKQSENSPFEKPQRALCVGLFKGIKEAPIRAVTMSFSPGHGELIEIPTLS 222 (430)
T ss_dssp ---------HHTTSSEEEECCCCTTGGGGSCBCGGGCCCSSCSSEEEEEEEESBCCCSSCCEEEEEETTTEEEEEEEEEE
T ss_pred ---------hcccCCEEEECCCCcchHHhccCCCCCCcccCCCeeEEEEEEccCCCCCcCeeeeeecCCCcceEEecccC
Confidence 0125899999999999997543211 111112211 1111111 11 1123444555566788888852
Q ss_pred -CCc--eEEEEEcCccchHHhhcC----CHHHHHHHHHHhhccCCCCCCCCCCCCcccccccccCCcccccccccCCCcc
Q 013000 234 -DNF--SNIVWTMNPKDASDCKSM----NEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPR 306 (451)
Q Consensus 234 -~~~--~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (451)
++. ..++|..+......+... +++++.+.+.+.+. +|.+. ..+.+... .+. ....+..
T Consensus 223 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~----~~~---~~d~~~~ 287 (430)
T 3ihm_A 223 FNGMSTALVLENHIGSDLEVLAHTKYDDDPRAFLDLMLEKLG-KHHPS-------VAERIDPA----EFD---LANSSLD 287 (430)
T ss_dssp TTEEEEEEEEEECTTSSSGGGGTSCTTTCHHHHHHHHHHHHH-HHCHH-------HHTTBCTT----TCE---ESSSTTS
T ss_pred CCcceEEEEEEecCCCcHHHhccccCCCCHHHHHHHHHHHHH-HhCcc-------HHHHHhhc----hhc---cccCccc
Confidence 222 233455554333333332 66766666665443 22111 00011110 000 0000000
Q ss_pred eeeecCcceeeecccccccccccCCEEE-EcccccccCCcchhccccchHHHHHHHHHHHHhhhcCCCCChHHHHHHHHH
Q 013000 307 VVKLASERMVFPLSLKHANNYVSKRVVL-IGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEA 385 (451)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~g~v~L-vGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~ 385 (451)
+.. ...||+......+|..|+++| +|||||.++|+.|||+|+||+||..|+++|... + + .+.+|..|+.
T Consensus 288 ~~~----~~~~~~~~~~~~~~~~~~~~ll~GDAah~~~p~~g~G~~~a~~da~~l~~~l~~~---~-~--~~~~~~~~~~ 357 (430)
T 3ihm_A 288 ILQ----GGVVPAFRDGHATLNNGKTIIGLGDIQATVDPVLGQGANMASYAAWILGEEILAH---S-V--YDLRFSEHLE 357 (430)
T ss_dssp EEE----ECCCCEEBCSEEECTTSCEEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHC---S-C--CSHHHHHHHH
T ss_pred eee----cceeecccccccccCCCCEEEEecCccccCCCchhhhHHHHHHHHHHHHHHHHhc---C-C--HHHHHHHHHH
Confidence 000 012444444567889999998 999999999999999999999999999999875 2 3 3789999999
Q ss_pred hhc-hhhHHHHHHHHHHHHhhcCCCchHHHHHHHHHHhhccChhHHHHHHHHhhCC
Q 013000 386 ERK-PANIVMMAVLDGFQKAYSVDFGPLNILRAAAFHGAQYISPLKRNIISYASGE 440 (451)
Q Consensus 386 ~r~-~~~~~~~~~s~~~~~~~~~~~~~~~~~r~~~~~~~~~~p~l~~~~~~~~~g~ 440 (451)
+|+ +++....+.++.+..-...+... + ..++..+...|.+.+.++..++.+
T Consensus 358 ~r~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~p 409 (430)
T 3ihm_A 358 RRRQDRVLCATRWTNFTLSALSALPPE---F-LAFLQILSQSREMADEFTDNFNYP 409 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCHH---H-HHHHHHHHHCHHHHHHHHHGGGCH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCcHH---H-HHHHHHHhhCHHHHHHHHHhCCCh
Confidence 998 66666655555554211112111 1 235555667888888888776653
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.82 E-value=9.1e-20 Score=184.60 Aligned_cols=303 Identities=17% Similarity=0.146 Sum_probs=173.5
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHHHHHHCCCchhhhhhhcccccEEEEE
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVW 80 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~~~~~~~~~~~~~~~~~~ 80 (451)
|+||++|+.|++ +|++|+|||+.+.+. ..+...+.+.+++.|+.+|+.+.... +
T Consensus 102 ~aGl~aA~~La~----~G~~V~liEk~~~~g-----------~~~~~~~~~~~~~~l~~~g~~~~~~~-----~------ 155 (497)
T 2bry_A 102 PCGLRAAVELAL----LGARVVLVEKRIKFS-----------RHNVLHLWPFTIHDLRALGAKKFYGR-----F------ 155 (497)
T ss_dssp HHHHHHHHHHHH----TTCEEEEEESCSSCC-----------CCCEEECCHHHHHHHHTTTHHHHCTT-----T------
T ss_pred HHHHHHHHHHHH----CCCeEEEEEeccccC-----------CCCcccCChhHHHHHHHcCCcccccc-----c------
Confidence 589999999999 499999999998661 12467789999999999887543210 0
Q ss_pred eCCCcceeEeecCCCCCccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCe
Q 013000 81 DYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL 160 (451)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (451)
. . .....+++..|.+.|.+.+.+.+ ++|+++++|++++. ..+ ++..
T Consensus 156 ----------~-----~-~~~~~~~~~~l~~~L~~~~~~~g-v~v~~~~~v~~i~~---------~~~--------~~~~ 201 (497)
T 2bry_A 156 ----------C-----T-GTLDHISIRQLQLLLLKVALLLG-VEIHWGVKFTGLQP---------PPR--------KGSG 201 (497)
T ss_dssp ----------T-----C-TTCCEEEHHHHHHHHHHHHHHTT-CEEEESCEEEEEEC---------CCS--------TTCC
T ss_pred ----------c-----c-cccccCCHHHHHHHHHHHHHhCC-CEEEeCCEEEEEEE---------ecC--------CCCE
Confidence 0 0 00135788999999999998876 99999999999975 100 1244
Q ss_pred eEEEe--C-CC--cEEEeeEEEeecCCCChhhhhhCCCCCCCc-ccCeEEEEEE-eecC----CCCeeEEEe----c---
Q 013000 161 AKLDL--S-DG--TSLYAKLVVGADGGKSRVRELAGFKTTGWS-YSQNAIICTV-EHNK----ENYCAWQRF----L--- 222 (451)
Q Consensus 161 v~v~~--~-dg--~~~~adlvVgADG~~S~vR~~l~~~~~~~~-~~~~~~~~~~-~~~~----~~~~~~~~~----~--- 222 (451)
+.|++ . +| .++.+|+||+|||.+|.+|+..+....... +........+ .... +.......+ .
T Consensus 202 ~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~G~~~~~~~~~f~~~ 281 (497)
T 2bry_A 202 WRAQLQPNPPAQLASYEFDVLISAAGGKFVPEGFTIREMRGKLAIGITANFVNGRTVEETQVPEISGVARIYNQKFFQSL 281 (497)
T ss_dssp BEEEEESCCCHHHHTCCBSEEEECCCTTCCCTTCEEEEEECSCCEEEEEEEECCCCHHHHTSCCBCC----CCSSHHHHH
T ss_pred EEEEEEECCCCCEEEEEcCEEEECCCCCcccccccchhhcCceeEeeeeeeeeeccccccchhhcCceEEecChhhhHhH
Confidence 66666 4 66 479999999999999999987655433322 1111111111 0000 000000000 0
Q ss_pred --CCC-cE-EEeecCCCceEEEEE-------------cCccchHHhh---cCCHHHHHHHHH--HhhccCCCCCCCCCCC
Q 013000 223 --PAG-PI-ALLPIGDNFSNIVWT-------------MNPKDASDCK---SMNEDDFVKILN--HALDYGYGPHPKSISS 280 (451)
Q Consensus 223 --~~g-~~-~~~p~~~~~~~~~~~-------------~~~~~~~~~~---~~~~~~~~~~l~--~~~~~~~~~~~~~~~~ 280 (451)
..| .. .+.|.+++...++.. .......... ..+.+++..... ..+.....
T Consensus 282 ~~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 353 (497)
T 2bry_A 282 LKATGIDLENIVYYKDETHYFVMTAKKQCLLRLGVLRQDLSETDQLLGKANVVPEALQRFARAAADFATHGK-------- 353 (497)
T ss_dssp HHHHCCCEEEEEEEESSEEEEEEEECHHHHHHTTSBSSCCSSHHHHTSTTTBCHHHHHHHHHHHHHHHTTTT--------
T ss_pred HhhcCCCcccccccCCCeEEEEeccccccccccceeeccccchHhhhhhccCCHHHHHHhhccccccchhhc--------
Confidence 011 11 133333332222111 1111011011 113333322111 11110000
Q ss_pred Ccccccc---cccCCcccccccccCCCcceeeecCcceeeecccccccccccCC-EEEEccccc-ccCCcchhccccchH
Q 013000 281 GSVDMFS---WFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYVSKR-VVLIGDAAH-TVHPLAGQGVNLGFG 355 (451)
Q Consensus 281 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-v~LvGDAAh-~~~P~~g~G~~~al~ 355 (451)
...++ ...+. +..-..-......|+++.+.+++|..|| ++|+||||| .+.| .|||+|++|+
T Consensus 354 --~~~~~~~~~~~g~-----------~~~~~~~~~~~~~~~~~~r~a~~~~~gRr~~l~Gda~~~~~~p-~g~G~n~g~~ 419 (497)
T 2bry_A 354 --LGKLEFAQDARGR-----------PDVAAFDFTSMMRAESSARVQEKHGARLLLGLVGDCLVEPFWP-LGTGVARGFL 419 (497)
T ss_dssp --TCSCCBCBCTTSS-----------BCEEEEECSEEEEESCSEEEEEETTEEEEEEECGGGTBCCCGG-GCCHHHHHHH
T ss_pred --cccchhhhhccCC-----------CCCceeeeEEEEecchhhHHHHhcCCcccceEeccccccCcCc-cccchhhHHH
Confidence 00011 11110 0000101233446888889999999998 999999999 4555 9999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhH
Q 013000 356 DASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANI 392 (451)
Q Consensus 356 da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~ 392 (451)
||..|+++|...++.. .....| .+|++.+.
T Consensus 420 ~a~~l~~~l~~~~~g~---~~~~~l----~~r~~~~~ 449 (497)
T 2bry_A 420 AAFDAAWMVKRWAEGA---GPLEVL----AERESLYQ 449 (497)
T ss_dssp HHHHHHHHHHHHHTTC---CHHHHH----HHHHHHHT
T ss_pred HHHHHHHHHHHHhCCC---Cccchh----hhHHHHhh
Confidence 9999999999885432 234555 66665444
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.69 E-value=1.9e-15 Score=145.20 Aligned_cols=194 Identities=12% Similarity=0.038 Sum_probs=118.7
Q ss_pred CceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEE-EeeEEEeecCCCChhhhhhCCC-----CC
Q 013000 122 FQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSL-YAKLVVGADGGKSRVRELAGFK-----TT 195 (451)
Q Consensus 122 ~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~-~adlvVgADG~~S~vR~~l~~~-----~~ 195 (451)
+++|+++++|++++. .++++.|++.+|+.. .+|+||+|||.+|.+|.....+ ..
T Consensus 119 g~~i~~~~~v~~i~~--------------------~~~~~~v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~~~~l~~~~~ 178 (336)
T 1yvv_A 119 DMPVSFSCRITEVFR--------------------GEEHWNLLDAEGQNHGPFSHVIIATPAPQASTLLAAAPKLASVVA 178 (336)
T ss_dssp TCCEECSCCEEEEEE--------------------CSSCEEEEETTSCEEEEESEEEECSCHHHHGGGGTTCHHHHHHHT
T ss_pred cCcEEecCEEEEEEE--------------------eCCEEEEEeCCCcCccccCEEEEcCCHHHHHHhhccCHHHHHHHh
Confidence 389999999999987 456788999999865 4999999999999998653321 11
Q ss_pred CCcccCeEEEEEEeecCCC-CeeEEEecCCCcEEEe------ecCCCc-eEEEEEcCccchHHhhcCCHHHHHHHHHHhh
Q 013000 196 GWSYSQNAIICTVEHNKEN-YCAWQRFLPAGPIALL------PIGDNF-SNIVWTMNPKDASDCKSMNEDDFVKILNHAL 267 (451)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~------p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 267 (451)
...+. ..+...+..+.+. ......+.+.+++.++ |...+. ..++|.............+.+++.+.+.+.+
T Consensus 179 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l 257 (336)
T 1yvv_A 179 GVKMD-PTWAVALAFETPLQTPMQGCFVQDSPLDWLARNRSKPERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAF 257 (336)
T ss_dssp TCCEE-EEEEEEEEESSCCSCCCCEEEECSSSEEEEEEGGGSTTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHH
T ss_pred hcCcc-ceeEEEEEecCCCCCCCCeEEeCCCceeEEEecCcCCCCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHH
Confidence 22232 3333444444333 1222334456665554 444443 5678887665555556678888888888866
Q ss_pred ccCCCCCCCCCCCCcccccccccCCcccccccccCCCcceeeecCcceeeecccccc-ccc-ccCCEEEEcccccccCCc
Q 013000 268 DYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHA-NNY-VSKRVVLIGDAAHTVHPL 345 (451)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~g~v~LvGDAAh~~~P~ 345 (451)
..-++.... .+.......+...+|...... ..| ..+|++|+|||+|.
T Consensus 258 ~~~lg~~~~---------------------------~p~~~~~~rw~~a~~~~~~~~~~~~~~~~rl~laGDa~~g---- 306 (336)
T 1yvv_A 258 AELIDCTMP---------------------------APVFSLAHRWLYARPAGAHEWGALSDADLGIYVCGDWCLS---- 306 (336)
T ss_dssp HTTCSSCCC---------------------------CCSEEEEEEEEEEEESSCCCCSCEEETTTTEEECCGGGTT----
T ss_pred HHHhCCCCC---------------------------CCcEEEccccCccCCCCCCCCCeeecCCCCEEEEecCCCC----
Confidence 533332100 011111111111122221111 112 24899999999974
Q ss_pred chhccccchHHHHHHHHHHHHhhh
Q 013000 346 AGQGVNLGFGDASTLSRIIAEGIA 369 (451)
Q Consensus 346 ~g~G~~~al~da~~La~~L~~~~~ 369 (451)
.|++.|+.||..||+.|...+.
T Consensus 307 --~gv~~a~~sg~~lA~~l~~~~~ 328 (336)
T 1yvv_A 307 --GRVEGAWLSGQEAARRLLEHLQ 328 (336)
T ss_dssp --SSHHHHHHHHHHHHHHHHHHTT
T ss_pred --CCHHHHHHHHHHHHHHHHHHhh
Confidence 4999999999999999988764
No 31
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.04 E-value=2.2e-09 Score=104.67 Aligned_cols=193 Identities=13% Similarity=0.087 Sum_probs=112.0
Q ss_pred eeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecC
Q 013000 102 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADG 181 (451)
Q Consensus 102 ~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG 181 (451)
..++...+.+.|.+.+.+.| ++++.+++|++++. .++.+.|...+| ++.||.||.|+|
T Consensus 159 ~~~~~~~~~~~l~~~~~~~g-~~i~~~~~v~~i~~--------------------~~~~~~v~~~~g-~~~a~~vV~A~G 216 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKMLG-AEIFEHTPVLHVER--------------------DGEALFIKTPSG-DVWANHVVVASG 216 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHTT-CEEETTCCCCEEEC--------------------SSSSEEEEETTE-EEEEEEEEECCG
T ss_pred eEEcHHHHHHHHHHHHHHCC-CEEEcCCcEEEEEE--------------------ECCEEEEEcCCc-eEEcCEEEECCC
Confidence 34677899999999999887 89999999999976 334567887777 799999999999
Q ss_pred CCCh-hhhhhCCCCCCCcccCeEEEEEEeecCCC-CeeEEEecCCCcEEEeecCCCceEEEEEcCccchHHhhcCCH---
Q 013000 182 GKSR-VRELAGFKTTGWSYSQNAIICTVEHNKEN-YCAWQRFLPAGPIALLPIGDNFSNIVWTMNPKDASDCKSMNE--- 256 (451)
Q Consensus 182 ~~S~-vR~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--- 256 (451)
.+|. +.+.++....... .......++..... ... .+. ...+++|..++...+........ .....+.
T Consensus 217 ~~s~~l~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~--~~~--~~~~~~p~~~g~~~vG~~~~~~~--~~~~~~~~~~ 288 (382)
T 1ryi_A 217 VWSGMFFKQLGLNNAFLP--VKGECLSVWNDDIPLTKT--LYH--DHCYIVPRKSGRLVVGATMKPGD--WSETPDLGGL 288 (382)
T ss_dssp GGTHHHHHHTTCCCCCEE--EEEEEEEEECCSSCCCSE--EEE--TTEEEEECTTSEEEEECCCEETC--CCCSCCHHHH
T ss_pred hhHHHHHHhcCCCCceec--cceEEEEECCCCCCccce--EEc--CCEEEEEcCCCeEEEeecccccC--CCCCCCHHHH
Confidence 9997 7777765432211 12222222222111 111 121 35778887766544432211110 0011122
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCcccccccccCCcccccccccCCCcceeeecCcceeeecccccccccccCCEEEEc
Q 013000 257 DDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIG 336 (451)
Q Consensus 257 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~LvG 336 (451)
+.+.+.+...++ . +.. .... ..|. -...+..++..++|
T Consensus 289 ~~l~~~~~~~~p-~---------------l~~-------------------~~~~---~~w~----g~~~~t~d~~p~ig 326 (382)
T 1ryi_A 289 ESVMKKAKTMLP-A---------------IQN-------------------MKVD---RFWA----GLRPGTKDGKPYIG 326 (382)
T ss_dssp HHHHHHHHHHCG-G---------------GGG-------------------SEEE---EEEE----EEEEECSSSCCEEE
T ss_pred HHHHHHHHHhCC-C---------------cCC-------------------Ccee---eEEE----EecccCCCCCcEec
Confidence 233344444332 0 000 0000 0110 01122345677788
Q ss_pred ccc-----cccCCcchhccccchHHHHHHHHHHHH
Q 013000 337 DAA-----HTVHPLAGQGVNLGFGDASTLSRIIAE 366 (451)
Q Consensus 337 DAA-----h~~~P~~g~G~~~al~da~~La~~L~~ 366 (451)
++. ....+++|.|+.+|...|..+|+.|..
T Consensus 327 ~~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~~ 361 (382)
T 1ryi_A 327 RHPEDSRILFAAGHFRNGILLAPATGALISDLIMN 361 (382)
T ss_dssp EETTEEEEEEEECCSSCTTTTHHHHHHHHHHHHTT
T ss_pred cCCCcCCEEEEEcCCcchHHHhHHHHHHHHHHHhC
Confidence 763 446778999999999999999988753
No 32
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.01 E-value=1.4e-08 Score=99.57 Aligned_cols=116 Identities=12% Similarity=0.048 Sum_probs=75.6
Q ss_pred eechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCC
Q 013000 103 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGG 182 (451)
Q Consensus 103 ~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~ 182 (451)
.++-..+.+.|.+.+.+.| ++++++++|++++. +++..+.|...+| ++.+|.||.|+|.
T Consensus 170 ~~~~~~~~~~l~~~~~~~g-~~i~~~~~v~~i~~-------------------~~~~~~~v~~~~g-~~~a~~vV~a~G~ 228 (405)
T 2gag_B 170 IAKHDHVAWAFARKANEMG-VDIIQNCEVTGFIK-------------------DGEKVTGVKTTRG-TIHAGKVALAGAG 228 (405)
T ss_dssp BCCHHHHHHHHHHHHHHTT-CEEECSCCEEEEEE-------------------SSSBEEEEEETTC-CEEEEEEEECCGG
T ss_pred cCCHHHHHHHHHHHHHHCC-CEEEcCCeEEEEEE-------------------eCCEEEEEEeCCc-eEECCEEEECCch
Confidence 3555689999999999886 99999999999976 1223466777788 7999999999999
Q ss_pred CC-hhhhhhCCCCCCCcccCeEEEEEEeecCCCCeeEEEecCCCcEEEeecCCCceEEEEE
Q 013000 183 KS-RVRELAGFKTTGWSYSQNAIICTVEHNKENYCAWQRFLPAGPIALLPIGDNFSNIVWT 242 (451)
Q Consensus 183 ~S-~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~ 242 (451)
+| .+++.++.......+....+... +........+ +.....+++.|..++...+...
T Consensus 229 ~s~~l~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~y~~p~~~g~~~ig~~ 286 (405)
T 2gag_B 229 HSSVLAEMAGFELPIQSHPLQALVSE-LFEPVHPTVV--MSNHIHVYVSQAHKGELVMGAG 286 (405)
T ss_dssp GHHHHHHHHTCCCCEEEEEEEEEEEE-EBCSCCCSEE--EETTTTEEEEECTTSEEEEEEE
T ss_pred hHHHHHHHcCCCCCccccceeEEEec-CCccccCceE--EeCCCcEEEEEcCCCcEEEEec
Confidence 98 68888876543222222221111 1111111111 2344667788877766555544
No 33
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.91 E-value=1.2e-07 Score=92.92 Aligned_cols=69 Identities=16% Similarity=0.109 Sum_probs=56.4
Q ss_pred eechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCC
Q 013000 103 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGG 182 (451)
Q Consensus 103 ~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~ 182 (451)
.++...+.+.|.+.+.+.| ++|+++++|++++. .++.+.|...+| ++.||.||.|+|.
T Consensus 149 ~~~~~~~~~~l~~~a~~~G-v~i~~~~~V~~i~~--------------------~~~~v~v~t~~g-~i~a~~VV~A~G~ 206 (397)
T 2oln_A 149 TIDVRGTLAALFTLAQAAG-ATLRAGETVTELVP--------------------DADGVSVTTDRG-TYRAGKVVLACGP 206 (397)
T ss_dssp EEEHHHHHHHHHHHHHHTT-CEEEESCCEEEEEE--------------------ETTEEEEEESSC-EEEEEEEEECCGG
T ss_pred EEcHHHHHHHHHHHHHHcC-CEEECCCEEEEEEE--------------------cCCeEEEEECCC-EEEcCEEEEcCCc
Confidence 4667789999999998887 99999999999976 345677877665 7999999999999
Q ss_pred C-ChhhhhhCCC
Q 013000 183 K-SRVRELAGFK 193 (451)
Q Consensus 183 ~-S~vR~~l~~~ 193 (451)
+ +.+++.++..
T Consensus 207 ~s~~l~~~~g~~ 218 (397)
T 2oln_A 207 YTNDLLEPLGAR 218 (397)
T ss_dssp GHHHHHGGGTCC
T ss_pred ChHHHhhhcCCC
Confidence 8 4577777653
No 34
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.89 E-value=8.2e-08 Score=93.41 Aligned_cols=69 Identities=13% Similarity=0.176 Sum_probs=57.4
Q ss_pred eechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeE-EEeCCCcEEEeeEEEeecC
Q 013000 103 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAK-LDLSDGTSLYAKLVVGADG 181 (451)
Q Consensus 103 ~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-v~~~dg~~~~adlvVgADG 181 (451)
.++...+.+.|.+.+++.| ++|+.+++|++++. .++.+. |...+| ++.||.||.|+|
T Consensus 145 ~~~~~~l~~~l~~~~~~~G-v~i~~~~~v~~i~~--------------------~~~~v~gv~~~~g-~i~a~~VV~A~G 202 (382)
T 1y56_B 145 KADPFEATTAFAVKAKEYG-AKLLEYTEVKGFLI--------------------ENNEIKGVKTNKG-IIKTGIVVNATN 202 (382)
T ss_dssp EECHHHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------SSSBEEEEEETTE-EEECSEEEECCG
T ss_pred eECHHHHHHHHHHHHHHCC-CEEECCceEEEEEE--------------------ECCEEEEEEECCc-EEECCEEEECcc
Confidence 4678899999999999887 99999999999976 334555 887777 799999999999
Q ss_pred CCC-hhhhhhCCC
Q 013000 182 GKS-RVRELAGFK 193 (451)
Q Consensus 182 ~~S-~vR~~l~~~ 193 (451)
.+| .+.+.++..
T Consensus 203 ~~s~~l~~~~g~~ 215 (382)
T 1y56_B 203 AWANLINAMAGIK 215 (382)
T ss_dssp GGHHHHHHHHTCC
T ss_pred hhHHHHHHHcCCC
Confidence 998 467777654
No 35
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.88 E-value=9.6e-08 Score=93.08 Aligned_cols=67 Identities=12% Similarity=0.132 Sum_probs=54.6
Q ss_pred eechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCC
Q 013000 103 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGG 182 (451)
Q Consensus 103 ~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~ 182 (451)
.++...+.+.|.+.+++.| ++++++++|++++. .++.+.|...+| ++.||.||.|+|.
T Consensus 146 ~~~~~~~~~~l~~~~~~~G-v~i~~~~~v~~i~~--------------------~~~~~~v~~~~g-~~~a~~vV~A~G~ 203 (389)
T 2gf3_A 146 VLFSENCIRAYRELAEARG-AKVLTHTRVEDFDI--------------------SPDSVKIETANG-SYTADKLIVSMGA 203 (389)
T ss_dssp EEEHHHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------CSSCEEEEETTE-EEEEEEEEECCGG
T ss_pred EEeHHHHHHHHHHHHHHCC-CEEEcCcEEEEEEe--------------------cCCeEEEEeCCC-EEEeCEEEEecCc
Confidence 4667899999999999987 99999999999976 334577877666 7999999999999
Q ss_pred CCh-hhhhhC
Q 013000 183 KSR-VRELAG 191 (451)
Q Consensus 183 ~S~-vR~~l~ 191 (451)
+|. +.+.++
T Consensus 204 ~~~~l~~~~g 213 (389)
T 2gf3_A 204 WNSKLLSKLN 213 (389)
T ss_dssp GHHHHGGGGT
T ss_pred cHHHHhhhhc
Confidence 875 445554
No 36
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.87 E-value=9.9e-09 Score=99.77 Aligned_cols=70 Identities=17% Similarity=0.268 Sum_probs=59.3
Q ss_pred eeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecC
Q 013000 102 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADG 181 (451)
Q Consensus 102 ~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG 181 (451)
..++...+.+.|.+.+++.| ++|+++++|++++. .++.+.|...+| ++.||.||.|+|
T Consensus 149 ~~~~~~~~~~~l~~~a~~~G-v~i~~~~~V~~i~~--------------------~~~~~~V~t~~g-~i~a~~VV~A~G 206 (381)
T 3nyc_A 149 ADIDTDALHQGYLRGIRRNQ-GQVLCNHEALEIRR--------------------VDGAWEVRCDAG-SYRAAVLVNAAG 206 (381)
T ss_dssp EEECHHHHHHHHHHHHHHTT-CEEESSCCCCEEEE--------------------ETTEEEEECSSE-EEEESEEEECCG
T ss_pred ceECHHHHHHHHHHHHHHCC-CEEEcCCEEEEEEE--------------------eCCeEEEEeCCC-EEEcCEEEECCC
Confidence 34777899999999999987 99999999999976 445688888888 799999999999
Q ss_pred CCCh-hhhhhCCC
Q 013000 182 GKSR-VRELAGFK 193 (451)
Q Consensus 182 ~~S~-vR~~l~~~ 193 (451)
.+|. +.+.++..
T Consensus 207 ~~s~~l~~~~g~~ 219 (381)
T 3nyc_A 207 AWCDAIAGLAGVR 219 (381)
T ss_dssp GGHHHHHHHHTCC
T ss_pred hhHHHHHHHhCCC
Confidence 9984 67777754
No 37
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.85 E-value=1.2e-08 Score=107.06 Aligned_cols=69 Identities=16% Similarity=0.143 Sum_probs=58.1
Q ss_pred eeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecC
Q 013000 102 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADG 181 (451)
Q Consensus 102 ~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG 181 (451)
..++...+.+.|.+.+++.| ++|+++++|++++. .++.+.|...+|.++.||.||.|+|
T Consensus 412 g~v~p~~l~~aL~~~a~~~G-v~i~~~t~V~~l~~--------------------~~~~v~V~t~~G~~i~Ad~VVlAtG 470 (676)
T 3ps9_A 412 GWLCPAELTRNVLELAQQQG-LQIYYQYQLQNFSR--------------------KDDCWLLNFAGDQQATHSVVVLANG 470 (676)
T ss_dssp EEECHHHHHHHHHHHHHHTT-CEEEESCCEEEEEE--------------------ETTEEEEEETTSCEEEESEEEECCG
T ss_pred eeeCHHHHHHHHHHHHHhCC-CEEEeCCeeeEEEE--------------------eCCeEEEEECCCCEEECCEEEECCC
Confidence 45677899999999999987 99999999999987 4566889998988899999999999
Q ss_pred CCCh-hhhhhC
Q 013000 182 GKSR-VRELAG 191 (451)
Q Consensus 182 ~~S~-vR~~l~ 191 (451)
.+|. +.+..+
T Consensus 471 ~~s~~l~~~~~ 481 (676)
T 3ps9_A 471 HQISRFSQTST 481 (676)
T ss_dssp GGGGCSTTTTT
T ss_pred cchhccccccC
Confidence 9986 444333
No 38
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.80 E-value=4.1e-07 Score=83.40 Aligned_cols=37 Identities=14% Similarity=0.153 Sum_probs=33.0
Q ss_pred ccCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhc
Q 013000 328 VSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAV 370 (451)
Q Consensus 328 ~~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~ 370 (451)
..+||+|+|||+ .|.|++.||.||..+|+.|.++|+.
T Consensus 293 ~~~~v~l~GDa~------~g~gv~~A~~sG~~aA~~I~~~L~~ 329 (336)
T 3kkj_A 293 ADLGIYVCGDWC------LSGRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp TTTTEEECCGGG------TTSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEeccc------CCcCHHHHHHHHHHHHHHHHHHhhc
Confidence 468999999996 4789999999999999999998874
No 39
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.78 E-value=1e-08 Score=103.89 Aligned_cols=70 Identities=16% Similarity=0.278 Sum_probs=56.0
Q ss_pred echHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCC
Q 013000 104 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 183 (451)
Q Consensus 104 i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 183 (451)
.....+.+.|.+.+.+.| ++|+++++|++++. +.+....|.+.+|+++.||+||.|||.+
T Consensus 217 ~~~~~l~~~L~~~l~~~G-v~I~~~t~V~~I~~-------------------~~~~v~gV~l~~G~~i~Ad~VVlA~G~~ 276 (549)
T 3nlc_A 217 FKLVTMIEKMRATIIELG-GEIRFSTRVDDLHM-------------------EDGQITGVTLSNGEEIKSRHVVLAVGHS 276 (549)
T ss_dssp HHHHHHHHHHHHHHHHTT-CEEESSCCEEEEEE-------------------SSSBEEEEEETTSCEEECSCEEECCCTT
T ss_pred chHHHHHHHHHHHHHhcC-CEEEeCCEEEEEEE-------------------eCCEEEEEEECCCCEEECCEEEECCCCC
Confidence 356788889999998886 99999999999976 1223455888999999999999999999
Q ss_pred Ch----hhhhhCCC
Q 013000 184 SR----VRELAGFK 193 (451)
Q Consensus 184 S~----vR~~l~~~ 193 (451)
|. ..+.++..
T Consensus 277 s~~~~~~l~~~Gi~ 290 (549)
T 3nlc_A 277 ARDTFEMLHERGVY 290 (549)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred hhhHHHHHHHcCCC
Confidence 95 44444554
No 40
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.76 E-value=1.3e-07 Score=99.29 Aligned_cols=68 Identities=13% Similarity=0.064 Sum_probs=55.9
Q ss_pred eeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCc-EEEeeEEEeec
Q 013000 102 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGT-SLYAKLVVGAD 180 (451)
Q Consensus 102 ~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~-~~~adlvVgAD 180 (451)
..++...|.+.|.+.+.+.| ++|+++++|++++. .++++.|...+|. ++.||.||.|+
T Consensus 407 g~v~p~~l~~aL~~~a~~~G-v~i~~~t~V~~l~~--------------------~~~~v~V~t~~G~~~i~Ad~VVlAt 465 (689)
T 3pvc_A 407 GWLCPSDLTHALMMLAQQNG-MTCHYQHELQRLKR--------------------IDSQWQLTFGQSQAAKHHATVILAT 465 (689)
T ss_dssp EEECHHHHHHHHHHHHHHTT-CEEEESCCEEEEEE--------------------CSSSEEEEEC-CCCCEEESEEEECC
T ss_pred eEECHHHHHHHHHHHHHhCC-CEEEeCCeEeEEEE--------------------eCCeEEEEeCCCcEEEECCEEEECC
Confidence 34677899999999999887 99999999999987 3455889888887 89999999999
Q ss_pred CCCCh-hhhhh
Q 013000 181 GGKSR-VRELA 190 (451)
Q Consensus 181 G~~S~-vR~~l 190 (451)
|.+|. +.+.+
T Consensus 466 G~~s~~l~~~~ 476 (689)
T 3pvc_A 466 GHRLPEWEQTH 476 (689)
T ss_dssp GGGTTCSTTTT
T ss_pred Ccchhcccccc
Confidence 99986 34433
No 41
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.71 E-value=2.1e-07 Score=94.07 Aligned_cols=116 Identities=16% Similarity=0.045 Sum_probs=73.3
Q ss_pred eechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEe---CCCc--EEEeeEEE
Q 013000 103 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDL---SDGT--SLYAKLVV 177 (451)
Q Consensus 103 ~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~---~dg~--~~~adlvV 177 (451)
.++...|...|.+.+.+.| ++++.+++|++++. .+..+.|.+ .+|+ ++.||.||
T Consensus 145 ~v~~~~l~~~l~~~a~~~G-v~i~~~~~V~~l~~--------------------~~~~~~V~~~d~~~G~~~~i~A~~VV 203 (501)
T 2qcu_A 145 WVDDARLVLANAQMVVRKG-GEVLTRTRATSARR--------------------ENGLWIVEAEDIDTGKKYSWQARGLV 203 (501)
T ss_dssp EECHHHHHHHHHHHHHHTT-CEEECSEEEEEEEE--------------------ETTEEEEEEEETTTCCEEEEEESCEE
T ss_pred EEcHHHHHHHHHHHHHHcC-CEEEcCcEEEEEEE--------------------eCCEEEEEEEECCCCCEEEEECCEEE
Confidence 4788999999999999987 89999999999976 335566766 3575 79999999
Q ss_pred eecCCCCh-hhhh-hCCCCCCCcccCeEEEEEEeecCCCCee-EEEecCCCcEEEeecCCCceEE
Q 013000 178 GADGGKSR-VREL-AGFKTTGWSYSQNAIICTVEHNKENYCA-WQRFLPAGPIALLPIGDNFSNI 239 (451)
Q Consensus 178 gADG~~S~-vR~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~p~~~~~~~~ 239 (451)
.|+|.+|. +++. ++......-.........++...+.... +....++..++++|..++...+
T Consensus 204 ~AtG~~s~~l~~~~l~~~~~~~i~p~rG~~~~~~~~~~~~~~~~~~~~dg~~~~~~P~~~g~~~i 268 (501)
T 2qcu_A 204 NATGPWVKQFFDDGMHLPSPYGIRLIKGSHIVVPRVHTQKQAYILQNEDKRIVFVIPWMDEFSII 268 (501)
T ss_dssp ECCGGGHHHHHHHHTCCCCSSCBCCEEEEEEEEECSSSCSCEEEEECTTSCEEEEEEETTTEEEE
T ss_pred ECCChhHHHHHHHhccCCcccccccceeEEEEECCCCCCceEEEeecCCCCEEEEEEcCCCcEEE
Confidence 99999986 5554 5432111112222222333322222222 1111234467888987665433
No 42
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.70 E-value=1.4e-07 Score=87.99 Aligned_cols=134 Identities=18% Similarity=0.224 Sum_probs=84.7
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHHHHHHCCCchhhhhhhcccccEEEEE
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVW 80 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~~~~~~~~~~~~~~~~~~ 80 (451)
|+||++|+.|+++ .|++|+||||.+.+....+.. ........+.....+.|+.+|+. +..
T Consensus 49 ~aGl~aA~~la~~---~G~~V~viEk~~~~gg~~~~~---~~~~~~~~~~~~~~~~l~~~G~~----------~~~---- 108 (284)
T 1rp0_A 49 SAGLSAAYEISKN---PNVQVAIIEQSVSPGGGAWLG---GQLFSAMIVRKPAHLFLDEIGVA----------YDE---- 108 (284)
T ss_dssp HHHHHHHHHHHTS---TTSCEEEEESSSSCCTTTTCC---STTCCCEEEETTTHHHHHHHTCC----------CEE----
T ss_pred HHHHHHHHHHHHc---CCCeEEEEECCCCCCCceecC---CcchHHHHcCcHHHHHHHHcCCC----------ccc----
Confidence 5899999999993 299999999998763221100 00011223334445555555431 100
Q ss_pred eCCCcceeEeecCCCCCccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCe
Q 013000 81 DYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL 160 (451)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (451)
.+ .+....++..+...|.+.+.+..+++++++++|+++.. .++.
T Consensus 109 --~~--------------~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~--------------------~~~~ 152 (284)
T 1rp0_A 109 --QD--------------TYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIV--------------------KGNR 152 (284)
T ss_dssp --CS--------------SEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEE--------------------ETTE
T ss_pred --CC--------------CEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEe--------------------cCCe
Confidence 00 01112367888889999887643499999999999976 2232
Q ss_pred e-EEEeC---------CC-----cEEEeeEEEeecCCCChhhhhh
Q 013000 161 A-KLDLS---------DG-----TSLYAKLVVGADGGKSRVRELA 190 (451)
Q Consensus 161 v-~v~~~---------dg-----~~~~adlvVgADG~~S~vR~~l 190 (451)
+ .|.+. +| .++.||.||.|+|.+|.++...
T Consensus 153 v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 153 VGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp EEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHH
T ss_pred EEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHH
Confidence 2 33331 32 4799999999999999988655
No 43
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.67 E-value=1.3e-08 Score=101.46 Aligned_cols=68 Identities=24% Similarity=0.239 Sum_probs=58.1
Q ss_pred hHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCe-eEEEeCCCcEEEeeEEEeecCCCC
Q 013000 106 NKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL-AKLDLSDGTSLYAKLVVGADGGKS 184 (451)
Q Consensus 106 R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~v~~~dg~~~~adlvVgADG~~S 184 (451)
...+.+.|.+.+.+.+ ++|+++++|+++.. .++. +.|.+.+|+++.||.||.|+|.+|
T Consensus 133 ~~~l~~~L~~~~~~~G-V~i~~~~~V~~i~~--------------------~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLG-VKIRTNTPVETIEY--------------------ENGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------ETTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCC-CEEEeCcEEEEEEe--------------------cCCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 5788899999998876 99999999999975 2344 778888998899999999999999
Q ss_pred -----------hhhhhhCCCC
Q 013000 185 -----------RVRELAGFKT 194 (451)
Q Consensus 185 -----------~vR~~l~~~~ 194 (451)
.+++.+|...
T Consensus 192 ~~~~g~tG~g~~la~~~G~~~ 212 (447)
T 2i0z_A 192 VPQTGSTGDGYAWAEKAGHTI 212 (447)
T ss_dssp SGGGSCSSHHHHHHHHTTCCE
T ss_pred CCCCCCCcHHHHHHHHCCCCc
Confidence 8888887653
No 44
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.67 E-value=9.1e-07 Score=85.24 Aligned_cols=72 Identities=13% Similarity=0.209 Sum_probs=59.1
Q ss_pred eeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCc--EEEeeEEEee
Q 013000 102 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGT--SLYAKLVVGA 179 (451)
Q Consensus 102 ~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~--~~~adlvVgA 179 (451)
..++...+.+.|.+.+++.| ++|+++++|++++. +.++.+.|...+|+ ++.||.||.|
T Consensus 145 ~~~~~~~~~~~l~~~~~~~G-v~i~~~~~v~~i~~-------------------~~~~~~~v~~~~g~~~~~~a~~VV~A 204 (369)
T 3dme_A 145 GIVDSHALMLAYQGDAESDG-AQLVFHTPLIAGRV-------------------RPEGGFELDFGGAEPMTLSCRVLINA 204 (369)
T ss_dssp EEECHHHHHHHHHHHHHHTT-CEEECSCCEEEEEE-------------------CTTSSEEEEECTTSCEEEEEEEEEEC
T ss_pred EEECHHHHHHHHHHHHHHCC-CEEECCCEEEEEEE-------------------cCCceEEEEECCCceeEEEeCEEEEC
Confidence 34777899999999999987 99999999999976 12234778888884 8999999999
Q ss_pred cCCCC-hhhhhh-CCC
Q 013000 180 DGGKS-RVRELA-GFK 193 (451)
Q Consensus 180 DG~~S-~vR~~l-~~~ 193 (451)
+|.+| .+.+.+ +.+
T Consensus 205 ~G~~s~~l~~~~~g~~ 220 (369)
T 3dme_A 205 AGLHAPGLARRIEGIP 220 (369)
T ss_dssp CGGGHHHHHHTEETSC
T ss_pred CCcchHHHHHHhcCCC
Confidence 99998 466777 654
No 45
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.66 E-value=8.3e-08 Score=94.45 Aligned_cols=68 Identities=22% Similarity=0.252 Sum_probs=57.6
Q ss_pred echHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCC
Q 013000 104 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 183 (451)
Q Consensus 104 i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 183 (451)
..+..+.+.|.+.+.+.+ ++|+++++|++++. .++.+.|.+.+| ++.||.||.|+|.+
T Consensus 129 ~~~~~l~~~L~~~l~~~G-v~i~~~~~V~~i~~--------------------~~~~~~V~~~~g-~i~ad~VIlAtG~~ 186 (417)
T 3v76_A 129 HSAKDIIRMLMAEMKEAG-VQLRLETSIGEVER--------------------TASGFRVTTSAG-TVDAASLVVASGGK 186 (417)
T ss_dssp SCHHHHHHHHHHHHHHHT-CEEECSCCEEEEEE--------------------ETTEEEEEETTE-EEEESEEEECCCCS
T ss_pred CCHHHHHHHHHHHHHHCC-CEEEECCEEEEEEE--------------------eCCEEEEEECCc-EEEeeEEEECCCCc
Confidence 457899999999999886 99999999999976 445688988888 89999999999999
Q ss_pred C-----------hhhhhhCCC
Q 013000 184 S-----------RVRELAGFK 193 (451)
Q Consensus 184 S-----------~vR~~l~~~ 193 (451)
| .+.+.+|..
T Consensus 187 S~p~~gs~g~g~~la~~~G~~ 207 (417)
T 3v76_A 187 SIPKMGATGLAYRIAEQFGLP 207 (417)
T ss_dssp SCGGGTCCCHHHHHHHHTTCC
T ss_pred cCCCCCCCcHHHHHHHHCCCC
Confidence 9 466666644
No 46
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.62 E-value=9.9e-08 Score=90.37 Aligned_cols=152 Identities=14% Similarity=0.178 Sum_probs=87.5
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHHHHHHCCCchhhhhhhcccccEEEEE
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVW 80 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~~~~~~~~~~~~~~~~~~ 80 (451)
|+||++|+.|++.. .|++|+|||+.+.+....+. .........+.+.....|+.+|+.-.
T Consensus 89 ~AGL~aA~~La~~~--~G~~V~LiEk~~~~GGg~~~---~g~~~~~~~~~~~~~~~L~~~Gv~~~--------------- 148 (344)
T 3jsk_A 89 SCGLSAAYVLSTLR--PDLRITIVEAGVAPGGGAWL---GGQLFSAMVMRKPADVFLDEVGVPYE--------------- 148 (344)
T ss_dssp HHHHHHHHHHHHHC--TTSCEEEEESSSSCCTTTTC---CBTTCCCEEEETTTHHHHHHHTCCCE---------------
T ss_pred HHHHHHHHHHHhcC--CCCEEEEEeCCCccCCcccc---CCccchhhhcchHHHHHHHHcCCccc---------------
Confidence 58999999999820 28999999999876422220 01112233445666777777765210
Q ss_pred eCCCcceeEeecCCCCCccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCC-cccCCCCCccccccCC-
Q 013000 81 DYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSS-ISVDSTPSATTLFTKG- 158 (451)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~- 158 (451)
. .+ .+....+..++.+.|.+.+.+..+++++++++|+++..+.+... .+...++.. .+.+
T Consensus 149 ~-~G--------------~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~---~~~g~ 210 (344)
T 3jsk_A 149 D-EG--------------DYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEA---EDEAK 210 (344)
T ss_dssp E-CS--------------SEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC-------------------CC
T ss_pred c-cC--------------CeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCccccccccccccc---ccCCC
Confidence 0 00 00112245788899999998865699999999999976221000 000000000 0011
Q ss_pred -C--eeEEEe----C--------CCcEEEeeEEEeecCCCChhhhhh
Q 013000 159 -H--LAKLDL----S--------DGTSLYAKLVVGADGGKSRVRELA 190 (451)
Q Consensus 159 -~--~v~v~~----~--------dg~~~~adlvVgADG~~S~vR~~l 190 (451)
. +|.+.. . ++.+++|++||+|+|..|++++.+
T Consensus 211 ~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~~ 257 (344)
T 3jsk_A 211 VRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAFS 257 (344)
T ss_dssp EEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCHH
T ss_pred ceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchhhHHH
Confidence 1 122221 1 234799999999999999965544
No 47
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.62 E-value=8.1e-07 Score=85.92 Aligned_cols=61 Identities=10% Similarity=0.190 Sum_probs=51.5
Q ss_pred eechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCC
Q 013000 103 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGG 182 (451)
Q Consensus 103 ~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~ 182 (451)
.++...+.+.|.+.+.+.| ++++.+++|++++. .++.+.|...+|+ +.||.||.|+|.
T Consensus 145 ~~~~~~l~~~l~~~~~~~G-~~i~~~~~V~~i~~--------------------~~~~~~v~~~~g~-~~a~~vV~a~G~ 202 (372)
T 2uzz_A 145 FLRSELAIKTWIQLAKEAG-CAQLFNCPVTAIRH--------------------DDDGVTIETADGE-YQAKKAIVCAGT 202 (372)
T ss_dssp EEEHHHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------CSSSEEEEESSCE-EEEEEEEECCGG
T ss_pred EEcHHHHHHHHHHHHHHCC-CEEEcCCEEEEEEE--------------------cCCEEEEEECCCe-EEcCEEEEcCCc
Confidence 4667789999999999887 89999999999976 3345788887775 999999999999
Q ss_pred CCh
Q 013000 183 KSR 185 (451)
Q Consensus 183 ~S~ 185 (451)
+|.
T Consensus 203 ~s~ 205 (372)
T 2uzz_A 203 WVK 205 (372)
T ss_dssp GGG
T ss_pred cHH
Confidence 874
No 48
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.60 E-value=1.5e-06 Score=86.82 Aligned_cols=56 Identities=20% Similarity=0.249 Sum_probs=43.2
Q ss_pred HHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCChh
Q 013000 108 VLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 186 (451)
Q Consensus 108 ~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 186 (451)
.|.+.|.+.+.+ ++|+++++|++++. .++++.|++.+|+++.||.||.|-+.....
T Consensus 236 ~l~~~l~~~l~~---~~i~~~~~V~~i~~--------------------~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~ 291 (470)
T 3i6d_A 236 TLVEEIEKQLKL---TKVYKGTKVTKLSH--------------------SGSCYSLELDNGVTLDADSVIVTAPHKAAA 291 (470)
T ss_dssp HHHHHHHHTCCS---EEEECSCCEEEEEE--------------------CSSSEEEEESSSCEEEESEEEECSCHHHHH
T ss_pred HHHHHHHHhcCC---CEEEeCCceEEEEE--------------------cCCeEEEEECCCCEEECCEEEECCCHHHHH
Confidence 444445554432 68999999999987 445689999999999999999999876643
No 49
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.49 E-value=7.2e-07 Score=76.89 Aligned_cols=67 Identities=10% Similarity=0.070 Sum_probs=56.6
Q ss_pred echHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCC
Q 013000 104 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 183 (451)
Q Consensus 104 i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 183 (451)
+....+.+.|.+.+.+.+ ++++++ +|++++. .++.+.|.+.+| ++.+|+||.|+|.+
T Consensus 53 ~~~~~~~~~l~~~~~~~g-v~v~~~-~v~~i~~--------------------~~~~~~v~~~~g-~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 53 PSGEELLRRLEAHARRYG-AEVRPG-VVKGVRD--------------------MGGVFEVETEEG-VEKAERLLLCTHKD 109 (180)
T ss_dssp CCHHHHHHHHHHHHHHTT-CEEEEC-CCCEEEE--------------------CSSSEEEECSSC-EEEEEEEEECCTTC
T ss_pred CCHHHHHHHHHHHHHHcC-CEEEeC-EEEEEEE--------------------cCCEEEEEECCC-EEEECEEEECCCCC
Confidence 445788899999998887 999999 9999976 334578888888 89999999999999
Q ss_pred ChhhhhhCCC
Q 013000 184 SRVRELAGFK 193 (451)
Q Consensus 184 S~vR~~l~~~ 193 (451)
|.+++.++.+
T Consensus 110 ~~~~~~~g~~ 119 (180)
T 2ywl_A 110 PTLPSLLGLT 119 (180)
T ss_dssp CHHHHHHTCC
T ss_pred CCccccCCCC
Confidence 9998888754
No 50
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.48 E-value=1.6e-07 Score=92.16 Aligned_cols=71 Identities=11% Similarity=0.063 Sum_probs=54.0
Q ss_pred eeechHHHHHHHHHHhhcCCCceEEcCCeeE---------EEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEE
Q 013000 102 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLT---------SMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLY 172 (451)
Q Consensus 102 ~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~ 172 (451)
..++...|.+.|.+.+++.| ++++++++|+ +++. .++.+.|...+| ++.
T Consensus 167 g~v~~~~l~~~L~~~~~~~G-v~i~~~~~v~~~~g~~~~~~i~~--------------------~~~~v~v~~~~g-~i~ 224 (405)
T 3c4n_A 167 LTYRPGSLALLAAQQAIGQG-AGLLLNTRAELVPGGVRLHRLTV--------------------TNTHQIVVHETR-QIR 224 (405)
T ss_dssp EEECHHHHHHHHHHHHHTTT-CEEECSCEEEEETTEEEEECBCC---------------------------CBCCE-EEE
T ss_pred EEEcHHHHHHHHHHHHHHCC-CEEEcCCEEEeccccccccceEe--------------------eCCeEEEEECCc-EEE
Confidence 35778899999999999886 8999999999 8754 234456666666 799
Q ss_pred eeEEEeecCCCC-hhhh-hhCCCC
Q 013000 173 AKLVVGADGGKS-RVRE-LAGFKT 194 (451)
Q Consensus 173 adlvVgADG~~S-~vR~-~l~~~~ 194 (451)
||.||.|+|.+| .+++ .++...
T Consensus 225 a~~VV~A~G~~s~~l~~~~~g~~~ 248 (405)
T 3c4n_A 225 AGVIIVAAGAAGPALVEQGLGLHT 248 (405)
T ss_dssp EEEEEECCGGGHHHHHHHHHCCCC
T ss_pred CCEEEECCCccHHHHHHHhcCCCC
Confidence 999999999999 6887 777653
No 51
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.46 E-value=3e-06 Score=80.99 Aligned_cols=52 Identities=13% Similarity=0.119 Sum_probs=41.2
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGG 182 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~ 182 (451)
..+.+.|.+.+ + ++|+++++|++++. .++++.|++.+|+++.+|.||.|-..
T Consensus 112 ~~l~~~l~~~~---g-~~i~~~~~V~~i~~--------------------~~~~~~v~~~~g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 112 SSIIKHYLKES---G-AEVYFRHRVTQINL--------------------RDDKWEVSKQTGSPEQFDLIVLTMPV 163 (342)
T ss_dssp THHHHHHHHHH---T-CEEESSCCEEEEEE--------------------CSSSEEEEESSSCCEEESEEEECSCH
T ss_pred HHHHHHHHHhc---C-CEEEeCCEEEEEEE--------------------cCCEEEEEECCCCEEEcCEEEECCCH
Confidence 34555555554 4 89999999999987 45668999999988899999999764
No 52
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.42 E-value=5.4e-07 Score=92.45 Aligned_cols=67 Identities=18% Similarity=0.162 Sum_probs=51.8
Q ss_pred echHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccC-CCeeEEEe--CCCc--EEEeeEEEe
Q 013000 104 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTK-GHLAKLDL--SDGT--SLYAKLVVG 178 (451)
Q Consensus 104 i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~~--~dg~--~~~adlvVg 178 (451)
+....|.+.|.+.+.+.+ ++|+++++|+++.. ++ +..+.|.+ .+|+ ++.||.||.
T Consensus 247 ~~~~~l~~~L~~~~~~~g-v~i~~~~~v~~l~~-------------------~~~g~v~Gv~~~~~~g~~~~i~A~~VVl 306 (566)
T 1qo8_A 247 SSGPEIIDTLRKAAKEQG-IDTRLNSRVVKLVV-------------------NDDHSVVGAVVHGKHTGYYMIGAKSVVL 306 (566)
T ss_dssp CHHHHHHHHHHHHHHHTT-CCEECSEEEEEEEE-------------------CTTSBEEEEEEEETTTEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcC-CEEEeCCEEEEEEE-------------------CCCCcEEEEEEEeCCCcEEEEEcCEEEE
Confidence 446789999999999886 99999999999976 12 22223444 4775 689999999
Q ss_pred ecCCCChhhhhh
Q 013000 179 ADGGKSRVRELA 190 (451)
Q Consensus 179 ADG~~S~vR~~l 190 (451)
|+|..|..|+.+
T Consensus 307 AtGg~s~~~~~~ 318 (566)
T 1qo8_A 307 ATGGYGMNKEMI 318 (566)
T ss_dssp CCCCCTTCHHHH
T ss_pred ecCCcccCHHHH
Confidence 999999876544
No 53
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.40 E-value=7e-07 Score=88.56 Aligned_cols=62 Identities=13% Similarity=0.070 Sum_probs=53.8
Q ss_pred eechHHHHHHHHHHhhcCCCceEEcCC---eeEEEEeCCCCCCcccCCCCCccccccCCCeeE-EEeCCCcEEEeeEEEe
Q 013000 103 VVENKVLHSSLLSCMQNTEFQKTIYPS---RLTSMALLPSSSSISVDSTPSATTLFTKGHLAK-LDLSDGTSLYAKLVVG 178 (451)
Q Consensus 103 ~i~R~~L~~~L~~~~~~~g~v~i~~~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-v~~~dg~~~~adlvVg 178 (451)
.++...+.+.|.+.+++.| ++|++++ +|++++. .++.+. |.+.+|+++.||.||.
T Consensus 157 ~~~~~~~~~~L~~~a~~~G-v~i~~~t~~~~V~~i~~--------------------~~~~v~gV~t~~G~~i~Ad~VV~ 215 (438)
T 3dje_A 157 WAHARNALVAAAREAQRMG-VKFVTGTPQGRVVTLIF--------------------ENNDVKGAVTADGKIWRAERTFL 215 (438)
T ss_dssp EECHHHHHHHHHHHHHHTT-CEEEESTTTTCEEEEEE--------------------ETTEEEEEEETTTEEEECSEEEE
T ss_pred EecHHHHHHHHHHHHHhcC-CEEEeCCcCceEEEEEe--------------------cCCeEEEEEECCCCEEECCEEEE
Confidence 4566789999999999987 9999999 9999976 345666 9999998899999999
Q ss_pred ecCCCCh
Q 013000 179 ADGGKSR 185 (451)
Q Consensus 179 ADG~~S~ 185 (451)
|+|.+|.
T Consensus 216 AtG~~s~ 222 (438)
T 3dje_A 216 CAGASAG 222 (438)
T ss_dssp CCGGGGG
T ss_pred CCCCChh
Confidence 9999986
No 54
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.38 E-value=1.9e-06 Score=81.16 Aligned_cols=140 Identities=16% Similarity=0.172 Sum_probs=86.2
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecHHHHHHHHHCCCchhhhhhhcccccEEEEE
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVW 80 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl~~~~~~~~~~~~~~~~~~ 80 (451)
|+||++|+.|++.+ .|++|+|+|+.+.+....+. .........+.+.....|+.+|+.-.
T Consensus 75 ~aGl~aA~~la~~~--~g~~V~v~e~~~~~ggg~~~---~g~~~~~~~~~~~~~~~L~~~Gv~~~--------------- 134 (326)
T 2gjc_A 75 SSGLSAAYVIAKNR--PDLKVCIIESSVAPGGGSWL---GGQLFSAMVMRKPAHLFLQELEIPYE--------------- 134 (326)
T ss_dssp HHHHHHHHHHHHHC--TTSCEEEECSSSSCCTTTTC---CGGGCCCEEEETTTHHHHHHTTCCCE---------------
T ss_pred HHHHHHHHHHHhcC--CCCeEEEEecCccccccccc---cCcccchhhhhhHHHHHHHhhCcccc---------------
Confidence 58999999999831 28999999999877322210 00111123444555666666654211
Q ss_pred eCCCcceeEeecCCCCCccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccC-C-
Q 013000 81 DYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTK-G- 158 (451)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 158 (451)
. .+ .+.+..+...+...|.+.+.+.++++++.+++|+++..+ .+. + +
T Consensus 135 ~-~g--------------~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~---------~~~-------~~g~ 183 (326)
T 2gjc_A 135 D-EG--------------DYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTR---------PPT-------EKGE 183 (326)
T ss_dssp E-CS--------------SEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEEC---------CCC-----------
T ss_pred c-CC--------------CeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeec---------ccc-------cCCC
Confidence 0 00 011222457889999999988756999999999999761 100 0 1
Q ss_pred -CeeEEEe--------------CCCcEEEe---------------eEEEeecCCCChhhhhhC
Q 013000 159 -HLAKLDL--------------SDGTSLYA---------------KLVVGADGGKSRVRELAG 191 (451)
Q Consensus 159 -~~v~v~~--------------~dg~~~~a---------------dlvVgADG~~S~vR~~l~ 191 (451)
....|.. .|+.++.| |+||.|+|..|++.+.+.
T Consensus 184 ~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~~ 246 (326)
T 2gjc_A 184 VTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCA 246 (326)
T ss_dssp -CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHHH
T ss_pred cEEEEEEecceeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHHHHH
Confidence 1122222 14457999 999999999999988773
No 55
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.38 E-value=8.6e-07 Score=90.68 Aligned_cols=112 Identities=15% Similarity=0.128 Sum_probs=72.3
Q ss_pred eechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCe-eEEEeCC---C--cEEEeeEE
Q 013000 103 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL-AKLDLSD---G--TSLYAKLV 176 (451)
Q Consensus 103 ~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~v~~~d---g--~~~~adlv 176 (451)
.++...|...|.+.+.+.| ++|+.+++|++++. .++. +.|.+.| | .++.||.|
T Consensus 166 ~vd~~~l~~~L~~~a~~~G-~~i~~~~~V~~l~~--------------------~~g~v~gV~~~d~~tg~~~~i~A~~V 224 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARG-AVALNYMKVESFIY--------------------DQGKVVGVVAKDRLTDTTHTIYAKKV 224 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTT-CEEEESEEEEEEEE--------------------ETTEEEEEEEEETTTCCEEEEEEEEE
T ss_pred eEcHHHHHHHHHHHHHHcC-CEEEcCCEEEEEEE--------------------cCCeEEEEEEEEcCCCceEEEECCEE
Confidence 5777899999999999887 89999999999976 3333 3466543 4 37999999
Q ss_pred EeecCCCC-hhhhhhCCCCCCCcccCeEEEEEEeecC-CCCe-eEEEecCCC-cEEEeecCCCc
Q 013000 177 VGADGGKS-RVRELAGFKTTGWSYSQNAIICTVEHNK-ENYC-AWQRFLPAG-PIALLPIGDNF 236 (451)
Q Consensus 177 VgADG~~S-~vR~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~g-~~~~~p~~~~~ 236 (451)
|.|+|.+| .+++.++......-....+....++... +... .+....++| .++++|. ++.
T Consensus 225 V~AaG~~s~~l~~~~g~~~~~~v~p~kG~~lvl~~~~~~~~~~~~~~~~~dgr~v~~iP~-~g~ 287 (561)
T 3da1_A 225 VNAAGPWVDTLREKDRSKHGKYLKLSKGVHLVVDQSRFPLRQAVYFDTESDGRMIFAIPR-EGK 287 (561)
T ss_dssp EECCGGGHHHHHHTTTCCCSSEEEEEEEEEEEEEGGGSCCSSEEEECCSSSCCCEEEEEE-TTE
T ss_pred EECCCcchHHHHHhcCCCCCceEEeccEEEEEECCccCCCceEEEeccCCCCcEEEEEec-CCC
Confidence 99999999 5788777653222222333344444322 2222 221111344 5677898 444
No 56
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.35 E-value=2.3e-06 Score=87.69 Aligned_cols=148 Identities=13% Similarity=0.092 Sum_probs=90.2
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCC-CCCCCCCCCCCCCCCCceeeecHHHHHHHHHCCC-chhhhhhhcccccEEE
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNP-ALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGA-WQYVQQHRHAYFDKMQ 78 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~-~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lgl-~~~~~~~~~~~~~~~~ 78 (451)
+||+++|+.|++. |.+|+|||+.. .....+|+ +...|+. .....+.++.+|- ....... .++.
T Consensus 38 ~AGl~AAlaLAr~----G~kVlLIEk~~~~iG~~~Cn-----ps~ggia-~~~lv~ei~algg~~~~~~d~-----~gi~ 102 (651)
T 3ces_A 38 HAGTEAAMAAARM----GQQTLLLTHNIDTLGQMSCN-----PAIGGIG-KGHLVKEVDALGGLMAKAIDQ-----AGIQ 102 (651)
T ss_dssp HHHHHHHHHHHHT----TCCEEEEESCGGGTTCCSSS-----SEEESTT-HHHHHHHHHHTTCSHHHHHHH-----HEEE
T ss_pred HHHHHHHHHHHhC----CCCEEEEeeccccccccccc-----ccccchh-hHHHHHHHHHhccHHHHHhhh-----cccc
Confidence 5899999999994 99999999985 34334441 1111110 1123344455542 2221111 1222
Q ss_pred EEe-CCCcceeEeecCCCCCccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccC
Q 013000 79 VWD-YTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTK 157 (451)
Q Consensus 79 ~~~-~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (451)
+.. ...... ........++|..+.+.|.+.+.+..+++| ++++|+++.. ++
T Consensus 103 f~~l~~~kgp--------av~~~r~~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~-------------------e~ 154 (651)
T 3ces_A 103 FRILNASKGP--------AVRATRAQADRVLYRQAVRTALENQPNLMI-FQQAVEDLIV-------------------EN 154 (651)
T ss_dssp EEEESTTSCG--------GGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEE-------------------SS
T ss_pred hhhhhcccCc--------ccccchhhCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEe-------------------cC
Confidence 211 000000 001122468899999999999988445999 5679999975 12
Q ss_pred CCeeEEEeCCCcEEEeeEEEeecCCCChhhhhhC
Q 013000 158 GHLAKLDLSDGTSLYAKLVVGADGGKSRVRELAG 191 (451)
Q Consensus 158 ~~~v~v~~~dg~~~~adlvVgADG~~S~vR~~l~ 191 (451)
+..+.|.+.+|.++.||.||.|+|.+|..+...|
T Consensus 155 g~V~GV~t~dG~~I~Ad~VVLATGt~s~~~~i~G 188 (651)
T 3ces_A 155 DRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIG 188 (651)
T ss_dssp SBEEEEEETTSEEEEEEEEEECCSTTTCCEEECC
T ss_pred CEEEEEEECCCCEEECCEEEEcCCCCccCccccC
Confidence 2334788889989999999999999998776554
No 57
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.34 E-value=5.7e-07 Score=81.13 Aligned_cols=67 Identities=16% Similarity=0.100 Sum_probs=55.0
Q ss_pred chHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCe-eEEEeCCCcEEEeeEEEeecCCC
Q 013000 105 ENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL-AKLDLSDGTSLYAKLVVGADGGK 183 (451)
Q Consensus 105 ~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~v~~~dg~~~~adlvVgADG~~ 183 (451)
+|..+.+.|.+.+.+.++++++ +++|+++.. .++. +.|.+.+|+++.||+||.|+|.+
T Consensus 66 ~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~--------------------~~~~v~~v~~~~g~~i~a~~VV~A~G~~ 124 (232)
T 2cul_A 66 RVWAFHARAKYLLEGLRPLHLF-QATATGLLL--------------------EGNRVVGVRTWEGPPARGEKVVLAVGSF 124 (232)
T ss_dssp CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEE--------------------ETTEEEEEEETTSCCEECSEEEECCTTC
T ss_pred CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEE--------------------eCCEEEEEEECCCCEEECCEEEECCCCC
Confidence 6889999999999887449998 579999976 2344 46788899899999999999999
Q ss_pred ChhhhhhCC
Q 013000 184 SRVRELAGF 192 (451)
Q Consensus 184 S~vR~~l~~ 192 (451)
|..+..+|.
T Consensus 125 s~~~~~~G~ 133 (232)
T 2cul_A 125 LGARLFLGG 133 (232)
T ss_dssp SSCEEEETT
T ss_pred hhhceecCC
Confidence 998876654
No 58
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.33 E-value=1.3e-06 Score=85.40 Aligned_cols=62 Identities=16% Similarity=0.100 Sum_probs=49.8
Q ss_pred chHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCC
Q 013000 105 ENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKS 184 (451)
Q Consensus 105 ~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S 184 (451)
++..+.+.|.+.+.+.+ ++|+++++|+++.. .++. .++.+.|...+| +++||.||.|+|.+|
T Consensus 107 ~~~~l~~~L~~~~~~~G-v~i~~~~~v~~i~~---------~~~g-------~~~~~~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 107 GAEQIVEMLKSECDKYG-AKILLRSEVSQVER---------IQND-------EKVRFVLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp CTHHHHHHHHHHHHHHT-CEEECSCCEEEEEE---------CCSC-------SSCCEEEEETTE-EEEESEEEECCCCSS
T ss_pred CHHHHHHHHHHHHHHCC-CEEEeCCEEEEEEc---------ccCc-------CCCeEEEEECCC-EEECCEEEECCCCcc
Confidence 56888899999998886 99999999999975 0000 034578887777 799999999999999
No 59
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.28 E-value=9.9e-07 Score=84.99 Aligned_cols=67 Identities=13% Similarity=0.032 Sum_probs=54.9
Q ss_pred echHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCC
Q 013000 104 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 183 (451)
Q Consensus 104 i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 183 (451)
+++..+.+.|.+.+.+.+ ++++++++|+++.. +.+..+.|.+.+|+++.+|.||.|+|.+
T Consensus 71 ~~~~~~~~~l~~~~~~~~-~~~~~~~~v~~i~~-------------------~~~~~~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 71 VPAIDLVESLWAQAERYN-PDVVLNETVTKYTK-------------------LDDGTFETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp EEHHHHHHHHHHHHHTTC-CEEECSCCEEEEEE-------------------CTTSCEEEEETTSCEEEEEEEEECCTTC
T ss_pred CCHHHHHHHHHHHHHHhC-CEEEcCCEEEEEEE-------------------CCCceEEEEECCCcEEEeeEEEEccCCC
Confidence 557788888999888776 89999999999976 1223678888899899999999999999
Q ss_pred Chhhhhh
Q 013000 184 SRVRELA 190 (451)
Q Consensus 184 S~vR~~l 190 (451)
|..++.+
T Consensus 131 ~~~~~~~ 137 (360)
T 3ab1_A 131 AFEPRKL 137 (360)
T ss_dssp SCCBCCC
T ss_pred cCCCCCC
Confidence 8766554
No 60
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.26 E-value=9e-07 Score=90.90 Aligned_cols=64 Identities=14% Similarity=0.062 Sum_probs=49.2
Q ss_pred chHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccC-CCeeEEEeC--CCc--EEEeeEEEee
Q 013000 105 ENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTK-GHLAKLDLS--DGT--SLYAKLVVGA 179 (451)
Q Consensus 105 ~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~~~--dg~--~~~adlvVgA 179 (451)
....+.+.|.+.+.+.+ ++|+++++|+++.. +. +..+.|.+. +|+ ++.||.||.|
T Consensus 253 ~g~~l~~~L~~~~~~~g-v~i~~~~~v~~l~~-------------------~~~g~v~Gv~~~~~~g~~~~i~a~~VVlA 312 (571)
T 1y0p_A 253 VGAHVVQVLYDNAVKRN-IDLRMNTRGIEVLK-------------------DDKGTVKGILVKGMYKGYYWVKADAVILA 312 (571)
T ss_dssp HHHHHHHHHHHHHHHTT-CEEESSEEEEEEEE-------------------CTTSCEEEEEEEETTTEEEEEECSEEEEC
T ss_pred CHHHHHHHHHHHHHhcC-CEEEeCCEeeEeEE-------------------cCCCeEEEEEEEeCCCcEEEEECCeEEEe
Confidence 34789999999999886 99999999999976 12 222234443 675 7899999999
Q ss_pred cCCCChhhh
Q 013000 180 DGGKSRVRE 188 (451)
Q Consensus 180 DG~~S~vR~ 188 (451)
+|..|..++
T Consensus 313 tGg~~~n~~ 321 (571)
T 1y0p_A 313 TGGFAKNNE 321 (571)
T ss_dssp CCCCTTCHH
T ss_pred CCCcccCHH
Confidence 999997543
No 61
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.26 E-value=3.9e-06 Score=85.89 Aligned_cols=145 Identities=11% Similarity=0.036 Sum_probs=86.9
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCC-CCCCCCCCCCCCCCCCceeeecHHHHHHHHHCC-CchhhhhhhcccccEEE
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNP-ALGKSNFIKKEDPPDPRVSTVTPATISFFKEIG-AWQYVQQHRHAYFDKMQ 78 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~-~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lg-l~~~~~~~~~~~~~~~~ 78 (451)
+||+++|+.|++. |.+|+|||+.. .....+| .+...|+. ....++.++.++ +....... .++.
T Consensus 31 ~AGl~AAlaLAr~----G~kVlLIEk~~~~iG~~~c-----~ps~gGia-~~~lv~el~al~g~~~~~~d~-----~gi~ 95 (641)
T 3cp8_A 31 HAGCEAALAVARG----GLHCLLITSDLSAVARMSC-----NPAIGGVA-KGQITREIDALGGEMGKAIDA-----TGIQ 95 (641)
T ss_dssp HHHHHHHHHHHHT----TCCEEEEESCGGGTTCCSS-----CSEEECHH-HHHHHHHHHHHTCSHHHHHHH-----HEEE
T ss_pred HHHHHHHHHHHHC----CCcEEEEEecccccCCCcc-----ccchhhhh-HHHHHHHHHhcccHHHHHHHh-----cCCc
Confidence 5899999999994 99999999985 3433344 11111110 011222333332 22211111 1222
Q ss_pred EEe-CCCcceeEeecCCCCCccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccC
Q 013000 79 VWD-YTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTK 157 (451)
Q Consensus 79 ~~~-~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (451)
+.. ..... . ........++|..+...|.+.+.+.++++++. .+|+++.. .
T Consensus 96 f~~l~~~kg-------p-av~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~-~~V~~L~~--------------------d 146 (641)
T 3cp8_A 96 FRMLNRSKG-------P-AMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQ-DTVIGVSA--------------------N 146 (641)
T ss_dssp EEEECSSSC-------T-TTCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEE--------------------E
T ss_pred hhhcccccC-------c-cccchhhhcCHHHHHHHHHHHHHhCCCCEEEe-eEEEEEEe--------------------c
Confidence 211 00000 0 01112356899999999999998865599864 58999865 3
Q ss_pred CCeeE-EEeCCCcEEEeeEEEeecCCCChhhhh
Q 013000 158 GHLAK-LDLSDGTSLYAKLVVGADGGKSRVREL 189 (451)
Q Consensus 158 ~~~v~-v~~~dg~~~~adlvVgADG~~S~vR~~ 189 (451)
++.+. |.+.+|.++.||.||.|+|.+|..+-.
T Consensus 147 ~g~V~GV~t~~G~~i~Ad~VVLATG~~s~~~i~ 179 (641)
T 3cp8_A 147 SGKFSSVTVRSGRAIQAKAAILACGTFLNGLIH 179 (641)
T ss_dssp TTEEEEEEETTSCEEEEEEEEECCTTCBTCEEE
T ss_pred CCEEEEEEECCCcEEEeCEEEECcCCCCCccce
Confidence 34554 888899999999999999999875543
No 62
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.23 E-value=1.6e-05 Score=79.59 Aligned_cols=53 Identities=15% Similarity=0.135 Sum_probs=40.4
Q ss_pred HHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCCh
Q 013000 109 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 185 (451)
Q Consensus 109 L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 185 (451)
|.+.|.+.+.+ ++|+++++|++|+. .++++.|++.+| ++.||.||-|-+....
T Consensus 238 l~~~l~~~l~~---~~i~~~~~V~~i~~--------------------~~~~~~v~~~~g-~~~ad~vV~a~p~~~~ 290 (475)
T 3lov_A 238 LIERLEEVLER---SEIRLETPLLAISR--------------------EDGRYRLKTDHG-PEYADYVLLTIPHPQV 290 (475)
T ss_dssp HHHHHHHHCSS---CEEESSCCCCEEEE--------------------ETTEEEEECTTC-CEEESEEEECSCHHHH
T ss_pred HHHHHHhhccC---CEEEcCCeeeEEEE--------------------eCCEEEEEECCC-eEECCEEEECCCHHHH
Confidence 44444444432 59999999999976 456789999999 7999999999887644
No 63
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.21 E-value=1.4e-06 Score=83.37 Aligned_cols=61 Identities=15% Similarity=0.141 Sum_probs=52.3
Q ss_pred eechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeE-EEeCCCcEEEeeEEEeecC
Q 013000 103 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAK-LDLSDGTSLYAKLVVGADG 181 (451)
Q Consensus 103 ~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-v~~~dg~~~~adlvVgADG 181 (451)
..+|..+.+.|.+.+.+.+ ++++++++|+++.. .+..+. |...+| ++.+|.||.|+|
T Consensus 72 ~~~~~~~~~~l~~~~~~~~-~~~~~~~~v~~i~~--------------------~~~~~~~v~~~~g-~~~~d~vV~AtG 129 (357)
T 4a9w_A 72 YPARAEVLAYLAQYEQKYA-LPVLRPIRVQRVSH--------------------FGERLRVVARDGR-QWLARAVISATG 129 (357)
T ss_dssp SCBHHHHHHHHHHHHHHTT-CCEECSCCEEEEEE--------------------ETTEEEEEETTSC-EEEEEEEEECCC
T ss_pred CCCHHHHHHHHHHHHHHcC-CEEEcCCEEEEEEE--------------------CCCcEEEEEeCCC-EEEeCEEEECCC
Confidence 3568899999999998886 89999999999976 456677 888888 899999999999
Q ss_pred CCCh
Q 013000 182 GKSR 185 (451)
Q Consensus 182 ~~S~ 185 (451)
.+|.
T Consensus 130 ~~~~ 133 (357)
T 4a9w_A 130 TWGE 133 (357)
T ss_dssp SGGG
T ss_pred CCCC
Confidence 8774
No 64
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.21 E-value=6.5e-06 Score=84.00 Aligned_cols=147 Identities=14% Similarity=0.078 Sum_probs=89.8
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCC-CCCCCCCCCCCCCCCCceeeecHHHHHHHHHCC-CchhhhhhhcccccEEE
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNP-ALGKSNFIKKEDPPDPRVSTVTPATISFFKEIG-AWQYVQQHRHAYFDKMQ 78 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~-~~~~~~~~~~~~~~~~~g~~l~~~~~~~L~~lg-l~~~~~~~~~~~~~~~~ 78 (451)
+||+++|+.|++. |.+|+|||+.. .....+|+ +...|+. .....+.++.+| .+...... .++.
T Consensus 37 ~AGl~AAlalAr~----G~kVlLIEk~~~~iG~~~Cn-----ps~GGia-~g~lv~eldalgg~~~~~~d~-----~gi~ 101 (637)
T 2zxi_A 37 HAGIEAALAAARM----GAKTAMFVLNADTIGQMSCN-----PAIGGIA-KGIVVREIDALGGEMGKAIDQ-----TGIQ 101 (637)
T ss_dssp HHHHHHHHHHHHT----TCCEEEEESCGGGTTCCCSC-----SEEECTT-HHHHHHHHHHHTCSHHHHHHH-----HEEE
T ss_pred HHHHHHHHHHHHC----CCCEEEEEecccccCCcCcc-----ccccccc-hHHHHHHHHHhhhHHHHHhhh-----cccc
Confidence 5899999999994 99999999985 34334441 1111110 112334445554 22222211 1222
Q ss_pred EEe-CCCcceeEeecCCCCCccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccC
Q 013000 79 VWD-YTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTK 157 (451)
Q Consensus 79 ~~~-~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (451)
+.. ...... ........++|..+.+.|.+.+.+..+++| ++++|+++.. ++
T Consensus 102 f~~l~~~kGp--------av~~~r~~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~-------------------e~ 153 (637)
T 2zxi_A 102 FKMLNTRKGK--------AVQSPRAQADKKRYREYMKKVCENQENLYI-KQEEVVDIIV-------------------KN 153 (637)
T ss_dssp EEEESTTSCG--------GGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEE-------------------SS
T ss_pred eeecccccCc--------cccchhhhCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEe-------------------cC
Confidence 211 000000 001122467899999999999988545999 5679999876 12
Q ss_pred CCeeEEEeCCCcEEEeeEEEeecCCCChhhhhh
Q 013000 158 GHLAKLDLSDGTSLYAKLVVGADGGKSRVRELA 190 (451)
Q Consensus 158 ~~~v~v~~~dg~~~~adlvVgADG~~S~vR~~l 190 (451)
+....|.+.+|.++.||.||.|+|.+|..+...
T Consensus 154 g~V~GV~t~dG~~i~AdaVVLATG~~s~~~~~~ 186 (637)
T 2zxi_A 154 NQVVGVRTNLGVEYKTKAVVVTTGTFLNGVIYI 186 (637)
T ss_dssp SBEEEEEETTSCEEECSEEEECCTTCBTCEEEE
T ss_pred CEEEEEEECCCcEEEeCEEEEccCCCccCceec
Confidence 233468888999999999999999998776543
No 65
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.18 E-value=2e-06 Score=81.85 Aligned_cols=67 Identities=24% Similarity=0.188 Sum_probs=54.3
Q ss_pred echHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCC
Q 013000 104 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 183 (451)
Q Consensus 104 i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 183 (451)
+.+..+...|.+.+.+.+ ++++++++|+++.. .++.+.|...+|+++.+|.||.|+|.+
T Consensus 62 ~~~~~~~~~l~~~~~~~~-~~~~~~~~v~~i~~--------------------~~~~~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 62 VYAKDLVKGLVEQVAPFN-PVYSLGERAETLER--------------------EGDLFKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp EEHHHHHHHHHHHHGGGC-CEEEESCCEEEEEE--------------------ETTEEEEEETTSCEEEEEEEEECCTTS
T ss_pred CCHHHHHHHHHHHHHHcC-CEEEeCCEEEEEEE--------------------CCCEEEEEECCCCEEEeCEEEECCCCC
Confidence 456788888888888776 89999999999976 334678888888899999999999998
Q ss_pred ChhhhhhC
Q 013000 184 SRVRELAG 191 (451)
Q Consensus 184 S~vR~~l~ 191 (451)
|...+...
T Consensus 121 ~~~p~~~~ 128 (335)
T 2zbw_A 121 AFEPRRIG 128 (335)
T ss_dssp EEEECCCC
T ss_pred CCCCCCCC
Confidence 86655543
No 66
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.17 E-value=2.2e-05 Score=77.91 Aligned_cols=85 Identities=15% Similarity=0.100 Sum_probs=57.7
Q ss_pred eeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCe-eEEEeCCCcEE--EeeEEEe
Q 013000 102 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL-AKLDLSDGTSL--YAKLVVG 178 (451)
Q Consensus 102 ~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~v~~~dg~~~--~adlvVg 178 (451)
..++...+.+.|.+.+.+.| ++|+++++|++++.++..+..-..+..+. .++. +.|...+| ++ .||.||.
T Consensus 176 ~~~~~~~l~~~L~~~~~~~G-v~i~~~~~V~~i~~~~~~~~~~~~~~~~~-----~~~~v~~V~t~~g-~i~~~Ad~VV~ 248 (448)
T 3axb_A 176 GFLDAEKVVDYYYRRASGAG-VEFIFGRRVVGVELKPRVELGIEGEPLPW-----QEARASAAVLSDG-TRVEVGEKLVV 248 (448)
T ss_dssp EECCHHHHHHHHHHHHHHTT-CEEEESCCEEEEEEEESSCCCCTTSSCTT-----SCEEEEEEEETTS-CEEEEEEEEEE
T ss_pred eEEcHHHHHHHHHHHHHhCC-CEEEcCCeEEEEEeccccccccccccccc-----CCCceEEEEeCCC-EEeecCCEEEE
Confidence 34677799999999999887 99999999999975111111000000000 1233 36777788 57 9999999
Q ss_pred ecCCCCh-hhhhhCCC
Q 013000 179 ADGGKSR-VRELAGFK 193 (451)
Q Consensus 179 ADG~~S~-vR~~l~~~ 193 (451)
|+|.+|. +.+.++..
T Consensus 249 AtG~~s~~l~~~~g~~ 264 (448)
T 3axb_A 249 AAGVWSNRLLNPLGID 264 (448)
T ss_dssp CCGGGHHHHHGGGTCC
T ss_pred CCCcCHHHHHHHcCCC
Confidence 9999987 77776654
No 67
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.14 E-value=0.00011 Score=73.32 Aligned_cols=56 Identities=18% Similarity=0.167 Sum_probs=43.3
Q ss_pred HHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCe-eEEEeCCCcEEEeeEEEeecCCCCh
Q 013000 108 VLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL-AKLDLSDGTSLYAKLVVGADGGKSR 185 (451)
Q Consensus 108 ~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~v~~~dg~~~~adlvVgADG~~S~ 185 (451)
.|.+.|.+.+.+.| ++|+++++|++++. .+++ +.|+. +|.++.||.||-|-+....
T Consensus 235 ~l~~~l~~~l~~~g-~~i~~~~~V~~i~~--------------------~~~~~~~v~~-~~~~~~ad~vv~a~p~~~~ 291 (477)
T 3nks_A 235 MLPQALETHLTSRG-VSVLRGQPVCGLSL--------------------QAEGRWKVSL-RDSSLEADHVISAIPASVL 291 (477)
T ss_dssp HHHHHHHHHHHHTT-CEEECSCCCCEEEE--------------------CGGGCEEEEC-SSCEEEESEEEECSCHHHH
T ss_pred HHHHHHHHHHHhcC-CEEEeCCEEEEEEE--------------------cCCceEEEEE-CCeEEEcCEEEECCCHHHH
Confidence 47777888888776 89999999999976 2233 77766 5557999999999876543
No 68
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.14 E-value=4.3e-06 Score=78.65 Aligned_cols=63 Identities=19% Similarity=0.128 Sum_probs=51.5
Q ss_pred eechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCC
Q 013000 103 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGG 182 (451)
Q Consensus 103 ~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~ 182 (451)
.+++..+.+.|.+.+.+.+ +++++ ++|+++.. .+..+.|.+.+|.++.+|.||.|+|.
T Consensus 55 ~~~~~~~~~~l~~~~~~~~-v~~~~-~~v~~i~~--------------------~~~~~~v~~~~g~~~~~~~vv~AtG~ 112 (311)
T 2q0l_A 55 VVSGLDFMQPWQEQCFRFG-LKHEM-TAVQRVSK--------------------KDSHFVILAEDGKTFEAKSVIIATGG 112 (311)
T ss_dssp CBCHHHHHHHHHHHHHTTS-CEEEC-SCEEEEEE--------------------ETTEEEEEETTSCEEEEEEEEECCCE
T ss_pred cCCHHHHHHHHHHHHHHcC-CEEEE-EEEEEEEE--------------------cCCEEEEEEcCCCEEECCEEEECCCC
Confidence 3677889999998888876 89988 78999876 34567788888989999999999998
Q ss_pred CChhh
Q 013000 183 KSRVR 187 (451)
Q Consensus 183 ~S~vR 187 (451)
++.+.
T Consensus 113 ~~~~~ 117 (311)
T 2q0l_A 113 SPKRT 117 (311)
T ss_dssp EECCC
T ss_pred CCCCC
Confidence 76543
No 69
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.11 E-value=4.4e-05 Score=73.45 Aligned_cols=50 Identities=22% Similarity=0.101 Sum_probs=42.3
Q ss_pred eeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecC
Q 013000 102 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADG 181 (451)
Q Consensus 102 ~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG 181 (451)
..++...|.+.|.+.+++.| ++|+. ++|++++. . .+ .||.||.|+|
T Consensus 137 ~~v~p~~~~~~l~~~~~~~G-~~i~~-~~v~~l~~----------------------~---------~~-~a~~VV~A~G 182 (363)
T 1c0p_A 137 LSVHAPKYCQYLARELQKLG-ATFER-RTVTSLEQ----------------------A---------FD-GADLVVNATG 182 (363)
T ss_dssp EECCHHHHHHHHHHHHHHTT-CEEEE-CCCSBGGG----------------------T---------CS-SCSEEEECCG
T ss_pred ceecHHHHHHHHHHHHHHCC-CEEEE-EEcccHhh----------------------c---------Cc-CCCEEEECCC
Confidence 56889999999999999997 89998 89998854 1 12 8999999999
Q ss_pred CCCh
Q 013000 182 GKSR 185 (451)
Q Consensus 182 ~~S~ 185 (451)
.+|.
T Consensus 183 ~~s~ 186 (363)
T 1c0p_A 183 LGAK 186 (363)
T ss_dssp GGGG
T ss_pred cchh
Confidence 9985
No 70
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.07 E-value=0.00014 Score=72.60 Aligned_cols=53 Identities=17% Similarity=0.122 Sum_probs=39.8
Q ss_pred HHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEe---CCCcEEEeeEEEeecCCCCh
Q 013000 109 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDL---SDGTSLYAKLVVGADGGKSR 185 (451)
Q Consensus 109 L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~---~dg~~~~adlvVgADG~~S~ 185 (451)
|.+.|.+.+ + ++|+++++|++++. .++++.|++ .+|+++.||.||.|-+....
T Consensus 240 l~~~l~~~l---g-~~i~~~~~V~~i~~--------------------~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~ 295 (478)
T 2ivd_A 240 LIDALAASL---G-DAAHVGARVEGLAR--------------------EDGGWRLIIEEHGRRAELSVAQVVLAAPAHAT 295 (478)
T ss_dssp HHHHHHHHH---G-GGEESSEEEEEEEC--------------------C--CCEEEEEETTEEEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHh---h-hhEEcCCEEEEEEe--------------------cCCeEEEEEeecCCCceEEcCEEEECCCHHHH
Confidence 444455544 4 68999999999976 334588888 78888999999999987654
No 71
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.07 E-value=6.2e-05 Score=73.98 Aligned_cols=61 Identities=13% Similarity=0.211 Sum_probs=48.5
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCChh
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 186 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 186 (451)
..|.+.|.+.+.+.| ++|+++++|++++. +++.+ | ..+|.++.||.||-|-|.+...
T Consensus 189 ~~l~~~l~~~~~~~G-~~i~~~~~V~~i~~--------------------~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~~ 245 (421)
T 3nrn_A 189 KAVIDELERIIMENK-GKILTRKEVVEINI--------------------EEKKV-Y-TRDNEEYSFDVAISNVGVRETV 245 (421)
T ss_dssp HHHHHHHHHHHHTTT-CEEESSCCEEEEET--------------------TTTEE-E-ETTCCEEECSEEEECSCHHHHH
T ss_pred HHHHHHHHHHHHHCC-CEEEcCCeEEEEEE--------------------ECCEE-E-EeCCcEEEeCEEEECCCHHHHH
Confidence 467777888888887 89999999999976 44566 5 4678899999999999987654
Q ss_pred hhhhC
Q 013000 187 RELAG 191 (451)
Q Consensus 187 R~~l~ 191 (451)
+.++
T Consensus 246 -~ll~ 249 (421)
T 3nrn_A 246 -KLIG 249 (421)
T ss_dssp -HHHC
T ss_pred -HhcC
Confidence 4554
No 72
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.04 E-value=5.6e-06 Score=82.29 Aligned_cols=63 Identities=8% Similarity=-0.068 Sum_probs=52.0
Q ss_pred eechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCC---Cc---EEEeeEE
Q 013000 103 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSD---GT---SLYAKLV 176 (451)
Q Consensus 103 ~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d---g~---~~~adlv 176 (451)
..+|..+.+.|.+.+.+.+ ..++++++|++++. .++.+.|++.+ |+ ++.+|.|
T Consensus 111 ~~~~~~l~~~l~~~~~~~~-~~i~~~t~V~~v~~--------------------~~~~~~V~~~~~~~G~~~~~~~~d~V 169 (447)
T 2gv8_A 111 FPHRHTIQEYQRIYAQPLL-PFIKLATDVLDIEK--------------------KDGSWVVTYKGTKAGSPISKDIFDAV 169 (447)
T ss_dssp SCBHHHHHHHHHHHHGGGG-GGEECSEEEEEEEE--------------------ETTEEEEEEEESSTTCCEEEEEESEE
T ss_pred CCCHHHHHHHHHHHHHHhh-CeEEeCCEEEEEEe--------------------CCCeEEEEEeecCCCCeeEEEEeCEE
Confidence 4678999999999988775 78999999999976 34567777765 76 7999999
Q ss_pred EeecCCCChh
Q 013000 177 VGADGGKSRV 186 (451)
Q Consensus 177 VgADG~~S~v 186 (451)
|.|+|.+|.-
T Consensus 170 VvAtG~~s~p 179 (447)
T 2gv8_A 170 SICNGHYEVP 179 (447)
T ss_dssp EECCCSSSSB
T ss_pred EECCCCCCCC
Confidence 9999998853
No 73
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=97.98 E-value=0.00033 Score=68.68 Aligned_cols=59 Identities=15% Similarity=0.116 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeE-EEeCCCcEEEeeEEEeecCCCCh
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAK-LDLSDGTSLYAKLVVGADGGKSR 185 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-v~~~dg~~~~adlvVgADG~~S~ 185 (451)
..|.+.|.+.+.+.| ++|+.+++|++++. +++.+. |.. +|+++.||.||-|-|.+..
T Consensus 196 ~~l~~~l~~~~~~~G-~~i~~~~~V~~i~~--------------------~~~~~~gv~~-~g~~~~ad~VV~a~~~~~~ 253 (425)
T 3ka7_A 196 KGIIDALETVISANG-GKIHTGQEVSKILI--------------------ENGKAAGIIA-DDRIHDADLVISNLGHAAT 253 (425)
T ss_dssp HHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------ETTEEEEEEE-TTEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHcC-CEEEECCceeEEEE--------------------ECCEEEEEEE-CCEEEECCEEEECCCHHHH
Confidence 457788888888887 89999999999976 345554 655 5788999999999998766
Q ss_pred hh
Q 013000 186 VR 187 (451)
Q Consensus 186 vR 187 (451)
.+
T Consensus 254 ~~ 255 (425)
T 3ka7_A 254 AV 255 (425)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 74
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.96 E-value=2.3e-05 Score=79.63 Aligned_cols=65 Identities=18% Similarity=0.168 Sum_probs=54.2
Q ss_pred eechHHHHHHHHHHhhcCCCc--eEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeec
Q 013000 103 VVENKVLHSSLLSCMQNTEFQ--KTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGAD 180 (451)
Q Consensus 103 ~i~R~~L~~~L~~~~~~~g~v--~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgAD 180 (451)
..++..+.+.|.+.+.+.+ + .++++++|++++. + +....+.|++.+|+++.+|.||.|+
T Consensus 83 ~~~~~ei~~~l~~~~~~~g-~~~~i~~~~~V~~i~~-----------~-------~~~~~~~V~~~~G~~i~ad~lV~At 143 (540)
T 3gwf_A 83 YITQPEILEYLEDVVDRFD-LRRHFKFGTEVTSALY-----------L-------DDENLWEVTTDHGEVYRAKYVVNAV 143 (540)
T ss_dssp EEEHHHHHHHHHHHHHHTT-CGGGEEESCCEEEEEE-----------E-------TTTTEEEEEETTSCEEEEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHHcC-CcceeEeccEEEEEEE-----------e-------CCCCEEEEEEcCCCEEEeCEEEECC
Confidence 4678899999999888876 6 8999999999976 1 1235789999999999999999999
Q ss_pred CCCChh
Q 013000 181 GGKSRV 186 (451)
Q Consensus 181 G~~S~v 186 (451)
|..|.-
T Consensus 144 G~~s~p 149 (540)
T 3gwf_A 144 GLLSAI 149 (540)
T ss_dssp CSCCSB
T ss_pred cccccC
Confidence 998753
No 75
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.92 E-value=4.9e-05 Score=77.87 Aligned_cols=65 Identities=17% Similarity=0.112 Sum_probs=49.5
Q ss_pred chHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccC-CCeeEEEe--CCCc--EEEeeEEEee
Q 013000 105 ENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTK-GHLAKLDL--SDGT--SLYAKLVVGA 179 (451)
Q Consensus 105 ~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~~--~dg~--~~~adlvVgA 179 (451)
....+.+.|.+.+.+.+ ++|+++++|+++.. ++ +..+.|.. .+|+ ++.||.||.|
T Consensus 253 ~g~~l~~~L~~~~~~~g-v~i~~~t~v~~l~~-------------------~~~g~v~GV~~~~~~G~~~~i~A~~VVlA 312 (572)
T 1d4d_A 253 VGAHVAQVLWDNAVKRG-TDIRLNSRVVRILE-------------------DASGKVTGVLVKGEYTGYYVIKADAVVIA 312 (572)
T ss_dssp HHHHHHHHHHHHHHHTT-CEEESSEEEEEEEE-------------------C--CCEEEEEEEETTTEEEEEECSEEEEC
T ss_pred CHHHHHHHHHHHHHHcC-CeEEecCEEEEEEE-------------------CCCCeEEEEEEEeCCCcEEEEEcCEEEEe
Confidence 35688999999999886 99999999999976 12 23233444 3675 6899999999
Q ss_pred cCCCChhhhh
Q 013000 180 DGGKSRVREL 189 (451)
Q Consensus 180 DG~~S~vR~~ 189 (451)
+|..|..++.
T Consensus 313 tGg~~~~~~~ 322 (572)
T 1d4d_A 313 AGGFAKNNER 322 (572)
T ss_dssp CCCCTTCHHH
T ss_pred CCCCccCHHH
Confidence 9999976443
No 76
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.89 E-value=8.2e-06 Score=77.47 Aligned_cols=60 Identities=15% Similarity=0.116 Sum_probs=48.6
Q ss_pred echHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCC
Q 013000 104 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 183 (451)
Q Consensus 104 i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 183 (451)
+++..+...|.+.+.+.+ +++++++ |+++.. .+..+.|.+ +|.++.+|.||.|+|.+
T Consensus 67 ~~~~~~~~~l~~~~~~~g-v~~~~~~-v~~i~~--------------------~~~~~~v~~-~~~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 67 ILGVELTDKFRKQSERFG-TTIFTET-VTKVDF--------------------SSKPFKLFT-DSKAILADAVILAIGAV 123 (333)
T ss_dssp EEHHHHHHHHHHHHHHTT-CEEECCC-CCEEEC--------------------SSSSEEEEC-SSEEEEEEEEEECCCEE
T ss_pred CCHHHHHHHHHHHHHHCC-CEEEEeE-EEEEEE--------------------cCCEEEEEE-CCcEEEcCEEEECCCCC
Confidence 567788888988888876 8999986 888865 334577777 78889999999999998
Q ss_pred Chh
Q 013000 184 SRV 186 (451)
Q Consensus 184 S~v 186 (451)
+..
T Consensus 124 ~~~ 126 (333)
T 1vdc_A 124 AKR 126 (333)
T ss_dssp ECC
T ss_pred cCC
Confidence 654
No 77
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=97.87 E-value=7.4e-05 Score=80.12 Aligned_cols=70 Identities=14% Similarity=0.140 Sum_probs=55.8
Q ss_pred eeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCee-EEEeCCCcEEEeeEEEeec
Q 013000 102 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLA-KLDLSDGTSLYAKLVVGAD 180 (451)
Q Consensus 102 ~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~v~~~dg~~~~adlvVgAD 180 (451)
..++...+.+.|.+.+++.| ++|+.+++|++++. .++.+ .|...+| ++.||.||.|+
T Consensus 146 g~v~p~~l~~~L~~~a~~~G-v~i~~~t~V~~i~~--------------------~~~~v~~V~t~~G-~i~Ad~VV~Aa 203 (830)
T 1pj5_A 146 GLASAARAVQLLIKRTESAG-VTYRGSTTVTGIEQ--------------------SGGRVTGVQTADG-VIPADIVVSCA 203 (830)
T ss_dssp EEECHHHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------ETTEEEEEEETTE-EEECSEEEECC
T ss_pred ceEcHHHHHHHHHHHHHHcC-CEEECCceEEEEEE--------------------eCCEEEEEEECCc-EEECCEEEECC
Confidence 34678899999999999987 99999999999976 33444 5777777 79999999999
Q ss_pred CCCChh-hhhhCCC
Q 013000 181 GGKSRV-RELAGFK 193 (451)
Q Consensus 181 G~~S~v-R~~l~~~ 193 (451)
|.+|.. .+.++..
T Consensus 204 G~~s~~l~~~~g~~ 217 (830)
T 1pj5_A 204 GFWGAKIGAMIGMA 217 (830)
T ss_dssp GGGHHHHHHTTTCC
T ss_pred ccchHHHHHHhCCC
Confidence 999864 3445543
No 78
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.84 E-value=9.2e-05 Score=75.36 Aligned_cols=66 Identities=12% Similarity=0.135 Sum_probs=51.6
Q ss_pred echHHHHHHHHHHhhcCC-CceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCC
Q 013000 104 VENKVLHSSLLSCMQNTE-FQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGG 182 (451)
Q Consensus 104 i~R~~L~~~L~~~~~~~g-~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~ 182 (451)
.++..+.+.|...+.+.+ .+.++++++|++++. + +....+.|++.+|+++.||+||.|+|.
T Consensus 91 ~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~-----------~-------~~~~~w~V~~~~G~~~~ad~vV~AtG~ 152 (542)
T 1w4x_A 91 ASQPEILRYINFVADKFDLRSGITFHTTVTAAAF-----------D-------EATNTWTVDTNHGDRIRARYLIMASGQ 152 (542)
T ss_dssp CBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEE-----------E-------TTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred CCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEE-----------c-------CCCCeEEEEECCCCEEEeCEEEECcCC
Confidence 567888888877776653 257999999999976 0 123568899999999999999999999
Q ss_pred CChhh
Q 013000 183 KSRVR 187 (451)
Q Consensus 183 ~S~vR 187 (451)
+|.-+
T Consensus 153 ~s~p~ 157 (542)
T 1w4x_A 153 LSVPQ 157 (542)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 87543
No 79
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.83 E-value=2.3e-05 Score=74.16 Aligned_cols=60 Identities=15% Similarity=0.102 Sum_probs=47.2
Q ss_pred echHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccC--CC-eeEEEeCCCcEEEeeEEEeec
Q 013000 104 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTK--GH-LAKLDLSDGTSLYAKLVVGAD 180 (451)
Q Consensus 104 i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~v~v~~~dg~~~~adlvVgAD 180 (451)
+++..+.+.|.+.+.+.+ +++++ .+|+++.. . +. .+.|...+|+++.+|.||.|+
T Consensus 62 ~~~~~~~~~l~~~~~~~g-v~~~~-~~v~~i~~--------------------~~~~~~~~~v~~~~g~~~~~~~vv~At 119 (325)
T 2q7v_A 62 IAGMELAQRMHQQAEKFG-AKVEM-DEVQGVQH--------------------DATSHPYPFTVRGYNGEYRAKAVILAT 119 (325)
T ss_dssp BCHHHHHHHHHHHHHHTT-CEEEE-CCEEEEEE--------------------CTTSSSCCEEEEESSCEEEEEEEEECC
T ss_pred CCHHHHHHHHHHHHHHcC-CEEEe-eeEEEEEe--------------------ccCCCceEEEEECCCCEEEeCEEEECc
Confidence 456788888888888876 89988 58998865 1 12 266777788899999999999
Q ss_pred CCCCh
Q 013000 181 GGKSR 185 (451)
Q Consensus 181 G~~S~ 185 (451)
|.++.
T Consensus 120 G~~~~ 124 (325)
T 2q7v_A 120 GADPR 124 (325)
T ss_dssp CEEEC
T ss_pred CCCcC
Confidence 98654
No 80
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=97.83 E-value=0.0002 Score=70.50 Aligned_cols=49 Identities=16% Similarity=0.222 Sum_probs=38.6
Q ss_pred HHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCC
Q 013000 114 LSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 183 (451)
Q Consensus 114 ~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 183 (451)
.+.+.+..+ +|+++++|++++. .++.+.|++.+|+++.||.||.|-|..
T Consensus 210 ~~~~~~~~g-~i~~~~~V~~i~~--------------------~~~~v~v~~~~g~~~~ad~vi~a~~~~ 258 (431)
T 3k7m_X 210 VDAMSQEIP-EIRLQTVVTGIDQ--------------------SGDVVNVTVKDGHAFQAHSVIVATPMN 258 (431)
T ss_dssp HHHHHTTCS-CEESSCCEEEEEC--------------------SSSSEEEEETTSCCEEEEEEEECSCGG
T ss_pred HHHHHhhCC-ceEeCCEEEEEEE--------------------cCCeEEEEECCCCEEEeCEEEEecCcc
Confidence 333333334 8999999999976 446688999999889999999999953
No 81
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.81 E-value=3.2e-05 Score=73.15 Aligned_cols=64 Identities=19% Similarity=0.179 Sum_probs=51.9
Q ss_pred echHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCC
Q 013000 104 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 183 (451)
Q Consensus 104 i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 183 (451)
+.+..+...|.+.+.+.+ ++++++++|+++.. +.++.+.|.+.+|+ +.+|.||.|.|.+
T Consensus 64 ~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~i~~-------------------~~~~~~~v~~~~g~-~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 64 IRAQELINNLKEQMAKFD-QTICLEQAVESVEK-------------------QADGVFKLVTNEET-HYSKTVIITAGNG 122 (332)
T ss_dssp EEHHHHHHHHHHHHTTSC-CEEECSCCEEEEEE-------------------CTTSCEEEEESSEE-EEEEEEEECCTTS
T ss_pred CCHHHHHHHHHHHHHHhC-CcEEccCEEEEEEE-------------------CCCCcEEEEECCCE-EEeCEEEECCCCC
Confidence 457889999999998886 89999999999976 12236888888887 9999999999997
Q ss_pred Chhhh
Q 013000 184 SRVRE 188 (451)
Q Consensus 184 S~vR~ 188 (451)
|...+
T Consensus 123 ~~~p~ 127 (332)
T 3lzw_A 123 AFKPR 127 (332)
T ss_dssp CCEEC
T ss_pred cCCCC
Confidence 64333
No 82
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.77 E-value=0.0079 Score=60.59 Aligned_cols=43 Identities=9% Similarity=-0.021 Sum_probs=37.4
Q ss_pred ceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCCh
Q 013000 123 QKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 185 (451)
Q Consensus 123 v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 185 (451)
++|+++++|++++. .++.+.|.+.||+++.||.||.|.+.+..
T Consensus 227 ~~i~~~~~V~~i~~--------------------~~~~v~v~~~~g~~~~ad~VI~a~p~~~l 269 (520)
T 1s3e_A 227 DRVKLERPVIYIDQ--------------------TRENVLVETLNHEMYEAKYVISAIPPTLG 269 (520)
T ss_dssp GGEESSCCEEEEEC--------------------SSSSEEEEETTSCEEEESEEEECSCGGGG
T ss_pred CcEEcCCeeEEEEE--------------------CCCeEEEEECCCeEEEeCEEEECCCHHHH
Confidence 78999999999976 44568899999999999999999998763
No 83
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.76 E-value=5.8e-05 Score=70.07 Aligned_cols=62 Identities=10% Similarity=-0.056 Sum_probs=50.0
Q ss_pred echHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCC
Q 013000 104 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 183 (451)
Q Consensus 104 i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 183 (451)
.....+...|.+.+.+.++++++.+ +|+++.. .+..+.|.+.+|+++.+|.||.|+|.+
T Consensus 53 ~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i~~--------------------~~~~~~v~~~~g~~~~~d~vviAtG~~ 111 (297)
T 3fbs_A 53 KAPGEIIAEARRQIERYPTIHWVEG-RVTDAKG--------------------SFGEFIVEIDGGRRETAGRLILAMGVT 111 (297)
T ss_dssp CCHHHHHHHHHHHHTTCTTEEEEES-CEEEEEE--------------------ETTEEEEEETTSCEEEEEEEEECCCCE
T ss_pred CCHHHHHHHHHHHHHhcCCeEEEEe-EEEEEEE--------------------cCCeEEEEECCCCEEEcCEEEECCCCC
Confidence 4457888888898888755787655 9999876 345688999999999999999999997
Q ss_pred Chh
Q 013000 184 SRV 186 (451)
Q Consensus 184 S~v 186 (451)
+..
T Consensus 112 ~~~ 114 (297)
T 3fbs_A 112 DEL 114 (297)
T ss_dssp EEC
T ss_pred CCC
Confidence 654
No 84
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.73 E-value=2.7e-05 Score=73.83 Aligned_cols=60 Identities=13% Similarity=0.160 Sum_probs=49.1
Q ss_pred echHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeC---CCcEEEeeEEEeec
Q 013000 104 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS---DGTSLYAKLVVGAD 180 (451)
Q Consensus 104 i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg~~~~adlvVgAD 180 (451)
+.+..+...|.+.+.+.+ +++++++ |+++.. ....+.+... ++.++.+|.||.|+
T Consensus 81 ~~~~~~~~~~~~~~~~~g-v~i~~~~-v~~i~~--------------------~~~~~~v~~~~~~~~~~~~~d~vvlAt 138 (338)
T 3itj_A 81 LTGSELMDRMREQSTKFG-TEIITET-VSKVDL--------------------SSKPFKLWTEFNEDAEPVTTDAIILAT 138 (338)
T ss_dssp EEHHHHHHHHHHHHHHTT-CEEECSC-EEEEEC--------------------SSSSEEEEETTCSSSCCEEEEEEEECC
T ss_pred CCHHHHHHHHHHHHHHcC-CEEEEeE-EEEEEE--------------------cCCEEEEEEEecCCCcEEEeCEEEECc
Confidence 567888899999998886 8999998 999865 4466777773 67789999999999
Q ss_pred CCCCh
Q 013000 181 GGKSR 185 (451)
Q Consensus 181 G~~S~ 185 (451)
|.++.
T Consensus 139 G~~~~ 143 (338)
T 3itj_A 139 GASAK 143 (338)
T ss_dssp CEEEC
T ss_pred CCCcC
Confidence 98654
No 85
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.71 E-value=6.1e-05 Score=70.78 Aligned_cols=59 Identities=10% Similarity=0.079 Sum_probs=48.7
Q ss_pred echHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCC
Q 013000 104 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 183 (451)
Q Consensus 104 i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 183 (451)
+....+...|.+.+.+.+ +++++ ++|+++.. .+..+.|...+|.++.+|.||.|.|..
T Consensus 67 ~~~~~~~~~~~~~~~~~~-v~~~~-~~v~~i~~--------------------~~~~~~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 67 IQASDMIKVFNKHIEKYE-VPVLL-DIVEKIEN--------------------RGDEFVVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp EEHHHHHHHHHHHHHTTT-CCEEE-SCEEEEEE--------------------C--CEEEEESSSCEEEEEEEEECCCCE
T ss_pred CCHHHHHHHHHHHHHHcC-CEEEE-EEEEEEEe--------------------cCCEEEEEECCCCEEEcCEEEECcCCC
Confidence 556788888888888876 89999 89999976 345688888898999999999999987
Q ss_pred C
Q 013000 184 S 184 (451)
Q Consensus 184 S 184 (451)
.
T Consensus 125 ~ 125 (323)
T 3f8d_A 125 R 125 (323)
T ss_dssp E
T ss_pred C
Confidence 4
No 86
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.71 E-value=6.2e-05 Score=70.93 Aligned_cols=59 Identities=12% Similarity=0.066 Sum_probs=45.9
Q ss_pred echHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCC
Q 013000 104 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 183 (451)
Q Consensus 104 i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 183 (451)
+.+..+.+.|.+.+.+.+ +++++ .+|+++.. .+..+.|.. ++.++.+|.||.|+|.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~-v~~~~-~~v~~i~~--------------------~~~~~~v~~-~~~~~~~~~li~AtG~~ 125 (319)
T 3cty_A 69 IVGSELAKLFADHAANYA-KIREG-VEVRSIKK--------------------TQGGFDIET-NDDTYHAKYVIITTGTT 125 (319)
T ss_dssp BCHHHHHHHHHHHHHTTS-EEEET-CCEEEEEE--------------------ETTEEEEEE-SSSEEEEEEEEECCCEE
T ss_pred cCHHHHHHHHHHHHHHcC-CEEEE-eeEEEEEE--------------------eCCEEEEEE-CCCEEEeCEEEECCCCC
Confidence 456678888888888876 89988 68999865 334566666 66789999999999986
Q ss_pred Ch
Q 013000 184 SR 185 (451)
Q Consensus 184 S~ 185 (451)
+.
T Consensus 126 ~~ 127 (319)
T 3cty_A 126 HK 127 (319)
T ss_dssp EC
T ss_pred cc
Confidence 54
No 87
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.70 E-value=0.00012 Score=69.91 Aligned_cols=51 Identities=16% Similarity=0.098 Sum_probs=42.0
Q ss_pred eeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecC
Q 013000 102 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADG 181 (451)
Q Consensus 102 ~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG 181 (451)
..++...+.+.|.+.+++.| ++|+. ++|++++. .+ .+.||.||.|+|
T Consensus 137 ~~v~p~~~~~~l~~~~~~~G-v~i~~-~~V~~i~~--------------------~~-----------~~~a~~VV~A~G 183 (351)
T 3g3e_A 137 LILEGKNYLQWLTERLTERG-VKFFQ-RKVESFEE--------------------VA-----------REGADVIVNCTG 183 (351)
T ss_dssp EEECHHHHHHHHHHHHHHTT-CEEEE-CCCCCHHH--------------------HH-----------HTTCSEEEECCG
T ss_pred eEEcHHHHHHHHHHHHHHCC-CEEEE-EEeCCHHH--------------------hh-----------cCCCCEEEECCC
Confidence 56788999999999999987 89988 88888743 10 157999999999
Q ss_pred CCCh
Q 013000 182 GKSR 185 (451)
Q Consensus 182 ~~S~ 185 (451)
.+|.
T Consensus 184 ~~s~ 187 (351)
T 3g3e_A 184 VWAG 187 (351)
T ss_dssp GGGG
T ss_pred cChH
Confidence 9985
No 88
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.69 E-value=0.00013 Score=75.07 Aligned_cols=64 Identities=19% Similarity=0.164 Sum_probs=50.6
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCe-eEE--E-eCCCc--EEEeeEEEeec
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL-AKL--D-LSDGT--SLYAKLVVGAD 180 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~v--~-~~dg~--~~~adlvVgAD 180 (451)
..|...|.+.+.+.++++|+.++.|+++.. .++. +.| . ..+|+ .+.|+.||.|+
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~--------------------~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAt 193 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILV--------------------DDGHVRGLVAMNMMEGTLVQIRANAVVMAT 193 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEE--------------------ETTEEEEEEEEETTTTEEEEEECSCEEECC
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEE--------------------eCCEEEEEEEEEcCCCcEEEEEcCeEEECC
Confidence 578899999998887699999999999976 2232 223 2 36776 79999999999
Q ss_pred CCCChhhhhh
Q 013000 181 GGKSRVRELA 190 (451)
Q Consensus 181 G~~S~vR~~l 190 (451)
|..|.++...
T Consensus 194 Gg~s~~~~~~ 203 (602)
T 1kf6_A 194 GGAGRVYRYN 203 (602)
T ss_dssp CCCGGGSSSB
T ss_pred CCCcccccCc
Confidence 9999987654
No 89
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.68 E-value=7.8e-05 Score=75.89 Aligned_cols=64 Identities=19% Similarity=0.207 Sum_probs=52.4
Q ss_pred eechHHHHHHHHHHhhcCCCc--eEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeec
Q 013000 103 VVENKVLHSSLLSCMQNTEFQ--KTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGAD 180 (451)
Q Consensus 103 ~i~R~~L~~~L~~~~~~~g~v--~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgAD 180 (451)
..++..+.+.|.+.+.+.+ + .++++++|+++.. + +....+.|++.+|+++.+|.||.|+
T Consensus 95 ~~~~~ei~~yl~~~~~~~g-~~~~i~~~~~V~~i~~-----------~-------~~~~~w~V~~~~G~~i~ad~lV~At 155 (549)
T 4ap3_A 95 YATQPEILAYLEHVADRFD-LRRDIRFDTRVTSAVL-----------D-------EEGLRWTVRTDRGDEVSARFLVVAA 155 (549)
T ss_dssp SCBHHHHHHHHHHHHHHTT-CGGGEECSCCEEEEEE-----------E-------TTTTEEEEEETTCCEEEEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHHcC-CCccEEECCEEEEEEE-----------c-------CCCCEEEEEECCCCEEEeCEEEECc
Confidence 3567889998988888876 5 8999999999976 1 1235789999999999999999999
Q ss_pred CCCCh
Q 013000 181 GGKSR 185 (451)
Q Consensus 181 G~~S~ 185 (451)
|..|.
T Consensus 156 G~~s~ 160 (549)
T 4ap3_A 156 GPLSN 160 (549)
T ss_dssp CSEEE
T ss_pred CCCCC
Confidence 97664
No 90
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.68 E-value=5.7e-05 Score=71.11 Aligned_cols=59 Identities=15% Similarity=0.254 Sum_probs=46.3
Q ss_pred echHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCC
Q 013000 104 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 183 (451)
Q Consensus 104 i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 183 (451)
+.+..+...|.+.+.+.+ +++++++ |+.+.. .+..+.| ..+|.++.+|.||.|+|.+
T Consensus 59 ~~~~~~~~~~~~~~~~~~-~~~~~~~-v~~i~~--------------------~~~~~~v-~~~~~~~~~~~lv~AtG~~ 115 (320)
T 1trb_A 59 LTGPLLMERMHEHATKFE-TEIIFDH-INKVDL--------------------QNRPFRL-NGDNGEYTCDALIIATGAS 115 (320)
T ss_dssp CBHHHHHHHHHHHHHHTT-CEEECCC-EEEEEC--------------------SSSSEEE-EESSCEEEEEEEEECCCEE
T ss_pred CCHHHHHHHHHHHHHHCC-CEEEEee-eeEEEe--------------------cCCEEEE-EeCCCEEEcCEEEECCCCC
Confidence 456778888888887776 8999986 888865 3345666 6688899999999999986
Q ss_pred Ch
Q 013000 184 SR 185 (451)
Q Consensus 184 S~ 185 (451)
+.
T Consensus 116 ~~ 117 (320)
T 1trb_A 116 AR 117 (320)
T ss_dssp EC
T ss_pred cC
Confidence 54
No 91
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.66 E-value=0.00017 Score=72.77 Aligned_cols=59 Identities=19% Similarity=0.251 Sum_probs=44.7
Q ss_pred HHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeC-CCc--EEEee-EEEeecCCC
Q 013000 108 VLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS-DGT--SLYAK-LVVGADGGK 183 (451)
Q Consensus 108 ~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-dg~--~~~ad-lvVgADG~~ 183 (451)
.|.+.|.+.+++.+ ++|+++++|+++.. ++ ++..+.|... +|. ++.|| .||.|.|..
T Consensus 203 ~l~~~L~~~~~~~G-v~i~~~t~v~~L~~-----------~~-------~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~ 263 (510)
T 4at0_A 203 MLMKPLVETAEKLG-VRAEYDMRVQTLVT-----------DD-------TGRVVGIVAKQYGKEVAVRARRGVVLATGSF 263 (510)
T ss_dssp HHHHHHHHHHHHTT-CEEECSEEEEEEEE-----------CT-------TCCEEEEEEEETTEEEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHcC-CEEEecCEeEEEEE-----------CC-------CCcEEEEEEEECCcEEEEEeCCeEEEeCCCh
Confidence 89999999999886 99999999999986 00 1233335443 333 68995 999999998
Q ss_pred Ch
Q 013000 184 SR 185 (451)
Q Consensus 184 S~ 185 (451)
|.
T Consensus 264 ~~ 265 (510)
T 4at0_A 264 AY 265 (510)
T ss_dssp TT
T ss_pred hh
Confidence 84
No 92
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.66 E-value=3.9e-05 Score=76.51 Aligned_cols=66 Identities=12% Similarity=0.106 Sum_probs=50.4
Q ss_pred eechHHHHHHHHHHhhcCCCce--EEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCC---C--cEEEeeE
Q 013000 103 VVENKVLHSSLLSCMQNTEFQK--TIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSD---G--TSLYAKL 175 (451)
Q Consensus 103 ~i~R~~L~~~L~~~~~~~g~v~--i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d---g--~~~~adl 175 (451)
.+++..+.+.|.+.+.+.+ ++ ++++++|++++. . .+.+.+.|++.+ | .++.+|.
T Consensus 97 ~~~~~~l~~~l~~~~~~~g-v~~~i~~~~~V~~v~~-----------~-------~~~~~~~V~~~~~~~g~~~~~~~d~ 157 (464)
T 2xve_A 97 YPPREVLWDYIKGRVEKAG-VRKYIRFNTAVRHVEF-----------N-------EDSQTFTVTVQDHTTDTIYSEEFDY 157 (464)
T ss_dssp SCBHHHHHHHHHHHHHHHT-CGGGEECSEEEEEEEE-----------E-------TTTTEEEEEEEETTTTEEEEEEESE
T ss_pred CCCHHHHHHHHHHHHHHcC-CcceEEeCCEEEEEEE-----------c-------CCCCcEEEEEEEcCCCceEEEEcCE
Confidence 4678899999999888776 77 999999999976 0 012356777654 4 4789999
Q ss_pred EEeecCCCChhh
Q 013000 176 VVGADGGKSRVR 187 (451)
Q Consensus 176 vVgADG~~S~vR 187 (451)
||.|+|.+|.-+
T Consensus 158 VVvAtG~~s~p~ 169 (464)
T 2xve_A 158 VVCCTGHFSTPY 169 (464)
T ss_dssp EEECCCSSSSBC
T ss_pred EEECCCCCCCCc
Confidence 999999877654
No 93
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.63 E-value=0.00012 Score=68.61 Aligned_cols=64 Identities=20% Similarity=0.308 Sum_probs=50.1
Q ss_pred echHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCC
Q 013000 104 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 183 (451)
Q Consensus 104 i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 183 (451)
.++..+...|.+.+.+.+ ++++.+++|+.+.. ... .+..+.|.+.+|+++.+|.||.|+|.+
T Consensus 53 ~~~~~~~~~~~~~~~~~~-v~~~~~~~v~~i~~---------~~~--------~~~~~~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 53 TEGQKLAGALKVHVDEYD-VDVIDSQSASKLIP---------AAV--------EGGLHQIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp EEHHHHHHHHHHHHHTSC-EEEECSCCEEEEEC---------CSS--------TTCCEEEEETTSCEEEEEEEEECCCEE
T ss_pred CCHHHHHHHHHHHHHHcC-CeEEccCEEEEEEe---------ccc--------CCceEEEEECCCCEEEeCEEEECcCCC
Confidence 356778888888888776 99999999999864 000 124678888899899999999999987
Q ss_pred Ch
Q 013000 184 SR 185 (451)
Q Consensus 184 S~ 185 (451)
+.
T Consensus 115 ~~ 116 (310)
T 1fl2_A 115 WR 116 (310)
T ss_dssp EC
T ss_pred cC
Confidence 54
No 94
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=97.60 E-value=0.00042 Score=69.64 Aligned_cols=65 Identities=17% Similarity=0.294 Sum_probs=46.2
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCChh
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 186 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 186 (451)
..|-+.|.+.+++.| ++|+++++|++|+. +++..+.|+++||+++.||.||.+-+.....
T Consensus 221 ~~l~~aL~~~~~~~G-g~I~~~~~V~~I~~-------------------~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~ 280 (501)
T 4dgk_A 221 GALVQGMIKLFQDLG-GEVVLNARVSHMET-------------------TGNKIEAVHLEDGRRFLTQAVASNADVVHTY 280 (501)
T ss_dssp HHHHHHHHHHHHHTT-CEEECSCCEEEEEE-------------------ETTEEEEEEETTSCEEECSCEEECCC-----
T ss_pred cchHHHHHHHHHHhC-CceeeecceeEEEe-------------------eCCeEEEEEecCCcEEEcCEEEECCCHHHHH
Confidence 567888999999987 89999999999987 2334455899999999999999877777666
Q ss_pred hhhhC
Q 013000 187 RELAG 191 (451)
Q Consensus 187 R~~l~ 191 (451)
++.+.
T Consensus 281 ~~Ll~ 285 (501)
T 4dgk_A 281 RDLLS 285 (501)
T ss_dssp -----
T ss_pred HHhcc
Confidence 66653
No 95
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.59 E-value=9.1e-05 Score=70.35 Aligned_cols=59 Identities=19% Similarity=0.134 Sum_probs=46.1
Q ss_pred echHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEE-EeCCCcEEEeeEEEeecCC
Q 013000 104 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKL-DLSDGTSLYAKLVVGADGG 182 (451)
Q Consensus 104 i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v-~~~dg~~~~adlvVgADG~ 182 (451)
+.+..+...|.+.+.+.+ +++++++ |+++.. ...+.| .+.+|+++.+|.||.|+|.
T Consensus 68 ~~~~~~~~~l~~~~~~~~-v~~~~~~-v~~i~~---------------------~~~~~v~~~~~g~~~~~d~lviAtG~ 124 (335)
T 2a87_A 68 ITGPELMDEMREQALRFG-ADLRMED-VESVSL---------------------HGPLKSVVTADGQTHRARAVILAMGA 124 (335)
T ss_dssp BCHHHHHHHHHHHHHHTT-CEEECCC-EEEEEC---------------------SSSSEEEEETTSCEEEEEEEEECCCE
T ss_pred CCHHHHHHHHHHHHHHcC-CEEEEee-EEEEEe---------------------CCcEEEEEeCCCCEEEeCEEEECCCC
Confidence 556778888888887776 8999986 888742 134566 6778889999999999998
Q ss_pred CCh
Q 013000 183 KSR 185 (451)
Q Consensus 183 ~S~ 185 (451)
++.
T Consensus 125 ~~~ 127 (335)
T 2a87_A 125 AAR 127 (335)
T ss_dssp EEC
T ss_pred Ccc
Confidence 654
No 96
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.55 E-value=0.00016 Score=69.47 Aligned_cols=60 Identities=10% Similarity=0.092 Sum_probs=48.4
Q ss_pred echHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCC
Q 013000 104 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 183 (451)
Q Consensus 104 i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 183 (451)
+++..+...|.+.+.+.+ ++++++++|+++.. .++.+.|...+| ++.+|.||.|.|.+
T Consensus 85 ~~~~~~~~~l~~~~~~~g-v~i~~~~~v~~i~~--------------------~~~~~~v~~~~g-~~~~d~vVlAtG~~ 142 (369)
T 3d1c_A 85 ISGETYAEYLQVVANHYE-LNIFENTVVTNISA--------------------DDAYYTIATTTE-TYHADYIFVATGDY 142 (369)
T ss_dssp CBHHHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------CSSSEEEEESSC-CEEEEEEEECCCST
T ss_pred CCHHHHHHHHHHHHHHcC-CeEEeCCEEEEEEE--------------------CCCeEEEEeCCC-EEEeCEEEECCCCC
Confidence 566778888888887776 89999999999976 334577877777 58999999999998
Q ss_pred Ch
Q 013000 184 SR 185 (451)
Q Consensus 184 S~ 185 (451)
+.
T Consensus 143 ~~ 144 (369)
T 3d1c_A 143 NF 144 (369)
T ss_dssp TS
T ss_pred Cc
Confidence 64
No 97
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.54 E-value=0.00012 Score=74.54 Aligned_cols=64 Identities=11% Similarity=0.177 Sum_probs=51.2
Q ss_pred echHHHHHHHHHHhhcCCCc--eEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecC
Q 013000 104 VENKVLHSSLLSCMQNTEFQ--KTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADG 181 (451)
Q Consensus 104 i~R~~L~~~L~~~~~~~g~v--~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG 181 (451)
.++..+...|.+.+.+.+ + .++++++|+++.. + +....+.|++.+|+++.||.||.|+|
T Consensus 84 ~~~~ei~~yl~~~~~~~~-l~~~i~~~~~V~~~~~-----------~-------~~~~~w~V~~~~G~~~~ad~lV~AtG 144 (545)
T 3uox_A 84 ASQPEMLRYVNRAADAMD-VRKHYRFNTRVTAARY-----------V-------ENDRLWEVTLDNEEVVTCRFLISATG 144 (545)
T ss_dssp CBHHHHHHHHHHHHHHHT-CGGGEECSCCEEEEEE-----------E-------GGGTEEEEEETTTEEEEEEEEEECCC
T ss_pred CCHHHHHHHHHHHHHHcC-CcCcEEECCEEEEEEE-----------e-------CCCCEEEEEECCCCEEEeCEEEECcC
Confidence 567888888888887765 4 7999999999976 1 13357899999999999999999999
Q ss_pred CCChh
Q 013000 182 GKSRV 186 (451)
Q Consensus 182 ~~S~v 186 (451)
..|.-
T Consensus 145 ~~s~p 149 (545)
T 3uox_A 145 PLSAS 149 (545)
T ss_dssp SCBC-
T ss_pred CCCCC
Confidence 87653
No 98
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.53 E-value=0.00082 Score=68.71 Aligned_cols=68 Identities=15% Similarity=0.119 Sum_probs=51.3
Q ss_pred echHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCe-eEEEeC---CCc--EEEeeEEE
Q 013000 104 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL-AKLDLS---DGT--SLYAKLVV 177 (451)
Q Consensus 104 i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~v~~~---dg~--~~~adlvV 177 (451)
++-..|...|.+.+.+.| ++|+.+++|++++. .++. +.|.+. +|+ ++.||.||
T Consensus 185 v~~~~l~~~l~~~a~~~G-a~i~~~t~V~~l~~--------------------~~~~v~gV~~~d~~tg~~~~i~A~~VV 243 (571)
T 2rgh_A 185 NNDARLVIDNIKKAAEDG-AYLVSKMKAVGFLY--------------------EGDQIVGVKARDLLTDEVIEIKAKLVI 243 (571)
T ss_dssp CCHHHHHHHHHHHHHHTT-CEEESSEEEEEEEE--------------------ETTEEEEEEEEETTTCCEEEEEBSCEE
T ss_pred EchHHHHHHHHHHHHHcC-CeEEeccEEEEEEE--------------------eCCEEEEEEEEEcCCCCEEEEEcCEEE
Confidence 556778888889888887 89999999999976 2233 345543 343 79999999
Q ss_pred eecCCCCh-hhhhhCC
Q 013000 178 GADGGKSR-VRELAGF 192 (451)
Q Consensus 178 gADG~~S~-vR~~l~~ 192 (451)
.|.|.+|. +++..+.
T Consensus 244 ~AaG~ws~~l~~~~g~ 259 (571)
T 2rgh_A 244 NTSGPWVDKVRNLNFT 259 (571)
T ss_dssp ECCGGGHHHHHTTCCS
T ss_pred ECCChhHHHHHHhhcc
Confidence 99999984 5665554
No 99
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.51 E-value=0.0005 Score=69.00 Aligned_cols=59 Identities=15% Similarity=0.086 Sum_probs=47.3
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCCh
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 185 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 185 (451)
..|.+.|.+.+.+.|+++|+++++|++++. .++.+.|++.+|+++.||.||.|-|....
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~--------------------~~~~v~v~~~~g~~~~ad~vI~a~~~~~l 313 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVN--------------------ERDAARVTARDGREFVAKRVVCTIPLNVL 313 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEE--------------------CSSSEEEEETTCCEEEEEEEEECCCGGGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEE--------------------cCCEEEEEECCCCEEEcCEEEECCCHHHH
Confidence 355666777777665488999999999976 34568899999989999999999997544
No 100
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.46 E-value=0.00033 Score=69.86 Aligned_cols=62 Identities=18% Similarity=0.126 Sum_probs=45.4
Q ss_pred hHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCee-EEEeCC-CcEEEeeEEEeecCCC
Q 013000 106 NKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLA-KLDLSD-GTSLYAKLVVGADGGK 183 (451)
Q Consensus 106 R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~v~~~d-g~~~~adlvVgADG~~ 183 (451)
...+.+.|.+.+++.+ ++++.+++| ++.. .++.+ .+...+ +.++.+|.||.|+|..
T Consensus 118 g~~l~~~L~~~~~~~g-v~i~~~~~v-~l~~--------------------~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~ 175 (472)
T 2e5v_A 118 GREIFNFLLKLAREEG-IPIIEDRLV-EIRV--------------------KDGKVTGFVTEKRGLVEDVDKLVLATGGY 175 (472)
T ss_dssp HHHHHHHHHHHHHHTT-CCEECCCEE-EEEE--------------------ETTEEEEEEETTTEEECCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHhCC-CEEEECcEE-EEEE--------------------eCCEEEEEEEEeCCCeEEeeeEEECCCCC
Confidence 4678888998886665 999999999 9865 22333 344332 2247799999999999
Q ss_pred Chhhhh
Q 013000 184 SRVREL 189 (451)
Q Consensus 184 S~vR~~ 189 (451)
|.++..
T Consensus 176 ~~~~~~ 181 (472)
T 2e5v_A 176 SYLYEY 181 (472)
T ss_dssp GGGSSS
T ss_pred cccCcc
Confidence 988754
No 101
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.38 E-value=0.056 Score=53.16 Aligned_cols=50 Identities=8% Similarity=0.011 Sum_probs=38.2
Q ss_pred HHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCe-eEEEeCCCcEEEeeEEEeecCCC
Q 013000 109 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL-AKLDLSDGTSLYAKLVVGADGGK 183 (451)
Q Consensus 109 L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~v~~~dg~~~~adlvVgADG~~ 183 (451)
|.+.|.+.+ | ++|+++++|+++.. .++. +.|+. +|.++.||.||.|-+..
T Consensus 217 l~~~l~~~l---g-~~i~~~~~V~~i~~--------------------~~~~~v~v~~-~~~~~~ad~VI~a~p~~ 267 (453)
T 2yg5_A 217 VSIRMAEAL---G-DDVFLNAPVRTVKW--------------------NESGATVLAD-GDIRVEASRVILAVPPN 267 (453)
T ss_dssp HHHHHHHHH---G-GGEECSCCEEEEEE--------------------ETTEEEEEET-TTEEEEEEEEEECSCGG
T ss_pred HHHHHHHhc---C-CcEEcCCceEEEEE--------------------eCCceEEEEE-CCeEEEcCEEEEcCCHH
Confidence 344444443 4 79999999999976 3455 77776 77889999999999886
No 102
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.37 E-value=0.0029 Score=63.49 Aligned_cols=34 Identities=9% Similarity=0.206 Sum_probs=29.0
Q ss_pred CCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhh
Q 013000 330 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIA 369 (451)
Q Consensus 330 g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~ 369 (451)
+++.+.||+.+ |.|++-|+.+|..+|+.|...+.
T Consensus 461 ~~l~~aG~~~~------g~~v~gai~sG~~aA~~il~~l~ 494 (504)
T 1sez_A 461 PGLFYAGNHRG------GLSVGKALSSGCNAADLVISYLE 494 (504)
T ss_dssp TTEEECCSSSS------CSSHHHHHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeecCC------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 78999999875 46889999999999999987664
No 103
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.32 E-value=0.00045 Score=70.14 Aligned_cols=69 Identities=19% Similarity=0.123 Sum_probs=43.3
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeC---CCc--EEEeeEEEeecC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS---DGT--SLYAKLVVGADG 181 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg~--~~~adlvVgADG 181 (451)
..+.+.|.+.+.+..+++|++++.|+++..+ +++.. ...+....|... +|+ ++.|+.||.|+|
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~---------~~g~~---~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtG 205 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVS---------DKIGL---PGTRRVVGAWVWNRNKETVETCHAKAVVLATG 205 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEG---------GGTTC---CSSCBEEEEEEEETTTTEEEEEECSEEEECCC
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEc---------CCCCc---ccCCEEEEEEEEEcCCCcEEEEEcCeEEECCC
Confidence 4677888888887435999999999999751 00000 000022334443 575 789999999999
Q ss_pred CCChhh
Q 013000 182 GKSRVR 187 (451)
Q Consensus 182 ~~S~vR 187 (451)
..|.+-
T Consensus 206 g~~~~~ 211 (540)
T 1chu_A 206 GASKVY 211 (540)
T ss_dssp CCGGGS
T ss_pred Cccccc
Confidence 999863
No 104
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.31 E-value=0.00045 Score=69.89 Aligned_cols=64 Identities=22% Similarity=0.333 Sum_probs=50.5
Q ss_pred echHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCC
Q 013000 104 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 183 (451)
Q Consensus 104 i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 183 (451)
..+..+...|.+.+.+.+ ++++.+++|+++.. .. +.++.+.|.+.+|.++.+|.||.|+|.+
T Consensus 264 ~~~~~l~~~l~~~~~~~g-v~v~~~~~v~~i~~---------~~--------~~~~~~~V~~~~g~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 264 TEGQKLAGALKAHVSDYD-VDVIDSQSASKLVP---------AA--------TEGGLHQIETASGAVLKARSIIIATGAK 325 (521)
T ss_dssp BCHHHHHHHHHHHHHTSC-EEEECSCCEEEEEC---------CS--------STTSCEEEEETTSCEEEEEEEEECCCEE
T ss_pred CCHHHHHHHHHHHHHHcC-CEEEcCCEEEEEEe---------cc--------CCCceEEEEECCCCEEEcCEEEECCCCC
Confidence 356788888888888876 99999999999964 00 0124678888899999999999999986
Q ss_pred Ch
Q 013000 184 SR 185 (451)
Q Consensus 184 S~ 185 (451)
+.
T Consensus 326 ~~ 327 (521)
T 1hyu_A 326 WR 327 (521)
T ss_dssp EC
T ss_pred cC
Confidence 53
No 105
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.30 E-value=0.00011 Score=73.11 Aligned_cols=132 Identities=14% Similarity=0.065 Sum_probs=74.8
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCceeeecH---HHHHHHHHCCCchhhhhhhcccccEE
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTP---ATISFFKEIGAWQYVQQHRHAYFDKM 77 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~~~~~~~~~~~~~~~g~~l~~---~~~~~L~~lgl~~~~~~~~~~~~~~~ 77 (451)
|||+++|+.|++. |++|+|||+.... |..+.. ....++...++++.+..... . .++
T Consensus 13 ~aGl~aA~~l~~~----G~~V~liE~~~~g---------------G~~~~~g~~psk~ll~~~~~~~~~~~~~~-~-~g~ 71 (464)
T 2a8x_A 13 PGGYVAAIRAAQL----GLSTAIVEPKYWG---------------GVCLNVGCIPSKALLRNAELVHIFTKDAK-A-FGI 71 (464)
T ss_dssp HHHHHHHHHHHHT----TCCEEEECSSCTT---------------HHHHHHSHHHHHHHHHHHHHHHHHHHHTT-T-TTE
T ss_pred HHHHHHHHHHHhC----CCeEEEEeCCCCC---------------CcccccCchhhHHHHHHHHHHHHHHHHHH-h-cCC
Confidence 6899999999994 9999999998321 222211 12334444444444431111 1 112
Q ss_pred EEEeCCCcceeEeecCCCCCccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccC
Q 013000 78 QVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTK 157 (451)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (451)
. +. ....+.. .... .... ...+.+.|.+.+.+.+ ++++.++.+. + +
T Consensus 72 ~--~~---~~~~~~~--~~~~-~~~~--~~~l~~~l~~~~~~~g-v~~~~g~~~~-i----------------------d 117 (464)
T 2a8x_A 72 S--GE---VTFDYGI--AYDR-SRKV--AEGRVAGVHFLMKKNK-ITEIHGYGTF-A----------------------D 117 (464)
T ss_dssp E--EC---CEECHHH--HHHH-HHHH--HHHHHHHHHHHHHHTT-CEEECEEEEE-S----------------------S
T ss_pred C--CC---CccCHHH--HHHH-HHHH--HHHHHHHHHHHHHhCC-CEEEEeEEEE-e----------------------c
Confidence 1 10 0111110 0000 0000 1345556666666655 9999987653 3 2
Q ss_pred CCeeEEEeCCC--cEEEeeEEEeecCCCChhh
Q 013000 158 GHLAKLDLSDG--TSLYAKLVVGADGGKSRVR 187 (451)
Q Consensus 158 ~~~v~v~~~dg--~~~~adlvVgADG~~S~vR 187 (451)
+..+.|...+| .++.+|.||.|+|.++.+.
T Consensus 118 ~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~ 149 (464)
T 2a8x_A 118 ANTLLVDLNDGGTESVTFDNAIIATGSSTRLV 149 (464)
T ss_dssp SSEEEEEETTSCCEEEEEEEEEECCCEEECCC
T ss_pred CCeEEEEeCCCceEEEEcCEEEECCCCCCCCC
Confidence 35688888888 6899999999999987543
No 106
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.28 E-value=0.0018 Score=68.39 Aligned_cols=40 Identities=18% Similarity=0.142 Sum_probs=35.3
Q ss_pred ceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCC
Q 013000 123 QKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGG 182 (451)
Q Consensus 123 v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~ 182 (451)
++|+++++|++|+. .++++.|++.||+++.||.||.|-..
T Consensus 544 l~I~l~t~V~~I~~--------------------~~~~v~V~~~~G~~i~Ad~VIvA~P~ 583 (776)
T 4gut_A 544 LDIQLKSPVQCIDY--------------------SGDEVQVTTTDGTGYSAQKVLVTVPL 583 (776)
T ss_dssp SCEESSCCEEEEEC--------------------SSSSEEEEETTCCEEEESEEEECCCH
T ss_pred CcEEcCCeeEEEEE--------------------cCCEEEEEECCCcEEEcCEEEECCCH
Confidence 78999999999976 45669999999999999999999864
No 107
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.27 E-value=0.00041 Score=68.95 Aligned_cols=65 Identities=11% Similarity=0.127 Sum_probs=48.8
Q ss_pred eechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCe--eEEEeCCCc----EEEeeEE
Q 013000 103 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL--AKLDLSDGT----SLYAKLV 176 (451)
Q Consensus 103 ~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~v~~~dg~----~~~adlv 176 (451)
...|..+.+.|...+.+.+ ++++++++|++++. ..+ .+.. +.|...+|. ++.+|.|
T Consensus 123 ~~~~~~~~~~l~~~~~~~~-~~i~~~~~V~~i~~---------~~~--------~~~~~~~~V~~~~g~g~~~~~~~d~l 184 (463)
T 3s5w_A 123 YPCRMEFNDYLRWVASHFQ-EQSRYGEEVLRIEP---------MLS--------AGQVEALRVISRNADGEELVRTTRAL 184 (463)
T ss_dssp CCBHHHHHHHHHHHHTTCT-TTEEESEEEEEEEE---------EEE--------TTEEEEEEEEEEETTSCEEEEEESEE
T ss_pred CCCHHHHHHHHHHHHHHcC-CeEEeCCEEEEEEE---------ecC--------CCceEEEEEEEecCCCceEEEEeCEE
Confidence 3568889999988888776 89999999999975 000 0222 477777775 8999999
Q ss_pred EeecCCCCh
Q 013000 177 VGADGGKSR 185 (451)
Q Consensus 177 VgADG~~S~ 185 (451)
|.|+|....
T Consensus 185 VlAtG~~p~ 193 (463)
T 3s5w_A 185 VVSPGGTPR 193 (463)
T ss_dssp EECCCCEEC
T ss_pred EECCCCCCC
Confidence 999998443
No 108
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.17 E-value=0.0015 Score=67.14 Aligned_cols=60 Identities=22% Similarity=0.189 Sum_probs=46.5
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEe---CCCc--EEEeeEEEeecC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDL---SDGT--SLYAKLVVGADG 181 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~---~dg~--~~~adlvVgADG 181 (451)
..+...|.+.+.+.+ ++|+.++.|+++.. +++....|.. .+|+ .+.|+.||.|+|
T Consensus 155 ~~l~~~L~~~~~~~g-v~i~~~~~v~~Li~-------------------~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATG 214 (621)
T 2h88_A 155 HSLLHTLYGRSLRYD-TSYFVEYFALDLLM-------------------ENGECRGVIALCIEDGTIHRFRAKNTVIATG 214 (621)
T ss_dssp HHHHHHHHHHHTTSC-CEEEETEEEEEEEE-------------------ETTEEEEEEEEETTTCCEEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHhCC-CEEEEceEEEEEEE-------------------ECCEEEEEEEEEcCCCcEEEEEcCeEEECCC
Confidence 478899999998876 99999999999976 1222223433 4675 689999999999
Q ss_pred CCChh
Q 013000 182 GKSRV 186 (451)
Q Consensus 182 ~~S~v 186 (451)
..|.+
T Consensus 215 G~~~~ 219 (621)
T 2h88_A 215 GYGRT 219 (621)
T ss_dssp CCGGG
T ss_pred ccccc
Confidence 99875
No 109
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.16 E-value=0.00098 Score=64.52 Aligned_cols=66 Identities=23% Similarity=0.232 Sum_probs=52.3
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCChh
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 186 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 186 (451)
..+.+.|.+.+++.| ++++.+++|++++. .++.+.|.+.||+++.+|.||.|.|.++..
T Consensus 187 ~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~--------------------~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 187 PAAAKAVQAGLEGLG-VRFHLGPVLASLKK--------------------AGEGLEAHLSDGEVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp HHHHHHHHHHHHTTT-CEEEESCCEEEEEE--------------------ETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHcC-CEEEeCCEEEEEEe--------------------cCCEEEEEECCCCEEECCEEEECcCCCcCH
Confidence 456777788887776 99999999999975 345688889999999999999999987654
Q ss_pred --hhhhCCC
Q 013000 187 --RELAGFK 193 (451)
Q Consensus 187 --R~~l~~~ 193 (451)
-+.++..
T Consensus 246 ~l~~~~g~~ 254 (384)
T 2v3a_A 246 ELAFAAGLA 254 (384)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHCCCC
Confidence 3444544
No 110
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.09 E-value=0.0036 Score=64.11 Aligned_cols=61 Identities=16% Similarity=0.173 Sum_probs=46.3
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEe---CCCc--EEEeeEEEeecC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDL---SDGT--SLYAKLVVGADG 181 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~---~dg~--~~~adlvVgADG 181 (451)
..+.+.|.+.+.+.+ ++|++++.|+++.. ++ ++..+.|.. .+|+ ++.|+.||.|+|
T Consensus 143 ~~l~~~L~~~~~~~g-v~i~~~~~v~~L~~-----------~~-------~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtG 203 (588)
T 2wdq_A 143 HALLHTLYQQNLKNH-TTIFSEWYALDLVK-----------NQ-------DGAVVGCTALCIETGEVVYFKARATVLATG 203 (588)
T ss_dssp HHHHHHHHHHHHHTT-CEEEETEEEEEEEE-----------CT-------TSCEEEEEEEETTTCCEEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHhCC-CEEEeCcEEEEEEE-----------CC-------CCEEEEEEEEEcCCCeEEEEEcCEEEECCC
Confidence 578889999998886 99999999999976 00 122233443 5675 689999999999
Q ss_pred CCChh
Q 013000 182 GKSRV 186 (451)
Q Consensus 182 ~~S~v 186 (451)
..|.+
T Consensus 204 g~~~~ 208 (588)
T 2wdq_A 204 GAGRI 208 (588)
T ss_dssp CCGGG
T ss_pred CCccc
Confidence 98874
No 111
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.07 E-value=0.002 Score=60.03 Aligned_cols=58 Identities=14% Similarity=0.013 Sum_probs=40.5
Q ss_pred hHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCC
Q 013000 106 NKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 183 (451)
Q Consensus 106 R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 183 (451)
-..|...+.+.+.+.+.+.+... +++.+.. ...+...|...||+++.+|.||-|.|.+
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------------------~~~~~~~v~~~~g~~~~a~~liiATGs~ 116 (304)
T 4fk1_A 59 PEEFKEIGLNEVMKYPSVHYYEK-TVVMITK-------------------QSTGLFEIVTKDHTKYLAERVLLATGMQ 116 (304)
T ss_dssp HHHHHHHHHHHHTTSTTEEEEEC-CEEEEEE-------------------CTTSCEEEEETTCCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHHHhcCCEEEEee-EEEEeee-------------------cCCCcEEEEECCCCEEEeCEEEEccCCc
Confidence 34666666677776665555544 5555543 1335578888999999999999999974
No 112
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=96.97 E-value=0.0013 Score=65.21 Aligned_cols=59 Identities=17% Similarity=0.146 Sum_probs=47.9
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCChh
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 186 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 186 (451)
..+.+.|.+.+++.| ++++.+++|++++. .++.+.+.+.||+++.+|.||.|.|.++..
T Consensus 208 ~~~~~~l~~~l~~~G-v~i~~~~~V~~i~~--------------------~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 208 LEVSRAAERVFKKQG-LTIRTGVRVTAVVP--------------------EAKGARVELEGGEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp HHHHHHHHHHHHHHT-CEEECSCCEEEEEE--------------------ETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHCC-CEEEECCEEEEEEE--------------------eCCEEEEEECCCeEEEcCEEEECcCCCcCC
Confidence 355666677777766 99999999999975 345688888889999999999999997764
No 113
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.95 E-value=0.004 Score=64.53 Aligned_cols=61 Identities=11% Similarity=0.101 Sum_probs=45.0
Q ss_pred hHHHHHHHHHHhhcC-CCc-eEEcCCeeEEEEeCCCCCCcccCCCCCccccccCC---CeeEEE---eCCCc--EEEeeE
Q 013000 106 NKVLHSSLLSCMQNT-EFQ-KTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKG---HLAKLD---LSDGT--SLYAKL 175 (451)
Q Consensus 106 R~~L~~~L~~~~~~~-g~v-~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~v~---~~dg~--~~~adl 175 (451)
-..+.+.|.+.+.+. + + +|+.++.|+++.. +++ ..+.|. ..+|+ .+.|+.
T Consensus 150 g~~~~~~l~~~~~~~~g-v~~i~~~~~v~~L~~-------------------~~~~~g~v~Gv~~~~~~~g~~~~i~A~~ 209 (643)
T 1jnr_A 150 GESYKPIIAEAAKMAVG-EENIYERVFIFELLK-------------------DNNDPNAVAGAVGFSVREPKFYVFKAKA 209 (643)
T ss_dssp ETTHHHHHHHHHHHHHC-GGGEECSEEEEEEEE-------------------CTTCTTBEEEEEEEESSSSCEEEEECSE
T ss_pred cHHHHHHHHHHHHhcCC-CcEEEecCEEEEEEE-------------------cCCccceeEEEEEEEecCCcEEEEEcCE
Confidence 345778888888776 5 9 9999999999976 112 233333 25665 689999
Q ss_pred EEeecCCCChh
Q 013000 176 VVGADGGKSRV 186 (451)
Q Consensus 176 vVgADG~~S~v 186 (451)
||.|+|..|.+
T Consensus 210 VVlAtGG~~~~ 220 (643)
T 1jnr_A 210 VILATGGATLL 220 (643)
T ss_dssp EEECCCCBCSS
T ss_pred EEECCCccccc
Confidence 99999999874
No 114
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=96.82 E-value=0.0023 Score=63.39 Aligned_cols=59 Identities=15% Similarity=0.152 Sum_probs=46.6
Q ss_pred HHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCChh
Q 013000 108 VLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 186 (451)
Q Consensus 108 ~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 186 (451)
.+.+.|.+.+++.| ++++++++|++++. +.++.+.|.+.||+++.+|.||.|.|.++.+
T Consensus 209 ~~~~~l~~~l~~~G-v~i~~~~~v~~i~~-------------------~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 209 MISETLVEVMNAEG-PQLHTNAIPKAVVK-------------------NTDGSLTLELEDGRSETVDCLIWAIGREPAN 267 (450)
T ss_dssp HHHHHHHHHHHHHS-CEEECSCCEEEEEE-------------------CTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHCC-CEEEeCCEEEEEEE-------------------eCCcEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 45566677777766 99999999999975 1223478888999999999999999987665
No 115
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=96.78 E-value=0.0028 Score=62.97 Aligned_cols=59 Identities=15% Similarity=0.126 Sum_probs=46.5
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeC-C--Cc--EEEeeEEEeecC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS-D--GT--SLYAKLVVGADG 181 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-d--g~--~~~adlvVgADG 181 (451)
..+.+.|.+.+++.| ++++++++|++++. .++.+.|.+. | |+ ++.+|+||.|.|
T Consensus 210 ~~~~~~l~~~l~~~g-V~i~~~~~v~~i~~--------------------~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G 268 (464)
T 2eq6_A 210 PETAALLRRALEKEG-IRVRTKTKAVGYEK--------------------KKDGLHVRLEPAEGGEGEEVVVDKVLVAVG 268 (464)
T ss_dssp HHHHHHHHHHHHHTT-CEEECSEEEEEEEE--------------------ETTEEEEEEEETTCCSCEEEEESEEEECSC
T ss_pred HHHHHHHHHHHHhcC-CEEEcCCEEEEEEE--------------------eCCEEEEEEeecCCCceeEEEcCEEEECCC
Confidence 355666777777776 99999999999975 3355777776 6 77 899999999999
Q ss_pred CCChh
Q 013000 182 GKSRV 186 (451)
Q Consensus 182 ~~S~v 186 (451)
..+.+
T Consensus 269 ~~p~~ 273 (464)
T 2eq6_A 269 RKPRT 273 (464)
T ss_dssp EEESC
T ss_pred cccCC
Confidence 87655
No 116
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=96.76 E-value=0.0015 Score=65.11 Aligned_cols=53 Identities=13% Similarity=0.106 Sum_probs=38.3
Q ss_pred HHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCC--cE------EEeeEEEee
Q 013000 108 VLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDG--TS------LYAKLVVGA 179 (451)
Q Consensus 108 ~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg--~~------~~adlvVgA 179 (451)
.|...+.+.+.+.+ ++++.++.+.. ++..+.|...+| ++ +.+|.||.|
T Consensus 97 ~l~~~~~~~~~~~g-v~~~~g~~~~~-----------------------~~~~v~V~~~~G~~~~~~~~~~i~~d~lViA 152 (478)
T 1v59_A 97 QLTGGIELLFKKNK-VTYYKGNGSFE-----------------------DETKIRVTPVDGLEGTVKEDHILDVKNIIVA 152 (478)
T ss_dssp HHHHHHHHHHHHTT-CEEEESEEEES-----------------------SSSEEEEECCTTCTTCCSSCEEEEEEEEEEC
T ss_pred HHHHHHHHHHHhCC-CEEEEEEEEEc-----------------------cCCeEEEEecCCCcccccccceEEeCEEEEC
Confidence 34444555666655 99999876641 235678887777 56 999999999
Q ss_pred cCCCC
Q 013000 180 DGGKS 184 (451)
Q Consensus 180 DG~~S 184 (451)
+|.++
T Consensus 153 tGs~p 157 (478)
T 1v59_A 153 TGSEV 157 (478)
T ss_dssp CCEEE
T ss_pred cCCCC
Confidence 99876
No 117
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.70 E-value=0.00096 Score=65.71 Aligned_cols=44 Identities=25% Similarity=0.281 Sum_probs=35.0
Q ss_pred CceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCChhh
Q 013000 122 FQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRVR 187 (451)
Q Consensus 122 ~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~vR 187 (451)
+++++.+++|+.+.. .+. .|.+.+|+++.+|.||.|+|.++.+.
T Consensus 74 gv~~~~~~~v~~i~~--------------------~~~--~v~~~~g~~~~~d~lviAtG~~p~~~ 117 (431)
T 1q1r_A 74 NIQLLGGTQVTAINR--------------------DRQ--QVILSDGRALDYDRLVLATGGRPRPL 117 (431)
T ss_dssp TEEEECSCCEEEEET--------------------TTT--EEEETTSCEEECSEEEECCCEEECCC
T ss_pred CCEEEeCCEEEEEEC--------------------CCC--EEEECCCCEEECCEEEEcCCCCccCC
Confidence 399999999999864 222 56668898999999999999866543
No 118
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.66 E-value=0.0011 Score=65.93 Aligned_cols=59 Identities=12% Similarity=0.085 Sum_probs=41.5
Q ss_pred HHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCC--cEEEeeEEEeecCCCChh
Q 013000 109 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDG--TSLYAKLVVGADGGKSRV 186 (451)
Q Consensus 109 L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg--~~~~adlvVgADG~~S~v 186 (451)
+...+.+.+.+.+ ++++.++.+. +. ...+.|...+| .++.+|.||.|+|.++.+
T Consensus 98 l~~~~~~~~~~~g-v~~~~g~~~~-~~----------------------~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~ 153 (470)
T 1dxl_A 98 LTRGIEGLFKKNK-VTYVKGYGKF-VS----------------------PSEISVDTIEGENTVVKGKHIIIATGSDVKS 153 (470)
T ss_dssp HHHHHHHHHHHHT-CEEEESCEEE-EE----------------------TTEEEECCSSSCCEEEECSEEEECCCEEECC
T ss_pred HHHHHHHHHHhCC-CEEEEeEEEE-ec----------------------CCEEEEEeCCCceEEEEcCEEEECCCCCCCC
Confidence 4444555555555 8999997654 42 25677877788 689999999999987765
Q ss_pred hhhhC
Q 013000 187 RELAG 191 (451)
Q Consensus 187 R~~l~ 191 (451)
-...+
T Consensus 154 p~~~g 158 (470)
T 1dxl_A 154 LPGVT 158 (470)
T ss_dssp BTTBC
T ss_pred CCCCC
Confidence 44333
No 119
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=96.60 E-value=0.0049 Score=61.88 Aligned_cols=54 Identities=13% Similarity=0.153 Sum_probs=42.4
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 183 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 183 (451)
..|.+.|.+.+.+.+ ++|+.+++|+.+.. ++. .+++.||+++.||.||-+--..
T Consensus 222 ~~l~~~l~~~l~~~g-~~i~~~~~V~~I~~--------------------~~~--~v~~~~G~~~~ad~vI~t~P~~ 275 (513)
T 4gde_A 222 GGIWIAVANTLPKEK-TRFGEKGKVTKVNA--------------------NNK--TVTLQDGTTIGYKKLVSTMAVD 275 (513)
T ss_dssp HHHHHHHHHTSCGGG-EEESGGGCEEEEET--------------------TTT--EEEETTSCEEEEEEEEECSCHH
T ss_pred HHHHHHHHHHHHhcC-eeeecceEEEEEEc--------------------cCC--EEEEcCCCEEECCEEEECCCHH
Confidence 557777888887776 89999999999975 223 4567899999999999775543
No 120
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=96.60 E-value=0.0051 Score=63.78 Aligned_cols=60 Identities=13% Similarity=0.076 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEe---CCCc--EEEeeEEEeecC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDL---SDGT--SLYAKLVVGADG 181 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~---~dg~--~~~adlvVgADG 181 (451)
..+...|.+.+.+.+ ++|+.++.|+++.. +++....|.. .+|+ .+.|+.||.|.|
T Consensus 158 ~~l~~~L~~~a~~~g-v~i~~~~~v~~L~~-------------------~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATG 217 (660)
T 2bs2_A 158 HTMLFAVANECLKLG-VSIQDRKEAIALIH-------------------QDGKCYGAVVRDLVTGDIIAYVAKGTLIATG 217 (660)
T ss_dssp HHHHHHHHHHHHHHT-CEEECSEEEEEEEE-------------------ETTEEEEEEEEETTTCCEEEEECSEEEECCC
T ss_pred HHHHHHHHHHHHhCC-CEEEECcEEEEEEe-------------------cCCEEEEEEEEECCCCcEEEEEcCEEEEccC
Confidence 368888999988876 99999999999975 1222223332 5676 589999999999
Q ss_pred CCChh
Q 013000 182 GKSRV 186 (451)
Q Consensus 182 ~~S~v 186 (451)
..+.+
T Consensus 218 G~~~~ 222 (660)
T 2bs2_A 218 GYGRI 222 (660)
T ss_dssp CCGGG
T ss_pred cchhh
Confidence 99875
No 121
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=96.50 E-value=0.006 Score=60.57 Aligned_cols=58 Identities=19% Similarity=0.123 Sum_probs=46.4
Q ss_pred HHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCc-EEEeeEEEeecCCCChh
Q 013000 108 VLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGT-SLYAKLVVGADGGKSRV 186 (451)
Q Consensus 108 ~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~-~~~adlvVgADG~~S~v 186 (451)
.+.+.|.+.+++.+ ++++.+++|++++. .++.+.|.+.||+ ++.+|.||.|.|..+.+
T Consensus 208 ~~~~~l~~~l~~~g-v~i~~~~~v~~i~~--------------------~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 208 LLSATLAENMHAQG-IETHLEFAVAALER--------------------DAQGTTLVAQDGTRLEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp HHHHHHHHHHHHTT-CEEESSCCEEEEEE--------------------ETTEEEEEETTCCEEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHCC-CEEEeCCEEEEEEE--------------------eCCeEEEEEeCCcEEEEcCEEEECCCCCcCC
Confidence 44456667777776 99999999999975 3345888899999 89999999999986654
No 122
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.46 E-value=0.006 Score=56.70 Aligned_cols=56 Identities=14% Similarity=0.097 Sum_probs=42.8
Q ss_pred echHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCC--CeeEEEeC-CCcEEEeeEEEeec
Q 013000 104 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKG--HLAKLDLS-DGTSLYAKLVVGAD 180 (451)
Q Consensus 104 i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~v~~~-dg~~~~adlvVgAD 180 (451)
+....+...|.+.+.+.+ ++++++ +|+++ . .+ ..+.+... ++ ++.+|.||-|.
T Consensus 59 ~~~~~~~~~~~~~~~~~~-v~~~~~-~v~~i-~--------------------~~~~~~~~v~~~~~~-~~~~d~lvlAt 114 (315)
T 3r9u_A 59 MDGISFMAPWSEQCMRFG-LKHEMV-GVEQI-L--------------------KNSDGSFTIKLEGGK-TELAKAVIVCT 114 (315)
T ss_dssp BCHHHHHHHHHHHHTTTC-CEEECC-CEEEE-E--------------------ECTTSCEEEEETTSC-EEEEEEEEECC
T ss_pred CCHHHHHHHHHHHHHHcC-cEEEEE-EEEEE-e--------------------cCCCCcEEEEEecCC-EEEeCEEEEee
Confidence 556788888989888886 899998 88888 5 22 45664232 34 89999999999
Q ss_pred CCC
Q 013000 181 GGK 183 (451)
Q Consensus 181 G~~ 183 (451)
|..
T Consensus 115 G~~ 117 (315)
T 3r9u_A 115 GSA 117 (315)
T ss_dssp CEE
T ss_pred CCC
Confidence 973
No 123
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=96.30 E-value=0.0025 Score=63.70 Aligned_cols=26 Identities=31% Similarity=0.346 Sum_probs=22.9
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPAL 30 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~ 30 (451)
|||+++|+.|++ .|++|+|||+++.+
T Consensus 16 ~aGl~aA~~l~~----~G~~V~liE~~~~~ 41 (482)
T 1ojt_A 16 PGGYSAAFAAAD----EGLKVAIVERYKTL 41 (482)
T ss_dssp HHHHHHHHHHHH----TTCCEEEEESSSCS
T ss_pred HHHHHHHHHHHh----CCCeEEEEeCCCCC
Confidence 589999999999 49999999997654
No 124
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.17 E-value=0.0025 Score=63.16 Aligned_cols=54 Identities=9% Similarity=0.100 Sum_probs=39.8
Q ss_pred HHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCC-cEEEeeEEEeecCCCChh
Q 013000 109 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDG-TSLYAKLVVGADGGKSRV 186 (451)
Q Consensus 109 L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg-~~~~adlvVgADG~~S~v 186 (451)
+.+.+.+.+.+.+ ++++.++.+. + +...+.|...+| .++.+|.||.|+|.++..
T Consensus 93 l~~~~~~~~~~~g-v~~~~g~~~~-i----------------------d~~~v~V~~~~G~~~i~~d~lViATGs~p~~ 147 (455)
T 1ebd_A 93 LTGGVEGLLKGNK-VEIVKGEAYF-V----------------------DANTVRVVNGDSAQTYTFKNAIIATGSRPIE 147 (455)
T ss_dssp HHHHHHHHHHTTT-CEEEESEEEE-E----------------------ETTEEEEEETTEEEEEECSEEEECCCEEECC
T ss_pred HHHHHHHHHHhCC-CEEEEEEEEE-c----------------------cCCeEEEEeCCCcEEEEeCEEEEecCCCCCC
Confidence 4555666666665 9999987554 4 235688888888 689999999999986544
No 125
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.15 E-value=0.05 Score=53.92 Aligned_cols=58 Identities=9% Similarity=-0.051 Sum_probs=45.9
Q ss_pred HHHHHHHHHHhhcC-------CCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEee
Q 013000 107 KVLHSSLLSCMQNT-------EFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGA 179 (451)
Q Consensus 107 ~~L~~~L~~~~~~~-------g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgA 179 (451)
..|.+.|.+.+.+. .+++|+.+++|++++. .++.+.|++.||+++.||.||.|
T Consensus 206 ~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~--------------------~~~~v~v~~~~g~~~~ad~vI~a 265 (472)
T 1b37_A 206 EAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKY--------------------SPGGVTVKTEDNSVYSADYVMVS 265 (472)
T ss_dssp THHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEE--------------------CSSCEEEEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHhccccccccccccccEEEcCCEEEEEEE--------------------cCCcEEEEECCCCEEEcCEEEEe
Confidence 36667777776543 1268999999999987 44668899999999999999999
Q ss_pred cCCCC
Q 013000 180 DGGKS 184 (451)
Q Consensus 180 DG~~S 184 (451)
.+...
T Consensus 266 ~~~~~ 270 (472)
T 1b37_A 266 ASLGV 270 (472)
T ss_dssp SCHHH
T ss_pred cCHHH
Confidence 99643
No 126
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=96.13 E-value=0.012 Score=58.49 Aligned_cols=49 Identities=8% Similarity=0.003 Sum_probs=37.4
Q ss_pred HHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcE--EEeeEEEeecCCC
Q 013000 111 SSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTS--LYAKLVVGADGGK 183 (451)
Q Consensus 111 ~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~--~~adlvVgADG~~ 183 (451)
..+.+.+.+.+ ++++.+ +++.+. ...+.|...+|++ +.+|.||-|.|..
T Consensus 93 ~~~~~~~~~~~-v~~~~g-~v~~id----------------------~~~~~V~~~~g~~~~~~~d~lviAtG~~ 143 (466)
T 3l8k_A 93 QHKRNMSQYET-LTFYKG-YVKIKD----------------------PTHVIVKTDEGKEIEAETRYMIIASGAE 143 (466)
T ss_dssp HHHHHHTTCTT-EEEESE-EEEEEE----------------------TTEEEEEETTSCEEEEEEEEEEECCCEE
T ss_pred chHHHHHHhCC-CEEEEe-EEEEec----------------------CCeEEEEcCCCcEEEEecCEEEECCCCC
Confidence 45555555555 899888 677663 3678888889988 9999999999963
No 127
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.12 E-value=0.0085 Score=62.08 Aligned_cols=64 Identities=17% Similarity=0.151 Sum_probs=46.7
Q ss_pred echHHHHHHHHHHhhcC-CCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCC---CeeEEEe---CCCc--EEEee
Q 013000 104 VENKVLHSSLLSCMQNT-EFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKG---HLAKLDL---SDGT--SLYAK 174 (451)
Q Consensus 104 i~R~~L~~~L~~~~~~~-g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~v~~---~dg~--~~~ad 174 (451)
+....+.+.|.+.+.+. ++++|+.++.|+++.. +.+ ..+.|.. .+|+ .+.|+
T Consensus 163 ~~G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~-------------------~~~~~g~v~Gv~~~~~~~g~~~~i~Ak 223 (662)
T 3gyx_A 163 INGESYKVIVAEAAKNALGQDRIIERIFIVKLLL-------------------DKNTPNRIAGAVGFNLRANEVHIFKAN 223 (662)
T ss_dssp EEETSHHHHHHHHHHHHHCTTTEECSEEECCCEE-------------------CSSSTTBEEEEEEEESSSSCEEEEECS
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEceEEEEEEE-------------------eCCccceEEEEEEEEcCCCcEEEEEeC
Confidence 44567888898888876 2499999999999876 111 3333432 4565 68999
Q ss_pred EEEeecCCCChh
Q 013000 175 LVVGADGGKSRV 186 (451)
Q Consensus 175 lvVgADG~~S~v 186 (451)
.||.|.|..+.+
T Consensus 224 ~VVLATGG~g~~ 235 (662)
T 3gyx_A 224 AMVVACGGAVNV 235 (662)
T ss_dssp EEEECCCCBCSS
T ss_pred EEEECCCccccc
Confidence 999999998864
No 128
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=96.11 E-value=0.012 Score=58.67 Aligned_cols=59 Identities=19% Similarity=0.211 Sum_probs=48.4
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCChh
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 186 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 186 (451)
..+.+.|.+.+++.| ++++.+++|++++. .++.+.|.+.||+++.+|.||.|.|..+..
T Consensus 232 ~~~~~~l~~~l~~~G-v~i~~~~~V~~i~~--------------------~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKG-ISIIYEATVSQVQS--------------------TENCYNVVLTNGQTICADRVMLATGRVPNT 290 (484)
T ss_dssp HHHHHHHHHHHHHHT-CEEESSCCEEEEEE--------------------CSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHCC-CEEEeCCEEEEEEe--------------------eCCEEEEEECCCcEEEcCEEEEeeCCCcCC
Confidence 456667777777776 99999999999976 445678999999999999999999986554
No 129
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=95.94 E-value=0.017 Score=56.79 Aligned_cols=44 Identities=11% Similarity=-0.133 Sum_probs=31.6
Q ss_pred ccCCEEEEcccccccCCc-------chhccccchHHHHHHHHHHHHhhhcC
Q 013000 328 VSKRVVLIGDAAHTVHPL-------AGQGVNLGFGDASTLSRIIAEGIAVG 371 (451)
Q Consensus 328 ~~g~v~LvGDAAh~~~P~-------~g~G~~~al~da~~La~~L~~~~~~~ 371 (451)
...+|+.+||+++..++. .-.-+..|...|..+|..|...+...
T Consensus 296 ~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~ 346 (437)
T 3sx6_A 296 KYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGR 346 (437)
T ss_dssp SCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTS
T ss_pred CCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCC
Confidence 347899999999876431 11234568889999999998877643
No 130
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=95.82 E-value=0.006 Score=60.35 Aligned_cols=42 Identities=10% Similarity=0.120 Sum_probs=32.5
Q ss_pred ceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeC-CCcEEEeeEEEeecCCCC
Q 013000 123 QKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS-DGTSLYAKLVVGADGGKS 184 (451)
Q Consensus 123 v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-dg~~~~adlvVgADG~~S 184 (451)
++++.+++|+++.. ....+.+... ++.++.+|.||-|.|.+.
T Consensus 73 i~~~~~~~V~~id~--------------------~~~~v~v~~~~~~~~~~~d~lviAtG~~p 115 (452)
T 3oc4_A 73 IQLLLNREVVAMDV--------------------ENQLIAWTRKEEQQWYSYDKLILATGASQ 115 (452)
T ss_dssp EEEECSCEEEEEET--------------------TTTEEEEEETTEEEEEECSEEEECCCCCB
T ss_pred CEEEECCEEEEEEC--------------------CCCEEEEEecCceEEEEcCEEEECCCccc
Confidence 89999999999965 3455666522 455899999999999844
No 131
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=95.78 E-value=0.016 Score=57.51 Aligned_cols=38 Identities=11% Similarity=0.155 Sum_probs=29.7
Q ss_pred cCCEEEEcccccccCCcchh-----ccccchHHHHHHHHHHHH
Q 013000 329 SKRVVLIGDAAHTVHPLAGQ-----GVNLGFGDASTLSRIIAE 366 (451)
Q Consensus 329 ~g~v~LvGDAAh~~~P~~g~-----G~~~al~da~~La~~L~~ 366 (451)
..+|+.+||++...++.+|. -...|...|..+|+.|..
T Consensus 286 ~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 328 (472)
T 3iwa_A 286 DPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLAD 328 (472)
T ss_dssp STTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTT
T ss_pred CCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcC
Confidence 46899999999887776664 345788899998888853
No 132
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=95.74 E-value=0.016 Score=56.87 Aligned_cols=44 Identities=11% Similarity=-0.065 Sum_probs=31.8
Q ss_pred ccCCEEEEcccccccCCc-------chhccccchHHHHHHHHHHHHhhhcC
Q 013000 328 VSKRVVLIGDAAHTVHPL-------AGQGVNLGFGDASTLSRIIAEGIAVG 371 (451)
Q Consensus 328 ~~g~v~LvGDAAh~~~P~-------~g~G~~~al~da~~La~~L~~~~~~~ 371 (451)
...+|+.+||+++...|. .-.-+..|+..|..+|..|...+...
T Consensus 285 ~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~ 335 (430)
T 3h28_A 285 TYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNN 335 (430)
T ss_dssp SSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCC
Confidence 347899999999876421 11234568889999999998887643
No 133
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=95.74 E-value=0.036 Score=53.92 Aligned_cols=67 Identities=16% Similarity=0.208 Sum_probs=51.4
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCCh-
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR- 185 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~- 185 (451)
..+.+.|.+.+.+.| |+++++++|++++. ++....|.+.||+++.+|+||-|-|....
T Consensus 185 ~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~--------------------~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~ 243 (410)
T 3ef6_A 185 RRIGAWLRGLLTELG-VQVELGTGVVGFSG--------------------EGQLEQVMASDGRSFVADSALICVGAEPAD 243 (410)
T ss_dssp HHHHHHHHHHHHHHT-CEEECSCCEEEEEC--------------------SSSCCEEEETTSCEEECSEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHCC-CEEEeCCEEEEEec--------------------cCcEEEEEECCCCEEEcCEEEEeeCCeecH
Confidence 456667777777776 99999999999965 33445788999999999999999999654
Q ss_pred -hhhhhCCCC
Q 013000 186 -VRELAGFKT 194 (451)
Q Consensus 186 -vR~~l~~~~ 194 (451)
+-+.+++..
T Consensus 244 ~l~~~~gl~~ 253 (410)
T 3ef6_A 244 QLARQAGLAC 253 (410)
T ss_dssp HHHHHTTCCB
T ss_pred HHHHhCCCcc
Confidence 445555543
No 134
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=95.65 E-value=0.053 Score=52.76 Aligned_cols=66 Identities=14% Similarity=0.080 Sum_probs=50.9
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCe-eEEEeCCCcEEEeeEEEeecCCCCh
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL-AKLDLSDGTSLYAKLVVGADGGKSR 185 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~v~~~dg~~~~adlvVgADG~~S~ 185 (451)
..+.+.|.+.+++.| ++++.+++|++++. .++. ..|.+.||+++.+|+||-|-|....
T Consensus 194 ~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~--------------------~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~ 252 (415)
T 3lxd_A 194 EALSEFYQAEHRAHG-VDLRTGAAMDCIEG--------------------DGTKVTGVRMQDGSVIPADIVIVGIGIVPC 252 (415)
T ss_dssp HHHHHHHHHHHHHTT-CEEEETCCEEEEEE--------------------SSSBEEEEEESSSCEEECSEEEECSCCEES
T ss_pred HHHHHHHHHHHHhCC-CEEEECCEEEEEEe--------------------cCCcEEEEEeCCCCEEEcCEEEECCCCccC
Confidence 566777777777776 99999999999975 2233 4788999999999999999998654
Q ss_pred --hhhhhCCC
Q 013000 186 --VRELAGFK 193 (451)
Q Consensus 186 --vR~~l~~~ 193 (451)
+-+.++..
T Consensus 253 ~~l~~~~gl~ 262 (415)
T 3lxd_A 253 VGALISAGAS 262 (415)
T ss_dssp CHHHHHTTCC
T ss_pred hHHHHhCCCC
Confidence 33444544
No 135
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=95.64 E-value=0.019 Score=53.27 Aligned_cols=59 Identities=15% Similarity=0.201 Sum_probs=42.0
Q ss_pred echHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCC
Q 013000 104 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 183 (451)
Q Consensus 104 i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 183 (451)
+...+|...+.+.+.+.+ +++... ++..... ......+...++.++.+|.||-|.|.+
T Consensus 63 i~~~~l~~~~~~~~~~~~-~~~~~~-~v~~~~~--------------------~~~~~~~~~~~~~~~~~~~liiATG~~ 120 (314)
T 4a5l_A 63 IDGNELMMNMRTQSEKYG-TTIITE-TIDHVDF--------------------STQPFKLFTEEGKEVLTKSVIIATGAT 120 (314)
T ss_dssp EEHHHHHHHHHHHHHHTT-CEEECC-CEEEEEC--------------------SSSSEEEEETTCCEEEEEEEEECCCEE
T ss_pred CCHHHHHHHHHHHHhhcC-cEEEEe-EEEEeec--------------------CCCceEEEECCCeEEEEeEEEEccccc
Confidence 445677777888887776 677655 5555543 334566667788899999999999974
Q ss_pred C
Q 013000 184 S 184 (451)
Q Consensus 184 S 184 (451)
.
T Consensus 121 ~ 121 (314)
T 4a5l_A 121 A 121 (314)
T ss_dssp E
T ss_pred c
Confidence 3
No 136
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=95.62 E-value=0.045 Score=53.84 Aligned_cols=58 Identities=21% Similarity=0.168 Sum_probs=43.7
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCChh
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 186 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 186 (451)
..+.+.|.+.+++.| ++++.+++|++++. .+....+.+ +|.++.+|.||.|.|.+...
T Consensus 191 ~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~--------------------~~~v~~v~~-~~~~i~~d~vi~a~G~~p~~ 248 (447)
T 1nhp_A 191 KEFTDVLTEEMEANN-ITIATGETVERYEG--------------------DGRVQKVVT-DKNAYDADLVVVAVGVRPNT 248 (447)
T ss_dssp HHHHHHHHHHHHTTT-EEEEESCCEEEEEC--------------------SSBCCEEEE-SSCEEECSEEEECSCEEESC
T ss_pred HHHHHHHHHHHHhCC-CEEEcCCEEEEEEc--------------------cCcEEEEEE-CCCEEECCEEEECcCCCCCh
Confidence 456777888888876 99999999999965 222224555 56789999999999986543
No 137
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=95.60 E-value=0.028 Score=56.01 Aligned_cols=38 Identities=13% Similarity=0.026 Sum_probs=29.7
Q ss_pred cCCEEEEcccccccCCcchh-----ccccchHHHHHHHHHHHH
Q 013000 329 SKRVVLIGDAAHTVHPLAGQ-----GVNLGFGDASTLSRIIAE 366 (451)
Q Consensus 329 ~g~v~LvGDAAh~~~P~~g~-----G~~~al~da~~La~~L~~ 366 (451)
..+|+.+||++....+..|. -...|..+|..+|..|..
T Consensus 310 ~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 352 (480)
T 3cgb_A 310 VQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLD 352 (480)
T ss_dssp STTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcC
Confidence 46899999999887765553 367789999999888854
No 138
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=95.48 E-value=0.041 Score=54.73 Aligned_cols=59 Identities=10% Similarity=0.102 Sum_probs=46.0
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCC--eeEEEeCCC-cEEEeeEEEeecCCC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGH--LAKLDLSDG-TSLYAKLVVGADGGK 183 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~v~~~dg-~~~~adlvVgADG~~ 183 (451)
..+.+.|.+.+++.| ++++.+++|++++. .++ .+.|.+.|| +++.+|.||-|.|..
T Consensus 226 ~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~--------------------~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~ 284 (479)
T 2hqm_A 226 ECIQNTITDHYVKEG-INVHKLSKIVKVEK--------------------NVETDKLKIHMNDSKSIDDVDELIWTIGRK 284 (479)
T ss_dssp HHHHHHHHHHHHHHT-CEEECSCCEEEEEE--------------------CC-CCCEEEEETTSCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCC-eEEEeCCEEEEEEE--------------------cCCCcEEEEEECCCcEEEEcCEEEECCCCC
Confidence 355666777777776 99999999999965 212 378888999 789999999999986
Q ss_pred Chh
Q 013000 184 SRV 186 (451)
Q Consensus 184 S~v 186 (451)
...
T Consensus 285 p~~ 287 (479)
T 2hqm_A 285 SHL 287 (479)
T ss_dssp ECC
T ss_pred Ccc
Confidence 554
No 139
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.48 E-value=0.024 Score=56.02 Aligned_cols=59 Identities=7% Similarity=0.090 Sum_probs=44.8
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeC---CCcEEEeeEEEeecCCC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS---DGTSLYAKLVVGADGGK 183 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg~~~~adlvVgADG~~ 183 (451)
..+.+.|.+.+++.| ++++.+++|++++. .++.+.+.+. +++++.+|.||.|.|..
T Consensus 211 ~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~--------------------~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~ 269 (455)
T 1ebd_A 211 KQMAAIIKKRLKKKG-VEVVTNALAKGAEE--------------------REDGVTVTYEANGETKTIDADYVLVTVGRR 269 (455)
T ss_dssp HHHHHHHHHHHHHTT-CEEEESEEEEEEEE--------------------ETTEEEEEEEETTEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCC-CEEEeCCEEEEEEE--------------------eCCeEEEEEEeCCceeEEEcCEEEECcCCC
Confidence 355666777777776 99999999999965 3345677765 45689999999999986
Q ss_pred Chh
Q 013000 184 SRV 186 (451)
Q Consensus 184 S~v 186 (451)
...
T Consensus 270 p~~ 272 (455)
T 1ebd_A 270 PNT 272 (455)
T ss_dssp ESC
T ss_pred ccc
Confidence 543
No 140
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=95.42 E-value=0.024 Score=56.31 Aligned_cols=55 Identities=11% Similarity=0.079 Sum_probs=37.5
Q ss_pred HHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCC-C-cEEEeeEEEeecCCCChh
Q 013000 109 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSD-G-TSLYAKLVVGADGGKSRV 186 (451)
Q Consensus 109 L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d-g-~~~~adlvVgADG~~S~v 186 (451)
+...+.+.+.+.+ ++++.++. +.+ +...+.|...+ | .++.+|.||.|+|.++.+
T Consensus 99 l~~~~~~~~~~~g-v~~~~g~~-~~~----------------------~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~ 154 (474)
T 1zmd_A 99 LTGGIAHLFKQNK-VVHVNGYG-KIT----------------------GKNQVTATKADGGTQVIDTKNILIATGSEVTP 154 (474)
T ss_dssp HHHHHHHHHHHTT-CEEEESEE-EEE----------------------ETTEEEEECTTSCEEEEEEEEEEECCCEEECC
T ss_pred HHHHHHHHHHhCC-CEEEEEEE-EEe----------------------cCCEEEEEecCCCcEEEEeCEEEECCCCCCCC
Confidence 3334455555555 89998854 333 23567888877 4 579999999999986654
Q ss_pred h
Q 013000 187 R 187 (451)
Q Consensus 187 R 187 (451)
.
T Consensus 155 p 155 (474)
T 1zmd_A 155 F 155 (474)
T ss_dssp C
T ss_pred C
Confidence 3
No 141
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=95.41 E-value=0.0071 Score=58.88 Aligned_cols=39 Identities=21% Similarity=0.189 Sum_probs=29.4
Q ss_pred cCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhc
Q 013000 329 SKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAV 370 (451)
Q Consensus 329 ~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~ 370 (451)
..+|+.+||+++.-.|- -+..|...|..+|..|...+..
T Consensus 299 ~~~vfa~GD~~~~~~~~---~~~~A~~q~~~aa~~i~~~l~~ 337 (409)
T 3h8l_A 299 YDNVYAVGDANSMTVPK---LGYLAVMTGRIAAQHLANRLGV 337 (409)
T ss_dssp CTTEEECGGGBTTCCSC---CHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEeehhccCCCCc---HHHHHHHHHHHHHHHHHHHhcC
Confidence 46899999999863332 2356888999999999887743
No 142
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=95.37 E-value=0.083 Score=51.14 Aligned_cols=68 Identities=25% Similarity=0.263 Sum_probs=51.2
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCCh-
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR- 185 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~- 185 (451)
..+.+.|.+.+++.| ++++.+++|++++. +++....|.+.||+++.+|+||-|-|....
T Consensus 184 ~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~-------------------~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~ 243 (404)
T 3fg2_P 184 PEISSYFHDRHSGAG-IRMHYGVRATEIAA-------------------EGDRVTGVVLSDGNTLPCDLVVVGVGVIPNV 243 (404)
T ss_dssp HHHHHHHHHHHHHTT-CEEECSCCEEEEEE-------------------ETTEEEEEEETTSCEEECSEEEECCCEEECC
T ss_pred HHHHHHHHHHHHhCC-cEEEECCEEEEEEe-------------------cCCcEEEEEeCCCCEEEcCEEEECcCCccCH
Confidence 456677777777776 99999999999975 122334688999999999999999998543
Q ss_pred -hhhhhCCCC
Q 013000 186 -VRELAGFKT 194 (451)
Q Consensus 186 -vR~~l~~~~ 194 (451)
+-+.++...
T Consensus 244 ~l~~~~gl~~ 253 (404)
T 3fg2_P 244 EIAAAAGLPT 253 (404)
T ss_dssp HHHHHTTCCB
T ss_pred HHHHhCCCCC
Confidence 445555543
No 143
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.32 E-value=0.0069 Score=58.55 Aligned_cols=39 Identities=21% Similarity=0.153 Sum_probs=32.9
Q ss_pred CceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCC
Q 013000 122 FQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGG 182 (451)
Q Consensus 122 ~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~ 182 (451)
+++++.+++|+++.. ..-.|++.||+++.+|.||-|.|.
T Consensus 76 ~i~~~~~~~V~~id~----------------------~~~~v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 76 NIKVITSEFATSIDP----------------------NNKLVTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp TCEEECSCCEEEEET----------------------TTTEEEETTSCEEECSEEEECCCE
T ss_pred CCEEEeCCEEEEEEC----------------------CCCEEEECCCCEEECCEEEEecCC
Confidence 399999999999965 223577789999999999999996
No 144
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=95.30 E-value=0.024 Score=56.42 Aligned_cols=59 Identities=8% Similarity=-0.024 Sum_probs=46.9
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCC----CcEEEeeEEEeecCC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSD----GTSLYAKLVVGADGG 182 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d----g~~~~adlvVgADG~ 182 (451)
..+.+.|.+.+++.| ++++.+++|++++. .++.+.|.+.| |+++.+|.||-|.|.
T Consensus 226 ~~~~~~l~~~l~~~g-V~i~~~~~v~~i~~--------------------~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~ 284 (482)
T 1ojt_A 226 RDLVKVWQKQNEYRF-DNIMVNTKTVAVEP--------------------KEDGVYVTFEGANAPKEPQRYDAVLVAAGR 284 (482)
T ss_dssp HHHHHHHHHHHGGGE-EEEECSCEEEEEEE--------------------ETTEEEEEEESSSCCSSCEEESCEEECCCE
T ss_pred HHHHHHHHHHHHhcC-CEEEECCEEEEEEE--------------------cCCeEEEEEeccCCCceEEEcCEEEECcCC
Confidence 356667777777776 99999999999975 33457777777 778899999999998
Q ss_pred CChh
Q 013000 183 KSRV 186 (451)
Q Consensus 183 ~S~v 186 (451)
....
T Consensus 285 ~p~~ 288 (482)
T 1ojt_A 285 APNG 288 (482)
T ss_dssp EECG
T ss_pred CcCC
Confidence 7654
No 145
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=95.27 E-value=0.0097 Score=58.07 Aligned_cols=40 Identities=18% Similarity=0.238 Sum_probs=33.3
Q ss_pred CceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCC
Q 013000 122 FQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 183 (451)
Q Consensus 122 ~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 183 (451)
+++++.+++|+.+.. ....|.+.+|+.+.+|.||-|.|..
T Consensus 79 ~i~~~~~~~v~~id~----------------------~~~~v~~~~g~~~~~d~lvlAtG~~ 118 (415)
T 3lxd_A 79 AVEMKLGAEVVSLDP----------------------AAHTVKLGDGSAIEYGKLIWATGGD 118 (415)
T ss_dssp TEEEEETCCEEEEET----------------------TTTEEEETTSCEEEEEEEEECCCEE
T ss_pred CcEEEeCCEEEEEEC----------------------CCCEEEECCCCEEEeeEEEEccCCc
Confidence 399999999999964 3346777899999999999999964
No 146
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=95.26 E-value=0.056 Score=53.52 Aligned_cols=59 Identities=12% Similarity=0.275 Sum_probs=43.9
Q ss_pred HHHHHHHHHHh-hcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeC--CC--cEEEeeEEEeecC
Q 013000 107 KVLHSSLLSCM-QNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS--DG--TSLYAKLVVGADG 181 (451)
Q Consensus 107 ~~L~~~L~~~~-~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--dg--~~~~adlvVgADG 181 (451)
..+.+.|.+.+ ++.| ++++.+++|++++. .++.+.+.+. || +++.+|.||-|.|
T Consensus 215 ~~~~~~l~~~l~~~~g-v~i~~~~~v~~i~~--------------------~~~~~~v~~~~~~g~~~~i~~D~vv~a~G 273 (468)
T 2qae_A 215 EDVTNALVGALAKNEK-MKFMTSTKVVGGTN--------------------NGDSVSLEVEGKNGKRETVTCEALLVSVG 273 (468)
T ss_dssp HHHHHHHHHHHHHHTC-CEEECSCEEEEEEE--------------------CSSSEEEEEECC---EEEEEESEEEECSC
T ss_pred HHHHHHHHHHHhhcCC-cEEEeCCEEEEEEE--------------------cCCeEEEEEEcCCCceEEEECCEEEECCC
Confidence 45666777777 7776 99999999999975 2344667765 77 5799999999999
Q ss_pred CCChh
Q 013000 182 GKSRV 186 (451)
Q Consensus 182 ~~S~v 186 (451)
..+..
T Consensus 274 ~~p~~ 278 (468)
T 2qae_A 274 RRPFT 278 (468)
T ss_dssp EEECC
T ss_pred cccCC
Confidence 86653
No 147
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=95.25 E-value=0.02 Score=56.74 Aligned_cols=53 Identities=15% Similarity=0.109 Sum_probs=36.8
Q ss_pred HHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCC--cEEEeeEEEeecCCCCh
Q 013000 109 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDG--TSLYAKLVVGADGGKSR 185 (451)
Q Consensus 109 L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg--~~~~adlvVgADG~~S~ 185 (451)
+...+.+.+.+.+ ++++.++.+ .+. ...+.|...+| .++.+|.||.|.|.+..
T Consensus 95 l~~~~~~~~~~~~-v~~~~g~~~-~i~----------------------~~~~~v~~~~G~~~~~~~d~lviAtG~~p~ 149 (468)
T 2qae_A 95 LTGGVEYLFKKNK-VTYYKGEGS-FET----------------------AHSIRVNGLDGKQEMLETKKTIIATGSEPT 149 (468)
T ss_dssp HHHHHHHHHHHHT-CEEEEEEEE-EEE----------------------TTEEEEEETTSCEEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHhCC-CEEEEEEEE-Eee----------------------CCEEEEEecCCceEEEEcCEEEECCCCCcC
Confidence 3334445555555 899988644 342 35688888888 68999999999997543
No 148
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=95.25 E-value=0.042 Score=55.34 Aligned_cols=67 Identities=15% Similarity=0.169 Sum_probs=50.7
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCe---eEEEeCCCc-EEEeeEEEeecCC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL---AKLDLSDGT-SLYAKLVVGADGG 182 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---v~v~~~dg~-~~~adlvVgADG~ 182 (451)
..+.+.|.+.+++.| ++++.+++|++++. +.++. +.|.+.||+ ++.+|.||-|.|.
T Consensus 255 ~~~~~~l~~~l~~~G-V~i~~~~~V~~i~~-------------------~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~ 314 (523)
T 1mo9_A 255 NETRAYVLDRMKEQG-MEIISGSNVTRIEE-------------------DANGRVQAVVAMTPNGEMRIETDFVFLGLGE 314 (523)
T ss_dssp HHHHHHHHHHHHHTT-CEEESSCEEEEEEE-------------------CTTSBEEEEEEEETTEEEEEECSCEEECCCC
T ss_pred HHHHHHHHHHHHhCC-cEEEECCEEEEEEE-------------------cCCCceEEEEEEECCCcEEEEcCEEEECcCC
Confidence 456677788887776 99999999999965 11222 678888997 8999999999999
Q ss_pred CChh---hhhhCCC
Q 013000 183 KSRV---RELAGFK 193 (451)
Q Consensus 183 ~S~v---R~~l~~~ 193 (451)
++.. -+.+++.
T Consensus 315 ~p~~~~~l~~~gl~ 328 (523)
T 1mo9_A 315 QPRSAELAKILGLD 328 (523)
T ss_dssp EECCHHHHHHHTCC
T ss_pred ccCCccCHHHcCCc
Confidence 7654 3444544
No 149
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=95.22 E-value=0.039 Score=54.82 Aligned_cols=61 Identities=8% Similarity=0.132 Sum_probs=44.8
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeC-----CCcEEEeeEEEeecC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS-----DGTSLYAKLVVGADG 181 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-----dg~~~~adlvVgADG 181 (451)
..+.+.|.+.+++.| ++++++++|++++. . +.+..+.|.+. +++++.+|.||.|.|
T Consensus 224 ~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~---------~---------~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G 284 (478)
T 1v59_A 224 GEVAKATQKFLKKQG-LDFKLSTKVISAKR---------N---------DDKNVVEIVVEDTKTNKQENLEAEVLLVAVG 284 (478)
T ss_dssp HHHHHHHHHHHHHTT-CEEECSEEEEEEEE---------E---------TTTTEEEEEEEETTTTEEEEEEESEEEECSC
T ss_pred HHHHHHHHHHHHHCC-CEEEeCCEEEEEEE---------e---------cCCCeEEEEEEEcCCCCceEEECCEEEECCC
Confidence 456677777777776 99999999999853 0 01244667665 346899999999999
Q ss_pred CCChh
Q 013000 182 GKSRV 186 (451)
Q Consensus 182 ~~S~v 186 (451)
.....
T Consensus 285 ~~p~~ 289 (478)
T 1v59_A 285 RRPYI 289 (478)
T ss_dssp EEECC
T ss_pred CCcCC
Confidence 86654
No 150
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=95.17 E-value=0.085 Score=52.61 Aligned_cols=60 Identities=12% Similarity=0.056 Sum_probs=47.9
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCChh
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 186 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 186 (451)
..+.+.|.+.+++.| ++|+++++|++++. +.++.+.|.+.||+++.+|.||-|.|.....
T Consensus 231 ~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~-------------------~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 231 SELRKQLTEQLRANG-INVRTHENPAKVTK-------------------NADGTRHVVFESGAEADYDVVMLAIGRVPRS 290 (490)
T ss_dssp HHHHHHHHHHHHHTT-EEEEETCCEEEEEE-------------------CTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHhCC-CEEEeCCEEEEEEE-------------------cCCCEEEEEECCCcEEEcCEEEEccCCCcCc
Confidence 356677777787776 99999999999975 1223478888999999999999999986553
No 151
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=95.11 E-value=0.034 Score=54.08 Aligned_cols=38 Identities=18% Similarity=0.347 Sum_probs=30.1
Q ss_pred cCCEEEEcccccccCCcchh-----ccccchHHHHHHHHHHHH
Q 013000 329 SKRVVLIGDAAHTVHPLAGQ-----GVNLGFGDASTLSRIIAE 366 (451)
Q Consensus 329 ~g~v~LvGDAAh~~~P~~g~-----G~~~al~da~~La~~L~~ 366 (451)
..+|+.+||++....|..|. -+..|..+|..+|..|..
T Consensus 265 ~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 307 (408)
T 2gqw_A 265 CPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVD 307 (408)
T ss_dssp STTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcC
Confidence 46899999999988776664 345788899998888864
No 152
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.09 E-value=0.036 Score=54.97 Aligned_cols=59 Identities=15% Similarity=0.226 Sum_probs=45.0
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeC---CC--cEEEeeEEEeecC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS---DG--TSLYAKLVVGADG 181 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg--~~~~adlvVgADG 181 (451)
..+.+.|.+.+++.| ++++++++|++++. +++.+.|.+. || +++.+|.||.|.|
T Consensus 218 ~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~--------------------~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G 276 (470)
T 1dxl_A 218 AEIRKQFQRSLEKQG-MKFKLKTKVVGVDT--------------------SGDGVKLTVEPSAGGEQTIIEADVVLVSAG 276 (470)
T ss_dssp HHHHHHHHHHHHHSS-CCEECSEEEEEEEC--------------------SSSSEEEEEEESSSCCCEEEEESEEECCCC
T ss_pred HHHHHHHHHHHHHcC-CEEEeCCEEEEEEE--------------------cCCeEEEEEEecCCCcceEEECCEEEECCC
Confidence 356677777777776 99999999999965 2334667665 55 5799999999999
Q ss_pred CCChh
Q 013000 182 GKSRV 186 (451)
Q Consensus 182 ~~S~v 186 (451)
.....
T Consensus 277 ~~p~~ 281 (470)
T 1dxl_A 277 RTPFT 281 (470)
T ss_dssp EEECC
T ss_pred CCcCC
Confidence 86543
No 153
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=95.08 E-value=0.068 Score=49.55 Aligned_cols=37 Identities=22% Similarity=0.172 Sum_probs=26.3
Q ss_pred cCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhh
Q 013000 329 SKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIA 369 (451)
Q Consensus 329 ~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~ 369 (451)
..+|+.+||++..-.. -+..|+.++..+|..+.+.++
T Consensus 270 ~pgIyA~GDv~~~~~~----~~~~A~~~G~~AA~~i~~~L~ 306 (312)
T 4gcm_A 270 VPGIFAAGDVRDKGLR----QIVTATGDGSIAAQSAAEYIE 306 (312)
T ss_dssp STTEEECSTTBSCSCC----SHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeecCCCcch----HHHHHHHHHHHHHHHHHHHHH
Confidence 3679999998853221 245688888888888877654
No 154
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=95.00 E-value=0.038 Score=54.12 Aligned_cols=39 Identities=18% Similarity=0.141 Sum_probs=31.6
Q ss_pred CceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCC
Q 013000 122 FQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 183 (451)
Q Consensus 122 ~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 183 (451)
+++++.+ +|+++.. ..-+|+++||+++.+|.||-|.|..
T Consensus 70 gv~~i~~-~v~~Id~----------------------~~~~V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 70 NIEFINE-KAESIDP----------------------DANTVTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp TEEEECS-CEEEEET----------------------TTTEEEETTCCEEECSEEEECCCCE
T ss_pred CcEEEEe-EEEEEEC----------------------CCCEEEECCCCEEECCEEEEeCCCC
Confidence 3898877 7998854 3345778899999999999999974
No 155
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=94.99 E-value=0.025 Score=55.76 Aligned_cols=38 Identities=26% Similarity=0.218 Sum_probs=29.3
Q ss_pred cCCEEEEcccccccCCcchh-----ccccchHHHHHHHHHHHH
Q 013000 329 SKRVVLIGDAAHTVHPLAGQ-----GVNLGFGDASTLSRIIAE 366 (451)
Q Consensus 329 ~g~v~LvGDAAh~~~P~~g~-----G~~~al~da~~La~~L~~ 366 (451)
..+|+.+||++...++.+|. -...|+.+|..+|..|..
T Consensus 272 ~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g 314 (449)
T 3kd9_A 272 VENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAG 314 (449)
T ss_dssp STTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcC
Confidence 46899999999888776664 346788888888887753
No 156
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.96 E-value=0.046 Score=52.31 Aligned_cols=39 Identities=8% Similarity=-0.066 Sum_probs=31.1
Q ss_pred CceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCC
Q 013000 122 FQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 183 (451)
Q Consensus 122 ~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 183 (451)
+++++.+++|+.+.. ....|. .+|+++.+|.||-|.|.+
T Consensus 74 ~v~~~~g~~v~~id~----------------------~~~~V~-~~g~~~~~d~lViATGs~ 112 (367)
T 1xhc_A 74 GIEIRLAEEAKLIDR----------------------GRKVVI-TEKGEVPYDTLVLATGAR 112 (367)
T ss_dssp TEEEECSCCEEEEET----------------------TTTEEE-ESSCEEECSEEEECCCEE
T ss_pred CcEEEECCEEEEEEC----------------------CCCEEE-ECCcEEECCEEEECCCCC
Confidence 399999999999854 224455 678899999999999964
No 157
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=94.86 E-value=0.041 Score=53.50 Aligned_cols=40 Identities=25% Similarity=0.376 Sum_probs=33.5
Q ss_pred CceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCC
Q 013000 122 FQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 183 (451)
Q Consensus 122 ~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 183 (451)
+++++.+++|+.+.. ..-.|.+.+|+++.+|.||-|.|..
T Consensus 71 ~i~~~~~~~v~~id~----------------------~~~~v~~~~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 71 RIDMLTGPEVTALDV----------------------QTRTISLDDGTTLSADAIVIATGSR 110 (410)
T ss_dssp TCEEEESCCEEEEET----------------------TTTEEEETTSCEEECSEEEECCCEE
T ss_pred CCEEEeCCEEEEEEC----------------------CCCEEEECCCCEEECCEEEEccCCc
Confidence 389999999999965 2346777899999999999999975
No 158
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=94.61 E-value=0.13 Score=51.04 Aligned_cols=59 Identities=8% Similarity=0.103 Sum_probs=44.5
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCe-eEEEe-----CCCcEEEeeEEEeec
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL-AKLDL-----SDGTSLYAKLVVGAD 180 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~v~~-----~dg~~~~adlvVgAD 180 (451)
..+.+.|.+.+++.| ++++.+++|++++. .++. +.+.+ .+++++.+|.||.|.
T Consensus 220 ~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~--------------------~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~ 278 (474)
T 1zmd_A 220 MEISKNFQRILQKQG-FKFKLNTKVTGATK--------------------KSDGKIDVSIEAASGGKAEVITCDVLLVCI 278 (474)
T ss_dssp HHHHHHHHHHHHHTT-CEEECSEEEEEEEE--------------------CTTSCEEEEEEETTSCCCEEEEESEEEECS
T ss_pred HHHHHHHHHHHHHCC-CEEEeCceEEEEEE--------------------cCCceEEEEEEecCCCCceEEEcCEEEECc
Confidence 456667777777776 99999999999975 2233 66664 456789999999999
Q ss_pred CCCChh
Q 013000 181 GGKSRV 186 (451)
Q Consensus 181 G~~S~v 186 (451)
|.....
T Consensus 279 G~~p~~ 284 (474)
T 1zmd_A 279 GRRPFT 284 (474)
T ss_dssp CEEECC
T ss_pred CCCcCC
Confidence 986543
No 159
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=94.48 E-value=0.24 Score=48.61 Aligned_cols=59 Identities=10% Similarity=0.082 Sum_probs=44.4
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCChh
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 186 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 186 (451)
..+.+.|.+.+++.| ++++.+++|++++. .++.+.....||+++.+|.||-|-|.....
T Consensus 191 ~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~--------------------~~~~v~~v~~~g~~i~~D~vv~a~G~~p~~ 249 (452)
T 2cdu_A 191 KEFTDILAKDYEAHG-VNLVLGSKVAAFEE--------------------VDDEIITKTLDGKEIKSDIAILCIGFRPNT 249 (452)
T ss_dssp HHHHHHHHHHHHHTT-CEEEESSCEEEEEE--------------------ETTEEEEEETTSCEEEESEEEECCCEEECC
T ss_pred hhHHHHHHHHHHHCC-CEEEcCCeeEEEEc--------------------CCCeEEEEEeCCCEEECCEEEECcCCCCCH
Confidence 356667777777776 99999999999964 234454233488899999999999986543
No 160
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=94.34 E-value=0.017 Score=56.17 Aligned_cols=38 Identities=18% Similarity=0.168 Sum_probs=28.8
Q ss_pred cCCEEEEcccccccCCcchhc-----cccchHHHHHHHHHHHH
Q 013000 329 SKRVVLIGDAAHTVHPLAGQG-----VNLGFGDASTLSRIIAE 366 (451)
Q Consensus 329 ~g~v~LvGDAAh~~~P~~g~G-----~~~al~da~~La~~L~~ 366 (451)
..+|+.+||++....|..|.- ...|...|..+|..|..
T Consensus 267 ~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 309 (404)
T 3fg2_P 267 DPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLTG 309 (404)
T ss_dssp STTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTT
T ss_pred CCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhCC
Confidence 468999999999988877653 45677777777777643
No 161
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=94.34 E-value=0.034 Score=54.86 Aligned_cols=38 Identities=11% Similarity=0.083 Sum_probs=29.5
Q ss_pred cCCEEEEcccccccCCcchh-----ccccchHHHHHHHHHHHH
Q 013000 329 SKRVVLIGDAAHTVHPLAGQ-----GVNLGFGDASTLSRIIAE 366 (451)
Q Consensus 329 ~g~v~LvGDAAh~~~P~~g~-----G~~~al~da~~La~~L~~ 366 (451)
..+|+.+||++...++..|. -...|+.+|..+|..|..
T Consensus 274 ~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 316 (452)
T 2cdu_A 274 NRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTE 316 (452)
T ss_dssp STTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSS
T ss_pred CCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCC
Confidence 46899999999987766553 467788888888888753
No 162
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=94.31 E-value=0.066 Score=53.39 Aligned_cols=38 Identities=13% Similarity=0.003 Sum_probs=29.3
Q ss_pred cCCEEEEcccccccCCcch-----hccccchHHHHHHHHHHHH
Q 013000 329 SKRVVLIGDAAHTVHPLAG-----QGVNLGFGDASTLSRIIAE 366 (451)
Q Consensus 329 ~g~v~LvGDAAh~~~P~~g-----~G~~~al~da~~La~~L~~ 366 (451)
..+|+.+||++...++.+| +-...|..+|..+|..|..
T Consensus 318 ~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 360 (490)
T 2bc0_A 318 IPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACG 360 (490)
T ss_dssp STTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcC
Confidence 4689999999987766555 3456788899988888854
No 163
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=94.31 E-value=0.066 Score=52.77 Aligned_cols=26 Identities=23% Similarity=0.335 Sum_probs=23.1
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPAL 30 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~ 30 (451)
|||+++|..|++. |++|+|||+.+.+
T Consensus 11 ~aGl~aA~~l~~~----g~~V~lie~~~~~ 36 (455)
T 2yqu_A 11 PGGYVAAIRAAQL----GMKVGVVEKEKAL 36 (455)
T ss_dssp HHHHHHHHHHHHT----TCCEEEEESSSSS
T ss_pred hhHHHHHHHHHHC----CCeEEEEeCCCCC
Confidence 6899999999994 9999999998654
No 164
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=94.30 E-value=0.18 Score=50.29 Aligned_cols=56 Identities=16% Similarity=0.071 Sum_probs=43.1
Q ss_pred HHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeC--CC--cEEEeeEEEeecCCC
Q 013000 108 VLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS--DG--TSLYAKLVVGADGGK 183 (451)
Q Consensus 108 ~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--dg--~~~~adlvVgADG~~ 183 (451)
.+.+.+.+.+.+. ++++.+++|++++. .++.+.+.+. || .++.+|.||-|-|..
T Consensus 216 ~~~~~l~~~l~~~--V~i~~~~~v~~i~~--------------------~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~ 273 (492)
T 3ic9_A 216 EMKRYAEKTFNEE--FYFDAKARVISTIE--------------------KEDAVEVIYFDKSGQKTTESFQYVLAATGRK 273 (492)
T ss_dssp HHHHHHHHHHHTT--SEEETTCEEEEEEE--------------------CSSSEEEEEECTTCCEEEEEESEEEECSCCE
T ss_pred HHHHHHHHHHhhC--cEEEECCEEEEEEE--------------------cCCEEEEEEEeCCCceEEEECCEEEEeeCCc
Confidence 5666666666653 89999999999976 3456777775 77 589999999999985
Q ss_pred Ch
Q 013000 184 SR 185 (451)
Q Consensus 184 S~ 185 (451)
..
T Consensus 274 p~ 275 (492)
T 3ic9_A 274 AN 275 (492)
T ss_dssp ES
T ss_pred cC
Confidence 43
No 165
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.23 E-value=0.086 Score=50.36 Aligned_cols=60 Identities=17% Similarity=0.142 Sum_probs=44.3
Q ss_pred HHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCCh--
Q 013000 108 VLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR-- 185 (451)
Q Consensus 108 ~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~-- 185 (451)
.+.+.+.+.+++.| ++++.+++|++++. . .|.+.||+ +.+|+||.|.|....
T Consensus 184 ~~~~~l~~~l~~~g-V~i~~~~~v~~i~~----------------------~--~v~~~~g~-i~~D~vi~a~G~~p~~~ 237 (367)
T 1xhc_A 184 ELSNMIKDMLEETG-VKFFLNSELLEANE----------------------E--GVLTNSGF-IEGKVKICAIGIVPNVD 237 (367)
T ss_dssp HHHHHHHHHHHHTT-EEEECSCCEEEECS----------------------S--EEEETTEE-EECSCEEEECCEEECCH
T ss_pred HHHHHHHHHHHHCC-CEEEcCCEEEEEEe----------------------e--EEEECCCE-EEcCEEEECcCCCcCHH
Confidence 45566677777776 99999999999842 2 36678888 999999999998554
Q ss_pred hhhhhCCC
Q 013000 186 VRELAGFK 193 (451)
Q Consensus 186 vR~~l~~~ 193 (451)
+-+.++..
T Consensus 238 ll~~~gl~ 245 (367)
T 1xhc_A 238 LARRSGIH 245 (367)
T ss_dssp HHHHTTCC
T ss_pred HHHhCCCC
Confidence 33444544
No 166
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.18 E-value=0.071 Score=52.64 Aligned_cols=56 Identities=14% Similarity=0.073 Sum_probs=41.6
Q ss_pred HHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCC--cEEEeeEEEeecCCCCh
Q 013000 108 VLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDG--TSLYAKLVVGADGGKSR 185 (451)
Q Consensus 108 ~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg--~~~~adlvVgADG~~S~ 185 (451)
.+.+.|.+.+.+.+ ++++.+++|++++. +.+.+...+| +++.+|.||.|.|....
T Consensus 213 ~~~~~l~~~l~~~g-v~i~~~~~v~~i~~----------------------~~v~v~~~~G~~~~i~~D~vv~a~G~~p~ 269 (458)
T 1lvl_A 213 ELTAPVAESLKKLG-IALHLGHSVEGYEN----------------------GCLLANDGKGGQLRLEADRVLVAVGRRPR 269 (458)
T ss_dssp HHHHHHHHHHHHHT-CEEETTCEEEEEET----------------------TEEEEECSSSCCCEECCSCEEECCCEEEC
T ss_pred HHHHHHHHHHHHCC-CEEEECCEEEEEEe----------------------CCEEEEECCCceEEEECCEEEECcCCCcC
Confidence 45556666666666 99999999999842 2366664467 58999999999998654
Q ss_pred h
Q 013000 186 V 186 (451)
Q Consensus 186 v 186 (451)
.
T Consensus 270 ~ 270 (458)
T 1lvl_A 270 T 270 (458)
T ss_dssp C
T ss_pred C
Confidence 3
No 167
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=94.14 E-value=0.016 Score=57.16 Aligned_cols=38 Identities=16% Similarity=0.041 Sum_probs=28.0
Q ss_pred cCCEEEEcccccccCCcchh-----ccccchHHHHHHHHHHHH
Q 013000 329 SKRVVLIGDAAHTVHPLAGQ-----GVNLGFGDASTLSRIIAE 366 (451)
Q Consensus 329 ~g~v~LvGDAAh~~~P~~g~-----G~~~al~da~~La~~L~~ 366 (451)
..+|+.+||++....+..|. -...|+.+|..++..|..
T Consensus 273 ~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 315 (447)
T 1nhp_A 273 EPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEE 315 (447)
T ss_dssp STTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSSS
T ss_pred CCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhcC
Confidence 46899999999876655543 356788888888877753
No 168
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=94.14 E-value=0.097 Score=50.50 Aligned_cols=40 Identities=15% Similarity=0.171 Sum_probs=29.8
Q ss_pred cCCEEEEccccccc-CCcchhccccchHHHHHHHHHHHHhhhcC
Q 013000 329 SKRVVLIGDAAHTV-HPLAGQGVNLGFGDASTLSRIIAEGIAVG 371 (451)
Q Consensus 329 ~g~v~LvGDAAh~~-~P~~g~G~~~al~da~~La~~L~~~~~~~ 371 (451)
..+|+.+||+|... .|-+ +..|...|..+|+.|...++..
T Consensus 286 ~p~VfAiGDva~~~~~pk~---a~~A~~qa~v~A~ni~~~l~G~ 326 (401)
T 3vrd_B 286 QPGIHVIGDACNAAPMPKS---AYSANSQAKVAAAAVVALLKGE 326 (401)
T ss_dssp STTEEECGGGBCCTTSCBS---HHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCEEEecccccCCCCCch---HHHHHHHHHHHHHHHHHHhcCC
Confidence 46899999998643 2333 3467889999999998877653
No 169
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=94.12 E-value=0.015 Score=59.49 Aligned_cols=38 Identities=18% Similarity=0.117 Sum_probs=28.8
Q ss_pred cCCEEEEcccccccCCcchh-----ccccchHHHHHHHHHHHH
Q 013000 329 SKRVVLIGDAAHTVHPLAGQ-----GVNLGFGDASTLSRIIAE 366 (451)
Q Consensus 329 ~g~v~LvGDAAh~~~P~~g~-----G~~~al~da~~La~~L~~ 366 (451)
..+|+.+||++...++.+|. -+..|...|..+|+.|..
T Consensus 310 ~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 352 (588)
T 3ics_A 310 DPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHG 352 (588)
T ss_dssp STTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcC
Confidence 46899999999877766554 345678888888887754
No 170
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=94.05 E-value=0.3 Score=45.15 Aligned_cols=59 Identities=19% Similarity=0.117 Sum_probs=41.9
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCC----C--cEEEeeEEEeec
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSD----G--TSLYAKLVVGAD 180 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d----g--~~~~adlvVgAD 180 (451)
..+.+.|.+.+.+.+ ++++++++|++++. +.+....|.+.+ | .++.+|.||-|-
T Consensus 184 ~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~-------------------~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~ 243 (320)
T 1trb_A 184 KILIKRLMDKVENGN-IILHTNRTLEEVTG-------------------DQMGVTGVRLRDTQNSDNIESLDVAGLFVAI 243 (320)
T ss_dssp HHHHHHHHHHHHTSS-EEEECSCEEEEEEE-------------------CSSSEEEEEEECCTTCCCCEEEECSEEEECS
T ss_pred HHHHHHHHHhcccCC-eEEEcCceeEEEEc-------------------CCCceEEEEEEeccCCCceEEEEcCEEEEEe
Confidence 455666777777776 99999999999975 111223355544 5 479999999999
Q ss_pred CCCCh
Q 013000 181 GGKSR 185 (451)
Q Consensus 181 G~~S~ 185 (451)
|....
T Consensus 244 G~~p~ 248 (320)
T 1trb_A 244 GHSPN 248 (320)
T ss_dssp CEEES
T ss_pred CCCCC
Confidence 97543
No 171
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=94.01 E-value=0.13 Score=51.26 Aligned_cols=58 Identities=22% Similarity=0.242 Sum_probs=45.1
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCC---C--cEEEeeEEEeecC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSD---G--TSLYAKLVVGADG 181 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d---g--~~~~adlvVgADG 181 (451)
..+.+.+.+.+.+.+ ++++.+++|++++. .++.+.+.+.+ | +++.+|.||-|.|
T Consensus 239 ~~~~~~l~~~l~~~g-V~v~~~~~v~~i~~--------------------~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G 297 (491)
T 3urh_A 239 GEVAKQLQRMLTKQG-IDFKLGAKVTGAVK--------------------SGDGAKVTFEPVKGGEATTLDAEVVLIATG 297 (491)
T ss_dssp HHHHHHHHHHHHHTT-CEEECSEEEEEEEE--------------------ETTEEEEEEEETTSCCCEEEEESEEEECCC
T ss_pred HHHHHHHHHHHHhCC-CEEEECCeEEEEEE--------------------eCCEEEEEEEecCCCceEEEEcCEEEEeeC
Confidence 456677777777776 99999999999976 44566777753 5 4799999999999
Q ss_pred CCCh
Q 013000 182 GKSR 185 (451)
Q Consensus 182 ~~S~ 185 (451)
....
T Consensus 298 ~~p~ 301 (491)
T 3urh_A 298 RKPS 301 (491)
T ss_dssp CEEC
T ss_pred CccC
Confidence 8544
No 172
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=93.93 E-value=0.097 Score=50.15 Aligned_cols=106 Identities=8% Similarity=0.071 Sum_probs=59.9
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCCCCCCCCCCC-----CCCCceeeec-HHH--HHHHHHCCCchhhhhhhcc
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALGKSNFIKKED-----PPDPRVSTVT-PAT--ISFFKEIGAWQYVQQHRHA 72 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~~~~~~~~~~-----~~~~~g~~l~-~~~--~~~L~~lgl~~~~~~~~~~ 72 (451)
+||+.+|+.|++ +|++|+|+|+++.+.......... .+..+|.... ..+ .+-++.+|- .+... .
T Consensus 11 ~AG~~AA~~la~----~G~~V~liE~~~~~~tp~h~~d~i~eL~CnpSigG~~~~~akGlL~~EIdaLGg--~m~~~-a- 82 (443)
T 3g5s_A 11 LAGSEAAWTLLR----LGVPVRLFEMRPKRMTPAHGTDRFAEIVCSNSLGGEGETNAKGLLQAEMRRAGS--LVMEA-A- 82 (443)
T ss_dssp HHHHHHHHHHHH----TTCCEEEECCTTTSCCSSCCSSCTTCCCSCCEEEECSTTCHHHHHHHHHHHHTC--HHHHH-H-
T ss_pred HHHHHHHHHHHH----CCCcEEEEeccCCcCCccccCCCccccccCcCCCccccccchhHHHHHHHHcCC--hHhhh-h-
Confidence 489999999999 599999999998654332100000 0111222111 111 122233321 11110 0
Q ss_pred cccEEEEEeCCCcceeEeecCCCCCccceeeechHHHHHHHHHHhhcCCCceEEcCCeeEEE
Q 013000 73 YFDKMQVWDYTGLGYTKYNARDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSM 134 (451)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~ 134 (451)
....+ + ......++|..+.+.+.+.+.+.++++++.+ +|+++
T Consensus 83 D~~~i-------------p------Ag~al~vDR~~f~~~~~~~le~~pni~l~q~-eV~~l 124 (443)
T 3g5s_A 83 DLARV-------------P------AGGALAVDREEFSGYITERLTGHPLLEVVRE-EVREI 124 (443)
T ss_dssp HHSEE-------------C------CTTEEEECHHHHHHHHHHHHHTCTTEEEECS-CCCSC
T ss_pred hhcCC-------------C------CCccccCCcHHHHHHHHHHHHcCCCeEEEhh-hhhhh
Confidence 00111 1 1223679999999999999999999998854 66665
No 173
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=93.89 E-value=0.16 Score=50.36 Aligned_cols=59 Identities=14% Similarity=0.158 Sum_probs=45.8
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCC---cEEEeeEEEeecCCC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDG---TSLYAKLVVGADGGK 183 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg---~~~~adlvVgADG~~ 183 (451)
..+.+.+.+.+++.| ++++.+++|++++. .++.+.+.+.++ +++.+|.||-|-|..
T Consensus 221 ~~~~~~l~~~l~~~G-v~v~~~~~v~~i~~--------------------~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 221 EQVAKEAQKILTKQG-LKILLGARVTGTEV--------------------KNKQVTVKFVDAEGEKSQAFDKLIVAVGRR 279 (476)
T ss_dssp HHHHHHHHHHHHHTT-EEEEETCEEEEEEE--------------------CSSCEEEEEESSSEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCC-CEEEECCEEEEEEE--------------------cCCEEEEEEEeCCCcEEEECCEEEEeeCCc
Confidence 456667777777776 99999999999976 345677777765 579999999999975
Q ss_pred Chh
Q 013000 184 SRV 186 (451)
Q Consensus 184 S~v 186 (451)
...
T Consensus 280 p~~ 282 (476)
T 3lad_A 280 PVT 282 (476)
T ss_dssp ECC
T ss_pred ccC
Confidence 443
No 174
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=93.82 E-value=0.21 Score=50.57 Aligned_cols=85 Identities=14% Similarity=0.115 Sum_probs=52.4
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCCh-
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR- 185 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~- 185 (451)
..+.+.+.+.+++.| ++++++++|++++..+............. .....++.+.+.+.||+++.+|.||-|-|....
T Consensus 192 ~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 269 (565)
T 3ntd_A 192 REMAGFAHQAIRDQG-VDLRLGTALSEVSYQVQTHVASDAAGEDT-AHQHIKGHLSLTLSNGELLETDLLIMAIGVRPET 269 (565)
T ss_dssp HHHHHHHHHHHHHTT-CEEEETCCEEEEEEECCCCCCCGGGTCCC-TTCCTTCEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHCC-CEEEeCCeEEEEecccccccccccccccc-ccccCCCcEEEEEcCCCEEEcCEEEECcCCccch
Confidence 456667777777776 99999999999865211111100000000 000024567888899999999999999998544
Q ss_pred -hhhhhCCC
Q 013000 186 -VRELAGFK 193 (451)
Q Consensus 186 -vR~~l~~~ 193 (451)
+-+.++..
T Consensus 270 ~l~~~~g~~ 278 (565)
T 3ntd_A 270 QLARDAGLA 278 (565)
T ss_dssp HHHHHHTCC
T ss_pred HHHHhCCcc
Confidence 33444544
No 175
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=93.69 E-value=0.094 Score=52.30 Aligned_cols=35 Identities=9% Similarity=0.173 Sum_probs=27.8
Q ss_pred ccCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhh
Q 013000 328 VSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGI 368 (451)
Q Consensus 328 ~~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~ 368 (451)
...+|+.+||++.. ..+..|+.++..+|..|...+
T Consensus 342 s~~~vya~GD~~~~------~~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 342 IKDGIYVAGSAVSI------KPHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp EETTEEECSTTTCC------CCHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEeccCCc------cCHHHHHHHHHHHHHHHHHHc
Confidence 34689999999974 246678999999999987765
No 176
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=93.62 E-value=0.21 Score=49.35 Aligned_cols=58 Identities=10% Similarity=0.086 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCChh
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 186 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 186 (451)
..+.+.|.+.+++.| ++++.+++|++++. .+..+.|.+. +.++.+|.||-|.|.++..
T Consensus 216 ~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~--------------------~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 216 PAIGEAVTAAFRAEG-IEVLEHTQASQVAH--------------------MDGEFVLTTT-HGELRADKLLVATGRTPNT 273 (467)
T ss_dssp HHHHHHHHHHHHHTT-CEEETTCCEEEEEE--------------------ETTEEEEEET-TEEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHhCC-CEEEcCCEEEEEEE--------------------eCCEEEEEEC-CcEEEcCEEEECCCCCcCC
Confidence 456777888887776 99999999999965 3345667765 4579999999999987654
No 177
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=93.55 E-value=0.16 Score=50.34 Aligned_cols=57 Identities=11% Similarity=0.105 Sum_probs=42.2
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCCh
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 185 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 185 (451)
..+.+.|.+.+++.| ++++++++|++++. ++....+.+ ++.++.+|.||-|.|....
T Consensus 227 ~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~--------------------~~~v~~v~~-~~~~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 227 GDMAEYIYKEADKHH-IEILTNENVKAFKG--------------------NERVEAVET-DKGTYKADLVLVSVGVKPN 283 (480)
T ss_dssp HHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------SSBEEEEEE-TTEEEECSEEEECSCEEES
T ss_pred HHHHHHHHHHHHHcC-cEEEcCCEEEEEEc--------------------CCcEEEEEE-CCCEEEcCEEEECcCCCcC
Confidence 456667777777776 99999999999965 222223544 4558999999999998654
No 178
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=93.38 E-value=0.41 Score=47.58 Aligned_cols=57 Identities=16% Similarity=0.191 Sum_probs=42.9
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCCh
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 185 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 185 (451)
..+.+.+.+.+++.| ++++.+++|++++. ++....|.+ ||+++.+|.||-|-|....
T Consensus 236 ~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~--------------------~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 236 RDLTDLMAKNMEEHG-IQLAFGETVKEVAG--------------------NGKVEKIIT-DKNEYDVDMVILAVGFRPN 292 (490)
T ss_dssp HHHHHHHHHHHHTTT-CEEEETCCEEEEEC--------------------SSSCCEEEE-SSCEEECSEEEECCCEEEC
T ss_pred HHHHHHHHHHHHhCC-eEEEeCCEEEEEEc--------------------CCcEEEEEE-CCcEEECCEEEECCCCCcC
Confidence 456677788888876 99999999999853 122223444 7888999999999998544
No 179
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=93.35 E-value=0.11 Score=51.91 Aligned_cols=59 Identities=17% Similarity=0.140 Sum_probs=38.0
Q ss_pred HHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCc--EEEeeEEEeecCCCCh
Q 013000 109 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGT--SLYAKLVVGADGGKSR 185 (451)
Q Consensus 109 L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~--~~~adlvVgADG~~S~ 185 (451)
+...+.+.+.+.+ ++++.++ ++.+.. ..+. .+..+.|...+|+ .+.+|.||.|.|....
T Consensus 97 ~~~~~~~~~~~~g-v~~~~g~-~~~i~~---------~~~~-------~~~~~~V~~~~g~~~~~~~d~lviATGs~p~ 157 (499)
T 1xdi_A 97 QSADITAQLLSMG-VQVIAGR-GELIDS---------TPGL-------ARHRIKATAADGSTSEHEADVVLVATGASPR 157 (499)
T ss_dssp HHHHHHHHHHHTT-CEEEESE-EEECCS---------SSCC-------SSEEEEEECTTSCEEEEEESEEEECCCEEEC
T ss_pred HHHHHHHHHHhCC-CEEEEeE-EEEecC---------cccC-------CCCEEEEEeCCCcEEEEEeCEEEEcCCCCCC
Confidence 4444555565665 8999885 655421 0000 1256778778887 7999999999997543
No 180
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=93.22 E-value=0.4 Score=46.37 Aligned_cols=62 Identities=19% Similarity=0.161 Sum_probs=47.2
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCCh-
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR- 185 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~- 185 (451)
..+.+.+.+.+++.| ++++.+++|++++. + .|.+.||+++.+|.||-|-|....
T Consensus 187 ~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~----------------------~--~v~~~~g~~i~~D~vi~a~G~~p~~ 241 (408)
T 2gqw_A 187 ATLADFVARYHAAQG-VDLRFERSVTGSVD----------------------G--VVLLDDGTRIAADMVVVGIGVLAND 241 (408)
T ss_dssp HHHHHHHHHHHHHTT-CEEEESCCEEEEET----------------------T--EEEETTSCEEECSEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHcC-cEEEeCCEEEEEEC----------------------C--EEEECCCCEEEcCEEEECcCCCccH
Confidence 356667777777776 99999999999842 2 677789999999999999998543
Q ss_pred -hhhhhCCC
Q 013000 186 -VRELAGFK 193 (451)
Q Consensus 186 -vR~~l~~~ 193 (451)
+-+.++..
T Consensus 242 ~l~~~~gl~ 250 (408)
T 2gqw_A 242 ALARAAGLA 250 (408)
T ss_dssp HHHHHHTCC
T ss_pred HHHHhCCCC
Confidence 44455554
No 181
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=93.14 E-value=0.086 Score=53.51 Aligned_cols=38 Identities=13% Similarity=0.142 Sum_probs=29.3
Q ss_pred cCCEEEEcccccccCCcchhc-----cccchHHHHHHHHHHHH
Q 013000 329 SKRVVLIGDAAHTVHPLAGQG-----VNLGFGDASTLSRIIAE 366 (451)
Q Consensus 329 ~g~v~LvGDAAh~~~P~~g~G-----~~~al~da~~La~~L~~ 366 (451)
..+|+.+||++...++.+|.- +..|..+|..+|+.|..
T Consensus 295 ~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 337 (565)
T 3ntd_A 295 DPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFG 337 (565)
T ss_dssp STTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcC
Confidence 468999999998777766643 45688888888888753
No 182
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=93.05 E-value=0.073 Score=53.10 Aligned_cols=41 Identities=15% Similarity=0.226 Sum_probs=33.5
Q ss_pred CceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCC
Q 013000 122 FQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKS 184 (451)
Q Consensus 122 ~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S 184 (451)
+++++.+++|+++.. ..-+|.+.||+++.+|.||-|.|.+.
T Consensus 104 gv~~~~g~~v~~id~----------------------~~~~V~~~~g~~i~yd~lviATGs~p 144 (493)
T 1m6i_A 104 GVAVLTGKKVVQLDV----------------------RDNMVKLNDGSQITYEKCLIATGGTP 144 (493)
T ss_dssp EEEEEETCCEEEEEG----------------------GGTEEEETTSCEEEEEEEEECCCEEE
T ss_pred CeEEEcCCEEEEEEC----------------------CCCEEEECCCCEEECCEEEECCCCCC
Confidence 489999999999865 22356678999999999999999754
No 183
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=93.03 E-value=0.095 Score=49.06 Aligned_cols=41 Identities=12% Similarity=0.066 Sum_probs=33.1
Q ss_pred cCCEEEEcccccccCCcchhcccc--chHHHHHHHHHHHHhhh
Q 013000 329 SKRVVLIGDAAHTVHPLAGQGVNL--GFGDASTLSRIIAEGIA 369 (451)
Q Consensus 329 ~g~v~LvGDAAh~~~P~~g~G~~~--al~da~~La~~L~~~~~ 369 (451)
-.+|+..||||..+++....|... +|.++..+|+.|.+.+.
T Consensus 283 vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 283 VDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp SBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 368999999999999888877443 57789999999988764
No 184
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=93.00 E-value=0.13 Score=51.10 Aligned_cols=52 Identities=17% Similarity=0.200 Sum_probs=35.7
Q ss_pred HHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCc--EEEeeEEEeecCCCC
Q 013000 109 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGT--SLYAKLVVGADGGKS 184 (451)
Q Consensus 109 L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~--~~~adlvVgADG~~S 184 (451)
+...+.+.+.+.+ ++++.++ ++.+ +...+.|...+|+ ++.+|.||-|.|.+.
T Consensus 107 ~~~~~~~~~~~~g-v~~~~g~-~~~i----------------------~~~~~~v~~~~g~~~~~~~d~lviAtGs~p 160 (479)
T 2hqm_A 107 LNGIYQKNLEKEK-VDVVFGW-ARFN----------------------KDGNVEVQKRDNTTEVYSANHILVATGGKA 160 (479)
T ss_dssp HHHHHHHHHHHTT-EEEEEEE-EEEC----------------------TTSCEEEEESSSCCEEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHhCC-CEEEEeE-EEEe----------------------eCCEEEEEeCCCcEEEEEeCEEEEcCCCCC
Confidence 3344445555555 8988874 5554 2245777777887 899999999999643
No 185
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=92.73 E-value=0.17 Score=50.45 Aligned_cols=58 Identities=12% Similarity=0.102 Sum_probs=48.2
Q ss_pred HHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCChh
Q 013000 108 VLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 186 (451)
Q Consensus 108 ~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 186 (451)
.+.+.|.+.+++.| ++|+.+++|++++. .++.+.|.+.||+++.+|.||-|-|..+..
T Consensus 224 ~~~~~l~~~l~~~G-V~i~~~~~V~~i~~--------------------~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 224 DAALVLEESFAERG-VRLFKNARAASVTR--------------------TGAGVLVTMTDGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp HHHHHHHHHHHHTT-CEEETTCCEEEEEE--------------------CSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred HHHHHHHHHHHHCC-CEEEeCCEEEEEEE--------------------eCCEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 56778888888887 99999999999975 334578888899999999999999987653
No 186
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=92.65 E-value=0.15 Score=50.71 Aligned_cols=26 Identities=19% Similarity=0.227 Sum_probs=23.2
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPAL 30 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~ 30 (451)
|||+++|+.|++ .|++|+||||.+.+
T Consensus 35 ~aGl~aA~~la~----~G~~V~liEk~~~~ 60 (491)
T 3urh_A 35 PGGYVCAIKAAQ----LGMKVAVVEKRSTY 60 (491)
T ss_dssp HHHHHHHHHHHH----TTCCEEEEESSSSS
T ss_pred HHHHHHHHHHHH----CCCeEEEEecCCCC
Confidence 589999999999 49999999998655
No 187
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=92.61 E-value=0.27 Score=48.90 Aligned_cols=66 Identities=15% Similarity=0.215 Sum_probs=52.0
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCCh-
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR- 185 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~- 185 (451)
..+.+.+.+.+++.| |+++.+++|++++. .++.+.|.+.||+++.+|+||-|-|....
T Consensus 226 ~~~~~~~~~~l~~~G-V~v~~~~~V~~i~~--------------------~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~ 284 (493)
T 1m6i_A 226 EYLSNWTMEKVRREG-VKVMPNAIVQSVGV--------------------SSGKLLIKLKDGRKVETDHIVAAVGLEPNV 284 (493)
T ss_dssp HHHHHHHHHHHHTTT-CEEECSCCEEEEEE--------------------ETTEEEEEETTSCEEEESEEEECCCEEECC
T ss_pred HHHHHHHHHHHHhcC-CEEEeCCEEEEEEe--------------------cCCeEEEEECCCCEEECCEEEECCCCCccH
Confidence 457777888888886 99999999999965 34567888999999999999999998543
Q ss_pred -hhhhhCCC
Q 013000 186 -VRELAGFK 193 (451)
Q Consensus 186 -vR~~l~~~ 193 (451)
+-+.+++.
T Consensus 285 ~l~~~~gl~ 293 (493)
T 1m6i_A 285 ELAKTGGLE 293 (493)
T ss_dssp TTHHHHTCC
T ss_pred HHHHHcCCc
Confidence 44455554
No 188
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=92.60 E-value=0.24 Score=49.15 Aligned_cols=23 Identities=22% Similarity=0.073 Sum_probs=21.1
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSN 27 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~ 27 (451)
|+||++|+.|++ +|++|+||||.
T Consensus 36 ~aGl~aA~~la~----~G~~V~liEk~ 58 (484)
T 3o0h_A 36 SGGVRAARLAGA----LGKRVAIAEEY 58 (484)
T ss_dssp HHHHHHHHHHHH----TTCCEEEEESS
T ss_pred HHHHHHHHHHHh----CcCEEEEEeCC
Confidence 589999999999 49999999994
No 189
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=92.59 E-value=0.23 Score=49.13 Aligned_cols=67 Identities=18% Similarity=0.170 Sum_probs=52.0
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCC--
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKS-- 184 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S-- 184 (451)
..+.+.|.+.+++.| ++++.+++|++++. .++.+.|.+.||+++.+|.||-|-|...
T Consensus 202 ~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~--------------------~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 260 (472)
T 3iwa_A 202 KSLSQMLRHDLEKND-VVVHTGEKVVRLEG--------------------ENGKVARVITDKRTLDADLVILAAGVSPNT 260 (472)
T ss_dssp HHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------SSSBEEEEEESSCEEECSEEEECSCEEECC
T ss_pred HHHHHHHHHHHHhcC-CEEEeCCEEEEEEc--------------------cCCeEEEEEeCCCEEEcCEEEECCCCCcCH
Confidence 455677777777776 99999999999965 3466778889999999999999999954
Q ss_pred hhhhhhCCCC
Q 013000 185 RVRELAGFKT 194 (451)
Q Consensus 185 ~vR~~l~~~~ 194 (451)
.+-+.+++..
T Consensus 261 ~l~~~~gl~~ 270 (472)
T 3iwa_A 261 QLARDAGLEL 270 (472)
T ss_dssp HHHHHHTCCB
T ss_pred HHHHhCCccC
Confidence 3445555543
No 190
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=92.49 E-value=0.11 Score=51.29 Aligned_cols=24 Identities=21% Similarity=0.184 Sum_probs=21.7
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNP 28 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~ 28 (451)
|+|+++|+.|++. |++|+|||+..
T Consensus 14 ~aGl~aA~~l~~~----g~~V~lie~~~ 37 (467)
T 1zk7_A 14 GAAMAAALKAVEQ----GAQVTLIERGT 37 (467)
T ss_dssp HHHHHHHHHHHHT----TCEEEEEESSS
T ss_pred HHHHHHHHHHHHC----CCEEEEEeCCC
Confidence 5899999999994 99999999983
No 191
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=91.98 E-value=0.41 Score=48.77 Aligned_cols=64 Identities=14% Similarity=0.277 Sum_probs=47.8
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCCh-
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR- 185 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~- 185 (451)
..+.+.|.+.+++.| ++++.+++|++++. .+. .|.+.||+++.+|.||-|-|....
T Consensus 228 ~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~--------------------~~~--~v~~~~g~~i~~D~Vi~a~G~~p~~ 284 (588)
T 3ics_A 228 YEMAAYVHEHMKNHD-VELVFEDGVDALEE--------------------NGA--VVRLKSGSVIQTDMLILAIGVQPES 284 (588)
T ss_dssp HHHHHHHHHHHHHTT-CEEECSCCEEEEEG--------------------GGT--EEEETTSCEEECSEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHcC-CEEEECCeEEEEec--------------------CCC--EEEECCCCEEEcCEEEEccCCCCCh
Confidence 456677777777776 99999999999965 222 467789999999999999998543
Q ss_pred -hhhhhCCC
Q 013000 186 -VRELAGFK 193 (451)
Q Consensus 186 -vR~~l~~~ 193 (451)
+-+.++..
T Consensus 285 ~~l~~~g~~ 293 (588)
T 3ics_A 285 SLAKGAGLA 293 (588)
T ss_dssp HHHHHTTCC
T ss_pred HHHHhcCce
Confidence 33444444
No 192
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=91.68 E-value=0.074 Score=52.59 Aligned_cols=24 Identities=21% Similarity=0.209 Sum_probs=22.0
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNP 28 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~ 28 (451)
|||+++|..|++. |++|+|||+.+
T Consensus 16 ~aG~~aA~~l~~~----g~~V~lie~~~ 39 (464)
T 2eq6_A 16 PGGYHAAIRAAQL----GLKVLAVEAGE 39 (464)
T ss_dssp HHHHHHHHHHHHT----TCCEEEEESSC
T ss_pred HHHHHHHHHHHHC----CCeEEEEeCCC
Confidence 5899999999994 99999999987
No 193
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=91.62 E-value=0.4 Score=47.69 Aligned_cols=60 Identities=12% Similarity=0.179 Sum_probs=47.9
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCChh
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 186 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 186 (451)
..+.+.|.+.+++.| ++++++++|++++. +.++.+.|.+.||+++.+|.||-|.|.....
T Consensus 235 ~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~-------------------~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 235 ETIREEVTKQLTANG-IEIMTNENPAKVSL-------------------NTDGSKHVTFESGKTLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp HHHHHHHHHHHHHTT-CEEEESCCEEEEEE-------------------CTTSCEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHhCC-CEEEeCCEEEEEEE-------------------cCCceEEEEECCCcEEEcCEEEECCCCcccc
Confidence 356677778888876 99999999999975 1223478888999999999999999986554
No 194
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=91.57 E-value=0.29 Score=48.22 Aligned_cols=23 Identities=22% Similarity=0.111 Sum_probs=21.0
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSN 27 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~ 27 (451)
|+|+++|+.|++. |++|+||||.
T Consensus 15 ~aGl~aA~~la~~----G~~V~liEk~ 37 (463)
T 4dna_A 15 SGGVRSGRLAAAL----GKKVAIAEEF 37 (463)
T ss_dssp HHHHHHHHHHHTT----TCCEEEEESS
T ss_pred HHHHHHHHHHHhC----CCEEEEEeCC
Confidence 5899999999994 9999999993
No 195
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=91.44 E-value=0.51 Score=43.78 Aligned_cols=37 Identities=8% Similarity=0.004 Sum_probs=28.8
Q ss_pred CCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhc
Q 013000 330 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAV 370 (451)
Q Consensus 330 g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~ 370 (451)
.+|+.+||+++... ..+..|+.+|..+|..+...+..
T Consensus 300 ~~vya~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~l~~ 336 (338)
T 3itj_A 300 PGFFAAGDVQDSKY----RQAITSAGSGCMAALDAEKYLTS 336 (338)
T ss_dssp TTEEECGGGGCSSC----CCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEeeccCCCCc----cceeeehhhhHHHHHHHHHHHhc
Confidence 58999999998322 34567899999999999887653
No 196
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=91.33 E-value=0.049 Score=54.05 Aligned_cols=26 Identities=23% Similarity=0.199 Sum_probs=23.2
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPAL 30 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~ 30 (451)
|||+++|+.|++. |++|+|||+.+.+
T Consensus 13 ~aGl~aA~~la~~----G~~V~liEk~~~~ 38 (476)
T 3lad_A 13 PGGYVAAIKSAQL----GLKTALIEKYKGK 38 (476)
T ss_dssp HHHHHHHHHHHHH----TCCEEEEECCBCT
T ss_pred HHHHHHHHHHHhC----CCEEEEEeCCCcc
Confidence 5899999999994 9999999999754
No 197
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=91.25 E-value=0.35 Score=47.71 Aligned_cols=24 Identities=33% Similarity=0.311 Sum_probs=21.7
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNP 28 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~ 28 (451)
|||+++|..|++ .|++|+|||+..
T Consensus 14 ~aGl~aA~~l~~----~g~~V~liE~~~ 37 (463)
T 2r9z_A 14 SGGLAVAEKAAA----FGKRVALIESKA 37 (463)
T ss_dssp HHHHHHHHHHHH----TTCCEEEEESSC
T ss_pred HHHHHHHHHHHh----CCCcEEEEcCCC
Confidence 589999999999 499999999984
No 198
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=91.24 E-value=0.4 Score=47.34 Aligned_cols=58 Identities=9% Similarity=0.098 Sum_probs=46.3
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 183 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 183 (451)
..|.+.|.+.+.+.| ++|+.+++|+++.. + +++..+.|...+|+++.||.||.|.|..
T Consensus 256 ~~L~~aL~r~~~~~G-g~i~l~t~V~~I~~-----------d-------~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAING-GTFMLNKNVVDFVF-----------D-------DDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC---CEESSCCEEEEEE-----------C-------TTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcC-CEEEeCCeEEEEEE-----------e-------cCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 577888888888887 89999999999975 0 1234567888999999999999999987
No 199
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=91.22 E-value=0.51 Score=46.99 Aligned_cols=60 Identities=13% Similarity=0.101 Sum_probs=48.8
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcE-EEeeEEEeecCCCCh
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTS-LYAKLVVGADGGKSR 185 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~-~~adlvVgADG~~S~ 185 (451)
..+.+.|.+.+++.| ++++.+++|++++. +.++.+.|.+.||++ +.+|.||-|-|....
T Consensus 217 ~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~-------------------~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~ 276 (500)
T 1onf_A 217 ESVINVLENDMKKNN-INIVTFADVVEIKK-------------------VSDKNLSIHLSDGRIYEHFDHVIYCVGRSPD 276 (500)
T ss_dssp HHHHHHHHHHHHHTT-CEEECSCCEEEEEE-------------------SSTTCEEEEETTSCEEEEESEEEECCCBCCT
T ss_pred hhhHHHHHHHHHhCC-CEEEECCEEEEEEE-------------------cCCceEEEEECCCcEEEECCEEEECCCCCcC
Confidence 567778888888886 99999999999965 122347888899987 999999999998766
Q ss_pred h
Q 013000 186 V 186 (451)
Q Consensus 186 v 186 (451)
.
T Consensus 277 ~ 277 (500)
T 1onf_A 277 T 277 (500)
T ss_dssp T
T ss_pred C
Confidence 4
No 200
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=90.99 E-value=0.3 Score=49.00 Aligned_cols=26 Identities=27% Similarity=0.190 Sum_probs=23.1
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPAL 30 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~ 30 (451)
|+|+++|..|++. |++|+|||+.+.+
T Consensus 53 ~aGl~aA~~l~~~----G~~V~liE~~~~~ 78 (523)
T 1mo9_A 53 AAGRFGSAYLRAM----GGRQLIVDRWPFL 78 (523)
T ss_dssp HHHHHHHHHHHHT----TCCEEEEESSSSS
T ss_pred HHHHHHHHHHHHC----CCCEEEEeCCCCC
Confidence 5899999999994 9999999999744
No 201
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=90.78 E-value=0.58 Score=45.86 Aligned_cols=57 Identities=7% Similarity=0.014 Sum_probs=46.3
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCCh
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 185 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 185 (451)
..+.+.|.+.+++.| ++++.+++|++++. .++.+.|.+.+| ++.+|.||-|-|....
T Consensus 189 ~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~--------------------~~~~v~v~~~~g-~i~aD~Vv~A~G~~p~ 245 (452)
T 3oc4_A 189 KEMVAEVQKSLEKQA-VIFHFEETVLGIEE--------------------TANGIVLETSEQ-EISCDSGIFALNLHPQ 245 (452)
T ss_dssp HHHHHHHHHHHHTTT-EEEEETCCEEEEEE--------------------CSSCEEEEESSC-EEEESEEEECSCCBCC
T ss_pred HHHHHHHHHHHHHcC-CEEEeCCEEEEEEc--------------------cCCeEEEEECCC-EEEeCEEEECcCCCCC
Confidence 466677888888876 99999999999975 335567888777 8999999999998644
No 202
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=90.77 E-value=3.9 Score=42.20 Aligned_cols=37 Identities=16% Similarity=0.143 Sum_probs=28.7
Q ss_pred CCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhh
Q 013000 330 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIA 369 (451)
Q Consensus 330 g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~ 369 (451)
|||++.|++.+...+ .-+.-|+++|...|..|...+.
T Consensus 623 grl~FAGe~ts~~~~---g~v~GAi~SG~raA~~i~~~~~ 659 (662)
T 2z3y_A 623 PRLFFAGEHTIRNYP---ATVHGALLSGLREAGRIADQFL 659 (662)
T ss_dssp CCEEECSGGGCTTST---TSHHHHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEeccccCCCC---cCHHHHHHHHHHHHHHHHHHcc
Confidence 799999999886544 3466688888888888876553
No 203
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=90.59 E-value=0.98 Score=41.39 Aligned_cols=36 Identities=17% Similarity=0.172 Sum_probs=27.1
Q ss_pred CCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhh
Q 013000 330 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIA 369 (451)
Q Consensus 330 g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~ 369 (451)
.+|+.+||++... | .-+..|+.+|..+|..|...+.
T Consensus 274 ~~vya~GD~~~~~-~---~~~~~A~~~g~~aa~~i~~~l~ 309 (311)
T 2q0l_A 274 QGLFAAGDIRIFA-P---KQVVCAASDGATAALSVISYLE 309 (311)
T ss_dssp TTEEECSTTBTTC-C---CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEcccccCcc-h---HHHHHHHHhHHHHHHHHHHHHh
Confidence 5799999999852 2 2356788888888888877654
No 204
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=90.51 E-value=0.38 Score=48.17 Aligned_cols=24 Identities=25% Similarity=0.167 Sum_probs=21.9
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNP 28 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~ 28 (451)
|||+++|+.|++. |++|+|||+.+
T Consensus 42 paGl~aA~~la~~----G~~V~liEk~~ 65 (519)
T 3qfa_A 42 SGGLAAAKEAAQY----GKKVMVLDFVT 65 (519)
T ss_dssp HHHHHHHHHHHHT----TCCEEEECCCC
T ss_pred HHHHHHHHHHHhC----CCeEEEEeccC
Confidence 6899999999994 99999999975
No 205
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=90.21 E-value=0.085 Score=52.56 Aligned_cols=38 Identities=24% Similarity=0.469 Sum_probs=26.6
Q ss_pred CCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhcCC
Q 013000 330 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGA 372 (451)
Q Consensus 330 g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~ 372 (451)
.++.|+||..|+ |.|+..++.++...|+.|.+.+..++
T Consensus 458 ~gLyl~G~~t~p-----G~Gv~ga~~SG~~aA~~il~dL~gG~ 495 (501)
T 4dgk_A 458 TNLYLVGAGTHP-----GAGIPGVIGSAKATAGLMLEDLIGGS 495 (501)
T ss_dssp TTEEECCCH-----------HHHHHHHHHHHHHHHHHHHC---
T ss_pred CCEEEECCCCCC-----cccHHHHHHHHHHHHHHHHHHhcCCC
Confidence 589999998763 68999999999999999988776653
No 206
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=90.04 E-value=0.97 Score=44.60 Aligned_cols=59 Identities=8% Similarity=-0.030 Sum_probs=43.7
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCC-eeEEEeCC---C----cEEEeeEEEe
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGH-LAKLDLSD---G----TSLYAKLVVG 178 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~v~~~d---g----~~~~adlvVg 178 (451)
..+.+.+.+.+.+.| ++++.+++|++++. +.++ .+.|.+.| | .++.+|.||-
T Consensus 228 ~~~~~~~~~~l~~~g-v~i~~~~~v~~i~~-------------------~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~ 287 (478)
T 3dk9_A 228 SMISTNCTEELENAG-VEVLKFSQVKEVKK-------------------TLSGLEVSMVTAVPGRLPVMTMIPDVDCLLW 287 (478)
T ss_dssp HHHHHHHHHHHHHTT-CEEETTEEEEEEEE-------------------CSSSEEEEEEECCTTSCCEEEEEEEESEEEE
T ss_pred HHHHHHHHHHHHHCC-CEEEeCCEEEEEEE-------------------cCCCcEEEEEEccCCCCcccceEEEcCEEEE
Confidence 355666777777776 99999999999975 1123 47777775 2 5789999999
Q ss_pred ecCCCCh
Q 013000 179 ADGGKSR 185 (451)
Q Consensus 179 ADG~~S~ 185 (451)
|-|....
T Consensus 288 a~G~~p~ 294 (478)
T 3dk9_A 288 AIGRVPN 294 (478)
T ss_dssp CSCEEES
T ss_pred eeccccC
Confidence 9997543
No 207
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=90.00 E-value=0.85 Score=42.94 Aligned_cols=56 Identities=18% Similarity=0.137 Sum_probs=39.4
Q ss_pred HHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCee-EEEe--CCC--cEEEeeEEEeecCCC
Q 013000 109 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLA-KLDL--SDG--TSLYAKLVVGADGGK 183 (451)
Q Consensus 109 L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~v~~--~dg--~~~~adlvVgADG~~ 183 (451)
+.+.|.+...+.+ ++++++++|++++. .++.+ .|.+ .+| .++.+|.||-|.|..
T Consensus 204 ~~~~l~~~~~~~g-v~i~~~~~v~~i~~--------------------~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~ 262 (360)
T 3ab1_A 204 TAHEVERARANGT-IDVYLETEVASIEE--------------------SNGVLTRVHLRSSDGSKWTVEADRLLILIGFK 262 (360)
T ss_dssp HHHSSHHHHHHTS-EEEESSEEEEEEEE--------------------ETTEEEEEEEEETTCCEEEEECSEEEECCCBC
T ss_pred HHHHHHHHhhcCc-eEEEcCcCHHHhcc--------------------CCCceEEEEEEecCCCeEEEeCCEEEECCCCC
Confidence 4445555555555 99999999999965 22322 4444 478 479999999999976
Q ss_pred Ch
Q 013000 184 SR 185 (451)
Q Consensus 184 S~ 185 (451)
..
T Consensus 263 p~ 264 (360)
T 3ab1_A 263 SN 264 (360)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 208
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=89.49 E-value=1.1 Score=43.94 Aligned_cols=24 Identities=21% Similarity=0.141 Sum_probs=21.7
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNP 28 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~ 28 (451)
|||+++|..|++ .|++|+|||+..
T Consensus 14 ~aGl~aA~~l~~----~g~~V~liE~~~ 37 (450)
T 1ges_A 14 SGGIASINRAAM----YGQKCALIEAKE 37 (450)
T ss_dssp HHHHHHHHHHHT----TTCCEEEEESSC
T ss_pred HHHHHHHHHHHh----CCCeEEEEcCCC
Confidence 589999999999 499999999974
No 209
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=89.38 E-value=0.11 Score=51.67 Aligned_cols=24 Identities=25% Similarity=0.288 Sum_probs=21.6
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNP 28 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~ 28 (451)
|||+++|+.|++. |++|+|||+..
T Consensus 30 ~aGl~aA~~la~~----G~~V~liE~~~ 53 (478)
T 3dk9_A 30 SGGLASARRAAEL----GARAAVVESHK 53 (478)
T ss_dssp HHHHHHHHHHHHT----TCCEEEEESSC
T ss_pred HHHHHHHHHHHhC----CCeEEEEecCC
Confidence 5899999999994 99999999774
No 210
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=89.30 E-value=0.44 Score=47.32 Aligned_cols=24 Identities=29% Similarity=0.202 Sum_probs=21.4
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNP 28 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~ 28 (451)
|||+++|+.|++. |++|+||||.+
T Consensus 16 ~aGl~aA~~la~~----G~~V~liEk~~ 39 (488)
T 3dgz_A 16 SGGLACAKEAAQL----GKKVAVADYVE 39 (488)
T ss_dssp HHHHHHHHHHHHT----TCCEEEECCCC
T ss_pred HHHHHHHHHHHhC----CCeEEEEEecc
Confidence 6899999999994 99999999854
No 211
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=89.25 E-value=2 Score=39.58 Aligned_cols=38 Identities=11% Similarity=0.170 Sum_probs=28.8
Q ss_pred CCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhcC
Q 013000 330 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVG 371 (451)
Q Consensus 330 g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~ 371 (451)
.+|+.+||++...+ .-+..|+.+|..+|..|...+...
T Consensus 277 ~~vya~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~l~~~ 314 (325)
T 2q7v_A 277 PMLFAAGDVSDYIY----RQLATSVGAGTRAAMMTERQLAAL 314 (325)
T ss_dssp TTEEECSTTTCSSC----CCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEeecccCccH----HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 57999999997532 236678889999998888776643
No 212
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=89.17 E-value=0.54 Score=46.70 Aligned_cols=33 Identities=9% Similarity=0.186 Sum_probs=25.0
Q ss_pred cCCEEEEcccccccCCcchhccccchHHHHHHHHHHHH
Q 013000 329 SKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAE 366 (451)
Q Consensus 329 ~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~ 366 (451)
..+|+.+||+++. | .-...|+.+|..+|..|..
T Consensus 318 ~~~IyA~GD~~~~--~---~l~~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 318 VDNIYAIGDVTDR--V---MLTPVAINEGAAFVDTVFA 350 (490)
T ss_dssp STTEEECGGGGCS--C---CCHHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeccCCC--c---cCHHHHHHHHHHHHHHhcC
Confidence 4689999999963 2 2345788889998888864
No 213
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=88.83 E-value=0.26 Score=48.15 Aligned_cols=58 Identities=7% Similarity=-0.051 Sum_probs=46.4
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCCh
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 185 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 185 (451)
..|-+.|.+.+.+.| ++|+.+++|+++.. .++.+.....+|+++.||.||.|-|.++.
T Consensus 234 ~~l~~~l~~~~~~~G-~~i~~~~~V~~I~~--------------------~~~~v~~v~~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYG-GTYMLNKPVDDIIM--------------------ENGKVVGVKSEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHT-CCCBCSCCCCEEEE--------------------ETTEEEEEEETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcC-CEEECCCEEEEEEE--------------------eCCEEEEEEECCeEEECCEEEECCCCCcc
Confidence 477888888888777 79999999999976 33555533358889999999999999864
No 214
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=88.65 E-value=0.47 Score=47.01 Aligned_cols=26 Identities=31% Similarity=0.406 Sum_probs=21.4
Q ss_pred CCeeEEEeCCCc-EEEeeEEEeecCCC
Q 013000 158 GHLAKLDLSDGT-SLYAKLVVGADGGK 183 (451)
Q Consensus 158 ~~~v~v~~~dg~-~~~adlvVgADG~~ 183 (451)
...+.|...+|+ ++.+|.||-|.|..
T Consensus 135 ~~~v~v~~~~g~~~~~~d~lviATGs~ 161 (483)
T 3dgh_A 135 SHTLLAKLKSGERTITAQTFVIAVGGR 161 (483)
T ss_dssp TTEEEEECTTCCEEEEEEEEEECCCEE
T ss_pred CCEEEEEeCCCeEEEEcCEEEEeCCCC
Confidence 366888888885 79999999999953
No 215
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=88.54 E-value=0.87 Score=49.34 Aligned_cols=35 Identities=9% Similarity=0.071 Sum_probs=27.7
Q ss_pred cCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhh
Q 013000 329 SKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIA 369 (451)
Q Consensus 329 ~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~ 369 (451)
..+|+.+||++... ++..|+.+|..+|..|...+.
T Consensus 410 ~p~IyAaGD~a~~~------~l~~A~~~G~~aA~~i~~~lg 444 (965)
T 2gag_A 410 VANQHLAGAMTGRL------DTASALSTGAATGAAAATAAG 444 (965)
T ss_dssp CTTEEECGGGGTCC------SHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEecCCch------hHHHHHHHHHHHHHHHHHHcC
Confidence 46899999998652 345899999999999887654
No 216
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=88.52 E-value=0.27 Score=47.07 Aligned_cols=40 Identities=13% Similarity=0.149 Sum_probs=29.4
Q ss_pred CceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCC
Q 013000 122 FQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKS 184 (451)
Q Consensus 122 ~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S 184 (451)
+++++.+++|+.+.. ... .|.+.+ .++.+|.||.|.|.+.
T Consensus 74 ~v~~~~~~~v~~i~~--------------------~~~--~v~~~~-~~~~~d~lviAtG~~p 113 (384)
T 2v3a_A 74 NARILTHTRVTGIDP--------------------GHQ--RIWIGE-EEVRYRDLVLAWGAEP 113 (384)
T ss_dssp TCEEECSCCCCEEEG--------------------GGT--EEEETT-EEEECSEEEECCCEEE
T ss_pred CcEEEeCCEEEEEEC--------------------CCC--EEEECC-cEEECCEEEEeCCCCc
Confidence 389999999998854 223 344444 4799999999999754
No 217
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=88.03 E-value=1.3 Score=43.25 Aligned_cols=38 Identities=21% Similarity=0.088 Sum_probs=28.4
Q ss_pred cCCEEEEcccccccCCcchhc-----cccchHHHHHHHHHHHH
Q 013000 329 SKRVVLIGDAAHTVHPLAGQG-----VNLGFGDASTLSRIIAE 366 (451)
Q Consensus 329 ~g~v~LvGDAAh~~~P~~g~G-----~~~al~da~~La~~L~~ 366 (451)
..+|+.+||+|....+.+|.- +..|.+.|..+|+.|..
T Consensus 268 ~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g 310 (437)
T 4eqs_A 268 VPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAG 310 (437)
T ss_dssp STTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcC
Confidence 468999999998777655543 45677788888888753
No 218
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=87.66 E-value=1.1 Score=44.04 Aligned_cols=58 Identities=14% Similarity=0.163 Sum_probs=46.6
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEE-eCCCcEEEeeEEEeecCCCCh
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLD-LSDGTSLYAKLVVGADGGKSR 185 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~-~~dg~~~~adlvVgADG~~S~ 185 (451)
..+.+.|.+.+++.| ++++.+++|++++. +.++.+.|. +.||+ +.+|.||-|-|....
T Consensus 211 ~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~-------------------~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 211 QDMRRGLHAAMEEKG-IRILCEDIIQSVSA-------------------DADGRRVATTMKHGE-IVADQVMLALGRMPN 269 (463)
T ss_dssp HHHHHHHHHHHHHTT-CEEECSCCEEEEEE-------------------CTTSCEEEEESSSCE-EEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHHCC-CEEECCCEEEEEEE-------------------cCCCEEEEEEcCCCe-EEeCEEEEeeCcccC
Confidence 466777888888876 99999999999975 122346788 88998 999999999998554
No 219
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=87.61 E-value=2 Score=41.91 Aligned_cols=64 Identities=16% Similarity=0.115 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCC--
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKS-- 184 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S-- 184 (451)
..+.+.+.+.+.+. ++++.+++|.+++. .+ .+...+.||.++.+|.||-|-|...
T Consensus 190 ~~~~~~l~~~l~~~--v~i~~~~~v~~i~~--------------------~~-~v~~v~~~g~~i~~D~Vv~a~G~~p~~ 246 (449)
T 3kd9_A 190 KEVTDILEEKLKKH--VNLRLQEITMKIEG--------------------EE-RVEKVVTDAGEYKAELVILATGIKPNI 246 (449)
T ss_dssp HHHHHHHHHHHTTT--SEEEESCCEEEEEC--------------------SS-SCCEEEETTEEEECSEEEECSCEEECC
T ss_pred HHHHHHHHHHHHhC--cEEEeCCeEEEEec--------------------cC-cEEEEEeCCCEEECCEEEEeeCCccCH
Confidence 45667777777665 89999999999864 22 3433456788899999999999853
Q ss_pred hhhhhhCCC
Q 013000 185 RVRELAGFK 193 (451)
Q Consensus 185 ~vR~~l~~~ 193 (451)
.+-+.++..
T Consensus 247 ~l~~~~gl~ 255 (449)
T 3kd9_A 247 ELAKQLGVR 255 (449)
T ss_dssp HHHHHTTCC
T ss_pred HHHHhCCcc
Confidence 344455544
No 220
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=87.36 E-value=1.9 Score=39.36 Aligned_cols=36 Identities=19% Similarity=0.200 Sum_probs=27.4
Q ss_pred CCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhh
Q 013000 330 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIA 369 (451)
Q Consensus 330 g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~ 369 (451)
.+|+.+||+++.. | ..+..|+.+|..+|..|.+.+.
T Consensus 277 ~~v~a~GD~~~~~-~---~~~~~A~~~g~~aa~~i~~~l~ 312 (315)
T 3r9u_A 277 AGLFAAGDLRKDA-P---KQVICAAGDGAVAALSAMAYIE 312 (315)
T ss_dssp TTEEECGGGBTTC-C---CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeecccCCc-h---hhhhhHHhhHHHHHHHHHHHHH
Confidence 5899999998642 2 3456788888888888877664
No 221
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=87.18 E-value=1 Score=44.28 Aligned_cols=58 Identities=17% Similarity=0.201 Sum_probs=45.1
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeC-CC--cEEEeeEEEeecCCC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS-DG--TSLYAKLVVGADGGK 183 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-dg--~~~~adlvVgADG~~ 183 (451)
..+.+.+.+.+++.| ++++.+++|++++. .++.+.+.+. || +++.+|.||-|-|..
T Consensus 212 ~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~--------------------~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~ 270 (464)
T 2a8x_A 212 ADVSKEIEKQFKKLG-VTILTATKVESIAD--------------------GGSQVTVTVTKDGVAQELKAEKVLQAIGFA 270 (464)
T ss_dssp HHHHHHHHHHHHHHT-CEEECSCEEEEEEE--------------------CSSCEEEEEESSSCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHcC-CEEEeCcEEEEEEE--------------------cCCeEEEEEEcCCceEEEEcCEEEECCCCC
Confidence 456677777777776 99999999999975 2344677775 67 579999999999986
Q ss_pred Ch
Q 013000 184 SR 185 (451)
Q Consensus 184 S~ 185 (451)
..
T Consensus 271 p~ 272 (464)
T 2a8x_A 271 PN 272 (464)
T ss_dssp EC
T ss_pred cc
Confidence 54
No 222
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=87.06 E-value=1.2 Score=43.44 Aligned_cols=69 Identities=16% Similarity=0.176 Sum_probs=49.5
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCC--
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKS-- 184 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S-- 184 (451)
..+.+.|.+.+++.| ++++.+++|++++. . +. ++....|.+.||+++.+|+||.|.|...
T Consensus 191 ~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~---------~-~~-------~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~ 252 (431)
T 1q1r_A 191 PPVSAFYEHLHREAG-VDIRTGTQVCGFEM---------S-TD-------QQKVTAVLCEDGTRLPADLVIAGIGLIPNC 252 (431)
T ss_dssp HHHHHHHHHHHHHHT-CEEECSCCEEEEEE---------C-TT-------TCCEEEEEETTSCEEECSEEEECCCEEECC
T ss_pred HHHHHHHHHHHHhCC-eEEEeCCEEEEEEe---------c-cC-------CCcEEEEEeCCCCEEEcCEEEECCCCCcCc
Confidence 456677778887776 99999999999853 0 00 1233368889999999999999999754
Q ss_pred hhhhhhCCC
Q 013000 185 RVRELAGFK 193 (451)
Q Consensus 185 ~vR~~l~~~ 193 (451)
.+-+.++..
T Consensus 253 ~l~~~~gl~ 261 (431)
T 1q1r_A 253 ELASAAGLQ 261 (431)
T ss_dssp HHHHHTTCC
T ss_pred chhhccCCC
Confidence 344445544
No 223
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=87.04 E-value=1.9 Score=39.59 Aligned_cols=36 Identities=14% Similarity=0.126 Sum_probs=28.2
Q ss_pred CCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhh
Q 013000 330 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIA 369 (451)
Q Consensus 330 g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~ 369 (451)
.+|+.+||+++... ..+..|+.+|..+|..|...+.
T Consensus 281 ~~vya~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~l~ 316 (319)
T 3cty_A 281 PGVYAAGDVTSGNF----AQIASAVGDGCKAALSLYSDSI 316 (319)
T ss_dssp TTEEECSTTBTTCC----CCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEeecccCcch----hhHHHHHHHHHHHHHHHHHHhh
Confidence 57999999997521 2466789999999999887764
No 224
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=86.89 E-value=0.64 Score=45.63 Aligned_cols=57 Identities=9% Similarity=-0.042 Sum_probs=45.5
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccC--CCee-EEEeCCCcEEEeeEEEeecCCC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTK--GHLA-KLDLSDGTSLYAKLVVGADGGK 183 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v-~v~~~dg~~~~adlvVgADG~~ 183 (451)
..|-+.|.+.+.+.| ++|+.+++|+++.. . ++.+ .|.. +|+++.||.||.|-|.+
T Consensus 242 ~~l~~al~~~~~~~G-~~i~~~~~V~~i~~--------------------~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 242 GELPQGFARLSAIYG-GTYMLDTPIDEVLY--------------------KKDTGKFEGVKT-KLGTFKAPLVIADPTYF 299 (453)
T ss_dssp THHHHHHHHHHHHTT-CEEECSCCCCEEEE--------------------ETTTTEEEEEEE-TTEEEECSCEEECGGGC
T ss_pred HHHHHHHHHHHHHcC-CEEECCCEEEEEEE--------------------ECCCCeEEEEEE-CCeEEECCEEEECCCcc
Confidence 468888888888887 79999999999976 2 3443 4554 68889999999999998
Q ss_pred Ch
Q 013000 184 SR 185 (451)
Q Consensus 184 S~ 185 (451)
+.
T Consensus 300 ~~ 301 (453)
T 2bcg_G 300 PE 301 (453)
T ss_dssp GG
T ss_pred ch
Confidence 64
No 225
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=86.68 E-value=2.2 Score=38.95 Aligned_cols=37 Identities=16% Similarity=0.158 Sum_probs=27.5
Q ss_pred CCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhc
Q 013000 330 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAV 370 (451)
Q Consensus 330 g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~ 370 (451)
.+|+.+||++.... .-+..|+.++..+|..|...+..
T Consensus 270 ~~vya~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~l~~ 306 (310)
T 1fl2_A 270 KGVFAAGDCTTVPY----KQIIIATGEGAKASLSAFDYLIR 306 (310)
T ss_dssp TTEEECSTTBSCSS----CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeecccCCcc----hhhhhhHhhHHHHHHHHHHHHHH
Confidence 57999999997532 23456888888888888776653
No 226
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=86.58 E-value=1.3 Score=46.11 Aligned_cols=51 Identities=6% Similarity=-0.055 Sum_probs=37.2
Q ss_pred HHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeC---CCcEEEeeEEEeecCCC
Q 013000 110 HSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS---DGTSLYAKLVVGADGGK 183 (451)
Q Consensus 110 ~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg~~~~adlvVgADG~~ 183 (451)
...|.+.+++.| |+|+.+++|++++. +.+.+... +++++.+|.||-|-|..
T Consensus 570 ~~~l~~~l~~~G-V~i~~~~~V~~i~~----------------------~~~~v~~~~~~~~~~i~aD~VV~A~G~~ 623 (690)
T 3k30_A 570 VNRIQRRLIENG-VARVTDHAVVAVGA----------------------GGVTVRDTYASIERELECDAVVMVTARL 623 (690)
T ss_dssp HHHHHHHHHHTT-CEEEESEEEEEEET----------------------TEEEEEETTTCCEEEEECSEEEEESCEE
T ss_pred HHHHHHHHHHCC-CEEEcCcEEEEEEC----------------------CeEEEEEccCCeEEEEECCEEEECCCCC
Confidence 345556666666 99999999999954 44555532 45589999999999964
No 227
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=85.23 E-value=0.29 Score=48.15 Aligned_cols=27 Identities=22% Similarity=0.209 Sum_probs=24.2
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALG 31 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~ 31 (451)
++||++|..|++ +|++|+|+|+++.+.
T Consensus 21 ~~GL~aA~~La~----~G~~V~vlE~~~~~G 47 (453)
T 2bcg_G 21 ITECILSGLLSV----DGKKVLHIDKQDHYG 47 (453)
T ss_dssp HHHHHHHHHHHH----TTCCEEEECSSSSSC
T ss_pred HHHHHHHHHHHH----CCCeEEEEeCCCCCC
Confidence 479999999999 499999999998773
No 228
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=85.00 E-value=3.4 Score=38.05 Aligned_cols=38 Identities=11% Similarity=-0.044 Sum_probs=29.1
Q ss_pred CCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhcC
Q 013000 330 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVG 371 (451)
Q Consensus 330 g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~ 371 (451)
.+|+.+||++.... ..+..|+.++..+|..|...+...
T Consensus 288 ~~vya~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~l~~~ 325 (333)
T 1vdc_A 288 PGVFAAGDVQDKKY----RQAITAAGTGCMAALDAEHYLQEI 325 (333)
T ss_dssp TTEEECGGGGCSSC----CCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEeeeccCCCc----hhHHHHHHhHHHHHHHHHHHHHhc
Confidence 58999999997532 245678889999999888877643
No 229
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=84.90 E-value=1.4 Score=42.40 Aligned_cols=54 Identities=9% Similarity=0.037 Sum_probs=43.8
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCCh
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 185 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 185 (451)
..+.+.+.+.+++.+ |+++.+++|++++. .. |.++||+++.+|+||-|-|....
T Consensus 218 ~~~~~~~~~~l~~~g-V~~~~~~~v~~i~~----------------------~~--v~~~~g~~~~~D~vi~a~G~~~~ 271 (409)
T 3h8l_A 218 PNSRKAVASIYNQLG-IKLVHNFKIKEIRE----------------------HE--IVDEKGNTIPADITILLPPYTGN 271 (409)
T ss_dssp HHHHHHHHHHHHHHT-CEEECSCCEEEECS----------------------SE--EEETTSCEEECSEEEEECCEECC
T ss_pred HHHHHHHHHHHHHCC-CEEEcCCceEEECC----------------------Ce--EEECCCCEEeeeEEEECCCCCcc
Confidence 467777777777776 99999999999843 22 77789999999999999997543
No 230
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=84.58 E-value=1.9 Score=42.91 Aligned_cols=43 Identities=14% Similarity=0.083 Sum_probs=36.0
Q ss_pred ceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCC
Q 013000 123 QKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKS 184 (451)
Q Consensus 123 v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S 184 (451)
.+|+++++|+.|.. +++..+.|++.||+++.||.||.|-+...
T Consensus 215 ~~i~~~~~V~~I~~-------------------~~~~~v~v~~~~g~~~~ad~VI~t~p~~~ 257 (516)
T 1rsg_A 215 NWLKLSCEVKSITR-------------------EPSKNVTVNCEDGTVYNADYVIITVPQSV 257 (516)
T ss_dssp GGEETTCCEEEEEE-------------------CTTSCEEEEETTSCEEEEEEEEECCCHHH
T ss_pred CEEEECCEEEEEEE-------------------cCCCeEEEEECCCcEEECCEEEECCCHHH
Confidence 57999999999976 12456899999999999999999998643
No 231
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=84.32 E-value=1.6 Score=43.18 Aligned_cols=59 Identities=10% Similarity=-0.026 Sum_probs=45.1
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCc-----EEEeeEEEeecC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGT-----SLYAKLVVGADG 181 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~-----~~~adlvVgADG 181 (451)
.++.+.+.+.+.+.| ++++.+++|++++. +.++.+.|.+.++. ++.+|.||-|-|
T Consensus 227 ~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~-------------------~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G 286 (483)
T 3dgh_A 227 QQMAELVAASMEERG-IPFLRKTVPLSVEK-------------------QDDGKLLVKYKNVETGEESEDVYDTVLWAIG 286 (483)
T ss_dssp HHHHHHHHHHHHHTT-CCEEETEEEEEEEE-------------------CTTSCEEEEEEETTTCCEEEEEESEEEECSC
T ss_pred HHHHHHHHHHHHhCC-CEEEeCCEEEEEEE-------------------cCCCcEEEEEecCCCCceeEEEcCEEEECcc
Confidence 456677778888776 99999999999975 12345677777654 799999999999
Q ss_pred CCCh
Q 013000 182 GKSR 185 (451)
Q Consensus 182 ~~S~ 185 (451)
....
T Consensus 287 ~~p~ 290 (483)
T 3dgh_A 287 RKGL 290 (483)
T ss_dssp EEEC
T ss_pred cccC
Confidence 8543
No 232
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=82.92 E-value=2.8 Score=40.96 Aligned_cols=44 Identities=14% Similarity=0.024 Sum_probs=35.5
Q ss_pred CCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeC---CCc--EEEeeEEEeecCCCC
Q 013000 121 EFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS---DGT--SLYAKLVVGADGGKS 184 (451)
Q Consensus 121 g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg~--~~~adlvVgADG~~S 184 (451)
.+++++.+++|++++. .++.+.|.+. +|+ ++.+|+||-|.|...
T Consensus 329 ~~v~i~~~~~v~~v~~--------------------~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p 377 (463)
T 3s5w_A 329 PRHAFRCMTTVERATA--------------------TAQGIELALRDAGSGELSVETYDAVILATGYER 377 (463)
T ss_dssp CCSEEETTEEEEEEEE--------------------ETTEEEEEEEETTTCCEEEEEESEEEECCCEEC
T ss_pred CCeEEEeCCEEEEEEe--------------------cCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCC
Confidence 3599999999999976 4466777776 676 499999999999753
No 233
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=82.80 E-value=0.51 Score=45.08 Aligned_cols=26 Identities=19% Similarity=0.331 Sum_probs=23.0
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCC-CCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSN-PAL 30 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~-~~~ 30 (451)
++||++|+.|+++ |++|+|+|++ ...
T Consensus 54 iaGL~aA~~L~~~----G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 54 IAGLVAGDLLTRA----GHDVTILEANANRV 80 (376)
T ss_dssp HHHHHHHHHHHHT----SCEEEEECSCSSCC
T ss_pred HHHHHHHHHHHHC----CCcEEEEecccccc
Confidence 5899999999994 9999999998 654
No 234
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=82.03 E-value=0.53 Score=46.60 Aligned_cols=54 Identities=11% Similarity=0.152 Sum_probs=42.6
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCC---cEEEeeEEEeecCCC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDG---TSLYAKLVVGADGGK 183 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg---~~~~adlvVgADG~~ 183 (451)
..|.+.|.+.+.+ .+|+++++|++|+. .++++.|++.+| +++.||.||.|-+.+
T Consensus 239 ~~l~~~l~~~l~~---~~i~~~~~V~~i~~--------------------~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~ 295 (489)
T 2jae_A 239 DRIYYAFQDRIGT---DNIVFGAEVTSMKN--------------------VSEGVTVEYTAGGSKKSITADYAICTIPPH 295 (489)
T ss_dssp THHHHHHHHHHCG---GGEETTCEEEEEEE--------------------ETTEEEEEEEETTEEEEEEESEEEECSCHH
T ss_pred HHHHHHHHHhcCC---CeEEECCEEEEEEE--------------------cCCeEEEEEecCCeEEEEECCEEEECCCHH
Confidence 4566667766632 58999999999987 456788988887 579999999998765
No 235
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=82.03 E-value=2.5 Score=39.62 Aligned_cols=55 Identities=9% Similarity=0.066 Sum_probs=40.4
Q ss_pred HHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEE-eeEEEeecCCCCh
Q 013000 111 SSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLY-AKLVVGADGGKSR 185 (451)
Q Consensus 111 ~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~-adlvVgADG~~S~ 185 (451)
+.|.+.+.+.++++++.+++|++++. .++.+.|.+.||+++. +|.||-|.|....
T Consensus 218 ~~l~~~l~~~g~v~~~~~~~v~~i~~--------------------~~~~~~v~~~~g~~~~~~d~vi~a~G~~~~ 273 (369)
T 3d1c_A 218 QRLGNVIKQGARIEMNVHYTVKDIDF--------------------NNGQYHISFDSGQSVHTPHEPILATGFDAT 273 (369)
T ss_dssp HHHHHHHHTTCCEEEECSCCEEEEEE--------------------ETTEEEEEESSSCCEEESSCCEECCCBCGG
T ss_pred HHHHHHHhhCCcEEEecCcEEEEEEe--------------------cCCceEEEecCCeEeccCCceEEeeccCCc
Confidence 45555555552399999999999864 3356788889998665 5999999997644
No 236
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=81.64 E-value=3.1 Score=42.61 Aligned_cols=56 Identities=9% Similarity=-0.009 Sum_probs=42.6
Q ss_pred hHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccC--CCeeEEEeCCCcEEEeeEEEeecC
Q 013000 106 NKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTK--GHLAKLDLSDGTSLYAKLVVGADG 181 (451)
Q Consensus 106 R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~v~~~dg~~~~adlvVgADG 181 (451)
-..|-+.|.+.+...| ++|+.++.|..|.. ++ +....|...+|+++.||.||....
T Consensus 377 ~g~L~qaL~r~~~~~G-g~i~l~~~V~~I~~-------------------~~~~g~v~gV~~~~Ge~i~A~~VVs~~~ 434 (650)
T 1vg0_A 377 QGELPQCFCRMCAVFG-GIYCLRHSVQCLVV-------------------DKESRKCKAVIDQFGQRIISKHFIIEDS 434 (650)
T ss_dssp TTHHHHHHHHHHHHTT-CEEESSCCEEEEEE-------------------ETTTCCEEEEEETTSCEEECSEEEEEGG
T ss_pred hhHHHHHHHHHHHHcC-CEEEeCCEeeEEEE-------------------eCCCCeEEEEEeCCCCEEEcCEEEEChh
Confidence 3667788888888887 79999999999876 12 233445567899999999998444
No 237
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=81.58 E-value=0.5 Score=45.71 Aligned_cols=41 Identities=7% Similarity=-0.035 Sum_probs=33.5
Q ss_pred ceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCC
Q 013000 123 QKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKS 184 (451)
Q Consensus 123 v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S 184 (451)
.+|+.+++|++++. .++++.|+..+|+ +.||.||-|-+..-
T Consensus 218 ~~v~~~~~V~~i~~--------------------~~~~v~v~~~~g~-~~ad~Vv~a~~~~~ 258 (424)
T 2b9w_A 218 HPAERNVDITRITR--------------------EDGKVHIHTTDWD-RESDVLVLTVPLEK 258 (424)
T ss_dssp SCCBCSCCEEEEEC--------------------CTTCEEEEESSCE-EEESEEEECSCHHH
T ss_pred ceEEcCCEEEEEEE--------------------ECCEEEEEECCCe-EEcCEEEECCCHHH
Confidence 57899999999976 3456888888886 89999999988753
No 238
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=80.99 E-value=2.8 Score=42.03 Aligned_cols=59 Identities=15% Similarity=0.014 Sum_probs=50.0
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCChh
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 186 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 186 (451)
.++.+.|.+.+++.+ ++++.++.+..++. .+..+.|.+.++.++.+|.|+-|-|++-.+
T Consensus 263 ~ei~~~l~~~l~~~g-i~~~~~~~v~~~~~--------------------~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt 321 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQG-VMFKNGILPKKLTK--------------------MDDKILVEFSDKTSELYDTVLYAIGRKGDI 321 (542)
T ss_dssp HHHHHHHHHHHHHTT-CEEEETCCEEEEEE--------------------ETTEEEEEETTSCEEEESEEEECSCEEESC
T ss_pred hhHHHHHHHHHHhhc-ceeecceEEEEEEe--------------------cCCeEEEEEcCCCeEEEEEEEEcccccCCc
Confidence 566777888888887 99999999999976 567899999999999999999999975444
No 239
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=80.84 E-value=3.6 Score=37.90 Aligned_cols=58 Identities=10% Similarity=0.055 Sum_probs=42.7
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeC---CC--cEEEeeEEEeecC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS---DG--TSLYAKLVVGADG 181 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg--~~~~adlvVgADG 181 (451)
..+.+.|.+.+.+.+ ++++.+++|++++. ++....|.+. +| +++.+|.||-|-|
T Consensus 191 ~~~~~~l~~~l~~~g-v~v~~~~~v~~i~~--------------------~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G 249 (335)
T 2zbw_A 191 EASVKELMKAHEEGR-LEVLTPYELRRVEG--------------------DERVRWAVVFHNQTQEELALEVDAVLILAG 249 (335)
T ss_dssp HHHHHHHHHHHHTTS-SEEETTEEEEEEEE--------------------SSSEEEEEEEETTTCCEEEEECSEEEECCC
T ss_pred HHHHHHHHhccccCC-eEEecCCcceeEcc--------------------CCCeeEEEEEECCCCceEEEecCEEEEeec
Confidence 456667777777766 99999999999964 2233345554 77 5799999999999
Q ss_pred CCCh
Q 013000 182 GKSR 185 (451)
Q Consensus 182 ~~S~ 185 (451)
....
T Consensus 250 ~~p~ 253 (335)
T 2zbw_A 250 YITK 253 (335)
T ss_dssp EEEE
T ss_pred CCCC
Confidence 6543
No 240
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=80.60 E-value=0.55 Score=46.90 Aligned_cols=38 Identities=8% Similarity=0.056 Sum_probs=28.2
Q ss_pred cCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhh
Q 013000 329 SKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIA 369 (451)
Q Consensus 329 ~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~ 369 (451)
.|||.+.|++.+...+-+- .-|++++...|+.|...+.
T Consensus 471 ~~rl~FAGe~ts~~~~g~v---~GA~~SG~raA~~i~~~~~ 508 (516)
T 1rsg_A 471 DSRIRFAGEHTIMDGAGCA---YGAWESGRREATRISDLLK 508 (516)
T ss_dssp SSSEEECSTTSCSTTBTSH---HHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEeccccccCCCccc---hhHHHHHHHHHHHHHHHhh
Confidence 5899999999987655443 4467888888877776554
No 241
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=80.05 E-value=5.3 Score=36.86 Aligned_cols=36 Identities=14% Similarity=0.060 Sum_probs=26.1
Q ss_pred CCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhh
Q 013000 330 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIA 369 (451)
Q Consensus 330 g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~ 369 (451)
.+|+.+||++.... .-+..|+.++..+|..+...+.
T Consensus 281 ~~iya~GD~~~~~~----~~~~~A~~~g~~aA~~i~~~l~ 316 (335)
T 2a87_A 281 PGVFAAGDLVDRTY----RQAVTAAGSGCAAAIDAERWLA 316 (335)
T ss_dssp TTEEECGGGTCCSC----CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeeecCCccH----HHHHHHHHhHHHHHHHHHHHhh
Confidence 57999999997532 2355677788888888776654
No 242
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=79.60 E-value=7.1 Score=39.09 Aligned_cols=25 Identities=28% Similarity=0.133 Sum_probs=22.4
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPA 29 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~ 29 (451)
|||+++|..++++ |.+|+|||+...
T Consensus 52 paG~~aA~~aa~~----G~kValIE~~~~ 76 (542)
T 4b1b_A 52 PGGMASAKEAAAH----GARVLLFDYVKP 76 (542)
T ss_dssp HHHHHHHHHHHTT----TCCEEEECCCCC
T ss_pred HHHHHHHHHHHHC----CCeEEEEecccc
Confidence 6899999999995 999999998764
No 243
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=79.53 E-value=1.5 Score=43.43 Aligned_cols=33 Identities=12% Similarity=0.173 Sum_probs=24.6
Q ss_pred cCCEEEEcccccccCCcchhccccchHHHHHHHHHHHH
Q 013000 329 SKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAE 366 (451)
Q Consensus 329 ~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~ 366 (451)
..+|+.+||+++. | .-+..|+.+|..+|..|..
T Consensus 322 ~~~IyA~GD~~~~--~---~l~~~A~~~g~~aa~~i~g 354 (495)
T 2wpf_A 322 VPNIYAIGDITDR--L---MLTPVAINEGAALVDTVFG 354 (495)
T ss_dssp STTEEECGGGGCS--C---CCHHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeccCCC--c---cCHHHHHHHHHHHHHHhcC
Confidence 4689999999963 1 2345688888888888864
No 244
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=79.39 E-value=2.5 Score=41.61 Aligned_cols=37 Identities=19% Similarity=0.162 Sum_probs=30.8
Q ss_pred cCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhh
Q 013000 329 SKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIA 369 (451)
Q Consensus 329 ~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~ 369 (451)
.+++.+.|++.+. .+.|+.-|+++|..+|+.|...++
T Consensus 450 ~~~l~faG~~~~~----~~~~v~gAi~sg~~aA~~i~~~l~ 486 (489)
T 2jae_A 450 VDKIYFAGDHLSN----AIAWQHGALTSARDVVTHIHERVA 486 (489)
T ss_dssp BTTEEECSGGGBS----STTSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEeEHHhcc----CccHHHHHHHHHHHHHHHHHHHHh
Confidence 4799999998752 578889999999999999877654
No 245
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=78.85 E-value=0.78 Score=43.60 Aligned_cols=26 Identities=19% Similarity=0.290 Sum_probs=23.2
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPAL 30 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~ 30 (451)
++||++|..|++ +|++|+|+|+++.+
T Consensus 11 ~~Gl~~A~~l~~----~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 11 LFGAVCANELKK----LNKKVLVIEKRNHI 36 (367)
T ss_dssp HHHHHHHHHHGG----GTCCEEEECSSSSS
T ss_pred HHHHHHHHHHHh----CCCcEEEEecCCCC
Confidence 589999999999 49999999998765
No 246
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=77.91 E-value=0.63 Score=44.83 Aligned_cols=26 Identities=19% Similarity=0.507 Sum_probs=23.4
Q ss_pred CcHHHHHHHhcCCCCCC-CcEEEEEcCCCCC
Q 013000 1 MVGMALACSLASMPLTK-HLSVAIIDSNPAL 30 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~-g~~V~viEr~~~~ 30 (451)
++||++|..|++ + |++|+|+|+++.+
T Consensus 17 ~~Gl~aA~~L~~----~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 17 FFGLTIAERVAT----QLDKRVLVLERRPHI 43 (399)
T ss_dssp HHHHHHHHHHHH----HSCCCEEEECSSSSS
T ss_pred HHHHHHHHHHHH----hCCCCEEEEeCCCCC
Confidence 489999999999 5 8999999999765
No 247
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=77.29 E-value=0.85 Score=43.88 Aligned_cols=26 Identities=38% Similarity=0.506 Sum_probs=23.3
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPAL 30 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~ 30 (451)
++||++|..|++ +|++|+|+|+++..
T Consensus 39 ~aGl~aA~~l~~----~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 39 FAGSVLAERLAS----SGQRVLIVDRRPHI 64 (397)
T ss_dssp HHHHHHHHHHHH----TTCCEEEECSSSSS
T ss_pred HHHHHHHHHHHH----CCCceEEEeccCCC
Confidence 589999999999 49999999998765
No 248
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=77.24 E-value=1.9 Score=42.72 Aligned_cols=58 Identities=10% Similarity=0.038 Sum_probs=42.6
Q ss_pred HHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCCh--hhhhhCC
Q 013000 115 SCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR--VRELAGF 192 (451)
Q Consensus 115 ~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~--vR~~l~~ 192 (451)
+.+.+.| ++|+.+++|++++. ++....|.+.||+++.+|+||-|-|.++. +-+.++.
T Consensus 265 ~~l~~~G-V~v~~~~~v~~i~~--------------------~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~ 323 (493)
T 1y56_A 265 QELERWG-IDYVHIPNVKRVEG--------------------NEKVERVIDMNNHEYKVDALIFADGRRPDINPITQAGG 323 (493)
T ss_dssp HHHHHHT-CEEEECSSEEEEEC--------------------SSSCCEEEETTCCEEECSEEEECCCEEECCHHHHHTTC
T ss_pred HHHHhCC-cEEEeCCeeEEEec--------------------CCceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCC
Confidence 4455555 99999999999964 22344567889999999999999998654 3455554
Q ss_pred C
Q 013000 193 K 193 (451)
Q Consensus 193 ~ 193 (451)
.
T Consensus 324 ~ 324 (493)
T 1y56_A 324 K 324 (493)
T ss_dssp C
T ss_pred C
Confidence 3
No 249
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=76.99 E-value=1.1 Score=42.87 Aligned_cols=27 Identities=33% Similarity=0.474 Sum_probs=23.7
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALG 31 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~ 31 (451)
++||++|..|++ +|++|+|+|+++.+.
T Consensus 13 ~~Gl~~A~~l~~----~g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 13 FSGAVIGRQLAE----KGHQVHIIDQRDHIG 39 (384)
T ss_dssp HHHHHHHHHHHT----TTCEEEEEESSSSSS
T ss_pred HHHHHHHHHHHH----CCCcEEEEEecCCcC
Confidence 479999999999 499999999987663
No 250
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=76.32 E-value=1.6 Score=41.71 Aligned_cols=55 Identities=7% Similarity=-0.048 Sum_probs=40.8
Q ss_pred HHHHHHHHHh----hcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCC
Q 013000 108 VLHSSLLSCM----QNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 183 (451)
Q Consensus 108 ~L~~~L~~~~----~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 183 (451)
.+...+.+.+ ++.+ ++++.++++..++. .+....+.+.||+++.+|+||.|-|..
T Consensus 199 ~~~~~~~~~~~~~l~~~g-i~v~~~~~v~~v~~--------------------~~~~~~v~~~~g~~i~~D~vi~~~g~~ 257 (401)
T 3vrd_B 199 QFTKGWERLYGFGTENAL-IEWHPGPDAAVVKT--------------------DTEAMTVETSFGETFKAAVINLIPPQR 257 (401)
T ss_dssp HHHHHHHHHSCTTSTTCS-EEEECTTTTCEEEE--------------------ETTTTEEEETTSCEEECSEEEECCCEE
T ss_pred cccHHHHHHHHHHHHhcC-cEEEeCceEEEEEe--------------------cccceEEEcCCCcEEEeeEEEEecCcC
Confidence 3444444443 3444 89999999988865 445677888999999999999998864
No 251
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=75.51 E-value=5 Score=36.52 Aligned_cols=39 Identities=13% Similarity=0.053 Sum_probs=29.3
Q ss_pred CCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhc
Q 013000 330 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAV 370 (451)
Q Consensus 330 g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~ 370 (451)
.+|+.+||++... .....+..|+.+|..+|..+...+..
T Consensus 280 ~~vya~GD~~~~~--~~~~~~~~A~~~g~~aa~~i~~~l~~ 318 (323)
T 3f8d_A 280 PGVFAAGDCTSAW--LGFRQVITAVAQGAVAATSAYRYVTE 318 (323)
T ss_dssp TTEEECSTTBSTT--TTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEcceecCCC--CcccceeehhhHHHHHHHHHHHHHHH
Confidence 5899999999753 12345677888888888888877654
No 252
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=75.22 E-value=4.1 Score=40.38 Aligned_cols=56 Identities=29% Similarity=0.264 Sum_probs=42.2
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCc----EEEeeEEEeecCC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGT----SLYAKLVVGADGG 182 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~----~~~adlvVgADG~ 182 (451)
..+.+.+.+.+++.| |+|+.+++|++++. ++....+...||+ ++.+|+||-|-|.
T Consensus 272 ~~~~~~~~~~L~~~G-V~v~~~~~v~~v~~--------------------~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 272 KKLSSYAQSHLENTS-IKVHLRTAVAKVEE--------------------KQLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp HHHHHHHHHHHHHTT-CEEETTEEEEEECS--------------------SEEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred HHHHHHHHHHHHhcc-eeeecCceEEEEeC--------------------CceEEEEEecCcccceeeeccCEEEEccCC
Confidence 567777788888887 99999999999953 1222344556774 6899999999996
Q ss_pred C
Q 013000 183 K 183 (451)
Q Consensus 183 ~ 183 (451)
.
T Consensus 331 ~ 331 (502)
T 4g6h_A 331 K 331 (502)
T ss_dssp E
T ss_pred c
Confidence 4
No 253
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=75.04 E-value=4.8 Score=39.62 Aligned_cols=59 Identities=12% Similarity=0.057 Sum_probs=44.3
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCC---Cc--EEEeeEEEeecC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSD---GT--SLYAKLVVGADG 181 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d---g~--~~~adlvVgADG 181 (451)
.++.+.+.+.+.+.| ++++.++++.+++. ..++.+.|.+.+ |+ ++.+|.||-|-|
T Consensus 225 ~~~~~~l~~~l~~~g-v~~~~~~~v~~i~~-------------------~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G 284 (488)
T 3dgz_A 225 QQMSSLVTEHMESHG-TQFLKGCVPSHIKK-------------------LPTNQLQVTWEDHASGKEDTGTFDTVLWAIG 284 (488)
T ss_dssp HHHHHHHHHHHHHTT-CEEEETEEEEEEEE-------------------CTTSCEEEEEEETTTTEEEEEEESEEEECSC
T ss_pred HHHHHHHHHHHHHCC-CEEEeCCEEEEEEE-------------------cCCCcEEEEEEeCCCCeeEEEECCEEEEccc
Confidence 467777888888776 99999999999865 123456676654 55 478999999999
Q ss_pred CCCh
Q 013000 182 GKSR 185 (451)
Q Consensus 182 ~~S~ 185 (451)
....
T Consensus 285 ~~p~ 288 (488)
T 3dgz_A 285 RVPE 288 (488)
T ss_dssp EEES
T ss_pred CCcc
Confidence 8543
No 254
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=74.44 E-value=0.9 Score=44.64 Aligned_cols=36 Identities=17% Similarity=0.054 Sum_probs=27.9
Q ss_pred cCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhh
Q 013000 329 SKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIA 369 (451)
Q Consensus 329 ~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~ 369 (451)
..+|+.+||++.. | .-+..|+.++..+|..|...+.
T Consensus 409 ~~~VfA~GD~~~g--~---~~v~~A~~~G~~aA~~i~~~L~ 444 (456)
T 2vdc_G 409 MDGVFAAGDIVRG--A---SLVVWAIRDGRDAAEGIHAYAK 444 (456)
T ss_dssp STTEEECGGGGSS--C---CSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeccccCC--c---hHHHHHHHHHHHHHHHHHHHhh
Confidence 4689999999864 2 2356789999999999887664
No 255
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=72.77 E-value=3 Score=40.59 Aligned_cols=52 Identities=8% Similarity=0.167 Sum_probs=41.9
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 183 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 183 (451)
..+.+.+.+.+.+.+ ++++.+++|++++. ..+.+.+|+++.+|+||-|-|..
T Consensus 188 ~~~~~~~~~~l~~~g-V~i~~~~~v~~~~~------------------------~~v~~~~g~~~~~D~vl~a~G~~ 239 (437)
T 4eqs_A 188 ADMNQPILDELDKRE-IPYRLNEEINAING------------------------NEITFKSGKVEHYDMIIEGVGTH 239 (437)
T ss_dssp GGGGHHHHHHHHHTT-CCEEESCCEEEEET------------------------TEEEETTSCEEECSEEEECCCEE
T ss_pred chhHHHHHHHhhccc-eEEEeccEEEEecC------------------------CeeeecCCeEEeeeeEEEEecee
Confidence 445566777777776 99999999998843 24677899999999999999974
No 256
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=72.46 E-value=1.3 Score=43.06 Aligned_cols=27 Identities=22% Similarity=0.306 Sum_probs=23.8
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALG 31 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~ 31 (451)
++||++|..|++ +|++|+|+|+++.+.
T Consensus 16 ~~gl~~a~~l~~----~g~~v~~~e~~~~~g 42 (433)
T 1d5t_A 16 LTECILSGIMSV----NGKKVLHMDRNPYYG 42 (433)
T ss_dssp HHHHHHHHHHHH----TTCCEEEECSSSSSC
T ss_pred HHHHHHHHHHHH----CCCcEEEEecCCCcc
Confidence 479999999999 499999999998763
No 257
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=72.19 E-value=1.2 Score=44.10 Aligned_cols=38 Identities=11% Similarity=0.115 Sum_probs=29.8
Q ss_pred cCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhc
Q 013000 329 SKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAV 370 (451)
Q Consensus 329 ~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~ 370 (451)
.+++.+.|++.+. .+ | ++.-|+++|...|+.|...+..
T Consensus 449 ~~~l~fAGe~t~~--~~-g-~~~GAi~SG~raA~~i~~~l~~ 486 (498)
T 2iid_A 449 QGRIYFAGEYTAQ--AH-G-WIDSTIKSGLRAARDVNLASEN 486 (498)
T ss_dssp BTTEEECSGGGSS--SS-S-CHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCcEEEEEccccc--CC-c-CHHHHHHHHHHHHHHHHHHhcC
Confidence 4799999999853 22 3 6788999999999999877653
No 258
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=70.41 E-value=1.6 Score=43.19 Aligned_cols=33 Identities=15% Similarity=0.190 Sum_probs=25.3
Q ss_pred cCCEEEEcccccccCCcchhccccchHHHHHHHHHHHH
Q 013000 329 SKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAE 366 (451)
Q Consensus 329 ~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~ 366 (451)
..+|+.+||++... + -...|+.+|..+|..|..
T Consensus 305 ~~~IyA~GD~~~~~-~----~~~~A~~~g~~aa~~i~~ 337 (492)
T 3ic9_A 305 VDHIFVAGDANNTL-T----LLHEAADDGKVAGTNAGA 337 (492)
T ss_dssp STTEEECGGGGTSS-C----SHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCC-c----cHHHHHHHHHHHHHHHcC
Confidence 46899999998642 2 245788899998888875
No 259
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=70.38 E-value=7.4 Score=38.22 Aligned_cols=53 Identities=11% Similarity=0.170 Sum_probs=40.2
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCc----EEEeeEEEeecCC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGT----SLYAKLVVGADGG 182 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~----~~~adlvVgADG~ 182 (451)
..|.+.|.+.+. .+|+++++|+.|+. .++.+.|++.+|+ ++.||.||.|-+.
T Consensus 241 ~~l~~~l~~~l~----~~i~~~~~V~~I~~--------------------~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~ 296 (498)
T 2iid_A 241 DKLPTAMYRDIQ----DKVHFNAQVIKIQQ--------------------NDQKVTVVYETLSKETPSVTADYVIVCTTS 296 (498)
T ss_dssp THHHHHHHHHTG----GGEESSCEEEEEEE--------------------CSSCEEEEEECSSSCCCEEEESEEEECSCH
T ss_pred HHHHHHHHHhcc----cccccCCEEEEEEE--------------------CCCeEEEEEecCCcccceEEeCEEEECCCh
Confidence 355556666653 27999999999987 4456888887775 4899999999986
Q ss_pred C
Q 013000 183 K 183 (451)
Q Consensus 183 ~ 183 (451)
.
T Consensus 297 ~ 297 (498)
T 2iid_A 297 R 297 (498)
T ss_dssp H
T ss_pred H
Confidence 4
No 260
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=69.17 E-value=7.8 Score=34.71 Aligned_cols=50 Identities=14% Similarity=0.119 Sum_probs=38.8
Q ss_pred HHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCC
Q 013000 109 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 183 (451)
Q Consensus 109 L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 183 (451)
+...+.+.+.+.+ ++++. ++|++++. .. .|.+.||+++.+|+||-|-|..
T Consensus 176 ~~~~~~~~l~~~g-v~i~~-~~v~~i~~----------------------~~-~v~~~~g~~~~~D~vi~a~G~~ 225 (297)
T 3fbs_A 176 PDADQHALLAARG-VRVET-TRIREIAG----------------------HA-DVVLADGRSIALAGLFTQPKLR 225 (297)
T ss_dssp CCHHHHHHHHHTT-CEEEC-SCEEEEET----------------------TE-EEEETTSCEEEESEEEECCEEE
T ss_pred CCHHHHHHHHHCC-cEEEc-ceeeeeec----------------------CC-eEEeCCCCEEEEEEEEEccCcc
Confidence 4555666676666 89985 88998854 22 7888999999999999999864
No 261
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=69.10 E-value=1.7 Score=42.74 Aligned_cols=27 Identities=22% Similarity=0.336 Sum_probs=23.9
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALG 31 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~ 31 (451)
++|+++|..|++ +|.+|+|+||++...
T Consensus 30 ~~g~~~a~~l~~----~g~~v~~~e~~~~~G 56 (475)
T 3p1w_A 30 LKECILSGLLSH----YGKKILVLDRNPYYG 56 (475)
T ss_dssp HHHHHHHHHHHH----TTCCEEEECSSSSSC
T ss_pred HHHHHHHHHHHH----CCCcEEEEeccCCCC
Confidence 379999999999 499999999998764
No 262
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=68.54 E-value=1.7 Score=43.02 Aligned_cols=56 Identities=9% Similarity=0.170 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhhcCCCceEEcCC--eeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPS--RLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKS 184 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S 184 (451)
..|.+.|.+.+.+ .+|+.++ +|++|.. .++.| ++.||+++.||.||-|-....
T Consensus 216 ~~l~~~la~~l~~---~~i~~~~~~~V~~I~~--------------------~~~~v--~~~~G~~~~ad~VI~a~p~~~ 270 (484)
T 4dsg_A 216 GIIYQAIKEKLPS---EKLTFNSGFQAIAIDA--------------------DAKTI--TFSNGEVVSYDYLISTVPFDN 270 (484)
T ss_dssp HHHHHHHHHHSCG---GGEEECGGGCEEEEET--------------------TTTEE--EETTSCEEECSEEEECSCHHH
T ss_pred HHHHHHHHhhhhh---CeEEECCCceeEEEEe--------------------cCCEE--EECCCCEEECCEEEECCCHHH
Confidence 4566666666642 2788894 5999976 33444 458899999999999887655
Q ss_pred hhh
Q 013000 185 RVR 187 (451)
Q Consensus 185 ~vR 187 (451)
..+
T Consensus 271 ~~~ 273 (484)
T 4dsg_A 271 LLR 273 (484)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 263
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=68.38 E-value=2 Score=44.39 Aligned_cols=40 Identities=3% Similarity=-0.154 Sum_probs=33.2
Q ss_pred ceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCC------CcEEEeeEEEeecCC
Q 013000 123 QKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSD------GTSLYAKLVVGADGG 182 (451)
Q Consensus 123 v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d------g~~~~adlvVgADG~ 182 (451)
++|+++++|+.|+. .+.++.|++.| |.++.||.||.|=..
T Consensus 411 l~I~l~~~V~~I~~--------------------~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~ 456 (662)
T 2z3y_A 411 LDIKLNTAVRQVRY--------------------TASGCEVIAVNTRSTSQTFIYKCDAVLCTLPL 456 (662)
T ss_dssp CEEETTEEEEEEEE--------------------ETTEEEEEEEESSCTTCEEEEEESEEEECCCH
T ss_pred CceecCCeEEEEEE--------------------CCCcEEEEEeecccCCCCeEEEeCEEEECCCH
Confidence 68999999999987 45678888876 568999999988763
No 264
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=67.85 E-value=2 Score=45.58 Aligned_cols=37 Identities=16% Similarity=0.143 Sum_probs=28.3
Q ss_pred CCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhh
Q 013000 330 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIA 369 (451)
Q Consensus 330 g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~ 369 (451)
|||++.|++.+...+ .-+.-|++++...|..|...+.
T Consensus 794 grL~FAGE~Ts~~~~---gtveGAi~SG~RAA~~Il~~l~ 830 (852)
T 2xag_A 794 PRLFFAGEHTIRNYP---ATVHGALLSGLREAGRIADQFL 830 (852)
T ss_dssp CCEEECSGGGCTTST---TSHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEehhHhCCCC---cCHHHHHHHHHHHHHHHHHHhh
Confidence 799999999886544 3466678888888888877664
No 265
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=67.71 E-value=8.9 Score=36.98 Aligned_cols=53 Identities=8% Similarity=-0.027 Sum_probs=39.9
Q ss_pred HHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCc--EEEeeEEEeecCCC
Q 013000 108 VLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGT--SLYAKLVVGADGGK 183 (451)
Q Consensus 108 ~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~--~~~adlvVgADG~~ 183 (451)
...+.+.+.+++.| |+++.+++|++++. +.+.+...+|. ++.+|+||-|-|..
T Consensus 201 ~~~~~l~~~l~~~G-V~~~~~~~v~~v~~----------------------~~~~~~~~~g~~~~i~~d~vi~~~G~~ 255 (430)
T 3hyw_A 201 ASKRLVEDLFAERN-IDWIANVAVKAIEP----------------------DKVIYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp THHHHHHHHHHHTT-CEEECSCEEEEECS----------------------SEEEEECTTSCEEEEECSEEEEECEEE
T ss_pred HHHHHHHHHHHhCC-eEEEeCceEEEEeC----------------------CceEEEeeCCCceEeecceEEEeccCC
Confidence 34455666666676 99999999999843 56667666654 79999999998864
No 266
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=66.86 E-value=6 Score=36.16 Aligned_cols=40 Identities=18% Similarity=0.101 Sum_probs=28.9
Q ss_pred CCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhcC
Q 013000 330 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVG 371 (451)
Q Consensus 330 g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~ 371 (451)
.+|+.+||+++.. ..-.-+..|+.+|..+|..|...+...
T Consensus 278 ~~vya~GD~~~~~--~~~~~~~~A~~~g~~aa~~i~~~l~~~ 317 (332)
T 3lzw_A 278 EGFFAAGDICTYE--GKVNLIASGFGEAPTAVNNAKAYMDPK 317 (332)
T ss_dssp TTEEECGGGEECT--TCCCCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred CCEEEccceecCC--CCcceEeeehhhHHHHHHHHHHhhChh
Confidence 5899999999642 122345678888899999888877543
No 267
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=66.44 E-value=2.4 Score=43.46 Aligned_cols=26 Identities=23% Similarity=0.226 Sum_probs=23.5
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPAL 30 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~ 30 (451)
|+|+++|+.|++ +|++|+|||+.+..
T Consensus 56 ~aGl~aA~~l~~----~G~~V~liE~~~~~ 81 (623)
T 3pl8_A 56 PIGCTYARELVG----AGYKVAMFDIGEID 81 (623)
T ss_dssp HHHHHHHHHHHH----TTCEEEEECSSCCC
T ss_pred HHHHHHHHHHHh----CCCcEEEEeccCCC
Confidence 589999999999 49999999998865
No 268
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=66.35 E-value=8.7 Score=37.99 Aligned_cols=67 Identities=16% Similarity=0.120 Sum_probs=48.3
Q ss_pred eechHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCC-----cEEEeeEEE
Q 013000 103 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDG-----TSLYAKLVV 177 (451)
Q Consensus 103 ~i~R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg-----~~~~adlvV 177 (451)
...|.++.+.|...+.+.+ ..|+++++|++++....... + ...+.++|+..|+ +++.|+.||
T Consensus 141 ~p~r~E~~~Yl~~~A~~~~-~~vrf~~~V~~v~~~~~~~~-------~-----~~~~~~~V~~~~~~~g~~~~~~ar~vV 207 (501)
T 4b63_A 141 LPARLEFEDYMRWCAQQFS-DVVAYGEEVVEVIPGKSDPS-------S-----SVVDFFTVRSRNVETGEISARRTRKVV 207 (501)
T ss_dssp CCBHHHHHHHHHHHHHTTG-GGEEESEEEEEEEEECSSTT-------S-----SCBCEEEEEEEETTTCCEEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHcC-CceEcceEEEeecccccccc-------c-----cccceEEEEEecCCCceEEEEEeCEEE
Confidence 4679999999999998886 68999999999976111000 0 0123577777654 268999999
Q ss_pred eecCC
Q 013000 178 GADGG 182 (451)
Q Consensus 178 gADG~ 182 (451)
-|.|.
T Consensus 208 latG~ 212 (501)
T 4b63_A 208 IAIGG 212 (501)
T ss_dssp ECCCC
T ss_pred ECcCC
Confidence 99994
No 269
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=66.32 E-value=1.9 Score=44.85 Aligned_cols=26 Identities=19% Similarity=0.308 Sum_probs=23.5
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPAL 30 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~ 30 (451)
||||++|+.|++ +|++|+|||+.+..
T Consensus 401 ~AGl~aA~~La~----~G~~V~liE~~~~~ 426 (690)
T 3k30_A 401 PSGLEAARALGV----RGYDVVLAEAGRDL 426 (690)
T ss_dssp HHHHHHHHHHHH----HTCEEEEECSSSSS
T ss_pred HHHHHHHHHHHH----CCCeEEEEecCCCC
Confidence 589999999999 49999999998765
No 270
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=65.42 E-value=9.8 Score=37.12 Aligned_cols=55 Identities=24% Similarity=0.299 Sum_probs=40.7
Q ss_pred HHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCC-CeeEEEeC--CCc--EEEeeEEEeecCC
Q 013000 108 VLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKG-HLAKLDLS--DGT--SLYAKLVVGADGG 182 (451)
Q Consensus 108 ~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~~~--dg~--~~~adlvVgADG~ 182 (451)
.+.+.+.+.+ . ++++.+++|++++. .+ +.+.|.+. ||+ ++.+|.||-|-|.
T Consensus 215 ~~~~~l~~~l---~-v~i~~~~~v~~i~~--------------------~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~ 270 (466)
T 3l8k_A 215 DIVNTLLSIL---K-LNIKFNSPVTEVKK--------------------IKDDEYEVIYSTKDGSKKSIFTNSVVLAAGR 270 (466)
T ss_dssp HHHHHHHHHH---C-CCEECSCCEEEEEE--------------------EETTEEEEEECCTTSCCEEEEESCEEECCCE
T ss_pred HHHHHHHhcC---E-EEEEECCEEEEEEE--------------------cCCCcEEEEEEecCCceEEEEcCEEEECcCC
Confidence 4444444444 2 89999999999965 33 56778887 676 8999999999998
Q ss_pred CChh
Q 013000 183 KSRV 186 (451)
Q Consensus 183 ~S~v 186 (451)
....
T Consensus 271 ~p~~ 274 (466)
T 3l8k_A 271 RPVI 274 (466)
T ss_dssp EECC
T ss_pred Cccc
Confidence 6543
No 271
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=64.24 E-value=9.2 Score=36.56 Aligned_cols=26 Identities=15% Similarity=0.215 Sum_probs=23.5
Q ss_pred CcHHHHHHHhcCCCCCCC-cEEEEEcCCCCC
Q 013000 1 MVGMALACSLASMPLTKH-LSVAIIDSNPAL 30 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g-~~V~viEr~~~~ 30 (451)
++||++|+.|++ +| ++|+|+|+++.+
T Consensus 16 ~aGl~aA~~L~~----~g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 16 PAGLAAGMYLEQ----AGFHDYTILERTDHV 42 (424)
T ss_dssp HHHHHHHHHHHH----TTCCCEEEECSSSCS
T ss_pred HHHHHHHHHHHh----CCCCcEEEEECCCCC
Confidence 589999999999 49 899999999876
No 272
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=63.89 E-value=2.7 Score=43.88 Aligned_cols=26 Identities=19% Similarity=0.208 Sum_probs=23.4
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPAL 30 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~ 30 (451)
||||++|..|++ +|++|+|||+.+.+
T Consensus 399 pAGl~aA~~L~~----~G~~Vtlie~~~~~ 424 (729)
T 1o94_A 399 PSGSEAARVLME----SGYTVHLTDTAEKI 424 (729)
T ss_dssp HHHHHHHHHHHH----TTCEEEEECSSSST
T ss_pred HHHHHHHHHHHH----CCCeEEEEeCCCCc
Confidence 689999999999 49999999998765
No 273
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=62.96 E-value=8.2 Score=37.17 Aligned_cols=53 Identities=6% Similarity=-0.078 Sum_probs=39.1
Q ss_pred HHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCC--CcEEEeeEEEeecCCCC
Q 013000 109 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSD--GTSLYAKLVVGADGGKS 184 (451)
Q Consensus 109 L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d--g~~~~adlvVgADG~~S 184 (451)
+...+.+.+++.+ |+++.+++|++++. +.+.+.-.+ |+++.+|+||-|-|...
T Consensus 202 ~~~~l~~~l~~~G-V~i~~~~~v~~v~~----------------------~~v~~~~~~~~g~~i~~D~vv~a~G~~~ 256 (430)
T 3h28_A 202 SKRLVEDLFAERN-IDWIANVAVKAIEP----------------------DKVIYEDLNGNTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHHHHHHTT-CEEECSCEEEEECS----------------------SEEEEECTTSCEEEEECSEEEEECEEEC
T ss_pred HHHHHHHHHHHCC-CEEEeCCEEEEEeC----------------------CeEEEEecCCCceEEeeeEEEECCCCcc
Confidence 5667777777776 99999999999843 444443222 66899999999988643
No 274
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=62.37 E-value=2.8 Score=41.13 Aligned_cols=38 Identities=13% Similarity=0.086 Sum_probs=30.9
Q ss_pred CCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhc
Q 013000 330 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAV 370 (451)
Q Consensus 330 g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~ 370 (451)
+++.+.||+.|.- .+.++.-|++++...|+.|...+..
T Consensus 423 ~~l~fAG~~t~~~---~~g~v~GA~~SG~~aA~~i~~~l~~ 460 (472)
T 1b37_A 423 GRVYFTGEHTSEH---YNGYVHGAYLSGIDSAEILINCAQK 460 (472)
T ss_dssp TTEEECSGGGCTT---TTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEeecccCCC---CCCchhHHHHHHHHHHHHHHHHHHh
Confidence 6999999998752 3467888999999999998876654
No 275
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=61.05 E-value=2.7 Score=41.64 Aligned_cols=24 Identities=29% Similarity=0.303 Sum_probs=21.9
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNP 28 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~ 28 (451)
|||+++|..|++. |++|+|||+.+
T Consensus 12 ~aGl~aA~~l~~~----g~~V~liE~~~ 35 (500)
T 1onf_A 12 SGGMAAARRAARH----NAKVALVEKSR 35 (500)
T ss_dssp HHHHHHHHHHHHT----TCCEEEEESSS
T ss_pred HHHHHHHHHHHHC----CCcEEEEeCCC
Confidence 5899999999994 99999999985
No 276
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=60.39 E-value=3.8 Score=42.28 Aligned_cols=26 Identities=23% Similarity=0.432 Sum_probs=23.4
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPAL 30 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~ 30 (451)
|||+++|..|++ +|++|+|||+.+..
T Consensus 383 ~AGl~aA~~l~~----~g~~V~lie~~~~~ 408 (671)
T 1ps9_A 383 PAGLAFAINAAA----RGHQVTLFDAHSEI 408 (671)
T ss_dssp HHHHHHHHHHHT----TTCEEEEEESSSSS
T ss_pred HHHHHHHHHHHh----CCCeEEEEeCCCCC
Confidence 589999999999 49999999998765
No 277
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=57.33 E-value=8.5 Score=40.86 Aligned_cols=40 Identities=3% Similarity=-0.154 Sum_probs=32.6
Q ss_pred ceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCC------CcEEEeeEEEeecCC
Q 013000 123 QKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSD------GTSLYAKLVVGADGG 182 (451)
Q Consensus 123 v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d------g~~~~adlvVgADG~ 182 (451)
++|+++++|+.|.. .+.+|.|++.| |.++.||.||.|=-.
T Consensus 582 l~I~Lnt~V~~I~~--------------------~~~gV~V~~~~~~~~~~g~~i~AD~VIvTvPl 627 (852)
T 2xag_A 582 LDIKLNTAVRQVRY--------------------TASGCEVIAVNTRSTSQTFIYKCDAVLCTLPL 627 (852)
T ss_dssp CCEECSEEEEEEEE--------------------ETTEEEEEEEESSSTTCEEEEEESEEEECCCH
T ss_pred CCEEeCCeEEEEEE--------------------cCCcEEEEEeecccCCCCeEEECCEEEECCCH
Confidence 57999999999987 45678888765 568999999988653
No 278
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=56.57 E-value=4.1 Score=40.86 Aligned_cols=57 Identities=9% Similarity=-0.004 Sum_probs=38.8
Q ss_pred HHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCC---Cc--EE---EeeEEEee
Q 013000 108 VLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSD---GT--SL---YAKLVVGA 179 (451)
Q Consensus 108 ~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d---g~--~~---~adlvVgA 179 (451)
.-...+++.+.+.++++|+.++.|+++.. +++....|.+.+ |+ ++ .++-||-|
T Consensus 196 s~~~~~l~~~~~~~~~~i~~~~~V~~i~~-------------------~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIla 256 (546)
T 1kdg_A 196 GPVATYLQTALARPNFTFKTNVMVSNVVR-------------------NGSQILGVQTNDPTLGPNGFIPVTPKGRVILS 256 (546)
T ss_dssp HHHHTHHHHHHTCTTEEEECSCCEEEEEE-------------------ETTEEEEEEESCTTSSGGGEEEEEEEEEEEEC
T ss_pred CHHHHHHHHHhhCCCcEEEeCCEEEEEEE-------------------eCCEEEEEEEEecCCCceeEEEEEeCCEEEEc
Confidence 33444666666655699999999999976 122334566654 64 33 78999999
Q ss_pred cCCC
Q 013000 180 DGGK 183 (451)
Q Consensus 180 DG~~ 183 (451)
-|..
T Consensus 257 aG~~ 260 (546)
T 1kdg_A 257 AGAF 260 (546)
T ss_dssp SHHH
T ss_pred CChh
Confidence 9984
No 279
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=55.75 E-value=14 Score=38.03 Aligned_cols=50 Identities=14% Similarity=0.001 Sum_probs=37.2
Q ss_pred HHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCC--cEEEeeEEEeecCCCC
Q 013000 111 SSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDG--TSLYAKLVVGADGGKS 184 (451)
Q Consensus 111 ~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg--~~~~adlvVgADG~~S 184 (451)
..+.+.+++.| |+++.+++|++++. +++.+. .+| +++.+|.||-|-|...
T Consensus 577 ~~~~~~l~~~G-V~v~~~~~v~~i~~----------------------~~v~~~-~~G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 577 WIHRTTLLSRG-VKMIPGVSYQKIDD----------------------DGLHVV-INGETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp HHHHHHHHHTT-CEEECSCEEEEEET----------------------TEEEEE-ETTEEEEECCSEEEECCCEEE
T ss_pred HHHHHHHHhcC-CEEEeCcEEEEEeC----------------------CeEEEe-cCCeEEEEeCCEEEECCCccc
Confidence 34455566666 99999999999853 445554 677 5799999999999643
No 280
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=55.65 E-value=4.3 Score=37.51 Aligned_cols=29 Identities=34% Similarity=0.421 Sum_probs=24.1
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPALG 31 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~~ 31 (451)
||||++|+.|+++. .|++|+||||.+.+.
T Consensus 75 PAGlsAA~~la~~r--~G~~V~viEk~~~~G 103 (326)
T 3fpz_A 75 SSGLSAAYVIAKNR--PDLKVCIIESSVAPG 103 (326)
T ss_dssp HHHHHHHHHHHHHC--TTSCEEEECSSSSCC
T ss_pred HHHHHHHHHHHHhC--CCCeEEEEECCCCCC
Confidence 79999999997421 499999999998874
No 281
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=55.45 E-value=15 Score=36.65 Aligned_cols=42 Identities=12% Similarity=0.059 Sum_probs=32.4
Q ss_pred CCCceEEc--CCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCcEEEeeEEEeecCCCCh
Q 013000 120 TEFQKTIY--PSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 185 (451)
Q Consensus 120 ~g~v~i~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 185 (451)
.++|++.. +..|+.+.. . .|.+.||+++++|+||-|.|....
T Consensus 342 ~~nV~lv~~~~~~I~~it~----------------------~--gv~~~dG~~~~~DvIV~ATGf~~~ 385 (540)
T 3gwf_A 342 RPNVEAVAIKENPIREVTA----------------------K--GVVTEDGVLHELDVLVFATGFDAV 385 (540)
T ss_dssp STTEEEEETTTSCEEEECS----------------------S--EEEETTCCEEECSEEEECCCBSCS
T ss_pred CCCEEEEeCCCCCccEEec----------------------C--eEEcCCCCEEECCEEEECCccCcc
Confidence 35688875 667887732 2 367799999999999999998765
No 282
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=55.25 E-value=6.2 Score=39.18 Aligned_cols=59 Identities=14% Similarity=0.201 Sum_probs=37.2
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeCCCc-EEEeeEEEeecCC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGT-SLYAKLVVGADGG 182 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~-~~~adlvVgADG~ 182 (451)
......+...++...+.+|..++.|..+.. +.. +..+|.+...++. .+.++-||-|-|+
T Consensus 210 s~~~~~~~~~~~~r~nl~v~~~~~v~~i~~---------~~~--------~a~gv~~~~~~~~~~~~a~~VILsAGa 269 (526)
T 3t37_A 210 TAADAWLTKAVRGRKNLTILTGSRVRRLKL---------EGN--------QVRSLEVVGRQGSAEVFADQIVLCAGA 269 (526)
T ss_dssp CHHHHHSCHHHHTCTTEEEECSCEEEEEEE---------ETT--------EEEEEEEEETTEEEEEEEEEEEECSHH
T ss_pred ccccccccccccCCCCeEEEeCCEEEEEEe---------cCC--------eEEEEEEEecCceEEEeecceEEcccc
Confidence 344444555555556799999999999876 000 1223444444443 6788888888887
No 283
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=53.80 E-value=7.6 Score=39.11 Aligned_cols=27 Identities=19% Similarity=0.250 Sum_probs=23.6
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPAL 30 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~ 30 (451)
+||+++|..|++. .|.+|+|||+.+..
T Consensus 12 ~aG~v~A~rLse~---~~~~VlllEaG~~~ 38 (566)
T 3fim_B 12 NAGNVVAARLTED---PDVSVLVLEAGVSD 38 (566)
T ss_dssp TTHHHHHHHHTTS---TTCCEEEECSSBCC
T ss_pred HHHHHHHHHHHhC---cCCcEEEEecCCcc
Confidence 5899999999985 58999999998755
No 284
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=53.64 E-value=4.6 Score=44.03 Aligned_cols=26 Identities=15% Similarity=0.249 Sum_probs=22.9
Q ss_pred CcHHHHHHHhcCCCCCCCc-EEEEEcCCCCC
Q 013000 1 MVGMALACSLASMPLTKHL-SVAIIDSNPAL 30 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~-~V~viEr~~~~ 30 (451)
||||++|..|++. |+ +|+|||+.+.+
T Consensus 197 pAGl~aA~~L~~~----G~~~Vtv~E~~~~~ 223 (1025)
T 1gte_A 197 PASISCASFLARL----GYSDITIFEKQEYV 223 (1025)
T ss_dssp HHHHHHHHHHHHT----TCCCEEEEESSSSC
T ss_pred HHHHHHHHHHHhc----CCCcEEEEeCCCCC
Confidence 6899999999994 99 79999998654
No 285
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=53.28 E-value=19 Score=34.59 Aligned_cols=51 Identities=8% Similarity=-0.043 Sum_probs=37.4
Q ss_pred HHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEe--CC-----CcEEEeeEEEeecC
Q 013000 109 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDL--SD-----GTSLYAKLVVGADG 181 (451)
Q Consensus 109 L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~--~d-----g~~~~adlvVgADG 181 (451)
....+.+.+.+.+ |+++.+++|++++. +.+.+.. .| ++++.+|+||-|-|
T Consensus 210 ~~~~~~~~l~~~g-I~~~~~~~v~~v~~----------------------~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g 266 (437)
T 3sx6_A 210 SKGILTKGLKEEG-IEAYTNCKVTKVED----------------------NKMYVTQVDEKGETIKEMVLPVKFGMMIPA 266 (437)
T ss_dssp HHHHHHHHHHHTT-CEEECSEEEEEEET----------------------TEEEEEEECTTSCEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHCC-CEEEcCCEEEEEEC----------------------CeEEEEecccCCccccceEEEEeEEEEcCC
Confidence 5566667777776 99999999999853 3444442 34 45789999999988
Q ss_pred C
Q 013000 182 G 182 (451)
Q Consensus 182 ~ 182 (451)
.
T Consensus 267 ~ 267 (437)
T 3sx6_A 267 F 267 (437)
T ss_dssp E
T ss_pred C
Confidence 4
No 286
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=52.70 E-value=3.8 Score=40.01 Aligned_cols=23 Identities=9% Similarity=0.143 Sum_probs=20.9
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSN 27 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~ 27 (451)
|||+++|..|++ .|++|+|||+.
T Consensus 15 ~aGl~aA~~l~~----~g~~V~lie~~ 37 (458)
T 1lvl_A 15 PGGYVAAIRAGQ----LGIPTVLVEGQ 37 (458)
T ss_dssp HHHHHHHHHHHH----HTCCEEEECSS
T ss_pred HHHHHHHHHHHH----CCCEEEEEccC
Confidence 589999999999 49999999994
No 287
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=50.47 E-value=3.9 Score=42.39 Aligned_cols=38 Identities=16% Similarity=0.096 Sum_probs=29.0
Q ss_pred cCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhc
Q 013000 329 SKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAV 370 (451)
Q Consensus 329 ~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~ 370 (451)
.|||.+.||++- . ..|. +--||++|...+..|...+..
T Consensus 644 ~gri~fAGe~~S-~--~~GW-ieGAl~Sa~~Aa~~i~~~~~~ 681 (721)
T 3ayj_A 644 DNRFFIASDSYS-H--LGGW-LEGAFMSALNAVAGLIVRANR 681 (721)
T ss_dssp CCCEEECSGGGS-S--CTTS-HHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEeehhhc-c--CCce-ehHHHHHHHHHHHHHHHHhcC
Confidence 589999999994 2 2222 677899999999888876654
No 288
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=50.18 E-value=5 Score=40.69 Aligned_cols=23 Identities=22% Similarity=0.166 Sum_probs=21.0
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSN 27 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~ 27 (451)
|||+++|..|++. |++|+|||+.
T Consensus 117 pAGl~aA~~l~~~----g~~v~liE~~ 139 (598)
T 2x8g_A 117 SGGLAAGKEAAKY----GAKTAVLDYV 139 (598)
T ss_dssp HHHHHHHHHHHHT----TCCEEEECCC
T ss_pred ccHHHHHHHHHhC----CCeEEEEecc
Confidence 6899999999994 9999999984
No 289
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=47.36 E-value=9.8 Score=38.46 Aligned_cols=24 Identities=29% Similarity=0.481 Sum_probs=21.9
Q ss_pred cHHHHHHHhcCCCCCCCcEEEEEcCCC
Q 013000 2 VGMALACSLASMPLTKHLSVAIIDSNP 28 (451)
Q Consensus 2 aGl~lA~~L~~~~~~~g~~V~viEr~~ 28 (451)
||+++|..|++. .|.+|+|||+.+
T Consensus 30 AG~vlA~RLse~---~~~~VLlLEaG~ 53 (583)
T 3qvp_A 30 TGLTTAARLTEN---PNISVLVIESGS 53 (583)
T ss_dssp HHHHHHHHHTTS---TTCCEEEECSSC
T ss_pred HHHHHHHHHHhC---CCCcEEEEecCC
Confidence 799999999985 489999999998
No 290
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=46.46 E-value=6.5 Score=38.44 Aligned_cols=36 Identities=14% Similarity=0.229 Sum_probs=28.0
Q ss_pred CCEEEEcccccccCCcchhc-cccchHHHHHHHHHHHHhhhc
Q 013000 330 KRVVLIGDAAHTVHPLAGQG-VNLGFGDASTLSRIIAEGIAV 370 (451)
Q Consensus 330 g~v~LvGDAAh~~~P~~g~G-~~~al~da~~La~~L~~~~~~ 370 (451)
.+|..+||++.. | .| +..|+.+|..+|..|...+..
T Consensus 360 p~vya~Gd~~~g--~---~~~i~~a~~~g~~aa~~i~~~l~~ 396 (460)
T 1cjc_A 360 PGLYCSGWVKRG--P---TGVITTTMTDSFLTGQILLQDLKA 396 (460)
T ss_dssp TTEEECTHHHHC--T---TCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCcC--C---CccHHHHHHHHHHHHHHHHHHHHh
Confidence 689999999953 2 33 457899999999998877654
No 291
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=45.83 E-value=36 Score=33.63 Aligned_cols=61 Identities=10% Similarity=-0.065 Sum_probs=41.6
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEE--eCCCc---EEEeeEEEeecC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLD--LSDGT---SLYAKLVVGADG 181 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~--~~dg~---~~~adlvVgADG 181 (451)
.++.+.+.+.+.+.| |+++.+++++.++. ..++ .++.+.+. ..+|. ++.+|.||-|-|
T Consensus 250 ~~~~~~~~~~l~~~G-V~v~~~~~v~~v~~---------~~~~-------~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G 312 (519)
T 3qfa_A 250 QDMANKIGEHMEEHG-IKFIRQFVPIKVEQ---------IEAG-------TPGRLRVVAQSTNSEEIIEGEYNTVMLAIG 312 (519)
T ss_dssp HHHHHHHHHHHHHTT-CEEEESEEEEEEEE---------EECC-------TTCEEEEEEEESSSSCEEEEEESEEEECSC
T ss_pred HHHHHHHHHHHHHCC-CEEEeCCeEEEEEE---------ccCC-------CCceEEEEEEECCCcEEEEEECCEEEEecC
Confidence 467777777787776 99999999888854 0000 11344444 45663 568999999999
Q ss_pred CCC
Q 013000 182 GKS 184 (451)
Q Consensus 182 ~~S 184 (451)
...
T Consensus 313 ~~p 315 (519)
T 3qfa_A 313 RDA 315 (519)
T ss_dssp EEE
T ss_pred Ccc
Confidence 754
No 292
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=45.07 E-value=11 Score=37.74 Aligned_cols=25 Identities=20% Similarity=0.357 Sum_probs=22.3
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPAL 30 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~ 30 (451)
+||+++|..|++ |.+|+|||+.+..
T Consensus 36 ~AG~v~A~rLse-----g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 36 TSGCPLAATLSE-----KYKVLVLERGSLP 60 (536)
T ss_dssp TTHHHHHHHHTT-----TSCEEEECSSBCG
T ss_pred HHHHHHHHHHhc-----CCcEEEEecCCCc
Confidence 589999999998 7899999999754
No 293
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=44.39 E-value=9.4 Score=37.79 Aligned_cols=36 Identities=25% Similarity=0.326 Sum_probs=29.8
Q ss_pred cCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHh
Q 013000 329 SKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEG 367 (451)
Q Consensus 329 ~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~ 367 (451)
..+|+.+||+|..-.|-++| .|.+.|..+|+.|...
T Consensus 364 ~~~IfAiGD~a~~~~p~~a~---~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 364 SNNIFAIGDNAFAGLPPTAQ---VAHQEAEYLAKNFDKM 399 (502)
T ss_dssp CSSEEECGGGEESSSCCCHH---HHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcccCCCCCCchH---HHHHHHHHHHHHHHHH
Confidence 46899999999887776665 5888999999998765
No 294
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=44.38 E-value=34 Score=33.86 Aligned_cols=36 Identities=17% Similarity=0.181 Sum_probs=26.8
Q ss_pred CCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhh
Q 013000 330 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIA 369 (451)
Q Consensus 330 g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~ 369 (451)
.+|+.+||++.... .-+..|+.++..+|..+...+.
T Consensus 481 p~VfA~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~L~ 516 (521)
T 1hyu_A 481 KGVFAAGDCTTVPY----KQIIIATGEGAKASLSAFDYLI 516 (521)
T ss_dssp TTEEECSTTBCCSS----CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeecccCCCc----ceeeehHHhHHHHHHHHHHHHH
Confidence 58999999987532 2356788888888888876654
No 295
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=44.19 E-value=20 Score=34.92 Aligned_cols=36 Identities=11% Similarity=0.118 Sum_probs=25.3
Q ss_pred CCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhh
Q 013000 330 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIA 369 (451)
Q Consensus 330 g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~ 369 (451)
.+|+.+||++.. |. ..+..|+.+|..+|..|...+.
T Consensus 352 pgvya~GD~~~g--p~--~~i~~a~~~g~~~a~~i~~~l~ 387 (456)
T 1lqt_A 352 PNEYVVGWIKRG--PT--GVIGTNKKDAQDTVDTLIKNLG 387 (456)
T ss_dssp SSEEECTHHHHC--SC--SCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeccCCC--Cc--hhHHHHHHHHHHHHHHHHHHHH
Confidence 479999999863 21 1244688888888888876553
No 296
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=43.90 E-value=31 Score=34.44 Aligned_cols=22 Identities=14% Similarity=0.203 Sum_probs=18.8
Q ss_pred EEeCCCcEEEeeEEEeecCCCCh
Q 013000 163 LDLSDGTSLYAKLVVGADGGKSR 185 (451)
Q Consensus 163 v~~~dg~~~~adlvVgADG~~S~ 185 (451)
|.+.|| ++++|+||-|.|....
T Consensus 371 v~~~dG-~~~~D~IV~ATGf~~~ 392 (545)
T 3uox_A 371 IKTADA-AYDLDVIIYATGFDAV 392 (545)
T ss_dssp EEESSC-EEECSEEEECCCCBSS
T ss_pred EEeCCC-eeecCEEEECCccccc
Confidence 566899 9999999999998643
No 297
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=42.33 E-value=56 Score=32.81 Aligned_cols=68 Identities=16% Similarity=0.146 Sum_probs=42.2
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEE--EeCCCcEEE--eeEEEeecCC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKL--DLSDGTSLY--AKLVVGADGG 182 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v--~~~dg~~~~--adlvVgADG~ 182 (451)
..+...+.+.+.+.| ++++++++++.++...- .. ..+. ..+.+.+ .+.+|+++. +|.||-|-|.
T Consensus 326 ~~~~~~~~~~l~~~g-v~i~~~~~v~~v~~~~~---~~-~~~~-------~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~ 393 (598)
T 2x8g_A 326 QQMAEKVGDYMENHG-VKFAKLCVPDEIKQLKV---VD-TENN-------KPGLLLVKGHYTDGKKFEEEFETVIFAVGR 393 (598)
T ss_dssp HHHHHHHHHHHHHTT-CEEEETEEEEEEEEEEC---CB-TTTT-------BCCEEEEEEEETTSCEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHhCC-CEEEECCeEEEEEeccc---cc-cccC-------CCceEEEEEEeCCCcEEeccCCEEEEEeCC
Confidence 456666777777776 99999998888753000 00 0000 1234444 356887554 9999999998
Q ss_pred CChh
Q 013000 183 KSRV 186 (451)
Q Consensus 183 ~S~v 186 (451)
....
T Consensus 394 ~p~~ 397 (598)
T 2x8g_A 394 EPQL 397 (598)
T ss_dssp EECG
T ss_pred cccc
Confidence 6543
No 298
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=40.97 E-value=9.1 Score=37.87 Aligned_cols=56 Identities=11% Similarity=0.131 Sum_probs=36.8
Q ss_pred HHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeC--CC-----cEEEeeEEEeecCCC
Q 013000 111 SSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS--DG-----TSLYAKLVVGADGGK 183 (451)
Q Consensus 111 ~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--dg-----~~~~adlvVgADG~~ 183 (451)
..++..+.+.++++|+.+++|+.+..+ .+ ....+.|.+. +| .++.|+-||-|-|..
T Consensus 225 ~~~l~~a~~~~n~~i~~~~~V~~i~~~---------~~--------g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~ 287 (504)
T 1n4w_A 225 KTYLAAALGTGKVTIQTLHQVKTIRQT---------KD--------GGYALTVEQKDTDGKLLATKEISCRYLFLGAGSL 287 (504)
T ss_dssp TTHHHHHHHTTSEEEEESEEEEEEEEC---------TT--------SSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHH
T ss_pred HHHHHHHHhcCCcEEEeCCEEEEEEEC---------CC--------CCEEEEEEEeCCCCccceeEEEeeCEEEEccCCC
Confidence 344455555667999999999999871 00 1124556553 66 268888888887774
No 299
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=40.91 E-value=15 Score=37.09 Aligned_cols=25 Identities=24% Similarity=0.359 Sum_probs=21.9
Q ss_pred cHHHHHHHhcCCCCCCCcEEEEEcCCCC
Q 013000 2 VGMALACSLASMPLTKHLSVAIIDSNPA 29 (451)
Q Consensus 2 aGl~lA~~L~~~~~~~g~~V~viEr~~~ 29 (451)
||+++|..|++. .+.+|+|||+.+.
T Consensus 17 AG~v~A~rLse~---~~~~VLllEaG~~ 41 (577)
T 3q9t_A 17 AGNTVAGRLAEN---PNVTVLIVEAGIG 41 (577)
T ss_dssp HHHHHHHHHTTS---TTSCEEEECSSCS
T ss_pred HHHHHHHHHHhC---CCCcEEEEecCCC
Confidence 799999999996 2489999999876
No 300
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=39.98 E-value=41 Score=33.39 Aligned_cols=26 Identities=15% Similarity=0.120 Sum_probs=22.9
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPAL 30 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~ 30 (451)
++|+++|..|++ .|++|+|||+....
T Consensus 17 ~aG~~~A~~L~~----~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 17 PGGIIAADRLSE----AGKKVLLLERGGPS 42 (546)
T ss_dssp HHHHHHHHHHHH----TTCCEEEECSSCCC
T ss_pred HHHHHHHHHHHh----CCCeEEEEeCCCCC
Confidence 489999999999 49999999998754
No 301
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=39.38 E-value=13 Score=37.65 Aligned_cols=27 Identities=19% Similarity=0.332 Sum_probs=23.4
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPAL 30 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~ 30 (451)
++|+++|..|++. .|.+|+|||+....
T Consensus 34 ~~g~~~a~~l~~~---~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 34 LTGLTVAAKLTEN---PKIKVLVIEKGFYE 60 (587)
T ss_dssp HHHHHHHHHHHTS---TTCCEEEEESSCCC
T ss_pred HHHHHHHHHHHhC---CCCcEEEEecCCcc
Confidence 4799999999994 49999999999765
No 302
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=39.08 E-value=16 Score=36.12 Aligned_cols=25 Identities=8% Similarity=0.060 Sum_probs=22.2
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPA 29 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~ 29 (451)
++|+++|..|++ .|.+|+|||+...
T Consensus 15 ~~g~~~a~~l~~----~~~~v~~~e~~~~ 39 (504)
T 1n4w_A 15 YGAAVSALRLGE----AGVQTLMLEMGQL 39 (504)
T ss_dssp HHHHHHHHHHHH----TTCCEEEEESSCC
T ss_pred HHHHHHHHHHHh----CCCcEEEEeCCCC
Confidence 479999999999 4999999999874
No 303
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=38.73 E-value=32 Score=33.47 Aligned_cols=26 Identities=23% Similarity=0.179 Sum_probs=23.0
Q ss_pred CcHHHHHHHhcCCCCCCC--cEEEEEcCCCCC
Q 013000 1 MVGMALACSLASMPLTKH--LSVAIIDSNPAL 30 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g--~~V~viEr~~~~ 30 (451)
|||+.+|..|++. | ++|+|||+.+.+
T Consensus 16 ~aGl~aA~~l~~~----g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 16 PAGFYTAQHLLKH----HSRAHVDIYEKQLVP 43 (460)
T ss_dssp HHHHHHHHHHHHH----CSSCEEEEECSSSSS
T ss_pred HHHHHHHHHHHhc----CCCCCEEEEeCCCcC
Confidence 5899999999984 6 999999999765
No 304
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=38.36 E-value=45 Score=32.58 Aligned_cols=26 Identities=15% Similarity=0.212 Sum_probs=23.1
Q ss_pred CcHHHHHHHhcCCCCCCC-cEEEEEcCCCCC
Q 013000 1 MVGMALACSLASMPLTKH-LSVAIIDSNPAL 30 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g-~~V~viEr~~~~ 30 (451)
|+||++|+.|++. | .+|+|+|+++.+
T Consensus 19 ~~Gl~~A~~l~~~----g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 19 PTGLGAAVRLTEL----GYKNWHLYECNDTP 45 (484)
T ss_dssp HHHHHHHHHHHHT----TCCSEEEEESSSSS
T ss_pred HHHHHHHHHHHHc----CCCCEEEEeCCCCC
Confidence 5899999999994 7 799999999876
No 305
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=38.07 E-value=15 Score=36.71 Aligned_cols=59 Identities=19% Similarity=0.194 Sum_probs=38.7
Q ss_pred HHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccC-CCeeEEEeCC---Cc--EEEee-EEEeec
Q 013000 108 VLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTK-GHLAKLDLSD---GT--SLYAK-LVVGAD 180 (451)
Q Consensus 108 ~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~~~d---g~--~~~ad-lvVgAD 180 (451)
.....++..+.+..+++|+.++.|+.+.. ++ +..+.|.+.+ |+ ++.|+ .||-|-
T Consensus 209 s~~~a~l~~a~~~~~~~i~~~~~V~~i~~-------------------~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaa 269 (546)
T 2jbv_A 209 SSSVSYIHPIVEQENFTLLTGLRARQLVF-------------------DADRRCTGVDIVDSAFGHTHRLTARNEVVLST 269 (546)
T ss_dssp CHHHHHTGGGTTCTTEEEECSCEEEEEEE-------------------CTTSBEEEEEEESSTTSCEEEEEEEEEEEECS
T ss_pred CHHHHHHHHHhcCCCcEEEeCCEEEEEEE-------------------CCCCeEEEEEEEECCCCcEEEEEeCccEEEec
Confidence 34445555555445699999999999986 11 2334455533 54 68898 888888
Q ss_pred CC-CCh
Q 013000 181 GG-KSR 185 (451)
Q Consensus 181 G~-~S~ 185 (451)
|. +|+
T Consensus 270 G~~~sp 275 (546)
T 2jbv_A 270 GAIDTP 275 (546)
T ss_dssp HHHHHH
T ss_pred CccCCc
Confidence 87 443
No 306
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=36.18 E-value=11 Score=36.66 Aligned_cols=30 Identities=17% Similarity=0.155 Sum_probs=23.0
Q ss_pred CcHHHHHHHhcC-CC--CCCCcEEEEEcCCCCC
Q 013000 1 MVGMALACSLAS-MP--LTKHLSVAIIDSNPAL 30 (451)
Q Consensus 1 paGl~lA~~L~~-~~--~~~g~~V~viEr~~~~ 30 (451)
|||+++|..|++ .. ...|++|+|||+.+.+
T Consensus 13 ~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 13 PSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp HHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred HHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 689999999987 31 0017999999999765
No 307
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=36.11 E-value=12 Score=36.92 Aligned_cols=59 Identities=20% Similarity=0.141 Sum_probs=38.5
Q ss_pred hHHHHHHHHHHhhcCCCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccC-C-CeeEEEeC--CC-----cEEEeeEE
Q 013000 106 NKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTK-G-HLAKLDLS--DG-----TSLYAKLV 176 (451)
Q Consensus 106 R~~L~~~L~~~~~~~g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~v~v~~~--dg-----~~~~adlv 176 (451)
|......++..+.+.++++|+.+++|+.|.. ++ + ..+.|.+. +| .++.|+-|
T Consensus 225 R~s~~~~~l~~a~~~~n~~i~~~~~v~~i~~-------------------~~~g~~~~gV~~~~~~g~~~~~~~~~A~~V 285 (507)
T 1coy_A 225 KKSLDKTYLAQAAATGKLTITTLHRVTKVAP-------------------ATGSGYSVTMEQIDEQGNVVATKVVTADRV 285 (507)
T ss_dssp BCCTTTTHHHHHHHTTCEEEECSEEEEEEEE-------------------CSSSSEEEEEEEECTTSCEEEEEEEEEEEE
T ss_pred CcChHHHHHHHHHhcCCcEEEeCCEEEEEEE-------------------CCCCCEEEEEEEeCCCCcccccEEEEeCEE
Confidence 3333344455555566799999999999987 11 1 24456553 56 26888888
Q ss_pred EeecCCC
Q 013000 177 VGADGGK 183 (451)
Q Consensus 177 VgADG~~ 183 (451)
|-|-|..
T Consensus 286 IlaaGa~ 292 (507)
T 1coy_A 286 FFAAGSV 292 (507)
T ss_dssp EECSHHH
T ss_pred EEccCcc
Confidence 8777774
No 308
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=34.86 E-value=21 Score=35.28 Aligned_cols=25 Identities=16% Similarity=0.228 Sum_probs=22.1
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPA 29 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~ 29 (451)
++|+++|..|++ .|.+|+|||+...
T Consensus 21 ~~g~~~a~~l~~----~~~~v~~~e~~~~ 45 (507)
T 1coy_A 21 YGGAVAALRLTQ----AGIPTQIVEMGRS 45 (507)
T ss_dssp HHHHHHHHHHHH----TTCCEEEECSSCC
T ss_pred HHHHHHHHHHHH----CCCcEEEEECCCC
Confidence 479999999999 4999999999864
No 309
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=33.93 E-value=49 Score=33.00 Aligned_cols=26 Identities=15% Similarity=0.318 Sum_probs=22.7
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPAL 30 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~ 30 (451)
+||+++|+.|++ .|++|+|||+++..
T Consensus 31 ~aGl~aA~~L~~----~G~~v~iiE~~~~~ 56 (549)
T 4ap3_A 31 IAGLYAIHRFRS----QGLTVRAFEAASGV 56 (549)
T ss_dssp HHHHHHHHHHHH----TTCCEEEECSSSSS
T ss_pred HHHHHHHHHHHh----CCCCEEEEeCCCCC
Confidence 489999999999 49999999997654
No 310
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=32.35 E-value=48 Score=32.97 Aligned_cols=27 Identities=30% Similarity=0.441 Sum_probs=23.2
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPAL 30 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~ 30 (451)
++|+++|..|++. .|.+|+|||+....
T Consensus 23 ~~G~~~a~~l~~~---~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 23 SAGAAVAARLSED---PAVSVALVEAGPDD 49 (546)
T ss_dssp HHHHHHHHHHTTS---TTSCEEEECSSCCC
T ss_pred HHHHHHHHHHHhC---CCCCEEEEecCCcC
Confidence 3799999999994 38999999999765
No 311
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=32.12 E-value=33 Score=33.26 Aligned_cols=24 Identities=33% Similarity=0.266 Sum_probs=21.5
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNP 28 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~ 28 (451)
.+|+++|..|.+ +|++|++.|++.
T Consensus 19 ~sG~s~A~~l~~----~G~~V~~~D~~~ 42 (451)
T 3lk7_A 19 RSGEAAARLLAK----LGAIVTVNDGKP 42 (451)
T ss_dssp TTHHHHHHHHHH----TTCEEEEEESSC
T ss_pred HHHHHHHHHHHh----CCCEEEEEeCCc
Confidence 479999999999 599999999976
No 312
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=30.41 E-value=40 Score=34.94 Aligned_cols=25 Identities=0% Similarity=0.040 Sum_probs=18.9
Q ss_pred HHHHHHhhcCCCceEEcCCeeEEEEe
Q 013000 111 SSLLSCMQNTEFQKTIYPSRLTSMAL 136 (451)
Q Consensus 111 ~~L~~~~~~~g~v~i~~~~~v~~~~~ 136 (451)
..+.+.+++.| |+++++++|+++..
T Consensus 575 ~~~~~~l~~~G-V~i~~~~~v~~i~~ 599 (729)
T 1o94_A 575 PNMMRRLHELH-VEELGDHFCSRIEP 599 (729)
T ss_dssp HHHHHHHHHTT-CEEECSEEEEEEET
T ss_pred HHHHHHHHhCC-CEEEcCcEEEEEEC
Confidence 34556666666 99999999999853
No 313
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=29.54 E-value=21 Score=28.08 Aligned_cols=24 Identities=21% Similarity=0.423 Sum_probs=20.7
Q ss_pred cHHHHHHHhcCCCCCCCcEEEEEcCCCC
Q 013000 2 VGMALACSLASMPLTKHLSVAIIDSNPA 29 (451)
Q Consensus 2 aGl~lA~~L~~~~~~~g~~V~viEr~~~ 29 (451)
.|..+|..|.+ .|++|+++|+++.
T Consensus 18 ~G~~la~~L~~----~g~~v~vid~~~~ 41 (140)
T 3fwz_A 18 VGSLLGEKLLA----SDIPLVVIETSRT 41 (140)
T ss_dssp HHHHHHHHHHH----TTCCEEEEESCHH
T ss_pred HHHHHHHHHHH----CCCCEEEEECCHH
Confidence 37889999998 4999999999875
No 314
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=28.63 E-value=22 Score=27.79 Aligned_cols=24 Identities=21% Similarity=0.313 Sum_probs=20.3
Q ss_pred cHHHHHHHhcCCCCCCCcEEEEEcCCCC
Q 013000 2 VGMALACSLASMPLTKHLSVAIIDSNPA 29 (451)
Q Consensus 2 aGl~lA~~L~~~~~~~g~~V~viEr~~~ 29 (451)
.|..+|..|.+ +|++|+++|+++.
T Consensus 17 iG~~la~~L~~----~g~~V~~id~~~~ 40 (141)
T 3llv_A 17 AGVGLVRELTA----AGKKVLAVDKSKE 40 (141)
T ss_dssp HHHHHHHHHHH----TTCCEEEEESCHH
T ss_pred HHHHHHHHHHH----CCCeEEEEECCHH
Confidence 37889999998 4999999999764
No 315
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=27.90 E-value=33 Score=35.48 Aligned_cols=60 Identities=18% Similarity=-0.022 Sum_probs=37.1
Q ss_pred HHHHHHHHHHhhcCCCceEEcCCeeE--EEEeCCCCCCcccCCCCCccccccCCCeeEE-EeCCCc--EEEeeEEEeecC
Q 013000 107 KVLHSSLLSCMQNTEFQKTIYPSRLT--SMALLPSSSSISVDSTPSATTLFTKGHLAKL-DLSDGT--SLYAKLVVGADG 181 (451)
Q Consensus 107 ~~L~~~L~~~~~~~g~v~i~~~~~v~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v-~~~dg~--~~~adlvVgADG 181 (451)
..|-+.|.+.+.+ + ..|+++++|+ .|.++.... + .....|+| ...+|+ ++.||.||.|--
T Consensus 347 ~~L~~aLa~~l~~-g-~~I~l~~~V~~~~I~~~~~g~------~-------~~~~~V~V~~~~~G~~~~~~aD~VIvTvP 411 (721)
T 3ayj_A 347 VEFIRNLFLKAQN-V-GAGKLVVQVRQERVANACHSG------T-------ASARAQLLSYDSHNAVHSEAYDFVILAVP 411 (721)
T ss_dssp HHHHHHHHHHHHH-H-TTTSEEEEEECEEEEEEEECS------S-------SSCCEEEEEEETTCCEEEEEESEEEECSC
T ss_pred HHHHHHHHHhccc-C-CceEeCCEEEeeeEEECCCCC------c-------cccceEEEEEecCCceEEEEcCEEEECCC
Confidence 5666777777632 2 3577899999 997610000 0 01134888 446777 799999998654
No 316
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=24.79 E-value=36 Score=27.12 Aligned_cols=25 Identities=28% Similarity=0.303 Sum_probs=20.7
Q ss_pred cHHHHHHHhcCCCCCCCcEEEEEcCCCCC
Q 013000 2 VGMALACSLASMPLTKHLSVAIIDSNPAL 30 (451)
Q Consensus 2 aGl~lA~~L~~~~~~~g~~V~viEr~~~~ 30 (451)
.|..+|..|.+ .|++|+++|+++..
T Consensus 30 iG~~la~~L~~----~g~~V~vid~~~~~ 54 (155)
T 2g1u_A 30 LGSLIANLASS----SGHSVVVVDKNEYA 54 (155)
T ss_dssp HHHHHHHHHHH----TTCEEEEEESCGGG
T ss_pred HHHHHHHHHHh----CCCeEEEEECCHHH
Confidence 47889999988 49999999998653
No 317
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=24.53 E-value=73 Score=25.71 Aligned_cols=38 Identities=18% Similarity=0.142 Sum_probs=28.8
Q ss_pred cCCEEEEcccccccCCcchhccccchHHHHHHHHHHHHhhhc
Q 013000 329 SKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAV 370 (451)
Q Consensus 329 ~g~v~LvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~ 370 (451)
..+|+.+||++....| -+..|+.++..+|..|...++.
T Consensus 135 ~~~i~a~GD~~~~~~~----~~~~A~~~g~~aa~~i~~~~~~ 172 (180)
T 2ywl_A 135 YPRVYAAGVARGKVPG----HAIISAGDGAYVAVHLVSDLRG 172 (180)
T ss_dssp STTEEECGGGGTCCSC----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEeecccCcchh----hHHHHHHhHHHHHHHHHHHhhh
Confidence 4689999999987554 3456888888888888776553
No 318
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=24.41 E-value=1.1e+02 Score=30.06 Aligned_cols=26 Identities=19% Similarity=0.299 Sum_probs=23.1
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPAL 30 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~ 30 (451)
|+|+++|+.|++. |++|+|||+.+..
T Consensus 26 ~aGl~aA~~L~~~----G~~v~iiE~~~~~ 51 (542)
T 1w4x_A 26 FSGLYALYRLREL----GRSVHVIETAGDV 51 (542)
T ss_dssp HHHHHHHHHHHHT----TCCEEEECSSSSS
T ss_pred HHHHHHHHHHHhC----CCCEEEEeCCCCC
Confidence 5899999999994 9999999998754
No 319
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=23.49 E-value=42 Score=32.48 Aligned_cols=25 Identities=16% Similarity=0.323 Sum_probs=22.1
Q ss_pred cHHHHHHHhcCCCCCCCcEEEEEcCCCCC
Q 013000 2 VGMALACSLASMPLTKHLSVAIIDSNPAL 30 (451)
Q Consensus 2 aGl~lA~~L~~~~~~~g~~V~viEr~~~~ 30 (451)
.|+.+|..|+++ |++|+++|+++..
T Consensus 19 vG~~~A~~La~~----G~~V~~~D~~~~k 43 (446)
T 4a7p_A 19 VGLVSGACFSDF----GHEVVCVDKDARK 43 (446)
T ss_dssp HHHHHHHHHHHT----TCEEEEECSCSTT
T ss_pred HHHHHHHHHHHC----CCEEEEEeCCHHH
Confidence 489999999994 9999999999864
No 320
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=23.02 E-value=70 Score=34.43 Aligned_cols=26 Identities=19% Similarity=0.217 Sum_probs=23.5
Q ss_pred CcHHHHHHHhcCCCCCCCcEEEEEcCCCCC
Q 013000 1 MVGMALACSLASMPLTKHLSVAIIDSNPAL 30 (451)
Q Consensus 1 paGl~lA~~L~~~~~~~g~~V~viEr~~~~ 30 (451)
|||+++|+.|++. |++|+|||+.+.+
T Consensus 138 pAGl~AA~~la~~----G~~V~lie~~~~~ 163 (965)
T 2gag_A 138 PAGLAAAREASRS----GARVMLLDERAEA 163 (965)
T ss_dssp HHHHHHHHHHHHT----TCCEEEECSSSSS
T ss_pred HHHHHHHHHHHhC----CCcEEEEeCCCCC
Confidence 6899999999994 9999999998765
No 321
>3nk4_C ZONA pellucida 3; fertilization, oocyte, egg coat, vitelline E ZP domain, ZP module, egg-sperm interaction, species-specif recognition, speciation; HET: A2G FLC; 2.00A {Gallus gallus} PDB: 3nk3_C*
Probab=22.19 E-value=46 Score=17.65 Aligned_cols=11 Identities=36% Similarity=0.736 Sum_probs=7.1
Q ss_pred CcEEEeeEEEe
Q 013000 168 GTSLYAKLVVG 178 (451)
Q Consensus 168 g~~~~adlvVg 178 (451)
|+++-+|+|||
T Consensus 7 gkevaadvvig 17 (30)
T 3nk4_C 7 GKEVAADVVIG 17 (30)
T ss_dssp --CEEEEEEEE
T ss_pred ccceecceEEe
Confidence 56677888886
No 322
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=21.84 E-value=30 Score=35.28 Aligned_cols=25 Identities=16% Similarity=0.093 Sum_probs=22.4
Q ss_pred cHHHHHHHhcCCCCCCCcEEEEEcCCCCC
Q 013000 2 VGMALACSLASMPLTKHLSVAIIDSNPAL 30 (451)
Q Consensus 2 aGl~lA~~L~~~~~~~g~~V~viEr~~~~ 30 (451)
.|..+|..|++ +|.+|++|||++..
T Consensus 19 ~~~~~a~~~~~----~g~~vl~id~~~~~ 43 (650)
T 1vg0_A 19 PESIIAAACSR----SGQRVLHVDSRSYY 43 (650)
T ss_dssp HHHHHHHHHHH----TTCCEEEECSSSSS
T ss_pred HHHHHHHHHHh----CCCEEEEEcCCCcc
Confidence 47789999999 59999999999987
No 323
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=21.43 E-value=38 Score=32.62 Aligned_cols=25 Identities=20% Similarity=0.268 Sum_probs=22.0
Q ss_pred cHHHHHHHhcCCCCCCCcEEEEEcCCCCC
Q 013000 2 VGMALACSLASMPLTKHLSVAIIDSNPAL 30 (451)
Q Consensus 2 aGl~lA~~L~~~~~~~g~~V~viEr~~~~ 30 (451)
.|+.+|..|+++ |++|+++|+++..
T Consensus 22 vGlp~A~~La~~----G~~V~~~D~~~~k 46 (431)
T 3ojo_A 22 IGLPTSIMFAKH----GVDVLGVDINQQT 46 (431)
T ss_dssp THHHHHHHHHHT----TCEEEEECSCHHH
T ss_pred HHHHHHHHHHHC----CCEEEEEECCHHH
Confidence 489999999994 9999999999754
No 324
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=21.24 E-value=52 Score=25.16 Aligned_cols=24 Identities=38% Similarity=0.502 Sum_probs=19.7
Q ss_pred cHHHHHHHhcCCCCCCCcEEEEEcCCCC
Q 013000 2 VGMALACSLASMPLTKHLSVAIIDSNPA 29 (451)
Q Consensus 2 aGl~lA~~L~~~~~~~g~~V~viEr~~~ 29 (451)
.|..+|..|.+ .|++|+++|+++.
T Consensus 15 iG~~~a~~L~~----~g~~v~~~d~~~~ 38 (140)
T 1lss_A 15 VGYTLAKSLSE----KGHDIVLIDIDKD 38 (140)
T ss_dssp HHHHHHHHHHH----TTCEEEEEESCHH
T ss_pred HHHHHHHHHHh----CCCeEEEEECCHH
Confidence 37888999988 4999999998753
No 325
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=21.11 E-value=84 Score=30.35 Aligned_cols=26 Identities=15% Similarity=0.141 Sum_probs=23.0
Q ss_pred CcHHHHHHHhcC---CCCCCCcE---EEEEcCCCCC
Q 013000 1 MVGMALACSLAS---MPLTKHLS---VAIIDSNPAL 30 (451)
Q Consensus 1 paGl~lA~~L~~---~~~~~g~~---V~viEr~~~~ 30 (451)
||||++|..|++ . |++ |+|||+.+.+
T Consensus 12 ~aGl~aA~~L~~~~~~----G~~~~~V~v~E~~~~~ 43 (464)
T 2xve_A 12 PSGMAQLRAFQSAQEK----GAEIPELVCFEKQADW 43 (464)
T ss_dssp HHHHHHHHHHHHHHHT----TCCCCEEEEECSSSSS
T ss_pred HHHHHHHHHHHhhhhc----CCCCCcEEEEEcCCCC
Confidence 589999999998 7 888 9999998764
No 326
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=20.08 E-value=53 Score=33.30 Aligned_cols=53 Identities=13% Similarity=0.155 Sum_probs=35.6
Q ss_pred CCceEEcCCeeEEEEeCCCCCCcccCCCCCccccccCCCeeEEEeC---CCc--EEEeeEEEeecCCCChhhhhh
Q 013000 121 EFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS---DGT--SLYAKLVVGADGGKSRVRELA 190 (451)
Q Consensus 121 g~v~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg~--~~~adlvVgADG~~S~vR~~l 190 (451)
.+++|+.++.|+++.. +.+ ......|.+. +|+ ++.||.||.|-|.....+-.+
T Consensus 273 ~nv~v~~~~~V~~i~~---------~~~--------~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~ 330 (623)
T 3pl8_A 273 ERFNLFPAVACERVVR---------NAL--------NSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLV 330 (623)
T ss_dssp EEEEEECSEEEEEEEE---------CTT--------SSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHH
T ss_pred CCEEEEeCCEEEEEEE---------ECC--------CCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHH
Confidence 3599999999999976 100 1122344443 465 688999999999866655433
Done!