BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013004
(451 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 311 bits (796), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 147/178 (82%), Positives = 160/178 (89%)
Query: 262 RRTRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLA 321
RR +P + FFDVPAE+D E+ LGQLKRFSLRELQVA+D FSNKNILGRGGFGKVYKGRLA
Sbjct: 1 RRKKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA 60
Query: 322 DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNG 381
DG LVAVKRLKEER GGELQFQTEV++ISMAVHRNLLRL GFC T TE+LLVYPYM NG
Sbjct: 61 DGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG 120
Query: 382 SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
SVAS LRER S PPLDWP R++IALGSARGL+YLH+HCDPKIIHRDVKAANILLDE+
Sbjct: 121 SVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE 178
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 303 bits (777), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 144/170 (84%), Positives = 155/170 (91%)
Query: 270 FFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVK 329
FFDVPAE+D E+ LGQLKRFSLRELQVA+D F NKNILGRGGFGKVYKGRLADG LVAVK
Sbjct: 1 FFDVPAEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVK 60
Query: 330 RLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRE 389
RLKEERT GGELQFQTEV++ISMAVHRNLLRL GFC T TE+LLVYPYM NGSVAS LRE
Sbjct: 61 RLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE 120
Query: 390 RQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
R S PPLDWP R++IALGSARGL+YLH+HCDPKIIHRDVKAANILLDE+
Sbjct: 121 RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE 170
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 93/152 (61%), Gaps = 4/152 (2%)
Query: 288 RFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEV 347
R L +L+ AT+ F +K ++G G FGKVYKG L DG VA+KR E +S G +F+TE+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE-SSQGIEEFETEI 86
Query: 348 KIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIAL 407
+ +S H +L+ L GFC E +L+Y YM NG++ L + W R +I +
Sbjct: 87 ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 408 GSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
G+ARGL YLH IIHRDVK+ NILLDE+
Sbjct: 147 GAARGLHYLHTRA---IIHRDVKSINILLDEN 175
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 93/152 (61%), Gaps = 4/152 (2%)
Query: 288 RFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEV 347
R L +L+ AT+ F +K ++G G FGKVYKG L DG VA+KR E +S G +F+TE+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE-SSQGIEEFETEI 86
Query: 348 KIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIAL 407
+ +S H +L+ L GFC E +L+Y YM NG++ L + W R +I +
Sbjct: 87 ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 408 GSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
G+ARGL YLH IIHRDVK+ NILLDE+
Sbjct: 147 GAARGLHYLHTRA---IIHRDVKSINILLDEN 175
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 96/168 (57%), Gaps = 14/168 (8%)
Query: 280 ELQLGQLKRFSLRELQVATDGFSNK------NILGRGGFGKVYKGRLADGKLVAVKRLK- 332
E+ + FS EL+ T+ F + N +G GGFG VYKG + + VAVK+L
Sbjct: 6 EVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAA 64
Query: 333 --EERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRER 390
+ T + QF E+K+++ H NL+ L GF + + LVY YM NGS+ RL
Sbjct: 65 MVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL 124
Query: 391 QSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE 438
+ PPL W R KIA G+A G+++LHE+ IHRD+K+ANILLDE
Sbjct: 125 DGT-PPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDE 168
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 96/168 (57%), Gaps = 14/168 (8%)
Query: 280 ELQLGQLKRFSLRELQVATDGFSNK------NILGRGGFGKVYKGRLADGKLVAVKRLK- 332
E+ + FS EL+ T+ F + N +G GGFG VYKG + + VAVK+L
Sbjct: 6 EVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAA 64
Query: 333 --EERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRER 390
+ T + QF E+K+++ H NL+ L GF + + LVY YM NGS+ RL
Sbjct: 65 MVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL 124
Query: 391 QSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE 438
+ PPL W R KIA G+A G+++LHE+ IHRD+K+ANILLDE
Sbjct: 125 DGT-PPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDE 168
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 93/159 (58%), Gaps = 14/159 (8%)
Query: 289 FSLRELQVATDGFSNK------NILGRGGFGKVYKGRLADGKLVAVKRLK---EERTSGG 339
FS EL+ T+ F + N +G GGFG VYKG + + VAVK+L + T
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 340 ELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDW 399
+ QF E+K+++ H NL+ L GF + + LVY YM NGS+ RL + PPL W
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT-PPLSW 126
Query: 400 PTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE 438
R KIA G+A G+++LHE+ IHRD+K+ANILLDE
Sbjct: 127 HMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDE 162
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 90/159 (56%), Gaps = 14/159 (8%)
Query: 289 FSLRELQVATDGFSNK------NILGRGGFGKVYKGRLADGKLVAVKRLK---EERTSGG 339
FS EL+ T+ F + N G GGFG VYKG + + VAVK+L + T
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 340 ELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDW 399
+ QF E+K+ + H NL+ L GF + + LVY Y NGS+ RL + PPL W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGT-PPLSW 123
Query: 400 PTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE 438
R KIA G+A G+++LHE+ IHRD+K+ANILLDE
Sbjct: 124 HXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDE 159
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 80/150 (53%), Gaps = 16/150 (10%)
Query: 307 LGRGGFGKVYKGRLA-DGKLVAVKRL----KEERTSGGE--LQFQTEVKIISMAVHRNLL 359
+G+GGFG V+KGRL D +VA+K L E T E +FQ EV I+S H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH 419
+LYG +V ++ G + RL ++ P+ W + ++ L A G+ Y+
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH---PIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 420 CDPKIIHRDVKAANIL---LDEDADQSSKT 446
+P I+HRD+++ NI LDE+A +K
Sbjct: 142 -NPPIVHRDLRSPNIFLQSLDENAPVCAKV 170
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 80/150 (53%), Gaps = 16/150 (10%)
Query: 307 LGRGGFGKVYKGRLA-DGKLVAVKRL----KEERTSGGE--LQFQTEVKIISMAVHRNLL 359
+G+GGFG V+KGRL D +VA+K L E T E +FQ EV I+S H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH 419
+LYG +V ++ G + RL ++ P+ W + ++ L A G+ Y+
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH---PIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 420 CDPKIIHRDVKAANIL---LDEDADQSSKT 446
+P I+HRD+++ NI LDE+A +K
Sbjct: 142 -NPPIVHRDLRSPNIFLQSLDENAPVCAKV 170
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 80/150 (53%), Gaps = 16/150 (10%)
Query: 307 LGRGGFGKVYKGRLA-DGKLVAVKRL----KEERTSGGE--LQFQTEVKIISMAVHRNLL 359
+G+GGFG V+KGRL D +VA+K L E T E +FQ EV I+S H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH 419
+LYG +V ++ G + RL ++ P+ W + ++ L A G+ Y+
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH---PIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 420 CDPKIIHRDVKAANIL---LDEDADQSSKT 446
+P I+HRD+++ NI LDE+A +K
Sbjct: 142 -NPPIVHRDLRSPNIFLQSLDENAPVCAKV 170
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 79/153 (51%), Gaps = 18/153 (11%)
Query: 304 KNILGRGGFGKVYKGRLADGKLVAVKRLK---EERTSGGELQFQTEVKIISMAVHRNLLR 360
+ I+G GGFGKVY+ G VAVK + +E S + E K+ +M H N++
Sbjct: 12 EEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARGLSYLH 417
L G C LV + G + L ++ +PP ++W A+ ARG++YLH
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPLNRVLSGKR--IPPDILVNW------AVQIARGMNYLH 122
Query: 418 EHCDPKIIHRDVKAANILL---DEDADQSSKTI 447
+ IIHRD+K++NIL+ E+ D S+K +
Sbjct: 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKIL 155
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 70/142 (49%), Gaps = 17/142 (11%)
Query: 305 NILGRGGFGKVYKGRLAD--GKLV--AVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
++GRG FG VY G L D GK + AVK L G QF TE I+ H N+L
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 361 LYGFC-TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYL 416
L G C + L+V PYM +G + + +R + PT K + L A+G+ YL
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL 168
Query: 417 HEHCDPKIIHRDVKAANILLDE 438
K +HRD+ A N +LDE
Sbjct: 169 ---ASKKFVHRDLAARNCMLDE 187
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 66/133 (49%), Gaps = 7/133 (5%)
Query: 307 LGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFC 365
+GRG FG+V+ GRL AD LVAVK +E + +F E +I+ H N++RL G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 366 TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKII 425
T +V + G + LR + L T ++ +A G+ YL C I
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGAR---LRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 426 HRDVKAANILLDE 438
HRD+ A N L+ E
Sbjct: 236 HRDLAARNCLVTE 248
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 70/142 (49%), Gaps = 17/142 (11%)
Query: 305 NILGRGGFGKVYKGRLAD--GKLV--AVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
++GRG FG VY G L D GK + AVK L G QF TE I+ H N+L
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 361 LYGFC-TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYL 416
L G C + L+V PYM +G + + +R + PT K + L A+G+ YL
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL 148
Query: 417 HEHCDPKIIHRDVKAANILLDE 438
K +HRD+ A N +LDE
Sbjct: 149 ---ASKKFVHRDLAARNCMLDE 167
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 70/142 (49%), Gaps = 17/142 (11%)
Query: 305 NILGRGGFGKVYKGRLAD--GKLV--AVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
++GRG FG VY G L D GK + AVK L G QF TE I+ H N+L
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 361 LYGFC-TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYL 416
L G C + L+V PYM +G + + +R + PT K + L A+G+ YL
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL 167
Query: 417 HEHCDPKIIHRDVKAANILLDE 438
K +HRD+ A N +LDE
Sbjct: 168 ---ASKKFVHRDLAARNCMLDE 186
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 66/133 (49%), Gaps = 7/133 (5%)
Query: 307 LGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFC 365
+GRG FG+V+ GRL AD LVAVK +E + +F E +I+ H N++RL G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 366 TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKII 425
T +V + G + LR + L T ++ +A G+ YL C I
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGAR---LRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 426 HRDVKAANILLDE 438
HRD+ A N L+ E
Sbjct: 236 HRDLAARNCLVTE 248
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 70/142 (49%), Gaps = 17/142 (11%)
Query: 305 NILGRGGFGKVYKGRLAD--GKLV--AVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
++GRG FG VY G L D GK + AVK L G QF TE I+ H N+L
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 361 LYGFC-TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYL 416
L G C + L+V PYM +G + + +R + PT K + L A+G+ YL
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL 146
Query: 417 HEHCDPKIIHRDVKAANILLDE 438
K +HRD+ A N +LDE
Sbjct: 147 ---ASKKFVHRDLAARNCMLDE 165
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 70/142 (49%), Gaps = 17/142 (11%)
Query: 305 NILGRGGFGKVYKGRLAD--GKLV--AVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
++GRG FG VY G L D GK + AVK L G QF TE I+ H N+L
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 361 LYGFC-TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYL 416
L G C + L+V PYM +G + + +R + PT K + L A+G+ YL
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL 149
Query: 417 HEHCDPKIIHRDVKAANILLDE 438
K +HRD+ A N +LDE
Sbjct: 150 ---ASKKFVHRDLAARNCMLDE 168
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 70/142 (49%), Gaps = 17/142 (11%)
Query: 305 NILGRGGFGKVYKGRLAD--GKLV--AVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
++GRG FG VY G L D GK + AVK L G QF TE I+ H N+L
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 361 LYGFC-TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYL 416
L G C + L+V PYM +G + + +R + PT K + L A+G+ YL
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL 144
Query: 417 HEHCDPKIIHRDVKAANILLDE 438
K +HRD+ A N +LDE
Sbjct: 145 ---ASKKFVHRDLAARNCMLDE 163
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 70/142 (49%), Gaps = 17/142 (11%)
Query: 305 NILGRGGFGKVYKGRLAD--GKLV--AVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
++GRG FG VY G L D GK + AVK L G QF TE I+ H N+L
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 361 LYGFC-TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYL 416
L G C + L+V PYM +G + + +R + PT K + L A+G+ YL
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL 148
Query: 417 HEHCDPKIIHRDVKAANILLDE 438
K +HRD+ A N +LDE
Sbjct: 149 ---ASKKFVHRDLAARNCMLDE 167
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 70/142 (49%), Gaps = 17/142 (11%)
Query: 305 NILGRGGFGKVYKGRLAD--GKLV--AVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
++GRG FG VY G L D GK + AVK L G QF TE I+ H N+L
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 361 LYGFC-TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYL 416
L G C + L+V PYM +G + + +R + PT K + L A+G+ YL
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL 149
Query: 417 HEHCDPKIIHRDVKAANILLDE 438
K +HRD+ A N +LDE
Sbjct: 150 ---ASKKFVHRDLAARNCMLDE 168
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 70/142 (49%), Gaps = 17/142 (11%)
Query: 305 NILGRGGFGKVYKGRLAD--GKLV--AVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
++GRG FG VY G L D GK + AVK L G QF TE I+ H N+L
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 361 LYGFC-TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYL 416
L G C + L+V PYM +G + + +R + PT K + L A+G+ YL
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL 147
Query: 417 HEHCDPKIIHRDVKAANILLDE 438
K +HRD+ A N +LDE
Sbjct: 148 ---ASKKFVHRDLAARNCMLDE 166
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 70/142 (49%), Gaps = 17/142 (11%)
Query: 305 NILGRGGFGKVYKGRLAD--GKLV--AVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
++GRG FG VY G L D GK + AVK L G QF TE I+ H N+L
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 361 LYGFC-TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYL 416
L G C + L+V PYM +G + + +R + PT K + L A+G+ YL
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL 141
Query: 417 HEHCDPKIIHRDVKAANILLDE 438
K +HRD+ A N +LDE
Sbjct: 142 ---ASKKFVHRDLAARNCMLDE 160
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 67/145 (46%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL--KEERTSGGELQFQTEVKIIS 351
Q A + F LG+G FG VY R K + A+K L + +G E Q + EV+I S
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LRLYG+ T L+ Y G V L++ L D A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK----LSKFDEQRTATYITELAN 124
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
LSY H ++IHRD+K N+LL
Sbjct: 125 ALSYCH---SKRVIHRDIKPENLLL 146
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 70/141 (49%), Gaps = 17/141 (12%)
Query: 306 ILGRGGFGKVYKGRLAD--GKLV--AVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
++GRG FG VY G L D GK + AVK L G QF TE I+ H N+L L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 362 YGFC-TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYLH 417
G C + L+V PYM +G + + +R + PT K + L A+G+ +L
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKFL- 150
Query: 418 EHCDPKIIHRDVKAANILLDE 438
K +HRD+ A N +LDE
Sbjct: 151 --ASKKFVHRDLAARNCMLDE 169
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 70/141 (49%), Gaps = 17/141 (12%)
Query: 306 ILGRGGFGKVYKGRLAD--GKLV--AVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
++GRG FG VY G L D GK + AVK L G QF TE I+ H N+L L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 362 YGFC-TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYLH 417
G C + L+V PYM +G + + +R + PT K + L A+G+ +L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKFL- 149
Query: 418 EHCDPKIIHRDVKAANILLDE 438
K +HRD+ A N +LDE
Sbjct: 150 --ASKKFVHRDLAARNCMLDE 168
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 70/141 (49%), Gaps = 17/141 (12%)
Query: 306 ILGRGGFGKVYKGRLAD--GKLV--AVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
++GRG FG VY G L D GK + AVK L G QF TE I+ H N+L L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 362 YGFC-TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYLH 417
G C + L+V PYM +G + + +R + PT K + L A+G+ +L
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKFL- 147
Query: 418 EHCDPKIIHRDVKAANILLDE 438
K +HRD+ A N +LDE
Sbjct: 148 --ASKKFVHRDLAARNCMLDE 166
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 70/141 (49%), Gaps = 17/141 (12%)
Query: 306 ILGRGGFGKVYKGRLAD--GKLV--AVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
++GRG FG VY G L D GK + AVK L G QF TE I+ H N+L L
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 362 YGFC-TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYLH 417
G C + L+V PYM +G + + +R + PT K + L A+G+ +L
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKFL- 154
Query: 418 EHCDPKIIHRDVKAANILLDE 438
K +HRD+ A N +LDE
Sbjct: 155 --ASKKFVHRDLAARNCMLDE 173
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 67/145 (46%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL--KEERTSGGELQFQTEVKIIS 351
Q A + F LG+G FG VY R K + A+K L + +G E Q + EV+I S
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LRLYG+ T L+ Y G V L++ L D A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK----LSKFDEQRTATYITELAN 124
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
LSY H ++IHRD+K N+LL
Sbjct: 125 ALSYCH---SKRVIHRDIKPENLLL 146
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 70/141 (49%), Gaps = 17/141 (12%)
Query: 306 ILGRGGFGKVYKGRL--ADGKLV--AVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
++GRG FG VY G L DGK + AVK L G QF TE I+ H N+L L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 362 YGFC-TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYLH 417
G C + L+V PYM +G + + +R + PT K + L A+G+ +L
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKFL- 150
Query: 418 EHCDPKIIHRDVKAANILLDE 438
K +HRD+ A N +LDE
Sbjct: 151 --ASKKFVHRDLAARNCMLDE 169
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 31/160 (19%)
Query: 307 LGRGGFGKVYKGRLADG-------KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLL 359
+G G FG+V++ R A G +VAVK LKEE ++ + FQ E +++ + N++
Sbjct: 55 IGEGAFGRVFQAR-APGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIV 113
Query: 360 RLYGFCTTVTEKLLVYPYMTNG--------------------SVASRLRERQSSLPPLDW 399
+L G C L++ YM G +++R R PPL
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 400 PTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
+ IA A G++YL E K +HRD+ N L+ E+
Sbjct: 174 AEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGEN 210
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 69/145 (47%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL--KEERTSGGELQFQTEVKIIS 351
Q A + F LG+G FG VY R + K + A+K L + +G E Q + EV+I S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LRLYG+ T L+ Y G+V L++ L D A
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELAN 119
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
LSY H K+IHRD+K N+LL
Sbjct: 120 ALSYCH---SKKVIHRDIKPENLLL 141
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
Query: 302 SNKNILGRGGFGKVYKGRL--ADGKL---VAVKRLKEERTSGGELQFQTEVKIISMAVHR 356
+ + ++G G FG+VYKG L + GK VA+K LK T + F E I+ H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 357 NLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYL 416
N++RL G + +++ YM NG++ LRE+ L + G A G+ YL
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQ---LVGMLRGIAAGMKYL 163
Query: 417 HEHCDPKIIHRDVKAANILLDED 439
+ +HRD+ A NIL++ +
Sbjct: 164 ---ANMNYVHRDLAARNILVNSN 183
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 70/141 (49%), Gaps = 17/141 (12%)
Query: 306 ILGRGGFGKVYKGRLAD--GKLV--AVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
++GRG FG VY G L D GK + AVK L G QF TE I+ H N+L L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 362 YGFC-TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYLH 417
G C + L+V PYM +G + + +R + PT K + L A+G+ +L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKFL- 149
Query: 418 EHCDPKIIHRDVKAANILLDE 438
K +HRD+ A N +LDE
Sbjct: 150 --ASKKFVHRDLAARNCMLDE 168
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 70/141 (49%), Gaps = 17/141 (12%)
Query: 306 ILGRGGFGKVYKGRL--ADGKLV--AVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
++GRG FG VY G L DGK + AVK L G QF TE I+ H N+L L
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 362 YGFC-TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYLH 417
G C + L+V PYM +G + + +R + PT K + L A+G+ +L
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKFL- 208
Query: 418 EHCDPKIIHRDVKAANILLDE 438
K +HRD+ A N +LDE
Sbjct: 209 --ASKKFVHRDLAARNCMLDE 227
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 273 VPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL 331
P + E + K ++ Q A + F LG+G FG VY R K + A+K L
Sbjct: 8 APENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL 67
Query: 332 --KEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRE 389
+ +G E Q + EV+I S H N+LRLYG+ T L+ Y G+V L++
Sbjct: 68 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 127
Query: 390 RQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL 436
L D A LSY H ++IHRD+K N+LL
Sbjct: 128 ----LSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 167
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 78/165 (47%), Gaps = 11/165 (6%)
Query: 276 EDDSELQLG-QLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL-- 331
E++ E +L + K ++ Q A + F LG+G FG VY R K + A+K L
Sbjct: 1 ENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK 60
Query: 332 KEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQ 391
+ +G E Q + EV+I S H N+LRLYG+ T L+ Y G+V L++
Sbjct: 61 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-- 118
Query: 392 SSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL 436
L D A LSY H ++IHRD+K N+LL
Sbjct: 119 --LSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLL 158
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 273 VPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL 331
P + E + K ++ Q A + F LG+G FG VY R K + A+K L
Sbjct: 8 APENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL 67
Query: 332 --KEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRE 389
+ +G E Q + EV+I S H N+LRLYG+ T L+ Y G+V L++
Sbjct: 68 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 127
Query: 390 RQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL 436
L D A LSY H ++IHRD+K N+LL
Sbjct: 128 ----LSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 167
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL--KEERTSGGELQFQTEVKIIS 351
Q A + F LG+G FG VY R K + A+K L + +G E Q + EV+I S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LRLYG+ T L+ Y G+V L++ L D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELAN 119
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
LSY H ++IHRD+K N+LL
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLL 141
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL--KEERTSGGELQFQTEVKIIS 351
Q A + F LG+G FG VY R K + A+K L + +G E Q + EV+I S
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LRLYG+ T L+ Y G+V L++ L D A
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELAN 121
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
LSY H ++IHRD+K N+LL
Sbjct: 122 ALSYCH---SKRVIHRDIKPENLLL 143
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL--KEERTSGGELQFQTEVKIIS 351
Q A + F LG+G FG VY R K + A+K L + +G E Q + EV+I S
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LRLYG+ T L+ Y G+V L++ L D A
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELAN 120
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
LSY H ++IHRD+K N+LL
Sbjct: 121 ALSYCH---SKRVIHRDIKPENLLL 142
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL--KEERTSGGELQFQTEVKIIS 351
Q A + F LG+G FG VY R K + A+K L + +G E Q + EV+I S
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LRLYG+ T L+ Y G+V L++ L D A
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELAN 120
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
LSY H ++IHRD+K N+LL
Sbjct: 121 ALSYCH---SKRVIHRDIKPENLLL 142
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL--KEERTSGGELQFQTEVKIIS 351
Q A + F LG+G FG VY R K + A+K L + +G E Q + EV+I S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LRLYG+ T L+ Y G+V L++ L D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELAN 119
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
LSY H ++IHRD+K N+LL
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLL 141
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL--KEERTSGGELQFQTEVKIIS 351
Q A + F LG+G FG VY R K + A+K L + +G E Q + EV+I S
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LRLYG+ T L+ Y G+V L++ L D A
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELAN 121
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
LSY H ++IHRD+K N+LL
Sbjct: 122 ALSYCH---SKRVIHRDIKPENLLL 143
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL--KEERTSGGELQFQTEVKIIS 351
Q A + F LG+G FG VY R K + A+K L + +G E Q + EV+I S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LRLYG+ T L+ Y G+V L++ L D A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELAN 122
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
LSY H ++IHRD+K N+LL
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLL 144
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL--KEERTSGGELQFQTEVKIIS 351
Q A + F LG+G FG VY R K + A+K L + +G E Q + EV+I S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LRLYG+ T L+ Y G+V L++ L D A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELAN 122
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
LSY H ++IHRD+K N+LL
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLL 144
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL--KEERTSGGELQFQTEVKIIS 351
Q A + F LG+G FG VY R K + A+K L + +G E Q + EV+I S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LRLYG+ T L+ Y G+V L++ L D A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELAN 122
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
LSY H ++IHRD+K N+LL
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLL 144
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL--KEERTSGGELQFQTEVKIIS 351
Q A + F LG+G FG VY R K + A+K L + +G E Q + EV+I S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LRLYG+ T L+ Y G+V L++ L D A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELAN 122
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
LSY H ++IHRD+K N+LL
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLL 144
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL--KEERTSGGELQFQTEVKIIS 351
Q A + F LG+G FG VY R K + A+K L + +G E Q + EV+I S
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LRLYG+ T L+ Y G+V L++ L D A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELAN 124
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
LSY H ++IHRD+K N+LL
Sbjct: 125 ALSYCH---SKRVIHRDIKPENLLL 146
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL--KEERTSGGELQFQTEVKIIS 351
Q A + F LG+G FG VY R K + A+K L + +G E Q + EV+I S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LRLYG+ T L+ Y G+V L++ L D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELAN 119
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
LSY H ++IHRD+K N+LL
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLL 141
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL--KEERTSGGELQFQTEVKIIS 351
Q A + F LG+G FG VY R K + A+K L + +G E Q + EV+I S
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LRLYG+ T L+ Y G+V L++ L D A
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELAN 118
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
LSY H ++IHRD+K N+LL
Sbjct: 119 ALSYCH---SKRVIHRDIKPENLLL 140
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
+G G FG V+ G + VA+K +KE S E F E +++ H L++LYG C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMS--EDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIH 426
LV+ +M +G ++ LR ++ T + L G++YL E C +IH
Sbjct: 93 EQAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIH 146
Query: 427 RDVKAANILLDED 439
RD+ A N L+ E+
Sbjct: 147 RDLAARNCLVGEN 159
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL--KEERTSGGELQFQTEVKIIS 351
Q A + F LG+G FG VY R K + A+K L + +G E Q + EV+I S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LRLYG+ T L+ Y G+V L++ L D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELAN 119
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
LSY H ++IHRD+K N+LL
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLL 141
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL--KEERTSGGELQFQTEVKIIS 351
Q A + F LG+G FG VY R K + A+K L + +G E Q + EV+I S
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LRLYG+ T L+ Y G+V L++ L D A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELAN 124
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
LSY H ++IHRD+K N+LL
Sbjct: 125 ALSYCH---SKRVIHRDIKPENLLL 146
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL--KEERTSGGELQFQTEVKIIS 351
Q A + F LG+G FG VY R K + A+K L + +G E Q + EV+I S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LRLYG+ T L+ Y G+V L++ L D A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELAN 122
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
LSY H ++IHRD+K N+LL
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLL 144
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL--KEERTSGGELQFQTEVKIIS 351
Q A + F LG+G FG VY R K + A+K L + +G E Q + EV+I S
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LRLYG+ T L+ Y G+V L++ L D A
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELAN 120
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
LSY H ++IHRD+K N+LL
Sbjct: 121 ALSYCH---SKRVIHRDIKPENLLL 142
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL--KEERTSGGELQFQTEVKIIS 351
Q A + F LG+G FG VY R K + A+K L + +G E Q + EV+I S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LRLYG+ T L+ Y G+V L++ L D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELAN 119
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
LSY H ++IHRD+K N+LL
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLL 141
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL--KEERTSGGELQFQTEVKIIS 351
Q A + F LG+G FG VY R K + A+K L + +G E Q + EV+I S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LRLYG+ T L+ Y G+V L++ L D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELAN 119
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
LSY H ++IHRD+K N+LL
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLL 141
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL--KEERTSGGELQFQTEVKIIS 351
Q A + F LG+G FG VY R K + A+K L + +G E Q + EV+I S
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LRLYG+ T L+ Y G+V L++ L D A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELAN 124
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
LSY H ++IHRD+K N+LL
Sbjct: 125 ALSYCH---SKRVIHRDIKPENLLL 146
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 4/136 (2%)
Query: 304 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGEL-QFQTEVKIISMAVHRNLLRLY 362
K +G G FG V++ G VAVK L E+ + +F EV I+ H N++
Sbjct: 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
G T +V Y++ GS+ RL + + LD R +A A+G++YLH +P
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSL-YRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NP 158
Query: 423 KIIHRDVKAANILLDE 438
I+HRD+K+ N+L+D+
Sbjct: 159 PIVHRDLKSPNLLVDK 174
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL--KEERTSGGELQFQTEVKIIS 351
Q A + F LG+G FG VY R K + A+K L + +G E Q + EV+I S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LRLYG+ T L+ Y G+V L++ L D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELAN 119
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
LSY H ++IHRD+K N+LL
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLL 141
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL--KEERTSGGELQFQTEVKIIS 351
Q A + F LG+G FG VY R K + A+K L + +G E Q + EV+I S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LRLYG+ T L+ Y G+V L++ L D A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELAN 122
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
LSY H ++IHRD+K N+LL
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLL 144
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL--KEERTSGGELQFQTEVKIIS 351
Q A + F LG+G FG VY R K + A+K L + +G E Q + EV+I S
Sbjct: 8 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 67
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LRLYG+ T L+ Y G+V L++ L D A
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELAN 123
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
LSY H ++IHRD+K N+LL
Sbjct: 124 ALSYCH---SKRVIHRDIKPENLLL 145
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL--KEERTSGGELQFQTEVKIIS 351
Q A + F LG+G FG VY R K + A+K L + +G E Q + EV+I S
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LRLYG+ T L+ Y G+V L++ L D A
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELAN 116
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
LSY H ++IHRD+K N+LL
Sbjct: 117 ALSYCH---SKRVIHRDIKPENLLL 138
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
+G G FG V+ G + VA+K ++E S E F E +++ H L++LYG C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIH 426
LV+ +M +G ++ LR ++ T + L G++YL E C +IH
Sbjct: 71 EQAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIH 124
Query: 427 RDVKAANILLDED 439
RD+ A N L+ E+
Sbjct: 125 RDLAARNCLVGEN 137
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
+G G FG V+ G + VA+K ++E S E F E +++ H L++LYG C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIH 426
LV+ +M +G ++ LR ++ T + L G++YL E C +IH
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIH 126
Query: 427 RDVKAANILLDED 439
RD+ A N L+ E+
Sbjct: 127 RDLAARNCLVGEN 139
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
+G G FG V+ G + VA+K ++E S E F E +++ H L++LYG C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIH 426
LV+ +M +G ++ LR ++ T + L G++YL E C +IH
Sbjct: 76 EQAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIH 129
Query: 427 RDVKAANILLDED 439
RD+ A N L+ E+
Sbjct: 130 RDLAARNCLVGEN 142
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 31/182 (17%)
Query: 272 DVPAEDDSELQLGQLKR----FSLRELQVATDGFSNKNILGRGGFGKVYKGR-LADGKLV 326
D PA E+ L L+ F L EL +G G +G+VYKGR + G+L
Sbjct: 5 DSPARSLDEIDLSALRDPAGIFELVEL------------VGNGTYGQVYKGRHVKTGQLA 52
Query: 327 AVKRLKEERTSGGELQFQTEVKIIS-MAVHRNLLRLYGFCTT-----VTEKL-LVYPYMT 379
A+K + + T E + + E+ ++ + HRN+ YG + ++L LV +
Sbjct: 53 AIKVM--DVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCG 110
Query: 380 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
GSV ++ + + +W I RGLS+LH+H K+IHRD+K N+LL E+
Sbjct: 111 AGSVTDLIKNTKGNTLKEEWIAY--ICREILRGLSHLHQH---KVIHRDIKGQNVLLTEN 165
Query: 440 AD 441
A+
Sbjct: 166 AE 167
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 69/148 (46%), Gaps = 23/148 (15%)
Query: 306 ILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKI--ISMAVHRNLLRLYG 363
++GRG +G VYKG L D + VAVK + F E I + + H N+ R
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVF----SFANRQNFINEKNIYRVPLMEHDNIARFIV 74
Query: 364 FCTTVT-----EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLH- 417
VT E LLV Y NGS+ L SL DW + ++A RGL+YLH
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYL-----SLHTSDWVSSCRLAHSVTRGLAYLHT 129
Query: 418 -----EHCDPKIIHRDVKAANILLDEDA 440
+H P I HRD+ + N+L+ D
Sbjct: 130 ELPRGDHYKPAISHRDLNSRNVLVKNDG 157
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 4/136 (2%)
Query: 304 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGEL-QFQTEVKIISMAVHRNLLRLY 362
K +G G FG V++ G VAVK L E+ + +F EV I+ H N++
Sbjct: 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
G T +V Y++ GS+ RL + + LD R +A A+G++YLH +P
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSL-YRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NP 158
Query: 423 KIIHRDVKAANILLDE 438
I+HR++K+ N+L+D+
Sbjct: 159 PIVHRNLKSPNLLVDK 174
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL--KEERTSGGELQFQTEVKIIS 351
Q + F LG+G FG VY R K + A+K L + +G E Q + EV+I S
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQS 67
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LRLYG+ T L+ Y G+V L++ L D A
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSRFDEQRTATYITELAN 123
Query: 412 GLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
LSY H ++IHRD+K N+LL + +
Sbjct: 124 ALSYCH---SKRVIHRDIKPENLLLGSNGE 150
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRL--KEERTSGGELQFQTEVKIIS 351
Q + F LG+G FG VY R K + A+K L + +G E Q + EV+I S
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQS 67
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LRLYG+ T L+ Y G+V L++ L D A
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSRFDEQRTATYITELAN 123
Query: 412 GLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
LSY H ++IHRD+K N+LL + +
Sbjct: 124 ALSYCH---SKRVIHRDIKPENLLLGSNGE 150
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 82/193 (42%), Gaps = 41/193 (21%)
Query: 279 SELQLGQLKRFSLRELQVATDGFSN------------------KNI-----LGRGGFGKV 315
SELQ + K LR + TD N KNI LG G FG+V
Sbjct: 28 SELQSPEYKLSKLRTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEV 87
Query: 316 YKGRLADGK------LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT 369
Y+G+++ VAVK L E + EL F E IIS H+N++R G
Sbjct: 88 YEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 147
Query: 370 EKLLVYPYMTNGSVASRLRE------RQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK 423
+ ++ M G + S LRE + SSL LD +A A G YL E+
Sbjct: 148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQYLEEN---H 201
Query: 424 IIHRDVKAANILL 436
IHRD+ A N LL
Sbjct: 202 FIHRDIAARNCLL 214
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 82/193 (42%), Gaps = 41/193 (21%)
Query: 279 SELQLGQLKRFSLRELQVATDGFSN------------------KNI-----LGRGGFGKV 315
SELQ + K LR + TD N KNI LG G FG+V
Sbjct: 5 SELQSPEYKLSKLRTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEV 64
Query: 316 YKGRLADGK------LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT 369
Y+G+++ VAVK L E + EL F E IIS H+N++R G
Sbjct: 65 YEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 124
Query: 370 EKLLVYPYMTNGSVASRLRE------RQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK 423
+ ++ M G + S LRE + SSL LD +A A G YL E+
Sbjct: 125 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQYLEEN---H 178
Query: 424 IIHRDVKAANILL 436
IHRD+ A N LL
Sbjct: 179 FIHRDIAARNCLL 191
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG G FG V G+ VAVK +KE S E +F E + + H L++ YG C+
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS--EDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIH 426
+V Y++NG + + LR L P ++ G+++L H + IH
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLRSHGKGLEP---SQLLEMCYDVCEGMAFLESH---QFIH 127
Query: 427 RDVKAANILLDED 439
RD+ A N L+D D
Sbjct: 128 RDLAARNCLVDRD 140
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 307 LGRGGFGKVYKGRLADGK------LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
LG G FG+VY+G+++ VAVK L E + EL F E IIS H+N++R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRE------RQSSLPPLDWPTRKKIALGSARGLS 414
G + ++ M G + S LRE + SSL LD +A A G
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 169
Query: 415 YLHEHCDPKIIHRDVKAANILL 436
YL E+ IHRD+ A N LL
Sbjct: 170 YLEEN---HFIHRDIAARNCLL 188
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
+G G FG V+ G + VA+K ++E S E F E +++ H L++LYG C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIH 426
LV +M +G ++ LR ++ T + L G++YL E C +IH
Sbjct: 74 EQAPICLVTEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIH 127
Query: 427 RDVKAANILLDED 439
RD+ A N L+ E+
Sbjct: 128 RDLAARNCLVGEN 140
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 74/142 (52%), Gaps = 14/142 (9%)
Query: 304 KNILGRGGFGKVYKGRL-ADGK---LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLL 359
+ ++G G FG+V +GRL A GK VA+K LK T +F +E I+ H N++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVAS--RLRERQSSLPPLDWPTRKKIALGSARGLSYLH 417
RL G T +++ +M NG++ S RL + Q ++ L + G A G+ YL
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL-----VGMLRGIASGMRYLA 133
Query: 418 EHCDPKIIHRDVKAANILLDED 439
E +HRD+ A NIL++ +
Sbjct: 134 EM---SYVHRDLAARNILVNSN 152
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 307 LGRGGFGKVYKGRLADGK------LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
LG G FG+VY+G+++ VAVK L E + EL F E IIS H+N++R
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRE------RQSSLPPLDWPTRKKIALGSARGLS 414
G + ++ M G + S LRE + SSL LD +A A G
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 154
Query: 415 YLHEHCDPKIIHRDVKAANILL 436
YL E+ IHRD+ A N LL
Sbjct: 155 YLEEN---HFIHRDIAARNCLL 173
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 14/142 (9%)
Query: 304 KNILGRGGFGKVYKGRL-ADGK---LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLL 359
+ ++G G FG+V +GRL A GK VA+K LK T +F +E I+ H N++
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVAS--RLRERQSSLPPLDWPTRKKIALGSARGLSYLH 417
RL G T +++ +M NG++ S RL + Q ++ L R G A G+ YL
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR-----GIASGMRYLA 135
Query: 418 EHCDPKIIHRDVKAANILLDED 439
E +HRD+ A NIL++ +
Sbjct: 136 EM---SYVHRDLAARNILVNSN 154
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 307 LGRGGFGKVYKGRLADGK------LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
LG G FG+VY+G+++ VAVK L E + EL F E IIS H+N++R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRE------RQSSLPPLDWPTRKKIALGSARGLS 414
G + ++ M G + S LRE + SSL LD +A A G
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 169
Query: 415 YLHEHCDPKIIHRDVKAANILL 436
YL E+ IHRD+ A N LL
Sbjct: 170 YLEEN---HFIHRDIAARNCLL 188
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 307 LGRGGFGKVYKGRLADGK------LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
LG G FG+VY+G+++ VAVK L E + EL F E IIS H+N++R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRE------RQSSLPPLDWPTRKKIALGSARGLS 414
G + ++ M G + S LRE + SSL LD +A A G
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 169
Query: 415 YLHEHCDPKIIHRDVKAANILL 436
YL E+ IHRD+ A N LL
Sbjct: 170 YLEEN---HFIHRDIAARNCLL 188
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 307 LGRGGFGKVYKGRLADGK------LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
LG G FG+VY+G+++ VAVK L E + EL F E IIS H+N++R
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRE------RQSSLPPLDWPTRKKIALGSARGLS 414
G + ++ M G + S LRE + SSL LD +A A G
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 154
Query: 415 YLHEHCDPKIIHRDVKAANILL 436
YL E+ IHRD+ A N LL
Sbjct: 155 YLEEN---HFIHRDIAARNCLL 173
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 307 LGRGGFGKVYKGRLADGK------LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
LG G FG+VY+G+++ VAVK L E + EL F E IIS H+N++R
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRE------RQSSLPPLDWPTRKKIALGSARGLS 414
G + ++ M G + S LRE + SSL LD +A A G
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD---LLHVARDIACGCQ 146
Query: 415 YLHEHCDPKIIHRDVKAANILL 436
YL E+ IHRD+ A N LL
Sbjct: 147 YLEEN---HFIHRDIAARNCLL 165
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 307 LGRGGFGKVYKGRLADGK------LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
LG G FG+VY+G+++ VAVK L E + EL F E IIS H+N++R
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRE------RQSSLPPLDWPTRKKIALGSARGLS 414
G + ++ M G + S LRE + SSL LD +A A G
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 155
Query: 415 YLHEHCDPKIIHRDVKAANILL 436
YL E+ IHRD+ A N LL
Sbjct: 156 YLEEN---HFIHRDIAARNCLL 174
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 307 LGRGGFGKVYKGRLADGK------LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
LG G FG+VY+G+++ VAVK L E + EL F E IIS H+N++R
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRE------RQSSLPPLDWPTRKKIALGSARGLS 414
G + ++ M G + S LRE + SSL LD +A A G
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 171
Query: 415 YLHEHCDPKIIHRDVKAANILL 436
YL E+ IHRD+ A N LL
Sbjct: 172 YLEEN---HFIHRDIAARNCLL 190
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 10/140 (7%)
Query: 304 KNILGRGGFGKVYKGRLA-DGK---LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLL 359
+ ++G G FG+V G L GK VA+K LK T F +E I+ H N++
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH 419
L G T T +++ +M NGS+ S LR+ + + G A G+ YL
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI---QLVGMLRGIAAGMKYL--- 151
Query: 420 CDPKIIHRDVKAANILLDED 439
D +HRD+ A NIL++ +
Sbjct: 152 ADMNYVHRDLAARNILVNSN 171
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 307 LGRGGFGKVYKGRLADGK------LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
LG G FG+VY+G+++ VAVK L E + EL F E IIS H+N++R
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRE------RQSSLPPLDWPTRKKIALGSARGLS 414
G + ++ M G + S LRE + SSL LD +A A G
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 155
Query: 415 YLHEHCDPKIIHRDVKAANILL 436
YL E+ IHRD+ A N LL
Sbjct: 156 YLEEN---HFIHRDIAARNCLL 174
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 307 LGRGGFGKVYKGRLADGK------LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
LG G FG+VY+G+++ VAVK L E + EL F E IIS H+N++R
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRE------RQSSLPPLDWPTRKKIALGSARGLS 414
G + ++ M G + S LRE + SSL LD +A A G
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 155
Query: 415 YLHEHCDPKIIHRDVKAANILL 436
YL E+ IHRD+ A N LL
Sbjct: 156 YLEEN---HFIHRDIAARNCLL 174
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 307 LGRGGFGKVYKGRLADGK------LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
LG G FG+VY+G+++ VAVK L E + EL F E IIS H+N++R
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRE------RQSSLPPLDWPTRKKIALGSARGLS 414
G + ++ M G + S LRE + SSL LD +A A G
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 161
Query: 415 YLHEHCDPKIIHRDVKAANILL 436
YL E+ IHRD+ A N LL
Sbjct: 162 YLEEN---HFIHRDIAARNCLL 180
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 14/153 (9%)
Query: 284 GQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQF 343
G L +E++V + ++GRG FG V K + K VA+K+++ E F
Sbjct: 1 GSLHMIDYKEIEV-------EEVVGRGAFGVVCKAKW-RAKDVAIKQIESESERKA---F 49
Query: 344 QTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRK 403
E++ +S H N+++LYG C + LV Y GS+ + L + LP
Sbjct: 50 IVELRQLSRVNHPNIVKLYGAC--LNPVCLVMEYAEGGSLYNVLHGAEP-LPYYTAAHAM 106
Query: 404 KIALGSARGLSYLHEHCDPKIIHRDVKAANILL 436
L ++G++YLH +IHRD+K N+LL
Sbjct: 107 SWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL 139
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 76/170 (44%), Gaps = 36/170 (21%)
Query: 301 FSNKNI-----LGRGGFGKVYK-------GRLADGKLVAVKRLKEERTSGGELQFQTEVK 348
F KN+ LG G FGKV K GR A VAVK LKE + +E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGR-AGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 349 IISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLP------------P 396
++ H ++++LYG C+ LL+ Y GS+ LRE + P
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 397 LDWPTRKKIALGS--------ARGLSYLHEHCDPKIIHRDVKAANILLDE 438
LD P + + +G ++G+ YL E K++HRD+ A NIL+ E
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAE 185
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 76/170 (44%), Gaps = 36/170 (21%)
Query: 301 FSNKNI-----LGRGGFGKVYK-------GRLADGKLVAVKRLKEERTSGGELQFQTEVK 348
F KN+ LG G FGKV K GR A VAVK LKE + +E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGR-AGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 349 IISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLP------------P 396
++ H ++++LYG C+ LL+ Y GS+ LRE + P
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 397 LDWPTRKKIALGS--------ARGLSYLHEHCDPKIIHRDVKAANILLDE 438
LD P + + +G ++G+ YL E K++HRD+ A NIL+ E
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAE 185
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 307 LGRGGFGKVYKGRLADGK------LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
LG G FG+VY+G+++ VAVK L E + EL F E IIS H+N++R
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRE------RQSSLPPLDWPTRKKIALGSARGLS 414
G + ++ M G + S LRE + SSL LD +A A G
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 181
Query: 415 YLHEHCDPKIIHRDVKAANILL 436
YL E+ IHRD+ A N LL
Sbjct: 182 YLEEN---HFIHRDIAARNCLL 200
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
+G G FG V+ G + VA+K ++E S E F E +++ H L++LYG C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIH 426
LV+ +M +G ++ LR ++ T + L G++YL E +IH
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEE---ASVIH 126
Query: 427 RDVKAANILLDED 439
RD+ A N L+ E+
Sbjct: 127 RDLAARNCLVGEN 139
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 67/141 (47%), Gaps = 16/141 (11%)
Query: 306 ILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQTEVKIISMAVHRNL 358
++G G FG+V GRL KL VA+K LK T F E I+ H N+
Sbjct: 52 VVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108
Query: 359 LRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE 418
+RL G T ++V YM NGS+ S LR+ + + + G A G+ YL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGMKYL-- 163
Query: 419 HCDPKIIHRDVKAANILLDED 439
D +HRD+ A NIL++ +
Sbjct: 164 -SDMGFVHRDLAARNILINSN 183
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLYGFC 365
+G G FG VYKG+ VAVK L + +LQ F+ EV ++ H N+L G+
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 88
Query: 366 TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKII 425
+T + +V + S+ L +S + IA +ARG+ YLH II
Sbjct: 89 STAPQLAIVTQWCEGSSLYHHL---HASETKFEMKKLIDIARQTARGMDYLHAKS---II 142
Query: 426 HRDVKAANILLDED 439
HRD+K+ NI L ED
Sbjct: 143 HRDLKSNNIFLHED 156
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 64/134 (47%), Gaps = 10/134 (7%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLYGFC 365
+G G FG VYKG+ VAVK L + +LQ F+ EV ++ H N+L G+
Sbjct: 20 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 366 TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKII 425
T +L + GS S +S + IA +ARG+ YLH II
Sbjct: 78 TK--PQLAIVTQWCEGS--SLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---II 130
Query: 426 HRDVKAANILLDED 439
HRD+K+ NI L ED
Sbjct: 131 HRDLKSNNIFLHED 144
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 67/141 (47%), Gaps = 16/141 (11%)
Query: 306 ILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQTEVKIISMAVHRNL 358
++G G FG+V GRL KL VA+K LK T F E I+ H N+
Sbjct: 23 VVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 79
Query: 359 LRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE 418
+RL G T ++V YM NGS+ S LR+ + + + G A G+ YL
Sbjct: 80 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGMKYL-- 134
Query: 419 HCDPKIIHRDVKAANILLDED 439
D +HRD+ A NIL++ +
Sbjct: 135 -SDMGYVHRDLAARNILINSN 154
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 67/141 (47%), Gaps = 16/141 (11%)
Query: 306 ILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQTEVKIISMAVHRNL 358
++G G FG+V GRL KL VA+K LK T F E I+ H N+
Sbjct: 52 VVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108
Query: 359 LRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE 418
+RL G T ++V YM NGS+ S LR+ + + + G A G+ YL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGMKYL-- 163
Query: 419 HCDPKIIHRDVKAANILLDED 439
D +HRD+ A NIL++ +
Sbjct: 164 -SDMGYVHRDLAARNILINSN 183
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 67/141 (47%), Gaps = 16/141 (11%)
Query: 306 ILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQTEVKIISMAVHRNL 358
++G G FG+V GRL KL VA+K LK T F E I+ H N+
Sbjct: 52 VVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108
Query: 359 LRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE 418
+RL G T ++V YM NGS+ S LR+ + + + G A G+ YL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGMKYL-- 163
Query: 419 HCDPKIIHRDVKAANILLDED 439
D +HRD+ A NIL++ +
Sbjct: 164 -SDMGYVHRDLAARNILINSN 183
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 67/141 (47%), Gaps = 16/141 (11%)
Query: 306 ILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQTEVKIISMAVHRNL 358
++G G FG+V GRL KL VA+K LK T F E I+ H N+
Sbjct: 52 VVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108
Query: 359 LRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE 418
+RL G T ++V YM NGS+ S LR+ + + + G A G+ YL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGMKYL-- 163
Query: 419 HCDPKIIHRDVKAANILLDED 439
D +HRD+ A NIL++ +
Sbjct: 164 -SDMGYVHRDLAARNILINSN 183
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 67/141 (47%), Gaps = 16/141 (11%)
Query: 306 ILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQTEVKIISMAVHRNL 358
++G G FG+V GRL KL VA+K LK T F E I+ H N+
Sbjct: 50 VVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 106
Query: 359 LRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE 418
+RL G T ++V YM NGS+ S LR+ + + + G A G+ YL
Sbjct: 107 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGMKYL-- 161
Query: 419 HCDPKIIHRDVKAANILLDED 439
D +HRD+ A NIL++ +
Sbjct: 162 -SDMGYVHRDLAARNILINSN 181
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 68/146 (46%), Gaps = 16/146 (10%)
Query: 301 FSNKNILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQTEVKIISMA 353
S ++G G FG+V GRL KL VA+K LK T F E I+
Sbjct: 35 ISIDKVVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 91
Query: 354 VHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGL 413
H N++RL G T ++V YM NGS+ S LR+ + + + G A G+
Sbjct: 92 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGM 148
Query: 414 SYLHEHCDPKIIHRDVKAANILLDED 439
YL D +HRD+ A NIL++ +
Sbjct: 149 KYL---SDMGYVHRDLAARNILINSN 171
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 67/141 (47%), Gaps = 16/141 (11%)
Query: 306 ILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQTEVKIISMAVHRNL 358
++G G FG+V GRL KL VA+K LK T F E I+ H N+
Sbjct: 52 VVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108
Query: 359 LRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE 418
+RL G T ++V YM NGS+ S LR+ + + + G A G+ YL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGMKYL-- 163
Query: 419 HCDPKIIHRDVKAANILLDED 439
D +HRD+ A NIL++ +
Sbjct: 164 -SDMGYVHRDLAARNILINSN 183
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 67/141 (47%), Gaps = 16/141 (11%)
Query: 306 ILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQTEVKIISMAVHRNL 358
++G G FG+V GRL KL VA+K LK T F E I+ H N+
Sbjct: 52 VVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108
Query: 359 LRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE 418
+RL G T ++V YM NGS+ S LR+ + + + G A G+ YL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGMKYL-- 163
Query: 419 HCDPKIIHRDVKAANILLDED 439
D +HRD+ A NIL++ +
Sbjct: 164 -SDMGYVHRDLAARNILINSN 183
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 67/141 (47%), Gaps = 16/141 (11%)
Query: 306 ILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQTEVKIISMAVHRNL 358
++G G FG+V GRL KL VA+K LK T F E I+ H N+
Sbjct: 52 VVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108
Query: 359 LRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE 418
+RL G T ++V YM NGS+ S LR+ + + + G A G+ YL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGMKYL-- 163
Query: 419 HCDPKIIHRDVKAANILLDED 439
D +HRD+ A NIL++ +
Sbjct: 164 -SDMGYVHRDLAARNILINSN 183
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 16/154 (10%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG G FGKVYK + + ++A ++ + ++ + E+ I++ H N+++L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIH 426
++ + G+V + + E + PL + + + L+YLH D KIIH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELER---PLTESQIQVVCKQTLDALNYLH---DNKIIH 158
Query: 427 RDVKAANILLDEDAD----------QSSKTILRR 450
RD+KA NIL D D ++++TI RR
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRR 192
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 64/134 (47%), Gaps = 10/134 (7%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLYGFC 365
+G G FG VYKG+ VAVK L + +LQ F+ EV ++ H N+L G+
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 366 TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKII 425
T +L + GS S +S + IA +ARG+ YLH II
Sbjct: 90 TK--PQLAIVTQWCEGS--SLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---II 142
Query: 426 HRDVKAANILLDED 439
HRD+K+ NI L ED
Sbjct: 143 HRDLKSNNIFLHED 156
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 75/170 (44%), Gaps = 36/170 (21%)
Query: 301 FSNKNI-----LGRGGFGKVYK-------GRLADGKLVAVKRLKEERTSGGELQFQTEVK 348
F KN+ LG G FGKV K GR A VAVK LKE + +E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGR-AGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 349 IISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLP------------P 396
++ H ++++LYG C+ LL+ Y GS+ LRE + P
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 397 LDWPTRKKIALGS--------ARGLSYLHEHCDPKIIHRDVKAANILLDE 438
LD P + + +G ++G+ YL E ++HRD+ A NIL+ E
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAE 185
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 18/139 (12%)
Query: 306 ILGRGGFGKVYKG-RLADGKLV----AVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
+LG G FG VYKG + +G+ V A+K L E ++F E I++ H +L+R
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARGLSYLH 417
L G C + T + LV M +G + + E + ++ L+W + A+G+ YL
Sbjct: 82 LLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYLE 134
Query: 418 EHCDPKIIHRDVKAANILL 436
E +++HRD+ A N+L+
Sbjct: 135 ER---RLVHRDLAARNVLV 150
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 7/133 (5%)
Query: 304 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYG 363
+ ++GRG FG V K + K VA+K+++ E F E++ +S H N+++LYG
Sbjct: 13 EEVVGRGAFGVVCKAKW-RAKDVAIKQIESESERKA---FIVELRQLSRVNHPNIVKLYG 68
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK 423
C + LV Y GS+ + L + LP L ++G++YLH
Sbjct: 69 AC--LNPVCLVMEYAEGGSLYNVLHGAEP-LPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 125
Query: 424 IIHRDVKAANILL 436
+IHRD+K N+LL
Sbjct: 126 LIHRDLKPPNLLL 138
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 21/149 (14%)
Query: 307 LGRGGFGKVYKGRL------ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
LG G FGKV+ D LVAVK LKE S + FQ E ++++M H++++R
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ-DFQREAELLTMLQHQHIVR 84
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRER----------QSSLP-PLDWPTRKKIALGS 409
+G CT L+V+ YM +G + LR + P PL +A
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 410 ARGLSYLHEHCDPKIIHRDVKAANILLDE 438
A G+ YL +HRD+ N L+ +
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQ 170
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 18/140 (12%)
Query: 305 NILGRGGFGKVYKG-RLADGKLV----AVKRLKEERTSGGELQFQTEVKIISMAVHRNLL 359
+LG G FG VYKG + +G+ V A+K L E ++F E I++ H +L+
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARGLSYL 416
RL G C + T + LV M +G + + E + ++ L+W + A+G+ YL
Sbjct: 104 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYL 156
Query: 417 HEHCDPKIIHRDVKAANILL 436
E +++HRD+ A N+L+
Sbjct: 157 EER---RLVHRDLAARNVLV 173
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 6/135 (4%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG G FGKVYK + + ++A ++ + ++ + E+ I++ H N+++L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIH 426
++ + G+V + + E + PL + + + L+YLH D KIIH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELER---PLTESQIQVVCKQTLDALNYLH---DNKIIH 158
Query: 427 RDVKAANILLDEDAD 441
RD+KA NIL D D
Sbjct: 159 RDLKAGNILFTLDGD 173
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 6/135 (4%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG G FGKVYK + + ++A ++ + ++ + E+ I++ H N+++L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIH 426
++ + G+V + + E + PL + + + L+YLH D KIIH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELER---PLTESQIQVVCKQTLDALNYLH---DNKIIH 158
Query: 427 RDVKAANILLDEDAD 441
RD+KA NIL D D
Sbjct: 159 RDLKAGNILFTLDGD 173
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 21/149 (14%)
Query: 307 LGRGGFGKVYKGRL------ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
LG G FGKV+ D LVAVK LKE S + FQ E ++++M H++++R
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ-DFQREAELLTMLQHQHIVR 78
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRER----------QSSLP-PLDWPTRKKIALGS 409
+G CT L+V+ YM +G + LR + P PL +A
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 410 ARGLSYLHEHCDPKIIHRDVKAANILLDE 438
A G+ YL +HRD+ N L+ +
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQ 164
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%)
Query: 110 HIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNXXXXXXXXXXXXXXXX 169
+IP +G++ L L+L N +G+IPD + +L+ L L L++N
Sbjct: 644 YIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTML 703
Query: 170 XXXXXXNNRLSGPVPDNGSFSQFTPISFENNLNLCG 205
NN LSGP+P+ G F F P F NN LCG
Sbjct: 704 TEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG 739
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%)
Query: 111 IPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNXXXXXXXXXXXXXXXXX 170
IPS+LG+L KL+ L L+ N+ G IP L +K L+ L L+ N
Sbjct: 431 IPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLN 490
Query: 171 XXXXXNNRLSGPVP 184
NNRL+G +P
Sbjct: 491 WISLSNNRLTGEIP 504
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 111 IPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 150
IP L N +L SL L N +GTIP +L +L +L+ L+L
Sbjct: 407 IPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKL 446
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 110 HIPSALGNLIKLKSLDLYSNLFNGTIPDTL 139
+IP+ LG+ L LDL +NLFNGTIP +
Sbjct: 526 NIPAELGDCRSLIWLDLNTNLFNGTIPAAM 555
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 110 HIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNN 153
IP +G L L L L +N F+G IP L + + L +L LN N
Sbjct: 502 EIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTN 545
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%)
Query: 110 HIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNXXXXXXXXXXXXXXXX 169
+IP +G++ L L+L N +G+IPD + +L+ L L L++N
Sbjct: 647 YIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTML 706
Query: 170 XXXXXXNNRLSGPVPDNGSFSQFTPISFENNLNLCG 205
NN LSGP+P+ G F F P F NN LCG
Sbjct: 707 TEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG 742
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 43/107 (40%)
Query: 78 LGNAALSGELAPXXXXXXXXXXXXXXXXXXXXHIPSALGNLIKLKSLDLYSNLFNGTIPD 137
L N +G++ P IPS+LG+L KL+ L L+ N+ G IP
Sbjct: 401 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 460
Query: 138 TLANLKQLKYLRLNNNXXXXXXXXXXXXXXXXXXXXXXNNRLSGPVP 184
L +K L+ L L+ N NNRL+G +P
Sbjct: 461 ELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 507
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 110 HIPSALGNLIKLKSLDLYSNLFNGTIPDTL 139
+IP+ LG+ L LDL +NLFNGTIP +
Sbjct: 529 NIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 110 HIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNN 153
IP +G L L L L +N F+G IP L + + L +L LN N
Sbjct: 505 EIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTN 548
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 21/149 (14%)
Query: 307 LGRGGFGKVYKGRL------ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
LG G FGKV+ D LVAVK LKE S + FQ E ++++M H++++R
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ-DFQREAELLTMLQHQHIVR 107
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRER----------QSSLP-PLDWPTRKKIALGS 409
+G CT L+V+ YM +G + LR + P PL +A
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 410 ARGLSYLHEHCDPKIIHRDVKAANILLDE 438
A G+ YL +HRD+ N L+ +
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQ 193
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 14/154 (9%)
Query: 290 SLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGELQFQTEVK 348
SL + ++ + K+ LG G FG+VY+G L VAVK LKE+ E F E
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 59
Query: 349 IISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRE--RQSSLPPLDWPTRKKIA 406
++ H NL++L G CT ++ +MT G++ LRE RQ +
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--------VSAVVL 111
Query: 407 LGSARGLSYLHEHCDPK-IIHRDVKAANILLDED 439
L A +S E+ + K IHRD+ A N L+ E+
Sbjct: 112 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 145
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 10/140 (7%)
Query: 304 KNILGRGGFGKVYKGRLA-DGK---LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLL 359
+ ++G G FG+V G L GK VA+K LK T F +E I+ H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH 419
L G T T +++ +M NGS+ S LR+ + + G A G+ YL
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQ---LVGMLRGIAAGMKYL--- 125
Query: 420 CDPKIIHRDVKAANILLDED 439
D +HR + A NIL++ +
Sbjct: 126 ADMNYVHRALAARNILVNSN 145
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 17/160 (10%)
Query: 293 ELQVATDGFSNKNILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQT 345
E +VA + + LG+G FG VY+G +A G + VA+K + E + ++F
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 346 EVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSL---PPLDWPTR 402
E ++ +++RL G + L++ MT G + S LR + ++ P L P+
Sbjct: 78 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 137
Query: 403 KK---IALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
K +A A G++YL+ + K +HRD+ A N ++ ED
Sbjct: 138 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 174
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 67/142 (47%), Gaps = 9/142 (6%)
Query: 301 FSNKNILGRGGFGKVYKGRLADGK-LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLL 359
F+ + +G+G FG+VYKG K +VA+K + E Q E+ ++S +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH 419
R +G T+ ++ Y+ GS L+ PL+ I +GL YLH
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPG-----PLEETYIATILREILKGLDYLHSE 135
Query: 420 CDPKIIHRDVKAANILLDEDAD 441
+ IHRD+KAAN+LL E D
Sbjct: 136 ---RKIHRDIKAANVLLSEQGD 154
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLYGFC 365
+G G FG VYKG+ VAVK L + +LQ F+ EV ++ H N+L G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 72
Query: 366 TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKII 425
+T + +V + S+ L ++ + IA +A+G+ YLH II
Sbjct: 73 STAPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---II 126
Query: 426 HRDVKAANILLDED 439
HRD+K+ NI L ED
Sbjct: 127 HRDLKSNNIFLHED 140
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 17/160 (10%)
Query: 293 ELQVATDGFSNKNILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQT 345
E +VA + + LG+G FG VY+G +A G + VA+K + E + ++F
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 67
Query: 346 EVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSL---PPLDWPTR 402
E ++ +++RL G + L++ MT G + S LR + ++ P L P+
Sbjct: 68 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 127
Query: 403 KK---IALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
K +A A G++YL+ + K +HRD+ A N ++ ED
Sbjct: 128 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 164
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 17/164 (10%)
Query: 289 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGEL 341
F E +VA + + LG+G FG VY+G +A G + VA+K + E + +
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 342 QFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSL---PPLD 398
+F E ++ +++RL G + L++ MT G + S LR + + P L
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 399 WPTRKK---IALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
P+ K +A A G++YL+ + K +HRD+ A N ++ ED
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 165
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 17/160 (10%)
Query: 293 ELQVATDGFSNKNILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQT 345
E +VA + + LG+G FG VY+G +A G + VA+K + E + ++F
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 346 EVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSL---PPLDWPTR 402
E ++ +++RL G + L++ MT G + S LR + + P L P+
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 130
Query: 403 KK---IALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
K +A A G++YL+ + K +HRD+ A N ++ ED
Sbjct: 131 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 167
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 75/162 (46%), Gaps = 15/162 (9%)
Query: 284 GQLKRFSLRELQVATDG---FSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGG 339
G LK + EL D FS+ +G G FG VY R + + ++VA+K++
Sbjct: 36 GSLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSN 95
Query: 340 ELQFQT---EVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP 396
E ++Q EV+ + H N ++ G LV Y GS + L + P
Sbjct: 96 E-KWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKK---P 150
Query: 397 LDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE 438
L + G+ +GL+YLH H +IHRDVKA NILL E
Sbjct: 151 LQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSE 189
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 12/156 (7%)
Query: 290 SLRELQVATDGFSNK--NILGRGGFGKVYKGRL-ADGK---LVAVKRLKEERTSGGELQF 343
++RE D K ++G G FG+V GRL GK VA+K LK T F
Sbjct: 3 AVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDF 62
Query: 344 QTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRK 403
+E I+ H N++ L G T +++ YM NGS+ + LR+ +
Sbjct: 63 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---QLV 119
Query: 404 KIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
+ G G+ YL D +HRD+ A NIL++ +
Sbjct: 120 GMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSN 152
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 17/160 (10%)
Query: 293 ELQVATDGFSNKNILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQT 345
E +VA + + LG+G FG VY+G +A G + VA+K + E + ++F
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 99
Query: 346 EVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSL---PPLDWPTR 402
E ++ +++RL G + L++ MT G + S LR + + P L P+
Sbjct: 100 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 159
Query: 403 KK---IALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
K +A A G++YL+ + K +HRD+ A N ++ ED
Sbjct: 160 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 196
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 12/156 (7%)
Query: 290 SLRELQVATDGFSNK--NILGRGGFGKVYKGRL-ADGK---LVAVKRLKEERTSGGELQF 343
++RE D K ++G G FG+V GRL GK VA+K LK T F
Sbjct: 18 AVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDF 77
Query: 344 QTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRK 403
+E I+ H N++ L G T +++ YM NGS+ + LR+ +
Sbjct: 78 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---QLV 134
Query: 404 KIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
+ G G+ YL D +HRD+ A NIL++ +
Sbjct: 135 GMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSN 167
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 17/160 (10%)
Query: 293 ELQVATDGFSNKNILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQT 345
E +VA + + LG+G FG VY+G +A G + VA+K + E + ++F
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 346 EVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSL---PPLDWPTR 402
E ++ +++RL G + L++ MT G + S LR + + P L P+
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 403 KK---IALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
K +A A G++YL+ + K +HRD+ A N ++ ED
Sbjct: 123 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 159
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 14/154 (9%)
Query: 290 SLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGELQFQTEVK 348
SL + ++ + K+ LG G +G+VY+G L VAVK LKE+ E F E
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 59
Query: 349 IISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRE--RQSSLPPLDWPTRKKIA 406
++ H NL++L G CT ++ +MT G++ LRE RQ +
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE--------VSAVVL 111
Query: 407 LGSARGLSYLHEHCDPK-IIHRDVKAANILLDED 439
L A +S E+ + K IHRD+ A N L+ E+
Sbjct: 112 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 145
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 17/160 (10%)
Query: 293 ELQVATDGFSNKNILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQT 345
E +VA + + LG+G FG VY+G +A G + VA+K + E + ++F
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 346 EVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSL---PPLDWPTR 402
E ++ +++RL G + L++ MT G + S LR + + P L P+
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 130
Query: 403 KK---IALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
K +A A G++YL+ + K +HRD+ A N ++ ED
Sbjct: 131 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 167
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 10/140 (7%)
Query: 304 KNILGRGGFGKVYKGRL-ADGK---LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLL 359
+ ++G G FG+V GRL GK VA+K LK T F +E I+ H N++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH 419
L G T +++ YM NGS+ + LR+ + + G G+ YL
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---QLVGMLRGIGSGMKYLS-- 127
Query: 420 CDPKIIHRDVKAANILLDED 439
D +HRD+ A NIL++ +
Sbjct: 128 -DMSYVHRDLAARNILVNSN 146
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 17/160 (10%)
Query: 293 ELQVATDGFSNKNILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQT 345
E +VA + + LG+G FG VY+G +A G + VA+K + E + ++F
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 346 EVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSL---PPLDWPTR 402
E ++ +++RL G + L++ MT G + S LR + + P L P+
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 403 KK---IALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
K +A A G++YL+ + K +HRD+ A N ++ ED
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 161
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 17/160 (10%)
Query: 293 ELQVATDGFSNKNILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQT 345
E +VA + + LG+G FG VY+G +A G + VA+K + E + ++F
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 346 EVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSL---PPLDWPTR 402
E ++ +++RL G + L++ MT G + S LR + + P L P+
Sbjct: 78 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 137
Query: 403 KK---IALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
K +A A G++YL+ + K +HRD+ A N ++ ED
Sbjct: 138 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 174
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 17/160 (10%)
Query: 293 ELQVATDGFSNKNILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQT 345
E +VA + + LG+G FG VY+G +A G + VA+K + E + ++F
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 346 EVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSL---PPLDWPTR 402
E ++ +++RL G + L++ MT G + S LR + + P L P+
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 403 KK---IALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
K +A A G++YL+ + K +HRD+ A N ++ ED
Sbjct: 132 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 168
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 22/151 (14%)
Query: 300 GFSNKNILGRGGFGKVYKGRLAD-GKLVAVKR-LKEERTSGGELQFQTEVKIISMAVHRN 357
+++ ++G G FG VY+ +L D G+LVA+K+ L+++R ELQ I+ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ------IMRKLDHCN 74
Query: 358 LLRLYGFCTTVTEK--------LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS 409
++RL F + EK +L Y T VA + +LP + K
Sbjct: 75 IVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVI---YVKLYMYQL 131
Query: 410 ARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440
R L+Y+H I HRD+K N+LLD D
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPDT 159
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 17/160 (10%)
Query: 293 ELQVATDGFSNKNILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQT 345
E +VA + + LG+G FG VY+G +A G + VA+K + E + ++F
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 346 EVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSL---PPLDWPTR 402
E ++ +++RL G + L++ MT G + S LR + + P L P+
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 403 KK---IALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
K +A A G++YL+ + K +HRD+ A N ++ ED
Sbjct: 132 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 168
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 22/151 (14%)
Query: 300 GFSNKNILGRGGFGKVYKGRLAD-GKLVAVKR-LKEERTSGGELQFQTEVKIISMAVHRN 357
+++ ++G G FG VY+ +L D G+LVA+K+ L+++R ELQ I+ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ------IMRKLDHCN 74
Query: 358 LLRLYGFCTTVTEK--------LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS 409
++RL F + EK +L Y T VA + +LP + K
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI---YVKLYMYQL 131
Query: 410 ARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440
R L+Y+H I HRD+K N+LLD D
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPDT 159
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 22/151 (14%)
Query: 300 GFSNKNILGRGGFGKVYKGRLAD-GKLVAVKR-LKEERTSGGELQFQTEVKIISMAVHRN 357
+++ ++G G FG VY+ +L D G+LVA+K+ L+++R ELQ I+ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ------IMRKLDHCN 74
Query: 358 LLRLYGFCTTVTEK--------LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS 409
++RL F + EK +L Y T VA + +LP + K
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI---YVKLYMYQL 131
Query: 410 ARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440
R L+Y+H I HRD+K N+LLD D
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPDT 159
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 22/151 (14%)
Query: 300 GFSNKNILGRGGFGKVYKGRLAD-GKLVAVKR-LKEERTSGGELQFQTEVKIISMAVHRN 357
+++ ++G G FG VY+ +L D G+LVA+K+ L+++R ELQ I+ H N
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ------IMRKLDHCN 75
Query: 358 LLRLYGFCTTVTEK--------LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS 409
++RL F + EK +L Y T VA + +LP + K
Sbjct: 76 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI---YVKLYMYQL 132
Query: 410 ARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440
R L+Y+H I HRD+K N+LLD D
Sbjct: 133 FRSLAYIHSF---GICHRDIKPQNLLLDPDT 160
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 65/142 (45%), Gaps = 9/142 (6%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLL 359
F+ +G+G FG+V+KG K+VA+K + E Q E+ ++S +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH 419
+ YG T+ ++ Y+ GS L PLD I +GL YLH
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE 143
Query: 420 CDPKIIHRDVKAANILLDEDAD 441
K IHRD+KAAN+LL E +
Sbjct: 144 ---KKIHRDIKAANVLLSEHGE 162
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 87/175 (49%), Gaps = 20/175 (11%)
Query: 271 FDVPAEDDSELQ-LGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKG-RLADGK---- 324
+D+P ++ Q G+ +L + T+ F +LG G FG VYKG + +G+
Sbjct: 12 YDIPTTENLYFQGSGEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKI 70
Query: 325 LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVA 384
VA+K L+E + + E +++ + ++ RL G C T T +L+ M G +
Sbjct: 71 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQ-LMPFGCLL 129
Query: 385 SRLRERQSSLPP---LDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL 436
+RE + ++ L+W + A+G++YL D +++HRD+ A N+L+
Sbjct: 130 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLV 175
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 14/154 (9%)
Query: 290 SLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGELQFQTEVK 348
SL + ++ + K+ LG G +G+VY+G L VAVK LKE+ E F E
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 59
Query: 349 IISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRE--RQSSLPPLDWPTRKKIA 406
++ H NL++L G CT ++ +MT G++ LRE RQ +
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--------VSAVVL 111
Query: 407 LGSARGLSYLHEHCDPK-IIHRDVKAANILLDED 439
L A +S E+ + K IHRD+ A N L+ E+
Sbjct: 112 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 145
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 22/151 (14%)
Query: 300 GFSNKNILGRGGFGKVYKGRLAD-GKLVAVKR-LKEERTSGGELQFQTEVKIISMAVHRN 357
+++ ++G G FG VY+ +L D G+LVA+K+ L+++R ELQ I+ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ------IMRKLDHCN 74
Query: 358 LLRLYGFCTTVTEK--------LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS 409
++RL F + EK +L Y T VA + +LP + K
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI---YVKLYMYQL 131
Query: 410 ARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440
R L+Y+H I HRD+K N+LLD D
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPDT 159
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLYGFC 365
+G G FG VYKG+ VAVK L + +LQ F+ EV ++ H N+L G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 366 TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKII 425
T + +V + S+ L ++ + IA +A+G+ YLH II
Sbjct: 74 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---II 126
Query: 426 HRDVKAANILLDED 439
HRD+K+ NI L ED
Sbjct: 127 HRDLKSNNIFLHED 140
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 74/148 (50%), Gaps = 19/148 (12%)
Query: 307 LGRGGFGKVYKG------RLADGKLVAVKRLKEERTSGGELQFQTEVKI-ISMAVHRNLL 359
LGRG FG+V + + A + VAVK LKE T +E+KI I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 360 RLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPL-----DWPTRKKIALGS---A 410
L G CT L+V + G++++ LR +++ P D+ T + + S A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDE 438
+G+ +L K IHRD+ A NILL E
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSE 179
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLYGFC 365
+G G FG VYKG+ VAVK L + +LQ F+ EV ++ H N+L G+
Sbjct: 18 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 366 TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKII 425
T + +V + S+ L ++ + IA +A+G+ YLH II
Sbjct: 76 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---II 128
Query: 426 HRDVKAANILLDED 439
HRD+K+ NI L ED
Sbjct: 129 HRDLKSNNIFLHED 142
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 22/151 (14%)
Query: 300 GFSNKNILGRGGFGKVYKGRLAD-GKLVAVKR-LKEERTSGGELQFQTEVKIISMAVHRN 357
+++ ++G G FG VY+ +L D G+LVA+K+ L+++R ELQ I+ H N
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ------IMRKLDHCN 87
Query: 358 LLRLYGFCTTVTEK--------LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS 409
++RL F + EK +L Y T VA + +LP + K
Sbjct: 88 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI---YVKLYMYQL 144
Query: 410 ARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440
R L+Y+H I HRD+K N+LLD D
Sbjct: 145 FRSLAYIHSF---GICHRDIKPQNLLLDPDT 172
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLYGFC 365
+G G FG VYKG+ VAVK L + +LQ F+ EV ++ H N+L G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 366 TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKII 425
T + +V + S+ L ++ + IA +A+G+ YLH II
Sbjct: 74 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---II 126
Query: 426 HRDVKAANILLDED 439
HRD+K+ NI L ED
Sbjct: 127 HRDLKSNNIFLHED 140
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLYGFC 365
+G G FG VYKG+ VAVK L + +LQ F+ EV ++ H N+L G+
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 366 TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKII 425
T + +V + S+ L ++ + IA +A+G+ YLH II
Sbjct: 79 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---II 131
Query: 426 HRDVKAANILLDED 439
HRD+K+ NI L ED
Sbjct: 132 HRDLKSNNIFLHED 145
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 22/151 (14%)
Query: 300 GFSNKNILGRGGFGKVYKGRLAD-GKLVAVKR-LKEERTSGGELQFQTEVKIISMAVHRN 357
+++ ++G G FG VY+ +L D G+LVA+K+ L+++R ELQ I+ H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ------IMRKLDHCN 86
Query: 358 LLRLYGFCTTVTEK--------LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS 409
++RL F + EK +L Y T VA + +LP + K
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI---YVKLYMYQL 143
Query: 410 ARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440
R L+Y+H I HRD+K N+LLD D
Sbjct: 144 FRSLAYIHSF---GICHRDIKPQNLLLDPDT 171
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 22/151 (14%)
Query: 300 GFSNKNILGRGGFGKVYKGRLAD-GKLVAVKR-LKEERTSGGELQFQTEVKIISMAVHRN 357
+++ ++G G FG VY+ +L D G+LVA+K+ L+++R ELQ I+ H N
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ------IMRKLDHCN 82
Query: 358 LLRLYGFCTTVTEK--------LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS 409
++RL F + EK +L Y T VA + +LP + K
Sbjct: 83 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI---YVKLYMYQL 139
Query: 410 ARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440
R L+Y+H I HRD+K N+LLD D
Sbjct: 140 FRSLAYIHSF---GICHRDIKPQNLLLDPDT 167
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 22/151 (14%)
Query: 300 GFSNKNILGRGGFGKVYKGRLAD-GKLVAVKR-LKEERTSGGELQFQTEVKIISMAVHRN 357
+++ ++G G FG VY+ +L D G+LVA+K+ L+++R ELQ I+ H N
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ------IMRKLDHCN 93
Query: 358 LLRLYGFCTTVTEK--------LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS 409
++RL F + EK +L Y T VA + +LP + K
Sbjct: 94 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI---YVKLYMYQL 150
Query: 410 ARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440
R L+Y+H I HRD+K N+LLD D
Sbjct: 151 FRSLAYIHSF---GICHRDIKPQNLLLDPDT 178
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 18/144 (12%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVH 355
F +LG G FG VYKG + +G+ VA+K L+E + + E +++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARG 412
++ RL G C T T +L++ M G + +RE + ++ L+W + A+G
Sbjct: 77 PHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
++YL D +++HRD+ A N+L+
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLV 150
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 66/141 (46%), Gaps = 16/141 (11%)
Query: 306 ILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQTEVKIISMAVHRNL 358
++G G FG+V GRL KL VA+K LK T F E I+ H N+
Sbjct: 52 VVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108
Query: 359 LRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE 418
+RL G T ++V M NGS+ S LR+ + + + G A G+ YL
Sbjct: 109 IRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGMKYL-- 163
Query: 419 HCDPKIIHRDVKAANILLDED 439
D +HRD+ A NIL++ +
Sbjct: 164 -SDMGAVHRDLAARNILINSN 183
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 18/144 (12%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVH 355
F +LG G FG VYKG + +G+ VA+K L+E + + E +++ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARG 412
++ RL G C T T +L++ M G + +RE + ++ L+W + A+G
Sbjct: 78 PHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 130
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
++YL D +++HRD+ A N+L+
Sbjct: 131 MNYLE---DRRLVHRDLAARNVLV 151
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLYGFC 365
+G G FG VYKG+ VAVK L + +LQ F+ EV ++ H N+L G+
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 366 TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKII 425
T + +V + S+ L ++ + IA +A+G+ YLH II
Sbjct: 79 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---II 131
Query: 426 HRDVKAANILLDED 439
HRD+K+ NI L ED
Sbjct: 132 HRDLKSNNIFLHED 145
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 67/146 (45%), Gaps = 16/146 (10%)
Query: 301 FSNKNILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQTEVKIISMA 353
S ++G G FG+V GRL KL VA+K LK T F E I+
Sbjct: 18 ISIDKVVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 74
Query: 354 VHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGL 413
H N++RL G T ++V M NGS+ S LR+ + + + G A G+
Sbjct: 75 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGM 131
Query: 414 SYLHEHCDPKIIHRDVKAANILLDED 439
YL D +HRD+ A NIL++ +
Sbjct: 132 KYL---SDMGYVHRDLAARNILINSN 154
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 68/142 (47%), Gaps = 12/142 (8%)
Query: 301 FSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQT---EVKIISMAVHR 356
FS+ +G G FG VY R + + ++VA+K++ E ++Q EV+ + H
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE-KWQDIIKEVRFLQKLRHP 75
Query: 357 NLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYL 416
N ++ G LV Y GS + L + PL + G+ +GL+YL
Sbjct: 76 NTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKK---PLQEVEIAAVTHGALQGLAYL 131
Query: 417 HEHCDPKIIHRDVKAANILLDE 438
H H +IHRDVKA NILL E
Sbjct: 132 HSH---NMIHRDVKAGNILLSE 150
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 18/144 (12%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVH 355
F +LG G FG VYKG + +G+ VA+K L+E + + E +++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARG 412
++ RL G C T T +L++ M G + +RE + ++ L+W + A+G
Sbjct: 80 PHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
++YL D +++HRD+ A N+L+
Sbjct: 133 MNYLE---DRRLVHRDLAARNVLV 153
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 22/151 (14%)
Query: 300 GFSNKNILGRGGFGKVYKGRLAD-GKLVAVKR-LKEERTSGGELQFQTEVKIISMAVHRN 357
+++ ++G G FG VY+ +L D G+LVA+K+ L+++R ELQ I+ H N
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ------IMRKLDHCN 78
Query: 358 LLRLYGFCTTVTEK--------LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS 409
++RL F + EK +L Y T VA + +LP + K
Sbjct: 79 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI---YVKLYMYQL 135
Query: 410 ARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440
R L+Y+H I HRD+K N+LLD D
Sbjct: 136 FRSLAYIHSF---GICHRDIKPQNLLLDPDT 163
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 18/144 (12%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVH 355
F +LG G FG VYKG + +G+ VA+K L+E + + E +++ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARG 412
++ RL G C T T +L++ M G + +RE + ++ L+W + A+G
Sbjct: 81 PHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 133
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
++YL D +++HRD+ A N+L+
Sbjct: 134 MNYLE---DRRLVHRDLAARNVLV 154
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 18/144 (12%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVH 355
F +LG G FG VYKG + +G+ VA+K L+E + + E +++ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARG 412
++ RL G C T T +L++ M G + +RE + ++ L+W + A+G
Sbjct: 81 PHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 133
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
++YL D +++HRD+ A N+L+
Sbjct: 134 MNYLE---DRRLVHRDLAARNVLV 154
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 18/144 (12%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVH 355
F +LG G FG VYKG + +G+ VA+K L+E + + E +++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARG 412
++ RL G C T T +L++ M G + +RE + ++ L+W + A+G
Sbjct: 79 PHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
++YL D +++HRD+ A N+L+
Sbjct: 132 MNYLE---DRRLVHRDLAARNVLV 152
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 18/144 (12%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVH 355
F +LG G FG VYKG + +G+ VA+K L+E + + E +++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARG 412
++ RL G C T T +L++ M G + +RE + ++ L+W + A+G
Sbjct: 79 PHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
++YL D +++HRD+ A N+L+
Sbjct: 132 MNYLE---DRRLVHRDLAARNVLV 152
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 18/144 (12%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVH 355
F +LG G FG VYKG + +G+ VA+K L+E + + E +++ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARG 412
++ RL G C T T +L++ M G + +RE + ++ L+W + A+G
Sbjct: 78 PHVCRLLGICLTSTVQLIMQ-LMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKG 130
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
++YL D +++HRD+ A N+L+
Sbjct: 131 MNYLE---DRRLVHRDLAARNVLV 151
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 18/144 (12%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVH 355
F +LG G FG VYKG + +G+ VA+K L+E + + E +++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARG 412
++ RL G C T T +L++ M G + +RE + ++ L+W + A+G
Sbjct: 79 PHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
++YL D +++HRD+ A N+L+
Sbjct: 132 MNYLE---DRRLVHRDLAARNVLV 152
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 74/148 (50%), Gaps = 19/148 (12%)
Query: 307 LGRGGFGKVYKG------RLADGKLVAVKRLKEERTSGGELQFQTEVKI-ISMAVHRNLL 359
LGRG FG+V + + A + VAVK LKE T +E+KI I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 360 RLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPL-----DWPTRKKIALGS---A 410
L G CT L+V + G++++ LR +++ P D+ T + + S A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDE 438
+G+ +L K IHRD+ A NILL E
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSE 179
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 22/150 (14%)
Query: 300 GFSNKNILGRGGFGKVYKGRLAD-GKLVAVKR-LKEERTSGGELQFQTEVKIISMAVHRN 357
+++ ++G G FG VY+ +L D G+LVA+K+ L+++R ELQ I+ H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ------IMRKLDHCN 86
Query: 358 LLRLYGFCTTVTEK--------LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS 409
++RL F + EK +L Y T VA + +LP + K
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI---YVKLYMYQL 143
Query: 410 ARGLSYLHEHCDPKIIHRDVKAANILLDED 439
R L+Y+H I HRD+K N+LLD D
Sbjct: 144 FRSLAYIHSF---GICHRDIKPQNLLLDPD 170
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLYGFC 365
+G G FG VYKG+ VAVK L + +LQ F+ EV ++ H N+L G+
Sbjct: 36 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 366 TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKII 425
T + +V + S+ L ++ + IA +A+G+ YLH II
Sbjct: 94 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---II 146
Query: 426 HRDVKAANILLDED 439
HRD+K+ NI L ED
Sbjct: 147 HRDLKSNNIFLHED 160
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 22/150 (14%)
Query: 300 GFSNKNILGRGGFGKVYKGRLAD-GKLVAVKR-LKEERTSGGELQFQTEVKIISMAVHRN 357
+++ ++G G FG VY+ +L D G+LVA+K+ L+++R ELQ I+ H N
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ------IMRKLDHCN 79
Query: 358 LLRLYGFCTTVTEK--------LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS 409
++RL F + EK +L Y T VA + +LP + K
Sbjct: 80 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI---YVKLYMYQL 136
Query: 410 ARGLSYLHEHCDPKIIHRDVKAANILLDED 439
R L+Y+H I HRD+K N+LLD D
Sbjct: 137 FRSLAYIHSF---GICHRDIKPQNLLLDPD 163
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 18/144 (12%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGKLV----AVKRLKEERTSGGELQFQTEVKIISMAVH 355
F +LG G FG VYKG + +G+ V A+K L+E + + E +++ +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARG 412
++ RL G C T T +L+ M G + +RE + ++ L+W + A+G
Sbjct: 71 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 123
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
++YL D +++HRD+ A N+L+
Sbjct: 124 MNYLE---DRRLVHRDLAARNVLV 144
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 65/142 (45%), Gaps = 9/142 (6%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLL 359
F+ +G+G FG+V+KG K+VA+K + E Q E+ ++S +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH 419
+ YG T+ ++ Y+ GS L PLD I +GL YLH
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE 138
Query: 420 CDPKIIHRDVKAANILLDEDAD 441
K IHRD+KAAN+LL E +
Sbjct: 139 ---KKIHRDIKAANVLLSEHGE 157
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 65/142 (45%), Gaps = 9/142 (6%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLL 359
F+ +G+G FG+V+KG K+VA+K + E Q E+ ++S +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH 419
+ YG T+ ++ Y+ GS L PLD I +GL YLH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE 123
Query: 420 CDPKIIHRDVKAANILLDEDAD 441
K IHRD+KAAN+LL E +
Sbjct: 124 ---KKIHRDIKAANVLLSEHGE 142
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 66/141 (46%), Gaps = 16/141 (11%)
Query: 306 ILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQTEVKIISMAVHRNL 358
++G G FG+V GRL KL VA+K LK T F E I+ H N+
Sbjct: 52 VVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108
Query: 359 LRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE 418
+RL G T ++V M NGS+ S LR+ + + + G A G+ YL
Sbjct: 109 IRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGMKYL-- 163
Query: 419 HCDPKIIHRDVKAANILLDED 439
D +HRD+ A NIL++ +
Sbjct: 164 -SDMGYVHRDLAARNILINSN 183
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 65/142 (45%), Gaps = 9/142 (6%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLL 359
F+ +G+G FG+V+KG K+VA+K + E Q E+ ++S +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH 419
+ YG T+ ++ Y+ GS L PLD I +GL YLH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE 123
Query: 420 CDPKIIHRDVKAANILLDEDAD 441
K IHRD+KAAN+LL E +
Sbjct: 124 ---KKIHRDIKAANVLLSEHGE 142
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 18/144 (12%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVH 355
F +LG G FG VYKG + +G+ VA+K L+E + + E +++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARG 412
++ RL G C T T +L+ M G + +RE + ++ L+W + A+G
Sbjct: 77 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
++YL D +++HRD+ A N+L+
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLV 150
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG G FG V G+ VA+K +KE S E +F E K++ H L++LYG CT
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIAL--GSARGLSYLHEHCDPKI 424
++ YM NG + + LRE + T++ + + + YL +
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRF-----QTQQLLEMCKDVCEAMEYLE---SKQF 126
Query: 425 IHRDVKAANILLDEDA 440
+HRD+ A N L+++
Sbjct: 127 LHRDLAARNCLVNDQG 142
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 18/144 (12%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGKLV----AVKRLKEERTSGGELQFQTEVKIISMAVH 355
F +LG G FG VYKG + +G+ V A+K L+E + + E +++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARG 412
++ RL G C T T +L+ M G + +RE + ++ L+W + A+G
Sbjct: 77 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
++YL D +++HRD+ A N+L+
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLV 150
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 18/144 (12%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVH 355
F +LG G FG VYKG + +G+ VA+K L+E + + E +++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARG 412
++ RL G C T T +L+ M G + +RE + ++ L+W + A+G
Sbjct: 79 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
++YL D +++HRD+ A N+L+
Sbjct: 132 MNYLE---DRRLVHRDLAARNVLV 152
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 18/139 (12%)
Query: 307 LGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLYGF 364
LG G +G VYK G++VA+K++ E +LQ E+ I+ ++++ YG
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVE----SDLQEIIKEISIMQQCDSPHVVKYYGS 92
Query: 365 CTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIAL---GSARGLSYLHEHCD 421
T+ +V Y GSV+ +R R +L T +IA + +GL YLH
Sbjct: 93 YFKNTDLWIVMEYCGAGSVSDIIRLRNKTL------TEDEIATILQSTLKGLEYLHFM-- 144
Query: 422 PKIIHRDVKAANILLDEDA 440
+ IHRD+KA NILL+ +
Sbjct: 145 -RKIHRDIKAGNILLNTEG 162
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 18/144 (12%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVH 355
F +LG G FG VYKG + +G+ VA+K L+E + + E +++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARG 412
++ RL G C T T +L+ M G + +RE + ++ L+W + A+G
Sbjct: 77 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
++YL D +++HRD+ A N+L+
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLV 150
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 12/134 (8%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG G FG V G+ VA+K +KE S E +F E K++ H L++LYG CT
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIAL--GSARGLSYLHEHCDPKI 424
++ YM NG + + LRE + T++ + + + YL +
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREMRHRF-----QTQQLLEMCKDVCEAMEYLE---SKQF 121
Query: 425 IHRDVKAANILLDE 438
+HRD+ A N L+++
Sbjct: 122 LHRDLAARNCLVND 135
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 18/144 (12%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVH 355
F +LG G FG VYKG + +G+ VA+K L+E + + E +++ +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARG 412
++ RL G C T T +L+ M G + +RE + ++ L+W + A+G
Sbjct: 83 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 135
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
++YL D +++HRD+ A N+L+
Sbjct: 136 MNYLE---DRRLVHRDLAARNVLV 156
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 18/144 (12%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVH 355
F +LG G FG VYKG + +G+ VA+K L+E + + E +++ +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARG 412
++ RL G C T T +L+ M G + +RE + ++ L+W + A+G
Sbjct: 87 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 139
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
++YL D +++HRD+ A N+L+
Sbjct: 140 MNYLE---DRRLVHRDLAARNVLV 160
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 12/134 (8%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG G FG V G+ VA+K +KE S E +F E K++ H L++LYG CT
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIAL--GSARGLSYLHEHCDPKI 424
++ YM NG + + LRE + T++ + + + YL +
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREMRHRF-----QTQQLLEMCKDVCEAMEYLE---SKQF 125
Query: 425 IHRDVKAANILLDE 438
+HRD+ A N L+++
Sbjct: 126 LHRDLAARNCLVND 139
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 22/151 (14%)
Query: 307 LGRGGFGKVYKG------RLADGKLVAVKRLKEERTSGGELQFQTEVKI-ISMAVHRNLL 359
LGRG FG+V + + A + VAVK LKE T +E+KI I + H N++
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 360 RLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPLDWP--------TRKKIALGS- 409
L G CT L+V + G++++ LR +++ P P T + + S
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 410 --ARGLSYLHEHCDPKIIHRDVKAANILLDE 438
A+G+ +L K IHRD+ A NILL E
Sbjct: 156 QVAKGMEFLASR---KCIHRDLAARNILLSE 183
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 18/144 (12%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVH 355
F +LG G FG VYKG + +G+ VA+K L+E + + E +++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARG 412
++ RL G C T T +L+ M G + +RE + ++ L+W + A+G
Sbjct: 77 PHVCRLLGICLTSTVQLITQ-LMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
++YL D +++HRD+ A N+L+
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLV 150
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 18/144 (12%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVH 355
F +LG G FG VYKG + +G+ VA+K L+E + + E +++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARG 412
++ RL G C T T +L+ M G + +RE + ++ L+W + A+G
Sbjct: 80 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
++YL D +++HRD+ A N+L+
Sbjct: 133 MNYLE---DRRLVHRDLAARNVLV 153
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 304 KNILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
K+ LG G +G+VY+G L VAVK LKE+ E F E ++ H NL++L
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 80
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRE--RQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
G CT ++ +MT G++ LRE RQ + L A +S E+
Sbjct: 81 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYL 132
Query: 421 DPK-IIHRDVKAANILLDED 439
+ K IHRD+ A N L+ E+
Sbjct: 133 EKKNFIHRDLAARNCLVGEN 152
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 15/184 (8%)
Query: 260 YWRRTRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGR 319
Y++ P F+ AE + + G+ R RE++ + + I+G G G+V GR
Sbjct: 15 YFQGKLPEPQFY---AEPHTYEEPGRAGRSFTREIEASR--IHIEKIIGSGDSGEVCYGR 69
Query: 320 L-ADGKL---VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375
L G+ VA+K LK T F +E I+ H N++RL G T ++V
Sbjct: 70 LRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVT 129
Query: 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANIL 435
YM NGS+ + LR + + G G+ YL D +HRD+ A N+L
Sbjct: 130 EYMENGSLDTFLRTHDGQFTIMQL---VGMLRGVGAGMRYL---SDLGYVHRDLAARNVL 183
Query: 436 LDED 439
+D +
Sbjct: 184 VDSN 187
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 18/144 (12%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVH 355
F +LG G FG VYKG + +G+ VA+K L+E + + E +++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARG 412
++ RL G C T T +L+ M G + +RE + ++ L+W + A+G
Sbjct: 80 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
++YL D +++HRD+ A N+L+
Sbjct: 133 MNYLE---DRRLVHRDLAARNVLV 153
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 18/144 (12%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVH 355
F +LG G FG VYKG + +G+ VA+K L+E + + E +++ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARG 412
++ RL G C T T +L+ M G + +RE + ++ L+W + A+G
Sbjct: 84 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
++YL D +++HRD+ A N+L+
Sbjct: 137 MNYLE---DRRLVHRDLAARNVLV 157
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 18/144 (12%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVH 355
F +LG G FG VYKG + +G+ VA+K L+E + + E +++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARG 412
++ RL G C T T +L+ M G + +RE + ++ L+W + A+G
Sbjct: 79 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
++YL D +++HRD+ A N+L+
Sbjct: 132 MNYLE---DRRLVHRDLAARNVLV 152
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 22/150 (14%)
Query: 300 GFSNKNILGRGGFGKVYKGRLAD-GKLVAVKR-LKEERTSGGELQFQTEVKIISMAVHRN 357
+++ ++G G FG VY+ +L D G+LVA+K+ L+++R ELQ I+ H N
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ------IMRKLDHCN 102
Query: 358 LLRLYGFCTTVTEK--------LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS 409
++RL F + EK +L Y T VA + +LP + K
Sbjct: 103 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI---YVKLYMYQL 159
Query: 410 ARGLSYLHEHCDPKIIHRDVKAANILLDED 439
R L+Y+H I HRD+K N+LLD D
Sbjct: 160 FRSLAYIHSF---GICHRDIKPQNLLLDPD 186
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 18/140 (12%)
Query: 305 NILGRGGFGKVYKG-RLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLL 359
+LG G FG VYKG + DG+ VA+K L+E + + E +++ +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRE---RQSSLPPLDWPTRKKIALGSARGLSYL 416
RL G C T T + LV M G + +RE R S L+W + A+G+SYL
Sbjct: 83 RLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNW------CMQIAKGMSYL 135
Query: 417 HEHCDPKIIHRDVKAANILL 436
D +++HRD+ A N+L+
Sbjct: 136 E---DVRLVHRDLAARNVLV 152
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 15/184 (8%)
Query: 260 YWRRTRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGR 319
Y++ P F+ AE + + G+ R RE++ + + I+G G G+V GR
Sbjct: 15 YFQGKLPEPQFY---AEPHTYEEPGRAGRSFTREIEASR--IHIEKIIGSGDSGEVCYGR 69
Query: 320 L-ADGKL---VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375
L G+ VA+K LK T F +E I+ H N++RL G T ++V
Sbjct: 70 LRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVT 129
Query: 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANIL 435
YM NGS+ + LR + + G G+ YL D +HRD+ A N+L
Sbjct: 130 EYMENGSLDTFLRTHDGQFTIMQL---VGMLRGVGAGMRYL---SDLGYVHRDLAARNVL 183
Query: 436 LDED 439
+D +
Sbjct: 184 VDSN 187
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 304 KNILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
K+ LG G +G+VY+G L VAVK LKE+ E F E ++ H NL++L
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 75
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRE--RQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
G CT ++ +MT G++ LRE RQ + L A +S E+
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYL 127
Query: 421 DPK-IIHRDVKAANILLDED 439
+ K IHRD+ A N L+ E+
Sbjct: 128 EKKNFIHRDLAARNCLVGEN 147
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 18/144 (12%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVH 355
F +LG G FG VYKG + +G+ VA+K L+E + + E +++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARG 412
++ RL G C T T +L+ M G + +RE + ++ L+W + A+G
Sbjct: 80 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
++YL D +++HRD+ A N+L+
Sbjct: 133 MNYLE---DRRLVHRDLAARNVLV 153
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 304 KNILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
K+ LG G +G+VY+G L VAVK LKE+ E F E ++ H NL++L
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 80
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRE--RQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
G CT ++ +MT G++ LRE RQ + L A +S E+
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYL 132
Query: 421 DPK-IIHRDVKAANILLDED 439
+ K IHRD+ A N L+ E+
Sbjct: 133 EKKNFIHRDLAARNCLVGEN 152
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 22/149 (14%)
Query: 301 FSNKNILGRGGFGKVYKGRLAD-GKLVAVKR-LKEERTSGGELQFQTEVKIISMAVHRNL 358
+++ ++G G FG VY+ +L D G+LVA+K+ L+++R ELQ I+ H N+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ------IMRKLDHCNI 109
Query: 359 LRLYGFCTTVTEK--------LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSA 410
+RL F + EK +L Y T VA + +LP + K
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI---YVKLYMYQLF 166
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDED 439
R L+Y+H I HRD+K N+LLD D
Sbjct: 167 RSLAYIHSF---GICHRDIKPQNLLLDPD 192
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 22/149 (14%)
Query: 301 FSNKNILGRGGFGKVYKGRLAD-GKLVAVKR-LKEERTSGGELQFQTEVKIISMAVHRNL 358
+++ ++G G FG VY+ +L D G+LVA+K+ L+++R ELQ I+ H N+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ------IMRKLDHCNI 109
Query: 359 LRLYGFCTTVTEK--------LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSA 410
+RL F + EK +L Y T VA + +LP + K
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI---YVKLYMYQLF 166
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDED 439
R L+Y+H I HRD+K N+LLD D
Sbjct: 167 RSLAYIHSF---GICHRDIKPQNLLLDPD 192
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 17/160 (10%)
Query: 293 ELQVATDGFSNKNILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQT 345
E +VA + + LG+G FG VY+G +A G + VA+K + E + ++F
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 346 EVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSL---PPLDWPTR 402
E ++ +++RL G + L++ MT G + S LR + + P L P+
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 403 KK---IALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
K +A A G++YL+ + K +HRD+ A N + ED
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAED 161
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLYGFC 365
+G G FG VYKG+ VAVK L + +LQ F+ EV ++ H N+L G+
Sbjct: 43 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 366 TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKII 425
T + +V + S+ L ++ + IA +A+G+ YLH II
Sbjct: 101 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---II 153
Query: 426 HRDVKAANILLDED 439
HRD+K+ NI L ED
Sbjct: 154 HRDLKSNNIFLHED 167
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLYGFC 365
+G G FG VYKG+ VAVK L + +LQ F+ EV ++ H N+L G+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 366 TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKII 425
T + +V + S+ L ++ + IA +A+G+ YLH II
Sbjct: 102 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---II 154
Query: 426 HRDVKAANILLDED 439
HRD+K+ NI L ED
Sbjct: 155 HRDLKSNNIFLHED 168
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 18/144 (12%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVH 355
F +LG G FG VYKG + +G+ VA+K L+E + + E +++ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARG 412
++ RL G C T T +L+ M G + +RE + ++ L+W + A+G
Sbjct: 84 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
++YL D +++HRD+ A N+L+
Sbjct: 137 MNYLE---DRRLVHRDLAARNVLV 157
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 304 KNILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
K+ LG G +G+VY+G L VAVK LKE+ E F E ++ H NL++L
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 75
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRE--RQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
G CT ++ +MT G++ LRE RQ + L A +S E+
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYL 127
Query: 421 DPK-IIHRDVKAANILLDED 439
+ K IHRD+ A N L+ E+
Sbjct: 128 EKKNFIHRDLAARNCLVGEN 147
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 304 KNILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
K+ LG G +G+VY+G L VAVK LKE+ E F E ++ H NL++L
Sbjct: 19 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 76
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRE--RQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
G CT ++ +MT G++ LRE RQ + L A +S E+
Sbjct: 77 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYL 128
Query: 421 DPK-IIHRDVKAANILLDED 439
+ K IHRD+ A N L+ E+
Sbjct: 129 EKKNFIHRDLAARNCLVGEN 148
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG G FG V G+ VA+K +KE S E +F E K++ H L++LYG CT
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIAL--GSARGLSYLHEHCDPKI 424
++ YM NG + + LRE + T++ + + + YL +
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRF-----QTQQLLEMCKDVCEAMEYLE---SKQF 126
Query: 425 IHRDVKAANILLDEDA 440
+HRD+ A N L+++
Sbjct: 127 LHRDLAARNCLVNDQG 142
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 304 KNILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
K+ LG G +G+VY+G L VAVK LKE+ E F E ++ H NL++L
Sbjct: 22 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 79
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRE--RQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
G CT ++ +MT G++ LRE RQ + L A +S E+
Sbjct: 80 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYL 131
Query: 421 DPK-IIHRDVKAANILLDED 439
+ K IHRD+ A N L+ E+
Sbjct: 132 EKKNFIHRDLAARNCLVGEN 151
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 22/149 (14%)
Query: 301 FSNKNILGRGGFGKVYKGRLAD-GKLVAVKR-LKEERTSGGELQFQTEVKIISMAVHRNL 358
+++ ++G G FG VY+ +L D G+LVA+K+ L+++R ELQ I+ H N+
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ------IMRKLDHCNI 111
Query: 359 LRLYGFCTTVTEK--------LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSA 410
+RL F + EK +L Y T VA + +LP + K
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI---YVKLYMYQLF 168
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDED 439
R L+Y+H I HRD+K N+LLD D
Sbjct: 169 RSLAYIHSF---GICHRDIKPQNLLLDPD 194
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 304 KNILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
K+ LG G +G+VY+G L VAVK LKE+ E F E ++ H NL++L
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 80
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRE--RQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
G CT ++ +MT G++ LRE RQ + L A +S E+
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYL 132
Query: 421 DPK-IIHRDVKAANILLDED 439
+ K IHRD+ A N L+ E+
Sbjct: 133 EKKNFIHRDLAARNCLVGEN 152
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 304 KNILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
K+ LG G +G+VY+G L VAVK LKE+ E F E ++ H NL++L
Sbjct: 19 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 76
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRE--RQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
G CT ++ +MT G++ LRE RQ + L A +S E+
Sbjct: 77 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYL 128
Query: 421 DPK-IIHRDVKAANILLDED 439
+ K IHRD+ A N L+ E+
Sbjct: 129 EKKNFIHRDLAARNCLVGEN 148
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLYGFC 365
+G G FG VYKG+ VAVK L + +LQ F+ EV ++ H N+L G+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 366 TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKII 425
T + +V + S+ L ++ + IA +A+G+ YLH II
Sbjct: 102 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---II 154
Query: 426 HRDVKAANILLDED 439
HRD+K+ NI L ED
Sbjct: 155 HRDLKSNNIFLHED 168
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 304 KNILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
K+ LG G +G+VY+G L VAVK LKE+ E F E ++ H NL++L
Sbjct: 20 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 77
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRE--RQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
G CT ++ +MT G++ LRE RQ + L A +S E+
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYL 129
Query: 421 DPK-IIHRDVKAANILLDED 439
+ K IHRD+ A N L+ E+
Sbjct: 130 EKKNFIHRDLAARNCLVGEN 149
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG G FG V G+ VA+K +KE S E +F E K++ H L++LYG CT
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIAL--GSARGLSYLHEHCDPKI 424
++ YM NG + + LRE + T++ + + + YL +
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREMRHRF-----QTQQLLEMCKDVCEAMEYLE---SKQF 132
Query: 425 IHRDVKAANILLDEDA 440
+HRD+ A N L+++
Sbjct: 133 LHRDLAARNCLVNDQG 148
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 10/135 (7%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG G FG V G+ VA+K +KE S E +F E K++ H L++LYG CT
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK-II 425
++ YM NG + + LRE + + + L + + E+ + K +
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRF-------QTQQLLEMCKDVCEAMEYLESKQFL 142
Query: 426 HRDVKAANILLDEDA 440
HRD+ A N L+++
Sbjct: 143 HRDLAARNCLVNDQG 157
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 21/150 (14%)
Query: 307 LGRGGFGKVYKG------RLADGKLVAVKRLKEERTSGGELQFQTEVKI-ISMAVHRNLL 359
LGRG FG+V + + A + VAVK LKE T +E+KI I + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 360 RLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPL-------DWPTRKKIALGS-- 409
L G CT L+V + G++++ LR +++ P D+ T + + S
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 410 -ARGLSYLHEHCDPKIIHRDVKAANILLDE 438
A+G+ +L K IHRD+ A NILL E
Sbjct: 157 VAKGMEFLASR---KXIHRDLAARNILLSE 183
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 22/149 (14%)
Query: 301 FSNKNILGRGGFGKVYKGRLAD-GKLVAVKR-LKEERTSGGELQFQTEVKIISMAVHRNL 358
+++ ++G G FG VY+ +L D G+LVA+K+ L+++R ELQ I+ H N+
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ------IMRKLDHCNI 113
Query: 359 LRLYGFCTTVTEK--------LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSA 410
+RL F + EK +L Y T VA + +LP + K
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI---YVKLYMYQLF 170
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDED 439
R L+Y+H I HRD+K N+LLD D
Sbjct: 171 RSLAYIHSF---GICHRDIKPQNLLLDPD 196
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 304 KNILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
K+ LG G +G+VY+G L VAVK LKE+ E F E ++ H NL++L
Sbjct: 31 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 88
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRE--RQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
G CT ++ +MT G++ LRE RQ + L A +S E+
Sbjct: 89 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYL 140
Query: 421 DPK-IIHRDVKAANILLDED 439
+ K IHRD+ A N L+ E+
Sbjct: 141 EKKNFIHRDLAARNCLVGEN 160
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 304 KNILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
K+ LG G +G+VY+G L VAVK LKE+ E F E ++ H NL++L
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 75
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRE--RQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
G CT ++ +MT G++ LRE RQ + L A +S E+
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAMEYL 127
Query: 421 DPK-IIHRDVKAANILLDED 439
+ K IHRD+ A N L+ E+
Sbjct: 128 EKKNFIHRDLAARNCLVGEN 147
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 10/135 (7%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG G FG V G+ VA+K +KE S E +F E K++ H L++LYG CT
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK-II 425
++ YM NG + + LRE + + + L + + E+ + K +
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRF-------QTQQLLEMCKDVCEAMEYLESKQFL 142
Query: 426 HRDVKAANILLDEDA 440
HRD+ A N L+++
Sbjct: 143 HRDLAARNCLVNDQG 157
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 304 KNILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
K+ LG G +G+VY+G L VAVK LKE+ E F E ++ H NL++L
Sbjct: 20 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 77
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRE--RQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
G CT ++ +MT G++ LRE RQ + L A +S E+
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYL 129
Query: 421 DPK-IIHRDVKAANILLDED 439
+ K IHRD+ A N L+ E+
Sbjct: 130 EKKNFIHRDLAARNCLVGEN 149
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 11/138 (7%)
Query: 307 LGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLYGF 364
+G+G F KV R + GK VAVK + + + + LQ EV+I+ + H N+++L+
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 365 CTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK- 423
T LV Y + G V L W ++K A R + ++C K
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAH-------GW-MKEKEARAKFRQIVSAVQYCHQKF 126
Query: 424 IIHRDVKAANILLDEDAD 441
I+HRD+KA N+LLD D +
Sbjct: 127 IVHRDLKAENLLLDADMN 144
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 22/149 (14%)
Query: 301 FSNKNILGRGGFGKVYKGRLAD-GKLVAVKR-LKEERTSGGELQFQTEVKIISMAVHRNL 358
+++ ++G G FG VY+ +L D G+LVA+K+ L+++R ELQ I+ H N+
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ------IMRKLDHCNI 154
Query: 359 LRLYGFCTTVTEK--------LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSA 410
+RL F + EK +L Y T VA + +LP + K
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI---YVKLYMYQLF 211
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDED 439
R L+Y+H I HRD+K N+LLD D
Sbjct: 212 RSLAYIHSF---GICHRDIKPQNLLLDPD 237
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 304 KNILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
K+ LG G +G+VY+G L VAVK LKE+ E F E ++ H NL++L
Sbjct: 20 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 77
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRE--RQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
G CT ++ +MT G++ LRE RQ + L A +S E+
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYL 129
Query: 421 DPK-IIHRDVKAANILLDED 439
+ K IHRD+ A N L+ E+
Sbjct: 130 EKKNFIHRDLAARNCLVGEN 149
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 304 KNILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
K+ LG G +G+VY+G L VAVK LKE+ E F E ++ H NL++L
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 75
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRE--RQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
G CT ++ +MT G++ LRE RQ + L A +S E+
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAMEYL 127
Query: 421 DPK-IIHRDVKAANILLDED 439
+ K IHRD+ A N L+ E+
Sbjct: 128 EKKNFIHRDLAARNCLVGEN 147
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 18/144 (12%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVH 355
F +LG G FG VYKG + +G+ VA+K L+E + + E +++ +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARG 412
++ RL G C T T +L+ M G + +RE + ++ L+W + A G
Sbjct: 74 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAEG 126
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
++YL D +++HRD+ A N+L+
Sbjct: 127 MNYLE---DRRLVHRDLAARNVLV 147
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 304 KNILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
K+ LG G +G+VY+G L VAVK LKE+ E F E ++ H NL++L
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 80
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRE--RQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
G CT ++ +MT G++ LRE RQ + L A +S E+
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYL 132
Query: 421 DPK-IIHRDVKAANILLDED 439
+ K IHRD+ A N L+ E+
Sbjct: 133 EKKNFIHRDLAARNCLVGEN 152
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 7/137 (5%)
Query: 306 ILGR-GGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGF 364
I+G G FGKVYK + + ++A ++ + ++ + E+ I++ H N+++L
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 365 CTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI 424
++ + G+V + + E + PL + + + L+YLH D KI
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVMLELER---PLTESQIQVVCKQTLDALNYLH---DNKI 129
Query: 425 IHRDVKAANILLDEDAD 441
IHRD+KA NIL D D
Sbjct: 130 IHRDLKAGNILFTLDGD 146
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 304 KNILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
K+ LG G +G+VY+G L VAVK LKE+ E F E ++ H NL++L
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 80
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRE--RQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
G CT ++ +MT G++ LRE RQ + L A +S E+
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAMEYL 132
Query: 421 DPK-IIHRDVKAANILLDED 439
+ K IHRD+ A N L+ E+
Sbjct: 133 EKKNFIHRDLAARNCLVGEN 152
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 304 KNILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
K+ LG G +G+VY+G L VAVK LKE+ E F E ++ H NL++L
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 75
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRE--RQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
G CT ++ +MT G++ LRE RQ + L A +S E+
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAMEYL 127
Query: 421 DPK-IIHRDVKAANILLDED 439
+ K IHRD+ A N L+ E+
Sbjct: 128 EKKNFIHRDLAARNCLVGEN 147
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 60/132 (45%), Gaps = 7/132 (5%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG G FG+V+ G + VAVK LK S F E ++ H L+RLY T
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQ--AFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIH 426
++ YM GS+ L+ + L P + A G++Y+ IH
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERK---NYIH 133
Query: 427 RDVKAANILLDE 438
RD++AAN+L+ E
Sbjct: 134 RDLRAANVLVSE 145
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 23/152 (15%)
Query: 307 LGRGGFGKVYKG------RLADGKLVAVKRLKEERTSGGELQFQTEVKI-ISMAVHRNLL 359
LGRG FG+V + + A + VAVK LKE T +E+KI I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 360 RLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPL---------DWPTRKKIALGS 409
L G CT L+V + G++++ LR +++ P D+ T + + S
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 410 ---ARGLSYLHEHCDPKIIHRDVKAANILLDE 438
A+G+ +L K IHRD+ A NILL E
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSE 183
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 304 KNILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
K+ LG G +G+VY+G L VAVK LKE+ E F E ++ H NL++L
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 75
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRE--RQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
G CT ++ +MT G++ LRE RQ + L A +S E+
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAMEYL 127
Query: 421 DPK-IIHRDVKAANILLDED 439
+ K IHRD+ A N L+ E+
Sbjct: 128 EKKNFIHRDLAARNCLVGEN 147
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 12/149 (8%)
Query: 299 DGFSNKNILGRGGFGKVYKGRLADGK-LVAVKRLKEERTSGGELQFQTEVKIISMAVHRN 357
D + + ++G G V A K VA+KR+ E+ + E++ +S H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 358 LLRLYGFCTTVTEKLLVYPYMTNGSVASRLR------ERQSSLPPLDWPTRKKIALGSAR 411
++ Y E LV ++ GSV ++ E +S + LD T I
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV--LDESTIATILREVLE 127
Query: 412 GLSYLHEHCDPKIIHRDVKAANILLDEDA 440
GL YLH++ IHRDVKA NILL ED
Sbjct: 128 GLEYLHKNGQ---IHRDVKAGNILLGEDG 153
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 23/152 (15%)
Query: 307 LGRGGFGKVYKG------RLADGKLVAVKRLKEERTSGGELQFQTEVKI-ISMAVHRNLL 359
LGRG FG+V + + A + VAVK LKE T +E+KI I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 360 RLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPL---------DWPTRKKIALGS 409
L G CT L+V + G++++ LR +++ P D+ T + + S
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 410 ---ARGLSYLHEHCDPKIIHRDVKAANILLDE 438
A+G+ +L K IHRD+ A NILL E
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSE 183
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 20/149 (13%)
Query: 300 GFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNL 358
+++ ++G G FG VY+ +L D G+LVA+K++ + G+ E++I+ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLDHCNI 75
Query: 359 LRLYGFCTTVTEK--------LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSA 410
+RL F + EK +L Y T VA + +LP + K
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVI---YVKLYMYQLF 132
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDED 439
R L+Y+H I HRD+K N+LLD D
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPD 158
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 304 KNILGRGGFGKVYKGRLADGKL---VAVKRLKEERTSGGELQFQTEVKII-SMAVHRNLL 359
++++G G FG+V K R+ L A+KR+KE + F E++++ + H N++
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQ------------SSLPPLDWPTRKKIAL 407
L G C L Y +G++ LR+ + S+ L A
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 408 GSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
ARG+ YL + + IHRD+ A NIL+ E+
Sbjct: 140 DVARGMDYLSQK---QFIHRDLAARNILVGEN 168
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 23/152 (15%)
Query: 307 LGRGGFGKVYKG------RLADGKLVAVKRLKEERTSGGELQFQTEVKI-ISMAVHRNLL 359
LGRG FG+V + + A + VAVK LKE T +E+KI I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 360 RLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPL---------DWPTRKKIALGS 409
L G CT L+V + G++++ LR +++ P D+ T + + S
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 410 ---ARGLSYLHEHCDPKIIHRDVKAANILLDE 438
A+G+ +L K IHRD+ A NILL E
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSE 174
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 15/163 (9%)
Query: 289 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLAD---GKL---VAVKRLKEERTSGGELQ 342
F E +V+ + + LG+G FG VY+G D G+ VAVK + E + ++
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 343 FQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLR------ERQSSLPP 396
F E ++ +++RL G + L+V M +G + S LR E PP
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 397 LDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
++A A G++YL+ K +HRD+ A N ++ D
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHD 166
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 304 KNILGRGGFGKVYKGRLADGKL---VAVKRLKEERTSGGELQFQTEVKII-SMAVHRNLL 359
++++G G FG+V K R+ L A+KR+KE + F E++++ + H N++
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQ------------SSLPPLDWPTRKKIAL 407
L G C L Y +G++ LR+ + S+ L A
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 408 GSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
ARG+ YL + + IHRD+ A NIL+ E+
Sbjct: 150 DVARGMDYLSQK---QFIHRDLAARNILVGEN 178
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 15/163 (9%)
Query: 289 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLAD---GKL---VAVKRLKEERTSGGELQ 342
F E +V+ + + LG+G FG VY+G D G+ VAVK + E + ++
Sbjct: 4 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 63
Query: 343 FQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLR------ERQSSLPP 396
F E ++ +++RL G + L+V M +G + S LR E PP
Sbjct: 64 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 123
Query: 397 LDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
++A A G++YL+ K +HRD+ A N ++ D
Sbjct: 124 PTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHD 163
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 23/152 (15%)
Query: 307 LGRGGFGKVYKG------RLADGKLVAVKRLKEERTSGGELQFQTEVKI-ISMAVHRNLL 359
LGRG FG+V + + A + VAVK LKE T +E+KI I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 360 RLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPL---------DWPTRKKIALGS 409
L G CT L+V + G++++ LR +++ P D+ T + + S
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 410 ---ARGLSYLHEHCDPKIIHRDVKAANILLDE 438
A+G+ +L K IHRD+ A NILL E
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSE 183
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 12/149 (8%)
Query: 299 DGFSNKNILGRGGFGKVYKGRLADGK-LVAVKRLKEERTSGGELQFQTEVKIISMAVHRN 357
D + + ++G G V A K VA+KR+ E+ + E++ +S H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 358 LLRLYGFCTTVTEKLLVYPYMTNGSVASRLR------ERQSSLPPLDWPTRKKIALGSAR 411
++ Y E LV ++ GSV ++ E +S + LD T I
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV--LDESTIATILREVLE 132
Query: 412 GLSYLHEHCDPKIIHRDVKAANILLDEDA 440
GL YLH++ IHRDVKA NILL ED
Sbjct: 133 GLEYLHKNGQ---IHRDVKAGNILLGEDG 158
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 15/163 (9%)
Query: 289 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLAD---GKL---VAVKRLKEERTSGGELQ 342
F E +V+ + + LG+G FG VY+G D G+ VAVK + E + ++
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 343 FQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLR------ERQSSLPP 396
F E ++ +++RL G + L+V M +G + S LR E PP
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 397 LDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
++A A G++YL+ K +HRD+ A N ++ D
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHD 166
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 15/163 (9%)
Query: 289 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLAD---GKL---VAVKRLKEERTSGGELQ 342
F E +V+ + + LG+G FG VY+G D G+ VAVK + E + ++
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 343 FQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLR------ERQSSLPP 396
F E ++ +++RL G + L+V M +G + S LR E PP
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 397 LDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
++A A G++YL+ K +HRD+ A N ++ D
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHD 166
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 9/142 (6%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLL 359
F+ +G+G FG+V+KG ++VA+K + E Q E+ ++S +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH 419
+ YG ++ ++ Y+ GS LR P D + +GL YLH
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAG-----PFDEFQIATMLKEILKGLDYLHSE 139
Query: 420 CDPKIIHRDVKAANILLDEDAD 441
K IHRD+KAAN+LL E D
Sbjct: 140 ---KKIHRDIKAANVLLSEQGD 158
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 23/152 (15%)
Query: 307 LGRGGFGKVYKG------RLADGKLVAVKRLKEERTSGGELQFQTEVKI-ISMAVHRNLL 359
LGRG FG+V + + A + VAVK LKE T +E+KI I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 360 RLYGFCTTVTEKLLVY-PYMTNGSVASRLRERQSSLPPL---------DWPTRKKIALGS 409
L G CT L+V + G++++ LR +++ P D+ T + + S
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 410 ---ARGLSYLHEHCDPKIIHRDVKAANILLDE 438
A+G+ +L K IHRD+ A NILL E
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSE 174
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 23/152 (15%)
Query: 307 LGRGGFGKVYKG------RLADGKLVAVKRLKEERTSGGELQFQTEVKI-ISMAVHRNLL 359
LGRG FG+V + + A + VAVK LKE T +E+KI I + H N++
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 360 RLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPL---------DWPTRKKIALGS 409
L G CT L+V + G++++ LR +++ P D+ T + + S
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 410 ---ARGLSYLHEHCDPKIIHRDVKAANILLDE 438
A+G+ +L K IHRD+ A NILL E
Sbjct: 192 FQVAKGMEFLASR---KCIHRDLAARNILLSE 220
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 23/152 (15%)
Query: 307 LGRGGFGKVYKG------RLADGKLVAVKRLKEERTSGGELQFQTEVKI-ISMAVHRNLL 359
LGRG FG+V + + A + VAVK LKE T +E+KI I + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 360 RLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPL---------DWPTRKKIALGS 409
L G CT L+V + G++++ LR +++ P D+ T + + S
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 410 ---ARGLSYLHEHCDPKIIHRDVKAANILLDE 438
A+G+ +L K IHRD+ A NILL E
Sbjct: 157 FQVAKGMEFLASR---KCIHRDLAARNILLSE 185
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 23/152 (15%)
Query: 307 LGRGGFGKVYKG------RLADGKLVAVKRLKEERTSGGELQFQTEVKI-ISMAVHRNLL 359
LGRG FG+V + + A + VAVK LKE T +E+KI I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 360 RLYGFCTTVTEKLLVY-PYMTNGSVASRLRERQSSLPPL---------DWPTRKKIALGS 409
L G CT L+V + G++++ LR +++ P D+ T + + S
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 410 ---ARGLSYLHEHCDPKIIHRDVKAANILLDE 438
A+G+ +L K IHRD+ A NILL E
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSE 174
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 19/151 (12%)
Query: 304 KNILGRGGFGKVYKGRL------ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRN 357
K LG G FGKV+ D LVAVK LK+ + F E ++++ H +
Sbjct: 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-SDNARKDFHREAELLTNLQHEH 76
Query: 358 LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSL-------PPLDWPTRK--KIALG 408
+++ YG C ++V+ YM +G + LR PP + + IA
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 409 SARGLSYLHEHCDPKIIHRDVKAANILLDED 439
A G+ YL +HRD+ N L+ E+
Sbjct: 137 IAAGMVYL---ASQHFVHRDLATRNCLVGEN 164
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
Query: 293 ELQVATDGFSNKNILGRGGFGKVYKGRLAD---GKL---VAVKRLKEERTSGGELQFQTE 346
E +V+ + + LG+G FG VY+G D G+ VAVK + E + ++F E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 347 VKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLR------ERQSSLPPLDWP 400
++ +++RL G + L+V M +G + S LR E PP
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 401 TRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
++A A G++YL+ K +HRD+ A N ++ D
Sbjct: 131 EMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHD 166
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 23/152 (15%)
Query: 307 LGRGGFGKVYKG------RLADGKLVAVKRLKEERTSGGELQFQTEVKI-ISMAVHRNLL 359
LGRG FG+V + + A + VAVK LKE T +E+KI I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 360 RLYGFCTTVTEKLLVY-PYMTNGSVASRLRERQSSLPPL---------DWPTRKKIALGS 409
L G CT L+V + G++++ LR +++ P D+ T + + S
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 410 ---ARGLSYLHEHCDPKIIHRDVKAANILLDE 438
A+G+ +L K IHRD+ A NILL E
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSE 174
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 20/150 (13%)
Query: 300 GFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNL 358
+++ ++G G FG VY+ +L D G+LVA+K++ + G+ E++I+ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLDHCNI 75
Query: 359 LRLYGFCTTVTEK--------LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSA 410
+RL F + EK +L Y T VA + +LP + K
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI---YVKLYMYQLF 132
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDA 440
R L+Y+H I HRD+K N+LLD D
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDT 159
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 20/149 (13%)
Query: 300 GFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNL 358
+++ ++G G FG VY+ +L D G+LVA+K++ + G+ E++I+ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLDHCNI 75
Query: 359 LRLYGFCTTVTEK--------LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSA 410
+RL F + EK +L Y T VA + +LP + K
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI---YVKLYMYQLF 132
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDED 439
R L+Y+H I HRD+K N+LLD D
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPD 158
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 15/146 (10%)
Query: 306 ILGRGGFGKVYKGRL--ADGK--LVAVKRLKEERTSGGEL-QFQTEVKIISMAVHRNLLR 360
ILG G FG V +G L DG VAVK +K + +S E+ +F +E + H N++R
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 361 LYGFCTTVTEK-----LLVYPYMTNGSVASRLRERQSSLPPLDWP--TRKKIALGSARGL 413
L G C ++ + +++ P+M G + + L + P P T K + A G+
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 414 SYLHEHCDPKIIHRDVKAANILLDED 439
YL +HRD+ A N +L +D
Sbjct: 161 EYLSNR---NFLHRDLAARNCMLRDD 183
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 64/136 (47%), Gaps = 13/136 (9%)
Query: 307 LGRGGFGKVYKGRL--ADGKLV--AVKRLKEERTSGGEL--QFQTEVKIISMAVHRNLLR 360
LG G FG V +G GK V AVK LK + S E F EV + HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
LYG T K +V GS+ RLR+ Q T + A+ A G+ YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGYLESK- 130
Query: 421 DPKIIHRDVKAANILL 436
+ IHRD+ A N+LL
Sbjct: 131 --RFIHRDLAARNLLL 144
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 12/141 (8%)
Query: 304 KNILGRGGFGKVYKGRLA-DGKL---VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLL 359
+ ++G G FG+V GRL GK VA+K LK T F E I+ H N++
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH 419
L G T ++V YM NGS+ + L++ + +G RG+S ++
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQ-------LVGMLRGISAGMKY 139
Query: 420 -CDPKIIHRDVKAANILLDED 439
D +HRD+ A NIL++ +
Sbjct: 140 LSDMGYVHRDLAARNILINSN 160
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 64/136 (47%), Gaps = 13/136 (9%)
Query: 307 LGRGGFGKVYKGRL--ADGKLV--AVKRLKEERTSGGEL--QFQTEVKIISMAVHRNLLR 360
LG G FG V +G GK V AVK LK + S E F EV + HRNL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
LYG T K +V GS+ RLR+ Q T + A+ A G+ YL
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGYLESK- 134
Query: 421 DPKIIHRDVKAANILL 436
+ IHRD+ A N+LL
Sbjct: 135 --RFIHRDLAARNLLL 148
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 64/136 (47%), Gaps = 13/136 (9%)
Query: 307 LGRGGFGKVYKGRL--ADGKLV--AVKRLKEERTSGGEL--QFQTEVKIISMAVHRNLLR 360
LG G FG V +G GK V AVK LK + S E F EV + HRNL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
LYG T K +V GS+ RLR+ Q T + A+ A G+ YL
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGYLESK- 140
Query: 421 DPKIIHRDVKAANILL 436
+ IHRD+ A N+LL
Sbjct: 141 --RFIHRDLAARNLLL 154
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 64/136 (47%), Gaps = 13/136 (9%)
Query: 307 LGRGGFGKVYKGRL--ADGKLV--AVKRLKEERTSGGEL--QFQTEVKIISMAVHRNLLR 360
LG G FG V +G GK V AVK LK + S E F EV + HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
LYG T K +V GS+ RLR+ Q T + A+ A G+ YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGYLESK- 130
Query: 421 DPKIIHRDVKAANILL 436
+ IHRD+ A N+LL
Sbjct: 131 --RFIHRDLAARNLLL 144
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 64/136 (47%), Gaps = 13/136 (9%)
Query: 307 LGRGGFGKVYKGRL--ADGKLV--AVKRLKEERTSGGEL--QFQTEVKIISMAVHRNLLR 360
LG G FG V +G GK V AVK LK + S E F EV + HRNL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
LYG T K +V GS+ RLR+ Q T + A+ A G+ YL
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGYLESK- 140
Query: 421 DPKIIHRDVKAANILL 436
+ IHRD+ A N+LL
Sbjct: 141 --RFIHRDLAARNLLL 154
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 64/136 (47%), Gaps = 13/136 (9%)
Query: 307 LGRGGFGKVYKGRL--ADGKLV--AVKRLKEERTSGGEL--QFQTEVKIISMAVHRNLLR 360
LG G FG V +G GK V AVK LK + S E F EV + HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
LYG T K +V GS+ RLR+ Q T + A+ A G+ YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGYLESK- 130
Query: 421 DPKIIHRDVKAANILL 436
+ IHRD+ A N+LL
Sbjct: 131 --RFIHRDLAARNLLL 144
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 10/152 (6%)
Query: 290 SLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGELQFQTEVK 348
S+ + ++ + K+ LG G +G+VY G L VAVK LKE+ E F E
Sbjct: 23 SMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 80
Query: 349 IISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALG 408
++ H NL++L G CT +V YM G++ LRE + L
Sbjct: 81 VMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNRE------EVTAVVLLY 134
Query: 409 SARGLSYLHEHCDPK-IIHRDVKAANILLDED 439
A +S E+ + K IHRD+ A N L+ E+
Sbjct: 135 MATQISSAMEYLEKKNFIHRDLAARNCLVGEN 166
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 64/136 (47%), Gaps = 13/136 (9%)
Query: 307 LGRGGFGKVYKGRL--ADGKLV--AVKRLKEERTSGGEL--QFQTEVKIISMAVHRNLLR 360
LG G FG V +G GK V AVK LK + S E F EV + HRNL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
LYG T K +V GS+ RLR+ Q T + A+ A G+ YL
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGYLESK- 134
Query: 421 DPKIIHRDVKAANILL 436
+ IHRD+ A N+LL
Sbjct: 135 --RFIHRDLAARNLLL 148
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 7/132 (5%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG G FG+V+ G + VAVK LK S F E ++ H L+RLY T
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQ--AFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIH 426
++ +M GS+ L+ + L P + A G++Y+ IH
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERK---NYIH 132
Query: 427 RDVKAANILLDE 438
RD++AAN+L+ E
Sbjct: 133 RDLRAANVLVSE 144
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 11/138 (7%)
Query: 307 LGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLYGF 364
+G+G F KV R + GK VAVK + + + + LQ EV+I+ + H N+++L+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 365 CTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK- 423
T LV Y + G V L ++K A R + ++C K
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR--------MKEKEARAKFRQIVSAVQYCHQKF 133
Query: 424 IIHRDVKAANILLDEDAD 441
I+HRD+KA N+LLD D +
Sbjct: 134 IVHRDLKAENLLLDADMN 151
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 11/138 (7%)
Query: 307 LGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLYGF 364
+G+G F KV R + GK VAVK + + + + LQ EV+I+ + H N+++L+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 365 CTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK- 423
T LV Y + G V L ++K A R + ++C K
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR--------MKEKEARAKFRQIVSAVQYCHQKF 133
Query: 424 IIHRDVKAANILLDEDAD 441
I+HRD+KA N+LLD D +
Sbjct: 134 IVHRDLKAENLLLDADMN 151
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 18/144 (12%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVH 355
F +L G FG VYKG + +G+ VA+K L+E + + E +++ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARG 412
++ RL G C T T +L++ M G + +RE + ++ L+W + A+G
Sbjct: 84 PHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
++YL D +++HRD+ A N+L+
Sbjct: 137 MNYLE---DRRLVHRDLAARNVLV 157
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 11/138 (7%)
Query: 307 LGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLYGF 364
+G+G F KV R + GK VAVK + + + + LQ EV+I+ + H N+++L+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 365 CTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK- 423
T LV Y + G V L ++K A R + ++C K
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR--------MKEKEARAKFRQIVSAVQYCHQKF 133
Query: 424 IIHRDVKAANILLDEDAD 441
I+HRD+KA N+LLD D +
Sbjct: 134 IVHRDLKAENLLLDADMN 151
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 307 LGRGGFGKVYKGRLAD---GKL---VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
LG+G FG VY+G D G+ VAVK + E + ++F E ++ +++R
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLR------ERQSSLPPLDWPTRKKIALGSARGLS 414
L G + L+V M +G + S LR E PP ++A A G++
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 415 YLHEHCDPKIIHRDVKAANILLDED 439
YL+ K +HRD+ A N ++ D
Sbjct: 144 YLNAK---KFVHRDLAARNCMVAHD 165
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 18/144 (12%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVH 355
F +L G FG VYKG + +G+ VA+K L+E + + E +++ +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARG 412
++ RL G C T T +L+ M G + +RE + ++ L+W + A+G
Sbjct: 77 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
++YL D +++HRD+ A N+L+
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLV 150
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 18/144 (12%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVH 355
F +LG G FG VYKG + +G+ VA+ L+E + + E +++ +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARG 412
++ RL G C T T +L+ M G + +RE + ++ L+W + A+G
Sbjct: 111 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 163
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
++YL D +++HRD+ A N+L+
Sbjct: 164 MNYLE---DRRLVHRDLAARNVLV 184
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 293 ELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM 352
E +V + LG G FG+V+ G VAVK LK+ S F E ++
Sbjct: 9 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQ 66
Query: 353 AVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS--- 409
H+ L+RLY T ++ YM NGS+ L+ P+ K+ +
Sbjct: 67 LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT----------PSGIKLTINKLLD 115
Query: 410 -----ARGLSYLHEHCDPKIIHRDVKAANILLDE 438
A G++++ E IHRD++AANIL+ +
Sbjct: 116 MAAQIAEGMAFIEER---NYIHRDLRAANILVSD 146
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLYGFC 365
+G G FG VYKG+ VAVK LK + + Q F+ EV ++ H N+L G+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 366 TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKII 425
T +V + S+ L +++ IA +A+G+ YLH II
Sbjct: 102 TK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQ---LIDIARQTAQGMDYLHAK---NII 154
Query: 426 HRDVKAANILLDE 438
HRD+K+ NI L E
Sbjct: 155 HRDMKSNNIFLHE 167
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 293 ELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM 352
E +V + LG G FG+V+ G VAVK LK+ S F E ++
Sbjct: 16 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQ 73
Query: 353 AVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS--- 409
H+ L+RLY T ++ YM NGS+ L+ P+ K+ +
Sbjct: 74 LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT----------PSGIKLTINKLLD 122
Query: 410 -----ARGLSYLHEHCDPKIIHRDVKAANILLDE 438
A G++++ E IHRD++AANIL+ +
Sbjct: 123 MAAQIAEGMAFIEER---NYIHRDLRAANILVSD 153
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 293 ELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM 352
E +V + LG G FG+V+ G VAVK LK+ S F E ++
Sbjct: 8 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQ 65
Query: 353 AVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS--- 409
H+ L+RLY T ++ YM NGS+ L+ P+ K+ +
Sbjct: 66 LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT----------PSGIKLTINKLLD 114
Query: 410 -----ARGLSYLHEHCDPKIIHRDVKAANILLDE 438
A G++++ E IHRD++AANIL+ +
Sbjct: 115 MAAQIAEGMAFIEER---NYIHRDLRAANILVSD 145
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRLKEER--TSGGELQFQTEVKIIS 351
+ D F LG+G FG VY R K + A+K L + + G E Q + E++I S
Sbjct: 11 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 70
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LR+Y + L+ + G + L++ D A
Sbjct: 71 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR----FDEQRSATFMEELAD 126
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
L Y HE K+IHRD+K N+L+
Sbjct: 127 ALHYCHER---KVIHRDIKPENLLM 148
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 19/157 (12%)
Query: 288 RFSLRELQVATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEE---RTSGGELQF 343
++SL++ Q+ LG G FG+V+ R +G+ A+K LK+E R E
Sbjct: 2 KYSLQDFQIL-------RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVE-HT 53
Query: 344 QTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRK 403
E ++S+ H ++R++G + ++ Y+ G + S LR+ Q P P K
Sbjct: 54 NDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQR-FPN---PVAK 109
Query: 404 KIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440
A L YLH II+RD+K NILLD++
Sbjct: 110 FYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNG 143
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 18/144 (12%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVH 355
F +L G FG VYKG + +G+ VA+K L+E + + E +++ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARG 412
++ RL G C T T +L+ M G + +RE + ++ L+W + A+G
Sbjct: 84 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
++YL D +++HRD+ A N+L+
Sbjct: 137 MNYLE---DRRLVHRDLAARNVLV 157
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 63/132 (47%), Gaps = 8/132 (6%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG G FG+V+ G VAVK LK+ S F E ++ H+ L+RLY T
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYAVVT 73
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIH 426
++ YM NGS+ L + S L +A A G++++ E IH
Sbjct: 74 Q-EPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 127
Query: 427 RDVKAANILLDE 438
RD++AANIL+ +
Sbjct: 128 RDLRAANILVSD 139
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 293 ELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM 352
E +V + LG G FG+V+ G VAVK LK+ S F E ++
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQ 64
Query: 353 AVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS--- 409
H+ L+RLY T ++ YM NGS+ L+ P+ K+ +
Sbjct: 65 LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT----------PSGIKLTINKLLD 113
Query: 410 -----ARGLSYLHEHCDPKIIHRDVKAANILLDE 438
A G++++ E IHRD++AANIL+ +
Sbjct: 114 MAAQIAEGMAFIEER---NYIHRDLRAANILVSD 144
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRL-KEERTSGGELQ-FQTEVKIISMAVH 355
+ F N+LG+G F VY+ + G VA+K + K+ G +Q Q EVKI H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415
++L LY + LV NG + L+ R + P + G+ Y
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNR---VKPFSENEARHFMHQIITGMLY 127
Query: 416 LHEHCDPKIIHRDVKAANILL 436
LH H I+HRD+ +N+LL
Sbjct: 128 LHSH---GILHRDLTLSNLLL 145
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRLKEER--TSGGELQFQTEVKIIS 351
+ D F LG+G FG VY R K + A+K L + + G E Q + E++I S
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LR+Y + L+ + G + L++ D A
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR----FDEQRSATFMEELAD 125
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
L Y HE K+IHRD+K N+L+
Sbjct: 126 ALHYCHER---KVIHRDIKPENLLM 147
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 293 ELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM 352
E +V + LG G FG+V+ G VAVK LK+ S F E ++
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQ 70
Query: 353 AVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS--- 409
H+ L+RLY T ++ YM NGS+ L+ P+ K+ +
Sbjct: 71 LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT----------PSGIKLTINKLLD 119
Query: 410 -----ARGLSYLHEHCDPKIIHRDVKAANILLDE 438
A G++++ E IHRD++AANIL+ +
Sbjct: 120 MAAQIAEGMAFIEER---NYIHRDLRAANILVSD 150
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 10/145 (6%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRLKEER--TSGGELQFQTEVKIIS 351
+ D F LG+G FG VY R K + A+K L + + G E Q + E++I S
Sbjct: 10 KFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H N+LR+Y + L+ + G + L++ D A
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR----FDEQRSATFMEELAD 125
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
L Y HE K+IHRD+K N+L+
Sbjct: 126 ALHYCHER---KVIHRDIKPENLLM 147
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 293 ELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM 352
E +V + LG G FG+V+ G VAVK LK+ S F E ++
Sbjct: 12 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQ 69
Query: 353 AVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS--- 409
H+ L+RLY T ++ YM NGS+ L+ P+ K+ +
Sbjct: 70 LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT----------PSGIKLTINKLLD 118
Query: 410 -----ARGLSYLHEHCDPKIIHRDVKAANILLDE 438
A G++++ E IHRD++AANIL+ +
Sbjct: 119 MAAQIAEGMAFIEER---NYIHRDLRAANILVSD 149
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 293 ELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM 352
E +V + LG G FG+V+ G VAVK LK+ S F E ++
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQ 64
Query: 353 AVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS--- 409
H+ L+RLY T ++ YM NGS+ L+ P+ K+ +
Sbjct: 65 LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT----------PSGIKLTINKLLD 113
Query: 410 -----ARGLSYLHEHCDPKIIHRDVKAANILLDE 438
A G++++ E IHRD++AANIL+ +
Sbjct: 114 MAAQIAEGMAFIEER---NYIHRDLRAANILVSD 144
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 24/140 (17%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG G FG+V+ G VAVK LK+ S F E ++ H+ L+RLY T
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS--------ARGLSYLHE 418
++ YM NGS+ L+ P+ K+ + A G++++ E
Sbjct: 85 Q-EPIYIITEYMENGSLVDFLKT----------PSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 419 HCDPKIIHRDVKAANILLDE 438
IHRD++AANIL+ +
Sbjct: 134 R---NYIHRDLRAANILVSD 150
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 293 ELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM 352
E +V + LG G FG+V+ G VAVK LK+ S F E ++
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQ 64
Query: 353 AVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS--- 409
H+ L+RLY T ++ YM NGS+ L+ P+ K+ +
Sbjct: 65 LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT----------PSGIKLTINKLLD 113
Query: 410 -----ARGLSYLHEHCDPKIIHRDVKAANILLDE 438
A G++++ E IHRD++AANIL+ +
Sbjct: 114 MAAQIAEGMAFIEER---NYIHRDLRAANILVSD 144
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 10/138 (7%)
Query: 304 KNILGRGGFGKVYKGRLA-DGK---LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLL 359
+ ++G G FG+V GRL GK VA+K LK T F E I+ H N++
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH 419
L G T ++V +M NG++ + LR+ + + G A G+ YL
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVI---QLVGMLRGIAAGMRYL--- 161
Query: 420 CDPKIIHRDVKAANILLD 437
D +HRD+ A NIL++
Sbjct: 162 ADMGYVHRDLAARNILVN 179
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 21/143 (14%)
Query: 307 LGRGGFGKVYKGR--LADGKLVAVKRLK-EERTSGGELQFQTEVKII---SMAVHRNLLR 360
+G G +GKV+K R G+ VA+KR++ + G L EV ++ H N++R
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 361 LYGFCTTV-----TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTR--KKIALGSARGL 413
L+ CT T+ LV+ + V L +P PT K + RGL
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEH-----VDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 414 SYLHEHCDPKIIHRDVKAANILL 436
+LH H +++HRD+K NIL+
Sbjct: 134 DFLHSH---RVVHRDLKPQNILV 153
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 7/145 (4%)
Query: 297 ATDGFSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVH 355
++ F LG G + VYKG G VA+K +K + G E+ ++ H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP--LDWPTRKKIALGSARGL 413
N++RLY T + LV+ +M N + + R P L+ K +GL
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 414 SYLHEHCDPKIIHRDVKAANILLDE 438
++ HE+ KI+HRD+K N+L+++
Sbjct: 122 AFCHEN---KILHRDLKPQNLLINK 143
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 24/140 (17%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG G FG+V+ G VAVK LK+ S F E ++ H+ L+RLY T
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYAVVT 86
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS--------ARGLSYLHE 418
++ YM NGS+ L+ P+ K+ + A G++++ E
Sbjct: 87 Q-EPIYIITEYMENGSLVDFLKT----------PSGIKLTINKLLDMAAQIAEGMAFIEE 135
Query: 419 HCDPKIIHRDVKAANILLDE 438
IHRD++AANIL+ +
Sbjct: 136 R---NYIHRDLRAANILVSD 152
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 24/140 (17%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG G FG+V+ G VAVK LK+ S F E ++ H+ L+RLY T
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYAVVT 88
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS--------ARGLSYLHE 418
++ YM NGS+ L+ P+ K+ + A G++++ E
Sbjct: 89 Q-EPIYIITEYMENGSLVDFLKT----------PSGIKLTINKLLDMAAQIAEGMAFIEE 137
Query: 419 HCDPKIIHRDVKAANILLDE 438
IHRD++AANIL+ +
Sbjct: 138 R---NYIHRDLRAANILVSD 154
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 14/136 (10%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
+G+G FG V G G VAVK +K + T+ F E +++ H NL++L G
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLG--V 67
Query: 367 TVTEK---LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK 423
V EK +V YM GS+ LR R S+ L K +L + YL +
Sbjct: 68 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDCLLKFSLDVCEAMEYLEGN---N 122
Query: 424 IIHRDVKAANILLDED 439
+HRD+ A N+L+ ED
Sbjct: 123 FVHRDLAARNVLVSED 138
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 304 KNILGRGGFGKVYKGRLADGKL---VAVKRLKEERTSGGELQFQTEVKII-SMAVHRNLL 359
++++G G FG+V K R+ L A+KR+KE + F E++++ + H N++
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQ------------SSLPPLDWPTRKKIAL 407
L G C L Y +G++ LR+ + S+ L A
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 408 GSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
ARG+ YL + + IHR++ A NIL+ E+
Sbjct: 147 DVARGMDYLSQK---QFIHRNLAARNILVGEN 175
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 14/136 (10%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
+G+G FG V G G VAVK +K + T+ F E +++ H NL++L G
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLG--V 73
Query: 367 TVTEK---LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK 423
V EK +V YM GS+ LR R S+ L K +L + YL +
Sbjct: 74 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDCLLKFSLDVCEAMEYLEGN---N 128
Query: 424 IIHRDVKAANILLDED 439
+HRD+ A N+L+ ED
Sbjct: 129 FVHRDLAARNVLVSED 144
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 11/138 (7%)
Query: 307 LGRGGFGKVYKGR--LADGKLVAVKRLK-EERTSGGELQFQTEVKII---SMAVHRNLLR 360
+G G +GKV+K R G+ VA+KR++ + G L EV ++ H N++R
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTR--KKIALGSARGLSYLHE 418
L+ CT + V L +P PT K + RGL +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 419 HCDPKIIHRDVKAANILL 436
H +++HRD+K NIL+
Sbjct: 139 H---RVVHRDLKPQNILV 153
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 24/154 (15%)
Query: 307 LGRGGFGKVY--------KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM-AVHRN 357
LG G FG+V K + + VAVK LK++ T +E++++ M H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 358 LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQS---------SLPPLDWPTRKKIALG 408
++ L G CT ++ Y + G++ LR R+ + P + T K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 409 S---ARGLSYLHEHCDPKIIHRDVKAANILLDED 439
+ ARG+ YL K IHRD+ A N+L+ E+
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTEN 193
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 11/138 (7%)
Query: 307 LGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLYGF 364
+G+G F KV R + GK VAV+ + + + + LQ EV+I+ + H N+++L+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 365 CTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK- 423
T LV Y + G V L ++K A R + ++C K
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR--------MKEKEARAKFRQIVSAVQYCHQKF 133
Query: 424 IIHRDVKAANILLDEDAD 441
I+HRD+KA N+LLD D +
Sbjct: 134 IVHRDLKAENLLLDADMN 151
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 11/138 (7%)
Query: 307 LGRGGFGKVYKGR--LADGKLVAVKRLK-EERTSGGELQFQTEVKII---SMAVHRNLLR 360
+G G +GKV+K R G+ VA+KR++ + G L EV ++ H N++R
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTR--KKIALGSARGLSYLHE 418
L+ CT + V L +P PT K + RGL +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 419 HCDPKIIHRDVKAANILL 436
H +++HRD+K NIL+
Sbjct: 139 H---RVVHRDLKPQNILV 153
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 11/138 (7%)
Query: 307 LGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLYGF 364
+G+G F KV R + GK VAV+ + + + + LQ EV+I+ + H N+++L+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 365 CTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK- 423
T LV Y + G V L ++K A R + ++C K
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR--------MKEKEARAKFRQIVSAVQYCHQKF 133
Query: 424 IIHRDVKAANILLDEDAD 441
I+HRD+KA N+LLD D +
Sbjct: 134 IVHRDLKAENLLLDADMN 151
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 14/136 (10%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
+G+G FG V G G VAVK +K + T+ F E +++ H NL++L G
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLG--V 82
Query: 367 TVTEK---LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK 423
V EK +V YM GS+ LR R S+ L K +L + YL +
Sbjct: 83 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDCLLKFSLDVCEAMEYLEGN---N 137
Query: 424 IIHRDVKAANILLDED 439
+HRD+ A N+L+ ED
Sbjct: 138 FVHRDLAARNVLVSED 153
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 24/154 (15%)
Query: 307 LGRGGFGKVY--------KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM-AVHRN 357
LG G FG+V K + + VAVK LK++ T +E++++ M H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 358 LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQS---------SLPPLDWPTRKKIALG 408
++ L G CT ++ Y + G++ LR R+ + P + T K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 409 S---ARGLSYLHEHCDPKIIHRDVKAANILLDED 439
+ ARG+ YL K IHRD+ A N+L+ E+
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTEN 193
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 24/154 (15%)
Query: 307 LGRGGFGKVY--------KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM-AVHRN 357
LG G FG+V K + + VAVK LK++ T +E++++ M H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 358 LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQS---------SLPPLDWPTRKKIALG 408
++ L G CT ++ Y + G++ LR R+ + P + T K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 409 S---ARGLSYLHEHCDPKIIHRDVKAANILLDED 439
+ ARG+ YL K IHRD+ A N+L+ E+
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTEN 193
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 6/149 (4%)
Query: 296 VATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSG--GELQFQTEVKIISM 352
+ D F + +LGRGGFG+V+ ++ A GKL A K+L ++R G E KI++
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 353 AVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARG 412
R ++ L T T+ LV M G + + P P G
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 413 LSYLHEHCDPKIIHRDVKAANILLDEDAD 441
L +LH+ II+RD+K N+LLD+D +
Sbjct: 302 LEHLHQR---NIIYRDLKPENVLLDDDGN 327
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 9/144 (6%)
Query: 297 ATDGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQT-EVKIISMAV 354
+ + + N ++G G +G V K R D G++VA+K+ E + E+K++
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 355 HRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
H NL+ L C LV+ ++ + + L + + LD+ +K G+
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDH----TILDDLELFPNGLDYQVVQKYLFQIINGIG 138
Query: 415 YLHEHCDPKIIHRDVKAANILLDE 438
+ H H IIHRD+K NIL+ +
Sbjct: 139 FCHSH---NIIHRDIKPENILVSQ 159
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 6/167 (3%)
Query: 278 DSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAV--KRLKEE 334
DS+ L L+ L + D F + +LGRGGFG+V+ ++ A GKL A K
Sbjct: 164 DSKYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRL 223
Query: 335 RTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSL 394
+ G E KI++ R ++ L T T+ LV M G + +
Sbjct: 224 KKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN 283
Query: 395 PPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
P P GL +LH+ II+RD+K N+LLD+D +
Sbjct: 284 PGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGN 327
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 24/154 (15%)
Query: 307 LGRGGFGKVY--------KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM-AVHRN 357
LG G FG+V K + + VAVK LK++ T +E++++ M H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 358 LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQS---------SLPPLDWPTRKKIALG 408
++ L G CT ++ Y + G++ LR R+ + P + T K +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 409 S---ARGLSYLHEHCDPKIIHRDVKAANILLDED 439
+ ARG+ YL K IHRD+ A N+L+ E+
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTEN 193
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 291 LRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKI 349
L+E + + ++G+G FG+VY GR VA++ + ER + +L+ F+ EV
Sbjct: 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGE--VAIRLIDIERDNEDQLKAFKREVMA 82
Query: 350 ISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS 409
H N++ G C + ++ ++ S +R+ + LD ++IA
Sbjct: 83 YRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIV---LDVNKTRQIAQEI 139
Query: 410 ARGLSYLHEHCDPKIIHRDVKAANILLD 437
+G+ YLH I+H+D+K+ N+ D
Sbjct: 140 VKGMGYLHAKG---ILHKDLKSKNVFYD 164
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 24/154 (15%)
Query: 307 LGRGGFGKVY--------KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM-AVHRN 357
LG G FG+V K + + VAVK LK++ T +E++++ M H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 358 LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQS---------SLPPLDWPTRKKIALG 408
++ L G CT ++ Y + G++ LR R+ + P + T K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 409 S---ARGLSYLHEHCDPKIIHRDVKAANILLDED 439
+ ARG+ YL K IHRD+ A N+L+ E+
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTEN 193
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 14/136 (10%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
+G+G FG V G G VAVK +K + T+ F E +++ H NL++L G
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLG--V 254
Query: 367 TVTEK---LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK 423
V EK +V YM GS+ LR R S+ L K +L + YL +
Sbjct: 255 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDCLLKFSLDVCEAMEYLEGN---N 309
Query: 424 IIHRDVKAANILLDED 439
+HRD+ A N+L+ ED
Sbjct: 310 FVHRDLAARNVLVSED 325
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 24/154 (15%)
Query: 307 LGRGGFGKVY--------KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM-AVHRN 357
LG G FG+V K + + VAVK LK++ T +E++++ M H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 358 LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQS---------SLPPLDWPTRKKIALG 408
++ L G CT ++ Y + G++ LR R+ + P + T K +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 409 S---ARGLSYLHEHCDPKIIHRDVKAANILLDED 439
+ ARG+ YL K IHRD+ A N+L+ E+
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTEN 193
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 307 LGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLYGF 364
+G+G F KV R + GK VAVK + + + + LQ EV+I + H N+++L+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 365 CTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK- 423
T LV Y + G V L ++K A R + ++C K
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGR--------XKEKEARAKFRQIVSAVQYCHQKF 133
Query: 424 IIHRDVKAANILLDEDAD 441
I+HRD+KA N+LLD D +
Sbjct: 134 IVHRDLKAENLLLDADXN 151
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
Query: 293 ELQVATDGFSNKNILGRGGFGKVYKGRLAD---GKL---VAVKRLKEERTSGGELQFQTE 346
E +V+ + + LG+G FG VY+G D G+ VAVK + E + ++F E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 347 VKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLR------ERQSSLPPLDWP 400
++ +++RL G + L+V M +G + S LR E PP
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 401 TRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
++A A G++YL+ K +HR++ A N ++ D
Sbjct: 131 EMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHD 166
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 12/145 (8%)
Query: 301 FSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLK----EERTSGGELQFQTEVKIISMAVH 355
+ + LG G F VYK R + ++VA+K++K E G E+K++ H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415
N++ L + LV+ +M + +++ L P K L + +GL Y
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTP---SHIKAYMLMTLQGLEY 127
Query: 416 LHEHCDPKIIHRDVKAANILLDEDA 440
LH+H I+HRD+K N+LLDE+
Sbjct: 128 LHQHW---ILHRDLKPNNLLLDENG 149
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 27/148 (18%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRL--KEERTSGGELQFQTEVKIISMAVHRNLLRLYGF 364
+G+G FG+V++G+ G+ VAVK +EER+ E + V M H N+L GF
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTV----MLRHENIL---GF 62
Query: 365 CT-------TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLH 417
T T+ LV Y +GS+ L ++ + K+AL +A GL++LH
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLH 117
Query: 418 -----EHCDPKIIHRDVKAANILLDEDA 440
P I HRD+K+ NIL+ ++
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNG 145
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 27/148 (18%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRL--KEERTSGGELQFQTEVKIISMAVHRNLLRLYGF 364
+G+G FG+V++G+ G+ VAVK +EER+ E + V M H N+L GF
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTV----MLRHENIL---GF 63
Query: 365 CT-------TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLH 417
T T+ LV Y +GS+ L ++ + K+AL +A GL++LH
Sbjct: 64 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLH 118
Query: 418 -----EHCDPKIIHRDVKAANILLDEDA 440
P I HRD+K+ NIL+ ++
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKNG 146
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
Query: 293 ELQVATDGFSNKNILGRGGFGKVYKGRLAD---GKL---VAVKRLKEERTSGGELQFQTE 346
E +V+ + + LG+G FG VY+G D G+ VAVK + E + ++F E
Sbjct: 12 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 71
Query: 347 VKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLR------ERQSSLPPLDWP 400
++ +++RL G + L+V M +G + S LR E PP
Sbjct: 72 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 131
Query: 401 TRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
++A A G++YL+ K +HR++ A N ++ D
Sbjct: 132 EMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHD 167
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 6/149 (4%)
Query: 296 VATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSG--GELQFQTEVKIISM 352
+ D F + +LGRGGFG+V+ ++ A GKL A K+L ++R G E KI++
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 353 AVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARG 412
R ++ L T T+ LV M G + + P P G
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 413 LSYLHEHCDPKIIHRDVKAANILLDEDAD 441
L +LH+ II+RD+K N+LLD+D +
Sbjct: 302 LEHLHQR---NIIYRDLKPENVLLDDDGN 327
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 304 KNILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
K+ LG G +G+VY+G L VAVK LKE+ E F E ++ H NL++L
Sbjct: 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 282
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRE--RQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
G CT ++ +MT G++ LRE RQ + L A +S E+
Sbjct: 283 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAMEYL 334
Query: 421 DPK-IIHRDVKAANILLDED 439
+ K IHR++ A N L+ E+
Sbjct: 335 EKKNFIHRNLAARNCLVGEN 354
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 24/154 (15%)
Query: 307 LGRGGFGKVY--------KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM-AVHRN 357
LG G FG+V K + + VAVK LK++ T +E++++ M H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 358 LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQS---------SLPPLDWPTRKKIALG 408
++ L G CT ++ Y + G++ LR R+ + P + T K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 409 S---ARGLSYLHEHCDPKIIHRDVKAANILLDED 439
+ ARG+ YL K IHRD+ A N+L+ E+
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTEN 193
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 27/148 (18%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRL--KEERTSGGELQFQTEVKIISMAVHRNLLRLYGF 364
+G+G FG+V++G+ G+ VAVK +EER+ E + V M H N+L GF
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTV----MLRHENIL---GF 88
Query: 365 CT-------TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLH 417
T T+ LV Y +GS+ L ++ + K+AL +A GL++LH
Sbjct: 89 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLH 143
Query: 418 -----EHCDPKIIHRDVKAANILLDEDA 440
P I HRD+K+ NIL+ ++
Sbjct: 144 MEIVGTQGKPAIAHRDLKSKNILVKKNG 171
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 304 KNILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
K+ LG G +G+VY+G L VAVK LKE+ E F E ++ H NL++L
Sbjct: 264 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 321
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRE--RQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
G CT ++ +MT G++ LRE RQ + L A +S E+
Sbjct: 322 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYL 373
Query: 421 DPK-IIHRDVKAANILLDED 439
+ K IHR++ A N L+ E+
Sbjct: 374 EKKNFIHRNLAARNCLVGEN 393
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 27/148 (18%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRL--KEERTSGGELQFQTEVKIISMAVHRNLLRLYGF 364
+G+G FG+V++G+ G+ VAVK +EER+ E + V M H N+L GF
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTV----MLRHENIL---GF 68
Query: 365 CT-------TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLH 417
T T+ LV Y +GS+ L ++ + K+AL +A GL++LH
Sbjct: 69 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLH 123
Query: 418 -----EHCDPKIIHRDVKAANILLDEDA 440
P I HRD+K+ NIL+ ++
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILVKKNG 151
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 6/149 (4%)
Query: 296 VATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSG--GELQFQTEVKIISM 352
+ D F + +LGRGGFG+V+ ++ A GKL A K+L ++R G E KI++
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 353 AVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARG 412
R ++ L T T+ LV M G + + P P G
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 413 LSYLHEHCDPKIIHRDVKAANILLDEDAD 441
L +LH+ II+RD+K N+LLD+D +
Sbjct: 302 LEHLHQR---NIIYRDLKPENVLLDDDGN 327
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 24/154 (15%)
Query: 307 LGRGGFGKVY--------KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM-AVHRN 357
LG G FG+V K + + VAVK LK++ T +E++++ M H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 358 LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQS---------SLPPLDWPTRKKIALG 408
++ L G CT ++ Y + G++ LR R+ + P + T K +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 409 S---ARGLSYLHEHCDPKIIHRDVKAANILLDED 439
+ ARG+ YL K IHRD+ A N+L+ E+
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTEN 193
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 304 KNILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
K+ LG G +G+VY+G L VAVK LKE+ E F E ++ H NL++L
Sbjct: 222 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 279
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRE--RQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
G CT ++ +MT G++ LRE RQ + L A +S E+
Sbjct: 280 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYL 331
Query: 421 DPK-IIHRDVKAANILLDED 439
+ K IHR++ A N L+ E+
Sbjct: 332 EKKNFIHRNLAARNCLVGEN 351
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 27/148 (18%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRL--KEERTSGGELQFQTEVKIISMAVHRNLLRLYGF 364
+G+G FG+V++G+ G+ VAVK +EER+ E + V M H N+L GF
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTV----MLRHENIL---GF 65
Query: 365 CT-------TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLH 417
T T+ LV Y +GS+ L ++ + K+AL +A GL++LH
Sbjct: 66 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLH 120
Query: 418 -----EHCDPKIIHRDVKAANILLDEDA 440
P I HRD+K+ NIL+ ++
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILVKKNG 148
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 27/148 (18%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRL--KEERTSGGELQFQTEVKIISMAVHRNLLRLYGF 364
+G+G FG+V++G+ G+ VAVK +EER+ E + V M H N+L GF
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTV----MLRHENIL---GF 101
Query: 365 CT-------TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLH 417
T T+ LV Y +GS+ L ++ + K+AL +A GL++LH
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLH 156
Query: 418 -----EHCDPKIIHRDVKAANILLDEDA 440
P I HRD+K+ NIL+ ++
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNG 184
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 22/142 (15%)
Query: 305 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGEL--QFQTEVKIISMAVHRNLLRL 361
+ LG G FGKV G+ G VAVK L ++ ++ + + E++ + + H ++++L
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 362 YGFCTTVTEKLLVYPYMTNGSVAS------RLRERQSSLPPLDWPTRKKIALGSARGLSY 415
Y +T ++ +V Y++ G + RL E++S +++ G+ Y
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKES----------RRLFQQILSGVDY 131
Query: 416 LHEHCDPKIIHRDVKAANILLD 437
H H ++HRD+K N+LLD
Sbjct: 132 CHRHM---VVHRDLKPENVLLD 150
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 12/135 (8%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG+G FG+V+ G VA+K LK S F E +++ H L++LY
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--AFLQEAQVMKKLRHEKLVQLYA--- 71
Query: 367 TVTEK--LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI 424
V+E+ +V YM+ GS+ L+ L P +A A G++Y+
Sbjct: 72 VVSEEPIYIVTEYMSKGSLLDFLKGEMGKY--LRLPQLVDMAAQIASGMAYVERM---NY 126
Query: 425 IHRDVKAANILLDED 439
+HRD++AANIL+ E+
Sbjct: 127 VHRDLRAANILVGEN 141
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 12/135 (8%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG+G FG+V+ G VA+K LK S F E +++ H L++LY
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMS--PEAFLQEAQVMKKLRHEKLVQLYA--- 247
Query: 367 TVTEK--LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI 424
V+E+ +V YM+ GS+ L+ L P +A A G++Y+
Sbjct: 248 VVSEEPIYIVTEYMSKGSLLDFLKGEMGKY--LRLPQLVDMAAQIASGMAYVERM---NY 302
Query: 425 IHRDVKAANILLDED 439
+HRD++AANIL+ E+
Sbjct: 303 VHRDLRAANILVGEN 317
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 12/135 (8%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG+G FG+V+ G VA+K LK S F E +++ H L++LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--AFLQEAQVMKKIRHEKLVQLYA--- 80
Query: 367 TVTEK--LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI 424
V+E+ +V YM+ GS+ L+ L P +A A G++Y+
Sbjct: 81 VVSEEPIYIVTEYMSKGSLLDFLKGEMGKY--LRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 425 IHRDVKAANILLDED 439
+HRD++AANIL+ E+
Sbjct: 136 VHRDLRAANILVGEN 150
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 12/135 (8%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG+G FG+V+ G VA+K LK S F E +++ H L++LY
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--AFLQEAQVMKKLRHEKLVQLYA--- 69
Query: 367 TVTEK--LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI 424
V+E+ +V YM+ GS+ L+ L P +A A G++Y+
Sbjct: 70 VVSEEPIYIVTEYMSKGSLLDFLKGEMGKY--LRLPQLVDMAAQIASGMAYVERM---NY 124
Query: 425 IHRDVKAANILLDED 439
+HRD++AANIL+ E+
Sbjct: 125 VHRDLRAANILVGEN 139
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 12/135 (8%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG+G FG+V+ G VA+K LK S F E +++ H L++LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--AFLQEAQVMKKLRHEKLVQLYA--- 80
Query: 367 TVTEK--LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI 424
V+E+ +V YM+ GS+ L+ L P +A A G++Y+
Sbjct: 81 VVSEEPIYIVIEYMSKGSLLDFLKGEMGKY--LRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 425 IHRDVKAANILLDED 439
+HRD++AANIL+ E+
Sbjct: 136 VHRDLRAANILVGEN 150
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 24/154 (15%)
Query: 307 LGRGGFGKVY--------KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM-AVHRN 357
LG G FG+V K + + VAVK LK++ T +E++++ M H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 358 LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQS---------SLPPLDWPTRKKIALG 408
++ L G CT ++ Y + G++ LR R+ + P + T K +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 409 S---ARGLSYLHEHCDPKIIHRDVKAANILLDED 439
+ ARG+ YL K IHRD+ A N+L+ E+
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTEN 193
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 12/135 (8%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG+G FG+V+ G VA+K LK S F E +++ H L++LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--AFLQEAQVMKKLRHEKLVQLYA--- 80
Query: 367 TVTEK--LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI 424
V+E+ +V YM+ GS+ L+ L P +A A G++Y+
Sbjct: 81 VVSEEPIYIVIEYMSKGSLLDFLKGEMGKY--LRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 425 IHRDVKAANILLDED 439
+HRD++AANIL+ E+
Sbjct: 136 VHRDLRAANILVGEN 150
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 12/135 (8%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG+G FG+V+ G VA+K LK S F E +++ H L++LY
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--AFLQEAQVMKKLRHEKLVQLYA--- 73
Query: 367 TVTEK--LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI 424
V+E+ +V YM+ GS+ L+ L P +A A G++Y+
Sbjct: 74 VVSEEPIYIVTEYMSKGSLLDFLKGETGKY--LRLPQLVDMAAQIASGMAYVERM---NY 128
Query: 425 IHRDVKAANILLDED 439
+HRD++AANIL+ E+
Sbjct: 129 VHRDLRAANILVGEN 143
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 12/135 (8%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG+G FG+V+ G VA+K LK S F E +++ H L++LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--AFLQEAQVMKKLRHEKLVQLYA--- 80
Query: 367 TVTEK--LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI 424
V+E+ +V YM+ GS+ L+ L P +A A G++Y+
Sbjct: 81 VVSEEPIYIVCEYMSKGSLLDFLKGEMGKY--LRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 425 IHRDVKAANILLDED 439
+HRD++AANIL+ E+
Sbjct: 136 VHRDLRAANILVGEN 150
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 12/135 (8%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG+G FG+V+ G VA+K LK S F E +++ H L++LY
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--AFLQEAQVMKKLRHEKLVQLYA--- 70
Query: 367 TVTEK--LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI 424
V+E+ +V YM+ GS+ L+ L P +A A G++Y+
Sbjct: 71 VVSEEPIXIVTEYMSKGSLLDFLKGETGKY--LRLPQLVDMAAQIASGMAYVERM---NY 125
Query: 425 IHRDVKAANILLDED 439
+HRD++AANIL+ E+
Sbjct: 126 VHRDLRAANILVGEN 140
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 24/154 (15%)
Query: 307 LGRGGFGKVY--------KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM-AVHRN 357
LG G FG+V K + + VAVK LK++ T +E++++ M H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 358 LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQS---------SLPPLDWPTRKKIALG 408
++ L G CT ++ Y + G++ LR R+ + P + T K +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 409 S---ARGLSYLHEHCDPKIIHRDVKAANILLDED 439
+ ARG+ YL K IHRD+ A N+L+ E+
Sbjct: 150 TYQLARGMEYLASQ---KCIHRDLTARNVLVTEN 180
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 12/135 (8%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG+G FG+V+ G VA+K LK S F E +++ H L++LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--AFLQEAQVMKKLRHEKLVQLYA--- 80
Query: 367 TVTEK--LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI 424
V+E+ +V YM+ GS+ L+ L P +A A G++Y+
Sbjct: 81 VVSEEPIYIVTEYMSKGSLLDFLKGEMGKY--LRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 425 IHRDVKAANILLDED 439
+HRD++AANIL+ E+
Sbjct: 136 VHRDLRAANILVGEN 150
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 307 LGRGGFGKVY--------KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM-AVHRN 357
LG G FG+V K + VAVK LK + T +E++++ M H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 358 LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQS-----SLPPLDWPTRK-------KI 405
++ L G CT ++ Y + G++ L+ R+ S P P +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 406 ALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
A ARG+ YL K IHRD+ A N+L+ ED
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTED 186
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 12/135 (8%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG+G FG+V+ G VA+K LK S F E +++ H L++LY
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--AFLQEAQVMKKLRHEKLVQLYA--- 246
Query: 367 TVTEK--LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI 424
V+E+ +V YM+ GS+ L+ L P +A A G++Y+
Sbjct: 247 VVSEEPIYIVTEYMSKGSLLDFLKGETGKY--LRLPQLVDMAAQIASGMAYVERM---NY 301
Query: 425 IHRDVKAANILLDED 439
+HRD++AANIL+ E+
Sbjct: 302 VHRDLRAANILVGEN 316
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 12/135 (8%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG+G FG+V+ G VA+K LK S F E +++ H L++LY
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--AFLQEAQVMKKLRHEKLVQLYA--- 246
Query: 367 TVTEK--LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI 424
V+E+ +V YM+ GS+ L+ L P +A A G++Y+
Sbjct: 247 VVSEEPIYIVTEYMSKGSLLDFLKGETGKY--LRLPQLVDMAAQIASGMAYVERM---NY 301
Query: 425 IHRDVKAANILLDED 439
+HRD++AANIL+ E+
Sbjct: 302 VHRDLRAANILVGEN 316
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 24/154 (15%)
Query: 307 LGRGGFGKVY--------KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM-AVHRN 357
LG G FG+V K + + VAVK LK++ T +E++++ M H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 358 LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQS---------SLPPLDWPTRKKIALG 408
++ L G CT ++ Y + G++ LR R+ + P + T K +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 409 S---ARGLSYLHEHCDPKIIHRDVKAANILLDED 439
+ ARG+ YL K IHRD+ A N+L+ E+
Sbjct: 152 TYQLARGMEYLASQ---KCIHRDLAARNVLVTEN 182
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 307 LGRGGFGKVY--------KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM-AVHRN 357
LG G FG+V K + VAVK LK + T +E++++ M H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 358 LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQS-----SLPPLDWPTRK-------KI 405
++ L G CT ++ Y + G++ L+ R+ S P P +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 406 ALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
A ARG+ YL K IHRD+ A N+L+ ED
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTED 186
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 24/154 (15%)
Query: 307 LGRGGFGKVY--------KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM-AVHRN 357
LG G FG+V K + + VAVK LK++ T +E++++ M H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 358 LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQS---------SLPPLDWPTRKKIALG 408
++ L G CT ++ Y + G++ LR R+ + P + T K +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 409 S---ARGLSYLHEHCDPKIIHRDVKAANILLDED 439
+ ARG+ YL K IHRD+ A N+L+ E+
Sbjct: 155 TYQLARGMEYLASQ---KCIHRDLAARNVLVTEN 185
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG G FG+V+ G VA+K LK S F E +I+ H L++LY
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPE--SFLEEAQIMKKLKHDKLVQLYA--- 71
Query: 367 TVTEK--LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI 424
V+E+ +V YM GS+ L++ + L P +A A G++Y+
Sbjct: 72 VVSEEPIYIVTEYMNKGSLLDFLKDGEGRA--LKLPNLVDMAAQVAAGMAYIERM---NY 126
Query: 425 IHRDVKAANILL 436
IHRD+++ANIL+
Sbjct: 127 IHRDLRSANILV 138
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 74/140 (52%), Gaps = 18/140 (12%)
Query: 305 NILGRGGFGKVYKG-RLADGKLVAVK---RLKEERTSGGELQFQTEVKI-ISMAVHRNLL 359
+LG G FG V+KG + +G+ + + ++ E+++ Q T+ + I H +++
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARGLSYL 416
RL G C + + LV Y+ GS+ +R+ + +L P L+W + A+G+ YL
Sbjct: 97 RLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNW------GVQIAKGMYYL 149
Query: 417 HEHCDPKIIHRDVKAANILL 436
EH ++HR++ A N+LL
Sbjct: 150 EEH---GMVHRNLAARNVLL 166
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 65/151 (43%), Gaps = 16/151 (10%)
Query: 296 VATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGE--LQFQT--EVKII 350
+AT + +G G +G VYK R G VA LK R GE L T EV ++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVA---LKSVRVPNGEEGLPISTVREVALL 57
Query: 351 ---SMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWP--TRKKI 405
H N++RL C T + + V LR PP P T K +
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 117
Query: 406 ALGSARGLSYLHEHCDPKIIHRDVKAANILL 436
RGL +LH +C I+HRD+K NIL+
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILV 145
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 24/154 (15%)
Query: 307 LGRGGFGKVY--------KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM-AVHRN 357
LG G FG+V K + + VAVK LK++ T +E++++ M H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 358 LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQS---------SLPPLDWPTRKKIALG 408
++ L G CT ++ Y + G++ LR R+ + P + T K +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 409 S---ARGLSYLHEHCDPKIIHRDVKAANILLDED 439
+ ARG+ YL K IHRD+ A N+L+ E+
Sbjct: 209 TYQLARGMEYLASQ---KCIHRDLAARNVLVTEN 239
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 19/145 (13%)
Query: 307 LGRGGFGKVYKGR-LADGKLVAVKR-LKEERTSGGELQFQTEVKIISMAVHRNLLRLYGF 364
+G+G FG+V+K R G+ VA+K+ L E G + E+KI+ + H N++ L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 365 CTTVTEKLLVYPY-MTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR--------GLSY 415
C T PY GS+ + L L K L + GL Y
Sbjct: 86 CRTKAS-----PYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 416 LHEHCDPKIIHRDVKAANILLDEDA 440
+H + KI+HRD+KAAN+L+ D
Sbjct: 141 IHRN---KILHRDMKAANVLITRDG 162
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 19/145 (13%)
Query: 307 LGRGGFGKVYKGR-LADGKLVAVKR-LKEERTSGGELQFQTEVKIISMAVHRNLLRLYGF 364
+G+G FG+V+K R G+ VA+K+ L E G + E+KI+ + H N++ L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 365 CTTVTEKLLVYPY-MTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR--------GLSY 415
C T PY GS+ + L L K L + GL Y
Sbjct: 85 CRTKAS-----PYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 139
Query: 416 LHEHCDPKIIHRDVKAANILLDEDA 440
+H + KI+HRD+KAAN+L+ D
Sbjct: 140 IHRN---KILHRDMKAANVLITRDG 161
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 307 LGRGGFGKVY--------KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM-AVHRN 357
LG G FG+V K + VAVK LK + T +E++++ M H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 358 LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRER-----QSSLPPLDWPTRK-------KI 405
++ L G CT ++ Y + G++ L+ R + S P P +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 406 ALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
A ARG+ YL K IHRD+ A N+L+ ED
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTED 227
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 304 KNILGRGGFGKVYKGRL------ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRN 357
K LG G FGKV+ D LVAVK LK+ T FQ E ++++ H +
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP-TLAARKDFQREAELLTNLQHEH 78
Query: 358 LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRER-QSSLPPLDWPTRK-----------KI 405
+++ YG C ++V+ YM +G + LR ++ +D R+ I
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 406 ALGSARGLSYLHEHCDPKIIHRDVKAANILL 436
A A G+ YL +HRD+ N L+
Sbjct: 139 ASQIASGMVYL---ASQHFVHRDLATRNCLV 166
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 8/132 (6%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG G FG+V+ G VAVK LK+ S F E ++ H+ L+RLY T
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYAVVT 74
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIH 426
++ YM NGS+ L + S L +A A G++++ E IH
Sbjct: 75 Q-EPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 128
Query: 427 RDVKAANILLDE 438
R+++AANIL+ +
Sbjct: 129 RNLRAANILVSD 140
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 65/151 (43%), Gaps = 16/151 (10%)
Query: 296 VATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGE--LQFQT--EVKII 350
+AT + +G G +G VYK R G VA LK R GE L T EV ++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVA---LKSVRVPNGEEGLPISTVREVALL 57
Query: 351 ---SMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWP--TRKKI 405
H N++RL C T + + V LR PP P T K +
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 117
Query: 406 ALGSARGLSYLHEHCDPKIIHRDVKAANILL 436
RGL +LH +C I+HRD+K NIL+
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILV 145
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 65/151 (43%), Gaps = 16/151 (10%)
Query: 296 VATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGE--LQFQT--EVKII 350
+AT + +G G +G VYK R G VA LK R GE L T EV ++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVA---LKSVRVPNGEEGLPISTVREVALL 57
Query: 351 ---SMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWP--TRKKI 405
H N++RL C T + + V LR PP P T K +
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 117
Query: 406 ALGSARGLSYLHEHCDPKIIHRDVKAANILL 436
RGL +LH +C I+HRD+K NIL+
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILV 145
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 74/140 (52%), Gaps = 18/140 (12%)
Query: 305 NILGRGGFGKVYKG-RLADGKLVAVK---RLKEERTSGGELQFQTEVKI-ISMAVHRNLL 359
+LG G FG V+KG + +G+ + + ++ E+++ Q T+ + I H +++
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP---LDWPTRKKIALGSARGLSYL 416
RL G C + + LV Y+ GS+ +R+ + +L P L+W + A+G+ YL
Sbjct: 79 RLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNW------GVQIAKGMYYL 131
Query: 417 HEHCDPKIIHRDVKAANILL 436
EH ++HR++ A N+LL
Sbjct: 132 EEH---GMVHRNLAARNVLL 148
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 12/135 (8%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG+G FG+V+ G VA+K LK S F E +++ H L++LY
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYA--- 329
Query: 367 TVTEK--LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI 424
V+E+ +V YM+ GS+ L+ L P +A A G++Y+
Sbjct: 330 VVSEEPIYIVTEYMSKGSLLDFLKGETGKY--LRLPQLVDMAAQIASGMAYVERM---NY 384
Query: 425 IHRDVKAANILLDED 439
+HRD++AANIL+ E+
Sbjct: 385 VHRDLRAANILVGEN 399
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 12/135 (8%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG+G FG+V+ G VA+K LK S F E +++ H L++LY
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYA--- 246
Query: 367 TVTEK--LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI 424
V+E+ +V YM+ GS+ L+ L P +A A G++Y+
Sbjct: 247 VVSEEPIYIVGEYMSKGSLLDFLKGETGKY--LRLPQLVDMAAQIASGMAYVERM---NY 301
Query: 425 IHRDVKAANILLDED 439
+HRD++AANIL+ E+
Sbjct: 302 VHRDLRAANILVGEN 316
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 307 LGRGGFGKVY--------KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM-AVHRN 357
LG G FG+V K + VAVK LK + T +E++++ M H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 358 LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRER-----QSSLPPLDWPTRK-------KI 405
++ L G CT ++ Y + G++ L+ R + S P P +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 406 ALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
A ARG+ YL K IHRD+ A N+L+ ED
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTED 175
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 307 LGRGGFGKVY--------KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM-AVHRN 357
LG G FG+V K + VAVK LK + T +E++++ M H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 358 LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRER-----QSSLPPLDWPTRK-------KI 405
++ L G CT ++ Y + G++ L+ R + S P P +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 406 ALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
A ARG+ YL K IHRD+ A N+L+ ED
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTED 179
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 307 LGRGGFGKVY--------KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM-AVHRN 357
LG G FG+V K + VAVK LK + T +E++++ M H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 358 LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRER-----QSSLPPLDWPTRK-------KI 405
++ L G CT ++ Y + G++ L+ R + S P P +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 406 ALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
A ARG+ YL K IHRD+ A N+L+ ED
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTED 186
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 307 LGRGGFGKVY--------KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM-AVHRN 357
LG G FG+V K + VAVK LK + T +E++++ M H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 358 LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRER-----QSSLPPLDWPTRK-------KI 405
++ L G CT ++ Y + G++ L+ R + S P P +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 406 ALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
A ARG+ YL K IHRD+ A N+L+ ED
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTED 178
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 19/145 (13%)
Query: 307 LGRGGFGKVYKGR-LADGKLVAVKR-LKEERTSGGELQFQTEVKIISMAVHRNLLRLYGF 364
+G+G FG+V+K R G+ VA+K+ L E G + E+KI+ + H N++ L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 365 CTTVTEKLLVYPY-MTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR--------GLSY 415
C T PY GS+ + L L K L + GL Y
Sbjct: 86 CRTKAS-----PYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 416 LHEHCDPKIIHRDVKAANILLDEDA 440
+H + KI+HRD+KAAN+L+ D
Sbjct: 141 IHRN---KILHRDMKAANVLITRDG 162
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 12/140 (8%)
Query: 305 NILGRGGFGKVYK-GRLADGKLVAVKRLK--EERTSGGELQFQTEVKIISMAVHRNLLRL 361
+LG+G FG+ K G+++ +K L +E T + F EVK++ H N+L+
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEET---QRTFLKEVKVMRCLEHPNVLKF 72
Query: 362 YGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCD 421
G + Y+ G++ ++ S P W R A A G++YLH
Sbjct: 73 IGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYP---WSQRVSFAKDIASGMAYLHSM-- 127
Query: 422 PKIIHRDVKAANILLDEDAD 441
IIHRD+ + N L+ E+ +
Sbjct: 128 -NIIHRDLNSHNCLVRENKN 146
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG+G FG+V+ G VA+K LK S F E +++ H L++LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--AFLQEAQVMKKLRHEKLVQLYA--- 80
Query: 367 TVTEK--LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI 424
V+E+ +V YM+ GS+ L+ L P +A A G++Y+
Sbjct: 81 VVSEEPIYIVTEYMSKGSLLDFLKGEMGKY--LRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 425 IHRDVKAANILLDED 439
+HRD+ AANIL+ E+
Sbjct: 136 VHRDLAAANILVGEN 150
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 29/175 (16%)
Query: 283 LGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRL---ADG---KLVAVKRLKEERT 336
+ Q K+ L+E+ ++ F + LG FGKVYKG L A G + VA+K LK++
Sbjct: 12 INQHKQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE 69
Query: 337 SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRL--------- 387
+F+ E + + H N++ L G T +++ Y ++G + L
Sbjct: 70 GPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDV 129
Query: 388 ------RERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL 436
R +S+L P P + A G+ YL H ++H+D+ N+L+
Sbjct: 130 GSTDDDRTVKSALEP---PDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLV 178
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 304 KNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRL 361
+ +G+G F KV R + G+ VAVK + + + + LQ EV+I+ + H N+++L
Sbjct: 20 QKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 79
Query: 362 YGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCD 421
+ T LV Y + G V L ++K A R + ++C
Sbjct: 80 FEVIETEKTLYLVMEYASGGEVFDYLVAHGR--------MKEKEARAKFRQIVSAVQYCH 131
Query: 422 PK-IIHRDVKAANILLDED 439
K I+HRD+KA N+LLD D
Sbjct: 132 QKYIVHRDLKAENLLLDGD 150
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG+G FG+V+ G VA+K LK S F E +++ H L++LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--AFLQEAQVMKKLRHEKLVQLYA--- 80
Query: 367 TVTEK--LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI 424
V+E+ +V YM+ G + L+ L P +A A G++Y+
Sbjct: 81 VVSEEPIYIVMEYMSKGCLLDFLKGEMGKY--LRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 425 IHRDVKAANILLDED 439
+HRD++AANIL+ E+
Sbjct: 136 VHRDLRAANILVGEN 150
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 24/154 (15%)
Query: 307 LGRGGFGKVY--------KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM-AVHRN 357
LG G FG+V K + VAVK LK + T +E++++ M H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 358 LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQ---------SSLPPLDWPTRKKI--- 405
++ L G CT ++ Y + G++ L+ R+ S P + + K +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 406 ALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
A ARG+ YL K IHRD+ A N+L+ ED
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTED 171
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 24/154 (15%)
Query: 307 LGRGGFGKVY--------KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM-AVHRN 357
LG G FG+V K + VAVK LK + T +E++++ M H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 358 LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQ---------SSLPPLDWPTRKKI--- 405
++ L G CT ++ Y + G++ L+ R+ S P + + K +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 406 ALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
A ARG+ YL K IHRD+ A N+L+ ED
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTED 186
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG G FGKVYK + + +A ++ E ++ + E++I++ H +++L G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIH 426
+ ++ + G+V + + E L P + + L++LH +IIH
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTE---PQIQVVCRQMLEALNFLHSK---RIIH 132
Query: 427 RDVKAANILLDEDAD 441
RD+KA N+L+ + D
Sbjct: 133 RDLKAGNVLMTLEGD 147
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG+G FG+V+ G VA+K LK S F E +++ H L++LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--AFLQEAQVMKKLRHEKLVQLYA--- 80
Query: 367 TVTEK--LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI 424
V+E+ +V YM+ G + L+ L P +A A G++Y+
Sbjct: 81 VVSEEPIYIVTEYMSKGCLLDFLKGEMGKY--LRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 425 IHRDVKAANILLDED 439
+HRD++AANIL+ E+
Sbjct: 136 VHRDLRAANILVGEN 150
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 11/138 (7%)
Query: 307 LGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLYGF 364
+G+G F KV R + G+ VA+K + + + + LQ EV+I+ + H N+++L+
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 365 CTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK- 423
T L+ Y + G V L ++K A R + ++C K
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGR--------MKEKEARSKFRQIVSAVQYCHQKR 134
Query: 424 IIHRDVKAANILLDEDAD 441
I+HRD+KA N+LLD D +
Sbjct: 135 IVHRDLKAENLLLDADMN 152
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 19/142 (13%)
Query: 307 LGRGGFGKVY-----KGRLADGKLVAVKRLKEERTSGGELQ--FQTEVKIISMAVHRNLL 359
LG G FGKV G++VAVK LKE G +L+ +Q E++I+ H +++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKE--GCGPQLRSGWQREIEILRTLYHEHIV 73
Query: 360 RLYGFCTTVTEK--LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLH 417
+ G C EK LV Y+ GS+ L L L A G++YLH
Sbjct: 74 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL-----LLFAQQICEGMAYLH 128
Query: 418 EHCDPKIIHRDVKAANILLDED 439
IHR + A N+LLD D
Sbjct: 129 AQ---HYIHRALAARNVLLDND 147
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 19/142 (13%)
Query: 307 LGRGGFGKVY-----KGRLADGKLVAVKRLKEERTSGGELQ--FQTEVKIISMAVHRNLL 359
LG G FGKV G++VAVK LKE G +L+ +Q E++I+ H +++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKE--GCGPQLRSGWQREIEILRTLYHEHIV 74
Query: 360 RLYGFCTTVTEK--LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLH 417
+ G C EK LV Y+ GS+ L L L A G++YLH
Sbjct: 75 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL-----LLFAQQICEGMAYLH 129
Query: 418 EHCDPKIIHRDVKAANILLDED 439
IHR + A N+LLD D
Sbjct: 130 AQ---HYIHRALAARNVLLDND 148
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG+G FG+V+ G VA+K LK S F E +++ H L++LY
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--AFLQEAQVMKKLRHEKLVQLYA--- 77
Query: 367 TVTEK--LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI 424
V+E+ +V YM GS+ L+ L P ++ A G++Y+
Sbjct: 78 VVSEEPIYIVTEYMNKGSLLDFLKGETGKY--LRLPQLVDMSAQIASGMAYVERM---NY 132
Query: 425 IHRDVKAANILLDED 439
+HRD++AANIL+ E+
Sbjct: 133 VHRDLRAANILVGEN 147
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG+G FG+V+ G VA+K LK S F E +++ H L++LY
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--AFLQEAQVMKKLRHEKLVQLYA--- 77
Query: 367 TVTEK--LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI 424
V+E+ +V YM GS+ L+ L P ++ A G++Y+
Sbjct: 78 VVSEEPIYIVTEYMNKGSLLDFLKGETGKY--LRLPQLVDMSAQIASGMAYVERM---NY 132
Query: 425 IHRDVKAANILLDED 439
+HRD++AANIL+ E+
Sbjct: 133 VHRDLRAANILVGEN 147
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 11/138 (7%)
Query: 307 LGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLYGF 364
+G+G F KV R + G+ VA+K + + + + LQ EV+I+ + H N+++L+
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 365 CTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK- 423
T L+ Y + G V L ++K A R + ++C K
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGR--------MKEKEARSKFRQIVSAVQYCHQKR 131
Query: 424 IIHRDVKAANILLDEDAD 441
I+HRD+KA N+LLD D +
Sbjct: 132 IVHRDLKAENLLLDADMN 149
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 17/144 (11%)
Query: 307 LGRGGFGKVYKGR-LADGKLVAVKR-LKEERTSGGELQFQTEVKIISMAVHRNLLRLYGF 364
+G+G FG+V+K R G+ VA+K+ L E G + E+KI+ + H N++ L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 365 CTTVTEKL--------LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYL 416
C T LV+ + + +A L + L K++ GL Y+
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEH-DLAGLL---SNVLVKFTLSEIKRVMQMLLNGLYYI 141
Query: 417 HEHCDPKIIHRDVKAANILLDEDA 440
H + KI+HRD+KAAN+L+ D
Sbjct: 142 HRN---KILHRDMKAANVLITRDG 162
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 70/136 (51%), Gaps = 10/136 (7%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAVHRNLLRLYGFC 365
+G G +G VYK + + G++VA+KR++ + G E+ ++ H N++ L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 366 TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS-ARGLSYLHEHCDPKI 424
+ LV+ +M + L E ++ L ++ KI L RG+++ H+H +I
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVLDENKTGLQ----DSQIKIYLYQLLRGVAHCHQH---RI 140
Query: 425 IHRDVKAANILLDEDA 440
+HRD+K N+L++ D
Sbjct: 141 LHRDLKPQNLLINSDG 156
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 290 SLRELQVATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVK 348
L E D ++ +LG+G +G VY GR L++ +A+K + ER S E+
Sbjct: 13 DLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIP-ERDSRYSQPLHEEIA 71
Query: 349 IISMAVHRNLLRLYGFCTTVTEKLLVYPYMTN---GSVASRLRERQSSLPPLDWPTRKKI 405
+ H+N+++ G + +E + +M GS+++ LR + L + I
Sbjct: 72 LHKHLKHKNIVQYLG---SFSENGFIKIFMEQVPGGSLSALLRSKWGPLK----DNEQTI 124
Query: 406 ALGSAR---GLSYLHEHCDPKIIHRDVKAANILLD 437
+ + GL YLH D +I+HRD+K N+L++
Sbjct: 125 GFYTKQILEGLKYLH---DNQIVHRDIKGDNVLIN 156
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 24/140 (17%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG G G+V+ G VAVK LK+ S F E ++ H+ L+RLY T
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS--------ARGLSYLHE 418
++ YM NGS+ L+ P+ K+ + A G++++ E
Sbjct: 79 Q-EPIYIITEYMENGSLVDFLKT----------PSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 419 HCDPKIIHRDVKAANILLDE 438
IHRD++AANIL+ +
Sbjct: 128 R---NYIHRDLRAANILVSD 144
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG G FGKVYK + + +A ++ E ++ + E++I++ H +++L G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIH 426
+ ++ + G+V + + E L P + + L++LH +IIH
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTE---PQIQVVCRQMLEALNFLHSK---RIIH 140
Query: 427 RDVKAANILLDEDAD 441
RD+KA N+L+ + D
Sbjct: 141 RDLKAGNVLMTLEGD 155
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 74/152 (48%), Gaps = 18/152 (11%)
Query: 293 ELQVATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIIS 351
E D ++ +LG+G +G VY GR L++ +A+K + ER S E+ +
Sbjct: 2 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIP-ERDSRYSQPLHEEIALHK 60
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTN---GSVASRLRERQSSLPPLDWPTRKKIALG 408
H+N+++ G + +E + +M GS+++ LR + L + I
Sbjct: 61 HLKHKNIVQYLG---SFSENGFIKIFMEQVPGGSLSALLRSKWGPLK----DNEQTIGFY 113
Query: 409 SAR---GLSYLHEHCDPKIIHRDVKAANILLD 437
+ + GL YLH D +I+HRD+K N+L++
Sbjct: 114 TKQILEGLKYLH---DNQIVHRDIKGDNVLIN 142
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 70/136 (51%), Gaps = 10/136 (7%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAVHRNLLRLYGFC 365
+G G +G VYK + + G++VA+KR++ + G E+ ++ H N++ L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 366 TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS-ARGLSYLHEHCDPKI 424
+ LV+ +M + L E ++ L ++ KI L RG+++ H+H +I
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVLDENKTGLQ----DSQIKIYLYQLLRGVAHCHQH---RI 140
Query: 425 IHRDVKAANILLDEDA 440
+HRD+K N+L++ D
Sbjct: 141 LHRDLKPQNLLINSDG 156
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 66/151 (43%), Gaps = 13/151 (8%)
Query: 296 VATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVK--RLKEERTSGGELQFQT--EVKII 350
+AT + +G G +G VYK R G VA+K R+ GG L T EV ++
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL 65
Query: 351 ---SMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWP--TRKKI 405
H N++RL C T + + V LR PP P T K +
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 125
Query: 406 ALGSARGLSYLHEHCDPKIIHRDVKAANILL 436
RGL +LH +C I+HRD+K NIL+
Sbjct: 126 MRQFLRGLDFLHANC---IVHRDLKPENILV 153
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 31/158 (19%)
Query: 306 ILGRGGFGKVYKG------RLADGKLVAVKRLKEERTSGGELQFQTEVKIIS-MAVHRNL 358
+LG G FGKV + VAVK LKE+ S +E+K+++ + H N+
Sbjct: 52 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 111
Query: 359 LRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQS--SLPPLDWPTRKKI----------- 405
+ L G CT L++ Y G + + LR ++ S +++ +K++
Sbjct: 112 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 171
Query: 406 ------ALGSARGLSYLH-EHCDPKIIHRDVKAANILL 436
A A+G+ +L + C +HRD+ A N+L+
Sbjct: 172 EDLLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLV 205
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 61/140 (43%), Gaps = 15/140 (10%)
Query: 307 LGRGGFGKVY-----KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
LG G FGKV G++VAVK LK + ++ E+ I+ H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 362 YGFCTTVTEK--LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH 419
G C EK LV Y+ GS+ L L L A G++YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICEGMAYLHSQ 136
Query: 420 CDPKIIHRDVKAANILLDED 439
IHR++ A N+LLD D
Sbjct: 137 ---HYIHRNLAARNVLLDND 153
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 59/138 (42%), Gaps = 10/138 (7%)
Query: 299 DGFSNKNILGRGGFGKVYKGRLADGK-LVAVKRL--KEERTSGGELQFQTEVKIISMAVH 355
D F LG+G FG VY R +VA+K L + G E Q + E++I + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415
N+LRLY + L+ Y G + L++ + D I A L Y
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCT----FDEQRTATIMEELADALMY 138
Query: 416 LHEHCDPKIIHRDVKAAN 433
H K+IHRD+K N
Sbjct: 139 CH---GKKVIHRDIKPEN 153
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 13/140 (9%)
Query: 307 LGRGGFGKVYKGRLA-----DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
LG G FGKV R G+ VAVK LK E + E++I+ H N+++
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 362 YGFCTTVTEK--LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH 419
G CT L+ ++ +GS+ L + ++ ++ + K A+ +G+ YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK---INLKQQLKYAVQICKGMDYLGSR 133
Query: 420 CDPKIIHRDVKAANILLDED 439
+ +HRD+ A N+L++ +
Sbjct: 134 ---QYVHRDLAARNVLVESE 150
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 61/140 (43%), Gaps = 15/140 (10%)
Query: 307 LGRGGFGKVY-----KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
LG G FGKV G++VAVK LK + ++ E+ I+ H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 362 YGFCTTVTEK--LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH 419
G C EK LV Y+ GS+ L L L A G++YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICEGMAYLHAQ 136
Query: 420 CDPKIIHRDVKAANILLDED 439
IHR++ A N+LLD D
Sbjct: 137 ---HYIHRNLAARNVLLDND 153
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 13/140 (9%)
Query: 307 LGRGGFGKVYKGRLA-----DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
LG G FGKV R G+ VAVK LK E + E++I+ H N+++
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 362 YGFCTTVTEK--LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH 419
G CT L+ ++ +GS+ L + ++ ++ + K A+ +G+ YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK---INLKQQLKYAVQICKGMDYLGSR 145
Query: 420 CDPKIIHRDVKAANILLDED 439
+ +HRD+ A N+L++ +
Sbjct: 146 ---QYVHRDLAARNVLVESE 162
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 25/146 (17%)
Query: 305 NILGRGGFGKVYKGRLADGKLVAVKRLK-EERTSGGELQFQTEVKIISMA--VHRNLLRL 361
+ RG FG V+K +L + + VAVK +++ S +Q E ++ S+ H N+L+
Sbjct: 30 EVKARGRFGCVWKAQLLN-EYVAVKIFPIQDKQS-----WQNEYEVYSLPGMKHENILQF 83
Query: 362 YGF---CTTVTEKL-LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLH 417
G T+V L L+ + GS++ L+ S W IA ARGL+YLH
Sbjct: 84 IGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVS-----WNELCHIAETMARGLAYLH 138
Query: 418 EHC-------DPKIIHRDVKAANILL 436
E P I HRD+K+ N+LL
Sbjct: 139 EDIPGLKDGHKPAISHRDIKSKNVLL 164
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 23/170 (13%)
Query: 278 DSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTS 337
DS L L ++K + +V T + ++G+G FG VY G D ++ + +
Sbjct: 4 DSAL-LAEVKDVLIPHERVVT---HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSR 59
Query: 338 GGELQ----FQTEVKIISMAVHRNLLRLYGFCTTVTEKL--LVYPYMTNGSVASRLRERQ 391
E+Q F E ++ H N+L L G E L ++ PYM +G + +R Q
Sbjct: 60 ITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLP-PEGLPHVLLPYMCHGDLLQFIRSPQ 118
Query: 392 SSLPPLDWPTRKKI---ALGSARGLSYLHEHCDPKIIHRDVKAANILLDE 438
+ PT K + L ARG+ YL E K +HRD+ A N +LDE
Sbjct: 119 RN------PTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDE 159
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 11/144 (7%)
Query: 302 SNKNILGRGGFGKVYK-GRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
S ILG G FG+V+K A G +A K +K E + + E+ +++ H NL++
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKE-EVKNEISVMNQLDHANLIQ 150
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPT-RKKIALGSARGLSYLHEH 419
LY + + +LV Y+ G + R+ + +L LD K+I G+ ++H+
Sbjct: 151 LYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQI----CEGIRHMHQM 206
Query: 420 CDPKIIHRDVKAANIL-LDEDADQ 442
I+H D+K NIL ++ DA Q
Sbjct: 207 Y---ILHLDLKPENILCVNRDAKQ 227
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 22/165 (13%)
Query: 291 LRELQVATDGFSNKNILGRGGFGKVYKGRL--ADGKLV--AVKRLKEERTSGGELQ-FQT 345
L ++ + F+ +LG+G FG V + +L DG V AVK LK + + +++ F
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 346 EVKIISMAVHRNLLRLYGFCTTVTEK------LLVYPYMTNGSV-----ASRLRERQSSL 394
E + H ++ +L G K +++ P+M +G + ASR+ E +L
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 395 PPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
P T + + A G+ YL IHRD+ A N +L ED
Sbjct: 135 P---LQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAED 173
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 76/174 (43%), Gaps = 34/174 (19%)
Query: 284 GQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRL---ADG---KLVAVKRLKEERTS 337
G+LK SL ++ + LG FGKVYKG L A G + VA+K LK++
Sbjct: 1 GKLKEISLSAVRFMEE-------LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEG 53
Query: 338 GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRL---------- 387
+F+ E + + H N++ L G T +++ Y ++G + L
Sbjct: 54 PLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVG 113
Query: 388 -----RERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL 436
R +S+L P P + A G+ YL H ++H+D+ N+L+
Sbjct: 114 STDDDRTVKSALEP---PDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLV 161
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 16/143 (11%)
Query: 307 LGRGGFGKVYKGRL-----ADGKL-VAVKRLKEERTSGGELQFQTEVKIIS-MAVHRNLL 359
LG G FGKV + D L VAVK LK + + +E+KI+S + H N++
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRER------QSSLPPLDWPTRKKIALGSARGL 413
L G CT L++ Y G + + LR + + PL+ + A+G+
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 414 SYLHEHCDPKIIHRDVKAANILL 436
++L IHRDV A N+LL
Sbjct: 166 AFL---ASKNCIHRDVAARNVLL 185
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 72/146 (49%), Gaps = 8/146 (5%)
Query: 297 ATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAV 354
+ + F +G G +G VYK R G++VA+K+++ + T G E+ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 355 HRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
H N+++L T + LV+ ++ S+ + S+L + P K +GL+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 415 YLHEHCDPKIIHRDVKAANILLDEDA 440
+ H H +++HRD+K N+L++ +
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEG 141
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 72/146 (49%), Gaps = 8/146 (5%)
Query: 297 ATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAV 354
+ + F +G G +G VYK R G++VA+K+++ + T G E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 355 HRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
H N+++L T + LV+ ++ S+ + S+L + P K +GL+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 415 YLHEHCDPKIIHRDVKAANILLDEDA 440
+ H H +++HRD+K N+L++ +
Sbjct: 121 FCHSH---RVLHRDLKPENLLINTEG 143
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG G FG+V+ VAVK +K S F E ++ H L++L+ T
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE--AFLAEANVMKTLQHDKLVKLHAVVT 80
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIH 426
++ +M GS+ L+ + S PL P + A G++++ + IH
Sbjct: 81 K-EPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR---NYIH 134
Query: 427 RDVKAANILL 436
RD++AANIL+
Sbjct: 135 RDLRAANILV 144
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 16/143 (11%)
Query: 307 LGRGGFGKVYKGRL-----ADGKL-VAVKRLKEERTSGGELQFQTEVKIIS-MAVHRNLL 359
LG G FGKV + D L VAVK LK + + +E+KI+S + H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRER------QSSLPPLDWPTRKKIALGSARGL 413
L G CT L++ Y G + + LR + + PL+ + A+G+
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 173
Query: 414 SYLHEHCDPKIIHRDVKAANILL 436
++L IHRDV A N+LL
Sbjct: 174 AFL---ASKNCIHRDVAARNVLL 193
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 72/146 (49%), Gaps = 8/146 (5%)
Query: 297 ATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAV 354
+ + F +G G +G VYK R G++VA+K+++ + T G E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 355 HRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
H N+++L T + LV+ ++ S+ + S+L + P K +GL+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 415 YLHEHCDPKIIHRDVKAANILLDEDA 440
+ H H +++HRD+K N+L++ +
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEG 143
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQT-EVKIISMAVHRNLLRLYGFC 365
+G G +G VYK + G+ A+K+++ E+ G E+ I+ H N+++LY
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 366 TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKII 425
T +LV+ ++ + + L + L + T K L G++Y H D +++
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLDVCEGGLESV---TAKSFLLQLLNGIAYCH---DRRVL 122
Query: 426 HRDVKAANILLDEDAD 441
HRD+K N+L++ + +
Sbjct: 123 HRDLKPQNLLINREGE 138
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 72/146 (49%), Gaps = 8/146 (5%)
Query: 297 ATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAV 354
+ + F +G G +G VYK R G++VA+K+++ + T G E+ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 355 HRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
H N+++L T + LV+ ++ S+ + S+L + P K +GL+
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 415 YLHEHCDPKIIHRDVKAANILLDEDA 440
+ H H +++HRD+K N+L++ +
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEG 142
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQT-EVKIISMAVHRNLLRLYGFC 365
+G G +G VYK + G+ A+K+++ E+ G E+ I+ H N+++LY
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 366 TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKII 425
T +LV+ ++ + + L + L + T K L G++Y H D +++
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLDVCEGGLESV---TAKSFLLQLLNGIAYCH---DRRVL 122
Query: 426 HRDVKAANILLDEDAD 441
HRD+K N+L++ + +
Sbjct: 123 HRDLKPQNLLINREGE 138
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 59/140 (42%), Gaps = 15/140 (10%)
Query: 307 LGRGGFGKVY-----KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
LG G FGKV G++VAVK LK + ++ E+ I+ H ++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 362 YGFCTTVTEK--LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH 419
G C LV Y+ GS+ L L L A G++YLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICEGMAYLHAQ 153
Query: 420 CDPKIIHRDVKAANILLDED 439
IHRD+ A N+LLD D
Sbjct: 154 ---HYIHRDLAARNVLLDND 170
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQT-EVKIISMAVHRNLLRLYGFC 365
+G G +G VYK + G+ A+K+++ E+ G E+ I+ H N+++LY
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 366 TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKII 425
T +LV+ ++ + + L + L + T K L G++Y H D +++
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLDVCEGGLESV---TAKSFLLQLLNGIAYCH---DRRVL 122
Query: 426 HRDVKAANILLDEDAD 441
HRD+K N+L++ + +
Sbjct: 123 HRDLKPQNLLINREGE 138
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 76/179 (42%), Gaps = 29/179 (16%)
Query: 277 DDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRL-----ADGKL-VAVKR 330
D ++L + F LQ LG G FGKV + D L VAVK
Sbjct: 31 DPTQLPYNEKWEFPRNNLQFG-------KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKM 83
Query: 331 LKEERTSGGELQFQTEVKIIS-MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRE 389
LK + + +E+KI+S + H N++ L G CT L++ Y G + + LR
Sbjct: 84 LKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRR 143
Query: 390 RQ----------SSLPPLDWPTRKKIALGS--ARGLSYLHEHCDPKIIHRDVKAANILL 436
++ S P +R + S A+G+++L IHRDV A N+LL
Sbjct: 144 KRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLL 199
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 23/146 (15%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
+G+G +G+V+ G+ G+ VAVK T +TE+ + H N+L GF
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFT--TEEASWFRETEIYQTVLMRHENIL---GFIA 98
Query: 367 -------TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH 419
+ T+ L+ Y NGS+ L+ LD + K+A S GL +LH
Sbjct: 99 ADIKGTGSWTQLYLITDYHENGSLYDYLKSTT-----LDAKSMLKLAYSSVSGLCHLHTE 153
Query: 420 C-----DPKIIHRDVKAANILLDEDA 440
P I HRD+K+ NIL+ ++
Sbjct: 154 IFSTQGKPAIAHRDLKSKNILVKKNG 179
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG G FG+V+ VAVK +K S F E ++ H L++L+ T
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE--AFLAEANVMKTLQHDKLVKLHAVVT 247
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIH 426
++ +M GS+ L+ + S PL P + A G++++ + IH
Sbjct: 248 K-EPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR---NYIH 301
Query: 427 RDVKAANILL 436
RD++AANIL+
Sbjct: 302 RDLRAANILV 311
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 80/161 (49%), Gaps = 20/161 (12%)
Query: 296 VATDGFSNKNILGRGGFGKVY------KGRLADGKLVAVKRLKEERTSGGELQFQTEVKI 349
+ +D + + +LG+G FG+V G+ K+++ +++K++ L+ EV++
Sbjct: 29 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR---EVQL 85
Query: 350 ISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRL--RERQSSLPPLDWPTRKKIAL 407
+ H N+++LY F LV T G + + R+R S + +I
Sbjct: 86 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA------RIIR 139
Query: 408 GSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 448
G++Y+H++ KI+HRD+K N+LL+ + ++ I+
Sbjct: 140 QVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRII 177
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 29/162 (17%)
Query: 294 LQVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLK--EERTSGGELQFQTEVKII 350
L+ A+D F +LG+G FG+V K R A D + A+K+++ EE+ S +EV ++
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS----TILSEVMLL 56
Query: 351 SMAVHRNLLRLYGFC----------TTVTEKLLVY---PYMTNGSVASRLR-ERQSSLPP 396
+ H+ ++R Y T V +K ++ Y NG++ + E +
Sbjct: 57 ASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRD 116
Query: 397 LDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE 438
W ++I LSY+H IIHRD+K NI +DE
Sbjct: 117 EYWRLFRQIL----EALSYIHSQG---IIHRDLKPMNIFIDE 151
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 69/148 (46%), Gaps = 22/148 (14%)
Query: 307 LGRGGFGKVYKGRL-----ADGKL-VAVKRLKEERTSGGELQFQTEVKIIS-MAVHRNLL 359
LG G FGKV + D L VAVK LK + + +E+KI+S + H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLD---------WPTRKKIALGS- 409
L G CT L++ Y G + + LR R+S + D TR + S
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLR-RKSRVLETDPAFAIANSTLSTRDLLHFSSQ 172
Query: 410 -ARGLSYLHEHCDPKIIHRDVKAANILL 436
A+G+++L IHRDV A N+LL
Sbjct: 173 VAQGMAFL---ASKNCIHRDVAARNVLL 197
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 17/138 (12%)
Query: 306 ILGRGGFGKVYKGRLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
ILG G FG+VY+G + K VAVK K++ T + +F +E I+ H ++++L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 362 YGFCTTVTEKLLV--YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE- 418
G +++ YPY G + L ++SL L T +L + ++YL
Sbjct: 75 IGIIEEEPTWIIMELYPY---GELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLESI 128
Query: 419 HCDPKIIHRDVKAANILL 436
+C +HRD+ NIL+
Sbjct: 129 NC----VHRDIAVRNILV 142
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366
LG G FG+V+ VAVK +K S F E ++ H L++L+ T
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE--AFLAEANVMKTLQHDKLVKLHAVVT 253
Query: 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIH 426
++ +M GS+ L+ + S PL P + A G++++ + IH
Sbjct: 254 K-EPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR---NYIH 307
Query: 427 RDVKAANILL 436
RD++AANIL+
Sbjct: 308 RDLRAANILV 317
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 10/134 (7%)
Query: 307 LGRGGFGKVYKGR--LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGF 364
LG G + VYKG+ L D LVA+K ++ E G EV ++ H N++ L+
Sbjct: 10 LGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 365 CTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI 424
T LV+ Y+ + + L + + ++ K RGL+Y H K+
Sbjct: 69 IHTEKSLTLVFEYL-DKDLKQYLDDCGNI---INMHNVKLFLFQLLRGLAYCHRQ---KV 121
Query: 425 IHRDVKAANILLDE 438
+HRD+K N+L++E
Sbjct: 122 LHRDLKPQNLLINE 135
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 17/138 (12%)
Query: 306 ILGRGGFGKVYKGRLADGKL----VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
ILG G FG+VY+G + K VAVK K++ T + +F +E I+ H ++++L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 362 YGFCTTVTEKLLV--YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE- 418
G +++ YPY G + L ++SL L T +L + ++YL
Sbjct: 79 IGIIEEEPTWIIMELYPY---GELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLESI 132
Query: 419 HCDPKIIHRDVKAANILL 436
+C +HRD+ NIL+
Sbjct: 133 NC----VHRDIAVRNILV 146
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 69/148 (46%), Gaps = 22/148 (14%)
Query: 307 LGRGGFGKVYKGRL-----ADGKL-VAVKRLKEERTSGGELQFQTEVKIIS-MAVHRNLL 359
LG G FGKV + D L VAVK LK + + +E+KI+S + H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLD---------WPTRKKIALGS- 409
L G CT L++ Y G + + LR R+S + D TR + S
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLR-RKSRVLETDPAFAIANSTASTRDLLHFSSQ 172
Query: 410 -ARGLSYLHEHCDPKIIHRDVKAANILL 436
A+G+++L IHRDV A N+LL
Sbjct: 173 VAQGMAFL---ASKNCIHRDVAARNVLL 197
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 20/150 (13%)
Query: 296 VATDGFSNKNILGRGGFGKVY------KGRLADGKLVAVKRLKEERTSGGELQFQTEVKI 349
+ +D + + +LG+G FG+V G+ K+++ +++K++ L+ EV++
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR---EVQL 79
Query: 350 ISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRL--RERQSSLPPLDWPTRKKIAL 407
+ H N+++LY F LV T G + + R+R S + +I
Sbjct: 80 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA------RIIR 133
Query: 408 GSARGLSYLHEHCDPKIIHRDVKAANILLD 437
G++Y+H++ KI+HRD+K N+LL+
Sbjct: 134 QVLSGITYMHKN---KIVHRDLKPENLLLE 160
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAVHR 356
+ F +G G +G VYK R G++VA+K+++ + T G E+ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 357 NLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYL 416
N+++L T + LV+ ++ + S+L + P K +GLS+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 417 HEHCDPKIIHRDVKAANILLDEDA 440
H H +++HRD+K N+L++ +
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEG 140
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 17/138 (12%)
Query: 306 ILGRGGFGKVYKGRLADGKL----VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
ILG G FG+VY+G + K VAVK K++ T + +F +E I+ H ++++L
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 362 YGFCTTVTEKLLV--YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE- 418
G +++ YPY G + L ++SL L T +L + ++YL
Sbjct: 91 IGIIEEEPTWIIMELYPY---GELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLESI 144
Query: 419 HCDPKIIHRDVKAANILL 436
+C +HRD+ NIL+
Sbjct: 145 NC----VHRDIAVRNILV 158
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 30/160 (18%)
Query: 307 LGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFC 365
+G G G V + + GKLVAVK++ + EL F EV I+ H N++ +Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 86
Query: 366 TTVTEKLLVYPYMTNGSVA-----SRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
E +V ++ G++ +R+ E Q + + L + LS LH
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA----------AVCLAVLQALSVLHAQG 136
Query: 421 DPKIIHRDVKAANILLDEDA----------DQSSKTILRR 450
+IHRD+K+ +ILL D Q SK + RR
Sbjct: 137 ---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 173
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Query: 307 LGRGGFGKVYKG---RLAD-GKL----VAVKRLKEERTSGGELQFQTEVKIISMAVHRNL 358
LG+G F K++KG + D G+L V +K L + + E F+ ++S H++L
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEA-ASMMSKLSHKHL 74
Query: 359 LRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE 418
+ YG C E +LV ++ GS+ + L++ ++ + L W + ++A A + +L E
Sbjct: 75 VLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINIL-W--KLEVAKQLAAAMHFLEE 131
Query: 419 HCDPKIIHRDVKAANILLDEDADQSS 444
+ +IH +V A NILL + D+ +
Sbjct: 132 NT---LIHGNVCAKNILLIREEDRKT 154
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEE---RTSGGELQFQTEVKII 350
++ D F +LG+G FGKV R+ + G L AVK LK++ + E TE +I+
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTM-TEKRIL 77
Query: 351 SMAVHRNLLRLYGFCTTVTEKL-LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS 409
S+A + L C ++L V ++ G + +++ + D + A
Sbjct: 78 SLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR----FDEARARFYAAEI 133
Query: 410 ARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440
L +LH D II+RD+K N+LLD +
Sbjct: 134 ISALMFLH---DKGIIYRDLKLDNVLLDHEG 161
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 19/143 (13%)
Query: 304 KNILGRGGFGKV-----YKGRLADGKLVAVKRLKEE--RTSGGELQFQTEVKIISMAVHR 356
+ LG G FGKV YK + + VA+K + + + S ++ + E+ + + H
Sbjct: 14 RETLGEGSFGKVKLATHYKTQ----QKVALKFISRQLLKKSDMHMRVEREISYLKLLRHP 69
Query: 357 NLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYL 416
++++LY TT T+ ++V Y G + + E++ + ++ + Y
Sbjct: 70 HIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKR----MTEDEGRRFFQQIICAIEYC 124
Query: 417 HEHCDPKIIHRDVKAANILLDED 439
H H KI+HRD+K N+LLD++
Sbjct: 125 HRH---KIVHRDLKPENLLLDDN 144
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 12/148 (8%)
Query: 297 ATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAV 354
+ + F +G G +G VYK R G++VA+K+++ + T G E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 355 HRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRE--RQSSLPPLDWPTRKKIALGSARG 412
H N+++L T + LV+ ++ L++ S+L + P K +G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD-----LKDFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 413 LSYLHEHCDPKIIHRDVKAANILLDEDA 440
L++ H H +++HRD+K N+L++ +
Sbjct: 116 LAFCHSH---RVLHRDLKPENLLINTEG 140
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 30/160 (18%)
Query: 307 LGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFC 365
+G G G V + + GKLVAVK++ + EL F EV I+ H N++ +Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 95
Query: 366 TTVTEKLLVYPYMTNGSVA-----SRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
E +V ++ G++ +R+ E Q + + L + LS LH
Sbjct: 96 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA----------AVCLAVLQALSVLHAQG 145
Query: 421 DPKIIHRDVKAANILLDEDA----------DQSSKTILRR 450
+IHRD+K+ +ILL D Q SK + RR
Sbjct: 146 ---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 182
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 296 VATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMA 353
V + F +G G +G VYK R G++VA+K+++ + T G E+ ++
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 354 VHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRE--RQSSLPPLDWPTRKKIALGSAR 411
H N+++L T + LV+ ++ L++ S+L + P K +
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 118
Query: 412 GLSYLHEHCDPKIIHRDVKAANILLDEDA 440
GL++ H H +++HRD+K N+L++ +
Sbjct: 119 GLAFCHSH---RVLHRDLKPQNLLINTEG 144
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 8/146 (5%)
Query: 297 ATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAV 354
+ + F +G G +G VYK R G++VA+K+++ + T G E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 355 HRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
H N+++L T + LV+ ++ + S+L + P K +GL+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDL---KTFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 415 YLHEHCDPKIIHRDVKAANILLDEDA 440
+ H H +++HRD+K N+L++ +
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEG 143
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 30/160 (18%)
Query: 307 LGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFC 365
+G G G V + + GKLVAVK++ + EL F EV I+ H N++ +Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 90
Query: 366 TTVTEKLLVYPYMTNGSVA-----SRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
E +V ++ G++ +R+ E Q + + L + LS LH
Sbjct: 91 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA----------AVCLAVLQALSVLHAQG 140
Query: 421 DPKIIHRDVKAANILLDEDA----------DQSSKTILRR 450
+IHRD+K+ +ILL D Q SK + RR
Sbjct: 141 ---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 177
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 14/136 (10%)
Query: 307 LGRGGFGKVYKGRLADGKL----VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
LG G +G+V +LA ++ VAVK + +R + E+ I +M H N+++ Y
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFY 71
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
G + L Y + G + R+ E +P P ++ G+ YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPE---PDAQRFFHQLMAGVVYLH---GI 124
Query: 423 KIIHRDVKAANILLDE 438
I HRD+K N+LLDE
Sbjct: 125 GITHRDIKPENLLLDE 140
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 30/160 (18%)
Query: 307 LGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFC 365
+G G G V + + GKLVAVK++ + EL F EV I+ H N++ +Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 97
Query: 366 TTVTEKLLVYPYMTNGSVA-----SRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
E +V ++ G++ +R+ E Q + + L + LS LH
Sbjct: 98 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA----------AVCLAVLQALSVLHAQG 147
Query: 421 DPKIIHRDVKAANILLDEDA----------DQSSKTILRR 450
+IHRD+K+ +ILL D Q SK + RR
Sbjct: 148 ---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 184
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 67/151 (44%), Gaps = 28/151 (18%)
Query: 305 NILGRGGFGKVYKGRLADGKLVAVK--RLKEERTSGGELQFQTEVKIISMA--VHRNLLR 360
I RG FG V+K +L + VAVK L+++++ +Q+E +I S H NLL+
Sbjct: 21 EIKARGRFGCVWKAQLMN-DFVAVKIFPLQDKQS------WQSEREIFSTPGMKHENLLQ 73
Query: 361 LYGF----CTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYL 416
E L+ + GS+ L+ + W +A +RGLSYL
Sbjct: 74 FIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNI-----ITWNELCHVAETMSRGLSYL 128
Query: 417 HEHC--------DPKIIHRDVKAANILLDED 439
HE P I HRD K+ N+LL D
Sbjct: 129 HEDVPWCRGEGHKPSIAHRDFKSKNVLLKSD 159
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 8/146 (5%)
Query: 297 ATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAV 354
+ + F +G G +G VYK R G++VA+K+++ + T G E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 355 HRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
H N+++L T + LV+ ++ + S+L + P K +GL+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 415 YLHEHCDPKIIHRDVKAANILLDEDA 440
+ H H +++HRD+K N+L++ +
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEG 140
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 20/150 (13%)
Query: 296 VATDGFSNKNILGRGGFGKVY------KGRLADGKLVAVKRLKEERTSGGELQFQTEVKI 349
+ +D + + +LG+G FG+V G+ K+++ +++K++ L+ EV++
Sbjct: 46 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR---EVQL 102
Query: 350 ISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRL--RERQSSLPPLDWPTRKKIAL 407
+ H N+++LY F LV T G + + R+R S + +I
Sbjct: 103 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA------RIIR 156
Query: 408 GSARGLSYLHEHCDPKIIHRDVKAANILLD 437
G++Y+H++ KI+HRD+K N+LL+
Sbjct: 157 QVLSGITYMHKN---KIVHRDLKPENLLLE 183
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 307 LGRGGFGKVYKGRLADGKL----VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
LG G +G+V +LA ++ VAVK + +R + E+ I M H N+++ Y
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
G + L Y + G + R+ E +P P ++ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPE---PDAQRFFHQLMAGVVYLH---GI 123
Query: 423 KIIHRDVKAANILLDE 438
I HRD+K N+LLDE
Sbjct: 124 GITHRDIKPENLLLDE 139
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 20/161 (12%)
Query: 290 SLRELQVATDGFSNKN-------ILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGEL 341
+ EL+ G SN +GRG F VYKG + + VA L++ + + E
Sbjct: 10 DIEELETKAVGXSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSER 69
Query: 342 Q-FQTEVKIISMAVHRNLLRLY-GFCTTVTEK---LLVYPYMTNGSVASRLRE-RQSSLP 395
Q F+ E + + H N++R Y + +TV K +LV T+G++ + L+ + +
Sbjct: 70 QRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIK 129
Query: 396 PLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL 436
L R+ + +GL +LH P IIHRD+K NI +
Sbjct: 130 VLRSWCRQIL-----KGLQFLHTRT-PPIIHRDLKCDNIFI 164
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 8/146 (5%)
Query: 297 ATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAV 354
+ + F +G G +G VYK R G++VA+K+++ + T G E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 355 HRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
H N+++L T + LV+ ++ + S+L + P K +GL+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 415 YLHEHCDPKIIHRDVKAANILLDEDA 440
+ H H +++HRD+K N+L++ +
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEG 140
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 27/143 (18%)
Query: 307 LGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQ--FQTEVKIISMAVHRNLLRLYG 363
LG G FGKV G+ VA+K + ++ + ++Q + E+ + + H ++++LY
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR--------GLSY 415
+ E ++V Y N ++ R K++ AR + Y
Sbjct: 72 VIKSKDEIIMVIEYAGNELFDYIVQ-------------RDKMSEQEARRFFQQIISAVEY 118
Query: 416 LHEHCDPKIIHRDVKAANILLDE 438
H H KI+HRD+K N+LLDE
Sbjct: 119 CHRH---KIVHRDLKPENLLLDE 138
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 307 LGRGGFGKVYKGRLADGKL----VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
LG G +G+V +LA ++ VAVK + +R + E+ I M H N+++ Y
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
G + L Y + G + R+ E +P P ++ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPE---PDAQRFFHQLMAGVVYLH---GI 123
Query: 423 KIIHRDVKAANILLDE 438
I HRD+K N+LLDE
Sbjct: 124 GITHRDIKPENLLLDE 139
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 20/150 (13%)
Query: 296 VATDGFSNKNILGRGGFGKVY------KGRLADGKLVAVKRLKEERTSGGELQFQTEVKI 349
+ +D + + +LG+G FG+V G+ K+++ +++K++ L+ EV++
Sbjct: 47 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR---EVQL 103
Query: 350 ISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRL--RERQSSLPPLDWPTRKKIAL 407
+ H N+++LY F LV T G + + R+R S + +I
Sbjct: 104 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA------RIIR 157
Query: 408 GSARGLSYLHEHCDPKIIHRDVKAANILLD 437
G++Y+H++ KI+HRD+K N+LL+
Sbjct: 158 QVLSGITYMHKN---KIVHRDLKPENLLLE 184
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 8/146 (5%)
Query: 297 ATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAV 354
+ + F +G G +G VYK R G++VA+K+++ + T G E+ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 355 HRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
H N+++L T + LV+ ++ + S+L + P K +GL+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 415 YLHEHCDPKIIHRDVKAANILLDEDA 440
+ H H +++HRD+K N+L++ +
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEG 141
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 307 LGRGGFGKVYKGRLADGKL----VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
LG G +G+V +LA ++ VAVK + +R + E+ I M H N+++ Y
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 71
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
G + L Y + G + R+ E +P P ++ G+ YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPE---PDAQRFFHQLMAGVVYLH---GI 124
Query: 423 KIIHRDVKAANILLDE 438
I HRD+K N+LLDE
Sbjct: 125 GITHRDIKPENLLLDE 140
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 8/146 (5%)
Query: 297 ATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAV 354
+ + F +G G +G VYK R G++VA+K+++ + T G E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 355 HRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
H N+++L T + LV+ ++ + S+L + P K +GL+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 415 YLHEHCDPKIIHRDVKAANILLDEDA 440
+ H H +++HRD+K N+L++ +
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEG 143
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 8/146 (5%)
Query: 297 ATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAV 354
+ + F +G G +G VYK R G++VA+K+++ + T G E+ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 355 HRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
H N+++L T + LV+ ++ + S+L + P K +GL+
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 415 YLHEHCDPKIIHRDVKAANILLDEDA 440
+ H H +++HRD+K N+L++ +
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEG 142
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 8/146 (5%)
Query: 297 ATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAV 354
+ + F +G G +G VYK R G++VA+K+++ + T G E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 355 HRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
H N+++L T + LV+ ++ + S+L + P K +GL+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 415 YLHEHCDPKIIHRDVKAANILLDEDA 440
+ H H +++HRD+K N+L++ +
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEG 140
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 12/148 (8%)
Query: 297 ATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAV 354
+ + F +G G +G VYK R G++VA+K+++ + T G E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 355 HRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRE--RQSSLPPLDWPTRKKIALGSARG 412
H N+++L T + LV+ ++ L++ S+L + P K +G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 413 LSYLHEHCDPKIIHRDVKAANILLDEDA 440
L++ H H +++HRD+K N+L++ +
Sbjct: 116 LAFCHSH---RVLHRDLKPQNLLINTEG 140
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 8/146 (5%)
Query: 297 ATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAV 354
+ + F +G G +G VYK R G++VA+K+++ + T G E+ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 355 HRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
H N+++L T + LV+ ++ + S+L + P K +GL+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 415 YLHEHCDPKIIHRDVKAANILLDEDA 440
+ H H +++HRD+K N+L++ +
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEG 141
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 307 LGRGGFGKVYKGRLADGKL----VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
LG G +G+V +LA ++ VAVK + +R + E+ I M H N+++ Y
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
G + L Y + G + R+ E +P P ++ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPE---PDAQRFFHQLMAGVVYLH---GI 123
Query: 423 KIIHRDVKAANILLDE 438
I HRD+K N+LLDE
Sbjct: 124 GITHRDIKPENLLLDE 139
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 27/143 (18%)
Query: 307 LGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQ--FQTEVKIISMAVHRNLLRLYG 363
LG G FGKV G+ VA+K + ++ + ++Q + E+ + + H ++++LY
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR--------GLSY 415
+ E ++V Y N ++ R K++ AR + Y
Sbjct: 76 VIKSKDEIIMVIEYAGNELFDYIVQ-------------RDKMSEQEARRFFQQIISAVEY 122
Query: 416 LHEHCDPKIIHRDVKAANILLDE 438
H H KI+HRD+K N+LLDE
Sbjct: 123 CHRH---KIVHRDLKPENLLLDE 142
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 8/146 (5%)
Query: 297 ATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAV 354
+ + F +G G +G VYK R G++VA+K+++ + T G E+ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 355 HRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
H N+++L T + LV+ ++ + S+L + P K +GL+
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 415 YLHEHCDPKIIHRDVKAANILLDEDA 440
+ H H +++HRD+K N+L++ +
Sbjct: 120 FCHSH---RVLHRDLKPENLLINTEG 142
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 27/143 (18%)
Query: 307 LGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQ--FQTEVKIISMAVHRNLLRLYG 363
LG G FGKV G+ VA+K + ++ + ++Q + E+ + + H ++++LY
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR--------GLSY 415
+ E ++V Y N ++ R K++ AR + Y
Sbjct: 82 VIKSKDEIIMVIEYAGNELFDYIVQ-------------RDKMSEQEARRFFQQIISAVEY 128
Query: 416 LHEHCDPKIIHRDVKAANILLDE 438
H H KI+HRD+K N+LLDE
Sbjct: 129 CHRH---KIVHRDLKPENLLLDE 148
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 8/146 (5%)
Query: 297 ATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAV 354
+ + F +G G +G VYK R G++VA+K+++ + T G E+ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 355 HRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
H N+++L T + LV+ ++ + S+L + P K +GL+
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 415 YLHEHCDPKIIHRDVKAANILLDEDA 440
+ H H +++HRD+K N+L++ +
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEG 142
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 27/143 (18%)
Query: 307 LGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQ--FQTEVKIISMAVHRNLLRLYG 363
LG G FGKV G+ VA+K + ++ + ++Q + E+ + + H ++++LY
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR--------GLSY 415
+ E ++V Y N ++ R K++ AR + Y
Sbjct: 81 VIKSKDEIIMVIEYAGNELFDYIVQ-------------RDKMSEQEARRFFQQIISAVEY 127
Query: 416 LHEHCDPKIIHRDVKAANILLDE 438
H H KI+HRD+K N+LLDE
Sbjct: 128 CHRH---KIVHRDLKPENLLLDE 147
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 307 LGRGGFGKVYKGRLADGKL----VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
LG G +G+V +LA ++ VAVK + +R + E+ I M H N+++ Y
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
G + L Y + G + R+ E +P P ++ G+ YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPE---PDAQRFFHQLMAGVVYLH---GI 124
Query: 423 KIIHRDVKAANILLDE 438
I HRD+K N+LLDE
Sbjct: 125 GITHRDIKPENLLLDE 140
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 307 LGRGGFGKVYKGRLADGKL----VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
LG G +G+V +LA ++ VAVK + +R + E+ I M H N+++ Y
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
G + L Y + G + R+ E +P P ++ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPE---PDAQRFFHQLMAGVVYLH---GI 123
Query: 423 KIIHRDVKAANILLDE 438
I HRD+K N+LLDE
Sbjct: 124 GITHRDIKPENLLLDE 139
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 8/146 (5%)
Query: 297 ATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAV 354
+ + F +G G +G VYK R G++VA+K+++ + T G E+ ++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 355 HRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
H N+++L T + LV+ ++ + S+L + P K +GL+
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLA 121
Query: 415 YLHEHCDPKIIHRDVKAANILLDEDA 440
+ H H +++HRD+K N+L++ +
Sbjct: 122 FCHSH---RVLHRDLKPQNLLINTEG 144
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAVHR 356
+ F +G G +G VYK R G++VA+K+++ + T G E+ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 357 NLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYL 416
N+++L T + LV+ ++ + S+L + P K +GL++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 417 HEHCDPKIIHRDVKAANILLDEDA 440
H H +++HRD+K N+L++ +
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEG 139
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAVHR 356
+ F +G G +G VYK R G++VA+K+++ + T G E+ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 357 NLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYL 416
N+++L T + LV+ ++ + S+L + P K +GL++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 417 HEHCDPKIIHRDVKAANILLDEDA 440
H H +++HRD+K N+L++ +
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEG 140
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAVHR 356
+ F +G G +G VYK R G++VA+K+++ + T G E+ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 357 NLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYL 416
N+++L T + LV+ ++ + S+L + P K +GL++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 417 HEHCDPKIIHRDVKAANILLDEDA 440
H H +++HRD+K N+L++ +
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEG 139
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 8/146 (5%)
Query: 297 ATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAV 354
+ + F +G G +G VYK R G++VA+K+++ + T G E+ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 355 HRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
H N+++L T + LV+ ++ + S+L + P K +GL+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 415 YLHEHCDPKIIHRDVKAANILLDEDA 440
+ H H +++HRD+K N+L++ +
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEG 141
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 307 LGRGGFGKVYKGR---LAD--GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
LG+G FG V R L D G++VAVK+L + T F+ E++I+ H N+++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 362 YGFCTTVTEK--LLVYPYMTNGSVASRL---RERQSSLPPLDWPTRKKIALGSARGLSYL 416
G C + + L+ Y+ GS+ L +ER + L + ++ +G+ YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 130
Query: 417 HEHCDPKIIHRDVKAANILLDED 439
+ IHRD+ NIL++ +
Sbjct: 131 ---GTKRYIHRDLATRNILVENE 150
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 30/160 (18%)
Query: 307 LGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFC 365
+G G G V + + GKLVAVK++ + EL F EV I+ H N++ +Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 140
Query: 366 TTVTEKLLVYPYMTNGSVA-----SRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
E +V ++ G++ +R+ E Q + + L + LS LH
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA----------AVCLAVLQALSVLHAQG 190
Query: 421 DPKIIHRDVKAANILLDEDA----------DQSSKTILRR 450
+IHRD+K+ +ILL D Q SK + RR
Sbjct: 191 ---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 227
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAVHR 356
+ F +G G +G VYK R G++VA+K+++ + T G E+ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 357 NLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYL 416
N+++L T + LV+ ++ + S+L + P K +GL++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 417 HEHCDPKIIHRDVKAANILLDEDA 440
H H +++HRD+K N+L++ +
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEG 139
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 307 LGRGGFGKVYKGR---LAD--GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
LG+G FG V R L D G++VAVK+L+ T F+ E++I+ H N+++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 362 YGFCTTVTEK--LLVYPYMTNGSVASRL---RERQSSLPPLDWPTRKKIALGSARGLSYL 416
G C + + L+ Y+ GS+ L +ER + L + ++ +G+ YL
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 148
Query: 417 HEHCDPKIIHRDVKAANILLDED 439
+ IHRD+ NIL++ +
Sbjct: 149 ---GTKRYIHRDLATRNILVENE 168
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 8/146 (5%)
Query: 297 ATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAV 354
+ + F +G G +G VYK R G++VA+K+++ + T G E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 355 HRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
H N+++L T + LV+ ++ + S+L + P K +GL+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 415 YLHEHCDPKIIHRDVKAANILLDEDA 440
+ H H +++HRD+K N+L++ +
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEG 143
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Query: 307 LGRGGFGKVYKG---RLAD-GKL----VAVKRLKEERTSGGELQFQTEVKIISMAVHRNL 358
LG+G F K++KG + D G+L V +K L + + E F+ ++S H++L
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEA-ASMMSKLSHKHL 74
Query: 359 LRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE 418
+ YG C E +LV ++ GS+ + L++ ++ + L W + ++A A + +L E
Sbjct: 75 VLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINIL-W--KLEVAKQLAWAMHFLEE 131
Query: 419 HCDPKIIHRDVKAANILLDEDADQSS 444
+ +IH +V A NILL + D+ +
Sbjct: 132 NT---LIHGNVCAKNILLIREEDRKT 154
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 21/147 (14%)
Query: 300 GFSNKNILGRGGFGKVYKGRLADGKLVAVKR-LKEERTSGGELQFQTEVKIISMAVHRNL 358
++N ++G G FG V++ +L + VA+K+ L+++R ELQ I+ + H N+
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQ------IMRIVKHPNV 94
Query: 359 LRLYGFCTTVTEK--------LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSA 410
+ L F + +K +L Y T + + + ++P L K
Sbjct: 95 VDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPML---LIKLYMYQLL 151
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLD 437
R L+Y+H I HRD+K N+LLD
Sbjct: 152 RSLAYIHSI---GICHRDIKPQNLLLD 175
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 72/148 (48%), Gaps = 12/148 (8%)
Query: 297 ATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAV 354
+ + F +G G +G VYK R G++VA+K+++ + T G E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 355 HRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRE--RQSSLPPLDWPTRKKIALGSARG 412
H N+++L T + LV+ + V L++ S+L + P K +G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEH-----VDQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 413 LSYLHEHCDPKIIHRDVKAANILLDEDA 440
L++ H H +++HRD+K N+L++ +
Sbjct: 119 LAFCHSH---RVLHRDLKPQNLLINTEG 143
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 307 LGRGGFGKVYKGR---LAD--GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
LG+G FG V R L D G++VAVK+L+ T F+ E++I+ H N+++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 362 YGFCTTVTEK--LLVYPYMTNGSVASRL---RERQSSLPPLDWPTRKKIALGSARGLSYL 416
G C + + L+ Y+ GS+ L +ER + L + ++ +G+ YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 130
Query: 417 HEHCDPKIIHRDVKAANILLDED 439
+ IHRD+ NIL++ +
Sbjct: 131 ---GTKRYIHRDLATRNILVENE 150
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAVHR 356
+ F +G G +G VYK R G++VA+K+++ + T G E+ ++ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 357 NLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYL 416
N+++L T + LV+ ++ + S+L + P K +GL++
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 417 HEHCDPKIIHRDVKAANILLDEDA 440
H H +++HRD+K N+L++ +
Sbjct: 127 HSH---RVLHRDLKPQNLLINTEG 147
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAVHR 356
+ F +G G +G VYK R G++VA+K+++ + T G E+ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 357 NLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYL 416
N+++L T + LV+ ++ + S+L + P K +GL++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 417 HEHCDPKIIHRDVKAANILLDEDA 440
H H +++HRD+K N+L++ +
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEG 139
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAVHR 356
+ F +G G +G VYK R G++VA+K+++ + T G E+ ++ H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 357 NLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYL 416
N+++L T + LV+ ++ + S+L + P K +GL++
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 417 HEHCDPKIIHRDVKAANILLDEDA 440
H H +++HRD+K N+L++ +
Sbjct: 121 HSH---RVLHRDLKPQNLLINTEG 141
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAVHR 356
+ F +G G +G VYK R G++VA+K+++ + T G E+ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 357 NLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYL 416
N+++L T + LV+ ++ + S+L + P K +GL++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 417 HEHCDPKIIHRDVKAANILLDEDA 440
H H +++HRD+K N+L++ +
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEG 140
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 17/136 (12%)
Query: 305 NILGRGGFGKVY--KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
+LG G F +V+ K RL GKL A+K +K+ + + + E+ ++ H N++ L
Sbjct: 15 EVLGSGAFSEVFLVKQRLT-GKLFALKCIKK-SPAFRDSSLENEIAVLKKIKHENIVTLE 72
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS---YLHEH 419
+ T LV ++ G + R+ ER T K +L + LS YLHE+
Sbjct: 73 DIYESTTHYYLVMQLVSGGELFDRILERGVY-------TEKDASLVIQQVLSAVKYLHEN 125
Query: 420 CDPKIIHRDVKAANIL 435
I+HRD+K N+L
Sbjct: 126 ---GIVHRDLKPENLL 138
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 307 LGRGGFGKVYKGR---LAD--GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
LG+G FG V R L D G++VAVK+L+ T F+ E++I+ H N+++
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 362 YGFCTTVTEK--LLVYPYMTNGSVASRL---RERQSSLPPLDWPTRKKIALGSARGLSYL 416
G C + + L+ Y+ GS+ L +ER + L + ++ +G+ YL
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 135
Query: 417 HEHCDPKIIHRDVKAANILLDED 439
+ IHRD+ NIL++ +
Sbjct: 136 ---GTKRYIHRDLATRNILVENE 155
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 307 LGRGGFGKVYKGRLADGKL----VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
LG G +G+V +LA ++ VAVK + +R + E+ I M H N+++ Y
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
G + L Y + G + R+ E +P P ++ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPE---PDAQRFFHQLMAGVVYLH---GI 123
Query: 423 KIIHRDVKAANILLDE 438
I HRD+K N+LLDE
Sbjct: 124 GITHRDIKPENLLLDE 139
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 307 LGRGGFGKVYKGRLADGKL----VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
LG G +G+V +LA ++ VAVK + +R + E+ I M H N+++ Y
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
G + L Y + G + R+ E +P P ++ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPE---PDAQRFFHQLMAGVVYLH---GI 123
Query: 423 KIIHRDVKAANILLDE 438
I HRD+K N+LLDE
Sbjct: 124 GITHRDIKPENLLLDE 139
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 307 LGRGGFGKVYKGR---LAD--GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
LG+G FG V R L D G++VAVK+L + T F+ E++I+ H N+++
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 362 YGFCTTVTEK--LLVYPYMTNGSVASRL---RERQSSLPPLDWPTRKKIALGSARGLSYL 416
G C + + L+ Y+ GS+ L +ER + L + ++ +G+ YL
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 128
Query: 417 HEHCDPKIIHRDVKAANILLDED 439
+ IHRD+ NIL++ +
Sbjct: 129 ---GTKRYIHRDLATRNILVENE 148
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Query: 301 FSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLL 359
+ K LG GGFG V + D G+ VA+K+ ++E + ++ E++I+ H N++
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 360 RLYGFCTTVTE------KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGL 413
+ + LL Y G + L + ++ + P R ++ S+ L
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS-AL 135
Query: 414 SYLHEHCDPKIIHRDVKAANILL 436
YLHE+ +IIHRD+K NI+L
Sbjct: 136 RYLHEN---RIIHRDLKPENIVL 155
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Query: 301 FSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLL 359
+ K LG GGFG V + D G+ VA+K+ ++E + ++ E++I+ H N++
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 360 RLYGFCTTVTE------KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGL 413
+ + LL Y G + L + ++ + P R ++ S+ L
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS-AL 134
Query: 414 SYLHEHCDPKIIHRDVKAANILL 436
YLHE+ +IIHRD+K NI+L
Sbjct: 135 RYLHEN---RIIHRDLKPENIVL 154
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 307 LGRGGFGKVYKGR---LAD--GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
LG+G FG V R L D G++VAVK+L+ T F+ E++I+ H N+++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 362 YGFCTTVTEK--LLVYPYMTNGSVASRL---RERQSSLPPLDWPTRKKIALGSARGLSYL 416
G C + + L+ Y+ GS+ L +ER + L + ++ +G+ YL
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 148
Query: 417 HEHCDPKIIHRDVKAANILLDED 439
+ IHRD+ NIL++ +
Sbjct: 149 ---GTKRYIHRDLATRNILVENE 168
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA 353
Q + N +G G G+V+K R G ++AVK++ R SG + + + + + +
Sbjct: 21 QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQM---RRSGNKEENKRILMDLDVV 77
Query: 354 VHRN----LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS 409
+ + +++ +G T T+ + M G+ A +L++R P+ K+ +
Sbjct: 78 LKSHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQG--PIPERILGKMTVAI 133
Query: 410 ARGLSYLHEHCDPKIIHRDVKAANILLDE 438
+ L YL E +IHRDVK +NILLDE
Sbjct: 134 VKALYYLKEK--HGVIHRDVKPSNILLDE 160
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAVHR 356
+ F +G G +G VYK R G++VA+K+++ + T G E+ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 357 NLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYL 416
N+++L T + LV+ ++ + S+L + P K +GL++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQDL---KTFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 417 HEHCDPKIIHRDVKAANILLDEDA 440
H H +++HRD+K N+L++ +
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEG 139
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 307 LGRGGFGKVYKGR---LAD--GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
LG+G FG V R L D G++VAVK+L + T F+ E++I+ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 362 YGFCTTVTEK--LLVYPYMTNGSVASRL---RERQSSLPPLDWPTRKKIALGSARGLSYL 416
G C + + L+ Y+ GS+ L +ER + L + ++ +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 133
Query: 417 HEHCDPKIIHRDVKAANILLDED 439
+ IHRD+ NIL++ +
Sbjct: 134 ---GTKRYIHRDLATRNILVENE 153
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 307 LGRGGFGKVYKGR---LAD--GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
LG+G FG V R L D G++VAVK+L+ T F+ E++I+ H N+++
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 362 YGFCTTVTEK--LLVYPYMTNGSVASRL---RERQSSLPPLDWPTRKKIALGSARGLSYL 416
G C + + L+ Y+ GS+ L +ER + L + ++ +G+ YL
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 134
Query: 417 HEHCDPKIIHRDVKAANILLDED 439
+ IHRD+ NIL++ +
Sbjct: 135 ---GTKRYIHRDLATRNILVENE 154
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 307 LGRGGFGKVYKGR---LAD--GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
LG+G FG V R L D G++VAVK+L+ T F+ E++I+ H N+++
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 362 YGFCTTVTEK--LLVYPYMTNGSVASRL---RERQSSLPPLDWPTRKKIALGSARGLSYL 416
G C + + L+ Y+ GS+ L +ER + L + ++ +G+ YL
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 161
Query: 417 HEHCDPKIIHRDVKAANILLDED 439
+ IHRD+ NIL++ +
Sbjct: 162 ---GTKRYIHRDLATRNILVENE 181
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 307 LGRGGFGKVYKGR---LAD--GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
LG+G FG V R L D G++VAVK+L+ T F+ E++I+ H N+++
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 362 YGFCTTVTEK--LLVYPYMTNGSVASRL---RERQSSLPPLDWPTRKKIALGSARGLSYL 416
G C + + L+ Y+ GS+ L +ER + L + ++ +G+ YL
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 136
Query: 417 HEHCDPKIIHRDVKAANILLDED 439
+ IHRD+ NIL++ +
Sbjct: 137 ---GTKRYIHRDLATRNILVENE 156
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 307 LGRGGFGKVYKGRLADGKL----VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
LG G +G+V +LA ++ VAVK + +R + E+ I M H N+++ Y
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
G + L Y + G + R+ E +P P ++ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPE---PDAQRFFHQLMAGVVYLH---GI 123
Query: 423 KIIHRDVKAANILLDE 438
I HRD+K N+LLDE
Sbjct: 124 GITHRDIKPENLLLDE 139
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 307 LGRGGFGKVYKGR---LAD--GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
LG+G FG V R L D G++VAVK+L+ T F+ E++I+ H N+++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 362 YGFCTTVTEK--LLVYPYMTNGSVASRL---RERQSSLPPLDWPTRKKIALGSARGLSYL 416
G C + + L+ Y+ GS+ L +ER + L + ++ +G+ YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 130
Query: 417 HEHCDPKIIHRDVKAANILLDED 439
+ IHRD+ NIL++ +
Sbjct: 131 ---GTKRYIHRDLATRNILVENE 150
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 307 LGRGGFGKVYKGR---LAD--GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
LG+G FG V R L D G++VAVK+L+ T F+ E++I+ H N+++
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 362 YGFCTTVTEK--LLVYPYMTNGSVASRL---RERQSSLPPLDWPTRKKIALGSARGLSYL 416
G C + + L+ Y+ GS+ L +ER + L + ++ +G+ YL
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 129
Query: 417 HEHCDPKIIHRDVKAANILLDED 439
+ IHRD+ NIL++ +
Sbjct: 130 ---GTKRYIHRDLATRNILVENE 149
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 70/144 (48%), Gaps = 8/144 (5%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAVHR 356
+ F +G G +G VYK R G++VA+K+++ + T G E+ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 357 NLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYL 416
N+++L T + LV+ ++ + + S+L + P K +GL++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD--LKKFMD-ASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 417 HEHCDPKIIHRDVKAANILLDEDA 440
H H +++HRD+K N+L++ +
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEG 140
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 307 LGRGGFGKVYKGR---LAD--GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
LG+G FG V R L D G++VAVK+L+ T F+ E++I+ H N+++
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 362 YGFCTTVTEK--LLVYPYMTNGSVASRL---RERQSSLPPLDWPTRKKIALGSARGLSYL 416
G C + + L+ Y+ GS+ L +ER + L + ++ +G+ YL
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 137
Query: 417 HEHCDPKIIHRDVKAANILLDED 439
+ IHRD+ NIL++ +
Sbjct: 138 ---GTKRYIHRDLATRNILVENE 157
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 69/156 (44%), Gaps = 29/156 (18%)
Query: 307 LGRGGFGKVYKGRL-----ADGKL-VAVKRLKEERTSGGELQFQTEVKIIS-MAVHRNLL 359
LG G FGKV + D L VAVK LK + + +E+KI+S + H N++
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQS-----SLPP------LDWPTRKKIALG 408
L G CT L++ Y G + + LR + SL P LD + + L
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 409 S--------ARGLSYLHEHCDPKIIHRDVKAANILL 436
A+G+++L IHRDV A N+LL
Sbjct: 159 DLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLL 191
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 307 LGRGGFGKVYKGRLADGKL----VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
LG G +G+V +LA ++ VAVK + +R + E+ I M H N+++ Y
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
G + L Y + G + R+ E +P P ++ G+ YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPE---PDAQRFFHQLMAGVVYLH---GI 124
Query: 423 KIIHRDVKAANILLDE 438
I HRD+K N+LLDE
Sbjct: 125 GITHRDIKPENLLLDE 140
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 23/146 (15%)
Query: 307 LGRGGFGKV--YKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGF 364
LG GGF V +G L DG A+KR+ E + Q E + + H N+LRL +
Sbjct: 37 LGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDRE-EAQREADMHRLFNHPNILRLVAY 94
Query: 365 C----TTVTEKLLVYPYMTNGSVAS---RLRERQSSLPPLDWPTRKKIA---LGSARGLS 414
C E L+ P+ G++ + RL+++ + L T +I LG RGL
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFL------TEDQILWLLLGICRGLE 148
Query: 415 YLHEHCDPKIIHRDVKAANILLDEDA 440
+H HRD+K NILL ++
Sbjct: 149 AIHA---KGYAHRDLKPTNILLGDEG 171
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 22/142 (15%)
Query: 305 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGEL--QFQTEVKIISMAVHRNLLRL 361
+ LG G FGKV G G VAVK L ++ ++ + + E++ + + H ++++L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 362 YGFCTTVTEKLLVYPYMTNGSV------ASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415
Y +T T+ +V Y++ G + R+ E ++ +++ + Y
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEA----------RRLFQQILSAVDY 126
Query: 416 LHEHCDPKIIHRDVKAANILLD 437
H H ++HRD+K N+LLD
Sbjct: 127 CHRHM---VVHRDLKPENVLLD 145
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 16/144 (11%)
Query: 304 KNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
+ +L GGF VY+ + + G+ A+KRL Q + ++ H N+++
Sbjct: 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ-- 90
Query: 363 GFCTTVT----------EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARG 412
FC+ + + L+ + G + L++ +S PL T KI + R
Sbjct: 91 -FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESR-GPLSCDTVLKIFYQTCRA 148
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
+ ++H P IIHRD+K N+LL
Sbjct: 149 VQHMHRQ-KPPIIHRDLKVENLLL 171
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 22/142 (15%)
Query: 305 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGEL--QFQTEVKIISMAVHRNLLRL 361
+ LG G FGKV G G VAVK L ++ ++ + + E++ + + H ++++L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 362 YGFCTTVTEKLLVYPYMTNGSV------ASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415
Y +T T+ +V Y++ G + R+ E ++ +++ + Y
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEA----------RRLFQQILSAVDY 126
Query: 416 LHEHCDPKIIHRDVKAANILLD 437
H H ++HRD+K N+LLD
Sbjct: 127 CHRHM---VVHRDLKPENVLLD 145
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 19/123 (15%)
Query: 323 GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGS 382
GK VAVK++ + EL F EV I+ H N++ +Y E +V ++ G+
Sbjct: 70 GKQVAVKKMDLRKQQRRELLF-NEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGA 128
Query: 383 VA-----SRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD 437
+ +R+ E Q + + L R LSYLH +IHRD+K+ +ILL
Sbjct: 129 LTDIVTHTRMNEEQIA----------TVCLSVLRALSYLHNQ---GVIHRDIKSDSILLT 175
Query: 438 EDA 440
D
Sbjct: 176 SDG 178
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAVHR 356
+ F +G G +G VYK R G++VA+K+++ + T G E+ ++ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 357 NLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYL 416
N+++L T + LV+ ++ + S+L + P K +GL++
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 417 HEHCDPKIIHRDVKAANILLDEDA 440
H H +++HRD+K N+L++ +
Sbjct: 127 HSH---RVLHRDLKPQNLLINTEG 147
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 29/171 (16%)
Query: 283 LGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGK----LVAVKRLKEERTSG 338
LG ++ ++ + D + +++LG G F +V LA+ K LVA+K + +E G
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVI---LAEDKRTQKLVAIKCIAKEALEG 58
Query: 339 GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRL------RERQS 392
E + E+ ++ H N++ L + L+ ++ G + R+ ER +
Sbjct: 59 KEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA 118
Query: 393 SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANIL---LDEDA 440
S ++ + YLH D I+HRD+K N+L LDED+
Sbjct: 119 S----------RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDS 156
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 30/160 (18%)
Query: 307 LGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFC 365
+G G G V + + GKLVAVK++ + EL F EV I+ H N++ +Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 217
Query: 366 TTVTEKLLVYPYMTNGSVA-----SRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
E +V ++ G++ +R+ E Q + + L + LS LH
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA----------AVCLAVLQALSVLHAQG 267
Query: 421 DPKIIHRDVKAANILLDEDA----------DQSSKTILRR 450
+IHRD+K+ +ILL D Q SK + RR
Sbjct: 268 ---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 304
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 29/171 (16%)
Query: 283 LGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGK----LVAVKRLKEERTSG 338
LG ++ ++ + D + +++LG G F +V LA+ K LVA+K + +E G
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVI---LAEDKRTQKLVAIKCIAKEALEG 58
Query: 339 GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRL------RERQS 392
E + E+ ++ H N++ L + L+ ++ G + R+ ER +
Sbjct: 59 KEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA 118
Query: 393 SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANIL---LDEDA 440
S ++ + YLH D I+HRD+K N+L LDED+
Sbjct: 119 S----------RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDS 156
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 307 LGRGGFGKVYKGRLADGKL----VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
LG G +G+V +LA ++ VAVK + +R + E+ I M H N+++ Y
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
G + L Y + G + R+ E +P P ++ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPE---PDAQRFFHQLMAGVVYLH---GI 123
Query: 423 KIIHRDVKAANILLDE 438
I HRD+K N+LLDE
Sbjct: 124 GITHRDIKPENLLLDE 139
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 307 LGRGGFGKVYKGR---LAD--GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
LG+G FG V R L D G++VAVK+L+ T F+ E++I+ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 362 YGFCTTVTEK--LLVYPYMTNGSVASRLR---ERQSSLPPLDWPTRKKIALGSARGLSYL 416
G C + + L+ Y+ GS+ L+ ER + L + ++ +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQ------ICKGMEYL 133
Query: 417 HEHCDPKIIHRDVKAANILLDED 439
+ IHRD+ NIL++ +
Sbjct: 134 ---GTKRYIHRDLATRNILVENE 153
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Query: 293 ELQVATDGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQT--EVKI 349
++++ + F +LG+G FGKV+ + A+K LK++ + T E ++
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 350 ISMAVHRNLLRLYGFCTTVTEK--LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIAL 407
+S+A L + FCT T++ V Y+ G + ++ S D A
Sbjct: 72 LSLAWEHPFLT-HMFCTFQTKENLFFVMEYLNGGDLMYHIQ----SCHKFDLSRATFYAA 126
Query: 408 GSARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440
GL +LH I++RD+K NILLD+D
Sbjct: 127 EIILGLQFLHSKG---IVYRDLKLDNILLDKDG 156
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 29/171 (16%)
Query: 283 LGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGK----LVAVKRLKEERTSG 338
LG ++ ++ + D + +++LG G F +V LA+ K LVA+K + +E G
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVI---LAEDKRTQKLVAIKCIAKEALEG 58
Query: 339 GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRL------RERQS 392
E + E+ ++ H N++ L + L+ ++ G + R+ ER +
Sbjct: 59 KEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA 118
Query: 393 SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANIL---LDEDA 440
S ++ + YLH D I+HRD+K N+L LDED+
Sbjct: 119 S----------RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDS 156
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 307 LGRGGFGKVYKGRLADGKL----VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
LG G +G+V +LA ++ VAVK + +R + E+ I M H N+++ Y
Sbjct: 13 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 69
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
G + L Y + G + R+ E +P P ++ G+ YLH
Sbjct: 70 GHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPE---PDAQRFFHQLMAGVVYLH---GI 122
Query: 423 KIIHRDVKAANILLDE 438
I HRD+K N+LLDE
Sbjct: 123 GITHRDIKPENLLLDE 138
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 307 LGRGGFGKVYKGRLADGKL----VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
LG G +G+V +LA ++ VAVK + +R + E+ I M H N+++ Y
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
G + L Y + G + R+ E +P P ++ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPE---PDAQRFFHQLMAGVVYLH---GI 123
Query: 423 KIIHRDVKAANILLDE 438
I HRD+K N+LLDE
Sbjct: 124 GITHRDIKPENLLLDE 139
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 307 LGRGGFGKVYKGRLADGKL----VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
LG G +G+V +LA ++ VAVK + +R + E+ I M H N+++ Y
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
G + L Y + G + R+ E +P P ++ G+ YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPE---PDAQRFFHQLMAGVVYLH---GI 124
Query: 423 KIIHRDVKAANILLDE 438
I HRD+K N+LLDE
Sbjct: 125 GITHRDIKPENLLLDE 140
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 307 LGRGGFGKVYKGRLADGKL----VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
LG G +G+V +LA ++ VAVK + +R + E+ I M H N+++ Y
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
G + L Y + G + R+ E +P P ++ G+ YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPE---PDAQRFFHQLMAGVVYLH---GI 124
Query: 423 KIIHRDVKAANILLDE 438
I HRD+K N+LLDE
Sbjct: 125 GITHRDIKPENLLLDE 140
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 307 LGRGGFGKVYKGRLADGKL----VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
LG G +G+V +LA ++ VAVK + +R + E+ I M H N+++ Y
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
G + L Y + G + R+ E +P P ++ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPE---PDAQRFFHQLMAGVVYLH---GI 123
Query: 423 KIIHRDVKAANILLDE 438
I HRD+K N+LLDE
Sbjct: 124 GITHRDIKPENLLLDE 139
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 307 LGRGGFGKVYKGRLADGKL----VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
LG G +G+V +LA ++ VAVK + +R + E+ I M H N+++ Y
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
G + L Y + G + R+ E +P P ++ G+ YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPE---PDAQRFFHQLMAGVVYLH---GI 124
Query: 423 KIIHRDVKAANILLDE 438
I HRD+K N+LLDE
Sbjct: 125 GITHRDIKPENLLLDE 140
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 307 LGRGGFGKVYKGRLADGKL----VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
LG G +G+V +LA ++ VAVK + +R + E+ I M H N+++ Y
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
G + L Y + G + R+ E +P P ++ G+ YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPE---PDAQRFFHQLMAGVVYLH---GI 124
Query: 423 KIIHRDVKAANILLDE 438
I HRD+K N+LLDE
Sbjct: 125 GITHRDIKPENLLLDE 140
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 7/130 (5%)
Query: 313 GKVYKGRLADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT--VT 369
G+++KGR G + VK LK + ++ F E + + H N+L + G C +
Sbjct: 24 GELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 370 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDV 429
L+ +M GS+ + L E + + +D K AL ARG+++LH +P I +
Sbjct: 83 HPTLITHWMPYGSLYNVLHEGTNFV--VDQSQAVKFALDMARGMAFLHT-LEPLIPRHAL 139
Query: 430 KAANILLDED 439
+ ++++DED
Sbjct: 140 NSRSVMIDED 149
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 307 LGRGGFGKVYKGRLADGKL----VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
LG G +G+V +LA ++ VAVK + +R + E+ I M H N+++ Y
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
G + L Y + G + R+ E +P P ++ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPE---PDAQRFFHQLMAGVVYLH---GI 123
Query: 423 KIIHRDVKAANILLDE 438
I HRD+K N+LLDE
Sbjct: 124 GITHRDIKPENLLLDE 139
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 25/171 (14%)
Query: 298 TDGFSNKNILGRGGFGKVYK--GRLADGKLVAVKRLKEERTSGGELQFQTEVK-IISMAV 354
T F +G G FG V+K RL DG + A+KR K + G + Q ++ + + AV
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSK--KPLAGSVDEQNALREVYAHAV 64
Query: 355 ---HRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H +++R + L+ Y GS+A + E + K + L R
Sbjct: 65 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL-------------DEDADQSSKTILR 449
GL Y+H ++H D+K +NI + DED S+K + +
Sbjct: 125 GLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 172
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 25/171 (14%)
Query: 298 TDGFSNKNILGRGGFGKVYK--GRLADGKLVAVKRLKEERTSGGELQFQTEVK-IISMAV 354
T F +G G FG V+K RL DG + A+KR K + G + Q ++ + + AV
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSK--KPLAGSVDEQNALREVYAHAV 64
Query: 355 ---HRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H +++R + L+ Y GS+A + E + K + L R
Sbjct: 65 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL-------------DEDADQSSKTILR 449
GL Y+H ++H D+K +NI + DED S+K + +
Sbjct: 125 GLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 172
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 77/171 (45%), Gaps = 18/171 (10%)
Query: 276 EDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEE 334
E D + Q K L + + + FS I+GRGGFG+VY R AD GK+ A+K L ++
Sbjct: 167 ESDKFTRFCQWKNVELN-IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK 225
Query: 335 R--TSGGELQFQTEVKIISMAVHRN----LLRLYGFCTTVTEKL-LVYPYMTNGSVASRL 387
R GE E ++S+ + + Y F T +KL + M G + L
Sbjct: 226 RIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP--DKLSFILDLMNGGDLHYHL 283
Query: 388 RERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE 438
S + A GL ++H +++RD+K ANILLDE
Sbjct: 284 ----SQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDE 327
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 77/171 (45%), Gaps = 18/171 (10%)
Query: 276 EDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEE 334
E D + Q K L + + + FS I+GRGGFG+VY R AD GK+ A+K L ++
Sbjct: 167 ESDKFTRFCQWKNVELN-IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK 225
Query: 335 R--TSGGELQFQTEVKIISMAVHRN----LLRLYGFCTTVTEKL-LVYPYMTNGSVASRL 387
R GE E ++S+ + + Y F T +KL + M G + L
Sbjct: 226 RIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP--DKLSFILDLMNGGDLHYHL 283
Query: 388 RERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE 438
S + A GL ++H +++RD+K ANILLDE
Sbjct: 284 ----SQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDE 327
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 77/171 (45%), Gaps = 18/171 (10%)
Query: 276 EDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEE 334
E D + Q K L + + + FS I+GRGGFG+VY R AD GK+ A+K L ++
Sbjct: 166 ESDKFTRFCQWKNVELN-IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK 224
Query: 335 R--TSGGELQFQTEVKIISMAVHRN----LLRLYGFCTTVTEKL-LVYPYMTNGSVASRL 387
R GE E ++S+ + + Y F T +KL + M G + L
Sbjct: 225 RIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP--DKLSFILDLMNGGDLHYHL 282
Query: 388 RERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE 438
S + A GL ++H +++RD+K ANILLDE
Sbjct: 283 ----SQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDE 326
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 27/148 (18%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRL--KEERTSGGELQFQTEVKIISMAVHRNLLRLYGF 364
+G+G +G+V++G G+ VAVK ++E++ E TE+ M H N+L GF
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE----TELYNTVMLRHENIL---GF 96
Query: 365 CTT-------VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLH 417
+ T+ L+ Y GS+ L+ L LD + +I L A GL++LH
Sbjct: 97 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLH 151
Query: 418 -----EHCDPKIIHRDVKAANILLDEDA 440
P I HRD+K+ NIL+ ++
Sbjct: 152 IEIFGTQGKPAIAHRDLKSKNILVKKNG 179
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 27/148 (18%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRL--KEERTSGGELQFQTEVKIISMAVHRNLLRLYGF 364
+G+G +G+V++G G+ VAVK ++E++ E TE+ M H N+L GF
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE----TELYNTVMLRHENIL---GF 67
Query: 365 CTT-------VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLH 417
+ T+ L+ Y GS+ L+ L LD + +I L A GL++LH
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLH 122
Query: 418 -----EHCDPKIIHRDVKAANILLDEDA 440
P I HRD+K+ NIL+ ++
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNG 150
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 77/171 (45%), Gaps = 18/171 (10%)
Query: 276 EDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEE 334
E D + Q K L + + + FS I+GRGGFG+VY R AD GK+ A+K L ++
Sbjct: 167 ESDKFTRFCQWKNVELN-IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK 225
Query: 335 R--TSGGELQFQTEVKIISMAVHRN----LLRLYGFCTTVTEKL-LVYPYMTNGSVASRL 387
R GE E ++S+ + + Y F T +KL + M G + L
Sbjct: 226 RIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP--DKLSFILDLMNGGDLHYHL 283
Query: 388 RERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE 438
S + A GL ++H +++RD+K ANILLDE
Sbjct: 284 ----SQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDE 327
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 25/171 (14%)
Query: 298 TDGFSNKNILGRGGFGKVYK--GRLADGKLVAVKRLKEERTSGGELQFQTEVK-IISMAV 354
T F +G G FG V+K RL DG + A+KR K + G + Q ++ + + AV
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSK--KPLAGSVDEQNALREVYAHAV 62
Query: 355 ---HRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H +++R + L+ Y GS+A + E + K + L R
Sbjct: 63 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 122
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL-------------DEDADQSSKTILR 449
GL Y+H ++H D+K +NI + DED S+K + +
Sbjct: 123 GLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 170
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 27/144 (18%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV--HRNLLRLYGF 364
+G+G +G+V++G L G+ VAVK +S E + E +I + + H N+L GF
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIF----SSRDEQSWFRETEIYNTVLLRHDNIL---GF 67
Query: 365 CTT-------VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLH 417
+ T+ L+ Y +GS+ L +RQ+ P L ++A+ +A GL++LH
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFL-QRQTLEPHL----ALRLAVSAACGLAHLH 122
Query: 418 -----EHCDPKIIHRDVKAANILL 436
P I HRD K+ N+L+
Sbjct: 123 VEIFGTQGKPAIAHRDFKSRNVLV 146
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 27/148 (18%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRL--KEERTSGGELQFQTEVKIISMAVHRNLLRLYGF 364
+G+G +G+V++G G+ VAVK ++E++ E TE+ M H N+L GF
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE----TELYNTVMLRHENIL---GF 67
Query: 365 CTT-------VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLH 417
+ T+ L+ Y GS+ L+ L LD + +I L A GL++LH
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLH 122
Query: 418 -----EHCDPKIIHRDVKAANILLDEDA 440
P I HRD+K+ NIL+ ++
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNG 150
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 25/171 (14%)
Query: 298 TDGFSNKNILGRGGFGKVYK--GRLADGKLVAVKRLKEERTSGGELQFQTEVK-IISMAV 354
T F +G G FG V+K RL DG + A+KR K + G + Q ++ + + AV
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSK--KPLAGSVDEQNALREVYAHAV 66
Query: 355 ---HRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
H +++R + L+ Y GS+A + E + K + L R
Sbjct: 67 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 126
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL-------------DEDADQSSKTILR 449
GL Y+H ++H D+K +NI + DED S+K + +
Sbjct: 127 GLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 174
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Query: 293 ELQVATDGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQT--EVKI 349
++++ + F +LG+G FGKV+ + A+K LK++ + T E ++
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 350 ISMAVHRNLLRLYGFCTTVTEK--LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIAL 407
+S+A L + FCT T++ V Y+ G + ++ S D A
Sbjct: 71 LSLAWEHPFLT-HMFCTFQTKENLFFVMEYLNGGDLMYHIQ----SCHKFDLSRATFYAA 125
Query: 408 GSARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440
GL +LH I++RD+K NILLD+D
Sbjct: 126 EIILGLQFLHSK---GIVYRDLKLDNILLDKDG 155
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 17/142 (11%)
Query: 306 ILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGEL--QFQTEVKIISMAV-HRNLLRL 361
++GRG + KV RL ++ A+K +K+E + E QTE + A H L+ L
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 71
Query: 362 YGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR---GLSYLHE 418
+ T + V Y+ G + + +RQ LP + SA L+YLHE
Sbjct: 72 HSCFQTESRLFFVIEYVNGGDLMFHM-QRQRKLP------EEHARFYSAEISLALNYLHE 124
Query: 419 HCDPKIIHRDVKAANILLDEDA 440
II+RD+K N+LLD +
Sbjct: 125 RG---IIYRDLKLDNVLLDSEG 143
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 17/142 (11%)
Query: 306 ILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGEL--QFQTEVKIISMAV-HRNLLRL 361
++GRG + KV RL ++ A+K +K+E + E QTE + A H L+ L
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 75
Query: 362 YGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR---GLSYLHE 418
+ T + V Y+ G + + +RQ LP + SA L+YLHE
Sbjct: 76 HSCFQTESRLFFVIEYVNGGDLMFHM-QRQRKLP------EEHARFYSAEISLALNYLHE 128
Query: 419 HCDPKIIHRDVKAANILLDEDA 440
II+RD+K N+LLD +
Sbjct: 129 RG---IIYRDLKLDNVLLDSEG 147
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 307 LGRGGFGKVYKGR---LAD--GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
LG+G FG V R L D G++VAVK+L+ T F+ E++I+ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 362 YGFCTTVTEK--LLVYPYMTNGSVASRL---RERQSSLPPLDWPTRKKIALGSARGLSYL 416
G C + + L+ ++ GS+ L +ER + L + ++ +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 133
Query: 417 HEHCDPKIIHRDVKAANILLDED 439
+ IHRD+ NIL++ +
Sbjct: 134 ---GTKRYIHRDLATRNILVENE 153
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 73/150 (48%), Gaps = 20/150 (13%)
Query: 296 VATDGFSNKNILGRGGFGKVY------KGRLADGKLVAVKRLKEERTSGGELQFQTEVKI 349
+ +D + + +LG+G FG+V G+ K+++ +++K++ L+ EV++
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR---EVQL 79
Query: 350 ISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRL--RERQSSLPPLDWPTRKKIAL 407
+ H N+ +LY F LV T G + + R+R S + +I
Sbjct: 80 LKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA------RIIR 133
Query: 408 GSARGLSYLHEHCDPKIIHRDVKAANILLD 437
G++Y H++ KI+HRD+K N+LL+
Sbjct: 134 QVLSGITYXHKN---KIVHRDLKPENLLLE 160
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 29/162 (17%)
Query: 294 LQVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLK--EERTSGGELQFQTEVKII 350
L+ A+D F +LG+G FG+V K R A D + A+K+++ EE+ S +EV ++
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS----TILSEVMLL 56
Query: 351 SMAVHRNLLRLYGFC----------TTVTEKLLVY---PYMTNGSVASRLR-ERQSSLPP 396
+ H+ ++R Y T V +K ++ Y N ++ + E +
Sbjct: 57 ASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRD 116
Query: 397 LDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE 438
W ++I LSY+H IIHRD+K NI +DE
Sbjct: 117 EYWRLFRQIL----EALSYIHSQG---IIHRDLKPMNIFIDE 151
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAVHR 356
+ F +G G +G VYK R G++VA+ +++ + T G E+ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 357 NLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYL 416
N+++L T + LV+ ++ + S+L + P K +GL++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 417 HEHCDPKIIHRDVKAANILLDEDA 440
H H +++HRD+K N+L++ +
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEG 140
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAVHR 356
+ F +G G +G VYK R G++VA+ +++ + T G E+ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 357 NLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYL 416
N+++L T + LV+ ++ + S+L + P K +GL++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 417 HEHCDPKIIHRDVKAANILLDEDA 440
H H +++HRD+K N+L++ +
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEG 139
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 17/142 (11%)
Query: 306 ILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGEL--QFQTEVKIISMAV-HRNLLRL 361
++GRG + KV RL ++ A+K +K+E + E QTE + A H L+ L
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 86
Query: 362 YGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR---GLSYLHE 418
+ T + V Y+ G + + +RQ LP + SA L+YLHE
Sbjct: 87 HSCFQTESRLFFVIEYVNGGDLMFHM-QRQRKLP------EEHARFYSAEISLALNYLHE 139
Query: 419 HCDPKIIHRDVKAANILLDEDA 440
II+RD+K N+LLD +
Sbjct: 140 RG---IIYRDLKLDNVLLDSEG 158
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 26/147 (17%)
Query: 307 LGRGGFGKVYKGR---LAD--GKLVAVKRLKEERTSGGELQ--FQTEVKIISMAVHRNLL 359
LG+G FG V R L D G LVAVK+L+ SG + Q FQ E++I+ A+H + +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQH---SGPDQQRDFQREIQILK-ALHSDFI 70
Query: 360 RLY---GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSA---RGL 413
Y + E LV Y+ +G + L+ ++ L ++ L S+ +G+
Sbjct: 71 VKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARL------DASRLLLYSSQICKGM 124
Query: 414 SYLHEHCDPKIIHRDVKAANILLDEDA 440
YL + +HRD+ A NIL++ +A
Sbjct: 125 EYLGSR---RCVHRDLAARNILVESEA 148
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 307 LGRGGFGKVYKGR---LAD--GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361
LG+G FG V R L D G++VAVK+L+ T F+ E++I+ H N+++
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 362 YGFCTTVTEK--LLVYPYMTNGSVASRL---RERQSSLPPLDWPTRKKIALGSARGLSYL 416
G C + + L+ Y+ GS+ L +ER + L + ++ +G+ YL
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 131
Query: 417 HEHCDPKIIHRDVKAANILLDED 439
+ IHR++ NIL++ +
Sbjct: 132 ---GTKRYIHRNLATRNILVENE 151
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 64/145 (44%), Gaps = 12/145 (8%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERT-SGGELQFQT-EVKIISMAVH 355
+ F ILG G F V R LA + A+K L++ ++ + T E ++S H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 356 RNLLRLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
++LY FC EKL Y NG + +R+ S D + L
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 151
Query: 415 YLHEHCDPKIIHRDVKAANILLDED 439
YLH IIHRD+K NILL+ED
Sbjct: 152 YLH---GKGIIHRDLKPENILLNED 173
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 12/148 (8%)
Query: 294 LQVATDGFSNKNILGRGGFGKVY--KGRLADGKLVAVKRLKEER--TSGGELQFQTEVKI 349
Q +D + LG G +G+V K +L G A+K +K+ T+ EV +
Sbjct: 16 FQGLSDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAV 74
Query: 350 ISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS 409
+ H N+++LY F LV G + + RQ +D K L
Sbjct: 75 LKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-FSEVDAAVIMKQVLS- 132
Query: 410 ARGLSYLHEHCDPKIIHRDVKAANILLD 437
G +YLH+H I+HRD+K N+LL+
Sbjct: 133 --GTTYLHKH---NIVHRDLKPENLLLE 155
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 307 LGRGGFGKVYKG------RLADGKLVAVKRLKEERTSGGELQFQTEVKI-ISMAVHRNLL 359
LGRG FG+V + + A + VAVK LKE T +E+KI I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 360 RLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPP 396
L G CT L+V + G++++ LR +++ P
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 307 LGRGGFGKVYKG------RLADGKLVAVKRLKEERTSGGELQFQTEVKI-ISMAVHRNLL 359
LGRG FG+V + + A + VAVK LKE T +E+KI I + H N++
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 360 RLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPP 396
L G CT L+V + G++++ LR +++ P
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 125
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 12/144 (8%)
Query: 298 TDGFSNKNILGRGGFGKVY--KGRLADGKLVAVKRLKEER--TSGGELQFQTEVKIISMA 353
+D + LG G +G+V K +L G A+K +K+ T+ EV ++
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 354 VHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGL 413
H N+++LY F LV G + + RQ +D K L G
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-FSEVDAAVIMKQVLS---GT 117
Query: 414 SYLHEHCDPKIIHRDVKAANILLD 437
+YLH+H I+HRD+K N+LL+
Sbjct: 118 TYLHKH---NIVHRDLKPENLLLE 138
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 15/140 (10%)
Query: 307 LGRGGFGK-VYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLYGF 364
+G G FGK + DG+ +K + R S E + + EV +++ H N+++
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 365 CTTVTEKLLVYPYMTNGSVASRLRERQSSL----PPLDWPTRKKIALGSARGLSYLHEHC 420
+V Y G + R+ ++ L LDW + +AL H H
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK--------HVH- 142
Query: 421 DPKIIHRDVKAANILLDEDA 440
D KI+HRD+K+ NI L +D
Sbjct: 143 DRKILHRDIKSQNIFLTKDG 162
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 307 LGRGGFGKVYKG------RLADGKLVAVKRLKEERTSGGELQFQTEVKI-ISMAVHRNLL 359
LGRG FG+V + + A + VAVK LKE T +E+KI I + H N++
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 360 RLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPP 396
L G CT L+V + G++++ LR +++ P
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 127
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 307 LGRGGFGKVYKG------RLADGKLVAVKRLKEERTSGGELQFQTEVKI-ISMAVHRNLL 359
LGRG FG+V + + A + VAVK LKE T +E+KI I + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 360 RLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPP 396
L G CT L+V + G++++ LR +++ P
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 134
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Query: 307 LGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQ-TEVKIISMAVHRNLLRLYGF 364
+G G +G V+K R D G++VA+K+ E + E++++ H NL+ L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 365 CTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI 424
LV+ Y + +V L Q +P K I + + +++ H+H
Sbjct: 71 FRRKRRLHLVFEY-CDHTVLHELDRYQRGVPEH---LVKSITWQTLQAVNFCHKH---NC 123
Query: 425 IHRDVKAANILL 436
IHRDVK NIL+
Sbjct: 124 IHRDVKPENILI 135
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 307 LGRGGFGKVYKGRLADGKL----VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
LG G G+V +LA ++ VAVK + +R + E+ I M H N+++ Y
Sbjct: 14 LGEGAAGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
G + L Y + G + R+ E +P P ++ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPE---PDAQRFFHQLMAGVVYLH---GI 123
Query: 423 KIIHRDVKAANILLDE 438
I HRD+K N+LLDE
Sbjct: 124 GITHRDIKPENLLLDE 139
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 6/137 (4%)
Query: 307 LGRGGFGKVYK-GRLADGKLVAVKRLKEERTSGGELQF-QTEVKIISMAVHRNLLRLYG- 363
+G G +G+ K R +DGK++ K L + E Q +EV ++ H N++R Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 364 -FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCD- 421
T T +V Y G +AS + + LD ++ L H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 422 -PKIIHRDVKAANILLD 437
++HRD+K AN+ LD
Sbjct: 134 GHTVLHRDLKPANVFLD 150
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 6/137 (4%)
Query: 307 LGRGGFGKVYK-GRLADGKLVAVKRLKEERTSGGELQF-QTEVKIISMAVHRNLLRLYG- 363
+G G +G+ K R +DGK++ K L + E Q +EV ++ H N++R Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 364 -FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCD- 421
T T +V Y G +AS + + LD ++ L H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 422 -PKIIHRDVKAANILLD 437
++HRD+K AN+ LD
Sbjct: 134 GHTVLHRDLKPANVFLD 150
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 6/137 (4%)
Query: 307 LGRGGFGKVYK-GRLADGKLVAVKRLKEERTSGGELQF-QTEVKIISMAVHRNLLRLYG- 363
+G G +G+ K R +DGK++ K L + E Q +EV ++ H N++R Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 364 -FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCD- 421
T T +V Y G +AS + + LD ++ L H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 422 -PKIIHRDVKAANILLD 437
++HRD+K AN+ LD
Sbjct: 134 GHTVLHRDLKPANVFLD 150
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 22/140 (15%)
Query: 307 LGRGGFGKV-YKGRLADGKLVAVKRLKEERTSGGEL-QFQTEVKIISMAVHRNLLRLYGF 364
+G GGF KV + G++VA+K + ++ T G +L + +TE++ + H+++ +LY
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIK-IMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHV 76
Query: 365 CTTVTEKLLVYPYMTNGSV------ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE 418
T + +V Y G + RL E ++ + + ++Y+H
Sbjct: 77 LETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV----------VFRQIVSAVAYVHS 126
Query: 419 HCDPKIIHRDVKAANILLDE 438
HRD+K N+L DE
Sbjct: 127 Q---GYAHRDLKPENLLFDE 143
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 26/152 (17%)
Query: 307 LGRGGFGKVYKGRL-----ADGKL-VAVKRLKEERTSGGELQFQTEVKIIS-MAVHRNLL 359
LG G FGKV + +D + VAVK LK +E+K++S + H N++
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSL------PPL--------DWPTRKKI 405
L G CT L++ Y G + + LR ++ S P + D
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 406 ALGSARGLSYL-HEHCDPKIIHRDVKAANILL 436
+ A+G+++L ++C IHRD+ A NILL
Sbjct: 167 SYQVAKGMAFLASKNC----IHRDLAARNILL 194
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 26/152 (17%)
Query: 307 LGRGGFGKVYKGRL-----ADGKL-VAVKRLKEERTSGGELQFQTEVKIIS-MAVHRNLL 359
LG G FGKV + +D + VAVK LK +E+K++S + H N++
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSL------PPL--------DWPTRKKI 405
L G CT L++ Y G + + LR ++ S P + D
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 406 ALGSARGLSYL-HEHCDPKIIHRDVKAANILL 436
+ A+G+++L ++C IHRD+ A NILL
Sbjct: 151 SYQVAKGMAFLASKNC----IHRDLAARNILL 178
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 17/142 (11%)
Query: 306 ILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGEL--QFQTEVKIISMAV-HRNLLRL 361
++GRG + KV RL ++ A++ +K+E + E QTE + A H L+ L
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 118
Query: 362 YGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR---GLSYLHE 418
+ T + V Y+ G + + +RQ LP + SA L+YLHE
Sbjct: 119 HSCFQTESRLFFVIEYVNGGDLMFHM-QRQRKLP------EEHARFYSAEISLALNYLHE 171
Query: 419 HCDPKIIHRDVKAANILLDEDA 440
II+RD+K N+LLD +
Sbjct: 172 R---GIIYRDLKLDNVLLDSEG 190
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 26/152 (17%)
Query: 307 LGRGGFGKVYKGRL-----ADGKL-VAVKRLKEERTSGGELQFQTEVKIIS-MAVHRNLL 359
LG G FGKV + +D + VAVK LK +E+K++S + H N++
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSL------PPL--------DWPTRKKI 405
L G CT L++ Y G + + LR ++ S P + D
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 406 ALGSARGLSYL-HEHCDPKIIHRDVKAANILL 436
+ A+G+++L ++C IHRD+ A NILL
Sbjct: 169 SYQVAKGMAFLASKNC----IHRDLAARNILL 196
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 301 FSNKNILGRGGFGKVY-KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLL 359
F K LG G F +V A GKL AVK + ++ G E + E+ ++ H N++
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH 419
L + LV ++ G + R+ E+ D T + L + + YLH
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEK-GFYTEKDASTLIRQVLDA---VYYLHRM 139
Query: 420 CDPKIIHRDVKAANILLDEDADQSSKTIL 448
I+HRD+K N+L D+ SK ++
Sbjct: 140 G---IVHRDLKPENLLY-YSQDEESKIMI 164
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 10/105 (9%)
Query: 342 QFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVAS------RLRERQSSLP 395
F+ E++II+ + L G T E ++Y YM N S+ L + +
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 396 PLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440
P+ K I SY+H + I HRDVK +NIL+D++
Sbjct: 149 PI--QVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNG 189
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 26/152 (17%)
Query: 307 LGRGGFGKVYKGRL-----ADGKL-VAVKRLKEERTSGGELQFQTEVKIIS-MAVHRNLL 359
LG G FGKV + +D + VAVK LK +E+K++S + H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSL------PPL--------DWPTRKKI 405
L G CT L++ Y G + + LR ++ S P + D
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 406 ALGSARGLSYL-HEHCDPKIIHRDVKAANILL 436
+ A+G+++L ++C IHRD+ A NILL
Sbjct: 174 SYQVAKGMAFLASKNC----IHRDLAARNILL 201
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 24/151 (15%)
Query: 307 LGRGGFGKVYKGRL-----ADGKL-VAVKRLKEERTSGGELQFQTEVKIIS-MAVHRNLL 359
LG G FGKV + +D + VAVK LK +E+K++S + H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSL------PPL--------DWPTRKKI 405
L G CT L++ Y G + + LR ++ S P + D
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 406 ALGSARGLSYLHEHCDPKIIHRDVKAANILL 436
+ A+G+++L IHRD+ A NILL
Sbjct: 174 SYQVAKGMAFL---ASKNCIHRDLAARNILL 201
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRL-----KEERTSGGELQFQTEVKIISMAVHRNLLRL 361
LG G +G+V L K+ V+R K ++ + EV ++ + H N+++L
Sbjct: 45 LGSGAYGEVL---LCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKL 101
Query: 362 YGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCD 421
Y F LV G + + R +D K L G++YLH+H
Sbjct: 102 YDFFEDKRNYYLVMECYKGGELFDEIIHRMK-FNEVDAAVIIKQVLS---GVTYLHKH-- 155
Query: 422 PKIIHRDVKAANILLD 437
I+HRD+K N+LL+
Sbjct: 156 -NIVHRDLKPENLLLE 170
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 7/145 (4%)
Query: 294 LQVATDGFSNKNILGRGGFGKVYK-GRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM 352
+++ D F + LG G G V+K G ++A K + E Q E++++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 353 AVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARG 412
++ YG + E + +M GS+ L+ + +P K+++ +G
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPE---QILGKVSIAVIKG 116
Query: 413 LSYLHEHCDPKIIHRDVKAANILLD 437
L+YL E KI+HRDVK +NIL++
Sbjct: 117 LTYLREKH--KIMHRDVKPSNILVN 139
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 7/145 (4%)
Query: 294 LQVATDGFSNKNILGRGGFGKVYK-GRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM 352
+++ D F + LG G G V+K G ++A K + E Q E++++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 353 AVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARG 412
++ YG + E + +M GS+ L+ + +P K+++ +G
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPE---QILGKVSIAVIKG 116
Query: 413 LSYLHEHCDPKIIHRDVKAANILLD 437
L+YL E KI+HRDVK +NIL++
Sbjct: 117 LTYLREKH--KIMHRDVKPSNILVN 139
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 44/154 (28%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHR---------- 356
LGRG FG+V+ R+++++T FQ VK + + V R
Sbjct: 82 LGRGSFGEVH-------------RMEDKQTG-----FQCAVKKVRLEVFRAEELMACAGL 123
Query: 357 ---NLLRLYGFCTTVTEKLLVYPYMT--NGSVASRLRERQSSLPPLDWPTRKKIALGSA- 410
++ LYG V E V +M G +L + Q LP R LG A
Sbjct: 124 TSPRIVPLYG---AVREGPWVNIFMELLEGGSLGQLVKEQGCLPE----DRALYYLGQAL 176
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDADQSS 444
GL YLH +I+H DVKA N+LL D ++
Sbjct: 177 EGLEYLHSR---RILHGDVKADNVLLSSDGSHAA 207
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 29/162 (17%)
Query: 294 LQVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLK--EERTSGGELQFQTEVKII 350
L+ A+D F +LG+G FG+V K R A D + A+K+++ EE+ S +EV ++
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS----TILSEVXLL 56
Query: 351 SMAVHRNLLRLYGFC----------TTVTEKLLVY---PYMTNGSVASRLR-ERQSSLPP 396
+ H+ ++R Y T V +K ++ Y N ++ + E +
Sbjct: 57 ASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRD 116
Query: 397 LDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE 438
W ++I LSY+H IIHR++K NI +DE
Sbjct: 117 EYWRLFRQIL----EALSYIHSQG---IIHRNLKPXNIFIDE 151
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 44/154 (28%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHR---------- 356
LGRG FG+V+ R+++++T FQ VK + + V R
Sbjct: 101 LGRGSFGEVH-------------RMEDKQTG-----FQCAVKKVRLEVFRAEELMACAGL 142
Query: 357 ---NLLRLYGFCTTVTEKLLVYPYMT--NGSVASRLRERQSSLPPLDWPTRKKIALGSA- 410
++ LYG V E V +M G +L + Q LP R LG A
Sbjct: 143 TSPRIVPLYG---AVREGPWVNIFMELLEGGSLGQLVKEQGCLPE----DRALYYLGQAL 195
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDADQSS 444
GL YLH +I+H DVKA N+LL D ++
Sbjct: 196 EGLEYLHSR---RILHGDVKADNVLLSSDGSHAA 226
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 7/145 (4%)
Query: 294 LQVATDGFSNKNILGRGGFGKVYK-GRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM 352
+++ D F + LG G G V+K G ++A K + E Q E++++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 353 AVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARG 412
++ YG + E + +M GS+ L+ + +P K+++ +G
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQ---ILGKVSIAVIKG 116
Query: 413 LSYLHEHCDPKIIHRDVKAANILLD 437
L+YL E KI+HRDVK +NIL++
Sbjct: 117 LTYLREKH--KIMHRDVKPSNILVN 139
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 63/151 (41%), Gaps = 4/151 (2%)
Query: 299 DGFSNKNILGRGGFGKVY-KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRN 357
D F K LG G FG V+ + G +K + ++R+ Q + E++++ H N
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 358 LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLH 417
+++++ +V G + R+ Q+ L ++ L+Y H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 418 EHCDPKIIHRDVKAANILLDEDADQSSKTIL 448
++H+D+K NIL + + S I+
Sbjct: 142 SQ---HVVHKDLKPENILFQDTSPHSPIKII 169
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 29/155 (18%)
Query: 299 DGFSNKNILGRGGFGKVYKGRLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAV 354
D + +++LG G F +V LA+ K LVA+K + ++ G E + E+ ++
Sbjct: 18 DIYDFRDVLGTGAFSEVI---LAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIK 74
Query: 355 HRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRL------RERQSSLPPLDWPTRKKIALG 408
H N++ L + L+ ++ G + R+ ER +S ++
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS----------RLIFQ 124
Query: 409 SARGLSYLHEHCDPKIIHRDVKAANIL---LDEDA 440
+ YLH D I+HRD+K N+L LDED+
Sbjct: 125 VLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDS 156
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 7/145 (4%)
Query: 294 LQVATDGFSNKNILGRGGFGKVYK-GRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM 352
+++ D F + LG G G V+K G ++A K + E Q E++++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 353 AVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARG 412
++ YG + E + +M GS+ L+ + +P K+++ +G
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQ---ILGKVSIAVIKG 116
Query: 413 LSYLHEHCDPKIIHRDVKAANILLD 437
L+YL E KI+HRDVK +NIL++
Sbjct: 117 LTYLREKH--KIMHRDVKPSNILVN 139
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 7/145 (4%)
Query: 294 LQVATDGFSNKNILGRGGFGKVYK-GRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM 352
+++ D F + LG G G V+K G ++A K + E Q E++++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 353 AVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARG 412
++ YG + E + +M GS+ L+ + +P K+++ +G
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQ---ILGKVSIAVIKG 116
Query: 413 LSYLHEHCDPKIIHRDVKAANILLD 437
L+YL E KI+HRDVK +NIL++
Sbjct: 117 LTYLREKH--KIMHRDVKPSNILVN 139
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 69/160 (43%), Gaps = 44/160 (27%)
Query: 301 FSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHR---- 356
+++ LGRG FG+V+ R+K+++T FQ VK + + V R
Sbjct: 74 MTHQPRLGRGSFGEVH-------------RMKDKQTG-----FQCAVKKVRLEVFRVEEL 115
Query: 357 ---------NLLRLYGFCTTVTEKLLVYPYMT--NGSVASRLRERQSSLPPLDWPTRKKI 405
++ LYG V E V +M G +L ++ LP R
Sbjct: 116 VACAGLSSPRIVPLYG---AVREGPWVNIFMELLEGGSLGQLIKQMGCLPE----DRALY 168
Query: 406 ALGSA-RGLSYLHEHCDPKIIHRDVKAANILLDEDADQSS 444
LG A GL YLH +I+H DVKA N+LL D +++
Sbjct: 169 YLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAA 205
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 30/169 (17%)
Query: 284 GQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQ 342
G+LK + + + +GRG +G V K G+++AVKR++ + Q
Sbjct: 7 GKLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQ 66
Query: 343 FQTEVKIISMAVH-RNLLRLYG-------------FCTTVTEKLLVYPYMTNGSVASRLR 388
++ ++ + +++ YG +T +K Y Y V
Sbjct: 67 LLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPE-- 124
Query: 389 ERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD 437
KI L + + L++L E+ KIIHRD+K +NILLD
Sbjct: 125 -----------EILGKITLATVKALNHLKENL--KIIHRDIKPSNILLD 160
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 26/147 (17%)
Query: 307 LGRGGFGKVYKGR---LAD--GKLVAVKRLKEERTSGGELQ--FQTEVKIISMAVHRNLL 359
LG+G FG V R L D G LVAVK+L+ SG + Q FQ E++I+ A+H + +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQH---SGPDQQRDFQREIQILK-ALHSDFI 74
Query: 360 RLY---GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSA---RGL 413
Y + LV Y+ +G + L+ ++ L ++ L S+ +G+
Sbjct: 75 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL------DASRLLLYSSQICKGM 128
Query: 414 SYLHEHCDPKIIHRDVKAANILLDEDA 440
YL + +HRD+ A NIL++ +A
Sbjct: 129 EYLGSR---RCVHRDLAARNILVESEA 152
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 307 LGRGGFGKVYKG------RLADGKLVAVKRLKEERTSGGELQFQTEVKIIS-MAVHRNLL 359
LGRG FGKV + + + VAVK LKE T+ TE+KI++ + H N++
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 360 RLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQ 391
L G CT L+V Y G++++ L+ ++
Sbjct: 95 NLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKR 127
Score = 28.9 bits (63), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Query: 410 ARGLSYLHEHCDPKIIHRDVKAANILLDED 439
ARG+ +L K IHRD+ A NILL E+
Sbjct: 209 ARGMEFLSSR---KCIHRDLAARNILLSEN 235
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 26/147 (17%)
Query: 307 LGRGGFGKVYKGR---LAD--GKLVAVKRLKEERTSGGELQ--FQTEVKIISMAVHRNLL 359
LG+G FG V R L D G LVAVK+L+ SG + Q FQ E++I+ A+H + +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQH---SGPDQQRDFQREIQILK-ALHSDFI 73
Query: 360 RLY---GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSA---RGL 413
Y + LV Y+ +G + L+ ++ L ++ L S+ +G+
Sbjct: 74 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL------DASRLLLYSSQICKGM 127
Query: 414 SYLHEHCDPKIIHRDVKAANILLDEDA 440
YL + +HRD+ A NIL++ +A
Sbjct: 128 EYLGSR---RCVHRDLAARNILVESEA 151
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 26/147 (17%)
Query: 307 LGRGGFGKVYKGR---LAD--GKLVAVKRLKEERTSGGELQ--FQTEVKIISMAVHRNLL 359
LG+G FG V R L D G LVAVK+L+ SG + Q FQ E++I+ A+H + +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQH---SGPDQQRDFQREIQILK-ALHSDFI 86
Query: 360 RLY---GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSA---RGL 413
Y + LV Y+ +G + L+ ++ L ++ L S+ +G+
Sbjct: 87 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL------DASRLLLYSSQICKGM 140
Query: 414 SYLHEHCDPKIIHRDVKAANILLDEDA 440
YL + +HRD+ A NIL++ +A
Sbjct: 141 EYLGSR---RCVHRDLAARNILVESEA 164
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 11/139 (7%)
Query: 298 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHR 356
+D F ++ LGRG VY+ + K A+K LK +T ++ +TE+ ++ H
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLK--KTVDKKI-VRTEIGVLLRLSHP 108
Query: 357 NLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYL 416
N+++L T TE LV +T G + R+ E+ K+I ++YL
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQI----LEAVAYL 164
Query: 417 HEHCDPKIIHRDVKAANIL 435
HE+ I+HRD+K N+L
Sbjct: 165 HEN---GIVHRDLKPENLL 180
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 7/144 (4%)
Query: 295 QVATDGFSNKNILGRGGFGKVYK-GRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMA 353
++ D F + LG G G V+K G ++A K + E Q E++++
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 64
Query: 354 VHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGL 413
++ YG + E + +M GS+ L+ + +P K+++ +GL
Sbjct: 65 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPE---QILGKVSIAVIKGL 120
Query: 414 SYLHEHCDPKIIHRDVKAANILLD 437
+YL E KI+HRDVK +NIL++
Sbjct: 121 TYLREKH--KIMHRDVKPSNILVN 142
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 12/145 (8%)
Query: 298 TDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEE--RTSGGELQFQTEVKIISMAV 354
+D + ILG GG +V+ R L D + VAVK L+ + R L+F+ E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 355 HRNLLRLY--GFCTTVTEKLLVYPYMTNGSV-ASRLRERQSSLPPLDWPTRKKIALGSAR 411
H ++ +Y G T L PY+ V LR+ + P+ ++ + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPL---PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
L++ H++ IIHRDVK ANIL+
Sbjct: 128 ALNFSHQN---GIIHRDVKPANILI 149
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 280 ELQLGQLKRFSLRELQVAT---DGFSNKNILGRGGFGKVYK-GRLADGKLVAVKRLKEER 335
E Q +L+ F ++ +V D F + LG G G V+K G ++A K + E
Sbjct: 46 EQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI 105
Query: 336 TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLP 395
Q E++++ ++ YG + E + +M GS+ L+ + +P
Sbjct: 106 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIP 164
Query: 396 PLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD 437
K+++ +GL+YL E KI+HRDVK +NIL++
Sbjct: 165 EQ---ILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVN 201
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 279 SELQLGQLKRFSLREL--------QVATDGFSNKNILGRGGFGKVYK-GRLADGKLVAVK 329
EL+L + +R L ++ D F + LG G G V+K G ++A K
Sbjct: 5 EELELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARK 64
Query: 330 RLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRE 389
+ E Q E++++ ++ YG + E + +M GS+ L+
Sbjct: 65 LIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK- 123
Query: 390 RQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD 437
+ +P K+++ +GL+YL E KI+HRDVK +NIL++
Sbjct: 124 KAGRIPEQ---ILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVN 166
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 7/144 (4%)
Query: 295 QVATDGFSNKNILGRGGFGKVYK-GRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMA 353
++ D F + LG G G V+K G ++A K + E Q E++++
Sbjct: 21 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 80
Query: 354 VHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGL 413
++ YG + E + +M GS+ L+ + +P K+++ +GL
Sbjct: 81 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPE---QILGKVSIAVIKGL 136
Query: 414 SYLHEHCDPKIIHRDVKAANILLD 437
+YL E KI+HRDVK +NIL++
Sbjct: 137 TYLRE--KHKIMHRDVKPSNILVN 158
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 69/160 (43%), Gaps = 44/160 (27%)
Query: 301 FSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHR---- 356
+++ +GRG FG+V+ R+K+++T FQ VK + + V R
Sbjct: 60 MTHQPRVGRGSFGEVH-------------RMKDKQTG-----FQCAVKKVRLEVFRVEEL 101
Query: 357 ---------NLLRLYGFCTTVTEKLLVYPYMT--NGSVASRLRERQSSLPPLDWPTRKKI 405
++ LYG V E V +M G +L ++ LP R
Sbjct: 102 VACAGLSSPRIVPLYG---AVREGPWVNIFMELLEGGSLGQLIKQMGCLPE----DRALY 154
Query: 406 ALGSA-RGLSYLHEHCDPKIIHRDVKAANILLDEDADQSS 444
LG A GL YLH +I+H DVKA N+LL D +++
Sbjct: 155 YLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAA 191
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 13/144 (9%)
Query: 299 DGFSNKNILGRGGFGKVYK------GRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM 352
D + LG G F V K G+ K + +RL R + + EV I+
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 353 AVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARG 412
H N++ L+ T+ +L+ ++ G + L E++S K+I G
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI----LDG 127
Query: 413 LSYLHEHCDPKIIHRDVKAANILL 436
+ YLH +I H D+K NI+L
Sbjct: 128 VHYLH---SKRIAHFDLKPENIML 148
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 13/147 (8%)
Query: 296 VATDGFSNKNILGRGGFGKVYK------GRLADGKLVAVKRLKEERTSGGELQFQTEVKI 349
+ D + LG G F V K G+ K + +RL R + + EV I
Sbjct: 23 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNI 82
Query: 350 ISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS 409
+ H N++ L+ T+ +L+ ++ G + L E++S K+I
Sbjct: 83 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI---- 138
Query: 410 ARGLSYLHEHCDPKIIHRDVKAANILL 436
G+ YLH +I H D+K NI+L
Sbjct: 139 LDGVHYLH---SKRIAHFDLKPENIML 162
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 69/160 (43%), Gaps = 44/160 (27%)
Query: 301 FSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHR---- 356
+++ +GRG FG+V+ R+K+++T FQ VK + + V R
Sbjct: 76 MTHQPRVGRGSFGEVH-------------RMKDKQTG-----FQCAVKKVRLEVFRVEEL 117
Query: 357 ---------NLLRLYGFCTTVTEKLLVYPYMT--NGSVASRLRERQSSLPPLDWPTRKKI 405
++ LYG V E V +M G +L ++ LP R
Sbjct: 118 VACAGLSSPRIVPLYG---AVREGPWVNIFMELLEGGSLGQLIKQMGCLPE----DRALY 170
Query: 406 ALGSA-RGLSYLHEHCDPKIIHRDVKAANILLDEDADQSS 444
LG A GL YLH +I+H DVKA N+LL D +++
Sbjct: 171 YLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAA 207
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 69/146 (47%), Gaps = 20/146 (13%)
Query: 296 VATDGFSNKNILGRGGFGK-VYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV 354
V F K++LG G G VY+G + D + VAVKR+ E S + + Q +
Sbjct: 21 VGKISFCPKDVLGHGAEGTIVYRG-MFDNRDVAVKRILPECFSFADREVQL---LRESDE 76
Query: 355 HRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRE--RQSSLPPLDWPTRKKIAL--GSA 410
H N++R FC TEK + Y+ A+ L+E Q L + I L +
Sbjct: 77 HPNVIRY--FC---TEKDRQFQYIAIELCAATLQEYVEQKDFAHLGL---EPITLLQQTT 128
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILL 436
GL++LH I+HRD+K NIL+
Sbjct: 129 SGLAHLH---SLNIVHRDLKPHNILI 151
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 306 ILGRGGFGKVYK--GRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLY 362
+LG+G FG+V K R+ + AVK + + + EV+++ H N+++L+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEY-AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
+ +V T G + + +R+ +I G++Y+H+H
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKR----FSEHDAARIIKQVFSGITYMHKH--- 140
Query: 423 KIIHRDVKAANILLD 437
I+HRD+K NILL+
Sbjct: 141 NIVHRDLKPENILLE 155
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 78/161 (48%), Gaps = 21/161 (13%)
Query: 284 GQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKE--ERTSGGE 340
G++ R LR+ ++ LG+G +G V+K G++VAVK++ + + ++ +
Sbjct: 1 GRVDRHVLRKYELVKK-------LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQ 53
Query: 341 LQFQTEVKIISMAVHRNLLRLYGFCTTVTEK--LLVYPYMTNGSVASRLRERQSSLPPLD 398
F+ + + ++ H N++ L ++ LV+ YM A R + L P+
Sbjct: 54 RTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVI---RANILEPV- 109
Query: 399 WPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
++ + + + YLH ++HRD+K +NILL+ +
Sbjct: 110 --HKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAE 145
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 13/147 (8%)
Query: 296 VATDGFSNKNILGRGGFGKVYK------GRLADGKLVAVKRLKEERTSGGELQFQTEVKI 349
+ D + LG G F V K G+ K + +RL R + + EV I
Sbjct: 2 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61
Query: 350 ISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS 409
+ H N++ L+ T+ +L+ ++ G + L E++S K+I
Sbjct: 62 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI---- 117
Query: 410 ARGLSYLHEHCDPKIIHRDVKAANILL 436
G+ YLH +I H D+K NI+L
Sbjct: 118 LDGVHYLH---SKRIAHFDLKPENIML 141
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 7/144 (4%)
Query: 295 QVATDGFSNKNILGRGGFGKVYK-GRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMA 353
++ D F + LG G G V K G ++A K + E Q E++++
Sbjct: 12 ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC 71
Query: 354 VHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGL 413
++ YG + E + +M GS+ L+E + + K+++ RGL
Sbjct: 72 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR----IPEEILGKVSIAVLRGL 127
Query: 414 SYLHEHCDPKIIHRDVKAANILLD 437
+YL E +I+HRDVK +NIL++
Sbjct: 128 AYLREKH--QIMHRDVKPSNILVN 149
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 62/160 (38%), Gaps = 33/160 (20%)
Query: 301 FSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLL 359
F LGRGGFG V++ + D A+KR++ + EVK ++ H ++
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 360 RLYG--FCTTVTEKLL-----VYPYMT-------------NGSVASRLRERQSSLPPLDW 399
R + TEKL VY Y+ NG RER L
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCL----- 121
Query: 400 PTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
I L A + +LH ++HRD+K +NI D
Sbjct: 122 ----HIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMD 154
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERT-SGGELQFQT-EVKIISMAVH 355
+ F ILG G F V R LA + A+K L++ ++ + T E ++S H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 356 RNLLRLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
++LY F EKL Y NG + +R+ S D + L
Sbjct: 74 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 128
Query: 415 YLHEHCDPKIIHRDVKAANILLDED 439
YLH IIHRD+K NILL+ED
Sbjct: 129 YLH---GKGIIHRDLKPENILLNED 150
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERT-SGGELQFQT-EVKIISMAVH 355
+ F ILG G F V R LA + A+K L++ ++ + T E ++S H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 356 RNLLRLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
++LY F EKL Y NG + +R+ S D + L
Sbjct: 89 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 143
Query: 415 YLHEHCDPKIIHRDVKAANILLDED 439
YLH IIHRD+K NILL+ED
Sbjct: 144 YLH---GKGIIHRDLKPENILLNED 165
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERT-SGGELQFQT-EVKIISMAVH 355
+ F ILG G F V R LA + A+K L++ ++ + T E ++S H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 356 RNLLRLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
++LY F EKL Y NG + +R+ S D + L
Sbjct: 89 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 143
Query: 415 YLHEHCDPKIIHRDVKAANILLDED 439
YLH IIHRD+K NILL+ED
Sbjct: 144 YLH---GKGIIHRDLKPENILLNED 165
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 7/130 (5%)
Query: 313 GKVYKGRLADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT--VT 369
G+++KGR G + VK LK + ++ F E + + H N+L + G C +
Sbjct: 24 GELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 370 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDV 429
L+ + GS+ + L E + + +D K AL ARG ++LH +P I +
Sbjct: 83 HPTLITHWXPYGSLYNVLHEGTNFV--VDQSQAVKFALDXARGXAFLHT-LEPLIPRHAL 139
Query: 430 KAANILLDED 439
+ ++ +DED
Sbjct: 140 NSRSVXIDED 149
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 11/136 (8%)
Query: 306 ILGRGGFGKVYKGRL-ADGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLY 362
++G+G FGKV R A+ AVK L+++ E +E ++ V L
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 363 GFCTTVTEKL-LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCD 421
F +KL V Y+ G + L+ + L P + A A L YLH
Sbjct: 105 HFSFQTADKLYFVLDYINGGELFYHLQRERCFLEP----RARFYAAEIASALGYLHSL-- 158
Query: 422 PKIIHRDVKAANILLD 437
I++RD+K NILLD
Sbjct: 159 -NIVYRDLKPENILLD 173
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 12/145 (8%)
Query: 298 TDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEE--RTSGGELQFQTEVKIISMAV 354
+D + ILG GG +V+ R L D + VAVK L+ + R L+F+ E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 355 HRNLLRLY--GFCTTVTEKLLVYPYMTNGSV-ASRLRERQSSLPPLDWPTRKKIALGSAR 411
H ++ +Y G T L PY+ V LR+ + P+ ++ + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPL---PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
L++ H++ IIHRDVK ANI++
Sbjct: 128 ALNFSHQN---GIIHRDVKPANIMI 149
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 12/145 (8%)
Query: 298 TDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEE--RTSGGELQFQTEVKIISMAV 354
+D + ILG GG +V+ R L D + VAVK L+ + R L+F+ E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 355 HRNLLRLY--GFCTTVTEKLLVYPYMTNGSV-ASRLRERQSSLPPLDWPTRKKIALGSAR 411
H ++ +Y G T L PY+ V LR+ + P+ ++ + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPL---PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
L++ H++ IIHRDVK ANI++
Sbjct: 128 ALNFSHQN---GIIHRDVKPANIMI 149
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 10/138 (7%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEER---TSGGELQFQTEVKIISMAVHRNLLRLYG 363
LG+GGF K ++ AD K V ++ + + E+ I H++++ +G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK 423
F +V S+ + R++ P ++I LG YLH + +
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLHRN---R 135
Query: 424 IIHRDVKAANILLDEDAD 441
+IHRD+K N+ L+ED +
Sbjct: 136 VIHRDLKLGNLFLNEDLE 153
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERT-SGGELQFQT-EVKIISMAVH 355
+ F ILG G F V R LA + A+K L++ ++ + T E ++S H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 356 RNLLRLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
++LY F EKL Y NG + +R+ S D + L
Sbjct: 68 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 122
Query: 415 YLHEHCDPKIIHRDVKAANILLDED 439
YLH IIHRD+K NILL+ED
Sbjct: 123 YLH---GKGIIHRDLKPENILLNED 144
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERT-SGGELQFQT-EVKIISMAVH 355
+ F ILG G F V R LA + A+K L++ ++ + T E ++S H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 356 RNLLRLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
++LY F EKL Y NG + +R+ S D + L
Sbjct: 70 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 124
Query: 415 YLHEHCDPKIIHRDVKAANILLDED 439
YLH IIHRD+K NILL+ED
Sbjct: 125 YLH---GKGIIHRDLKPENILLNED 146
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERT-SGGELQFQT-EVKIISMAVH 355
+ F ILG G F V R LA + A+K L++ ++ + T E ++S H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 356 RNLLRLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
++LY F EKL Y NG + +R+ S D + L
Sbjct: 67 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 121
Query: 415 YLHEHCDPKIIHRDVKAANILLDED 439
YLH IIHRD+K NILL+ED
Sbjct: 122 YLH---GKGIIHRDLKPENILLNED 143
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 301 FSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK--EERTSGGELQFQTEVKIISMAVHRN 357
F + +GRG F +VY+ L DG VA+K+++ + + E+ ++ H N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 358 LLRLYGFCTTVTEKLLVYPYMTNGSVASRLR--ERQSSLPPLDWPTRKKIALGSARGLSY 415
+++ Y E +V G ++ ++ ++Q L P + + L SA L +
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA--LEH 151
Query: 416 LHEHCDPKIIHRDVKAANILL 436
+H +++HRD+K AN+ +
Sbjct: 152 MHSR---RVMHRDIKPANVFI 169
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 17/159 (10%)
Query: 296 VATDGFSNKNILGRGGFGKVYKG-RLADGKLVAVKRLK----EERTSGGELQFQTEVKII 350
+ D + LG G +G+VYK + VA+KR++ EE G ++ EV ++
Sbjct: 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR---EVSLL 87
Query: 351 SMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSA 410
HRN++ L L++ Y N L++ P + K
Sbjct: 88 KELQHRNIIELKSVIHHNHRLHLIFEYAEND-----LKKYMDKNPDVSMRVIKSFLYQLI 142
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTILR 449
G+++ H + +HRD+K N+LL +D S +L+
Sbjct: 143 NGVNFCHSR---RCLHRDLKPQNLLLSV-SDASETPVLK 177
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERT-SGGELQFQT-EVKIISMAVH 355
+ F ILG G F V R LA + A+K L++ ++ + T E ++S H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 356 RNLLRLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
++LY F EKL Y NG + +R+ S D + L
Sbjct: 69 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 123
Query: 415 YLHEHCDPKIIHRDVKAANILLDED 439
YLH IIHRD+K NILL+ED
Sbjct: 124 YLH---GKGIIHRDLKPENILLNED 145
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERT-SGGELQFQT-EVKIISMAVH 355
+ F ILG G F V R LA + A+K L++ ++ + T E ++S H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 356 RNLLRLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
++LY F EKL Y NG + +R+ S D + L
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 144
Query: 415 YLHEHCDPKIIHRDVKAANILLDED 439
YLH IIHRD+K NILL+ED
Sbjct: 145 YLH---GKGIIHRDLKPENILLNED 166
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 10/138 (7%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEER---TSGGELQFQTEVKIISMAVHRNLLRLYG 363
LG+GGF K ++ AD K V ++ + + E+ I H++++ +G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK 423
F +V S+ + R++ P ++I LG YLH + +
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLHRN---R 137
Query: 424 IIHRDVKAANILLDEDAD 441
+IHRD+K N+ L+ED +
Sbjct: 138 VIHRDLKLGNLFLNEDLE 155
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERT-SGGELQFQT-EVKIISMAVH 355
+ F ILG G F V R LA + A+K L++ ++ + T E ++S H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 356 RNLLRLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
++LY F EKL Y NG + +R+ S D + L
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 146
Query: 415 YLHEHCDPKIIHRDVKAANILLDED 439
YLH IIHRD+K NILL+ED
Sbjct: 147 YLH---GKGIIHRDLKPENILLNED 168
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 10/138 (7%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEER---TSGGELQFQTEVKIISMAVHRNLLRLYG 363
LG+GGF K ++ AD K V ++ + + E+ I H++++ +G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK 423
F +V S+ + R++ P ++I LG YLH + +
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLHRN---R 137
Query: 424 IIHRDVKAANILLDEDAD 441
+IHRD+K N+ L+ED +
Sbjct: 138 VIHRDLKLGNLFLNEDLE 155
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERT-SGGELQFQT-EVKIISMAVH 355
+ F ILG G F V R LA + A+K L++ ++ + T E ++S H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 356 RNLLRLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
++LY F EKL Y NG + +R+ S D + L
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 144
Query: 415 YLHEHCDPKIIHRDVKAANILLDED 439
YLH IIHRD+K NILL+ED
Sbjct: 145 YLH---GKGIIHRDLKPENILLNED 166
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERT-SGGELQFQT-EVKIISMAVH 355
+ F ILG G F V R LA + A+K L++ ++ + T E ++S H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 356 RNLLRLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
++LY F EKL Y NG + +R+ S D + L
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 144
Query: 415 YLHEHCDPKIIHRDVKAANILLDED 439
YLH IIHRD+K NILL+ED
Sbjct: 145 YLH---GKGIIHRDLKPENILLNED 166
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERT-SGGELQFQT-EVKIISMAVH 355
+ F ILG G F V R LA + A+K L++ ++ + T E ++S H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 356 RNLLRLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
++LY F EKL Y NG + +R+ S D + L
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 146
Query: 415 YLHEHCDPKIIHRDVKAANILLDED 439
YLH IIHRD+K NILL+ED
Sbjct: 147 YLH---GKGIIHRDLKPENILLNED 168
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERT-SGGELQFQT-EVKIISMAVH 355
+ F ILG G F V R LA + A+K L++ ++ + T E ++S H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 356 RNLLRLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
++LY F EKL Y NG + +R+ S D + L
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 146
Query: 415 YLHEHCDPKIIHRDVKAANILLDED 439
YLH IIHRD+K NILL+ED
Sbjct: 147 YLH---GKGIIHRDLKPENILLNED 168
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERT-SGGELQFQT-EVKIISMAVH 355
+ F ILG G F V R LA + A+K L++ ++ + T E ++S H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 356 RNLLRLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
++LY F EKL Y NG + +R+ S D + L
Sbjct: 95 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 149
Query: 415 YLHEHCDPKIIHRDVKAANILLDED 439
YLH IIHRD+K NILL+ED
Sbjct: 150 YLH---GKGIIHRDLKPENILLNED 171
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 10/138 (7%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEER---TSGGELQFQTEVKIISMAVHRNLLRLYG 363
LG+GGF K ++ AD K V ++ + + E+ I H++++ +G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK 423
F +V S+ + R++ P ++I LG YLH + +
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLHRN---R 159
Query: 424 IIHRDVKAANILLDEDAD 441
+IHRD+K N+ L+ED +
Sbjct: 160 VIHRDLKLGNLFLNEDLE 177
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERT-SGGELQFQT-EVKIISMAVH 355
+ F ILG G F V R LA + A+K L++ ++ + T E ++S H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 356 RNLLRLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
++LY F EKL Y NG + +R+ S D + L
Sbjct: 93 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 147
Query: 415 YLHEHCDPKIIHRDVKAANILLDED 439
YLH IIHRD+K NILL+ED
Sbjct: 148 YLH---GKGIIHRDLKPENILLNED 169
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERT-SGGELQFQT-EVKIISMAVH 355
+ F ILG G F V R LA + A+K L++ ++ + T E ++S H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 356 RNLLRLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
++LY F EKL Y NG + +R+ S D + L
Sbjct: 93 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 147
Query: 415 YLHEHCDPKIIHRDVKAANILLDED 439
YLH IIHRD+K NILL+ED
Sbjct: 148 YLH---GKGIIHRDLKPENILLNED 169
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 306 ILGRGGFGKVYK--GRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLY 362
+LG+G FG+V K R+ + AVK + + + EV+++ H N+++L+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEY-AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
+ +V T G + + +R+ +I G++Y+H+H
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKR----FSEHDAARIIKQVFSGITYMHKH--- 140
Query: 423 KIIHRDVKAANILLD 437
I+HRD+K NILL+
Sbjct: 141 NIVHRDLKPENILLE 155
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 10/138 (7%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEER---TSGGELQFQTEVKIISMAVHRNLLRLYG 363
LG+GGF K ++ AD K V ++ + + E+ I H++++ +G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK 423
F +V S+ + R++ P ++I LG YLH + +
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLHRN---R 141
Query: 424 IIHRDVKAANILLDEDAD 441
+IHRD+K N+ L+ED +
Sbjct: 142 VIHRDLKLGNLFLNEDLE 159
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 306 ILGRGGFGKVYK--GRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLY 362
+LG+G FG+V K R+ + AVK + + + EV+++ H N+++L+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEY-AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
+ +V T G + + +R+ +I G++Y+H+H
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKR----FSEHDAARIIKQVFSGITYMHKH--- 140
Query: 423 KIIHRDVKAANILLD 437
I+HRD+K NILL+
Sbjct: 141 NIVHRDLKPENILLE 155
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 10/138 (7%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEER---TSGGELQFQTEVKIISMAVHRNLLRLYG 363
LG+GGF K ++ AD K V ++ + + E+ I H++++ +G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK 423
F +V S+ + R++ P ++I LG YLH + +
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLHRN---R 161
Query: 424 IIHRDVKAANILLDEDAD 441
+IHRD+K N+ L+ED +
Sbjct: 162 VIHRDLKLGNLFLNEDLE 179
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 66/153 (43%), Gaps = 15/153 (9%)
Query: 291 LRELQVATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLK--EERTSGGELQFQTEV 347
+R LQ+ + + ++GRG FG+V R A K+ A+K L E F E
Sbjct: 67 IRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEER 126
Query: 348 KIISMAVHRNLLRLYGFCTTVTEKLL--VYPYMTNGSVASRLRERQSSLPPLDWPTRKKI 405
I++ A +++L FC +K L V YM G + + + P W K
Sbjct: 127 DIMAFANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDV---PEKWA--KFY 179
Query: 406 ALGSARGLSYLHEHCDPKIIHRDVKAANILLDE 438
L +H +IHRDVK N+LLD+
Sbjct: 180 TAEVVLALDAIHSM---GLIHRDVKPDNMLLDK 209
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 20/140 (14%)
Query: 305 NILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYG 363
+LG G + KV L +GK AVK ++++ F+ + ++N+L L
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIE 78
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLR------ERQSSLPPLDWPTRKKIALGSARGLSYLH 417
F T LV+ + GS+ + ++ ER++S ++ A L +LH
Sbjct: 79 FFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREAS----------RVVRDVAAALDFLH 128
Query: 418 EHCDPKIIHRDVKAANILLD 437
I HRD+K NIL +
Sbjct: 129 TK---GIAHRDLKPENILCE 145
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERT-SGGELQFQT-EVKIISMAVH 355
+ F ILG G F V R LA + A+K L++ ++ + T E ++S H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 356 RNLLRLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
++LY F EKL Y NG + +R+ S D + L
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 146
Query: 415 YLHEHCDPKIIHRDVKAANILLDED 439
YLH IIHRD+K NILL+ED
Sbjct: 147 YLH---GKGIIHRDLKPENILLNED 168
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 9/148 (6%)
Query: 294 LQVATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISM 352
++V D LGRG +G V K R + G+++AVKR++ S + + ++ I
Sbjct: 2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMR 61
Query: 353 AVHRNL-LRLYGFCTTVTEKLLVYPYMTNG--SVASRLRERQSSLPPLDWPTRKKIALGS 409
V + YG + + M ++ ++ ++P KIA+
Sbjct: 62 TVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPE---DILGKIAVSI 118
Query: 410 ARGLSYLHEHCDPKIIHRDVKAANILLD 437
+ L +LH +IHRDVK +N+L++
Sbjct: 119 VKALEHLHSKL--SVIHRDVKPSNVLIN 144
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERT-SGGELQFQT-EVKIISMAVH 355
+ F ILG G F V R LA + A+K L++ ++ + T E ++S H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 356 RNLLRLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
++LY F EKL Y NG + +R+ S D + L
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 146
Query: 415 YLHEHCDPKIIHRDVKAANILLDED 439
YLH IIHRD+K NILL+ED
Sbjct: 147 YLH---GKGIIHRDLKPENILLNED 168
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 307 LGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFC 365
+G+G G VY +A G+ VA++++ ++ EL E+ ++ + N++
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-NEILVMRENKNPNIVNYLDSY 86
Query: 366 TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKII 425
E +V Y+ GS+ + E +D + + L +LH + ++I
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVI 138
Query: 426 HRDVKAANILLDEDA 440
HRD+K+ NILL D
Sbjct: 139 HRDIKSDNILLGMDG 153
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERT-SGGELQFQT-EVKIISMAVH 355
+ F ILG G F V R LA + A+K L++ ++ + T E ++S H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 356 RNLLRLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
++LY F EKL Y NG + +R+ S D + L
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYIRKIGS----FDETCTRFYTAEIVSALE 146
Query: 415 YLHEHCDPKIIHRDVKAANILLDED 439
YLH IIHRD+K NILL+ED
Sbjct: 147 YLH---GKGIIHRDLKPENILLNED 168
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 307 LGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFC 365
+G+G G VY +A G+ VA++++ ++ EL E+ ++ + N++
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-NEILVMRENKNPNIVNYLDSY 86
Query: 366 TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKII 425
E +V Y+ GS+ + E +D + + L +LH + ++I
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVI 138
Query: 426 HRDVKAANILLDEDA 440
HRD+K+ NILL D
Sbjct: 139 HRDIKSDNILLGMDG 153
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 307 LGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFC 365
+G+G G VY +A G+ VA++++ ++ EL E+ ++ + N++
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-NEILVMRENKNPNIVNYLDSY 86
Query: 366 TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKII 425
E +V Y+ GS+ + E +D + + L +LH + ++I
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVI 138
Query: 426 HRDVKAANILLDEDA 440
HRD+K+ NILL D
Sbjct: 139 HRDIKSDNILLGMDG 153
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 22/107 (20%)
Query: 342 QFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPT 401
Q E+ I+ H N+++L E L YM + E + P ++ PT
Sbjct: 82 QVYQEIAILKKLDHPNVVKLVEVLDDPNEDHL---YM--------VFELVNQGPVMEVPT 130
Query: 402 RKKIALGSAR--------GLSYLHEHCDPKIIHRDVKAANILLDEDA 440
K ++ AR G+ YLH KIIHRD+K +N+L+ ED
Sbjct: 131 LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDG 174
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 307 LGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFC 365
+G+G G VY +A G+ VA++++ ++ EL E+ ++ + N++
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-NEILVMRENKNPNIVNYLDSY 87
Query: 366 TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKII 425
E +V Y+ GS+ + E +D + + L +LH + ++I
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVI 139
Query: 426 HRDVKAANILLDEDA 440
HRD+K+ NILL D
Sbjct: 140 HRDIKSDNILLGMDG 154
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 305 NILGRGGFGKVY----KGRLADGKLVAVKRLKEERTSGGE-LQFQTEVKIISMAVHRNLL 359
+LG+G FGKV+ R G L A+K LK+ + ++ + E I++ H ++
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS-ARGLSYLHE 418
+L+ T + L+ ++ G + +RL ++ D K L A GL +LH
Sbjct: 94 KLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEED----VKFYLAELALGLDHLHS 148
Query: 419 HCDPKIIHRDVKAANILLDEDA 440
II+RD+K NILLDE+
Sbjct: 149 LG---IIYRDLKPENILLDEEG 167
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 18/147 (12%)
Query: 307 LGRGGFGKVYK------GRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
LG G FG V++ GR+ K + ++ T + E+ I++ H L+
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYT------VKNEISIMNQLHHPKLIN 112
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
L+ E +L+ +++ G + R+ + + + A GL ++HEH
Sbjct: 113 LHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQA---CEGLKHMHEHS 169
Query: 421 DPKIIHRDVKAANILLDEDADQSSKTI 447
I+H D+K NI+ + S K I
Sbjct: 170 ---IVHLDIKPENIMCETKKASSVKII 193
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 12/140 (8%)
Query: 306 ILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNL--LRLYG 363
LG+GGF K Y+ D K V ++ + S Q E +A+H++L + G
Sbjct: 33 FLGKGGFAKCYEITDMDTKEVFAGKVVPK--SMLLKPHQKEKMSTEIAIHKSLDNPHVVG 90
Query: 364 FCTTVTEKLLVYPYMTNGSVAS--RLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCD 421
F + VY + S L +R+ ++ P + + +G+ YLH +
Sbjct: 91 FHGFFEDDDFVYVVLEICRRRSLLELHKRRKAV---TEPEARYFMRQTIQGVQYLHNN-- 145
Query: 422 PKIIHRDVKAANILLDEDAD 441
++IHRD+K N+ L++D D
Sbjct: 146 -RVIHRDLKLGNLFLNDDMD 164
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 12/139 (8%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNL--LRLYGF 364
LG+GGF K Y+ D K V ++ + S Q E +A+H++L + GF
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPK--SMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 365 CTTVTEKLLVYPYMTNGSVAS--RLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
+ VY + S L +R+ ++ P + + +G+ YLH +
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLELHKRRKAV---TEPEARYFMRQTIQGVQYLHNN--- 161
Query: 423 KIIHRDVKAANILLDEDAD 441
++IHRD+K N+ L++D D
Sbjct: 162 RVIHRDLKLGNLFLNDDMD 180
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 12/139 (8%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNL--LRLYGF 364
LG+GGF K Y+ D K V ++ + S Q E +A+H++L + GF
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPK--SMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 365 CTTVTEKLLVYPYMTNGSVAS--RLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
+ VY + S L +R+ ++ P + + +G+ YLH +
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLELHKRRKAV---TEPEARYFMRQTIQGVQYLHNN--- 161
Query: 423 KIIHRDVKAANILLDEDAD 441
++IHRD+K N+ L++D D
Sbjct: 162 RVIHRDLKLGNLFLNDDMD 180
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 12/139 (8%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNL--LRLYGF 364
LG+GGF K Y+ D K V ++ + S Q E +A+H++L + GF
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPK--SMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 365 CTTVTEKLLVYPYMTNGSVAS--RLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
+ VY + S L +R+ ++ P + + +G+ YLH +
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLELHKRRKAV---TEPEARYFMRQTIQGVQYLHNN--- 161
Query: 423 KIIHRDVKAANILLDEDAD 441
++IHRD+K N+ L++D D
Sbjct: 162 RVIHRDLKLGNLFLNDDMD 180
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 20/144 (13%)
Query: 307 LGRGGFGKVYKGRLADGKLV-AVKRLKEERTSGGEL------------QFQTEVKIISMA 353
LG G +G+V + +G A+K +K+ + G + E+ ++
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 354 VHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGL 413
H N+++L+ LV + G + ++ R D I G+
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH----KFDECDAANIMKQILSGI 159
Query: 414 SYLHEHCDPKIIHRDVKAANILLD 437
YLH+H I+HRD+K NILL+
Sbjct: 160 CYLHKH---NIVHRDIKPENILLE 180
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 18/142 (12%)
Query: 306 ILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYG 363
+LG GGFG VY G R++D VA+K ++++R S GEL T V + + + + G
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV---SSG 67
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPL-DWPTRKKIALGSARGLSYLHE---- 418
F + +LL + + V + ER + L D+ T + AL S+ +
Sbjct: 68 FSGVI--RLLDWFERPDSFVL--ILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 122
Query: 419 --HC-DPKIIHRDVKAANILLD 437
HC + ++HRD+K NIL+D
Sbjct: 123 VRHCHNXGVLHRDIKDENILID 144
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 62/145 (42%), Gaps = 12/145 (8%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERT-SGGELQFQT-EVKIISMAVH 355
+ F ILG G F R LA + A+K L++ ++ + T E ++S H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 356 RNLLRLYGFCTTVTEKLLV-YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
++LY F EKL Y NG + +R+ S D + L
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 144
Query: 415 YLHEHCDPKIIHRDVKAANILLDED 439
YLH IIHRD+K NILL+ED
Sbjct: 145 YLH---GKGIIHRDLKPENILLNED 166
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 9/150 (6%)
Query: 292 RELQVATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKII 350
+ +V D LGRG +G V K R + G+++AVKR++ S + + ++ I
Sbjct: 44 QNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS 103
Query: 351 SMAVHRNL-LRLYGFCTTVTEKLLVYPYMTNG--SVASRLRERQSSLPPLDWPTRKKIAL 407
V + YG + + M ++ ++ ++P KIA+
Sbjct: 104 MRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPE---DILGKIAV 160
Query: 408 GSARGLSYLHEHCDPKIIHRDVKAANILLD 437
+ L +LH +IHRDVK +N+L++
Sbjct: 161 SIVKALEHLHSKL--SVIHRDVKPSNVLIN 188
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKR-LKEERTSGGELQFQTEVKIISMAVHR 356
D F + + G+G FG V G+ + G VA+K+ +++ R ELQ ++ ++ H
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLH---HP 79
Query: 357 NLLRLYGFCTTVTEK---------LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIAL 407
N+++L + T+ E+ ++ Y T RQ + PP+ K
Sbjct: 80 NIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPI---LIKVFLF 136
Query: 408 GSARGLSYLHEHCDPKIIHRDVKAANILLDE 438
R + LH + HRD+K N+L++E
Sbjct: 137 QLIRSIGCLHLP-SVNVCHRDIKPHNVLVNE 166
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 18/142 (12%)
Query: 306 ILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYG 363
+LG GGFG VY G R++D VA+K ++++R S GEL T V + + + + G
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV---SSG 67
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPL-DWPTRKKIALGSARGLSYLHE---- 418
F + +LL + + V + ER + L D+ T + AL S+ +
Sbjct: 68 FSGVI--RLLDWFERPDSFVL--ILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 122
Query: 419 --HC-DPKIIHRDVKAANILLD 437
HC + ++HRD+K NIL+D
Sbjct: 123 VRHCHNCGVLHRDIKDENILID 144
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 18/142 (12%)
Query: 306 ILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYG 363
+LG GGFG VY G R++D VA+K ++++R S GEL T V + + + + G
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV---SSG 71
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPL-DWPTRKKIALGSARGLSYLHE---- 418
F + +LL + + V + ER + L D+ T + AL S+ +
Sbjct: 72 FSGVI--RLLDWFERPDSFVL--ILERMEPVQDLFDFITERG-ALQEELARSFFWQVLEA 126
Query: 419 --HC-DPKIIHRDVKAANILLD 437
HC + ++HRD+K NIL+D
Sbjct: 127 VRHCHNCGVLHRDIKDENILID 148
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 306 ILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYG 363
+LG GGFG VY G R++D VA+K ++++R S GEL T V + ++ L
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM-------EVVLLKK 96
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPL-DWPTRKKIALGSARGLSYLHE---- 418
+ + + + + + ER + L D+ T + AL S+ +
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 155
Query: 419 --HC-DPKIIHRDVKAANILLD 437
HC + ++HRD+K NIL+D
Sbjct: 156 VRHCHNCGVLHRDIKDENILID 177
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 306 ILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYG 363
+LG GGFG VY G R++D VA+K ++++R S GEL T V + ++ L
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM-------EVVLLKK 95
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPL-DWPTRKKIALGSARGLSYLHE---- 418
+ + + + + + ER + L D+ T + AL S+ +
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 154
Query: 419 --HC-DPKIIHRDVKAANILLD 437
HC + ++HRD+K NIL+D
Sbjct: 155 VRHCHNCGVLHRDIKDENILID 176
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 18/142 (12%)
Query: 306 ILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYG 363
+LG GGFG VY G R++D VA+K ++++R S GEL T V + + + + G
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK---VSSG 114
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPL-DWPTRKKIALGSARGLSYLHE---- 418
F + +LL + + V + ER + L D+ T + AL S+ +
Sbjct: 115 FSGVI--RLLDWFERPDSFVL--ILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 169
Query: 419 --HC-DPKIIHRDVKAANILLD 437
HC + ++HRD+K NIL+D
Sbjct: 170 VRHCHNCGVLHRDIKDENILID 191
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 58/141 (41%), Gaps = 24/141 (17%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVK----------RLKEERTSGGELQFQTEVKIISMAVHR 356
LG GG VY LA+ ++ +K R KEE +F+ EV S H+
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLK----RFEREVHNSSQLSHQ 71
Query: 357 NLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYL 416
N++ + LV Y+ + L E S PL T G+ +
Sbjct: 72 NIVSMIDVDEEDDCYYLVMEYIEGPT----LSEYIESHGPLSVDTAINFTNQILDGIKHA 127
Query: 417 HEHCDPKIIHRDVKAANILLD 437
H D +I+HRD+K NIL+D
Sbjct: 128 H---DMRIVHRDIKPQNILID 145
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 306 ILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYG 363
+LG GGFG VY G R++D VA+K ++++R S GEL T V + ++ L
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM-------EVVLLKK 63
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPL-DWPTRKKIALGSARGLSYLHE---- 418
+ + + + + + ER + L D+ T + AL S+ +
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 122
Query: 419 --HC-DPKIIHRDVKAANILLD 437
HC + ++HRD+K NIL+D
Sbjct: 123 VRHCHNCGVLHRDIKDENILID 144
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 66/153 (43%), Gaps = 27/153 (17%)
Query: 301 FSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLL 359
F ++G GGFG+V+K + DGK +KR+K + EVK ++ H N++
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA-----EREVKALAKLDHVNIV 67
Query: 360 RLYG------FCTTVTEK----------LLVYPYMTNGSVASRLRERQSSLPPLDWPTRK 403
G + + K + + G++ + +R+ LD
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE--KLDKVLAL 125
Query: 404 KIALGSARGLSYLHEHCDPKIIHRDVKAANILL 436
++ +G+ Y+H K+I+RD+K +NI L
Sbjct: 126 ELFEQITKGVDYIHS---KKLINRDLKPSNIFL 155
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 18/142 (12%)
Query: 306 ILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYG 363
+LG GGFG VY G R++D VA+K ++++R S GEL T V + + + + G
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV---SSG 99
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPL-DWPTRKKIALGSARGLSYLHE---- 418
F + +LL + + V + ER + L D+ T + AL S+ +
Sbjct: 100 FSGVI--RLLDWFERPDSFVL--ILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 154
Query: 419 --HC-DPKIIHRDVKAANILLD 437
HC + ++HRD+K NIL+D
Sbjct: 155 VRHCHNCGVLHRDIKDENILID 176
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 306 ILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYG 363
+LG GGFG VY G R++D VA+K ++++R S GEL T V + ++ L
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM-------EVVLLKK 95
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPL-DWPTRKKIALGSARGLSYLHE---- 418
+ + + + + + ER + L D+ T + AL S+ +
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 154
Query: 419 --HC-DPKIIHRDVKAANILLD 437
HC + ++HRD+K NIL+D
Sbjct: 155 VRHCHNCGVLHRDIKDENILID 176
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 18/157 (11%)
Query: 291 LRELQVATDGFSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSG-GELQFQTEVK 348
++E + + +LG GGFG VY G R++D VA+K ++++R S GEL T V
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 349 IISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPL-DWPTRKKIAL 407
+ + + + GF + +LL + + V + ER + L D+ T + AL
Sbjct: 61 MEVVLLKKV---SSGFSGVI--RLLDWFERPDSFVL--ILERPEPVQDLFDFITERG-AL 112
Query: 408 GSARGLSYLHE------HC-DPKIIHRDVKAANILLD 437
S+ + HC + ++HRD+K NIL+D
Sbjct: 113 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 149
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 306 ILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYG 363
+LG GGFG VY G R++D VA+K ++++R S GEL T V + ++ L
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM-------EVVLLKK 96
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPL-DWPTRKKIALGSARGLSYLHE---- 418
+ + + + + + ER + L D+ T + AL S+ +
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 155
Query: 419 --HC-DPKIIHRDVKAANILLD 437
HC + ++HRD+K NIL+D
Sbjct: 156 VRHCHNCGVLHRDIKDENILID 177
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 18/157 (11%)
Query: 291 LRELQVATDGFSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSG-GELQFQTEVK 348
++E + + +LG GGFG VY G R++D VA+K ++++R S GEL T V
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 349 IISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPL-DWPTRKKIAL 407
+ + + + GF + +LL + + V + ER + L D+ T + AL
Sbjct: 61 MEVVLLKKV---SSGFSGVI--RLLDWFERPDSFVL--ILERPEPVQDLFDFITERG-AL 112
Query: 408 GSARGLSYLHE------HC-DPKIIHRDVKAANILLD 437
S+ + HC + ++HRD+K NIL+D
Sbjct: 113 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 149
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 20/140 (14%)
Query: 307 LGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFC 365
+G G G V R G+ VAVK + + EL F EV I+ H N++ +Y
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLF-NEVVIMRDYQHFNVVEMYKSY 111
Query: 366 TTVTEKLLVYPYMTNGSVAS-----RLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
E ++ ++ G++ RL E Q + + + L+YLH
Sbjct: 112 LVGEELWVLMEFLQGGALTDIVSQVRLNEEQIA----------TVCEAVLQALAYLHAQ- 160
Query: 421 DPKIIHRDVKAANILLDEDA 440
+IHRD+K+ +ILL D
Sbjct: 161 --GVIHRDIKSDSILLTLDG 178
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 306 ILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYG 363
+LG GGFG VY G R++D VA+K ++++R S GEL T V + ++ L
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM-------EVVLLKK 95
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPL-DWPTRKKIALGSARGLSYLHE---- 418
+ + + + + + ER + L D+ T + AL S+ +
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 154
Query: 419 --HC-DPKIIHRDVKAANILLD 437
HC + ++HRD+K NIL+D
Sbjct: 155 VRHCHNCGVLHRDIKDENILID 176
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 18/142 (12%)
Query: 306 ILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYG 363
+LG GGFG VY G R++D VA+K ++++R S GEL T V + + + + G
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV---SSG 114
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPL-DWPTRKKIALGSARGLSYLHE---- 418
F + +LL + + V + ER + L D+ T + AL S+ +
Sbjct: 115 FSGVI--RLLDWFERPDSFVL--ILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 169
Query: 419 --HC-DPKIIHRDVKAANILLD 437
HC + ++HRD+K NIL+D
Sbjct: 170 VRHCHNCGVLHRDIKDENILID 191
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 306 ILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYG 363
+LG GGFG VY G R++D VA+K ++++R S GEL T V + ++ L
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM-------EVVLLKK 96
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPL-DWPTRKKIALGSARGLSYLHE---- 418
+ + + + + + ER + L D+ T + AL S+ +
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 155
Query: 419 --HC-DPKIIHRDVKAANILLD 437
HC + ++HRD+K NIL+D
Sbjct: 156 VRHCHNCGVLHRDIKDENILID 177
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 18/142 (12%)
Query: 306 ILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYG 363
+LG GGFG VY G R++D VA+K ++++R S GEL T V + + + + G
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV---SSG 70
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPL-DWPTRKKIALGSARGLSYLHE---- 418
F + +LL + + V + ER + L D+ T + AL S+ +
Sbjct: 71 FSGVI--RLLDWFERPDSFVL--ILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 125
Query: 419 --HC-DPKIIHRDVKAANILLD 437
HC + ++HRD+K NIL+D
Sbjct: 126 VRHCHNCGVLHRDIKDENILID 147
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 18/157 (11%)
Query: 291 LRELQVATDGFSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSG-GELQFQTEVK 348
++E + + +LG GGFG VY G R++D VA+K ++++R S GEL T V
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 349 IISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPL-DWPTRKKIAL 407
+ + + + GF + +LL + + V + ER + L D+ T + AL
Sbjct: 61 MEVVLLKKV---SSGFSGVI--RLLDWFERPDSFVL--ILERPEPVQDLFDFITERG-AL 112
Query: 408 GSARGLSYLHE------HC-DPKIIHRDVKAANILLD 437
S+ + HC + ++HRD+K NIL+D
Sbjct: 113 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 149
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 23/155 (14%)
Query: 294 LQVATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISM 352
+V D LGRG +G V K R + G++ AVKR++ S + + ++ I
Sbjct: 29 FEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXR 88
Query: 353 AVHRNL-LRLYG---------FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTR 402
V + YG C + + L Y ++ ++ ++P
Sbjct: 89 TVDCPFTVTFYGALFREGDVWICXELXDTSLDKFY-------KQVIDKGQTIPE---DIL 138
Query: 403 KKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD 437
KIA+ + L +LH +IHRDVK +N+L++
Sbjct: 139 GKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLIN 171
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 18/142 (12%)
Query: 306 ILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYG 363
+LG GGFG VY G R++D VA+K ++++R S GEL T V + + + + G
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK---VSSG 100
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPL-DWPTRKKIALGSARGLSYLHE---- 418
F + +LL + + V + ER + L D+ T + AL S+ +
Sbjct: 101 FSGVI--RLLDWFERPDSFVL--ILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 155
Query: 419 --HC-DPKIIHRDVKAANILLD 437
HC + ++HRD+K NIL+D
Sbjct: 156 VRHCHNCGVLHRDIKDENILID 177
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 18/142 (12%)
Query: 306 ILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYG 363
+LG GGFG VY G R++D VA+K ++++R S GEL T V + + + + G
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV---SSG 71
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPL-DWPTRKKIALGSARGLSYLHE---- 418
F + +LL + + V + ER + L D+ T + AL S+ +
Sbjct: 72 FSGVI--RLLDWFERPDSFVL--ILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 126
Query: 419 --HC-DPKIIHRDVKAANILLD 437
HC + ++HRD+K NIL+D
Sbjct: 127 VRHCHNCGVLHRDIKDENILID 148
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 18/157 (11%)
Query: 291 LRELQVATDGFSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSG-GELQFQTEVK 348
++E + + +LG GGFG VY G R++D VA+K ++++R S GEL T V
Sbjct: 23 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 82
Query: 349 IISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPL-DWPTRKKIAL 407
+ + + + GF + +LL + + V + ER + L D+ T + AL
Sbjct: 83 MEVVLLKKV---SSGFSGVI--RLLDWFERPDSFVL--ILERPEPVQDLFDFITERG-AL 134
Query: 408 GSARGLSYLHE------HC-DPKIIHRDVKAANILLD 437
S+ + HC + ++HRD+K NIL+D
Sbjct: 135 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 171
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 14/142 (9%)
Query: 306 ILGRGGFGKVYKGRLA----DGKLVAVKRLKEE---RTSGGELQFQTEVKIISMAVHRNL 358
+LG+GG+GKV++ R GK+ A+K LK+ R + + E I+ H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 359 LRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE 418
+ L T + L+ Y++ G + +L + +I++ L +LH+
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM----ALGHLHQ 139
Query: 419 HCDPKIIHRDVKAANILLDEDA 440
II+RD+K NI+L+
Sbjct: 140 KG---IIYRDLKPENIMLNHQG 158
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 306 ILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYG 363
+LG GGFG VY G R++D VA+K ++++R S GEL T V + ++ L
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM-------EVVLLKK 115
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPL-DWPTRKKIALGSARGLSYLHE---- 418
+ + + + + + ER + L D+ T + AL S+ +
Sbjct: 116 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 174
Query: 419 --HC-DPKIIHRDVKAANILLD 437
HC + ++HRD+K NIL+D
Sbjct: 175 VRHCHNCGVLHRDIKDENILID 196
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 306 ILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYG 363
+LG GGFG VY G R++D VA+K ++++R S GEL T V + ++ L
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM-------EVVLLKK 82
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPL-DWPTRKKIALGSARGLSYLHE---- 418
+ + + + + + ER + L D+ T + AL S+ +
Sbjct: 83 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 141
Query: 419 --HC-DPKIIHRDVKAANILLD 437
HC + ++HRD+K NIL+D
Sbjct: 142 VRHCHNCGVLHRDIKDENILID 163
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 14/142 (9%)
Query: 306 ILGRGGFGKVYKGRLA----DGKLVAVKRLKEE---RTSGGELQFQTEVKIISMAVHRNL 358
+LG+GG+GKV++ R GK+ A+K LK+ R + + E I+ H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 359 LRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE 418
+ L T + L+ Y++ G + +L + +I++ L +LH+
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM----ALGHLHQ 139
Query: 419 HCDPKIIHRDVKAANILLDEDA 440
II+RD+K NI+L+
Sbjct: 140 KG---IIYRDLKPENIMLNHQG 158
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 306 ILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYG 363
+LG GGFG VY G R++D VA+K ++++R S GEL T V + ++ L
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM-------EVVLLKK 83
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPL-DWPTRKKIALGSARGLSYLHE---- 418
+ + + + + + ER + L D+ T + AL S+ +
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 142
Query: 419 --HC-DPKIIHRDVKAANILLD 437
HC + ++HRD+K NIL+D
Sbjct: 143 VRHCHNCGVLHRDIKDENILID 164
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 306 ILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYG 363
+LG GGFG VY G R++D VA+K ++++R S GEL T V + ++ L
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM-------EVVLLKK 83
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPL-DWPTRKKIALGSARGLSYLHE---- 418
+ + + + + + ER + L D+ T + AL S+ +
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 142
Query: 419 --HC-DPKIIHRDVKAANILLD 437
HC + ++HRD+K NIL+D
Sbjct: 143 VRHCHNCGVLHRDIKDENILID 164
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 18/142 (12%)
Query: 306 ILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYG 363
+LG GGFG VY G R++D VA+K ++++R S GEL T V + + + + G
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV---SSG 86
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPL-DWPTRKKIALGSARGLSYLHE---- 418
F + +LL + + V + ER + L D+ T + AL S+ +
Sbjct: 87 FSGVI--RLLDWFERPDSFVL--ILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 141
Query: 419 --HC-DPKIIHRDVKAANILLD 437
HC + ++HRD+K NIL+D
Sbjct: 142 VRHCHNCGVLHRDIKDENILID 163
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 18/142 (12%)
Query: 306 ILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYG 363
+LG GGFG VY G R++D VA+K ++++R S GEL T V + + + + G
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV---SSG 87
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPL-DWPTRKKIALGSARGLSYLHE---- 418
F + +LL + + V + ER + L D+ T + AL S+ +
Sbjct: 88 FSGVI--RLLDWFERPDSFVL--ILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 142
Query: 419 --HC-DPKIIHRDVKAANILLD 437
HC + ++HRD+K NIL+D
Sbjct: 143 VRHCHNCGVLHRDIKDENILID 164
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 306 ILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYG 363
+LG GGFG VY G R++D VA+K ++++R S GEL T V + ++ L
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM-------EVVLLKK 102
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPL-DWPTRKKIALGSARGLSYLHE---- 418
+ + + + + + ER + L D+ T + AL S+ +
Sbjct: 103 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 161
Query: 419 --HC-DPKIIHRDVKAANILLD 437
HC + ++HRD+K NIL+D
Sbjct: 162 VRHCHNCGVLHRDIKDENILID 183
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 20/144 (13%)
Query: 306 ILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGE---------LQFQTEVKIISMAVH 355
+LG+GGFG V+ G RL D VA+K + R G L+ K+ + H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPL-DWPTRKKIALGSARGLS 414
++RL + T +LV + A L + + PL + P+R A
Sbjct: 98 PGVIRLLDWFETQEGFMLV---LERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAA--- 151
Query: 415 YLHEHCDPK-IIHRDVKAANILLD 437
+HC + ++HRD+K NIL+D
Sbjct: 152 --IQHCHSRGVVHRDIKDENILID 173
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 15/163 (9%)
Query: 281 LQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRL-KEERTSG 338
LQ + L+E+++ D F ++GRG F +V ++ G++ A+K + K +
Sbjct: 43 LQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKR 102
Query: 339 GELQ-FQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNG---SVASRLRERQSSL 394
GE+ F+ E ++ R + +L+ LV Y G ++ S+ ER +
Sbjct: 103 GEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAE 162
Query: 395 PPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD 437
+ +A+ S L Y +HRD+K NILLD
Sbjct: 163 MARFYLAEIVMAIDSVHRLGY---------VHRDIKPDNILLD 196
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 23/151 (15%)
Query: 301 FSNKNILGRGGFGKVYKGRLADGKLV--AVKRLKEERTSGGELQFQTEVKIISMAVHRNL 358
++ +N +GRG +G+V K + G + A K++ + + +F+ E++I+ H N+
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVD-RFKQEIEIMKSLDHPNI 68
Query: 359 LRLYGFCTTVTEKLLVYPYMTNGSVASRL------RERQSSLPPLDWPTRKKIALGSARG 412
+RLY T+ LV T G + R+ RE ++ +I
Sbjct: 69 IRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA----------RIMKDVLSA 118
Query: 413 LSYLHEHCDPKIIHRDVKAANILLDEDADQS 443
++Y H+ + HRD+K N L D+ S
Sbjct: 119 VAYCHKL---NVAHRDLKPENFLFLTDSPDS 146
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 23/151 (15%)
Query: 301 FSNKNILGRGGFGKVYKGRLADGKLV--AVKRLKEERTSGGELQFQTEVKIISMAVHRNL 358
++ +N +GRG +G+V K + G + A K++ + + +F+ E++I+ H N+
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVD-RFKQEIEIMKSLDHPNI 85
Query: 359 LRLYGFCTTVTEKLLVYPYMTNGSVASRL------RERQSSLPPLDWPTRKKIALGSARG 412
+RLY T+ LV T G + R+ RE ++ +I
Sbjct: 86 IRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA----------RIMKDVLSA 135
Query: 413 LSYLHEHCDPKIIHRDVKAANILLDEDADQS 443
++Y H+ + HRD+K N L D+ S
Sbjct: 136 VAYCHKL---NVAHRDLKPENFLFLTDSPDS 163
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 307 LGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFC 365
+G+G G VY +A G+ VA++++ ++ EL E+ ++ + N++
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-NEILVMRENKNPNIVNYLDSY 87
Query: 366 TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKII 425
E +V Y+ GS+ + E +D + + L +LH + ++I
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVI 139
Query: 426 HRDVKAANILLDEDA 440
HR++K+ NILL D
Sbjct: 140 HRNIKSDNILLGMDG 154
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGE--LQFQTEVKIIS 351
+V + F +LG+G FGKV R A G+ A+K L++E + TE +++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRL-RERQSSLPPLDWPTRKKIALGSA 410
H L L T V Y G + L RER T ++ A
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF--------TEERARFYGA 112
Query: 411 R---GLSYLHEHCDPKIIHRDVKAANILLDEDA 440
L YLH +++RD+K N++LD+D
Sbjct: 113 EIVSALEYLHSR---DVVYRDIKLENLMLDKDG 142
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGE--LQFQTEVKIIS 351
+V + F +LG+G FGKV R A G+ A+K L++E + TE +++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRL-RERQSSLPPLDWPTRKKIALGSA 410
H L L T V Y G + L RER T ++ A
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF--------TEERARFYGA 112
Query: 411 R---GLSYLHEHCDPKIIHRDVKAANILLDEDA 440
L YLH +++RD+K N++LD+D
Sbjct: 113 EIVSALEYLHSR---DVVYRDIKLENLMLDKDG 142
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGE--LQFQTEVKIIS 351
+V + F +LG+G FGKV R A G+ A+K L++E + TE +++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRL-RERQSSLPPLDWPTRKKIALGSA 410
H L L T V Y G + L RER T ++ A
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF--------TEERARFYGA 112
Query: 411 R---GLSYLHEHCDPKIIHRDVKAANILLDEDA 440
L YLH +++RD+K N++LD+D
Sbjct: 113 EIVSALEYLHSR---DVVYRDIKLENLMLDKDG 142
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGE--LQFQTEVKIIS 351
+V + F +LG+G FGKV R A G+ A+K L++E + TE +++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRL-RERQSSLPPLDWPTRKKIALGSA 410
H L L T V Y G + L RER T ++ A
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF--------TEERARFYGA 112
Query: 411 R---GLSYLHEHCDPKIIHRDVKAANILLDEDA 440
L YLH +++RD+K N++LD+D
Sbjct: 113 EIVSALEYLHSR---DVVYRDIKLENLMLDKDG 142
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGE--LQFQTEVKIIS 351
+V + F +LG+G FGKV R A G+ A+K L++E + TE +++
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 65
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRL-RERQSSLPPLDWPTRKKIALGSA 410
H L L T V Y G + L RER T ++ A
Sbjct: 66 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF--------TEERARFYGA 117
Query: 411 R---GLSYLHEHCDPKIIHRDVKAANILLDEDA 440
L YLH +++RD+K N++LD+D
Sbjct: 118 EIVSALEYLHSR---DVVYRDIKLENLMLDKDG 147
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGE--LQFQTEVKIIS 351
+V + F +LG+G FGKV R A G+ A+K L++E + TE +++
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 63
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRL-RERQSSLPPLDWPTRKKIALGSA 410
H L L T V Y G + L RER T ++ A
Sbjct: 64 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF--------TEERARFYGA 115
Query: 411 R---GLSYLHEHCDPKIIHRDVKAANILLDEDA 440
L YLH +++RD+K N++LD+D
Sbjct: 116 EIVSALEYLHSR---DVVYRDIKLENLMLDKDG 145
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 299 DGFSNKNILGRGGFGKVYKGRLADG-KLVAVK---RLKEERTSGGELQFQTEVKIISMAV 354
D + K+++GRG +G VY + K VA+K R+ E+ + E+ I++
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRIL--REITILNRLK 85
Query: 355 HRNLLRLYGFCTTVTEKLLVYP--YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARG 412
++RL+ + E LL + Y+ S L++ + L K I G
Sbjct: 86 SDYIIRLHDL--IIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLG 143
Query: 413 LSYLHEHCDPKIIHRDVKAANILLDED 439
++HE IIHRD+K AN LL++D
Sbjct: 144 EKFIHE---SGIIHRDLKPANCLLNQD 167
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 16/148 (10%)
Query: 301 FSNKNILGRGGFGKVYKG-RLADGKLVAVK--RLKEERTSGGELQ-----FQTEVKII-S 351
+ K+++GRG V + A G AVK + ER S +L+ + E I+
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
+A H +++ L + + LV+ M G + L E+ + L + I
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA----LSEKETRSIMRSLLE 211
Query: 412 GLSYLHEHCDPKIIHRDVKAANILLDED 439
+S+LH + I+HRD+K NILLD++
Sbjct: 212 AVSFLHAN---NIVHRDLKPENILLDDN 236
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGE--LQFQTEVKIIS 351
+V + F +LG+G FGKV R A G+ A+K L++E + TE +++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRL-RERQSSLPPLDWPTRKKIALGSA 410
H L L T V Y G + L RER T ++ A
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF--------TEERARFYGA 112
Query: 411 R---GLSYLHEHCDPKIIHRDVKAANILLDEDA 440
L YLH +++RD+K N++LD+D
Sbjct: 113 EIVSALEYLHSR---DVVYRDIKLENLMLDKDG 142
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 291 LRELQVATDGFSNKNILGRGGFGKVYKGRLADG-KLVAVKRL-KEERTSGGELQ-FQTEV 347
++++++ + F ++GRG FG+V +L + K+ A+K L K E E F+ E
Sbjct: 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREER 125
Query: 348 KIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLD---WPTRKK 404
++ + + L+ LV Y G + + L + + LP +
Sbjct: 126 DVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMV 185
Query: 405 IALGSARGLSYLHEHCDPKIIHRDVKAANILLD 437
IA+ S L Y +HRD+K NIL+D
Sbjct: 186 IAIDSVHQLHY---------VHRDIKPDNILMD 209
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 70/155 (45%), Gaps = 21/155 (13%)
Query: 299 DGFSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGG--------ELQFQT--EV 347
+ + K ILGRG V + K AVK + + T GG EL+ T EV
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKII--DVTGGGSFSAEEVQELREATLKEV 61
Query: 348 KII-SMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIA 406
I+ ++ H N+++L T T LV+ M G + L E+ + L +KI
Sbjct: 62 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT----LSEKETRKIM 117
Query: 407 LGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
+ LH+ I+HRD+K NILLD+D +
Sbjct: 118 RALLEVICALHKL---NIVHRDLKPENILLDDDMN 149
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 400 PTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL 436
P KKI +GL YLH C +IIH D+K NILL
Sbjct: 146 PCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILL 180
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 11/154 (7%)
Query: 290 SLRELQVATDGFSNKNILGRGGFGKVYKGRLADGK----LVAVKRLKEERTSGGELQFQT 345
S R+ ++ + +G G FG V++G + VA+K K + +F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 60
Query: 346 EVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKI 405
E + H ++++L G T ++ T G + S L+ R+ SL D +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSL---DLASLILY 116
Query: 406 ALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
A + L+YL + +HRD+ A N+L+ +
Sbjct: 117 AYQLSTALAYLESK---RFVHRDIAARNVLVSSN 147
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 13/147 (8%)
Query: 299 DGFSNKNILGRGGFGKVY----KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV 354
D + K+++GRG +G VY K + + V R+ E+ + E+ I++
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRIL--REITILNRLK 83
Query: 355 HRNLLRLYGFCTTVTEKLLVYP--YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARG 412
++RLY + + LL + Y+ S L++ + L K I G
Sbjct: 84 SDYIIRLYDLI--IPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLG 141
Query: 413 LSYLHEHCDPKIIHRDVKAANILLDED 439
+++HE IIHRD+K AN LL++D
Sbjct: 142 ENFIHESG---IIHRDLKPANCLLNQD 165
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
Query: 298 TDGFSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHR 356
+ F K++LG G +G V G++VA+K+++ L+ E+KI+ H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 357 NLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYL 416
N++ ++ + + Y+ + + L R S L + + R + L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLH-RVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 417 HEHCDPKIIHRDVKAANILLDEDAD 441
H +IHRD+K +N+L++ + D
Sbjct: 129 H---GSNVIHRDLKPSNLLINSNCD 150
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 68/165 (41%), Gaps = 38/165 (23%)
Query: 301 FSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLL 359
F ++G GGFG+V+K + DGK ++R+K + EVK ++ H N++
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA-----EREVKALAKLDHVNIV 68
Query: 360 RLYGFC--------TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLD---------WPTR 402
Y C T + L Y S S + + ++ W +
Sbjct: 69 H-YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 127
Query: 403 KK-------IAL----GSARGLSYLHEHCDPKIIHRDVKAANILL 436
++ +AL +G+ Y+H K+IHRD+K +NI L
Sbjct: 128 RRGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFL 169
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 11/154 (7%)
Query: 290 SLRELQVATDGFSNKNILGRGGFGKVYKGRLADGK----LVAVKRLKEERTSGGELQFQT 345
S R+ ++ + +G G FG V++G + VA+K K + +F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 346 EVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKI 405
E + H ++++L G T ++ T G + S L+ R+ SL D +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSL---DLASLILY 116
Query: 406 ALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
A + L+YL + +HRD+ A N+L+ +
Sbjct: 117 AYQLSTALAYLESK---RFVHRDIAARNVLVSSN 147
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 400 PTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL 436
P KKI +GL YLH C +IIH D+K NILL
Sbjct: 130 PCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILL 164
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 11/154 (7%)
Query: 290 SLRELQVATDGFSNKNILGRGGFGKVYKGRLADGK----LVAVKRLKEERTSGGELQFQT 345
S R+ ++ + +G G FG V++G + VA+K K + +F
Sbjct: 29 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 88
Query: 346 EVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKI 405
E + H ++++L G T ++ T G + S L+ R+ SL D +
Sbjct: 89 EALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSL---DLASLILY 144
Query: 406 ALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
A + L+YL + +HRD+ A N+L+ +
Sbjct: 145 AYQLSTALAYLESK---RFVHRDIAARNVLVSSN 175
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 12/145 (8%)
Query: 298 TDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEE--RTSGGELQFQTEVKIISMAV 354
+D + ILG GG +V+ R L + VAVK L+ + R L+F+ E + +
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 355 HRNLLRLY--GFCTTVTEKLLVYPYMTNGSV-ASRLRERQSSLPPLDWPTRKKIALGSAR 411
H ++ +Y G T L PY+ V LR+ + P+ ++ + +
Sbjct: 88 HPAIVAVYDTGEAETPAGPL---PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 144
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
L++ H++ IIHRDVK ANI++
Sbjct: 145 ALNFSHQN---GIIHRDVKPANIMI 166
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Query: 307 LGRGGFGKVYKGRLADG-KLVAVKRLK-EERTSGGELQFQTEVKIISMAVHRNLLRLYGF 364
+G G +G V+K + + ++VA+KR++ ++ G E+ ++ H+N++RL+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 365 CTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI 424
+ + LV+ + + + L P K +GL + H +
Sbjct: 70 LHSDKKLTLVFEF-CDQDLKKYFDSCNGDLDP---EIVKSFLFQLLKGLGFCHSR---NV 122
Query: 425 IHRDVKAANILLDEDAD 441
+HRD+K N+L++ + +
Sbjct: 123 LHRDLKPQNLLINRNGE 139
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 11/154 (7%)
Query: 290 SLRELQVATDGFSNKNILGRGGFGKVYKGRLADGK----LVAVKRLKEERTSGGELQFQT 345
S R+ ++ + +G G FG V++G + VA+K K + +F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 346 EVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKI 405
E + H ++++L G T ++ T G + S L+ R+ SL D +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSL---DLASLILY 116
Query: 406 ALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
A + L+YL + +HRD+ A N+L+ +
Sbjct: 117 AYQLSTALAYLESK---RFVHRDIAARNVLVSSN 147
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
Query: 298 TDGFSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHR 356
+ F K++LG G +G V G++VA+K+++ L+ E+KI+ H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 357 NLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYL 416
N++ ++ + + Y+ + + L R S L + + R + L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLH-RVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 417 HEHCDPKIIHRDVKAANILLDEDAD 441
H +IHRD+K +N+L++ + D
Sbjct: 129 H---GSNVIHRDLKPSNLLINSNCD 150
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
Query: 298 TDGFSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHR 356
+ F K++LG G +G V G++VA+K+++ L+ E+KI+ H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 357 NLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYL 416
N++ ++ + + Y+ + + L R S L + + R + L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLH-RVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 417 HEHCDPKIIHRDVKAANILLDEDAD 441
H +IHRD+K +N+L++ + D
Sbjct: 129 H---GSNVIHRDLKPSNLLINSNCD 150
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Query: 307 LGRGGFGKVYKGRLADG-KLVAVKRLK-EERTSGGELQFQTEVKIISMAVHRNLLRLYGF 364
+G G +G V+K + + ++VA+KR++ ++ G E+ ++ H+N++RL+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 365 CTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI 424
+ + LV+ + + + L P K +GL + H +
Sbjct: 70 LHSDKKLTLVFEF-CDQDLKKYFDSCNGDLDP---EIVKSFLFQLLKGLGFCHSR---NV 122
Query: 425 IHRDVKAANILLDEDAD 441
+HRD+K N+L++ + +
Sbjct: 123 LHRDLKPQNLLINRNGE 139
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 21/153 (13%)
Query: 299 DGFSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGG--------ELQFQT--EV 347
+ + K ILGRG V + K AVK + + T GG EL+ T EV
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKII--DVTGGGSFSAEEVQELREATLKEV 74
Query: 348 KII-SMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIA 406
I+ ++ H N+++L T T LV+ M G + L E+ + L +KI
Sbjct: 75 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT----LSEKETRKIM 130
Query: 407 LGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
+ LH+ I+HRD+K NILLD+D
Sbjct: 131 RALLEVICALHKL---NIVHRDLKPENILLDDD 160
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 24/154 (15%)
Query: 296 VATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSG--GELQFQTEVKIISM 352
V + F +LG+GGFG+V ++ A GK+ A K+L+++R GE E +I+
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 353 AVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRER-QSSLPPLDWPTRKKIALGSAR 411
R ++ L T LV M G + + Q+ P AR
Sbjct: 241 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP-------------EAR 287
Query: 412 GLSYLHEHC-------DPKIIHRDVKAANILLDE 438
+ Y E C +I++RD+K NILLD+
Sbjct: 288 AVFYAAEICCGLEDLHRERIVYRDLKPENILLDD 321
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 24/154 (15%)
Query: 296 VATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSG--GELQFQTEVKIISM 352
V + F +LG+GGFG+V ++ A GK+ A K+L+++R GE E +I+
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 353 AVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRER-QSSLPPLDWPTRKKIALGSAR 411
R ++ L T LV M G + + Q+ P AR
Sbjct: 241 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP-------------EAR 287
Query: 412 GLSYLHEHC-------DPKIIHRDVKAANILLDE 438
+ Y E C +I++RD+K NILLD+
Sbjct: 288 AVFYAAEICCGLEDLHRERIVYRDLKPENILLDD 321
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 21/153 (13%)
Query: 299 DGFSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGG--------ELQFQT--EV 347
+ + K ILGRG V + K AVK + + T GG EL+ T EV
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKII--DVTGGGSFSAEEVQELREATLKEV 74
Query: 348 KII-SMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIA 406
I+ ++ H N+++L T T LV+ M G + L E+ + L +KI
Sbjct: 75 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT----LSEKETRKIM 130
Query: 407 LGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
+ LH+ I+HRD+K NILLD+D
Sbjct: 131 RALLEVICALHKL---NIVHRDLKPENILLDDD 160
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 12/145 (8%)
Query: 298 TDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEE--RTSGGELQFQTEVKIISMAV 354
+D + ILG GG +V+ R L + VAVK L+ + R L+F+ E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 355 HRNLLRLY--GFCTTVTEKLLVYPYMTNGSV-ASRLRERQSSLPPLDWPTRKKIALGSAR 411
H ++ +Y G T L PY+ V LR+ + P+ ++ + +
Sbjct: 71 HPAIVAVYATGEAETPAGPL---PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
L++ H++ IIHRDVK ANI++
Sbjct: 128 ALNFSHQN---GIIHRDVKPANIMI 149
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 11/154 (7%)
Query: 290 SLRELQVATDGFSNKNILGRGGFGKVYKGRLADGK----LVAVKRLKEERTSGGELQFQT 345
S R+ ++ + +G G FG V++G + VA+K K + +F
Sbjct: 6 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 65
Query: 346 EVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKI 405
E + H ++++L G T ++ T G + S L+ R+ SL D +
Sbjct: 66 EALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSL---DLASLILY 121
Query: 406 ALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
A + L+YL + +HRD+ A N+L+ +
Sbjct: 122 AYQLSTALAYLESK---RFVHRDIAARNVLVSSN 152
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 12/145 (8%)
Query: 298 TDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEE--RTSGGELQFQTEVKIISMAV 354
+D + ILG GG +V+ R L + VAVK L+ + R L+F+ E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 355 HRNLLRLY--GFCTTVTEKLLVYPYMTNGSV-ASRLRERQSSLPPLDWPTRKKIALGSAR 411
H ++ +Y G T L PY+ V LR+ + P+ ++ + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPL---PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
L++ H++ IIHRDVK ANI++
Sbjct: 128 ALNFSHQN---GIIHRDVKPANIMI 149
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 35.4 bits (80), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 11/154 (7%)
Query: 290 SLRELQVATDGFSNKNILGRGGFGKVYKGRLADGK----LVAVKRLKEERTSGGELQFQT 345
S R+ ++ + +G G FG V++G + VA+K K + +F
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 62
Query: 346 EVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKI 405
E + H ++++L G T ++ T G + S L+ R+ SL D +
Sbjct: 63 EALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSL---DLASLILY 118
Query: 406 ALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
A + L+YL + +HRD+ A N+L+ +
Sbjct: 119 AYQLSTALAYLESK---RFVHRDIAARNVLVSSN 149
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 35.0 bits (79), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 11/154 (7%)
Query: 290 SLRELQVATDGFSNKNILGRGGFGKVYKGRLADGK----LVAVKRLKEERTSGGELQFQT 345
S R+ ++ + +G G FG V++G + VA+K K + +F
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 63
Query: 346 EVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKI 405
E + H ++++L G T ++ T G + S L+ R+ SL D +
Sbjct: 64 EALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSL---DLASLILY 119
Query: 406 ALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
A + L+YL + +HRD+ A N+L+ +
Sbjct: 120 AYQLSTALAYLESK---RFVHRDIAARNVLVSSN 150
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.0 bits (79), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 11/151 (7%)
Query: 290 SLRELQVATDGFSNKNILGRGGFGKVYKGRLADGK----LVAVKRLKEERTSGGELQFQT 345
S R+ ++ + +G G FG V++G + VA+K K + +F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 346 EVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKI 405
E + H ++++L G T ++ T G + S L+ R+ SL D +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSL---DLASLILY 116
Query: 406 ALGSARGLSYLHEHCDPKIIHRDVKAANILL 436
A + L+YL + +HRD+ A N+L+
Sbjct: 117 AYQLSTALAYLESK---RFVHRDIAARNVLV 144
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 35.0 bits (79), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 307 LGRGGFGKVYKG--RLADGKL-VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYG 363
LG G FG V +G R+ ++ VA+K LK+ + E +I+ + ++RL G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK 423
C E L++ M G + + P+ ++ + G+ YL E
Sbjct: 78 VCQ--AEALMLVMEMAGGGPLHKFLVGKREEIPVS--NVAELLHQVSMGMKYLEEK---N 130
Query: 424 IIHRDVKAANILL 436
+HRD+ A N+LL
Sbjct: 131 FVHRDLAARNVLL 143
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 35.0 bits (79), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 17/155 (10%)
Query: 295 QVATDGFSNKNILGRGGFGKVYKGRLADG----KLVAVKRLKEE---RTSGGELQFQTEV 347
+V + F +LG G +GKV+ R G KL A+K LK+ + + +TE
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 109
Query: 348 KIISMAVHRNLLRLYGFCTTVTEKL-LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIA 406
+++ L + KL L+ Y+ G + + L +R+ +I
Sbjct: 110 QVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTE-----HEVQIY 164
Query: 407 LGS-ARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440
+G L +LH+ II+RD+K NILLD +
Sbjct: 165 VGEIVLALEHLHK---LGIIYRDIKLENILLDSNG 196
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 35.0 bits (79), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 295 QVATDGFSNKNILGRGGFGKVY-KGRLADGKLVAVKRLKEERTSGGE--LQFQTEVKIIS 351
+V + F +LG+G FGKV A G+ A+K LK+E + TE +++
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 63
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRL-RERQSSLPPLDWPTRKKIALGSA 410
+ H L L T V Y G + L RER S + + ++
Sbjct: 64 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVS---- 119
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDA 440
L YLH + +++RD+K N++LD+D
Sbjct: 120 -ALDYLH--SEKNVVYRDLKLENLMLDKDG 146
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 35.0 bits (79), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 295 QVATDGFSNKNILGRGGFGKVY-KGRLADGKLVAVKRLKEERTSGGE--LQFQTEVKIIS 351
+V + F +LG+G FGKV A G+ A+K LK+E + TE +++
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 64
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRL-RERQSSLPPLDWPTRKKIALGSA 410
+ H L L T V Y G + L RER S + + ++
Sbjct: 65 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVS---- 120
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDA 440
L YLH + +++RD+K N++LD+D
Sbjct: 121 -ALDYLH--SEKNVVYRDLKLENLMLDKDG 147
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 10/146 (6%)
Query: 296 VATDGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEER-TSGGELQ-FQTEVKIISM 352
V D F +G+G FGKV + D K+ A+K + +++ E++ E++I+
Sbjct: 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 353 AVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARG 412
H L+ L+ + +V + G + L++ T K
Sbjct: 72 LEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH----FKEETVKLFICELVMA 127
Query: 413 LSYLHEHCDPKIIHRDVKAANILLDE 438
L YL +IIHRD+K NILLDE
Sbjct: 128 LDYLQNQ---RIIHRDMKPDNILLDE 150
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 295 QVATDGFSNKNILGRGGFGKVY-KGRLADGKLVAVKRLKEERTSGGE--LQFQTEVKIIS 351
+V + F +LG+G FGKV A G+ A+K LK+E + TE +++
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRL-RERQSSLPPLDWPTRKKIALGSA 410
+ H L L T V Y G + L RER S + + ++
Sbjct: 66 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVS---- 121
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDA 440
L YLH + +++RD+K N++LD+D
Sbjct: 122 -ALDYLH--SEKNVVYRDLKLENLMLDKDG 148
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 305 NILGRGGFGKVYK----GRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
++LG G +GKV + L + +K+ K R GE + E++++ H+N+++
Sbjct: 11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSA--RGLSYLHE 418
L ++ + YM ++E S+P +P + GL YLH
Sbjct: 71 LVDVLYNEEKQKM---YMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHS 127
Query: 419 HCDPKIIHRDVKAANILL 436
I+H+D+K N+LL
Sbjct: 128 Q---GIVHKDIKPGNLLL 142
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIIS-MAVHRN-LLRLYG 363
+G GG KV++ ++ A+K + E L ++ E+ ++ + H + ++RLY
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 364 FCTTVTEKLLVYPYMTNGSVA--SRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCD 421
+ +T++ +Y M G++ S L++++S P W RK + +H+H
Sbjct: 96 Y--EITDQY-IYMVMECGNIDLNSWLKKKKSIDP---W-ERKSYWKNMLEAVHTIHQHG- 147
Query: 422 PKIIHRDVKAANILL 436
I+H D+K AN L+
Sbjct: 148 --IVHSDLKPANFLI 160
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIIS-MAVHRN-LLRLYG 363
+G GG KV++ ++ A+K + E L ++ E+ ++ + H + ++RLY
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 364 FCTTVTEKLLVYPYMTNGSVA--SRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCD 421
+ +T++ +Y M G++ S L++++S P W RK + +H+H
Sbjct: 96 Y--EITDQY-IYMVMECGNIDLNSWLKKKKSIDP---W-ERKSYWKNMLEAVHTIHQHG- 147
Query: 422 PKIIHRDVKAANILL 436
I+H D+K AN L+
Sbjct: 148 --IVHSDLKPANFLI 160
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIIS-MAVHRN-LLRLYG 363
+G GG KV++ ++ A+K + E L ++ E+ ++ + H + ++RLY
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 364 FCTTVTEKLLVYPYMTNGSVA--SRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCD 421
+ +T++ +Y M G++ S L++++S P W RK + +H+H
Sbjct: 80 Y--EITDQY-IYMVMECGNIDLNSWLKKKKSIDP---W-ERKSYWKNMLEAVHTIHQH-- 130
Query: 422 PKIIHRDVKAANILL 436
I+H D+K AN L+
Sbjct: 131 -GIVHSDLKPANFLI 144
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 65/153 (42%), Gaps = 15/153 (9%)
Query: 291 LRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRL--KEERTSGGELQ-FQTEV 347
++E+Q+ + F ++GRG FG+V ++ + + + ++ K E E F+ E
Sbjct: 66 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREER 125
Query: 348 KIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLP---PLDWPTRKK 404
++ + + L+ LV Y G + + L + + LP +
Sbjct: 126 DVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMV 185
Query: 405 IALGSARGLSYLHEHCDPKIIHRDVKAANILLD 437
+A+ S L Y +HRD+K N+LLD
Sbjct: 186 LAIDSIHQLHY---------VHRDIKPDNVLLD 209
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 68/165 (41%), Gaps = 20/165 (12%)
Query: 291 LRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQT----- 345
+ EL ++ + + G +G V G ++G VA+KR+ + G + +
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 346 -----EVKIISMAVHRNLLRL----YGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP 396
E+++++ H N+L L F KL + + +A + +++ + P
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 397 LDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
+ GL LHE ++HRD+ NILL ++ D
Sbjct: 134 QHI---QYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNND 172
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 9/161 (5%)
Query: 282 QLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGE 340
Q+G+ F + +D + K LG+G F V + G A K + ++ S +
Sbjct: 12 QMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD 71
Query: 341 LQ-FQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDW 399
Q + E +I H N++RL+ + LV+ +T G + + R+
Sbjct: 72 FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS 131
Query: 400 PTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440
++I ++Y H + I+HR++K N+LL A
Sbjct: 132 HCIQQI----LESIAYCHSN---GIVHRNLKPENLLLASKA 165
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 14/142 (9%)
Query: 305 NILGRGGFGKVYKGRLADG----KLVAVKRLKEERTSGGE-LQFQTEVKIISMAVHRNLL 359
+LG+G FGKV+ + G +L A+K LK+ + ++ + E I+ H ++
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS-ARGLSYLHE 418
+L+ T + L+ ++ G + +RL ++ D K L A L +LH
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEED----VKFYLAELALALDHLHS 144
Query: 419 HCDPKIIHRDVKAANILLDEDA 440
II+RD+K NILLDE+
Sbjct: 145 LG---IIYRDLKPENILLDEEG 163
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 14/142 (9%)
Query: 305 NILGRGGFGKVYKGRLADG----KLVAVKRLKEERTSGGE-LQFQTEVKIISMAVHRNLL 359
+LG+G FGKV+ + G +L A+K LK+ + ++ + E I+ H ++
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS-ARGLSYLHE 418
+L+ T + L+ ++ G + +RL ++ D K L A L +LH
Sbjct: 91 KLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEED----VKFYLAELALALDHLHS 145
Query: 419 HCDPKIIHRDVKAANILLDEDA 440
II+RD+K NILLDE+
Sbjct: 146 LG---IIYRDLKPENILLDEEG 164
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 65/153 (42%), Gaps = 15/153 (9%)
Query: 291 LRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRL--KEERTSGGELQ-FQTEV 347
++E+Q+ + F ++GRG FG+V ++ + + + ++ K E E F+ E
Sbjct: 82 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREER 141
Query: 348 KIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLP---PLDWPTRKK 404
++ + + L+ LV Y G + + L + + LP +
Sbjct: 142 DVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMV 201
Query: 405 IALGSARGLSYLHEHCDPKIIHRDVKAANILLD 437
+A+ S L Y +HRD+K N+LLD
Sbjct: 202 LAIDSIHQLHY---------VHRDIKPDNVLLD 225
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 14/142 (9%)
Query: 305 NILGRGGFGKVYKGRLADG----KLVAVKRLKEERTSGGE-LQFQTEVKIISMAVHRNLL 359
+LG+G FGKV+ + G +L A+K LK+ + ++ + E I+ H ++
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS-ARGLSYLHE 418
+L+ T + L+ ++ G + +RL ++ D K L A L +LH
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEED----VKFYLAELALALDHLHS 144
Query: 419 HCDPKIIHRDVKAANILLDEDA 440
II+RD+K NILLDE+
Sbjct: 145 LG---IIYRDLKPENILLDEEG 163
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 68/165 (41%), Gaps = 20/165 (12%)
Query: 291 LRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQT----- 345
+ EL ++ + + G +G V G ++G VA+KR+ + G + +
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 346 -----EVKIISMAVHRNLLRL----YGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPP 396
E+++++ H N+L L F KL + + +A + +++ + P
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 397 LDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
+ GL LHE ++HRD+ NILL ++ D
Sbjct: 134 QHI---QYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNND 172
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIIS-MAVHRN-LLRLYG 363
+G GG KV++ ++ A+K + E L ++ E+ ++ + H + ++RLY
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 364 FCTTVTEKLLVYPYMTNGSVA--SRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCD 421
+ +T++ +Y M G++ S L++++S P W RK + +H+H
Sbjct: 76 Y--EITDQY-IYMVMECGNIDLNSWLKKKKSIDP---W-ERKSYWKNMLEAVHTIHQH-- 126
Query: 422 PKIIHRDVKAANILL 436
I+H D+K AN L+
Sbjct: 127 -GIVHSDLKPANFLI 140
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 13/151 (8%)
Query: 295 QVATDGFSNKNILGRGGFGKVY-KGRLADGKLVAVKRLKEERTSGGE--LQFQTEVKIIS 351
+V + F +LG+G FGKV A G+ A+K LK+E + TE +++
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 203
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRL-RERQSSLPPLDWPTRKKIALGS- 409
+ H L L T V Y G + L RER S R +
Sbjct: 204 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS------EDRARFYGAEI 257
Query: 410 ARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440
L YLH + +++RD+K N++LD+D
Sbjct: 258 VSALDYLH--SEKNVVYRDLKLENLMLDKDG 286
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIIS-MAVHRN-LLRLYG 363
+G GG KV++ ++ A+K + E L ++ E+ ++ + H + ++RLY
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 364 FCTTVTEKLLVYPYMTNGSVA--SRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCD 421
+ +T++ +Y M G++ S L++++S P W RK + +H+H
Sbjct: 124 Y--EITDQY-IYMVMECGNIDLNSWLKKKKSIDP---W-ERKSYWKNMLEAVHTIHQHG- 175
Query: 422 PKIIHRDVKAANILL 436
I+H D+K AN L+
Sbjct: 176 --IVHSDLKPANFLI 188
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 11/151 (7%)
Query: 290 SLRELQVATDGFSNKNILGRGGFGKVYKGRLADGK----LVAVKRLKEERTSGGELQFQT 345
S R+ ++ + +G G FG V++G + VA+K K + +F
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 346 EVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKI 405
E + H ++++L G T ++ T G + S L+ R+ SL D +
Sbjct: 441 EALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSL---DLASLILY 496
Query: 406 ALGSARGLSYLHEHCDPKIIHRDVKAANILL 436
A + L+YL + +HRD+ A N+L+
Sbjct: 497 AYQLSTALAYLESK---RFVHRDIAARNVLV 524
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 11/151 (7%)
Query: 290 SLRELQVATDGFSNKNILGRGGFGKVYKGRLADGK----LVAVKRLKEERTSGGELQFQT 345
S R+ ++ + +G G FG V++G + VA+K K + +F
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 346 EVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKI 405
E + H ++++L G T ++ T G + S L+ R+ SL D +
Sbjct: 441 EALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSL---DLASLILY 496
Query: 406 ALGSARGLSYLHEHCDPKIIHRDVKAANILL 436
A + L+YL + +HRD+ A N+L+
Sbjct: 497 AYQLSTALAYLESK---RFVHRDIAARNVLV 524
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 13/151 (8%)
Query: 295 QVATDGFSNKNILGRGGFGKVY-KGRLADGKLVAVKRLKEERTSGGE--LQFQTEVKIIS 351
+V + F +LG+G FGKV A G+ A+K LK+E + TE +++
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 206
Query: 352 MAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRL-RERQSSLPPLDWPTRKKIALGS- 409
+ H L L T V Y G + L RER S R +
Sbjct: 207 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS------EDRARFYGAEI 260
Query: 410 ARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440
L YLH + +++RD+K N++LD+D
Sbjct: 261 VSALDYLH--SEKNVVYRDLKLENLMLDKDG 289
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIIS-MAVHRN-LLRLYG 363
+G GG KV++ ++ A+K + E L ++ E+ ++ + H + ++RLY
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 364 FCTTVTEKLLVYPYMTNGSVA--SRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCD 421
+ +T++ +Y M G++ S L++++S P W RK + +H+H
Sbjct: 77 Y--EITDQY-IYMVMECGNIDLNSWLKKKKSIDP---W-ERKSYWKNMLEAVHTIHQHG- 128
Query: 422 PKIIHRDVKAANILL 436
I+H D+K AN L+
Sbjct: 129 --IVHSDLKPANFLI 141
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 8/147 (5%)
Query: 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKE--ERTSGGELQFQTEVKIISMAVH 355
D + +G G +G V R G+ VA+K++ + + + + E+KI+ H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKH 112
Query: 356 RNLLRLYGFC-TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
N++ + TV Y+ + S L + S PL + RGL
Sbjct: 113 DNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLK 172
Query: 415 YLHEHCDPKIIHRDVKAANILLDEDAD 441
Y+H ++IHRD+K +N+L++E+ +
Sbjct: 173 YMH---SAQVIHRDLKPSNLLVNENCE 196
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 26/153 (16%)
Query: 301 FSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERT------SGGEL-QFQTEVKIISM 352
+S + LG G FG V+ + K V VK +K+E+ +L + E+ I+S
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 353 AVHRNLLRL------YGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIA 406
H N++++ GF V EK +G +R P LD P I
Sbjct: 86 VEHANIIKVLDIFENQGFFQLVMEK------HGSGLDLFAFIDRH---PRLDEPLASYIF 136
Query: 407 LGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439
+ YL IIHRD+K NI++ ED
Sbjct: 137 RQLVSAVGYLRLK---DIIHRDIKDENIVIAED 166
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 9/136 (6%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYG-FC 365
+GRG +G VYK + DGK LK+ +G + E+ ++ H N++ L F
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 366 TTVTEKL-LVYPYMTNG--SVASRLRERQSSLPPLDWP--TRKKIALGSARGLSYLHEHC 420
+ K+ L++ Y + + R +++ P+ P K + G+ YLH +
Sbjct: 89 SHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW 148
Query: 421 DPKIIHRDVKAANILL 436
++HRD+K ANIL+
Sbjct: 149 ---VLHRDLKPANILV 161
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 11/134 (8%)
Query: 307 LGRGGFGKVYKGRLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLY 362
+G G FG V++G + VA+K K + +F E + H ++++L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 363 GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422
G T ++ T G + S L+ R+ SL D + A + L+YL
Sbjct: 75 GVITE-NPVWIIMELCTLGELRSFLQVRKYSL---DLASLILYAYQLSTALAYLESK--- 127
Query: 423 KIIHRDVKAANILL 436
+ +HRD+ A N+L+
Sbjct: 128 RFVHRDIAARNVLV 141
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 11/139 (7%)
Query: 306 ILGRGGFGKVY-KGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRN---LLRL 361
+LG+G FGKV R +L A+K LK++ + T V+ +A+ L +L
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 362 YGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCD 421
+ TV V Y+ G + +++ P +I++G L +LH+
Sbjct: 86 HSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIG----LFFLHKR-- 139
Query: 422 PKIIHRDVKAANILLDEDA 440
II+RD+K N++LD +
Sbjct: 140 -GIIYRDLKLDNVMLDSEG 157
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 28/150 (18%)
Query: 298 TDGFSNKNILGRGGFG--KVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVH 355
+D + +G G FG ++ + +L +LVAVK + ER + + Q E+ H
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLT-KELVAVKYI--ERGAAIDENVQREIINHRSLRH 75
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR---- 411
N++R T T ++ Y + G + R+ + + AR
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYASGGELYERIC------------NAGRFSEDEARFFFQ 123
Query: 412 ----GLSYLHEHCDPKIIHRDVKAANILLD 437
G+SY H +I HRD+K N LLD
Sbjct: 124 QLLSGVSYCHSM---QICHRDLKLENTLLD 150
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 303 NKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRL 361
++ ILG G G V G+ VAVKR+ + + E+K+++ + H N++R
Sbjct: 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALM----EIKLLTESDDHPNVIRY 74
Query: 362 YGFCTTVTEKLL----------VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
Y C+ T++ L + + + +V+ + Q P+ + A
Sbjct: 75 Y--CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI------SLLRQIAS 126
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
G+++LH KIIHRD+K NIL+
Sbjct: 127 GVAHLHSL---KIIHRDLKPQNILV 148
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 303 NKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRL 361
++ ILG G G V G+ VAVKR+ + + E+K+++ + H N++R
Sbjct: 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALM----EIKLLTESDDHPNVIRY 74
Query: 362 YGFCTTVTEKLL----------VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
Y C+ T++ L + + + +V+ + Q P+ + A
Sbjct: 75 Y--CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI------SLLRQIAS 126
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
G+++LH KIIHRD+K NIL+
Sbjct: 127 GVAHLHSL---KIIHRDLKPQNILV 148
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIIS-MAVHRN-LLRLYG 363
+G GG KV++ ++ A+K + E L ++ E+ ++ + H + ++RLY
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 364 FCTTVTEKLLVYPYMTNGSVA--SRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCD 421
+ +T++ +Y M G++ S L++++S P W RK + +H+H
Sbjct: 124 Y--EITDQY-IYMVMECGNIDLNSWLKKKKSIDP---W-ERKSYWKNMLEAVHTIHQHG- 175
Query: 422 PKIIHRDVKAANILL 436
I+H D+K AN L+
Sbjct: 176 --IVHSDLKPANFLI 188
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 307 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIIS-MAVHRN-LLRLYG 363
+G GG KV++ ++ A+K + E L ++ E+ ++ + H + ++RLY
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 364 FCTTVTEKLLVYPYMTNGSVA--SRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCD 421
+ +T++ +Y M G++ S L++++S P W RK + +H+H
Sbjct: 124 Y--EITDQY-IYMVMECGNIDLNSWLKKKKSIDP---W-ERKSYWKNMLEAVHTIHQHG- 175
Query: 422 PKIIHRDVKAANILL 436
I+H D+K AN L+
Sbjct: 176 --IVHSDLKPANFLI 188
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 8/147 (5%)
Query: 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKE--ERTSGGELQFQTEVKIISMAVH 355
D + +G G +G V R G+ VA+K++ + + + + E+KI+ H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKH 113
Query: 356 RNLLRLYGFC-TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
N++ + TV Y+ + S L + S PL + RGL
Sbjct: 114 DNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLK 173
Query: 415 YLHEHCDPKIIHRDVKAANILLDEDAD 441
Y+H ++IHRD+K +N+L++E+ +
Sbjct: 174 YMHSA---QVIHRDLKPSNLLVNENCE 197
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 112 PSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNN 153
P A +L +L +L L++N + + LA L+ L+YLRLN+N
Sbjct: 193 PHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 234
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 112 PSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNN 153
P A +L +L +L L++N + + LA L+ L+YLRLN+N
Sbjct: 194 PHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 9/141 (6%)
Query: 298 TDGFSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVH 355
TD + LG+G F V + + + A K + ++ S + Q + E +I + H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415
N++RL+ + LV+ +T G + + R+ +I +++
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQI----LESVNH 145
Query: 416 LHEHCDPKIIHRDVKAANILL 436
+H+H I+HRD+K N+LL
Sbjct: 146 IHQH---DIVHRDLKPENLLL 163
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 19/155 (12%)
Query: 291 LRELQVATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK--EERTSGGELQFQTEV 347
+R+L++ + + ++GRG FG+V R + K+ A+K L E F E
Sbjct: 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 120
Query: 348 KIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWP----TRK 403
I++ A +++L+ +V YM G + + + P W
Sbjct: 121 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV---PEKWARFYTAEV 177
Query: 404 KIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE 438
+AL + + + IHRDVK N+LLD+
Sbjct: 178 VLALDAIHSMGF---------IHRDVKPDNMLLDK 203
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 19/155 (12%)
Query: 291 LRELQVATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLK--EERTSGGELQFQTEV 347
+R+L++ + + ++GRG FG+V R + K+ A+K L E F E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 348 KIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWP----TRK 403
I++ A +++L+ +V YM G + + + P W
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV---PEKWARFYTAEV 182
Query: 404 KIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE 438
+AL + + + IHRDVK N+LLD+
Sbjct: 183 VLALDAIHSMGF---------IHRDVKPDNMLLDK 208
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 19/155 (12%)
Query: 291 LRELQVATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLK--EERTSGGELQFQTEV 347
+R+L++ + + ++GRG FG+V R + K+ A+K L E F E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 348 KIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWP----TRK 403
I++ A +++L+ +V YM G + + + P W
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV---PEKWARFYTAEV 182
Query: 404 KIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE 438
+AL + + + IHRDVK N+LLD+
Sbjct: 183 VLALDAIHSMGF---------IHRDVKPDNMLLDK 208
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 303 NKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRL 361
++ ILG G G V G+ VAVKR+ + + E+K+++ + H N++R
Sbjct: 37 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALM----EIKLLTESDDHPNVIRY 92
Query: 362 YGFCTTVTEKLL----------VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
Y C+ T++ L + + + +V+ + Q P+ + A
Sbjct: 93 Y--CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI------SLLRQIAS 144
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
G+++LH KIIHRD+K NIL+
Sbjct: 145 GVAHLHSL---KIIHRDLKPQNILV 166
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED++
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSE 169
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 307 LGRGGFGKVYKG--RLADGKL-VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYG 363
LG G FG V +G R+ ++ VA+K LK+ + E +I+ + ++RL G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK 423
C E L++ M G + + P+ ++ + G+ YL E
Sbjct: 404 VCQ--AEALMLVMEMAGGGPLHKFLVGKREEIPVS--NVAELLHQVSMGMKYLEEK---N 456
Query: 424 IIHRDVKAANILL 436
+HR++ A N+LL
Sbjct: 457 FVHRNLAARNVLL 469
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED++
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSE 169
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 303 NKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRL 361
++ ILG G G V G+ VAVKR+ + + E+K+++ + H N++R
Sbjct: 37 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALM----EIKLLTESDDHPNVIRY 92
Query: 362 YGFCTTVTEKLL----------VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411
Y C+ T++ L + + + +V+ + Q P+ + A
Sbjct: 93 Y--CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI------SLLRQIAS 144
Query: 412 GLSYLHEHCDPKIIHRDVKAANILL 436
G+++LH KIIHRD+K NIL+
Sbjct: 145 GVAHLHSL---KIIHRDLKPQNILV 166
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILL 436
+GL YLH C KIIH D+K NIL+
Sbjct: 151 QGLDYLHSKC--KIIHTDIKPENILM 174
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 11/142 (7%)
Query: 298 TDGFSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVH 355
TD + LG+G F V + ++ G+ A K + ++ S + Q + E +I + H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415
N++RL+ + LV+ +T G + + R+ + A + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY--------YSEADASHCIQQILE 114
Query: 416 LHEHCD-PKIIHRDVKAANILL 436
HC I+HRD+K N+LL
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLL 136
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 9/141 (6%)
Query: 298 TDGFSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVH 355
TD + +G+G F V + +L G A K + ++ S + Q + E +I + H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415
N++RL+ + LV+ +T G + + R+ ++I +
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQIL------EAV 116
Query: 416 LHEHCDPKIIHRDVKAANILL 436
LH H ++HRD+K N+LL
Sbjct: 117 LHCH-QMGVVHRDLKPENLLL 136
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 11/142 (7%)
Query: 298 TDGFSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVH 355
TD + LG+G F V + ++ G+ A K + ++ S + Q + E +I + H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415
N++RL+ + LV+ +T G + + R+ + A + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY--------YSEADASHCIQQILE 114
Query: 416 LHEHCD-PKIIHRDVKAANILL 436
HC I+HRD+K N+LL
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLL 136
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED++
Sbjct: 138 RGLKYIHS---ADIIHRDLKPSNLAVNEDSE 165
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED++
Sbjct: 142 RGLKYIHS---ADIIHRDLKPSNLAVNEDSE 169
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED++
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDSE 163
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 9/145 (6%)
Query: 298 TDGFSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVH 355
+D + K LG+G F V + G A K + ++ S + Q + E +I H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415
N++RL+ + LV+ +T G + + R+ ++I ++Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI----LESIAY 120
Query: 416 LHEHCDPKIIHRDVKAANILLDEDA 440
H + I+HR++K N+LL A
Sbjct: 121 CHSN---GIVHRNLKPENLLLASKA 142
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 134 RGLKYIH---SAGIIHRDLKPSNVAVNEDCE 161
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 9/145 (6%)
Query: 298 TDGFSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVH 355
+D + K LG+G F V + G A K + ++ S + Q + E +I H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415
N++RL+ + LV+ +T G + + R+ ++I ++Y
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI----LESIAY 119
Query: 416 LHEHCDPKIIHRDVKAANILLDEDA 440
H + I+HR++K N+LL A
Sbjct: 120 CHSN---GIVHRNLKPENLLLASKA 141
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 9/145 (6%)
Query: 298 TDGFSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVH 355
+D + K LG+G F V + G A K + ++ S + Q + E +I H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415
N++RL+ + LV+ +T G + + R+ ++I ++Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI----LESIAY 120
Query: 416 LHEHCDPKIIHRDVKAANILLDEDA 440
H + I+HR++K N+LL A
Sbjct: 121 CHSN---GIVHRNLKPENLLLASKA 142
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 165 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 192
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 31.6 bits (70), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 148 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 175
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 148 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 175
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 148 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 175
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 31.6 bits (70), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 159 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 186
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 31.6 bits (70), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 147 RGLKYIHS---ADIIHRDLKPSNLAVNEDXE 174
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 159 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 186
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 143 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 170
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 31.6 bits (70), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 163
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 31.6 bits (70), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 163
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 31.6 bits (70), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 134 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 161
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 31.6 bits (70), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 138 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 165
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 31.6 bits (70), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDXE 163
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 31.6 bits (70), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 143 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 170
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 31.6 bits (70), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 141 RGLKYIHS---ADIIHRDLKPSNLAVNEDXE 168
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 31.6 bits (70), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 143 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 170
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 163
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 163
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 163
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 138 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 165
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 163
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 163
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 141 RGLKYIHS---ADIIHRDLKPSNLAVNEDXE 168
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 138 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 165
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 133 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 160
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 147 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 174
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 163
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 143 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 170
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 163
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 163
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 156 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 183
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 132 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 159
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 163
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 163
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 163
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 155 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 182
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 141 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 168
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 163
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 142 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 169
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 141 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 168
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 156 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 183
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 163
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 135 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 162
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 163
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 156 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 183
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 133 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 160
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 163
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 163
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 163
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 155 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 182
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 132 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 159
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 146 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 173
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 132 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 159
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 132 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 159
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 62/151 (41%), Gaps = 17/151 (11%)
Query: 297 ATDGFSNK---------NILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQFQTE 346
+TD FS + ++LG G +V L + AVK ++++ F+
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREV 61
Query: 347 VKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIA 406
+ HRN+L L F LV+ M GS+ S + +R+ + +
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH----FNELEASVVV 117
Query: 407 LGSARGLSYLHEHCDPKIIHRDVKAANILLD 437
A L +LH + I HRD+K NIL +
Sbjct: 118 QDVASALDFLH---NKGIAHRDLKPENILCE 145
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 62/151 (41%), Gaps = 17/151 (11%)
Query: 297 ATDGFSNK---------NILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQFQTE 346
+TD FS + ++LG G +V L + AVK ++++ F+
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREV 61
Query: 347 VKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIA 406
+ HRN+L L F LV+ M GS+ S + +R+ + +
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH----FNELEASVVV 117
Query: 407 LGSARGLSYLHEHCDPKIIHRDVKAANILLD 437
A L +LH + I HRD+K NIL +
Sbjct: 118 QDVASALDFLH---NKGIAHRDLKPENILCE 145
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 49/104 (47%), Gaps = 10/104 (9%)
Query: 340 ELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQS-SLPPL 397
E Q E+ + + H N+++L+ LV + G + R+++++ S
Sbjct: 49 EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEA 108
Query: 398 DWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
+ RK ++ +S++H D ++HRD+K N+L ++ D
Sbjct: 109 SYIMRKLVS-----AVSHMH---DVGVVHRDLKPENLLFTDEND 144
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 142 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 169
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 14/123 (11%)
Query: 323 GKLVAVKRLKEERTSGGELQF-QTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNG 381
G+ V V+R+ E S + F Q E+ + + H N++ E +V +M G
Sbjct: 52 GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYG 111
Query: 382 S----VASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD 437
S + + + + L I G + L Y+H +HR VKA++IL+
Sbjct: 112 SAKDLICTHFMDGMNEL------AIAYILQGVLKALDYIHHM---GYVHRSVKASHILIS 162
Query: 438 EDA 440
D
Sbjct: 163 VDG 165
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H IIHRD+K +N+ ++ED +
Sbjct: 142 RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 169
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 14/123 (11%)
Query: 323 GKLVAVKRLKEERTSGGELQF-QTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNG 381
G+ V V+R+ E S + F Q E+ + + H N++ E +V +M G
Sbjct: 36 GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYG 95
Query: 382 S----VASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD 437
S + + + + L I G + L Y+H +HR VKA++IL+
Sbjct: 96 SAKDLICTHFMDGMNEL------AIAYILQGVLKALDYIHHM---GYVHRSVKASHILIS 146
Query: 438 EDA 440
D
Sbjct: 147 VDG 149
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 29/150 (19%)
Query: 307 LGRGGFGKVYKGRLAD-GKLVAVKR--LKEERTSGGELQFQTEVKIISMAVHRNLLRLY- 362
LG GG G V+ D K VA+K+ L + ++ L+ E+KII H N+++++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALR---EIKIIRRLDHDNIVKVFE 75
Query: 363 -------------GFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGS 409
G T + +V YM +A+ L + PL +
Sbjct: 76 ILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQG-----PLLEEHARLFMYQL 129
Query: 410 ARGLSYLHEHCDPKIIHRDVKAANILLDED 439
RGL Y+H ++HRD+K AN+ ++ +
Sbjct: 130 LRGLKYIHS---ANVLHRDLKPANLFINTE 156
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 59/136 (43%), Gaps = 17/136 (12%)
Query: 307 LGRGGFG------KVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360
LG+G F KV G+ K++ K+L ++ + + E +I + H N++R
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKL----SARDHQKLEREARICRLLKHPNIVR 85
Query: 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
L+ + L++ +T G + + R+ ++I + LH H
Sbjct: 86 LHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQIL------EAVLHCH- 138
Query: 421 DPKIIHRDVKAANILL 436
++HRD+K N+LL
Sbjct: 139 QMGVVHRDLKPENLLL 154
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 301 FSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLL 359
F +GRGGFG V++ + D A+KR++ + EVK ++ H ++
Sbjct: 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 67
Query: 360 RLY-GFCTTVTEK 371
R + + T EK
Sbjct: 68 RYFNAWLETPPEK 80
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 112 PSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNN 153
P A +L +L +L L++N + + L L+ L+YLRLN+N
Sbjct: 193 PHAFRDLGRLMTLYLFANNLSMLPAEVLVPLRSLQYLRLNDN 234
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 306 ILGRGGFGKVY-KGRLADGKLVAVKRLKEE---RTSGGELQFQTEVKIISMAVHRNLLRL 361
+LG+G FGKV R +L AVK LK++ + E E +++++ L
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTM-VEKRVLALPGKPPFLTQ 85
Query: 362 YGFCTTVTEKL-LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
C ++L V Y+ G + +++ P +IA+G L +L
Sbjct: 86 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG----LFFLQSK- 140
Query: 421 DPKIIHRDVKAANILLDEDA 440
II+RD+K N++LD +
Sbjct: 141 --GIIYRDLKLDNVMLDSEG 158
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 25/147 (17%)
Query: 307 LGRGGFGKV---YKGRLADGKLVAVKRLKEERTSGGEL---QFQTEVKIISMAVHRNLLR 360
+G G +G V GR G VA+K+L R EL + E++++ H N++
Sbjct: 33 VGSGAYGAVCSAVDGRT--GAKVAIKKLY--RPFQSELFAKRAYRELRLLKHMRHENVIG 88
Query: 361 LYGFCT------TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414
L T T+ LV P+M G+ +L + + L + + +GL
Sbjct: 89 LLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEK----LGEDRIQFLVYQMLKGLR 142
Query: 415 YLHEHCDPKIIHRDVKAANILLDEDAD 441
Y+H IIHRD+K N+ ++ED +
Sbjct: 143 YIHAAG---IIHRDLKPGNLAVNEDCE 166
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 10/143 (6%)
Query: 299 DGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHR 356
D F LG G FG+V + + G A+K L +++ +++ K I AV+
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 357 NLLRLYGFCTTVTEKL-LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415
L F L +V Y+ G + S LR + P + A Y
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEY 143
Query: 416 LHEHCDPKIIHRDVKAANILLDE 438
LH +I+RD+K N+L+DE
Sbjct: 144 LH---SLDLIYRDLKPENLLIDE 163
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 306 ILGRGGFGKVY-KGRLADGKLVAVKRLKEE---RTSGGELQFQTEVKIISMAVHRNLLRL 361
+LG+G FGKV R +L AVK LK++ + E E +++++ L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTM-VEKRVLALPGKPPFLTQ 406
Query: 362 YGFCTTVTEKL-LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC 420
C ++L V Y+ G + +++ P +IA+G L +L
Sbjct: 407 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG----LFFLQSK- 461
Query: 421 DPKIIHRDVKAANILLDEDA 440
II+RD+K N++LD +
Sbjct: 462 --GIIYRDLKLDNVMLDSEG 479
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 10/143 (6%)
Query: 299 DGFSNKNILGRGGFGKVY-KGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHR 356
D F +G G FG+V + G A+K L +++ +++ K I AV+
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 357 NLLRLYGFCTTVTEKL-LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415
L F L +V YM G + S LR + P + A Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRR----IGRFSEPHARFYAAQIVLTFEY 156
Query: 416 LHEHCDPKIIHRDVKAANILLDE 438
LH +I+RD+K N+L+D+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQ 176
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H ++HRD+K +N+LL+ +D
Sbjct: 137 RGLKYIHS---ANVLHRDLKPSNLLLNTTSD 164
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 10/143 (6%)
Query: 299 DGFSNKNILGRGGFGKVY-KGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHR 356
D F +G G FG+V + G A+K L +++ +++ K I AV+
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 357 NLLRLYGFCTTVTEKL-LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415
L F L +V YM G + S LR + P + A Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRR----IGRFSEPHARFYAAQIVLTFEY 156
Query: 416 LHEHCDPKIIHRDVKAANILLDE 438
LH +I+RD+K N+L+D+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQ 176
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 24/139 (17%)
Query: 307 LGRGGFG--KVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGF 364
+G G FG ++ + + A+ +LVAVK + ER + + E+ H N++R
Sbjct: 27 IGAGNFGVARLMRDKQAN-ELVAVKYI--ERGEKIDENVKREIINHRSLRHPNIVRFKEV 83
Query: 365 CTTVTEKLLVYPYMTNGSV------ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE 418
T T +V Y + G + A R E ++ G+SY H
Sbjct: 84 ILTPTHLAIVMEYASGGELFERICNAGRFSEDEARF----------FFQQLISGVSYAHA 133
Query: 419 HCDPKIIHRDVKAANILLD 437
++ HRD+K N LLD
Sbjct: 134 M---QVAHRDLKLENTLLD 149
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Query: 412 GLSYLHEHCDPKIIHRDVKAANILLD 437
GL Y+H C IIH D+K N+L++
Sbjct: 143 GLDYMHRRC--GIIHTDIKPENVLME 166
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Query: 412 GLSYLHEHCDPKIIHRDVKAANILLD 437
GL Y+H C IIH D+K N+L++
Sbjct: 143 GLDYMHRRC--GIIHTDIKPENVLME 166
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 22/149 (14%)
Query: 299 DGFSNKNILGRGGFGKVYKGRLA----DGKLVAVKRLKEERTSGGE-------LQFQTEV 347
D + LG G G+V +LA K VA+K + + + + G L +TE+
Sbjct: 10 DEYIMSKTLGSGACGEV---KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 66
Query: 348 KIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIAL 407
+I+ H ++++ F + +V M G + ++ + L T K
Sbjct: 67 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR----LKEATCKLYFY 121
Query: 408 GSARGLSYLHEHCDPKIIHRDVKAANILL 436
+ YLHE+ IIHRD+K N+LL
Sbjct: 122 QMLLAVQYLHEN---GIIHRDLKPENVLL 147
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 22/149 (14%)
Query: 299 DGFSNKNILGRGGFGKVYKGRLA----DGKLVAVKRLKEERTSGGE-------LQFQTEV 347
D + LG G G+V +LA K VA+K + + + + G L +TE+
Sbjct: 10 DEYIMSKTLGSGACGEV---KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 66
Query: 348 KIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIAL 407
+I+ H ++++ F + +V M G + ++ + L T K
Sbjct: 67 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR----LKEATCKLYFY 121
Query: 408 GSARGLSYLHEHCDPKIIHRDVKAANILL 436
+ YLHE+ IIHRD+K N+LL
Sbjct: 122 QMLLAVQYLHEN---GIIHRDLKPENVLL 147
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%), Gaps = 4/31 (12%)
Query: 413 LSYLHEHCDPKIIHRDVKAANILLD-EDADQ 442
L Y+HEH + +H D+KA+N+LL+ ++ DQ
Sbjct: 165 LEYIHEH---EYVHGDIKASNLLLNYKNPDQ 192
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%), Gaps = 4/31 (12%)
Query: 413 LSYLHEHCDPKIIHRDVKAANILLD-EDADQ 442
L Y+HEH + +H D+KA+N+LL+ ++ DQ
Sbjct: 165 LEYIHEH---EYVHGDIKASNLLLNYKNPDQ 192
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 10/143 (6%)
Query: 299 DGFSNKNILGRGGFGKVY-KGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHR 356
D F LG G FG+V + G A+K L +++ +++ K I AV+
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 357 NLLRLYGFCTTVTEKL-LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415
L F L +V Y+ G + S LR + P + A Y
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEY 142
Query: 416 LHEHCDPKIIHRDVKAANILLDE 438
LH +I+RD+K N+L+D+
Sbjct: 143 LH---SLDLIYRDLKPENLLIDQ 162
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H ++HRD+K +N+LL+ D
Sbjct: 137 RGLKYIHS---ANVLHRDLKPSNLLLNTTCD 164
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%), Gaps = 3/25 (12%)
Query: 413 LSYLHEHCDPKIIHRDVKAANILLD 437
L Y+HEH + +H D+KA+N+LL+
Sbjct: 165 LEYIHEH---EYVHGDIKASNLLLN 186
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 22/149 (14%)
Query: 299 DGFSNKNILGRGGFGKVYKGRLA----DGKLVAVKRLKEERTSGGE-------LQFQTEV 347
D + LG G G+V +LA K VA+K + + + + G L +TE+
Sbjct: 9 DEYIMSKTLGSGACGEV---KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 65
Query: 348 KIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIAL 407
+I+ H ++++ F + +V M G + ++ + L T K
Sbjct: 66 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR----LKEATCKLYFY 120
Query: 408 GSARGLSYLHEHCDPKIIHRDVKAANILL 436
+ YLHE+ IIHRD+K N+LL
Sbjct: 121 QMLLAVQYLHEN---GIIHRDLKPENVLL 146
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H ++HRD+K +N+LL+ D
Sbjct: 139 RGLKYIHS---ANVLHRDLKPSNLLLNTTCD 166
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H ++HRD+K +N+LL+ D
Sbjct: 140 RGLKYIHS---ANVLHRDLKPSNLLLNTTCD 167
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 52/138 (37%), Gaps = 10/138 (7%)
Query: 305 NILGRGGFGKVYK------GRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNL 358
++G+G F V + G+ K+V V + E + E I M H ++
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTE-DLKREASICHMLKHPHI 88
Query: 359 LRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE 418
+ L ++ +V+ +M + + +R + L Y H
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH- 147
Query: 419 HCDPKIIHRDVKAANILL 436
D IIHRDVK N+LL
Sbjct: 148 --DNNIIHRDVKPENVLL 163
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H ++HRD+K +N+LL+ D
Sbjct: 141 RGLKYIHS---ANVLHRDLKPSNLLLNTTCD 168
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H ++HRD+K +N+LL+ D
Sbjct: 132 RGLKYIHS---ANVLHRDLKPSNLLLNTTCD 159
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H ++HRD+K +N+LL+ D
Sbjct: 155 RGLKYIHS---ANVLHRDLKPSNLLLNTTCD 182
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 22/149 (14%)
Query: 299 DGFSNKNILGRGGFGKVYKGRLA----DGKLVAVKRLKEERTSGGE-------LQFQTEV 347
D + LG G G+V +LA K VA+K + + + + G L +TE+
Sbjct: 16 DEYIMSKTLGSGACGEV---KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 72
Query: 348 KIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIAL 407
+I+ H ++++ F + +V M G + ++ + L T K
Sbjct: 73 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR----LKEATCKLYFY 127
Query: 408 GSARGLSYLHEHCDPKIIHRDVKAANILL 436
+ YLHE+ IIHRD+K N+LL
Sbjct: 128 QMLLAVQYLHEN---GIIHRDLKPENVLL 153
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H ++HRD+K +N+LL+ D
Sbjct: 139 RGLKYIHS---ANVLHRDLKPSNLLLNTTCD 166
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H ++HRD+K +N+LL+ D
Sbjct: 135 RGLKYIHS---ANVLHRDLKPSNLLLNTTCD 162
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H ++HRD+K +N+LL+ D
Sbjct: 137 RGLKYIHS---ANVLHRDLKPSNLLLNTTCD 164
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H ++HRD+K +N+LL+ D
Sbjct: 133 RGLKYIHS---ANVLHRDLKPSNLLLNTTCD 160
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 10/143 (6%)
Query: 299 DGFSNKNILGRGGFGKVY-KGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHR 356
D F LG G FG+V + G A+K L +++ +++ K I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 357 NLLRLYGFCTTVTEKL-LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415
L F L +V Y+ G + S LR + P + A Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEY 156
Query: 416 LHEHCDPKIIHRDVKAANILLDE 438
LH +I+RD+K N+L+D+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQ 176
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H ++HRD+K +N+LL+ D
Sbjct: 139 RGLKYIHS---ANVLHRDLKPSNLLLNTTCD 166
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 26/92 (28%)
Query: 111 IPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNXXXXXXXXXXXXXXXXX 170
IP L + L +LD N +GT+P ++++L L + +
Sbjct: 117 IPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFD------------------- 157
Query: 171 XXXXXNNRLSGPVPDN-GSFSQ-FTPISFENN 200
NR+SG +PD+ GSFS+ FT ++ N
Sbjct: 158 -----GNRISGAIPDSYGSFSKLFTSMTISRN 184
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H ++HRD+K +N+LL+ D
Sbjct: 133 RGLKYIHS---ANVLHRDLKPSNLLLNTTCD 160
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H ++HRD+K +N+LL+ D
Sbjct: 143 RGLKYIHS---ANVLHRDLKPSNLLLNTTCD 170
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H ++HRD+K +N+LL+ D
Sbjct: 135 RGLKYIHS---ANVLHRDLKPSNLLLNTTCD 162
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H ++HRD+K +N+LL+ D
Sbjct: 139 RGLKYIHS---ANVLHRDLKPSNLLLNTTCD 166
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 22/149 (14%)
Query: 299 DGFSNKNILGRGGFGKVYKGRLA----DGKLVAVKRLKEERTSGGE-------LQFQTEV 347
D + LG G G+V +LA K VA+K + + + + G L +TE+
Sbjct: 10 DEYIMSKTLGSGACGEV---KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 66
Query: 348 KIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIAL 407
+I+ H ++++ F + +V M G + ++ + L T K
Sbjct: 67 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR----LKEATCKLYFY 121
Query: 408 GSARGLSYLHEHCDPKIIHRDVKAANILL 436
+ YLHE+ IIHRD+K N+LL
Sbjct: 122 QMLLAVQYLHEN---GIIHRDLKPENVLL 147
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H ++HRD+K +N+LL+ D
Sbjct: 140 RGLKYIHS---ANVLHRDLKPSNLLLNTTCD 167
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 28.9 bits (63), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Query: 307 LGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGG-ELQFQTEVKIISMAVH-RNLLRLYG 363
LGRG F V + + G+ A K LK+ R + E+ ++ +A ++ L+
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96
Query: 364 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTR--KKIALGSARGLSYLHEHCD 421
+E +L+ Y G + S + + + R K+I G+ YLH++
Sbjct: 97 VYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQIL----EGVYYLHQN-- 150
Query: 422 PKIIHRDVKAANILL 436
I+H D+K NILL
Sbjct: 151 -NIVHLDLKPQNILL 164
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H ++HRD+K +N+LL+ D
Sbjct: 155 RGLKYIHS---ANVLHRDLKPSNLLLNTTXD 182
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H ++HRD+K +N+LL+ D
Sbjct: 135 RGLKYIHS---ANVLHRDLKPSNLLLNTTXD 162
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H ++HRD+K +N+LL+ D
Sbjct: 139 RGLKYIHS---ANVLHRDLKPSNLLLNTTXD 166
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H ++HRD+K +N+LL+ D
Sbjct: 135 RGLKYIHS---ANVLHRDLKPSNLLLNTTXD 162
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H ++HRD+K +N+LL+ D
Sbjct: 139 RGLKYIHS---ANVLHRDLKPSNLLLNTTXD 166
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H ++HRD+K +N+LL+ D
Sbjct: 135 RGLKYIHS---ANVLHRDLKPSNLLLNTTXD 162
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 22/149 (14%)
Query: 299 DGFSNKNILGRGGFGKVYKGRLA----DGKLVAVKRLKEERTSGGE-------LQFQTEV 347
D + LG G G+V +LA K VA++ + + + + G L +TE+
Sbjct: 149 DEYIMSKTLGSGACGEV---KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEI 205
Query: 348 KIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIAL 407
+I+ H ++++ F + +V M G + ++ + L T K
Sbjct: 206 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR----LKEATCKLYFY 260
Query: 408 GSARGLSYLHEHCDPKIIHRDVKAANILL 436
+ YLHE+ IIHRD+K N+LL
Sbjct: 261 QMLLAVQYLHEN---GIIHRDLKPENVLL 286
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
+GL Y+H ++HRD+K N+ ++ED +
Sbjct: 155 KGLKYIH---SAGVVHRDLKPGNLAVNEDCE 182
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 10/143 (6%)
Query: 299 DGFSNKNILGRGGFGKVY-KGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHR 356
D F LG G FG+V + G A+K L +++ +++ K I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 357 NLLRLYGFCTTVTEKL-LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415
L F L +V Y+ G + S LR + P + A Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEY 157
Query: 416 LHEHCDPKIIHRDVKAANILLDE 438
LH +I+RD+K N+L+D+
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQ 177
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 10/143 (6%)
Query: 299 DGFSNKNILGRGGFGKVY-KGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHR 356
D F LG G FG+V + G A+K L +++ +++ K I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 357 NLLRLYGFCTTVTEKL-LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415
L F L +V Y+ G + S LR + P + A Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEY 157
Query: 416 LHEHCDPKIIHRDVKAANILLDE 438
LH +I+RD+K N+L+D+
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQ 177
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 10/143 (6%)
Query: 299 DGFSNKNILGRGGFGKVY-KGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHR 356
D F LG G FG+V + G A+K L +++ +++ K I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 357 NLLRLYGFCTTVTEKL-LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415
L F L +V Y+ G + S LR + P + A Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEY 156
Query: 416 LHEHCDPKIIHRDVKAANILLDE 438
LH +I+RD+K N+L+D+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQ 176
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 10/143 (6%)
Query: 299 DGFSNKNILGRGGFGKVY-KGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHR 356
D F LG G FG+V + G A+K L +++ +++ K I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 357 NLLRLYGFCTTVTEKL-LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415
L F L +V Y+ G + S LR + P + A Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEY 156
Query: 416 LHEHCDPKIIHRDVKAANILLDE 438
LH +I+RD+K N+L+D+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQ 176
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 28.5 bits (62), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
+GL Y+H ++HRD+K N+ ++ED +
Sbjct: 137 KGLKYIH---SAGVVHRDLKPGNLAVNEDCE 164
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 28.5 bits (62), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 57/143 (39%), Gaps = 10/143 (6%)
Query: 299 DGFSNKNILGRGGFGKVY-KGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHR 356
D F LG G FG+V + G A+K L +++ E++ K I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 357 NLLRLYGFCTTVTEKL-LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415
L F L +V Y G + S LR + P + A Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEY 156
Query: 416 LHEHCDPKIIHRDVKAANILLDE 438
LH +I+RD+K N+++D+
Sbjct: 157 LH---SLDLIYRDLKPENLMIDQ 176
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 28.5 bits (62), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 10/143 (6%)
Query: 299 DGFSNKNILGRGGFGKVY-KGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHR 356
D F LG G FG+V + G A+K L +++ +++ K I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 357 NLLRLYGFCTTVTEKL-LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415
L F L +V Y+ G + S LR + P + A Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEY 156
Query: 416 LHEHCDPKIIHRDVKAANILLDE 438
LH +I+RD+K N+L+D+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQ 176
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 24/139 (17%)
Query: 307 LGRGGFG--KVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGF 364
+G G FG ++ + + ++ +LVAVK + ER + + E+ H N++R
Sbjct: 27 IGSGNFGVARLMRDKQSN-ELVAVKYI--ERGEKIDENVKREIINHRSLRHPNIVRFKEV 83
Query: 365 CTTVTEKLLVYPYMTNGSV------ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE 418
T T +V Y + G + A R E ++ G+SY H
Sbjct: 84 ILTPTHLAIVMEYASGGELFERICNAGRFSEDEARF----------FFQQLISGVSYCHA 133
Query: 419 HCDPKIIHRDVKAANILLD 437
++ HRD+K N LLD
Sbjct: 134 M---QVCHRDLKLENTLLD 149
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 22/149 (14%)
Query: 299 DGFSNKNILGRGGFGKVYKGRLA----DGKLVAVKRLKEERTSGGE-------LQFQTEV 347
D + LG G G+V +LA K VA++ + + + + G L +TE+
Sbjct: 135 DEYIMSKTLGSGACGEV---KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEI 191
Query: 348 KIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIAL 407
+I+ H ++++ F + +V M G + ++ + L T K
Sbjct: 192 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR----LKEATCKLYFY 246
Query: 408 GSARGLSYLHEHCDPKIIHRDVKAANILL 436
+ YLHE+ IIHRD+K N+LL
Sbjct: 247 QMLLAVQYLHEN---GIIHRDLKPENVLL 272
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 28.5 bits (62), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 24/139 (17%)
Query: 307 LGRGGFG--KVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGF 364
+G G FG ++ + + ++ +LVAVK + ER + + E+ H N++R
Sbjct: 26 IGSGNFGVARLMRDKQSN-ELVAVKYI--ERGEKIDENVKREIINHRSLRHPNIVRFKEV 82
Query: 365 CTTVTEKLLVYPYMTNGSV------ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE 418
T T +V Y + G + A R E ++ G+SY H
Sbjct: 83 ILTPTHLAIVMEYASGGELFERICNAGRFSEDEARF----------FFQQLISGVSYCHA 132
Query: 419 HCDPKIIHRDVKAANILLD 437
++ HRD+K N LLD
Sbjct: 133 M---QVCHRDLKLENTLLD 148
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 28.5 bits (62), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 24/139 (17%)
Query: 307 LGRGGFG--KVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGF 364
+G G FG ++ + + ++ +LVAVK + ER + + E+ H N++R
Sbjct: 27 IGSGNFGVARLMRDKQSN-ELVAVKYI--ERGEKIDENVKREIINHRSLRHPNIVRFKEV 83
Query: 365 CTTVTEKLLVYPYMTNGSV------ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE 418
T T +V Y + G + A R E ++ G+SY H
Sbjct: 84 ILTPTHLAIVMEYASGGELFERICNAGRFSEDEARF----------FFQQLISGVSYCHA 133
Query: 419 HCDPKIIHRDVKAANILLD 437
++ HRD+K N LLD
Sbjct: 134 M---QVCHRDLKLENTLLD 149
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 28.5 bits (62), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441
RGL Y+H ++HRD+K +N+L++ D
Sbjct: 155 RGLKYIHS---ANVLHRDLKPSNLLINTTCD 182
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 28.5 bits (62), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 57/143 (39%), Gaps = 10/143 (6%)
Query: 299 DGFSNKNILGRGGFGKVY-KGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHR 356
D F LG G FG+V + G A+K L +++ E++ K I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 357 NLLRLYGFCTTVTEKL-LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415
L F L +V Y G + S LR + P + A Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEY 156
Query: 416 LHEHCDPKIIHRDVKAANILLDE 438
LH +I+RD+K N+++D+
Sbjct: 157 LH---SLDLIYRDLKPENLMIDQ 176
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 10/143 (6%)
Query: 299 DGFSNKNILGRGGFGKVY-KGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHR 356
D F LG G FG+V + G A+K L +++ +++ K I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 357 NLLRLYGFCTTVTEKL-LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415
L F L +V Y+ G + S LR + P + A Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR----IGRFXEPHARFYAAQIVLTFEY 156
Query: 416 LHEHCDPKIIHRDVKAANILLDE 438
LH +I+RD+K N+L+D+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQ 176
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 28.5 bits (62), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 10/143 (6%)
Query: 299 DGFSNKNILGRGGFGKVY-KGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHR 356
D F LG G FG+V + G A+K L +++ +++ K I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 357 NLLRLYGFCTTVTEKL-LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415
L F L +V Y+ G + S LR + P + A Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR----IGRFXEPHARFYAAQIVLTFEY 157
Query: 416 LHEHCDPKIIHRDVKAANILLDE 438
LH +I+RD+K N+L+D+
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQ 177
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 28.1 bits (61), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 66/161 (40%), Gaps = 20/161 (12%)
Query: 293 ELQVATDGFSNKNILGR----GGFGKVY-----KGRLADGKLVAVKRLKEERTSGGELQF 343
E +V D N+ +LG+ GGFG +Y D + V +E EL+F
Sbjct: 27 EGKVLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKF 86
Query: 344 QTEV---KIISMAVHRNLLRLYG----FCTTVTE-KLLVYPYMTNGSVASRLRERQSSLP 395
V I + R L G + + +TE K Y +M + L++
Sbjct: 87 YQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG 146
Query: 396 PLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL 436
T ++ + L Y+HE+ + +H D+KAAN+LL
Sbjct: 147 TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLL 184
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 28.1 bits (61), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 28/141 (19%)
Query: 307 LGRGGFG--KVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV--HRNLLRLY 362
+G G FG ++ + + ++ +LVAVK ++ G ++ + +II+ H N++R
Sbjct: 27 IGSGNFGVARLMRDKQSN-ELVAVKYIER----GEKIAANVKREIINHRSLRHPNIVRFK 81
Query: 363 GFCTTVTEKLLVYPYMTNGSV------ASRLRERQSSLPPLDWPTRKKIALGSARGLSYL 416
T T +V Y + G + A R E ++ G+SY
Sbjct: 82 EVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARF----------FFQQLISGVSYC 131
Query: 417 HEHCDPKIIHRDVKAANILLD 437
H ++ HRD+K N LLD
Sbjct: 132 HAM---QVCHRDLKLENTLLD 149
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 28.1 bits (61), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 10/143 (6%)
Query: 299 DGFSNKNILGRGGFGKVY-KGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHR 356
D F LG G FG+V + G A+K L +++ +++ K I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 357 NLLRLYGFCTTVTEKL-LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415
L F L +V Y+ G + S LR + P + A Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFXEPHARFYAAQIVLTFEY 156
Query: 416 LHEHCDPKIIHRDVKAANILLDE 438
LH +I+RD+K N+L+D+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQ 176
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 28.1 bits (61), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 10/143 (6%)
Query: 299 DGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHR 356
D F LG G FG+V + + G A+K L +++ +++ K I AV+
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 357 NLLRLYGFCTTVTEKL-LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415
L F L +V Y+ G + S LR + P + A Y
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEY 149
Query: 416 LHEHCDPKIIHRDVKAANILLDE 438
LH +I+RD+K N+L+D+
Sbjct: 150 LH---SLDLIYRDLKPENLLIDQ 169
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 28.1 bits (61), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 10/143 (6%)
Query: 299 DGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHR 356
D F LG G FG+V + + G A+K L +++ +++ K I AV+
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 357 NLLRLYGFCTTVTEKL-LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415
L F L +V Y+ G + S LR + P + A Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEY 157
Query: 416 LHEHCDPKIIHRDVKAANILLDE 438
LH +I+RD+K N+L+D+
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQ 177
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,202,446
Number of Sequences: 62578
Number of extensions: 347280
Number of successful extensions: 2635
Number of sequences better than 100.0: 983
Number of HSP's better than 100.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 775
Number of HSP's that attempted gapping in prelim test: 1530
Number of HSP's gapped (non-prelim): 1052
length of query: 451
length of database: 14,973,337
effective HSP length: 102
effective length of query: 349
effective length of database: 8,590,381
effective search space: 2998042969
effective search space used: 2998042969
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)